RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PTK7 (Homo sapiens)

Ensembl gene IDs: ENSG00000112655

Ensembl transcript IDs: ENST00000230418.8, ENST00000230419.9, ENST00000345201.6, ENST00000349241.6, ENST00000352931.6, ENST00000461100.5, ENST00000461389.1, ENST00000470019.5, ENST00000470471.1, ENST00000471863.5, ENST00000473339.1, ENST00000476760.1, ENST00000481273.5, ENST00000481946.5, ENST00000487673.5, ENST00000489707.5, ENST00000490710.1, ENST00000493339.1, ENST00000494146.5, ENST00000497957.1

Found 1954 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGGCCAACACCAGCTCGTGGCCCTTCTGGTAGACCCTGCCATGGGTaGGCAGCCGGACTCCCGCGTGCTCCCACCACACGCTGGGCTCTG +
Preference number: 1 (lower is better)
Translates to: WPTPARGPSGRPCHG*AAGLPRAPTTRWAL
Trigger: CAGAGCCCAGCGTGTGGTGGGAGCACGCGGGAGTCCGGCTGCCCACCCATGGCAGGGTCTACCAGAAGGGCCACGAGCTGGTGTTGGCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470019.5
3UTR GCA 90 bp GATGGGTGGGCCCCTCTGCCCCTGGCCAATGCAGCGGTAGATCCCTaGATTGCGTGGCCGGACCTGGGTCAGCAGCAGAGACCCGTTGGC +
Preference number: 1 (lower is better)
Translates to: DGWAPLPLANAAVDP*IAWPDLGQQQRPVG
Trigger: GCCAACGGGTCTCTGCTGCTGACCCAGGTCCGGCCACGCAATGCAGGGATCTACCGCTGCATTGGCCAGGGGCAGAGGGGCCCACCCATC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470019.5
3UTR GCA 90 bp GTGGGCCCCTCTGCCCCTGGCCAATGCAGCGGTAGATCCCTGCATTaGGTGGCCGGACCTGGGTCAGCAGCAGAGACCCGTTGGCAAACA +
Preference number: 1 (lower is better)
Translates to: VGPSAPGQCSGRSLH*VAGPGSAAETRWQT
Trigger: TGTTTGCCAACGGGTCTCTGCTGCTGACCCAGGTCCGGCCACGCAATGCAGGGATCTACCGCTGCATTGGCCAGGGGCAGAGGGGCCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470019.5
3UTR GCA 90 bp CAGCAATATTGGCCAACACCAGCTCGTGGCCCTTCTGGTAGACCCTaGCATGGGTGGGCAGCCGGACTCCCGCGTGCTCCCACCACACGC +
Preference number: 1 (lower is better)
Translates to: QQYWPTPARGPSGRP*HGWAAGLPRAPTTR
Trigger: GCGTGTGGTGGGAGCACGCGGGAGTCCGGCTGCCCACCCATGGCAGGGTCTACCAGAAGGGCCACGAGCTGGTGTTGGCCAATATTGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470019.5
3UTR CCA 90 bp TGGGGTCCAGGATGCGGTCCTTGCCTTTCCACTGAATCAGCGGCTTaGGGTCCCCCTGGGCCTCGCACTGCAGTAGGGCTGTGTGGCCCT +
Preference number: 1 (lower is better)
Translates to: WGPGCGPCLSTESAA*GPPGPRTAVGLCGP
Trigger: AGGGCCACACAGCCCTACTGCAGTGCGAGGCCCAGGGGGACCCCAAGCCGCTGATTCAGTGGAAAGGCAAGGACCGCATCCTGGACCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470019.5
3UTR CCA 90 bp GCCCCTCTGCCCCTGGCCAATGCAGCGGTAGATCCCTGCATTGCGTaGCCGGACCTGGGTCAGCAGCAGAGACCCGTTGGCAAACACTGT +
Preference number: 1 (lower is better)
Translates to: APLPLANAAVDPCIA*PDLGQQQRPVGKHC
Trigger: ACAGTGTTTGCCAACGGGTCTCTGCTGCTGACCCAGGTCCGGCCACGCAATGCAGGGATCTACCGCTGCATTGGCCAGGGGCAGAGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470019.5
3UTR CCA 90 bp TTGTGCTGTGGCGTTTGTTGGTGGCCGCGGGGCCGGAGCCCAAGCTaGTCAAGGCCACTTCTTCTTGGATCTCTGCTGAGGGCTGCCCGT +
Preference number: 1 (lower is better)
Translates to: LCCGVCWWPRGRSPS*SRPLLLGSLLRAAR
Trigger: ACGGGCAGCCCTCAGCAGAGATCCAAGAAGAAGTGGCCTTGACCAGCTTGGGCTCCGGCCCCGCGGCCACCAACAAACGCCACAGCACAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
3UTR GCA 90 bp CCAGCACTTGGACACGGGCTTGCGCCTCGATGCTGCCGGCTGGGGTaGTGCTCATACAACGGTACCATGTCCCATCATACACCTCCACGC +
Preference number: 1 (lower is better)
Translates to: PALGHGLAPRCCRLG*CSYNGTMSHHTPPR
Trigger: GCGTGGAGGTGTATGATGGGACATGGTACCGTTGTATGAGCAGCACCCCAGCCGGCAGCATCGAGGCGCAAGCCCGTGTCCAAGTGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470019.5
3UTR CCA 90 bp GGCTGCAGGCTAGACCGTGGGAAGTGCATCTTATCACTTGTGCTGTaGCGTTTGTTGGTGGCCGCGGGGCCGGAGCCCAAGCTGGTCAAG +
Preference number: 1 (lower is better)
Translates to: GCRLDRGKCILSLVL*RLLVAAGPEPKLVK
Trigger: CTTGACCAGCTTGGGCTCCGGCCCCGCGGCCACCAACAAACGCCACAGCACAAGTGATAAGATGCACTTCCCACGGTCTAGCCTGCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
3UTR CCA 90 bp ACTGCAGGCTCGGGGGTGGCTGGGCTGAGAACTGGCAATGGAACATaGCCTCCTCATACCTCGCTACTACCACGTCCTGGGGTGCCAGCA +
Preference number: 1 (lower is better)
Translates to: TAGSGVAGLRTGNGT*PPHTSLLPRPGVPA
Trigger: TGCTGGCACCCCAGGACGTGGTAGTAGCGAGGTATGAGGAGGCCATGTTCCATTGCCAGTTCTCAGCCCAGCCACCCCCGAGCCTGCAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470019.5
3UTR GCA 90 bp CTCTTCCCCAGCGTGGTGATGGGCTGCAGGCTAGACCGTGGGAAGTaGATCTTATCACTTGTGCTGTGGCGTTTGTTGGTGGCCGCGGGG +
Preference number: 1 (lower is better)
Translates to: LFPSVVMGCRLDRGK*ILSLVLWRLLVAAG
Trigger: CCCCGCGGCCACCAACAAACGCCACAGCACAAGTGATAAGATGCACTTCCCACGGTCTAGCCTGCAGCCCATCACCACGCTGGGGAAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
3UTR GCA 90 bp GCACTTGGACACGGGCTTGCGCCTCGATGCTGCCGGCTGGGGTGCTaGTCATACAACGGTACCATGTCCCATCATACACCTCCACGCTGT +
Preference number: 1 (lower is better)
Translates to: ALGHGLAPRCCRLGC*SYNGTMSHHTPPRC
Trigger: ACAGCGTGGAGGTGTATGATGGGACATGGTACCGTTGTATGAGCAGCACCCCAGCCGGCAGCATCGAGGCGCAAGCCCGTGTCCAAGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470019.5
3UTR GCA 90 bp CACGAATCTGGCCCTGCGGCCCGTTGGAGGCAATGCAAGTGTAGTTaGCAGCGTCATCTCGAGTCACCCGGGCAAAATGCAGGGTCCCAG +
Preference number: 1 (lower is better)
Translates to: HESGPAARWRQCKCS*QRHLESPGQNAGSQ
Trigger: CTGGGACCCTGCATTTTGCCCGGGTGACTCGAGATGACGCTGGCAACTACACTTGCATTGCCTCCAACGGGCCGCAGGGCCAGATTCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470019.5
3UTR TCA 90 bp GCCGGAGCCCAAGCTGGTCAAGGCCACTTCTTCTTGGATCTCTGCTaGGGGCTGCCCGTTCTGCAAAGGCCCACCGTTGAGGCATTCCAT +
Preference number: 1 (lower is better)
Translates to: AGAQAGQGHFFLDLC*GLPVLQRPTVEAFH
Trigger: ATGGAATGCCTCAACGGTGGGCCTTTGCAGAACGGGCAGCCCTCAGCAGAGATCCAAGAAGAAGTGGCCTTGACCAGCTTGGGCTCCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
3UTR GCA 90 bp GGGCGACTGCGGTTAGTGATGGGAGTCTCATCCTCAAAGAGCCACTaGAGGCTCGGGGGTGGCTGGGCTGAGAACTGGCAATGGAACATG +
Preference number: 1 (lower is better)
Translates to: GRLRLVMGVSSSKSH*RLGGGWAENWQWNM
Trigger: CATGTTCCATTGCCAGTTCTCAGCCCAGCCACCCCCGAGCCTGCAGTGGCTCTTTGAGGATGAGACTCCCATCACTAACCGCAGTCGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470019.5
3UTR GCA 90 bp GCTGGACATGGGCACGAATCTGGCCCTGCGGCCCGTTGGAGGCAATaGAAGTGTAGTTGCCAGCGTCATCTCGAGTCACCCGGGCAAAAT +
Preference number: 1 (lower is better)
Translates to: AGHGHESGPAARWRQ*KCSCQRHLESPGQN
Trigger: ATTTTGCCCGGGTGACTCGAGATGACGCTGGCAACTACACTTGCATTGCCTCCAACGGGCCGCAGGGCCAGATTCGTGCCCATGTCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470019.5
3UTR CCA 90 bp CCAGGCAGTTACGCGCAGCCAAGTCCTTATGCACAAAGCGGTTGTTaGACAGGTGCTCCATGCCCAGGGCTACCTGGGTGCATAGGGCCA +
Preference number: 1 (lower is better)
Translates to: PGSYAQPSPYAQSGC*TGAPCPGLPGCIGP
Trigger: TGGCCCTATGCACCCAGGTAGCCCTGGGCATGGAGCACCTGTCCAACAACCGCTTTGTGCATAAGGACTTGGCTGCGCGTAACTGCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
3UTR CCA 90 bp AGGCTGGGGCTACAGTTACCAGATACTAAGTGCCTGCCTGGTCCCTaGCAGGTCAAGTCTGACACTTGGCCAAGGGCTCGGCCGCCCTTT +
Preference number: 1 (lower is better)
Translates to: RLGLQLPDTKCLPGP*QVKSDTWPRARPPF
Trigger: AAAGGGCGGCCGAGCCCTTGGCCAAGTGTCAGACTTGACCTGCCAGGGACCAGGCAGGCACTTAGTATCTGGTAACTGTAGCCCCAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476760.1
3UTR CCA 90 bp TCCTCAAAGAGCCACTGCAGGCTCGGGGGTGGCTGGGCTGAGAACTaGCAATGGAACATGGCCTCCTCATACCTCGCTACTACCACGTCC +
Preference number: 1 (lower is better)
Translates to: SSKSHCRLGGGWAEN*QWNMASSYLATTTS
Trigger: GGACGTGGTAGTAGCGAGGTATGAGGAGGCCATGTTCCATTGCCAGTTCTCAGCCCAGCCACCCCCGAGCCTGCAGTGGCTCTTTGAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470019.5
3UTR GCA 90 bp CAGCCAAGTCCTTATGCACAAAGCGGTTGTTGGACAGGTGCTCCATaGCCAGGGCTACCTGGGTGCATAGGGCCACCTTCTGCTTGGTGC +
Preference number: 1 (lower is better)
Translates to: QPSPYAQSGCWTGAP*PGLPGCIGPPSAWC
Trigger: GCACCAAGCAGAAGGTGGCCCTATGCACCCAGGTAGCCCTGGGCATGGAGCACCTGTCCAACAACCGCTTTGTGCATAAGGACTTGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
3UTR GCA 90 bp TGTCTCTGGGCACTGACCAGGCAGTTACGCGCAGCCAAGTCCTTATaGACAAAGCGGTTGTTGGACAGGTGCTCCATGCCCAGGGCTACC +
Preference number: 1 (lower is better)
Translates to: CLWALTRQLRAAKSL*TKRLLDRCSMPRAT
Trigger: GGTAGCCCTGGGCATGGAGCACCTGTCCAACAACCGCTTTGTGCATAAGGACTTGGCTGCGCGTAACTGCCTGGTCAGTGCCCAGAGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
3UTR GCA 90 bp AAGCCCTGGAGGCTGAGGCTGGGGCTACAGTTACCAGATACTAAGTaGCTGCCTGGTCCCTGGCAGGTCAAGTCTGACACTTGGCCAAGG +
Preference number: 1 (lower is better)
Translates to: KPWRLRLGLQLPDTK*LPGPWQVKSDTWPR
Trigger: CCTTGGCCAAGTGTCAGACTTGACCTGCCAGGGACCAGGCAGGCACTTAGTATCTGGTAACTGTAGCCCCAGCCTCAGCCTCCAGGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476760.1
3UTR GCA 90 bp CTGCTCATCCTTGCTCTGCAGGCTCTTCACAAGTACCAGGGTCTCTaGCACTCCCTCCTCCAAGCCCTGAGCCTTTGCCAGGAACACCTC +
Preference number: 1 (lower is better)
Translates to: LLILALQALHKYQGL*HSLLQALSLCQEHL
Trigger: GAGGTGTTCCTGGCAAAGGCTCAGGGCTTGGAGGAGGGAGTGGCAGAGACCCTGGTACTTGTGAAGAGCCTGCAGAGCAAGGATGAGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470019.5
ENST00000497957.1
3UTR CCA 90 bp ACCGTGGGAAGTGCATCTTATCACTTGTGCTGTGGCGTTTGTTGGTaGCCGCGGGGCCGGAGCCCAAGCTGGTCAAGGCCACTTCTTCTT +
Preference number: 1 (lower is better)
Translates to: TVGSASYHLCCGVCW*PRGRSPSWSRPLLL
Trigger: AAGAAGAAGTGGCCTTGACCAGCTTGGGCTCCGGCCCCGCGGCCACCAACAAACGCCACAGCACAAGTGATAAGATGCACTTCCCACGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
3UTR CCA 90 bp GATACTAAGTGCCTGCCTGGTCCCTGGCAGGTCAAGTCTGACACTTaGCCAAGGGCTCGGCCGCCCTTTCCATTTGCACAAGCATGCAGC +
Preference number: 1 (lower is better)
Translates to: DTKCLPGPWQVKSDT*PRARPPFPFAQACS
Trigger: GCTGCATGCTTGTGCAAATGGAAAGGGCGGCCGAGCCCTTGGCCAAGTGTCAGACTTGACCTGCCAGGGACCAGGCAGGCACTTAGTATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476760.1
3UTR CCA 90 bp CTTTTCCAGCACTTGGACACGGGCTTGCGCCTCGATGCTGCCGGCTaGGGTGCTGCTCATACAACGGTACCATGTCCCATCATACACCTC +
Preference number: 1 (lower is better)
Translates to: LFQHLDTGLRLDAAG*GAAHTTVPCPIIHL
Trigger: GAGGTGTATGATGGGACATGGTACCGTTGTATGAGCAGCACCCCAGCCGGCAGCATCGAGGCGCAAGCCCGTGTCCAAGTGCTGGAAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470019.5
3UTR TCA 90 bp AGTCTCATCCTCAAAGAGCCACTGCAGGCTCGGGGGTGGCTGGGCTaGGAACTGGCAATGGAACATGGCCTCCTCATACCTCGCTACTAC +
Preference number: 1 (lower is better)
Translates to: SLILKEPLQARGWLG*ELAMEHGLLIPRYY
Trigger: GTAGTAGCGAGGTATGAGGAGGCCATGTTCCATTGCCAGTTCTCAGCCCAGCCACCCCCGAGCCTGCAGTGGCTCTTTGAGGATGAGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470019.5
3UTR GCA 90 bp GGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTaGTGTGTCCTCTATAATCCTGGTCTAGACCCCCAAGTGGGACCA +
Preference number: 1 (lower is better)
Translates to: GSGSVCTSPEWGGLT*CVLYNPGLDPQVGP
Trigger: TGGTCCCACTTGGGGGTCTAGACCAGGATTATAGAGGACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
3UTR GCA 90 bp GAGGAAAGGAGAGAAGGGTGGGGAAGACGTGGGTCTGGGTCAGTGTaGACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTCCTCTAT +
Preference number: 1 (lower is better)
Translates to: EERREGWGRRGSGSV*TSPEWGGLTCCVLY
Trigger: ATAGAGGACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTCCCCACCCTTCTCTCCTTTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
3UTR GCA 90 bp GTGGCTGAACAGGGCACCGTGGCCTCCTTGTCAAACTCCATGCACTaGTGTGGCTGGGGTGGTGGTGTGAACTTGAGCTTTTCCAGCACT +
Preference number: 1 (lower is better)
Translates to: VAEQGTVASLSNSMH*CGWGGGVNLSFSST
Trigger: AGTGCTGGAAAAGCTCAAGTTCACACCACCACCCCAGCCACAGCAGTGCATGGAGTTTGACAAGGAGGCCACGGTGCCCTGTTCAGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470019.5
3UTR GCA 90 bp ACATCTCCAACTCCCTCCGGAAGTCCAGCTGCTGCTGCTCATCCTTaGTCTGCAGGCTCTTCACAAGTACCAGGGTCTCTGCCACTCCCT +
Preference number: 1 (lower is better)
Translates to: TSPTPSGSPAAAAHP*SAGSSQVPGSLPLP
Trigger: AGGGAGTGGCAGAGACCCTGGTACTTGTGAAGAGCCTGCAGAGCAAGGATGAGCAGCAGCAGCTGGACTTCCGGAGGGAGTTGGAGATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470019.5
ENST00000497957.1
3UTR CCA 90 bp GGGTGGGGAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTaGGGAGGACTCACTTGCTGTGTCCTCTATAATCCTGGTCTAGAC +
Preference number: 1 (lower is better)
Translates to: GWGRRGSGSVCTSPE*GGLTCCVLYNPGLD
Trigger: GTCTAGACCAGGATTATAGAGGACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTCCCCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
3UTR CCA 90 bp CACCGTGGCCTCCTTGTCAAACTCCATGCACTGCTGTGGCTGGGGTaGTGGTGTGAACTTGAGCTTTTCCAGCACTTGGACACGGGCTTG +
Preference number: 1 (lower is better)
Translates to: HRGLLVKLHALLWLG*WCELELFQHLDTGL
Trigger: CAAGCCCGTGTCCAAGTGCTGGAAAAGCTCAAGTTCACACCACCACCCCAGCCACAGCAGTGCATGGAGTTTGACAAGGAGGCCACGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470019.5
3UTR GCA 90 bp AGCTTCCCAAACATCTCCAACTCCCTCCGGAAGTCCAGCTGCTGCTaGTCATCCTTGCTCTGCAGGCTCTTCACAAGTACCAGGGTCTCT +
Preference number: 1 (lower is better)
Translates to: SFPNISNSLRKSSCC*SSLLCRLFTSTRVS
Trigger: AGAGACCCTGGTACTTGTGAAGAGCCTGCAGAGCAAGGATGAGCAGCAGCAGCTGGACTTCCGGAGGGAGTTGGAGATGTTTGGGAAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470019.5
ENST00000497957.1
3UTR GCA 90 bp TGGTTCAGCTTCCCAAACATCTCCAACTCCCTCCGGAAGTCCAGCTaGTGCTGCTCATCCTTGCTCTGCAGGCTCTTCACAAGTACCAGG +
Preference number: 1 (lower is better)
Translates to: WFSFPNISNSLRKSS*CCSSLLCRLFTSTR
Trigger: CCTGGTACTTGTGAAGAGCCTGCAGAGCAAGGATGAGCAGCAGCAGCTGGACTTCCGGAGGGAGTTGGAGATGTTTGGGAAGCTGAACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470019.5
ENST00000497957.1
3UTR CCA 90 bp AAACTCACTCTTCCCCAGCGTGGTGATGGGCTGCAGGCTAGACCGTaGGAAGTGCATCTTATCACTTGTGCTGTGGCGTTTGTTGGTGGC +
Preference number: 1 (lower is better)
Translates to: KLTLPQRGDGLQARP*EVHLITCAVAFVGG
Trigger: GCCACCAACAAACGCCACAGCACAAGTGATAAGATGCACTTCCCACGGTCTAGCCTGCAGCCCATCACCACGCTGGGGAAGAGTGAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
3UTR CCA 90 bp CCAGCCTGCAAATCTGCCAGTACTTCATCATCTGCCTGCCCACCATaGGGCATCTCTCCATGTGTAAACACTTCCCACATCAGCACACCG +
Preference number: 1 (lower is better)
Translates to: PACKSASTSSSACPP*GISPCVNTSHISTP
Trigger: CGGTGTGCTGATGTGGGAAGTGTTTACACATGGAGAGATGCCCCATGGTGGGCAGGCAGATGATGAAGTACTGGCAGATTTGCAGGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
3UTR GCA 90 bp ACCCCCAAGTGGGACCAGTGGGCCAAGAGACTCATTAACCCTGTGTaGCCAGAACTTGAGAATATTAAGGAACTCCCCACAAACCCAGCT +
Preference number: 1 (lower is better)
Translates to: TPKWDQWAKRLINPV*PELENIKELPTNPA
Trigger: AGCTGGGTTTGTGGGGAGTTCCTTAATATTCTCAAGTTCTGGGCACACAGGGTTAATGAGTCTCTTGGCCCACTGGTCCCACTTGGGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
3UTR-3UTR TCA 90 bp TGTGCTGTGGCGTTTGTTGGTGGCCGCGGGGCCGGAGCCCAAGCTGGTCAAGGCGGCCCAGCACGGCAATaGTGTAGGCCACAGCGGCAC +
Preference number: 2 (lower is better)
Translates to: CAVAFVGGRGAGAQAGQGGPARQ*CRPQRH
Trigger: GTGCCGCTGTGGCCTACATCATTGCCGTGCTGGGCC...GCCTTGACCAGCTTGGGCTCCGGCCCCGCGGCCACCAACAAACGCCACAGCACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
3UTR-3UTR TCA 90 bp CCCTGCCCAGGCCATCCTGAGCGGGCTCCCTCCTCACGGCTTGCTGTCCACGGTCTTGTCTCTGGGCACTaGCCAGGCAGTTACGCGCAG +
Preference number: 2 (lower is better)
Translates to: PCPGHPERAPSSRLAVHGLVSGH*PGSYAQ
Trigger: CTGCGCGTAACTGCCTGGTCAGTGCCCAGAGACAAG...ACCGTGGACAGCAAGCCGTGAGGAGGGAGCCCGCTCAGGATGGCCTGGGCAGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
3UTR-3UTR TCA 90 bp GCGTTTGTTGGTGGCCGCGGGGCCGGAGCCCAAGCTGGTCAAGGCCACTTCTTCGGCCCAGCACGGCAATaGTGTAGGCCACAGCGGCAC +
Preference number: 2 (lower is better)
Translates to: AFVGGRGAGAQAGQGHFFGPARQ*CRPQRH
Trigger: GTGCCGCTGTGGCCTACATCATTGCCGTGCTGGGCC...GAAGAAGTGGCCTTGACCAGCTTGGGCTCCGGCCCCGCGGCCACCAACAAACGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
3UTR-3UTR GCA 90 bp CTTGTGCTGTGGCGTTTGTTGGTGGCCGCGGGGCCGGAGCCCAAGCTGGTCAAGTCCTCGCCCTCGGGCTaGTTCTGCAGCCGCTTGGCT +
Preference number: 2 (lower is better)
Translates to: LVLWRLLVAAGPEPKLVKSSPSG*FCSRLA
Trigger: AGCCAAGCGGCTGCAGAAGCAGCCCGAGGGCGAGGA...CTTGACCAGCTTGGGCTCCGGCCCCGCGGCCACCAACAAACGCCACAGCACAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
3UTR-3UTR GCA 90 bp TGTGCTGTGGCGTTTGTTGGTGGCCGCGGGGCCGGAGCCCAAGCTGGTCAAGGCGAGGGCTGCCCGTTCTaGAAAGGCCCACCGTTGAGG +
Preference number: 2 (lower is better)
Translates to: CAVAFVGGRGAGAQAGQGEGCPF*KGPPLR
Trigger: CCTCAACGGTGGGCCTTTGCAGAACGGGCAGCCCTC...GCCTTGACCAGCTTGGGCTCCGGCCCCGCGGCCACCAACAAACGCCACAGCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
3UTR-3UTR GCA 90 bp TGGGGTCCAGGATGCGGTCCTTGCCTTTCCACTGAATCAGCGGCTTGGGGTCCCGGGCTTGCGCCTCGATaGTGCCGGCTGGGGTGCTGC +
Preference number: 2 (lower is better)
Translates to: WGPGCGPCLSTESAAWGPGLAPR*CRLGCC
Trigger: GCAGCACCCCAGCCGGCAGCATCGAGGCGCAAGCCC...GGGACCCCAAGCCGCTGATTCAGTGGAAAGGCAAGGACCGCATCCTGGACCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000470019.5
3UTR-3UTR CCA 90 bp ACCCTCCAGGATGGCCTCGGGGGACATCCAGCGCAGCGGCACCCAGGCCTGGCGGCACAAAGCGGTTGTTaGACAGGTGCTCCATGCCCA +
Preference number: 2 (lower is better)
Translates to: TLQDGLGGHPAQRHPGLAAQSGC*TGAPCP
Trigger: TGGGCATGGAGCACCTGTCCAACAACCGCTTTGTGC...CGCCAGGCCTGGGTGCCGCTGCGCTGGATGTCCCCCGAGGCCATCCTGGAGGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
3UTR-3UTR TCA 90 bp CCGTTCTGCAAAGGCCCACCGTTGAGGCATTCCATCTCTGGCTCCTCGCCCTCGGGCCCAGCACGGCAATaGTGTAGGCCACAGCGGCAC +
Preference number: 2 (lower is better)
Translates to: PFCKGPPLRHSISGSSPSGPARQ*CRPQRH
Trigger: GTGCCGCTGTGGCCTACATCATTGCCGTGCTGGGCC...CGAGGGCGAGGAGCCAGAGATGGAATGCCTCAACGGTGGGCCTTTGCAGAACGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
3UTR-3UTR CCA 90 bp ACGGTGCTGTCTCCCAGGGCGCTGGCAATCTCACTGAAGGAGGGCCGGTCCTTGAGGCTCGGGGGTGGCTaGGCTGAGAACTGGCAATGG +
Preference number: 2 (lower is better)
Translates to: TVLSPRALAISLKEGRSLRLGGG*AENWQW
Trigger: CCATTGCCAGTTCTCAGCCCAGCCACCCCCGAGCCT...CAAGGACCGGCCCTCCTTCAGTGAGATTGCCAGCGCCCTGGGAGACAGCACCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470019.5
3UTR CAA 90 bp CCAGCGTCATCTCGAGTCACCCGGGCAAAATGCAGGGTCCCAGCGTaGTCTGTCACCCACTCTGGGAGGCTGCTCCCATCTGCCCGTTCC +
Preference number: 2 (lower is better)
Translates to: PASSRVTRAKCRVPA*SVTHSGRLLPSARS
Trigger: GGAACGGGCAGATGGGAGCAGCCTCCCAGAGTGGGTGACAGACAACGCTGGGACCCTGCATTTTGCCCGGGTGACTCGAGATGACGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470019.5
3UTR-3UTR TCA 90 bp ACGGTGCTGTCTCCCAGGGCGCTGGCAATCTCACTGAAGGAGGGCCGGTCCTTGCTTGTCTCTGGGCACTaGCCAGGCAGTTACGCGCAG +
Preference number: 2 (lower is better)
Translates to: TVLSPRALAISLKEGRSLLVSGH*PGSYAQ
Trigger: CTGCGCGTAACTGCCTGGTCAGTGCCCAGAGACAAG...CAAGGACCGGCCCTCCTTCAGTGAGATTGCCAGCGCCCTGGGAGACAGCACCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
3UTR-3UTR TCA 90 bp TTGTGCTGTGGCGTTTGTTGGTGGCCGCGGGGCCGGAGCCCAAGCTGGTCAAGGGCAAAGGCCCACCGTTaGGGCATTCCATCTCTGGCT +
Preference number: 2 (lower is better)
Translates to: LCCGVCWWPRGRSPSWSRAKAHR*GIPSLA
Trigger: AGCCAGAGATGGAATGCCTCAACGGTGGGCCTTTGC...CCTTGACCAGCTTGGGCTCCGGCCCCGCGGCCACCAACAAACGCCACAGCACAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
3UTR-3UTR TCA 90 bp TGTGCTGTGGCGTTTGTTGGTGGCCGCGGGGCCGGAGCCCAAGCTGGTCAAGGCTTCTTGGATCTCTGCTaGGGGCTGCCCGTTCTGCAA +
Preference number: 2 (lower is better)
Translates to: CAVAFVGGRGAGAQAGQGFLDLC*GLPVLQ
Trigger: TTGCAGAACGGGCAGCCCTCAGCAGAGATCCAAGAA...GCCTTGACCAGCTTGGGCTCCGGCCCCGCGGCCACCAACAAACGCCACAGCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
3UTR-3UTR GCA 90 bp TCTTATCACTTGTGCTGTGGCGTTTGTTGGTGGCCGCGGGGCCGGAGCCCAAGCGAGGGCTGCCCGTTCTaGAAAGGCCCACCGTTGAGG +
Preference number: 2 (lower is better)
Translates to: SYHLCCGVCWWPRGRSPSEGCPF*KGPPLR
Trigger: CCTCAACGGTGGGCCTTTGCAGAACGGGCAGCCCTC...GCTTGGGCTCCGGCCCCGCGGCCACCAACAAACGCCACAGCACAAGTGATAAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
3UTR-3UTR GCA 90 bp GTGGGGAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTTCCTCAAAGAGCCACTaGAGGCTCGGGGGTGGCTGG +
Preference number: 2 (lower is better)
Translates to: VGKTWVWVSVHKPRVGRTSSKSH*RLGGGW
Trigger: CCAGCCACCCCCGAGCCTGCAGTGGCTCTTTGAGGA...AGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTCCCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000470019.5
3UTR-3UTR GCA 90 bp CCTGGGCCTCGCACTGCAGTAGGGCTGTGTGGCCCTGGTACACAGTCGTACGCTTGCTGCCGGCTGGGGTaGTGCTCATACAACGGTACC +
Preference number: 2 (lower is better)
Translates to: PGPRTAVGLCGPGTQSYACCRLG*CSYNGT
Trigger: GGTACCGTTGTATGAGCAGCACCCCAGCCGGCAGCA...AGCGTACGACTGTGTACCAGGGCCACACAGCCCTACTGCAGTGCGAGGCCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470019.5
3UTR-3UTR CCA 90 bp CCTGGGCCTCGCACTGCAGTAGGGCTGTGTGGCCCTGGTACACAGTCGTACGCTCGTTGGCAAACACTGTaGCTCTGCGGAGGTGTGGGG +
Preference number: 2 (lower is better)
Translates to: PGPRTAVGLCGPGTQSYARWQTL*LCGGVG
Trigger: CCCCACACCTCCGCAGAGCCACAGTGTTTGCCAACG...AGCGTACGACTGTGTACCAGGGCCACACAGCCCTACTGCAGTGCGAGGCCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470019.5
3UTR-3UTR CCA 90 bp GCCAGGAACACCTCCCCAAACTCACTCTTCCCCAGCGTGGTGATGGGCTGCAGGGATCCCTGCATTGCGTaGCCGGACCTGGGTCAGCAG +
Preference number: 2 (lower is better)
Translates to: ARNTSPNSLFPSVVMGCRDPCIA*PDLGQQ
Trigger: CTGCTGACCCAGGTCCGGCCACGCAATGCAGGGATC...CCTGCAGCCCATCACCACGCTGGGGAAGAGTGAGTTTGGGGAGGTGTTCCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470019.5
3UTR-3UTR TCA 90 bp GCCCAGACATCAGACTTGGTAGAGAAGTCACCCTCCAGGATGGCCTCGGGGGACCGCTGGCAATCTCACTaGAGGAGGGCCGGTCCTTGG +
Preference number: 2 (lower is better)
Translates to: AQTSDLVEKSPSRMASGDRWQSH*RRAGPW
Trigger: CCAAGGACCGGCCCTCCTTCAGTGAGATTGCCAGCG...GTCCCCCGAGGCCATCCTGGAGGGTGACTTCTCTACCAAGTCTGATGTCTGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
3UTR-3UTR TCA 90 bp CAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCCTGCCCAGGCCATCCTaGGCGGGCTCCCTCCTCACG +
Preference number: 2 (lower is better)
Translates to: QEDRDLAHHAVSFPLEMSLPRPS*AGSLLT
Trigger: CGTGAGGAGGGAGCCCGCTCAGGATGGCCTGGGCAG...GGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
3UTR-3UTR TCA 90 bp ATCACTTGTGCTGTGGCGTTTGTTGGTGGCCGCGGGGCCGGAGCCCAAGCTGGTGCAAAGGCCCACCGTTaGGGCATTCCATCTCTGGCT +
Preference number: 2 (lower is better)
Translates to: ITCAVAFVGGRGAGAQAGAKAHR*GIPSLA
Trigger: AGCCAGAGATGGAATGCCTCAACGGTGGGCCTTTGC...ACCAGCTTGGGCTCCGGCCCCGCGGCCACCAACAAACGCCACAGCACAAGTGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
3UTR-3UTR TCA 90 bp GTTGCCCGGGCTGAAGAGCAACGGTGCGATCTCAGCTCATTGCAACCTCTGCCTCAACTCCTGACCTTGTaGTCCGCCCGGCTCGGCCTC +
Preference number: 2 (lower is better)
Translates to: VARAEEQRCDLSSLQPLPQLLTL*SARLGL
Trigger: GAGGCCGAGCCGGGCGGATCACAAGGTCAGGAGTTG...AGGCAGAGGTTGCAATGAGCTGAGATCGCACCGTTGCTCTTCAGCCCGGGCAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471863.5
3UTR-3UTR GCA 90 bp ACCTCCCCAAACTCACTCTTCCCCAGCGTGGTGATGGGCTGCAGGCTAGACCGTCCCTCGGGCTGCTTCTaGAGCCGCTTGGCTTTGCAG +
Preference number: 2 (lower is better)
Translates to: TSPNSLFPSVVMGCRLDRPSGCF*SRLALQ
Trigger: CTGCAAAGCCAAGCGGCTGCAGAAGCAGCCCGAGGG...ACGGTCTAGCCTGCAGCCCATCACCACGCTGGGGAAGAGTGAGTTTGGGGAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
3UTR-3UTR CCA 90 bp GTTTGTTGGTGGCCGCGGGGCCGGAGCCCAAGCTGGTCAAGGCCACTTCTTCTTATGCCCAGGGCTACCTaGGTGCATAGGGCCACCTTC +
Preference number: 2 (lower is better)
Translates to: VCWWPRGRSPSWSRPLLLMPRAT*VHRATF
Trigger: GAAGGTGGCCCTATGCACCCAGGTAGCCCTGGGCAT...AAGAAGAAGTGGCCTTGACCAGCTTGGGCTCCGGCCCCGCGGCCACCAACAAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470019.5
3UTR-3UTR CCA 90 bp CTTGTGCTGTGGCGTTTGTTGGTGGCCGCGGGGCCGGAGCCCAAGCTGGTCAAGACACACAGATGGGTCTaGGCAGGGGCGTTGGATGTT +
Preference number: 2 (lower is better)
Translates to: LVLWRLLVAAGPEPKLVKTHRWV*AGALDV
Trigger: AACATCCAACGCCCCTGCCCAGACCCATCTGTGTGT...CTTGACCAGCTTGGGCTCCGGCCCCGCGGCCACCAACAAACGCCACAGCACAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494146.5
3UTR CAA 90 bp AGGCTAGACCGTGGGAAGTGCATCTTATCACTTGTGCTGTGGCGTTaGTTGGTGGCCGCGGGGCCGGAGCCCAAGCTGGTCAAGGCCACT +
Preference number: 2 (lower is better)
Translates to: RLDRGKCILSLVLWR*LVAAGPEPKLVKAT
Trigger: AGTGGCCTTGACCAGCTTGGGCTCCGGCCCCGCGGCCACCAACAAACGCCACAGCACAAGTGATAAGATGCACTTCCCACGGTCTAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
3UTR-3UTR TCA 90 bp CTTATGCACAAAGCGGTTGTTGGACAGGTGCTCCATGCCCAGGGCTACCTGGGTGGGCAGCCCTCGGGCTaGGGAAGTCTAGCCTTCCCA +
Preference number: 2 (lower is better)
Translates to: LMHKAVVGQVLHAQGYLGGQPSG*GSLAFP
Trigger: TGGGAAGGCTAGACTTCCTCAGCCCGAGGGCTGCCC...ACCCAGGTAGCCCTGGGCATGGAGCACCTGTCCAACAACCGCTTTGTGCATAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
3UTR-3UTR TCA 90 bp GTTGGTGGCCGCGGGGCCGGAGCCCAAGCTGGTCAAGGCCACTTCTTCTTGGATTTCTTGGATCTCTGCTaGGGGCTGCCCGTTCTGCAA +
Preference number: 2 (lower is better)
Translates to: VGGRGAGAQAGQGHFFLDFLDLC*GLPVLQ
Trigger: TTGCAGAACGGGCAGCCCTCAGCAGAGATCCAAGAA...ATCCAAGAAGAAGTGGCCTTGACCAGCTTGGGCTCCGGCCCCGCGGCCACCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
3UTR-3UTR GCA 90 bp GCAGTAGAACATGAGGCCCAGCACGGCAATGATGTAGGCCACAGCGGCACCCACCGGTTGTTGGACAGGTaGTCCATGCCCAGGGCTACC +
Preference number: 2 (lower is better)
Translates to: AVEHEAQHGNDVGHSGTHRLLDR*SMPRAT
Trigger: GGTAGCCCTGGGCATGGAGCACCTGTCCAACAACCG...GTGGGTGCCGCTGTGGCCTACATCATTGCCGTGCTGGGCCTCATGTTCTACTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470019.5
3UTR-3UTR GCA 90 bp CTTGTGCTGTGGCGTTTGTTGGTGGCCGCGGGGCCGGAGCCCAAGCTGGTCAAGCAGTACTTCATCATCTaGCTGCCCACCATGGGGCAT +
Preference number: 2 (lower is better)
Translates to: LVLWRLLVAAGPEPKLVKQYFII*LPTMGH
Trigger: ATGCCCCATGGTGGGCAGGCAGATGATGAAGTACTG...CTTGACCAGCTTGGGCTCCGGCCCCGCGGCCACCAACAAACGCCACAGCACAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470019.5
3UTR-3UTR GCA 90 bp GCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTCAGCCTCCCAAAGGGGAAAGGCCAGGCCCTaGTCAGACCTCAGCAATGCC +
Preference number: 2 (lower is better)
Translates to: AQLKALVAQFGSKSASQRGKARP*SDLSNA
Trigger: GGCATTGCTGAGGTCTGAGCAGGGCCTGGCCTTTCC...CCTTTGGGAGGCTGACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
3UTR-3UTR GCA 90 bp ATCACTTGTGCTGTGGCGTTTGTTGGTGGCCGCGGGGCCGGAGCCCAAGCTGGTGCAGCCGCTTGGCTTTaGAGCGCTTCTTGCAGTAGA +
Preference number: 2 (lower is better)
Translates to: ITCAVAFVGGRGAGAQAGAAAWL*SASCSR
Trigger: TCTACTGCAAGAAGCGCTGCAAAGCCAAGCGGCTGC...ACCAGCTTGGGCTCCGGCCCCGCGGCCACCAACAAACGCCACAGCACAAGTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
3UTR-3UTR GCA 90 bp ACTTCTTCTTGGATCTCTGCTGAGGGCTGCCCGTTCTGCAAAGGCCCACCGTTGTCCTCGCCCTCGGGCTaGTTCTGCAGCCGCTTGGCT +
Preference number: 2 (lower is better)
Translates to: TSSWISAEGCPFCKGPPLSSPSG*FCSRLA
Trigger: AGCCAAGCGGCTGCAGAAGCAGCCCGAGGGCGAGGA...CAACGGTGGGCCTTTGCAGAACGGGCAGCCCTCAGCAGAGATCCAAGAAGAAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
3UTR-3UTR GCA 90 bp GTCAAGGCCACTTCTTCTTGGATCTCTGCTGAGGGCTGCCCGTTCTGCAAAGGCTCCTCGCCCTCGGGCTaGTTCTGCAGCCGCTTGGCT +
Preference number: 2 (lower is better)
Translates to: VKATSSWISAEGCPFCKGSSPSG*FCSRLA
Trigger: AGCCAAGCGGCTGCAGAAGCAGCCCGAGGGCGAGGA...GCCTTTGCAGAACGGGCAGCCCTCAGCAGAGATCCAAGAAGAAGTGGCCTTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
3UTR-3UTR GCA 90 bp AAGTGCATCTTATCACTTGTGCTGTGGCGTTTGTTGGTGGCCGCGGGGCCGGAGGAGGGCTGCCCGTTCTaGAAAGGCCCACCGTTGAGG +
Preference number: 2 (lower is better)
Translates to: KCILSLVLWRLLVAAGPEEGCPF*KGPPLR
Trigger: CCTCAACGGTGGGCCTTTGCAGAACGGGCAGCCCTC...CTCCGGCCCCGCGGCCACCAACAAACGCCACAGCACAAGTGATAAGATGCACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
3UTR-3UTR GCA 90 bp TCCCCAAACTCACTCTTCCCCAGCGTGGTGATGGGCTGCAGGCTAGACCGTGGGATCTCTGCTGAGGGCTaGCCGTTCTGCAAAGGCCCA +
Preference number: 2 (lower is better)
Translates to: SPNSLFPSVVMGCRLDRGISAEG*PFCKGP
Trigger: TGGGCCTTTGCAGAACGGGCAGCCCTCAGCAGAGAT...CCCACGGTCTAGCCTGCAGCCCATCACCACGCTGGGGAAGAGTGAGTTTGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
3UTR-3UTR GCA 90 bp CGGAGCCCAAGCTGGTCAAGGCCACTTCTTCTTGGATCTCTGCTGAGGGCTGCCGGTAGATCCCTGCATTaGGTGGCCGGACCTGGGTCA +
Preference number: 2 (lower is better)
Translates to: RSPSWSRPLLLGSLLRAAGRSLH*VAGPGS
Trigger: TGACCCAGGTCCGGCCACGCAATGCAGGGATCTACC...GGCAGCCCTCAGCAGAGATCCAAGAAGAAGTGGCCTTGACCAGCTTGGGCTCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470019.5
3UTR-3UTR GCA 90 bp CTTGTGCTGTGGCGTTTGTTGGTGGCCGCGGGGCCGGAGCCCAAGCTGGTCAAGGAGGCTGCTCCCATCTaGCCGTTCCCACTTAATAGT +
Preference number: 2 (lower is better)
Translates to: LVLWRLLVAAGPEPKLVKEAAPI*PFPLNS
Trigger: ACTATTAAGTGGGAACGGGCAGATGGGAGCAGCCTC...CTTGACCAGCTTGGGCTCCGGCCCCGCGGCCACCAACAAACGCCACAGCACAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470019.5
3UTR-3UTR CCA 90 bp GGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTCCTCTATATGTGGCGTTTGTTGGTaGCCGCGGGGCCGGAGCCCA +
Preference number: 2 (lower is better)
Translates to: GQCAQAQSGEDSLAVSSICGVCW*PRGRSP
Trigger: TGGGCTCCGGCCCCGCGGCCACCAACAAACGCCACA...TATAGAGGACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470019.5
3UTR-3UTR CCA 90 bp ACCGAAGGCCCAGACATCAGACTTGGTAGAGAAGTCACCCTCCAGGATGGCCTCGGCTCTGCGGAGGTGTaGGGGGCGACTGCGGTTAGT +
Preference number: 2 (lower is better)
Translates to: TEGPDIRLGREVTLQDGLGSAEV*GATAVS
Trigger: ACTAACCGCAGTCGCCCCCCACACCTCCGCAGAGCC...GAGGCCATCCTGGAGGGTGACTTCTCTACCAAGTCTGATGTCTGGGCCTTCGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470019.5
3UTR CAA 90 bp CTAGACCGTGGGAAGTGCATCTTATCACTTGTGCTGTGGCGTTTGTaGGTGGCCGCGGGGCCGGAGCCCAAGCTGGTCAAGGCCACTTCT +
Preference number: 2 (lower is better)
Translates to: LDRGKCILSLVLWRL*VAAGPEPKLVKATS
Trigger: AGAAGTGGCCTTGACCAGCTTGGGCTCCGGCCCCGCGGCCACCAACAAACGCCACAGCACAAGTGATAAGATGCACTTCCCACGGTCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
3UTR CAA 90 bp CAGGCAATCCAAGTAGCCGGGTTTGCCCTCCTCCAGCTGGCTGTCTaGGGGCTTCTTCAGCCAGGAGGGCACAGTGGCCACAGTGATGTT +
Preference number: 2 (lower is better)
Translates to: QAIQVAGFALLQLAV*GLLQPGGHSGHSDV
Trigger: AACATCACTGTGGCCACTGTGCCCTCCTGGCTGAAGAAGCCCCAAGACAGCCAGCTGGAGGAGGGCAAACCCGGCTACTTGGATTGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470019.5
3UTR-3UTR TCA 90 bp CTTATCACTTGTGCTGTGGCGTTTGTTGGTGGCCGCGGGGCCGGAGCCCAAGCTTTCTTGGATCTCTGCTaGGGGCTGCCCGTTCTGCAA +
Preference number: 2 (lower is better)
Translates to: LITCAVAFVGGRGAGAQAFLDLC*GLPVLQ
Trigger: TTGCAGAACGGGCAGCCCTCAGCAGAGATCCAAGAA...AGCTTGGGCTCCGGCCCCGCGGCCACCAACAAACGCCACAGCACAAGTGATAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
3UTR-3UTR TCA 90 bp GCAGTAGAACATGAGGCCCAGCACGGCAATGATGTAGGCCACAGCGGCACCCACCGGCACAGGCTTGTCTaGGAGACACACAGATGGGTC +
Preference number: 2 (lower is better)
Translates to: AVEHEAQHGNDVGHSGTHRHRLV*ETHRWV
Trigger: GACCCATCTGTGTGTCTCTCAGACAAGCCTGTGCCG...GTGGGTGCCGCTGTGGCCTACATCATTGCCGTGCTGGGCCTCATGTTCTACTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494146.5
3UTR-3UTR TCA 90 bp CAATGCAAGTGTAGTTGCCAGCGTCATCTCGAGTCACCCGGGCAAAATGCAGGGACATCCTGTCTCCGCTaGCCAGCCAGGTTGGCCGCG +
Preference number: 2 (lower is better)
Translates to: QCKCSCQRHLESPGQNAGTSCLR*PARLAA
Trigger: CGCGGCCAACCTGGCTGGTCAGCGGAGACAGGATGT...CCCTGCATTTTGCCCGGGTGACTCGAGATGACGCTGGCAACTACACTTGCATTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470019.5
3UTR-3UTR GCA 90 bp ACCGAAGGCCCAGACATCAGACTTGGTAGAGAAGTCACCCTCCAGGATGGCCTCTGGACAGGTGCTCCATaGCCAGGGCTACCTGGGTGC +
Preference number: 2 (lower is better)
Translates to: TEGPDIRLGREVTLQDGLWTGAP*PGLPGC
Trigger: GCACCCAGGTAGCCCTGGGCATGGAGCACCTGTCCA...GAGGCCATCCTGGAGGGTGACTTCTCTACCAAGTCTGATGTCTGGGCCTTCGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
3UTR-3UTR GCA 90 bp TGCTCAGACCTCAGCAATGCCTGTTGCACTAGGGCAGGGGCCTCAGGGCCCAGGACTTCATCATCTGCCTaGCCACCATGGGGCATCTCT +
Preference number: 2 (lower is better)
Translates to: CSDLSNACCTRAGASGPRTSSSA*PPWGIS
Trigger: AGAGATGCCCCATGGTGGGCAGGCAGATGATGAAGT...CCTGGGCCCTGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAGGTCTGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
3UTR-3UTR GCA 90 bp GCCCAGACATCAGACTTGGTAGAGAAGTCACCCTCCAGGATGGCCTCGGGGGACCTCAGCAATGCCTGTTaGACTAGGGCAGGGGCCTCA +
Preference number: 2 (lower is better)
Translates to: AQTSDLVEKSPSRMASGDLSNAC*TRAGAS
Trigger: TGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAG...GTCCCCCGAGGCCATCCTGGAGGGTGACTTCTCTACCAAGTCTGATGTCTGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
3UTR-3UTR GCA 90 bp GTGGTTCAGCTTCCCAAACATCTCCAACTCCCTCCGGAAGTCCAGCTGCTGCTGGAGGGCTGCCCGTTCTaGAAAGGCCCACCGTTGAGG +
Preference number: 2 (lower is better)
Translates to: VVQLPKHLQLPPEVQLLLEGCPF*KGPPLR
Trigger: CCTCAACGGTGGGCCTTTGCAGAACGGGCAGCCCTC...CAGCAGCAGCTGGACTTCCGGAGGGAGTTGGAGATGTTTGGGAAGCTGAACCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470019.5
ENST00000497957.1
3UTR-3UTR GCA 90 bp CAGCCGATAGAGTTTGGAAGGGCAGCCCTCGGGCTGAGGAAGTCTAGCCTTCCCATCTCTGCTGAGGGCTaGCCGTTCTGCAAAGGCCCA +
Preference number: 2 (lower is better)
Translates to: QPIEFGRAALGLRKSSLPISAEG*PFCKGP
Trigger: TGGGCCTTTGCAGAACGGGCAGCCCTCAGCAGAGAT...GGGAAGGCTAGACTTCCTCAGCCCGAGGGCTGCCCTTCCAAACTCTATCGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470019.5
3UTR-3UTR GCA 90 bp TGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTAGCGTGGTGATGGGCTaGAGGCTAGACCGTGGGAAG +
Preference number: 2 (lower is better)
Translates to: WVWVSVHKPRVGRTHLLCSVVMG*RLDRGK
Trigger: CTTCCCACGGTCTAGCCTGCAGCCCATCACCACGCT...ACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470019.5
3UTR-3UTR GCA 90 bp CATGGATCACCAGGGAGCCATTCTGGAAGATGTGCATCCTGGGTCCCAGCTTGGACTTGGACACGGGCTTaGGCCTCGATGCTGCCGGCT +
Preference number: 2 (lower is better)
Translates to: HGSPGSHSGRCASWVPAWTWTRA*ASMLPA
Trigger: AGCCGGCAGCATCGAGGCGCAAGCCCGTGTCCAAGT...CCAAGCTGGGACCCAGGATGCACATCTTCCAGAATGGCTCCCTGGTGATCCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470019.5
3UTR-3UTR CCA 90 bp TGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTATGCCCAGGGCTACCTaGGTGCATAGGGCCACCTTC +
Preference number: 2 (lower is better)
Translates to: WVWVSVHKPRVGRTHLLCMPRAT*VHRATF
Trigger: GAAGGTGGCCCTATGCACCCAGGTAGCCCTGGGCAT...ACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
3UTR-3UTR CCA 90 bp GGCAGGGAAAACTGCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTCAGGGTGGGGAAGACGTaGGTCTGGGTCAGTGTGCAC +
Preference number: 2 (lower is better)
Translates to: GRENCPAQSPSRPVWVQVRVGKT*VWVSVH
Trigger: GTGCACACTGACCCAGACCCACGTCTTCCCCACCCT...GACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
3UTR-3UTR CCA 90 bp CTAGACCGTGGGAAGTGCATCTTATCACTTGTGCTGTGGCGTTTGTTGGTGGCCTGCTGTGGCGTTTGTTaGTGGCCGCGGGGCCGGAGC +
Preference number: 2 (lower is better)
Translates to: LDRGKCILSLVLWRLLVACCGVC*WPRGRS
Trigger: GCTCCGGCCCCGCGGCCACCAACAAACGCCACAGCA...GGCCACCAACAAACGCCACAGCACAAGTGATAAGATGCACTTCCCACGGTCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
3UTR-3UTR CCA 90 bp AGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCCGCTACTACCACGTCCTaGGGTGCCAGCACCACCCTG +
Preference number: 2 (lower is better)
Translates to: RDLAHHAVSFPLEMSSPAATTTS*GASTTL
Trigger: CAGGGTGGTGCTGGCACCCCAGGACGTGGTAGTAGC...GGCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470019.5
3UTR-3UTR CCA 90 bp GAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCGCTCCCACCACACGCTaGGCTCTGGCAGACCCTTGG +
Preference number: 2 (lower is better)
Translates to: EDRDLAHHAVSFPLEMSSAPTTR*ALADPW
Trigger: CCAAGGGTCTGCCAGAGCCCAGCGTGTGGTGGGAGC...GGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470019.5
3UTR-3UTR CCA 90 bp CACTTGGACACGGGCTTGCGCCTCGATGCTGCCGGCTGGGGTGCTGCTCATACAGACAACTGTAGGTTTTaGTGTGGCCTGGGTCAGGCA +
Preference number: 2 (lower is better)
Translates to: HLDTGLRLDAAGWGAAHTDNCRF*CGLGQA
Trigger: TGCCTGACCCAGGCCACACCAAAACCTACAGTTGTC...TGTATGAGCAGCACCCCAGCCGGCAGCATCGAGGCGCAAGCCCGTGTCCAAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470019.5
3UTR-3UTR CCA 90 bp TGGCTGAACAGGGCACCGTGGCCTCCTTGTCAAACTCCATGCACTGCTGTGGCTCTCGATGCTGCCGGCTaGGGTGCTGCTCATACAACG +
Preference number: 2 (lower is better)
Translates to: WLNRAPWPPCQTPCTAVALDAAG*GAAHTT
Trigger: CGTTGTATGAGCAGCACCCCAGCCGGCAGCATCGAG...AGCCACAGCAGTGCATGGAGTTTGACAAGGAGGCCACGGTGCCCTGTTCAGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470019.5
3UTR CAA 90 bp CTGACCAGGCAGTTACGCGCAGCCAAGTCCTTATGCACAAAGCGGTaGTTGGACAGGTGCTCCATGCCCAGGGCTACCTGGGTGCATAGG +
Preference number: 2 (lower is better)
Translates to: LTRQLRAAKSLCTKR*LDRCSMPRATWVHR
Trigger: CCTATGCACCCAGGTAGCCCTGGGCATGGAGCACCTGTCCAACAACCGCTTTGTGCATAAGGACTTGGCTGCGCGTAACTGCCTGGTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
3UTR-3UTR TCA 90 bp GAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCGCTGGCAATCTCACTaGAGGAGGGCCGGTCCTTGG +
Preference number: 2 (lower is better)
Translates to: EDRDLAHHAVSFPLEMSSRWQSH*RRAGPW
Trigger: CCAAGGACCGGCCCTCCTTCAGTGAGATTGCCAGCG...GGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
3UTR-3UTR TCA 90 bp ACAAAGCGGTTGTTGGACAGGTGCTCCATGCCCAGGGCTACCTGGGTGCATAGGTCCTTGCCTTTCCACTaGATCAGCGGCTTGGGGTCC +
Preference number: 2 (lower is better)
Translates to: TKRLLDRCSMPRATWVHRSLPFH*ISGLGS
Trigger: GGACCCCAAGCCGCTGATTCAGTGGAAAGGCAAGGA...CCTATGCACCCAGGTAGCCCTGGGCATGGAGCACCTGTCCAACAACCGCTTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470019.5
3UTR-3UTR GCA 90 bp TTCCCAGCCTGCAAATCTGCCAGTACTTCATCATCTGCCTGCCCACCATGGGGCCCAGGGCTACCTGGGTaGATAGGGCCACCTTCTGCT +
Preference number: 2 (lower is better)
Translates to: FPACKSASTSSSACPPWGPGLPG*IGPPSA
Trigger: AGCAGAAGGTGGCCCTATGCACCCAGGTAGCCCTGG...GCCCCATGGTGGGCAGGCAGATGATGAAGTACTGGCAGATTTGCAGGCTGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
3UTR-3UTR GCA 90 bp CACATCAGCACACCGAAGGCCCAGACATCAGACTTGGTAGAGAAGTCACCCTCCTGGACAGGTGCTCCATaGCCAGGGCTACCTGGGTGC +
Preference number: 2 (lower is better)
Translates to: HISTPKAQTSDLVEKSPSWTGAP*PGLPGC
Trigger: GCACCCAGGTAGCCCTGGGCATGGAGCACCTGTCCA...GGAGGGTGACTTCTCTACCAAGTCTGATGTCTGGGCCTTCGGTGTGCTGATGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
3UTR-3UTR GCA 90 bp ACGGTGCTGTCTCCCAGGGCGCTGGCAATCTCACTGAAGGAGGGCCGGTCCTTGCCCAGCCTGCAAATCTaGCAGTACTTCATCATCTGC +
Preference number: 2 (lower is better)
Translates to: TVLSPRALAISLKEGRSLPSLQI*QYFIIC
Trigger: GCAGATGATGAAGTACTGGCAGATTTGCAGGCTGGG...CAAGGACCGGCCCTCCTTCAGTGAGATTGCCAGCGCCCTGGGAGACAGCACCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
3UTR-3UTR GCA 90 bp GCCTGCAAATCTGCCAGTACTTCATCATCTGCCTGCCCACCATGGGGCATCTCTCCTTCTGGTAGACCCTaGCATGGGTGGGCAGCCGGA +
Preference number: 2 (lower is better)
Translates to: ACKSASTSSSACPPWGISPSGRP*HGWAAG
Trigger: TCCGGCTGCCCACCCATGGCAGGGTCTACCAGAAGG...AGAGATGCCCCATGGTGGGCAGGCAGATGATGAAGTACTGGCAGATTTGCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470019.5
3UTR-3UTR CCA 90 bp GCCGCGGGGCCGGAGCCCAAGCTGGTCAAGGCCACTTCTTCTTGGATCTCTGCTCCACCGACAACCCAATaGTCTGGATCATCTTGTAGG +
Preference number: 2 (lower is better)
Translates to: AAGPEPKLVKATSSWISAPPTTQ*SGSSCR
Trigger: CCTACAAGATGATCCAGACCATTGGGTTGTCGGTGG...AGCAGAGATCCAAGAAGAAGTGGCCTTGACCAGCTTGGGCTCCGGCCCCGCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
3UTR-3UTR CCA 90 bp GAAGTGCATCTTATCACTTGTGCTGTGGCGTTTGTTGGTGGCCGCGGGGCCGGAGCTTCTGCAGCCGCTTaGCTTTGCAGCGCTTCTTGC +
Preference number: 2 (lower is better)
Translates to: EVHLITCAVAFVGGRGAGASAAA*LCSASC
Trigger: GCAAGAAGCGCTGCAAAGCCAAGCGGCTGCAGAAGC...TCCGGCCCCGCGGCCACCAACAAACGCCACAGCACAAGTGATAAGATGCACTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
3UTR-3UTR CCA 90 bp GCCTGCCTGGTCCCTGGCAGGTCAAGTCTGACACTTGGCCAAGGGCTCGGCCGCCATGCAGCAGATAAATaGGTCCCAGACTTGAAGGAA +
Preference number: 2 (lower is better)
Translates to: ACLVPGRSSLTLGQGLGRHAADK*VPDLKE
Trigger: TTCCTTCAAGTCTGGGACCCATTTATCTGCTGCATG...GCGGCCGAGCCCTTGGCCAAGTGTCAGACTTGACCTGCCAGGGACCAGGCAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476760.1
3UTR-3UTR CCA 90 bp GGCAGGGAAAACTGCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTCAGCTTTTCCAGCACTTaGACACGGGCTTGCGCCTCG +
Preference number: 2 (lower is better)
Translates to: GRENCPAQSPSRPVWVQVSFSST*TRACAS
Trigger: CGAGGCGCAAGCCCGTGTCCAAGTGCTGGAAAAGCT...GACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470019.5
3UTR-3UTR TCA 90 bp GCCCAGACATCAGACTTGGTAGAGAAGTCACCCTCCAGGATGGCCTCGGGGGACCCTTCTGCTTGGTGCTaGGGGGCTGTGACTTCAATT +
Preference number: 2 (lower is better)
Translates to: AQTSDLVEKSPSRMASGDPSAWC*GAVTSI
Trigger: AATTGAAGTCACAGCCCCTCAGCACCAAGCAGAAGG...GTCCCCCGAGGCCATCCTGGAGGGTGACTTCTCTACCAAGTCTGATGTCTGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
3UTR-3UTR TCA 90 bp GGCAGGGAAAACTGCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTCGCCAGGCACTTAGGATaGGGAAAGGAGAGAAGGGTG +
Preference number: 2 (lower is better)
Translates to: GRENCPAQSPSRPVWVQVARHLG*GKERRV
Trigger: CACCCTTCTCTCCTTTCCTCATCCTAAGTGCCTGGC...GACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
3UTR-3UTR GCA 90 bp TCAAGGCCACTTCTTCTTGGATCTCTGCTGAGGGCTGCCCGTTCTGCAAAGGCCCATAGGGCCACCTTCTaGTTGGTGCTGAGGGGCTGT +
Preference number: 2 (lower is better)
Translates to: SRPLLLGSLLRAARSAKAHRATF*LVLRGC
Trigger: ACAGCCCCTCAGCACCAAGCAGAAGGTGGCCCTATG...GGCCTTTGCAGAACGGGCAGCCCTCAGCAGAGATCCAAGAAGAAGTGGCCTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470019.5
3UTR-3UTR GCA 90 bp GGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTCCTCTATACCAGGGCTACCTGGGTaGATAGGGCCACCTTCTGCT +
Preference number: 2 (lower is better)
Translates to: GQCAQAQSGEDSLAVSSIPGLPG*IGPPSA
Trigger: AGCAGAAGGTGGCCCTATGCACCCAGGTAGCCCTGG...TATAGAGGACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
3UTR-3UTR GCA 90 bp CCAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCGGTTGTTGGACAGGTaGTCCATGCCCAGGGCTACC +
Preference number: 2 (lower is better)
Translates to: PGGQGSCPSCCELPSRDVRLLDR*SMPRAT
Trigger: GGTAGCCCTGGGCATGGAGCACCTGTCCAACAACCG...GACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
3UTR-3UTR GCA 90 bp ACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGGGAGGACAGGGATCTTaGCCATCATGCTGTGAGCTT +
Preference number: 2 (lower is better)
Translates to: TWVWVSVHKPRVGRTHLLGGQGS*PSCCEL
Trigger: AAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCC...CAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
3UTR-3UTR GCA 90 bp ATGCCCACCCACCCCACGCTGCAATTACATATAAAAGCCGCCCGTGGTGCATACGGAAAGGCCAGGCCCTaGTCAGACCTCAGCAATGCC +
Preference number: 2 (lower is better)
Translates to: MPTHPTLQLHIKAARGAYGKARP*SDLSNA
Trigger: GGCATTGCTGAGGTCTGAGCAGGGCCTGGCCTTTCC...GTATGCACCACGGGCGGCTTTTATATGTAATTGCAGCGTGGGGTGGGTGGGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
3UTR-3UTR GCA 90 bp CTGCCGGCTGGGGTGCTGCTCATACAACGGTACCATGTCCCATCATACACCTCCGCAGCCGCTTGGCTTTaGAGCGCTTCTTGCAGTAGA +
Preference number: 2 (lower is better)
Translates to: LPAGVLLIQRYHVPSYTSAAAWL*SASCSR
Trigger: TCTACTGCAAGAAGCGCTGCAAAGCCAAGCGGCTGC...GGAGGTGTATGATGGGACATGGTACCGTTGTATGAGCAGCACCCCAGCCGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470019.5
3UTR-3UTR GCA 90 bp CTAGACCGTGGGAAGTGCATCTTATCACTTGTGCTGTGGCGTTTGTTGGTGGCCCCCTCGGGCTGCTTCTaGAGCCGCTTGGCTTTGCAG +
Preference number: 2 (lower is better)
Translates to: LDRGKCILSLVLWRLLVAPSGCF*SRLALQ
Trigger: CTGCAAAGCCAAGCGGCTGCAGAAGCAGCCCGAGGG...GGCCACCAACAAACGCCACAGCACAAGTGATAAGATGCACTTCCCACGGTCTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
3UTR-3UTR GCA 90 bp CTGCCTGGTCCCTGGCAGGTCAAGTCTGACACTTGGCCAAGGGCTCGGCCGCCCATGATAAATGCATTCTaGCTGGCCCGTTTAACTGGA +
Preference number: 2 (lower is better)
Translates to: LPGPWQVKSDTWPRARPPMINAF*LARLTG
Trigger: TCCAGTTAAACGGGCCAGGCAGAATGCATTTATCAT...GGGCGGCCGAGCCCTTGGCCAAGTGTCAGACTTGACCTGCCAGGGACCAGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476760.1
3UTR-3UTR CCA 90 bp CACATCAGCACACCGAAGGCCCAGACATCAGACTTGGTAGAGAAGTCACCCTCCATGCCCAGGGCTACCTaGGTGCATAGGGCCACCTTC +
Preference number: 2 (lower is better)
Translates to: HISTPKAQTSDLVEKSPSMPRAT*VHRATF
Trigger: GAAGGTGGCCCTATGCACCCAGGTAGCCCTGGGCAT...GGAGGGTGACTTCTCTACCAAGTCTGATGTCTGGGCCTTCGGTGTGCTGATGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
3UTR-3UTR CCA 90 bp GAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCACAAAGCGGTTGTTaGACAGGTGCTCCATGCCCA +
Preference number: 2 (lower is better)
Translates to: EDVGLGQCAQAQSGEDSLAQSGC*TGAPCP
Trigger: TGGGCATGGAGCACCTGTCCAACAACCGCTTTGTGC...AAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
3UTR-3UTR CCA 90 bp GTGGGGAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTACCTTCACTTGTCTCTaGGCACTGACCAGGCAGTTA +
Preference number: 2 (lower is better)
Translates to: VGKTWVWVSVHKPRVGRTTFTCL*ALTRQL
Trigger: TAACTGCCTGGTCAGTGCCCAGAGACAAGTGAAGGT...AGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTCCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
3UTR-3UTR CCA 90 bp CAGATGAGTGGCAGAGTTGGACCCGGTCAAGGGGAGAAGTTGAAGGCCAGAAATAGTCACCCTCCAGGATaGCCTCGGGGGACATCCAGC +
Preference number: 2 (lower is better)
Translates to: QMSGRVGPGQGEKLKARNSHPPG*PRGTSS
Trigger: GCTGGATGTCCCCCGAGGCCATCCTGGAGGGTGACT...ATTTCTGGCCTTCAACTTCTCCCCTTGACCGGGTCCAACTCTGCCACTCATCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
3UTR-3UTR CCA 90 bp GTGGGGAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTTTGAAGGCCAGAAATTaGGGTTACCTGTGGCACCCA +
Preference number: 2 (lower is better)
Translates to: VGKTWVWVSVHKPRVGRTLKARN*GYLWHP
Trigger: TGGGTGCCACAGGTAACCCCAATTTCTGGCCTTCAA...AGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTCCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
3UTR-3UTR CCA 90 bp CGGGGCCGGAGCCCAAGCTGGTCAAGGCCACTTCTTCTTGGATCTCTGCTGAGGCCACCGACAACCCAATaGTCTGGATCATCTTGTAGG +
Preference number: 2 (lower is better)
Translates to: RGRSPSWSRPLLLGSLLRPPTTQ*SGSSCR
Trigger: CCTACAAGATGATCCAGACCATTGGGTTGTCGGTGG...CCTCAGCAGAGATCCAAGAAGAAGTGGCCTTGACCAGCTTGGGCTCCGGCCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
3UTR-3UTR CCA 90 bp GCGGGGCCGGAGCCCAAGCTGGTCAAGGCCACTTCTTCTTGGATCTCTGCTGAGCCACCGACAACCCAATaGTCTGGATCATCTTGTAGG +
Preference number: 2 (lower is better)
Translates to: AGPEPKLVKATSSWISAEPPTTQ*SGSSCR
Trigger: CCTACAAGATGATCCAGACCATTGGGTTGTCGGTGG...CTCAGCAGAGATCCAAGAAGAAGTGGCCTTGACCAGCTTGGGCTCCGGCCCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
3UTR-3UTR CCA 90 bp GTCAAGGCCACTTCTTCTTGGATCTCTGCTGAGGGCTGCCCGTTCTGCAAAGGCGCTTCTGCAGCCGCTTaGCTTTGCAGCGCTTCTTGC +
Preference number: 2 (lower is better)
Translates to: VKATSSWISAEGCPFCKGASAAA*LCSASC
Trigger: GCAAGAAGCGCTGCAAAGCCAAGCGGCTGCAGAAGC...GCCTTTGCAGAACGGGCAGCCCTCAGCAGAGATCCAAGAAGAAGTGGCCTTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
3UTR-3UTR CCA 90 bp GCAGCGCTGCATCAGCCGATAGAGTTTGGAAGGGCAGCCCTCGGGCTGAGGAAGACTGGCAATGGAACATaGCCTCCTCATACCTCGCTA +
Preference number: 2 (lower is better)
Translates to: AALHQPIEFGRAALGLRKTGNGT*PPHTSL
Trigger: TAGCGAGGTATGAGGAGGCCATGTTCCATTGCCAGT...CTTCCTCAGCCCGAGGGCTGCCCTTCCAAACTCTATCGGCTGATGCAGCGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470019.5
3UTR-3UTR CCA 90 bp CAGATGAGTGGCAGAGTTGGACCCGGTCAAGGGGAGAAGTTGAAGGCCAGAAATGCTCTGGCAGACCCTTaGGGGGAAGGCAGGTCACAC +
Preference number: 2 (lower is better)
Translates to: QMSGRVGPGQGEKLKARNALADP*GEGRSH
Trigger: GTGTGACCTGCCTTCCCCCCAAGGGTCTGCCAGAGC...ATTTCTGGCCTTCAACTTCTCCCCTTGACCGGGTCCAACTCTGCCACTCATCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470019.5
3UTR CAA 90 bp AGTTGGCAGATGAGTGGCAGAGTTGGACCCGGTCAAGGGGAGAAGTaGAAGGCCAGAAATTGGGGTTACCTGTGGCACCCACACTGTCCC +
Preference number: 2 (lower is better)
Translates to: SWQMSGRVGPGQGEK*KARNWGYLWHPHCP
Trigger: GGGACAGTGTGGGTGCCACAGGTAACCCCAATTTCTGGCCTTCAACTTCTCCCCTTGACCGGGTCCAACTCTGCCACTCATCTGCCAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
3UTR-3UTR TCA 90 bp GTGTGCCCAGAACTTGAGAATATTAAGGAACTCCCCACAAACCCAGCTCATCCCGTGTGGCTTCCAGGATaGTGGGTGGGCCCCTCTGCC +
Preference number: 2 (lower is better)
Translates to: VCPELENIKELPTNPAHPVWLPG*WVGPSA
Trigger: GGCAGAGGGGCCCACCCATCATCCTGGAAGCCACAC...GGGATGAGCTGGGTTTGTGGGGAGTTCCTTAATATTCTCAAGTTCTGGGCACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470019.5
3UTR-3UTR GCA 90 bp GAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCATAGGGCCACCTTCTaGTTGGTGCTGAGGGGCTGT +
Preference number: 2 (lower is better)
Translates to: EDRDLAHHAVSFPLEMSSHRATF*LVLRGC
Trigger: ACAGCCCCTCAGCACCAAGCAGAAGGTGGCCCTATG...GGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
3UTR-3UTR GCA 90 bp GGAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTGGATCTTGCCCATCATaGTGTGAGCTTCCCTCTAGA +
Preference number: 2 (lower is better)
Translates to: GRRGSGSVCTSPEWGGLTGSCPS*CELPSR
Trigger: TCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCC...AGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
3UTR-3UTR GCA 90 bp GCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTCAGCCTCCCAAAGGGGATCTTGCCCATCATaGTGTGAGCTTCCCTCTAGA +
Preference number: 2 (lower is better)
Translates to: AQLKALVAQFGSKSASQRGSCPS*CELPSR
Trigger: TCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCC...CCTTTGGGAGGCTGACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
3UTR-3UTR GCA 90 bp CAGATGAGTGGCAGAGTTGGACCCGGTCAAGGGGAGAAGTTGAAGGCCAGAAATGGAAAGGCCAGGCCCTaGTCAGACCTCAGCAATGCC +
Preference number: 2 (lower is better)
Translates to: QMSGRVGPGQGEKLKARNGKARP*SDLSNA
Trigger: GGCATTGCTGAGGTCTGAGCAGGGCCTGGCCTTTCC...ATTTCTGGCCTTCAACTTCTCCCCTTGACCGGGTCCAACTCTGCCACTCATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
3UTR-3UTR GCA 90 bp TGGGGTCCAGGATGCGGTCCTTGCCTTTCCACTGAATCAGCGGCTTGGGGTCCCTGGGGAGGACTCACTTaGTGTGTCCTCTATAATCCT +
Preference number: 2 (lower is better)
Translates to: WGPGCGPCLSTESAAWGPWGGLT*CVLYNP
Trigger: AGGATTATAGAGGACACAGCAAGTGAGTCCTCCCCA...GGGACCCCAAGCCGCTGATTCAGTGGAAAGGCAAGGACCGCATCCTGGACCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000470019.5
3UTR-3UTR GCA 90 bp TGCCTGCCCACCATGGGGCATCTCTCCATGTGTAAACACTTCCCACATCAGCACTCTGCCCCTGGCCAATaGAGCGGTAGATCCCTGCAT +
Preference number: 2 (lower is better)
Translates to: CLPTMGHLSMCKHFPHQHSAPGQ*SGRSLH
Trigger: ATGCAGGGATCTACCGCTGCATTGGCCAGGGGCAGA...GTGCTGATGTGGGAAGTGTTTACACATGGAGAGATGCCCCATGGTGGGCAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470019.5
3UTR-3UTR CCA 90 bp ACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGACCTTCACTTGTCTCTaGGCACTGACCAGGCAGTTA +
Preference number: 2 (lower is better)
Translates to: TWVWVSVHKPRVGRTHLLTFTCL*ALTRQL
Trigger: TAACTGCCTGGTCAGTGCCCAGAGACAAGTGAAGGT...CAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
3UTR-3UTR CCA 90 bp GGCAGGGAAAACTGCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTCAAGTTGGCAGATGAGTaGCAGAGTTGGACCCGGTCA +
Preference number: 2 (lower is better)
Translates to: GRENCPAQSPSRPVWVQVKLADE*QSWTRS
Trigger: TGACCGGGTCCAACTCTGCCACTCATCTGCCAACTT...GACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
3UTR-3UTR CCA 90 bp GGGCCGGAGCCCAAGCTGGTCAAGGCCACTTCTTCTTGGATCTCTGCTGAGGGCTCTGGGCAGGGGCGTTaGATGTTAAATAAACGACAG +
Preference number: 2 (lower is better)
Translates to: GPEPKLVKATSSWISAEGSGQGR*MLNKRQ
Trigger: CTGTCGTTTATTTAACATCCAACGCCCCTGCCCAGA...GCCCTCAGCAGAGATCCAAGAAGAAGTGGCCTTGACCAGCTTGGGCTCCGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494146.5
3UTR-3UTR CCA 90 bp CGGAGCCCAAGCTGGTCAAGGCCACTTCTTCTTGGATCTCTGCTGAGGGCTGCCGCTGAGAACTGGCAATaGAACATGGCCTCCTCATAC +
Preference number: 2 (lower is better)
Translates to: RSPSWSRPLLLGSLLRAAAENWQ*NMASSY
Trigger: GTATGAGGAGGCCATGTTCCATTGCCAGTTCTCAGC...GGCAGCCCTCAGCAGAGATCCAAGAAGAAGTGGCCTTGACCAGCTTGGGCTCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470019.5
3UTR-3UTR CCA 90 bp GCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTCAGCCTCCCAAAGGCACTTTCAGCAATATTaGCCAACACCAGCTCGTGGC +
Preference number: 2 (lower is better)
Translates to: AQLKALVAQFGSKSASQRHFQQY*PTPARG
Trigger: GCCACGAGCTGGTGTTGGCCAATATTGCTGAAAGTG...CCTTTGGGAGGCTGACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470019.5
3UTR CAA 90 bp TGGCAGAGTTGGACCCGGTCAAGGGGAGAAGTTGAAGGCCAGAAATaGGGGTTACCTGTGGCACCCACACTGTCCCTGATAGAGGAAGAG +
Preference number: 2 (lower is better)
Translates to: WQSWTRSRGEVEGQK*GLPVAPTLSLIEEE
Trigger: CTCTTCCTCTATCAGGGACAGTGTGGGTGCCACAGGTAACCCCAATTTCTGGCCTTCAACTTCTCCCCTTGACCGGGTCCAACTCTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
3UTR-3UTR TCA 90 bp ACACCGAAGGCCCAGACATCAGACTTGGTAGAGAAGTCACCCTCCAGGATGGCCCCTTCTGCTTGGTGCTaGGGGGCTGTGACTTCAATT +
Preference number: 2 (lower is better)
Translates to: TPKAQTSDLVEKSPSRMAPSAWC*GAVTSI
Trigger: AATTGAAGTCACAGCCCCTCAGCACCAAGCAGAAGG...GGCCATCCTGGAGGGTGACTTCTCTACCAAGTCTGATGTCTGGGCCTTCGGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
3UTR-3UTR GCA 90 bp AGGCCAGAAATTGGGGTTACCTGTGGCACCCACACTGTCCCTGATAGAGGAAGACATAGGGCCACCTTCTaGTTGGTGCTGAGGGGCTGT +
Preference number: 2 (lower is better)
Translates to: RPEIGVTCGTHTVPDRGRHRATF*LVLRGC
Trigger: ACAGCCCCTCAGCACCAAGCAGAAGGTGGCCCTATG...TCTTCCTCTATCAGGGACAGTGTGGGTGCCACAGGTAACCCCAATTTCTGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
3UTR-3UTR GCA 90 bp CTTATGCACAAAGCGGTTGTTGGACAGGTGCTCCATGCCCAGGGCTACCTGGGTGGAGGACAGGGATCTTaGCCATCATGCTGTGAGCTT +
Preference number: 2 (lower is better)
Translates to: LMHKAVVGQVLHAQGYLGGGQGS*PSCCEL
Trigger: AAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCC...ACCCAGGTAGCCCTGGGCATGGAGCACCTGTCCAACAACCGCTTTGTGCATAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
3UTR-3UTR GCA 90 bp CAGATGAGTGGCAGAGTTGGACCCGGTCAAGGGGAGAAGTTGAAGGCCAGAAATCTCAGCAATGCCTGTTaGACTAGGGCAGGGGCCTCA +
Preference number: 2 (lower is better)
Translates to: QMSGRVGPGQGEKLKARNLSNAC*TRAGAS
Trigger: TGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAG...ATTTCTGGCCTTCAACTTCTCCCCTTGACCGGGTCCAACTCTGCCACTCATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
3UTR-3UTR GCA 90 bp CTGGTCAAGGCCACTTCTTCTTGGATCTCTGCTGAGGGCTGCCCGTTCTGCAAAGCAGCCGCTTGGCTTTaGAGCGCTTCTTGCAGTAGA +
Preference number: 2 (lower is better)
Translates to: LVKATSSWISAEGCPFCKAAAWL*SASCSR
Trigger: TCTACTGCAAGAAGCGCTGCAAAGCCAAGCGGCTGC...TTTGCAGAACGGGCAGCCCTCAGCAGAGATCCAAGAAGAAGTGGCCTTGACCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
3UTR-3UTR GCA 90 bp CTAGACCGTGGGAAGTGCATCTTATCACTTGTGCTGTGGCGTTTGTTGGTGGCCATCTCTGCTGAGGGCTaGCCGTTCTGCAAAGGCCCA +
Preference number: 2 (lower is better)
Translates to: LDRGKCILSLVLWRLLVAISAEG*PFCKGP
Trigger: TGGGCCTTTGCAGAACGGGCAGCCCTCAGCAGAGAT...GGCCACCAACAAACGCCACAGCACAAGTGATAAGATGCACTTCCCACGGTCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
3UTR-3UTR GCA 90 bp CTGCAGGCTAGACCGTGGGAAGTGCATCTTATCACTTGTGCTGTGGCGTTTGTTTACCACGTCCTGGGGTaGCAGCACCACCCTGGCAAA +
Preference number: 2 (lower is better)
Translates to: LQARPWEVHLITCAVAFVYHVLG*QHHPGK
Trigger: TTTGCCAGGGTGGTGCTGGCACCCCAGGACGTGGTA...AACAAACGCCACAGCACAAGTGATAAGATGCACTTCCCACGGTCTAGCCTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470019.5
3UTR-3UTR CCA 90 bp CTAGACCGTGGGAAGTGCATCTTATCACTTGTGCTGTGGCGTTTGTTGGTGGCCGCTTCTGCAGCCGCTTaGCTTTGCAGCGCTTCTTGC +
Preference number: 2 (lower is better)
Translates to: LDRGKCILSLVLWRLLVAASAAA*LCSASC
Trigger: GCAAGAAGCGCTGCAAAGCCAAGCGGCTGCAGAAGC...GGCCACCAACAAACGCCACAGCACAAGTGATAAGATGCACTTCCCACGGTCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
3UTR-3UTR GCA 90 bp AGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCCGCAGCCAAGTCCTTATaGACAAAGCGGTTGTTGGAC +
Preference number: 2 (lower is better)
Translates to: RDLAHHAVSFPLEMSSPAAAKSL*TKRLLD
Trigger: GTCCAACAACCGCTTTGTGCATAAGGACTTGGCTGC...GGCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
3UTR-3UTR GCA 90 bp GCCTGCAAATCTGCCAGTACTTCATCATCTGCCTGCCCACCATGGGGCATCTCTCAGTACTTCATCATCTaGCTGCCCACCATGGGGCAT +
Preference number: 2 (lower is better)
Translates to: ACKSASTSSSACPPWGISQYFII*LPTMGH
Trigger: ATGCCCCATGGTGGGCAGGCAGATGATGAAGTACTG...AGAGATGCCCCATGGTGGGCAGGCAGATGATGAAGTACTGGCAGATTTGCAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
3UTR-3UTR CCA 90 bp CTTATGCACAAAGCGGTTGTTGGACAGGTGCTCCATGCCCAGGGCTACCTGGGTTTGAAGGCCAGAAATTaGGGTTACCTGTGGCACCCA +
Preference number: 2 (lower is better)
Translates to: LMHKAVVGQVLHAQGYLGLKARN*GYLWHP
Trigger: TGGGTGCCACAGGTAACCCCAATTTCTGGCCTTCAA...ACCCAGGTAGCCCTGGGCATGGAGCACCTGTCCAACAACCGCTTTGTGCATAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
3UTR-3UTR CCA 90 bp ATGCCCACCCACCCCACGCTGCAATTACATATAAAAGCCGCCCGTGGTGCATACAAGTTGGCAGATGAGTaGCAGAGTTGGACCCGGTCA +
Preference number: 2 (lower is better)
Translates to: MPTHPTLQLHIKAARGAYKLADE*QSWTRS
Trigger: TGACCGGGTCCAACTCTGCCACTCATCTGCCAACTT...GTATGCACCACGGGCGGCTTTTATATGTAATTGCAGCGTGGGGTGGGTGGGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
3UTR-3UTR CCA 90 bp CATGGATCACCAGGGAGCCATTCTGGAAGATGTGCATCCTGGGTCCCAGCTTGGCCACCGACAACCCAATaGTCTGGATCATCTTGTAGG +
Preference number: 2 (lower is better)
Translates to: HGSPGSHSGRCASWVPAWPPTTQ*SGSSCR
Trigger: CCTACAAGATGATCCAGACCATTGGGTTGTCGGTGG...CCAAGCTGGGACCCAGGATGCACATCTTCCAGAATGGCTCCCTGGTGATCCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470019.5
3UTR-3UTR CCA 90 bp CAGGCTAGACCGTGGGAAGTGCATCTTATCACTTGTGCTGTGGCGTTTGTTGGTGCTTCTGCAGCCGCTTaGCTTTGCAGCGCTTCTTGC +
Preference number: 2 (lower is better)
Translates to: QARPWEVHLITCAVAFVGASAAA*LCSASC
Trigger: GCAAGAAGCGCTGCAAAGCCAAGCGGCTGCAGAAGC...ACCAACAAACGCCACAGCACAAGTGATAAGATGCACTTCCCACGGTCTAGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
3UTR-3UTR CCA 90 bp GGCTACAGTTACCAGATACTAAGTGCCTGCCTGGTCCCTGGCAGGTCAAGTCTGCCTGGCCCGTTTAACTaGAAATGGGAGAAGCTGAGG +
Preference number: 2 (lower is better)
Translates to: GYSYQILSACLVPGRSSLPGPFN*KWEKLR
Trigger: CCTCAGCTTCTCCCATTTCCAGTTAAACGGGCCAGG...CAGACTTGACCTGCCAGGGACCAGGCAGGCACTTAGTATCTGGTAACTGTAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476760.1
3UTR-3UTR CCA 90 bp TCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTCCTCTATAATGGCTGGGCTGAGAACTaGCAATGGAACATGGCCTCC +
Preference number: 2 (lower is better)
Translates to: SVCTSPEWGGLTCCVLYNGWAEN*QWNMAS
Trigger: GGAGGCCATGTTCCATTGCCAGTTCTCAGCCCAGCC...ATTATAGAGGACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470019.5
3UTR-3UTR CCA 90 bp CTGCAGGCTAGACCGTGGGAAGTGCATCTTATCACTTGTGCTGTGGCGTTTGTTGCAGCAGAGACCCGTTaGCAAACACTGTGGCTCTGC +
Preference number: 2 (lower is better)
Translates to: LQARPWEVHLITCAVAFVAAETR*QTLWLC
Trigger: GCAGAGCCACAGTGTTTGCCAACGGGTCTCTGCTGC...AACAAACGCCACAGCACAAGTGATAAGATGCACTTCCCACGGTCTAGCCTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470019.5
3UTR CAA 90 bp CTGCTCATACAACGGTACCATGTCCCATCATACACCTCCACGCTGTaGATGCGCAAGGTCCCATTCTTGAAGACCTCGAACCGTGAGTCC +
Preference number: 2 (lower is better)
Translates to: LLIQRYHVPSYTSTL*MRKVPFLKTSNRES
Trigger: GGACTCACGGTTCGAGGTCTTCAAGAATGGGACCTTGCGCATCAACAGCGTGGAGGTGTATGATGGGACATGGTACCGTTGTATGAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470019.5
3UTR-3UTR TCA 90 bp ATGCCCACCCACCCCACGCTGCAATTACATATAAAAGCCGCCCGTGGTGCATACGTCAAGGGGAGAAGTTaGAGGCCAGAAATTGGGGTT +
Preference number: 2 (lower is better)
Translates to: MPTHPTLQLHIKAARGAYVKGRS*RPEIGV
Trigger: AACCCCAATTTCTGGCCTTCAACTTCTCCCCTTGAC...GTATGCACCACGGGCGGCTTTTATATGTAATTGCAGCGTGGGGTGGGTGGGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
3UTR-3UTR GCA 90 bp GCCTGCAAATCTGCCAGTACTTCATCATCTGCCTGCCCACCATGGGGCATCTCTGCAGCCAAGTCCTTATaGACAAAGCGGTTGTTGGAC +
Preference number: 2 (lower is better)
Translates to: ACKSASTSSSACPPWGISAAKSL*TKRLLD
Trigger: GTCCAACAACCGCTTTGTGCATAAGGACTTGGCTGC...AGAGATGCCCCATGGTGGGCAGGCAGATGATGAAGTACTGGCAGATTTGCAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
3UTR-3UTR GCA 90 bp CCAGAAATTGGGGTTACCTGTGGCACCCACACTGTCCCTGATAGAGGAAGAGGTGGAGGACAGGGATCTTaGCCATCATGCTGTGAGCTT +
Preference number: 2 (lower is better)
Translates to: PEIGVTCGTHTVPDRGRGGGQGS*PSCCEL
Trigger: AAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCC...ACCTCTTCCTCTATCAGGGACAGTGTGGGTGCCACAGGTAACCCCAATTTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
3UTR-3UTR CCA 90 bp GAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCACCTTCACTTGTCTCTaGGCACTGACCAGGCAGTTA +
Preference number: 2 (lower is better)
Translates to: EDRDLAHHAVSFPLEMSSTFTCL*ALTRQL
Trigger: TAACTGCCTGGTCAGTGCCCAGAGACAAGTGAAGGT...GGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
3UTR-3UTR CCA 90 bp GTGTGCCCAGAACTTGAGAATATTAAGGAACTCCCCACAAACCCAGCTCATCCCTCAGCCGATAGAGTTTaGAAGGGCAGCCCTCGGGCT +
Preference number: 2 (lower is better)
Translates to: VCPELENIKELPTNPAHPSADRV*KGSPRA
Trigger: AGCCCGAGGGCTGCCCTTCCAAACTCTATCGGCTGA...GGGATGAGCTGGGTTTGTGGGGAGTTCCTTAATATTCTCAAGTTCTGGGCACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
3UTR-3UTR CCA 90 bp ACCAGTGGGCCAAGAGACTCATTAACCCTGTGTGCCCAGAACTTGAGAATATTAACATGGGCACGAATCTaGCCCTGCGGCCCGTTGGAG +
Preference number: 2 (lower is better)
Translates to: TSGPRDSLTLCAQNLRILTWARI*PCGPLE
Trigger: CTCCAACGGGCCGCAGGGCCAGATTCGTGCCCATGT...TAATATTCTCAAGTTCTGGGCACACAGGGTTAATGAGTCTCTTGGCCCACTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470019.5
3UTR CAA 90 bp GGGACCAGTGGGCCAAGAGACTCATTAACCCTGTGTGCCCAGAACTaGAGAATATTAAGGAACTCCCCACAAACCCAGCTCATCCCAAGC +
Preference number: 2 (lower is better)
Translates to: GTSGPRDSLTLCAQN*RILRNSPQTQLIPS
Trigger: GCTTGGGATGAGCTGGGTTTGTGGGGAGTTCCTTAATATTCTCAAGTTCTGGGCACACAGGGTTAATGAGTCTCTTGGCCCACTGGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
3UTR CAA 90 bp GTCCCATCATACACCTCCACGCTGTTGATGCGCAAGGTCCCATTCTaGAAGACCTCGAACCGTGAGTCCTCTGAGATGAGCATCTGGTTT +
Preference number: 2 (lower is better)
Translates to: VPSYTSTLLMRKVPF*KTSNRESSEMSIWF
Trigger: AAACCAGATGCTCATCTCAGAGGACTCACGGTTCGAGGTCTTCAAGAATGGGACCTTGCGCATCAACAGCGTGGAGGTGTATGATGGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470019.5
3UTR-3UTR TCA 90 bp AGGCTAGACCGTGGGAAGTGCATCTTATCACTTGTGCTGTGGCGTTTGTTGGTGCCTTCTGCTTGGTGCTaGGGGGCTGTGACTTCAATT +
Preference number: 2 (lower is better)
Translates to: RLDRGKCILSLVLWRLLVPSAWC*GAVTSI
Trigger: AATTGAAGTCACAGCCCCTCAGCACCAAGCAGAAGG...CACCAACAAACGCCACAGCACAAGTGATAAGATGCACTTCCCACGGTCTAGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470019.5
3UTR-3UTR GCA 90 bp ACCAGTGGGCCAAGAGACTCATTAACCCTGTGTGCCCAGAACTTGAGAATATTACGGTTGTTGGACAGGTaGTCCATGCCCAGGGCTACC +
Preference number: 2 (lower is better)
Translates to: TSGPRDSLTLCAQNLRILRLLDR*SMPRAT
Trigger: GGTAGCCCTGGGCATGGAGCACCTGTCCAACAACCG...TAATATTCTCAAGTTCTGGGCACACAGGGTTAATGAGTCTCTTGGCCCACTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
3UTR-3UTR GCA 90 bp ACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGCTCATTAACCCTGTGTaGCCAGAACTTGAGAATATT +
Preference number: 2 (lower is better)
Translates to: TWVWVSVHKPRVGRTHLLLINPV*PELENI
Trigger: AATATTCTCAAGTTCTGGGCACACAGGGTTAATGAG...CAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
3UTR-3UTR CCA 90 bp CTTGAGAATATTAAGGAACTCCCCACAAACCCAGCTCATCCCAAGCCTAGCCCTTGCACAAGCCCAGAGTaGGGAGGACTCACTTGCTGT +
Preference number: 2 (lower is better)
Translates to: LENIKELPTNPAHPKPSPCTSPE*GGLTCC
Trigger: ACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCA...AGGGCTAGGCTTGGGATGAGCTGGGTTTGTGGGGAGTTCCTTAATATTCTCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
3UTR-3UTR CCA 90 bp ACCAGTGGGCCAAGAGACTCATTAACCCTGTGTGCCCAGAACTTGAGAATATTAGGGAAGACGTGGGTCTaGGTCAGTGTGCACAAGCCC +
Preference number: 2 (lower is better)
Translates to: TSGPRDSLTLCAQNLRILGKTWV*VSVHKP
Trigger: GGGCTTGTGCACACTGACCCAGACCCACGTCTTCCC...TAATATTCTCAAGTTCTGGGCACACAGGGTTAATGAGTCTCTTGGCCCACTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
3UTR-3UTR TCA 90 bp ACCAGTGGGCCAAGAGACTCATTAACCCTGTGTGCCCAGAACTTGAGAATATTAGGCAAAGTTGGCAGATaGGTGGCAGAGTTGGACCCG +
Preference number: 2 (lower is better)
Translates to: TSGPRDSLTLCAQNLRILGKVGR*VAELDP
Trigger: CGGGTCCAACTCTGCCACTCATCTGCCAACTTTGCC...TAATATTCTCAAGTTCTGGGCACACAGGGTTAATGAGTCTCTTGGCCCACTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
3UTR-3UTR TCA 90 bp ATGCCCACCCACCCCACGCTGCAATTACATATAAAAGCCGCCCGTGGTGCATACAGTGTCAAAAGCTCCTaGAAACTCCTTCATCTGCCA +
Preference number: 2 (lower is better)
Translates to: MPTHPTLQLHIKAARGAYSVKSS*KLLHLP
Trigger: TGGCAGATGAAGGAGTTTTCAGGAGCTTTTGACACT...GTATGCACCACGGGCGGCTTTTATATGTAATTGCAGCGTGGGGTGGGTGGGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
3UTR-3UTR GCA 90 bp CAGGCTAGACCGTGGGAAGTGCATCTTATCACTTGTGCTGTGGCGTTTGTTGGTGCAGCCAAGTCCTTATaGACAAAGCGGTTGTTGGAC +
Preference number: 2 (lower is better)
Translates to: QARPWEVHLITCAVAFVGAAKSL*TKRLLD
Trigger: GTCCAACAACCGCTTTGTGCATAAGGACTTGGCTGC...ACCAACAAACGCCACAGCACAAGTGATAAGATGCACTTCCCACGGTCTAGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470019.5
3UTR-3UTR GCA 90 bp AAAGCCGCCCGTGGTGCATACAAAAAGGGCGGTTTATATAGTGTCAAAAGCTCCGGTGGCAGGGAAAACTaGCCAGCTCAAAGCCCTAGT +
Preference number: 2 (lower is better)
Translates to: KAARGAYKKGGLYSVKSSGGREN*PAQSPS
Trigger: ACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCCACC...GGAGCTTTTGACACTATATAAACCGCCCTTTTTGTATGCACCACGGGCGGCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
3UTR-3UTR CCA 90 bp AAAGCCGCCCGTGGTGCATACAAAAAGGGCGGTTTATATAGTGTCAAAAGCTCCTGCACAAGCCCAGAGTaGGGAGGACTCACTTGCTGT +
Preference number: 2 (lower is better)
Translates to: KAARGAYKKGGLYSVKSSCTSPE*GGLTCC
Trigger: ACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCA...GGAGCTTTTGACACTATATAAACCGCCCTTTTTGTATGCACCACGGGCGGCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
3UTR-3UTR CCA 90 bp CCAAGCTGGTCAAGGCCACTTCTTCTTGGATCTCTGCTGAGGGCTGCCCGTTCTAGGCTTGTCGACCGTTaGATGTTAAATAAACGACAG +
Preference number: 2 (lower is better)
Translates to: PSWSRPLLLGSLLRAARSRLVDR*MLNKRQ
Trigger: CTGTCGTTTATTTAACATCCAACGGTCGACAAGCCT...AGAACGGGCAGCCCTCAGCAGAGATCCAAGAAGAAGTGGCCTTGACCAGCTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461100.5
3UTR-3UTR CCA 90 bp ACTTCTTCTTGGATCTCTGCTGAGGGCTGCCCGTTCTGCAAAGGCCCACCGTTGGCACAGGCTTGTCGTTaGATGTTAAATAAACGACAG +
Preference number: 2 (lower is better)
Translates to: TSSWISAEGCPFCKGPPLAQACR*MLNKRQ
Trigger: CTGTCGTTTATTTAACATCCAACGACAAGCCTGTGC...CAACGGTGGGCCTTTGCAGAACGGGCAGCCCTCAGCAGAGATCCAAGAAGAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497957.1
3UTR CAA 90 bp ACCTTCTGCTTGGTGCTGAGGGGCTGTGACTTCAATTTTTCATCCTaGCTCTTGGAAATCCTCAGGAACTGCTTGAGGTCTCCCAGATCC +
Preference number: 2 (lower is better)
Translates to: TFCLVLRGCDFNFSS*LLEILRNCLRSPRS
Trigger: GGATCTGGGAGACCTCAAGCAGTTCCTGAGGATTTCCAAGAGCAAGGATGAAAAATTGAAGTCACAGCCCCTCAGCACCAAGCAGAAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470019.5
3UTR-3UTR TCA 90 bp ACCAGTGGGCCAAGAGACTCATTAACCCTGTGTGCCCAGAACTTGAGAATATTAGCCAGGCACTTAGGATaGGGAAAGGAGAGAAGGGTG +
Preference number: 2 (lower is better)
Translates to: TSGPRDSLTLCAQNLRILARHLG*GKERRV
Trigger: CACCCTTCTCTCCTTTCCTCATCCTAAGTGCCTGGC...TAATATTCTCAAGTTCTGGGCACACAGGGTTAATGAGTCTCTTGGCCCACTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
3UTR-3UTR GCA 90 bp GTGTGCCCAGAACTTGAGAATATTAAGGAACTCCCCACAAACCCAGCTCATCCCCTAGCCTTCCCAGCCTaGAAATCTGCCAGTACTTCA +
Preference number: 2 (lower is better)
Translates to: VCPELENIKELPTNPAHPLAFPA*KSASTS
Trigger: TGAAGTACTGGCAGATTTGCAGGCTGGGAAGGCTAG...GGGATGAGCTGGGTTTGTGGGGAGTTCCTTAATATTCTCAAGTTCTGGGCACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
3UTR-3UTR GCA 90 bp ACCAGTGGGCCAAGAGACTCATTAACCCTGTGTGCCCAGAACTTGAGAATATTAGGTGGCAGGGAAAACTaGCCAGCTCAAAGCCCTAGT +
Preference number: 2 (lower is better)
Translates to: TSGPRDSLTLCAQNLRILGGREN*PAQSPS
Trigger: ACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCCACC...TAATATTCTCAAGTTCTGGGCACACAGGGTTAATGAGTCTCTTGGCCCACTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
3UTR-3UTR CCA 90 bp GTGTGCCCAGAACTTGAGAATATTAAGGAACTCCCCACAAACCCAGCTCATCCCTTGAAGGCCAGAAATTaGGGTTACCTGTGGCACCCA +
Preference number: 2 (lower is better)
Translates to: VCPELENIKELPTNPAHPLKARN*GYLWHP
Trigger: TGGGTGCCACAGGTAACCCCAATTTCTGGCCTTCAA...GGGATGAGCTGGGTTTGTGGGGAGTTCCTTAATATTCTCAAGTTCTGGGCACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
3UTR-3UTR CCA 90 bp ACCAGTGGGCCAAGAGACTCATTAACCCTGTGTGCCCAGAACTTGAGAATATTAGATGAGTGGCAGAGTTaGACCCGGTCAAGGGGAGAA +
Preference number: 2 (lower is better)
Translates to: TSGPRDSLTLCAQNLRILDEWQS*TRSRGE
Trigger: TTCTCCCCTTGACCGGGTCCAACTCTGCCACTCATC...TAATATTCTCAAGTTCTGGGCACACAGGGTTAATGAGTCTCTTGGCCCACTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
3UTR-3UTR CCA 90 bp AAAGCCGCCCGTGGTGCATACAAAAAGGGCGGTTTATATAGTGTCAAAAGCTCCAAGTTGGCAGATGAGTaGCAGAGTTGGACCCGGTCA +
Preference number: 2 (lower is better)
Translates to: KAARGAYKKGGLYSVKSSKLADE*QSWTRS
Trigger: TGACCGGGTCCAACTCTGCCACTCATCTGCCAACTT...GGAGCTTTTGACACTATATAAACCGCCCTTTTTGTATGCACCACGGGCGGCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
3UTR-3UTR GCA 90 bp CTTGAGAATATTAAGGAACTCCCCACAAACCCAGCTCATCCCAAGCCTAGCCCTCTAGACCGTGGGAAGTaGATCTTATCACTTGTGCTG +
Preference number: 2 (lower is better)
Translates to: LENIKELPTNPAHPKPSPLDRGK*ILSLVL
Trigger: CAGCACAAGTGATAAGATGCACTTCCCACGGTCTAG...AGGGCTAGGCTTGGGATGAGCTGGGTTTGTGGGGAGTTCCTTAATATTCTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470019.5
3UTR-3UTR CCA 90 bp CTTGAGAATATTAAGGAACTCCCCACAAACCCAGCTCATCCCAAGCCTAGCCCTACAACAATAAAAGTGTaGGGTAAGGATGGCCCACCC +
Preference number: 2 (lower is better)
Translates to: LENIKELPTNPAHPKPSPTTIKV*GKDGPP
Trigger: GGGTGGGCCATCCTTACCCCACACTTTTATTGTTGT...AGGGCTAGGCTTGGGATGAGCTGGGTTTGTGGGGAGTTCCTTAATATTCTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
3UTR-3UTR GCA 90 bp AAAGCCGCCCGTGGTGCATACAAAAAGGGCGGTTTATATAGTGTCAAAAGCTCCGAAAACTCCTTCATCTaGCAGGCACTTAGGATGAGG +
Preference number: 2 (lower is better)
Translates to: KAARGAYKKGGLYSVKSSENSFI*QALRMR
Trigger: CCTCATCCTAAGTGCCTGGCAGATGAAGGAGTTTTC...GGAGCTTTTGACACTATATAAACCGCCCTTTTTGTATGCACCACGGGCGGCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
3UTR-3UTR GCA 90 bp AGTTACCAGATACTAAGTGCCTGCCTGGTCCCTGGCAGGTCAAGTCTGACACTTAAAGCTGATGATAAATaGATTCTGCCTGGCCCGTTT +
Preference number: 2 (lower is better)
Translates to: SYQILSACLVPGRSSLTLKADDK*ILPGPF
Trigger: AAACGGGCCAGGCAGAATGCATTTATCATCAGCTTT...AAGTGTCAGACTTGACCTGCCAGGGACCAGGCAGGCACTTAGTATCTGGTAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476760.1
3UTR-3UTR CCA 90 bp ACCAGTGGGCCAAGAGACTCATTAACCCTGTGTGCCCAGAACTTGAGAATATTATTGAAGGCCAGAAATTaGGGTTACCTGTGGCACCCA +
Preference number: 2 (lower is better)
Translates to: TSGPRDSLTLCAQNLRILLKARN*GYLWHP
Trigger: TGGGTGCCACAGGTAACCCCAATTTCTGGCCTTCAA...TAATATTCTCAAGTTCTGGGCACACAGGGTTAATGAGTCTCTTGGCCCACTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
3UTR-3UTR CCA 90 bp ACCAGTGGGCCAAGAGACTCATTAACCCTGTGTGCCCAGAACTTGAGAATATTATATAAAAGCCGCCCGTaGTGCATACAAAAAGGGCGG +
Preference number: 2 (lower is better)
Translates to: TSGPRDSLTLCAQNLRILYKSRP*CIQKGR
Trigger: CCGCCCTTTTTGTATGCACCACGGGCGGCTTTTATA...TAATATTCTCAAGTTCTGGGCACACAGGGTTAATGAGTCTCTTGGCCCACTGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
3UTR-3UTR GCA 90 bp ACCAGTGGGCCAAGAGACTCATTAACCCTGTGTGCCCAGAACTTGAGAATATTACAATGCAAGTGTAGTTaGCAGCGTCATCTCGAGTCA +
Preference number: 2 (lower is better)
Translates to: TSGPRDSLTLCAQNLRILQCKCS*QRHLES
Trigger: TGACTCGAGATGACGCTGGCAACTACACTTGCATTG...TAATATTCTCAAGTTCTGGGCACACAGGGTTAATGAGTCTCTTGGCCCACTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470019.5
3UTR-3UTR GCA 90 bp CTTGAGAATATTAAGGAACTCCCCACAAACCCAGCTCATCCCAAGCCTAGCCCTCTCATTAACCCTGTGTaGCCAGAACTTGAGAATATT +
Preference number: 2 (lower is better)
Translates to: LENIKELPTNPAHPKPSPLINPV*PELENI
Trigger: AATATTCTCAAGTTCTGGGCACACAGGGTTAATGAG...AGGGCTAGGCTTGGGATGAGCTGGGTTTGTGGGGAGTTCCTTAATATTCTCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
3UTR-3UTR GCA 90 bp ACCAGTGGGCCAAGAGACTCATTAACCCTGTGTGCCCAGAACTTGAGAATATTACTCATTAACCCTGTGTaGCCAGAACTTGAGAATATT +
Preference number: 2 (lower is better)
Translates to: TSGPRDSLTLCAQNLRILLINPV*PELENI
Trigger: AATATTCTCAAGTTCTGGGCACACAGGGTTAATGAG...TAATATTCTCAAGTTCTGGGCACACAGGGTTAATGAGTCTCTTGGCCCACTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
3UTR-3UTR CCA 90 bp CCTGATATAAAGGGTTTATCATGTGTACTTTCAGTCATATGTCTTGCTTTTCTCTGTCACTATTTCCTCTaGAGCACCCACCCTAACCCC +
Preference number: 2 (lower is better)
Translates to: PDIKGLSCVLSVICLAFLCHYFL*STHPNP
Trigger: GGGGTTAGGGTGGGTGCTCCAGAGGAAATAGTGACA...GAGAAAAGCAAGACATATGACTGAAAGTACACATGATAAACCCTTTATATCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471863.5
3UTR-3UTR TCA 90 bp CCTGATATAAAGGGTTTATCATGTGTACTTTCAGTCATATGTCTTGCTTTTCTCAGGACCATTTTTCTGTaGGGGCTGTCACTATTTCCT +
Preference number: 2 (lower is better)
Translates to: PDIKGLSCVLSVICLAFLRTIFL*GLSLFP
Trigger: AGGAAATAGTGACAGCCCTCACAGAAAAATGGTCCT...GAGAAAAGCAAGACATATGACTGAAAGTACACATGATAAACCCTTTATATCAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000471863.5
3UTR GCA 72 bp TGGCCAACACCAGCTCGTGGCCCTTCTGGTAGACCCTaGCATGGGTGGGCAGCCGGACTCCCGCGTGCTCCC +
Preference number: 3 (lower is better)
Translates to: WPTPARGPSGRP*HGWAAGLPRAP
Trigger: GGGAGCACGCGGGAGTCCGGCTGCCCACCCATGGCAGGGTCTACCAGAAGGGCCACGAGCTGGTGTTGGCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470019.5
3UTR CCA 72 bp CGTGCTCCCACCACACGCTGGGCTCTGGCAGACCCTTaGGGGGAAGGCAGGTCACACGCTCCTCGCTGCCAG +
Preference number: 3 (lower is better)
Translates to: RAPTTRWALADP*GEGRSHAPRCQ
Trigger: CTGGCAGCGAGGAGCGTGTGACCTGCCTTCCCCCCAAGGGTCTGCCAGAGCCCAGCGTGTGGTGGGAGCACG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470019.5
3UTR-3UTR CAA 90 bp GCCAGGAACACCTCCCCAAACTCACTCTTCCCCAGCGTGGTGATGGGCTGCAGGGTGCTGTGGCGTTTGTaGGTGGCCGCGGGGCCGGAG +
Preference number: 3 (lower is better)
Translates to: ARNTSPNSLFPSVVMGCRVLWRL*VAAGPE
Trigger: CTCCGGCCCCGCGGCCACCAACAAACGCCACAGCAC...CCTGCAGCCCATCACCACGCTGGGGAAGAGTGAGTTTGGGGAGGTGTTCCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
3UTR GCA 72 bp GCCCCTCTGCCCCTGGCCAATGCAGCGGTAGATCCCTaGATTGCGTGGCCGGACCTGGGTCAGCAGCAGAGA +
Preference number: 3 (lower is better)
Translates to: APLPLANAAVDP*IAWPDLGQQQR
Trigger: TCTCTGCTGCTGACCCAGGTCCGGCCACGCAATGCAGGGATCTACCGCTGCATTGGCCAGGGGCAGAGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470019.5
3UTR CCA 72 bp TCCCGGCACAGCCCCAGGAGCCGCACCACGTTGGCGTaGTTCAGCTTCCCAAACATCTCCAACTCCCTCCGG +
Preference number: 3 (lower is better)
Translates to: SRHSPRSRTTLA*FSFPNISNSLR
Trigger: CCGGAGGGAGTTGGAGATGTTTGGGAAGCTGAACCACGCCAACGTGGTGCGGCTCCTGGGGCTGTGCCGGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470019.5
ENST00000497957.1
3UTR-3UTR CAA 90 bp TGCTGTGGCGTTTGTTGGTGGCCGCGGGGCCGGAGCCCAAGCTGGTCAAGGCCATGCAAAGGCCCACCGTaGAGGCATTCCATCTCTGGC +
Preference number: 3 (lower is better)
Translates to: CCGVCWWPRGRSPSWSRPCKGPP*RHSISG
Trigger: GCCAGAGATGGAATGCCTCAACGGTGGGCCTTTGCA...TGGCCTTGACCAGCTTGGGCTCCGGCCCCGCGGCCACCAACAAACGCCACAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
3UTR-3UTR CAA 90 bp CACTCCCTCCTCCAAGCCCTGAGCCTTTGCCAGGAACACCTCCCCAAACTCACTGTGCTGTGGCGTTTGTaGGTGGCCGCGGGGCCGGAG +
Preference number: 3 (lower is better)
Translates to: HSLLQALSLCQEHLPKLTVLWRL*VAAGPE
Trigger: CTCCGGCCCCGCGGCCACCAACAAACGCCACAGCAC...AGTGAGTTTGGGGAGGTGTTCCTGGCAAAGGCTCAGGGCTTGGAGGAGGGAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
3UTR CCA 72 bp GGCGTTTGTTGGTGGCCGCGGGGCCGGAGCCCAAGCTaGTCAAGGCCACTTCTTCTTGGATCTCTGCTGAGG +
Preference number: 3 (lower is better)
Translates to: GVCWWPRGRSPS*SRPLLLGSLLR
Trigger: CCTCAGCAGAGATCCAAGAAGAAGTGGCCTTGACCAGCTTGGGCTCCGGCCCCGCGGCCACCAACAAACGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
3UTR-3UTR CAA 90 bp TCCAGGATGGCCTCGGGGGACATCCAGCGCAGCGGCACCCAGGCCTGGCGGAAGTTATGCACAAAGCGGTaGTTGGACAGGTGCTCCATG +
Preference number: 3 (lower is better)
Translates to: SRMASGDIQRSGTQAWRKLCTKR*LDRCSM
Trigger: CATGGAGCACCTGTCCAACAACCGCTTTGTGCATAA...CTTCCGCCAGGCCTGGGTGCCGCTGCGCTGGATGTCCCCCGAGGCCATCCTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
3UTR-3UTR CAA 90 bp GCGTTTGTTGGTGGCCGCGGGGCCGGAGCCCAAGCTGGTCAAGGCCACTTCTTCTCCTCCGGCACAGGCTaGTCTGAGAGACACACAGAT +
Preference number: 3 (lower is better)
Translates to: AFVGGRGAGAQAGQGHFFSSGTG*SERHTD
Trigger: ATCTGTGTGTCTCTCAGACAAGCCTGTGCCGGAGGA...GAAGAAGTGGCCTTGACCAGCTTGGGCTCCGGCCCCGCGGCCACCAACAAACGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494146.5
3UTR GCA 72 bp GCTTTTCCAGCACTTGGACACGGGCTTGCGCCTCGATaGTGCCGGCTGGGGTGCTGCTCATACAACGGTACC +
Preference number: 3 (lower is better)
Translates to: AFPALGHGLAPR*CRLGCCSYNGT
Trigger: GGTACCGTTGTATGAGCAGCACCCCAGCCGGCAGCATCGAGGCGCAAGCCCGTGTCCAAGTGCTGGAAAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470019.5
3UTR GCA 72 bp GGGCACGAATCTGGCCCTGCGGCCCGTTGGAGGCAATaGAAGTGTAGTTGCCAGCGTCATCTCGAGTCACCC +
Preference number: 3 (lower is better)
Translates to: GHESGPAARWRQ*KCSCQRHLESP
Trigger: GGGTGACTCGAGATGACGCTGGCAACTACACTTGCATTGCCTCCAACGGGCCGCAGGGCCAGATTCGTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470019.5
3UTR CCA 72 bp CGGTTGTTGGACAGGTGCTCCATGCCCAGGGCTACCTaGGTGCATAGGGCCACCTTCTGCTTGGTGCTGAGG +
Preference number: 3 (lower is better)
Translates to: RLLDRCSMPRAT*VHRATFCLVLR
Trigger: CCTCAGCACCAAGCAGAAGGTGGCCCTATGCACCCAGGTAGCCCTGGGCATGGAGCACCTGTCCAACAACCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
3UTR CCA 72 bp CACTTGGACACGGGCTTGCGCCTCGATGCTGCCGGCTaGGGTGCTGCTCATACAACGGTACCATGTCCCATC +
Preference number: 3 (lower is better)
Translates to: HLDTGLRLDAAG*GAAHTTVPCPI
Trigger: GATGGGACATGGTACCGTTGTATGAGCAGCACCCCAGCCGGCAGCATCGAGGCGCAAGCCCGTGTCCAAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470019.5
3UTR-3UTR CAA 90 bp GTGGGGAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCCTCCCCAGGCAAAGTaGGCAGATGAGTGGCAGAGT +
Preference number: 3 (lower is better)
Translates to: VGKTWVWVSVHKPRVGRTPPQAK*ADEWQS
Trigger: ACTCTGCCACTCATCTGCCAACTTTGCCTGGGGAGG...AGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTCCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
3UTR-3UTR CAA 90 bp GCCAGGAACACCTCCCCAAACTCACTCTTCCCCAGCGTGGTGATGGGCTGCAGGTGCAAAGGCCCACCGTaGAGGCATTCCATCTCTGGC +
Preference number: 3 (lower is better)
Translates to: ARNTSPNSLFPSVVMGCRCKGPP*RHSISG
Trigger: GCCAGAGATGGAATGCCTCAACGGTGGGCCTTTGCA...CCTGCAGCCCATCACCACGCTGGGGAAGAGTGAGTTTGGGGAGGTGTTCCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
3UTR-3UTR CAA 90 bp GCCCAGACATCAGACTTGGTAGAGAAGTCACCCTCCAGGATGGCCTCGGGGGACGAGCTTTTCCAGCACTaGGACACGGGCTTGCGCCTC +
Preference number: 3 (lower is better)
Translates to: AQTSDLVEKSPSRMASGDELFQH*DTGLRL
Trigger: GAGGCGCAAGCCCGTGTCCAAGTGCTGGAAAAGCTC...GTCCCCCGAGGCCATCCTGGAGGGTGACTTCTCTACCAAGTCTGATGTCTGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470019.5
3UTR GCA 72 bp TTGAGGCATTCCATCTCTGGCTCCTCGCCCTCGGGCTaGTTCTGCAGCCGCTTGGCTTTGCAGCGCTTCTTG +
Preference number: 3 (lower is better)
Translates to: LRHSISGSSPSG*FCSRLALQRFL
Trigger: CAAGAAGCGCTGCAAAGCCAAGCGGCTGCAGAAGCAGCCCGAGGGCGAGGAGCCAGAGATGGAATGCCTCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
3UTR GCA 72 bp CACGGGCTTGCGCCTCGATGCTGCCGGCTGGGGTGCTaGTCATACAACGGTACCATGTCCCATCATACACCT +
Preference number: 3 (lower is better)
Translates to: HGLAPRCCRLGC*SYNGTMSHHTP
Trigger: AGGTGTATGATGGGACATGGTACCGTTGTATGAGCAGCACCCCAGCCGGCAGCATCGAGGCGCAAGCCCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470019.5
3UTR GCA 72 bp GGACACGGGCTTGCGCCTCGATGCTGCCGGCTGGGGTaGTGCTCATACAACGGTACCATGTCCCATCATACA +
Preference number: 3 (lower is better)
Translates to: GHGLAPRCCRLG*CSYNGTMSHHT
Trigger: TGTATGATGGGACATGGTACCGTTGTATGAGCAGCACCCCAGCCGGCAGCATCGAGGCGCAAGCCCGTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470019.5
3UTR GCA 72 bp TTTCCAGCACTTGGACACGGGCTTGCGCCTCGATGCTaGCGGCTGGGGTGCTGCTCATACAACGGTACCATG +
Preference number: 3 (lower is better)
Translates to: FPALGHGLAPRC*RLGCCSYNGTM
Trigger: CATGGTACCGTTGTATGAGCAGCACCCCAGCCGGCAGCATCGAGGCGCAAGCCCGTGTCCAAGTGCTGGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470019.5
3UTR CCA 72 bp TTGCTGAGGCCCAGGGCAGACACCTTCACTTGTCTCTaGGCACTGACCAGGCAGTTACGCGCAGCCAAGTCC +
Preference number: 3 (lower is better)
Translates to: LLRPRADTFTCL*ALTRQLRAAKS
Trigger: GGACTTGGCTGCGCGTAACTGCCTGGTCAGTGCCCAGAGACAAGTGAAGGTGTCTGCCCTGGGCCTCAGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
3UTR CCA 72 bp AGTGCATCTTATCACTTGTGCTGTGGCGTTTGTTGGTaGCCGCGGGGCCGGAGCCCAAGCTGGTCAAGGCCA +
Preference number: 3 (lower is better)
Translates to: SASYHLCCGVCW*PRGRSPSWSRP
Trigger: TGGCCTTGACCAGCTTGGGCTCCGGCCCCGCGGCCACCAACAAACGCCACAGCACAAGTGATAAGATGCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
3UTR CCA 72 bp GGAAGTGCATCTTATCACTTGTGCTGTGGCGTTTGTTaGTGGCCGCGGGGCCGGAGCCCAAGCTGGTCAAGG +
Preference number: 3 (lower is better)
Translates to: GSASYHLCCGVC*WPRGRSPSWSR
Trigger: CCTTGACCAGCTTGGGCTCCGGCCCCGCGGCCACCAACAAACGCCACAGCACAAGTGATAAGATGCACTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
3UTR CCA 72 bp CTAGACCGTGGGAAGTGCATCTTATCACTTGTGCTGTaGCGTTTGTTGGTGGCCGCGGGGCCGGAGCCCAAG +
Preference number: 3 (lower is better)
Translates to: LDRGKCILSLVL*RLLVAAGPEPK
Trigger: CTTGGGCTCCGGCCCCGCGGCCACCAACAAACGCCACAGCACAAGTGATAAGATGCACTTCCCACGGTCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
3UTR CCA 72 bp TGCCTGCCTGGTCCCTGGCAGGTCAAGTCTGACACTTaGCCAAGGGCTCGGCCGCCCTTTCCATTTGCACAA +
Preference number: 3 (lower is better)
Translates to: CLPGPWQVKSDT*PRARPPFPFAQ
Trigger: TTGTGCAAATGGAAAGGGCGGCCGAGCCCTTGGCCAAGTGTCAGACTTGACCTGCCAGGGACCAGGCAGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476760.1
3UTR CCA 72 bp TCGGGGGTGGCTGGGCTGAGAACTGGCAATGGAACATaGCCTCCTCATACCTCGCTACTACCACGTCCTGGG +
Preference number: 3 (lower is better)
Translates to: SGVAGLRTGNGT*PPHTSLLPRPG
Trigger: CCCAGGACGTGGTAGTAGCGAGGTATGAGGAGGCCATGTTCCATTGCCAGTTCTCAGCCCAGCCACCCCCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470019.5
3UTR-3UTR CAA 90 bp GCCCAGACATCAGACTTGGTAGAGAAGTCACCCTCCAGGATGGCCTCGGGGGACTGCACAAAGCGGTTGTaGGACAGGTGCTCCATGCCC +
Preference number: 3 (lower is better)
Translates to: AQTSDLVEKSPSRMASGDCTKRL*DRCSMP
Trigger: GGGCATGGAGCACCTGTCCAACAACCGCTTTGTGCA...GTCCCCCGAGGCCATCCTGGAGGGTGACTTCTCTACCAAGTCTGATGTCTGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
3UTR-3UTR CAA 90 bp AGCGCTGCATCAGCCGATAGAGTTTGGAAGGGCAGCCCTCGGGCTGAGGAAGTCAGCAGCAGAGACCCGTaGGCAAACACTGTGGCTCTG +
Preference number: 3 (lower is better)
Translates to: SAASADRVWKGSPRAEEVSSRDP*ANTVAL
Trigger: CAGAGCCACAGTGTTTGCCAACGGGTCTCTGCTGCT...GACTTCCTCAGCCCGAGGGCTGCCCTTCCAAACTCTATCGGCTGATGCAGCGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470019.5
3UTR TCA 72 bp GGCCCAGGGCAGACACCTTCACTTGTCTCTGGGCACTaGCCAGGCAGTTACGCGCAGCCAAGTCCTTATGCA +
Preference number: 3 (lower is better)
Translates to: GPGQTPSLVSGH*PGSYAQPSPYA
Trigger: TGCATAAGGACTTGGCTGCGCGTAACTGCCTGGTCAGTGCCCAGAGACAAGTGAAGGTGTCTGCCCTGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
3UTR GCA 72 bp CGGTTAGTGATGGGAGTCTCATCCTCAAAGAGCCACTaGAGGCTCGGGGGTGGCTGGGCTGAGAACTGGCAA +
Preference number: 3 (lower is better)
Translates to: RLVMGVSSSKSH*RLGGGWAENWQ
Trigger: TTGCCAGTTCTCAGCCCAGCCACCCCCGAGCCTGCAGTGGCTCTTTGAGGATGAGACTCCCATCACTAACCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470019.5
3UTR GCA 72 bp GTGAACTTGAGCTTTTCCAGCACTTGGACACGGGCTTaGGCCTCGATGCTGCCGGCTGGGGTGCTGCTCATA +
Preference number: 3 (lower is better)
Translates to: VNLSFSSTWTRA*ASMLPAGVLLI
Trigger: TATGAGCAGCACCCCAGCCGGCAGCATCGAGGCGCAAGCCCGTGTCCAAGTGCTGGAAAAGCTCAAGTTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470019.5
3UTR CCA 72 bp TACGCGCAGCCAAGTCCTTATGCACAAAGCGGTTGTTaGACAGGTGCTCCATGCCCAGGGCTACCTGGGTGC +
Preference number: 3 (lower is better)
Translates to: YAQPSPYAQSGC*TGAPCPGLPGC
Trigger: GCACCCAGGTAGCCCTGGGCATGGAGCACCTGTCCAACAACCGCTTTGTGCATAAGGACTTGGCTGCGCGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
3UTR-3UTR CAA 90 bp GGCAGGGAAAACTGCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTCTGCACAAAGCGGTTGTaGGACAGGTGCTCCATGCCC +
Preference number: 3 (lower is better)
Translates to: GRENCPAQSPSRPVWVQVCTKRL*DRCSMP
Trigger: GGGCATGGAGCACCTGTCCAACAACCGCTTTGTGCA...GACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
3UTR-3UTR CAA 90 bp GGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCTCCCTCCTCACGGCTaGCTGTCCACGGTGCTGTCT +
Preference number: 3 (lower is better)
Translates to: GGQGSCPSCCELPSRDVLLPPHG*LSTVLS
Trigger: AGACAGCACCGTGGACAGCAAGCCGTGAGGAGGGAG...GAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
3UTR-3UTR CAA 90 bp GGAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTGTTGAAGGCCAGAAATaGGGGTTACCTGTGGCACCC +
Preference number: 3 (lower is better)
Translates to: GRRGSGSVCTSPEWGGLTVEGQK*GLPVAP
Trigger: GGGTGCCACAGGTAACCCCAATTTCTGGCCTTCAAC...AGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
3UTR-3UTR CAA 90 bp CTCATCCTTGCTCTGCAGGCTCTTCACAAGTACCAGGGTCTCTGCCACTCCCTCTGCAAAGGCCCACCGTaGAGGCATTCCATCTCTGGC +
Preference number: 3 (lower is better)
Translates to: LILALQALHKYQGLCHSLCKGPP*RHSISG
Trigger: GCCAGAGATGGAATGCCTCAACGGTGGGCCTTTGCA...GAGGGAGTGGCAGAGACCCTGGTACTTGTGAAGAGCCTGCAGAGCAAGGATGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470019.5
ENST00000497957.1
3UTR TCA 72 bp CAAGCTGGTCAAGGCCACTTCTTCTTGGATCTCTGCTaGGGGCTGCCCGTTCTGCAAAGGCCCACCGTTGAG +
Preference number: 3 (lower is better)
Translates to: QAGQGHFFLDLC*GLPVLQRPTVE
Trigger: CTCAACGGTGGGCCTTTGCAGAACGGGCAGCCCTCAGCAGAGATCCAAGAAGAAGTGGCCTTGACCAGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
3UTR GCA 72 bp CCTTATGCACAAAGCGGTTGTTGGACAGGTGCTCCATaGCCAGGGCTACCTGGGTGCATAGGGCCACCTTCT +
Preference number: 3 (lower is better)
Translates to: PYAQSGCWTGAP*PGLPGCIGPPS
Trigger: AGAAGGTGGCCCTATGCACCCAGGTAGCCCTGGGCATGGAGCACCTGTCCAACAACCGCTTTGTGCATAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
3UTR GCA 72 bp GCACTGACCAGGCAGTTACGCGCAGCCAAGTCCTTATaGACAAAGCGGTTGTTGGACAGGTGCTCCATGCCC +
Preference number: 3 (lower is better)
Translates to: ALTRQLRAAKSL*TKRLLDRCSMP
Trigger: GGGCATGGAGCACCTGTCCAACAACCGCTTTGTGCATAAGGACTTGGCTGCGCGTAACTGCCTGGTCAGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
3UTR GCA 72 bp GTCAAGGCCACTTCTTCTTGGATCTCTGCTGAGGGCTaGCCGTTCTGCAAAGGCCCACCGTTGAGGCATTCC +
Preference number: 3 (lower is better)
Translates to: VKATSSWISAEG*PFCKGPPLRHS
Trigger: GGAATGCCTCAACGGTGGGCCTTTGCAGAACGGGCAGCCCTCAGCAGAGATCCAAGAAGAAGTGGCCTTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
3UTR GCA 72 bp CAGGGCACCGTGGCCTCCTTGTCAAACTCCATGCACTaGTGTGGCTGGGGTGGTGGTGTGAACTTGAGCTTT +
Preference number: 3 (lower is better)
Translates to: QGTVASLSNSMH*CGWGGGVNLSF
Trigger: AAAGCTCAAGTTCACACCACCACCCCAGCCACAGCAGTGCATGGAGTTTGACAAGGAGGCCACGGTGCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470019.5
3UTR GCA 72 bp ACTCCCTCCGGAAGTCCAGCTGCTGCTGCTCATCCTTaGTCTGCAGGCTCTTCACAAGTACCAGGGTCTCTG +
Preference number: 3 (lower is better)
Translates to: TPSGSPAAAAHP*SAGSSQVPGSL
Trigger: CAGAGACCCTGGTACTTGTGAAGAGCCTGCAGAGCAAGGATGAGCAGCAGCAGCTGGACTTCCGGAGGGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470019.5
ENST00000497957.1
3UTR-3UTR CAA 90 bp CCAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCTGCAAAGGCCCACCGTaGAGGCATTCCATCTCTGGC +
Preference number: 3 (lower is better)
Translates to: PGGQGSCPSCCELPSRDVCKGPP*RHSISG
Trigger: GCCAGAGATGGAATGCCTCAACGGTGGGCCTTTGCA...GACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470019.5
3UTR GCA 72 bp AGGCTGAGGCTGGGGCTACAGTTACCAGATACTAAGTaGCTGCCTGGTCCCTGGCAGGTCAAGTCTGACACT +
Preference number: 3 (lower is better)
Translates to: RLRLGLQLPDTK*LPGPWQVKSDT
Trigger: AGTGTCAGACTTGACCTGCCAGGGACCAGGCAGGCACTTAGTATCTGGTAACTGTAGCCCCAGCCTCAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476760.1
3UTR CCA 72 bp GAAAACTGCCCAGCTCAAAGCCCTAGTCGCCCAGTTTaGGTCCAAGTCAGCCTCCCAAAGGATGAGGGTGAG +
Preference number: 3 (lower is better)
Translates to: ENCPAQSPSRPV*VQVSLPKDEGE
Trigger: CTCACCCTCATCCTTTGGGAGGCTGACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGCAGTTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
3UTR CCA 72 bp CTTCCCCAGCGTGGTGATGGGCTGCAGGCTAGACCGTaGGAAGTGCATCTTATCACTTGTGCTGTGGCGTTT +
Preference number: 3 (lower is better)
Translates to: LPQRGDGLQARP*EVHLITCAVAF
Trigger: AAACGCCACAGCACAAGTGATAAGATGCACTTCCCACGGTCTAGCCTGCAGCCCATCACCACGCTGGGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
3UTR CCA 72 bp CTACAGTTACCAGATACTAAGTGCCTGCCTGGTCCCTaGCAGGTCAAGTCTGACACTTGGCCAAGGGCTCGG +
Preference number: 3 (lower is better)
Translates to: LQLPDTKCLPGP*QVKSDTWPRAR
Trigger: CCGAGCCCTTGGCCAAGTGTCAGACTTGACCTGCCAGGGACCAGGCAGGCACTTAGTATCTGGTAACTGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476760.1
3UTR CCA 72 bp CACCGTGGCCTCCTTGTCAAACTCCATGCACTGCTGTaGCTGGGGTGGTGGTGTGAACTTGAGCTTTTCCAG +
Preference number: 3 (lower is better)
Translates to: HRGLLVKLHALL*LGWWCELELFQ
Trigger: CTGGAAAAGCTCAAGTTCACACCACCACCCCAGCCACAGCAGTGCATGGAGTTTGACAAGGAGGCCACGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470019.5
3UTR CCA 72 bp CATTCTGGAAGATGTGCATCCTGGGTCCCAGCTTGGTaGGGTCCAGGATGCGGTCCTTGCCTTTCCACTGAA +
Preference number: 3 (lower is better)
Translates to: HSGRCASWVPAW*GPGCGPCLSTE
Trigger: TTCAGTGGAAAGGCAAGGACCGCATCCTGGACCCCACCAAGCTGGGACCCAGGATGCACATCTTCCAGAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470019.5
3UTR-3UTR CAA 90 bp ATCTGCCTGCCCACCATGGGGCATCTCTCCATGTGTAAACACTTCCCACATCAGTGCACAAAGCGGTTGTaGGACAGGTGCTCCATGCCC +
Preference number: 3 (lower is better)
Translates to: ICLPTMGHLSMCKHFPHQCTKRL*DRCSMP
Trigger: GGGCATGGAGCACCTGTCCAACAACCGCTTTGTGCA...CTGATGTGGGAAGTGTTTACACATGGAGAGATGCCCCATGGTGGGCAGGCAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
3UTR-3UTR CAA 90 bp ATCTGCCTGCCCACCATGGGGCATCTCTCCATGTGTAAACACTTCCCACATCAGCTGTTGTACACATCCTaGCTGAGGCCCAGGGCAGAC +
Preference number: 3 (lower is better)
Translates to: ICLPTMGHLSMCKHFPHQLLYTS*LRPRAD
Trigger: GTCTGCCCTGGGCCTCAGCAAGGATGTGTACAACAG...CTGATGTGGGAAGTGTTTACACATGGAGAGATGCCCCATGGTGGGCAGGCAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
3UTR GCA 72 bp AGCGTGGTGATGGGCTGCAGGCTAGACCGTGGGAAGTaGATCTTATCACTTGTGCTGTGGCGTTTGTTGGTG +
Preference number: 3 (lower is better)
Translates to: SVVMGCRLDRGK*ILSLVLWRLLV
Trigger: CACCAACAAACGCCACAGCACAAGTGATAAGATGCACTTCCCACGGTCTAGCCTGCAGCCCATCACCACGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
3UTR GCA 72 bp TCCCCAAACTCACTCTTCCCCAGCGTGGTGATGGGCTaGAGGCTAGACCGTGGGAAGTGCATCTTATCACTT +
Preference number: 3 (lower is better)
Translates to: SPNSLFPSVVMG*RLDRGKCILSL
Trigger: AAGTGATAAGATGCACTTCCCACGGTCTAGCCTGCAGCCCATCACCACGCTGGGGAAGAGTGAGTTTGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
3UTR CCA 72 bp AGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTaGGGAGGACTCACTTGCTGTGTCCTCTATAATCCT +
Preference number: 3 (lower is better)
Translates to: RRGSGSVCTSPE*GGLTCCVLYNP
Trigger: AGGATTATAGAGGACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
3UTR CCA 72 bp GGACCATTTTTCTGTGAGGGCTGTCACTATTTCCTCTaGAGCACCCACCCTAACCCCTGTGCCTGGCTCTCT +
Preference number: 3 (lower is better)
Translates to: GPFFCEGCHYFL*STHPNPCAWLS
Trigger: AGAGAGCCAGGCACAGGGGTTAGGGTGGGTGCTCCAGAGGAAATAGTGACAGCCCTCACAGAAAAATGGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471863.5
3UTR GCA 72 bp TCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTaGTGTGTCCTCTATAATCCTGGTCTAGACCCCCAA +
Preference number: 3 (lower is better)
Translates to: SVCTSPEWGGLT*CVLYNPGLDPQ
Trigger: TTGGGGGTCTAGACCAGGATTATAGAGGACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
3UTR CCA 72 bp GAGCATCTGGTTTCTGTACCAGACAACTGTAGGTTTTaGTGTGGCCTGGGTCAGGCAATCCAAGTAGCCGGG +
Preference number: 3 (lower is better)
Translates to: EHLVSVPDNCRF*CGLGQAIQVAG
Trigger: CCCGGCTACTTGGATTGCCTGACCCAGGCCACACCAAAACCTACAGTTGTCTGGTACAGAAACCAGATGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470019.5
3UTR CCA 72 bp CTTGTCAAACTCCATGCACTGCTGTGGCTGGGGTGGTaGTGTGAACTTGAGCTTTTCCAGCACTTGGACACG +
Preference number: 3 (lower is better)
Translates to: LVKLHALLWLGW*CELELFQHLDT
Trigger: CGTGTCCAAGTGCTGGAAAAGCTCAAGTTCACACCACCACCCCAGCCACAGCAGTGCATGGAGTTTGACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470019.5
3UTR-3UTR CAA 90 bp GAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCTTATGCACAAAGCGGTaGTTGGACAGGTGCTCCATG +
Preference number: 3 (lower is better)
Translates to: EDRDLAHHAVSFPLEMSSLCTKR*LDRCSM
Trigger: CATGGAGCACCTGTCCAACAACCGCTTTGTGCATAA...GGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
3UTR-3UTR CAA 90 bp CTTGAGAATATTAAGGAACTCCCCACAAACCCAGCTCATCCCAAGCCTAGCCCTCTGTTGTACACATCCTaGCTGAGGCCCAGGGCAGAC +
Preference number: 3 (lower is better)
Translates to: LENIKELPTNPAHPKPSPLLYTS*LRPRAD
Trigger: GTCTGCCCTGGGCCTCAGCAAGGATGTGTACAACAG...AGGGCTAGGCTTGGGATGAGCTGGGTTTGTGGGGAGTTCCTTAATATTCTCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
3UTR-3UTR CAA 90 bp GTGTGCCCAGAACTTGAGAATATTAAGGAACTCCCCACAAACCCAGCTCATCCCCCTCCCCAGGCAAAGTaGGCAGATGAGTGGCAGAGT +
Preference number: 3 (lower is better)
Translates to: VCPELENIKELPTNPAHPPPQAK*ADEWQS
Trigger: ACTCTGCCACTCATCTGCCAACTTTGCCTGGGGAGG...GGGATGAGCTGGGTTTGTGGGGAGTTCCTTAATATTCTCAAGTTCTGGGCACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
3UTR TCA 72 bp TGCTCTTTCCTCTGTACCCAGAGGACCATTTTTCTGTaGGGGCTGTCACTATTTCCTCTGGAGCACCCACCC +
Preference number: 3 (lower is better)
Translates to: CSFLCTQRTIFL*GLSLFPLEHPP
Trigger: GGGTGGGTGCTCCAGAGGAAATAGTGACAGCCCTCACAGAAAAATGGTCCTCTGGGTACAGAGGAAAGAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471863.5
3UTR TCA 72 bp CTACCTGGGTGCATAGGGCCACCTTCTGCTTGGTGCTaGGGGGCTGTGACTTCAATTTTTCATCCTTGCTCT +
Preference number: 3 (lower is better)
Translates to: LPGCIGPPSAWC*GAVTSIFHPCS
Trigger: AGAGCAAGGATGAAAAATTGAAGTCACAGCCCCTCAGCACCAAGCAGAAGGTGGCCCTATGCACCCAGGTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000470019.5
3UTR GCA 72 bp CCAGCCTGCAAATCTGCCAGTACTTCATCATCTGCCTaGCCACCATGGGGCATCTCTCCATGTGTAAACACT +
Preference number: 3 (lower is better)
Translates to: PACKSASTSSSA*PPWGISPCVNT
Trigger: AGTGTTTACACATGGAGAGATGCCCCATGGTGGGCAGGCAGATGATGAAGTACTGGCAGATTTGCAGGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
3UTR GCA 72 bp CTTCCCAGCCTGCAAATCTGCCAGTACTTCATCATCTaGCTGCCCACCATGGGGCATCTCTCCATGTGTAAA +
Preference number: 3 (lower is better)
Translates to: LPSLQICQYFII*LPTMGHLSMCK
Trigger: TTTACACATGGAGAGATGCCCCATGGTGGGCAGGCAGATGATGAAGTACTGGCAGATTTGCAGGCTGGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
3UTR-3UTR CAA 90 bp AAAGCCGCCCGTGGTGCATACAAAAAGGGCGGTTTATATAGTGTCAAAAGCTCCGTTGAAGGCCAGAAATaGGGGTTACCTGTGGCACCC +
Preference number: 3 (lower is better)
Translates to: KAARGAYKKGGLYSVKSSVEGQK*GLPVAP
Trigger: GGGTGCCACAGGTAACCCCAATTTCTGGCCTTCAAC...GGAGCTTTTGACACTATATAAACCGCCCTTTTTGTATGCACCACGGGCGGCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
3UTR CCA 72 bp AGGTGGGTGATTTGCTACCATCGTCACTCTGTGCATTaGGAGCATAGTGGGACCCAGGTCTCTAGATTCCTA +
Preference number: 3 (lower is better)
Translates to: RWVICYHRHSVH*EHSGTQVSRFL
Trigger: TAGGAATCTAGAGACCTGGGTCCCACTATGCTCCCAATGCACAGAGTGACGATGGTAGCAAATCACCCACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471863.5
3UTR CCA 72 bp AAATCTGCCAGTACTTCATCATCTGCCTGCCCACCATaGGGCATCTCTCCATGTGTAAACACTTCCCACATC +
Preference number: 3 (lower is better)
Translates to: KSASTSSSACPP*GISPCVNTSHI
Trigger: GATGTGGGAAGTGTTTACACATGGAGAGATGCCCCATGGTGGGCAGGCAGATGATGAAGTACTGGCAGATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
3UTR CCA 72 bp AAGACCTCGAACCGTGAGTCCTCTGAGATGAGCATCTaGTTTCTGTACCAGACAACTGTAGGTTTTGGTGTG +
Preference number: 3 (lower is better)
Translates to: KTSNRESSEMSI*FLYQTTVGFGV
Trigger: CACACCAAAACCTACAGTTGTCTGGTACAGAAACCAGATGCTCATCTCAGAGGACTCACGGTTCGAGGTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR TCA 90 bp CCCTGCCCAGGCCATCCTGAGCGGGCTCCCTCCTCACGGCTTGCTGTCCACGGTCTCAGGAAAAGGAGCTaGGGGCGCACGGCGGGCGCG +
Preference number: 4 (lower is better)
Translates to: PCPGHPERAPSSRLAVHGLRKRS*GRTAGA
Trigger: CGCGCCCGCCGTGCGCCCTCAGCTCCTTTTCCTGAG...ACCGTGGACAGCAAGCCGTGAGGAGGGAGCCCGCTCAGGATGGCCTGGGCAGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR TCA 90 bp TCCCCTGCCCAGGCCATCCTGAGCGGGCTCCCTCCTCACGGCTTGCTGTCCACGGCAGCAGCAGGACGCTaGGCAGAGGCAACCGGCGGG +
Preference number: 4 (lower is better)
Translates to: SPAQAILSGLPPHGLLSTAAAGR*AEATGG
Trigger: CCCGCCGGTTGCCTCTGCTCAGCGTCCTGCTGCTGC...CGTGGACAGCAAGCCGTGAGGAGGGAGCCCGCTCAGGATGGCCTGGGCAGGGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR TCA 90 bp GCCCAGGCCATCCTGAGCGGGCTCCCTCCTCACGGCTTGCTGTCCACGGTGCTGGCAGCAGCAGGACGCTaGGCAGAGGCAACCGGCGGG +
Preference number: 4 (lower is better)
Translates to: AQAILSGLPPHGLLSTVLAAAGR*AEATGG
Trigger: CCCGCCGGTTGCCTCTGCTCAGCGTCCTGCTGCTGC...CAGCACCGTGGACAGCAAGCCGTGAGGAGGGAGCCCGCTCAGGATGGCCTGGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR TCA 90 bp ACCCTCCAGGATGGCCTCGGGGGACATCCAGCGCAGCGGCACCCAGGCCTGGCGGGGCAGCCCTCGGGCTaGGGAAGTCTAGCCTTCCCA +
Preference number: 4 (lower is better)
Translates to: TLQDGLGGHPAQRHPGLAGQPSG*GSLAFP
Trigger: TGGGAAGGCTAGACTTCCTCAGCCCGAGGGCTGCCC...CGCCAGGCCTGGGTGCCGCTGCGCTGGATGTCCCCCGAGGCCATCCTGGAGGGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
CDS-3UTR CCA 90 bp CCCTGCCCAGGCCATCCTGAGCGGGCTCCCTCCTCACGGCTTGCTGTCCACGGTCGCCGCTCCGTGTCCTaGACAGGGGCCCCATCGAGC +
Preference number: 4 (lower is better)
Translates to: PCPGHPERAPSSRLAVHGRRSVS*TGAPSS
Trigger: GCTCGATGGGGCCCCTGTCCAGGACACGGAGCGGCG...ACCGTGGACAGCAAGCCGTGAGGAGGGAGCCCGCTCAGGATGGCCTGGGCAGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR TCA 90 bp CTGCCTGGTCCCTGGCAGGTCAAGTCTGACACTTGGCCAAGGGCTCGGCCGCCCGCAGCAGCAGGACGCTaGGCAGAGGCAACCGGCGGG +
Preference number: 4 (lower is better)
Translates to: LPGPWQVKSDTWPRARPPAAAGR*AEATGG
Trigger: CCCGCCGGTTGCCTCTGCTCAGCGTCCTGCTGCTGC...GGGCGGCCGAGCCCTTGGCCAAGTGTCAGACTTGACCTGCCAGGGACCAGGCAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476760.1
CDS-3UTR TCA 90 bp TCCCCTGCCCAGGCCATCCTGAGCGGGCTCCCTCCTCACGGCTTGCTGTCCACGGGCCCAGCACGGCAATaGTGTAGGCCACAGCGGCAC +
Preference number: 4 (lower is better)
Translates to: SPAQAILSGLPPHGLLSTGPARQ*CRPQRH
Trigger: GTGCCGCTGTGGCCTACATCATTGCCGTGCTGGGCC...CGTGGACAGCAAGCCGTGAGGAGGGAGCCCGCTCAGGATGGCCTGGGCAGGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR GCA 90 bp TCCAGGATGGCCTCGGGGGACATCCAGCGCAGCGGCACCCAGGCCTGGCGGAAGCCTTCTGGTAGACCCTaGCATGGGTGGGCAGCCGGA +
Preference number: 4 (lower is better)
Translates to: SRMASGDIQRSGTQAWRKPSGRP*HGWAAG
Trigger: TCCGGCTGCCCACCCATGGCAGGGTCTACCAGAAGG...CTTCCGCCAGGCCTGGGTGCCGCTGCGCTGGATGTCCCCCGAGGCCATCCTGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR GCA 90 bp ACCCTCCAGGATGGCCTCGGGGGACATCCAGCGCAGCGGCACCCAGGCCTGGCGCCAGGGCTACCTGGGTaGATAGGGCCACCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: TLQDGLGGHPAQRHPGLAPGLPG*IGPPSA
Trigger: AGCAGAAGGTGGCCCTATGCACCCAGGTAGCCCTGG...CGCCAGGCCTGGGTGCCGCTGCGCTGGATGTCCCCCGAGGCCATCCTGGAGGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
CDS-3UTR CCA 90 bp GCCTGCCTGGTCCCTGGCAGGTCAAGTCTGACACTTGGCCAAGGGCTCGGCCGCCTCAGGCTGCTGCCCTaGGCGAAACGCCGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: ACLVPGRSSLTLGQGLGRLRLLP*AKRRSV
Trigger: CACGGAGCGGCGTTTCGCCCAGGGCAGCAGCCTGAG...GCGGCCGAGCCCTTGGCCAAGTGTCAGACTTGACCTGCCAGGGACCAGGCAGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476760.1
CDS-3UTR TCA 90 bp AGGCCCTGCTCAGACCTCAGCAATGCCTGTTGCACTAGGGCAGGGGCCTCAGGGGCAGCAGCAGGACGCTaGGCAGAGGCAACCGGCGGG +
Preference number: 4 (lower is better)
Translates to: RPCSDLSNACCTRAGASGAAAGR*AEATGG
Trigger: CCCGCCGGTTGCCTCTGCTCAGCGTCCTGCTGCTGC...CCCTGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAGGTCTGAGCAGGGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR TCA 90 bp TGCTCAGACCTCAGCAATGCCTGTTGCACTAGGGCAGGGGCCTCAGGGCCCAGGGCAGCAGCAGGACGCTaGGCAGAGGCAACCGGCGGG +
Preference number: 4 (lower is better)
Translates to: CSDLSNACCTRAGASGPRAAAGR*AEATGG
Trigger: CCCGCCGGTTGCCTCTGCTCAGCGTCCTGCTGCTGC...CCTGGGCCCTGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAGGTCTGAGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR TCA 90 bp GGGCTGCCAGGGCCCTCCGACTCCTCCGGCACAGGCTTGTCGACCGTTGGATGTGGCCCAGCACGGCAATaGTGTAGGCCACAGCGGCAC +
Preference number: 4 (lower is better)
Translates to: GLPGPSDSSGTGLSTVGCGPARQ*CRPQRH
Trigger: GTGCCGCTGTGGCCTACATCATTGCCGTGCTGGGCC...ACATCCAACGGTCGACAAGCCTGTGCCGGAGGAGTCGGAGGGCCCTGGCAGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461100.5
CDS-3UTR TCA 90 bp GACACGGGCTTGCGCCTCGATGCTGCCGGCTGGGGTGCTGCTCATACAACGGTACTGCCCAGGCCATCCTaGGCGGGCTCCCTCCTCACG +
Preference number: 4 (lower is better)
Translates to: DTGLRLDAAGWGAAHTTVLPRPS*AGSLLT
Trigger: CGTGAGGAGGGAGCCCGCTCAGGATGGCCTGGGCAG...TACCGTTGTATGAGCAGCACCCCAGCCGGCAGCATCGAGGCGCAAGCCCGTGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR TCA 90 bp GCTGTGGCGTTTGTTGGTGGCCGCGGGGCCGGAGCCCAAGCTGGTCAAGGCCACCCCTCCTCCAAGCCCTaGGCCTTTGCCAGGAACACC +
Preference number: 4 (lower is better)
Translates to: AVAFVGGRGAGAQAGQGHPSSKP*AFARNT
Trigger: GGTGTTCCTGGCAAAGGCTCAGGGCTTGGAGGAGGG...GTGGCCTTGACCAGCTTGGGCTCCGGCCCCGCGGCCACCAACAAACGCCACAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
CDS-3UTR GCA 90 bp CCTGCTCAGACCTCAGCAATGCCTGTTGCACTAGGGCAGGGGCCTCAGGGCCCACCGGCGCCCCTGCAGTaGATCCTGGGAGGACGGCTG +
Preference number: 4 (lower is better)
Translates to: PAQTSAMPVALGQGPQGPPAPLQ*ILGGRL
Trigger: CAGCCGTCCTCCCAGGATGCACTGCAGGGGCGCCGG...TGGGCCCTGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAGGTCTGAGCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp TGCTCAGACCTCAGCAATGCCTGTTGCACTAGGGCAGGGGCCTCAGGGCCCAGGCCGGCGCCCCTGCAGTaGATCCTGGGAGGACGGCTG +
Preference number: 4 (lower is better)
Translates to: CSDLSNACCTRAGASGPRPAPLQ*ILGGRL
Trigger: CAGCCGTCCTCCCAGGATGCACTGCAGGGGCGCCGG...CCTGGGCCCTGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAGGTCTGAGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp ACGGTGCTGTCTCCCAGGGCGCTGGCAATCTCACTGAAGGAGGGCCGGTCCTTGAGCCGGACTCCCGCGTaGTCCCACCACACGCTGGGC +
Preference number: 4 (lower is better)
Translates to: TVLSPRALAISLKEGRSLSRTPA*SHHTLG
Trigger: GCCCAGCGTGTGGTGGGAGCACGCGGGAGTCCGGCT...CAAGGACCGGCCCTCCTTCAGTGAGATTGCCAGCGCCCTGGGAGACAGCACCGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR GCA 90 bp GCTGTGGCGTTTGTTGGTGGCCGCGGGGCCGGAGCCCAAGCTGGTCAAGGCCACGAGGGCTGCCCGTTCTaGAAAGGCCCACCGTTGAGG +
Preference number: 4 (lower is better)
Translates to: AVAFVGGRGAGAQAGQGHEGCPF*KGPPLR
Trigger: CCTCAACGGTGGGCCTTTGCAGAACGGGCAGCCCTC...GTGGCCTTGACCAGCTTGGGCTCCGGCCCCGCGGCCACCAACAAACGCCACAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
CDS-3UTR CCA 90 bp TCCAGGATGGCCTCGGGGGACATCCAGCGCAGCGGCACCCAGGCCTGGCGGAAGATGCCCAGGGCTACCTaGGTGCATAGGGCCACCTTC +
Preference number: 4 (lower is better)
Translates to: SRMASGDIQRSGTQAWRKMPRAT*VHRATF
Trigger: GAAGGTGGCCCTATGCACCCAGGTAGCCCTGGGCAT...CTTCCGCCAGGCCTGGGTGCCGCTGCGCTGGATGTCCCCCGAGGCCATCCTGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
CDS-3UTR TCA 90 bp GGCCCACCGTTGAGGCATTCCATCTCTGGCTCCTCGCCCTCGGGCTGCTTCTGCGGCCCAGCACGGCAATaGTGTAGGCCACAGCGGCAC +
Preference number: 4 (lower is better)
Translates to: GPPLRHSISGSSPSGCFCGPARQ*CRPQRH
Trigger: GTGCCGCTGTGGCCTACATCATTGCCGTGCTGGGCC...GCAGAAGCAGCCCGAGGGCGAGGAGCCAGAGATGGAATGCCTCAACGGTGGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
CDS-3UTR TCA 90 bp TCCCCTGCCCAGGCCATCCTGAGCGGGCTCCCTCCTCACGGCTTGCTGTCCACGCGTCACGATGAGACCTaGCACTCTGGCCACCATGGG +
Preference number: 4 (lower is better)
Translates to: SPAQAILSGLPPHGLLSTRHDET*HSGHHG
Trigger: CCCATGGTGGCCAGAGTGTCAGGTCTCATCGTGACG...CGTGGACAGCAAGCCGTGAGGAGGGAGCCCGCTCAGGATGGCCTGGGCAGGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461389.1
CDS-3UTR GCA 90 bp GCCTGCCTGGTCCCTGGCAGGTCAAGTCTGACACTTGGCCAAGGGCTCGGCCGCCTGCAAAGCTCAGGCTaGTGCCCTGGGCGAAACGCC +
Preference number: 4 (lower is better)
Translates to: ACLVPGRSSLTLGQGLGRLQSSG*CPGRNA
Trigger: GGCGTTTCGCCCAGGGCAGCAGCCTGAGCTTTGCAG...GCGGCCGAGCCCTTGGCCAAGTGTCAGACTTGACCTGCCAGGGACCAGGCAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476760.1
CDS-3UTR GCA 90 bp GTGGGGAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTAGCCGGACTCCCGCGTaGTCCCACCACACGCTGGGC +
Preference number: 4 (lower is better)
Translates to: VGKTWVWVSVHKPRVGRTSRTPA*SHHTLG
Trigger: GCCCAGCGTGTGGTGGGAGCACGCGGGAGTCCGGCT...AGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTCCCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp TCCAGGATGGCCTCGGGGGACATCCAGCGCAGCGGCACCCAGGCCTGGCGGAAGGTCACCCGGGCAAAATaGAGGGTCCCAGCGTTGTCT +
Preference number: 4 (lower is better)
Translates to: SRMASGDIQRSGTQAWRKVTRAK*RVPALS
Trigger: AGACAACGCTGGGACCCTGCATTTTGCCCGGGTGAC...CTTCCGCCAGGCCTGGGTGCCGCTGCGCTGGATGTCCCCCGAGGCCATCCTGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR GCA 90 bp TGCTGTGGCGTTTGTTGGTGGCCGCGGGGCCGGAGCCCAAGCTGGTCAAGGCCAGCACGAATCTGGCCCTaGGGCCCGTTGGAGGCAATG +
Preference number: 4 (lower is better)
Translates to: CCGVCWWPRGRSPSWSRPARIWP*GPLEAM
Trigger: CATTGCCTCCAACGGGCCGCAGGGCCAGATTCGTGC...TGGCCTTGACCAGCTTGGGCTCCGGCCCCGCGGCCACCAACAAACGCCACAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR GCA 90 bp CCTCGGGGGACATCCAGCGCAGCGGCACCCAGGCCTGGCGGAAGTGGTAGTACTCCCTCGGGCTGCTTCTaGAGCCGCTTGGCTTTGCAG +
Preference number: 4 (lower is better)
Translates to: PRGTSSAAAPRPGGSGSTPSGCF*SRLALQ
Trigger: CTGCAAAGCCAAGCGGCTGCAGAAGCAGCCCGAGGG...AGTACTACCACTTCCGCCAGGCCTGGGTGCCGCTGCGCTGGATGTCCCCCGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR GCA 90 bp GCGTTTGTTGGTGGCCGCGGGGCCGGAGCCCAAGCTGGTCAAGGCCACTTCTTCTCCTCGCCCTCGGGCTaGTTCTGCAGCCGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: AFVGGRGAGAQAGQGHFFSSPSG*FCSRLA
Trigger: AGCCAAGCGGCTGCAGAAGCAGCCCGAGGGCGAGGA...GAAGAAGTGGCCTTGACCAGCTTGGGCTCCGGCCCCGCGGCCACCAACAAACGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
CDS-3UTR GCA 90 bp CCCTGCCCAGGCCATCCTGAGCGGGCTCCCTCCTCACGGCTTGCTGTCCACGGTTCCCTCCTCACGGCTTaGTGTCCACGGTGCTGTCTC +
Preference number: 4 (lower is better)
Translates to: PCPGHPERAPSSRLAVHGSLLTA*CPRCCL
Trigger: GAGACAGCACCGTGGACAGCAAGCCGTGAGGAGGGA...ACCGTGGACAGCAAGCCGTGAGGAGGGAGCCCGCTCAGGATGGCCTGGGCAGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
CDS-3UTR CCA 90 bp TGCTCAGACCTCAGCAATGCCTGTTGCACTAGGGCAGGGGCCTCAGGGCCCAGGCTCAGGCTGCTGCCCTaGGCGAAACGCCGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: CSDLSNACCTRAGASGPRLRLLP*AKRRSV
Trigger: CACGGAGCGGCGTTTCGCCCAGGGCAGCAGCCTGAG...CCTGGGCCCTGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAGGTCTGAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp AGGCCCTGCTCAGACCTCAGCAATGCCTGTTGCACTAGGGCAGGGGCCTCAGGGCTCAGGCTGCTGCCCTaGGCGAAACGCCGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: RPCSDLSNACCTRAGASGLRLLP*AKRRSV
Trigger: CACGGAGCGGCGTTTCGCCCAGGGCAGCAGCCTGAG...CCCTGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAGGTCTGAGCAGGGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp AGAGAAGTCACCCTCCAGGATGGCCTCGGGGGACATCCAGCGCAGCGGCACCCAGGCTCTGCGGAGGTGTaGGGGGCGACTGCGGTTAGT +
Preference number: 4 (lower is better)
Translates to: REVTLQDGLGGHPAQRHPGSAEV*GATAVS
Trigger: ACTAACCGCAGTCGCCCCCCACACCTCCGCAGAGCC...TGGGTGCCGCTGCGCTGGATGTCCCCCGAGGCCATCCTGGAGGGTGACTTCTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR CCA 90 bp GCCCAGGCCATCCTGAGCGGGCTCCCTCCTCACGGCTTGCTGTCCACGGTGCTGCGTTGGCAAACACTGTaGCTCTGCGGAGGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: AQAILSGLPPHGLLSTVLRWQTL*LCGGVG
Trigger: CCCCACACCTCCGCAGAGCCACAGTGTTTGCCAACG...CAGCACCGTGGACAGCAAGCCGTGAGGAGGGAGCCCGCTCAGGATGGCCTGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR CCA 90 bp TCCAGGATGGCCTCGGGGGACATCCAGCGCAGCGGCACCCAGGCCTGGCGGAAGGCAGCAGAGACCCGTTaGCAAACACTGTGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: SRMASGDIQRSGTQAWRKAAETR*QTLWLC
Trigger: GCAGAGCCACAGTGTTTGCCAACGGGTCTCTGCTGC...CTTCCGCCAGGCCTGGGTGCCGCTGCGCTGGATGTCCCCCGAGGCCATCCTGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR CCA 90 bp AGAGAAGTCACCCTCCAGGATGGCCTCGGGGGACATCCAGCGCAGCGGCACCCATTGCGTGGCCGGACCTaGGTCAGCAGCAGAGACCCG +
Preference number: 4 (lower is better)
Translates to: REVTLQDGLGGHPAQRHPLRGRT*VSSRDP
Trigger: CGGGTCTCTGCTGCTGACCCAGGTCCGGCCACGCAA...TGGGTGCCGCTGCGCTGGATGTCCCCCGAGGCCATCCTGGAGGGTGACTTCTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR CCA 90 bp ACCCTCCAGGATGGCCTCGGGGGACATCCAGCGCAGCGGCACCCAGGCCTGGCGCTGCTGTGGCTGGGGTaGTGGTGTGAACTTGAGCTT +
Preference number: 4 (lower is better)
Translates to: TLQDGLGGHPAQRHPGLALLWLG*WCELEL
Trigger: AAGCTCAAGTTCACACCACCACCCCAGCCACAGCAG...CGCCAGGCCTGGGTGCCGCTGCGCTGGATGTCCCCCGAGGCCATCCTGGAGGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR CCA 90 bp ACCCTCCAGGATGGCCTCGGGGGACATCCAGCGCAGCGGCACCCAGGCCTGGCGCTGAACAGGGCACCGTaGCCTCCTTGTCAAACTCCA +
Preference number: 4 (lower is better)
Translates to: TLQDGLGGHPAQRHPGLALNRAP*PPCQTP
Trigger: TGGAGTTTGACAAGGAGGCCACGGTGCCCTGTTCAG...CGCCAGGCCTGGGTGCCGCTGCGCTGGATGTCCCCCGAGGCCATCCTGGAGGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR CCA 90 bp GCCGCGGGGCCGGAGCCCAAGCTGGTCAAGGCCACTTCTTCTTGGATCTCTGCTTGTGGCGTTTGTTGGTaGCCGCGGGGCCGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: AAGPEPKLVKATSSWISACGVCW*PRGRSP
Trigger: TGGGCTCCGGCCCCGCGGCCACCAACAAACGCCACA...AGCAGAGATCCAAGAAGAAGTGGCCTTGACCAGCTTGGGCTCCGGCCCCGCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
CDS-3UTR CCA 90 bp TATCACTTGTGCTGTGGCGTTTGTTGGTGGCCGCGGGGCCGGAGCCCAAGCTGGTGCTGTGGCGTTTGTTaGTGGCCGCGGGGCCGGAGC +
Preference number: 4 (lower is better)
Translates to: YHLCCGVCWWPRGRSPSWCCGVC*WPRGRS
Trigger: GCTCCGGCCCCGCGGCCACCAACAAACGCCACAGCA...CCAGCTTGGGCTCCGGCCCCGCGGCCACCAACAAACGCCACAGCACAAGTGATA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
CDS-3UTR TCA 90 bp CCTGCTCAGACCTCAGCAATGCCTGTTGCACTAGGGCAGGGGCCTCAGGGCCCAGTGTGGCTTCCAGGATaGTGGGTGGGCCCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: PAQTSAMPVALGQGPQGPVWLPG*WVGPSA
Trigger: GGCAGAGGGGCCCACCCATCATCCTGGAAGCCACAC...TGGGCCCTGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAGGTCTGAGCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR TCA 90 bp CCTGCTCAGACCTCAGCAATGCCTGTTGCACTAGGGCAGGGGCCTCAGGGCCCAACATCCTGTCTCCGCTaGCCAGCCAGGTTGGCCGCG +
Preference number: 4 (lower is better)
Translates to: PAQTSAMPVALGQGPQGPTSCLR*PARLAA
Trigger: CGCGGCCAACCTGGCTGGTCAGCGGAGACAGGATGT...TGGGCCCTGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAGGTCTGAGCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR TCA 90 bp CCTGCTCAGACCTCAGCAATGCCTGTTGCACTAGGGCAGGGGCCTCAGGGCCCAGGCCCAGCACGGCAATaGTGTAGGCCACAGCGGCAC +
Preference number: 4 (lower is better)
Translates to: PAQTSAMPVALGQGPQGPGPARQ*CRPQRH
Trigger: GTGCCGCTGTGGCCTACATCATTGCCGTGCTGGGCC...TGGGCCCTGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAGGTCTGAGCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR TCA 90 bp AGGCCCTGCTCAGACCTCAGCAATGCCTGTTGCACTAGGGCAGGGGCCTCAGGGGGGCAGCCCTCGGGCTaGGGAAGTCTAGCCTTCCCA +
Preference number: 4 (lower is better)
Translates to: RPCSDLSNACCTRAGASGGQPSG*GSLAFP
Trigger: TGGGAAGGCTAGACTTCCTCAGCCCGAGGGCTGCCC...CCCTGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAGGTCTGAGCAGGGCCT
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000489707.5
CDS-3UTR TCA 90 bp GAGGTGGCAGGGAAAACTGCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCCTGCCCAGGCCATCCTaGGCGGGCTCCCTCCTCACG +
Preference number: 4 (lower is better)
Translates to: EVAGKTAQLKALVAQFGSLPRPS*AGSLLT
Trigger: CGTGAGGAGGGAGCCCGCTCAGGATGGCCTGGGCAG...GGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCCACCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR TCA 90 bp GCCCAGGCCATCCTGAGCGGGCTCCCTCCTCACGGCTTGCTGTCCACGGTGCTGGGCAAAGTTGGCAGATaGGTGGCAGAGTTGGACCCG +
Preference number: 4 (lower is better)
Translates to: AQAILSGLPPHGLLSTVLGKVGR*VAELDP
Trigger: CGGGTCCAACTCTGCCACTCATCTGCCAACTTTGCC...CAGCACCGTGGACAGCAAGCCGTGAGGAGGGAGCCCGCTCAGGATGGCCTGGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR TCA 90 bp AGAGAAGTCACCCTCCAGGATGGCCTCGGGGGACATCCAGCGCAGCGGCACCCACCCTCCTCCAAGCCCTaGGCCTTTGCCAGGAACACC +
Preference number: 4 (lower is better)
Translates to: REVTLQDGLGGHPAQRHPPSSKP*AFARNT
Trigger: GGTGTTCCTGGCAAAGGCTCAGGGCTTGGAGGAGGG...TGGGTGCCGCTGCGCTGGATGTCCCCCGAGGCCATCCTGGAGGGTGACTTCTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR TCA 90 bp GGCCCACCGTTGAGGCATTCCATCTCTGGCTCCTCGCCCTCGGGCTGCTTCTGCCCCTCCTCCAAGCCCTaGGCCTTTGCCAGGAACACC +
Preference number: 4 (lower is better)
Translates to: GPPLRHSISGSSPSGCFCPSSKP*AFARNT
Trigger: GGTGTTCCTGGCAAAGGCTCAGGGCTTGGAGGAGGG...GCAGAAGCAGCCCGAGGGCGAGGAGCCAGAGATGGAATGCCTCAACGGTGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
CDS-3UTR GCA 90 bp AGCCTAGCCCTCCCCAGGCAAAGTTGGCAGATGAGTGGCAGAGTTGGACCCGGTCCGGCGCCCCTGCAGTaGATCCTGGGAGGACGGCTG +
Preference number: 4 (lower is better)
Translates to: SLALPRQSWQMSGRVGPGPAPLQ*ILGGRL
Trigger: CAGCCGTCCTCCCAGGATGCACTGCAGGGGCGCCGG...ACCGGGTCCAACTCTGCCACTCATCTGCCAACTTTGCCTGGGGAGGGCTAGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp ACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGCCGGCGCCCCTGCAGTaGATCCTGGGAGGACGGCTG +
Preference number: 4 (lower is better)
Translates to: TWVWVSVHKPRVGRTHLLPAPLQ*ILGGRL
Trigger: CAGCCGTCCTCCCAGGATGCACTGCAGGGGCGCCGG...CAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp GCCTGCCTGGTCCCTGGCAGGTCAAGTCTGACACTTGGCCAAGGGCTCGGCCGCCCACACACTGGAAGGTaGCAGAGTCCTGCAGCCGGT +
Preference number: 4 (lower is better)
Translates to: ACLVPGRSSLTLGQGLGRPHTGR*QSPAAG
Trigger: ACCGGCTGCAGGACTCTGGCACCTTCCAGTGTGTGG...GCGGCCGAGCCCTTGGCCAAGTGTCAGACTTGACCTGCCAGGGACCAGGCAGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476760.1
CDS-3UTR GCA 90 bp ACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGAGCCGGACTCCCGCGTaGTCCCACCACACGCTGGGC +
Preference number: 4 (lower is better)
Translates to: TWVWVSVHKPRVGRTHLLSRTPA*SHHTLG
Trigger: GCCCAGCGTGTGGTGGGAGCACGCGGGAGTCCGGCT...CAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp TCCCCTGCCCAGGCCATCCTGAGCGGGCTCCCTCCTCACGGCTTGCTGTCCACGTGCCGGCTGGGGTGCTaGTCATACAACGGTACCATG +
Preference number: 4 (lower is better)
Translates to: SPAQAILSGLPPHGLLSTCRLGC*SYNGTM
Trigger: CATGGTACCGTTGTATGAGCAGCACCCCAGCCGGCA...CGTGGACAGCAAGCCGTGAGGAGGGAGCCCGCTCAGGATGGCCTGGGCAGGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR GCA 90 bp TGCTCAGACCTCAGCAATGCCTGTTGCACTAGGGCAGGGGCCTCAGGGCCCAGGCTTGCGCCTCGATGCTaGCGGCTGGGGTGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: CSDLSNACCTRAGASGPRLAPRC*RLGCCS
Trigger: TGAGCAGCACCCCAGCCGGCAGCATCGAGGCGCAAG...CCTGGGCCCTGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAGGTCTGAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp GAGGTGGCAGGGAAAACTGCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCGGGCTTGCGCCTCGATaGTGCCGGCTGGGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: EVAGKTAQLKALVAQFGSGLAPR*CRLGCC
Trigger: GCAGCACCCCAGCCGGCAGCATCGAGGCGCAAGCCC...GGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCCACCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp GGAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTGGGCTTGCGCCTCGATaGTGCCGGCTGGGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: GRRGSGSVCTSPEWGGLTGLAPR*CRLGCC
Trigger: GCAGCACCCCAGCCGGCAGCATCGAGGCGCAAGCCC...AGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp GCCCAGGCCATCCTGAGCGGGCTCCCTCCTCACGGCTTGCTGTCCACGGTGCTGCATAGGGCCACCTTCTaGTTGGTGCTGAGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: AQAILSGLPPHGLLSTVLHRATF*LVLRGC
Trigger: ACAGCCCCTCAGCACCAAGCAGAAGGTGGCCCTATG...CAGCACCGTGGACAGCAAGCCGTGAGGAGGGAGCCCGCTCAGGATGGCCTGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
CDS-3UTR GCA 90 bp CACTTGTGCTGTGGCGTTTGTTGGTGGCCGCGGGGCCGGAGCCCAAGCTGGTCATGGACAGGTGCTCCATaGCCAGGGCTACCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: HLCCGVCWWPRGRSPSWSWTGAP*PGLPGC
Trigger: GCACCCAGGTAGCCCTGGGCATGGAGCACCTGTCCA...TGACCAGCTTGGGCTCCGGCCCCGCGGCCACCAACAAACGCCACAGCACAAGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR GCA 90 bp GCCATCCTGAGCGGGCTCCCTCCTCACGGCTTGCTGTCCACGGTGCTGTCTCCCGGAAAGGCCAGGCCCTaGTCAGACCTCAGCAATGCC +
Preference number: 4 (lower is better)
Translates to: AILSGLPPHGLLSTVLSPGKARP*SDLSNA
Trigger: GGCATTGCTGAGGTCTGAGCAGGGCCTGGCCTTTCC...GGGAGACAGCACCGTGGACAGCAAGCCGTGAGGAGGGAGCCCGCTCAGGATGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
CDS-3UTR CCA 90 bp GGAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTCGCCGCTCCGTGTCCTaGACAGGGGCCCCATCGAGC +
Preference number: 4 (lower is better)
Translates to: GRRGSGSVCTSPEWGGLTRRSVS*TGAPSS
Trigger: GCTCGATGGGGCCCCTGTCCAGGACACGGAGCGGCG...AGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp GTGGGGAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCTCAGGCTGCTGCCCTaGGCGAAACGCCGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: VGKTWVWVSVHKPRVGRTLRLLP*AKRRSV
Trigger: CACGGAGCGGCGTTTCGCCCAGGGCAGCAGCCTGAG...AGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTCCCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp CACTTGTGCTGTGGCGTTTGTTGGTGGCCGCGGGGCCGGAGCCCAAGCTGGTCAGCTACTACCACGTCCTaGGGTGCCAGCACCACCCTG +
Preference number: 4 (lower is better)
Translates to: HLCCGVCWWPRGRSPSWSATTTS*GASTTL
Trigger: CAGGGTGGTGCTGGCACCCCAGGACGTGGTAGTAGC...TGACCAGCTTGGGCTCCGGCCCCGCGGCCACCAACAAACGCCACAGCACAAGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR CCA 90 bp GGCCCACCGTTGAGGCATTCCATCTCTGGCTCCTCGCCCTCGGGCTGCTTCTGCGATCCCTGCATTGCGTaGCCGGACCTGGGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: GPPLRHSISGSSPSGCFCDPCIA*PDLGQQ
Trigger: CTGCTGACCCAGGTCCGGCCACGCAATGCAGGGATC...GCAGAAGCAGCCCGAGGGCGAGGAGCCAGAGATGGAATGCCTCAACGGTGGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR CCA 90 bp AGGCCCTGCTCAGACCTCAGCAATGCCTGTTGCACTAGGGCAGGGGCCTCAGGGGCTCCCACCACACGCTaGGCTCTGGCAGACCCTTGG +
Preference number: 4 (lower is better)
Translates to: RPCSDLSNACCTRAGASGAPTTR*ALADPW
Trigger: CCAAGGGTCTGCCAGAGCCCAGCGTGTGGTGGGAGC...CCCTGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAGGTCTGAGCAGGGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp CGTTTGTTGGTGGCCGCGGGGCCGGAGCCCAAGCTGGTCAAGGCCACTTCTTCTGCTCCCACCACACGCTaGGCTCTGGCAGACCCTTGG +
Preference number: 4 (lower is better)
Translates to: RLLVAAGPEPKLVKATSSAPTTR*ALADPW
Trigger: CCAAGGGTCTGCCAGAGCCCAGCGTGTGGTGGGAGC...AGAAGAAGTGGCCTTGACCAGCTTGGGCTCCGGCCCCGCGGCCACCAACAAACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR CCA 90 bp CCCTGCCCAGGCCATCCTGAGCGGGCTCCCTCCTCACGGCTTGCTGTCCACGGTAGCTTTTCCAGCACTTaGACACGGGCTTGCGCCTCG +
Preference number: 4 (lower is better)
Translates to: PCPGHPERAPSSRLAVHGSFSST*TRACAS
Trigger: CGAGGCGCAAGCCCGTGTCCAAGTGCTGGAAAAGCT...ACCGTGGACAGCAAGCCGTGAGGAGGGAGCCCGCTCAGGATGGCCTGGGCAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR CCA 90 bp TCCAGGATGGCCTCGGGGGACATCCAGCGCAGCGGCACCCAGGCCTGGCGGAAGCTGAACAGGGCACCGTaGCCTCCTTGTCAAACTCCA +
Preference number: 4 (lower is better)
Translates to: SRMASGDIQRSGTQAWRKLNRAP*PPCQTP
Trigger: TGGAGTTTGACAAGGAGGCCACGGTGCCCTGTTCAG...CTTCCGCCAGGCCTGGGTGCCGCTGCGCTGGATGTCCCCCGAGGCCATCCTGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR CCA 90 bp GTTCTGCAAAGGCCCACCGTTGAGGCATTCCATCTCTGGCTCCTCGCCCTCGGGGGCTTGGGGTCCCCCTaGGCCTCGCACTGCAGTAGG +
Preference number: 4 (lower is better)
Translates to: VLQRPTVEAFHLWLLALGGLGSP*ASHCSR
Trigger: CCTACTGCAGTGCGAGGCCCAGGGGGACCCCAAGCC...CCCGAGGGCGAGGAGCCAGAGATGGAATGCCTCAACGGTGGGCCTTTGCAGAAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR CCA 90 bp AGAGAAGTCACCCTCCAGGATGGCCTCGGGGGACATCCAGCGCAGCGGCACCCATCCTGGGTCCCAGCTTaGTGGGGTCCAGGATGCGGT +
Preference number: 4 (lower is better)
Translates to: REVTLQDGLGGHPAQRHPSWVPA*WGPGCG
Trigger: ACCGCATCCTGGACCCCACCAAGCTGGGACCCAGGA...TGGGTGCCGCTGCGCTGGATGTCCCCCGAGGCCATCCTGGAGGGTGACTTCTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR CCA 90 bp GCCAGGAACACCTCCCCAAACTCACTCTTCCCCAGCGTGGTGATGGGCTGCAGGTGTGGCGTTTGTTGGTaGCCGCGGGGCCGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: ARNTSPNSLFPSVVMGCRCGVCW*PRGRSP
Trigger: TGGGCTCCGGCCCCGCGGCCACCAACAAACGCCACA...CCTGCAGCCCATCACCACGCTGGGGAAGAGTGAGTTTGGGGAGGTGTTCCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
CDS-3UTR CCA 90 bp TCCCCAAACTCACTCTTCCCCAGCGTGGTGATGGGCTGCAGGCTAGACCGTGGGTGTGGCGTTTGTTGGTaGCCGCGGGGCCGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: SPNSLFPSVVMGCRLDRGCGVCW*PRGRSP
Trigger: TGGGCTCCGGCCCCGCGGCCACCAACAAACGCCACA...CCCACGGTCTAGCCTGCAGCCCATCACCACGCTGGGGAAGAGTGAGTTTGGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
CDS-3UTR CCA 90 bp TCTTATCACTTGTGCTGTGGCGTTTGTTGGTGGCCGCGGGGCCGGAGCCCAAGCTGCTGTGGCGTTTGTTaGTGGCCGCGGGGCCGGAGC +
Preference number: 4 (lower is better)
Translates to: SYHLCCGVCWWPRGRSPSCCGVC*WPRGRS
Trigger: GCTCCGGCCCCGCGGCCACCAACAAACGCCACAGCA...GCTTGGGCTCCGGCCCCGCGGCCACCAACAAACGCCACAGCACAAGTGATAAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
CDS-3UTR CCA 90 bp TCCAGGATGGCCTCGGGGGACATCCAGCGCAGCGGCACCCAGGCCTGGCGGAAGGCACAAAGCGGTTGTTaGACAGGTGCTCCATGCCCA +
Preference number: 4 (lower is better)
Translates to: SRMASGDIQRSGTQAWRKAQSGC*TGAPCP
Trigger: TGGGCATGGAGCACCTGTCCAACAACCGCTTTGTGC...CTTCCGCCAGGCCTGGGTGCCGCTGCGCTGGATGTCCCCCGAGGCCATCCTGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
CDS-3UTR CCA 90 bp CTGCCTGGTCCCTGGCAGGTCAAGTCTGACACTTGGCCAAGGGCTCGGCCGCCCGACACAAGGAAGCCCTaGAGGCTGAGGCTGGGGCTA +
Preference number: 4 (lower is better)
Translates to: LPGPWQVKSDTWPRARPPDTRKP*RLRLGL
Trigger: TAGCCCCAGCCTCAGCCTCCAGGGCTTCCTTGTGTC...GGGCGGCCGAGCCCTTGGCCAAGTGTCAGACTTGACCTGCCAGGGACCAGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476760.1
CDS-3UTR TCA 90 bp TGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTCTCAGGAAAAGGAGCTaGGGGCGCACGGCGGGCGCG +
Preference number: 4 (lower is better)
Translates to: WVWVSVHKPRVGRTHLLCLRKRS*GRTAGA
Trigger: CGCGCCCGCCGTGCGCCCTCAGCTCCTTTTCCTGAG...ACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR TCA 90 bp CTGTTGCCCGGGCTGAAGAGCAACGGTGCGATCTCAGCTCATTGCAACCTCTGCGCAGCAGCAGGACGCTaGGCAGAGGCAACCGGCGGG +
Preference number: 4 (lower is better)
Translates to: LLPGLKSNGAISAHCNLCAAAGR*AEATGG
Trigger: CCCGCCGGTTGCCTCTGCTCAGCGTCCTGCTGCTGC...GCAGAGGTTGCAATGAGCTGAGATCGCACCGTTGCTCTTCAGCCCGGGCAACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471863.5
CDS-3UTR TCA 90 bp CCTCGGGGGACATCCAGCGCAGCGGCACCCAGGCCTGGCGGAAGTGGTAGTACTTCCTTGCCTTTCCACTaGATCAGCGGCTTGGGGTCC +
Preference number: 4 (lower is better)
Translates to: PRGTSSAAAPRPGGSGSTSLPFH*ISGLGS
Trigger: GGACCCCAAGCCGCTGATTCAGTGGAAAGGCAAGGA...AGTACTACCACTTCCGCCAGGCCTGGGTGCCGCTGCGCTGGATGTCCCCCGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR TCA 90 bp CCCTGCCCAGGCCATCCTGAGCGGGCTCCCTCCTCACGGCTTGCTGTCCACGGTTTCTTGGATCTCTGCTaGGGGCTGCCCGTTCTGCAA +
Preference number: 4 (lower is better)
Translates to: PCPGHPERAPSSRLAVHGFLDLC*GLPVLQ
Trigger: TTGCAGAACGGGCAGCCCTCAGCAGAGATCCAAGAA...ACCGTGGACAGCAAGCCGTGAGGAGGGAGCCCGCTCAGGATGGCCTGGGCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
CDS-3UTR TCA 90 bp GGGGGACATCCAGCGCAGCGGCACCCAGGCCTGGCGGAAGTGGTAGTACTCACTCTTGTCTCTGGGCACTaGCCAGGCAGTTACGCGCAG +
Preference number: 4 (lower is better)
Translates to: GGHPAQRHPGLAEVVVLTLVSGH*PGSYAQ
Trigger: CTGCGCGTAACTGCCTGGTCAGTGCCCAGAGACAAG...AGTGAGTACTACCACTTCCGCCAGGCCTGGGTGCCGCTGCGCTGGATGTCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
CDS-3UTR TCA 90 bp GTGGGGAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTGGGCAGCCCTCGGGCTaGGGAAGTCTAGCCTTCCCA +
Preference number: 4 (lower is better)
Translates to: VGKTWVWVSVHKPRVGRTGQPSG*GSLAFP
Trigger: TGGGAAGGCTAGACTTCCTCAGCCCGAGGGCTGCCC...AGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTCCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR TCA 90 bp AGGCCCTGCTCAGACCTCAGCAATGCCTGTTGCACTAGGGCAGGGGCCTCAGGGCGCTGGCAATCTCACTaGAGGAGGGCCGGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: RPCSDLSNACCTRAGASGRWQSH*RRAGPW
Trigger: CCAAGGACCGGCCCTCCTTCAGTGAGATTGCCAGCG...CCCTGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAGGTCTGAGCAGGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000489707.5
CDS-3UTR TCA 90 bp GAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTCTGCCCAGGCCATCCTaGGCGGGCTCCCTCCTCACG +
Preference number: 4 (lower is better)
Translates to: EDVGLGQCAQAQSGEDSLLPRPS*AGSLLT
Trigger: CGTGAGGAGGGAGCCCGCTCAGGATGGCCTGGGCAG...AAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR TCA 90 bp TCCCCTGCCCAGGCCATCCTGAGCGGGCTCCCTCCTCACGGCTTGCTGTCCACGGCCAGGCACTTAGGATaGGGAAAGGAGAGAAGGGTG +
Preference number: 4 (lower is better)
Translates to: SPAQAILSGLPPHGLLSTARHLG*GKERRV
Trigger: CACCCTTCTCTCCTTTCCTCATCCTAAGTGCCTGGC...CGTGGACAGCAAGCCGTGAGGAGGGAGCCCGCTCAGGATGGCCTGGGCAGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR TCA 90 bp AGGCCCTGCTCAGACCTCAGCAATGCCTGTTGCACTAGGGCAGGGGCCTCAGGGCCCTCCTCCAAGCCCTaGGCCTTTGCCAGGAACACC +
Preference number: 4 (lower is better)
Translates to: RPCSDLSNACCTRAGASGPSSKP*AFARNT
Trigger: GGTGTTCCTGGCAAAGGCTCAGGGCTTGGAGGAGGG...CCCTGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAGGTCTGAGCAGGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR TCA 90 bp ATCACTTGTGCTGTGGCGTTTGTTGGTGGCCGCGGGGCCGGAGCCCAAGCTGGTTGTGCAGCAGCATGGTaGGACGGCCGAATCCCCACC +
Preference number: 4 (lower is better)
Translates to: ITCAVAFVGGRGAGAQAGCAAAW*DGRIPT
Trigger: GGTGGGGATTCGGCCGTCTCACCATGCTGCTGCACA...ACCAGCTTGGGCTCCGGCCCCGCGGCCACCAACAAACGCCACAGCACAAGTGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461100.5
ENST00000494146.5
ENST00000497957.1
CDS-3UTR TCA 90 bp TGCCTGCCTGGTCCCTGGCAGGTCAAGTCTGACACTTGGCCAAGGGCTCGGCCGCCAGGCCTCAGTCATTaGGGGTCTGACAGGGGGACT +
Preference number: 4 (lower is better)
Translates to: CLPGPWQVKSDTWPRARPPGLSH*GSDRGT
Trigger: AGTCCCCCTGTCAGACCCTCAATGACTGAGGCCTGG...CGGCCGAGCCCTTGGCCAAGTGTCAGACTTGACCTGCCAGGGACCAGGCAGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476760.1
CDS-3UTR GCA 90 bp GAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTCCGGCGCCCCTGCAGTaGATCCTGGGAGGACGGCTG +
Preference number: 4 (lower is better)
Translates to: EDVGLGQCAQAQSGEDSLPAPLQ*ILGGRL
Trigger: CAGCCGTCCTCCCAGGATGCACTGCAGGGGCGCCGG...AAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp CTGACACTTGGCCAAGGGCTCGGCCGCCCTTTCCATTTGCACAAGCATGCAGCAAGCGCCCGGCGCCCCTaGAGTGCATCCTGGGAGGAC +
Preference number: 4 (lower is better)
Translates to: LTLGQGLGRPFHLHKHAASARRP*SASWED
Trigger: GTCCTCCCAGGATGCACTGCAGGGGCGCCGGGCGCT...TGCTGCATGCTTGTGCAAATGGAAAGGGCGGCCGAGCCCTTGGCCAAGTGTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476760.1
CDS-3UTR GCA 90 bp ACGGTGCTGTCTCCCAGGGCGCTGGCAATCTCACTGAAGGAGGGCCGGTCCTTGCAAAGCTCAGGCTGCTaGCCTGGGCGAAACGCCGCT +
Preference number: 4 (lower is better)
Translates to: TVLSPRALAISLKEGRSLQSSGC*PGRNAA
Trigger: AGCGGCGTTTCGCCCAGGGCAGCAGCCTGAGCTTTG...CAAGGACCGGCCCTCCTTCAGTGAGATTGCCAGCGCCCTGGGAGACAGCACCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR GCA 90 bp AGGCCCTGCTCAGACCTCAGCAATGCCTGTTGCACTAGGGCAGGGGCCTCAGGGGCAGCGGTAGATCCCTaGATTGCGTGGCCGGACCTG +
Preference number: 4 (lower is better)
Translates to: RPCSDLSNACCTRAGASGAAVDP*IAWPDL
Trigger: CAGGTCCGGCCACGCAATGCAGGGATCTACCGCTGC...CCCTGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAGGTCTGAGCAGGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp GCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTCAGCCTCCCAAAGGATGGGTGGGCCCCTCTaGCCCTGGCCAATGCAGCGG +
Preference number: 4 (lower is better)
Translates to: AQLKALVAQFGSKSASQRMGGPL*PWPMQR
Trigger: CCGCTGCATTGGCCAGGGGCAGAGGGGCCCACCCAT...CCTTTGGGAGGCTGACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp ATCTTATCACTTGTGCTGTGGCGTTTGTTGGTGGCCGCGGGGCCGGAGCCCAAGATGGGTGGGCCCCTCTaGCCCTGGCCAATGCAGCGG +
Preference number: 4 (lower is better)
Translates to: ILSLVLWRLLVAAGPEPKMGGPL*PWPMQR
Trigger: CCGCTGCATTGGCCAGGGGCAGAGGGGCCCACCCAT...CTTGGGCTCCGGCCCCGCGGCCACCAACAAACGCCACAGCACAAGTGATAAGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR GCA 90 bp CCTGCTCAGACCTCAGCAATGCCTGTTGCACTAGGGCAGGGGCCTCAGGGCCCACCTTCTGGTAGACCCTaGCATGGGTGGGCAGCCGGA +
Preference number: 4 (lower is better)
Translates to: PAQTSAMPVALGQGPQGPPSGRP*HGWAAG
Trigger: TCCGGCTGCCCACCCATGGCAGGGTCTACCAGAAGG...TGGGCCCTGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAGGTCTGAGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp CAAAGGCCCACCGTTGAGGCATTCCATCTCTGGCTCCTCGCCCTCGGGCTGCTTCTTGCGCCTCGATGCTaGCGGCTGGGGTGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: QRPTVEAFHLWLLALGLLLAPRC*RLGCCS
Trigger: TGAGCAGCACCCCAGCCGGCAGCATCGAGGCGCAAG...AAGCAGCCCGAGGGCGAGGAGCCAGAGATGGAATGCCTCAACGGTGGGCCTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR GCA 90 bp GAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGGGCTTGCGCCTCGATaGTGCCGGCTGGGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: EDVGLGQCAQAQSGEDSLGLAPR*CRLGCC
Trigger: GCAGCACCCCAGCCGGCAGCATCGAGGCGCAAGCCC...AAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp CCTGCTCAGACCTCAGCAATGCCTGTTGCACTAGGGCAGGGGCCTCAGGGCCCAACTTGGACACGGGCTTaGGCCTCGATGCTGCCGGCT +
Preference number: 4 (lower is better)
Translates to: PAQTSAMPVALGQGPQGPTWTRA*ASMLPA
Trigger: AGCCGGCAGCATCGAGGCGCAAGCCCGTGTCCAAGT...TGGGCCCTGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAGGTCTGAGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp TGCTCAGACCTCAGCAATGCCTGTTGCACTAGGGCAGGGGCCTCAGGGCCCAGGGCACGAATCTGGCCCTaGGGCCCGTTGGAGGCAATG +
Preference number: 4 (lower is better)
Translates to: CSDLSNACCTRAGASGPRARIWP*GPLEAM
Trigger: CATTGCCTCCAACGGGCCGCAGGGCCAGATTCGTGC...CCTGGGCCCTGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAGGTCTGAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp AGGCCCTGCTCAGACCTCAGCAATGCCTGTTGCACTAGGGCAGGGGCCTCAGGGCCCTCGGGCTGCTTCTaGAGCCGCTTGGCTTTGCAG +
Preference number: 4 (lower is better)
Translates to: RPCSDLSNACCTRAGASGPSGCF*SRLALQ
Trigger: CTGCAAAGCCAAGCGGCTGCAGAAGCAGCCCGAGGG...CCCTGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAGGTCTGAGCAGGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp TATCACTTGTGCTGTGGCGTTTGTTGGTGGCCGCGGGGCCGGAGCCCAAGCTGGCCCTCGGGCTGCTTCTaGAGCCGCTTGGCTTTGCAG +
Preference number: 4 (lower is better)
Translates to: YHLCCGVCWWPRGRSPSWPSGCF*SRLALQ
Trigger: CTGCAAAGCCAAGCGGCTGCAGAAGCAGCCCGAGGG...CCAGCTTGGGCTCCGGCCCCGCGGCCACCAACAAACGCCACAGCACAAGTGATA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
CDS-3UTR GCA 90 bp GTGGGGAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTTCCTCGCCCTCGGGCTaGTTCTGCAGCCGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: VGKTWVWVSVHKPRVGRTSSPSG*FCSRLA
Trigger: AGCCAAGCGGCTGCAGAAGCAGCCCGAGGGCGAGGA...AGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTCCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp TGGGGTCCAGGATGCGGTCCTTGCCTTTCCACTGAATCAGCGGCTTGGGGTCCCTCCTCGCCCTCGGGCTaGTTCTGCAGCCGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: WGPGCGPCLSTESAAWGPSSPSG*FCSRLA
Trigger: AGCCAAGCGGCTGCAGAAGCAGCCCGAGGGCGAGGA...GGGACCCCAAGCCGCTGATTCAGTGGAAAGGCAAGGACCGCATCCTGGACCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR GCA 90 bp ACGGTGCTGTCTCCCAGGGCGCTGGCAATCTCACTGAAGGAGGGCCGGTCCTTGGAGGGCTGCCCGTTCTaGAAAGGCCCACCGTTGAGG +
Preference number: 4 (lower is better)
Translates to: TVLSPRALAISLKEGRSLEGCPF*KGPPLR
Trigger: CCTCAACGGTGGGCCTTTGCAGAACGGGCAGCCCTC...CAAGGACCGGCCCTCCTTCAGTGAGATTGCCAGCGCCCTGGGAGACAGCACCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR CCA 90 bp TGCCTGCCTGGTCCCTGGCAGGTCAAGTCTGACACTTGGCCAAGGGCTCGGCCGCCCTGCAGTGCATCCTaGGAGGACGGCTGCTTGATG +
Preference number: 4 (lower is better)
Translates to: CLPGPWQVKSDTWPRARPPCSAS*EDGCLM
Trigger: CATCAAGCAGCCGTCCTCCCAGGATGCACTGCAGGG...CGGCCGAGCCCTTGGCCAAGTGTCAGACTTGACCTGCCAGGGACCAGGCAGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476760.1
CDS-3UTR CCA 90 bp GAAGTGCATCTTATCACTTGTGCTGTGGCGTTTGTTGGTGGCCGCGGGGCCGGACGCCGCTCCGTGTCCTaGACAGGGGCCCCATCGAGC +
Preference number: 4 (lower is better)
Translates to: EVHLITCAVAFVGGRGAGRRSVS*TGAPSS
Trigger: GCTCGATGGGGCCCCTGTCCAGGACACGGAGCGGCG...TCCGGCCCCGCGGCCACCAACAAACGCCACAGCACAAGTGATAAGATGCACTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR CCA 90 bp GCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTCAGCCTCCCAAAGGCTCAGGCTGCTGCCCTaGGCGAAACGCCGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: AQLKALVAQFGSKSASQRLRLLP*AKRRSV
Trigger: CACGGAGCGGCGTTTCGCCCAGGGCAGCAGCCTGAG...CCTTTGGGAGGCTGACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp CCCGTTCTGCAAAGGCCCACCGTTGAGGCATTCCATCTCTGGCTCCTCGCCCTCGGCTCTGCGGAGGTGTaGGGGGCGACTGCGGTTAGT +
Preference number: 4 (lower is better)
Translates to: PVLQRPTVEAFHLWLLALGSAEV*GATAVS
Trigger: ACTAACCGCAGTCGCCCCCCACACCTCCGCAGAGCC...GAGGGCGAGGAGCCAGAGATGGAATGCCTCAACGGTGGGCCTTTGCAGAACGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR CCA 90 bp AGGCCCTGCTCAGACCTCAGCAATGCCTGTTGCACTAGGGCAGGGGCCTCAGGGGCTCTGGCAGACCCTTaGGGGGAAGGCAGGTCACAC +
Preference number: 4 (lower is better)
Translates to: RPCSDLSNACCTRAGASGALADP*GEGRSH
Trigger: GTGTGACCTGCCTTCCCCCCAAGGGTCTGCCAGAGC...CCCTGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAGGTCTGAGCAGGGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp GGCCCACCGTTGAGGCATTCCATCTCTGGCTCCTCGCCCTCGGGCTGCTTCTGCGGCCCTGCGGCCCGTTaGAGGCAATGCAAGTGTAGT +
Preference number: 4 (lower is better)
Translates to: GPPLRHSISGSSPSGCFCGPAAR*RQCKCS
Trigger: ACTACACTTGCATTGCCTCCAACGGGCCGCAGGGCC...GCAGAAGCAGCCCGAGGGCGAGGAGCCAGAGATGGAATGCCTCAACGGTGGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR CCA 90 bp AGGCCCTGCTCAGACCTCAGCAATGCCTGTTGCACTAGGGCAGGGGCCTCAGGGACATGGGCACGAATCTaGCCCTGCGGCCCGTTGGAG +
Preference number: 4 (lower is better)
Translates to: RPCSDLSNACCTRAGASGTWARI*PCGPLE
Trigger: CTCCAACGGGCCGCAGGGCCAGATTCGTGCCCATGT...CCCTGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAGGTCTGAGCAGGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp GAGGTGGCAGGGAAAACTGCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCGGCTTGGGGTCCCCCTaGGCCTCGCACTGCAGTAGG +
Preference number: 4 (lower is better)
Translates to: EVAGKTAQLKALVAQFGSGLGSP*ASHCSR
Trigger: CCTACTGCAGTGCGAGGCCCAGGGGGACCCCAAGCC...GGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCCACCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp GCCATCCTGAGCGGGCTCCCTCCTCACGGCTTGCTGTCCACGGTGCTGTCTCCCGGAAGATGTGCATCCTaGGTCCCAGCTTGGTGGGGT +
Preference number: 4 (lower is better)
Translates to: AILSGLPPHGLLSTVLSPGRCAS*VPAWWG
Trigger: ACCCCACCAAGCTGGGACCCAGGATGCACATCTTCC...GGGAGACAGCACCGTGGACAGCAAGCCGTGAGGAGGGAGCCCGCTCAGGATGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR CCA 90 bp TGTGCTGTGGCGTTTGTTGGTGGCCGCGGGGCCGGAGCCCAAGCTGGTCAAGGCGCTTCTGCAGCCGCTTaGCTTTGCAGCGCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: CAVAFVGGRGAGAQAGQGASAAA*LCSASC
Trigger: GCAAGAAGCGCTGCAAAGCCAAGCGGCTGCAGAAGC...GCCTTGACCAGCTTGGGCTCCGGCCCCGCGGCCACCAACAAACGCCACAGCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
CDS-3UTR CCA 90 bp ACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGCTGTGGCGTTTGTTaGTGGCCGCGGGGCCGGAGC +
Preference number: 4 (lower is better)
Translates to: TWVWVSVHKPRVGRTHLLCCGVC*WPRGRS
Trigger: GCTCCGGCCCCGCGGCCACCAACAAACGCCACAGCA...CAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp GAGGTGGCAGGGAAAACTGCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCTGCTGTGGCGTTTGTTaGTGGCCGCGGGGCCGGAGC +
Preference number: 4 (lower is better)
Translates to: EVAGKTAQLKALVAQFGSCCGVC*WPRGRS
Trigger: GCTCCGGCCCCGCGGCCACCAACAAACGCCACAGCA...GGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCCACCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp ATCTTATCACTTGTGCTGTGGCGTTTGTTGGTGGCCGCGGGGCCGGAGCCCAAGTGCTGTGGCGTTTGTTaGTGGCCGCGGGGCCGGAGC +
Preference number: 4 (lower is better)
Translates to: ILSLVLWRLLVAAGPEPKCCGVC*WPRGRS
Trigger: GCTCCGGCCCCGCGGCCACCAACAAACGCCACAGCA...CTTGGGCTCCGGCCCCGCGGCCACCAACAAACGCCACAGCACAAGTGATAAGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
CDS-3UTR CCA 90 bp CTGCCACTCCCTCCTCCAAGCCCTGAGCCTTTGCCAGGAACACCTCCCCAAACTTGCTGTGGCGTTTGTTaGTGGCCGCGGGGCCGGAGC +
Preference number: 4 (lower is better)
Translates to: LPLPPPSPEPLPGTPPQTCCGVC*WPRGRS
Trigger: GCTCCGGCCCCGCGGCCACCAACAAACGCCACAGCA...AGTTTGGGGAGGTGTTCCTGGCAAAGGCTCAGGGCTTGGAGGAGGGAGTGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000470019.5
ENST00000497957.1
CDS-3UTR CCA 90 bp AGGCCCTGCTCAGACCTCAGCAATGCCTGTTGCACTAGGGCAGGGGCCTCAGGGAGTCACCCTCCAGGATaGCCTCGGGGGACATCCAGC +
Preference number: 4 (lower is better)
Translates to: RPCSDLSNACCTRAGASGSHPPG*PRGTSS
Trigger: GCTGGATGTCCCCCGAGGCCATCCTGGAGGGTGACT...CCCTGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAGGTCTGAGCAGGGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000489707.5
3UTR CAA 72 bp CAAGTAGCCGGGTTTGCCCTCCTCCAGCTGGCTGTCTaGGGGCTTCTTCAGCCAGGAGGGCACAGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: QVAGFALLQLAV*GLLQPGGHSGH
Trigger: GTGGCCACTGTGCCCTCCTGGCTGAAGAAGCCCCAAGACAGCCAGCTGGAGGAGGGCAAACCCGGCTACTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR TCA 90 bp CAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTCAGCCTCCCAAAGGATGCTCAGGAAAAGGAGCTaGGGGCGCACGGCGGGCGCG +
Preference number: 4 (lower is better)
Translates to: QLKALVAQFGSKSASQRMLRKRS*GRTAGA
Trigger: CGCGCCCGCCGTGCGCCCTCAGCTCCTTTTCCTGAG...CATCCTTTGGGAGGCTGACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR TCA 90 bp CAGCCGATAGAGTTTGGAAGGGCAGCCCTCGGGCTGAGGAAGTCTAGCCTTCCCGTGTGGCTTCCAGGATaGTGGGTGGGCCCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: QPIEFGRAALGLRKSSLPVWLPG*WVGPSA
Trigger: GGCAGAGGGGCCCACCCATCATCCTGGAAGCCACAC...GGGAAGGCTAGACTTCCTCAGCCCGAGGGCTGCCCTTCCAAACTCTATCGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR TCA 90 bp ACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGACATCCTGTCTCCGCTaGCCAGCCAGGTTGGCCGCG +
Preference number: 4 (lower is better)
Translates to: TWVWVSVHKPRVGRTHLLTSCLR*PARLAA
Trigger: CGCGGCCAACCTGGCTGGTCAGCGGAGACAGGATGT...CAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR TCA 90 bp AGCCTAGCCCTCCCCAGGCAAAGTTGGCAGATGAGTGGCAGAGTTGGACCCGGTACATCCTGTCTCCGCTaGCCAGCCAGGTTGGCCGCG +
Preference number: 4 (lower is better)
Translates to: SLALPRQSWQMSGRVGPGTSCLR*PARLAA
Trigger: CGCGGCCAACCTGGCTGGTCAGCGGAGACAGGATGT...ACCGGGTCCAACTCTGCCACTCATCTGCCAACTTTGCCTGGGGAGGGCTAGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR TCA 90 bp GCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTCAGCCTCCCAAAGGGGGCAGCCCTCGGGCTaGGGAAGTCTAGCCTTCCCA +
Preference number: 4 (lower is better)
Translates to: AQLKALVAQFGSKSASQRGQPSG*GSLAFP
Trigger: TGGGAAGGCTAGACTTCCTCAGCCCGAGGGCTGCCC...CCTTTGGGAGGCTGACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR TCA 90 bp ACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGGGGCAGCCCTCGGGCTaGGGAAGTCTAGCCTTCCCA +
Preference number: 4 (lower is better)
Translates to: TWVWVSVHKPRVGRTHLLGQPSG*GSLAFP
Trigger: TGGGAAGGCTAGACTTCCTCAGCCCGAGGGCTGCCC...CAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR TCA 90 bp AGCCAAGTCCTTATGCACAAAGCGGTTGTTGGACAGGTGCTCCATGCCCAGGGCCTGCCCAGGCCATCCTaGGCGGGCTCCCTCCTCACG +
Preference number: 4 (lower is better)
Translates to: SQVLMHKAVVGQVLHAQGLPRPS*AGSLLT
Trigger: CGTGAGGAGGGAGCCCGCTCAGGATGGCCTGGGCAG...GCCCTGGGCATGGAGCACCTGTCCAACAACCGCTTTGTGCATAAGGACTTGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
CDS-3UTR TCA 90 bp AGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCCCTGCCCAGGCCATCCTaGGCGGGCTCCCTCCTCACG +
Preference number: 4 (lower is better)
Translates to: RDLAHHAVSFPLEMSSPALPRPS*AGSLLT
Trigger: CGTGAGGAGGGAGCCCGCTCAGGATGGCCTGGGCAG...GGCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR TCA 90 bp TTCTGCAAAGGCCCACCGTTGAGGCATTCCATCTCTGGCTCCTCGCCCTCGGGCTGTGCAGCAGCATGGTaGGACGGCCGAATCCCCACC +
Preference number: 4 (lower is better)
Translates to: FCKGPPLRHSISGSSPSGCAAAW*DGRIPT
Trigger: GGTGGGGATTCGGCCGTCTCACCATGCTGCTGCACA...GCCCGAGGGCGAGGAGCCAGAGATGGAATGCCTCAACGGTGGGCCTTTGCAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461100.5
ENST00000494146.5
ENST00000497957.1
CDS-3UTR TCA 90 bp GGCCCACCGTTGAGGCATTCCATCTCTGGCTCCTCGCCCTCGGGCTGCTTCTGCACGACAGCCCGGCTCTaGGCAAGGACTCTAAGACTG +
Preference number: 4 (lower is better)
Translates to: GPPLRHSISGSSPSGCFCTTARL*ARTLRL
Trigger: CAGTCTTAGAGTCCTTGCTCAGAGCCGGGCTGTCGT...GCAGAAGCAGCCCGAGGGCGAGGAGCCAGAGATGGAATGCCTCAACGGTGGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461100.5
ENST00000494146.5
ENST00000497957.1
CDS-3UTR GCA 90 bp GCATCTTATCACTTGTGCTGTGGCGTTTGTTGGTGGCCGCGGGGCCGGAGCCCACAGCCGGTCCACAGCTaGAAAGCTCAGGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: ASYHLCCGVCWWPRGRSPQPVHS*KAQAAA
Trigger: GGCAGCAGCCTGAGCTTTGCAGCTGTGGACCGGCTG...TGGGCTCCGGCCCCGCGGCCACCAACAAACGCCACAGCACAAGTGATAAGATGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR GCA 90 bp AGGCCCTGCTCAGACCTCAGCAATGCCTGTTGCACTAGGGCAGGGGCCTCAGGGAAGGTGCCAGAGTCCTaGAGCCGGTCCACAGCTGCA +
Preference number: 4 (lower is better)
Translates to: RPCSDLSNACCTRAGASGKVPES*SRSTAA
Trigger: TGCAGCTGTGGACCGGCTGCAGGACTCTGGCACCTT...CCCTGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAGGTCTGAGCAGGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp CACTTGGACACGGGCTTGCGCCTCGATGCTGCCGGCTGGGGTGCTGCTCATACACCACACACTGGAAGGTaGCAGAGTCCTGCAGCCGGT +
Preference number: 4 (lower is better)
Translates to: HLDTGLRLDAAGWGAAHTPHTGR*QSPAAG
Trigger: ACCGGCTGCAGGACTCTGGCACCTTCCAGTGTGTGG...TGTATGAGCAGCACCCCAGCCGGCAGCATCGAGGCGCAAGCCCGTGTCCAAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR GCA 90 bp TGCTCAGACCTCAGCAATGCCTGTTGCACTAGGGCAGGGGCCTCAGGGCCCAGGTACCACGTCCTGGGGTaGCAGCACCACCCTGGCAAA +
Preference number: 4 (lower is better)
Translates to: CSDLSNACCTRAGASGPRYHVLG*QHHPGK
Trigger: TTTGCCAGGGTGGTGCTGGCACCCCAGGACGTGGTA...CCTGGGCCCTGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAGGTCTGAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp ACGGTGCTGTCTCCCAGGGCGCTGGCAATCTCACTGAAGGAGGGCCGGTCCTTGGGTAGATCCCTGCATTaGGTGGCCGGACCTGGGTCA +
Preference number: 4 (lower is better)
Translates to: TVLSPRALAISLKEGRSLGRSLH*VAGPGS
Trigger: TGACCCAGGTCCGGCCACGCAATGCAGGGATCTACC...CAAGGACCGGCCCTCCTTCAGTGAGATTGCCAGCGCCCTGGGAGACAGCACCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR GCA 90 bp CCGTTCTGCAAAGGCCCACCGTTGAGGCATTCCATCTCTGGCTCCTCGCCCTCGGCAGCGGTAGATCCCTaGATTGCGTGGCCGGACCTG +
Preference number: 4 (lower is better)
Translates to: PFCKGPPLRHSISGSSPSAAVDP*IAWPDL
Trigger: CAGGTCCGGCCACGCAATGCAGGGATCTACCGCTGC...CGAGGGCGAGGAGCCAGAGATGGAATGCCTCAACGGTGGGCCTTTGCAGAACGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR GCA 90 bp GGCAGGGAAAACTGCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTCATGGGTGGGCCCCTCTaGCCCTGGCCAATGCAGCGG +
Preference number: 4 (lower is better)
Translates to: GRENCPAQSPSRPVWVQVMGGPL*PWPMQR
Trigger: CCGCTGCATTGGCCAGGGGCAGAGGGGCCCACCCAT...GACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp GGTGGCAGGGAAAACTGCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAATGGGTGGGCCCCTCTaGCCCTGGCCAATGCAGCGG +
Preference number: 4 (lower is better)
Translates to: GGRENCPAQSPSRPVWVQMGGPL*PWPMQR
Trigger: CCGCTGCATTGGCCAGGGGCAGAGGGGCCCACCCAT...TTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp GTGGGGAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCCTTCTGGTAGACCCTaGCATGGGTGGGCAGCCGGA +
Preference number: 4 (lower is better)
Translates to: VGKTWVWVSVHKPRVGRTPSGRP*HGWAAG
Trigger: TCCGGCTGCCCACCCATGGCAGGGTCTACCAGAAGG...AGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTCCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp CCTGCTCAGACCTCAGCAATGCCTGTTGCACTAGGGCAGGGGCCTCAGGGCCCATGCTGCCGGCTGGGGTaGTGCTCATACAACGGTACC +
Preference number: 4 (lower is better)
Translates to: PAQTSAMPVALGQGPQGPCCRLG*CSYNGT
Trigger: GGTACCGTTGTATGAGCAGCACCCCAGCCGGCAGCA...TGGGCCCTGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAGGTCTGAGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp CACCACGTTGGCGTGGTTCAGCTTCCCAAACATCTCCAACTCCCTCCGGAAGTCGGGCTTGCGCCTCGATaGTGCCGGCTGGGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: HHVGVVQLPKHLQLPPEVGLAPR*CRLGCC
Trigger: GCAGCACCCCAGCCGGCAGCATCGAGGCGCAAGCCC...GACTTCCGGAGGGAGTTGGAGATGTTTGGGAAGCTGAACCACGCCAACGTGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR GCA 90 bp AGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCCGGGCTTGCGCCTCGATaGTGCCGGCTGGGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: RDLAHHAVSFPLEMSSPAGLAPR*CRLGCC
Trigger: GCAGCACCCCAGCCGGCAGCATCGAGGCGCAAGCCC...GGCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR GCA 90 bp GCCCAGGCCATCCTGAGCGGGCTCCCTCCTCACGGCTTGCTGTCCACGGTGCTGGAGGCTGCTCCCATCTaGCCGTTCCCACTTAATAGT +
Preference number: 4 (lower is better)
Translates to: AQAILSGLPPHGLLSTVLEAAPI*PFPLNS
Trigger: ACTATTAAGTGGGAACGGGCAGATGGGAGCAGCCTC...CAGCACCGTGGACAGCAAGCCGTGAGGAGGGAGCCCGCTCAGGATGGCCTGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR GCA 90 bp TTGTGCTGTGGCGTTTGTTGGTGGCCGCGGGGCCGGAGCCCAAGCTGGTCAAGGTGGTGGGGTCCAGGATaGGGTCCTTGCCTTTCCACT +
Preference number: 4 (lower is better)
Translates to: LCCGVCWWPRGRSPSWSRWWGPG*GPCLST
Trigger: AGTGGAAAGGCAAGGACCGCATCCTGGACCCCACCA...CCTTGACCAGCTTGGGCTCCGGCCCCGCGGCCACCAACAAACGCCACAGCACAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR GCA 90 bp ACCTCCCCAAACTCACTCTTCCCCAGCGTGGTGATGGGCTGCAGGCTAGACCGTTCCTCGCCCTCGGGCTaGTTCTGCAGCCGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: TSPNSLFPSVVMGCRLDRSSPSG*FCSRLA
Trigger: AGCCAAGCGGCTGCAGAAGCAGCCCGAGGGCGAGGA...ACGGTCTAGCCTGCAGCCCATCACCACGCTGGGGAAGAGTGAGTTTGGGGAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
CDS-3UTR GCA 90 bp GCCCAGCACGGCAATGATGTAGGCCACAGCGGCACCCACCGACAACCCAATGGTGAGGGCTGCCCGTTCTaGAAAGGCCCACCGTTGAGG +
Preference number: 4 (lower is better)
Translates to: AQHGNDVGHSGTHRQPNGEGCPF*KGPPLR
Trigger: CCTCAACGGTGGGCCTTTGCAGAACGGGCAGCCCTC...ACCATTGGGTTGTCGGTGGGTGCCGCTGTGGCCTACATCATTGCCGTGCTGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
CDS-3UTR GCA 90 bp TGCTCAGACCTCAGCAATGCCTGTTGCACTAGGGCAGGGGCCTCAGGGCCCAGGAGCGTGGTGATGGGCTaGAGGCTAGACCGTGGGAAG +
Preference number: 4 (lower is better)
Translates to: CSDLSNACCTRAGASGPRSVVMG*RLDRGK
Trigger: CTTCCCACGGTCTAGCCTGCAGCCCATCACCACGCT...CCTGGGCCCTGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAGGTCTGAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
CDS-3UTR GCA 90 bp ATCACTTGTGCTGTGGCGTTTGTTGGTGGCCGCGGGGCCGGAGCCCAAGCTGGTAGCGTGGTGATGGGCTaGAGGCTAGACCGTGGGAAG +
Preference number: 4 (lower is better)
Translates to: ITCAVAFVGGRGAGAQAGSVVMG*RLDRGK
Trigger: CTTCCCACGGTCTAGCCTGCAGCCCATCACCACGCT...ACCAGCTTGGGCTCCGGCCCCGCGGCCACCAACAAACGCCACAGCACAAGTGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
CDS-3UTR GCA 90 bp CCTGCTCAGACCTCAGCAATGCCTGTTGCACTAGGGCAGGGGCCTCAGGGCCCACGGTTGTTGGACAGGTaGTCCATGCCCAGGGCTACC +
Preference number: 4 (lower is better)
Translates to: PAQTSAMPVALGQGPQGPRLLDR*SMPRAT
Trigger: GGTAGCCCTGGGCATGGAGCACCTGTCCAACAACCG...TGGGCCCTGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAGGTCTGAGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp AGGCCCTGCTCAGACCTCAGCAATGCCTGTTGCACTAGGGCAGGGGCCTCAGGGGGAAAGGCCAGGCCCTaGTCAGACCTCAGCAATGCC +
Preference number: 4 (lower is better)
Translates to: RPCSDLSNACCTRAGASGGKARP*SDLSNA
Trigger: GGCATTGCTGAGGTCTGAGCAGGGCCTGGCCTTTCC...CCCTGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAGGTCTGAGCAGGGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp GTGGCCGGACCTGGGTCAGCAGCAGAGACCCGTTGGCAAACACTGTGGCTCTGCGGAAAGGCCAGGCCCTaGTCAGACCTCAGCAATGCC +
Preference number: 4 (lower is better)
Translates to: VAGPGSAAETRWQTLWLCGKARP*SDLSNA
Trigger: GGCATTGCTGAGGTCTGAGCAGGGCCTGGCCTTTCC...GCAGAGCCACAGTGTTTGCCAACGGGTCTCTGCTGCTGACCCAGGTCCGGCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR GCA 90 bp GTAGAGAAGTCACCCTCCAGGATGGCCTCGGGGGACATCCAGCGCAGCGGCACCAAGTACCAGGGTCTCTaGCACTCCCTCCTCCAAGCC +
Preference number: 4 (lower is better)
Translates to: VEKSPSRMASGDIQRSGTKYQGL*HSLLQA
Trigger: GGCTTGGAGGAGGGAGTGGCAGAGACCCTGGTACTT...GGTGCCGCTGCGCTGGATGTCCCCCGAGGCCATCCTGGAGGGTGACTTCTCTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR GCA 90 bp TCCCCTGCCCAGGCCATCCTGAGCGGGCTCCCTCCTCACGGCTTGCTGTCCACGGCTGCTGCTCATCCTTaGTCTGCAGGCTCTTCACAA +
Preference number: 4 (lower is better)
Translates to: SPAQAILSGLPPHGLLSTAAAHP*SAGSSQ
Trigger: TTGTGAAGAGCCTGCAGAGCAAGGATGAGCAGCAGC...CGTGGACAGCAAGCCGTGAGGAGGGAGCCCGCTCAGGATGGCCTGGGCAGGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR GCA 90 bp GCTGTGGCGTTTGTTGGTGGCCGCGGGGCCGGAGCCCAAGCTGGTCAAGGCCACGCTGCTGCTCATCCTTaGTCTGCAGGCTCTTCACAA +
Preference number: 4 (lower is better)
Translates to: AVAFVGGRGAGAQAGQGHAAAHP*SAGSSQ
Trigger: TTGTGAAGAGCCTGCAGAGCAAGGATGAGCAGCAGC...GTGGCCTTGACCAGCTTGGGCTCCGGCCCCGCGGCCACCAACAAACGCCACAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470019.5
ENST00000497957.1
CDS-3UTR CCA 90 bp TCTGTGAGGGCTGTCACTATTTCCTCTGGAGCACCCACCCTAACCCCTGTGCCTCGCCGCTCCGTGTCCTaGACAGGGGCCCCATCGAGC +
Preference number: 4 (lower is better)
Translates to: SVRAVTISSGAPTLTPVPRRSVS*TGAPSS
Trigger: GCTCGATGGGGCCCCTGTCCAGGACACGGAGCGGCG...AGGCACAGGGGTTAGGGTGGGTGCTCCAGAGGAAATAGTGACAGCCCTCACAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000471863.5
CDS-3UTR CCA 90 bp AGGTCAAGTCTGACACTTGGCCAAGGGCTCGGCCGCCCTTTCCATTTGCACAAGCGCCGCTCCGTGTCCTaGACAGGGGCCCCATCGAGC +
Preference number: 4 (lower is better)
Translates to: RSSLTLGQGLGRPFHLHKRRSVS*TGAPSS
Trigger: GCTCGATGGGGCCCCTGTCCAGGACACGGAGCGGCG...CTTGTGCAAATGGAAAGGGCGGCCGAGCCCTTGGCCAAGTGTCAGACTTGACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476760.1
CDS-3UTR CCA 90 bp GTGGGGAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTATGCTCAGGACCAGCTaGCCGGAGCGTCAGGTTCCG +
Preference number: 4 (lower is better)
Translates to: VGKTWVWVSVHKPRVGRTMLRTS*PERQVP
Trigger: CGGAACCTGACGCTCCGGCCAGCTGGTCCTGAGCAT...AGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTCCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
CDS-3UTR CCA 90 bp GTGGGGAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTGCTACTACCACGTCCTaGGGTGCCAGCACCACCCTG +
Preference number: 4 (lower is better)
Translates to: VGKTWVWVSVHKPRVGRTATTTS*GASTTL
Trigger: CAGGGTGGTGCTGGCACCCCAGGACGTGGTAGTAGC...AGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTCCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp TCCAGGATGGCCTCGGGGGACATCCAGCGCAGCGGCACCCAGGCCTGGCGGAAGGCTGAGAACTGGCAATaGAACATGGCCTCCTCATAC +
Preference number: 4 (lower is better)
Translates to: SRMASGDIQRSGTQAWRKAENWQ*NMASSY
Trigger: GTATGAGGAGGCCATGTTCCATTGCCAGTTCTCAGC...CTTCCGCCAGGCCTGGGTGCCGCTGCGCTGGATGTCCCCCGAGGCCATCCTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR CCA 90 bp GGAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTGGCTCTGCGGAGGTGTaGGGGGCGACTGCGGTTAGT +
Preference number: 4 (lower is better)
Translates to: GRRGSGSVCTSPEWGGLTGSAEV*GATAVS
Trigger: ACTAACCGCAGTCGCCCCCCACACCTCCGCAGAGCC...AGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp AGCCTAGCCCTCCCCAGGCAAAGTTGGCAGATGAGTGGCAGAGTTGGACCCGGTGGCTCTGCGGAGGTGTaGGGGGCGACTGCGGTTAGT +
Preference number: 4 (lower is better)
Translates to: SLALPRQSWQMSGRVGPGGSAEV*GATAVS
Trigger: ACTAACCGCAGTCGCCCCCCACACCTCCGCAGAGCC...ACCGGGTCCAACTCTGCCACTCATCTGCCAACTTTGCCTGGGGAGGGCTAGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp TTCTGCAAAGGCCCACCGTTGAGGCATTCCATCTCTGGCTCCTCGCCCTCGGGCGCTGACCAGCCAGGTTaGCCGCGTGGCAGGTGTAGA +
Preference number: 4 (lower is better)
Translates to: FCKGPPLRHSISGSSPSGADQPG*PRGRCR
Trigger: TCTACACCTGCCACGCGGCCAACCTGGCTGGTCAGC...GCCCGAGGGCGAGGAGCCAGAGATGGAATGCCTCAACGGTGGGCCTTTGCAGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR CCA 90 bp GTGGGGAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTACATGGGCACGAATCTaGCCCTGCGGCCCGTTGGAG +
Preference number: 4 (lower is better)
Translates to: VGKTWVWVSVHKPRVGRTTWARI*PCGPLE
Trigger: CTCCAACGGGCCGCAGGGCCAGATTCGTGCCCATGT...AGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTCCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp TGTGCTGTGGCGTTTGTTGGTGGCCGCGGGGCCGGAGCCCAAGCTGGTCAAGGCACTGCCACAGTGAGCTaGACATGGGCACGAATCTGG +
Preference number: 4 (lower is better)
Translates to: CAVAFVGGRGAGAQAGQGTATVS*TWARIW
Trigger: CCAGATTCGTGCCCATGTCCAGCTCACTGTGGCAGT...GCCTTGACCAGCTTGGGCTCCGGCCCCGCGGCCACCAACAAACGCCACAGCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR CCA 90 bp GGAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTACTGAATCAGCGGCTTaGGGTCCCCCTGGGCCTCGC +
Preference number: 4 (lower is better)
Translates to: GRRGSGSVCTSPEWGGLTTESAA*GPPGPR
Trigger: GCGAGGCCCAGGGGGACCCCAAGCCGCTGATTCAGT...AGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp CCAAACTCACTCTTCCCCAGCGTGGTGATGGGCTGCAGGCTAGACCGTGGGAAGACTGAATCAGCGGCTTaGGGTCCCCCTGGGCCTCGC +
Preference number: 4 (lower is better)
Translates to: PNSLFPSVVMGCRLDRGKTESAA*GPPGPR
Trigger: GCGAGGCCCAGGGGGACCCCAAGCCGCTGATTCAGT...CTTCCCACGGTCTAGCCTGCAGCCCATCACCACGCTGGGGAAGAGTGAGTTTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR CCA 90 bp GCAGCGCTGCATCAGCCGATAGAGTTTGGAAGGGCAGCCCTCGGGCTGAGGAAGTGGGTCCCAGCTTGGTaGGGTCCAGGATGCGGTCCT +
Preference number: 4 (lower is better)
Translates to: AALHQPIEFGRAALGLRKWVPAW*GPGCGP
Trigger: AGGACCGCATCCTGGACCCCACCAAGCTGGGACCCA...CTTCCTCAGCCCGAGGGCTGCCCTTCCAAACTCTATCGGCTGATGCAGCGCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR CCA 90 bp CCTGCTCAGACCTCAGCAATGCCTGTTGCACTAGGGCAGGGGCCTCAGGGCCCAATGCCCAGGGCTACCTaGGTGCATAGGGCCACCTTC +
Preference number: 4 (lower is better)
Translates to: PAQTSAMPVALGQGPQGPMPRAT*VHRATF
Trigger: GAAGGTGGCCCTATGCACCCAGGTAGCCCTGGGCAT...TGGGCCCTGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAGGTCTGAGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp TGCTCAGACCTCAGCAATGCCTGTTGCACTAGGGCAGGGGCCTCAGGGCCCAGGATGCCCAGGGCTACCTaGGTGCATAGGGCCACCTTC +
Preference number: 4 (lower is better)
Translates to: CSDLSNACCTRAGASGPRMPRAT*VHRATF
Trigger: GAAGGTGGCCCTATGCACCCAGGTAGCCCTGGGCAT...CCTGGGCCCTGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAGGTCTGAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp GGGGGACATCCAGCGCAGCGGCACCCAGGCCTGGCGGAAGTGGTAGTACTCACTTCAGCCGATAGAGTTTaGAAGGGCAGCCCTCGGGCT +
Preference number: 4 (lower is better)
Translates to: GGHPAQRHPGLAEVVVLTSADRV*KGSPRA
Trigger: AGCCCGAGGGCTGCCCTTCCAAACTCTATCGGCTGA...AGTGAGTACTACCACTTCCGCCAGGCCTGGGTGCCGCTGCGCTGGATGTCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
CDS-3UTR CCA 90 bp GTAGAGAAGTCACCCTCCAGGATGGCCTCGGGGGACATCCAGCGCAGCGGCACCGTGCCAGCACCACCCTaGCAAAGCTTTCATCGAGGG +
Preference number: 4 (lower is better)
Translates to: VEKSPSRMASGDIQRSGTVPAPP*QSFHRG
Trigger: CCCTCGATGAAAGCTTTGCCAGGGTGGTGCTGGCAC...GGTGCCGCTGCGCTGGATGTCCCCCGAGGCCATCCTGGAGGGTGACTTCTCTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR TCA 90 bp ATGCCCACCCACCCCACGCTGCAATTACATATAAAAGCCGCCCGTGGTGCATACCTCAGGAAAAGGAGCTaGGGGCGCACGGCGGGCGCG +
Preference number: 4 (lower is better)
Translates to: MPTHPTLQLHIKAARGAYLRKRS*GRTAGA
Trigger: CGCGCCCGCCGTGCGCCCTCAGCTCCTTTTCCTGAG...GTATGCACCACGGGCGGCTTTTATATGTAATTGCAGCGTGGGGTGGGTGGGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR TCA 90 bp TGTGTCCTCTATAATCCTGGTCTAGACCCCCAAGTGGGACCAGTGGGCCAAGAGGCAGCAGCAGGACGCTaGGCAGAGGCAACCGGCGGG +
Preference number: 4 (lower is better)
Translates to: CVLYNPGLDPQVGPVGQEAAAGR*AEATGG
Trigger: CCCGCCGGTTGCCTCTGCTCAGCGTCCTGCTGCTGC...CTCTTGGCCCACTGGTCCCACTTGGGGGTCTAGACCAGGATTATAGAGGACACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR TCA 90 bp GAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCGCAGCAGCAGGACGCTaGGCAGAGGCAACCGGCGGG +
Preference number: 4 (lower is better)
Translates to: EDRDLAHHAVSFPLEMSSAAAGR*AEATGG
Trigger: CCCGCCGGTTGCCTCTGCTCAGCGTCCTGCTGCTGC...GGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR TCA 90 bp CCTGCTCAGACCTCAGCAATGCCTGTTGCACTAGGGCAGGGGCCTCAGGGCCCATGTGGCAACGAAGTGTaGCCTGGGTCTGTGGCTGGA +
Preference number: 4 (lower is better)
Translates to: PAQTSAMPVALGQGPQGPCGNEV*PGSVAG
Trigger: TCCAGCCACAGACCCAGGTCACACTTCGTTGCCACA...TGGGCCCTGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAGGTCTGAGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR TCA 90 bp TGCTCAGACCTCAGCAATGCCTGTTGCACTAGGGCAGGGGCCTCAGGGCCCAGGTCCGCTCCTTGCTGCTaGCTGTGTGGTTGCTCTGAC +
Preference number: 4 (lower is better)
Translates to: CSDLSNACCTRAGASGPRSAPCC*LCGCSD
Trigger: GTCAGAGCAACCACACAGTCAGCAGCAAGGAGCGGA...CCTGGGCCCTGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAGGTCTGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
CDS-3UTR TCA 90 bp CCTGCTCAGACCTCAGCAATGCCTGTTGCACTAGGGCAGGGGCCTCAGGGCCCATCCGCTCCTTGCTGCTaGCTGTGTGGTTGCTCTGAC +
Preference number: 4 (lower is better)
Translates to: PAQTSAMPVALGQGPQGPSAPCC*LCGCSD
Trigger: GTCAGAGCAACCACACAGTCAGCAGCAAGGAGCGGA...TGGGCCCTGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAGGTCTGAGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
CDS-3UTR TCA 90 bp GGCAGGGAAAACTGCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTCGGCCCAGCACGGCAATaGTGTAGGCCACAGCGGCAC +
Preference number: 4 (lower is better)
Translates to: GRENCPAQSPSRPVWVQVGPARQ*CRPQRH
Trigger: GTGCCGCTGTGGCCTACATCATTGCCGTGCTGGGCC...GACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR TCA 90 bp GCCGCGGGGCCGGAGCCCAAGCTGGTCAAGGCCACTTCTTCTTGGATCTCTGCTGCAAAGGCCCACCGTTaGGGCATTCCATCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: AAGPEPKLVKATSSWISAAKAHR*GIPSLA
Trigger: AGCCAGAGATGGAATGCCTCAACGGTGGGCCTTTGC...AGCAGAGATCCAAGAAGAAGTGGCCTTGACCAGCTTGGGCTCCGGCCCCGCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
CDS-3UTR TCA 90 bp CTTGTGCTGTGGCGTTTGTTGGTGGCCGCGGGGCCGGAGCCCAAGCTGGTCAAGTTCTTGGATCTCTGCTaGGGGCTGCCCGTTCTGCAA +
Preference number: 4 (lower is better)
Translates to: LVLWRLLVAAGPEPKLVKFLDLC*GLPVLQ
Trigger: TTGCAGAACGGGCAGCCCTCAGCAGAGATCCAAGAA...CTTGACCAGCTTGGGCTCCGGCCCCGCGGCCACCAACAAACGCCACAGCACAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
CDS-3UTR TCA 90 bp GCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTCAGCCTCCCAAAGGCGCTGGCAATCTCACTaGAGGAGGGCCGGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: AQLKALVAQFGSKSASQRRWQSH*RRAGPW
Trigger: CCAAGGACCGGCCCTCCTTCAGTGAGATTGCCAGCG...CCTTTGGGAGGCTGACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR TCA 90 bp TGTGTCCTCTATAATCCTGGTCTAGACCCCCAAGTGGGACCAGTGGGCCAAGAGCTGCCCAGGCCATCCTaGGCGGGCTCCCTCCTCACG +
Preference number: 4 (lower is better)
Translates to: CVLYNPGLDPQVGPVGQELPRPS*AGSLLT
Trigger: CGTGAGGAGGGAGCCCGCTCAGGATGGCCTGGGCAG...CTCTTGGCCCACTGGTCCCACTTGGGGGTCTAGACCAGGATTATAGAGGACACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR TCA 90 bp ATCTTATCACTTGTGCTGTGGCGTTTGTTGGTGGCCGCGGGGCCGGAGCCCAAGTGTGCAGCAGCATGGTaGGACGGCCGAATCCCCACC +
Preference number: 4 (lower is better)
Translates to: ILSLVLWRLLVAAGPEPKCAAAW*DGRIPT
Trigger: GGTGGGGATTCGGCCGTCTCACCATGCTGCTGCACA...CTTGGGCTCCGGCCCCGCGGCCACCAACAAACGCCACAGCACAAGTGATAAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461100.5
ENST00000494146.5
ENST00000497957.1
CDS-3UTR GCA 90 bp GGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCAGCGCCCGGCGCCCCTaGAGTGCATCCTGGGAGGAC +
Preference number: 4 (lower is better)
Translates to: GGQGSCPSCCELPSRDVLSARRP*SASWED
Trigger: GTCCTCCCAGGATGCACTGCAGGGGCGCCGGGCGCT...GAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR GCA 90 bp GGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTCCTCTATAAGCGCCCGGCGCCCCTaGAGTGCATCCTGGGAGGAC +
Preference number: 4 (lower is better)
Translates to: GQCAQAQSGEDSLAVSSISARRP*SASWED
Trigger: GTCCTCCCAGGATGCACTGCAGGGGCGCCGGGCGCT...TATAGAGGACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp ATGCCCACCCACCCCACGCTGCAATTACATATAAAAGCCGCCCGTGGTGCATACAGCGCCCGGCGCCCCTaGAGTGCATCCTGGGAGGAC +
Preference number: 4 (lower is better)
Translates to: MPTHPTLQLHIKAARGAYSARRP*SASWED
Trigger: GTCCTCCCAGGATGCACTGCAGGGGCGCCGGGCGCT...GTATGCACCACGGGCGGCTTTTATATGTAATTGCAGCGTGGGGTGGGTGGGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp CACCCAGGCCTGGCGGAAGTGGTAGTACTCACTGTTGTACACATCCTTGCTGAGAGCGCCCGGCGCCCCTaGAGTGCATCCTGGGAGGAC +
Preference number: 4 (lower is better)
Translates to: HPGLAEVVVLTVVHILAESARRP*SASWED
Trigger: GTCCTCCCAGGATGCACTGCAGGGGCGCCGGGCGCT...CTCAGCAAGGATGTGTACAACAGTGAGTACTACCACTTCCGCCAGGCCTGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR GCA 90 bp AGCCTAGCCCTCCCCAGGCAAAGTTGGCAGATGAGTGGCAGAGTTGGACCCGGTCAAAGCTCAGGCTGCTaGCCTGGGCGAAACGCCGCT +
Preference number: 4 (lower is better)
Translates to: SLALPRQSWQMSGRVGPGQSSGC*PGRNAA
Trigger: AGCGGCGTTTCGCCCAGGGCAGCAGCCTGAGCTTTG...ACCGGGTCCAACTCTGCCACTCATCTGCCAACTTTGCCTGGGGAGGGCTAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp ATCTTATCACTTGTGCTGTGGCGTTTGTTGGTGGCCGCGGGGCCGGAGCCCAAGCAAAGCTCAGGCTGCTaGCCTGGGCGAAACGCCGCT +
Preference number: 4 (lower is better)
Translates to: ILSLVLWRLLVAAGPEPKQSSGC*PGRNAA
Trigger: AGCGGCGTTTCGCCCAGGGCAGCAGCCTGAGCTTTG...CTTGGGCTCCGGCCCCGCGGCCACCAACAAACGCCACAGCACAAGTGATAAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR GCA 90 bp GGAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTCAGCCGGTCCACAGCTaGAAAGCTCAGGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: GRRGSGSVCTSPEWGGLTQPVHS*KAQAAA
Trigger: GGCAGCAGCCTGAGCTTTGCAGCTGTGGACCGGCTG...AGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp CTGCCACTCCCTCCTCCAAGCCCTGAGCCTTTGCCAGGAACACCTCCCCAAACTTCCTCAAAGAGCCACTaGAGGCTCGGGGGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: LPLPPPSPEPLPGTPPQTSSKSH*RLGGGW
Trigger: CCAGCCACCCCCGAGCCTGCAGTGGCTCTTTGAGGA...AGTTTGGGGAGGTGTTCCTGGCAAAGGCTCAGGGCTTGGAGGAGGGAGTGGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR GCA 90 bp CAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCAGCCGGACTCCCGCGTaGTCCCACCACACGCTGGGC +
Preference number: 4 (lower is better)
Translates to: QEDRDLAHHAVSFPLEMSSRTPA*SHHTLG
Trigger: GCCCAGCGTGTGGTGGGAGCACGCGGGAGTCCGGCT...GGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR GCA 90 bp GCGGGGCCGGAGCCCAAGCTGGTCAAGGCCACTTCTTCTTGGATCTCTGCTGAGCCAAGTAGCCGGGTTTaGCCTCCTCCAGCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: AGPEPKLVKATSSWISAEPSSRV*PPPAGC
Trigger: ACAGCCAGCTGGAGGAGGGCAAACCCGGCTACTTGG...CTCAGCAGAGATCCAAGAAGAAGTGGCCTTGACCAGCTTGGGCTCCGGCCCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR GCA 90 bp CCTGCTCAGACCTCAGCAATGCCTGTTGCACTAGGGCAGGGGCCTCAGGGCCCATGCCGGCTGGGGTGCTaGTCATACAACGGTACCATG +
Preference number: 4 (lower is better)
Translates to: PAQTSAMPVALGQGPQGPCRLGC*SYNGTM
Trigger: CATGGTACCGTTGTATGAGCAGCACCCCAGCCGGCA...TGGGCCCTGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAGGTCTGAGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp ACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGGCACGAATCTGGCCCTaGGGCCCGTTGGAGGCAATG +
Preference number: 4 (lower is better)
Translates to: TWVWVSVHKPRVGRTHLLARIWP*GPLEAM
Trigger: CATTGCCTCCAACGGGCCGCAGGGCCAGATTCGTGC...CAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp AGCCTAGCCCTCCCCAGGCAAAGTTGGCAGATGAGTGGCAGAGTTGGACCCGGTCCCTCGGGCTGCTTCTaGAGCCGCTTGGCTTTGCAG +
Preference number: 4 (lower is better)
Translates to: SLALPRQSWQMSGRVGPGPSGCF*SRLALQ
Trigger: CTGCAAAGCCAAGCGGCTGCAGAAGCAGCCCGAGGG...ACCGGGTCCAACTCTGCCACTCATCTGCCAACTTTGCCTGGGGAGGGCTAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp ATCTCTGCTGAGGGCTGCCCGTTCTGCAAAGGCCCACCGTTGAGGCATTCCATCTCCTCGCCCTCGGGCTaGTTCTGCAGCCGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: ISAEGCPFCKGPPLRHSISSPSG*FCSRLA
Trigger: AGCCAAGCGGCTGCAGAAGCAGCCCGAGGGCGAGGA...GATGGAATGCCTCAACGGTGGGCCTTTGCAGAACGGGCAGCCCTCAGCAGAGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
CDS-3UTR GCA 90 bp TGCTCAGACCTCAGCAATGCCTGTTGCACTAGGGCAGGGGCCTCAGGGCCCAGGATCTCTGCTGAGGGCTaGCCGTTCTGCAAAGGCCCA +
Preference number: 4 (lower is better)
Translates to: CSDLSNACCTRAGASGPRISAEG*PFCKGP
Trigger: TGGGCCTTTGCAGAACGGGCAGCCCTCAGCAGAGAT...CCTGGGCCCTGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAGGTCTGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
CDS-3UTR GCA 90 bp ATCACTTGTGCTGTGGCGTTTGTTGGTGGCCGCGGGGCCGGAGCCCAAGCTGGTATCTCTGCTGAGGGCTaGCCGTTCTGCAAAGGCCCA +
Preference number: 4 (lower is better)
Translates to: ITCAVAFVGGRGAGAQAGISAEG*PFCKGP
Trigger: TGGGCCTTTGCAGAACGGGCAGCCCTCAGCAGAGAT...ACCAGCTTGGGCTCCGGCCCCGCGGCCACCAACAAACGCCACAGCACAAGTGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
CDS-3UTR GCA 90 bp TATCACTTGTGCTGTGGCGTTTGTTGGTGGCCGCGGGGCCGGAGCCCAAGCTGGATCTCTGCTGAGGGCTaGCCGTTCTGCAAAGGCCCA +
Preference number: 4 (lower is better)
Translates to: YHLCCGVCWWPRGRSPSWISAEG*PFCKGP
Trigger: TGGGCCTTTGCAGAACGGGCAGCCCTCAGCAGAGAT...CCAGCTTGGGCTCCGGCCCCGCGGCCACCAACAAACGCCACAGCACAAGTGATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
CDS-3UTR GCA 90 bp GTGGGGAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTAGCGTGGTGATGGGCTaGAGGCTAGACCGTGGGAAG +
Preference number: 4 (lower is better)
Translates to: VGKTWVWVSVHKPRVGRTSVVMG*RLDRGK
Trigger: CTTCCCACGGTCTAGCCTGCAGCCCATCACCACGCT...AGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTCCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp CTTATCACTTGTGCTGTGGCGTTTGTTGGTGGCCGCGGGGCCGGAGCCCAAGCTAGCGTGGTGATGGGCTaGAGGCTAGACCGTGGGAAG +
Preference number: 4 (lower is better)
Translates to: LITCAVAFVGGRGAGAQASVVMG*RLDRGK
Trigger: CTTCCCACGGTCTAGCCTGCAGCCCATCACCACGCT...AGCTTGGGCTCCGGCCCCGCGGCCACCAACAAACGCCACAGCACAAGTGATAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
CDS-3UTR GCA 90 bp GCCATCCTGAGCGGGCTCCCTCCTCACGGCTTGCTGTCCACGGTGCTGTCTCCCGAAATCCTCAGGAACTaGTTGAGGTCTCCCCAGCGT +
Preference number: 4 (lower is better)
Translates to: AILSGLPPHGLLSTVLSPEILRN*LRSPQR
Trigger: ACGCTGGGGAGACCTCAAGCAGTTCCTGAGGATTTC...GGGAGACAGCACCGTGGACAGCAAGCCGTGAGGAGGGAGCCCGCTCAGGATGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000461389.1
CDS-3UTR GCA 90 bp AGGCCCTGCTCAGACCTCAGCAATGCCTGTTGCACTAGGGCAGGGGCCTCAGGGCATAGGGCCACCTTCTaGTTGGTGCTGAGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: RPCSDLSNACCTRAGASGHRATF*LVLRGC
Trigger: ACAGCCCCTCAGCACCAAGCAGAAGGTGGCCCTATG...CCCTGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAGGTCTGAGCAGGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp GCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTCAGCCTCCCAAAGGTGGACAGGTGCTCCATaGCCAGGGCTACCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: AQLKALVAQFGSKSASQRWTGAP*PGLPGC
Trigger: GCACCCAGGTAGCCCTGGGCATGGAGCACCTGTCCA...CCTTTGGGAGGCTGACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp GGAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGGACAGGTGCTCCATaGCCAGGGCTACCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: GRRGSGSVCTSPEWGGLTWTGAP*PGLPGC
Trigger: GCACCCAGGTAGCCCTGGGCATGGAGCACCTGTCCA...AGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp AGCCTAGCCCTCCCCAGGCAAAGTTGGCAGATGAGTGGCAGAGTTGGACCCGGTTGGACAGGTGCTCCATaGCCAGGGCTACCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: SLALPRQSWQMSGRVGPGWTGAP*PGLPGC
Trigger: GCACCCAGGTAGCCCTGGGCATGGAGCACCTGTCCA...ACCGGGTCCAACTCTGCCACTCATCTGCCAACTTTGCCTGGGGAGGGCTAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp GCCCAGGCCATCCTGAGCGGGCTCCCTCCTCACGGCTTGCTGTCCACGGTGCTGGCAGCCAAGTCCTTATaGACAAAGCGGTTGTTGGAC +
Preference number: 4 (lower is better)
Translates to: AQAILSGLPPHGLLSTVLAAKSL*TKRLLD
Trigger: GTCCAACAACCGCTTTGTGCATAAGGACTTGGCTGC...CAGCACCGTGGACAGCAAGCCGTGAGGAGGGAGCCCGCTCAGGATGGCCTGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
CDS-3UTR GCA 90 bp CCTGCTCAGACCTCAGCAATGCCTGTTGCACTAGGGCAGGGGCCTCAGGGCCCAAAGTACCAGGGTCTCTaGCACTCCCTCCTCCAAGCC +
Preference number: 4 (lower is better)
Translates to: PAQTSAMPVALGQGPQGPKYQGL*HSLLQA
Trigger: GGCTTGGAGGAGGGAGTGGCAGAGACCCTGGTACTT...TGGGCCCTGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAGGTCTGAGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp GGGAGGGCTGCCAGGGCCCTCCGACTCCTCCGGCACAGGCTTGTCGTTGGATGTCCGAATCCCCACCGCTaGCACAAAAATGGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: GRAARALRLLRHRLVVGCPNPHR*HKNGFC
Trigger: ACAGAAGCCATTTTTGTGGCAGCGGTGGGGATTCGG...ACATCCAACGACAAGCCTGTGCCGGAGGAGTCGGAGGGCCCTGGCAGCCCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497957.1
CDS-3UTR GCA 90 bp GCTGTGGCGTTTGTTGGTGGCCGCGGGGCCGGAGCCCAAGCTGGTCAAGGCCACAGCTTTCATCGAGGGTaGCCATCAATGTGGCAACGA +
Preference number: 4 (lower is better)
Translates to: AVAFVGGRGAGAQAGQGHSFHRG*PSMWQR
Trigger: TCGTTGCCACATTGATGGGCACCCTCGATGAAAGCT...GTGGCCTTGACCAGCTTGGGCTCCGGCCCCGCGGCCACCAACAAACGCCACAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR CCA 90 bp TGCTCCATGCCCAGGGCTACCTGGGTGCATAGGGCCACCTTCTGCTTGGTGCTGAAGACAATGGCTGTCTaGGTACCGCCCAGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: CSMPRATWVHRATFCLVLKTMAV*VPPSSG
Trigger: GCCGCTGCTGGGCGGTACCCAGACAGCCATTGTCTT...CAGCACCAAGCAGAAGGTGGCCCTATGCACCCAGGTAGCCCTGGGCATGGAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR CCA 90 bp GAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCGCCGCTCCGTGTCCTaGACAGGGGCCCCATCGAGC +
Preference number: 4 (lower is better)
Translates to: EDRDLAHHAVSFPLEMSSRRSVS*TGAPSS
Trigger: GCTCGATGGGGCCCCTGTCCAGGACACGGAGCGGCG...GGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CCA 90 bp GGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCGCCGCTCCGTGTCCTaGACAGGGGCCCCATCGAGC +
Preference number: 4 (lower is better)
Translates to: GGQGSCPSCCELPSRDVLRRSVS*TGAPSS
Trigger: GCTCGATGGGGCCCCTGTCCAGGACACGGAGCGGCG...GAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CCA 90 bp GGCCCACCGTTGAGGCATTCCATCTCTGGCTCCTCGCCCTCGGGCTGCTTCTGCTGTGACCTGGGTCTGTaGCTGGATCTCAGCTTCCGA +
Preference number: 4 (lower is better)
Translates to: GPPLRHSISGSSPSGCFCCDLGL*LDLSFR
Trigger: TCGGAAGCTGAGATCCAGCCACAGACCCAGGTCACA...GCAGAAGCAGCCCGAGGGCGAGGAGCCAGAGATGGAATGCCTCAACGGTGGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR CCA 90 bp GGAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTATGCTCAGGACCAGCTaGCCGGAGCGTCAGGTTCCG +
Preference number: 4 (lower is better)
Translates to: GRRGSGSVCTSPEWGGLTMLRTS*PERQVP
Trigger: CGGAACCTGACGCTCCGGCCAGCTGGTCCTGAGCAT...AGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
CDS-3UTR CCA 90 bp AGCCTAGCCCTCCCCAGGCAAAGTTGGCAGATGAGTGGCAGAGTTGGACCCGGTATGCTCAGGACCAGCTaGCCGGAGCGTCAGGTTCCG +
Preference number: 4 (lower is better)
Translates to: SLALPRQSWQMSGRVGPGMLRTS*PERQVP
Trigger: CGGAACCTGACGCTCCGGCCAGCTGGTCCTGAGCAT...ACCGGGTCCAACTCTGCCACTCATCTGCCAACTTTGCCTGGGGAGGGCTAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
CDS-3UTR CCA 90 bp GGAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTAGGCTCGGGGGTGGCTaGGCTGAGAACTGGCAATGG +
Preference number: 4 (lower is better)
Translates to: GRRGSGSVCTSPEWGGLTRLGGG*AENWQW
Trigger: CCATTGCCAGTTCTCAGCCCAGCCACCCCCGAGCCT...AGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp AGCCTAGCCCTCCCCAGGCAAAGTTGGCAGATGAGTGGCAGAGTTGGACCCGGTGCTCTGGCAGACCCTTaGGGGGAAGGCAGGTCACAC +
Preference number: 4 (lower is better)
Translates to: SLALPRQSWQMSGRVGPGALADP*GEGRSH
Trigger: GTGTGACCTGCCTTCCCCCCAAGGGTCTGCCAGAGC...ACCGGGTCCAACTCTGCCACTCATCTGCCAACTTTGCCTGGGGAGGGCTAGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp GGCAGGGAAAACTGCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTCGCTCCCACCACACGCTaGGCTCTGGCAGACCCTTGG +
Preference number: 4 (lower is better)
Translates to: GRENCPAQSPSRPVWVQVAPTTR*ALADPW
Trigger: CCAAGGGTCTGCCAGAGCCCAGCGTGTGGTGGGAGC...GACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp GGTGGCAGGGAAAACTGCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGCTCCCACCACACGCTaGGCTCTGGCAGACCCTTGG +
Preference number: 4 (lower is better)
Translates to: GGRENCPAQSPSRPVWVQAPTTR*ALADPW
Trigger: CCAAGGGTCTGCCAGAGCCCAGCGTGTGGTGGGAGC...TTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp GCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTCAGCCTCCCAAAGGGCTGACCAGCCAGGTTaGCCGCGTGGCAGGTGTAGA +
Preference number: 4 (lower is better)
Translates to: AQLKALVAQFGSKSASQRADQPG*PRGRCR
Trigger: TCTACACCTGCCACGCGGCCAACCTGGCTGGTCAGC...CCTTTGGGAGGCTGACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp AGCCTAGCCCTCCCCAGGCAAAGTTGGCAGATGAGTGGCAGAGTTGGACCCGGTGCTGACCAGCCAGGTTaGCCGCGTGGCAGGTGTAGA +
Preference number: 4 (lower is better)
Translates to: SLALPRQSWQMSGRVGPGADQPG*PRGRCR
Trigger: TCTACACCTGCCACGCGGCCAACCTGGCTGGTCAGC...ACCGGGTCCAACTCTGCCACTCATCTGCCAACTTTGCCTGGGGAGGGCTAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp CCTGCTCAGACCTCAGCAATGCCTGTTGCACTAGGGCAGGGGCCTCAGGGCCCATCCAGCTGGCTGTCTTaGGGCTTCTTCAGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: PAQTSAMPVALGQGPQGPSSWLS*GFFSQE
Trigger: CTCCTGGCTGAAGAAGCCCCAAGACAGCCAGCTGGA...TGGGCCCTGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAGGTCTGAGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp GCAGCGCTGCATCAGCCGATAGAGTTTGGAAGGGCAGCCCTCGGGCTGAGGAAGCTCGATGCTGCCGGCTaGGGTGCTGCTCATACAACG +
Preference number: 4 (lower is better)
Translates to: AALHQPIEFGRAALGLRKLDAAG*GAAHTT
Trigger: CGTTGTATGAGCAGCACCCCAGCCGGCAGCATCGAG...CTTCCTCAGCCCGAGGGCTGCCCTTCCAAACTCTATCGGCTGATGCAGCGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR CCA 90 bp CCTGCTCAGACCTCAGCAATGCCTGTTGCACTAGGGCAGGGGCCTCAGGGCCCAACAGTGAGCTGGACATaGGCACGAATCTGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: PAQTSAMPVALGQGPQGPTVSWT*ARIWPC
Trigger: GCAGGGCCAGATTCGTGCCCATGTCCAGCTCACTGT...TGGGCCCTGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAGGTCTGAGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp AGGCCCTGCTCAGACCTCAGCAATGCCTGTTGCACTAGGGCAGGGGCCTCAGGGACAGTGAGCTGGACATaGGCACGAATCTGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: RPCSDLSNACCTRAGASGTVSWT*ARIWPC
Trigger: GCAGGGCCAGATTCGTGCCCATGTCCAGCTCACTGT...CCCTGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAGGTCTGAGCAGGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp GAGGTGGCAGGGAAAACTGCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCTCCTGGGTCCCAGCTTaGTGGGGTCCAGGATGCGGT +
Preference number: 4 (lower is better)
Translates to: EVAGKTAQLKALVAQFGSSWVPA*WGPGCG
Trigger: ACCGCATCCTGGACCCCACCAAGCTGGGACCCAGGA...GGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCCACCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000470019.5
CDS-3UTR CCA 90 bp TATCACTTGTGCTGTGGCGTTTGTTGGTGGCCGCGGGGCCGGAGCCCAAGCTGGGGAAGATGTGCATCCTaGGTCCCAGCTTGGTGGGGT +
Preference number: 4 (lower is better)
Translates to: YHLCCGVCWWPRGRSPSWGRCAS*VPAWWG
Trigger: ACCCCACCAAGCTGGGACCCAGGATGCACATCTTCC...CCAGCTTGGGCTCCGGCCCCGCGGCCACCAACAAACGCCACAGCACAAGTGATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR CCA 90 bp AGGCCCTGCTCAGACCTCAGCAATGCCTGTTGCACTAGGGCAGGGGCCTCAGGGGCTTCTGCAGCCGCTTaGCTTTGCAGCGCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: RPCSDLSNACCTRAGASGASAAA*LCSASC
Trigger: GCAAGAAGCGCTGCAAAGCCAAGCGGCTGCAGAAGC...CCCTGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAGGTCTGAGCAGGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp CCTGCTCAGACCTCAGCAATGCCTGTTGCACTAGGGCAGGGGCCTCAGGGCCCAGCTTCTGCAGCCGCTTaGCTTTGCAGCGCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: PAQTSAMPVALGQGPQGPASAAA*LCSASC
Trigger: GCAAGAAGCGCTGCAAAGCCAAGCGGCTGCAGAAGC...TGGGCCCTGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAGGTCTGAGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp GTTGGTGGCCGCGGGGCCGGAGCCCAAGCTGGTCAAGGCCACTTCTTCTTGGATGCTTCTGCAGCCGCTTaGCTTTGCAGCGCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: VGGRGAGAQAGQGHFFLDASAAA*LCSASC
Trigger: GCAAGAAGCGCTGCAAAGCCAAGCGGCTGCAGAAGC...ATCCAAGAAGAAGTGGCCTTGACCAGCTTGGGCTCCGGCCCCGCGGCCACCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
CDS-3UTR CCA 90 bp TGTAGGCCACAGCGGCACCCACCGACAACCCAATGGTCTGGATCATCTTGTAGGTGTGGCGTTTGTTGGTaGCCGCGGGGCCGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: CRPQRHPPTTQWSGSSCRCGVCW*PRGRSP
Trigger: TGGGCTCCGGCCCCGCGGCCACCAACAAACGCCACA...CCTACAAGATGATCCAGACCATTGGGTTGTCGGTGGGTGCCGCTGTGGCCTACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
CDS-3UTR CCA 90 bp GTCCTTATGCACAAAGCGGTTGTTGGACAGGTGCTCCATGCCCAGGGCTACCTGTGTGGCGTTTGTTGGTaGCCGCGGGGCCGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: VLMHKAVVGQVLHAQGYLCGVCW*PRGRSP
Trigger: TGGGCTCCGGCCCCGCGGCCACCAACAAACGCCACA...CAGGTAGCCCTGGGCATGGAGCACCTGTCCAACAACCGCTTTGTGCATAAGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
CDS-3UTR CCA 90 bp CAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCTGTGGCGTTTGTTGGTaGCCGCGGGGCCGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: QGSCPSCCELPSRDVLPCCGVCW*PRGRSP
Trigger: TGGGCTCCGGCCCCGCGGCCACCAACAAACGCCACA...GCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CCA 90 bp ACGCGCAGCCAAGTCCTTATGCACAAAGCGGTTGTTGGACAGGTGCTCCATGCCTGCTGTGGCGTTTGTTaGTGGCCGCGGGGCCGGAGC +
Preference number: 4 (lower is better)
Translates to: TRSQVLMHKAVVGQVLHACCGVC*WPRGRS
Trigger: GCTCCGGCCCCGCGGCCACCAACAAACGCCACAGCA...GGCATGGAGCACCTGTCCAACAACCGCTTTGTGCATAAGGACTTGGCTGCGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
CDS-3UTR CCA 90 bp CAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCTGCTGTGGCGTTTGTTaGTGGCCGCGGGGCCGGAGC +
Preference number: 4 (lower is better)
Translates to: QGSCPSCCELPSRDVLPCCCGVC*WPRGRS
Trigger: GCTCCGGCCCCGCGGCCACCAACAAACGCCACAGCA...GCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CCA 90 bp GCTGTGGCGTTTGTTGGTGGCCGCGGGGCCGGAGCCCAAGCTGGTCAAGGCCACCTGCAGGCTAGACCGTaGGAAGTGCATCTTATCACT +
Preference number: 4 (lower is better)
Translates to: AVAFVGGRGAGAQAGQGHLQARP*EVHLIT
Trigger: AGTGATAAGATGCACTTCCCACGGTCTAGCCTGCAG...GTGGCCTTGACCAGCTTGGGCTCCGGCCCCGCGGCCACCAACAAACGCCACAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
CDS-3UTR CCA 90 bp ACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGAGTCACCCTCCAGGATaGCCTCGGGGGACATCCAGC +
Preference number: 4 (lower is better)
Translates to: TWVWVSVHKPRVGRTHLLSHPPG*PRGTSS
Trigger: GCTGGATGTCCCCCGAGGCCATCCTGGAGGGTGACT...CAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp AGAGAAGTCACCCTCCAGGATGGCCTCGGGGGACATCCAGCGCAGCGGCACCCAGATGAGTGGCAGAGTTaGACCCGGTCAAGGGGAGAA +
Preference number: 4 (lower is better)
Translates to: REVTLQDGLGGHPAQRHPDEWQS*TRSRGE
Trigger: TTCTCCCCTTGACCGGGTCCAACTCTGCCACTCATC...TGGGTGCCGCTGCGCTGGATGTCCCCCGAGGCCATCCTGGAGGGTGACTTCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR CCA 90 bp GTGGGGAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTAGGGTGGGGAAGACGTaGGTCTGGGTCAGTGTGCAC +
Preference number: 4 (lower is better)
Translates to: VGKTWVWVSVHKPRVGRTRVGKT*VWVSVH
Trigger: GTGCACACTGACCCAGACCCACGTCTTCCCCACCCT...AGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTCCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp TGCATCTTATCACTTGTGCTGTGGCGTTTGTTGGTGGCCGCGGGGCCGGAGCCCGGAGCCGCACCACGTTaGCGTGGTTCAGCTTCCCAA +
Preference number: 4 (lower is better)
Translates to: CILSLVLWRLLVAAGPEPGAAPR*RGSASQ
Trigger: TTGGGAAGCTGAACCACGCCAACGTGGTGCGGCTCC...GGGCTCCGGCCCCGCGGCCACCAACAAACGCCACAGCACAAGTGATAAGATGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470019.5
ENST00000497957.1
CDS-3UTR CCA 90 bp GCGGGGCCGGAGCCCAAGCTGGTCAAGGCCACTTCTTCTTGGATCTCTGCTGAGGGAGCCGCACCACGTTaGCGTGGTTCAGCTTCCCAA +
Preference number: 4 (lower is better)
Translates to: AGPEPKLVKATSSWISAEGAAPR*RGSASQ
Trigger: TTGGGAAGCTGAACCACGCCAACGTGGTGCGGCTCC...CTCAGCAGAGATCCAAGAAGAAGTGGCCTTGACCAGCTTGGGCTCCGGCCCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470019.5
ENST00000497957.1
CDS-3UTR CCA 90 bp CCAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCGGCTGTCTGGGTACCTaGGCCGACCCTGCCGGGTGG +
Preference number: 4 (lower is better)
Translates to: PGGQGSCPSCCELPSRDVGCLGT*ADPAGW
Trigger: CCACCCGGCAGGGTCGGCCCAGGTACCCAGACAGCC...GACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481273.5
3UTR CAA 72 bp CGTGGGAAGTGCATCTTATCACTTGTGCTGTGGCGTTaGTTGGTGGCCGCGGGGCCGGAGCCCAAGCTGGTC +
Preference number: 4 (lower is better)
Translates to: RGKCILSLVLWR*LVAAGPEPKLV
Trigger: GACCAGCTTGGGCTCCGGCCCCGCGGCCACCAACAAACGCCACAGCACAAGTGATAAGATGCACTTCCCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
CDS-3UTR TCA 90 bp CTCATCCTTGCTCTGCAGGCTCTTCACAAGTACCAGGGTCTCTGCCACTCCCTCGTGTGGCTTCCAGGATaGTGGGTGGGCCCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: LILALQALHKYQGLCHSLVWLPG*WVGPSA
Trigger: GGCAGAGGGGCCCACCCATCATCCTGGAAGCCACAC...GAGGGAGTGGCAGAGACCCTGGTACTTGTGAAGAGCCTGCAGAGCAAGGATGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR TCA 90 bp GTCACTATTTCCTCTGGAGCACCCACCCTAACCCCTGTGCCTGGCTCTCTACTGGTGTGGCTTCCAGGATaGTGGGTGGGCCCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: VTISSGAPTLTPVPGSLLVWLPG*WVGPSA
Trigger: GGCAGAGGGGCCCACCCATCATCCTGGAAGCCACAC...CAGTAGAGAGCCAGGCACAGGGGTTAGGGTGGGTGCTCCAGAGGAAATAGTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471863.5
CDS-3UTR TCA 90 bp GTTTGTTGGTGGCCGCGGGGCCGGAGCCCAAGCTGGTCAAGGCCACTTCTTCTTTCCTTGCCTTTCCACTaGATCAGCGGCTTGGGGTCC +
Preference number: 4 (lower is better)
Translates to: VCWWPRGRSPSWSRPLLLSLPFH*ISGLGS
Trigger: GGACCCCAAGCCGCTGATTCAGTGGAAAGGCAAGGA...AAGAAGAAGTGGCCTTGACCAGCTTGGGCTCCGGCCCCGCGGCCACCAACAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR TCA 90 bp GCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTCAGCCTCCCAAAGGGGGCCTCCGTGTGCTTaGTGTTGCAGCTGTTGCCTG +
Preference number: 4 (lower is better)
Translates to: AQLKALVAQFGSKSASQRGPPCA*CCSCCL
Trigger: CAGGCAACAGCTGCAACATCAAGCACACGGAGGCCC...CCTTTGGGAGGCTGACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000470019.5
CDS-3UTR TCA 90 bp CTTATGCACAAAGCGGTTGTTGGACAGGTGCTCCATGCCCAGGGCTACCTGGGTGGCCCAGCACGGCAATaGTGTAGGCCACAGCGGCAC +
Preference number: 4 (lower is better)
Translates to: LMHKAVVGQVLHAQGYLGGPARQ*CRPQRH
Trigger: GTGCCGCTGTGGCCTACATCATTGCCGTGCTGGGCC...ACCCAGGTAGCCCTGGGCATGGAGCACCTGTCCAACAACCGCTTTGTGCATAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR TCA 90 bp AGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCCGGCCCAGCACGGCAATaGTGTAGGCCACAGCGGCAC +
Preference number: 4 (lower is better)
Translates to: RDLAHHAVSFPLEMSSPAGPARQ*CRPQRH
Trigger: GTGCCGCTGTGGCCTACATCATTGCCGTGCTGGGCC...GGCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR TCA 90 bp GACCGTGGGAAGTGCATCTTATCACTTGTGCTGTGGCGTTTGTTGGTGGCCGCGGGCCCAGCACGGCAATaGTGTAGGCCACAGCGGCAC +
Preference number: 4 (lower is better)
Translates to: DRGKCILSLVLWRLLVAAGPARQ*CRPQRH
Trigger: GTGCCGCTGTGGCCTACATCATTGCCGTGCTGGGCC...CGCGGCCACCAACAAACGCCACAGCACAAGTGATAAGATGCACTTCCCACGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
CDS-3UTR TCA 90 bp GTTTGTTGGTGGCCGCGGGGCCGGAGCCCAAGCTGGTCAAGGCCACTTCTTCTTGCAAAGGCCCACCGTTaGGGCATTCCATCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: VCWWPRGRSPSWSRPLLLAKAHR*GIPSLA
Trigger: AGCCAGAGATGGAATGCCTCAACGGTGGGCCTTTGC...AAGAAGAAGTGGCCTTGACCAGCTTGGGCTCCGGCCCCGCGGCCACCAACAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
CDS-3UTR TCA 90 bp ACGGTGCTGTCTCCCAGGGCGCTGGCAATCTCACTGAAGGAGGGCCGGTCCTTGTTCTTGGATCTCTGCTaGGGGCTGCCCGTTCTGCAA +
Preference number: 4 (lower is better)
Translates to: TVLSPRALAISLKEGRSLFLDLC*GLPVLQ
Trigger: TTGCAGAACGGGCAGCCCTCAGCAGAGATCCAAGAA...CAAGGACCGGCCCTCCTTCAGTGAGATTGCCAGCGCCCTGGGAGACAGCACCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
CDS-3UTR TCA 90 bp CCTGCTCAGACCTCAGCAATGCCTGTTGCACTAGGGCAGGGGCCTCAGGGCCCATTCTTGGATCTCTGCTaGGGGCTGCCCGTTCTGCAA +
Preference number: 4 (lower is better)
Translates to: PAQTSAMPVALGQGPQGPFLDLC*GLPVLQ
Trigger: TTGCAGAACGGGCAGCCCTCAGCAGAGATCCAAGAA...TGGGCCCTGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAGGTCTGAGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
CDS-3UTR TCA 90 bp ATCACTTGTGCTGTGGCGTTTGTTGGTGGCCGCGGGGCCGGAGCCCAAGCTGGTTTCTTGGATCTCTGCTaGGGGCTGCCCGTTCTGCAA +
Preference number: 4 (lower is better)
Translates to: ITCAVAFVGGRGAGAQAGFLDLC*GLPVLQ
Trigger: TTGCAGAACGGGCAGCCCTCAGCAGAGATCCAAGAA...ACCAGCTTGGGCTCCGGCCCCGCGGCCACCAACAAACGCCACAGCACAAGTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
CDS-3UTR TCA 90 bp TCCCCTGCCCAGGCCATCCTGAGCGGGCTCCCTCCTCACGGCTTGCTGTCCACGGGTGCTGAGGGGCTGTaGCTTCAATTTTTCATCCTT +
Preference number: 4 (lower is better)
Translates to: SPAQAILSGLPPHGLLSTGAEGL*LQFFIL
Trigger: AAGGATGAAAAATTGAAGTCACAGCCCCTCAGCACC...CGTGGACAGCAAGCCGTGAGGAGGGAGCCCGCTCAGGATGGCCTGGGCAGGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
CDS-3UTR TCA 90 bp GGTGGCAGGGAAAACTGCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAACGCTGGCAATCTCACTaGAGGAGGGCCGGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: GGRENCPAQSPSRPVWVQRWQSH*RRAGPW
Trigger: CCAAGGACCGGCCCTCCTTCAGTGAGATTGCCAGCG...TTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR TCA 90 bp GGCAGGGAAAACTGCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTCCCCTCCTCCAAGCCCTaGGCCTTTGCCAGGAACACC +
Preference number: 4 (lower is better)
Translates to: GRENCPAQSPSRPVWVQVPSSKP*AFARNT
Trigger: GGTGTTCCTGGCAAAGGCTCAGGGCTTGGAGGAGGG...GACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR TCA 90 bp GTTTGTTGGTGGCCGCGGGGCCGGAGCCCAAGCTGGTCAAGGCCACTTCTTCTTACGACAGCCCGGCTCTaGGCAAGGACTCTAAGACTG +
Preference number: 4 (lower is better)
Translates to: VCWWPRGRSPSWSRPLLLTTARL*ARTLRL
Trigger: CAGTCTTAGAGTCCTTGCTCAGAGCCGGGCTGTCGT...AAGAAGAAGTGGCCTTGACCAGCTTGGGCTCCGGCCCCGCGGCCACCAACAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461100.5
ENST00000494146.5
ENST00000497957.1
CDS-3UTR GCA 90 bp CCAGAAATTGGGGTTACCTGTGGCACCCACACTGTCCCTGATAGAGGAAGAGGTAGCGCCCGGCGCCCCTaGAGTGCATCCTGGGAGGAC +
Preference number: 4 (lower is better)
Translates to: PEIGVTCGTHTVPDRGRGSARRP*SASWED
Trigger: GTCCTCCCAGGATGCACTGCAGGGGCGCCGGGCGCT...ACCTCTTCCTCTATCAGGGACAGTGTGGGTGCCACAGGTAACCCCAATTTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp GGCAGGGAAAACTGCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTCCTGCAAAGCTCAGGCTaGTGCCCTGGGCGAAACGCC +
Preference number: 4 (lower is better)
Translates to: GRENCPAQSPSRPVWVQVLQSSG*CPGRNA
Trigger: GGCGTTTCGCCCAGGGCAGCAGCCTGAGCTTTGCAG...GACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp ACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGAAGGTGCCAGAGTCCTaGAGCCGGTCCACAGCTGCA +
Preference number: 4 (lower is better)
Translates to: TWVWVSVHKPRVGRTHLLKVPES*SRSTAA
Trigger: TGCAGCTGTGGACCGGCTGCAGGACTCTGGCACCTT...CAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp GAGGTGGCAGGGAAAACTGCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGGTGCCAGAGTCCTaGAGCCGGTCCACAGCTGCA +
Preference number: 4 (lower is better)
Translates to: EVAGKTAQLKALVAQFGSKVPES*SRSTAA
Trigger: TGCAGCTGTGGACCGGCTGCAGGACTCTGGCACCTT...GGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCCACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp ACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGCCACACACTGGAAGGTaGCAGAGTCCTGCAGCCGGT +
Preference number: 4 (lower is better)
Translates to: TWVWVSVHKPRVGRTHLLPHTGR*QSPAAG
Trigger: ACCGGCTGCAGGACTCTGGCACCTTCCAGTGTGTGG...CAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp GCCCAGACATCAGACTTGGTAGAGAAGTCACCCTCCAGGATGGCCTCGGGGGACTACCACGTCCTGGGGTaGCAGCACCACCCTGGCAAA +
Preference number: 4 (lower is better)
Translates to: AQTSDLVEKSPSRMASGDYHVLG*QHHPGK
Trigger: TTTGCCAGGGTGGTGCTGGCACCCCAGGACGTGGTA...GTCCCCCGAGGCCATCCTGGAGGGTGACTTCTCTACCAAGTCTGATGTCTGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR GCA 90 bp GAGGTGGCAGGGAAAACTGCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCTACCACGTCCTGGGGTaGCAGCACCACCCTGGCAAA +
Preference number: 4 (lower is better)
Translates to: EVAGKTAQLKALVAQFGSYHVLG*QHHPGK
Trigger: TTTGCCAGGGTGGTGCTGGCACCCCAGGACGTGGTA...GGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCCACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp GGAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTACCACGTCCTGGGGTaGCAGCACCACCCTGGCAAA +
Preference number: 4 (lower is better)
Translates to: GRRGSGSVCTSPEWGGLTYHVLG*QHHPGK
Trigger: TTTGCCAGGGTGGTGCTGGCACCCCAGGACGTGGTA...AGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp GAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTTCCTCAAAGAGCCACTaGAGGCTCGGGGGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: EDVGLGQCAQAQSGEDSLSSKSH*RLGGGW
Trigger: CCAGCCACCCCCGAGCCTGCAGTGGCTCTTTGAGGA...AAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp ACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGGGTAGATCCCTGCATTaGGTGGCCGGACCTGGGTCA +
Preference number: 4 (lower is better)
Translates to: TWVWVSVHKPRVGRTHLLGRSLH*VAGPGS
Trigger: TGACCCAGGTCCGGCCACGCAATGCAGGGATCTACC...CAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp ACAAAGCGGTTGTTGGACAGGTGCTCCATGCCCAGGGCTACCTGGGTGCATAGGGCAGCGGTAGATCCCTaGATTGCGTGGCCGGACCTG +
Preference number: 4 (lower is better)
Translates to: TKRLLDRCSMPRATWVHRAAVDP*IAWPDL
Trigger: CAGGTCCGGCCACGCAATGCAGGGATCTACCGCTGC...CCTATGCACCCAGGTAGCCCTGGGCATGGAGCACCTGTCCAACAACCGCTTTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR GCA 90 bp TGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTGCAGCGGTAGATCCCTaGATTGCGTGGCCGGACCTG +
Preference number: 4 (lower is better)
Translates to: WVWVSVHKPRVGRTHLLCAAVDP*IAWPDL
Trigger: CAGGTCCGGCCACGCAATGCAGGGATCTACCGCTGC...ACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp GGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCATGGGTGGGCCCCTCTaGCCCTGGCCAATGCAGCGG +
Preference number: 4 (lower is better)
Translates to: GGQGSCPSCCELPSRDVLMGGPL*PWPMQR
Trigger: CCGCTGCATTGGCCAGGGGCAGAGGGGCCCACCCAT...GAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR GCA 90 bp CCAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCATGGGTGGGCCCCTCTaGCCCTGGCCAATGCAGCGG +
Preference number: 4 (lower is better)
Translates to: PGGQGSCPSCCELPSRDVMGGPL*PWPMQR
Trigger: CCGCTGCATTGGCCAGGGGCAGAGGGGCCCACCCAT...GACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR GCA 90 bp CAGATGAGTGGCAGAGTTGGACCCGGTCAAGGGGAGAAGTTGAAGGCCAGAAATAGCCGGACTCCCGCGTaGTCCCACCACACGCTGGGC +
Preference number: 4 (lower is better)
Translates to: QMSGRVGPGQGEKLKARNSRTPA*SHHTLG
Trigger: GCCCAGCGTGTGGTGGGAGCACGCGGGAGTCCGGCT...ATTTCTGGCCTTCAACTTCTCCCCTTGACCGGGTCCAACTCTGCCACTCATCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp CAGCCGATAGAGTTTGGAAGGGCAGCCCTCGGGCTGAGGAAGTCTAGCCTTCCCTGCTGCCGGCTGGGGTaGTGCTCATACAACGGTACC +
Preference number: 4 (lower is better)
Translates to: QPIEFGRAALGLRKSSLPCCRLG*CSYNGT
Trigger: GGTACCGTTGTATGAGCAGCACCCCAGCCGGCAGCA...GGGAAGGCTAGACTTCCTCAGCCCGAGGGCTGCCCTTCCAAACTCTATCGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR GCA 90 bp ACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGCTGCCGGCTGGGGTaGTGCTCATACAACGGTACC +
Preference number: 4 (lower is better)
Translates to: TWVWVSVHKPRVGRTHLLCCRLG*CSYNGT
Trigger: GGTACCGTTGTATGAGCAGCACCCCAGCCGGCAGCA...CAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp CAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTCAGCCTCCCAAAGGATGCTTGCGCCTCGATGCTaGCGGCTGGGGTGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: QLKALVAQFGSKSASQRMLAPRC*RLGCCS
Trigger: TGAGCAGCACCCCAGCCGGCAGCATCGAGGCGCAAG...CATCCTTTGGGAGGCTGACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp AGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCCCTTGCGCCTCGATGCTaGCGGCTGGGGTGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: RDLAHHAVSFPLEMSSPALAPRC*RLGCCS
Trigger: TGAGCAGCACCCCAGCCGGCAGCATCGAGGCGCAAG...GGCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR GCA 90 bp AGGCCAGAAATTGGGGTTACCTGTGGCACCCACACTGTCCCTGATAGAGGAAGAGGGCTTGCGCCTCGATaGTGCCGGCTGGGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: RPEIGVTCGTHTVPDRGRGLAPR*CRLGCC
Trigger: GCAGCACCCCAGCCGGCAGCATCGAGGCGCAAGCCC...TCTTCCTCTATCAGGGACAGTGTGGGTGCCACAGGTAACCCCAATTTCTGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp TGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTACTTGGACACGGGCTTaGGCCTCGATGCTGCCGGCT +
Preference number: 4 (lower is better)
Translates to: WVWVSVHKPRVGRTHLLCTWTRA*ASMLPA
Trigger: AGCCGGCAGCATCGAGGCGCAAGCCCGTGTCCAAGT...ACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp ACGGTGCTGTCTCCCAGGGCGCTGGCAATCTCACTGAAGGAGGGCCGGTCCTTGCCAGGATGCGGTCCTTaGCTTTCCACTGAATCAGCG +
Preference number: 4 (lower is better)
Translates to: TVLSPRALAISLKEGRSLPGCGP*LSTESA
Trigger: CGCTGATTCAGTGGAAAGGCAAGGACCGCATCCTGG...CAAGGACCGGCCCTCCTTCAGTGAGATTGCCAGCGCCCTGGGAGACAGCACCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR GCA 90 bp GCAGCGCTGCATCAGCCGATAGAGTTTGGAAGGGCAGCCCTCGGGCTGAGGAAGTGGTGGGGTCCAGGATaGGGTCCTTGCCTTTCCACT +
Preference number: 4 (lower is better)
Translates to: AALHQPIEFGRAALGLRKWWGPG*GPCLST
Trigger: AGTGGAAAGGCAAGGACCGCATCCTGGACCCCACCA...CTTCCTCAGCCCGAGGGCTGCCCTTCCAAACTCTATCGGCTGATGCAGCGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR GCA 90 bp GTGGGGAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTTGGTGGGGTCCAGGATaGGGTCCTTGCCTTTCCACT +
Preference number: 4 (lower is better)
Translates to: VGKTWVWVSVHKPRVGRTWWGPG*GPCLST
Trigger: AGTGGAAAGGCAAGGACCGCATCCTGGACCCCACCA...AGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTCCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000470019.5
CDS-3UTR GCA 90 bp TGGTGGCCGCGGGGCCGGAGCCCAAGCTGGTCAAGGCCACTTCTTCTTGGATCTAGCTGTTGCCTGCAATaGAGGTGTAGCGGCCTGAGT +
Preference number: 4 (lower is better)
Translates to: WWPRGRSPSWSRPLLLGSSCCLQ*RCSGLS
Trigger: ACTCAGGCCGCTACACCTGCATTGCAGGCAACAGCT...AGATCCAAGAAGAAGTGGCCTTGACCAGCTTGGGCTCCGGCCCCGCGGCCACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR GCA 90 bp AGGCCCTGCTCAGACCTCAGCAATGCCTGTTGCACTAGGGCAGGGGCCTCAGGGGCAGCCGCTTGGCTTTaGAGCGCTTCTTGCAGTAGA +
Preference number: 4 (lower is better)
Translates to: RPCSDLSNACCTRAGASGAAAWL*SASCSR
Trigger: TCTACTGCAAGAAGCGCTGCAAAGCCAAGCGGCTGC...CCCTGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAGGTCTGAGCAGGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp GCGTGGTTCAGCTTCCCAAACATCTCCAACTCCCTCCGGAAGTCCAGCTGCTGCCCCTCGGGCTGCTTCTaGAGCCGCTTGGCTTTGCAG +
Preference number: 4 (lower is better)
Translates to: AWFSFPNISNSLRKSSCCPSGCF*SRLALQ
Trigger: CTGCAAAGCCAAGCGGCTGCAGAAGCAGCCCGAGGG...GCAGCAGCTGGACTTCCGGAGGGAGTTGGAGATGTTTGGGAAGCTGAACCACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470019.5
ENST00000497957.1
CDS-3UTR GCA 90 bp GGCAGGGAAAACTGCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTCGAGGGCTGCCCGTTCTaGAAAGGCCCACCGTTGAGG +
Preference number: 4 (lower is better)
Translates to: GRENCPAQSPSRPVWVQVEGCPF*KGPPLR
Trigger: CCTCAACGGTGGGCCTTTGCAGAACGGGCAGCCCTC...GACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp CACTCCCTCCTCCAAGCCCTGAGCCTTTGCCAGGAACACCTCCCCAAACTCACTGAGGGCTGCCCGTTCTaGAAAGGCCCACCGTTGAGG +
Preference number: 4 (lower is better)
Translates to: HSLLQALSLCQEHLPKLTEGCPF*KGPPLR
Trigger: CCTCAACGGTGGGCCTTTGCAGAACGGGCAGCCCTC...AGTGAGTTTGGGGAGGTGTTCCTGGCAAAGGCTCAGGGCTTGGAGGAGGGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
CDS-3UTR GCA 90 bp GTGGGGAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTATCTCTGCTGAGGGCTaGCCGTTCTGCAAAGGCCCA +
Preference number: 4 (lower is better)
Translates to: VGKTWVWVSVHKPRVGRTISAEG*PFCKGP
Trigger: TGGGCCTTTGCAGAACGGGCAGCCCTCAGCAGAGAT...AGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTCCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp CCCTGCCCAGGCCATCCTGAGCGGGCTCCCTCCTCACGGCTTGCTGTCCACGGTGCATCTTATCACTTGTaGTGTGGCGTTTGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: PCPGHPERAPSSRLAVHGASYHL*CGVCWW
Trigger: CCACCAACAAACGCCACAGCACAAGTGATAAGATGC...ACCGTGGACAGCAAGCCGTGAGGAGGGAGCCCGCTCAGGATGGCCTGGGCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
CDS-3UTR GCA 90 bp GCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTCAGCCTCCCAAAGGAGCGTGGTGATGGGCTaGAGGCTAGACCGTGGGAAG +
Preference number: 4 (lower is better)
Translates to: AQLKALVAQFGSKSASQRSVVMG*RLDRGK
Trigger: CTTCCCACGGTCTAGCCTGCAGCCCATCACCACGCT...CCTTTGGGAGGCTGACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp AGCCTAGCCCTCCCCAGGCAAAGTTGGCAGATGAGTGGCAGAGTTGGACCCGGTCCAGGGCTACCTGGGTaGATAGGGCCACCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: SLALPRQSWQMSGRVGPGPGLPG*IGPPSA
Trigger: AGCAGAAGGTGGCCCTATGCACCCAGGTAGCCCTGG...ACCGGGTCCAACTCTGCCACTCATCTGCCAACTTTGCCTGGGGAGGGCTAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp GAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTTGGACAGGTGCTCCATaGCCAGGGCTACCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: EDVGLGQCAQAQSGEDSLWTGAP*PGLPGC
Trigger: GCACCCAGGTAGCCCTGGGCATGGAGCACCTGTCCA...AAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp GGCAGGGAAAACTGCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTCTGGACAGGTGCTCCATaGCCAGGGCTACCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: GRENCPAQSPSRPVWVQVWTGAP*PGLPGC
Trigger: GCACCCAGGTAGCCCTGGGCATGGAGCACCTGTCCA...GACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp AGCCTAGCCCTCCCCAGGCAAAGTTGGCAGATGAGTGGCAGAGTTGGACCCGGTCGGTTGTTGGACAGGTaGTCCATGCCCAGGGCTACC +
Preference number: 4 (lower is better)
Translates to: SLALPRQSWQMSGRVGPGRLLDR*SMPRAT
Trigger: GGTAGCCCTGGGCATGGAGCACCTGTCCAACAACCG...ACCGGGTCCAACTCTGCCACTCATCTGCCAACTTTGCCTGGGGAGGGCTAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp GGAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTCGGTTGTTGGACAGGTaGTCCATGCCCAGGGCTACC +
Preference number: 4 (lower is better)
Translates to: GRRGSGSVCTSPEWGGLTRLLDR*SMPRAT
Trigger: GGTAGCCCTGGGCATGGAGCACCTGTCCAACAACCG...AGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp GGAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTCCCTCCTCACGGCTTaGTGTCCACGGTGCTGTCTC +
Preference number: 4 (lower is better)
Translates to: GRRGSGSVCTSPEWGGLTSLLTA*CPRCCL
Trigger: GAGACAGCACCGTGGACAGCAAGCCGTGAGGAGGGA...AGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp AGCCTAGCCCTCCCCAGGCAAAGTTGGCAGATGAGTGGCAGAGTTGGACCCGGTTCCCTCCTCACGGCTTaGTGTCCACGGTGCTGTCTC +
Preference number: 4 (lower is better)
Translates to: SLALPRQSWQMSGRVGPGSLLTA*CPRCCL
Trigger: GAGACAGCACCGTGGACAGCAAGCCGTGAGGAGGGA...ACCGGGTCCAACTCTGCCACTCATCTGCCAACTTTGCCTGGGGAGGGCTAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp AGCCTAGCCCTCCCCAGGCAAAGTTGGCAGATGAGTGGCAGAGTTGGACCCGGTGGAAAGGCCAGGCCCTaGTCAGACCTCAGCAATGCC +
Preference number: 4 (lower is better)
Translates to: SLALPRQSWQMSGRVGPGGKARP*SDLSNA
Trigger: GGCATTGCTGAGGTCTGAGCAGGGCCTGGCCTTTCC...ACCGGGTCCAACTCTGCCACTCATCTGCCAACTTTGCCTGGGGAGGGCTAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp TGCCCGTTCTGCAAAGGCCCACCGTTGAGGCATTCCATCTCTGGCTCCTCGCCCCTCCGGAAGTCCAGCTaGTGCTGCTCATCCTTGCTC +
Preference number: 4 (lower is better)
Translates to: CPFCKGPPLRHSISGSSPLRKSS*CCSSLL
Trigger: GAGCAAGGATGAGCAGCAGCAGCTGGACTTCCGGAG...GGGCGAGGAGCCAGAGATGGAATGCCTCAACGGTGGGCCTTTGCAGAACGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470019.5
ENST00000497957.1
CDS-3UTR GCA 90 bp CTGCATCAGCCGATAGAGTTTGGAAGGGCAGCCCTCGGGCTGAGGAAGTCTAGCGAGGGCTGCCCGTTCTaGAAAGGCCCACCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: LHQPIEFGRAALGLRKSSEGCPF*KGPPGK
Trigger: CTTCCCAGGTGGGCCTTTGCAGAACGGGCAGCCCTC...GCTAGACTTCCTCAGCCCGAGGGCTGCCCTTCCAAACTCTATCGGCTGATGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461389.1
CDS-3UTR GCA 90 bp CACTTGTGCTGTGGCGTTTGTTGGTGGCCGCGGGGCCGGAGCCCAAGCTGGTCACCGAATCCCCACCGCTaGCACAAAAATGGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: HLCCGVCWWPRGRSPSWSPNPHR*HKNGFC
Trigger: ACAGAAGCCATTTTTGTGGCAGCGGTGGGGATTCGG...TGACCAGCTTGGGCTCCGGCCCCGCGGCCACCAACAAACGCCACAGCACAAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000461100.5
ENST00000494146.5
ENST00000497957.1
CDS-3UTR CCA 90 bp GAGGTGGCAGGGAAAACTGCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCCCCTGCAGTGCATCCTaGGAGGACGGCTGCTTGATG +
Preference number: 4 (lower is better)
Translates to: EVAGKTAQLKALVAQFGSPCSAS*EDGCLM
Trigger: CATCAAGCAGCCGTCCTCCCAGGATGCACTGCAGGG...GGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCCACCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp GCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTCAGCCTCCCAAAGGCCCTGCAGTGCATCCTaGGAGGACGGCTGCTTGATG +
Preference number: 4 (lower is better)
Translates to: AQLKALVAQFGSKSASQRPCSAS*EDGCLM
Trigger: CATCAAGCAGCCGTCCTCCCAGGATGCACTGCAGGG...CCTTTGGGAGGCTGACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp CAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCCTCAGGCTGCTGCCCTaGGCGAAACGCCGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: QEDRDLAHHAVSFPLEMSLRLLP*AKRRSV
Trigger: CACGGAGCGGCGTTTCGCCCAGGGCAGCAGCCTGAG...GGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CCA 90 bp AGGCCCTGCTCAGACCTCAGCAATGCCTGTTGCACTAGGGCAGGGGCCTCAGGGTGTGACCTGGGTCTGTaGCTGGATCTCAGCTTCCGA +
Preference number: 4 (lower is better)
Translates to: RPCSDLSNACCTRAGASGCDLGL*LDLSFR
Trigger: TCGGAAGCTGAGATCCAGCCACAGACCCAGGTCACA...CCCTGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAGGTCTGAGCAGGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp GGCCGCGGGGCCGGAGCCCAAGCTGGTCAAGGCCACTTCTTCTTGGATCTCTGCCAACGAAGTGTGACCTaGGTCTGTGGCTGGATCTCA +
Preference number: 4 (lower is better)
Translates to: GRGAGAQAGQGHFFLDLCQRSVT*VCGWIS
Trigger: TGAGATCCAGCCACAGACCCAGGTCACACTTCGTTG...GCAGAGATCCAAGAAGAAGTGGCCTTGACCAGCTTGGGCTCCGGCCCCGCGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR CCA 90 bp TGCTCAGACCTCAGCAATGCCTGTTGCACTAGGGCAGGGGCCTCAGGGCCCAGGGGGTGCCCATCAATGTaGCAACGAAGTGTGACCTGG +
Preference number: 4 (lower is better)
Translates to: CSDLSNACCTRAGASGPRGCPSM*QRSVTW
Trigger: CCAGGTCACACTTCGTTGCCACATTGATGGGCACCC...CCTGGGCCCTGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAGGTCTGAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp CTGCATCAGCCGATAGAGTTTGGAAGGGCAGCCCTCGGGCTGAGGAAGTCTAGCATGCTCAGGACCAGCTaGCCGGAGCGTCAGGTTCCG +
Preference number: 4 (lower is better)
Translates to: LHQPIEFGRAALGLRKSSMLRTS*PERQVP
Trigger: CGGAACCTGACGCTCCGGCCAGCTGGTCCTGAGCAT...GCTAGACTTCCTCAGCCCGAGGGCTGCCCTTCCAAACTCTATCGGCTGATGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230418.8
CDS-3UTR CCA 90 bp TGCTCAGACCTCAGCAATGCCTGTTGCACTAGGGCAGGGGCCTCAGGGCCCAGGCTCAAGGTGAAGTTCTaGCTGCTGCAAGCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: CSDLSNACCTRAGASGPRLKVKF*LLQAWP
Trigger: TGGCCAGGCTTGCAGCAGCCAGAACTTCACCTTGAG...CCTGGGCCCTGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAGGTCTGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
CDS-3UTR CCA 90 bp TGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTGCTACTACCACGTCCTaGGGTGCCAGCACCACCCTG +
Preference number: 4 (lower is better)
Translates to: WVWVSVHKPRVGRTHLLCATTTS*GASTTL
Trigger: CAGGGTGGTGCTGGCACCCCAGGACGTGGTAGTAGC...ACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp TGTGCTGTGGCGTTTGTTGGTGGCCGCGGGGCCGGAGCCCAAGCTGGTCAAGGCACTGGCAATGGAACATaGCCTCCTCATACCTCGCTA +
Preference number: 4 (lower is better)
Translates to: CAVAFVGGRGAGAQAGQGTGNGT*PPHTSL
Trigger: TAGCGAGGTATGAGGAGGCCATGTTCCATTGCCAGT...GCCTTGACCAGCTTGGGCTCCGGCCCCGCGGCCACCAACAAACGCCACAGCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR CCA 90 bp CTTATCACTTGTGCTGTGGCGTTTGTTGGTGGCCGCGGGGCCGGAGCCCAAGCTGGCTGGGCTGAGAACTaGCAATGGAACATGGCCTCC +
Preference number: 4 (lower is better)
Translates to: LITCAVAFVGGRGAGAQAGWAEN*QWNMAS
Trigger: GGAGGCCATGTTCCATTGCCAGTTCTCAGCCCAGCC...AGCTTGGGCTCCGGCCCCGCGGCCACCAACAAACGCCACAGCACAAGTGATAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR CCA 90 bp TGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTAGGCTCGGGGGTGGCTaGGCTGAGAACTGGCAATGG +
Preference number: 4 (lower is better)
Translates to: WVWVSVHKPRVGRTHLLCRLGGG*AENWQW
Trigger: CCATTGCCAGTTCTCAGCCCAGCCACCCCCGAGCCT...ACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp CAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTCAGCCTCCCAAAGGATGGGCTCTGCGGAGGTGTaGGGGGCGACTGCGGTTAGT +
Preference number: 4 (lower is better)
Translates to: QLKALVAQFGSKSASQRMGSAEV*GATAVS
Trigger: ACTAACCGCAGTCGCCCCCCACACCTCCGCAGAGCC...CATCCTTTGGGAGGCTGACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp GTCACTATTTCCTCTGGAGCACCCACCCTAACCCCTGTGCCTGGCTCTCTACTGGGCTCTGCGGAGGTGTaGGGGGCGACTGCGGTTAGT +
Preference number: 4 (lower is better)
Translates to: VTISSGAPTLTPVPGSLLGSAEV*GATAVS
Trigger: ACTAACCGCAGTCGCCCCCCACACCTCCGCAGAGCC...CAGTAGAGAGCCAGGCACAGGGGTTAGGGTGGGTGCTCCAGAGGAAATAGTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471863.5
CDS-3UTR CCA 90 bp GGAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTCGTTGGCAAACACTGTaGCTCTGCGGAGGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: GRRGSGSVCTSPEWGGLTRWQTL*LCGGVG
Trigger: CCCCACACCTCCGCAGAGCCACAGTGTTTGCCAACG...AGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp AGCCTAGCCCTCCCCAGGCAAAGTTGGCAGATGAGTGGCAGAGTTGGACCCGGTCGTTGGCAAACACTGTaGCTCTGCGGAGGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: SLALPRQSWQMSGRVGPGRWQTL*LCGGVG
Trigger: CCCCACACCTCCGCAGAGCCACAGTGTTTGCCAACG...ACCGGGTCCAACTCTGCCACTCATCTGCCAACTTTGCCTGGGGAGGGCTAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp ACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGCGTTGGCAAACACTGTaGCTCTGCGGAGGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: TWVWVSVHKPRVGRTHLLRWQTL*LCGGVG
Trigger: CCCCACACCTCCGCAGAGCCACAGTGTTTGCCAACG...CAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp CAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTCAGCCTCCCAAAGGATGTTGCGTGGCCGGACCTaGGTCAGCAGCAGAGACCCG +
Preference number: 4 (lower is better)
Translates to: QLKALVAQFGSKSASQRMLRGRT*VSSRDP
Trigger: CGGGTCTCTGCTGCTGACCCAGGTCCGGCCACGCAA...CATCCTTTGGGAGGCTGACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp AGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCCTTGCGTGGCCGGACCTaGGTCAGCAGCAGAGACCCG +
Preference number: 4 (lower is better)
Translates to: RDLAHHAVSFPLEMSSPALRGRT*VSSRDP
Trigger: CGGGTCTCTGCTGCTGACCCAGGTCCGGCCACGCAA...GGCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CCA 90 bp TGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTGATCCCTGCATTGCGTaGCCGGACCTGGGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: WVWVSVHKPRVGRTHLLCDPCIA*PDLGQQ
Trigger: CTGCTGACCCAGGTCCGGCCACGCAATGCAGGGATC...ACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp GAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTCTGGCAGACCCTTaGGGGGAAGGCAGGTCACAC +
Preference number: 4 (lower is better)
Translates to: EDVGLGQCAQAQSGEDSLALADP*GEGRSH
Trigger: GTGTGACCTGCCTTCCCCCCAAGGGTCTGCCAGAGC...AAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp GGCAGGGAAAACTGCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTCGCTGACCAGCCAGGTTaGCCGCGTGGCAGGTGTAGA +
Preference number: 4 (lower is better)
Translates to: GRENCPAQSPSRPVWVQVADQPG*PRGRCR
Trigger: TCTACACCTGCCACGCGGCCAACCTGGCTGGTCAGC...GACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp GAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGACCAGCCAGGTTaGCCGCGTGGCAGGTGTAGA +
Preference number: 4 (lower is better)
Translates to: EDVGLGQCAQAQSGEDSLADQPG*PRGRCR
Trigger: TCTACACCTGCCACGCGGCCAACCTGGCTGGTCAGC...AAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp TGCTCCATGCCCAGGGCTACCTGGGTGCATAGGGCCACCTTCTGCTTGGTGCTGTCCAGCTGGCTGTCTTaGGGCTTCTTCAGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: CSMPRATWVHRATFCLVLSSWLS*GFFSQE
Trigger: CTCCTGGCTGAAGAAGCCCCAAGACAGCCAGCTGGA...CAGCACCAAGCAGAAGGTGGCCCTATGCACCCAGGTAGCCCTGGGCATGGAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR CCA 90 bp GAGGTGGCAGGGAAAACTGCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCGTCTGTCACCCACTCTaGGAGGCTGCTCCCATCTGC +
Preference number: 4 (lower is better)
Translates to: EVAGKTAQLKALVAQFGSVCHPL*EAAPIC
Trigger: GCAGATGGGAGCAGCCTCCCAGAGTGGGTGACAGAC...GGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCCACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp GGAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTGGCCCTGCGGCCCGTTaGAGGCAATGCAAGTGTAGT +
Preference number: 4 (lower is better)
Translates to: GRRGSGSVCTSPEWGGLTGPAAR*RQCKCS
Trigger: ACTACACTTGCATTGCCTCCAACGGGCCGCAGGGCC...AGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp ATCTCTGCTGAGGGCTGCCCGTTCTGCAAAGGCCCACCGTTGAGGCATTCCATCACATGGGCACGAATCTaGCCCTGCGGCCCGTTGGAG +
Preference number: 4 (lower is better)
Translates to: ISAEGCPFCKGPPLRHSITWARI*PCGPLE
Trigger: CTCCAACGGGCCGCAGGGCCAGATTCGTGCCCATGT...GATGGAATGCCTCAACGGTGGGCCTTTGCAGAACGGGCAGCCCTCAGCAGAGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR CCA 90 bp GTGGGGAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTACAGTGAGCTGGACATaGGCACGAATCTGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: VGKTWVWVSVHKPRVGRTTVSWT*ARIWPC
Trigger: GCAGGGCCAGATTCGTGCCCATGTCCAGCTCACTGT...AGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTCCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp AGGCCCTGCTCAGACCTCAGCAATGCCTGTTGCACTAGGGCAGGGGCCTCAGGGACTGCCACAGTGAGCTaGACATGGGCACGAATCTGG +
Preference number: 4 (lower is better)
Translates to: RPCSDLSNACCTRAGASGTATVS*TWARIW
Trigger: CCAGATTCGTGCCCATGTCCAGCTCACTGTGGCAGT...CCCTGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAGGTCTGAGCAGGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp GTGGGGAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTAGGGCTGTGTGGCCCTaGTACACAGTCGTACGCTCT +
Preference number: 4 (lower is better)
Translates to: VGKTWVWVSVHKPRVGRTRAVWP*YTVVRS
Trigger: AGAGCGTACGACTGTGTACCAGGGCCACACAGCCCT...AGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTCCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp TGCTCAGACCTCAGCAATGCCTGTTGCACTAGGGCAGGGGCCTCAGGGCCCAGGTGCAGTAGGGCTGTGTaGCCCTGGTACACAGTCGTA +
Preference number: 4 (lower is better)
Translates to: CSDLSNACCTRAGASGPRCSRAV*PWYTVV
Trigger: TACGACTGTGTACCAGGGCCACACAGCCCTACTGCA...CCTGGGCCCTGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAGGTCTGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp GGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTCCTCTATAGGCTTGGGGTCCCCCTaGGCCTCGCACTGCAGTAGG +
Preference number: 4 (lower is better)
Translates to: GQCAQAQSGEDSLAVSSIGLGSP*ASHCSR
Trigger: CCTACTGCAGTGCGAGGCCCAGGGGGACCCCAAGCC...TATAGAGGACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp TGTGTCCTCTATAATCCTGGTCTAGACCCCCAAGTGGGACCAGTGGGCCAAGAGGGCTTGGGGTCCCCCTaGGCCTCGCACTGCAGTAGG +
Preference number: 4 (lower is better)
Translates to: CVLYNPGLDPQVGPVGQEGLGSP*ASHCSR
Trigger: CCTACTGCAGTGCGAGGCCCAGGGGGACCCCAAGCC...CTCTTGGCCCACTGGTCCCACTTGGGGGTCTAGACCAGGATTATAGAGGACACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp GAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCGGCTTGGGGTCCCCCTaGGCCTCGCACTGCAGTAGG +
Preference number: 4 (lower is better)
Translates to: EDRDLAHHAVSFPLEMSSGLGSP*ASHCSR
Trigger: CCTACTGCAGTGCGAGGCCCAGGGGGACCCCAAGCC...GGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CCA 90 bp ACACCGAAGGCCCAGACATCAGACTTGGTAGAGAAGTCACCCTCCAGGATGGCCACTGAATCAGCGGCTTaGGGTCCCCCTGGGCCTCGC +
Preference number: 4 (lower is better)
Translates to: TPKAQTSDLVEKSPSRMATESAA*GPPGPR
Trigger: GCGAGGCCCAGGGGGACCCCAAGCCGCTGATTCAGT...GGCCATCCTGGAGGGTGACTTCTCTACCAAGTCTGATGTCTGGGCCTTCGGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR CCA 90 bp CAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCACTGAATCAGCGGCTTaGGGTCCCCCTGGGCCTCGC +
Preference number: 4 (lower is better)
Translates to: QGSCPSCCELPSRDVLPCTESAA*GPPGPR
Trigger: GCGAGGCCCAGGGGGACCCCAAGCCGCTGATTCAGT...GCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CCA 90 bp AGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCCACTGAATCAGCGGCTTaGGGTCCCCCTGGGCCTCGC +
Preference number: 4 (lower is better)
Translates to: RDLAHHAVSFPLEMSSPATESAA*GPPGPR
Trigger: GCGAGGCCCAGGGGGACCCCAAGCCGCTGATTCAGT...GGCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CCA 90 bp GGCAGGGAAAACTGCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTCTGGGTCCCAGCTTGGTaGGGTCCAGGATGCGGTCCT +
Preference number: 4 (lower is better)
Translates to: GRENCPAQSPSRPVWVQVWVPAW*GPGCGP
Trigger: AGGACCGCATCCTGGACCCCACCAAGCTGGGACCCA...GACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000470019.5
CDS-3UTR CCA 90 bp CCCAAGCTGGTCAAGGCCACTTCTTCTTGGATCTCTGCTGAGGGCTGCCCGTTCTCCTGGGTCCCAGCTTaGTGGGGTCCAGGATGCGGT +
Preference number: 4 (lower is better)
Translates to: PKLVKATSSWISAEGCPFSWVPA*WGPGCG
Trigger: ACCGCATCCTGGACCCCACCAAGCTGGGACCCAGGA...GAACGGGCAGCCCTCAGCAGAGATCCAAGAAGAAGTGGCCTTGACCAGCTTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR CCA 90 bp GTGGGGAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTTCAGGGGCCACGTCATaGATCACCAGGGAGCCATTC +
Preference number: 4 (lower is better)
Translates to: VGKTWVWVSVHKPRVGRTSGATS*ITREPF
Trigger: GAATGGCTCCCTGGTGATCCATGACGTGGCCCCTGA...AGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTCCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000470019.5
CDS-3UTR CCA 90 bp GCATCTTATCACTTGTGCTGTGGCGTTTGTTGGTGGCCGCGGGGCCGGAGCCCAGGCCGGAGCCCAAGCTaGTCAAGGCCACTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: ASYHLCCGVCWWPRGRSPGRSPS*SRPLLL
Trigger: AAGAAGAAGTGGCCTTGACCAGCTTGGGCTCCGGCC...TGGGCTCCGGCCCCGCGGCCACCAACAAACGCCACAGCACAAGTGATAAGATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
CDS-3UTR CCA 90 bp TGCCTGCCCACCATGGGGCATCTCTCCATGTGTAAACACTTCCCACATCAGCACTGTGGCGTTTGTTGGTaGCCGCGGGGCCGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: CLPTMGHLSMCKHFPHQHCGVCW*PRGRSP
Trigger: TGGGCTCCGGCCCCGCGGCCACCAACAAACGCCACA...GTGCTGATGTGGGAAGTGTTTACACATGGAGAGATGCCCCATGGTGGGCAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
CDS-3UTR CCA 90 bp CAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTGTGGCGTTTGTTGGTaGCCGCGGGGCCGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: QEDRDLAHHAVSFPLEMSCGVCW*PRGRSP
Trigger: TGGGCTCCGGCCCCGCGGCCACCAACAAACGCCACA...GGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CCA 90 bp ATGCCCACCCACCCCACGCTGCAATTACATATAAAAGCCGCCCGTGGTGCATACTGTGGCGTTTGTTGGTaGCCGCGGGGCCGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: MPTHPTLQLHIKAARGAYCGVCW*PRGRSP
Trigger: TGGGCTCCGGCCCCGCGGCCACCAACAAACGCCACA...GTATGCACCACGGGCGGCTTTTATATGTAATTGCAGCGTGGGGTGGGTGGGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp GAGGTGGCAGGGAAAACTGCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCATGCCCAGGGCTACCTaGGTGCATAGGGCCACCTTC +
Preference number: 4 (lower is better)
Translates to: EVAGKTAQLKALVAQFGSMPRAT*VHRATF
Trigger: GAAGGTGGCCCTATGCACCCAGGTAGCCCTGGGCAT...GGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCCACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp TGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTAGTCACCCTCCAGGATaGCCTCGGGGGACATCCAGC +
Preference number: 4 (lower is better)
Translates to: WVWVSVHKPRVGRTHLLCSHPPG*PRGTSS
Trigger: GCTGGATGTCCCCCGAGGCCATCCTGGAGGGTGACT...ACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp GGCAGGGAAAACTGCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTCAGTCACCCTCCAGGATaGCCTCGGGGGACATCCAGC +
Preference number: 4 (lower is better)
Translates to: GRENCPAQSPSRPVWVQVSHPPG*PRGTSS
Trigger: GCTGGATGTCCCCCGAGGCCATCCTGGAGGGTGACT...GACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp AGGCCCTGCTCAGACCTCAGCAATGCCTGTTGCACTAGGGCAGGGGCCTCAGGGTCTGCCTGCCCACCATaGGGCATCTCTCCATGTGTA +
Preference number: 4 (lower is better)
Translates to: RPCSDLSNACCTRAGASGSACPP*GISPCV
Trigger: TACACATGGAGAGATGCCCCATGGTGGGCAGGCAGA...CCCTGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAGGTCTGAGCAGGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp TCTTATCACTTGTGCTGTGGCGTTTGTTGGTGGCCGCGGGGCCGGAGCCCAAGCTCAGCCGATAGAGTTTaGAAGGGCAGCCCTCGGGCT +
Preference number: 4 (lower is better)
Translates to: SYHLCCGVCWWPRGRSPSSADRV*KGSPRA
Trigger: AGCCCGAGGGCTGCCCTTCCAAACTCTATCGGCTGA...GCTTGGGCTCCGGCCCCGCGGCCACCAACAAACGCCACAGCACAAGTGATAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR CCA 90 bp GGGGGACATCCAGCGCAGCGGCACCCAGGCCTGGCGGAAGTGGTAGTACTCACTAAGTTGGCAGATGAGTaGCAGAGTTGGACCCGGTCA +
Preference number: 4 (lower is better)
Translates to: GGHPAQRHPGLAEVVVLTKLADE*QSWTRS
Trigger: TGACCGGGTCCAACTCTGCCACTCATCTGCCAACTT...AGTGAGTACTACCACTTCCGCCAGGCCTGGGTGCCGCTGCGCTGGATGTCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR CCA 90 bp ATCACTTGTGCTGTGGCGTTTGTTGGTGGCCGCGGGGCCGGAGCCCAAGCTGGTTGCACAAGCCCAGAGTaGGGAGGACTCACTTGCTGT +
Preference number: 4 (lower is better)
Translates to: ITCAVAFVGGRGAGAQAGCTSPE*GGLTCC
Trigger: ACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCA...ACCAGCTTGGGCTCCGGCCCCGCGGCCACCAACAAACGCCACAGCACAAGTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR CCA 90 bp GAGGTGGCAGGGAAAACTGCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCGGGAAGACGTGGGTCTaGGTCAGTGTGCACAAGCCC +
Preference number: 4 (lower is better)
Translates to: EVAGKTAQLKALVAQFGSGKTWV*VSVHKP
Trigger: GGGCTTGTGCACACTGACCCAGACCCACGTCTTCCC...GGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCCACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp AGCCTAGCCCTCCCCAGGCAAAGTTGGCAGATGAGTGGCAGAGTTGGACCCGGTAGGGTGGGGAAGACGTaGGTCTGGGTCAGTGTGCAC +
Preference number: 4 (lower is better)
Translates to: SLALPRQSWQMSGRVGPGRVGKT*VWVSVH
Trigger: GTGCACACTGACCCAGACCCACGTCTTCCCCACCCT...ACCGGGTCCAACTCTGCCACTCATCTGCCAACTTTGCCTGGGGAGGGCTAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp GCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTCAGCCTCCCAAAGGGGAGCCGCACCACGTTaGCGTGGTTCAGCTTCCCAA +
Preference number: 4 (lower is better)
Translates to: AQLKALVAQFGSKSASQRGAAPR*RGSASQ
Trigger: TTGGGAAGCTGAACCACGCCAACGTGGTGCGGCTCC...CCTTTGGGAGGCTGACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp AGCCTAGCCCTCCCCAGGCAAAGTTGGCAGATGAGTGGCAGAGTTGGACCCGGTGTCTGTCACCCACTCTaGGAGGCTGCTCCCATCCAG +
Preference number: 4 (lower is better)
Translates to: SLALPRQSWQMSGRVGPGVCHPL*EAAPIQ
Trigger: CTGGATGGGAGCAGCCTCCCAGAGTGGGTGACAGAC...ACCGGGTCCAACTCTGCCACTCATCTGCCAACTTTGCCTGGGGAGGGCTAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000345201.6
3UTR CAA 72 bp GGGAAGTGCATCTTATCACTTGTGCTGTGGCGTTTGTaGGTGGCCGCGGGGCCGGAGCCCAAGCTGGTCAAG +
Preference number: 4 (lower is better)
Translates to: GKCILSLVLWRL*VAAGPEPKLVK
Trigger: CTTGACCAGCTTGGGCTCCGGCCCCGCGGCCACCAACAAACGCCACAGCACAAGTGATAAGATGCACTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
3UTR CAA 72 bp TCTCGAGTCACCCGGGCAAAATGCAGGGTCCCAGCGTaGTCTGTCACCCACTCTGGGAGGCTGCTCCCATCT +
Preference number: 4 (lower is better)
Translates to: SRVTRAKCRVPA*SVTHSGRLLPS
Trigger: AGATGGGAGCAGCCTCCCAGAGTGGGTGACAGACAACGCTGGGACCCTGCATTTTGCCCGGGTGACTCGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR TCA 90 bp GAGGTGGCAGGGAAAACTGCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCTGTGGCAACGAAGTGTaGCCTGGGTCTGTGGCTGGA +
Preference number: 4 (lower is better)
Translates to: EVAGKTAQLKALVAQFGSCGNEV*PGSVAG
Trigger: TCCAGCCACAGACCCAGGTCACACTTCGTTGCCACA...GGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCCACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR TCA 90 bp CAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCGTGTGGCTTCCAGGATaGTGGGTGGGCCCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: QEDRDLAHHAVSFPLEMSVWLPG*WVGPSA
Trigger: GGCAGAGGGGCCCACCCATCATCCTGGAAGCCACAC...GGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR TCA 90 bp CCAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCGTGTGGCTTCCAGGATaGTGGGTGGGCCCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: PGGQGSCPSCCELPSRDVVWLPG*WVGPSA
Trigger: GGCAGAGGGGCCCACCCATCATCCTGGAAGCCACAC...GACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR TCA 90 bp ATGCCCACCCACCCCACGCTGCAATTACATATAAAAGCCGCCCGTGGTGCATACACATCCTGTCTCCGCTaGCCAGCCAGGTTGGCCGCG +
Preference number: 4 (lower is better)
Translates to: MPTHPTLQLHIKAARGAYTSCLR*PARLAA
Trigger: CGCGGCCAACCTGGCTGGTCAGCGGAGACAGGATGT...GTATGCACCACGGGCGGCTTTTATATGTAATTGCAGCGTGGGGTGGGTGGGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR TCA 90 bp CCAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCACATCCTGTCTCCGCTaGCCAGCCAGGTTGGCCGCG +
Preference number: 4 (lower is better)
Translates to: PGGQGSCPSCCELPSRDVTSCLR*PARLAA
Trigger: CGCGGCCAACCTGGCTGGTCAGCGGAGACAGGATGT...GACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR TCA 90 bp GATGTAGGCCACAGCGGCACCCACCGACAACCCAATGGTCTGGATCATCTTGTAACATCCTGTCTCCGCTaGCCAGCCAGGTTGGCCGCG +
Preference number: 4 (lower is better)
Translates to: DVGHSGTHRQPNGLDHLVTSCLR*PARLAA
Trigger: CGCGGCCAACCTGGCTGGTCAGCGGAGACAGGATGT...TACAAGATGATCCAGACCATTGGGTTGTCGGTGGGTGCCGCTGTGGCCTACATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR TCA 90 bp CAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCACATCCTGTCTCCGCTaGCCAGCCAGGTTGGCCGCG +
Preference number: 4 (lower is better)
Translates to: QEDRDLAHHAVSFPLEMSTSCLR*PARLAA
Trigger: CGCGGCCAACCTGGCTGGTCAGCGGAGACAGGATGT...GGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR TCA 90 bp CCTGCTCAGACCTCAGCAATGCCTGTTGCACTAGGGCAGGGGCCTCAGGGCCCAGCAAGGTCCCATTCTTaGAGACCTCGAACCGTGAGT +
Preference number: 4 (lower is better)
Translates to: PAQTSAMPVALGQGPQGPARSHS*RPRTVS
Trigger: ACTCACGGTTCGAGGTCTTCAAGAATGGGACCTTGC...TGGGCCCTGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAGGTCTGAGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR TCA 90 bp TGGGGTCCAGGATGCGGTCCTTGCCTTTCCACTGAATCAGCGGCTTGGGGTCCCACACCTCCACGCTGTTaGTGCGCAAGGTCCCATTCT +
Preference number: 4 (lower is better)
Translates to: WGPGCGPCLSTESAAWGPTPPRC*CARSHS
Trigger: AGAATGGGACCTTGCGCATCAACAGCGTGGAGGTGT...GGGACCCCAAGCCGCTGATTCAGTGGAAAGGCAAGGACCGCATCCTGGACCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR TCA 90 bp GGTGGCAGGGAAAACTGCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGGGCCTCCGTGTGCTTaGTGTTGCAGCTGTTGCCTG +
Preference number: 4 (lower is better)
Translates to: GGRENCPAQSPSRPVWVQGPPCA*CCSCCL
Trigger: CAGGCAACAGCTGCAACATCAAGCACACGGAGGCCC...TTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000470019.5
CDS-3UTR TCA 90 bp CCAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCGGCCCAGCACGGCAATaGTGTAGGCCACAGCGGCAC +
Preference number: 4 (lower is better)
Translates to: PGGQGSCPSCCELPSRDVGPARQ*CRPQRH
Trigger: GTGCCGCTGTGGCCTACATCATTGCCGTGCTGGGCC...GACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR TCA 90 bp TGCTCAGACCTCAGCAATGCCTGTTGCACTAGGGCAGGGGCCTCAGGGCCCAGGCCTTCTGCTTGGTGCTaGGGGGCTGTGACTTCAATT +
Preference number: 4 (lower is better)
Translates to: CSDLSNACCTRAGASGPRPSAWC*GAVTSI
Trigger: AATTGAAGTCACAGCCCCTCAGCACCAAGCAGAAGG...CCTGGGCCCTGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAGGTCTGAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000489707.5
CDS-3UTR TCA 90 bp GGTGGCAGGGAAAACTGCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAACTTGTCTCTGGGCACTaGCCAGGCAGTTACGCGCAG +
Preference number: 4 (lower is better)
Translates to: GGRENCPAQSPSRPVWVQLVSGH*PGSYAQ
Trigger: CTGCGCGTAACTGCCTGGTCAGTGCCCAGAGACAAG...TTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR TCA 90 bp TCTTGGATCTCTGCTGAGGGCTGCCCGTTCTGCAAAGGCCCACCGTTGAGGCATCTTGTCTCTGGGCACTaGCCAGGCAGTTACGCGCAG +
Preference number: 4 (lower is better)
Translates to: SWISAEGCPFCKGPPLRHLVSGH*PGSYAQ
Trigger: CTGCGCGTAACTGCCTGGTCAGTGCCCAGAGACAAG...ATGCCTCAACGGTGGGCCTTTGCAGAACGGGCAGCCCTCAGCAGAGATCCAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR TCA 90 bp ATGCCCACCCACCCCACGCTGCAATTACATATAAAAGCCGCCCGTGGTGCATACGGGCAGCCCTCGGGCTaGGGAAGTCTAGCCTTCCCA +
Preference number: 4 (lower is better)
Translates to: MPTHPTLQLHIKAARGAYGQPSG*GSLAFP
Trigger: TGGGAAGGCTAGACTTCCTCAGCCCGAGGGCTGCCC...GTATGCACCACGGGCGGCTTTTATATGTAATTGCAGCGTGGGGTGGGTGGGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR TCA 90 bp TTCAGCTTCCCAAACATCTCCAACTCCCTCCGGAAGTCCAGCTGCTGCTGCTCAGGGCAGCCCTCGGGCTaGGGAAGTCTAGCCTTCCCA +
Preference number: 4 (lower is better)
Translates to: FSFPNISNSLRKSSCCCSGQPSG*GSLAFP
Trigger: TGGGAAGGCTAGACTTCCTCAGCCCGAGGGCTGCCC...TGAGCAGCAGCAGCTGGACTTCCGGAGGGAGTTGGAGATGTTTGGGAAGCTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR TCA 90 bp CCAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCGGGCAGCCCTCGGGCTaGGGAAGTCTAGCCTTCCCA +
Preference number: 4 (lower is better)
Translates to: PGGQGSCPSCCELPSRDVGQPSG*GSLAFP
Trigger: TGGGAAGGCTAGACTTCCTCAGCCCGAGGGCTGCCC...GACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR TCA 90 bp TCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTCCTCTATAATCTGCCCAGGCCATCCTaGGCGGGCTCCCTCCTCACG +
Preference number: 4 (lower is better)
Translates to: SVCTSPEWGGLTCCVLYNLPRPS*AGSLLT
Trigger: CGTGAGGAGGGAGCCCGCTCAGGATGGCCTGGGCAG...ATTATAGAGGACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR TCA 90 bp TTGTGCTGTGGCGTTTGTTGGTGGCCGCGGGGCCGGAGCCCAAGCTGGTCAAGGGTCAAGGGGAGAAGTTaGAGGCCAGAAATTGGGGTT +
Preference number: 4 (lower is better)
Translates to: LCCGVCWWPRGRSPSWSRVKGRS*RPEIGV
Trigger: AACCCCAATTTCTGGCCTTCAACTTCTCCCCTTGAC...CCTTGACCAGCTTGGGCTCCGGCCCCGCGGCCACCAACAAACGCCACAGCACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR TCA 90 bp GGAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTGGCAAAGTTGGCAGATaGGTGGCAGAGTTGGACCCG +
Preference number: 4 (lower is better)
Translates to: GRRGSGSVCTSPEWGGLTGKVGR*VAELDP
Trigger: CGGGTCCAACTCTGCCACTCATCTGCCAACTTTGCC...AGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR TCA 90 bp GTGGGGAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTGCCAGGCACTTAGGATaGGGAAAGGAGAGAAGGGTG +
Preference number: 4 (lower is better)
Translates to: VGKTWVWVSVHKPRVGRTARHLG*GKERRV
Trigger: CACCCTTCTCTCCTTTCCTCATCCTAAGTGCCTGGC...AGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTCCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR TCA 90 bp GACCGTGGGAAGTGCATCTTATCACTTGTGCTGTGGCGTTTGTTGGTGGCCGCGCCCTCCTCCAAGCCCTaGGCCTTTGCCAGGAACACC +
Preference number: 4 (lower is better)
Translates to: DRGKCILSLVLWRLLVAAPSSKP*AFARNT
Trigger: GGTGTTCCTGGCAAAGGCTCAGGGCTTGGAGGAGGG...CGCGGCCACCAACAAACGCCACAGCACAAGTGATAAGATGCACTTCCCACGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
CDS-3UTR TCA 90 bp TGCTCAGACCTCAGCAATGCCTGTTGCACTAGGGCAGGGGCCTCAGGGCCCAGGTCCTCAGGAACTGCTTaGGGTCTCCCAGATCCACAT +
Preference number: 4 (lower is better)
Translates to: CSDLSNACCTRAGASGPRSSGTA*GLPDPH
Trigger: ATGTGGATCTGGGAGACCTCAAGCAGTTCCTGAGGA...CCTGGGCCCTGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAGGTCTGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp TCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTCCTCTATAATAGCGCCCGGCGCCCCTaGAGTGCATCCTGGGAGGAC +
Preference number: 4 (lower is better)
Translates to: SVCTSPEWGGLTCCVLYNSARRP*SASWED
Trigger: GTCCTCCCAGGATGCACTGCAGGGGCGCCGGGCGCT...ATTATAGAGGACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp CAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTCAGCCTCCCAAAGGATGCAAAGCTCAGGCTGCTaGCCTGGGCGAAACGCCGCT +
Preference number: 4 (lower is better)
Translates to: QLKALVAQFGSKSASQRMQSSGC*PGRNAA
Trigger: AGCGGCGTTTCGCCCAGGGCAGCAGCCTGAGCTTTG...CATCCTTTGGGAGGCTGACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp AAGTCTGACACTTGGCCAAGGGCTCGGCCGCCCTTTCCATTTGCACAAGCATGCCAAAGCTCAGGCTGCTaGCCTGGGCGAAACGCCGCT +
Preference number: 4 (lower is better)
Translates to: KSDTWPRARPPFPFAQACQSSGC*PGRNAA
Trigger: AGCGGCGTTTCGCCCAGGGCAGCAGCCTGAGCTTTG...GCATGCTTGTGCAAATGGAAAGGGCGGCCGAGCCCTTGGCCAAGTGTCAGACTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476760.1
CDS-3UTR GCA 90 bp AGGTCAAGTCTGACACTTGGCCAAGGGCTCGGCCGCCCTTTCCATTTGCACAAGCAGCCGGTCCACAGCTaGAAAGCTCAGGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: RSSLTLGQGLGRPFHLHKQPVHS*KAQAAA
Trigger: GGCAGCAGCCTGAGCTTTGCAGCTGTGGACCGGCTG...CTTGTGCAAATGGAAAGGGCGGCCGAGCCCTTGGCCAAGTGTCAGACTTGACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476760.1
CDS-3UTR GCA 90 bp AGGCTGAGGCTGGGGCTACAGTTACCAGATACTAAGTGCCTGCCTGGTCCCTGGAAGGTGCCAGAGTCCTaGAGCCGGTCCACAGCTGCA +
Preference number: 4 (lower is better)
Translates to: RLRLGLQLPDTKCLPGPWKVPES*SRSTAA
Trigger: TGCAGCTGTGGACCGGCTGCAGGACTCTGGCACCTT...CCAGGGACCAGGCAGGCACTTAGTATCTGGTAACTGTAGCCCCAGCCTCAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476760.1
CDS-3UTR GCA 90 bp GGTGGCAGGGAAAACTGCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAACCACACACTGGAAGGTaGCAGAGTCCTGCAGCCGGT +
Preference number: 4 (lower is better)
Translates to: GGRENCPAQSPSRPVWVQPHTGR*QSPAAG
Trigger: ACCGGCTGCAGGACTCTGGCACCTTCCAGTGTGTGG...TTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp TGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTCCACACACTGGAAGGTaGCAGAGTCCTGCAGCCGGT +
Preference number: 4 (lower is better)
Translates to: WVWVSVHKPRVGRTHLLCPHTGR*QSPAAG
Trigger: ACCGGCTGCAGGACTCTGGCACCTTCCAGTGTGTGG...ACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp CCTCGGGGGACATCCAGCGCAGCGGCACCCAGGCCTGGCGGAAGTGGTAGTACTCAGGACCACAGGACCTaGCTCAATCCATTTGATGTT +
Preference number: 4 (lower is better)
Translates to: PRGTSSAAAPRPGGSGSTQDHRT*LNPFDV
Trigger: AACATCAAATGGATTGAGGCAGGTCCTGTGGTCCTG...AGTACTACCACTTCCGCCAGGCCTGGGTGCCGCTGCGCTGGATGTCCCCCGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR GCA 90 bp GCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTCAGCCTCCCAAAGGGCTTCCGAGGCTGGATaGTTCAGGACCACAGGACCT +
Preference number: 4 (lower is better)
Translates to: AQLKALVAQFGSKSASQRASEAG*FRTTGP
Trigger: AGGTCCTGTGGTCCTGAAGCATCCAGCCTCGGAAGC...CCTTTGGGAGGCTGACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp AGCCTAGCCCTCCCCAGGCAAAGTTGGCAGATGAGTGGCAGAGTTGGACCCGGTGAATACAGCCCACTATaGTCAGGACCAGCTGGCCGG +
Preference number: 4 (lower is better)
Translates to: SLALPRQSWQMSGRVGPGEYSPL*SGPAGR
Trigger: CCGGCCAGCTGGTCCTGAGCATAGTGGGCTGTATTC...ACCGGGTCCAACTCTGCCACTCATCTGCCAACTTTGCCTGGGGAGGGCTAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
CDS-3UTR GCA 90 bp GAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTTACCACGTCCTGGGGTaGCAGCACCACCCTGGCAAA +
Preference number: 4 (lower is better)
Translates to: EDVGLGQCAQAQSGEDSLYHVLG*QHHPGK
Trigger: TTTGCCAGGGTGGTGCTGGCACCCCAGGACGTGGTA...AAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp GTTGCCCGGGCTGAAGAGCAACGGTGCGATCTCAGCTCATTGCAACCTCTGCCTTACCACGTCCTGGGGTaGCAGCACCACCCTGGCAAA +
Preference number: 4 (lower is better)
Translates to: VARAEEQRCDLSSLQPLPYHVLG*QHHPGK
Trigger: TTTGCCAGGGTGGTGCTGGCACCCCAGGACGTGGTA...AGGCAGAGGTTGCAATGAGCTGAGATCGCACCGTTGCTCTTCAGCCCGGGCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471863.5
CDS-3UTR GCA 90 bp GGTGGCAGGGAAAACTGCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGGTAGATCCCTGCATTaGGTGGCCGGACCTGGGTCA +
Preference number: 4 (lower is better)
Translates to: GGRENCPAQSPSRPVWVQGRSLH*VAGPGS
Trigger: TGACCCAGGTCCGGCCACGCAATGCAGGGATCTACC...TTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp CAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTCAGCCTCCCAAAGGATGGCAGCGGTAGATCCCTaGATTGCGTGGCCGGACCTG +
Preference number: 4 (lower is better)
Translates to: QLKALVAQFGSKSASQRMAAVDP*IAWPDL
Trigger: CAGGTCCGGCCACGCAATGCAGGGATCTACCGCTGC...CATCCTTTGGGAGGCTGACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp CAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCGCAGCGGTAGATCCCTaGATTGCGTGGCCGGACCTG +
Preference number: 4 (lower is better)
Translates to: QGSCPSCCELPSRDVLPCAAVDP*IAWPDL
Trigger: CAGGTCCGGCCACGCAATGCAGGGATCTACCGCTGC...GCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR GCA 90 bp GGAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTCTGCCCCTGGCCAATaGAGCGGTAGATCCCTGCAT +
Preference number: 4 (lower is better)
Translates to: GRRGSGSVCTSPEWGGLTSAPGQ*SGRSLH
Trigger: ATGCAGGGATCTACCGCTGCATTGGCCAGGGGCAGA...AGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp TGCCAGTACTTCATCATCTGCCTGCCCACCATGGGGCATCTCTCCATGTGTAAAAGCCGGACTCCCGCGTaGTCCCACCACACGCTGGGC +
Preference number: 4 (lower is better)
Translates to: CQYFIICLPTMGHLSMCKSRTPA*SHHTLG
Trigger: GCCCAGCGTGTGGTGGGAGCACGCGGGAGTCCGGCT...TTTACACATGGAGAGATGCCCCATGGTGGGCAGGCAGATGATGAAGTACTGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR GCA 90 bp AGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCCCCTTCTGGTAGACCCTaGCATGGGTGGGCAGCCGGA +
Preference number: 4 (lower is better)
Translates to: RDLAHHAVSFPLEMSSPAPSGRP*HGWAAG
Trigger: TCCGGCTGCCCACCCATGGCAGGGTCTACCAGAAGG...GGCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR GCA 90 bp GTCACTATTTCCTCTGGAGCACCCACCCTAACCCCTGTGCCTGGCTCTCTACTGCCTTCTGGTAGACCCTaGCATGGGTGGGCAGCCGGA +
Preference number: 4 (lower is better)
Translates to: VTISSGAPTLTPVPGSLLPSGRP*HGWAAG
Trigger: TCCGGCTGCCCACCCATGGCAGGGTCTACCAGAAGG...CAGTAGAGAGCCAGGCACAGGGGTTAGGGTGGGTGCTCCAGAGGAAATAGTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471863.5
CDS-3UTR GCA 90 bp GGCAGGGAAAACTGCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTCCCAAGTAGCCGGGTTTaGCCTCCTCCAGCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: GRENCPAQSPSRPVWVQVPSSRV*PPPAGC
Trigger: ACAGCCAGCTGGAGGAGGGCAAACCCGGCTACTTGG...GACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp GGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCTTGCGCCTCGATGCTaGCGGCTGGGGTGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: GGQGSCPSCCELPSRDVLLAPRC*RLGCCS
Trigger: TGAGCAGCACCCCAGCCGGCAGCATCGAGGCGCAAG...GAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR GCA 90 bp GTGGGGAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTGCCCGTTGGAGGCAATaGAAGTGTAGTTGCCAGCGT +
Preference number: 4 (lower is better)
Translates to: VGKTWVWVSVHKPRVGRTARWRQ*KCSCQR
Trigger: ACGCTGGCAACTACACTTGCATTGCCTCCAACGGGC...AGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTCCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp AGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCCGCACGAATCTGGCCCTaGGGCCCGTTGGAGGCAATG +
Preference number: 4 (lower is better)
Translates to: RDLAHHAVSFPLEMSSPAARIWP*GPLEAM
Trigger: CATTGCCTCCAACGGGCCGCAGGGCCAGATTCGTGC...GGCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR GCA 90 bp TCTTATCACTTGTGCTGTGGCGTTTGTTGGTGGCCGCGGGGCCGGAGCCCAAGCCCAGGATGCGGTCCTTaGCTTTCCACTGAATCAGCG +
Preference number: 4 (lower is better)
Translates to: SYHLCCGVCWWPRGRSPSPGCGP*LSTESA
Trigger: CGCTGATTCAGTGGAAAGGCAAGGACCGCATCCTGG...GCTTGGGCTCCGGCCCCGCGGCCACCAACAAACGCCACAGCACAAGTGATAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR GCA 90 bp CCTGCTCAGACCTCAGCAATGCCTGTTGCACTAGGGCAGGGGCCTCAGGGCCCACCATTCTGGAAGATGTaGATCCTGGGTCCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: PAQTSAMPVALGQGPQGPPFWKM*ILGPSL
Trigger: CAAGCTGGGACCCAGGATGCACATCTTCCAGAATGG...TGGGCCCTGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAGGTCTGAGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000470019.5
CDS-3UTR GCA 90 bp TGCTCCATGCCCAGGGCTACCTGGGTGCATAGGGCCACCTTCTGCTTGGTGCTGAGCTGTTGCCTGCAATaGAGGTGTAGCGGCCTGAGT +
Preference number: 4 (lower is better)
Translates to: CSMPRATWVHRATFCLVLSCCLQ*RCSGLS
Trigger: ACTCAGGCCGCTACACCTGCATTGCAGGCAACAGCT...CAGCACCAAGCAGAAGGTGGCCCTATGCACCCAGGTAGCCCTGGGCATGGAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR GCA 90 bp GTTTGTTGGTGGCCGCGGGGCCGGAGCCCAAGCTGGTCAAGGCCACTTCTTCTTGCAGCCGCTTGGCTTTaGAGCGCTTCTTGCAGTAGA +
Preference number: 4 (lower is better)
Translates to: VCWWPRGRSPSWSRPLLLAAAWL*SASCSR
Trigger: TCTACTGCAAGAAGCGCTGCAAAGCCAAGCGGCTGC...AAGAAGAAGTGGCCTTGACCAGCTTGGGCTCCGGCCCCGCGGCCACCAACAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
CDS-3UTR GCA 90 bp GCCCAGCACGGCAATGATGTAGGCCACAGCGGCACCCACCGACAACCCAATGGTGCAGCCGCTTGGCTTTaGAGCGCTTCTTGCAGTAGA +
Preference number: 4 (lower is better)
Translates to: AQHGNDVGHSGTHRQPNGAAAWL*SASCSR
Trigger: TCTACTGCAAGAAGCGCTGCAAAGCCAAGCGGCTGC...ACCATTGGGTTGTCGGTGGGTGCCGCTGTGGCCTACATCATTGCCGTGCTGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
CDS-3UTR GCA 90 bp GCCAGGAACACCTCCCCAAACTCACTCTTCCCCAGCGTGGTGATGGGCTGCAGGGCAGCCGCTTGGCTTTaGAGCGCTTCTTGCAGTAGA +
Preference number: 4 (lower is better)
Translates to: ARNTSPNSLFPSVVMGCRAAAWL*SASCSR
Trigger: TCTACTGCAAGAAGCGCTGCAAAGCCAAGCGGCTGC...CCTGCAGCCCATCACCACGCTGGGGAAGAGTGAGTTTGGGGAGGTGTTCCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
CDS-3UTR GCA 90 bp GCGCTTCTTGCAGTAGAACATGAGGCCCAGCACGGCAATGATGTAGGCCACAGCCCCTCGGGCTGCTTCTaGAGCCGCTTGGCTTTGCAG +
Preference number: 4 (lower is better)
Translates to: ALLAVEHEAQHGNDVGHSPSGCF*SRLALQ
Trigger: CTGCAAAGCCAAGCGGCTGCAGAAGCAGCCCGAGGG...GCTGTGGCCTACATCATTGCCGTGCTGGGCCTCATGTTCTACTGCAAGAAGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
CDS-3UTR GCA 90 bp GGCAGTTACGCGCAGCCAAGTCCTTATGCACAAAGCGGTTGTTGGACAGGTGCTTCCTCGCCCTCGGGCTaGTTCTGCAGCCGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: GSYAQPSPYAQSGCWTGASSPSG*FCSRLA
Trigger: AGCCAAGCGGCTGCAGAAGCAGCCCGAGGGCGAGGA...AGCACCTGTCCAACAACCGCTTTGTGCATAAGGACTTGGCTGCGCGTAACTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR GCA 90 bp CAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCTCGCCCTCGGGCTaGTTCTGCAGCCGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: QEDRDLAHHAVSFPLEMSSSPSG*FCSRLA
Trigger: AGCCAAGCGGCTGCAGAAGCAGCCCGAGGGCGAGGA...GGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR GCA 90 bp GGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCTCCTCGCCCTCGGGCTaGTTCTGCAGCCGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: GGQGSCPSCCELPSRDVLSSPSG*FCSRLA
Trigger: AGCCAAGCGGCTGCAGAAGCAGCCCGAGGGCGAGGA...GAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR GCA 90 bp CTTATGCACAAAGCGGTTGTTGGACAGGTGCTCCATGCCCAGGGCTACCTGGGTGAGGGCTGCCCGTTCTaGAAAGGCCCACCGTTGAGG +
Preference number: 4 (lower is better)
Translates to: LMHKAVVGQVLHAQGYLGEGCPF*KGPPLR
Trigger: CCTCAACGGTGGGCCTTTGCAGAACGGGCAGCCCTC...ACCCAGGTAGCCCTGGGCATGGAGCACCTGTCCAACAACCGCTTTGTGCATAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR GCA 90 bp CAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCGAGGGCTGCCCGTTCTaGAAAGGCCCACCGTTGAGG +
Preference number: 4 (lower is better)
Translates to: QGSCPSCCELPSRDVLPCEGCPF*KGPPLR
Trigger: CCTCAACGGTGGGCCTTTGCAGAACGGGCAGCCCTC...GCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR GCA 90 bp GCAGTAGAACATGAGGCCCAGCACGGCAATGATGTAGGCCACAGCGGCACCCACATCTCTGCTGAGGGCTaGCCGTTCTGCAAAGGCCCA +
Preference number: 4 (lower is better)
Translates to: AVEHEAQHGNDVGHSGTHISAEG*PFCKGP
Trigger: TGGGCCTTTGCAGAACGGGCAGCCCTCAGCAGAGAT...GTGGGTGCCGCTGTGGCCTACATCATTGCCGTGCTGGGCCTCATGTTCTACTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
CDS-3UTR GCA 90 bp CTGCATCAGCCGATAGAGTTTGGAAGGGCAGCCCTCGGGCTGAGGAAGTCTAGCAGCGTGGTGATGGGCTaGAGGCTAGACCGTGGGAAG +
Preference number: 4 (lower is better)
Translates to: LHQPIEFGRAALGLRKSSSVVMG*RLDRGK
Trigger: CTTCCCACGGTCTAGCCTGCAGCCCATCACCACGCT...GCTAGACTTCCTCAGCCCGAGGGCTGCCCTTCCAAACTCTATCGGCTGATGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
CDS-3UTR GCA 90 bp GAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTCGGTTGTTGGACAGGTaGTCCATGCCCAGGGCTACC +
Preference number: 4 (lower is better)
Translates to: EDVGLGQCAQAQSGEDSLRLLDR*SMPRAT
Trigger: GGTAGCCCTGGGCATGGAGCACCTGTCCAACAACCG...AAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp TGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTCGGTTGTTGGACAGGTaGTCCATGCCCAGGGCTACC +
Preference number: 4 (lower is better)
Translates to: WVWVSVHKPRVGRTHLLCRLLDR*SMPRAT
Trigger: GGTAGCCCTGGGCATGGAGCACCTGTCCAACAACCG...ACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp GAAGTGCATCTTATCACTTGTGCTGTGGCGTTTGTTGGTGGCCGCGGGGCCGGACGGTTGTTGGACAGGTaGTCCATGCCCAGGGCTACC +
Preference number: 4 (lower is better)
Translates to: EVHLITCAVAFVGGRGAGRLLDR*SMPRAT
Trigger: GGTAGCCCTGGGCATGGAGCACCTGTCCAACAACCG...TCCGGCCCCGCGGCCACCAACAAACGCCACAGCACAAGTGATAAGATGCACTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR GCA 90 bp CCTGCTCAGACCTCAGCAATGCCTGTTGCACTAGGGCAGGGGCCTCAGGGCCCACAGTACTTCATCATCTaGCTGCCCACCATGGGGCAT +
Preference number: 4 (lower is better)
Translates to: PAQTSAMPVALGQGPQGPQYFII*LPTMGH
Trigger: ATGCCCCATGGTGGGCAGGCAGATGATGAAGTACTG...TGGGCCCTGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAGGTCTGAGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp TGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTTCCCTCCTCACGGCTTaGTGTCCACGGTGCTGTCTC +
Preference number: 4 (lower is better)
Translates to: WVWVSVHKPRVGRTHLLCSLLTA*CPRCCL
Trigger: GAGACAGCACCGTGGACAGCAAGCCGTGAGGAGGGA...ACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp CCTGCTCAGACCTCAGCAATGCCTGTTGCACTAGGGCAGGGGCCTCAGGGCCCAGGAGGACAGGGATCTTaGCCATCATGCTGTGAGCTT +
Preference number: 4 (lower is better)
Translates to: PAQTSAMPVALGQGPQGPGGQGS*PSCCEL
Trigger: AAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCC...TGGGCCCTGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAGGTCTGAGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp AGCCTAGCCCTCCCCAGGCAAAGTTGGCAGATGAGTGGCAGAGTTGGACCCGGTCTCAGCAATGCCTGTTaGACTAGGGCAGGGGCCTCA +
Preference number: 4 (lower is better)
Translates to: SLALPRQSWQMSGRVGPGLSNAC*TRAGAS
Trigger: TGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAG...ACCGGGTCCAACTCTGCCACTCATCTGCCAACTTTGCCTGGGGAGGGCTAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp AGCCTAGCCCTCCCCAGGCAAAGTTGGCAGATGAGTGGCAGAGTTGGACCCGGTAAGTACCAGGGTCTCTaGCACTCCCTCCTCCAAGCC +
Preference number: 4 (lower is better)
Translates to: SLALPRQSWQMSGRVGPGKYQGL*HSLLQA
Trigger: GGCTTGGAGGAGGGAGTGGCAGAGACCCTGGTACTT...ACCGGGTCCAACTCTGCCACTCATCTGCCAACTTTGCCTGGGGAGGGCTAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp GCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTCAGCCTCCCAAAGGAAGTACCAGGGTCTCTaGCACTCCCTCCTCCAAGCC +
Preference number: 4 (lower is better)
Translates to: AQLKALVAQFGSKSASQRKYQGL*HSLLQA
Trigger: GGCTTGGAGGAGGGAGTGGCAGAGACCCTGGTACTT...CCTTTGGGAGGCTGACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp ATCTTATCACTTGTGCTGTGGCGTTTGTTGGTGGCCGCGGGGCCGGAGCCCAAGAAGTACCAGGGTCTCTaGCACTCCCTCCTCCAAGCC +
Preference number: 4 (lower is better)
Translates to: ILSLVLWRLLVAAGPEPKKYQGL*HSLLQA
Trigger: GGCTTGGAGGAGGGAGTGGCAGAGACCCTGGTACTT...CTTGGGCTCCGGCCCCGCGGCCACCAACAAACGCCACAGCACAAGTGATAAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470019.5
ENST00000497957.1
CDS-3UTR GCA 90 bp AGGCCCTGCTCAGACCTCAGCAATGCCTGTTGCACTAGGGCAGGGGCCTCAGGGGCTGCTGCTCATCCTTaGTCTGCAGGCTCTTCACAA +
Preference number: 4 (lower is better)
Translates to: RPCSDLSNACCTRAGASGAAAHP*SAGSSQ
Trigger: TTGTGAAGAGCCTGCAGAGCAAGGATGAGCAGCAGC...CCCTGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAGGTCTGAGCAGGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp ACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGCTCCGGAAGTCCAGCTaGTGCTGCTCATCCTTGCTC +
Preference number: 4 (lower is better)
Translates to: TWVWVSVHKPRVGRTHLLLRKSS*CCSSLL
Trigger: GAGCAAGGATGAGCAGCAGCAGCTGGACTTCCGGAG...CAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp CAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCGCTCCCCACGGTGGGTaGGGATGGTCTTTTCTCCCC +
Preference number: 4 (lower is better)
Translates to: QGSCPSCCELPSRDVLPCAPHGG*GWSFLP
Trigger: GGGGAGAAAAGACCATCCGCACCCACCGTGGGGAGC...GCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000481273.5
CDS-3UTR GCA 90 bp CAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTACCTGGGCCGACCCTaGCGGGTGGGGTGGGGAATT +
Preference number: 4 (lower is better)
Translates to: QEDRDLAHHAVSFPLEMSYLGRP*RVGWGI
Trigger: AATTCCCCACCCCACCCGGCAGGGTCGGCCCAGGTA...GGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481273.5
CDS-3UTR CCA 90 bp GAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTCCCTGCAGTGCATCCTaGGAGGACGGCTGCTTGATG +
Preference number: 4 (lower is better)
Translates to: EDVGLGQCAQAQSGEDSLPCSAS*EDGCLM
Trigger: CATCAAGCAGCCGTCCTCCCAGGATGCACTGCAGGG...AAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp GGTGGCAGGGAAAACTGCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAACCCTGCAGTGCATCCTaGGAGGACGGCTGCTTGATG +
Preference number: 4 (lower is better)
Translates to: GGRENCPAQSPSRPVWVQPCSAS*EDGCLM
Trigger: CATCAAGCAGCCGTCCTCCCAGGATGCACTGCAGGG...TTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp CCAGAAATTGGGGTTACCTGTGGCACCCACACTGTCCCTGATAGAGGAAGAGGTCTCAGGCTGCTGCCCTaGGCGAAACGCCGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: PEIGVTCGTHTVPDRGRGLRLLP*AKRRSV
Trigger: CACGGAGCGGCGTTTCGCCCAGGGCAGCAGCCTGAG...ACCTCTTCCTCTATCAGGGACAGTGTGGGTGCCACAGGTAACCCCAATTTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp ATCTGCCTGCCCACCATGGGGCATCTCTCCATGTGTAAACACTTCCCACATCAGCTCAGGCTGCTGCCCTaGGCGAAACGCCGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: ICLPTMGHLSMCKHFPHQLRLLP*AKRRSV
Trigger: CACGGAGCGGCGTTTCGCCCAGGGCAGCAGCCTGAG...CTGATGTGGGAAGTGTTTACACATGGAGAGATGCCCCATGGTGGGCAGGCAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR CCA 90 bp GTGGGGAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTTGTGACCTGGGTCTGTaGCTGGATCTCAGCTTCCGA +
Preference number: 4 (lower is better)
Translates to: VGKTWVWVSVHKPRVGRTCDLGL*LDLSFR
Trigger: TCGGAAGCTGAGATCCAGCCACAGACCCAGGTCACA...AGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTCCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp AGCCTAGCCCTCCCCAGGCAAAGTTGGCAGATGAGTGGCAGAGTTGGACCCGGTGGCTGGGCTGAGAACTaGCAATGGAACATGGCCTCC +
Preference number: 4 (lower is better)
Translates to: SLALPRQSWQMSGRVGPGGWAEN*QWNMAS
Trigger: GGAGGCCATGTTCCATTGCCAGTTCTCAGCCCAGCC...ACCGGGTCCAACTCTGCCACTCATCTGCCAACTTTGCCTGGGGAGGGCTAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp GGAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTGGCTGGGCTGAGAACTaGCAATGGAACATGGCCTCC +
Preference number: 4 (lower is better)
Translates to: GRRGSGSVCTSPEWGGLTGWAEN*QWNMAS
Trigger: GGAGGCCATGTTCCATTGCCAGTTCTCAGCCCAGCC...AGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp CAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCAGGCTCGGGGGTGGCTaGGCTGAGAACTGGCAATGG +
Preference number: 4 (lower is better)
Translates to: QGSCPSCCELPSRDVLPCRLGGG*AENWQW
Trigger: CCATTGCCAGTTCTCAGCCCAGCCACCCCCGAGCCT...GCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CCA 90 bp CCAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCGGCTCTGCGGAGGTGTaGGGGGCGACTGCGGTTAGT +
Preference number: 4 (lower is better)
Translates to: PGGQGSCPSCCELPSRDVGSAEV*GATAVS
Trigger: ACTAACCGCAGTCGCCCCCCACACCTCCGCAGAGCC...GACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CCA 90 bp CAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTTGCGTGGCCGGACCTaGGTCAGCAGCAGAGACCCG +
Preference number: 4 (lower is better)
Translates to: QEDRDLAHHAVSFPLEMSLRGRT*VSSRDP
Trigger: CGGGTCTCTGCTGCTGACCCAGGTCCGGCCACGCAA...GGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CCA 90 bp ACGCGCAGCCAAGTCCTTATGCACAAAGCGGTTGTTGGACAGGTGCTCCATGCCGATCCCTGCATTGCGTaGCCGGACCTGGGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: TRSQVLMHKAVVGQVLHADPCIA*PDLGQQ
Trigger: CTGCTGACCCAGGTCCGGCCACGCAATGCAGGGATC...GGCATGGAGCACCTGTCCAACAACCGCTTTGTGCATAAGGACTTGGCTGCGCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR CCA 90 bp CAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTCAGCCTCCCAAAGGATGGATCCCTGCATTGCGTaGCCGGACCTGGGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: QLKALVAQFGSKSASQRMDPCIA*PDLGQQ
Trigger: CTGCTGACCCAGGTCCGGCCACGCAATGCAGGGATC...CATCCTTTGGGAGGCTGACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp TCTGTGAGGGCTGTCACTATTTCCTCTGGAGCACCCACCCTAACCCCTGTGCCTGATCCCTGCATTGCGTaGCCGGACCTGGGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: SVRAVTISSGAPTLTPVPDPCIA*PDLGQQ
Trigger: CTGCTGACCCAGGTCCGGCCACGCAATGCAGGGATC...AGGCACAGGGGTTAGGGTGGGTGCTCCAGAGGAAATAGTGACAGCCCTCACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471863.5
CDS-3UTR CCA 90 bp ACGCGCAGCCAAGTCCTTATGCACAAAGCGGTTGTTGGACAGGTGCTCCATGCCGCTCTGGCAGACCCTTaGGGGGAAGGCAGGTCACAC +
Preference number: 4 (lower is better)
Translates to: TRSQVLMHKAVVGQVLHAALADP*GEGRSH
Trigger: GTGTGACCTGCCTTCCCCCCAAGGGTCTGCCAGAGC...GGCATGGAGCACCTGTCCAACAACCGCTTTGTGCATAAGGACTTGGCTGCGCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR CCA 90 bp TCTGTGAGGGCTGTCACTATTTCCTCTGGAGCACCCACCCTAACCCCTGTGCCTGCTCTGGCAGACCCTTaGGGGGAAGGCAGGTCACAC +
Preference number: 4 (lower is better)
Translates to: SVRAVTISSGAPTLTPVPALADP*GEGRSH
Trigger: GTGTGACCTGCCTTCCCCCCAAGGGTCTGCCAGAGC...AGGCACAGGGGTTAGGGTGGGTGCTCCAGAGGAAATAGTGACAGCCCTCACAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471863.5
CDS-3UTR CCA 90 bp AGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCCGCTCTGGCAGACCCTTaGGGGGAAGGCAGGTCACAC +
Preference number: 4 (lower is better)
Translates to: RDLAHHAVSFPLEMSSPAALADP*GEGRSH
Trigger: GTGTGACCTGCCTTCCCCCCAAGGGTCTGCCAGAGC...GGCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CCA 90 bp GCCTGCAAATCTGCCAGTACTTCATCATCTGCCTGCCCACCATGGGGCATCTCTGCTCCCACCACACGCTaGGCTCTGGCAGACCCTTGG +
Preference number: 4 (lower is better)
Translates to: ACKSASTSSSACPPWGISAPTTR*ALADPW
Trigger: CCAAGGGTCTGCCAGAGCCCAGCGTGTGGTGGGAGC...AGAGATGCCCCATGGTGGGCAGGCAGATGATGAAGTACTGGCAGATTTGCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR CCA 90 bp TGTGTCCTCTATAATCCTGGTCTAGACCCCCAAGTGGGACCAGTGGGCCAAGAGGCTCCCACCACACGCTaGGCTCTGGCAGACCCTTGG +
Preference number: 4 (lower is better)
Translates to: CVLYNPGLDPQVGPVGQEAPTTR*ALADPW
Trigger: CCAAGGGTCTGCCAGAGCCCAGCGTGTGGTGGGAGC...CTCTTGGCCCACTGGTCCCACTTGGGGGTCTAGACCAGGATTATAGAGGACACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp GGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCGCTCCCACCACACGCTaGGCTCTGGCAGACCCTTGG +
Preference number: 4 (lower is better)
Translates to: GGQGSCPSCCELPSRDVLAPTTR*ALADPW
Trigger: CCAAGGGTCTGCCAGAGCCCAGCGTGTGGTGGGAGC...GAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CCA 90 bp AGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCCGCTGACCAGCCAGGTTaGCCGCGTGGCAGGTGTAGA +
Preference number: 4 (lower is better)
Translates to: RDLAHHAVSFPLEMSSPAADQPG*PRGRCR
Trigger: TCTACACCTGCCACGCGGCCAACCTGGCTGGTCAGC...GGCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR CCA 90 bp TGCTCAGACCTCAGCAATGCCTGTTGCACTAGGGCAGGGGCCTCAGGGCCCAGGGACAACTGTAGGTTTTaGTGTGGCCTGGGTCAGGCA +
Preference number: 4 (lower is better)
Translates to: CSDLSNACCTRAGASGPRDNCRF*CGLGQA
Trigger: TGCCTGACCCAGGCCACACCAAAACCTACAGTTGTC...CCTGGGCCCTGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAGGTCTGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp AGGCCCTGCTCAGACCTCAGCAATGCCTGTTGCACTAGGGCAGGGGCCTCAGGGGACAACTGTAGGTTTTaGTGTGGCCTGGGTCAGGCA +
Preference number: 4 (lower is better)
Translates to: RPCSDLSNACCTRAGASGDNCRF*CGLGQA
Trigger: TGCCTGACCCAGGCCACACCAAAACCTACAGTTGTC...CCCTGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAGGTCTGAGCAGGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp CTCTGGGCACTGACCAGGCAGTTACGCGCAGCCAAGTCCTTATGCACAAAGCGGCTCGATGCTGCCGGCTaGGGTGCTGCTCATACAACG +
Preference number: 4 (lower is better)
Translates to: LWALTRQLRAAKSLCTKRLDAAG*GAAHTT
Trigger: CGTTGTATGAGCAGCACCCCAGCCGGCAGCATCGAG...CCGCTTTGTGCATAAGGACTTGGCTGCGCGTAACTGCCTGGTCAGTGCCCAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR CCA 90 bp ATCTCTGCTGAGGGCTGCCCGTTCTGCAAAGGCCCACCGTTGAGGCATTCCATCGTCTGTCACCCACTCTaGGAGGCTGCTCCCATCTGC +
Preference number: 4 (lower is better)
Translates to: ISAEGCPFCKGPPLRHSIVCHPL*EAAPIC
Trigger: GCAGATGGGAGCAGCCTCCCAGAGTGGGTGACAGAC...GATGGAATGCCTCAACGGTGGGCCTTTGCAGAACGGGCAGCCCTCAGCAGAGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR CCA 90 bp CTCTGGGCACTGACCAGGCAGTTACGCGCAGCCAAGTCCTTATGCACAAAGCGGGGCCCTGCGGCCCGTTaGAGGCAATGCAAGTGTAGT +
Preference number: 4 (lower is better)
Translates to: LWALTRQLRAAKSLCTKRGPAAR*RQCKCS
Trigger: ACTACACTTGCATTGCCTCCAACGGGCCGCAGGGCC...CCGCTTTGTGCATAAGGACTTGGCTGCGCGTAACTGCCTGGTCAGTGCCCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR CCA 90 bp GGTGGCAGGGAAAACTGCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGGCCCTGCGGCCCGTTaGAGGCAATGCAAGTGTAGT +
Preference number: 4 (lower is better)
Translates to: GGRENCPAQSPSRPVWVQGPAAR*RQCKCS
Trigger: ACTACACTTGCATTGCCTCCAACGGGCCGCAGGGCC...TTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp AGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCCACATGGGCACGAATCTaGCCCTGCGGCCCGTTGGAG +
Preference number: 4 (lower is better)
Translates to: RDLAHHAVSFPLEMSSPATWARI*PCGPLE
Trigger: CTCCAACGGGCCGCAGGGCCAGATTCGTGCCCATGT...GGCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CCA 90 bp GAGGTGGCAGGGAAAACTGCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCACAGTGAGCTGGACATaGGCACGAATCTGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: EVAGKTAQLKALVAQFGSTVSWT*ARIWPC
Trigger: GCAGGGCCAGATTCGTGCCCATGTCCAGCTCACTGT...GGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCCACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp AGGCCAGAAATTGGGGTTACCTGTGGCACCCACACTGTCCCTGATAGAGGAAGAGGCTTGGGGTCCCCCTaGGCCTCGCACTGCAGTAGG +
Preference number: 4 (lower is better)
Translates to: RPEIGVTCGTHTVPDRGRGLGSP*ASHCSR
Trigger: CCTACTGCAGTGCGAGGCCCAGGGGGACCCCAAGCC...TCTTCCTCTATCAGGGACAGTGTGGGTGCCACAGGTAACCCCAATTTCTGGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp CAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCACTGAATCAGCGGCTTaGGGTCCCCCTGGGCCTCGC +
Preference number: 4 (lower is better)
Translates to: QEDRDLAHHAVSFPLEMSTESAA*GPPGPR
Trigger: GCGAGGCCCAGGGGGACCCCAAGCCGCTGATTCAGT...GGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CCA 90 bp CAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCTGGGTCCCAGCTTGGTaGGGTCCAGGATGCGGTCCT +
Preference number: 4 (lower is better)
Translates to: QGSCPSCCELPSRDVLPCWVPAW*GPGCGP
Trigger: AGGACCGCATCCTGGACCCCACCAAGCTGGGACCCA...GCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CCA 90 bp GGAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTGGAAGATGTGCATCCTaGGTCCCAGCTTGGTGGGGT +
Preference number: 4 (lower is better)
Translates to: GRRGSGSVCTSPEWGGLTGRCAS*VPAWWG
Trigger: ACCCCACCAAGCTGGGACCCAGGATGCACATCTTCC...AGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000470019.5
CDS-3UTR CCA 90 bp ACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTCAGGGGCCACGTCATaGATCACCAGGGAGCCATTC +
Preference number: 4 (lower is better)
Translates to: TWVWVSVHKPRVGRTHLLSGATS*ITREPF
Trigger: GAATGGCTCCCTGGTGATCCATGACGTGGCCCCTGA...CAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000470019.5
CDS-3UTR CCA 90 bp AGCCTAGCCCTCCCCAGGCAAAGTTGGCAGATGAGTGGCAGAGTTGGACCCGGTGGCCGGAGCCCAAGCTaGTCAAGGCCACTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: SLALPRQSWQMSGRVGPGGRSPS*SRPLLL
Trigger: AAGAAGAAGTGGCCTTGACCAGCTTGGGCTCCGGCC...ACCGGGTCCAACTCTGCCACTCATCTGCCAACTTTGCCTGGGGAGGGCTAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp CCAAACTCACTCTTCCCCAGCGTGGTGATGGGCTGCAGGCTAGACCGTGGGAAGGGCCGGAGCCCAAGCTaGTCAAGGCCACTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: PNSLFPSVVMGCRLDRGKGRSPS*SRPLLL
Trigger: AAGAAGAAGTGGCCTTGACCAGCTTGGGCTCCGGCC...CTTCCCACGGTCTAGCCTGCAGCCCATCACCACGCTGGGGAAGAGTGAGTTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
CDS-3UTR CCA 90 bp CAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCAGTCACCCTCCAGGATaGCCTCGGGGGACATCCAGC +
Preference number: 4 (lower is better)
Translates to: QGSCPSCCELPSRDVLPCSHPPG*PRGTSS
Trigger: GCTGGATGTCCCCCGAGGCCATCCTGGAGGGTGACT...GCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR CCA 90 bp TTCTGCAAAGGCCCACCGTTGAGGCATTCCATCTCTGGCTCCTCGCCCTCGGGCTCTGCCTGCCCACCATaGGGCATCTCTCCATGTGTA +
Preference number: 4 (lower is better)
Translates to: FCKGPPLRHSISGSSPSGSACPP*GISPCV
Trigger: TACACATGGAGAGATGCCCCATGGTGGGCAGGCAGA...GCCCGAGGGCGAGGAGCCAGAGATGGAATGCCTCAACGGTGGGCCTTTGCAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR CCA 90 bp ACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGCCTAGTCGCCCAGTTTaGGTCCAAGTCAGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: TWVWVSVHKPRVGRTHLLPSRPV*VQVSLP
Trigger: TGGGAGGCTGACTTGGACCCAAACTGGGCGACTAGG...CAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp GGCAGGGAAAACTGCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTCGGGAAGACGTGGGTCTaGGTCAGTGTGCACAAGCCC +
Preference number: 4 (lower is better)
Translates to: GRENCPAQSPSRPVWVQVGKTWV*VSVHKP
Trigger: GGGCTTGTGCACACTGACCCAGACCCACGTCTTCCC...GACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp GTGGGGAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCGCACCACGTTGGCGTaGTTCAGCTTCCCAAACATC +
Preference number: 4 (lower is better)
Translates to: VGKTWVWVSVHKPRVGRTRTTLA*FSFPNI
Trigger: GATGTTTGGGAAGCTGAACCACGCCAACGTGGTGCG...AGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTCCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp GCCAGGAACACCTCCCCAAACTCACTCTTCCCCAGCGTGGTGATGGGCTGCAGGCGCACCACGTTGGCGTaGTTCAGCTTCCCAAACATC +
Preference number: 4 (lower is better)
Translates to: ARNTSPNSLFPSVVMGCRRTTLA*FSFPNI
Trigger: GATGTTTGGGAAGCTGAACCACGCCAACGTGGTGCG...CCTGCAGCCCATCACCACGCTGGGGAAGAGTGAGTTTGGGGAGGTGTTCCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000470019.5
ENST00000497957.1
CDS-3UTR CCA 90 bp GGCCGCGGGGCCGGAGCCCAAGCTGGTCAAGGCCACTTCTTCTTGGATCTCTGCCCGCTGCCACAAAAATaGCTTCTGTGCCATGTTCTG +
Preference number: 4 (lower is better)
Translates to: GRGAGAQAGQGHFFLDLCPLPQK*LLCHVL
Trigger: CAGAACATGGCACAGAAGCCATTTTTGTGGCAGCGG...GCAGAGATCCAAGAAGAAGTGGCCTTGACCAGCTTGGGCTCCGGCCCCGCGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000461100.5
ENST00000494146.5
3UTR CAA 72 bp TGTGAACTTGAGCTTTTCCAGCACTTGGACACGGGCTaGCGCCTCGATGCTGCCGGCTGGGGTGCTGCTCAT +
Preference number: 4 (lower is better)
Translates to: CELELFQHLDTG*RLDAAGWGAAH
Trigger: ATGAGCAGCACCCCAGCCGGCAGCATCGAGGCGCAAGCCCGTGTCCAAGTGCTGGAAAAGCTCAAGTTCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR TCA 90 bp ACAAAGCGGTTGTTGGACAGGTGCTCCATGCCCAGGGCTACCTGGGTGCATAGGTGTGGCAACGAAGTGTaGCCTGGGTCTGTGGCTGGA +
Preference number: 4 (lower is better)
Translates to: TKRLLDRCSMPRATWVHRCGNEV*PGSVAG
Trigger: TCCAGCCACAGACCCAGGTCACACTTCGTTGCCACA...CCTATGCACCCAGGTAGCCCTGGGCATGGAGCACCTGTCCAACAACCGCTTTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR TCA 90 bp GGCAGGGAAAACTGCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTCTCCGCTCCTTGCTGCTaGCTGTGTGGTTGCTCTGAC +
Preference number: 4 (lower is better)
Translates to: GRENCPAQSPSRPVWVQVSAPCC*LCGCSD
Trigger: GTCAGAGCAACCACACAGTCAGCAGCAAGGAGCGGA...GACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
CDS-3UTR TCA 90 bp CCAGAAATTGGGGTTACCTGTGGCACCCACACTGTCCCTGATAGAGGAAGAGGTGTGTGGCTTCCAGGATaGTGGGTGGGCCCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: PEIGVTCGTHTVPDRGRGVWLPG*WVGPSA
Trigger: GGCAGAGGGGCCCACCCATCATCCTGGAAGCCACAC...ACCTCTTCCTCTATCAGGGACAGTGTGGGTGCCACAGGTAACCCCAATTTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR TCA 90 bp TGCTCAGACCTCAGCAATGCCTGTTGCACTAGGGCAGGGGCCTCAGGGCCCAGGGTGAGTCCTCTGAGATaGGCATCTGGTTTCTGTACC +
Preference number: 4 (lower is better)
Translates to: CSDLSNACCTRAGASGPRVSPLR*ASGFCT
Trigger: GGTACAGAAACCAGATGCTCATCTCAGAGGACTCAC...CCTGGGCCCTGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAGGTCTGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR TCA 90 bp CAGATGAGTGGCAGAGTTGGACCCGGTCAAGGGGAGAAGTTGAAGGCCAGAAATGGCCCAGCACGGCAATaGTGTAGGCCACAGCGGCAC +
Preference number: 4 (lower is better)
Translates to: QMSGRVGPGQGEKLKARNGPARQ*CRPQRH
Trigger: GTGCCGCTGTGGCCTACATCATTGCCGTGCTGGGCC...ATTTCTGGCCTTCAACTTCTCCCCTTGACCGGGTCCAACTCTGCCACTCATCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR TCA 90 bp TCTTGGATCTCTGCTGAGGGCTGCCCGTTCTGCAAAGGCCCACCGTTGAGGCATGCAAAGGCCCACCGTTaGGGCATTCCATCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: SWISAEGCPFCKGPPLRHAKAHR*GIPSLA
Trigger: AGCCAGAGATGGAATGCCTCAACGGTGGGCCTTTGC...ATGCCTCAACGGTGGGCCTTTGCAGAACGGGCAGCCCTCAGCAGAGATCCAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
CDS-3UTR TCA 90 bp ACGCGCAGCCAAGTCCTTATGCACAAAGCGGTTGTTGGACAGGTGCTCCATGCCTCCTCAGGAACTGCTTaGGGTCTCCCCAGCGTGGTG +
Preference number: 4 (lower is better)
Translates to: TRSQVLMHKAVVGQVLHASSGTA*GLPSVV
Trigger: CACCACGCTGGGGAGACCTCAAGCAGTTCCTGAGGA...GGCATGGAGCACCTGTCCAACAACCGCTTTGTGCATAAGGACTTGGCTGCGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000461389.1
CDS-3UTR TCA 90 bp ACCGAAGGCCCAGACATCAGACTTGGTAGAGAAGTCACCCTCCAGGATGGCCTCTCCTCAGGAACTGCTTaGGGTCTCCCCAGCGTGGTG +
Preference number: 4 (lower is better)
Translates to: TEGPDIRLGREVTLQDGLSSGTA*GLPSVV
Trigger: CACCACGCTGGGGAGACCTCAAGCAGTTCCTGAGGA...GAGGCCATCCTGGAGGGTGACTTCTCTACCAAGTCTGATGTCTGGGCCTTCGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000461389.1
CDS-3UTR TCA 90 bp CAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCCTTGTCTCTGGGCACTaGCCAGGCAGTTACGCGCAG +
Preference number: 4 (lower is better)
Translates to: QGSCPSCCELPSRDVLPCLVSGH*PGSYAQ
Trigger: CTGCGCGTAACTGCCTGGTCAGTGCCCAGAGACAAG...GCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR TCA 90 bp AGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCCCTTGTCTCTGGGCACTaGCCAGGCAGTTACGCGCAG +
Preference number: 4 (lower is better)
Translates to: RDLAHHAVSFPLEMSSPALVSGH*PGSYAQ
Trigger: CTGCGCGTAACTGCCTGGTCAGTGCCCAGAGACAAG...GGCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR TCA 90 bp CCAGAAATTGGGGTTACCTGTGGCACCCACACTGTCCCTGATAGAGGAAGAGGTGGGCAGCCCTCGGGCTaGGGAAGTCTAGCCTTCCCA +
Preference number: 4 (lower is better)
Translates to: PEIGVTCGTHTVPDRGRGGQPSG*GSLAFP
Trigger: TGGGAAGGCTAGACTTCCTCAGCCCGAGGGCTGCCC...ACCTCTTCCTCTATCAGGGACAGTGTGGGTGCCACAGGTAACCCCAATTTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR TCA 90 bp TGCCTGCCCACCATGGGGCATCTCTCCATGTGTAAACACTTCCCACATCAGCACCGCTGGCAATCTCACTaGAGGAGGGCCGGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: CLPTMGHLSMCKHFPHQHRWQSH*RRAGPW
Trigger: CCAAGGACCGGCCCTCCTTCAGTGAGATTGCCAGCG...GTGCTGATGTGGGAAGTGTTTACACATGGAGAGATGCCCCATGGTGGGCAGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
CDS-3UTR TCA 90 bp CCAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCGCTGGCAATCTCACTaGAGGAGGGCCGGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: PGGQGSCPSCCELPSRDVRWQSH*RRAGPW
Trigger: CCAAGGACCGGCCCTCCTTCAGTGAGATTGCCAGCG...GACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR TCA 90 bp CTTGAGAATATTAAGGAACTCCCCACAAACCCAGCTCATCCCAAGCCTAGCCCTCTGCCCAGGCCATCCTaGGCGGGCTCCCTCCTCACG +
Preference number: 4 (lower is better)
Translates to: LENIKELPTNPAHPKPSPLPRPS*AGSLLT
Trigger: CGTGAGGAGGGAGCCCGCTCAGGATGGCCTGGGCAG...AGGGCTAGGCTTGGGATGAGCTGGGTTTGTGGGGAGTTCCTTAATATTCTCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR TCA 90 bp AGGCCCTGCTCAGACCTCAGCAATGCCTGTTGCACTAGGGCAGGGGCCTCAGGGGTCAAGGGGAGAAGTTaGAGGCCAGAAATTGGGGTT +
Preference number: 4 (lower is better)
Translates to: RPCSDLSNACCTRAGASGVKGRS*RPEIGV
Trigger: AACCCCAATTTCTGGCCTTCAACTTCTCCCCTTGAC...CCCTGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAGGTCTGAGCAGGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR TCA 90 bp CAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCCCCTCCTCCAAGCCCTaGGCCTTTGCCAGGAACACC +
Preference number: 4 (lower is better)
Translates to: QEDRDLAHHAVSFPLEMSPSSKP*AFARNT
Trigger: GGTGTTCCTGGCAAAGGCTCAGGGCTTGGAGGAGGG...GGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR TCA 90 bp TGTGTCCTCTATAATCCTGGTCTAGACCCCCAAGTGGGACCAGTGGGCCAAGAGCCCTCCTCCAAGCCCTaGGCCTTTGCCAGGAACACC +
Preference number: 4 (lower is better)
Translates to: CVLYNPGLDPQVGPVGQEPSSKP*AFARNT
Trigger: GGTGTTCCTGGCAAAGGCTCAGGGCTTGGAGGAGGG...CTCTTGGCCCACTGGTCCCACTTGGGGGTCTAGACCAGGATTATAGAGGACACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp TGGGAGCATAGTGGGACCCAGGTCTCTAGATTCCTAGTCTATTGCTCTTTCCTCAGCGCCCGGCGCCCCTaGAGTGCATCCTGGGAGGAC +
Preference number: 4 (lower is better)
Translates to: WEHSGTQVSRFLVYCSFLSARRP*SASWED
Trigger: GTCCTCCCAGGATGCACTGCAGGGGCGCCGGGCGCT...GAGGAAAGAGCAATAGACTAGGAATCTAGAGACCTGGGTCCCACTATGCTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471863.5
CDS-3UTR GCA 90 bp CCAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCAAAGCTCAGGCTGCTaGCCTGGGCGAAACGCCGCT +
Preference number: 4 (lower is better)
Translates to: PGGQGSCPSCCELPSRDVQSSGC*PGRNAA
Trigger: AGCGGCGTTTCGCCCAGGGCAGCAGCCTGAGCTTTG...GACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR GCA 90 bp CCAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTGCAAAGCTCAGGCTaGTGCCCTGGGCGAAACGCC +
Preference number: 4 (lower is better)
Translates to: PGGQGSCPSCCELPSRDVLQSSG*CPGRNA
Trigger: GGCGTTTCGCCCAGGGCAGCAGCCTGAGCTTTGCAG...GACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR GCA 90 bp GGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTCCTCTATACAGCCGGTCCACAGCTaGAAAGCTCAGGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: GQCAQAQSGEDSLAVSSIQPVHS*KAQAAA
Trigger: GGCAGCAGCCTGAGCTTTGCAGCTGTGGACCGGCTG...TATAGAGGACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp GAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCAGCCGGTCCACAGCTaGAAAGCTCAGGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: EDRDLAHHAVSFPLEMSSQPVHS*KAQAAA
Trigger: GGCAGCAGCCTGAGCTTTGCAGCTGTGGACCGGCTG...GGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR GCA 90 bp AGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCCCCACACACTGGAAGGTaGCAGAGTCCTGCAGCCGGT +
Preference number: 4 (lower is better)
Translates to: RDLAHHAVSFPLEMSSPAPHTGR*QSPAAG
Trigger: ACCGGCTGCAGGACTCTGGCACCTTCCAGTGTGTGG...GGCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR GCA 90 bp GAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTTCCGAGGCTGGATaGTTCAGGACCACAGGACCT +
Preference number: 4 (lower is better)
Translates to: EDVGLGQCAQAQSGEDSLASEAG*FRTTGP
Trigger: AGGTCCTGTGGTCCTGAAGCATCCAGCCTCGGAAGC...AAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp GGTGGCAGGGAAAACTGCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGAATACAGCCCACTATaGTCAGGACCAGCTGGCCGG +
Preference number: 4 (lower is better)
Translates to: GGRENCPAQSPSRPVWVQEYSPL*SGPAGR
Trigger: CCGGCCAGCTGGTCCTGAGCATAGTGGGCTGTATTC...TTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
CDS-3UTR GCA 90 bp TGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTGAATACAGCCCACTATaGTCAGGACCAGCTGGCCGG +
Preference number: 4 (lower is better)
Translates to: WVWVSVHKPRVGRTHLLCEYSPL*SGPAGR
Trigger: CCGGCCAGCTGGTCCTGAGCATAGTGGGCTGTATTC...ACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
CDS-3UTR GCA 90 bp CAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCTCAAAGAGCCACTaGAGGCTCGGGGGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: QEDRDLAHHAVSFPLEMSSSKSH*RLGGGW
Trigger: CCAGCCACCCCCGAGCCTGCAGTGGCTCTTTGAGGA...GGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR GCA 90 bp CTTATGCACAAAGCGGTTGTTGGACAGGTGCTCCATGCCCAGGGCTACCTGGGTGGTAGATCCCTGCATTaGGTGGCCGGACCTGGGTCA +
Preference number: 4 (lower is better)
Translates to: LMHKAVVGQVLHAQGYLGGRSLH*VAGPGS
Trigger: TGACCCAGGTCCGGCCACGCAATGCAGGGATCTACC...ACCCAGGTAGCCCTGGGCATGGAGCACCTGTCCAACAACCGCTTTGTGCATAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR GCA 90 bp GTCACTATTTCCTCTGGAGCACCCACCCTAACCCCTGTGCCTGGCTCTCTACTGGGTAGATCCCTGCATTaGGTGGCCGGACCTGGGTCA +
Preference number: 4 (lower is better)
Translates to: VTISSGAPTLTPVPGSLLGRSLH*VAGPGS
Trigger: TGACCCAGGTCCGGCCACGCAATGCAGGGATCTACC...CAGTAGAGAGCCAGGCACAGGGGTTAGGGTGGGTGCTCCAGAGGAAATAGTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471863.5
CDS-3UTR GCA 90 bp CACTCCCTCCTCCAAGCCCTGAGCCTTTGCCAGGAACACCTCCCCAAACTCACTTCTGCCCCTGGCCAATaGAGCGGTAGATCCCTGCAT +
Preference number: 4 (lower is better)
Translates to: HSLLQALSLCQEHLPKLTSAPGQ*SGRSLH
Trigger: ATGCAGGGATCTACCGCTGCATTGGCCAGGGGCAGA...AGTGAGTTTGGGGAGGTGTTCCTGGCAAAGGCTCAGGGCTTGGAGGAGGGAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR GCA 90 bp GGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTCCTCTATACCTTCTGGTAGACCCTaGCATGGGTGGGCAGCCGGA +
Preference number: 4 (lower is better)
Translates to: GQCAQAQSGEDSLAVSSIPSGRP*HGWAAG
Trigger: TCCGGCTGCCCACCCATGGCAGGGTCTACCAGAAGG...TATAGAGGACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp CCAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCCTTCTGGTAGACCCTaGCATGGGTGGGCAGCCGGA +
Preference number: 4 (lower is better)
Translates to: PGGQGSCPSCCELPSRDVPSGRP*HGWAAG
Trigger: TCCGGCTGCCCACCCATGGCAGGGTCTACCAGAAGG...GACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR GCA 90 bp GGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCTTCTGGTAGACCCTaGCATGGGTGGGCAGCCGGA +
Preference number: 4 (lower is better)
Translates to: GGQGSCPSCCELPSRDVLPSGRP*HGWAAG
Trigger: TCCGGCTGCCCACCCATGGCAGGGTCTACCAGAAGG...GAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR GCA 90 bp CTTATGCACAAAGCGGTTGTTGGACAGGTGCTCCATGCCCAGGGCTACCTGGGTCCAAGTAGCCGGGTTTaGCCTCCTCCAGCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: LMHKAVVGQVLHAQGYLGPSSRV*PPPAGC
Trigger: ACAGCCAGCTGGAGGAGGGCAAACCCGGCTACTTGG...ACCCAGGTAGCCCTGGGCATGGAGCACCTGTCCAACAACCGCTTTGTGCATAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR GCA 90 bp CAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCCCAAGTAGCCGGGTTTaGCCTCCTCCAGCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: QGSCPSCCELPSRDVLPCPSSRV*PPPAGC
Trigger: ACAGCCAGCTGGAGGAGGGCAAACCCGGCTACTTGG...GCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR GCA 90 bp AGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCCCCAAGTAGCCGGGTTTaGCCTCCTCCAGCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: RDLAHHAVSFPLEMSSPAPSSRV*PPPAGC
Trigger: ACAGCCAGCTGGAGGAGGGCAAACCCGGCTACTTGG...GGCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR GCA 90 bp GAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTTGCCGGCTGGGGTGCTaGTCATACAACGGTACCATG +
Preference number: 4 (lower is better)
Translates to: EDVGLGQCAQAQSGEDSLCRLGC*SYNGTM
Trigger: CATGGTACCGTTGTATGAGCAGCACCCCAGCCGGCA...AAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp CAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCTGCTGCCGGCTGGGGTaGTGCTCATACAACGGTACC +
Preference number: 4 (lower is better)
Translates to: QGSCPSCCELPSRDVLPCCCRLG*CSYNGT
Trigger: GGTACCGTTGTATGAGCAGCACCCCAGCCGGCAGCA...GCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR GCA 90 bp GAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCACTTGGACACGGGCTTaGGCCTCGATGCTGCCGGCT +
Preference number: 4 (lower is better)
Translates to: EDRDLAHHAVSFPLEMSSTWTRA*ASMLPA
Trigger: AGCCGGCAGCATCGAGGCGCAAGCCCGTGTCCAAGT...GGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR GCA 90 bp CAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCACTTGGACACGGGCTTaGGCCTCGATGCTGCCGGCT +
Preference number: 4 (lower is better)
Translates to: QEDRDLAHHAVSFPLEMSTWTRA*ASMLPA
Trigger: AGCCGGCAGCATCGAGGCGCAAGCCCGTGTCCAAGT...GGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR GCA 90 bp ACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGCCTTGTCAAACTCCATaGACTGCTGTGGCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: TWVWVSVHKPRVGRTHLLPCQTP*TAVAGV
Trigger: CACCCCAGCCACAGCAGTGCATGGAGTTTGACAAGG...CAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp GAGGTGGCAGGGAAAACTGCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCGCCCGTTGGAGGCAATaGAAGTGTAGTTGCCAGCGT +
Preference number: 4 (lower is better)
Translates to: EVAGKTAQLKALVAQFGSARWRQ*KCSCQR
Trigger: ACGCTGGCAACTACACTTGCATTGCCTCCAACGGGC...GGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCCACCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp GGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTCCTCTATAGCACGAATCTGGCCCTaGGGCCCGTTGGAGGCAATG +
Preference number: 4 (lower is better)
Translates to: GQCAQAQSGEDSLAVSSIARIWP*GPLEAM
Trigger: CATTGCCTCCAACGGGCCGCAGGGCCAGATTCGTGC...TATAGAGGACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp AGCCTAGCCCTCCCCAGGCAAAGTTGGCAGATGAGTGGCAGAGTTGGACCCGGTCCAGGATGCGGTCCTTaGCTTTCCACTGAATCAGCG +
Preference number: 4 (lower is better)
Translates to: SLALPRQSWQMSGRVGPGPGCGP*LSTESA
Trigger: CGCTGATTCAGTGGAAAGGCAAGGACCGCATCCTGG...ACCGGGTCCAACTCTGCCACTCATCTGCCAACTTTGCCTGGGGAGGGCTAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000470019.5
CDS-3UTR GCA 90 bp GCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTCAGCCTCCCAAAGGCCAGGATGCGGTCCTTaGCTTTCCACTGAATCAGCG +
Preference number: 4 (lower is better)
Translates to: AQLKALVAQFGSKSASQRPGCGP*LSTESA
Trigger: CGCTGATTCAGTGGAAAGGCAAGGACCGCATCCTGG...CCTTTGGGAGGCTGACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000470019.5
CDS-3UTR GCA 90 bp GGAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTAGCTGTTGCCTGCAATaGAGGTGTAGCGGCCTGAGT +
Preference number: 4 (lower is better)
Translates to: GRRGSGSVCTSPEWGGLTSCCLQ*RCSGLS
Trigger: ACTCAGGCCGCTACACCTGCATTGCAGGCAACAGCT...AGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000470019.5
CDS-3UTR GCA 90 bp GAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGTTGCAGCTGTTGCCTaGAATGCAGGTGTAGCGGCC +
Preference number: 4 (lower is better)
Translates to: EDVGLGQCAQAQSGEDSLVAAVA*NAGVAA
Trigger: GGCCGCTACACCTGCATTGCAGGCAACAGCTGCAAC...AAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000470019.5
CDS-3UTR GCA 90 bp AGCCTAGCCCTCCCCAGGCAAAGTTGGCAGATGAGTGGCAGAGTTGGACCCGGTGCAGCCGCTTGGCTTTaGAGCGCTTCTTGCAGTAGA +
Preference number: 4 (lower is better)
Translates to: SLALPRQSWQMSGRVGPGAAAWL*SASCSR
Trigger: TCTACTGCAAGAAGCGCTGCAAAGCCAAGCGGCTGC...ACCGGGTCCAACTCTGCCACTCATCTGCCAACTTTGCCTGGGGAGGGCTAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp GGCCGGAGCCCAAGCTGGTCAAGGCCACTTCTTCTTGGATCTCTGCTGAGGGCTGCAGCCGCTTGGCTTTaGAGCGCTTCTTGCAGTAGA +
Preference number: 4 (lower is better)
Translates to: GRSPSWSRPLLLGSLLRAAAAWL*SASCSR
Trigger: TCTACTGCAAGAAGCGCTGCAAAGCCAAGCGGCTGC...AGCCCTCAGCAGAGATCCAAGAAGAAGTGGCCTTGACCAGCTTGGGCTCCGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
CDS-3UTR GCA 90 bp CCAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCCCTCGGGCTGCTTCTaGAGCCGCTTGGCTTTGCAG +
Preference number: 4 (lower is better)
Translates to: PGGQGSCPSCCELPSRDVPSGCF*SRLALQ
Trigger: CTGCAAAGCCAAGCGGCTGCAGAAGCAGCCCGAGGG...GACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR GCA 90 bp GGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTCGGGCTGCTTCTaGAGCCGCTTGGCTTTGCAG +
Preference number: 4 (lower is better)
Translates to: GGQGSCPSCCELPSRDVLPSGCF*SRLALQ
Trigger: CTGCAAAGCCAAGCGGCTGCAGAAGCAGCCCGAGGG...GAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR GCA 90 bp GAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCGAGGGCTGCCCGTTCTaGAAAGGCCCACCGTTGAGG +
Preference number: 4 (lower is better)
Translates to: EDRDLAHHAVSFPLEMSSEGCPF*KGPPLR
Trigger: CCTCAACGGTGGGCCTTTGCAGAACGGGCAGCCCTC...GGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR GCA 90 bp AGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCCAGCGTGGTGATGGGCTaGAGGCTAGACCGTGGGAAG +
Preference number: 4 (lower is better)
Translates to: RDLAHHAVSFPLEMSSPASVVMG*RLDRGK
Trigger: CTTCCCACGGTCTAGCCTGCAGCCCATCACCACGCT...GGCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000481273.5
CDS-3UTR GCA 90 bp GTGGTTCAGCTTCCCAAACATCTCCAACTCCCTCCGGAAGTCCAGCTGCTGCTGAGCGTGGTGATGGGCTaGAGGCTAGACCGTGGGAAG +
Preference number: 4 (lower is better)
Translates to: VVQLPKHLQLPPEVQLLLSVVMG*RLDRGK
Trigger: CTTCCCACGGTCTAGCCTGCAGCCCATCACCACGCT...CAGCAGCAGCTGGACTTCCGGAGGGAGTTGGAGATGTTTGGGAAGCTGAACCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470019.5
ENST00000497957.1
CDS-3UTR GCA 90 bp GGCAGGGAAAACTGCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTCCATAGGGCCACCTTCTaGTTGGTGCTGAGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: GRENCPAQSPSRPVWVQVHRATF*LVLRGC
Trigger: ACAGCCCCTCAGCACCAAGCAGAAGGTGGCCCTATG...GACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp GAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTCATAGGGCCACCTTCTaGTTGGTGCTGAGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: EDVGLGQCAQAQSGEDSLHRATF*LVLRGC
Trigger: ACAGCCCCTCAGCACCAAGCAGAAGGTGGCCCTATG...AAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp AGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCCCCAGGGCTACCTGGGTaGATAGGGCCACCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: RDLAHHAVSFPLEMSSPAPGLPG*IGPPSA
Trigger: AGCAGAAGGTGGCCCTATGCACCCAGGTAGCCCTGG...GGCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR GCA 90 bp GAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCTGGACAGGTGCTCCATaGCCAGGGCTACCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: EDRDLAHHAVSFPLEMSSWTGAP*PGLPGC
Trigger: GCACCCAGGTAGCCCTGGGCATGGAGCACCTGTCCA...GGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR GCA 90 bp CACCCAGGCCTGGCGGAAGTGGTAGTACTCACTGTTGTACACATCCTTGCTGAGTGGACAGGTGCTCCATaGCCAGGGCTACCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: HPGLAEVVVLTVVHILAEWTGAP*PGLPGC
Trigger: GCACCCAGGTAGCCCTGGGCATGGAGCACCTGTCCA...CTCAGCAAGGATGTGTACAACAGTGAGTACTACCACTTCCGCCAGGCCTGGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
CDS-3UTR GCA 90 bp AGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCCCGGTTGTTGGACAGGTaGTCCATGCCCAGGGCTACC +
Preference number: 4 (lower is better)
Translates to: RDLAHHAVSFPLEMSSPARLLDR*SMPRAT
Trigger: GGTAGCCCTGGGCATGGAGCACCTGTCCAACAACCG...GGCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR GCA 90 bp GTGGGGAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCAGTACTTCATCATCTaGCTGCCCACCATGGGGCAT +
Preference number: 4 (lower is better)
Translates to: VGKTWVWVSVHKPRVGRTQYFII*LPTMGH
Trigger: ATGCCCCATGGTGGGCAGGCAGATGATGAAGTACTG...AGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTCCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp TGCTCAGACCTCAGCAATGCCTGTTGCACTAGGGCAGGGGCCTCAGGGCCCAGGCCCAGCCTGCAAATCTaGCAGTACTTCATCATCTGC +
Preference number: 4 (lower is better)
Translates to: CSDLSNACCTRAGASGPRPSLQI*QYFIIC
Trigger: GCAGATGATGAAGTACTGGCAGATTTGCAGGCTGGG...CCTGGGCCCTGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAGGTCTGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp AGGCCCTGCTCAGACCTCAGCAATGCCTGTTGCACTAGGGCAGGGGCCTCAGGGCCCAGCCTGCAAATCTaGCAGTACTTCATCATCTGC +
Preference number: 4 (lower is better)
Translates to: RPCSDLSNACCTRAGASGPSLQI*QYFIIC
Trigger: GCAGATGATGAAGTACTGGCAGATTTGCAGGCTGGG...CCCTGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAGGTCTGAGCAGGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp ATCACTTGTGCTGTGGCGTTTGTTGGTGGCCGCGGGGCCGGAGCCCAAGCTGGTCCCAGCCTGCAAATCTaGCAGTACTTCATCATCTGC +
Preference number: 4 (lower is better)
Translates to: ITCAVAFVGGRGAGAQAGPSLQI*QYFIIC
Trigger: GCAGATGATGAAGTACTGGCAGATTTGCAGGCTGGG...ACCAGCTTGGGCTCCGGCCCCGCGGCCACCAACAAACGCCACAGCACAAGTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR GCA 90 bp AGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCCTCCCTCCTCACGGCTTaGTGTCCACGGTGCTGTCTC +
Preference number: 4 (lower is better)
Translates to: RDLAHHAVSFPLEMSSPASLLTA*CPRCCL
Trigger: GAGACAGCACCGTGGACAGCAAGCCGTGAGGAGGGA...GGCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR GCA 90 bp CCTGCTCAGACCTCAGCAATGCCTGTTGCACTAGGGCAGGGGCCTCAGGGCCCAGGATCTTGCCCATCATaGTGTGAGCTTCCCTCTAGA +
Preference number: 4 (lower is better)
Translates to: PAQTSAMPVALGQGPQGPGSCPS*CELPSR
Trigger: TCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCC...TGGGCCCTGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAGGTCTGAGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp GAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTCTCAGCAATGCCTGTTaGACTAGGGCAGGGGCCTCA +
Preference number: 4 (lower is better)
Translates to: EDVGLGQCAQAQSGEDSLLSNAC*TRAGAS
Trigger: TGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAG...AAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp ACAAAGCGGTTGTTGGACAGGTGCTCCATGCCCAGGGCTACCTGGGTGCATAGGCTCAGCAATGCCTGTTaGACTAGGGCAGGGGCCTCA +
Preference number: 4 (lower is better)
Translates to: TKRLLDRCSMPRATWVHRLSNAC*TRAGAS
Trigger: TGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAG...CCTATGCACCCAGGTAGCCCTGGGCATGGAGCACCTGTCCAACAACCGCTTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
CDS-3UTR GCA 90 bp CAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTCAGCCTCCCAAAGGATGGGAAAGGCCAGGCCCTaGTCAGACCTCAGCAATGCC +
Preference number: 4 (lower is better)
Translates to: QLKALVAQFGSKSASQRMGKARP*SDLSNA
Trigger: GGCATTGCTGAGGTCTGAGCAGGGCCTGGCCTTTCC...CATCCTTTGGGAGGCTGACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp TGCTCAGACCTCAGCAATGCCTGTTGCACTAGGGCAGGGGCCTCAGGGCCCAGGTGCTCATCCTTGCTCTaGAGGCTCTTCACAAGTACC +
Preference number: 4 (lower is better)
Translates to: CSDLSNACCTRAGASGPRCSSLL*RLFTST
Trigger: GGTACTTGTGAAGAGCCTGCAGAGCAAGGATGAGCA...CCTGGGCCCTGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAGGTCTGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp CAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTCAGCCTCCCAAAGGATGCCCACTCTGGGAGGCTaGTCCCATCCAGCACTTGGA +
Preference number: 4 (lower is better)
Translates to: QLKALVAQFGSKSASQRMPTLGG*SHPALG
Trigger: TCCAAGTGCTGGATGGGAGCAGCCTCCCAGAGTGGG...CATCCTTTGGGAGGCTGACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345201.6
CDS-3UTR GCA 90 bp CTTATCACTTGTGCTGTGGCGTTTGTTGGTGGCCGCGGGGCCGGAGCCCAAGCTAGGACTCTAAGACTGTaGAGCAGCATGGTGAGACGG +
Preference number: 4 (lower is better)
Translates to: LITCAVAFVGGRGAGAQARTLRL*SSMVRR
Trigger: CCGTCTCACCATGCTGCTGCACAGTCTTAGAGTCCT...AGCTTGGGCTCCGGCCCCGCGGCCACCAACAAACGCCACAGCACAAGTGATAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461100.5
ENST00000494146.5
ENST00000497957.1
CDS-3UTR CCA 90 bp AGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCCAAGACAATGGCTGTCTaGGTACCGCCCAGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: RDLAHHAVSFPLEMSSPAKTMAV*VPPSSG
Trigger: GCCGCTGCTGGGCGGTACCCAGACAGCCATTGTCTT...GGCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp CAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCCCCTGCAGTGCATCCTaGGAGGACGGCTGCTTGATG +
Preference number: 4 (lower is better)
Translates to: QGSCPSCCELPSRDVLPCPCSAS*EDGCLM
Trigger: CATCAAGCAGCCGTCCTCCCAGGATGCACTGCAGGG...GCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CCA 90 bp CTTGAGAATATTAAGGAACTCCCCACAAACCCAGCTCATCCCAAGCCTAGCCCTCGCCGCTCCGTGTCCTaGACAGGGGCCCCATCGAGC +
Preference number: 4 (lower is better)
Translates to: LENIKELPTNPAHPKPSPRRSVS*TGAPSS
Trigger: GCTCGATGGGGCCCCTGTCCAGGACACGGAGCGGCG...AGGGCTAGGCTTGGGATGAGCTGGGTTTGTGGGGAGTTCCTTAATATTCTCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp GGTGGCAGGGAAAACTGCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAACTCAGCTTCCGAGGCTaGATGCTTCAGGACCACAGG +
Preference number: 4 (lower is better)
Translates to: GGRENCPAQSPSRPVWVQLSFRG*MLQDHR
Trigger: CCTGTGGTCCTGAAGCATCCAGCCTCGGAAGCTGAG...TTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp CTGCCGGCTGGGGTGCTGCTCATACAACGGTACCATGTCCCATCATACACCTCCCTCAGCTTCCGAGGCTaGATGCTTCAGGACCACAGG +
Preference number: 4 (lower is better)
Translates to: LPAGVLLIQRYHVPSYTSLSFRG*MLQDHR
Trigger: CCTGTGGTCCTGAAGCATCCAGCCTCGGAAGCTGAG...GGAGGTGTATGATGGGACATGGTACCGTTGTATGAGCAGCACCCCAGCCGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR CCA 90 bp GGCAGGGAAAACTGCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTCACCTGGGTCTGTGGCTaGATCTCAGCTTCCGAGGCT +
Preference number: 4 (lower is better)
Translates to: GRENCPAQSPSRPVWVQVTWVCG*ISASEA
Trigger: AGCCTCGGAAGCTGAGATCCAGCCACAGACCCAGGT...GACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp AGCCTAGCCCTCCCCAGGCAAAGTTGGCAGATGAGTGGCAGAGTTGGACCCGGTGGGTGCCCATCAATGTaGCAACGAAGTGTGACCTGG +
Preference number: 4 (lower is better)
Translates to: SLALPRQSWQMSGRVGPGGCPSM*QRSVTW
Trigger: CCAGGTCACACTTCGTTGCCACATTGATGGGCACCC...ACCGGGTCCAACTCTGCCACTCATCTGCCAACTTTGCCTGGGGAGGGCTAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp CAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCATGCTCAGGACCAGCTaGCCGGAGCGTCAGGTTCCG +
Preference number: 4 (lower is better)
Translates to: QEDRDLAHHAVSFPLEMSMLRTS*PERQVP
Trigger: CGGAACCTGACGCTCCGGCCAGCTGGTCCTGAGCAT...GGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000481273.5
CDS-3UTR CCA 90 bp AGCGCTGCATCAGCCGATAGAGTTTGGAAGGGCAGCCCTCGGGCTGAGGAAGTCTGGCCAAAAGCACTGTaGGCGCAGCAGGAATACAGC +
Preference number: 4 (lower is better)
Translates to: SAASADRVWKGSPRAEEVWPKAL*AQQEYS
Trigger: GCTGTATTCCTGCTGCGCCCACAGTGCTTTTGGCCA...GACTTCCTCAGCCCGAGGGCTGCCCTTCCAAACTCTATCGGCTGATGCAGCGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230418.8
CDS-3UTR CCA 90 bp CCAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCGCTACTACCACGTCCTaGGGTGCCAGCACCACCCTG +
Preference number: 4 (lower is better)
Translates to: PGGQGSCPSCCELPSRDVATTTS*GASTTL
Trigger: CAGGGTGGTGCTGGCACCCCAGGACGTGGTAGTAGC...GACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CCA 90 bp GAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCGCTACTACCACGTCCTaGGGTGCCAGCACCACCCTG +
Preference number: 4 (lower is better)
Translates to: EDRDLAHHAVSFPLEMSSATTTS*GASTTL
Trigger: CAGGGTGGTGCTGGCACCCCAGGACGTGGTAGTAGC...GGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CCA 90 bp AGGCCCTGCTCAGACCTCAGCAATGCCTGTTGCACTAGGGCAGGGGCCTCAGGGACTGGCAATGGAACATaGCCTCCTCATACCTCGCTA +
Preference number: 4 (lower is better)
Translates to: RPCSDLSNACCTRAGASGTGNGT*PPHTSL
Trigger: TAGCGAGGTATGAGGAGGCCATGTTCCATTGCCAGT...CCCTGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAGGTCTGAGCAGGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp GGCAGGGAAAACTGCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTCGGCTGGGCTGAGAACTaGCAATGGAACATGGCCTCC +
Preference number: 4 (lower is better)
Translates to: GRENCPAQSPSRPVWVQVGWAEN*QWNMAS
Trigger: GGAGGCCATGTTCCATTGCCAGTTCTCAGCCCAGCC...GACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp TGTGTCCTCTATAATCCTGGTCTAGACCCCCAAGTGGGACCAGTGGGCCAAGAGAGGCTCGGGGGTGGCTaGGCTGAGAACTGGCAATGG +
Preference number: 4 (lower is better)
Translates to: CVLYNPGLDPQVGPVGQERLGGG*AENWQW
Trigger: CCATTGCCAGTTCTCAGCCCAGCCACCCCCGAGCCT...CTCTTGGCCCACTGGTCCCACTTGGGGGTCTAGACCAGGATTATAGAGGACACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp ACGCGCAGCCAAGTCCTTATGCACAAAGCGGTTGTTGGACAGGTGCTCCATGCCCGTTGGCAAACACTGTaGCTCTGCGGAGGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: TRSQVLMHKAVVGQVLHARWQTL*LCGGVG
Trigger: CCCCACACCTCCGCAGAGCCACAGTGTTTGCCAACG...GGCATGGAGCACCTGTCCAACAACCGCTTTGTGCATAAGGACTTGGCTGCGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR CCA 90 bp TCTGTGAGGGCTGTCACTATTTCCTCTGGAGCACCCACCCTAACCCCTGTGCCTCGTTGGCAAACACTGTaGCTCTGCGGAGGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: SVRAVTISSGAPTLTPVPRWQTL*LCGGVG
Trigger: CCCCACACCTCCGCAGAGCCACAGTGTTTGCCAACG...AGGCACAGGGGTTAGGGTGGGTGCTCCAGAGGAAATAGTGACAGCCCTCACAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471863.5
CDS-3UTR CCA 90 bp GGCAGGGAAAACTGCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTCGCAGCAGAGACCCGTTaGCAAACACTGTGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: GRENCPAQSPSRPVWVQVAAETR*QTLWLC
Trigger: GCAGAGCCACAGTGTTTGCCAACGGGTCTCTGCTGC...GACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp CCAGAAATTGGGGTTACCTGTGGCACCCACACTGTCCCTGATAGAGGAAGAGGTTTGCGTGGCCGGACCTaGGTCAGCAGCAGAGACCCG +
Preference number: 4 (lower is better)
Translates to: PEIGVTCGTHTVPDRGRGLRGRT*VSSRDP
Trigger: CGGGTCTCTGCTGCTGACCCAGGTCCGGCCACGCAA...ACCTCTTCCTCTATCAGGGACAGTGTGGGTGCCACAGGTAACCCCAATTTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp CCATTTTTCTGTGAGGGCTGTCACTATTTCCTCTGGAGCACCCACCCTAACCCCTTGCGTGGCCGGACCTaGGTCAGCAGCAGAGACCCG +
Preference number: 4 (lower is better)
Translates to: PFFCEGCHYFLWSTHPNPLRGRT*VSSRDP
Trigger: CGGGTCTCTGCTGCTGACCCAGGTCCGGCCACGCAA...GGGGTTAGGGTGGGTGCTCCAGAGGAAATAGTGACAGCCCTCACAGAAAAATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471863.5
CDS-3UTR CCA 90 bp CCAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCGATCCCTGCATTGCGTaGCCGGACCTGGGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: PGGQGSCPSCCELPSRDVDPCIA*PDLGQQ
Trigger: CTGCTGACCCAGGTCCGGCCACGCAATGCAGGGATC...GACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CCA 90 bp TGTGTCCTCTATAATCCTGGTCTAGACCCCCAAGTGGGACCAGTGGGCCAAGAGGCTCTGGCAGACCCTTaGGGGGAAGGCAGGTCACAC +
Preference number: 4 (lower is better)
Translates to: CVLYNPGLDPQVGPVGQEALADP*GEGRSH
Trigger: GTGTGACCTGCCTTCCCCCCAAGGGTCTGCCAGAGC...CTCTTGGCCCACTGGTCCCACTTGGGGGTCTAGACCAGGATTATAGAGGACACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp CCATTTTTCTGTGAGGGCTGTCACTATTTCCTCTGGAGCACCCACCCTAACCCCGCTCCCACCACACGCTaGGCTCTGGCAGACCCTTGG +
Preference number: 4 (lower is better)
Translates to: PFFCEGCHYFLWSTHPNPAPTTR*ALADPW
Trigger: CCAAGGGTCTGCCAGAGCCCAGCGTGTGGTGGGAGC...GGGGTTAGGGTGGGTGCTCCAGAGGAAATAGTGACAGCCCTCACAGAAAAATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471863.5
CDS-3UTR CCA 90 bp AGGCCCTGCTCAGACCTCAGCAATGCCTGTTGCACTAGGGCAGGGGCCTCAGGGCACTTTCAGCAATATTaGCCAACACCAGCTCGTGGC +
Preference number: 4 (lower is better)
Translates to: RPCSDLSNACCTRAGASGHFQQY*PTPARG
Trigger: GCCACGAGCTGGTGTTGGCCAATATTGCTGAAAGTG...CCCTGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAGGTCTGAGCAGGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp GAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTTCCAGCTGGCTGTCTTaGGGCTTCTTCAGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: EDVGLGQCAQAQSGEDSLSSWLS*GFFSQE
Trigger: CTCCTGGCTGAAGAAGCCCCAAGACAGCCAGCTGGA...AAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp CAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCCTCGATGCTGCCGGCTaGGGTGCTGCTCATACAACG +
Preference number: 4 (lower is better)
Translates to: QGSCPSCCELPSRDVLPCLDAAG*GAAHTT
Trigger: CGTTGTATGAGCAGCACCCCAGCCGGCAGCATCGAG...GCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CCA 90 bp GCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTCAGCCTCCCAAAGGCTGCTGTGGCTGGGGTaGTGGTGTGAACTTGAGCTT +
Preference number: 4 (lower is better)
Translates to: AQLKALVAQFGSKSASQRLLWLG*WCELEL
Trigger: AAGCTCAAGTTCACACCACCACCCCAGCCACAGCAG...CCTTTGGGAGGCTGACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp CAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCGTCTGTCACCCACTCTaGGAGGCTGCTCCCATCTGC +
Preference number: 4 (lower is better)
Translates to: QGSCPSCCELPSRDVLPCVCHPL*EAAPIC
Trigger: GCAGATGGGAGCAGCCTCCCAGAGTGGGTGACAGAC...GCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CCA 90 bp GGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCACATGGGCACGAATCTaGCCCTGCGGCCCGTTGGAG +
Preference number: 4 (lower is better)
Translates to: GGQGSCPSCCELPSRDVLTWARI*PCGPLE
Trigger: CTCCAACGGGCCGCAGGGCCAGATTCGTGCCCATGT...GAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CCA 90 bp TGTGTCCTCTATAATCCTGGTCTAGACCCCCAAGTGGGACCAGTGGGCCAAGAGACATGGGCACGAATCTaGCCCTGCGGCCCGTTGGAG +
Preference number: 4 (lower is better)
Translates to: CVLYNPGLDPQVGPVGQETWARI*PCGPLE
Trigger: CTCCAACGGGCCGCAGGGCCAGATTCGTGCCCATGT...CTCTTGGCCCACTGGTCCCACTTGGGGGTCTAGACCAGGATTATAGAGGACACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp GAGGTGGCAGGGAAAACTGCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCACTGCCACAGTGAGCTaGACATGGGCACGAATCTGG +
Preference number: 4 (lower is better)
Translates to: EVAGKTAQLKALVAQFGSTATVS*TWARIW
Trigger: CCAGATTCGTGCCCATGTCCAGCTCACTGTGGCAGT...GGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCCACCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp GAAGTTGAAGGCCAGAAATTGGGGTTACCTGTGGCACCCACACTGTCCCTGATAGGCTTGGGGTCCCCCTaGGCCTCGCACTGCAGTAGG +
Preference number: 4 (lower is better)
Translates to: EVEGQKLGLPVAPTLSLIGLGSP*ASHCSR
Trigger: CCTACTGCAGTGCGAGGCCCAGGGGGACCCCAAGCC...TATCAGGGACAGTGTGGGTGCCACAGGTAACCCCAATTTCTGGCCTTCAACTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp AGGCCAGAAATTGGGGTTACCTGTGGCACCCACACTGTCCCTGATAGAGGAAGAACTGAATCAGCGGCTTaGGGTCCCCCTGGGCCTCGC +
Preference number: 4 (lower is better)
Translates to: RPEIGVTCGTHTVPDRGRTESAA*GPPGPR
Trigger: GCGAGGCCCAGGGGGACCCCAAGCCGCTGATTCAGT...TCTTCCTCTATCAGGGACAGTGTGGGTGCCACAGGTAACCCCAATTTCTGGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp GGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTCCTCTATATGGGTCCCAGCTTGGTaGGGTCCAGGATGCGGTCCT +
Preference number: 4 (lower is better)
Translates to: GQCAQAQSGEDSLAVSSIWVPAW*GPGCGP
Trigger: AGGACCGCATCCTGGACCCCACCAAGCTGGGACCCA...TATAGAGGACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000470019.5
CDS-3UTR CCA 90 bp TGTGTCCTCTATAATCCTGGTCTAGACCCCCAAGTGGGACCAGTGGGCCAAGAGTCCTGGGTCCCAGCTTaGTGGGGTCCAGGATGCGGT +
Preference number: 4 (lower is better)
Translates to: CVLYNPGLDPQVGPVGQESWVPA*WGPGCG
Trigger: ACCGCATCCTGGACCCCACCAAGCTGGGACCCAGGA...CTCTTGGCCCACTGGTCCCACTTGGGGGTCTAGACCAGGATTATAGAGGACACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000470019.5
CDS-3UTR CCA 90 bp CCAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCTCCTGGGTCCCAGCTTaGTGGGGTCCAGGATGCGGT +
Preference number: 4 (lower is better)
Translates to: PGGQGSCPSCCELPSRDVSWVPA*WGPGCG
Trigger: ACCGCATCCTGGACCCCACCAAGCTGGGACCCAGGA...GACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CCA 90 bp TGCTCAGACCTCAGCAATGCCTGTTGCACTAGGGCAGGGGCCTCAGGGCCCAGGCCACCGACAACCCAATaGTCTGGATCATCTTGTAGG +
Preference number: 4 (lower is better)
Translates to: CSDLSNACCTRAGASGPRPPTTQ*SGSSCR
Trigger: CCTACAAGATGATCCAGACCATTGGGTTGTCGGTGG...CCTGGGCCCTGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAGGTCTGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp AGGCCCTGCTCAGACCTCAGCAATGCCTGTTGCACTAGGGCAGGGGCCTCAGGGCCACCGACAACCCAATaGTCTGGATCATCTTGTAGG +
Preference number: 4 (lower is better)
Translates to: RPCSDLSNACCTRAGASGPPTTQ*SGSSCR
Trigger: CCTACAAGATGATCCAGACCATTGGGTTGTCGGTGG...CCCTGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAGGTCTGAGCAGGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp GGTGGCAGGGAAAACTGCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGCTTCTGCAGCCGCTTaGCTTTGCAGCGCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: GGRENCPAQSPSRPVWVQASAAA*LCSASC
Trigger: GCAAGAAGCGCTGCAAAGCCAAGCGGCTGCAGAAGC...TTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp CCCAAGCTGGTCAAGGCCACTTCTTCTTGGATCTCTGCTGAGGGCTGCCCGTTCGCTTCTGCAGCCGCTTaGCTTTGCAGCGCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: PKLVKATSSWISAEGCPFASAAA*LCSASC
Trigger: GCAAGAAGCGCTGCAAAGCCAAGCGGCTGCAGAAGC...GAACGGGCAGCCCTCAGCAGAGATCCAAGAAGAAGTGGCCTTGACCAGCTTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
CDS-3UTR CCA 90 bp GAAGTTGAAGGCCAGAAATTGGGGTTACCTGTGGCACCCACACTGTCCCTGATATGCTGTGGCGTTTGTTaGTGGCCGCGGGGCCGGAGC +
Preference number: 4 (lower is better)
Translates to: EVEGQKLGLPVAPTLSLICCGVC*WPRGRS
Trigger: GCTCCGGCCCCGCGGCCACCAACAAACGCCACAGCA...TATCAGGGACAGTGTGGGTGCCACAGGTAACCCCAATTTCTGGCCTTCAACTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp TCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTCCTCTATAATTGCTGTGGCGTTTGTTaGTGGCCGCGGGGCCGGAGC +
Preference number: 4 (lower is better)
Translates to: SVCTSPEWGGLTCCVLYNCCGVC*WPRGRS
Trigger: GCTCCGGCCCCGCGGCCACCAACAAACGCCACAGCA...ATTATAGAGGACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp TCTTATCACTTGTGCTGTGGCGTTTGTTGGTGGCCGCGGGGCCGGAGCCCAAGCTTATCACTTGTGCTGTaGCGTTTGTTGGTGGCCGCG +
Preference number: 4 (lower is better)
Translates to: SYHLCCGVCWWPRGRSPSLSLVL*RLLVAA
Trigger: CGCGGCCACCAACAAACGCCACAGCACAAGTGATAA...GCTTGGGCTCCGGCCCCGCGGCCACCAACAAACGCCACAGCACAAGTGATAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
CDS-3UTR CCA 90 bp AGGCCCTGCTCAGACCTCAGCAATGCCTGTTGCACTAGGGCAGGGGCCTCAGGGCTGCAGGCTAGACCGTaGGAAGTGCATCTTATCACT +
Preference number: 4 (lower is better)
Translates to: RPCSDLSNACCTRAGASGLQARP*EVHLIT
Trigger: AGTGATAAGATGCACTTCCCACGGTCTAGCCTGCAG...CCCTGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAGGTCTGAGCAGGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
CDS-3UTR CCA 90 bp CCTGCTCAGACCTCAGCAATGCCTGTTGCACTAGGGCAGGGGCCTCAGGGCCCACTGCAGGCTAGACCGTaGGAAGTGCATCTTATCACT +
Preference number: 4 (lower is better)
Translates to: PAQTSAMPVALGQGPQGPLQARP*EVHLIT
Trigger: AGTGATAAGATGCACTTCCCACGGTCTAGCCTGCAG...TGGGCCCTGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAGGTCTGAGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
CDS-3UTR CCA 90 bp CAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCATGCCCAGGGCTACCTaGGTGCATAGGGCCACCTTC +
Preference number: 4 (lower is better)
Translates to: QGSCPSCCELPSRDVLPCMPRAT*VHRATF
Trigger: GAAGGTGGCCCTATGCACCCAGGTAGCCCTGGGCAT...GCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR CCA 90 bp AGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCCATGCCCAGGGCTACCTaGGTGCATAGGGCCACCTTC +
Preference number: 4 (lower is better)
Translates to: RDLAHHAVSFPLEMSSPAMPRAT*VHRATF
Trigger: GAAGGTGGCCCTATGCACCCAGGTAGCCCTGGGCAT...GGCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR CCA 90 bp GGAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTGCACAAAGCGGTTGTTaGACAGGTGCTCCATGCCCA +
Preference number: 4 (lower is better)
Translates to: GRRGSGSVCTSPEWGGLTAQSGC*TGAPCP
Trigger: TGGGCATGGAGCACCTGTCCAACAACCGCTTTGTGC...AGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp ACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGGCACAAAGCGGTTGTTaGACAGGTGCTCCATGCCCA +
Preference number: 4 (lower is better)
Translates to: TWVWVSVHKPRVGRTHLLAQSGC*TGAPCP
Trigger: TGGGCATGGAGCACCTGTCCAACAACCGCTTTGTGC...CAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp AGGCCCTGCTCAGACCTCAGCAATGCCTGTTGCACTAGGGCAGGGGCCTCAGGGACCTTCACTTGTCTCTaGGCACTGACCAGGCAGTTA +
Preference number: 4 (lower is better)
Translates to: RPCSDLSNACCTRAGASGTFTCL*ALTRQL
Trigger: TAACTGCCTGGTCAGTGCCCAGAGACAAGTGAAGGT...CCCTGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAGGTCTGAGCAGGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp CAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCAGTCACCCTCCAGGATaGCCTCGGGGGACATCCAGC +
Preference number: 4 (lower is better)
Translates to: QEDRDLAHHAVSFPLEMSSHPPG*PRGTSS
Trigger: GCTGGATGTCCCCCGAGGCCATCCTGGAGGGTGACT...GGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR CCA 90 bp AGCGCTGCATCAGCCGATAGAGTTTGGAAGGGCAGCCCTCGGGCTGAGGAAGTCTCTGCCTGCCCACCATaGGGCATCTCTCCATGTGTA +
Preference number: 4 (lower is better)
Translates to: SAASADRVWKGSPRAEEVSACPP*GISPCV
Trigger: TACACATGGAGAGATGCCCCATGGTGGGCAGGCAGA...GACTTCCTCAGCCCGAGGGCTGCCCTTCCAAACTCTATCGGCTGATGCAGCGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
CDS-3UTR CCA 90 bp TGCTCAGACCTCAGCAATGCCTGTTGCACTAGGGCAGGGGCCTCAGGGCCCAGGTTGAAGGCCAGAAATTaGGGTTACCTGTGGCACCCA +
Preference number: 4 (lower is better)
Translates to: CSDLSNACCTRAGASGPRLKARN*GYLWHP
Trigger: TGGGTGCCACAGGTAACCCCAATTTCTGGCCTTCAA...CCTGGGCCCTGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAGGTCTGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp AGGCCCTGCTCAGACCTCAGCAATGCCTGTTGCACTAGGGCAGGGGCCTCAGGGTATAAAAGCCGCCCGTaGTGCATACAAAAAGGGCGG +
Preference number: 4 (lower is better)
Translates to: RPCSDLSNACCTRAGASGYKSRP*CIQKGR
Trigger: CCGCCCTTTTTGTATGCACCACGGGCGGCTTTTATA...CCCTGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAGGTCTGAGCAGGGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp AGCCTAGCCCTCCCCAGGCAAAGTTGGCAGATGAGTGGCAGAGTTGGACCCGGTCGCACCACGTTGGCGTaGTTCAGCTTCCCAAACATC +
Preference number: 4 (lower is better)
Translates to: SLALPRQSWQMSGRVGPGRTTLA*FSFPNI
Trigger: GATGTTTGGGAAGCTGAACCACGCCAACGTGGTGCG...ACCGGGTCCAACTCTGCCACTCATCTGCCAACTTTGCCTGGGGAGGGCTAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp GGCCGGAGCCCAAGCTGGTCAAGGCCACTTCTTCTTGGATCTCTGCTGAGGGCTCGCACCACGTTGGCGTaGTTCAGCTTCCCAAACATC +
Preference number: 4 (lower is better)
Translates to: GRSPSWSRPLLLGSLLRARTTLA*FSFPNI
Trigger: GATGTTTGGGAAGCTGAACCACGCCAACGTGGTGCG...AGCCCTCAGCAGAGATCCAAGAAGAAGTGGCCTTGACCAGCTTGGGCTCCGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470019.5
ENST00000497957.1
CDS-3UTR CCA 90 bp CAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTCAGCCTCCCAAAGGATGGGAGCCGCACCACGTTaGCGTGGTTCAGCTTCCCAA +
Preference number: 4 (lower is better)
Translates to: QLKALVAQFGSKSASQRMGAAPR*RGSASQ
Trigger: TTGGGAAGCTGAACCACGCCAACGTGGTGCGGCTCC...CATCCTTTGGGAGGCTGACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp AGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCCGCCGACCCTGCCGGGTaGGGTGGGGAATTCCTTTTT +
Preference number: 4 (lower is better)
Translates to: RDLAHHAVSFPLEMSSPAADPAG*GGEFLF
Trigger: AAAAAGGAATTCCCCACCCCACCCGGCAGGGTCGGC...GGCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481273.5
CDS-3UTR CCA 90 bp GGCTACAGTTACCAGATACTAAGTGCCTGCCTGGTCCCTGGCAGGTCAAGTCTGGTCAAGTCTGACACTTaGCCAAGGGCTCGGCCGCCC +
Preference number: 4 (lower is better)
Translates to: GYSYQILSACLVPGRSSLVKSDT*PRARPP
Trigger: GGGCGGCCGAGCCCTTGGCCAAGTGTCAGACTTGAC...CAGACTTGACCTGCCAGGGACCAGGCAGGCACTTAGTATCTGGTAACTGTAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476760.1
CDS-3UTR CCA 90 bp CCAAACTCACTCTTCCCCAGCGTGGTGATGGGCTGCAGGCTAGACCGTGGGAAGACACACAGATGGGTCTaGGCAGGGGCGTTGGATGTT +
Preference number: 4 (lower is better)
Translates to: PNSLFPSVVMGCRLDRGKTHRWV*AGALDV
Trigger: AACATCCAACGCCCCTGCCCAGACCCATCTGTGTGT...CTTCCCACGGTCTAGCCTGCAGCCCATCACCACGCTGGGGAAGAGTGAGTTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494146.5
CDS-3UTR TCA 90 bp AGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCCTGTGGCAACGAAGTGTaGCCTGGGTCTGTGGCTGGA +
Preference number: 4 (lower is better)
Translates to: RDLAHHAVSFPLEMSSPACGNEV*PGSVAG
Trigger: TCCAGCCACAGACCCAGGTCACACTTCGTTGCCACA...GGCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR TCA 90 bp ACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGCAGCAATGCTCAAGGTaGAGTTCTGGCTGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: TWVWVSVHKPRVGRTHLLQQCSR*SSGCCK
Trigger: CTTGCAGCAGCCAGAACTTCACCTTGAGCATTGCTG...CAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
CDS-3UTR TCA 90 bp GTGGGGAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTTCAATCTCTGCTAGGTaGAGTGTGGCTTCCAGGATG +
Preference number: 4 (lower is better)
Translates to: VGKTWVWVSVHKPRVGRTSISAR*SVASRM
Trigger: CATCCTGGAAGCCACACTTCACCTAGCAGAGATTGA...AGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTCCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR TCA 90 bp GTGGGGAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTGTGAGTCCTCTGAGATaGGCATCTGGTTTCTGTACC +
Preference number: 4 (lower is better)
Translates to: VGKTWVWVSVHKPRVGRTVSPLR*ASGFCT
Trigger: GGTACAGAAACCAGATGCTCATCTCAGAGGACTCAC...AGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTCCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR TCA 90 bp AGCCTAGCCCTCCCCAGGCAAAGTTGGCAGATGAGTGGCAGAGTTGGACCCGGTGCAAGGTCCCATTCTTaGAGACCTCGAACCGTGAGT +
Preference number: 4 (lower is better)
Translates to: SLALPRQSWQMSGRVGPGARSHS*RPRTVS
Trigger: ACTCACGGTTCGAGGTCTTCAAGAATGGGACCTTGC...ACCGGGTCCAACTCTGCCACTCATCTGCCAACTTTGCCTGGGGAGGGCTAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR TCA 90 bp CAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTCAGCCTCCCAAAGGATGTCCTTGCCTTTCCACTaGATCAGCGGCTTGGGGTCC +
Preference number: 4 (lower is better)
Translates to: QLKALVAQFGSKSASQRMSLPFH*ISGLGS
Trigger: GGACCCCAAGCCGCTGATTCAGTGGAAAGGCAAGGA...CATCCTTTGGGAGGCTGACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000470019.5
CDS-3UTR TCA 90 bp CAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCTCCTTGCCTTTCCACTaGATCAGCGGCTTGGGGTCC +
Preference number: 4 (lower is better)
Translates to: QGSCPSCCELPSRDVLPCSLPFH*ISGLGS
Trigger: GGACCCCAAGCCGCTGATTCAGTGGAAAGGCAAGGA...GCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR TCA 90 bp GGCAGTTACGCGCAGCCAAGTCCTTATGCACAAAGCGGTTGTTGGACAGGTGCTGGGCCTCCGTGTGCTTaGTGTTGCAGCTGTTGCCTG +
Preference number: 4 (lower is better)
Translates to: GSYAQPSPYAQSGCWTGAGPPCA*CCSCCL
Trigger: CAGGCAACAGCTGCAACATCAAGCACACGGAGGCCC...AGCACCTGTCCAACAACCGCTTTGTGCATAAGGACTTGGCTGCGCGTAACTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR TCA 90 bp CCAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCGGGCCTCCGTGTGCTTaGTGTTGCAGCTGTTGCCTG +
Preference number: 4 (lower is better)
Translates to: PGGQGSCPSCCELPSRDVGPPCA*CCSCCL
Trigger: CAGGCAACAGCTGCAACATCAAGCACACGGAGGCCC...GACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR TCA 90 bp GTCCTTATGCACAAAGCGGTTGTTGGACAGGTGCTCCATGCCCAGGGCTACCTGGCAAAGGCCCACCGTTaGGGCATTCCATCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: VLMHKAVVGQVLHAQGYLAKAHR*GIPSLA
Trigger: AGCCAGAGATGGAATGCCTCAACGGTGGGCCTTTGC...CAGGTAGCCCTGGGCATGGAGCACCTGTCCAACAACCGCTTTGTGCATAAGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR TCA 90 bp AGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCCGCAAAGGCCCACCGTTaGGGCATTCCATCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: RDLAHHAVSFPLEMSSPAAKAHR*GIPSLA
Trigger: AGCCAGAGATGGAATGCCTCAACGGTGGGCCTTTGC...GGCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR TCA 90 bp GGCAGGGAAAACTGCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTCTTCTTGGATCTCTGCTaGGGGCTGCCCGTTCTGCAA +
Preference number: 4 (lower is better)
Translates to: GRENCPAQSPSRPVWVQVFLDLC*GLPVLQ
Trigger: TTGCAGAACGGGCAGCCCTCAGCAGAGATCCAAGAA...GACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR TCA 90 bp GAAGTGCATCTTATCACTTGTGCTGTGGCGTTTGTTGGTGGCCGCGGGGCCGGATTCTTGGATCTCTGCTaGGGGCTGCCCGTTCTGCAA +
Preference number: 4 (lower is better)
Translates to: EVHLITCAVAFVGGRGAGFLDLC*GLPVLQ
Trigger: TTGCAGAACGGGCAGCCCTCAGCAGAGATCCAAGAA...TCCGGCCCCGCGGCCACCAACAAACGCCACAGCACAAGTGATAAGATGCACTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
CDS-3UTR TCA 90 bp AGGCCCTGCTCAGACCTCAGCAATGCCTGTTGCACTAGGGCAGGGGCCTCAGGGGGTGCTGAGGGGCTGTaGCTTCAATTTTTCATCCTT +
Preference number: 4 (lower is better)
Translates to: RPCSDLSNACCTRAGASGGAEGL*LQFFIL
Trigger: AAGGATGAAAAATTGAAGTCACAGCCCCTCAGCACC...CCCTGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAGGTCTGAGCAGGGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000489707.5
CDS-3UTR TCA 90 bp GAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCTTGTCTCTGGGCACTaGCCAGGCAGTTACGCGCAG +
Preference number: 4 (lower is better)
Translates to: EDRDLAHHAVSFPLEMSSLVSGH*PGSYAQ
Trigger: CTGCGCGTAACTGCCTGGTCAGTGCCCAGAGACAAG...GGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR TCA 90 bp CACATCAGCACACCGAAGGCCCAGACATCAGACTTGGTAGAGAAGTCACCCTCCCTTGTCTCTGGGCACTaGCCAGGCAGTTACGCGCAG +
Preference number: 4 (lower is better)
Translates to: HISTPKAQTSDLVEKSPSLVSGH*PGSYAQ
Trigger: CTGCGCGTAACTGCCTGGTCAGTGCCCAGAGACAAG...GGAGGGTGACTTCTCTACCAAGTCTGATGTCTGGGCCTTCGGTGTGCTGATGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
CDS-3UTR TCA 90 bp CAGATGAGTGGCAGAGTTGGACCCGGTCAAGGGGAGAAGTTGAAGGCCAGAAATCGCTGGCAATCTCACTaGAGGAGGGCCGGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: QMSGRVGPGQGEKLKARNRWQSH*RRAGPW
Trigger: CCAAGGACCGGCCCTCCTTCAGTGAGATTGCCAGCG...ATTTCTGGCCTTCAACTTCTCCCCTTGACCGGGTCCAACTCTGCCACTCATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR TCA 90 bp TCTGCCAGTACTTCATCATCTGCCTGCCCACCATGGGGCATCTCTCCATGTGTACGCTGGCAATCTCACTaGAGGAGGGCCGGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: SASTSSSACPPWGISPCVRWQSH*RRAGPW
Trigger: CCAAGGACCGGCCCTCCTTCAGTGAGATTGCCAGCG...TACACATGGAGAGATGCCCCATGGTGGGCAGGCAGATGATGAAGTACTGGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
CDS-3UTR TCA 90 bp AGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCCGGCAAAGTTGGCAGATaGGTGGCAGAGTTGGACCCG +
Preference number: 4 (lower is better)
Translates to: RDLAHHAVSFPLEMSSPAGKVGR*VAELDP
Trigger: CGGGTCCAACTCTGCCACTCATCTGCCAACTTTGCC...GGCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR TCA 90 bp CAGATGAGTGGCAGAGTTGGACCCGGTCAAGGGGAGAAGTTGAAGGCCAGAAATCCCTCCTCCAAGCCCTaGGCCTTTGCCAGGAACACC +
Preference number: 4 (lower is better)
Translates to: QMSGRVGPGQGEKLKARNPSSKP*AFARNT
Trigger: GGTGTTCCTGGCAAAGGCTCAGGGCTTGGAGGAGGG...ATTTCTGGCCTTCAACTTCTCCCCTTGACCGGGTCCAACTCTGCCACTCATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR TCA 90 bp AGCCTAGCCCTCCCCAGGCAAAGTTGGCAGATGAGTGGCAGAGTTGGACCCGGTTCCTCAGGAACTGCTTaGGGTCTCCCAGATCCACAT +
Preference number: 4 (lower is better)
Translates to: SLALPRQSWQMSGRVGPGSSGTA*GLPDPH
Trigger: ATGTGGATCTGGGAGACCTCAAGCAGTTCCTGAGGA...ACCGGGTCCAACTCTGCCACTCATCTGCCAACTTTGCCTGGGGAGGGCTAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR TCA 90 bp CACCACGTTGGCGTGGTTCAGCTTCCCAAACATCTCCAACTCCCTCCGGAAGTCACGACAGCCCGGCTCTaGGCAAGGACTCTAAGACTG +
Preference number: 4 (lower is better)
Translates to: HHVGVVQLPKHLQLPPEVTTARL*ARTLRL
Trigger: CAGTCTTAGAGTCCTTGCTCAGAGCCGGGCTGTCGT...GACTTCCGGAGGGAGTTGGAGATGTTTGGGAAGCTGAACCACGCCAACGTGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497957.1
CDS-3UTR TCA 90 bp TGGGGCTACAGTTACCAGATACTAAGTGCCTGCCTGGTCCCTGGCAGGTCAAGTCAGTCATTGAGGGTCTaGCAGGGGGACTGGGCACAG +
Preference number: 4 (lower is better)
Translates to: WGYSYQILSACLVPGRSSQSLRV*QGDWAQ
Trigger: CTGTGCCCAGTCCCCCTGTCAGACCCTCAATGACTG...ACTTGACCTGCCAGGGACCAGGCAGGCACTTAGTATCTGGTAACTGTAGCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476760.1
CDS-3UTR GCA 90 bp CAGATGAGTGGCAGAGTTGGACCCGGTCAAGGGGAGAAGTTGAAGGCCAGAAATCAAAGCTCAGGCTGCTaGCCTGGGCGAAACGCCGCT +
Preference number: 4 (lower is better)
Translates to: QMSGRVGPGQGEKLKARNQSSGC*PGRNAA
Trigger: AGCGGCGTTTCGCCCAGGGCAGCAGCCTGAGCTTTG...ATTTCTGGCCTTCAACTTCTCCCCTTGACCGGGTCCAACTCTGCCACTCATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp CAGATGAGTGGCAGAGTTGGACCCGGTCAAGGGGAGAAGTTGAAGGCCAGAAATCTGCAAAGCTCAGGCTaGTGCCCTGGGCGAAACGCC +
Preference number: 4 (lower is better)
Translates to: QMSGRVGPGQGEKLKARNLQSSG*CPGRNA
Trigger: GGCGTTTCGCCCAGGGCAGCAGCCTGAGCTTTGCAG...ATTTCTGGCCTTCAACTTCTCCCCTTGACCGGGTCCAACTCTGCCACTCATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp TTGTCTCTGGGCACTGACCAGGCAGTTACGCGCAGCCAAGTCCTTATGCACAAACTGCAAAGCTCAGGCTaGTGCCCTGGGCGAAACGCC +
Preference number: 4 (lower is better)
Translates to: LSLGTDQAVTRSQVLMHKLQSSG*CPGRNA
Trigger: GGCGTTTCGCCCAGGGCAGCAGCCTGAGCTTTGCAG...TTTGTGCATAAGGACTTGGCTGCGCGTAACTGCCTGGTCAGTGCCCAGAGACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR GCA 90 bp CAGATGAGTGGCAGAGTTGGACCCGGTCAAGGGGAGAAGTTGAAGGCCAGAAATCAGCCGGTCCACAGCTaGAAAGCTCAGGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: QMSGRVGPGQGEKLKARNQPVHS*KAQAAA
Trigger: GGCAGCAGCCTGAGCTTTGCAGCTGTGGACCGGCTG...ATTTCTGGCCTTCAACTTCTCCCCTTGACCGGGTCCAACTCTGCCACTCATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp CAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCAAGGTGCCAGAGTCCTaGAGCCGGTCCACAGCTGCA +
Preference number: 4 (lower is better)
Translates to: QEDRDLAHHAVSFPLEMSKVPES*SRSTAA
Trigger: TGCAGCTGTGGACCGGCTGCAGGACTCTGGCACCTT...GGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR GCA 90 bp CAATGCAAGTGTAGTTGCCAGCGTCATCTCGAGTCACCCGGGCAAAATGCAGGGAAGGTGCCAGAGTCCTaGAGCCGGTCCACAGCTGCA +
Preference number: 4 (lower is better)
Translates to: QCKCSCQRHLESPGQNAGKVPES*SRSTAA
Trigger: TGCAGCTGTGGACCGGCTGCAGGACTCTGGCACCTT...CCCTGCATTTTGCCCGGGTGACTCGAGATGACGCTGGCAACTACACTTGCATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR GCA 90 bp CCAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCAAGGTGCCAGAGTCCTaGAGCCGGTCCACAGCTGCA +
Preference number: 4 (lower is better)
Translates to: PGGQGSCPSCCELPSRDVKVPES*SRSTAA
Trigger: TGCAGCTGTGGACCGGCTGCAGGACTCTGGCACCTT...GACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR GCA 90 bp AGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCCGCTTCCGAGGCTGGATaGTTCAGGACCACAGGACCT +
Preference number: 4 (lower is better)
Translates to: RDLAHHAVSFPLEMSSPAASEAG*FRTTGP
Trigger: AGGTCCTGTGGTCCTGAAGCATCCAGCCTCGGAAGC...GGCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR GCA 90 bp CAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCGAATACAGCCCACTATaGTCAGGACCAGCTGGCCGG +
Preference number: 4 (lower is better)
Translates to: QGSCPSCCELPSRDVLPCEYSPL*SGPAGR
Trigger: CCGGCCAGCTGGTCCTGAGCATAGTGGGCTGTATTC...GCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000481273.5
CDS-3UTR GCA 90 bp GGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCTACCACGTCCTGGGGTaGCAGCACCACCCTGGCAAA +
Preference number: 4 (lower is better)
Translates to: GGQGSCPSCCELPSRDVLYHVLG*QHHPGK
Trigger: TTTGCCAGGGTGGTGCTGGCACCCCAGGACGTGGTA...GAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR GCA 90 bp CCAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCTACCACGTCCTGGGGTaGCAGCACCACCCTGGCAAA +
Preference number: 4 (lower is better)
Translates to: PGGQGSCPSCCELPSRDVYHVLG*QHHPGK
Trigger: TTTGCCAGGGTGGTGCTGGCACCCCAGGACGTGGTA...GACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR GCA 90 bp GAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCGGTAGATCCCTGCATTaGGTGGCCGGACCTGGGTCA +
Preference number: 4 (lower is better)
Translates to: EDRDLAHHAVSFPLEMSSGRSLH*VAGPGS
Trigger: TGACCCAGGTCCGGCCACGCAATGCAGGGATCTACC...GGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR GCA 90 bp CAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCTCTGCCCCTGGCCAATaGAGCGGTAGATCCCTGCAT +
Preference number: 4 (lower is better)
Translates to: QGSCPSCCELPSRDVLPCSAPGQ*SGRSLH
Trigger: ATGCAGGGATCTACCGCTGCATTGGCCAGGGGCAGA...GCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR GCA 90 bp CTTGAGAATATTAAGGAACTCCCCACAAACCCAGCTCATCCCAAGCCTAGCCCTATGGGTGGGCCCCTCTaGCCCTGGCCAATGCAGCGG +
Preference number: 4 (lower is better)
Translates to: LENIKELPTNPAHPKPSPMGGPL*PWPMQR
Trigger: CCGCTGCATTGGCCAGGGGCAGAGGGGCCCACCCAT...AGGGCTAGGCTTGGGATGAGCTGGGTTTGTGGGGAGTTCCTTAATATTCTCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp AAAGCCGCCCGTGGTGCATACAAAAAGGGCGGTTTATATAGTGTCAAAAGCTCCAGCCGGACTCCCGCGTaGTCCCACCACACGCTGGGC +
Preference number: 4 (lower is better)
Translates to: KAARGAYKKGGLYSVKSSSRTPA*SHHTLG
Trigger: GCCCAGCGTGTGGTGGGAGCACGCGGGAGTCCGGCT...GGAGCTTTTGACACTATATAAACCGCCCTTTTTGTATGCACCACGGGCGGCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp GAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCAAGTAGCCGGGTTTaGCCTCCTCCAGCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: EDRDLAHHAVSFPLEMSSPSSRV*PPPAGC
Trigger: ACAGCCAGCTGGAGGAGGGCAAACCCGGCTACTTGG...GGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR GCA 90 bp CAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCTGCCGGCTGGGGTGCTaGTCATACAACGGTACCATG +
Preference number: 4 (lower is better)
Translates to: QGSCPSCCELPSRDVLPCCRLGC*SYNGTM
Trigger: CATGGTACCGTTGTATGAGCAGCACCCCAGCCGGCA...GCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR GCA 90 bp CACATCAGCACACCGAAGGCCCAGACATCAGACTTGGTAGAGAAGTCACCCTCCTGCTGCCGGCTGGGGTaGTGCTCATACAACGGTACC +
Preference number: 4 (lower is better)
Translates to: HISTPKAQTSDLVEKSPSCCRLG*CSYNGT
Trigger: GGTACCGTTGTATGAGCAGCACCCCAGCCGGCAGCA...GGAGGGTGACTTCTCTACCAAGTCTGATGTCTGGGCCTTCGGTGTGCTGATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR GCA 90 bp GAAGTTGAAGGCCAGAAATTGGGGTTACCTGTGGCACCCACACTGTCCCTGATACTTGCGCCTCGATGCTaGCGGCTGGGGTGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: EVEGQKLGLPVAPTLSLILAPRC*RLGCCS
Trigger: TGAGCAGCACCCCAGCCGGCAGCATCGAGGCGCAAG...TATCAGGGACAGTGTGGGTGCCACAGGTAACCCCAATTTCTGGCCTTCAACTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp CAGATGAGTGGCAGAGTTGGACCCGGTCAAGGGGAGAAGTTGAAGGCCAGAAATACTTGGACACGGGCTTaGGCCTCGATGCTGCCGGCT +
Preference number: 4 (lower is better)
Translates to: QMSGRVGPGQGEKLKARNTWTRA*ASMLPA
Trigger: AGCCGGCAGCATCGAGGCGCAAGCCCGTGTCCAAGT...ATTTCTGGCCTTCAACTTCTCCCCTTGACCGGGTCCAACTCTGCCACTCATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp GGCAGGGAAAACTGCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTCTCAAACTCCATGCACTaGTGTGGCTGGGGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: GRENCPAQSPSRPVWVQVSNSMH*CGWGGG
Trigger: ACCACCACCCCAGCCACAGCAGTGCATGGAGTTTGA...GACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp CTCTGGGCACTGACCAGGCAGTTACGCGCAGCCAAGTCCTTATGCACAAAGCGGTCAAACTCCATGCACTaGTGTGGCTGGGGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: LWALTRQLRAAKSLCTKRSNSMH*CGWGGG
Trigger: ACCACCACCCCAGCCACAGCAGTGCATGGAGTTTGA...CCGCTTTGTGCATAAGGACTTGGCTGCGCGTAACTGCCTGGTCAGTGCCCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR GCA 90 bp GCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTCAGCCTCCCAAAGGGAGGCTGCTCCCATCTaGCCGTTCCCACTTAATAGT +
Preference number: 4 (lower is better)
Translates to: AQLKALVAQFGSKSASQREAAPI*PFPLNS
Trigger: ACTATTAAGTGGGAACGGGCAGATGGGAGCAGCCTC...CCTTTGGGAGGCTGACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp TCAAGGCCACTTCTTCTTGGATCTCTGCTGAGGGCTGCCCGTTCTGCAAAGGCCGTCACCCGGGCAAAATaGAGGGTCCCAGCGTTGTCT +
Preference number: 4 (lower is better)
Translates to: SRPLLLGSLLRAARSAKAVTRAK*RVPALS
Trigger: AGACAACGCTGGGACCCTGCATTTTGCCCGGGTGAC...GGCCTTTGCAGAACGGGCAGCCCTCAGCAGAGATCCAAGAAGAAGTGGCCTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR GCA 90 bp CAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCGTCACCCGGGCAAAATaGAGGGTCCCAGCGTTGTCT +
Preference number: 4 (lower is better)
Translates to: QGSCPSCCELPSRDVLPCVTRAK*RVPALS
Trigger: AGACAACGCTGGGACCCTGCATTTTGCCCGGGTGAC...GCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR GCA 90 bp AGGCCCTGCTCAGACCTCAGCAATGCCTGTTGCACTAGGGCAGGGGCCTCAGGGCAATGCAAGTGTAGTTaGCAGCGTCATCTCGAGTCA +
Preference number: 4 (lower is better)
Translates to: RPCSDLSNACCTRAGASGQCKCS*QRHLES
Trigger: TGACTCGAGATGACGCTGGCAACTACACTTGCATTG...CCCTGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAGGTCTGAGCAGGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp GAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCCCGTTGGAGGCAATaGAAGTGTAGTTGCCAGCGT +
Preference number: 4 (lower is better)
Translates to: EDVGLGQCAQAQSGEDSLARWRQ*KCSCQR
Trigger: ACGCTGGCAACTACACTTGCATTGCCTCCAACGGGC...AAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp GGTGGCAGGGAAAACTGCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGCCCGTTGGAGGCAATaGAAGTGTAGTTGCCAGCGT +
Preference number: 4 (lower is better)
Translates to: GGRENCPAQSPSRPVWVQARWRQ*KCSCQR
Trigger: ACGCTGGCAACTACACTTGCATTGCCTCCAACGGGC...TTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp GGTGGCAGGGAAAACTGCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAACCAGGATGCGGTCCTTaGCTTTCCACTGAATCAGCG +
Preference number: 4 (lower is better)
Translates to: GGRENCPAQSPSRPVWVQPGCGP*LSTESA
Trigger: CGCTGATTCAGTGGAAAGGCAAGGACCGCATCCTGG...TTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000470019.5
CDS-3UTR GCA 90 bp ACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGCCATTCTGGAAGATGTaGATCCTGGGTCCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: TWVWVSVHKPRVGRTHLLPFWKM*ILGPSL
Trigger: CAAGCTGGGACCCAGGATGCACATCTTCCAGAATGG...CAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000470019.5
CDS-3UTR GCA 90 bp AGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCCGTTGCAGCTGTTGCCTaGAATGCAGGTGTAGCGGCC +
Preference number: 4 (lower is better)
Translates to: RDLAHHAVSFPLEMSSPAVAAVA*NAGVAA
Trigger: GGCCGCTACACCTGCATTGCAGGCAACAGCTGCAAC...GGCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR GCA 90 bp GGTGGCAGGGAAAACTGCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGCAGCCGCTTGGCTTTaGAGCGCTTCTTGCAGTAGA +
Preference number: 4 (lower is better)
Translates to: GGRENCPAQSPSRPVWVQAAAWL*SASCSR
Trigger: TCTACTGCAAGAAGCGCTGCAAAGCCAAGCGGCTGC...TTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp TCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTCCTCTATAATTCCTCGCCCTCGGGCTaGTTCTGCAGCCGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: SVCTSPEWGGLTCCVLYNSSPSG*FCSRLA
Trigger: AGCCAAGCGGCTGCAGAAGCAGCCCGAGGGCGAGGA...ATTATAGAGGACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp GTGGTTCAGCTTCCCAAACATCTCCAACTCCCTCCGGAAGTCCAGCTGCTGCTGATCTCTGCTGAGGGCTaGCCGTTCTGCAAAGGCCCA +
Preference number: 4 (lower is better)
Translates to: VVQLPKHLQLPPEVQLLLISAEG*PFCKGP
Trigger: TGGGCCTTTGCAGAACGGGCAGCCCTCAGCAGAGAT...CAGCAGCAGCTGGACTTCCGGAGGGAGTTGGAGATGTTTGGGAAGCTGAACCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470019.5
ENST00000497957.1
CDS-3UTR GCA 90 bp TATCACTTGTGCTGTGGCGTTTGTTGGTGGCCGCGGGGCCGGAGCCCAAGCTGGGCATCTTATCACTTGTaGTGTGGCGTTTGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: YHLCCGVCWWPRGRSPSWASYHL*CGVCWW
Trigger: CCACCAACAAACGCCACAGCACAAGTGATAAGATGC...CCAGCTTGGGCTCCGGCCCCGCGGCCACCAACAAACGCCACAGCACAAGTGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
CDS-3UTR GCA 90 bp CCAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCAGCGTGGTGATGGGCTaGAGGCTAGACCGTGGGAAG +
Preference number: 4 (lower is better)
Translates to: PGGQGSCPSCCELPSRDVSVVMG*RLDRGK
Trigger: CTTCCCACGGTCTAGCCTGCAGCCCATCACCACGCT...GACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000481273.5
CDS-3UTR GCA 90 bp ACCTTCACTTGTCTCTGGGCACTGACCAGGCAGTTACGCGCAGCCAAGTCCTTAAGCGTGGTGATGGGCTaGAGGCTAGACCGTGGGAAG +
Preference number: 4 (lower is better)
Translates to: TFTCLWALTRQLRAAKSLSVVMG*RLDRGK
Trigger: CTTCCCACGGTCTAGCCTGCAGCCCATCACCACGCT...TAAGGACTTGGCTGCGCGTAACTGCCTGGTCAGTGCCCAGAGACAAGTGAAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
CDS-3UTR GCA 90 bp GGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCAGCGTGGTGATGGGCTaGAGGCTAGACCGTGGGAAG +
Preference number: 4 (lower is better)
Translates to: GGQGSCPSCCELPSRDVLSVVMG*RLDRGK
Trigger: CTTCCCACGGTCTAGCCTGCAGCCCATCACCACGCT...GAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000481273.5
CDS-3UTR GCA 90 bp AGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCCCATAGGGCCACCTTCTaGTTGGTGCTGAGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: RDLAHHAVSFPLEMSSPAHRATF*LVLRGC
Trigger: ACAGCCCCTCAGCACCAAGCAGAAGGTGGCCCTATG...GGCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR GCA 90 bp CACATCAGCACACCGAAGGCCCAGACATCAGACTTGGTAGAGAAGTCACCCTCCCCAGGGCTACCTGGGTaGATAGGGCCACCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: HISTPKAQTSDLVEKSPSPGLPG*IGPPSA
Trigger: AGCAGAAGGTGGCCCTATGCACCCAGGTAGCCCTGG...GGAGGGTGACTTCTCTACCAAGTCTGATGTCTGGGCCTTCGGTGTGCTGATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
CDS-3UTR GCA 90 bp CCAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCCAGGGCTACCTGGGTaGATAGGGCCACCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: PGGQGSCPSCCELPSRDVPGLPG*IGPPSA
Trigger: AGCAGAAGGTGGCCCTATGCACCCAGGTAGCCCTGG...GACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR GCA 90 bp GGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCTCCCTCCTCACGGCTTaGTGTCCACGGTGCTGTCTC +
Preference number: 4 (lower is better)
Translates to: GGQGSCPSCCELPSRDVLSLLTA*CPRCCL
Trigger: GAGACAGCACCGTGGACAGCAAGCCGTGAGGAGGGA...GAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR GCA 90 bp CAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTCAGCCTCCCAAAGGATGCTCAGCAATGCCTGTTaGACTAGGGCAGGGGCCTCA +
Preference number: 4 (lower is better)
Translates to: QLKALVAQFGSKSASQRMLSNAC*TRAGAS
Trigger: TGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAG...CATCCTTTGGGAGGCTGACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp AGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCCCTCAGCAATGCCTGTTaGACTAGGGCAGGGGCCTCA +
Preference number: 4 (lower is better)
Translates to: RDLAHHAVSFPLEMSSPALSNAC*TRAGAS
Trigger: TGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAG...GGCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp GGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTCCTCTATAGGAAAGGCCAGGCCCTaGTCAGACCTCAGCAATGCC +
Preference number: 4 (lower is better)
Translates to: GQCAQAQSGEDSLAVSSIGKARP*SDLSNA
Trigger: GGCATTGCTGAGGTCTGAGCAGGGCCTGGCCTTTCC...TATAGAGGACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp GAAGTGCATCTTATCACTTGTGCTGTGGCGTTTGTTGGTGGCCGCGGGGCCGGAGGTGGCAGGGAAAACTaGCCAGCTCAAAGCCCTAGT +
Preference number: 4 (lower is better)
Translates to: EVHLITCAVAFVGGRGAGGGREN*PAQSPS
Trigger: ACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCCACC...TCCGGCCCCGCGGCCACCAACAAACGCCACAGCACAAGTGATAAGATGCACTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR GCA 90 bp AGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCCAAGTACCAGGGTCTCTaGCACTCCCTCCTCCAAGCC +
Preference number: 4 (lower is better)
Translates to: RDLAHHAVSFPLEMSSPAKYQGL*HSLLQA
Trigger: GGCTTGGAGGAGGGAGTGGCAGAGACCCTGGTACTT...GGCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR GCA 90 bp CAAAGGCCCACCGTTGAGGCATTCCATCTCTGGCTCCTCGCCCTCGGGCTGCTTTGCTCATCCTTGCTCTaGAGGCTCTTCACAAGTACC +
Preference number: 4 (lower is better)
Translates to: QRPTVEAFHLWLLALGLLCSSLL*RLFTST
Trigger: GGTACTTGTGAAGAGCCTGCAGAGCAAGGATGAGCA...AAGCAGCCCGAGGGCGAGGAGCCAGAGATGGAATGCCTCAACGGTGGGCCTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470019.5
ENST00000497957.1
CDS-3UTR GCA 90 bp CAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTCAGCCTCCCAAAGGATGCTCCGGAAGTCCAGCTaGTGCTGCTCATCCTTGCTC +
Preference number: 4 (lower is better)
Translates to: QLKALVAQFGSKSASQRMLRKSS*CCSSLL
Trigger: GAGCAAGGATGAGCAGCAGCAGCTGGACTTCCGGAG...CATCCTTTGGGAGGCTGACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp CAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCCTCCGGAAGTCCAGCTaGTGCTGCTCATCCTTGCTC +
Preference number: 4 (lower is better)
Translates to: QGSCPSCCELPSRDVLPCLRKSS*CCSSLL
Trigger: GAGCAAGGATGAGCAGCAGCAGCTGGACTTCCGGAG...GCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR GCA 90 bp GTTGCCCGGGCTGAAGAGCAACGGTGCGATCTCAGCTCATTGCAACCTCTGCCTCCTTCAGGGCAAAGGTaGTCACTGGCCACAGTGATG +
Preference number: 4 (lower is better)
Translates to: VARAEEQRCDLSSLQPLPPSGQR*SLATVM
Trigger: CATCACTGTGGCCAGTGAGCACCTTTGCCCTGAAGG...AGGCAGAGGTTGCAATGAGCTGAGATCGCACCGTTGCTCTTCAGCCCGGGCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471863.5
CDS-3UTR GCA 90 bp CAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCCAAGCCCTGAGCCTTTaGCAGGAACACCTCGAACCG +
Preference number: 4 (lower is better)
Translates to: QGSCPSCCELPSRDVLPCQALSL*QEHLEP
Trigger: CGGTTCGAGGTGTTCCTGGCAAAGGCTCAGGGCTTG...GCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489707.5
CDS-3UTR CCA 90 bp TGTGTCCTCTATAATCCTGGTCTAGACCCCCAAGTGGGACCAGTGGGCCAAGAGAAGACAATGGCTGTCTaGGTACCGCCCAGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: CVLYNPGLDPQVGPVGQEKTMAV*VPPSSG
Trigger: GCCGCTGCTGGGCGGTACCCAGACAGCCATTGTCTT...CTCTTGGCCCACTGGTCCCACTTGGGGGTCTAGACCAGGATTATAGAGGACACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp AAAGCCGCCCGTGGTGCATACAAAAAGGGCGGTTTATATAGTGTCAAAAGCTCCCGCCGCTCCGTGTCCTaGACAGGGGCCCCATCGAGC +
Preference number: 4 (lower is better)
Translates to: KAARGAYKKGGLYSVKSSRRSVS*TGAPSS
Trigger: GCTCGATGGGGCCCCTGTCCAGGACACGGAGCGGCG...GGAGCTTTTGACACTATATAAACCGCCCTTTTTGTATGCACCACGGGCGGCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp TGGGAGCATAGTGGGACCCAGGTCTCTAGATTCCTAGTCTATTGCTCTTTCCTCCTCAGGCTGCTGCCCTaGGCGAAACGCCGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: WEHSGTQVSRFLVYCSFLLRLLP*AKRRSV
Trigger: CACGGAGCGGCGTTTCGCCCAGGGCAGCAGCCTGAG...GAGGAAAGAGCAATAGACTAGGAATCTAGAGACCTGGGTCCCACTATGCTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471863.5
CDS-3UTR CCA 90 bp GCGCAGCCAAGTCCTTATGCACAAAGCGGTTGTTGGACAGGTGCTCCATGCCCACTCAGCTTCCGAGGCTaGATGCTTCAGGACCACAGG +
Preference number: 4 (lower is better)
Translates to: AQPSPYAQSGCWTGAPCPLSFRG*MLQDHR
Trigger: CCTGTGGTCCTGAAGCATCCAGCCTCGGAAGCTGAG...TGGGCATGGAGCACCTGTCCAACAACCGCTTTGTGCATAAGGACTTGGCTGCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR CCA 90 bp CAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCACCTGGGTCTGTGGCTaGATCTCAGCTTCCGAGGCT +
Preference number: 4 (lower is better)
Translates to: QGSCPSCCELPSRDVLPCTWVCG*ISASEA
Trigger: AGCCTCGGAAGCTGAGATCCAGCCACAGACCCAGGT...GCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CCA 90 bp GGCAGGGAAAACTGCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTCTGTGACCTGGGTCTGTaGCTGGATCTCAGCTTCCGA +
Preference number: 4 (lower is better)
Translates to: GRENCPAQSPSRPVWVQVCDLGL*LDLSFR
Trigger: TCGGAAGCTGAGATCCAGCCACAGACCCAGGTCACA...GACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp GCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTCAGCCTCCCAAAGGCAACGAAGTGTGACCTaGGTCTGTGGCTGGATCTCA +
Preference number: 4 (lower is better)
Translates to: AQLKALVAQFGSKSASQRQRSVT*VCGWIS
Trigger: TGAGATCCAGCCACAGACCCAGGTCACACTTCGTTG...CCTTTGGGAGGCTGACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp TGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTGGGTGCCCATCAATGTaGCAACGAAGTGTGACCTGG +
Preference number: 4 (lower is better)
Translates to: WVWVSVHKPRVGRTHLLCGCPSM*QRSVTW
Trigger: CCAGGTCACACTTCGTTGCCACATTGATGGGCACCC...ACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp CAGATGAGTGGCAGAGTTGGACCCGGTCAAGGGGAGAAGTTGAAGGCCAGAAATGCTACTACCACGTCCTaGGGTGCCAGCACCACCCTG +
Preference number: 4 (lower is better)
Translates to: QMSGRVGPGQGEKLKARNATTTS*GASTTL
Trigger: CAGGGTGGTGCTGGCACCCCAGGACGTGGTAGTAGC...ATTTCTGGCCTTCAACTTCTCCCCTTGACCGGGTCCAACTCTGCCACTCATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp CCATTTTTCTGTGAGGGCTGTCACTATTTCCTCTGGAGCACCCACCCTAACCCCGCTACTACCACGTCCTaGGGTGCCAGCACCACCCTG +
Preference number: 4 (lower is better)
Translates to: PFFCEGCHYFLWSTHPNPATTTS*GASTTL
Trigger: CAGGGTGGTGCTGGCACCCCAGGACGTGGTAGTAGC...GGGGTTAGGGTGGGTGCTCCAGAGGAAATAGTGACAGCCCTCACAGAAAAATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471863.5
CDS-3UTR CCA 90 bp AGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCCGGCTGGGCTGAGAACTaGCAATGGAACATGGCCTCC +
Preference number: 4 (lower is better)
Translates to: RDLAHHAVSFPLEMSSPAGWAEN*QWNMAS
Trigger: GGAGGCCATGTTCCATTGCCAGTTCTCAGCCCAGCC...GGCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CCA 90 bp CCAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCGTTGGCAAACACTGTaGCTCTGCGGAGGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: PGGQGSCPSCCELPSRDVRWQTL*LCGGVG
Trigger: CCCCACACCTCCGCAGAGCCACAGTGTTTGCCAACG...GACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CCA 90 bp CAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTCAGCCTCCCAAAGGATGGCAGCAGAGACCCGTTaGCAAACACTGTGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: QLKALVAQFGSKSASQRMAAETR*QTLWLC
Trigger: GCAGAGCCACAGTGTTTGCCAACGGGTCTCTGCTGC...CATCCTTTGGGAGGCTGACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp TCTGTGAGGGCTGTCACTATTTCCTCTGGAGCACCCACCCTAACCCCTGTGCCTGCAGCAGAGACCCGTTaGCAAACACTGTGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: SVRAVTISSGAPTLTPVPAAETR*QTLWLC
Trigger: GCAGAGCCACAGTGTTTGCCAACGGGTCTCTGCTGC...AGGCACAGGGGTTAGGGTGGGTGCTCCAGAGGAAATAGTGACAGCCCTCACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471863.5
CDS-3UTR CCA 90 bp AGGCTAGACCGTGGGAAGTGCATCTTATCACTTGTGCTGTGGCGTTTGTTGGTGTTGCGTGGCCGGACCTaGGTCAGCAGCAGAGACCCG +
Preference number: 4 (lower is better)
Translates to: RLDRGKCILSLVLWRLLVLRGRT*VSSRDP
Trigger: CGGGTCTCTGCTGCTGACCCAGGTCCGGCCACGCAA...CACCAACAAACGCCACAGCACAAGTGATAAGATGCACTTCCCACGGTCTAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR CCA 90 bp CAGATGAGTGGCAGAGTTGGACCCGGTCAAGGGGAGAAGTTGAAGGCCAGAAATGCTGACCAGCCAGGTTaGCCGCGTGGCAGGTGTAGA +
Preference number: 4 (lower is better)
Translates to: QMSGRVGPGQGEKLKARNADQPG*PRGRCR
Trigger: TCTACACCTGCCACGCGGCCAACCTGGCTGGTCAGC...ATTTCTGGCCTTCAACTTCTCCCCTTGACCGGGTCCAACTCTGCCACTCATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp CCATTTTTCTGTGAGGGCTGTCACTATTTCCTCTGGAGCACCCACCCTAACCCCGCTGACCAGCCAGGTTaGCCGCGTGGCAGGTGTAGA +
Preference number: 4 (lower is better)
Translates to: PFFCEGCHYFLWSTHPNPADQPG*PRGRCR
Trigger: TCTACACCTGCCACGCGGCCAACCTGGCTGGTCAGC...GGGGTTAGGGTGGGTGCTCCAGAGGAAATAGTGACAGCCCTCACAGAAAAATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471863.5
CDS-3UTR CCA 90 bp GCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTCAGCCTCCCAAAGGGACAACTGTAGGTTTTaGTGTGGCCTGGGTCAGGCA +
Preference number: 4 (lower is better)
Translates to: AQLKALVAQFGSKSASQRDNCRF*CGLGQA
Trigger: TGCCTGACCCAGGCCACACCAAAACCTACAGTTGTC...CCTTTGGGAGGCTGACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp GGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTCCTCTATACTCGATGCTGCCGGCTaGGGTGCTGCTCATACAACG +
Preference number: 4 (lower is better)
Translates to: GQCAQAQSGEDSLAVSSILDAAG*GAAHTT
Trigger: CGTTGTATGAGCAGCACCCCAGCCGGCAGCATCGAG...TATAGAGGACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp GAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCTCGATGCTGCCGGCTaGGGTGCTGCTCATACAACG +
Preference number: 4 (lower is better)
Translates to: EDRDLAHHAVSFPLEMSSLDAAG*GAAHTT
Trigger: CGTTGTATGAGCAGCACCCCAGCCGGCAGCATCGAG...GGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CCA 90 bp TCTTGGATCTCTGCTGAGGGCTGCCCGTTCTGCAAAGGCCCACCGTTGAGGCATCTGCTGTGGCTGGGGTaGTGGTGTGAACTTGAGCTT +
Preference number: 4 (lower is better)
Translates to: SWISAEGCPFCKGPPLRHLLWLG*WCELEL
Trigger: AAGCTCAAGTTCACACCACCACCCCAGCCACAGCAG...ATGCCTCAACGGTGGGCCTTTGCAGAACGGGCAGCCCTCAGCAGAGATCCAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR CCA 90 bp CACCCAGGCCTGGCGGAAGTGGTAGTACTCACTGTTGTACACATCCTTGCTGAGGTCTGTCACCCACTCTaGGAGGCTGCTCCCATCTGC +
Preference number: 4 (lower is better)
Translates to: HPGLAEVVVLTVVHILAEVCHPL*EAAPIC
Trigger: GCAGATGGGAGCAGCCTCCCAGAGTGGGTGACAGAC...CTCAGCAAGGATGTGTACAACAGTGAGTACTACCACTTCCGCCAGGCCTGGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR CCA 90 bp GGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCGTCTGTCACCCACTCTaGGAGGCTGCTCCCATCTGC +
Preference number: 4 (lower is better)
Translates to: GGQGSCPSCCELPSRDVLVCHPL*EAAPIC
Trigger: GCAGATGGGAGCAGCCTCCCAGAGTGGGTGACAGAC...GAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CCA 90 bp CAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCGGCCCTGCGGCCCGTTaGAGGCAATGCAAGTGTAGT +
Preference number: 4 (lower is better)
Translates to: QEDRDLAHHAVSFPLEMSGPAAR*RQCKCS
Trigger: ACTACACTTGCATTGCCTCCAACGGGCCGCAGGGCC...GGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CCA 90 bp TTCCCAGCCTGCAAATCTGCCAGTACTTCATCATCTGCCTGCCCACCATGGGGCACAGTGAGCTGGACATaGGCACGAATCTGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: FPACKSASTSSSACPPWGTVSWT*ARIWPC
Trigger: GCAGGGCCAGATTCGTGCCCATGTCCAGCTCACTGT...GCCCCATGGTGGGCAGGCAGATGATGAAGTACTGGCAGATTTGCAGGCTGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR CCA 90 bp CAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCACAGTGAGCTGGACATaGGCACGAATCTGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: QGSCPSCCELPSRDVLPCTVSWT*ARIWPC
Trigger: GCAGGGCCAGATTCGTGCCCATGTCCAGCTCACTGT...GCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CCA 90 bp GGTGGCAGGGAAAACTGCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAACTGCCACAGTGAGCTaGACATGGGCACGAATCTGG +
Preference number: 4 (lower is better)
Translates to: GGRENCPAQSPSRPVWVQTATVS*TWARIW
Trigger: CCAGATTCGTGCCCATGTCCAGCTCACTGTGGCAGT...TTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp TGCTCAGACCTCAGCAATGCCTGTTGCACTAGGGCAGGGGCCTCAGGGCCCAGGCACAGTCGTACGCTCTaGTTCCACTTTGAAGGTGAT +
Preference number: 4 (lower is better)
Translates to: CSDLSNACCTRAGASGPRHSRTL*FHFEGD
Trigger: ATCACCTTCAAAGTGGAACCAGAGCGTACGACTGTG...CCTGGGCCCTGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAGGTCTGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp ACCGAAGGCCCAGACATCAGACTTGGTAGAGAAGTCACCCTCCAGGATGGCCTCAGGGCTGTGTGGCCCTaGTACACAGTCGTACGCTCT +
Preference number: 4 (lower is better)
Translates to: TEGPDIRLGREVTLQDGLRAVWP*YTVVRS
Trigger: AGAGCGTACGACTGTGTACCAGGGCCACACAGCCCT...GAGGCCATCCTGGAGGGTGACTTCTCTACCAAGTCTGATGTCTGGGCCTTCGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR CCA 90 bp TTCCCAGCCTGCAAATCTGCCAGTACTTCATCATCTGCCTGCCCACCATGGGGCAGGGCTGTGTGGCCCTaGTACACAGTCGTACGCTCT +
Preference number: 4 (lower is better)
Translates to: FPACKSASTSSSACPPWGRAVWP*YTVVRS
Trigger: AGAGCGTACGACTGTGTACCAGGGCCACACAGCCCT...GCCCCATGGTGGGCAGGCAGATGATGAAGTACTGGCAGATTTGCAGGCTGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR CCA 90 bp GGCAGGGAAAACTGCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTCTGCAGTAGGGCTGTGTaGCCCTGGTACACAGTCGTA +
Preference number: 4 (lower is better)
Translates to: GRENCPAQSPSRPVWVQVCSRAV*PWYTVV
Trigger: TACGACTGTGTACCAGGGCCACACAGCCCTACTGCA...GACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp AGGCCAGAAATTGGGGTTACCTGTGGCACCCACACTGTCCCTGATAGAGGAAGATGGGTCCCAGCTTGGTaGGGTCCAGGATGCGGTCCT +
Preference number: 4 (lower is better)
Translates to: RPEIGVTCGTHTVPDRGRWVPAW*GPGCGP
Trigger: AGGACCGCATCCTGGACCCCACCAAGCTGGGACCCA...TCTTCCTCTATCAGGGACAGTGTGGGTGCCACAGGTAACCCCAATTTCTGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000470019.5
CDS-3UTR CCA 90 bp CAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCGGAAGATGTGCATCCTaGGTCCCAGCTTGGTGGGGT +
Preference number: 4 (lower is better)
Translates to: QGSCPSCCELPSRDVLPCGRCAS*VPAWWG
Trigger: ACCCCACCAAGCTGGGACCCAGGATGCACATCTTCC...GCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CCA 90 bp AGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCCTCAGGGGCCACGTCATaGATCACCAGGGAGCCATTC +
Preference number: 4 (lower is better)
Translates to: RDLAHHAVSFPLEMSSPASGATS*ITREPF
Trigger: GAATGGCTCCCTGGTGATCCATGACGTGGCCCCTGA...GGCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CCA 90 bp CAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCTCAGGGGCCACGTCATaGATCACCAGGGAGCCATTC +
Preference number: 4 (lower is better)
Translates to: QGSCPSCCELPSRDVLPCSGATS*ITREPF
Trigger: GAATGGCTCCCTGGTGATCCATGACGTGGCCCCTGA...GCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CCA 90 bp TCAAGGCCACTTCTTCTTGGATCTCTGCTGAGGGCTGCCCGTTCTGCAAAGGCCTCAGGGGCCACGTCATaGATCACCAGGGAGCCATTC +
Preference number: 4 (lower is better)
Translates to: SRPLLLGSLLRAARSAKASGATS*ITREPF
Trigger: GAATGGCTCCCTGGTGATCCATGACGTGGCCCCTGA...GGCCTTTGCAGAACGGGCAGCCCTCAGCAGAGATCCAAGAAGAAGTGGCCTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR CCA 90 bp CTTATCACTTGTGCTGTGGCGTTTGTTGGTGGCCGCGGGGCCGGAGCCCAAGCTCCACCGACAACCCAATaGTCTGGATCATCTTGTAGG +
Preference number: 4 (lower is better)
Translates to: LITCAVAFVGGRGAGAQAPPTTQ*SGSSCR
Trigger: CCTACAAGATGATCCAGACCATTGGGTTGTCGGTGG...AGCTTGGGCTCCGGCCCCGCGGCCACCAACAAACGCCACAGCACAAGTGATAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
CDS-3UTR CCA 90 bp CTCATCCTTGCTCTGCAGGCTCTTCACAAGTACCAGGGTCTCTGCCACTCCCTCGCTTCTGCAGCCGCTTaGCTTTGCAGCGCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: LILALQALHKYQGLCHSLASAAA*LCSASC
Trigger: GCAAGAAGCGCTGCAAAGCCAAGCGGCTGCAGAAGC...GAGGGAGTGGCAGAGACCCTGGTACTTGTGAAGAGCCTGCAGAGCAAGGATGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470019.5
ENST00000497957.1
CDS-3UTR CCA 90 bp CAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTCAGCCTCCCAAAGGATGGGCCGGAGCCCAAGCTaGTCAAGGCCACTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: QLKALVAQFGSKSASQRMGRSPS*SRPLLL
Trigger: AAGAAGAAGTGGCCTTGACCAGCTTGGGCTCCGGCC...CATCCTTTGGGAGGCTGACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp CACCACGTTGGCGTGGTTCAGCTTCCCAAACATCTCCAACTCCCTCCGGAAGTCGGCCGGAGCCCAAGCTaGTCAAGGCCACTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: HHVGVVQLPKHLQLPPEVGRSPS*SRPLLL
Trigger: AAGAAGAAGTGGCCTTGACCAGCTTGGGCTCCGGCC...GACTTCCGGAGGGAGTTGGAGATGTTTGGGAAGCTGAACCACGCCAACGTGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470019.5
ENST00000497957.1
CDS-3UTR CCA 90 bp CAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCGGCCGGAGCCCAAGCTaGTCAAGGCCACTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: QGSCPSCCELPSRDVLPCGRSPS*SRPLLL
Trigger: AAGAAGAAGTGGCCTTGACCAGCTTGGGCTCCGGCC...GCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CCA 90 bp CTTGAGAATATTAAGGAACTCCCCACAAACCCAGCTCATCCCAAGCCTAGCCCTTGTGGCGTTTGTTGGTaGCCGCGGGGCCGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: LENIKELPTNPAHPKPSPCGVCW*PRGRSP
Trigger: TGGGCTCCGGCCCCGCGGCCACCAACAAACGCCACA...AGGGCTAGGCTTGGGATGAGCTGGGTTTGTGGGGAGTTCCTTAATATTCTCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp GGAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTTATCACTTGTGCTGTaGCGTTTGTTGGTGGCCGCG +
Preference number: 4 (lower is better)
Translates to: GRRGSGSVCTSPEWGGLTLSLVL*RLLVAA
Trigger: CGCGGCCACCAACAAACGCCACAGCACAAGTGATAA...AGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp AGCCTAGCCCTCCCCAGGCAAAGTTGGCAGATGAGTGGCAGAGTTGGACCCGGTTTATCACTTGTGCTGTaGCGTTTGTTGGTGGCCGCG +
Preference number: 4 (lower is better)
Translates to: SLALPRQSWQMSGRVGPGLSLVL*RLLVAA
Trigger: CGCGGCCACCAACAAACGCCACAGCACAAGTGATAA...ACCGGGTCCAACTCTGCCACTCATCTGCCAACTTTGCCTGGGGAGGGCTAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp GGGCCCTCCGACTCCTCCGGCACAGGCTTGTCTGAGAGACACACAGATGGGTCTCTGCAGGCTAGACCGTaGGAAGTGCATCTTATCACT +
Preference number: 4 (lower is better)
Translates to: GPSDSSGTGLSERHTDGSLQARP*EVHLIT
Trigger: AGTGATAAGATGCACTTCCCACGGTCTAGCCTGCAG...AGACCCATCTGTGTGTCTCTCAGACAAGCCTGTGCCGGAGGAGTCGGAGGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494146.5
CDS-3UTR CCA 90 bp GGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTCCTCTATAATGCCCAGGGCTACCTaGGTGCATAGGGCCACCTTC +
Preference number: 4 (lower is better)
Translates to: GQCAQAQSGEDSLAVSSIMPRAT*VHRATF
Trigger: GAAGGTGGCCCTATGCACCCAGGTAGCCCTGGGCAT...TATAGAGGACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp CAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCTCAGCCGATAGAGTTTaGAAGGGCAGCCCTCGGGCT +
Preference number: 4 (lower is better)
Translates to: QGSCPSCCELPSRDVLPCSADRV*KGSPRA
Trigger: AGCCCGAGGGCTGCCCTTCCAAACTCTATCGGCTGA...GCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR CCA 90 bp CAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTCAGCCTCCCAAAGGATGCCTAGTCGCCCAGTTTaGGTCCAAGTCAGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: QLKALVAQFGSKSASQRMPSRPV*VQVSLP
Trigger: TGGGAGGCTGACTTGGACCCAAACTGGGCGACTAGG...CATCCTTTGGGAGGCTGACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp GGCAGGGAAAACTGCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTCGATGAGTGGCAGAGTTaGACCCGGTCAAGGGGAGAA +
Preference number: 4 (lower is better)
Translates to: GRENCPAQSPSRPVWVQVDEWQS*TRSRGE
Trigger: TTCTCCCCTTGACCGGGTCCAACTCTGCCACTCATC...GACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp GGTGGCAGGGAAAACTGCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGATGAGTGGCAGAGTTaGACCCGGTCAAGGGGAGAA +
Preference number: 4 (lower is better)
Translates to: GGRENCPAQSPSRPVWVQDEWQS*TRSRGE
Trigger: TTCTCCCCTTGACCGGGTCCAACTCTGCCACTCATC...TTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp TGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTGATGAGTGGCAGAGTTaGACCCGGTCAAGGGGAGAA +
Preference number: 4 (lower is better)
Translates to: WVWVSVHKPRVGRTHLLCDEWQS*TRSRGE
Trigger: TTCTCCCCTTGACCGGGTCCAACTCTGCCACTCATC...ACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp GGTGGCAGGGAAAACTGCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAATGCACAAGCCCAGAGTaGGGAGGACTCACTTGCTGT +
Preference number: 4 (lower is better)
Translates to: GGRENCPAQSPSRPVWVQCTSPE*GGLTCC
Trigger: ACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCA...TTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp CACATCAGCACACCGAAGGCCCAGACATCAGACTTGGTAGAGAAGTCACCCTCCGGGAAGACGTGGGTCTaGGTCAGTGTGCACAAGCCC +
Preference number: 4 (lower is better)
Translates to: HISTPKAQTSDLVEKSPSGKTWV*VSVHKP
Trigger: GGGCTTGTGCACACTGACCCAGACCCACGTCTTCCC...GGAGGGTGACTTCTCTACCAAGTCTGATGTCTGGGCCTTCGGTGTGCTGATGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR CCA 90 bp CCTGCTCAGACCTCAGCAATGCCTGTTGCACTAGGGCAGGGGCCTCAGGGCCCAACAACAATAAAAGTGTaGGGTAAGGATGGCCCACCC +
Preference number: 4 (lower is better)
Translates to: PAQTSAMPVALGQGPQGPTTIKV*GKDGPP
Trigger: GGGTGGGCCATCCTTACCCCACACTTTTATTGTTGT...TGGGCCCTGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAGGTCTGAGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp AGGCCCTGCTCAGACCTCAGCAATGCCTGTTGCACTAGGGCAGGGGCCTCAGGGACAACAATAAAAGTGTaGGGTAAGGATGGCCCACCC +
Preference number: 4 (lower is better)
Translates to: RPCSDLSNACCTRAGASGTTIKV*GKDGPP
Trigger: GGGTGGGCCATCCTTACCCCACACTTTTATTGTTGT...CCCTGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAGGTCTGAGCAGGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp TGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTCGCACCACGTTGGCGTaGTTCAGCTTCCCAAACATC +
Preference number: 4 (lower is better)
Translates to: WVWVSVHKPRVGRTHLLCRTTLA*FSFPNI
Trigger: GATGTTTGGGAAGCTGAACCACGCCAACGTGGTGCG...ACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp GGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCGGAGCCGCACCACGTTaGCGTGGTTCAGCTTCCCAA +
Preference number: 4 (lower is better)
Translates to: GGQGSCPSCCELPSRDVLGAAPR*RGSASQ
Trigger: TTGGGAAGCTGAACCACGCCAACGTGGTGCGGCTCC...GAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR CCA 90 bp CAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCGGAGCCGCACCACGTTaGCGTGGTTCAGCTTCCCAA +
Preference number: 4 (lower is better)
Translates to: QEDRDLAHHAVSFPLEMSGAAPR*RGSASQ
Trigger: TTGGGAAGCTGAACCACGCCAACGTGGTGCGGCTCC...GGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR CCA 90 bp GTGCATCTTATCACTTGTGCTGTGGCGTTTGTTGGTGGCCGCGGGGCCGGAGCCCCGCTGCCACAAAAATaGCTTCTGTGCCATGTTCTG +
Preference number: 4 (lower is better)
Translates to: VHLITCAVAFVGGRGAGAPLPQK*LLCHVL
Trigger: CAGAACATGGCACAGAAGCCATTTTTGTGGCAGCGG...GGCTCCGGCCCCGCGGCCACCAACAAACGCCACAGCACAAGTGATAAGATGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000461100.5
ENST00000494146.5
CDS-3UTR CCA 90 bp CCAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCTCGCGCTCCCCACGGTaGGTGCGGATGGTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: PGGQGSCPSCCELPSRDVSRSPR*VRMVFS
Trigger: AGAAAAGACCATCCGCACCCACCGTGGGGAGCGCGA...GACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481273.5
CDS-3UTR CCA 90 bp CAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCAAGACAATGGCTGTCTaGGTACCTGGGCCGACCCTG +
Preference number: 4 (lower is better)
Translates to: QGSCPSCCELPSRDVLPCKTMAV*VPGPTL
Trigger: CAGGGTCGGCCCAGGTACCCAGACAGCCATTGTCTT...GCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481273.5
3UTR CAA 72 bp TTACGCGCAGCCAAGTCCTTATGCACAAAGCGGTTGTaGGACAGGTGCTCCATGCCCAGGGCTACCTGGGTG +
Preference number: 4 (lower is better)
Translates to: LRAAKSLCTKRL*DRCSMPRATWV
Trigger: CACCCAGGTAGCCCTGGGCATGGAGCACCTGTCCAACAACCGCTTTGTGCATAAGGACTTGGCTGCGCGTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
3UTR CAA 72 bp CAGTTACGCGCAGCCAAGTCCTTATGCACAAAGCGGTaGTTGGACAGGTGCTCCATGCCCAGGGCTACCTGG +
Preference number: 4 (lower is better)
Translates to: QLRAAKSLCTKR*LDRCSMPRATW
Trigger: CCAGGTAGCCCTGGGCATGGAGCACCTGTCCAACAACCGCTTTGTGCATAAGGACTTGGCTGCGCGTAACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
CDS-3UTR TCA 90 bp ACCAGTGGGCCAAGAGACTCATTAACCCTGTGTGCCCAGAACTTGAGAATATTACTCAGGAAAAGGAGCTaGGGGCGCACGGCGGGCGCG +
Preference number: 4 (lower is better)
Translates to: TSGPRDSLTLCAQNLRILLRKRS*GRTAGA
Trigger: CGCGCCCGCCGTGCGCCCTCAGCTCCTTTTCCTGAG...TAATATTCTCAAGTTCTGGGCACACAGGGTTAATGAGTCTCTTGGCCCACTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR TCA 90 bp TGTGTCCTCTATAATCCTGGTCTAGACCCCCAAGTGGGACCAGTGGGCCAAGAGTGTGGCAACGAAGTGTaGCCTGGGTCTGTGGCTGGA +
Preference number: 4 (lower is better)
Translates to: CVLYNPGLDPQVGPVGQECGNEV*PGSVAG
Trigger: TCCAGCCACAGACCCAGGTCACACTTCGTTGCCACA...CTCTTGGCCCACTGGTCCCACTTGGGGGTCTAGACCAGGATTATAGAGGACACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR TCA 90 bp GGCAGTTACGCGCAGCCAAGTCCTTATGCACAAAGCGGTTGTTGGACAGGTGCTTCCGCTCCTTGCTGCTaGCTGTGTGGTTGCTCTGAC +
Preference number: 4 (lower is better)
Translates to: GSYAQPSPYAQSGCWTGASAPCC*LCGCSD
Trigger: GTCAGAGCAACCACACAGTCAGCAGCAAGGAGCGGA...AGCACCTGTCCAACAACCGCTTTGTGCATAAGGACTTGGCTGCGCGTAACTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230418.8
CDS-3UTR TCA 90 bp CAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCGCTCCTTGCTGCTaGCTGTGTGGTTGCTCTGAC +
Preference number: 4 (lower is better)
Translates to: QEDRDLAHHAVSFPLEMSSAPCC*LCGCSD
Trigger: GTCAGAGCAACCACACAGTCAGCAGCAAGGAGCGGA...GGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000481273.5
CDS-3UTR TCA 90 bp ACAAAGCGGTTGTTGGACAGGTGCTCCATGCCCAGGGCTACCTGGGTGCATAGGCAGCAATGCTCAAGGTaGAGTTCTGGCTGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: TKRLLDRCSMPRATWVHRQQCSR*SSGCCK
Trigger: CTTGCAGCAGCCAGAACTTCACCTTGAGCATTGCTG...CCTATGCACCCAGGTAGCCCTGGGCATGGAGCACCTGTCCAACAACCGCTTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230418.8
CDS-3UTR TCA 90 bp TGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTCAGCAATGCTCAAGGTaGAGTTCTGGCTGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: WVWVSVHKPRVGRTHLLCQQCSR*SSGCCK
Trigger: CTTGCAGCAGCCAGAACTTCACCTTGAGCATTGCTG...ACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
CDS-3UTR TCA 90 bp GAGGTGGCAGGGAAAACTGCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCTCAATCTCTGCTAGGTaGAGTGTGGCTTCCAGGATG +
Preference number: 4 (lower is better)
Translates to: EVAGKTAQLKALVAQFGSSISAR*SVASRM
Trigger: CATCCTGGAAGCCACACTTCACCTAGCAGAGATTGA...GGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCCACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR TCA 90 bp CTGTACCCAGAGGACCATTTTTCTGTGAGGGCTGTCACTATTTCCTCTGGAGCAACATCCTGTCTCCGCTaGCCAGCCAGGTTGGCCGCG +
Preference number: 4 (lower is better)
Translates to: LYPEDHFSVRAVTISSGATSCLR*PARLAA
Trigger: CGCGGCCAACCTGGCTGGTCAGCGGAGACAGGATGT...TGCTCCAGAGGAAATAGTGACAGCCCTCACAGAAAAATGGTCCTCTGGGTACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471863.5
CDS-3UTR TCA 90 bp CTCTGGGCACTGACCAGGCAGTTACGCGCAGCCAAGTCCTTATGCACAAAGCGGGCAAGGTCCCATTCTTaGAGACCTCGAACCGTGAGT +
Preference number: 4 (lower is better)
Translates to: LWALTRQLRAAKSLCTKRARSHS*RPRTVS
Trigger: ACTCACGGTTCGAGGTCTTCAAGAATGGGACCTTGC...CCGCTTTGTGCATAAGGACTTGGCTGCGCGTAACTGCCTGGTCAGTGCCCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR TCA 90 bp GGCAGGGAAAACTGCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTCGCAAGGTCCCATTCTTaGAGACCTCGAACCGTGAGT +
Preference number: 4 (lower is better)
Translates to: GRENCPAQSPSRPVWVQVARSHS*RPRTVS
Trigger: ACTCACGGTTCGAGGTCTTCAAGAATGGGACCTTGC...GACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR TCA 90 bp AGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCCACACCTCCACGCTGTTaGTGCGCAAGGTCCCATTCT +
Preference number: 4 (lower is better)
Translates to: RDLAHHAVSFPLEMSSPATPPRC*CARSHS
Trigger: AGAATGGGACCTTGCGCATCAACAGCGTGGAGGTGT...GGCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR TCA 90 bp CAGATGAGTGGCAGAGTTGGACCCGGTCAAGGGGAGAAGTTGAAGGCCAGAAATGGGCCTCCGTGTGCTTaGTGTTGCAGCTGTTGCCTG +
Preference number: 4 (lower is better)
Translates to: QMSGRVGPGQGEKLKARNGPPCA*CCSCCL
Trigger: CAGGCAACAGCTGCAACATCAAGCACACGGAGGCCC...ATTTCTGGCCTTCAACTTCTCCCCTTGACCGGGTCCAACTCTGCCACTCATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000470019.5
CDS-3UTR TCA 90 bp ATGCCCACCCACCCCACGCTGCAATTACATATAAAAGCCGCCCGTGGTGCATACGCAAAGGCCCACCGTTaGGGCATTCCATCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: MPTHPTLQLHIKAARGAYAKAHR*GIPSLA
Trigger: AGCCAGAGATGGAATGCCTCAACGGTGGGCCTTTGC...GTATGCACCACGGGCGGCTTTTATATGTAATTGCAGCGTGGGGTGGGTGGGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR TCA 90 bp GGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTCCTCTATAGCAAAGGCCCACCGTTaGGGCATTCCATCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: GQCAQAQSGEDSLAVSSIAKAHR*GIPSLA
Trigger: AGCCAGAGATGGAATGCCTCAACGGTGGGCCTTTGC...TATAGAGGACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR TCA 90 bp TGTGTCCTCTATAATCCTGGTCTAGACCCCCAAGTGGGACCAGTGGGCCAAGAGGCAAAGGCCCACCGTTaGGGCATTCCATCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: CVLYNPGLDPQVGPVGQEAKAHR*GIPSLA
Trigger: AGCCAGAGATGGAATGCCTCAACGGTGGGCCTTTGC...CTCTTGGCCCACTGGTCCCACTTGGGGGTCTAGACCAGGATTATAGAGGACACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR TCA 90 bp CAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCTTCTTGGATCTCTGCTaGGGGCTGCCCGTTCTGCAA +
Preference number: 4 (lower is better)
Translates to: QGSCPSCCELPSRDVLPCFLDLC*GLPVLQ
Trigger: TTGCAGAACGGGCAGCCCTCAGCAGAGATCCAAGAA...GCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000481273.5
CDS-3UTR TCA 90 bp CTCTGGGCACTGACCAGGCAGTTACGCGCAGCCAAGTCCTTATGCACAAAGCGGCCTTCTGCTTGGTGCTaGGGGGCTGTGACTTCAATT +
Preference number: 4 (lower is better)
Translates to: LWALTRQLRAAKSLCTKRPSAWC*GAVTSI
Trigger: AATTGAAGTCACAGCCCCTCAGCACCAAGCAGAAGG...CCGCTTTGTGCATAAGGACTTGGCTGCGCGTAACTGCCTGGTCAGTGCCCAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
CDS-3UTR TCA 90 bp GGCAGGGAAAACTGCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTCCCTTCTGCTTGGTGCTaGGGGGCTGTGACTTCAATT +
Preference number: 4 (lower is better)
Translates to: GRENCPAQSPSRPVWVQVPSAWC*GAVTSI
Trigger: AATTGAAGTCACAGCCCCTCAGCACCAAGCAGAAGG...GACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR TCA 90 bp GAAGTTGAAGGCCAGAAATTGGGGTTACCTGTGGCACCCACACTGTCCCTGATACGCTGGCAATCTCACTaGAGGAGGGCCGGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: EVEGQKLGLPVAPTLSLIRWQSH*RRAGPW
Trigger: CCAAGGACCGGCCCTCCTTCAGTGAGATTGCCAGCG...TATCAGGGACAGTGTGGGTGCCACAGGTAACCCCAATTTCTGGCCTTCAACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR TCA 90 bp GGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTCCTCTATAGGCAAAGTTGGCAGATaGGTGGCAGAGTTGGACCCG +
Preference number: 4 (lower is better)
Translates to: GQCAQAQSGEDSLAVSSIGKVGR*VAELDP
Trigger: CGGGTCCAACTCTGCCACTCATCTGCCAACTTTGCC...TATAGAGGACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR TCA 90 bp ATGCCCACCCACCCCACGCTGCAATTACATATAAAAGCCGCCCGTGGTGCATACGGCAAAGTTGGCAGATaGGTGGCAGAGTTGGACCCG +
Preference number: 4 (lower is better)
Translates to: MPTHPTLQLHIKAARGAYGKVGR*VAELDP
Trigger: CGGGTCCAACTCTGCCACTCATCTGCCAACTTTGCC...GTATGCACCACGGGCGGCTTTTATATGTAATTGCAGCGTGGGGTGGGTGGGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR TCA 90 bp CAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCGCCAGGCACTTAGGATaGGGAAAGGAGAGAAGGGTG +
Preference number: 4 (lower is better)
Translates to: QGSCPSCCELPSRDVLPCARHLG*GKERRV
Trigger: CACCCTTCTCTCCTTTCCTCATCCTAAGTGCCTGGC...GCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR TCA 90 bp GTTGGTGGCCGCGGGGCCGGAGCCCAAGCTGGTCAAGGCCACTTCTTCTTGGATAGTGTCAAAAGCTCCTaGAAACTCCTTCATCTGCCA +
Preference number: 4 (lower is better)
Translates to: VGGRGAGAQAGQGHFFLDSVKSS*KLLHLP
Trigger: TGGCAGATGAAGGAGTTTTCAGGAGCTTTTGACACT...ATCCAAGAAGAAGTGGCCTTGACCAGCTTGGGCTCCGGCCCCGCGGCCACCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR TCA 90 bp CCTGCTCAGACCTCAGCAATGCCTGTTGCACTAGGGCAGGGGCCTCAGGGCCCAAGTGTCAAAAGCTCCTaGAAACTCCTTCATCTGCCA +
Preference number: 4 (lower is better)
Translates to: PAQTSAMPVALGQGPQGPSVKSS*KLLHLP
Trigger: TGGCAGATGAAGGAGTTTTCAGGAGCTTTTGACACT...TGGGCCCTGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAGGTCTGAGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR TCA 90 bp GAAGTTGAAGGCCAGAAATTGGGGTTACCTGTGGCACCCACACTGTCCCTGATACCCTCCTCCAAGCCCTaGGCCTTTGCCAGGAACACC +
Preference number: 4 (lower is better)
Translates to: EVEGQKLGLPVAPTLSLIPSSKP*AFARNT
Trigger: GGTGTTCCTGGCAAAGGCTCAGGGCTTGGAGGAGGG...TATCAGGGACAGTGTGGGTGCCACAGGTAACCCCAATTTCTGGCCTTCAACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR TCA 90 bp CTGCCGGCTGGGGTGCTGCTCATACAACGGTACCATGTCCCATCATACACCTCCTCCTCAGGAACTGCTTaGGGTCTCCCAGATCCACAT +
Preference number: 4 (lower is better)
Translates to: LPAGVLLIQRYHVPSYTSSSGTA*GLPDPH
Trigger: ATGTGGATCTGGGAGACCTCAAGCAGTTCCTGAGGA...GGAGGTGTATGATGGGACATGGTACCGTTGTATGAGCAGCACCCCAGCCGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR TCA 90 bp GTCCTTATGCACAAAGCGGTTGTTGGACAGGTGCTCCATGCCCAGGGCTACCTGACAAGAGCGTCACGATaGGACCTGACACTCTGGCCA +
Preference number: 4 (lower is better)
Translates to: VLMHKAVVGQVLHAQGYLTRASR*DLTLWP
Trigger: TGGCCAGAGTGTCAGGTCTCATCGTGACGCTCTTGT...CAGGTAGCCCTGGGCATGGAGCACCTGTCCAACAACCGCTTTGTGCATAAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461389.1
CDS-3UTR TCA 90 bp CTGTTGCCCGGGCTGAAGAGCAACGGTGCGATCTCAGCTCATTGCAACCTCTGCCCACCGCGCCCAGCCTaGTATAAAGGGTTTATCATG +
Preference number: 4 (lower is better)
Translates to: LLPGLKSNGAISAHCNLCPPRPA*YKGFIM
Trigger: CATGATAAACCCTTTATATCAGGCTGGGCGCGGTGG...GCAGAGGTTGCAATGAGCTGAGATCGCACCGTTGCTCTTCAGCCCGGGCAACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471863.5
CDS-3UTR TCA 90 bp CACTCTGTGCATTGGGAGCATAGTGGGACCCAGGTCTCTAGATTCCTAGTCTATCAACTCCTGACCTTGTaGTCCGCCCGGCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: HSVHWEHSGTQVSRFLVYQLLTL*SARLGL
Trigger: GAGGCCGAGCCGGGCGGATCACAAGGTCAGGAGTTG...ATAGACTAGGAATCTAGAGACCTGGGTCCCACTATGCTCCCAATGCACAGAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471863.5
CDS-3UTR TCA 90 bp CTGGTCAAGGCCACTTCTTCTTGGATCTCTGCTGAGGGCTGCCCGTTCTGCAAACGGCACAGGCTTGTCTaGGAGACACACAGATGGGTC +
Preference number: 4 (lower is better)
Translates to: LVKATSSWISAEGCPFCKRHRLV*ETHRWV
Trigger: GACCCATCTGTGTGTCTCTCAGACAAGCCTGTGCCG...TTTGCAGAACGGGCAGCCCTCAGCAGAGATCCAAGAAGAAGTGGCCTTGACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494146.5
CDS-3UTR GCA 90 bp TCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTCCTCTATAATCTGCAAAGCTCAGGCTaGTGCCCTGGGCGAAACGCC +
Preference number: 4 (lower is better)
Translates to: SVCTSPEWGGLTCCVLYNLQSSG*CPGRNA
Trigger: GGCGTTTCGCCCAGGGCAGCAGCCTGAGCTTTGCAG...ATTATAGAGGACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp GAAGTTGAAGGCCAGAAATTGGGGTTACCTGTGGCACCCACACTGTCCCTGATACAGCCGGTCCACAGCTaGAAAGCTCAGGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: EVEGQKLGLPVAPTLSLIQPVHS*KAQAAA
Trigger: GGCAGCAGCCTGAGCTTTGCAGCTGTGGACCGGCTG...TATCAGGGACAGTGTGGGTGCCACAGGTAACCCCAATTTCTGGCCTTCAACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp CCATTTTTCTGTGAGGGCTGTCACTATTTCCTCTGGAGCACCCACCCTAACCCCAAGGTGCCAGAGTCCTaGAGCCGGTCCACAGCTGCA +
Preference number: 4 (lower is better)
Translates to: PFFCEGCHYFLWSTHPNPKVPES*SRSTAA
Trigger: TGCAGCTGTGGACCGGCTGCAGGACTCTGGCACCTT...GGGGTTAGGGTGGGTGCTCCAGAGGAAATAGTGACAGCCCTCACAGAAAAATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471863.5
CDS-3UTR GCA 90 bp TGCCTGCCCACCATGGGGCATCTCTCCATGTGTAAACACTTCCCACATCAGCACGCTTCCGAGGCTGGATaGTTCAGGACCACAGGACCT +
Preference number: 4 (lower is better)
Translates to: CLPTMGHLSMCKHFPHQHASEAG*FRTTGP
Trigger: AGGTCCTGTGGTCCTGAAGCATCCAGCCTCGGAAGC...GTGCTGATGTGGGAAGTGTTTACACATGGAGAGATGCCCCATGGTGGGCAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR GCA 90 bp ATGCCCACCCACCCCACGCTGCAATTACATATAAAAGCCGCCCGTGGTGCATACGCTTCCGAGGCTGGATaGTTCAGGACCACAGGACCT +
Preference number: 4 (lower is better)
Translates to: MPTHPTLQLHIKAARGAYASEAG*FRTTGP
Trigger: AGGTCCTGTGGTCCTGAAGCATCCAGCCTCGGAAGC...GTATGCACCACGGGCGGCTTTTATATGTAATTGCAGCGTGGGGTGGGTGGGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp CAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCGAATACAGCCCACTATaGTCAGGACCAGCTGGCCGG +
Preference number: 4 (lower is better)
Translates to: QEDRDLAHHAVSFPLEMSEYSPL*SGPAGR
Trigger: CCGGCCAGCTGGTCCTGAGCATAGTGGGCTGTATTC...GGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000481273.5
CDS-3UTR GCA 90 bp CAGATGAGTGGCAGAGTTGGACCCGGTCAAGGGGAGAAGTTGAAGGCCAGAAATGGTAGATCCCTGCATTaGGTGGCCGGACCTGGGTCA +
Preference number: 4 (lower is better)
Translates to: QMSGRVGPGQGEKLKARNGRSLH*VAGPGS
Trigger: TGACCCAGGTCCGGCCACGCAATGCAGGGATCTACC...ATTTCTGGCCTTCAACTTCTCCCCTTGACCGGGTCCAACTCTGCCACTCATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp CCAGAAATTGGGGTTACCTGTGGCACCCACACTGTCCCTGATAGAGGAAGAGGTGGTAGATCCCTGCATTaGGTGGCCGGACCTGGGTCA +
Preference number: 4 (lower is better)
Translates to: PEIGVTCGTHTVPDRGRGGRSLH*VAGPGS
Trigger: TGACCCAGGTCCGGCCACGCAATGCAGGGATCTACC...ACCTCTTCCTCTATCAGGGACAGTGTGGGTGCCACAGGTAACCCCAATTTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp GGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCTCTGCCCCTGGCCAATaGAGCGGTAGATCCCTGCAT +
Preference number: 4 (lower is better)
Translates to: GGQGSCPSCCELPSRDVLSAPGQ*SGRSLH
Trigger: ATGCAGGGATCTACCGCTGCATTGGCCAGGGGCAGA...GAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR GCA 90 bp GGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTCCTCTATATGCCGGCTGGGGTGCTaGTCATACAACGGTACCATG +
Preference number: 4 (lower is better)
Translates to: GQCAQAQSGEDSLAVSSICRLGC*SYNGTM
Trigger: CATGGTACCGTTGTATGAGCAGCACCCCAGCCGGCA...TATAGAGGACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp GGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCTGCCGGCTGGGGTGCTaGTCATACAACGGTACCATG +
Preference number: 4 (lower is better)
Translates to: GGQGSCPSCCELPSRDVLCRLGC*SYNGTM
Trigger: CATGGTACCGTTGTATGAGCAGCACCCCAGCCGGCA...GAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR GCA 90 bp CAGATGAGTGGCAGAGTTGGACCCGGTCAAGGGGAGAAGTTGAAGGCCAGAAATTGCTGCCGGCTGGGGTaGTGCTCATACAACGGTACC +
Preference number: 4 (lower is better)
Translates to: QMSGRVGPGQGEKLKARNCCRLG*CSYNGT
Trigger: GGTACCGTTGTATGAGCAGCACCCCAGCCGGCAGCA...ATTTCTGGCCTTCAACTTCTCCCCTTGACCGGGTCCAACTCTGCCACTCATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp ACACCGAAGGCCCAGACATCAGACTTGGTAGAGAAGTCACCCTCCAGGATGGCCTCAAACTCCATGCACTaGTGTGGCTGGGGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: TPKAQTSDLVEKSPSRMASNSMH*CGWGGG
Trigger: ACCACCACCCCAGCCACAGCAGTGCATGGAGTTTGA...GGCCATCCTGGAGGGTGACTTCTCTACCAAGTCTGATGTCTGGGCCTTCGGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR GCA 90 bp ACTTCTTCTTGGATCTCTGCTGAGGGCTGCCCGTTCTGCAAAGGCCCACCGTTGCCTTGTCAAACTCCATaGACTGCTGTGGCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: TSSWISAEGCPFCKGPPLPCQTP*TAVAGV
Trigger: CACCCCAGCCACAGCAGTGCATGGAGTTTGACAAGG...CAACGGTGGGCCTTTGCAGAACGGGCAGCCCTCAGCAGAGATCCAAGAAGAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR GCA 90 bp AGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCCCCTTGTCAAACTCCATaGACTGCTGTGGCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: RDLAHHAVSFPLEMSSPAPCQTP*TAVAGV
Trigger: CACCCCAGCCACAGCAGTGCATGGAGTTTGACAAGG...GGCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR GCA 90 bp GAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCGTCACCCGGGCAAAATaGAGGGTCCCAGCGTTGTCT +
Preference number: 4 (lower is better)
Translates to: EDRDLAHHAVSFPLEMSSVTRAK*RVPALS
Trigger: AGACAACGCTGGGACCCTGCATTTTGCCCGGGTGAC...GGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR GCA 90 bp CCAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCGTCACCCGGGCAAAATaGAGGGTCCCAGCGTTGTCT +
Preference number: 4 (lower is better)
Translates to: PGGQGSCPSCCELPSRDVVTRAK*RVPALS
Trigger: AGACAACGCTGGGACCCTGCATTTTGCCCGGGTGAC...GACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR GCA 90 bp TCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTCCTCTATAATGCACGAATCTGGCCCTaGGGCCCGTTGGAGGCAATG +
Preference number: 4 (lower is better)
Translates to: SVCTSPEWGGLTCCVLYNARIWP*GPLEAM
Trigger: CATTGCCTCCAACGGGCCGCAGGGCCAGATTCGTGC...ATTATAGAGGACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp TGTGTCCTCTATAATCCTGGTCTAGACCCCCAAGTGGGACCAGTGGGCCAAGAGTGGTGGGGTCCAGGATaGGGTCCTTGCCTTTCCACT +
Preference number: 4 (lower is better)
Translates to: CVLYNPGLDPQVGPVGQEWWGPG*GPCLST
Trigger: AGTGGAAAGGCAAGGACCGCATCCTGGACCCCACCA...CTCTTGGCCCACTGGTCCCACTTGGGGGTCTAGACCAGGATTATAGAGGACACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000470019.5
CDS-3UTR GCA 90 bp CCAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCTGGTGGGGTCCAGGATaGGGTCCTTGCCTTTCCACT +
Preference number: 4 (lower is better)
Translates to: PGGQGSCPSCCELPSRDVWWGPG*GPCLST
Trigger: AGTGGAAAGGCAAGGACCGCATCCTGGACCCCACCA...GACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR GCA 90 bp AGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCCGCAGCCGCTTGGCTTTaGAGCGCTTCTTGCAGTAGA +
Preference number: 4 (lower is better)
Translates to: RDLAHHAVSFPLEMSSPAAAAWL*SASCSR
Trigger: TCTACTGCAAGAAGCGCTGCAAAGCCAAGCGGCTGC...GGCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR GCA 90 bp CAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCGCAGCCGCTTGGCTTTaGAGCGCTTCTTGCAGTAGA +
Preference number: 4 (lower is better)
Translates to: QGSCPSCCELPSRDVLPCAAAWL*SASCSR
Trigger: TCTACTGCAAGAAGCGCTGCAAAGCCAAGCGGCTGC...GCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR GCA 90 bp TCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTCCTCTATAATCCCTCGGGCTGCTTCTaGAGCCGCTTGGCTTTGCAG +
Preference number: 4 (lower is better)
Translates to: SVCTSPEWGGLTCCVLYNPSGCF*SRLALQ
Trigger: CTGCAAAGCCAAGCGGCTGCAGAAGCAGCCCGAGGG...ATTATAGAGGACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp GTGTGCCCAGAACTTGAGAATATTAAGGAACTCCCCACAAACCCAGCTCATCCCTCCTCGCCCTCGGGCTaGTTCTGCAGCCGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: VCPELENIKELPTNPAHPSSPSG*FCSRLA
Trigger: AGCCAAGCGGCTGCAGAAGCAGCCCGAGGGCGAGGA...GGGATGAGCTGGGTTTGTGGGGAGTTCCTTAATATTCTCAAGTTCTGGGCACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp GAAGTTGAAGGCCAGAAATTGGGGTTACCTGTGGCACCCACACTGTCCCTGATAGAGGGCTGCCCGTTCTaGAAAGGCCCACCGTTGAGG +
Preference number: 4 (lower is better)
Translates to: EVEGQKLGLPVAPTLSLIEGCPF*KGPPLR
Trigger: CCTCAACGGTGGGCCTTTGCAGAACGGGCAGCCCTC...TATCAGGGACAGTGTGGGTGCCACAGGTAACCCCAATTTCTGGCCTTCAACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp CAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCATCTCTGCTGAGGGCTaGCCGTTCTGCAAAGGCCCA +
Preference number: 4 (lower is better)
Translates to: QEDRDLAHHAVSFPLEMSISAEG*PFCKGP
Trigger: TGGGCCTTTGCAGAACGGGCAGCCCTCAGCAGAGAT...GGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000481273.5
CDS-3UTR GCA 90 bp TGGGGTCCAGGATGCGGTCCTTGCCTTTCCACTGAATCAGCGGCTTGGGGTCCCGCATCTTATCACTTGTaGTGTGGCGTTTGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: WGPGCGPCLSTESAAWGPASYHL*CGVCWW
Trigger: CCACCAACAAACGCCACAGCACAAGTGATAAGATGC...GGGACCCCAAGCCGCTGATTCAGTGGAAAGGCAAGGACCGCATCCTGGACCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR GCA 90 bp GGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCATAGGGCCACCTTCTaGTTGGTGCTGAGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: GGQGSCPSCCELPSRDVLHRATF*LVLRGC
Trigger: ACAGCCCCTCAGCACCAAGCAGAAGGTGGCCCTATG...GAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR GCA 90 bp CCAGAAATTGGGGTTACCTGTGGCACCCACACTGTCCCTGATAGAGGAAGAGGTCCAGGGCTACCTGGGTaGATAGGGCCACCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: PEIGVTCGTHTVPDRGRGPGLPG*IGPPSA
Trigger: AGCAGAAGGTGGCCCTATGCACCCAGGTAGCCCTGG...ACCTCTTCCTCTATCAGGGACAGTGTGGGTGCCACAGGTAACCCCAATTTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp TCTGCCAGTACTTCATCATCTGCCTGCCCACCATGGGGCATCTCTCCATGTGTACGGTTGTTGGACAGGTaGTCCATGCCCAGGGCTACC +
Preference number: 4 (lower is better)
Translates to: SASTSSSACPPWGISPCVRLLDR*SMPRAT
Trigger: GGTAGCCCTGGGCATGGAGCACCTGTCCAACAACCG...TACACATGGAGAGATGCCCCATGGTGGGCAGGCAGATGATGAAGTACTGGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
CDS-3UTR GCA 90 bp ACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGGCAGCCAAGTCCTTATaGACAAAGCGGTTGTTGGAC +
Preference number: 4 (lower is better)
Translates to: TWVWVSVHKPRVGRTHLLAAKSL*TKRLLD
Trigger: GTCCAACAACCGCTTTGTGCATAAGGACTTGGCTGC...CAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp GGAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTGCAGCCAAGTCCTTATaGACAAAGCGGTTGTTGGAC +
Preference number: 4 (lower is better)
Translates to: GRRGSGSVCTSPEWGGLTAAKSL*TKRLLD
Trigger: GTCCAACAACCGCTTTGTGCATAAGGACTTGGCTGC...AGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp GCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTCAGCCTCCCAAAGGGCAGCCAAGTCCTTATaGACAAAGCGGTTGTTGGAC +
Preference number: 4 (lower is better)
Translates to: AQLKALVAQFGSKSASQRAAKSL*TKRLLD
Trigger: GTCCAACAACCGCTTTGTGCATAAGGACTTGGCTGC...CCTTTGGGAGGCTGACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp TGGCTGAACAGGGCACCGTGGCCTCCTTGTCAAACTCCATGCACTGCTGTGGCTCAGTACTTCATCATCTaGCTGCCCACCATGGGGCAT +
Preference number: 4 (lower is better)
Translates to: WLNRAPWPPCQTPCTAVAQYFII*LPTMGH
Trigger: ATGCCCCATGGTGGGCAGGCAGATGATGAAGTACTG...AGCCACAGCAGTGCATGGAGTTTGACAAGGAGGCCACGGTGCCCTGTTCAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR GCA 90 bp GCCCAGACATCAGACTTGGTAGAGAAGTCACCCTCCAGGATGGCCTCGGGGGACCCCAGCCTGCAAATCTaGCAGTACTTCATCATCTGC +
Preference number: 4 (lower is better)
Translates to: AQTSDLVEKSPSRMASGDPSLQI*QYFIIC
Trigger: GCAGATGATGAAGTACTGGCAGATTTGCAGGCTGGG...GTCCCCCGAGGCCATCCTGGAGGGTGACTTCTCTACCAAGTCTGATGTCTGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
CDS-3UTR GCA 90 bp GGAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTCCCAGCCTGCAAATCTaGCAGTACTTCATCATCTGC +
Preference number: 4 (lower is better)
Translates to: GRRGSGSVCTSPEWGGLTPSLQI*QYFIIC
Trigger: GCAGATGATGAAGTACTGGCAGATTTGCAGGCTGGG...AGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp GCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTCAGCCTCCCAAAGGCCCAGCCTGCAAATCTaGCAGTACTTCATCATCTGC +
Preference number: 4 (lower is better)
Translates to: AQLKALVAQFGSKSASQRPSLQI*QYFIIC
Trigger: GCAGATGATGAAGTACTGGCAGATTTGCAGGCTGGG...CCTTTGGGAGGCTGACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp AGCCTAGCCCTCCCCAGGCAAAGTTGGCAGATGAGTGGCAGAGTTGGACCCGGTCTAGCCTTCCCAGCCTaGAAATCTGCCAGTACTTCA +
Preference number: 4 (lower is better)
Translates to: SLALPRQSWQMSGRVGPGLAFPA*KSASTS
Trigger: TGAAGTACTGGCAGATTTGCAGGCTGGGAAGGCTAG...ACCGGGTCCAACTCTGCCACTCATCTGCCAACTTTGCCTGGGGAGGGCTAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp CAGATGAGTGGCAGAGTTGGACCCGGTCAAGGGGAGAAGTTGAAGGCCAGAAATTCCCTCCTCACGGCTTaGTGTCCACGGTGCTGTCTC +
Preference number: 4 (lower is better)
Translates to: QMSGRVGPGQGEKLKARNSLLTA*CPRCCL
Trigger: GAGACAGCACCGTGGACAGCAAGCCGTGAGGAGGGA...ATTTCTGGCCTTCAACTTCTCCCCTTGACCGGGTCCAACTCTGCCACTCATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp AGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCCGGTGGCAGGGAAAACTaGCCAGCTCAAAGCCCTAGT +
Preference number: 4 (lower is better)
Translates to: RDLAHHAVSFPLEMSSPAGGREN*PAQSPS
Trigger: ACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCCACC...GGCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp CAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCGGTGGCAGGGAAAACTaGCCAGCTCAAAGCCCTAGT +
Preference number: 4 (lower is better)
Translates to: QGSCPSCCELPSRDVLPCGGREN*PAQSPS
Trigger: ACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCCACC...GCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp GTGGGGAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTTGGGGAGGACTCACTTaGTGTGTCCTCTATAATCCT +
Preference number: 4 (lower is better)
Translates to: VGKTWVWVSVHKPRVGRTWGGLT*CVLYNP
Trigger: AGGATTATAGAGGACACAGCAAGTGAGTCCTCCCCA...AGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTCCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp GTTTGTTGGTGGCCGCGGGGCCGGAGCCCAAGCTGGTCAAGGCCACTTCTTCTTTGGGGAGGACTCACTTaGTGTGTCCTCTATAATCCT +
Preference number: 4 (lower is better)
Translates to: VCWWPRGRSPSWSRPLLLWGGLT*CVLYNP
Trigger: AGGATTATAGAGGACACAGCAAGTGAGTCCTCCCCA...AAGAAGAAGTGGCCTTGACCAGCTTGGGCTCCGGCCCCGCGGCCACCAACAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR GCA 90 bp ACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGAAAAGCCGCCCGTGGTaGATACAAAAAGGGCGGTTT +
Preference number: 4 (lower is better)
Translates to: TWVWVSVHKPRVGRTHLLKSRPW*IQKGRF
Trigger: AAACCGCCCTTTTTGTATGCACCACGGGCGGCTTTT...CAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp GGCCGGAGCCCAAGCTGGTCAAGGCCACTTCTTCTTGGATCTCTGCTGAGGGCTAAAAGCCGCCCGTGGTaGATACAAAAAGGGCGGTTT +
Preference number: 4 (lower is better)
Translates to: GRSPSWSRPLLLGSLLRAKSRPW*IQKGRF
Trigger: AAACCGCCCTTTTTGTATGCACCACGGGCGGCTTTT...AGCCCTCAGCAGAGATCCAAGAAGAAGTGGCCTTGACCAGCTTGGGCTCCGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR GCA 90 bp GGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCTCCGGAAGTCCAGCTaGTGCTGCTCATCCTTGCTC +
Preference number: 4 (lower is better)
Translates to: GGQGSCPSCCELPSRDVLLRKSS*CCSSLL
Trigger: GAGCAAGGATGAGCAGCAGCAGCTGGACTTCCGGAG...GAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR GCA 90 bp GGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTCCTCTATACTCCGGAAGTCCAGCTaGTGCTGCTCATCCTTGCTC +
Preference number: 4 (lower is better)
Translates to: GQCAQAQSGEDSLAVSSILRKSS*CCSSLL
Trigger: GAGCAAGGATGAGCAGCAGCAGCTGGACTTCCGGAG...TATAGAGGACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp TCTTGGATCTCTGCTGAGGGCTGCCCGTTCTGCAAAGGCCCACCGTTGAGGCATCCGAATCCCCACCGCTaGCACAAAAATGGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: SWISAEGCPFCKGPPLRHPNPHR*HKNGFC
Trigger: ACAGAAGCCATTTTTGTGGCAGCGGTGGGGATTCGG...ATGCCTCAACGGTGGGCCTTTGCAGAACGGGCAGCCCTCAGCAGAGATCCAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000461100.5
ENST00000494146.5
ENST00000497957.1
CDS-3UTR CCA 90 bp TCTGCCAGTACTTCATCATCTGCCTGCCCACCATGGGGCATCTCTCCATGTGTAAAGACAATGGCTGTCTaGGTACCGCCCAGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: SASTSSSACPPWGISPCVKTMAV*VPPSSG
Trigger: GCCGCTGCTGGGCGGTACCCAGACAGCCATTGTCTT...TACACATGGAGAGATGCCCCATGGTGGGCAGGCAGATGATGAAGTACTGGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR CCA 90 bp ATGCCCACCCACCCCACGCTGCAATTACATATAAAAGCCGCCCGTGGTGCATACCTCAGCTTCCGAGGCTaGATGCTTCAGGACCACAGG +
Preference number: 4 (lower is better)
Translates to: MPTHPTLQLHIKAARGAYLSFRG*MLQDHR
Trigger: CCTGTGGTCCTGAAGCATCCAGCCTCGGAAGCTGAG...GTATGCACCACGGGCGGCTTTTATATGTAATTGCAGCGTGGGGTGGGTGGGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp GGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCTCAGCTTCCGAGGCTaGATGCTTCAGGACCACAGG +
Preference number: 4 (lower is better)
Translates to: GGQGSCPSCCELPSRDVLLSFRG*MLQDHR
Trigger: CCTGTGGTCCTGAAGCATCCAGCCTCGGAAGCTGAG...GAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CCA 90 bp CAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCCTCAGCTTCCGAGGCTaGATGCTTCAGGACCACAGG +
Preference number: 4 (lower is better)
Translates to: QEDRDLAHHAVSFPLEMSLSFRG*MLQDHR
Trigger: CCTGTGGTCCTGAAGCATCCAGCCTCGGAAGCTGAG...GGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CCA 90 bp CACATCAGCACACCGAAGGCCCAGACATCAGACTTGGTAGAGAAGTCACCCTCCACCTGGGTCTGTGGCTaGATCTCAGCTTCCGAGGCT +
Preference number: 4 (lower is better)
Translates to: HISTPKAQTSDLVEKSPSTWVCG*ISASEA
Trigger: AGCCTCGGAAGCTGAGATCCAGCCACAGACCCAGGT...GGAGGGTGACTTCTCTACCAAGTCTGATGTCTGGGCCTTCGGTGTGCTGATGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR CCA 90 bp CAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCACCTGGGTCTGTGGCTaGATCTCAGCTTCCGAGGCT +
Preference number: 4 (lower is better)
Translates to: QEDRDLAHHAVSFPLEMSTWVCG*ISASEA
Trigger: AGCCTCGGAAGCTGAGATCCAGCCACAGACCCAGGT...GGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CCA 90 bp TGTGTCCTCTATAATCCTGGTCTAGACCCCCAAGTGGGACCAGTGGGCCAAGAGACCTGGGTCTGTGGCTaGATCTCAGCTTCCGAGGCT +
Preference number: 4 (lower is better)
Translates to: CVLYNPGLDPQVGPVGQETWVCG*ISASEA
Trigger: AGCCTCGGAAGCTGAGATCCAGCCACAGACCCAGGT...CTCTTGGCCCACTGGTCCCACTTGGGGGTCTAGACCAGGATTATAGAGGACACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp GGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTCCTCTATAACCTGGGTCTGTGGCTaGATCTCAGCTTCCGAGGCT +
Preference number: 4 (lower is better)
Translates to: GQCAQAQSGEDSLAVSSITWVCG*ISASEA
Trigger: AGCCTCGGAAGCTGAGATCCAGCCACAGACCCAGGT...TATAGAGGACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp GGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCACCTGGGTCTGTGGCTaGATCTCAGCTTCCGAGGCT +
Preference number: 4 (lower is better)
Translates to: GGQGSCPSCCELPSRDVLTWVCG*ISASEA
Trigger: AGCCTCGGAAGCTGAGATCCAGCCACAGACCCAGGT...GAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CCA 90 bp GTCACTATTTCCTCTGGAGCACCCACCCTAACCCCTGTGCCTGGCTCTCTACTGTGTGACCTGGGTCTGTaGCTGGATCTCAGCTTCCGA +
Preference number: 4 (lower is better)
Translates to: VTISSGAPTLTPVPGSLLCDLGL*LDLSFR
Trigger: TCGGAAGCTGAGATCCAGCCACAGACCCAGGTCACA...CAGTAGAGAGCCAGGCACAGGGGTTAGGGTGGGTGCTCCAGAGGAAATAGTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471863.5
CDS-3UTR CCA 90 bp GTCAAGGCCACTTCTTCTTGGATCTCTGCTGAGGGCTGCCCGTTCTGCAAAGGCGGGTGCCCATCAATGTaGCAACGAAGTGTGACCTGG +
Preference number: 4 (lower is better)
Translates to: VKATSSWISAEGCPFCKGGCPSM*QRSVTW
Trigger: CCAGGTCACACTTCGTTGCCACATTGATGGGCACCC...GCCTTTGCAGAACGGGCAGCCCTCAGCAGAGATCCAAGAAGAAGTGGCCTTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR CCA 90 bp CAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCCTCAAGGTGAAGTTCTaGCTGCTGCAAGCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: QGSCPSCCELPSRDVLPCLKVKF*LLQAWP
Trigger: TGGCCAGGCTTGCAGCAGCCAGAACTTCACCTTGAG...GCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000481273.5
CDS-3UTR CCA 90 bp TCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTCCTCTATAATGCTACTACCACGTCCTaGGGTGCCAGCACCACCCTG +
Preference number: 4 (lower is better)
Translates to: SVCTSPEWGGLTCCVLYNATTTS*GASTTL
Trigger: CAGGGTGGTGCTGGCACCCCAGGACGTGGTAGTAGC...ATTATAGAGGACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp GGAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTGCTGAGAACTGGCAATaGAACATGGCCTCCTCATAC +
Preference number: 4 (lower is better)
Translates to: GRRGSGSVCTSPEWGGLTAENWQ*NMASSY
Trigger: GTATGAGGAGGCCATGTTCCATTGCCAGTTCTCAGC...AGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp GGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCGGCTGGGCTGAGAACTaGCAATGGAACATGGCCTCC +
Preference number: 4 (lower is better)
Translates to: GGQGSCPSCCELPSRDVLGWAEN*QWNMAS
Trigger: GGAGGCCATGTTCCATTGCCAGTTCTCAGCCCAGCC...GAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CCA 90 bp AGGCTAGACCGTGGGAAGTGCATCTTATCACTTGTGCTGTGGCGTTTGTTGGTGAGGCTCGGGGGTGGCTaGGCTGAGAACTGGCAATGG +
Preference number: 4 (lower is better)
Translates to: RLDRGKCILSLVLWRLLVRLGGG*AENWQW
Trigger: CCATTGCCAGTTCTCAGCCCAGCCACCCCCGAGCCT...CACCAACAAACGCCACAGCACAAGTGATAAGATGCACTTCCCACGGTCTAGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR CCA 90 bp GTGTGCCCAGAACTTGAGAATATTAAGGAACTCCCCACAAACCCAGCTCATCCCGGCTCTGCGGAGGTGTaGGGGGCGACTGCGGTTAGT +
Preference number: 4 (lower is better)
Translates to: VCPELENIKELPTNPAHPGSAEV*GATAVS
Trigger: ACTAACCGCAGTCGCCCCCCACACCTCCGCAGAGCC...GGGATGAGCTGGGTTTGTGGGGAGTTCCTTAATATTCTCAAGTTCTGGGCACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp TGTGTCCTCTATAATCCTGGTCTAGACCCCCAAGTGGGACCAGTGGGCCAAGAGGCAGCAGAGACCCGTTaGCAAACACTGTGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: CVLYNPGLDPQVGPVGQEAAETR*QTLWLC
Trigger: GCAGAGCCACAGTGTTTGCCAACGGGTCTCTGCTGC...CTCTTGGCCCACTGGTCCCACTTGGGGGTCTAGACCAGGATTATAGAGGACACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp ATGCCCACCCACCCCACGCTGCAATTACATATAAAAGCCGCCCGTGGTGCATACGCAGCAGAGACCCGTTaGCAAACACTGTGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: MPTHPTLQLHIKAARGAYAAETR*QTLWLC
Trigger: GCAGAGCCACAGTGTTTGCCAACGGGTCTCTGCTGC...GTATGCACCACGGGCGGCTTTTATATGTAATTGCAGCGTGGGGTGGGTGGGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp CAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCGCAGCAGAGACCCGTTaGCAAACACTGTGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: QEDRDLAHHAVSFPLEMSAAETR*QTLWLC
Trigger: GCAGAGCCACAGTGTTTGCCAACGGGTCTCTGCTGC...GGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CCA 90 bp GAGGTGGCAGGGAAAACTGCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCCACTTTCAGCAATATTaGCCAACACCAGCTCGTGGC +
Preference number: 4 (lower is better)
Translates to: EVAGKTAQLKALVAQFGSHFQQY*PTPARG
Trigger: GCCACGAGCTGGTGTTGGCCAATATTGCTGAAAGTG...GGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCCACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp ATGCCCACCCACCCCACGCTGCAATTACATATAAAAGCCGCCCGTGGTGCATACTCCAGCTGGCTGTCTTaGGGCTTCTTCAGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: MPTHPTLQLHIKAARGAYSSWLS*GFFSQE
Trigger: CTCCTGGCTGAAGAAGCCCCAAGACAGCCAGCTGGA...GTATGCACCACGGGCGGCTTTTATATGTAATTGCAGCGTGGGGTGGGTGGGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp GGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCTCCAGCTGGCTGTCTTaGGGCTTCTTCAGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: GGQGSCPSCCELPSRDVLSSWLS*GFFSQE
Trigger: CTCCTGGCTGAAGAAGCCCCAAGACAGCCAGCTGGA...GAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR CCA 90 bp TGTGTCCTCTATAATCCTGGTCTAGACCCCCAAGTGGGACCAGTGGGCCAAGAGTCCAGCTGGCTGTCTTaGGGCTTCTTCAGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: CVLYNPGLDPQVGPVGQESSWLS*GFFSQE
Trigger: CTCCTGGCTGAAGAAGCCCCAAGACAGCCAGCTGGA...CTCTTGGCCCACTGGTCCCACTTGGGGGTCTAGACCAGGATTATAGAGGACACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp GGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCAGCTTTTCCAGCACTTaGACACGGGCTTGCGCCTCG +
Preference number: 4 (lower is better)
Translates to: GGQGSCPSCCELPSRDVLSFSST*TRACAS
Trigger: CGAGGCGCAAGCCCGTGTCCAAGTGCTGGAAAAGCT...GAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CCA 90 bp ATGCCCACCCACCCCACGCTGCAATTACATATAAAAGCCGCCCGTGGTGCATACAGCTTTTCCAGCACTTaGACACGGGCTTGCGCCTCG +
Preference number: 4 (lower is better)
Translates to: MPTHPTLQLHIKAARGAYSFSST*TRACAS
Trigger: CGAGGCGCAAGCCCGTGTCCAAGTGCTGGAAAAGCT...GTATGCACCACGGGCGGCTTTTATATGTAATTGCAGCGTGGGGTGGGTGGGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp CCAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCAGCTTTTCCAGCACTTaGACACGGGCTTGCGCCTCG +
Preference number: 4 (lower is better)
Translates to: PGGQGSCPSCCELPSRDVSFSST*TRACAS
Trigger: CGAGGCGCAAGCCCGTGTCCAAGTGCTGGAAAAGCT...GACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CCA 90 bp CAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCCTGCTGTGGCTGGGGTaGTGGTGTGAACTTGAGCTT +
Preference number: 4 (lower is better)
Translates to: QGSCPSCCELPSRDVLPCLLWLG*WCELEL
Trigger: AAGCTCAAGTTCACACCACCACCCCAGCCACAGCAG...GCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CCA 90 bp TTCCCAGCCTGCAAATCTGCCAGTACTTCATCATCTGCCTGCCCACCATGGGGCATGCACTGCTGTGGCTaGGGTGGTGGTGTGAACTTG +
Preference number: 4 (lower is better)
Translates to: FPACKSASTSSSACPPWGMHCCG*GGGVNL
Trigger: CAAGTTCACACCACCACCCCAGCCACAGCAGTGCAT...GCCCCATGGTGGGCAGGCAGATGATGAAGTACTGGCAGATTTGCAGGCTGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR CCA 90 bp CCAGAAATTGGGGTTACCTGTGGCACCCACACTGTCCCTGATAGAGGAAGAGGTGGCCCTGCGGCCCGTTaGAGGCAATGCAAGTGTAGT +
Preference number: 4 (lower is better)
Translates to: PEIGVTCGTHTVPDRGRGGPAAR*RQCKCS
Trigger: ACTACACTTGCATTGCCTCCAACGGGCCGCAGGGCC...ACCTCTTCCTCTATCAGGGACAGTGTGGGTGCCACAGGTAACCCCAATTTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp ACCTTCACTTGTCTCTGGGCACTGACCAGGCAGTTACGCGCAGCCAAGTCCTTAACAGTGAGCTGGACATaGGCACGAATCTGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: TFTCLWALTRQLRAAKSLTVSWT*ARIWPC
Trigger: GCAGGGCCAGATTCGTGCCCATGTCCAGCTCACTGT...TAAGGACTTGGCTGCGCGTAACTGCCTGGTCAGTGCCCAGAGACAAGTGAAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR CCA 90 bp AGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCCACTGCCACAGTGAGCTaGACATGGGCACGAATCTGG +
Preference number: 4 (lower is better)
Translates to: RDLAHHAVSFPLEMSSPATATVS*TWARIW
Trigger: CCAGATTCGTGCCCATGTCCAGCTCACTGTGGCAGT...GGCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CCA 90 bp GGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCAGGGCTGTGTGGCCCTaGTACACAGTCGTACGCTCT +
Preference number: 4 (lower is better)
Translates to: GGQGSCPSCCELPSRDVLRAVWP*YTVVRS
Trigger: AGAGCGTACGACTGTGTACCAGGGCCACACAGCCCT...GAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CCA 90 bp CAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCAGGGCTGTGTGGCCCTaGTACACAGTCGTACGCTCT +
Preference number: 4 (lower is better)
Translates to: QEDRDLAHHAVSFPLEMSRAVWP*YTVVRS
Trigger: AGAGCGTACGACTGTGTACCAGGGCCACACAGCCCT...GGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CCA 90 bp GAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCAGGGCTGTGTGGCCCTaGTACACAGTCGTACGCTCT +
Preference number: 4 (lower is better)
Translates to: EDRDLAHHAVSFPLEMSSRAVWP*YTVVRS
Trigger: AGAGCGTACGACTGTGTACCAGGGCCACACAGCCCT...GGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CCA 90 bp AGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCCTGCAGTAGGGCTGTGTaGCCCTGGTACACAGTCGTA +
Preference number: 4 (lower is better)
Translates to: RDLAHHAVSFPLEMSSPACSRAV*PWYTVV
Trigger: TACGACTGTGTACCAGGGCCACACAGCCCTACTGCA...GGCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CCA 90 bp GAAGTTGAAGGCCAGAAATTGGGGTTACCTGTGGCACCCACACTGTCCCTGATATGGGTCCCAGCTTGGTaGGGTCCAGGATGCGGTCCT +
Preference number: 4 (lower is better)
Translates to: EVEGQKLGLPVAPTLSLIWVPAW*GPGCGP
Trigger: AGGACCGCATCCTGGACCCCACCAAGCTGGGACCCA...TATCAGGGACAGTGTGGGTGCCACAGGTAACCCCAATTTCTGGCCTTCAACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000470019.5
CDS-3UTR CCA 90 bp GGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTCCTCTATAGGAAGATGTGCATCCTaGGTCCCAGCTTGGTGGGGT +
Preference number: 4 (lower is better)
Translates to: GQCAQAQSGEDSLAVSSIGRCAS*VPAWWG
Trigger: ACCCCACCAAGCTGGGACCCAGGATGCACATCTTCC...TATAGAGGACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000470019.5
CDS-3UTR CCA 90 bp CAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCGGAAGATGTGCATCCTaGGTCCCAGCTTGGTGGGGT +
Preference number: 4 (lower is better)
Translates to: QEDRDLAHHAVSFPLEMSGRCAS*VPAWWG
Trigger: ACCCCACCAAGCTGGGACCCAGGATGCACATCTTCC...GGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CCA 90 bp GGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCGCTTCTGCAGCCGCTTaGCTTTGCAGCGCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: GGQGSCPSCCELPSRDVLASAAA*LCSASC
Trigger: GCAAGAAGCGCTGCAAAGCCAAGCGGCTGCAGAAGC...GAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CCA 90 bp TGTGTCCTCTATAATCCTGGTCTAGACCCCCAAGTGGGACCAGTGGGCCAAGAGGCTTCTGCAGCCGCTTaGCTTTGCAGCGCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: CVLYNPGLDPQVGPVGQEASAAA*LCSASC
Trigger: GCAAGAAGCGCTGCAAAGCCAAGCGGCTGCAGAAGC...CTCTTGGCCCACTGGTCCCACTTGGGGGTCTAGACCAGGATTATAGAGGACACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp CAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCGCTTCTGCAGCCGCTTaGCTTTGCAGCGCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: QEDRDLAHHAVSFPLEMSASAAA*LCSASC
Trigger: GCAAGAAGCGCTGCAAAGCCAAGCGGCTGCAGAAGC...GGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CCA 90 bp CAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCGGCCGGAGCCCAAGCTaGTCAAGGCCACTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: QEDRDLAHHAVSFPLEMSGRSPS*SRPLLL
Trigger: AAGAAGAAGTGGCCTTGACCAGCTTGGGCTCCGGCC...GGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CCA 90 bp GAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCGGCCGGAGCCCAAGCTaGTCAAGGCCACTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: EDRDLAHHAVSFPLEMSSGRSPS*SRPLLL
Trigger: AAGAAGAAGTGGCCTTGACCAGCTTGGGCTCCGGCC...GGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CCA 90 bp AAAGCCGCCCGTGGTGCATACAAAAAGGGCGGTTTATATAGTGTCAAAAGCTCCTGCTGTGGCGTTTGTTaGTGGCCGCGGGGCCGGAGC +
Preference number: 4 (lower is better)
Translates to: KAARGAYKKGGLYSVKSSCCGVC*WPRGRS
Trigger: GCTCCGGCCCCGCGGCCACCAACAAACGCCACAGCA...GGAGCTTTTGACACTATATAAACCGCCCTTTTTGTATGCACCACGGGCGGCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp GAAGTGCATCTTATCACTTGTGCTGTGGCGTTTGTTGGTGGCCGCGGGGCCGGATTATCACTTGTGCTGTaGCGTTTGTTGGTGGCCGCG +
Preference number: 4 (lower is better)
Translates to: EVHLITCAVAFVGGRGAGLSLVL*RLLVAA
Trigger: CGCGGCCACCAACAAACGCCACAGCACAAGTGATAA...TCCGGCCCCGCGGCCACCAACAAACGCCACAGCACAAGTGATAAGATGCACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
CDS-3UTR CCA 90 bp GCAGTAGAACATGAGGCCCAGCACGGCAATGATGTAGGCCACAGCGGCACCCACCTGCAGGCTAGACCGTaGGAAGTGCATCTTATCACT +
Preference number: 4 (lower is better)
Translates to: AVEHEAQHGNDVGHSGTHLQARP*EVHLIT
Trigger: AGTGATAAGATGCACTTCCCACGGTCTAGCCTGCAG...GTGGGTGCCGCTGTGGCCTACATCATTGCCGTGCTGGGCCTCATGTTCTACTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
CDS-3UTR CCA 90 bp CTTATGCACAAAGCGGTTGTTGGACAGGTGCTCCATGCCCAGGGCTACCTGGGTGCACAAAGCGGTTGTTaGACAGGTGCTCCATGCCCA +
Preference number: 4 (lower is better)
Translates to: LMHKAVVGQVLHAQGYLGAQSGC*TGAPCP
Trigger: TGGGCATGGAGCACCTGTCCAACAACCGCTTTGTGC...ACCCAGGTAGCCCTGGGCATGGAGCACCTGTCCAACAACCGCTTTGTGCATAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
CDS-3UTR CCA 90 bp CAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCGCACAAAGCGGTTGTTaGACAGGTGCTCCATGCCCA +
Preference number: 4 (lower is better)
Translates to: QGSCPSCCELPSRDVLPCAQSGC*TGAPCP
Trigger: TGGGCATGGAGCACCTGTCCAACAACCGCTTTGTGC...GCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR CCA 90 bp ACTTCTTCTTGGATCTCTGCTGAGGGCTGCCCGTTCTGCAAAGGCCCACCGTTGGCACAAAGCGGTTGTTaGACAGGTGCTCCATGCCCA +
Preference number: 4 (lower is better)
Translates to: TSSWISAEGCPFCKGPPLAQSGC*TGAPCP
Trigger: TGGGCATGGAGCACCTGTCCAACAACCGCTTTGTGC...CAACGGTGGGCCTTTGCAGAACGGGCAGCCCTCAGCAGAGATCCAAGAAGAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR CCA 90 bp GGAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTACCTTCACTTGTCTCTaGGCACTGACCAGGCAGTTA +
Preference number: 4 (lower is better)
Translates to: GRRGSGSVCTSPEWGGLTTFTCL*ALTRQL
Trigger: TAACTGCCTGGTCAGTGCCCAGAGACAAGTGAAGGT...AGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp GGCAGGTGTAGACACCAGCATCACTTTCAGCAATATTGGCCAACACCAGCTCGTAGTCACCCTCCAGGATaGCCTCGGGGGACATCCAGC +
Preference number: 4 (lower is better)
Translates to: GRCRHQHHFQQYWPTPARSHPPG*PRGTSS
Trigger: GCTGGATGTCCCCCGAGGCCATCCTGGAGGGTGACT...ACGAGCTGGTGTTGGCCAATATTGCTGAAAGTGATGCTGGTGTCTACACCTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR CCA 90 bp CAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCTCTGCCTGCCCACCATaGGGCATCTCTCCATGTGTA +
Preference number: 4 (lower is better)
Translates to: QGSCPSCCELPSRDVLPCSACPP*GISPCV
Trigger: TACACATGGAGAGATGCCCCATGGTGGGCAGGCAGA...GCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR CCA 90 bp TGTGTCCTCTATAATCCTGGTCTAGACCCCCAAGTGGGACCAGTGGGCCAAGAGTCAGCCGATAGAGTTTaGAAGGGCAGCCCTCGGGCT +
Preference number: 4 (lower is better)
Translates to: CVLYNPGLDPQVGPVGQESADRV*KGSPRA
Trigger: AGCCCGAGGGCTGCCCTTCCAAACTCTATCGGCTGA...CTCTTGGCCCACTGGTCCCACTTGGGGGTCTAGACCAGGATTATAGAGGACACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp GGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTCCTCTATATCAGCCGATAGAGTTTaGAAGGGCAGCCCTCGGGCT +
Preference number: 4 (lower is better)
Translates to: GQCAQAQSGEDSLAVSSISADRV*KGSPRA
Trigger: AGCCCGAGGGCTGCCCTTCCAAACTCTATCGGCTGA...TATAGAGGACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp GAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCTCAGCCGATAGAGTTTaGAAGGGCAGCCCTCGGGCT +
Preference number: 4 (lower is better)
Translates to: EDRDLAHHAVSFPLEMSSSADRV*KGSPRA
Trigger: AGCCCGAGGGCTGCCCTTCCAAACTCTATCGGCTGA...GGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR CCA 90 bp GGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCTAGTCGCCCAGTTTaGGTCCAAGTCAGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: GGQGSCPSCCELPSRDVLPSRPV*VQVSLP
Trigger: TGGGAGGCTGACTTGGACCCAAACTGGGCGACTAGG...GAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp ATGCCCACCCACCCCACGCTGCAATTACATATAAAAGCCGCCCGTGGTGCATACCCTAGTCGCCCAGTTTaGGTCCAAGTCAGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: MPTHPTLQLHIKAARGAYPSRPV*VQVSLP
Trigger: TGGGAGGCTGACTTGGACCCAAACTGGGCGACTAGG...GTATGCACCACGGGCGGCTTTTATATGTAATTGCAGCGTGGGGTGGGTGGGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp GAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTAGTCGCCCAGTTTaGGTCCAAGTCAGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: EDRDLAHHAVSFPLEMSSPSRPV*VQVSLP
Trigger: TGGGAGGCTGACTTGGACCCAAACTGGGCGACTAGG...GGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp CAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCCCTAGTCGCCCAGTTTaGGTCCAAGTCAGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: QEDRDLAHHAVSFPLEMSPSRPV*VQVSLP
Trigger: TGGGAGGCTGACTTGGACCCAAACTGGGCGACTAGG...GGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp ACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTTGAAGGCCAGAAATTaGGGTTACCTGTGGCACCCA +
Preference number: 4 (lower is better)
Translates to: TWVWVSVHKPRVGRTHLLLKARN*GYLWHP
Trigger: TGGGTGCCACAGGTAACCCCAATTTCTGGCCTTCAA...CAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp TTCCCAGCCTGCAAATCTGCCAGTACTTCATCATCTGCCTGCCCACCATGGGGCGATGAGTGGCAGAGTTaGACCCGGTCAAGGGGAGAA +
Preference number: 4 (lower is better)
Translates to: FPACKSASTSSSACPPWGDEWQS*TRSRGE
Trigger: TTCTCCCCTTGACCGGGTCCAACTCTGCCACTCATC...GCCCCATGGTGGGCAGGCAGATGATGAAGTACTGGCAGATTTGCAGGCTGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR CCA 90 bp GGTGGCAGGGAAAACTGCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAAAGTTGGCAGATGAGTaGCAGAGTTGGACCCGGTCA +
Preference number: 4 (lower is better)
Translates to: GGRENCPAQSPSRPVWVQKLADE*QSWTRS
Trigger: TGACCGGGTCCAACTCTGCCACTCATCTGCCAACTT...TTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp TGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTAAGTTGGCAGATGAGTaGCAGAGTTGGACCCGGTCA +
Preference number: 4 (lower is better)
Translates to: WVWVSVHKPRVGRTHLLCKLADE*QSWTRS
Trigger: TGACCGGGTCCAACTCTGCCACTCATCTGCCAACTT...ACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp ACAAAGCGGTTGTTGGACAGGTGCTCCATGCCCAGGGCTACCTGGGTGCATAGGAAGTTGGCAGATGAGTaGCAGAGTTGGACCCGGTCA +
Preference number: 4 (lower is better)
Translates to: TKRLLDRCSMPRATWVHRKLADE*QSWTRS
Trigger: TGACCGGGTCCAACTCTGCCACTCATCTGCCAACTT...CCTATGCACCCAGGTAGCCCTGGGCATGGAGCACCTGTCCAACAACCGCTTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR CCA 90 bp GCGCAGCCAAGTCCTTATGCACAAAGCGGTTGTTGGACAGGTGCTCCATGCCCATGCACAAGCCCAGAGTaGGGAGGACTCACTTGCTGT +
Preference number: 4 (lower is better)
Translates to: AQPSPYAQSGCWTGAPCPCTSPE*GGLTCC
Trigger: ACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCA...TGGGCATGGAGCACCTGTCCAACAACCGCTTTGTGCATAAGGACTTGGCTGCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR CCA 90 bp CCAGAAATTGGGGTTACCTGTGGCACCCACACTGTCCCTGATAGAGGAAGAGGTGGGAAGACGTGGGTCTaGGTCAGTGTGCACAAGCCC +
Preference number: 4 (lower is better)
Translates to: PEIGVTCGTHTVPDRGRGGKTWV*VSVHKP
Trigger: GGGCTTGTGCACACTGACCCAGACCCACGTCTTCCC...ACCTCTTCCTCTATCAGGGACAGTGTGGGTGCCACAGGTAACCCCAATTTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp ATCTGCCTGCCCACCATGGGGCATCTCTCCATGTGTAAACACTTCCCACATCAGAGGGTGGGGAAGACGTaGGTCTGGGTCAGTGTGCAC +
Preference number: 4 (lower is better)
Translates to: ICLPTMGHLSMCKHFPHQRVGKT*VWVSVH
Trigger: GTGCACACTGACCCAGACCCACGTCTTCCCCACCCT...CTGATGTGGGAAGTGTTTACACATGGAGAGATGCCCCATGGTGGGCAGGCAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR CCA 90 bp CCAGAAATTGGGGTTACCTGTGGCACCCACACTGTCCCTGATAGAGGAAGAGGTAGGGTGGGGAAGACGTaGGTCTGGGTCAGTGTGCAC +
Preference number: 4 (lower is better)
Translates to: PEIGVTCGTHTVPDRGRGRVGKT*VWVSVH
Trigger: GTGCACACTGACCCAGACCCACGTCTTCCCCACCCT...ACCTCTTCCTCTATCAGGGACAGTGTGGGTGCCACAGGTAACCCCAATTTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp GAGGTGGCAGGGAAAACTGCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCTATAAAAGCCGCCCGTaGTGCATACAAAAAGGGCGG +
Preference number: 4 (lower is better)
Translates to: EVAGKTAQLKALVAQFGSYKSRP*CIQKGR
Trigger: CCGCCCTTTTTGTATGCACCACGGGCGGCTTTTATA...GGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCCACCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp GTGGGGAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTACAACAATAAAAGTGTaGGGTAAGGATGGCCCACCC +
Preference number: 4 (lower is better)
Translates to: VGKTWVWVSVHKPRVGRTTTIKV*GKDGPP
Trigger: GGGTGGGCCATCCTTACCCCACACTTTTATTGTTGT...AGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTCCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp CCAGAAATTGGGGTTACCTGTGGCACCCACACTGTCCCTGATAGAGGAAGAGGTGGAGCCGCACCACGTTaGCGTGGTTCAGCTTCCCAA +
Preference number: 4 (lower is better)
Translates to: PEIGVTCGTHTVPDRGRGGAAPR*RGSASQ
Trigger: TTGGGAAGCTGAACCACGCCAACGTGGTGCGGCTCC...ACCTCTTCCTCTATCAGGGACAGTGTGGGTGCCACAGGTAACCCCAATTTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp AGGCCAGAAATTGGGGTTACCTGTGGCACCCACACTGTCCCTGATAGAGGAAGAGTCTGTCACCCACTCTaGGAGGCTGCTCCCATTGGC +
Preference number: 4 (lower is better)
Translates to: RPEIGVTCGTHTVPDRGRVCHPL*EAAPIG
Trigger: GCCAATGGGAGCAGCCTCCCAGAGTGGGTGACAGAC...TCTTCCTCTATCAGGGACAGTGTGGGTGCCACAGGTAACCCCAATTTCTGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349241.6
CDS-3UTR CCA 90 bp CTGCATCAGCCGATAGAGTTTGGAAGGGCAGCCCTCGGGCTGAGGAAGTCTAGCCCACTCTTGCCAACTTaGGTCCAATCACAGTGCTCC +
Preference number: 4 (lower is better)
Translates to: LHQPIEFGRAALGLRKSSPLLPT*VQSQCS
Trigger: GGAGCACTGTGATTGGACCCAAGTTGGCAAGAGTGG...GCTAGACTTCCTCAGCCCGAGGGCTGCCCTTCCAAACTCTATCGGCTGATGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461389.1
CDS-3UTR CCA 90 bp CAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCAAGAAACTCCCCATCTaGGCCCGAGAGCCAGCAACT +
Preference number: 4 (lower is better)
Translates to: QGSCPSCCELPSRDVLPCKKLPI*AREPAT
Trigger: AGTTGCTGGCTCTCGGGCCCAGATGGGGAGTTTCTT...GCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481273.5
CDS-3UTR CCA 90 bp CAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCCACGGTGGGTGCGGATaGTCTTTTCTCCCCCGACAA +
Preference number: 4 (lower is better)
Translates to: QEDRDLAHHAVSFPLEMSHGGCG*SFLPRQ
Trigger: TTGTCGGGGGAGAAAAGACCATCCGCACCCACCGTG...GGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481273.5
CDS-3UTR CCA 90 bp GAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCCTGCCGGGTGGGGTaGGGAATTCCTTTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: EDRDLAHHAVSFPLEMSSPCRVG*GIPFSP
Trigger: TGGAGAAAAAGGAATTCCCCACCCCACCCGGCAGGG...GGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000481273.5
CDS-3UTR CCA 90 bp TGGGGCTACAGTTACCAGATACTAAGTGCCTGCCTGGTCCCTGGCAGGTCAAGTTGCCTGCCTGGTCCCTaGCAGGTCAAGTCTGACACT +
Preference number: 4 (lower is better)
Translates to: WGYSYQILSACLVPGRSSCLPGP*QVKSDT
Trigger: AGTGTCAGACTTGACCTGCCAGGGACCAGGCAGGCA...ACTTGACCTGCCAGGGACCAGGCAGGCACTTAGTATCTGGTAACTGTAGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476760.1
CDS-3UTR TCA 90 bp CAGATGAGTGGCAGAGTTGGACCCGGTCAAGGGGAGAAGTTGAAGGCCAGAAATTCCGCTCCTTGCTGCTaGCTGTGTGGTTGCTCTGAC +
Preference number: 4 (lower is better)
Translates to: QMSGRVGPGQGEKLKARNSAPCC*LCGCSD
Trigger: GTCAGAGCAACCACACAGTCAGCAGCAAGGAGCGGA...ATTTCTGGCCTTCAACTTCTCCCCTTGACCGGGTCCAACTCTGCCACTCATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
CDS-3UTR TCA 90 bp ACAAAGCGGTTGTTGGACAGGTGCTCCATGCCCAGGGCTACCTGGGTGCATAGGTCAATCTCTGCTAGGTaGAGTGTGGCTTCCAGGATG +
Preference number: 4 (lower is better)
Translates to: TKRLLDRCSMPRATWVHRSISAR*SVASRM
Trigger: CATCCTGGAAGCCACACTTCACCTAGCAGAGATTGA...CCTATGCACCCAGGTAGCCCTGGGCATGGAGCACCTGTCCAACAACCGCTTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR TCA 90 bp GCCTGCAAATCTGCCAGTACTTCATCATCTGCCTGCCCACCATGGGGCATCTCTACACCTCCACGCTGTTaGTGCGCAAGGTCCCATTCT +
Preference number: 4 (lower is better)
Translates to: ACKSASTSSSACPPWGISTPPRC*CARSHS
Trigger: AGAATGGGACCTTGCGCATCAACAGCGTGGAGGTGT...AGAGATGCCCCATGGTGGGCAGGCAGATGATGAAGTACTGGCAGATTTGCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR TCA 90 bp GGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTCCTCTATAACACCTCCACGCTGTTaGTGCGCAAGGTCCCATTCT +
Preference number: 4 (lower is better)
Translates to: GQCAQAQSGEDSLAVSSITPPRC*CARSHS
Trigger: AGAATGGGACCTTGCGCATCAACAGCGTGGAGGTGT...TATAGAGGACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR TCA 90 bp CCAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCACACCTCCACGCTGTTaGTGCGCAAGGTCCCATTCT +
Preference number: 4 (lower is better)
Translates to: PGGQGSCPSCCELPSRDVTPPRC*CARSHS
Trigger: AGAATGGGACCTTGCGCATCAACAGCGTGGAGGTGT...GACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR TCA 90 bp TGTGTCCTCTATAATCCTGGTCTAGACCCCCAAGTGGGACCAGTGGGCCAAGAGTTCTTGGATCTCTGCTaGGGGCTGCCCGTTCTGCAA +
Preference number: 4 (lower is better)
Translates to: CVLYNPGLDPQVGPVGQEFLDLC*GLPVLQ
Trigger: TTGCAGAACGGGCAGCCCTCAGCAGAGATCCAAGAA...CTCTTGGCCCACTGGTCCCACTTGGGGGTCTAGACCAGGATTATAGAGGACACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR TCA 90 bp CCAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCTTCTTGGATCTCTGCTaGGGGCTGCCCGTTCTGCAA +
Preference number: 4 (lower is better)
Translates to: PGGQGSCPSCCELPSRDVFLDLC*GLPVLQ
Trigger: TTGCAGAACGGGCAGCCCTCAGCAGAGATCCAAGAA...GACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000481273.5
CDS-3UTR TCA 90 bp AGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCCCCTTCTGCTTGGTGCTaGGGGGCTGTGACTTCAATT +
Preference number: 4 (lower is better)
Translates to: RDLAHHAVSFPLEMSSPAPSAWC*GAVTSI
Trigger: AATTGAAGTCACAGCCCCTCAGCACCAAGCAGAAGG...GGCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR TCA 90 bp CTTATGCACAAAGCGGTTGTTGGACAGGTGCTCCATGCCCAGGGCTACCTGGGTCCTTCTGCTTGGTGCTaGGGGGCTGTGACTTCAATT +
Preference number: 4 (lower is better)
Translates to: LMHKAVVGQVLHAQGYLGPSAWC*GAVTSI
Trigger: AATTGAAGTCACAGCCCCTCAGCACCAAGCAGAAGG...ACCCAGGTAGCCCTGGGCATGGAGCACCTGTCCAACAACCGCTTTGTGCATAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
CDS-3UTR TCA 90 bp TGTGTCCTCTATAATCCTGGTCTAGACCCCCAAGTGGGACCAGTGGGCCAAGAGGCCAGGCACTTAGGATaGGGAAAGGAGAGAAGGGTG +
Preference number: 4 (lower is better)
Translates to: CVLYNPGLDPQVGPVGQEARHLG*GKERRV
Trigger: CACCCTTCTCTCCTTTCCTCATCCTAAGTGCCTGGC...CTCTTGGCCCACTGGTCCCACTTGGGGGTCTAGACCAGGATTATAGAGGACACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR TCA 90 bp GGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCGCCAGGCACTTAGGATaGGGAAAGGAGAGAAGGGTG +
Preference number: 4 (lower is better)
Translates to: GGQGSCPSCCELPSRDVLARHLG*GKERRV
Trigger: CACCCTTCTCTCCTTTCCTCATCCTAAGTGCCTGGC...GAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR TCA 90 bp CAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCGCCAGGCACTTAGGATaGGGAAAGGAGAGAAGGGTG +
Preference number: 4 (lower is better)
Translates to: QEDRDLAHHAVSFPLEMSARHLG*GKERRV
Trigger: CACCCTTCTCTCCTTTCCTCATCCTAAGTGCCTGGC...GGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR TCA 90 bp CAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCTCCTCAGGAACTGCTTaGGGTCTCCCAGATCCACAT +
Preference number: 4 (lower is better)
Translates to: QGSCPSCCELPSRDVLPCSSGTA*GLPDPH
Trigger: ATGTGGATCTGGGAGACCTCAAGCAGTTCCTGAGGA...GCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR TCA 90 bp CCAGAAATTGGGGTTACCTGTGGCACCCACACTGTCCCTGATAGAGGAAGAGGTGGCTTGTCTTTCCACTaGATCAGCGGCTTGGGGTCC +
Preference number: 4 (lower is better)
Translates to: PEIGVTCGTHTVPDRGRGGLSFH*ISGLGS
Trigger: GGACCCCAAGCCGCTGATTCAGTGGAAAGACAAGCC...ACCTCTTCCTCTATCAGGGACAGTGTGGGTGCCACAGGTAACCCCAATTTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352931.6
CDS-3UTR GCA 90 bp GAGGTGGCAGGGAAAACTGCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCCAGGACCACAGGACCTaGCTCAATCCATTTGATGTT +
Preference number: 4 (lower is better)
Translates to: EVAGKTAQLKALVAQFGSQDHRT*LNPFDV
Trigger: AACATCAAATGGATTGAGGCAGGTCCTGTGGTCCTG...GGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCCACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp CACTCTGTGCATTGGGAGCATAGTGGGACCCAGGTCTCTAGATTCCTAGTCTATTCCTCAAAGAGCCACTaGAGGCTCGGGGGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: HSVHWEHSGTQVSRFLVYSSKSH*RLGGGW
Trigger: CCAGCCACCCCCGAGCCTGCAGTGGCTCTTTGAGGA...ATAGACTAGGAATCTAGAGACCTGGGTCCCACTATGCTCCCAATGCACAGAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471863.5
CDS-3UTR GCA 90 bp TCTGCCAGTACTTCATCATCTGCCTGCCCACCATGGGGCATCTCTCCATGTGTATCTGCCCCTGGCCAATaGAGCGGTAGATCCCTGCAT +
Preference number: 4 (lower is better)
Translates to: SASTSSSACPPWGISPCVSAPGQ*SGRSLH
Trigger: ATGCAGGGATCTACCGCTGCATTGGCCAGGGGCAGA...TACACATGGAGAGATGCCCCATGGTGGGCAGGCAGATGATGAAGTACTGGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR GCA 90 bp GAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCTCAAACTCCATGCACTaGTGTGGCTGGGGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: EDRDLAHHAVSFPLEMSSSNSMH*CGWGGG
Trigger: ACCACCACCCCAGCCACAGCAGTGCATGGAGTTTGA...GGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR GCA 90 bp GCCTGCAAATCTGCCAGTACTTCATCATCTGCCTGCCCACCATGGGGCATCTCTCCTTGTCAAACTCCATaGACTGCTGTGGCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: ACKSASTSSSACPPWGISPCQTP*TAVAGV
Trigger: CACCCCAGCCACAGCAGTGCATGGAGTTTGACAAGG...AGAGATGCCCCATGGTGGGCAGGCAGATGATGAAGTACTGGCAGATTTGCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR GCA 90 bp CAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCGAGGCTGCTCCCATCTaGCCGTTCCCACTTAATAGT +
Preference number: 4 (lower is better)
Translates to: QGSCPSCCELPSRDVLPCEAAPI*PFPLNS
Trigger: ACTATTAAGTGGGAACGGGCAGATGGGAGCAGCCTC...GCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR GCA 90 bp GGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTCCTCTATAGCCCGTTGGAGGCAATaGAAGTGTAGTTGCCAGCGT +
Preference number: 4 (lower is better)
Translates to: GQCAQAQSGEDSLAVSSIARWRQ*KCSCQR
Trigger: ACGCTGGCAACTACACTTGCATTGCCTCCAACGGGC...TATAGAGGACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp CCAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCGCCCGTTGGAGGCAATaGAAGTGTAGTTGCCAGCGT +
Preference number: 4 (lower is better)
Translates to: PGGQGSCPSCCELPSRDVARWRQ*KCSCQR
Trigger: ACGCTGGCAACTACACTTGCATTGCCTCCAACGGGC...GACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR GCA 90 bp CAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCCCAGGATGCGGTCCTTaGCTTTCCACTGAATCAGCG +
Preference number: 4 (lower is better)
Translates to: QEDRDLAHHAVSFPLEMSPGCGP*LSTESA
Trigger: CGCTGATTCAGTGGAAAGGCAAGGACCGCATCCTGG...GGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR GCA 90 bp GGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCAGCTGTTGCCTGCAATaGAGGTGTAGCGGCCTGAGT +
Preference number: 4 (lower is better)
Translates to: GGQGSCPSCCELPSRDVLSCCLQ*RCSGLS
Trigger: ACTCAGGCCGCTACACCTGCATTGCAGGCAACAGCT...GAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR GCA 90 bp CTTGAGAATATTAAGGAACTCCCCACAAACCCAGCTCATCCCAAGCCTAGCCCTGAGGGCTGCCCGTTCTaGAAAGGCCCACCGTTGAGG +
Preference number: 4 (lower is better)
Translates to: LENIKELPTNPAHPKPSPEGCPF*KGPPLR
Trigger: CCTCAACGGTGGGCCTTTGCAGAACGGGCAGCCCTC...AGGGCTAGGCTTGGGATGAGCTGGGTTTGTGGGGAGTTCCTTAATATTCTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp CCAGAAATTGGGGTTACCTGTGGCACCCACACTGTCCCTGATAGAGGAAGAGGTATCTCTGCTGAGGGCTaGCCGTTCTGCAAAGGCCCA +
Preference number: 4 (lower is better)
Translates to: PEIGVTCGTHTVPDRGRGISAEG*PFCKGP
Trigger: TGGGCCTTTGCAGAACGGGCAGCCCTCAGCAGAGAT...ACCTCTTCCTCTATCAGGGACAGTGTGGGTGCCACAGGTAACCCCAATTTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp ACCTCCCCAAACTCACTCTTCCCCAGCGTGGTGATGGGCTGCAGGCTAGACCGTGCATCTTATCACTTGTaGTGTGGCGTTTGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: TSPNSLFPSVVMGCRLDRASYHL*CGVCWW
Trigger: CCACCAACAAACGCCACAGCACAAGTGATAAGATGC...ACGGTCTAGCCTGCAGCCCATCACCACGCTGGGGAAGAGTGAGTTTGGGGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
CDS-3UTR GCA 90 bp GGCCGGAGCCCAAGCTGGTCAAGGCCACTTCTTCTTGGATCTCTGCTGAGGGCTGCATCTTATCACTTGTaGTGTGGCGTTTGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: GRSPSWSRPLLLGSLLRAASYHL*CGVCWW
Trigger: CCACCAACAAACGCCACAGCACAAGTGATAAGATGC...AGCCCTCAGCAGAGATCCAAGAAGAAGTGGCCTTGACCAGCTTGGGCTCCGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
CDS-3UTR GCA 90 bp GGCCGGAGCCCAAGCTGGTCAAGGCCACTTCTTCTTGGATCTCTGCTGAGGGCTCTAGACCGTGGGAAGTaGATCTTATCACTTGTGCTG +
Preference number: 4 (lower is better)
Translates to: GRSPSWSRPLLLGSLLRALDRGK*ILSLVL
Trigger: CAGCACAAGTGATAAGATGCACTTCCCACGGTCTAG...AGCCCTCAGCAGAGATCCAAGAAGAAGTGGCCTTGACCAGCTTGGGCTCCGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
CDS-3UTR GCA 90 bp ACGCGCAGCCAAGTCCTTATGCACAAAGCGGTTGTTGGACAGGTGCTCCATGCCGAAATCCTCAGGAACTaGTTGAGGTCTCCCCAGCGT +
Preference number: 4 (lower is better)
Translates to: TRSQVLMHKAVVGQVLHAEILRN*LRSPQR
Trigger: ACGCTGGGGAGACCTCAAGCAGTTCCTGAGGATTTC...GGCATGGAGCACCTGTCCAACAACCGCTTTGTGCATAAGGACTTGGCTGCGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000461389.1
CDS-3UTR GCA 90 bp CTTGGCTTTGCAGCGCTTCTTGCAGTAGAACATGAGGCCCAGCACGGCAATGATCATAGGGCCACCTTCTaGTTGGTGCTGAGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: LGFAALLAVEHEAQHGNDHRATF*LVLRGC
Trigger: ACAGCCCCTCAGCACCAAGCAGAAGGTGGCCCTATG...ATCATTGCCGTGCTGGGCCTCATGTTCTACTGCAAGAAGCGCTGCAAAGCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR GCA 90 bp TCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTCCTCTATAATCCAGGGCTACCTGGGTaGATAGGGCCACCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: SVCTSPEWGGLTCCVLYNPGLPG*IGPPSA
Trigger: AGCAGAAGGTGGCCCTATGCACCCAGGTAGCCCTGG...ATTATAGAGGACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp GAAGTTGAAGGCCAGAAATTGGGGTTACCTGTGGCACCCACACTGTCCCTGATACCAGGGCTACCTGGGTaGATAGGGCCACCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: EVEGQKLGLPVAPTLSLIPGLPG*IGPPSA
Trigger: AGCAGAAGGTGGCCCTATGCACCCAGGTAGCCCTGG...TATCAGGGACAGTGTGGGTGCCACAGGTAACCCCAATTTCTGGCCTTCAACTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp TCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTCCTCTATAATCGGTTGTTGGACAGGTaGTCCATGCCCAGGGCTACC +
Preference number: 4 (lower is better)
Translates to: SVCTSPEWGGLTCCVLYNRLLDR*SMPRAT
Trigger: GGTAGCCCTGGGCATGGAGCACCTGTCCAACAACCG...ATTATAGAGGACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp GAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCAGCCAAGTCCTTATaGACAAAGCGGTTGTTGGAC +
Preference number: 4 (lower is better)
Translates to: EDVGLGQCAQAQSGEDSLAAKSL*TKRLLD
Trigger: GTCCAACAACCGCTTTGTGCATAAGGACTTGGCTGC...AAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp TGGCAATGGAACATGGCCTCCTCATACCTCGCTACTACCACGTCCTGGGGTGCCGCAGCCAAGTCCTTATaGACAAAGCGGTTGTTGGAC +
Preference number: 4 (lower is better)
Translates to: WQWNMASSYLATTTSWGAAAKSL*TKRLLD
Trigger: GTCCAACAACCGCTTTGTGCATAAGGACTTGGCTGC...GGCACCCCAGGACGTGGTAGTAGCGAGGTATGAGGAGGCCATGTTCCATTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR GCA 90 bp GCGCAGCCAAGTCCTTATGCACAAAGCGGTTGTTGGACAGGTGCTCCATGCCCAACTTCATCATCTGCCTaGCCACCATGGGGCATCTCT +
Preference number: 4 (lower is better)
Translates to: AQPSPYAQSGCWTGAPCPTSSSA*PPWGIS
Trigger: AGAGATGCCCCATGGTGGGCAGGCAGATGATGAAGT...TGGGCATGGAGCACCTGTCCAACAACCGCTTTGTGCATAAGGACTTGGCTGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
CDS-3UTR GCA 90 bp AGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCCACTTCATCATCTGCCTaGCCACCATGGGGCATCTCT +
Preference number: 4 (lower is better)
Translates to: RDLAHHAVSFPLEMSSPATSSSA*PPWGIS
Trigger: AGAGATGCCCCATGGTGGGCAGGCAGATGATGAAGT...GGCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR GCA 90 bp CAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCACTTCATCATCTGCCTaGCCACCATGGGGCATCTCT +
Preference number: 4 (lower is better)
Translates to: QGSCPSCCELPSRDVLPCTSSSA*PPWGIS
Trigger: AGAGATGCCCCATGGTGGGCAGGCAGATGATGAAGT...GCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR GCA 90 bp AGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCCCAGTACTTCATCATCTaGCTGCCCACCATGGGGCAT +
Preference number: 4 (lower is better)
Translates to: RDLAHHAVSFPLEMSSPAQYFII*LPTMGH
Trigger: ATGCCCCATGGTGGGCAGGCAGATGATGAAGTACTG...GGCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR GCA 90 bp CTGCATCAGCCGATAGAGTTTGGAAGGGCAGCCCTCGGGCTGAGGAAGTCTAGCCTAGCCTTCCCAGCCTaGAAATCTGCCAGTACTTCA +
Preference number: 4 (lower is better)
Translates to: LHQPIEFGRAALGLRKSSLAFPA*KSASTS
Trigger: TGAAGTACTGGCAGATTTGCAGGCTGGGAAGGCTAG...GCTAGACTTCCTCAGCCCGAGGGCTGCCCTTCCAAACTCTATCGGCTGATGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
CDS-3UTR GCA 90 bp TGGCTGAACAGGGCACCGTGGCCTCCTTGTCAAACTCCATGCACTGCTGTGGCTCTAGCCTTCCCAGCCTaGAAATCTGCCAGTACTTCA +
Preference number: 4 (lower is better)
Translates to: WLNRAPWPPCQTPCTAVALAFPA*KSASTS
Trigger: TGAAGTACTGGCAGATTTGCAGGCTGGGAAGGCTAG...AGCCACAGCAGTGCATGGAGTTTGACAAGGAGGCCACGGTGCCCTGTTCAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR GCA 90 bp GGTGGCAGGGAAAACTGCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGGATCTTGCCCATCATaGTGTGAGCTTCCCTCTAGA +
Preference number: 4 (lower is better)
Translates to: GGRENCPAQSPSRPVWVQGSCPS*CELPSR
Trigger: TCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCC...TTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp GAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGGATCTTGCCCATCATaGTGTGAGCTTCCCTCTAGA +
Preference number: 4 (lower is better)
Translates to: EDVGLGQCAQAQSGEDSLGSCPS*CELPSR
Trigger: TCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCC...AAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp TGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTGGATCTTGCCCATCATaGTGTGAGCTTCCCTCTAGA +
Preference number: 4 (lower is better)
Translates to: WVWVSVHKPRVGRTHLLCGSCPS*CELPSR
Trigger: TCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCC...ACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp ACACCGAAGGCCCAGACATCAGACTTGGTAGAGAAGTCACCCTCCAGGATGGCCGGAGGACAGGGATCTTaGCCATCATGCTGTGAGCTT +
Preference number: 4 (lower is better)
Translates to: TPKAQTSDLVEKSPSRMAGGQGS*PSCCEL
Trigger: AAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCC...GGCCATCCTGGAGGGTGACTTCTCTACCAAGTCTGATGTCTGGGCCTTCGGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
CDS-3UTR GCA 90 bp AGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCCGGAGGACAGGGATCTTaGCCATCATGCTGTGAGCTT +
Preference number: 4 (lower is better)
Translates to: RDLAHHAVSFPLEMSSPAGGQGS*PSCCEL
Trigger: AAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCC...GGCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR GCA 90 bp CAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCGGAGGACAGGGATCTTaGCCATCATGCTGTGAGCTT +
Preference number: 4 (lower is better)
Translates to: QGSCPSCCELPSRDVLPCGGQGS*PSCCEL
Trigger: AAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCC...GCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR GCA 90 bp TTGTCTCTGGGCACTGACCAGGCAGTTACGCGCAGCCAAGTCCTTATGCACAAACTCAGCAATGCCTGTTaGACTAGGGCAGGGGCCTCA +
Preference number: 4 (lower is better)
Translates to: LSLGTDQAVTRSQVLMHKLSNAC*TRAGAS
Trigger: TGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAG...TTTGTGCATAAGGACTTGGCTGCGCGTAACTGCCTGGTCAGTGCCCAGAGACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
CDS-3UTR GCA 90 bp AGGCCAGAAATTGGGGTTACCTGTGGCACCCACACTGTCCCTGATAGAGGAAGACTCAGCAATGCCTGTTaGACTAGGGCAGGGGCCTCA +
Preference number: 4 (lower is better)
Translates to: RPEIGVTCGTHTVPDRGRLSNAC*TRAGAS
Trigger: TGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAG...TCTTCCTCTATCAGGGACAGTGTGGGTGCCACAGGTAACCCCAATTTCTGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp ACCTTCACTTGTCTCTGGGCACTGACCAGGCAGTTACGCGCAGCCAAGTCCTTAGGTGGCAGGGAAAACTaGCCAGCTCAAAGCCCTAGT +
Preference number: 4 (lower is better)
Translates to: TFTCLWALTRQLRAAKSLGGREN*PAQSPS
Trigger: ACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCCACC...TAAGGACTTGGCTGCGCGTAACTGCCTGGTCAGTGCCCAGAGACAAGTGAAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR GCA 90 bp GAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCGGTGGCAGGGAAAACTaGCCAGCTCAAAGCCCTAGT +
Preference number: 4 (lower is better)
Translates to: EDRDLAHHAVSFPLEMSSGGREN*PAQSPS
Trigger: ACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCCACC...GGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp GGAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTGAAAACTCCTTCATCTaGCAGGCACTTAGGATGAGG +
Preference number: 4 (lower is better)
Translates to: GRRGSGSVCTSPEWGGLTENSFI*QALRMR
Trigger: CCTCATCCTAAGTGCCTGGCAGATGAAGGAGTTTTC...AGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp GAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTAAAAGCCGCCCGTGGTaGATACAAAAAGGGCGGTTT +
Preference number: 4 (lower is better)
Translates to: EDVGLGQCAQAQSGEDSLKSRPW*IQKGRF
Trigger: AAACCGCCCTTTTTGTATGCACCACGGGCGGCTTTT...AAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp CCAGAAATTGGGGTTACCTGTGGCACCCACACTGTCCCTGATAGAGGAAGAGGTAAGTACCAGGGTCTCTaGCACTCCCTCCTCCAAGCC +
Preference number: 4 (lower is better)
Translates to: PEIGVTCGTHTVPDRGRGKYQGL*HSLLQA
Trigger: GGCTTGGAGGAGGGAGTGGCAGAGACCCTGGTACTT...ACCTCTTCCTCTATCAGGGACAGTGTGGGTGCCACAGGTAACCCCAATTTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp GGCAGGGAAAACTGCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTCTGCTCATCCTTGCTCTaGAGGCTCTTCACAAGTACC +
Preference number: 4 (lower is better)
Translates to: GRENCPAQSPSRPVWVQVCSSLL*RLFTST
Trigger: GGTACTTGTGAAGAGCCTGCAGAGCAAGGATGAGCA...GACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp CAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCGCTGCTGCTCATCCTTaGTCTGCAGGCTCTTCACAA +
Preference number: 4 (lower is better)
Translates to: QGSCPSCCELPSRDVLPCAAAHP*SAGSSQ
Trigger: TTGTGAAGAGCCTGCAGAGCAAGGATGAGCAGCAGC...GCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR GCA 90 bp CAGATGAGTGGCAGAGTTGGACCCGGTCAAGGGGAGAAGTTGAAGGCCAGAAATCTCCGGAAGTCCAGCTaGTGCTGCTCATCCTTGCTC +
Preference number: 4 (lower is better)
Translates to: QMSGRVGPGQGEKLKARNLRKSS*CCSSLL
Trigger: GAGCAAGGATGAGCAGCAGCAGCTGGACTTCCGGAG...ATTTCTGGCCTTCAACTTCTCCCCTTGACCGGGTCCAACTCTGCCACTCATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp GACACTTGGCCAAGGGCTCGGCCGCCCTTTCCATTTGCACAAGCATGCAGCAGAGCCGCCCTTTCCATTTaGACAAGCATGCAGCAGATA +
Preference number: 4 (lower is better)
Translates to: DTWPRARPPFPFAQACSRAALSI*TSMQQI
Trigger: TATCTGCTGCATGCTTGTGCAAATGGAAAGGGCGGC...TCTGCTGCATGCTTGTGCAAATGGAAAGGGCGGCCGAGCCCTTGGCCAAGTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476760.1
CDS-3UTR GCA 90 bp GGCTACAGTTACCAGATACTAAGTGCCTGCCTGGTCCCTGGCAGGTCAAGTCTGCAGATACTAAGTGCCTaGCTGGTCCCTGGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: GYSYQILSACLVPGRSSLQILSA*LVPGRS
Trigger: TGACCTGCCAGGGACCAGGCAGGCACTTAGTATCTG...CAGACTTGACCTGCCAGGGACCAGGCAGGCACTTAGTATCTGGTAACTGTAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476760.1
CDS-3UTR CCA 90 bp AGGCCAGAAATTGGGGTTACCTGTGGCACCCACACTGTCCCTGATAGAGGAAGACTCAGCTTCCGAGGCTaGATGCTTCAGGACCACAGG +
Preference number: 4 (lower is better)
Translates to: RPEIGVTCGTHTVPDRGRLSFRG*MLQDHR
Trigger: CCTGTGGTCCTGAAGCATCCAGCCTCGGAAGCTGAG...TCTTCCTCTATCAGGGACAGTGTGGGTGCCACAGGTAACCCCAATTTCTGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp CCATTTTTCTGTGAGGGCTGTCACTATTTCCTCTGGAGCACCCACCCTAACCCCACCTGGGTCTGTGGCTaGATCTCAGCTTCCGAGGCT +
Preference number: 4 (lower is better)
Translates to: PFFCEGCHYFLWSTHPNPTWVCG*ISASEA
Trigger: AGCCTCGGAAGCTGAGATCCAGCCACAGACCCAGGT...GGGGTTAGGGTGGGTGCTCCAGAGGAAATAGTGACAGCCCTCACAGAAAAATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471863.5
CDS-3UTR CCA 90 bp GGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTCCTCTATATGTGACCTGGGTCTGTaGCTGGATCTCAGCTTCCGA +
Preference number: 4 (lower is better)
Translates to: GQCAQAQSGEDSLAVSSICDLGL*LDLSFR
Trigger: TCGGAAGCTGAGATCCAGCCACAGACCCAGGTCACA...TATAGAGGACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp CCAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCTGTGACCTGGGTCTGTaGCTGGATCTCAGCTTCCGA +
Preference number: 4 (lower is better)
Translates to: PGGQGSCPSCCELPSRDVCDLGL*LDLSFR
Trigger: TCGGAAGCTGAGATCCAGCCACAGACCCAGGTCACA...GACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CCA 90 bp TTCCCAGCCTGCAAATCTGCCAGTACTTCATCATCTGCCTGCCCACCATGGGGCCAACGAAGTGTGACCTaGGTCTGTGGCTGGATCTCA +
Preference number: 4 (lower is better)
Translates to: FPACKSASTSSSACPPWGQRSVT*VCGWIS
Trigger: TGAGATCCAGCCACAGACCCAGGTCACACTTCGTTG...GCCCCATGGTGGGCAGGCAGATGATGAAGTACTGGCAGATTTGCAGGCTGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR CCA 90 bp GGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCGGGTGCCCATCAATGTaGCAACGAAGTGTGACCTGG +
Preference number: 4 (lower is better)
Translates to: GGQGSCPSCCELPSRDVLGCPSM*QRSVTW
Trigger: CCAGGTCACACTTCGTTGCCACATTGATGGGCACCC...GAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CCA 90 bp GAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCGGGTGCCCATCAATGTaGCAACGAAGTGTGACCTGG +
Preference number: 4 (lower is better)
Translates to: EDRDLAHHAVSFPLEMSSGCPSM*QRSVTW
Trigger: CCAGGTCACACTTCGTTGCCACATTGATGGGCACCC...GGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CCA 90 bp CTTGAGAATATTAAGGAACTCCCCACAAACCCAGCTCATCCCAAGCCTAGCCCTATGCTCAGGACCAGCTaGCCGGAGCGTCAGGTTCCG +
Preference number: 4 (lower is better)
Translates to: LENIKELPTNPAHPKPSPMLRTS*PERQVP
Trigger: CGGAACCTGACGCTCCGGCCAGCTGGTCCTGAGCAT...AGGGCTAGGCTTGGGATGAGCTGGGTTTGTGGGGAGTTCCTTAATATTCTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
CDS-3UTR CCA 90 bp CTGTACCCAGAGGACCATTTTTCTGTGAGGGCTGTCACTATTTCCTCTGGAGCAATGCTCAGGACCAGCTaGCCGGAGCGTCAGGTTCCG +
Preference number: 4 (lower is better)
Translates to: LYPEDHFSVRAVTISSGAMLRTS*PERQVP
Trigger: CGGAACCTGACGCTCCGGCCAGCTGGTCCTGAGCAT...TGCTCCAGAGGAAATAGTGACAGCCCTCACAGAAAAATGGTCCTCTGGGTACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471863.5
CDS-3UTR CCA 90 bp GGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTCCTCTATATGGCCAAAAGCACTGTaGGCGCAGCAGGAATACAGC +
Preference number: 4 (lower is better)
Translates to: GQCAQAQSGEDSLAVSSIWPKAL*AQQEYS
Trigger: GCTGTATTCCTGCTGCGCCCACAGTGCTTTTGGCCA...TATAGAGGACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
CDS-3UTR CCA 90 bp GAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCTGGCCAAAAGCACTGTaGGCGCAGCAGGAATACAGC +
Preference number: 4 (lower is better)
Translates to: EDRDLAHHAVSFPLEMSSWPKAL*AQQEYS
Trigger: GCTGTATTCCTGCTGCGCCCACAGTGCTTTTGGCCA...GGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000481273.5
CDS-3UTR CCA 90 bp ATGCCCACCCACCCCACGCTGCAATTACATATAAAAGCCGCCCGTGGTGCATACCTCAAGGTGAAGTTCTaGCTGCTGCAAGCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: MPTHPTLQLHIKAARGAYLKVKF*LLQAWP
Trigger: TGGCCAGGCTTGCAGCAGCCAGAACTTCACCTTGAG...GTATGCACCACGGGCGGCTTTTATATGTAATTGCAGCGTGGGGTGGGTGGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
CDS-3UTR CCA 90 bp TGTGTCCTCTATAATCCTGGTCTAGACCCCCAAGTGGGACCAGTGGGCCAAGAGCTCAAGGTGAAGTTCTaGCTGCTGCAAGCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: CVLYNPGLDPQVGPVGQELKVKF*LLQAWP
Trigger: TGGCCAGGCTTGCAGCAGCCAGAACTTCACCTTGAG...CTCTTGGCCCACTGGTCCCACTTGGGGGTCTAGACCAGGATTATAGAGGACACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
CDS-3UTR CCA 90 bp CAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCCTCAAGGTGAAGTTCTaGCTGCTGCAAGCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: QEDRDLAHHAVSFPLEMSLKVKF*LLQAWP
Trigger: TGGCCAGGCTTGCAGCAGCCAGAACTTCACCTTGAG...GGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000481273.5
CDS-3UTR CCA 90 bp GGTGGCAGGGAAAACTGCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAACTGGCAATGGAACATaGCCTCCTCATACCTCGCTA +
Preference number: 4 (lower is better)
Translates to: GGRENCPAQSPSRPVWVQTGNGT*PPHTSL
Trigger: TAGCGAGGTATGAGGAGGCCATGTTCCATTGCCAGT...TTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp CCAGAAATTGGGGTTACCTGTGGCACCCACACTGTCCCTGATAGAGGAAGAGGTGGCTGGGCTGAGAACTaGCAATGGAACATGGCCTCC +
Preference number: 4 (lower is better)
Translates to: PEIGVTCGTHTVPDRGRGGWAEN*QWNMAS
Trigger: GGAGGCCATGTTCCATTGCCAGTTCTCAGCCCAGCC...ACCTCTTCCTCTATCAGGGACAGTGTGGGTGCCACAGGTAACCCCAATTTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp CTGTACCCAGAGGACCATTTTTCTGTGAGGGCTGTCACTATTTCCTCTGGAGCAAGGCTCGGGGGTGGCTaGGCTGAGAACTGGCAATGG +
Preference number: 4 (lower is better)
Translates to: LYPEDHFSVRAVTISSGARLGGG*AENWQW
Trigger: CCATTGCCAGTTCTCAGCCCAGCCACCCCCGAGCCT...TGCTCCAGAGGAAATAGTGACAGCCCTCACAGAAAAATGGTCCTCTGGGTACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000471863.5
CDS-3UTR CCA 90 bp GAAGTTGAAGGCCAGAAATTGGGGTTACCTGTGGCACCCACACTGTCCCTGATACGTTGGCAAACACTGTaGCTCTGCGGAGGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: EVEGQKLGLPVAPTLSLIRWQTL*LCGGVG
Trigger: CCCCACACCTCCGCAGAGCCACAGTGTTTGCCAACG...TATCAGGGACAGTGTGGGTGCCACAGGTAACCCCAATTTCTGGCCTTCAACTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp AAAGCCGCCCGTGGTGCATACAAAAAGGGCGGTTTATATAGTGTCAAAAGCTCCTTGCGTGGCCGGACCTaGGTCAGCAGCAGAGACCCG +
Preference number: 4 (lower is better)
Translates to: KAARGAYKKGGLYSVKSSLRGRT*VSSRDP
Trigger: CGGGTCTCTGCTGCTGACCCAGGTCCGGCCACGCAA...GGAGCTTTTGACACTATATAAACCGCCCTTTTTGTATGCACCACGGGCGGCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp GTGTGCCCAGAACTTGAGAATATTAAGGAACTCCCCACAAACCCAGCTCATCCCGATCCCTGCATTGCGTaGCCGGACCTGGGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: VCPELENIKELPTNPAHPDPCIA*PDLGQQ
Trigger: CTGCTGACCCAGGTCCGGCCACGCAATGCAGGGATC...GGGATGAGCTGGGTTTGTGGGGAGTTCCTTAATATTCTCAAGTTCTGGGCACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp CTTGAGAATATTAAGGAACTCCCCACAAACCCAGCTCATCCCAAGCCTAGCCCTGATCCCTGCATTGCGTaGCCGGACCTGGGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: LENIKELPTNPAHPKPSPDPCIA*PDLGQQ
Trigger: CTGCTGACCCAGGTCCGGCCACGCAATGCAGGGATC...AGGGCTAGGCTTGGGATGAGCTGGGTTTGTGGGGAGTTCCTTAATATTCTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp GTGTGCCCAGAACTTGAGAATATTAAGGAACTCCCCACAAACCCAGCTCATCCCGCTCTGGCAGACCCTTaGGGGGAAGGCAGGTCACAC +
Preference number: 4 (lower is better)
Translates to: VCPELENIKELPTNPAHPALADP*GEGRSH
Trigger: GTGTGACCTGCCTTCCCCCCAAGGGTCTGCCAGAGC...GGGATGAGCTGGGTTTGTGGGGAGTTCCTTAATATTCTCAAGTTCTGGGCACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp GGCAGGGAAAACTGCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTCCACTTTCAGCAATATTaGCCAACACCAGCTCGTGGC +
Preference number: 4 (lower is better)
Translates to: GRENCPAQSPSRPVWVQVHFQQY*PTPARG
Trigger: GCCACGAGCTGGTGTTGGCCAATATTGCTGAAAGTG...GACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp AGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCCGACAACTGTAGGTTTTaGTGTGGCCTGGGTCAGGCA +
Preference number: 4 (lower is better)
Translates to: RDLAHHAVSFPLEMSSPADNCRF*CGLGQA
Trigger: TGCCTGACCCAGGCCACACCAAAACCTACAGTTGTC...GGCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR CCA 90 bp GAAGTTGAAGGCCAGAAATTGGGGTTACCTGTGGCACCCACACTGTCCCTGATACTCGATGCTGCCGGCTaGGGTGCTGCTCATACAACG +
Preference number: 4 (lower is better)
Translates to: EVEGQKLGLPVAPTLSLILDAAG*GAAHTT
Trigger: CGTTGTATGAGCAGCACCCCAGCCGGCAGCATCGAG...TATCAGGGACAGTGTGGGTGCCACAGGTAACCCCAATTTCTGGCCTTCAACTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp AGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCCCTGTGGCTGGGGTGGTaGTGTGAACTTGAGCTTTTC +
Preference number: 4 (lower is better)
Translates to: RDLAHHAVSFPLEMSSPALWLGW*CELELF
Trigger: GAAAAGCTCAAGTTCACACCACCACCCCAGCCACAG...GGCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CCA 90 bp CCAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTGCTGTGGCTGGGGTaGTGGTGTGAACTTGAGCTT +
Preference number: 4 (lower is better)
Translates to: PGGQGSCPSCCELPSRDVLLWLG*WCELEL
Trigger: AAGCTCAAGTTCACACCACCACCCCAGCCACAGCAG...GACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CCA 90 bp ATGCCCACCCACCCCACGCTGCAATTACATATAAAAGCCGCCCGTGGTGCATACATGCACTGCTGTGGCTaGGGTGGTGGTGTGAACTTG +
Preference number: 4 (lower is better)
Translates to: MPTHPTLQLHIKAARGAYMHCCG*GGGVNL
Trigger: CAAGTTCACACCACCACCCCAGCCACAGCAGTGCAT...GTATGCACCACGGGCGGCTTTTATATGTAATTGCAGCGTGGGGTGGGTGGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp CAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCATGCACTGCTGTGGCTaGGGTGGTGGTGTGAACTTG +
Preference number: 4 (lower is better)
Translates to: QEDRDLAHHAVSFPLEMSMHCCG*GGGVNL
Trigger: CAAGTTCACACCACCACCCCAGCCACAGCAGTGCAT...GGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CCA 90 bp CCAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCATGCACTGCTGTGGCTaGGGTGGTGGTGTGAACTTG +
Preference number: 4 (lower is better)
Translates to: PGGQGSCPSCCELPSRDVMHCCG*GGGVNL
Trigger: CAAGTTCACACCACCACCCCAGCCACAGCAGTGCAT...GACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CCA 90 bp GAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCTGAACAGGGCACCGTaGCCTCCTTGTCAAACTCCA +
Preference number: 4 (lower is better)
Translates to: EDRDLAHHAVSFPLEMSSLNRAP*PPCQTP
Trigger: TGGAGTTTGACAAGGAGGCCACGGTGCCCTGTTCAG...GGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CCA 90 bp GGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTCCTCTATACTGAACAGGGCACCGTaGCCTCCTTGTCAAACTCCA +
Preference number: 4 (lower is better)
Translates to: GQCAQAQSGEDSLAVSSILNRAP*PPCQTP
Trigger: TGGAGTTTGACAAGGAGGCCACGGTGCCCTGTTCAG...TATAGAGGACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp CAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCCTGAACAGGGCACCGTaGCCTCCTTGTCAAACTCCA +
Preference number: 4 (lower is better)
Translates to: QEDRDLAHHAVSFPLEMSLNRAP*PPCQTP
Trigger: TGGAGTTTGACAAGGAGGCCACGGTGCCCTGTTCAG...GGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CCA 90 bp GGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTCCTCTATAACTGCCACAGTGAGCTaGACATGGGCACGAATCTGG +
Preference number: 4 (lower is better)
Translates to: GQCAQAQSGEDSLAVSSITATVS*TWARIW
Trigger: CCAGATTCGTGCCCATGTCCAGCTCACTGTGGCAGT...TATAGAGGACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp GGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCACTGCCACAGTGAGCTaGACATGGGCACGAATCTGG +
Preference number: 4 (lower is better)
Translates to: GGQGSCPSCCELPSRDVLTATVS*TWARIW
Trigger: CCAGATTCGTGCCCATGTCCAGCTCACTGTGGCAGT...GAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CCA 90 bp CCAGAAATTGGGGTTACCTGTGGCACCCACACTGTCCCTGATAGAGGAAGAGGTAGGGCTGTGTGGCCCTaGTACACAGTCGTACGCTCT +
Preference number: 4 (lower is better)
Translates to: PEIGVTCGTHTVPDRGRGRAVWP*YTVVRS
Trigger: AGAGCGTACGACTGTGTACCAGGGCCACACAGCCCT...ACCTCTTCCTCTATCAGGGACAGTGTGGGTGCCACAGGTAACCCCAATTTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp ATGCCCACCCACCCCACGCTGCAATTACATATAAAAGCCGCCCGTGGTGCATACTGCAGTAGGGCTGTGTaGCCCTGGTACACAGTCGTA +
Preference number: 4 (lower is better)
Translates to: MPTHPTLQLHIKAARGAYCSRAV*PWYTVV
Trigger: TACGACTGTGTACCAGGGCCACACAGCCCTACTGCA...GTATGCACCACGGGCGGCTTTTATATGTAATTGCAGCGTGGGGTGGGTGGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp GATGTAGGCCACAGCGGCACCCACCGACAACCCAATGGTCTGGATCATCTTGTATGCAGTAGGGCTGTGTaGCCCTGGTACACAGTCGTA +
Preference number: 4 (lower is better)
Translates to: DVGHSGTHRQPNGLDHLVCSRAV*PWYTVV
Trigger: TACGACTGTGTACCAGGGCCACACAGCCCTACTGCA...TACAAGATGATCCAGACCATTGGGTTGTCGGTGGGTGCCGCTGTGGCCTACATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR CCA 90 bp GGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCTGCAGTAGGGCTGTGTaGCCCTGGTACACAGTCGTA +
Preference number: 4 (lower is better)
Translates to: GGQGSCPSCCELPSRDVLCSRAV*PWYTVV
Trigger: TACGACTGTGTACCAGGGCCACACAGCCCTACTGCA...GAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CCA 90 bp GAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTCCACCGACAACCCAATaGTCTGGATCATCTTGTAGG +
Preference number: 4 (lower is better)
Translates to: EDVGLGQCAQAQSGEDSLPPTTQ*SGSSCR
Trigger: CCTACAAGATGATCCAGACCATTGGGTTGTCGGTGG...AAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp CCAGAAATTGGGGTTACCTGTGGCACCCACACTGTCCCTGATAGAGGAAGAGGTGGCCGGAGCCCAAGCTaGTCAAGGCCACTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: PEIGVTCGTHTVPDRGRGGRSPS*SRPLLL
Trigger: AAGAAGAAGTGGCCTTGACCAGCTTGGGCTCCGGCC...ACCTCTTCCTCTATCAGGGACAGTGTGGGTGCCACAGGTAACCCCAATTTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp CAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCTTATCACTTGTGCTGTaGCGTTTGTTGGTGGCCGCG +
Preference number: 4 (lower is better)
Translates to: QGSCPSCCELPSRDVLPCLSLVL*RLLVAA
Trigger: CGCGGCCACCAACAAACGCCACAGCACAAGTGATAA...GCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CCA 90 bp GAAGTTGAAGGCCAGAAATTGGGGTTACCTGTGGCACCCACACTGTCCCTGATAATGCCCAGGGCTACCTaGGTGCATAGGGCCACCTTC +
Preference number: 4 (lower is better)
Translates to: EVEGQKLGLPVAPTLSLIMPRAT*VHRATF
Trigger: GAAGGTGGCCCTATGCACCCAGGTAGCCCTGGGCAT...TATCAGGGACAGTGTGGGTGCCACAGGTAACCCCAATTTCTGGCCTTCAACTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp TGCCAGTACTTCATCATCTGCCTGCCCACCATGGGGCATCTCTCCATGTGTAAAATGCCCAGGGCTACCTaGGTGCATAGGGCCACCTTC +
Preference number: 4 (lower is better)
Translates to: CQYFIICLPTMGHLSMCKMPRAT*VHRATF
Trigger: GAAGGTGGCCCTATGCACCCAGGTAGCCCTGGGCAT...TTTACACATGGAGAGATGCCCCATGGTGGGCAGGCAGATGATGAAGTACTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
CDS-3UTR CCA 90 bp CAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCGCACAAAGCGGTTGTTaGACAGGTGCTCCATGCCCA +
Preference number: 4 (lower is better)
Translates to: QEDRDLAHHAVSFPLEMSAQSGC*TGAPCP
Trigger: TGGGCATGGAGCACCTGTCCAACAACCGCTTTGTGC...GGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR CCA 90 bp CTTGAGAATATTAAGGAACTCCCCACAAACCCAGCTCATCCCAAGCCTAGCCCTAGTCACCCTCCAGGATaGCCTCGGGGGACATCCAGC +
Preference number: 4 (lower is better)
Translates to: LENIKELPTNPAHPKPSPSHPPG*PRGTSS
Trigger: GCTGGATGTCCCCCGAGGCCATCCTGGAGGGTGACT...AGGGCTAGGCTTGGGATGAGCTGGGTTTGTGGGGAGTTCCTTAATATTCTCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp ATGCCCACCCACCCCACGCTGCAATTACATATAAAAGCCGCCCGTGGTGCATACTCTGCCTGCCCACCATaGGGCATCTCTCCATGTGTA +
Preference number: 4 (lower is better)
Translates to: MPTHPTLQLHIKAARGAYSACPP*GISPCV
Trigger: TACACATGGAGAGATGCCCCATGGTGGGCAGGCAGA...GTATGCACCACGGGCGGCTTTTATATGTAATTGCAGCGTGGGGTGGGTGGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp TGTGTCCTCTATAATCCTGGTCTAGACCCCCAAGTGGGACCAGTGGGCCAAGAGTCTGCCTGCCCACCATaGGGCATCTCTCCATGTGTA +
Preference number: 4 (lower is better)
Translates to: CVLYNPGLDPQVGPVGQESACPP*GISPCV
Trigger: TACACATGGAGAGATGCCCCATGGTGGGCAGGCAGA...CTCTTGGCCCACTGGTCCCACTTGGGGGTCTAGACCAGGATTATAGAGGACACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp GAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCTCTGCCTGCCCACCATaGGGCATCTCTCCATGTGTA +
Preference number: 4 (lower is better)
Translates to: EDRDLAHHAVSFPLEMSSSACPP*GISPCV
Trigger: TACACATGGAGAGATGCCCCATGGTGGGCAGGCAGA...GGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR CCA 90 bp TTGTCTCTGGGCACTGACCAGGCAGTTACGCGCAGCCAAGTCCTTATGCACAAATCAGCCGATAGAGTTTaGAAGGGCAGCCCTCGGGCT +
Preference number: 4 (lower is better)
Translates to: LSLGTDQAVTRSQVLMHKSADRV*KGSPRA
Trigger: AGCCCGAGGGCTGCCCTTCCAAACTCTATCGGCTGA...TTTGTGCATAAGGACTTGGCTGCGCGTAACTGCCTGGTCAGTGCCCAGAGACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
CDS-3UTR CCA 90 bp GGCAGGGAAAACTGCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTCTTGAAGGCCAGAAATTaGGGTTACCTGTGGCACCCA +
Preference number: 4 (lower is better)
Translates to: GRENCPAQSPSRPVWVQVLKARN*GYLWHP
Trigger: TGGGTGCCACAGGTAACCCCAATTTCTGGCCTTCAA...GACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp CAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTCAGCCTCCCAAAGGATGAAGTTGGCAGATGAGTaGCAGAGTTGGACCCGGTCA +
Preference number: 4 (lower is better)
Translates to: QLKALVAQFGSKSASQRMKLADE*QSWTRS
Trigger: TGACCGGGTCCAACTCTGCCACTCATCTGCCAACTT...CATCCTTTGGGAGGCTGACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp TCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTCCTCTATAATGGGAAGACGTGGGTCTaGGTCAGTGTGCACAAGCCC +
Preference number: 4 (lower is better)
Translates to: SVCTSPEWGGLTCCVLYNGKTWV*VSVHKP
Trigger: GGGCTTGTGCACACTGACCCAGACCCACGTCTTCCC...ATTATAGAGGACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp TCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTCCTCTATAATAGGGTGGGGAAGACGTaGGTCTGGGTCAGTGTGCAC +
Preference number: 4 (lower is better)
Translates to: SVCTSPEWGGLTCCVLYNRVGKT*VWVSVH
Trigger: GTGCACACTGACCCAGACCCACGTCTTCCCCACCCT...ATTATAGAGGACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp GAAGTTGAAGGCCAGAAATTGGGGTTACCTGTGGCACCCACACTGTCCCTGATAAGGGTGGGGAAGACGTaGGTCTGGGTCAGTGTGCAC +
Preference number: 4 (lower is better)
Translates to: EVEGQKLGLPVAPTLSLIRVGKT*VWVSVH
Trigger: GTGCACACTGACCCAGACCCACGTCTTCCCCACCCT...TATCAGGGACAGTGTGGGTGCCACAGGTAACCCCAATTTCTGGCCTTCAACTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp GAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCGCACCACGTTGGCGTaGTTCAGCTTCCCAAACATC +
Preference number: 4 (lower is better)
Translates to: EDRDLAHHAVSFPLEMSSRTTLA*FSFPNI
Trigger: GATGTTTGGGAAGCTGAACCACGCCAACGTGGTGCG...GGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR CCA 90 bp CAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCCGCACCACGTTGGCGTaGTTCAGCTTCCCAAACATC +
Preference number: 4 (lower is better)
Translates to: QEDRDLAHHAVSFPLEMSRTTLA*FSFPNI
Trigger: GATGTTTGGGAAGCTGAACCACGCCAACGTGGTGCG...GGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR CCA 90 bp GTGTGCCCAGAACTTGAGAATATTAAGGAACTCCCCACAAACCCAGCTCATCCCCTCCCATCCAGCACTTaGACACGGGCTTGCGCCTCG +
Preference number: 4 (lower is better)
Translates to: VCPELENIKELPTNPAHPLPSST*TRACAS
Trigger: CGAGGCGCAAGCCCGTGTCCAAGTGCTGGATGGGAG...GGGATGAGCTGGGTTTGTGGGGAGTTCCTTAATATTCTCAAGTTCTGGGCACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000345201.6
3UTR CAA 72 bp TGGACCCGGTCAAGGGGAGAAGTTGAAGGCCAGAAATaGGGGTTACCTGTGGCACCCACACTGTCCCTGATA +
Preference number: 4 (lower is better)
Translates to: WTRSRGEVEGQK*GLPVAPTLSLI
Trigger: TATCAGGGACAGTGTGGGTGCCACAGGTAACCCCAATTTCTGGCCTTCAACTTCTCCCCTTGACCGGGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR TCA 90 bp TGTGTCCTCTATAATCCTGGTCTAGACCCCCAAGTGGGACCAGTGGGCCAAGAGCAGCAATGCTCAAGGTaGAGTTCTGGCTGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: CVLYNPGLDPQVGPVGQEQQCSR*SSGCCK
Trigger: CTTGCAGCAGCCAGAACTTCACCTTGAGCATTGCTG...CTCTTGGCCCACTGGTCCCACTTGGGGGTCTAGACCAGGATTATAGAGGACACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
CDS-3UTR TCA 90 bp GGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCAGCAATGCTCAAGGTaGAGTTCTGGCTGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: GGQGSCPSCCELPSRDVLQQCSR*SSGCCK
Trigger: CTTGCAGCAGCCAGAACTTCACCTTGAGCATTGCTG...GAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000481273.5
CDS-3UTR TCA 90 bp ACCAGTGGGCCAAGAGACTCATTAACCCTGTGTGCCCAGAACTTGAGAATATTAGTGTGGCTTCCAGGATaGTGGGTGGGCCCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: TSGPRDSLTLCAQNLRILVWLPG*WVGPSA
Trigger: GGCAGAGGGGCCCACCCATCATCCTGGAAGCCACAC...TAATATTCTCAAGTTCTGGGCACACAGGGTTAATGAGTCTCTTGGCCCACTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR TCA 90 bp CAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCGTGAGTCCTCTGAGATaGGCATCTGGTTTCTGTACC +
Preference number: 4 (lower is better)
Translates to: QGSCPSCCELPSRDVLPCVSPLR*ASGFCT
Trigger: GGTACAGAAACCAGATGCTCATCTCAGAGGACTCAC...GCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR TCA 90 bp GGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCGCAAGGTCCCATTCTTaGAGACCTCGAACCGTGAGT +
Preference number: 4 (lower is better)
Translates to: GGQGSCPSCCELPSRDVLARSHS*RPRTVS
Trigger: ACTCACGGTTCGAGGTCTTCAAGAATGGGACCTTGC...GAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR TCA 90 bp GAAGTTGAAGGCCAGAAATTGGGGTTACCTGTGGCACCCACACTGTCCCTGATATCCTTGCCTTTCCACTaGATCAGCGGCTTGGGGTCC +
Preference number: 4 (lower is better)
Translates to: EVEGQKLGLPVAPTLSLISLPFH*ISGLGS
Trigger: GGACCCCAAGCCGCTGATTCAGTGGAAAGGCAAGGA...TATCAGGGACAGTGTGGGTGCCACAGGTAACCCCAATTTCTGGCCTTCAACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000470019.5
CDS-3UTR TCA 90 bp TCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTCCTCTATAATTCCTTGCCTTTCCACTaGATCAGCGGCTTGGGGTCC +
Preference number: 4 (lower is better)
Translates to: SVCTSPEWGGLTCCVLYNSLPFH*ISGLGS
Trigger: GGACCCCAAGCCGCTGATTCAGTGGAAAGGCAAGGA...ATTATAGAGGACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000470019.5
CDS-3UTR TCA 90 bp TGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTGGTGCTGAGGGGCTGTaGCTTCAATTTTTCATCCTT +
Preference number: 4 (lower is better)
Translates to: WVWVSVHKPRVGRTHLLCGAEGL*LQFFIL
Trigger: AAGGATGAAAAATTGAAGTCACAGCCCCTCAGCACC...ACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR TCA 90 bp GGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCTTCTGCTTGGTGCTaGGGGGCTGTGACTTCAATT +
Preference number: 4 (lower is better)
Translates to: GGQGSCPSCCELPSRDVLPSAWC*GAVTSI
Trigger: AATTGAAGTCACAGCCCCTCAGCACCAAGCAGAAGG...GAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR TCA 90 bp GAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTTCTGCTTGGTGCTaGGGGGCTGTGACTTCAATT +
Preference number: 4 (lower is better)
Translates to: EDRDLAHHAVSFPLEMSSPSAWC*GAVTSI
Trigger: AATTGAAGTCACAGCCCCTCAGCACCAAGCAGAAGG...GGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR TCA 90 bp GCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTCAGCCTCCCAAAGGAGTGTCAAAAGCTCCTaGAAACTCCTTCATCTGCCA +
Preference number: 4 (lower is better)
Translates to: AQLKALVAQFGSKSASQRSVKSS*KLLHLP
Trigger: TGGCAGATGAAGGAGTTTTCAGGAGCTTTTGACACT...CCTTTGGGAGGCTGACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR TCA 90 bp TGTGTCCTCTATAATCCTGGTCTAGACCCCCAAGTGGGACCAGTGGGCCAAGAGTCCTCAGGAACTGCTTaGGGTCTCCCAGATCCACAT +
Preference number: 4 (lower is better)
Translates to: CVLYNPGLDPQVGPVGQESSGTA*GLPDPH
Trigger: ATGTGGATCTGGGAGACCTCAAGCAGTTCCTGAGGA...CTCTTGGCCCACTGGTCCCACTTGGGGGTCTAGACCAGGATTATAGAGGACACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp AAAGCCGCCCGTGGTGCATACAAAAAGGGCGGTTTATATAGTGTCAAAAGCTCCCAGCCGGTCCACAGCTaGAAAGCTCAGGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: KAARGAYKKGGLYSVKSSQPVHS*KAQAAA
Trigger: GGCAGCAGCCTGAGCTTTGCAGCTGTGGACCGGCTG...GGAGCTTTTGACACTATATAAACCGCCCTTTTTGTATGCACCACGGGCGGCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp CTTGAGAATATTAAGGAACTCCCCACAAACCCAGCTCATCCCAAGCCTAGCCCTCCACACACTGGAAGGTaGCAGAGTCCTGCAGCCGGT +
Preference number: 4 (lower is better)
Translates to: LENIKELPTNPAHPKPSPPHTGR*QSPAAG
Trigger: ACCGGCTGCAGGACTCTGGCACCTTCCAGTGTGTGG...AGGGCTAGGCTTGGGATGAGCTGGGTTTGTGGGGAGTTCCTTAATATTCTCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp TGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTCAGGACCACAGGACCTaGCTCAATCCATTTGATGTT +
Preference number: 4 (lower is better)
Translates to: WVWVSVHKPRVGRTHLLCQDHRT*LNPFDV
Trigger: AACATCAAATGGATTGAGGCAGGTCCTGTGGTCCTG...ACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp GAAGTTGAAGGCCAGAAATTGGGGTTACCTGTGGCACCCACACTGTCCCTGATAGCTTCCGAGGCTGGATaGTTCAGGACCACAGGACCT +
Preference number: 4 (lower is better)
Translates to: EVEGQKLGLPVAPTLSLIASEAG*FRTTGP
Trigger: AGGTCCTGTGGTCCTGAAGCATCCAGCCTCGGAAGC...TATCAGGGACAGTGTGGGTGCCACAGGTAACCCCAATTTCTGGCCTTCAACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp CTGCAGGCTAGACCGTGGGAAGTGCATCTTATCACTTGTGCTGTGGCGTTTGTTGCTTCCGAGGCTGGATaGTTCAGGACCACAGGACCT +
Preference number: 4 (lower is better)
Translates to: LQARPWEVHLITCAVAFVASEAG*FRTTGP
Trigger: AGGTCCTGTGGTCCTGAAGCATCCAGCCTCGGAAGC...AACAAACGCCACAGCACAAGTGATAAGATGCACTTCCCACGGTCTAGCCTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR GCA 90 bp AAAGCCGCCCGTGGTGCATACAAAAAGGGCGGTTTATATAGTGTCAAAAGCTCCTCCTCAAAGAGCCACTaGAGGCTCGGGGGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: KAARGAYKKGGLYSVKSSSSKSH*RLGGGW
Trigger: CCAGCCACCCCCGAGCCTGCAGTGGCTCTTTGAGGA...GGAGCTTTTGACACTATATAAACCGCCCTTTTTGTATGCACCACGGGCGGCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp GAAGTTGAAGGCCAGAAATTGGGGTTACCTGTGGCACCCACACTGTCCCTGATATCTGCCCCTGGCCAATaGAGCGGTAGATCCCTGCAT +
Preference number: 4 (lower is better)
Translates to: EVEGQKLGLPVAPTLSLISAPGQ*SGRSLH
Trigger: ATGCAGGGATCTACCGCTGCATTGGCCAGGGGCAGA...TATCAGGGACAGTGTGGGTGCCACAGGTAACCCCAATTTCTGGCCTTCAACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp CAGATGAGTGGCAGAGTTGGACCCGGTCAAGGGGAGAAGTTGAAGGCCAGAAATTCAAACTCCATGCACTaGTGTGGCTGGGGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: QMSGRVGPGQGEKLKARNSNSMH*CGWGGG
Trigger: ACCACCACCCCAGCCACAGCAGTGCATGGAGTTTGA...ATTTCTGGCCTTCAACTTCTCCCCTTGACCGGGTCCAACTCTGCCACTCATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp CAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCGAGGCTGCTCCCATCTaGCCGTTCCCACTTAATAGT +
Preference number: 4 (lower is better)
Translates to: QEDRDLAHHAVSFPLEMSEAAPI*PFPLNS
Trigger: ACTATTAAGTGGGAACGGGCAGATGGGAGCAGCCTC...GGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR GCA 90 bp TCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTCCTCTATAATGTCACCCGGGCAAAATaGAGGGTCCCAGCGTTGTCT +
Preference number: 4 (lower is better)
Translates to: SVCTSPEWGGLTCCVLYNVTRAK*RVPALS
Trigger: AGACAACGCTGGGACCCTGCATTTTGCCCGGGTGAC...ATTATAGAGGACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp CTCTGGGCACTGACCAGGCAGTTACGCGCAGCCAAGTCCTTATGCACAAAGCGGCAATGCAAGTGTAGTTaGCAGCGTCATCTCGAGTCA +
Preference number: 4 (lower is better)
Translates to: LWALTRQLRAAKSLCTKRQCKCS*QRHLES
Trigger: TGACTCGAGATGACGCTGGCAACTACACTTGCATTG...CCGCTTTGTGCATAAGGACTTGGCTGCGCGTAACTGCCTGGTCAGTGCCCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR GCA 90 bp TCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTCCTCTATAATTGGTGGGGTCCAGGATaGGGTCCTTGCCTTTCCACT +
Preference number: 4 (lower is better)
Translates to: SVCTSPEWGGLTCCVLYNWWGPG*GPCLST
Trigger: AGTGGAAAGGCAAGGACCGCATCCTGGACCCCACCA...ATTATAGAGGACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000470019.5
CDS-3UTR GCA 90 bp CAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCCCATTCTGGAAGATGTaGATCCTGGGTCCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: QEDRDLAHHAVSFPLEMSPFWKM*ILGPSL
Trigger: CAAGCTGGGACCCAGGATGCACATCTTCCAGAATGG...GGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR GCA 90 bp GAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCATTCTGGAAGATGTaGATCCTGGGTCCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: EDRDLAHHAVSFPLEMSSPFWKM*ILGPSL
Trigger: CAAGCTGGGACCCAGGATGCACATCTTCCAGAATGG...GGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR GCA 90 bp TGCCAGTACTTCATCATCTGCCTGCCCACCATGGGGCATCTCTCCATGTGTAAAGTTGCAGCTGTTGCCTaGAATGCAGGTGTAGCGGCC +
Preference number: 4 (lower is better)
Translates to: CQYFIICLPTMGHLSMCKVAAVA*NAGVAA
Trigger: GGCCGCTACACCTGCATTGCAGGCAACAGCTGCAAC...TTTACACATGGAGAGATGCCCCATGGTGGGCAGGCAGATGATGAAGTACTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR GCA 90 bp TCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTCCTCTATAATGTTGCAGCTGTTGCCTaGAATGCAGGTGTAGCGGCC +
Preference number: 4 (lower is better)
Translates to: SVCTSPEWGGLTCCVLYNVAAVA*NAGVAA
Trigger: GGCCGCTACACCTGCATTGCAGGCAACAGCTGCAAC...ATTATAGAGGACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000470019.5
CDS-3UTR GCA 90 bp AAAGCCGCCCGTGGTGCATACAAAAAGGGCGGTTTATATAGTGTCAAAAGCTCCCCCTCGGGCTGCTTCTaGAGCCGCTTGGCTTTGCAG +
Preference number: 4 (lower is better)
Translates to: KAARGAYKKGGLYSVKSSPSGCF*SRLALQ
Trigger: CTGCAAAGCCAAGCGGCTGCAGAAGCAGCCCGAGGG...GGAGCTTTTGACACTATATAAACCGCCCTTTTTGTATGCACCACGGGCGGCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp TGCCAGTACTTCATCATCTGCCTGCCCACCATGGGGCATCTCTCCATGTGTAAAATCTCTGCTGAGGGCTaGCCGTTCTGCAAAGGCCCA +
Preference number: 4 (lower is better)
Translates to: CQYFIICLPTMGHLSMCKISAEG*PFCKGP
Trigger: TGGGCCTTTGCAGAACGGGCAGCCCTCAGCAGAGAT...TTTACACATGGAGAGATGCCCCATGGTGGGCAGGCAGATGATGAAGTACTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
CDS-3UTR GCA 90 bp GAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCATCTTATCACTTGTaGTGTGGCGTTTGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: EDVGLGQCAQAQSGEDSLASYHL*CGVCWW
Trigger: CCACCAACAAACGCCACAGCACAAGTGATAAGATGC...AAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp GAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTCTAGACCGTGGGAAGTaGATCTTATCACTTGTGCTG +
Preference number: 4 (lower is better)
Translates to: EDVGLGQCAQAQSGEDSLLDRGK*ILSLVL
Trigger: CAGCACAAGTGATAAGATGCACTTCCCACGGTCTAG...AAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp CCCAAGCTGGTCAAGGCCACTTCTTCTTGGATCTCTGCTGAGGGCTGCCCGTTCCTAGACCGTGGGAAGTaGATCTTATCACTTGTGCTG +
Preference number: 4 (lower is better)
Translates to: PKLVKATSSWISAEGCPFLDRGK*ILSLVL
Trigger: CAGCACAAGTGATAAGATGCACTTCCCACGGTCTAG...GAACGGGCAGCCCTCAGCAGAGATCCAAGAAGAAGTGGCCTTGACCAGCTTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
CDS-3UTR GCA 90 bp TCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTCCTCTATAATCATAGGGCCACCTTCTaGTTGGTGCTGAGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: SVCTSPEWGGLTCCVLYNHRATF*LVLRGC
Trigger: ACAGCCCCTCAGCACCAAGCAGAAGGTGGCCCTATG...ATTATAGAGGACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp GCGCAGCCAAGTCCTTATGCACAAAGCGGTTGTTGGACAGGTGCTCCATGCCCAGCAGCCAAGTCCTTATaGACAAAGCGGTTGTTGGAC +
Preference number: 4 (lower is better)
Translates to: AQPSPYAQSGCWTGAPCPAAKSL*TKRLLD
Trigger: GTCCAACAACCGCTTTGTGCATAAGGACTTGGCTGC...TGGGCATGGAGCACCTGTCCAACAACCGCTTTGTGCATAAGGACTTGGCTGCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
CDS-3UTR GCA 90 bp CAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCACTTCATCATCTGCCTaGCCACCATGGGGCATCTCT +
Preference number: 4 (lower is better)
Translates to: QEDRDLAHHAVSFPLEMSTSSSA*PPWGIS
Trigger: AGAGATGCCCCATGGTGGGCAGGCAGATGATGAAGT...GGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR GCA 90 bp ATGCCCACCCACCCCACGCTGCAATTACATATAAAAGCCGCCCGTGGTGCATACACTTCATCATCTGCCTaGCCACCATGGGGCATCTCT +
Preference number: 4 (lower is better)
Translates to: MPTHPTLQLHIKAARGAYTSSSA*PPWGIS
Trigger: AGAGATGCCCCATGGTGGGCAGGCAGATGATGAAGT...GTATGCACCACGGGCGGCTTTTATATGTAATTGCAGCGTGGGGTGGGTGGGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp TGTGTCCTCTATAATCCTGGTCTAGACCCCCAAGTGGGACCAGTGGGCCAAGAGCAGTACTTCATCATCTaGCTGCCCACCATGGGGCAT +
Preference number: 4 (lower is better)
Translates to: CVLYNPGLDPQVGPVGQEQYFII*LPTMGH
Trigger: ATGCCCCATGGTGGGCAGGCAGATGATGAAGTACTG...CTCTTGGCCCACTGGTCCCACTTGGGGGTCTAGACCAGGATTATAGAGGACACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp GGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCAGTACTTCATCATCTaGCTGCCCACCATGGGGCAT +
Preference number: 4 (lower is better)
Translates to: GGQGSCPSCCELPSRDVLQYFII*LPTMGH
Trigger: ATGCCCCATGGTGGGCAGGCAGATGATGAAGTACTG...GAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR GCA 90 bp CAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCCAGTACTTCATCATCTaGCTGCCCACCATGGGGCAT +
Preference number: 4 (lower is better)
Translates to: QEDRDLAHHAVSFPLEMSQYFII*LPTMGH
Trigger: ATGCCCCATGGTGGGCAGGCAGATGATGAAGTACTG...GGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR GCA 90 bp CAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTCAGCCTCCCAAAGGATGCTAGCCTTCCCAGCCTaGAAATCTGCCAGTACTTCA +
Preference number: 4 (lower is better)
Translates to: QLKALVAQFGSKSASQRMLAFPA*KSASTS
Trigger: TGAAGTACTGGCAGATTTGCAGGCTGGGAAGGCTAG...CATCCTTTGGGAGGCTGACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp GTGTGCCCAGAACTTGAGAATATTAAGGAACTCCCCACAAACCCAGCTCATCCCTCCCTCCTCACGGCTTaGTGTCCACGGTGCTGTCTC +
Preference number: 4 (lower is better)
Translates to: VCPELENIKELPTNPAHPSLLTA*CPRCCL
Trigger: GAGACAGCACCGTGGACAGCAAGCCGTGAGGAGGGA...GGGATGAGCTGGGTTTGTGGGGAGTTCCTTAATATTCTCAAGTTCTGGGCACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp GGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTCCTCTATAGGAGGACAGGGATCTTaGCCATCATGCTGTGAGCTT +
Preference number: 4 (lower is better)
Translates to: GQCAQAQSGEDSLAVSSIGGQGS*PSCCEL
Trigger: AAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCC...TATAGAGGACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp GAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCGGAGGACAGGGATCTTaGCCATCATGCTGTGAGCTT +
Preference number: 4 (lower is better)
Translates to: EDRDLAHHAVSFPLEMSSGGQGS*PSCCEL
Trigger: AAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCC...GGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR GCA 90 bp GGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCGGAGGACAGGGATCTTaGCCATCATGCTGTGAGCTT +
Preference number: 4 (lower is better)
Translates to: GGQGSCPSCCELPSRDVLGGQGS*PSCCEL
Trigger: AAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCC...GAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR GCA 90 bp GAAGTTGAAGGCCAGAAATTGGGGTTACCTGTGGCACCCACACTGTCCCTGATACTCAGCAATGCCTGTTaGACTAGGGCAGGGGCCTCA +
Preference number: 4 (lower is better)
Translates to: EVEGQKLGLPVAPTLSLILSNAC*TRAGAS
Trigger: TGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAG...TATCAGGGACAGTGTGGGTGCCACAGGTAACCCCAATTTCTGGCCTTCAACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp GTGTGCCCAGAACTTGAGAATATTAAGGAACTCCCCACAAACCCAGCTCATCCCGGAAAGGCCAGGCCCTaGTCAGACCTCAGCAATGCC +
Preference number: 4 (lower is better)
Translates to: VCPELENIKELPTNPAHPGKARP*SDLSNA
Trigger: GGCATTGCTGAGGTCTGAGCAGGGCCTGGCCTTTCC...GGGATGAGCTGGGTTTGTGGGGAGTTCCTTAATATTCTCAAGTTCTGGGCACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp GGTGGCAGGGAAAACTGCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAATGGGGAGGACTCACTTaGTGTGTCCTCTATAATCCT +
Preference number: 4 (lower is better)
Translates to: GGRENCPAQSPSRPVWVQWGGLT*CVLYNP
Trigger: AGGATTATAGAGGACACAGCAAGTGAGTCCTCCCCA...TTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp GGCAGGGAAAACTGCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTCTGGGGAGGACTCACTTaGTGTGTCCTCTATAATCCT +
Preference number: 4 (lower is better)
Translates to: GRENCPAQSPSRPVWVQVWGGLT*CVLYNP
Trigger: AGGATTATAGAGGACACAGCAAGTGAGTCCTCCCCA...GACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp TGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTGAAAACTCCTTCATCTaGCAGGCACTTAGGATGAGG +
Preference number: 4 (lower is better)
Translates to: WVWVSVHKPRVGRTHLLCENSFI*QALRMR
Trigger: CCTCATCCTAAGTGCCTGGCAGATGAAGGAGTTTTC...ACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp CAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTCAGCCTCCCAAAGGATGTGCTCATCCTTGCTCTaGAGGCTCTTCACAAGTACC +
Preference number: 4 (lower is better)
Translates to: QLKALVAQFGSKSASQRMCSSLL*RLFTST
Trigger: GGTACTTGTGAAGAGCCTGCAGAGCAAGGATGAGCA...CATCCTTTGGGAGGCTGACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp CAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCTGCTCATCCTTGCTCTaGAGGCTCTTCACAAGTACC +
Preference number: 4 (lower is better)
Translates to: QGSCPSCCELPSRDVLPCCSSLL*RLFTST
Trigger: GGTACTTGTGAAGAGCCTGCAGAGCAAGGATGAGCA...GCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR GCA 90 bp GAAGTTGAAGGCCAGAAATTGGGGTTACCTGTGGCACCCACACTGTCCCTGATACTCCGGAAGTCCAGCTaGTGCTGCTCATCCTTGCTC +
Preference number: 4 (lower is better)
Translates to: EVEGQKLGLPVAPTLSLILRKSS*CCSSLL
Trigger: GAGCAAGGATGAGCAGCAGCAGCTGGACTTCCGGAG...TATCAGGGACAGTGTGGGTGCCACAGGTAACCCCAATTTCTGGCCTTCAACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp TTCAGCTTCCCAAACATCTCCAACTCCCTCCGGAAGTCCAGCTGCTGCTGCTCAAGGACTCTAAGACTGTaGAGCAGCATGGTGAGACGG +
Preference number: 4 (lower is better)
Translates to: FSFPNISNSLRKSSCCCSRTLRL*SSMVRR
Trigger: CCGTCTCACCATGCTGCTGCACAGTCTTAGAGTCCT...TGAGCAGCAGCAGCTGGACTTCCGGAGGGAGTTGGAGATGTTTGGGAAGCTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497957.1
CDS-3UTR GCA 90 bp TGGGGCTACAGTTACCAGATACTAAGTGCCTGCCTGGTCCCTGGCAGGTCAAGTTTACCAGATACTAAGTaGCTGCCTGGTCCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: WGYSYQILSACLVPGRSSLPDTK*LPGPWQ
Trigger: CTGCCAGGGACCAGGCAGGCACTTAGTATCTGGTAA...ACTTGACCTGCCAGGGACCAGGCAGGCACTTAGTATCTGGTAACTGTAGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476760.1
CDS-3UTR CCA 90 bp CAGATGAGTGGCAGAGTTGGACCCGGTCAAGGGGAGAAGTTGAAGGCCAGAAATTGTGACCTGGGTCTGTaGCTGGATCTCAGCTTCCGA +
Preference number: 4 (lower is better)
Translates to: QMSGRVGPGQGEKLKARNCDLGL*LDLSFR
Trigger: TCGGAAGCTGAGATCCAGCCACAGACCCAGGTCACA...ATTTCTGGCCTTCAACTTCTCCCCTTGACCGGGTCCAACTCTGCCACTCATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp GGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCAACGAAGTGTGACCTaGGTCTGTGGCTGGATCTCA +
Preference number: 4 (lower is better)
Translates to: GGQGSCPSCCELPSRDVLQRSVT*VCGWIS
Trigger: TGAGATCCAGCCACAGACCCAGGTCACACTTCGTTG...GAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CCA 90 bp CCAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCAACGAAGTGTGACCTaGGTCTGTGGCTGGATCTCA +
Preference number: 4 (lower is better)
Translates to: PGGQGSCPSCCELPSRDVQRSVT*VCGWIS
Trigger: TGAGATCCAGCCACAGACCCAGGTCACACTTCGTTG...GACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CCA 90 bp CCATTTTTCTGTGAGGGCTGTCACTATTTCCTCTGGAGCACCCACCCTAACCCCGGGTGCCCATCAATGTaGCAACGAAGTGTGACCTGG +
Preference number: 4 (lower is better)
Translates to: PFFCEGCHYFLWSTHPNPGCPSM*QRSVTW
Trigger: CCAGGTCACACTTCGTTGCCACATTGATGGGCACCC...GGGGTTAGGGTGGGTGCTCCAGAGGAAATAGTGACAGCCCTCACAGAAAAATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471863.5
CDS-3UTR CCA 90 bp CAGATGAGTGGCAGAGTTGGACCCGGTCAAGGGGAGAAGTTGAAGGCCAGAAATTGGCCAAAAGCACTGTaGGCGCAGCAGGAATACAGC +
Preference number: 4 (lower is better)
Translates to: QMSGRVGPGQGEKLKARNWPKAL*AQQEYS
Trigger: GCTGTATTCCTGCTGCGCCCACAGTGCTTTTGGCCA...ATTTCTGGCCTTCAACTTCTCCCCTTGACCGGGTCCAACTCTGCCACTCATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
CDS-3UTR CCA 90 bp CTTATGCACAAAGCGGTTGTTGGACAGGTGCTCCATGCCCAGGGCTACCTGGGTCACTTTCAGCAATATTaGCCAACACCAGCTCGTGGC +
Preference number: 4 (lower is better)
Translates to: LMHKAVVGQVLHAQGYLGHFQQY*PTPARG
Trigger: GCCACGAGCTGGTGTTGGCCAATATTGCTGAAAGTG...ACCCAGGTAGCCCTGGGCATGGAGCACCTGTCCAACAACCGCTTTGTGCATAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR CCA 90 bp GTCAAGGCCACTTCTTCTTGGATCTCTGCTGAGGGCTGCCCGTTCTGCAAAGGCCACTTTCAGCAATATTaGCCAACACCAGCTCGTGGC +
Preference number: 4 (lower is better)
Translates to: VKATSSWISAEGCPFCKGHFQQY*PTPARG
Trigger: GCCACGAGCTGGTGTTGGCCAATATTGCTGAAAGTG...GCCTTTGCAGAACGGGCAGCCCTCAGCAGAGATCCAAGAAGAAGTGGCCTTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR CCA 90 bp AGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCCCACTTTCAGCAATATTaGCCAACACCAGCTCGTGGC +
Preference number: 4 (lower is better)
Translates to: RDLAHHAVSFPLEMSSPAHFQQY*PTPARG
Trigger: GCCACGAGCTGGTGTTGGCCAATATTGCTGAAAGTG...GGCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR CCA 90 bp ATGCCCACCCACCCCACGCTGCAATTACATATAAAAGCCGCCCGTGGTGCATACGACAACTGTAGGTTTTaGTGTGGCCTGGGTCAGGCA +
Preference number: 4 (lower is better)
Translates to: MPTHPTLQLHIKAARGAYDNCRF*CGLGQA
Trigger: TGCCTGACCCAGGCCACACCAAAACCTACAGTTGTC...GTATGCACCACGGGCGGCTTTTATATGTAATTGCAGCGTGGGGTGGGTGGGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp CCAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCGACAACTGTAGGTTTTaGTGTGGCCTGGGTCAGGCA +
Preference number: 4 (lower is better)
Translates to: PGGQGSCPSCCELPSRDVDNCRF*CGLGQA
Trigger: TGCCTGACCCAGGCCACACCAAAACCTACAGTTGTC...GACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR CCA 90 bp CAAAGGCCCACCGTTGAGGCATTCCATCTCTGGCTCCTCGCCCTCGGGCTGCTTTCTGAGATGAGCATCTaGTTTCTGTACCAGACAACT +
Preference number: 4 (lower is better)
Translates to: QRPTVEAFHLWLLALGLLSEMSI*FLYQTT
Trigger: AGTTGTCTGGTACAGAAACCAGATGCTCATCTCAGA...AAGCAGCCCGAGGGCGAGGAGCCAGAGATGGAATGCCTCAACGGTGGGCCTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR CCA 90 bp TGTGTCCTCTATAATCCTGGTCTAGACCCCCAAGTGGGACCAGTGGGCCAAGAGCTGTGGCTGGGGTGGTaGTGTGAACTTGAGCTTTTC +
Preference number: 4 (lower is better)
Translates to: CVLYNPGLDPQVGPVGQELWLGW*CELELF
Trigger: GAAAAGCTCAAGTTCACACCACCACCCCAGCCACAG...CTCTTGGCCCACTGGTCCCACTTGGGGGTCTAGACCAGGATTATAGAGGACACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp TGCCAGTACTTCATCATCTGCCTGCCCACCATGGGGCATCTCTCCATGTGTAAAGGCCGGAGCCCAAGCTaGTCAAGGCCACTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: CQYFIICLPTMGHLSMCKGRSPS*SRPLLL
Trigger: AAGAAGAAGTGGCCTTGACCAGCTTGGGCTCCGGCC...TTTACACATGGAGAGATGCCCCATGGTGGGCAGGCAGATGATGAAGTACTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
CDS-3UTR CCA 90 bp AGGCTAGACCGTGGGAAGTGCATCTTATCACTTGTGCTGTGGCGTTTGTTGGTGGGCCGGAGCCCAAGCTaGTCAAGGCCACTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: RLDRGKCILSLVLWRLLVGRSPS*SRPLLL
Trigger: AAGAAGAAGTGGCCTTGACCAGCTTGGGCTCCGGCC...CACCAACAAACGCCACAGCACAAGTGATAAGATGCACTTCCCACGGTCTAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
CDS-3UTR CCA 90 bp CAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTTATCACTTGTGCTGTaGCGTTTGTTGGTGGCCGCG +
Preference number: 4 (lower is better)
Translates to: QEDRDLAHHAVSFPLEMSLSLVL*RLLVAA
Trigger: CGCGGCCACCAACAAACGCCACAGCACAAGTGATAA...GGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CCA 90 bp GGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCTTATCACTTGTGCTGTaGCGTTTGTTGGTGGCCGCG +
Preference number: 4 (lower is better)
Translates to: GGQGSCPSCCELPSRDVLLSLVL*RLLVAA
Trigger: CGCGGCCACCAACAAACGCCACAGCACAAGTGATAA...GAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CCA 90 bp GGCAGTTACGCGCAGCCAAGTCCTTATGCACAAAGCGGTTGTTGGACAGGTGCTTTATCACTTGTGCTGTaGCGTTTGTTGGTGGCCGCG +
Preference number: 4 (lower is better)
Translates to: GSYAQPSPYAQSGCWTGALSLVL*RLLVAA
Trigger: CGCGGCCACCAACAAACGCCACAGCACAAGTGATAA...AGCACCTGTCCAACAACCGCTTTGTGCATAAGGACTTGGCTGCGCGTAACTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
CDS-3UTR CCA 90 bp ACCGAAGGCCCAGACATCAGACTTGGTAGAGAAGTCACCCTCCAGGATGGCCTCCTGCAGGCTAGACCGTaGGAAGTGCATCTTATCACT +
Preference number: 4 (lower is better)
Translates to: TEGPDIRLGREVTLQDGLLQARP*EVHLIT
Trigger: AGTGATAAGATGCACTTCCCACGGTCTAGCCTGCAG...GAGGCCATCCTGGAGGGTGACTTCTCTACCAAGTCTGATGTCTGGGCCTTCGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
CDS-3UTR CCA 90 bp AGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCCCTGCAGGCTAGACCGTaGGAAGTGCATCTTATCACT +
Preference number: 4 (lower is better)
Translates to: RDLAHHAVSFPLEMSSPALQARP*EVHLIT
Trigger: AGTGATAAGATGCACTTCCCACGGTCTAGCCTGCAG...GGCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CCA 90 bp GTGGGGAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTTTTCATCCTTGCTCTTaGAAATCCTCAGGAACTGCT +
Preference number: 4 (lower is better)
Translates to: VGKTWVWVSVHKPRVGRTFHPCS*KSSGTA
Trigger: AGCAGTTCCTGAGGATTTCCAAGAGCAAGGATGAAA...AGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTCCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp AGGCCAGAAATTGGGGTTACCTGTGGCACCCACACTGTCCCTGATAGAGGAAGAGCACAAAGCGGTTGTTaGACAGGTGCTCCATGCCCA +
Preference number: 4 (lower is better)
Translates to: RPEIGVTCGTHTVPDRGRAQSGC*TGAPCP
Trigger: TGGGCATGGAGCACCTGTCCAACAACCGCTTTGTGC...TCTTCCTCTATCAGGGACAGTGTGGGTGCCACAGGTAACCCCAATTTCTGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp GAAGTTGAAGGCCAGAAATTGGGGTTACCTGTGGCACCCACACTGTCCCTGATATCAGCCGATAGAGTTTaGAAGGGCAGCCCTCGGGCT +
Preference number: 4 (lower is better)
Translates to: EVEGQKLGLPVAPTLSLISADRV*KGSPRA
Trigger: AGCCCGAGGGCTGCCCTTCCAAACTCTATCGGCTGA...TATCAGGGACAGTGTGGGTGCCACAGGTAACCCCAATTTCTGGCCTTCAACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp CAGATGAGTGGCAGAGTTGGACCCGGTCAAGGGGAGAAGTTGAAGGCCAGAAATGATGAGTGGCAGAGTTaGACCCGGTCAAGGGGAGAA +
Preference number: 4 (lower is better)
Translates to: QMSGRVGPGQGEKLKARNDEWQS*TRSRGE
Trigger: TTCTCCCCTTGACCGGGTCCAACTCTGCCACTCATC...ATTTCTGGCCTTCAACTTCTCCCCTTGACCGGGTCCAACTCTGCCACTCATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp CAGATGAGTGGCAGAGTTGGACCCGGTCAAGGGGAGAAGTTGAAGGCCAGAAATTGCACAAGCCCAGAGTaGGGAGGACTCACTTGCTGT +
Preference number: 4 (lower is better)
Translates to: QMSGRVGPGQGEKLKARNCTSPE*GGLTCC
Trigger: ACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCA...ATTTCTGGCCTTCAACTTCTCCCCTTGACCGGGTCCAACTCTGCCACTCATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp CTTGAGAATATTAAGGAACTCCCCACAAACCCAGCTCATCCCAAGCCTAGCCCTGGGAAGACGTGGGTCTaGGTCAGTGTGCACAAGCCC +
Preference number: 4 (lower is better)
Translates to: LENIKELPTNPAHPKPSPGKTWV*VSVHKP
Trigger: GGGCTTGTGCACACTGACCCAGACCCACGTCTTCCC...AGGGCTAGGCTTGGGATGAGCTGGGTTTGTGGGGAGTTCCTTAATATTCTCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp CAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCTATAAAAGCCGCCCGTaGTGCATACAAAAAGGGCGG +
Preference number: 4 (lower is better)
Translates to: QGSCPSCCELPSRDVLPCYKSRP*CIQKGR
Trigger: CCGCCCTTTTTGTATGCACCACGGGCGGCTTTTATA...GCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp CTTGAGAATATTAAGGAACTCCCCACAAACCCAGCTCATCCCAAGCCTAGCCCTGGAGCCGCACCACGTTaGCGTGGTTCAGCTTCCCAA +
Preference number: 4 (lower is better)
Translates to: LENIKELPTNPAHPKPSPGAAPR*RGSASQ
Trigger: TTGGGAAGCTGAACCACGCCAACGTGGTGCGGCTCC...AGGGCTAGGCTTGGGATGAGCTGGGTTTGTGGGGAGTTCCTTAATATTCTCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp CTTGGCCAAGGGCTCGGCCGCCCTTTCCATTTGCACAAGCATGCAGCAGATAAACCTGGCCCGTTTAACTaGAAATGGGAGAAGCTGAGG +
Preference number: 4 (lower is better)
Translates to: LGQGLGRPFHLHKHAADKPGPFN*KWEKLR
Trigger: CCTCAGCTTCTCCCATTTCCAGTTAAACGGGCCAGG...TTTATCTGCTGCATGCTTGTGCAAATGGAAAGGGCGGCCGAGCCCTTGGCCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476760.1
CDS-3UTR CCA 90 bp GCGGGGCCGGAGCCCAAGCTGGTCAAGGCCACTTCTTCTTGGATCTCTGCTGAGGCACAGGCTTGTCGTTaGATGTTAAATAAACGACAG +
Preference number: 4 (lower is better)
Translates to: AGPEPKLVKATSSWISAEAQACR*MLNKRQ
Trigger: CTGTCGTTTATTTAACATCCAACGACAAGCCTGTGC...CTCAGCAGAGATCCAAGAAGAAGTGGCCTTGACCAGCTTGGGCTCCGGCCCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497957.1
3UTR CAA 72 bp TACACCTCCACGCTGTTGATGCGCAAGGTCCCATTCTaGAAGACCTCGAACCGTGAGTCCTCTGAGATGAGC +
Preference number: 4 (lower is better)
Translates to: YTSTLLMRKVPF*KTSNRESSEMS
Trigger: GCTCATCTCAGAGGACTCACGGTTCGAGGTCTTCAAGAATGGGACCTTGCGCATCAACAGCGTGGAGGTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR TCA 90 bp CACTCTGTGCATTGGGAGCATAGTGGGACCCAGGTCTCTAGATTCCTAGTCTATTGTGGCAACGAAGTGTaGCCTGGGTCTGTGGCTGGA +
Preference number: 4 (lower is better)
Translates to: HSVHWEHSGTQVSRFLVYCGNEV*PGSVAG
Trigger: TCCAGCCACAGACCCAGGTCACACTTCGTTGCCACA...ATAGACTAGGAATCTAGAGACCTGGGTCCCACTATGCTCCCAATGCACAGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471863.5
CDS-3UTR TCA 90 bp CACTCTGTGCATTGGGAGCATAGTGGGACCCAGGTCTCTAGATTCCTAGTCTATTCCGCTCCTTGCTGCTaGCTGTGTGGTTGCTCTGAC +
Preference number: 4 (lower is better)
Translates to: HSVHWEHSGTQVSRFLVYSAPCC*LCGCSD
Trigger: GTCAGAGCAACCACACAGTCAGCAGCAAGGAGCGGA...ATAGACTAGGAATCTAGAGACCTGGGTCCCACTATGCTCCCAATGCACAGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471863.5
CDS-3UTR TCA 90 bp TGTGTCCTCTATAATCCTGGTCTAGACCCCCAAGTGGGACCAGTGGGCCAAGAGTCAATCTCTGCTAGGTaGAGTGTGGCTTCCAGGATG +
Preference number: 4 (lower is better)
Translates to: CVLYNPGLDPQVGPVGQESISAR*SVASRM
Trigger: CATCCTGGAAGCCACACTTCACCTAGCAGAGATTGA...CTCTTGGCCCACTGGTCCCACTTGGGGGTCTAGACCAGGATTATAGAGGACACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR TCA 90 bp GGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCTCAATCTCTGCTAGGTaGAGTGTGGCTTCCAGGATG +
Preference number: 4 (lower is better)
Translates to: GGQGSCPSCCELPSRDVLSISAR*SVASRM
Trigger: CATCCTGGAAGCCACACTTCACCTAGCAGAGATTGA...GAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR TCA 90 bp CCAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCTCAATCTCTGCTAGGTaGAGTGTGGCTTCCAGGATG +
Preference number: 4 (lower is better)
Translates to: PGGQGSCPSCCELPSRDVSISAR*SVASRM
Trigger: CATCCTGGAAGCCACACTTCACCTAGCAGAGATTGA...GACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR TCA 90 bp ACCGAAGGCCCAGACATCAGACTTGGTAGAGAAGTCACCCTCCAGGATGGCCTCGGTGCTGAGGGGCTGTaGCTTCAATTTTTCATCCTT +
Preference number: 4 (lower is better)
Translates to: TEGPDIRLGREVTLQDGLGAEGL*LQFFIL
Trigger: AAGGATGAAAAATTGAAGTCACAGCCCCTCAGCACC...GAGGCCATCCTGGAGGGTGACTTCTCTACCAAGTCTGATGTCTGGGCCTTCGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
CDS-3UTR TCA 90 bp ACCAGTGGGCCAAGAGACTCATTAACCCTGTGTGCCCAGAACTTGAGAATATTACGCTGGCAATCTCACTaGAGGAGGGCCGGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: TSGPRDSLTLCAQNLRILRWQSH*RRAGPW
Trigger: CCAAGGACCGGCCCTCCTTCAGTGAGATTGCCAGCG...TAATATTCTCAAGTTCTGGGCACACAGGGTTAATGAGTCTCTTGGCCCACTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR TCA 90 bp GGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTCCTCTATAGTCAAGGGGAGAAGTTaGAGGCCAGAAATTGGGGTT +
Preference number: 4 (lower is better)
Translates to: GQCAQAQSGEDSLAVSSIVKGRS*RPEIGV
Trigger: AACCCCAATTTCTGGCCTTCAACTTCTCCCCTTGAC...TATAGAGGACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR TCA 90 bp TCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTCCTCTATAATGCCAGGCACTTAGGATaGGGAAAGGAGAGAAGGGTG +
Preference number: 4 (lower is better)
Translates to: SVCTSPEWGGLTCCVLYNARHLG*GKERRV
Trigger: CACCCTTCTCTCCTTTCCTCATCCTAAGTGCCTGGC...ATTATAGAGGACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR TCA 90 bp GGCAGGGAAAACTGCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTCAGTGTCAAAAGCTCCTaGAAACTCCTTCATCTGCCA +
Preference number: 4 (lower is better)
Translates to: GRENCPAQSPSRPVWVQVSVKSS*KLLHLP
Trigger: TGGCAGATGAAGGAGTTTTCAGGAGCTTTTGACACT...GACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp ACCAGTGGGCCAAGAGACTCATTAACCCTGTGTGCCCAGAACTTGAGAATATTACAAAGCTCAGGCTGCTaGCCTGGGCGAAACGCCGCT +
Preference number: 4 (lower is better)
Translates to: TSGPRDSLTLCAQNLRILQSSGC*PGRNAA
Trigger: AGCGGCGTTTCGCCCAGGGCAGCAGCCTGAGCTTTG...TAATATTCTCAAGTTCTGGGCACACAGGGTTAATGAGTCTCTTGGCCCACTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp AGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCCCAGGACCACAGGACCTaGCTCAATCCATTTGATGTT +
Preference number: 4 (lower is better)
Translates to: RDLAHHAVSFPLEMSSPAQDHRT*LNPFDV
Trigger: AACATCAAATGGATTGAGGCAGGTCCTGTGGTCCTG...GGCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR GCA 90 bp ACGCGCAGCCAAGTCCTTATGCACAAAGCGGTTGTTGGACAGGTGCTCCATGCCCAGGACCACAGGACCTaGCTCAATCCATTTGATGTT +
Preference number: 4 (lower is better)
Translates to: TRSQVLMHKAVVGQVLHAQDHRT*LNPFDV
Trigger: AACATCAAATGGATTGAGGCAGGTCCTGTGGTCCTG...GGCATGGAGCACCTGTCCAACAACCGCTTTGTGCATAAGGACTTGGCTGCGCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR GCA 90 bp TGGGAGCATAGTGGGACCCAGGTCTCTAGATTCCTAGTCTATTGCTCTTTCCTCGCTTCCGAGGCTGGATaGTTCAGGACCACAGGACCT +
Preference number: 4 (lower is better)
Translates to: WEHSGTQVSRFLVYCSFLASEAG*FRTTGP
Trigger: AGGTCCTGTGGTCCTGAAGCATCCAGCCTCGGAAGC...GAGGAAAGAGCAATAGACTAGGAATCTAGAGACCTGGGTCCCACTATGCTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471863.5
CDS-3UTR GCA 90 bp ACCAGTGGGCCAAGAGACTCATTAACCCTGTGTGCCCAGAACTTGAGAATATTATCCTCAAAGAGCCACTaGAGGCTCGGGGGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: TSGPRDSLTLCAQNLRILSSKSH*RLGGGW
Trigger: CCAGCCACCCCCGAGCCTGCAGTGGCTCTTTGAGGA...TAATATTCTCAAGTTCTGGGCACACAGGGTTAATGAGTCTCTTGGCCCACTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp TGGGAGCATAGTGGGACCCAGGTCTCTAGATTCCTAGTCTATTGCTCTTTCCTCTCTGCCCCTGGCCAATaGAGCGGTAGATCCCTGCAT +
Preference number: 4 (lower is better)
Translates to: WEHSGTQVSRFLVYCSFLSAPGQ*SGRSLH
Trigger: ATGCAGGGATCTACCGCTGCATTGGCCAGGGGCAGA...GAGGAAAGAGCAATAGACTAGGAATCTAGAGACCTGGGTCCCACTATGCTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471863.5
CDS-3UTR GCA 90 bp ACCAGTGGGCCAAGAGACTCATTAACCCTGTGTGCCCAGAACTTGAGAATATTACCTTCTGGTAGACCCTaGCATGGGTGGGCAGCCGGA +
Preference number: 4 (lower is better)
Translates to: TSGPRDSLTLCAQNLRILPSGRP*HGWAAG
Trigger: TCCGGCTGCCCACCCATGGCAGGGTCTACCAGAAGG...TAATATTCTCAAGTTCTGGGCACACAGGGTTAATGAGTCTCTTGGCCCACTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp CCAGAAATTGGGGTTACCTGTGGCACCCACACTGTCCCTGATAGAGGAAGAGGTGAGGCTGCTCCCATCTaGCCGTTCCCACTTAATAGT +
Preference number: 4 (lower is better)
Translates to: PEIGVTCGTHTVPDRGRGEAAPI*PFPLNS
Trigger: ACTATTAAGTGGGAACGGGCAGATGGGAGCAGCCTC...ACCTCTTCCTCTATCAGGGACAGTGTGGGTGCCACAGGTAACCCCAATTTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp AGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCCCAATGCAAGTGTAGTTaGCAGCGTCATCTCGAGTCA +
Preference number: 4 (lower is better)
Translates to: RDLAHHAVSFPLEMSSPAQCKCS*QRHLES
Trigger: TGACTCGAGATGACGCTGGCAACTACACTTGCATTG...GGCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR GCA 90 bp ATCTGCCTGCCCACCATGGGGCATCTCTCCATGTGTAAACACTTCCCACATCAGCCATTCTGGAAGATGTaGATCCTGGGTCCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: ICLPTMGHLSMCKHFPHQPFWKM*ILGPSL
Trigger: CAAGCTGGGACCCAGGATGCACATCTTCCAGAATGG...CTGATGTGGGAAGTGTTTACACATGGAGAGATGCCCCATGGTGGGCAGGCAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR GCA 90 bp GTGTGCCCAGAACTTGAGAATATTAAGGAACTCCCCACAAACCCAGCTCATCCCATCTCTGCTGAGGGCTaGCCGTTCTGCAAAGGCCCA +
Preference number: 4 (lower is better)
Translates to: VCPELENIKELPTNPAHPISAEG*PFCKGP
Trigger: TGGGCCTTTGCAGAACGGGCAGCCCTCAGCAGAGAT...GGGATGAGCTGGGTTTGTGGGGAGTTCCTTAATATTCTCAAGTTCTGGGCACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp CAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCGCATCTTATCACTTGTaGTGTGGCGTTTGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: QGSCPSCCELPSRDVLPCASYHL*CGVCWW
Trigger: CCACCAACAAACGCCACAGCACAAGTGATAAGATGC...GCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000481273.5
CDS-3UTR GCA 90 bp AGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCCGCATCTTATCACTTGTaGTGTGGCGTTTGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: RDLAHHAVSFPLEMSSPAASYHL*CGVCWW
Trigger: CCACCAACAAACGCCACAGCACAAGTGATAAGATGC...GGCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000481273.5
CDS-3UTR GCA 90 bp GCGCTTCTTGCAGTAGAACATGAGGCCCAGCACGGCAATGATGTAGGCCACAGCCTAGACCGTGGGAAGTaGATCTTATCACTTGTGCTG +
Preference number: 4 (lower is better)
Translates to: ALLAVEHEAQHGNDVGHSLDRGK*ILSLVL
Trigger: CAGCACAAGTGATAAGATGCACTTCCCACGGTCTAG...GCTGTGGCCTACATCATTGCCGTGCTGGGCCTCATGTTCTACTGCAAGAAGCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
CDS-3UTR GCA 90 bp TTCCCAGCCTGCAAATCTGCCAGTACTTCATCATCTGCCTGCCCACCATGGGGCCTAGACCGTGGGAAGTaGATCTTATCACTTGTGCTG +
Preference number: 4 (lower is better)
Translates to: FPACKSASTSSSACPPWGLDRGK*ILSLVL
Trigger: CAGCACAAGTGATAAGATGCACTTCCCACGGTCTAG...GCCCCATGGTGGGCAGGCAGATGATGAAGTACTGGCAGATTTGCAGGCTGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
CDS-3UTR GCA 90 bp AGGCCCTGCTCAGACCTCAGCAATGCCTGTTGCACTAGGGCAGGGGCCTCAGGGTCAATTTTTCATCCTTaGTCTTGGAAATCCTCAGGA +
Preference number: 4 (lower is better)
Translates to: RPCSDLSNACCTRAGASGSIFHP*SWKSSG
Trigger: TCCTGAGGATTTCCAAGAGCAAGGATGAAAAATTGA...CCCTGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAGGTCTGAGCAGGGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp CTTGAGAATATTAAGGAACTCCCCACAAACCCAGCTCATCCCAAGCCTAGCCCTCATAGGGCCACCTTCTaGTTGGTGCTGAGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: LENIKELPTNPAHPKPSPHRATF*LVLRGC
Trigger: ACAGCCCCTCAGCACCAAGCAGAAGGTGGCCCTATG...AGGGCTAGGCTTGGGATGAGCTGGGTTTGTGGGGAGTTCCTTAATATTCTCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp GGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCGCAGCCAAGTCCTTATaGACAAAGCGGTTGTTGGAC +
Preference number: 4 (lower is better)
Translates to: GGQGSCPSCCELPSRDVLAAKSL*TKRLLD
Trigger: GTCCAACAACCGCTTTGTGCATAAGGACTTGGCTGC...GAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR GCA 90 bp AGGCCAGAAATTGGGGTTACCTGTGGCACCCACACTGTCCCTGATAGAGGAAGAACTTCATCATCTGCCTaGCCACCATGGGGCATCTCT +
Preference number: 4 (lower is better)
Translates to: RPEIGVTCGTHTVPDRGRTSSSA*PPWGIS
Trigger: AGAGATGCCCCATGGTGGGCAGGCAGATGATGAAGT...TCTTCCTCTATCAGGGACAGTGTGGGTGCCACAGGTAACCCCAATTTCTGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp ATCTGCCTGCCCACCATGGGGCATCTCTCCATGTGTAAACACTTCCCACATCAGACTTCATCATCTGCCTaGCCACCATGGGGCATCTCT +
Preference number: 4 (lower is better)
Translates to: ICLPTMGHLSMCKHFPHQTSSSA*PPWGIS
Trigger: AGAGATGCCCCATGGTGGGCAGGCAGATGATGAAGT...CTGATGTGGGAAGTGTTTACACATGGAGAGATGCCCCATGGTGGGCAGGCAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
CDS-3UTR GCA 90 bp GAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCCAGCCTGCAAATCTaGCAGTACTTCATCATCTGC +
Preference number: 4 (lower is better)
Translates to: EDRDLAHHAVSFPLEMSSPSLQI*QYFIIC
Trigger: GCAGATGATGAAGTACTGGCAGATTTGCAGGCTGGG...GGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR GCA 90 bp GCCTGCAAATCTGCCAGTACTTCATCATCTGCCTGCCCACCATGGGGCATCTCTCTAGCCTTCCCAGCCTaGAAATCTGCCAGTACTTCA +
Preference number: 4 (lower is better)
Translates to: ACKSASTSSSACPPWGISLAFPA*KSASTS
Trigger: TGAAGTACTGGCAGATTTGCAGGCTGGGAAGGCTAG...AGAGATGCCCCATGGTGGGCAGGCAGATGATGAAGTACTGGCAGATTTGCAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
CDS-3UTR GCA 90 bp CAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCCTAGCCTTCCCAGCCTaGAAATCTGCCAGTACTTCA +
Preference number: 4 (lower is better)
Translates to: QEDRDLAHHAVSFPLEMSLAFPA*KSASTS
Trigger: TGAAGTACTGGCAGATTTGCAGGCTGGGAAGGCTAG...GGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR GCA 90 bp CAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCGGATCTTGCCCATCATaGTGTGAGCTTCCCTCTAGA +
Preference number: 4 (lower is better)
Translates to: QEDRDLAHHAVSFPLEMSGSCPS*CELPSR
Trigger: TCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCC...GGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR GCA 90 bp GCCTGCAAATCTGCCAGTACTTCATCATCTGCCTGCCCACCATGGGGCATCTCTGGATCTTGCCCATCATaGTGTGAGCTTCCCTCTAGA +
Preference number: 4 (lower is better)
Translates to: ACKSASTSSSACPPWGISGSCPS*CELPSR
Trigger: TCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCC...AGAGATGCCCCATGGTGGGCAGGCAGATGATGAAGTACTGGCAGATTTGCAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
CDS-3UTR GCA 90 bp GGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCGGATCTTGCCCATCATaGTGTGAGCTTCCCTCTAGA +
Preference number: 4 (lower is better)
Translates to: GGQGSCPSCCELPSRDVLGSCPS*CELPSR
Trigger: TCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCC...GAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR GCA 90 bp AAAGCCGCCCGTGGTGCATACAAAAAGGGCGGTTTATATAGTGTCAAAAGCTCCGGAAAGGCCAGGCCCTaGTCAGACCTCAGCAATGCC +
Preference number: 4 (lower is better)
Translates to: KAARGAYKKGGLYSVKSSGKARP*SDLSNA
Trigger: GGCATTGCTGAGGTCTGAGCAGGGCCTGGCCTTTCC...GGAGCTTTTGACACTATATAAACCGCCCTTTTTGTATGCACCACGGGCGGCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp TCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTCCTCTATAATGGTGGCAGGGAAAACTaGCCAGCTCAAAGCCCTAGT +
Preference number: 4 (lower is better)
Translates to: SVCTSPEWGGLTCCVLYNGGREN*PAQSPS
Trigger: ACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCCACC...ATTATAGAGGACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp CCGTTCTGCAAAGGCCCACCGTTGAGGCATTCCATCTCTGGCTCCTCGCCCTCGCTCATTAACCCTGTGTaGCCAGAACTTGAGAATATT +
Preference number: 4 (lower is better)
Translates to: PFCKGPPLRHSISGSSPSLINPV*PELENI
Trigger: AATATTCTCAAGTTCTGGGCACACAGGGTTAATGAG...CGAGGGCGAGGAGCCAGAGATGGAATGCCTCAACGGTGGGCCTTTGCAGAACGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR GCA 90 bp AGCCAAGTCCTTATGCACAAAGCGGTTGTTGGACAGGTGCTCCATGCCCAGGGCGAAAACTCCTTCATCTaGCAGGCACTTAGGATGAGG +
Preference number: 4 (lower is better)
Translates to: SQVLMHKAVVGQVLHAQGENSFI*QALRMR
Trigger: CCTCATCCTAAGTGCCTGGCAGATGAAGGAGTTTTC...GCCCTGGGCATGGAGCACCTGTCCAACAACCGCTTTGTGCATAAGGACTTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR GCA 90 bp GGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCAAAAGCCGCCCGTGGTaGATACAAAAAGGGCGGTTT +
Preference number: 4 (lower is better)
Translates to: GGQGSCPSCCELPSRDVLKSRPW*IQKGRF
Trigger: AAACCGCCCTTTTTGTATGCACCACGGGCGGCTTTT...GAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp GGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCTGCTCATCCTTGCTCTaGAGGCTCTTCACAAGTACC +
Preference number: 4 (lower is better)
Translates to: GGQGSCPSCCELPSRDVLCSSLL*RLFTST
Trigger: GGTACTTGTGAAGAGCCTGCAGAGCAAGGATGAGCA...GAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR GCA 90 bp CTTGGCTTTGCAGCGCTTCTTGCAGTAGAACATGAGGCCCAGCACGGCAATGATAGGACTCTAAGACTGTaGAGCAGCATGGTGAGACGG +
Preference number: 4 (lower is better)
Translates to: LGFAALLAVEHEAQHGNDRTLRL*SSMVRR
Trigger: CCGTCTCACCATGCTGCTGCACAGTCTTAGAGTCCT...ATCATTGCCGTGCTGGGCCTCATGTTCTACTGCAAGAAGCGCTGCAAAGCCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461100.5
ENST00000494146.5
ENST00000497957.1
CDS-3UTR CCA 90 bp CAGATGAGTGGCAGAGTTGGACCCGGTCAAGGGGAGAAGTTGAAGGCCAGAAATCAACGAAGTGTGACCTaGGTCTGTGGCTGGATCTCA +
Preference number: 4 (lower is better)
Translates to: QMSGRVGPGQGEKLKARNQRSVT*VCGWIS
Trigger: TGAGATCCAGCCACAGACCCAGGTCACACTTCGTTG...ATTTCTGGCCTTCAACTTCTCCCCTTGACCGGGTCCAACTCTGCCACTCATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp ACCTTCACTTGTCTCTGGGCACTGACCAGGCAGTTACGCGCAGCCAAGTCCTTAACTGGCAATGGAACATaGCCTCCTCATACCTCGCTA +
Preference number: 4 (lower is better)
Translates to: TFTCLWALTRQLRAAKSLTGNGT*PPHTSL
Trigger: TAGCGAGGTATGAGGAGGCCATGTTCCATTGCCAGT...TAAGGACTTGGCTGCGCGTAACTGCCTGGTCAGTGCCCAGAGACAAGTGAAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR CCA 90 bp CAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCACTGGCAATGGAACATaGCCTCCTCATACCTCGCTA +
Preference number: 4 (lower is better)
Translates to: QEDRDLAHHAVSFPLEMSTGNGT*PPHTSL
Trigger: TAGCGAGGTATGAGGAGGCCATGTTCCATTGCCAGT...GGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CCA 90 bp GAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCGCTGAGAACTGGCAATaGAACATGGCCTCCTCATAC +
Preference number: 4 (lower is better)
Translates to: EDRDLAHHAVSFPLEMSSAENWQ*NMASSY
Trigger: GTATGAGGAGGCCATGTTCCATTGCCAGTTCTCAGC...GGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CCA 90 bp CAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCGCTGAGAACTGGCAATaGAACATGGCCTCCTCATAC +
Preference number: 4 (lower is better)
Translates to: QEDRDLAHHAVSFPLEMSAENWQ*NMASSY
Trigger: GTATGAGGAGGCCATGTTCCATTGCCAGTTCTCAGC...GGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CCA 90 bp CACTCTGTGCATTGGGAGCATAGTGGGACCCAGGTCTCTAGATTCCTAGTCTATGGCTGGGCTGAGAACTaGCAATGGAACATGGCCTCC +
Preference number: 4 (lower is better)
Translates to: HSVHWEHSGTQVSRFLVYGWAEN*QWNMAS
Trigger: GGAGGCCATGTTCCATTGCCAGTTCTCAGCCCAGCC...ATAGACTAGGAATCTAGAGACCTGGGTCCCACTATGCTCCCAATGCACAGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471863.5
CDS-3UTR CCA 90 bp ACCAGTGGGCCAAGAGACTCATTAACCCTGTGTGCCCAGAACTTGAGAATATTAAGGCTCGGGGGTGGCTaGGCTGAGAACTGGCAATGG +
Preference number: 4 (lower is better)
Translates to: TSGPRDSLTLCAQNLRILRLGGG*AENWQW
Trigger: CCATTGCCAGTTCTCAGCCCAGCCACCCCCGAGCCT...TAATATTCTCAAGTTCTGGGCACACAGGGTTAATGAGTCTCTTGGCCCACTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp CTTGAGAATATTAAGGAACTCCCCACAAACCCAGCTCATCCCAAGCCTAGCCCTGCAGCAGAGACCCGTTaGCAAACACTGTGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: LENIKELPTNPAHPKPSPAAETR*QTLWLC
Trigger: GCAGAGCCACAGTGTTTGCCAACGGGTCTCTGCTGC...AGGGCTAGGCTTGGGATGAGCTGGGTTTGTGGGGAGTTCCTTAATATTCTCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp TGTGTCCTCTATAATCCTGGTCTAGACCCCCAAGTGGGACCAGTGGGCCAAGAGCACTTTCAGCAATATTaGCCAACACCAGCTCGTGGC +
Preference number: 4 (lower is better)
Translates to: CVLYNPGLDPQVGPVGQEHFQQY*PTPARG
Trigger: GCCACGAGCTGGTGTTGGCCAATATTGCTGAAAGTG...CTCTTGGCCCACTGGTCCCACTTGGGGGTCTAGACCAGGATTATAGAGGACACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp CTTGAGAATATTAAGGAACTCCCCACAAACCCAGCTCATCCCAAGCCTAGCCCTTCCAGCTGGCTGTCTTaGGGCTTCTTCAGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: LENIKELPTNPAHPKPSPSSWLS*GFFSQE
Trigger: CTCCTGGCTGAAGAAGCCCCAAGACAGCCAGCTGGA...AGGGCTAGGCTTGGGATGAGCTGGGTTTGTGGGGAGTTCCTTAATATTCTCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp GGAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTCTGAGATGAGCATCTaGTTTCTGTACCAGACAACT +
Preference number: 4 (lower is better)
Translates to: GRRGSGSVCTSPEWGGLTSEMSI*FLYQTT
Trigger: AGTTGTCTGGTACAGAAACCAGATGCTCATCTCAGA...AGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp CAGATGAGTGGCAGAGTTGGACCCGGTCAAGGGGAGAAGTTGAAGGCCAGAAATCTGTGGCTGGGGTGGTaGTGTGAACTTGAGCTTTTC +
Preference number: 4 (lower is better)
Translates to: QMSGRVGPGQGEKLKARNLWLGW*CELELF
Trigger: GAAAAGCTCAAGTTCACACCACCACCCCAGCCACAG...ATTTCTGGCCTTCAACTTCTCCCCTTGACCGGGTCCAACTCTGCCACTCATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp AGGCTAGACCGTGGGAAGTGCATCTTATCACTTGTGCTGTGGCGTTTGTTGGTGATGCACTGCTGTGGCTaGGGTGGTGGTGTGAACTTG +
Preference number: 4 (lower is better)
Translates to: RLDRGKCILSLVLWRLLVMHCCG*GGGVNL
Trigger: CAAGTTCACACCACCACCCCAGCCACAGCAGTGCAT...CACCAACAAACGCCACAGCACAAGTGATAAGATGCACTTCCCACGGTCTAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR CCA 90 bp TTCCCAGCCTGCAAATCTGCCAGTACTTCATCATCTGCCTGCCCACCATGGGGCCACAGTCGTACGCTCTaGTTCCACTTTGAAGGTGAT +
Preference number: 4 (lower is better)
Translates to: FPACKSASTSSSACPPWGHSRTL*FHFEGD
Trigger: ATCACCTTCAAAGTGGAACCAGAGCGTACGACTGTG...GCCCCATGGTGGGCAGGCAGATGATGAAGTACTGGCAGATTTGCAGGCTGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR CCA 90 bp GAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCACCGACAACCCAATaGTCTGGATCATCTTGTAGG +
Preference number: 4 (lower is better)
Translates to: EDRDLAHHAVSFPLEMSSPPTTQ*SGSSCR
Trigger: CCTACAAGATGATCCAGACCATTGGGTTGTCGGTGG...GGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CCA 90 bp GATGTAGGCCACAGCGGCACCCACCGACAACCCAATGGTCTGGATCATCTTGTACCACCGACAACCCAATaGTCTGGATCATCTTGTAGG +
Preference number: 4 (lower is better)
Translates to: DVGHSGTHRQPNGLDHLVPPTTQ*SGSSCR
Trigger: CCTACAAGATGATCCAGACCATTGGGTTGTCGGTGG...TACAAGATGATCCAGACCATTGGGTTGTCGGTGGGTGCCGCTGTGGCCTACATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
CDS-3UTR CCA 90 bp CCAGAAATTGGGGTTACCTGTGGCACCCACACTGTCCCTGATAGAGGAAGAGGTTTATCACTTGTGCTGTaGCGTTTGTTGGTGGCCGCG +
Preference number: 4 (lower is better)
Translates to: PEIGVTCGTHTVPDRGRGLSLVL*RLLVAA
Trigger: CGCGGCCACCAACAAACGCCACAGCACAAGTGATAA...ACCTCTTCCTCTATCAGGGACAGTGTGGGTGCCACAGGTAACCCCAATTTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp CTAGACCGTGGGAAGTGCATCTTATCACTTGTGCTGTGGCGTTTGTTGGTGGCCTTATCACTTGTGCTGTaGCGTTTGTTGGTGGCCGCG +
Preference number: 4 (lower is better)
Translates to: LDRGKCILSLVLWRLLVALSLVL*RLLVAA
Trigger: CGCGGCCACCAACAAACGCCACAGCACAAGTGATAA...GGCCACCAACAAACGCCACAGCACAAGTGATAAGATGCACTTCCCACGGTCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
CDS-3UTR CCA 90 bp CCAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTGCAGGCTAGACCGTaGGAAGTGCATCTTATCACT +
Preference number: 4 (lower is better)
Translates to: PGGQGSCPSCCELPSRDVLQARP*EVHLIT
Trigger: AGTGATAAGATGCACTTCCCACGGTCTAGCCTGCAG...GACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CCA 90 bp ACCTTCACTTGTCTCTGGGCACTGACCAGGCAGTTACGCGCAGCCAAGTCCTTACTGCAGGCTAGACCGTaGGAAGTGCATCTTATCACT +
Preference number: 4 (lower is better)
Translates to: TFTCLWALTRQLRAAKSLLQARP*EVHLIT
Trigger: AGTGATAAGATGCACTTCCCACGGTCTAGCCTGCAG...TAAGGACTTGGCTGCGCGTAACTGCCTGGTCAGTGCCCAGAGACAAGTGAAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
CDS-3UTR CCA 90 bp AGCGCTGCATCAGCCGATAGAGTTTGGAAGGGCAGCCCTCGGGCTGAGGAAGTCTTTCATCCTTGCTCTTaGAAATCCTCAGGAACTGCT +
Preference number: 4 (lower is better)
Translates to: SAASADRVWKGSPRAEEVFHPCS*KSSGTA
Trigger: AGCAGTTCCTGAGGATTTCCAAGAGCAAGGATGAAA...GACTTCCTCAGCCCGAGGGCTGCCCTTCCAAACTCTATCGGCTGATGCAGCGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
CDS-3UTR CCA 90 bp ACCTTCACTTGTCTCTGGGCACTGACCAGGCAGTTACGCGCAGCCAAGTCCTTAACCTTCACTTGTCTCTaGGCACTGACCAGGCAGTTA +
Preference number: 4 (lower is better)
Translates to: TFTCLWALTRQLRAAKSLTFTCL*ALTRQL
Trigger: TAACTGCCTGGTCAGTGCCCAGAGACAAGTGAAGGT...TAAGGACTTGGCTGCGCGTAACTGCCTGGTCAGTGCCCAGAGACAAGTGAAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
CDS-3UTR CCA 90 bp TCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTCCTCTATAATTCTGCCTGCCCACCATaGGGCATCTCTCCATGTGTA +
Preference number: 4 (lower is better)
Translates to: SVCTSPEWGGLTCCVLYNSACPP*GISPCV
Trigger: TACACATGGAGAGATGCCCCATGGTGGGCAGGCAGA...ATTATAGAGGACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp CTTGAGAATATTAAGGAACTCCCCACAAACCCAGCTCATCCCAAGCCTAGCCCTCCTAGTCGCCCAGTTTaGGTCCAAGTCAGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: LENIKELPTNPAHPKPSPPSRPV*VQVSLP
Trigger: TGGGAGGCTGACTTGGACCCAAACTGGGCGACTAGG...AGGGCTAGGCTTGGGATGAGCTGGGTTTGTGGGGAGTTCCTTAATATTCTCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp CAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTTGAAGGCCAGAAATTaGGGTTACCTGTGGCACCCA +
Preference number: 4 (lower is better)
Translates to: QEDRDLAHHAVSFPLEMSLKARN*GYLWHP
Trigger: TGGGTGCCACAGGTAACCCCAATTTCTGGCCTTCAA...GGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp GAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCTATAAAAGCCGCCCGTaGTGCATACAAAAAGGGCGG +
Preference number: 4 (lower is better)
Translates to: EDRDLAHHAVSFPLEMSSYKSRP*CIQKGR
Trigger: CCGCCCTTTTTGTATGCACCACGGGCGGCTTTTATA...GGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp TGTGTCCTCTATAATCCTGGTCTAGACCCCCAAGTGGGACCAGTGGGCCAAGAGTATAAAAGCCGCCCGTaGTGCATACAAAAAGGGCGG +
Preference number: 4 (lower is better)
Translates to: CVLYNPGLDPQVGPVGQEYKSRP*CIQKGR
Trigger: CCGCCCTTTTTGTATGCACCACGGGCGGCTTTTATA...CTCTTGGCCCACTGGTCCCACTTGGGGGTCTAGACCAGGATTATAGAGGACACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp CAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCACAACAATAAAAGTGTaGGGTAAGGATGGCCCACCC +
Preference number: 4 (lower is better)
Translates to: QGSCPSCCELPSRDVLPCTTIKV*GKDGPP
Trigger: GGGTGGGCCATCCTTACCCCACACTTTTATTGTTGT...GCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
3UTR CAA 72 bp CAACGGTACCATGTCCCATCATACACCTCCACGCTGTaGATGCGCAAGGTCCCATTCTTGAAGACCTCGAAC +
Preference number: 4 (lower is better)
Translates to: QRYHVPSYTSTL*MRKVPFLKTSN
Trigger: GTTCGAGGTCTTCAAGAATGGGACCTTGCGCATCAACAGCGTGGAGGTGTATGATGGGACATGGTACCGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR TCA 90 bp CCATTTTTCTGTGAGGGCTGTCACTATTTCCTCTGGAGCACCCACCCTAACCCCTCAATCTCTGCTAGGTaGAGTGTGGCTTCCAGGATG +
Preference number: 4 (lower is better)
Translates to: PFFCEGCHYFLWSTHPNPSISAR*SVASRM
Trigger: CATCCTGGAAGCCACACTTCACCTAGCAGAGATTGA...GGGGTTAGGGTGGGTGCTCCAGAGGAAATAGTGACAGCCCTCACAGAAAAATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471863.5
CDS-3UTR TCA 90 bp GGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTCCTCTATAGGTGCTGAGGGGCTGTaGCTTCAATTTTTCATCCTT +
Preference number: 4 (lower is better)
Translates to: GQCAQAQSGEDSLAVSSIGAEGL*LQFFIL
Trigger: AAGGATGAAAAATTGAAGTCACAGCCCCTCAGCACC...TATAGAGGACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR TCA 90 bp GAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCGGTGCTGAGGGGCTGTaGCTTCAATTTTTCATCCTT +
Preference number: 4 (lower is better)
Translates to: EDRDLAHHAVSFPLEMSSGAEGL*LQFFIL
Trigger: AAGGATGAAAAATTGAAGTCACAGCCCCTCAGCACC...GGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR TCA 90 bp CACATCAGCACACCGAAGGCCCAGACATCAGACTTGGTAGAGAAGTCACCCTCCGGTGCTGAGGGGCTGTaGCTTCAATTTTTCATCCTT +
Preference number: 4 (lower is better)
Translates to: HISTPKAQTSDLVEKSPSGAEGL*LQFFIL
Trigger: AAGGATGAAAAATTGAAGTCACAGCCCCTCAGCACC...GGAGGGTGACTTCTCTACCAAGTCTGATGTCTGGGCCTTCGGTGTGCTGATGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
CDS-3UTR TCA 90 bp CAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCGGTGCTGAGGGGCTGTaGCTTCAATTTTTCATCCTT +
Preference number: 4 (lower is better)
Translates to: QEDRDLAHHAVSFPLEMSGAEGL*LQFFIL
Trigger: AAGGATGAAAAATTGAAGTCACAGCCCCTCAGCACC...GGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR TCA 90 bp ACCAGTGGGCCAAGAGACTCATTAACCCTGTGTGCCCAGAACTTGAGAATATTACTTGTCTCTGGGCACTaGCCAGGCAGTTACGCGCAG +
Preference number: 4 (lower is better)
Translates to: TSGPRDSLTLCAQNLRILLVSGH*PGSYAQ
Trigger: CTGCGCGTAACTGCCTGGTCAGTGCCCAGAGACAAG...TAATATTCTCAAGTTCTGGGCACACAGGGTTAATGAGTCTCTTGGCCCACTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR TCA 90 bp CCAGAAATTGGGGTTACCTGTGGCACCCACACTGTCCCTGATAGAGGAAGAGGTGTCAAGGGGAGAAGTTaGAGGCCAGAAATTGGGGTT +
Preference number: 4 (lower is better)
Translates to: PEIGVTCGTHTVPDRGRGVKGRS*RPEIGV
Trigger: AACCCCAATTTCTGGCCTTCAACTTCTCCCCTTGAC...ACCTCTTCCTCTATCAGGGACAGTGTGGGTGCCACAGGTAACCCCAATTTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp CACCGCGCCCAGCCTGATATAAAGGGTTTATCATGTGTACTTTCAGTCATATGTCAAAGCTCAGGCTGCTaGCCTGGGCGAAACGCCGCT +
Preference number: 4 (lower is better)
Translates to: HRAQPDIKGLSCVLSVICQSSGC*PGRNAA
Trigger: AGCGGCGTTTCGCCCAGGGCAGCAGCCTGAGCTTTG...ACATATGACTGAAAGTACACATGATAAACCCTTTATATCAGGCTGGGCGCGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471863.5
CDS-3UTR GCA 90 bp CACCGCGCCCAGCCTGATATAAAGGGTTTATCATGTGTACTTTCAGTCATATGTCTGCAAAGCTCAGGCTaGTGCCCTGGGCGAAACGCC +
Preference number: 4 (lower is better)
Translates to: HRAQPDIKGLSCVLSVICLQSSG*CPGRNA
Trigger: GGCGTTTCGCCCAGGGCAGCAGCCTGAGCTTTGCAG...ACATATGACTGAAAGTACACATGATAAACCCTTTATATCAGGCTGGGCGCGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471863.5
CDS-3UTR GCA 90 bp CACCGCGCCCAGCCTGATATAAAGGGTTTATCATGTGTACTTTCAGTCATATGTCAGCCGGTCCACAGCTaGAAAGCTCAGGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: HRAQPDIKGLSCVLSVICQPVHS*KAQAAA
Trigger: GGCAGCAGCCTGAGCTTTGCAGCTGTGGACCGGCTG...ACATATGACTGAAAGTACACATGATAAACCCTTTATATCAGGCTGGGCGCGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471863.5
CDS-3UTR GCA 90 bp ACCAGTGGGCCAAGAGACTCATTAACCCTGTGTGCCCAGAACTTGAGAATATTACCACACACTGGAAGGTaGCAGAGTCCTGCAGCCGGT +
Preference number: 4 (lower is better)
Translates to: TSGPRDSLTLCAQNLRILPHTGR*QSPAAG
Trigger: ACCGGCTGCAGGACTCTGGCACCTTCCAGTGTGTGG...TAATATTCTCAAGTTCTGGGCACACAGGGTTAATGAGTCTCTTGGCCCACTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp GGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCAGGACCACAGGACCTaGCTCAATCCATTTGATGTT +
Preference number: 4 (lower is better)
Translates to: GGQGSCPSCCELPSRDVLQDHRT*LNPFDV
Trigger: AACATCAAATGGATTGAGGCAGGTCCTGTGGTCCTG...GAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR GCA 90 bp ATTCCTAGTCTATTGCTCTTTCCTCTGTACCCAGAGGACCATTTTTCTGTGAGGGCAGCGGTAGATCCCTaGATTGCGTGGCCGGACCTG +
Preference number: 4 (lower is better)
Translates to: IPSLLLFPLYPEDHFSVRAAVDP*IAWPDL
Trigger: CAGGTCCGGCCACGCAATGCAGGGATCTACCGCTGC...CCTCACAGAAAAATGGTCCTCTGGGTACAGAGGAAAGAGCAATAGACTAGGAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471863.5
CDS-3UTR GCA 90 bp AAAGCCGCCCGTGGTGCATACAAAAAGGGCGGTTTATATAGTGTCAAAAGCTCCTCTGCCCCTGGCCAATaGAGCGGTAGATCCCTGCAT +
Preference number: 4 (lower is better)
Translates to: KAARGAYKKGGLYSVKSSSAPGQ*SGRSLH
Trigger: ATGCAGGGATCTACCGCTGCATTGGCCAGGGGCAGA...GGAGCTTTTGACACTATATAAACCGCCCTTTTTGTATGCACCACGGGCGGCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp GTGTGCCCAGAACTTGAGAATATTAAGGAACTCCCCACAAACCCAGCTCATCCCCCTTGTCAAACTCCATaGACTGCTGTGGCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: VCPELENIKELPTNPAHPPCQTP*TAVAGV
Trigger: CACCCCAGCCACAGCAGTGCATGGAGTTTGACAAGG...GGGATGAGCTGGGTTTGTGGGGAGTTCCTTAATATTCTCAAGTTCTGGGCACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp CAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCCAATGCAAGTGTAGTTaGCAGCGTCATCTCGAGTCA +
Preference number: 4 (lower is better)
Translates to: QEDRDLAHHAVSFPLEMSQCKCS*QRHLES
Trigger: TGACTCGAGATGACGCTGGCAACTACACTTGCATTG...GGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR GCA 90 bp CTGGTCAAGGCCACTTCTTCTTGGATCTCTGCTGAGGGCTGCCCGTTCTGCAAACAATGCAAGTGTAGTTaGCAGCGTCATCTCGAGTCA +
Preference number: 4 (lower is better)
Translates to: LVKATSSWISAEGCPFCKQCKCS*QRHLES
Trigger: TGACTCGAGATGACGCTGGCAACTACACTTGCATTG...TTTGCAGAACGGGCAGCCCTCAGCAGAGATCCAAGAAGAAGTGGCCTTGACCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR GCA 90 bp GGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCAATGCAAGTGTAGTTaGCAGCGTCATCTCGAGTCA +
Preference number: 4 (lower is better)
Translates to: GGQGSCPSCCELPSRDVLQCKCS*QRHLES
Trigger: TGACTCGAGATGACGCTGGCAACTACACTTGCATTG...GAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR GCA 90 bp TCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTCCTCTATAATCCATTCTGGAAGATGTaGATCCTGGGTCCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: SVCTSPEWGGLTCCVLYNPFWKM*ILGPSL
Trigger: CAAGCTGGGACCCAGGATGCACATCTTCCAGAATGG...ATTATAGAGGACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000470019.5
CDS-3UTR GCA 90 bp CTTGAGAATATTAAGGAACTCCCCACAAACCCAGCTCATCCCAAGCCTAGCCCTAGCTGTTGCCTGCAATaGAGGTGTAGCGGCCTGAGT +
Preference number: 4 (lower is better)
Translates to: LENIKELPTNPAHPKPSPSCCLQ*RCSGLS
Trigger: ACTCAGGCCGCTACACCTGCATTGCAGGCAACAGCT...AGGGCTAGGCTTGGGATGAGCTGGGTTTGTGGGGAGTTCCTTAATATTCTCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000470019.5
CDS-3UTR GCA 90 bp AAAGCCGCCCGTGGTGCATACAAAAAGGGCGGTTTATATAGTGTCAAAAGCTCCGTTGCAGCTGTTGCCTaGAATGCAGGTGTAGCGGCC +
Preference number: 4 (lower is better)
Translates to: KAARGAYKKGGLYSVKSSVAAVA*NAGVAA
Trigger: GGCCGCTACACCTGCATTGCAGGCAACAGCTGCAAC...GGAGCTTTTGACACTATATAAACCGCCCTTTTTGTATGCACCACGGGCGGCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000470019.5
CDS-3UTR GCA 90 bp CAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCGCATCTTATCACTTGTaGTGTGGCGTTTGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: QEDRDLAHHAVSFPLEMSASYHL*CGVCWW
Trigger: CCACCAACAAACGCCACAGCACAAGTGATAAGATGC...GGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000481273.5
CDS-3UTR GCA 90 bp GGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTCCTCTATACTAGACCGTGGGAAGTaGATCTTATCACTTGTGCTG +
Preference number: 4 (lower is better)
Translates to: GQCAQAQSGEDSLAVSSILDRGK*ILSLVL
Trigger: CAGCACAAGTGATAAGATGCACTTCCCACGGTCTAG...TATAGAGGACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp CAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCCTAGACCGTGGGAAGTaGATCTTATCACTTGTGCTG +
Preference number: 4 (lower is better)
Translates to: QEDRDLAHHAVSFPLEMSLDRGK*ILSLVL
Trigger: CAGCACAAGTGATAAGATGCACTTCCCACGGTCTAG...GGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000481273.5
CDS-3UTR GCA 90 bp TCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTCCTCTATAATACTTCATCATCTGCCTaGCCACCATGGGGCATCTCT +
Preference number: 4 (lower is better)
Translates to: SVCTSPEWGGLTCCVLYNTSSSA*PPWGIS
Trigger: AGAGATGCCCCATGGTGGGCAGGCAGATGATGAAGT...ATTATAGAGGACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp ACCAGTGGGCCAAGAGACTCATTAACCCTGTGTGCCCAGAACTTGAGAATATTATCCCTCCTCACGGCTTaGTGTCCACGGTGCTGTCTC +
Preference number: 4 (lower is better)
Translates to: TSGPRDSLTLCAQNLRILSLLTA*CPRCCL
Trigger: GAGACAGCACCGTGGACAGCAAGCCGTGAGGAGGGA...TAATATTCTCAAGTTCTGGGCACACAGGGTTAATGAGTCTCTTGGCCCACTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp TTGTCTCTGGGCACTGACCAGGCAGTTACGCGCAGCCAAGTCCTTATGCACAAAGGATCTTGCCCATCATaGTGTGAGCTTCCCTCTAGA +
Preference number: 4 (lower is better)
Translates to: LSLGTDQAVTRSQVLMHKGSCPS*CELPSR
Trigger: TCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCC...TTTGTGCATAAGGACTTGGCTGCGCGTAACTGCCTGGTCAGTGCCCAGAGACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
CDS-3UTR GCA 90 bp TCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTCCTCTATAATGGAGGACAGGGATCTTaGCCATCATGCTGTGAGCTT +
Preference number: 4 (lower is better)
Translates to: SVCTSPEWGGLTCCVLYNGGQGS*PSCCEL
Trigger: AAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCC...ATTATAGAGGACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp CTTGAGAATATTAAGGAACTCCCCACAAACCCAGCTCATCCCAAGCCTAGCCCTGGTGGCAGGGAAAACTaGCCAGCTCAAAGCCCTAGT +
Preference number: 4 (lower is better)
Translates to: LENIKELPTNPAHPKPSPGGREN*PAQSPS
Trigger: ACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCCACC...AGGGCTAGGCTTGGGATGAGCTGGGTTTGTGGGGAGTTCCTTAATATTCTCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp GCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTCAGCCTCCCAAAGGCTCATTAACCCTGTGTaGCCAGAACTTGAGAATATT +
Preference number: 4 (lower is better)
Translates to: AQLKALVAQFGSKSASQRLINPV*PELENI
Trigger: AATATTCTCAAGTTCTGGGCACACAGGGTTAATGAG...CCTTTGGGAGGCTGACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp CCAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCTGGGGAGGACTCACTTaGTGTGTCCTCTATAATCCT +
Preference number: 4 (lower is better)
Translates to: PGGQGSCPSCCELPSRDVWGGLT*CVLYNP
Trigger: AGGATTATAGAGGACACAGCAAGTGAGTCCTCCCCA...GACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp ATGCCCACCCACCCCACGCTGCAATTACATATAAAAGCCGCCCGTGGTGCATACTGGGGAGGACTCACTTaGTGTGTCCTCTATAATCCT +
Preference number: 4 (lower is better)
Translates to: MPTHPTLQLHIKAARGAYWGGLT*CVLYNP
Trigger: AGGATTATAGAGGACACAGCAAGTGAGTCCTCCCCA...GTATGCACCACGGGCGGCTTTTATATGTAATTGCAGCGTGGGGTGGGTGGGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp CAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCGAAAACTCCTTCATCTaGCAGGCACTTAGGATGAGG +
Preference number: 4 (lower is better)
Translates to: QEDRDLAHHAVSFPLEMSENSFI*QALRMR
Trigger: CCTCATCCTAAGTGCCTGGCAGATGAAGGAGTTTTC...GGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp ATGCCCACCCACCCCACGCTGCAATTACATATAAAAGCCGCCCGTGGTGCATACGAAAACTCCTTCATCTaGCAGGCACTTAGGATGAGG +
Preference number: 4 (lower is better)
Translates to: MPTHPTLQLHIKAARGAYENSFI*QALRMR
Trigger: CCTCATCCTAAGTGCCTGGCAGATGAAGGAGTTTTC...GTATGCACCACGGGCGGCTTTTATATGTAATTGCAGCGTGGGGTGGGTGGGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp CCAGAAATTGGGGTTACCTGTGGCACCCACACTGTCCCTGATAGAGGAAGAGGTAAAAGCCGCCCGTGGTaGATACAAAAAGGGCGGTTT +
Preference number: 4 (lower is better)
Translates to: PEIGVTCGTHTVPDRGRGKSRPW*IQKGRF
Trigger: AAACCGCCCTTTTTGTATGCACCACGGGCGGCTTTT...ACCTCTTCCTCTATCAGGGACAGTGTGGGTGCCACAGGTAACCCCAATTTCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp AGGCCAGAAATTGGGGTTACCTGTGGCACCCACACTGTCCCTGATAGAGGAAGATGCTCATCCTTGCTCTaGAGGCTCTTCACAAGTACC +
Preference number: 4 (lower is better)
Translates to: RPEIGVTCGTHTVPDRGRCSSLL*RLFTST
Trigger: GGTACTTGTGAAGAGCCTGCAGAGCAAGGATGAGCA...TCTTCCTCTATCAGGGACAGTGTGGGTGCCACAGGTAACCCCAATTTCTGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp ACCAGTGGGCCAAGAGACTCATTAACCCTGTGTGCCCAGAACTTGAGAATATTAAAGACAATGGCTGTCTaGGTACCGCCCAGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: TSGPRDSLTLCAQNLRILKTMAV*VPPSSG
Trigger: GCCGCTGCTGGGCGGTACCCAGACAGCCATTGTCTT...TAATATTCTCAAGTTCTGGGCACACAGGGTTAATGAGTCTCTTGGCCCACTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp GTGTGCCCAGAACTTGAGAATATTAAGGAACTCCCCACAAACCCAGCTCATCCCTGGCCAAAAGCACTGTaGGCGCAGCAGGAATACAGC +
Preference number: 4 (lower is better)
Translates to: VCPELENIKELPTNPAHPWPKAL*AQQEYS
Trigger: GCTGTATTCCTGCTGCGCCCACAGTGCTTTTGGCCA...GGGATGAGCTGGGTTTGTGGGGAGTTCCTTAATATTCTCAAGTTCTGGGCACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
CDS-3UTR CCA 90 bp CTGTACCCAGAGGACCATTTTTCTGTGAGGGCTGTCACTATTTCCTCTGGAGCATGGCCAAAAGCACTGTaGGCGCAGCAGGAATACAGC +
Preference number: 4 (lower is better)
Translates to: LYPEDHFSVRAVTISSGAWPKAL*AQQEYS
Trigger: GCTGTATTCCTGCTGCGCCCACAGTGCTTTTGGCCA...TGCTCCAGAGGAAATAGTGACAGCCCTCACAGAAAAATGGTCCTCTGGGTACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471863.5
CDS-3UTR CCA 90 bp CACTCTGTGCATTGGGAGCATAGTGGGACCCAGGTCTCTAGATTCCTAGTCTATCTCAAGGTGAAGTTCTaGCTGCTGCAAGCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: HSVHWEHSGTQVSRFLVYLKVKF*LLQAWP
Trigger: TGGCCAGGCTTGCAGCAGCCAGAACTTCACCTTGAG...ATAGACTAGGAATCTAGAGACCTGGGTCCCACTATGCTCCCAATGCACAGAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471863.5
CDS-3UTR CCA 90 bp AAAGCCGCCCGTGGTGCATACAAAAAGGGCGGTTTATATAGTGTCAAAAGCTCCAGCTTTTCCAGCACTTaGACACGGGCTTGCGCCTCG +
Preference number: 4 (lower is better)
Translates to: KAARGAYKKGGLYSVKSSSFSST*TRACAS
Trigger: CGAGGCGCAAGCCCGTGTCCAAGTGCTGGAAAAGCT...GGAGCTTTTGACACTATATAAACCGCCCTTTTTGTATGCACCACGGGCGGCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp CCAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCACAGTCGTACGCTCTaGTTCCACTTTGAAGGTGAT +
Preference number: 4 (lower is better)
Translates to: PGGQGSCPSCCELPSRDVHSRTL*FHFEGD
Trigger: ATCACCTTCAAAGTGGAACCAGAGCGTACGACTGTG...GACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CCA 90 bp CCAGAAATTGGGGTTACCTGTGGCACCCACACTGTCCCTGATAGAGGAAGAGGTCCACCGACAACCCAATaGTCTGGATCATCTTGTAGG +
Preference number: 4 (lower is better)
Translates to: PEIGVTCGTHTVPDRGRGPPTTQ*SGSSCR
Trigger: CCTACAAGATGATCCAGACCATTGGGTTGTCGGTGG...ACCTCTTCCTCTATCAGGGACAGTGTGGGTGCCACAGGTAACCCCAATTTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp CAGGCTAGACCGTGGGAAGTGCATCTTATCACTTGTGCTGTGGCGTTTGTTGGTTTATCACTTGTGCTGTaGCGTTTGTTGGTGGCCGCG +
Preference number: 4 (lower is better)
Translates to: QARPWEVHLITCAVAFVGLSLVL*RLLVAA
Trigger: CGCGGCCACCAACAAACGCCACAGCACAAGTGATAA...ACCAACAAACGCCACAGCACAAGTGATAAGATGCACTTCCCACGGTCTAGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
CDS-3UTR CCA 90 bp CCAGAAATTGGGGTTACCTGTGGCACCCACACTGTCCCTGATAGAGGAAGAGGTCTGCAGGCTAGACCGTaGGAAGTGCATCTTATCACT +
Preference number: 4 (lower is better)
Translates to: PEIGVTCGTHTVPDRGRGLQARP*EVHLIT
Trigger: AGTGATAAGATGCACTTCCCACGGTCTAGCCTGCAG...ACCTCTTCCTCTATCAGGGACAGTGTGGGTGCCACAGGTAACCCCAATTTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp CTCTGGGCACTGACCAGGCAGTTACGCGCAGCCAAGTCCTTATGCACAAAGCGGTTTCATCCTTGCTCTTaGAAATCCTCAGGAACTGCT +
Preference number: 4 (lower is better)
Translates to: LWALTRQLRAAKSLCTKRFHPCS*KSSGTA
Trigger: AGCAGTTCCTGAGGATTTCCAAGAGCAAGGATGAAA...CCGCTTTGTGCATAAGGACTTGGCTGCGCGTAACTGCCTGGTCAGTGCCCAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
CDS-3UTR CCA 90 bp AGGCCAGAAATTGGGGTTACCTGTGGCACCCACACTGTCCCTGATAGAGGAAGAACCTTCACTTGTCTCTaGGCACTGACCAGGCAGTTA +
Preference number: 4 (lower is better)
Translates to: RPEIGVTCGTHTVPDRGRTFTCL*ALTRQL
Trigger: TAACTGCCTGGTCAGTGCCCAGAGACAAGTGAAGGT...TCTTCCTCTATCAGGGACAGTGTGGGTGCCACAGGTAACCCCAATTTCTGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp TTGTCTCTGGGCACTGACCAGGCAGTTACGCGCAGCCAAGTCCTTATGCACAAAACCTTCACTTGTCTCTaGGCACTGACCAGGCAGTTA +
Preference number: 4 (lower is better)
Translates to: LSLGTDQAVTRSQVLMHKTFTCL*ALTRQL
Trigger: TAACTGCCTGGTCAGTGCCCAGAGACAAGTGAAGGT...TTTGTGCATAAGGACTTGGCTGCGCGTAACTGCCTGGTCAGTGCCCAGAGACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
CDS-3UTR CCA 90 bp AAAGCCGCCCGTGGTGCATACAAAAAGGGCGGTTTATATAGTGTCAAAAGCTCCTCAGCCGATAGAGTTTaGAAGGGCAGCCCTCGGGCT +
Preference number: 4 (lower is better)
Translates to: KAARGAYKKGGLYSVKSSSADRV*KGSPRA
Trigger: AGCCCGAGGGCTGCCCTTCCAAACTCTATCGGCTGA...GGAGCTTTTGACACTATATAAACCGCCCTTTTTGTATGCACCACGGGCGGCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp CTTGGCTTTGCAGCGCTTCTTGCAGTAGAACATGAGGCCCAGCACGGCAATGATTTGAAGGCCAGAAATTaGGGTTACCTGTGGCACCCA +
Preference number: 4 (lower is better)
Translates to: LGFAALLAVEHEAQHGNDLKARN*GYLWHP
Trigger: TGGGTGCCACAGGTAACCCCAATTTCTGGCCTTCAA...ATCATTGCCGTGCTGGGCCTCATGTTCTACTGCAAGAAGCGCTGCAAAGCCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR CCA 90 bp ACCAGTGGGCCAAGAGACTCATTAACCCTGTGTGCCCAGAACTTGAGAATATTAAGGGTGGGGAAGACGTaGGTCTGGGTCAGTGTGCAC +
Preference number: 4 (lower is better)
Translates to: TSGPRDSLTLCAQNLRILRVGKT*VWVSVH
Trigger: GTGCACACTGACCCAGACCCACGTCTTCCCCACCCT...TAATATTCTCAAGTTCTGGGCACACAGGGTTAATGAGTCTCTTGGCCCACTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp CAGATGAGTGGCAGAGTTGGACCCGGTCAAGGGGAGAAGTTGAAGGCCAGAAATTATAAAAGCCGCCCGTaGTGCATACAAAAAGGGCGG +
Preference number: 4 (lower is better)
Translates to: QMSGRVGPGQGEKLKARNYKSRP*CIQKGR
Trigger: CCGCCCTTTTTGTATGCACCACGGGCGGCTTTTATA...ATTTCTGGCCTTCAACTTCTCCCCTTGACCGGGTCCAACTCTGCCACTCATCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp GGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCACAACAATAAAAGTGTaGGGTAAGGATGGCCCACCC +
Preference number: 4 (lower is better)
Translates to: GGQGSCPSCCELPSRDVLTTIKV*GKDGPP
Trigger: GGGTGGGCCATCCTTACCCCACACTTTTATTGTTGT...GAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp TGCCTGCCCACCATGGGGCATCTCTCCATGTGTAAACACTTCCCACATCAGCACACAACAATAAAAGTGTaGGGTAAGGATGGCCCACCC +
Preference number: 4 (lower is better)
Translates to: CLPTMGHLSMCKHFPHQHTTIKV*GKDGPP
Trigger: GGGTGGGCCATCCTTACCCCACACTTTTATTGTTGT...GTGCTGATGTGGGAAGTGTTTACACATGGAGAGATGCCCCATGGTGGGCAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR CCA 90 bp GTGTGCCCAGAACTTGAGAATATTAAGGAACTCCCCACAAACCCAGCTCATCCCCGCACCACGTTGGCGTaGTTCAGCTTCCCAAACATC +
Preference number: 4 (lower is better)
Translates to: VCPELENIKELPTNPAHPRTTLA*FSFPNI
Trigger: GATGTTTGGGAAGCTGAACCACGCCAACGTGGTGCG...GGGATGAGCTGGGTTTGTGGGGAGTTCCTTAATATTCTCAAGTTCTGGGCACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp GAAGTGCATCTTATCACTTGTGCTGTGGCGTTTGTTGGTGGCCGCGGGGCCGGAAGGCTTGTCGACCGTTaGATGTTAAATAAACGACAG +
Preference number: 4 (lower is better)
Translates to: EVHLITCAVAFVGGRGAGRLVDR*MLNKRQ
Trigger: CTGTCGTTTATTTAACATCCAACGGTCGACAAGCCT...TCCGGCCCCGCGGCCACCAACAAACGCCACAGCACAAGTGATAAGATGCACTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461100.5
CDS-3UTR CCA 90 bp TGGGAGCATAGTGGGACCCAGGTCTCTAGATTCCTAGTCTATTGCTCTTTCCTCCCTAACCCCTGTGCCTaGCTCTCTACTGTCTACACC +
Preference number: 4 (lower is better)
Translates to: WEHSGTQVSRFLVYCSFLPNPCA*LSTVYT
Trigger: GGTGTAGACAGTAGAGAGCCAGGCACAGGGGTTAGG...GAGGAAAGAGCAATAGACTAGGAATCTAGAGACCTGGGTCCCACTATGCTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471863.5
CDS-3UTR CCA 90 bp CTGGGGCTACAGTTACCAGATACTAAGTGCCTGCCTGGTCCCTGGCAGGTCAAGCATGCAGCAGATAAATaGGTCCCAGACTTGAAGGAA +
Preference number: 4 (lower is better)
Translates to: LGLQLPDTKCLPGPWQVKHAADK*VPDLKE
Trigger: TTCCTTCAAGTCTGGGACCCATTTATCTGCTGCATG...CTTGACCTGCCAGGGACCAGGCAGGCACTTAGTATCTGGTAACTGTAGCCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476760.1
CDS-3UTR TCA 90 bp TGGGAGCATAGTGGGACCCAGGTCTCTAGATTCCTAGTCTATTGCTCTTTCCTCCAGCAATGCTCAAGGTaGAGTTCTGGCTGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: WEHSGTQVSRFLVYCSFLQQCSR*SSGCCK
Trigger: CTTGCAGCAGCCAGAACTTCACCTTGAGCATTGCTG...GAGGAAAGAGCAATAGACTAGGAATCTAGAGACCTGGGTCCCACTATGCTCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471863.5
CDS-3UTR TCA 90 bp CAGGCTAGACCGTGGGAAGTGCATCTTATCACTTGTGCTGTGGCGTTTGTTGGTGTGAGTCCTCTGAGATaGGCATCTGGTTTCTGTACC +
Preference number: 4 (lower is better)
Translates to: QARPWEVHLITCAVAFVGVSPLR*ASGFCT
Trigger: GGTACAGAAACCAGATGCTCATCTCAGAGGACTCAC...ACCAACAAACGCCACAGCACAAGTGATAAGATGCACTTCCCACGGTCTAGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR TCA 90 bp TCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTCCTCTATAATGTCAAGGGGAGAAGTTaGAGGCCAGAAATTGGGGTT +
Preference number: 4 (lower is better)
Translates to: SVCTSPEWGGLTCCVLYNVKGRS*RPEIGV
Trigger: AACCCCAATTTCTGGCCTTCAACTTCTCCCCTTGAC...ATTATAGAGGACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR TCA 90 bp TGTGTCCTCTATAATCCTGGTCTAGACCCCCAAGTGGGACCAGTGGGCCAAGAGAGTGTCAAAAGCTCCTaGAAACTCCTTCATCTGCCA +
Preference number: 4 (lower is better)
Translates to: CVLYNPGLDPQVGPVGQESVKSS*KLLHLP
Trigger: TGGCAGATGAAGGAGTTTTCAGGAGCTTTTGACACT...CTCTTGGCCCACTGGTCCCACTTGGGGGTCTAGACCAGGATTATAGAGGACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR TCA 90 bp CTTGAGAATATTAAGGAACTCCCCACAAACCCAGCTCATCCCAAGCCTAGCCCTTCCTCAGGAACTGCTTaGGGTCTCCCAGATCCACAT +
Preference number: 4 (lower is better)
Translates to: LENIKELPTNPAHPKPSPSSGTA*GLPDPH
Trigger: ATGTGGATCTGGGAGACCTCAAGCAGTTCCTGAGGA...AGGGCTAGGCTTGGGATGAGCTGGGTTTGTGGGGAGTTCCTTAATATTCTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR TCA 90 bp GTGTGCCCAGAACTTGAGAATATTAAGGAACTCCCCACAAACCCAGCTCATCCCTCCTCAGGAACTGCTTaGGGTCTCCCAGATCCACAT +
Preference number: 4 (lower is better)
Translates to: VCPELENIKELPTNPAHPSSGTA*GLPDPH
Trigger: ATGTGGATCTGGGAGACCTCAAGCAGTTCCTGAGGA...GGGATGAGCTGGGTTTGTGGGGAGTTCCTTAATATTCTCAAGTTCTGGGCACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR TCA 90 bp ATTCCTAGTCTATTGCTCTTTCCTCTGTACCCAGAGGACCATTTTTCTGTGAGGCCCTCCACCTCTCCTTaGCCTTCAGGGCAAAGGTGC +
Preference number: 4 (lower is better)
Translates to: IPSLLLFPLYPEDHFSVRPSTSP*PSGQRC
Trigger: GCACCTTTGCCCTGAAGGTCAAGGAGAGGTGGAGGG...CCTCACAGAAAAATGGTCCTCTGGGTACAGAGGAAAGAGCAATAGACTAGGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471863.5
CDS-3UTR GCA 90 bp CACCGCGCCCAGCCTGATATAAAGGGTTTATCATGTGTACTTTCAGTCATATGTCCACACACTGGAAGGTaGCAGAGTCCTGCAGCCGGT +
Preference number: 4 (lower is better)
Translates to: HRAQPDIKGLSCVLSVICPHTGR*QSPAAG
Trigger: ACCGGCTGCAGGACTCTGGCACCTTCCAGTGTGTGG...ACATATGACTGAAAGTACACATGATAAACCCTTTATATCAGGCTGGGCGCGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471863.5
CDS-3UTR GCA 90 bp CAGATGAGTGGCAGAGTTGGACCCGGTCAAGGGGAGAAGTTGAAGGCCAGAAATCAGGACCACAGGACCTaGCTCAATCCATTTGATGTT +
Preference number: 4 (lower is better)
Translates to: QMSGRVGPGQGEKLKARNQDHRT*LNPFDV
Trigger: AACATCAAATGGATTGAGGCAGGTCCTGTGGTCCTG...ATTTCTGGCCTTCAACTTCTCCCCTTGACCGGGTCCAACTCTGCCACTCATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp AAAGCCGCCCGTGGTGCATACAAAAAGGGCGGTTTATATAGTGTCAAAAGCTCCAGCTGTTGCCTGCAATaGAGGTGTAGCGGCCTGAGT +
Preference number: 4 (lower is better)
Translates to: KAARGAYKKGGLYSVKSSSCCLQ*RCSGLS
Trigger: ACTCAGGCCGCTACACCTGCATTGCAGGCAACAGCT...GGAGCTTTTGACACTATATAAACCGCCCTTTTTGTATGCACCACGGGCGGCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000470019.5
CDS-3UTR GCA 90 bp CAGATGAGTGGCAGAGTTGGACCCGGTCAAGGGGAGAAGTTGAAGGCCAGAAATCTAGACCGTGGGAAGTaGATCTTATCACTTGTGCTG +
Preference number: 4 (lower is better)
Translates to: QMSGRVGPGQGEKLKARNLDRGK*ILSLVL
Trigger: CAGCACAAGTGATAAGATGCACTTCCCACGGTCTAG...ATTTCTGGCCTTCAACTTCTCCCCTTGACCGGGTCCAACTCTGCCACTCATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp AGGCCAGAAATTGGGGTTACCTGTGGCACCCACACTGTCCCTGATAGAGGAAGACTAGACCGTGGGAAGTaGATCTTATCACTTGTGCTG +
Preference number: 4 (lower is better)
Translates to: RPEIGVTCGTHTVPDRGRLDRGK*ILSLVL
Trigger: CAGCACAAGTGATAAGATGCACTTCCCACGGTCTAG...TCTTCCTCTATCAGGGACAGTGTGGGTGCCACAGGTAACCCCAATTTCTGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp GCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTCAGCCTCCCAAAGGTCAATTTTTCATCCTTaGTCTTGGAAATCCTCAGGA +
Preference number: 4 (lower is better)
Translates to: AQLKALVAQFGSKSASQRSIFHP*SWKSSG
Trigger: TCCTGAGGATTTCCAAGAGCAAGGATGAAAAATTGA...CCTTTGGGAGGCTGACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp GTGTGCCCAGAACTTGAGAATATTAAGGAACTCCCCACAAACCCAGCTCATCCCCAGTACTTCATCATCTaGCTGCCCACCATGGGGCAT +
Preference number: 4 (lower is better)
Translates to: VCPELENIKELPTNPAHPQYFII*LPTMGH
Trigger: ATGCCCCATGGTGGGCAGGCAGATGATGAAGTACTG...GGGATGAGCTGGGTTTGTGGGGAGTTCCTTAATATTCTCAAGTTCTGGGCACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp TCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTCCTCTATAATCTAGCCTTCCCAGCCTaGAAATCTGCCAGTACTTCA +
Preference number: 4 (lower is better)
Translates to: SVCTSPEWGGLTCCVLYNLAFPA*KSASTS
Trigger: TGAAGTACTGGCAGATTTGCAGGCTGGGAAGGCTAG...ATTATAGAGGACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp CAGATGAGTGGCAGAGTTGGACCCGGTCAAGGGGAGAAGTTGAAGGCCAGAAATGAAAACTCCTTCATCTaGCAGGCACTTAGGATGAGG +
Preference number: 4 (lower is better)
Translates to: QMSGRVGPGQGEKLKARNENSFI*QALRMR
Trigger: CCTCATCCTAAGTGCCTGGCAGATGAAGGAGTTTTC...ATTTCTGGCCTTCAACTTCTCCCCTTGACCGGGTCCAACTCTGCCACTCATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp TCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTCCTCTATAATAAAAGCCGCCCGTGGTaGATACAAAAAGGGCGGTTT +
Preference number: 4 (lower is better)
Translates to: SVCTSPEWGGLTCCVLYNKSRPW*IQKGRF
Trigger: AAACCGCCCTTTTTGTATGCACCACGGGCGGCTTTT...ATTATAGAGGACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp ACCAGTGGGCCAAGAGACTCATTAACCCTGTGTGCCCAGAACTTGAGAATATTAAAGTACCAGGGTCTCTaGCACTCCCTCCTCCAAGCC +
Preference number: 4 (lower is better)
Translates to: TSGPRDSLTLCAQNLRILKYQGL*HSLLQA
Trigger: GGCTTGGAGGAGGGAGTGGCAGAGACCCTGGTACTT...TAATATTCTCAAGTTCTGGGCACACAGGGTTAATGAGTCTCTTGGCCCACTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp TGCCAGTACTTCATCATCTGCCTGCCCACCATGGGGCATCTCTCCATGTGTAAACTGGTCTTCCACTCTTaGCAACTTGGGTCCAATCAC +
Preference number: 4 (lower is better)
Translates to: CQYFIICLPTMGHLSMCKLVFHS*QLGSNH
Trigger: GTGATTGGACCCAAGTTGGCAAGAGTGGAAGACCAG...TTTACACATGGAGAGATGCCCCATGGTGGGCAGGCAGATGATGAAGTACTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461389.1
CDS-3UTR CCA 90 bp ATTCCTAGTCTATTGCTCTTTCCTCTGTACCCAGAGGACCATTTTTCTGTGAGGCCCTGCAGTGCATCCTaGGAGGACGGCTGCTTGATG +
Preference number: 4 (lower is better)
Translates to: IPSLLLFPLYPEDHFSVRPCSAS*EDGCLM
Trigger: CATCAAGCAGCCGTCCTCCCAGGATGCACTGCAGGG...CCTCACAGAAAAATGGTCCTCTGGGTACAGAGGAAAGAGCAATAGACTAGGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471863.5
CDS-3UTR CCA 90 bp CTTGAGAATATTAAGGAACTCCCCACAAACCCAGCTCATCCCAAGCCTAGCCCTCAACGAAGTGTGACCTaGGTCTGTGGCTGGATCTCA +
Preference number: 4 (lower is better)
Translates to: LENIKELPTNPAHPKPSPQRSVT*VCGWIS
Trigger: TGAGATCCAGCCACAGACCCAGGTCACACTTCGTTG...AGGGCTAGGCTTGGGATGAGCTGGGTTTGTGGGGAGTTCCTTAATATTCTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp AGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCCTCTGAGATGAGCATCTaGTTTCTGTACCAGACAACT +
Preference number: 4 (lower is better)
Translates to: RDLAHHAVSFPLEMSSPASEMSI*FLYQTT
Trigger: AGTTGTCTGGTACAGAAACCAGATGCTCATCTCAGA...GGCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR CCA 90 bp GTGTGCCCAGAACTTGAGAATATTAAGGAACTCCCCACAAACCCAGCTCATCCCCTGTGGCTGGGGTGGTaGTGTGAACTTGAGCTTTTC +
Preference number: 4 (lower is better)
Translates to: VCPELENIKELPTNPAHPLWLGW*CELELF
Trigger: GAAAAGCTCAAGTTCACACCACCACCCCAGCCACAG...GGGATGAGCTGGGTTTGTGGGGAGTTCCTTAATATTCTCAAGTTCTGGGCACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp CAGATGAGTGGCAGAGTTGGACCCGGTCAAGGGGAGAAGTTGAAGGCCAGAAATCACAGTCGTACGCTCTaGTTCCACTTTGAAGGTGAT +
Preference number: 4 (lower is better)
Translates to: QMSGRVGPGQGEKLKARNHSRTL*FHFEGD
Trigger: ATCACCTTCAAAGTGGAACCAGAGCGTACGACTGTG...ATTTCTGGCCTTCAACTTCTCCCCTTGACCGGGTCCAACTCTGCCACTCATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp AGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCCTTTCATCCTTGCTCTTaGAAATCCTCAGGAACTGCT +
Preference number: 4 (lower is better)
Translates to: RDLAHHAVSFPLEMSSPAFHPCS*KSSGTA
Trigger: AGCAGTTCCTGAGGATTTCCAAGAGCAAGGATGAAA...GGCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR CCA 90 bp CAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTCAGCCTCCCAAAGGATGTTTCATCCTTGCTCTTaGAAATCCTCAGGAACTGCT +
Preference number: 4 (lower is better)
Translates to: QLKALVAQFGSKSASQRMFHPCS*KSSGTA
Trigger: AGCAGTTCCTGAGGATTTCCAAGAGCAAGGATGAAA...CATCCTTTGGGAGGCTGACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp GAAGTTGAAGGCCAGAAATTGGGGTTACCTGTGGCACCCACACTGTCCCTGATAACCTTCACTTGTCTCTaGGCACTGACCAGGCAGTTA +
Preference number: 4 (lower is better)
Translates to: EVEGQKLGLPVAPTLSLITFTCL*ALTRQL
Trigger: TAACTGCCTGGTCAGTGCCCAGAGACAAGTGAAGGT...TATCAGGGACAGTGTGGGTGCCACAGGTAACCCCAATTTCTGGCCTTCAACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp GAAGTTGAAGGCCAGAAATTGGGGTTACCTGTGGCACCCACACTGTCCCTGATATTGAAGGCCAGAAATTaGGGTTACCTGTGGCACCCA +
Preference number: 4 (lower is better)
Translates to: EVEGQKLGLPVAPTLSLILKARN*GYLWHP
Trigger: TGGGTGCCACAGGTAACCCCAATTTCTGGCCTTCAA...TATCAGGGACAGTGTGGGTGCCACAGGTAACCCCAATTTCTGGCCTTCAACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp AAAGCCGCCCGTGGTGCATACAAAAAGGGCGGTTTATATAGTGTCAAAAGCTCCGATGAGTGGCAGAGTTaGACCCGGTCAAGGGGAGAA +
Preference number: 4 (lower is better)
Translates to: KAARGAYKKGGLYSVKSSDEWQS*TRSRGE
Trigger: TTCTCCCCTTGACCGGGTCCAACTCTGCCACTCATC...GGAGCTTTTGACACTATATAAACCGCCCTTTTTGTATGCACCACGGGCGGCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp GAAGTTGAAGGCCAGAAATTGGGGTTACCTGTGGCACCCACACTGTCCCTGATATATAAAAGCCGCCCGTaGTGCATACAAAAAGGGCGG +
Preference number: 4 (lower is better)
Translates to: EVEGQKLGLPVAPTLSLIYKSRP*CIQKGR
Trigger: CCGCCCTTTTTGTATGCACCACGGGCGGCTTTTATA...TATCAGGGACAGTGTGGGTGCCACAGGTAACCCCAATTTCTGGCCTTCAACTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR TCA 90 bp ACCAGTGGGCCAAGAGACTCATTAACCCTGTGTGCCCAGAACTTGAGAATATTAACACCTCCACGCTGTTaGTGCGCAAGGTCCCATTCT +
Preference number: 4 (lower is better)
Translates to: TSGPRDSLTLCAQNLRILTPPRC*CARSHS
Trigger: AGAATGGGACCTTGCGCATCAACAGCGTGGAGGTGT...TAATATTCTCAAGTTCTGGGCACACAGGGTTAATGAGTCTCTTGGCCCACTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR TCA 90 bp CCAGAAATTGGGGTTACCTGTGGCACCCACACTGTCCCTGATAGAGGAAGAGGTAGTGTCAAAAGCTCCTaGAAACTCCTTCATCTGCCA +
Preference number: 4 (lower is better)
Translates to: PEIGVTCGTHTVPDRGRGSVKSS*KLLHLP
Trigger: TGGCAGATGAAGGAGTTTTCAGGAGCTTTTGACACT...ACCTCTTCCTCTATCAGGGACAGTGTGGGTGCCACAGGTAACCCCAATTTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR TCA 90 bp ATTCCTAGTCTATTGCTCTTTCCTCTGTACCCAGAGGACCATTTTTCTGTGAGGCTCCCAGTAGTGAACTaGTTCCCAAGCCTGCAGGGC +
Preference number: 4 (lower is better)
Translates to: IPSLLLFPLYPEDHFSVRLPVVN*FPSLQG
Trigger: GCCCTGCAGGCTTGGGAATCAGTTCACTACTGGGAG...CCTCACAGAAAAATGGTCCTCTGGGTACAGAGGAAAGAGCAATAGACTAGGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471863.5
CDS-3UTR TCA 90 bp CCATTTTTCTGTGAGGGCTGTCACTATTTCCTCTGGAGCACCCACCCTAACCCCAGGACCATTTTTCTGTaGGGGCTGTCACTATTTCCT +
Preference number: 4 (lower is better)
Translates to: PFFCEGCHYFLWSTHPNPRTIFL*GLSLFP
Trigger: AGGAAATAGTGACAGCCCTCACAGAAAAATGGTCCT...GGGGTTAGGGTGGGTGCTCCAGAGGAAATAGTGACAGCCCTCACAGAAAAATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000471863.5
CDS-3UTR TCA 90 bp TCTGTGAGGGCTGTCACTATTTCCTCTGGAGCACCCACCCTAACCCCTGTGCCTTTCATCTACTTCATTTaGCCTTTCCAACCACCTTGT +
Preference number: 4 (lower is better)
Translates to: SVRAVTISSGAPTLTPVPFIYFI*PFQPPC
Trigger: ACAAGGTGGTTGGAAAGGTCAAATGAAGTAGATGAA...AGGCACAGGGGTTAGGGTGGGTGCTCCAGAGGAAATAGTGACAGCCCTCACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471863.5
CDS-3UTR GCA 90 bp ATTCCTAGTCTATTGCTCTTTCCTCTGTACCCAGAGGACCATTTTTCTGTGAGGGAATACAGCCCACTATaGTCAGGACCAGCTGGCCGG +
Preference number: 4 (lower is better)
Translates to: IPSLLLFPLYPEDHFSVREYSPL*SGPAGR
Trigger: CCGGCCAGCTGGTCCTGAGCATAGTGGGCTGTATTC...CCTCACAGAAAAATGGTCCTCTGGGTACAGAGGAAAGAGCAATAGACTAGGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471863.5
CDS-3UTR GCA 90 bp CCTGATATAAAGGGTTTATCATGTGTACTTTCAGTCATATGTCTTGCTTTTCTCAGCCGGACTCCCGCGTaGTCCCACCACACGCTGGGC +
Preference number: 4 (lower is better)
Translates to: PDIKGLSCVLSVICLAFLSRTPA*SHHTLG
Trigger: GCCCAGCGTGTGGTGGGAGCACGCGGGAGTCCGGCT...GAGAAAAGCAAGACATATGACTGAAAGTACACATGATAAACCCTTTATATCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471863.5
CDS-3UTR GCA 90 bp TCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTCCTCTATAATGCATCTTATCACTTGTaGTGTGGCGTTTGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: SVCTSPEWGGLTCCVLYNASYHL*CGVCWW
Trigger: CCACCAACAAACGCCACAGCACAAGTGATAAGATGC...ATTATAGAGGACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp AAAGCCGCCCGTGGTGCATACAAAAAGGGCGGTTTATATAGTGTCAAAAGCTCCACTTCATCATCTGCCTaGCCACCATGGGGCATCTCT +
Preference number: 4 (lower is better)
Translates to: KAARGAYKKGGLYSVKSSTSSSA*PPWGIS
Trigger: AGAGATGCCCCATGGTGGGCAGGCAGATGATGAAGT...GGAGCTTTTGACACTATATAAACCGCCCTTTTTGTATGCACCACGGGCGGCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp CTTGAGAATATTAAGGAACTCCCCACAAACCCAGCTCATCCCAAGCCTAGCCCTCCCAGCCTGCAAATCTaGCAGTACTTCATCATCTGC +
Preference number: 4 (lower is better)
Translates to: LENIKELPTNPAHPKPSPPSLQI*QYFIIC
Trigger: GCAGATGATGAAGTACTGGCAGATTTGCAGGCTGGG...AGGGCTAGGCTTGGGATGAGCTGGGTTTGTGGGGAGTTCCTTAATATTCTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp CTTGAGAATATTAAGGAACTCCCCACAAACCCAGCTCATCCCAAGCCTAGCCCTCTAGCCTTCCCAGCCTaGAAATCTGCCAGTACTTCA +
Preference number: 4 (lower is better)
Translates to: LENIKELPTNPAHPKPSPLAFPA*KSASTS
Trigger: TGAAGTACTGGCAGATTTGCAGGCTGGGAAGGCTAG...AGGGCTAGGCTTGGGATGAGCTGGGTTTGTGGGGAGTTCCTTAATATTCTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp AGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCCCTCATTAACCCTGTGTaGCCAGAACTTGAGAATATT +
Preference number: 4 (lower is better)
Translates to: RDLAHHAVSFPLEMSSPALINPV*PELENI
Trigger: AATATTCTCAAGTTCTGGGCACACAGGGTTAATGAG...GGCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp CAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCCTCATTAACCCTGTGTaGCCAGAACTTGAGAATATT +
Preference number: 4 (lower is better)
Translates to: QGSCPSCCELPSRDVLPCLINPV*PELENI
Trigger: AATATTCTCAAGTTCTGGGCACACAGGGTTAATGAG...GCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp TCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTCCTCTATAATTGGGGAGGACTCACTTaGTGTGTCCTCTATAATCCT +
Preference number: 4 (lower is better)
Translates to: SVCTSPEWGGLTCCVLYNWGGLT*CVLYNP
Trigger: AGGATTATAGAGGACACAGCAAGTGAGTCCTCCCCA...ATTATAGAGGACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp TCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTCCTCTATAATGAAAACTCCTTCATCTaGCAGGCACTTAGGATGAGG +
Preference number: 4 (lower is better)
Translates to: SVCTSPEWGGLTCCVLYNENSFI*QALRMR
Trigger: CCTCATCCTAAGTGCCTGGCAGATGAAGGAGTTTTC...ATTATAGAGGACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp AAAGCCGCCCGTGGTGCATACAAAAAGGGCGGTTTATATAGTGTCAAAAGCTCCGCTGCTGCTCATCCTTaGTCTGCAGGCTCTTCACAA +
Preference number: 4 (lower is better)
Translates to: KAARGAYKKGGLYSVKSSAAAHP*SAGSSQ
Trigger: TTGTGAAGAGCCTGCAGAGCAAGGATGAGCAGCAGC...GGAGCTTTTGACACTATATAAACCGCCCTTTTTGTATGCACCACGGGCGGCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp GGGCTACAGTTACCAGATACTAAGTGCCTGCCTGGTCCCTGGCAGGTCAAGTCTATGATAAATGCATTCTaGCTGGCCCGTTTAACTGGA +
Preference number: 4 (lower is better)
Translates to: GLQLPDTKCLPGPWQVKSMINAF*LARLTG
Trigger: TCCAGTTAAACGGGCCAGGCAGAATGCATTTATCAT...AGACTTGACCTGCCAGGGACCAGGCAGGCACTTAGTATCTGGTAACTGTAGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476760.1
CDS-3UTR GCA 90 bp GGCTACAGTTACCAGATACTAAGTGCCTGCCTGGTCCCTGGCAGGTCAAGTCTGAAAGCTGATGATAAATaGATTCTGCCTGGCCCGTTT +
Preference number: 4 (lower is better)
Translates to: GYSYQILSACLVPGRSSLKADDK*ILPGPF
Trigger: AAACGGGCCAGGCAGAATGCATTTATCATCAGCTTT...CAGACTTGACCTGCCAGGGACCAGGCAGGCACTTAGTATCTGGTAACTGTAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476760.1
CDS-3UTR CCA 90 bp CACCGCGCCCAGCCTGATATAAAGGGTTTATCATGTGTACTTTCAGTCATATGTCTCAGCTTCCGAGGCTaGATGCTTCAGGACCACAGG +
Preference number: 4 (lower is better)
Translates to: HRAQPDIKGLSCVLSVICLSFRG*MLQDHR
Trigger: CCTGTGGTCCTGAAGCATCCAGCCTCGGAAGCTGAG...ACATATGACTGAAAGTACACATGATAAACCCTTTATATCAGGCTGGGCGCGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471863.5
CDS-3UTR CCA 90 bp ACCAGTGGGCCAAGAGACTCATTAACCCTGTGTGCCCAGAACTTGAGAATATTATGGCCAAAAGCACTGTaGGCGCAGCAGGAATACAGC +
Preference number: 4 (lower is better)
Translates to: TSGPRDSLTLCAQNLRILWPKAL*AQQEYS
Trigger: GCTGTATTCCTGCTGCGCCCACAGTGCTTTTGGCCA...TAATATTCTCAAGTTCTGGGCACACAGGGTTAATGAGTCTCTTGGCCCACTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
CDS-3UTR CCA 90 bp CTTGAGAATATTAAGGAACTCCCCACAAACCCAGCTCATCCCAAGCCTAGCCCTACTGGCAATGGAACATaGCCTCCTCATACCTCGCTA +
Preference number: 4 (lower is better)
Translates to: LENIKELPTNPAHPKPSPTGNGT*PPHTSL
Trigger: TAGCGAGGTATGAGGAGGCCATGTTCCATTGCCAGT...AGGGCTAGGCTTGGGATGAGCTGGGTTTGTGGGGAGTTCCTTAATATTCTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp TGGGAGCATAGTGGGACCCAGGTCTCTAGATTCCTAGTCTATTGCTCTTTCCTCACTGGCAATGGAACATaGCCTCCTCATACCTCGCTA +
Preference number: 4 (lower is better)
Translates to: WEHSGTQVSRFLVYCSFLTGNGT*PPHTSL
Trigger: TAGCGAGGTATGAGGAGGCCATGTTCCATTGCCAGT...GAGGAAAGAGCAATAGACTAGGAATCTAGAGACCTGGGTCCCACTATGCTCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471863.5
CDS-3UTR CCA 90 bp GTGTGCCCAGAACTTGAGAATATTAAGGAACTCCCCACAAACCCAGCTCATCCCGCTGAGAACTGGCAATaGAACATGGCCTCCTCATAC +
Preference number: 4 (lower is better)
Translates to: VCPELENIKELPTNPAHPAENWQ*NMASSY
Trigger: GTATGAGGAGGCCATGTTCCATTGCCAGTTCTCAGC...GGGATGAGCTGGGTTTGTGGGGAGTTCCTTAATATTCTCAAGTTCTGGGCACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp TGGGAGCATAGTGGGACCCAGGTCTCTAGATTCCTAGTCTATTGCTCTTTCCTCGCTGAGAACTGGCAATaGAACATGGCCTCCTCATAC +
Preference number: 4 (lower is better)
Translates to: WEHSGTQVSRFLVYCSFLAENWQ*NMASSY
Trigger: GTATGAGGAGGCCATGTTCCATTGCCAGTTCTCAGC...GAGGAAAGAGCAATAGACTAGGAATCTAGAGACCTGGGTCCCACTATGCTCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471863.5
CDS-3UTR CCA 90 bp GTGTGCCCAGAACTTGAGAATATTAAGGAACTCCCCACAAACCCAGCTCATCCCCACTTTCAGCAATATTaGCCAACACCAGCTCGTGGC +
Preference number: 4 (lower is better)
Translates to: VCPELENIKELPTNPAHPHFQQY*PTPARG
Trigger: GCCACGAGCTGGTGTTGGCCAATATTGCTGAAAGTG...GGGATGAGCTGGGTTTGTGGGGAGTTCCTTAATATTCTCAAGTTCTGGGCACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp CCAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCTCTGAGATGAGCATCTaGTTTCTGTACCAGACAACT +
Preference number: 4 (lower is better)
Translates to: PGGQGSCPSCCELPSRDVSEMSI*FLYQTT
Trigger: AGTTGTCTGGTACAGAAACCAGATGCTCATCTCAGA...GACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR CCA 90 bp GGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCTCTGAGATGAGCATCTaGTTTCTGTACCAGACAACT +
Preference number: 4 (lower is better)
Translates to: GGQGSCPSCCELPSRDVLSEMSI*FLYQTT
Trigger: AGTTGTCTGGTACAGAAACCAGATGCTCATCTCAGA...GAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR CCA 90 bp CTTGAGAATATTAAGGAACTCCCCACAAACCCAGCTCATCCCAAGCCTAGCCCTCCACCGACAACCCAATaGTCTGGATCATCTTGTAGG +
Preference number: 4 (lower is better)
Translates to: LENIKELPTNPAHPKPSPPPTTQ*SGSSCR
Trigger: CCTACAAGATGATCCAGACCATTGGGTTGTCGGTGG...AGGGCTAGGCTTGGGATGAGCTGGGTTTGTGGGGAGTTCCTTAATATTCTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp CCAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCTTTCATCCTTGCTCTTaGAAATCCTCAGGAACTGCT +
Preference number: 4 (lower is better)
Translates to: PGGQGSCPSCCELPSRDVFHPCS*KSSGTA
Trigger: AGCAGTTCCTGAGGATTTCCAAGAGCAAGGATGAAA...GACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR CCA 90 bp GGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCTTTCATCCTTGCTCTTaGAAATCCTCAGGAACTGCT +
Preference number: 4 (lower is better)
Translates to: GGQGSCPSCCELPSRDVLFHPCS*KSSGTA
Trigger: AGCAGTTCCTGAGGATTTCCAAGAGCAAGGATGAAA...GAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR CCA 90 bp CTTGAGAATATTAAGGAACTCCCCACAAACCCAGCTCATCCCAAGCCTAGCCCTACCTTCACTTGTCTCTaGGCACTGACCAGGCAGTTA +
Preference number: 4 (lower is better)
Translates to: LENIKELPTNPAHPKPSPTFTCL*ALTRQL
Trigger: TAACTGCCTGGTCAGTGCCCAGAGACAAGTGAAGGT...AGGGCTAGGCTTGGGATGAGCTGGGTTTGTGGGGAGTTCCTTAATATTCTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp CTTGAGAATATTAAGGAACTCCCCACAAACCCAGCTCATCCCAAGCCTAGCCCTTTGAAGGCCAGAAATTaGGGTTACCTGTGGCACCCA +
Preference number: 4 (lower is better)
Translates to: LENIKELPTNPAHPKPSPLKARN*GYLWHP
Trigger: TGGGTGCCACAGGTAACCCCAATTTCTGGCCTTCAA...AGGGCTAGGCTTGGGATGAGCTGGGTTTGTGGGGAGTTCCTTAATATTCTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp ACCAGTGGGCCAAGAGACTCATTAACCCTGTGTGCCCAGAACTTGAGAATATTATGCACAAGCCCAGAGTaGGGAGGACTCACTTGCTGT +
Preference number: 4 (lower is better)
Translates to: TSGPRDSLTLCAQNLRILCTSPE*GGLTCC
Trigger: ACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCA...TAATATTCTCAAGTTCTGGGCACACAGGGTTAATGAGTCTCTTGGCCCACTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp TCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTCCTCTATAATACAACAATAAAAGTGTaGGGTAAGGATGGCCCACCC +
Preference number: 4 (lower is better)
Translates to: SVCTSPEWGGLTCCVLYNTTIKV*GKDGPP
Trigger: GGGTGGGCCATCCTTACCCCACACTTTTATTGTTGT...ATTATAGAGGACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp CTGCAGGCTAGACCGTGGGAAGTGCATCTTATCACTTGTGCTGTGGCGTTTGTTTCTGGGCAGGGGCGTTaGATGTTAAATAAACGACAG +
Preference number: 4 (lower is better)
Translates to: LQARPWEVHLITCAVAFVSGQGR*MLNKRQ
Trigger: CTGTCGTTTATTTAACATCCAACGCCCCTGCCCAGA...AACAAACGCCACAGCACAAGTGATAAGATGCACTTCCCACGGTCTAGCCTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494146.5
3UTR CAA 72 bp GGGCCAAGAGACTCATTAACCCTGTGTGCCCAGAACTaGAGAATATTAAGGAACTCCCCACAAACCCAGCTC +
Preference number: 4 (lower is better)
Translates to: GPRDSLTLCAQN*RILRNSPQTQL
Trigger: GAGCTGGGTTTGTGGGGAGTTCCTTAATATTCTCAAGTTCTGGGCACACAGGGTTAATGAGTCTCTTGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR TCA 90 bp AAAGCCGCCCGTGGTGCATACAAAAAGGGCGGTTTATATAGTGTCAAAAGCTCCGTGAGTCCTCTGAGATaGGCATCTGGTTTCTGTACC +
Preference number: 4 (lower is better)
Translates to: KAARGAYKKGGLYSVKSSVSPLR*ASGFCT
Trigger: GGTACAGAAACCAGATGCTCATCTCAGAGGACTCAC...GGAGCTTTTGACACTATATAAACCGCCCTTTTTGTATGCACCACGGGCGGCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR TCA 90 bp GAAGTTGAAGGCCAGAAATTGGGGTTACCTGTGGCACCCACACTGTCCCTGATAAGTGTCAAAAGCTCCTaGAAACTCCTTCATCTGCCA +
Preference number: 4 (lower is better)
Translates to: EVEGQKLGLPVAPTLSLISVKSS*KLLHLP
Trigger: TGGCAGATGAAGGAGTTTTCAGGAGCTTTTGACACT...TATCAGGGACAGTGTGGGTGCCACAGGTAACCCCAATTTCTGGCCTTCAACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp TGGGAGCATAGTGGGACCCAGGTCTCTAGATTCCTAGTCTATTGCTCTTTCCTCCAGGACCACAGGACCTaGCTCAATCCATTTGATGTT +
Preference number: 4 (lower is better)
Translates to: WEHSGTQVSRFLVYCSFLQDHRT*LNPFDV
Trigger: AACATCAAATGGATTGAGGCAGGTCCTGTGGTCCTG...GAGGAAAGAGCAATAGACTAGGAATCTAGAGACCTGGGTCCCACTATGCTCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471863.5
CDS-3UTR GCA 90 bp CCTGATATAAAGGGTTTATCATGTGTACTTTCAGTCATATGTCTTGCTTTTCTCATGGGTGGGCCCCTCTaGCCCTGGCCAATGCAGCGG +
Preference number: 4 (lower is better)
Translates to: PDIKGLSCVLSVICLAFLMGGPL*PWPMQR
Trigger: CCGCTGCATTGGCCAGGGGCAGAGGGGCCCACCCAT...GAGAAAAGCAAGACATATGACTGAAAGTACACATGATAAACCCTTTATATCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471863.5
CDS-3UTR GCA 90 bp CTTGAGAATATTAAGGAACTCCCCACAAACCCAGCTCATCCCAAGCCTAGCCCTGCATCTTATCACTTGTaGTGTGGCGTTTGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: LENIKELPTNPAHPKPSPASYHL*CGVCWW
Trigger: CCACCAACAAACGCCACAGCACAAGTGATAAGATGC...AGGGCTAGGCTTGGGATGAGCTGGGTTTGTGGGGAGTTCCTTAATATTCTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp AGCCAAGTCCTTATGCACAAAGCGGTTGTTGGACAGGTGCTCCATGCCCAGGGCTCAATTTTTCATCCTTaGTCTTGGAAATCCTCAGGA +
Preference number: 4 (lower is better)
Translates to: SQVLMHKAVVGQVLHAQGSIFHP*SWKSSG
Trigger: TCCTGAGGATTTCCAAGAGCAAGGATGAAAAATTGA...GCCCTGGGCATGGAGCACCTGTCCAACAACCGCTTTGTGCATAAGGACTTGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
CDS-3UTR GCA 90 bp AGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCCTCAATTTTTCATCCTTaGTCTTGGAAATCCTCAGGA +
Preference number: 4 (lower is better)
Translates to: RDLAHHAVSFPLEMSSPASIFHP*SWKSSG
Trigger: TCCTGAGGATTTCCAAGAGCAAGGATGAAAAATTGA...GGCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR GCA 90 bp CTTATGCACAAAGCGGTTGTTGGACAGGTGCTCCATGCCCAGGGCTACCTGGGTTCAATTTTTCATCCTTaGTCTTGGAAATCCTCAGGA +
Preference number: 4 (lower is better)
Translates to: LMHKAVVGQVLHAQGYLGSIFHP*SWKSSG
Trigger: TCCTGAGGATTTCCAAGAGCAAGGATGAAAAATTGA...ACCCAGGTAGCCCTGGGCATGGAGCACCTGTCCAACAACCGCTTTGTGCATAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
CDS-3UTR GCA 90 bp CAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCTCAATTTTTCATCCTTaGTCTTGGAAATCCTCAGGA +
Preference number: 4 (lower is better)
Translates to: QGSCPSCCELPSRDVLPCSIFHP*SWKSSG
Trigger: TCCTGAGGATTTCCAAGAGCAAGGATGAAAAATTGA...GCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR GCA 90 bp AAAGCCGCCCGTGGTGCATACAAAAAGGGCGGTTTATATAGTGTCAAAAGCTCCGCAGCCAAGTCCTTATaGACAAAGCGGTTGTTGGAC +
Preference number: 4 (lower is better)
Translates to: KAARGAYKKGGLYSVKSSAAKSL*TKRLLD
Trigger: GTCCAACAACCGCTTTGTGCATAAGGACTTGGCTGC...GGAGCTTTTGACACTATATAAACCGCCCTTTTTGTATGCACCACGGGCGGCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp GGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCTCATTAACCCTGTGTaGCCAGAACTTGAGAATATT +
Preference number: 4 (lower is better)
Translates to: GGQGSCPSCCELPSRDVLLINPV*PELENI
Trigger: AATATTCTCAAGTTCTGGGCACACAGGGTTAATGAG...GAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp GAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCTCATTAACCCTGTGTaGCCAGAACTTGAGAATATT +
Preference number: 4 (lower is better)
Translates to: EDRDLAHHAVSFPLEMSSLINPV*PELENI
Trigger: AATATTCTCAAGTTCTGGGCACACAGGGTTAATGAG...GGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp AAAGCCGCCCGTGGTGCATACAAAAAGGGCGGTTTATATAGTGTCAAAAGCTCCAAAAGCCGCCCGTGGTaGATACAAAAAGGGCGGTTT +
Preference number: 4 (lower is better)
Translates to: KAARGAYKKGGLYSVKSSKSRPW*IQKGRF
Trigger: AAACCGCCCTTTTTGTATGCACCACGGGCGGCTTTT...GGAGCTTTTGACACTATATAAACCGCCCTTTTTGTATGCACCACGGGCGGCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp AAAGCCGCCCGTGGTGCATACAAAAAGGGCGGTTTATATAGTGTCAAAAGCTCCTGCTCATCCTTGCTCTaGAGGCTCTTCACAAGTACC +
Preference number: 4 (lower is better)
Translates to: KAARGAYKKGGLYSVKSSCSSLL*RLFTST
Trigger: GGTACTTGTGAAGAGCCTGCAGAGCAAGGATGAGCA...GGAGCTTTTGACACTATATAAACCGCCCTTTTTGTATGCACCACGGGCGGCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp ACCAGTGGGCCAAGAGACTCATTAACCCTGTGTGCCCAGAACTTGAGAATATTAGCTGCTGCTCATCCTTaGTCTGCAGGCTCTTCACAA +
Preference number: 4 (lower is better)
Translates to: TSGPRDSLTLCAQNLRILAAAHP*SAGSSQ
Trigger: TTGTGAAGAGCCTGCAGAGCAAGGATGAGCAGCAGC...TAATATTCTCAAGTTCTGGGCACACAGGGTTAATGAGTCTCTTGGCCCACTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp CCATTTTTCTGTGAGGGCTGTCACTATTTCCTCTGGAGCACCCACCCTAACCCCAGATTCCTAGTCTATTaGTCTTTCCTCTGTACCCAG +
Preference number: 4 (lower is better)
Translates to: PFFCEGCHYFLWSTHPNPRFLVY*SFLCTQ
Trigger: CTGGGTACAGAGGAAAGAGCAATAGACTAGGAATCT...GGGGTTAGGGTGGGTGCTCCAGAGGAAATAGTGACAGCCCTCACAGAAAAATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471863.5
CDS-3UTR CCA 90 bp CAGATGAGTGGCAGAGTTGGACCCGGTCAAGGGGAGAAGTTGAAGGCCAGAAATTCTGAGATGAGCATCTaGTTTCTGTACCAGACAACT +
Preference number: 4 (lower is better)
Translates to: QMSGRVGPGQGEKLKARNSEMSI*FLYQTT
Trigger: AGTTGTCTGGTACAGAAACCAGATGCTCATCTCAGA...ATTTCTGGCCTTCAACTTCTCCCCTTGACCGGGTCCAACTCTGCCACTCATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp AAAGCCGCCCGTGGTGCATACAAAAAGGGCGGTTTATATAGTGTCAAAAGCTCCCTGCAGGCTAGACCGTaGGAAGTGCATCTTATCACT +
Preference number: 4 (lower is better)
Translates to: KAARGAYKKGGLYSVKSSLQARP*EVHLIT
Trigger: AGTGATAAGATGCACTTCCCACGGTCTAGCCTGCAG...GGAGCTTTTGACACTATATAAACCGCCCTTTTTGTATGCACCACGGGCGGCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp CCAGAAATTGGGGTTACCTGTGGCACCCACACTGTCCCTGATAGAGGAAGAGGTTTTCATCCTTGCTCTTaGAAATCCTCAGGAACTGCT +
Preference number: 4 (lower is better)
Translates to: PEIGVTCGTHTVPDRGRGFHPCS*KSSGTA
Trigger: AGCAGTTCCTGAGGATTTCCAAGAGCAAGGATGAAA...ACCTCTTCCTCTATCAGGGACAGTGTGGGTGCCACAGGTAACCCCAATTTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp AAAGCCGCCCGTGGTGCATACAAAAAGGGCGGTTTATATAGTGTCAAAAGCTCCCAATGCAAGTGTAGTTaGCAGCGTCATCTCGAGTCA +
Preference number: 4 (lower is better)
Translates to: KAARGAYKKGGLYSVKSSQCKCS*QRHLES
Trigger: TGACTCGAGATGACGCTGGCAACTACACTTGCATTG...GGAGCTTTTGACACTATATAAACCGCCCTTTTTGTATGCACCACGGGCGGCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp GGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCTCAATTTTTCATCCTTaGTCTTGGAAATCCTCAGGA +
Preference number: 4 (lower is better)
Translates to: GGQGSCPSCCELPSRDVLSIFHP*SWKSSG
Trigger: TCCTGAGGATTTCCAAGAGCAAGGATGAAAAATTGA...GAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR GCA 90 bp CAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCAATTTTTCATCCTTaGTCTTGGAAATCCTCAGGA +
Preference number: 4 (lower is better)
Translates to: QEDRDLAHHAVSFPLEMSSIFHP*SWKSSG
Trigger: TCCTGAGGATTTCCAAGAGCAAGGATGAAAAATTGA...GGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR CCA 90 bp ACCAGTGGGCCAAGAGACTCATTAACCCTGTGTGCCCAGAACTTGAGAATATTAACTGGCAATGGAACATaGCCTCCTCATACCTCGCTA +
Preference number: 4 (lower is better)
Translates to: TSGPRDSLTLCAQNLRILTGNGT*PPHTSL
Trigger: TAGCGAGGTATGAGGAGGCCATGTTCCATTGCCAGT...TAATATTCTCAAGTTCTGGGCACACAGGGTTAATGAGTCTCTTGGCCCACTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CCA 90 bp AAAGCCGCCCGTGGTGCATACAAAAAGGGCGGTTTATATAGTGTCAAAAGCTCCCACAGTCGTACGCTCTaGTTCCACTTTGAAGGTGAT +
Preference number: 4 (lower is better)
Translates to: KAARGAYKKGGLYSVKSSHSRTL*FHFEGD
Trigger: ATCACCTTCAAAGTGGAACCAGAGCGTACGACTGTG...GGAGCTTTTGACACTATATAAACCGCCCTTTTTGTATGCACCACGGGCGGCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp ACCAGTGGGCCAAGAGACTCATTAACCCTGTGTGCCCAGAACTTGAGAATATTACTAGACCGTGGGAAGTaGATCTTATCACTTGTGCTG +
Preference number: 4 (lower is better)
Translates to: TSGPRDSLTLCAQNLRILLDRGK*ILSLVL
Trigger: CAGCACAAGTGATAAGATGCACTTCCCACGGTCTAG...TAATATTCTCAAGTTCTGGGCACACAGGGTTAATGAGTCTCTTGGCCCACTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR GCA 90 bp AGGCCAGAAATTGGGGTTACCTGTGGCACCCACACTGTCCCTGATAGAGGAAGATCAATTTTTCATCCTTaGTCTTGGAAATCCTCAGGA +
Preference number: 4 (lower is better)
Translates to: RPEIGVTCGTHTVPDRGRSIFHP*SWKSSG
Trigger: TCCTGAGGATTTCCAAGAGCAAGGATGAAAAATTGA...TCTTCCTCTATCAGGGACAGTGTGGGTGCCACAGGTAACCCCAATTTCTGGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR GCA 90 bp GAAGTTGAAGGCCAGAAATTGGGGTTACCTGTGGCACCCACACTGTCCCTGATACTCATTAACCCTGTGTaGCCAGAACTTGAGAATATT +
Preference number: 4 (lower is better)
Translates to: EVEGQKLGLPVAPTLSLILINPV*PELENI
Trigger: AATATTCTCAAGTTCTGGGCACACAGGGTTAATGAG...TATCAGGGACAGTGTGGGTGCCACAGGTAACCCCAATTTCTGGCCTTCAACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp CACCGCGCCCAGCCTGATATAAAGGGTTTATCATGTGTACTTTCAGTCATATGTCACTTTCAGCAATATTaGCCAACACCAGCTCGTGGC +
Preference number: 4 (lower is better)
Translates to: HRAQPDIKGLSCVLSVICHFQQY*PTPARG
Trigger: GCCACGAGCTGGTGTTGGCCAATATTGCTGAAAGTG...ACATATGACTGAAAGTACACATGATAAACCCTTTATATCAGGCTGGGCGCGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471863.5
CDS-3UTR CCA 90 bp CTTGAGAATATTAAGGAACTCCCCACAAACCCAGCTCATCCCAAGCCTAGCCCTTCTGAGATGAGCATCTaGTTTCTGTACCAGACAACT +
Preference number: 4 (lower is better)
Translates to: LENIKELPTNPAHPKPSPSEMSI*FLYQTT
Trigger: AGTTGTCTGGTACAGAAACCAGATGCTCATCTCAGA...AGGGCTAGGCTTGGGATGAGCTGGGTTTGTGGGGAGTTCCTTAATATTCTCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp GTGTGCCCAGAACTTGAGAATATTAAGGAACTCCCCACAAACCCAGCTCATCCCTTTCATCCTTGCTCTTaGAAATCCTCAGGAACTGCT +
Preference number: 4 (lower is better)
Translates to: VCPELENIKELPTNPAHPFHPCS*KSSGTA
Trigger: AGCAGTTCCTGAGGATTTCCAAGAGCAAGGATGAAA...GGGATGAGCTGGGTTTGTGGGGAGTTCCTTAATATTCTCAAGTTCTGGGCACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CCA 90 bp CCTGATATAAAGGGTTTATCATGTGTACTTTCAGTCATATGTCTTGCTTTTCTCCAACGAAGTGTGACCTaGGTCTGTGGCTGGATCTCA +
Preference number: 4 (lower is better)
Translates to: PDIKGLSCVLSVICLAFLQRSVT*VCGWIS
Trigger: TGAGATCCAGCCACAGACCCAGGTCACACTTCGTTG...GAGAAAAGCAAGACATATGACTGAAAGTACACATGATAAACCCTTTATATCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471863.5
CDS-3UTR CAA 90 bp ACCCTCCAGGATGGCCTCGGGGGACATCCAGCGCAGCGGCACCCAGGCCTGGCGCTTGTGCTGTGGCGTTaGTTGGTGGCCGCGGGGCCG +
Preference number: 5 (lower is better)
Translates to: TLQDGLGGHPAQRHPGLALVLWR*LVAAGP
Trigger: CGGCCCCGCGGCCACCAACAAACGCCACAGCACAAG...CGCCAGGCCTGGGTGCCGCTGCGCTGGATGTCCCCCGAGGCCATCCTGGAGGGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
CDS-3UTR CAA 90 bp TCCAGGATGGCCTCGGGGGACATCCAGCGCAGCGGCACCCAGGCCTGGCGGAAGCTTGTGCTGTGGCGTTaGTTGGTGGCCGCGGGGCCG +
Preference number: 5 (lower is better)
Translates to: SRMASGDIQRSGTQAWRKLVLWR*LVAAGP
Trigger: CGGCCCCGCGGCCACCAACAAACGCCACAGCACAAG...CTTCCGCCAGGCCTGGGTGCCGCTGCGCTGGATGTCCCCCGAGGCCATCCTGGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
CDS-3UTR CAA 90 bp CCTCGGGGGACATCCAGCGCAGCGGCACCCAGGCCTGGCGGAAGTGGTAGTACTGTGCTGTGGCGTTTGTaGGTGGCCGCGGGGCCGGAG +
Preference number: 5 (lower is better)
Translates to: PRGTSSAAAPRPGGSGSTVLWRL*VAAGPE
Trigger: CTCCGGCCCCGCGGCCACCAACAAACGCCACAGCAC...AGTACTACCACTTCCGCCAGGCCTGGGTGCCGCTGCGCTGGATGTCCCCCGAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
CDS-3UTR CAA 90 bp GCTGTGGCGTTTGTTGGTGGCCGCGGGGCCGGAGCCCAAGCTGGTCAAGGCCACCTTGTGCTGTGGCGTTaGTTGGTGGCCGCGGGGCCG +
Preference number: 5 (lower is better)
Translates to: AVAFVGGRGAGAQAGQGHLVLWR*LVAAGP
Trigger: CGGCCCCGCGGCCACCAACAAACGCCACAGCACAAG...GTGGCCTTGACCAGCTTGGGCTCCGGCCCCGCGGCCACCAACAAACGCCACAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
CDS GCA 90 bp AGGTGCCAGAGTCCTGCAGCCGGTCCACAGCTGCAAAGCTCAGGCTaGTGCCCTGGGCGAAACGCCGCTCCGTGTCCTGGACAGGGGCCC +
Preference number: 5 (lower is better)
Translates to: RCQSPAAGPQLQSSG*CPGRNAAPCPGQGP
Trigger: GGGCCCCTGTCCAGGACACGGAGCGGCGTTTCGCCCAGGGCAGCAGCCTGAGCTTTGCAGCTGTGGACCGGCTGCAGGACTCTGGCACCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000471863.5
ENST00000476760.1
ENST00000481273.5
ENST00000487673.5
CDS CCA 90 bp GAGTCCTGCAGCCGGTCCACAGCTGCAAAGCTCAGGCTGCTGCCCTaGGCGAAACGCCGCTCCGTGTCCTGGACAGGGGCCCCATCGAGC +
Preference number: 5 (lower is better)
Translates to: ESCSRSTAAKLRLLP*AKRRSVSWTGAPSS
Trigger: GCTCGATGGGGCCCCTGTCCAGGACACGGAGCGGCGTTTCGCCCAGGGCAGCAGCCTGAGCTTTGCAGCTGTGGACCGGCTGCAGGACTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000471863.5
ENST00000476760.1
ENST00000481273.5
ENST00000487673.5
CDS GCA 90 bp CGAAGCAGCGCCCGGCGCCCCTGCAGTGCATCCTGGGAGGACGGCTaGTTGATGAAGACAATGGCTGTCTGGGTACCGCCCAGCAGCGGC +
Preference number: 5 (lower is better)
Translates to: RSSARRPCSASWEDG*LMKTMAVWVPPSSG
Trigger: GCCGCTGCTGGGCGGTACCCAGACAGCCATTGTCTTCATCAAGCAGCCGTCCTCCCAGGATGCACTGCAGGGGCGCCGGGCGCTGCTTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000471863.5
ENST00000476760.1
ENST00000487673.5
CDS GCA 90 bp TGCCAGAGTCCTGCAGCCGGTCCACAGCTGCAAAGCTCAGGCTGCTaGCCTGGGCGAAACGCCGCTCCGTGTCCTGGACAGGGGCCCCAT +
Preference number: 5 (lower is better)
Translates to: CQSPAAGPQLQSSGC*PGRNAAPCPGQGPH
Trigger: ATGGGGCCCCTGTCCAGGACACGGAGCGGCGTTTCGCCCAGGGCAGCAGCCTGAGCTTTGCAGCTGTGGACCGGCTGCAGGACTCTGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000471863.5
ENST00000476760.1
ENST00000481273.5
ENST00000487673.5
CDS CCA 90 bp GCAAAGCTCAGGCTGCTGCCCTGGGCGAAACGCCGCTCCGTGTCCTaGACAGGGGCCCCATCGAGCAGCCAGTACACATGTACCGGGCCC +
Preference number: 5 (lower is better)
Translates to: AKLRLLPWAKRRSVS*TGAPSSSQYTCTGP
Trigger: GGGCCCGGTACATGTGTACTGGCTGCTCGATGGGGCCCCTGTCCAGGACACGGAGCGGCGTTTCGCCCAGGGCAGCAGCCTGAGCTTTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000471863.5
ENST00000476760.1
ENST00000481273.5
ENST00000487673.5
CDS-3UTR CAA 90 bp AGGCCCTGCTCAGACCTCAGCAATGCCTGTTGCACTAGGGCAGGGGCCTCAGGGGTGCTGTGGCGTTTGTaGGTGGCCGCGGGGCCGGAG +
Preference number: 5 (lower is better)
Translates to: RPCSDLSNACCTRAGASGVLWRL*VAAGPE
Trigger: CTCCGGCCCCGCGGCCACCAACAAACGCCACAGCAC...CCCTGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAGGTCTGAGCAGGGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
CDS GCA 90 bp CGAAGCAGCGCCCGGCGCCCCTGCAGTGCATCCTGGGAGGACGGCTaGTTGATGAAGACAATGGCTGTCTGGGTACCTGGGCCGACCCTG +
Preference number: 5 (lower is better)
Translates to: RSSARRPCSASWEDG*LMKTMAVWVPGPTL
Trigger: CAGGGTCGGCCCAGGTACCCAGACAGCCATTGTCTTCATCAAGCAGCCGTCCTCCCAGGATGCACTGCAGGGGCGCCGGGCGCTGCTTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481273.5
CDS-3UTR CAA 90 bp GTGCATCTTATCACTTGTGCTGTGGCGTTTGTTGGTGGCCGCGGGGCCGGAGCCGTGCTGTGGCGTTTGTaGGTGGCCGCGGGGCCGGAG +
Preference number: 5 (lower is better)
Translates to: VHLITCAVAFVGGRGAGAVLWRL*VAAGPE
Trigger: CTCCGGCCCCGCGGCCACCAACAAACGCCACAGCAC...GGCTCCGGCCCCGCGGCCACCAACAAACGCCACAGCACAAGTGATAAGATGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
CDS GCA 90 bp AGCCACACACTGGAAGGTGCCAGAGTCCTGCAGCCGGTCCACAGCTaGAAAGCTCAGGCTGCTGCCCTGGGCGAAACGCCGCTCCGTGTC +
Preference number: 5 (lower is better)
Translates to: SHTLEGARVLQPVHS*KAQAAALGETPLRV
Trigger: GACACGGAGCGGCGTTTCGCCCAGGGCAGCAGCCTGAGCTTTGCAGCTGTGGACCGGCTGCAGGACTCTGGCACCTTCCAGTGTGTGGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000471863.5
ENST00000476760.1
ENST00000481273.5
ENST00000487673.5
CDS-3UTR CAA 90 bp GGGGGACATCCAGCGCAGCGGCACCCAGGCCTGGCGGAAGTGGTAGTACTCACTCCCATCTCGGAACCATaGGTAGGTGGGCCGAGGGTG +
Preference number: 5 (lower is better)
Translates to: GGHPAQRHPGLAEVVVLTPISEP*VGGPRV
Trigger: CACCCTCGGCCCACCTACCAATGGTTCCGAGATGGG...AGTGAGTACTACCACTTCCGCCAGGCCTGGGTGCCGCTGCGCTGGATGTCCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230418.8
CDS-3UTR CAA 90 bp CCCTGCCCAGGCCATCCTGAGCGGGCTCCCTCCTCACGGCTTGCTGTCCACGGTTGCAAAGGCCCACCGTaGAGGCATTCCATCTCTGGC +
Preference number: 5 (lower is better)
Translates to: PCPGHPERAPSSRLAVHGCKGPP*RHSISG
Trigger: GCCAGAGATGGAATGCCTCAACGGTGGGCCTTTGCA...ACCGTGGACAGCAAGCCGTGAGGAGGGAGCCCGCTCAGGATGGCCTGGGCAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR CAA 90 bp GCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTCAGCCTCCCAAAGGGTGCTGTGGCGTTTGTaGGTGGCCGCGGGGCCGGAG +
Preference number: 5 (lower is better)
Translates to: AQLKALVAQFGSKSASQRVLWRL*VAAGPE
Trigger: CTCCGGCCCCGCGGCCACCAACAAACGCCACAGCAC...CCTTTGGGAGGCTGACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CAA 90 bp CTGCCACTCCCTCCTCCAAGCCCTGAGCCTTTGCCAGGAACACCTCCCCAAACTGTGCTGTGGCGTTTGTaGGTGGCCGCGGGGCCGGAG +
Preference number: 5 (lower is better)
Translates to: LPLPPPSPEPLPGTPPQTVLWRL*VAAGPE
Trigger: CTCCGGCCCCGCGGCCACCAACAAACGCCACAGCAC...AGTTTGGGGAGGTGTTCCTGGCAAAGGCTCAGGGCTTGGAGGAGGGAGTGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000470019.5
ENST00000497957.1
CDS-3UTR CAA 90 bp GGGCCGGAGCCCAAGCTGGTCAAGGCCACTTCTTCTTGGATCTCTGCTGAGGGCCTTGTGCTGTGGCGTTaGTTGGTGGCCGCGGGGCCG +
Preference number: 5 (lower is better)
Translates to: GPEPKLVKATSSWISAEGLVLWR*LVAAGP
Trigger: CGGCCCCGCGGCCACCAACAAACGCCACAGCACAAG...GCCCTCAGCAGAGATCCAAGAAGAAGTGGCCTTGACCAGCTTGGGCTCCGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
CDS-3UTR CAA 90 bp TCCCCTGCCCAGGCCATCCTGAGCGGGCTCCCTCCTCACGGCTTGCTGTCCACGATCCTCAGGAACTGCTaGAGGTCTCCCCAGCGTGGT +
Preference number: 5 (lower is better)
Translates to: SPAQAILSGLPPHGLLSTILRNC*RSPQRG
Trigger: ACCACGCTGGGGAGACCTCAAGCAGTTCCTGAGGAT...CGTGGACAGCAAGCCGTGAGGAGGGAGCCCGCTCAGGATGGCCTGGGCAGGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000461389.1
CDS-3UTR CAA 90 bp AGAGAAGTCACCCTCCAGGATGGCCTCGGGGGACATCCAGCGCAGCGGCACCCAGAGCTTTTCCAGCACTaGGACACGGGCTTGCGCCTC +
Preference number: 5 (lower is better)
Translates to: REVTLQDGLGGHPAQRHPELFQH*DTGLRL
Trigger: GAGGCGCAAGCCCGTGTCCAAGTGCTGGAAAAGCTC...TGGGTGCCGCTGCGCTGGATGTCCCCCGAGGCCATCCTGGAGGGTGACTTCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR CAA 90 bp TGTGCTGTGGCGTTTGTTGGTGGCCGCGGGGCCGGAGCCCAAGCTGGTCAAGGCTGCAAAGGCCCACCGTaGAGGCATTCCATCTCTGGC +
Preference number: 5 (lower is better)
Translates to: CAVAFVGGRGAGAQAGQGCKGPP*RHSISG
Trigger: GCCAGAGATGGAATGCCTCAACGGTGGGCCTTTGCA...GCCTTGACCAGCTTGGGCTCCGGCCCCGCGGCCACCAACAAACGCCACAGCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
CDS-3UTR CAA 90 bp CTCTGGGCACTGACCAGGCAGTTACGCGCAGCCAAGTCCTTATGCACAAAGCGGGTGCTGTGGCGTTTGTaGGTGGCCGCGGGGCCGGAG +
Preference number: 5 (lower is better)
Translates to: LWALTRQLRAAKSLCTKRVLWRL*VAAGPE
Trigger: CTCCGGCCCCGCGGCCACCAACAAACGCCACAGCAC...CCGCTTTGTGCATAAGGACTTGGCTGCGCGTAACTGCCTGGTCAGTGCCCAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
CDS-3UTR CAA 90 bp GAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGTGCTGTGGCGTTTGTaGGTGGCCGCGGGGCCGGAG +
Preference number: 5 (lower is better)
Translates to: EDVGLGQCAQAQSGEDSLVLWRL*VAAGPE
Trigger: CTCCGGCCCCGCGGCCACCAACAAACGCCACAGCAC...AAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CAA 90 bp ACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGCTTGTGCTGTGGCGTTaGTTGGTGGCCGCGGGGCCG +
Preference number: 5 (lower is better)
Translates to: TWVWVSVHKPRVGRTHLLLVLWR*LVAAGP
Trigger: CGGCCCCGCGGCCACCAACAAACGCCACAGCACAAG...CAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CAA 90 bp ACCTCCCCAAACTCACTCTTCCCCAGCGTGGTGATGGGCTGCAGGCTAGACCGTCTTGTGCTGTGGCGTTaGTTGGTGGCCGCGGGGCCG +
Preference number: 5 (lower is better)
Translates to: TSPNSLFPSVVMGCRLDRLVLWR*LVAAGP
Trigger: CGGCCCCGCGGCCACCAACAAACGCCACAGCACAAG...ACGGTCTAGCCTGCAGCCCATCACCACGCTGGGGAAGAGTGAGTTTGGGGAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
CDS-3UTR CAA 90 bp ATCTTATCACTTGTGCTGTGGCGTTTGTTGGTGGCCGCGGGGCCGGAGCCCAAGCTTGTGCTGTGGCGTTaGTTGGTGGCCGCGGGGCCG +
Preference number: 5 (lower is better)
Translates to: ILSLVLWRLLVAAGPEPKLVLWR*LVAAGP
Trigger: CGGCCCCGCGGCCACCAACAAACGCCACAGCACAAG...CTTGGGCTCCGGCCCCGCGGCCACCAACAAACGCCACAGCACAAGTGATAAGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
CDS-3UTR CAA 90 bp GCCATCCTGAGCGGGCTCCCTCCTCACGGCTTGCTGTCCACGGTGCTGTCTCCCTGCACAAAGCGGTTGTaGGACAGGTGCTCCATGCCC +
Preference number: 5 (lower is better)
Translates to: AILSGLPPHGLLSTVLSPCTKRL*DRCSMP
Trigger: GGGCATGGAGCACCTGTCCAACAACCGCTTTGTGCA...GGGAGACAGCACCGTGGACAGCAAGCCGTGAGGAGGGAGCCCGCTCAGGATGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
CDS-3UTR CAA 90 bp AGGCCCTGCTCAGACCTCAGCAATGCCTGTTGCACTAGGGCAGGGGCCTCAGGGAGGAGCCGCACCACGTaGGCGTGGTTCAGCTTCCCA +
Preference number: 5 (lower is better)
Translates to: RPCSDLSNACCTRAGASGRSRTT*AWFSFP
Trigger: TGGGAAGCTGAACCACGCCAACGTGGTGCGGCTCCT...CCCTGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAGGTCTGAGCAGGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS GCA 90 bp GCCTGGCCAAAAGCACTGTGGGCGCAGCAGGAATACAGCCCACTATaGTCAGGACCAGCTGGCCGGAGCGTCAGGTTCCGCTCCTTGCTG +
Preference number: 5 (lower is better)
Translates to: AWPKALWAQQEYSPL*SGPAGRSVRFRSLL
Trigger: CAGCAAGGAGCGGAACCTGACGCTCCGGCCAGCTGGTCCTGAGCATAGTGGGCTGTATTCCTGCTGCGCCCACAGTGCTTTTGGCCAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000471863.5
ENST00000481273.5
ENST00000487673.5
CDS GCA 90 bp GGAGGCTGCTCCCATCCAGCACTTGGACACGGGCTTGCGCCTCGATaGTGCCGGCTGGGGTGCTGCTCATACAACGGTACCATGTCCCAT +
Preference number: 5 (lower is better)
Translates to: GGCSHPALGHGLAPR*CRLGCCSYNGTMSH
Trigger: ATGGGACATGGTACCGTTGTATGAGCAGCACCCCAGCCGGCAGCATCGAGGCGCAAGCCCGTGTCCAAGTGCTGGATGGGAGCAGCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000345201.6
CDS CCA 90 bp TCAACCTCACAGCGAAGCAGCGCCCGGCGCCCCTGCAGTGCATCCTaGGAGGACGGCTGCTTGATGAAGACAATGGCTGTCTGGGTACCG +
Preference number: 5 (lower is better)
Translates to: STSQRSSARRPCSAS*EDGCLMKTMAVWVP
Trigger: CGGTACCCAGACAGCCATTGTCTTCATCAAGCAGCCGTCCTCCCAGGATGCACTGCAGGGGCGCCGGGCGCTGCTTCGCTGTGAGGTTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000471863.5
ENST00000476760.1
ENST00000487673.5
CDS-3UTR CAA 90 bp TGCTCAGACCTCAGCAATGCCTGTTGCACTAGGGCAGGGGCCTCAGGGCCCAGGCTCCAGCTGGCTGTCTaGGGGCTTCTTCAGCCAGGA +
Preference number: 5 (lower is better)
Translates to: CSDLSNACCTRAGASGPRLQLAV*GLLQPG
Trigger: TCCTGGCTGAAGAAGCCCCAAGACAGCCAGCTGGAG...CCTGGGCCCTGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAGGTCTGAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CAA 90 bp AGGCCCTGCTCAGACCTCAGCAATGCCTGTTGCACTAGGGCAGGGGCCTCAGGGCTCCAGCTGGCTGTCTaGGGGCTTCTTCAGCCAGGA +
Preference number: 5 (lower is better)
Translates to: RPCSDLSNACCTRAGASGLQLAV*GLLQPG
Trigger: TCCTGGCTGAAGAAGCCCCAAGACAGCCAGCTGGAG...CCCTGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAGGTCTGAGCAGGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CAA 90 bp GGCAGGGAAAACTGCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTCCACTTGGACACGGGCTaGCGCCTCGATGCTGCCGGC +
Preference number: 5 (lower is better)
Translates to: GRENCPAQSPSRPVWVQVHLDTG*RLDAAG
Trigger: GCCGGCAGCATCGAGGCGCAAGCCCGTGTCCAAGTG...GACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CAA 90 bp GGTGGCAGGGAAAACTGCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAACACTTGGACACGGGCTaGCGCCTCGATGCTGCCGGC +
Preference number: 5 (lower is better)
Translates to: GGRENCPAQSPSRPVWVQHLDTG*RLDAAG
Trigger: GCCGGCAGCATCGAGGCGCAAGCCCGTGTCCAAGTG...TTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CAA 90 bp CCTGCTCAGACCTCAGCAATGCCTGTTGCACTAGGGCAGGGGCCTCAGGGCCCAGGCACCGTGGCCTCCTaGTCAAACTCCATGCACTGC +
Preference number: 5 (lower is better)
Translates to: PAQTSAMPVALGQGPQGPGTVAS*SNSMHC
Trigger: GCAGTGCATGGAGTTTGACAAGGAGGCCACGGTGCC...TGGGCCCTGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAGGTCTGAGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CAA 90 bp AGGCCCTGCTCAGACCTCAGCAATGCCTGTTGCACTAGGGCAGGGGCCTCAGGGGGCACCGTGGCCTCCTaGTCAAACTCCATGCACTGC +
Preference number: 5 (lower is better)
Translates to: RPCSDLSNACCTRAGASGGTVAS*SNSMHC
Trigger: GCAGTGCATGGAGTTTGACAAGGAGGCCACGGTGCC...CCCTGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAGGTCTGAGCAGGGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CAA 90 bp CAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCGTGCTGTGGCGTTTGTaGGTGGCCGCGGGGCCGGAG +
Preference number: 5 (lower is better)
Translates to: QGSCPSCCELPSRDVLPCVLWRL*VAAGPE
Trigger: CTCCGGCCCCGCGGCCACCAACAAACGCCACAGCAC...GCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CAA 90 bp GTCCTTATGCACAAAGCGGTTGTTGGACAGGTGCTCCATGCCCAGGGCTACCTGGTGCTGTGGCGTTTGTaGGTGGCCGCGGGGCCGGAG +
Preference number: 5 (lower is better)
Translates to: VLMHKAVVGQVLHAQGYLVLWRL*VAAGPE
Trigger: CTCCGGCCCCGCGGCCACCAACAAACGCCACAGCAC...CAGGTAGCCCTGGGCATGGAGCACCTGTCCAACAACCGCTTTGTGCATAAGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
CDS-3UTR CAA 90 bp GGTGGCAGGGAAAACTGCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAACTTGTGCTGTGGCGTTaGTTGGTGGCCGCGGGGCCG +
Preference number: 5 (lower is better)
Translates to: GGRENCPAQSPSRPVWVQLVLWR*LVAAGP
Trigger: CGGCCCCGCGGCCACCAACAAACGCCACAGCACAAG...TTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CAA 90 bp GGCCCACCGTTGAGGCATTCCATCTCTGGCTCCTCGCCCTCGGGCTGCTTCTGCTGCACAAAGCGGTTGTaGGACAGGTGCTCCATGCCC +
Preference number: 5 (lower is better)
Translates to: GPPLRHSISGSSPSGCFCCTKRL*DRCSMP
Trigger: GGGCATGGAGCACCTGTCCAACAACCGCTTTGTGCA...GCAGAAGCAGCCCGAGGGCGAGGAGCCAGAGATGGAATGCCTCAACGGTGGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR CAA 90 bp GGGGGACATCCAGCGCAGCGGCACCCAGGCCTGGCGGAAGTGGTAGTACTCACTCTGTTGTACACATCCTaGCTGAGGCCCAGGGCAGAC +
Preference number: 5 (lower is better)
Translates to: GGHPAQRHPGLAEVVVLTLLYTS*LRPRAD
Trigger: GTCTGCCCTGGGCCTCAGCAAGGATGTGTACAACAG...AGTGAGTACTACCACTTCCGCCAGGCCTGGGTGCCGCTGCGCTGGATGTCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
CDS-3UTR CAA 90 bp GCAGCGCTGCATCAGCCGATAGAGTTTGGAAGGGCAGCCCTCGGGCTGAGGAAGCTCCCTCCTCACGGCTaGCTGTCCACGGTGCTGTCT +
Preference number: 5 (lower is better)
Translates to: AALHQPIEFGRAALGLRKLPPHG*LSTVLS
Trigger: AGACAGCACCGTGGACAGCAAGCCGTGAGGAGGGAG...CTTCCTCAGCCCGAGGGCTGCCCTTCCAAACTCTATCGGCTGATGCAGCGCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
CDS-3UTR CAA 90 bp GGGGGACATCCAGCGCAGCGGCACCCAGGCCTGGCGGAAGTGGTAGTACTCACTCCTCCCCAGGCAAAGTaGGCAGATGAGTGGCAGAGT +
Preference number: 5 (lower is better)
Translates to: GGHPAQRHPGLAEVVVLTPPQAK*ADEWQS
Trigger: ACTCTGCCACTCATCTGCCAACTTTGCCTGGGGAGG...AGTGAGTACTACCACTTCCGCCAGGCCTGGGTGCCGCTGCGCTGGATGTCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR CAA 90 bp TGCCCGTTCTGCAAAGGCCCACCGTTGAGGCATTCCATCTCTGGCTCCTCGCCCAGGAGCCGCACCACGTaGGCGTGGTTCAGCTTCCCA +
Preference number: 5 (lower is better)
Translates to: CPFCKGPPLRHSISGSSPRSRTT*AWFSFP
Trigger: TGGGAAGCTGAACCACGCCAACGTGGTGCGGCTCCT...GGGCGAGGAGCCAGAGATGGAATGCCTCAACGGTGGGCCTTTGCAGAACGGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470019.5
ENST00000497957.1
CDS TCA 90 bp GCCGGAGCCCAAGCTGGTCAAGGCCACTTCTTCTTGGATCTCTGCTaGGGGCTGCCCGTTCTGCAAAGGCCCACCTGGGAAGGAGGAGGA +
Preference number: 5 (lower is better)
Translates to: AGAQAGQGHFFLDLC*GLPVLQRPTWEGGG
Trigger: TCCTCCTCCTTCCCAGGTGGGCCTTTGCAGAACGGGCAGCCCTCAGCAGAGATCCAAGAAGAAGTGGCCTTGACCAGCTTGGGCTCCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461389.1
ENST00000473339.1
CDS GCA 90 bp GGTCTCCCCAGCGTGGTGATGGGCTGCAGGCTAGACCGTGGGAAGTaGATCTTATCACTTGTGCTGTGGCGTTTGTTGGTGGCCGCGGGG +
Preference number: 5 (lower is better)
Translates to: GLPSVVMGCRLDRGK*ILSLVLWRLLVAAG
Trigger: CCCCGCGGCCACCAACAAACGCCACAGCACAAGTGATAAGATGCACTTCCCACGGTCTAGCCTGCAGCCCATCACCACGCTGGGGAGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000461389.1
CDS GCA 90 bp GGCTGCTCCCATCCAGCACTTGGACACGGGCTTGCGCCTCGATGCTaGCGGCTGGGGTGCTGCTCATACAACGGTACCATGTCCCATCAT +
Preference number: 5 (lower is better)
Translates to: GCSHPALGHGLAPRC*RLGCCSYNGTMSHH
Trigger: ATGATGGGACATGGTACCGTTGTATGAGCAGCACCCCAGCCGGCAGCATCGAGGCGCAAGCCCGTGTCCAAGTGCTGGATGGGAGCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000345201.6
CDS CCA 90 bp TCAACCTCACAGCGAAGCAGCGCCCGGCGCCCCTGCAGTGCATCCTaGGAGGACGGCTGCTTGATGAAGACAATGGCTGTCTGGGTACCT +
Preference number: 5 (lower is better)
Translates to: STSQRSSARRPCSAS*EDGCLMKTMAVWVP
Trigger: AGGTACCCAGACAGCCATTGTCTTCATCAAGCAGCCGTCCTCCCAGGATGCACTGCAGGGGCGCCGGGCGCTGCTTCGCTGTGAGGTTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481273.5
CDS-3UTR CAA 90 bp ACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGCCCATCTCGGAACCATaGGTAGGTGGGCCGAGGGTG +
Preference number: 5 (lower is better)
Translates to: TWVWVSVHKPRVGRTHLLPISEP*VGGPRV
Trigger: CACCCTCGGCCCACCTACCAATGGTTCCGAGATGGG...CAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
CDS-3UTR CAA 90 bp GTGGGGAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCTCCAGCTGGCTGTCTaGGGGCTTCTTCAGCCAGGA +
Preference number: 5 (lower is better)
Translates to: VGKTWVWVSVHKPRVGRTLQLAV*GLLQPG
Trigger: TCCTGGCTGAAGAAGCCCCAAGACAGCCAGCTGGAG...AGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTCCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CAA 90 bp AGAGAAGTCACCCTCCAGGATGGCCTCGGGGGACATCCAGCGCAGCGGCACCCATACACCTCCACGCTGTaGATGCGCAAGGTCCCATTC +
Preference number: 5 (lower is better)
Translates to: REVTLQDGLGGHPAQRHPYTSTL*MRKVPF
Trigger: GAATGGGACCTTGCGCATCAACAGCGTGGAGGTGTA...TGGGTGCCGCTGCGCTGGATGTCCCCCGAGGCCATCCTGGAGGGTGACTTCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR CAA 90 bp ACCGAAGGCCCAGACATCAGACTTGGTAGAGAAGTCACCCTCCAGGATGGCCTCCACTTGGACACGGGCTaGCGCCTCGATGCTGCCGGC +
Preference number: 5 (lower is better)
Translates to: TEGPDIRLGREVTLQDGLHLDTG*RLDAAG
Trigger: GCCGGCAGCATCGAGGCGCAAGCCCGTGTCCAAGTG...GAGGCCATCCTGGAGGGTGACTTCTCTACCAAGTCTGATGTCTGGGCCTTCGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR CAA 90 bp AGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCCCACTTGGACACGGGCTaGCGCCTCGATGCTGCCGGC +
Preference number: 5 (lower is better)
Translates to: RDLAHHAVSFPLEMSSPAHLDTG*RLDAAG
Trigger: GCCGGCAGCATCGAGGCGCAAGCCCGTGTCCAAGTG...GGCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CAA 90 bp GAGGTGGCAGGGAAAACTGCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCTGCAGGGTCCCAGCGTaGTCTGTCACCCACTCTGGG +
Preference number: 5 (lower is better)
Translates to: EVAGKTAQLKALVAQFGSCRVPA*SVTHSG
Trigger: CCCAGAGTGGGTGACAGACAACGCTGGGACCCTGCA...GGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCCACCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CAA 90 bp CAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCGTGCTGTGGCGTTTGTaGGTGGCCGCGGGGCCGGAG +
Preference number: 5 (lower is better)
Translates to: QEDRDLAHHAVSFPLEMSVLWRL*VAAGPE
Trigger: CTCCGGCCCCGCGGCCACCAACAAACGCCACAGCAC...GGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CAA 90 bp AGGCCCTGCTCAGACCTCAGCAATGCCTGTTGCACTAGGGCAGGGGCCTCAGGGATCCTCAGGAACTGCTaGAGGTCTCCCCAGCGTGGT +
Preference number: 5 (lower is better)
Translates to: RPCSDLSNACCTRAGASGILRNC*RSPQRG
Trigger: ACCACGCTGGGGAGACCTCAAGCAGTTCCTGAGGAT...CCCTGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAGGTCTGAGCAGGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000461389.1
CDS-3UTR CAA 90 bp TGCTCAGACCTCAGCAATGCCTGTTGCACTAGGGCAGGGGCCTCAGGGCCCAGGCTGTTGTACACATCCTaGCTGAGGCCCAGGGCAGAC +
Preference number: 5 (lower is better)
Translates to: CSDLSNACCTRAGASGPRLLYTS*LRPRAD
Trigger: GTCTGCCCTGGGCCTCAGCAAGGATGTGTACAACAG...CCTGGGCCCTGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAGGTCTGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CAA 90 bp GCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTCAGCCTCCCAAAGGCTCCCTCCTCACGGCTaGCTGTCCACGGTGCTGTCT +
Preference number: 5 (lower is better)
Translates to: AQLKALVAQFGSKSASQRLPPHG*LSTVLS
Trigger: AGACAGCACCGTGGACAGCAAGCCGTGAGGAGGGAG...CCTTTGGGAGGCTGACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CAA 90 bp ACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGCTCCCTCCTCACGGCTaGCTGTCCACGGTGCTGTCT +
Preference number: 5 (lower is better)
Translates to: TWVWVSVHKPRVGRTHLLLPPHG*LSTVLS
Trigger: AGACAGCACCGTGGACAGCAAGCCGTGAGGAGGGAG...CAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CAA 90 bp GGAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTCTCCCTCCTCACGGCTaGCTGTCCACGGTGCTGTCT +
Preference number: 5 (lower is better)
Translates to: GRRGSGSVCTSPEWGGLTLPPHG*LSTVLS
Trigger: AGACAGCACCGTGGACAGCAAGCCGTGAGGAGGGAG...AGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CAA 90 bp CCTGCTCAGACCTCAGCAATGCCTGTTGCACTAGGGCAGGGGCCTCAGGGCCCACCTCCCCAGGCAAAGTaGGCAGATGAGTGGCAGAGT +
Preference number: 5 (lower is better)
Translates to: PAQTSAMPVALGQGPQGPPPQAK*ADEWQS
Trigger: ACTCTGCCACTCATCTGCCAACTTTGCCTGGGGAGG...TGGGCCCTGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAGGTCTGAGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CAA 90 bp ATCACTTGTGCTGTGGCGTTTGTTGGTGGCCGCGGGGCCGGAGCCCAAGCTGGTCCTCCCCAGGCAAAGTaGGCAGATGAGTGGCAGAGT +
Preference number: 5 (lower is better)
Translates to: ITCAVAFVGGRGAGAQAGPPQAK*ADEWQS
Trigger: ACTCTGCCACTCATCTGCCAACTTTGCCTGGGGAGG...ACCAGCTTGGGCTCCGGCCCCGCGGCCACCAACAAACGCCACAGCACAAGTGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR CAA 90 bp CCCGTTCTGCAAAGGCCCACCGTTGAGGCATTCCATCTCTGGCTCCTCGCCCTCCCAAGCCCTGAGCCTTaGCCAGGAACACCTCCCCAA +
Preference number: 5 (lower is better)
Translates to: PVLQRPTVEAFHLWLLALPSPEP*PGTPPQ
Trigger: TTGGGGAGGTGTTCCTGGCAAAGGCTCAGGGCTTGG...GAGGGCGAGGAGCCAGAGATGGAATGCCTCAACGGTGGGCCTTTGCAGAACGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
CDS-3UTR CAA 90 bp TGCCAGGGCCCTCCGACTCCTCCGGCACAGGCTTGTCTGAGAGACACACAGATGCCAAGCCCTGAGCCTTaGCCAGGAACACCTCCCCAA +
Preference number: 5 (lower is better)
Translates to: CQGPPTPPAQACLRDTQMPSPEP*PGTPPQ
Trigger: TTGGGGAGGTGTTCCTGGCAAAGGCTCAGGGCTTGG...CATCTGTGTGTCTCTCAGACAAGCCTGTGCCGGAGGAGTCGGAGGGCCCTGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494146.5
CDS-3UTR CAA 90 bp GAGGTGGCAGGGAAAACTGCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAGGAGCCGCACCACGTaGGCGTGGTTCAGCTTCCCA +
Preference number: 5 (lower is better)
Translates to: EVAGKTAQLKALVAQFGSRSRTT*AWFSFP
Trigger: TGGGAAGCTGAACCACGCCAACGTGGTGCGGCTCCT...GGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCCACCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CAA 90 bp AGGCCCTGCTCAGACCTCAGCAATGCCTGTTGCACTAGGGCAGGGGCCTCAGGGGGGAGGCTGCTCCCATaGGCCACAGTGATGTTGACA +
Preference number: 5 (lower is better)
Translates to: RPCSDLSNACCTRAGASGGRLLP*ATVMLT
Trigger: TGTCAACATCACTGTGGCCAATGGGAGCAGCCTCCC...CCCTGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAGGTCTGAGCAGGGCCT
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000349241.6
CDS-3UTR CAA 90 bp CCTCGGGGGACATCCAGCGCAGCGGCACCCAGGCCTGGCGGAAGTGGTAGTACTTCCACTCTTGCCAACTaGGGTCCAATCACAGTGCTC +
Preference number: 5 (lower is better)
Translates to: PRGTSSAAAPRPGGSGSTSTLAN*GPITVL
Trigger: GAGCACTGTGATTGGACCCAAGTTGGCAAGAGTGGA...AGTACTACCACTTCCGCCAGGCCTGGGTGCCGCTGCGCTGGATGTCCCCCGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461389.1
CDS-3UTR CAA 90 bp GCCATCCTGAGCGGGCTCCCTCCTCACGGCTTGCTGTCCACGGTGCTGTCTCCCCCTGGTCTTCCACTCTaGCCAACTTGGGTCCAATCA +
Preference number: 5 (lower is better)
Translates to: AILSGLPPHGLLSTVLSPPGLPL*PTWVQS
Trigger: TGATTGGACCCAAGTTGGCAAGAGTGGAAGACCAGG...GGGAGACAGCACCGTGGACAGCAAGCCGTGAGGAGGGAGCCCGCTCAGGATGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461389.1
CDS CCA 90 bp ACTGTGGGCGCAGCAGGAATACAGCCCACTATGCTCAGGACCAGCTaGCCGGAGCGTCAGGTTCCGCTCCTTGCTGCTGACTGTGTGGTT +
Preference number: 5 (lower is better)
Translates to: TVGAAGIQPTMLRTS*PERQVPLLAADCVV
Trigger: AACCACACAGTCAGCAGCAAGGAGCGGAACCTGACGCTCCGGCCAGCTGGTCCTGAGCATAGTGGGCTGTATTCCTGCTGCGCCCACAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000471863.5
ENST00000481273.5
ENST00000487673.5
CDS CCA 90 bp CCCATCCAGCACTTGGACACGGGCTTGCGCCTCGATGCTGCCGGCTaGGGTGCTGCTCATACAACGGTACCATGTCCCATCATACACCTC +
Preference number: 5 (lower is better)
Translates to: PIQHLDTGLRLDAAG*GAAHTTVPCPIIHL
Trigger: GAGGTGTATGATGGGACATGGTACCGTTGTATGAGCAGCACCCCAGCCGGCAGCATCGAGGCGCAAGCCCGTGTCCAAGTGCTGGATGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345201.6
CDS CCA 90 bp CCTGAGCCTTTGCCAGGAACACCTCCCCAAACTCACTCTTCCCTGTaGGTACAGTCTGAGTCAGCCAGCCACCTTCACCCAGGCCGAGGC +
Preference number: 5 (lower is better)
Translates to: PEPLPGTPPQTHSSL*VQSESASHLHPGRG
Trigger: GCCTCGGCCTGGGTGAAGGTGGCTGGCTGACTCAGACTGTACCCACAGGGAAGAGTGAGTTTGGGGAGGTGTTCCTGGCAAAGGCTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493339.1
CDS-3UTR CAA 90 bp CCTCGGGGGACATCCAGCGCAGCGGCACCCAGGCCTGGCGGAAGTGGTAGTACTCCTGCCTCAATCCATTaGATGTTGAAGGAGGCGTTG +
Preference number: 5 (lower is better)
Translates to: PRGTSSAAAPRPGGSGSTPASIH*MLKEAL
Trigger: CAACGCCTCCTTCAACATCAAATGGATTGAGGCAGG...AGTACTACCACTTCCGCCAGGCCTGGGTGCCGCTGCGCTGGATGTCCCCCGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR CAA 90 bp GTGGGGAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTGTCAGGTTCCGCTCCTaGCTGCTGACTGTGTGGTTG +
Preference number: 5 (lower is better)
Translates to: VGKTWVWVSVHKPRVGRTVRFRS*LLTVWL
Trigger: CAACCACACAGTCAGCAGCAAGGAGCGGAACCTGAC...AGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTCCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
CDS-3UTR CAA 90 bp TGGGGTCCAGGATGCGGTCCTTGCCTTTCCACTGAATCAGCGGCTTGGGGTCCCAGCAGCAGAGACCCGTaGGCAAACACTGTGGCTCTG +
Preference number: 5 (lower is better)
Translates to: WGPGCGPCLSTESAAWGPSSRDP*ANTVAL
Trigger: CAGAGCCACAGTGTTTGCCAACGGGTCTCTGCTGCT...GGGACCCCAAGCCGCTGATTCAGTGGAAAGGCAAGGACCGCATCCTGGACCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR CAA 90 bp CCAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCACTTGGACACGGGCTaGCGCCTCGATGCTGCCGGC +
Preference number: 5 (lower is better)
Translates to: PGGQGSCPSCCELPSRDVHLDTG*RLDAAG
Trigger: GCCGGCAGCATCGAGGCGCAAGCCCGTGTCCAAGTG...GACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CAA 90 bp GAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTTGCAGGGTCCCAGCGTaGTCTGTCACCCACTCTGGG +
Preference number: 5 (lower is better)
Translates to: EDVGLGQCAQAQSGEDSLCRVPA*SVTHSG
Trigger: CCCAGAGTGGGTGACAGACAACGCTGGGACCCTGCA...AAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CAA 90 bp GCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTCAGCCTCCCAAAGGGGGGCCTCCGTGTGCTaGATGTTGCAGCTGTTGCCT +
Preference number: 5 (lower is better)
Translates to: AQLKALVAQFGSKSASQRGASVC*MLQLLP
Trigger: AGGCAACAGCTGCAACATCAAGCACACGGAGGCCCC...CCTTTGGGAGGCTGACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000470019.5
CDS-3UTR CAA 90 bp ATGCCCACCCACCCCACGCTGCAATTACATATAAAAGCCGCCCGTGGTGCATACCTTGTGCTGTGGCGTTaGTTGGTGGCCGCGGGGCCG +
Preference number: 5 (lower is better)
Translates to: MPTHPTLQLHIKAARGAYLVLWR*LVAAGP
Trigger: CGGCCCCGCGGCCACCAACAAACGCCACAGCACAAG...GTATGCACCACGGGCGGCTTTTATATGTAATTGCAGCGTGGGGTGGGTGGGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CAA 90 bp CCAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTTGTGCTGTGGCGTTaGTTGGTGGCCGCGGGGCCG +
Preference number: 5 (lower is better)
Translates to: PGGQGSCPSCCELPSRDVLVLWR*LVAAGP
Trigger: CGGCCCCGCGGCCACCAACAAACGCCACAGCACAAG...GACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CAA 90 bp GGCAGGGAAAACTGCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTCCTCCCTCCTCACGGCTaGCTGTCCACGGTGCTGTCT +
Preference number: 5 (lower is better)
Translates to: GRENCPAQSPSRPVWVQVLPPHG*LSTVLS
Trigger: AGACAGCACCGTGGACAGCAAGCCGTGAGGAGGGAG...GACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CAA 90 bp GGAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTCCAAGCCCTGAGCCTTaGCCAGGAACACCTCGAACC +
Preference number: 5 (lower is better)
Translates to: GRRGSGSVCTSPEWGGLTPSPEP*PGTPRT
Trigger: GGTTCGAGGTGTTCCTGGCAAAGGCTCAGGGCTTGG...AGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489707.5
CDS CCA 90 bp CCGAGGGTGCCCATCAATGTGGCAACGAAGTGTGACCTGGGTCTGTaGCTGGATCTCAGCTTCCGAGGCTGGATGCTTCAGGACCACAGG +
Preference number: 5 (lower is better)
Translates to: PRVPINVATKCDLGL*LDLSFRGWMLQDHR
Trigger: CCTGTGGTCCTGAAGCATCCAGCCTCGGAAGCTGAGATCCAGCCACAGACCCAGGTCACACTTCGTTGCCACATTGATGGGCACCCTCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000471863.5
ENST00000481273.5
ENST00000487673.5
CDS CCA 90 bp TGGCAATGGAACATGGCCTCCTCATACCTCGCTACTACCACGTCCTaGGGTGCCAGCACCACCCTGGCAAAGCTTTCATCGAGGGTGCCC +
Preference number: 5 (lower is better)
Translates to: WQWNMASSYLATTTS*GASTTLAKLSSRVP
Trigger: GGGCACCCTCGATGAAAGCTTTGCCAGGGTGGTGCTGGCACCCCAGGACGTGGTAGTAGCGAGGTATGAGGAGGCCATGTTCCATTGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR CAA 90 bp GGAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTGTCAGGTTCCGCTCCTaGCTGCTGACTGTGTGGTTG +
Preference number: 5 (lower is better)
Translates to: GRRGSGSVCTSPEWGGLTVRFRS*LLTVWL
Trigger: CAACCACACAGTCAGCAGCAAGGAGCGGAACCTGAC...AGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
CDS-3UTR CAA 90 bp ACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGGTCAGGTTCCGCTCCTaGCTGCTGACTGTGTGGTTG +
Preference number: 5 (lower is better)
Translates to: TWVWVSVHKPRVGRTHLLVRFRS*LLTVWL
Trigger: CAACCACACAGTCAGCAGCAAGGAGCGGAACCTGAC...CAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
CDS-3UTR CAA 90 bp GCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTCAGCCTCCCAAAGGGTCAGGTTCCGCTCCTaGCTGCTGACTGTGTGGTTG +
Preference number: 5 (lower is better)
Translates to: AQLKALVAQFGSKSASQRVRFRS*LLTVWL
Trigger: CAACCACACAGTCAGCAGCAAGGAGCGGAACCTGAC...CCTTTGGGAGGCTGACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
CDS-3UTR CAA 90 bp ACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGAGCAGCAGAGACCCGTaGGCAAACACTGTGGCTCTG +
Preference number: 5 (lower is better)
Translates to: TWVWVSVHKPRVGRTHLLSSRDP*ANTVAL
Trigger: CAGAGCCACAGTGTTTGCCAACGGGTCTCTGCTGCT...CAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CAA 90 bp CTCATCCTTGCTCTGCAGGCTCTTCACAAGTACCAGGGTCTCTGCCACTCCCTCTGCAGGGTCCCAGCGTaGTCTGTCACCCACTCTGGG +
Preference number: 5 (lower is better)
Translates to: LILALQALHKYQGLCHSLCRVPA*SVTHSG
Trigger: CCCAGAGTGGGTGACAGACAACGCTGGGACCCTGCA...GAGGGAGTGGCAGAGACCCTGGTACTTGTGAAGAGCCTGCAGAGCAAGGATGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR CAA 90 bp ACGGTGCTGTCTCCCAGGGCGCTGGCAATCTCACTGAAGGAGGGCCGGTCCTTGTCCGTGTGCTTGATGTaGCAGCTGTTGCCTGCAATG +
Preference number: 5 (lower is better)
Translates to: TVLSPRALAISLKEGRSLSVCLM*QLLPAM
Trigger: CATTGCAGGCAACAGCTGCAACATCAAGCACACGGA...CAAGGACCGGCCCTCCTTCAGTGAGATTGCCAGCGCCCTGGGAGACAGCACCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR CAA 90 bp TCTTGGATCTCTGCTGAGGGCTGCCCGTTCTGCAAAGGCCCACCGTTGAGGCATGGGGCCTCCGTGTGCTaGATGTTGCAGCTGTTGCCT +
Preference number: 5 (lower is better)
Translates to: SWISAEGCPFCKGPPLRHGASVC*MLQLLP
Trigger: AGGCAACAGCTGCAACATCAAGCACACGGAGGCCCC...ATGCCTCAACGGTGGGCCTTTGCAGAACGGGCAGCCCTCAGCAGAGATCCAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR CAA 90 bp ACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGCAAAGGCCCACCGTaGAGGCATTCCATCTCTGGC +
Preference number: 5 (lower is better)
Translates to: TWVWVSVHKPRVGRTHLLCKGPP*RHSISG
Trigger: GCCAGAGATGGAATGCCTCAACGGTGGGCCTTTGCA...CAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CAA 90 bp ACCTCCCCAAACTCACTCTTCCCCAGCGTGGTGATGGGCTGCAGGCTAGACCGTTGCAAAGGCCCACCGTaGAGGCATTCCATCTCTGGC +
Preference number: 5 (lower is better)
Translates to: TSPNSLFPSVVMGCRLDRCKGPP*RHSISG
Trigger: GCCAGAGATGGAATGCCTCAACGGTGGGCCTTTGCA...ACGGTCTAGCCTGCAGCCCATCACCACGCTGGGGAAGAGTGAGTTTGGGGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
CDS-3UTR CAA 90 bp AGGCTAGACCGTGGGAAGTGCATCTTATCACTTGTGCTGTGGCGTTTGTTGGTGGTGCTGTGGCGTTTGTaGGTGGCCGCGGGGCCGGAG +
Preference number: 5 (lower is better)
Translates to: RLDRGKCILSLVLWRLLVVLWRL*VAAGPE
Trigger: CTCCGGCCCCGCGGCCACCAACAAACGCCACAGCAC...CACCAACAAACGCCACAGCACAAGTGATAAGATGCACTTCCCACGGTCTAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
CDS-3UTR CAA 90 bp CAGATGAGTGGCAGAGTTGGACCCGGTCAAGGGGAGAAGTTGAAGGCCAGAAATCTTGTGCTGTGGCGTTaGTTGGTGGCCGCGGGGCCG +
Preference number: 5 (lower is better)
Translates to: QMSGRVGPGQGEKLKARNLVLWR*LVAAGP
Trigger: CGGCCCCGCGGCCACCAACAAACGCCACAGCACAAG...ATTTCTGGCCTTCAACTTCTCCCCTTGACCGGGTCCAACTCTGCCACTCATCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CAA 90 bp AGCCTAGCCCTCCCCAGGCAAAGTTGGCAGATGAGTGGCAGAGTTGGACCCGGTTGCACAAAGCGGTTGTaGGACAGGTGCTCCATGCCC +
Preference number: 5 (lower is better)
Translates to: SLALPRQSWQMSGRVGPGCTKRL*DRCSMP
Trigger: GGGCATGGAGCACCTGTCCAACAACCGCTTTGTGCA...ACCGGGTCCAACTCTGCCACTCATCTGCCAACTTTGCCTGGGGAGGGCTAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CAA 90 bp AGAGAAGTCACCCTCCAGGATGGCCTCGGGGGACATCCAGCGCAGCGGCACCCATTATGCACAAAGCGGTaGTTGGACAGGTGCTCCATG +
Preference number: 5 (lower is better)
Translates to: REVTLQDGLGGHPAQRHPLCTKR*LDRCSM
Trigger: CATGGAGCACCTGTCCAACAACCGCTTTGTGCATAA...TGGGTGCCGCTGCGCTGGATGTCCCCCGAGGCCATCCTGGAGGGTGACTTCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
CDS-3UTR CAA 90 bp CCAAACTCACTCTTCCCCAGCGTGGTGATGGGCTGCAGGCTAGACCGTGGGAAGCTGTTGTACACATCCTaGCTGAGGCCCAGGGCAGAC +
Preference number: 5 (lower is better)
Translates to: PNSLFPSVVMGCRLDRGKLLYTS*LRPRAD
Trigger: GTCTGCCCTGGGCCTCAGCAAGGATGTGTACAACAG...CTTCCCACGGTCTAGCCTGCAGCCCATCACCACGCTGGGGAAGAGTGAGTTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR CAA 90 bp TTCCCAGCCTGCAAATCTGCCAGTACTTCATCATCTGCCTGCCCACCATGGGGCCTCCCTCCTCACGGCTaGCTGTCCACGGTGCTGTCT +
Preference number: 5 (lower is better)
Translates to: FPACKSASTSSSACPPWGLPPHG*LSTVLS
Trigger: AGACAGCACCGTGGACAGCAAGCCGTGAGGAGGGAG...GCCCCATGGTGGGCAGGCAGATGATGAAGTACTGGCAGATTTGCAGGCTGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
CDS-3UTR CAA 90 bp AGGCCACTTCTTCTTGGATCTCTGCTGAGGGCTGCCCGTTCTGCAAAGGCCCACCCAAGCCCTGAGCCTTaGCCAGGAACACCTCCCCAA +
Preference number: 5 (lower is better)
Translates to: RPLLLGSLLRAARSAKAHPSPEP*PGTPPQ
Trigger: TTGGGGAGGTGTTCCTGGCAAAGGCTCAGGGCTTGG...GTGGGCCTTTGCAGAACGGGCAGCCCTCAGCAGAGATCCAAGAAGAAGTGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
CDS-3UTR CAA 90 bp TCTTGGATCTCTGCTGAGGGCTGCCCGTTCTGCAAAGGCCCACCGTTGAGGCATCCAAGCCCTGAGCCTTaGCCAGGAACACCTCCCCAA +
Preference number: 5 (lower is better)
Translates to: SWISAEGCPFCKGPPLRHPSPEP*PGTPPQ
Trigger: TTGGGGAGGTGTTCCTGGCAAAGGCTCAGGGCTTGG...ATGCCTCAACGGTGGGCCTTTGCAGAACGGGCAGCCCTCAGCAGAGATCCAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
CDS-3UTR CAA 90 bp GTGGGGAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTTGCTGCTGCTCATCCTaGCTCTGCAGGCTCTTCACA +
Preference number: 5 (lower is better)
Translates to: VGKTWVWVSVHKPRVGRTCCCSS*LCRLFT
Trigger: TGTGAAGAGCCTGCAGAGCAAGGATGAGCAGCAGCA...AGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTCCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CAA 90 bp AGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCCAGGAGCCGCACCACGTaGGCGTGGTTCAGCTTCCCA +
Preference number: 5 (lower is better)
Translates to: RDLAHHAVSFPLEMSSPARSRTT*AWFSFP
Trigger: TGGGAAGCTGAACCACGCCAACGTGGTGCGGCTCCT...GGCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR CAA 90 bp CAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCAGGAGCCGCACCACGTaGGCGTGGTTCAGCTTCCCA +
Preference number: 5 (lower is better)
Translates to: QGSCPSCCELPSRDVLPCRSRTT*AWFSFP
Trigger: TGGGAAGCTGAACCACGCCAACGTGGTGCGGCTCCT...GCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR CAA 90 bp CAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTCAGCCTCCCAAAGGATGAGGAGCCGCACCACGTaGGCGTGGTTCAGCTTCCCA +
Preference number: 5 (lower is better)
Translates to: QLKALVAQFGSKSASQRMRSRTT*AWFSFP
Trigger: TGGGAAGCTGAACCACGCCAACGTGGTGCGGCTCCT...CATCCTTTGGGAGGCTGACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CAA 90 bp GCCCAGCACGGCAATGATGTAGGCCACAGCGGCACCCACCGACAACCCAATGGTTCCTCCGGCACAGGCTaGTCTGAGAGACACACAGAT +
Preference number: 5 (lower is better)
Translates to: AQHGNDVGHSGTHRQPNGSSGTG*SERHTD
Trigger: ATCTGTGTGTCTCTCAGACAAGCCTGTGCCGGAGGA...ACCATTGGGTTGTCGGTGGGTGCCGCTGTGGCCTACATCATTGCCGTGCTGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494146.5
CDS TCA 90 bp ATTGGTAGGTGGGCCGAGGGTGCCCATCAATGTGGCAACGAAGTGTaGCCTGGGTCTGTGGCTGGATCTCAGCTTCCGAGGCTGGATGCT +
Preference number: 5 (lower is better)
Translates to: IGRWAEGAHQCGNEV*PGSVAGSQLPRLDA
Trigger: AGCATCCAGCCTCGGAAGCTGAGATCCAGCCACAGACCCAGGTCACACTTCGTTGCCACATTGATGGGCACCCTCGGCCCACCTACCAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000471863.5
ENST00000481273.5
ENST00000487673.5
CDS TCA 90 bp AGGCCCACCTGGGAAGGAGGAGGACAAGAGCGTCACGATGAGACCTaGCACTCTGGCCACCATGGGGATTTCTGTTCTGTCCCCTGGTCT +
Preference number: 5 (lower is better)
Translates to: RPTWEGGGQERHDET*HSGHHGDFCSVPWS
Trigger: AGACCAGGGGACAGAACAGAAATCCCCATGGTGGCCAGAGTGTCAGGTCTCATCGTGACGCTCTTGTCCTCCTCCTTCCCAGGTGGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461389.1
ENST00000473339.1
CDS GCA 90 bp GTCAAGGCCACTTCTTCTTGGATCTCTGCTGAGGGCTGCCCGTTCTaGAAAGGCCCACCTGGGAAGGAGGAGGACAAGAGCGTCACGATG +
Preference number: 5 (lower is better)
Translates to: VKATSSWISAEGCPF*KGPPGKEEDKSVTM
Trigger: CATCGTGACGCTCTTGTCCTCCTCCTTCCCAGGTGGGCCTTTGCAGAACGGGCAGCCCTCAGCAGAGATCCAAGAAGAAGTGGCCTTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461389.1
ENST00000473339.1
CDS GCA 90 bp AACATACCCAGCGTGGTGATGGGCTGCAGGCTAGACCGTGGGAAGTaGATCTTATCACTTGTGCTGTGGCGTTTGTTGGTGGCCGCGGGG +
Preference number: 5 (lower is better)
Translates to: NIPSVVMGCRLDRGK*ILSLVLWRLLVAAG
Trigger: CCCCGCGGCCACCAACAAACGCCACAGCACAAGTGATAAGATGCACTTCCCACGGTCTAGCCTGCAGCCCATCACCACGCTGGGTATGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493339.1
CDS CCA 90 bp GGGTGCCCATCAATGTGGCAACGAAGTGTGACCTGGGTCTGTGGCTaGATCTCAGCTTCCGAGGCTGGATGCTTCAGGACCACAGGACCT +
Preference number: 5 (lower is better)
Translates to: GCPSMWQRSVTWVCG*ISASEAGCFRTTGP
Trigger: AGGTCCTGTGGTCCTGAAGCATCCAGCCTCGGAAGCTGAGATCCAGCCACAGACCCAGGTCACACTTCGTTGCCACATTGATGGGCACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000471863.5
ENST00000481273.5
ENST00000487673.5
CDS CCA 90 bp TCGAGGGTGCCCATCAATGTGGCAACGAAGTGTGACCTGGGTCTGTaGCTGGATCTCAGCTTCCGAGGCTGGATGCTTCAGGACCACAGG +
Preference number: 5 (lower is better)
Translates to: SRVPINVATKCDLGL*LDLSFRGWMLQDHR
Trigger: CCTGTGGTCCTGAAGCATCCAGCCTCGGAAGCTGAGATCCAGCCACAGACCCAGGTCACACTTCGTTGCCACATTGATGGGCACCCTCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR CAA 90 bp AGCCTAGCCCTCCCCAGGCAAAGTTGGCAGATGAGTGGCAGAGTTGGACCCGGTATGTTGAAGGAGGCGTaGGCACTGCGGGCTTCTTCT +
Preference number: 5 (lower is better)
Translates to: SLALPRQSWQMSGRVGPGMLKEA*ALRASS
Trigger: AGAAGAAGCCCGCAGTGCCAACGCCTCCTTCAACAT...ACCGGGTCCAACTCTGCCACTCATCTGCCAACTTTGCCTGGGGAGGGCTAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CAA 90 bp CCAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCCCATCTCGGAACCATaGGTAGGTGGGCCGAGGGTG +
Preference number: 5 (lower is better)
Translates to: PGGQGSCPSCCELPSRDVPISEP*VGGPRV
Trigger: CACCCTCGGCCCACCTACCAATGGTTCCGAGATGGG...GACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000481273.5
CDS-3UTR CAA 90 bp GAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTAGCAGCAGAGACCCGTaGGCAAACACTGTGGCTCTG +
Preference number: 5 (lower is better)
Translates to: EDVGLGQCAQAQSGEDSLSSRDP*ANTVAL
Trigger: CAGAGCCACAGTGTTTGCCAACGGGTCTCTGCTGCT...AAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CAA 90 bp CAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCCTCCAGCTGGCTGTCTaGGGGCTTCTTCAGCCAGGA +
Preference number: 5 (lower is better)
Translates to: QGSCPSCCELPSRDVLPCLQLAV*GLLQPG
Trigger: TCCTGGCTGAAGAAGCCCCAAGACAGCCAGCTGGAG...GCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR CAA 90 bp GCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTCAGCCTCCCAAAGGTACACCTCCACGCTGTaGATGCGCAAGGTCCCATTC +
Preference number: 5 (lower is better)
Translates to: AQLKALVAQFGSKSASQRYTSTL*MRKVPF
Trigger: GAATGGGACCTTGCGCATCAACAGCGTGGAGGTGTA...CCTTTGGGAGGCTGACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CAA 90 bp ACTTCTTCTTGGATCTCTGCTGAGGGCTGCCCGTTCTGCAAAGGCCCACCGTTGGGCACCGTGGCCTCCTaGTCAAACTCCATGCACTGC +
Preference number: 5 (lower is better)
Translates to: TSSWISAEGCPFCKGPPLGTVAS*SNSMHC
Trigger: GCAGTGCATGGAGTTTGACAAGGAGGCCACGGTGCC...CAACGGTGGGCCTTTGCAGAACGGGCAGCCCTCAGCAGAGATCCAAGAAGAAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR CAA 90 bp AGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCCGGCACCGTGGCCTCCTaGTCAAACTCCATGCACTGC +
Preference number: 5 (lower is better)
Translates to: RDLAHHAVSFPLEMSSPAGTVAS*SNSMHC
Trigger: GCAGTGCATGGAGTTTGACAAGGAGGCCACGGTGCC...GGCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CAA 90 bp GAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCTGCAGGGTCCCAGCGTaGTCTGTCACCCACTCTGGG +
Preference number: 5 (lower is better)
Translates to: EDRDLAHHAVSFPLEMSSCRVPA*SVTHSG
Trigger: CCCAGAGTGGGTGACAGACAACGCTGGGACCCTGCA...GGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CAA 90 bp ACGCGCAGCCAAGTCCTTATGCACAAAGCGGTTGTTGGACAGGTGCTCCATGCCGGGGCCTCCGTGTGCTaGATGTTGCAGCTGTTGCCT +
Preference number: 5 (lower is better)
Translates to: TRSQVLMHKAVVGQVLHAGASVC*MLQLLP
Trigger: AGGCAACAGCTGCAACATCAAGCACACGGAGGCCCC...GGCATGGAGCACCTGTCCAACAACCGCTTTGTGCATAAGGACTTGGCTGCGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR CAA 90 bp GAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTTGCAAAGGCCCACCGTaGAGGCATTCCATCTCTGGC +
Preference number: 5 (lower is better)
Translates to: EDVGLGQCAQAQSGEDSLCKGPP*RHSISG
Trigger: GCCAGAGATGGAATGCCTCAACGGTGGGCCTTTGCA...AAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CAA 90 bp CCTCGGGGGACATCCAGCGCAGCGGCACCCAGGCCTGGCGGAAGTGGTAGTACTTTTTCATCCTTGCTCTaGGAAATCCTCAGGAACTGC +
Preference number: 5 (lower is better)
Translates to: PRGTSSAAAPRPGGSGSTFSSLL*EILRNC
Trigger: GCAGTTCCTGAGGATTTCCAAGAGCAAGGATGAAAA...AGTACTACCACTTCCGCCAGGCCTGGGTGCCGCTGCGCTGGATGTCCCCCGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
CDS-3UTR CAA 90 bp GGTGGCAGGGAAAACTGCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAATGCACAAAGCGGTTGTaGGACAGGTGCTCCATGCCC +
Preference number: 5 (lower is better)
Translates to: GGRENCPAQSPSRPVWVQCTKRL*DRCSMP
Trigger: GGGCATGGAGCACCTGTCCAACAACCGCTTTGTGCA...TTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CAA 90 bp AGGCCCTGCTCAGACCTCAGCAATGCCTGTTGCACTAGGGCAGGGGCCTCAGGGTTATGCACAAAGCGGTaGTTGGACAGGTGCTCCATG +
Preference number: 5 (lower is better)
Translates to: RPCSDLSNACCTRAGASGLCTKR*LDRCSM
Trigger: CATGGAGCACCTGTCCAACAACCGCTTTGTGCATAA...CCCTGAGGCCCCTGCCCTAGTGCAACAGGCATTGCTGAGGTCTGAGCAGGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CAA 90 bp TGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTCTGTTGTACACATCCTaGCTGAGGCCCAGGGCAGAC +
Preference number: 5 (lower is better)
Translates to: WVWVSVHKPRVGRTHLLCLLYTS*LRPRAD
Trigger: GTCTGCCCTGGGCCTCAGCAAGGATGTGTACAACAG...ACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CAA 90 bp GGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTCCTCTATACTCCCTCCTCACGGCTaGCTGTCCACGGTGCTGTCT +
Preference number: 5 (lower is better)
Translates to: GQCAQAQSGEDSLAVSSILPPHG*LSTVLS
Trigger: AGACAGCACCGTGGACAGCAAGCCGTGAGGAGGGAG...TATAGAGGACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CAA 90 bp CAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCCTCCCTCCTCACGGCTaGCTGTCCACGGTGCTGTCT +
Preference number: 5 (lower is better)
Translates to: QEDRDLAHHAVSFPLEMSLPPHG*LSTVLS
Trigger: AGACAGCACCGTGGACAGCAAGCCGTGAGGAGGGAG...GGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR CAA 90 bp GGCAGGGAAAACTGCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTCCCTCCCCAGGCAAAGTaGGCAGATGAGTGGCAGAGT +
Preference number: 5 (lower is better)
Translates to: GRENCPAQSPSRPVWVQVPPQAK*ADEWQS
Trigger: ACTCTGCCACTCATCTGCCAACTTTGCCTGGGGAGG...GACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CAA 90 bp AGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCCCCAAGCCCTGAGCCTTaGCCAGGAACACCTCCCCAA +
Preference number: 5 (lower is better)
Translates to: RDLAHHAVSFPLEMSSPAPSPEP*PGTPPQ
Trigger: TTGGGGAGGTGTTCCTGGCAAAGGCTCAGGGCTTGG...GGCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CAA 90 bp ACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGCTGCTGCTCATCCTaGCTCTGCAGGCTCTTCACA +
Preference number: 5 (lower is better)
Translates to: TWVWVSVHKPRVGRTHLLCCCSS*LCRLFT
Trigger: TGTGAAGAGCCTGCAGAGCAAGGATGAGCAGCAGCA...CAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CAA 90 bp CCAAACTCACTCTTCCCCAGCGTGGTGATGGGCTGCAGGCTAGACCGTGGGAAGTGCTGCTGCTCATCCTaGCTCTGCAGGCTCTTCACA +
Preference number: 5 (lower is better)
Translates to: PNSLFPSVVMGCRLDRGKCCCSS*LCRLFT
Trigger: TGTGAAGAGCCTGCAGAGCAAGGATGAGCAGCAGCA...CTTCCCACGGTCTAGCCTGCAGCCCATCACCACGCTGGGGAAGAGTGAGTTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470019.5
ENST00000497957.1
CDS-3UTR CAA 90 bp GGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCAGGAGCCGCACCACGTaGGCGTGGTTCAGCTTCCCA +
Preference number: 5 (lower is better)
Translates to: GGQGSCPSCCELPSRDVLRSRTT*AWFSFP
Trigger: TGGGAAGCTGAACCACGCCAACGTGGTGCGGCTCCT...GAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR CAA 90 bp GATGTAGGCCACAGCGGCACCCACCGACAACCCAATGGTCTGGATCATCTTGTAAGGAGCCGCACCACGTaGGCGTGGTTCAGCTTCCCA +
Preference number: 5 (lower is better)
Translates to: DVGHSGTHRQPNGLDHLVRSRTT*AWFSFP
Trigger: TGGGAAGCTGAACCACGCCAACGTGGTGCGGCTCCT...TACAAGATGATCCAGACCATTGGGTTGTCGGTGGGTGCCGCTGTGGCCTACATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470019.5
ENST00000497957.1
CDS-3UTR CAA 90 bp CAGATGAGTGGCAGAGTTGGACCCGGTCAAGGGGAGAAGTTGAAGGCCAGAAATGCTCCCATCCAGCACTaGGACACGGGCTTGCGCCTC +
Preference number: 5 (lower is better)
Translates to: QMSGRVGPGQGEKLKARNAPIQH*DTGLRL
Trigger: GAGGCGCAAGCCCGTGTCCAAGTGCTGGATGGGAGC...ATTTCTGGCCTTCAACTTCTCCCCTTGACCGGGTCCAACTCTGCCACTCATCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000345201.6
CDS-3UTR CAA 90 bp GTCACTATTTCCTCTGGAGCACCCACCCTAACCCCTGTGCCTGGCTCTCTACTGCCCCTCCACCTCTCCTaGACCTTCAGGGCAAAGGTG +
Preference number: 5 (lower is better)
Translates to: VTISSGAPTLTPVPGSLLPLHLS*TFRAKV
Trigger: CACCTTTGCCCTGAAGGTCAAGGAGAGGTGGAGGGG...CAGTAGAGAGCCAGGCACAGGGGTTAGGGTGGGTGCTCCAGAGGAAATAGTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471863.5
CDS TCA 90 bp CTGTGCCTGGCTCTCTACTGTCTACACCGACTCCCAGTAGTGAACTaGTTCCCAAGCCTGCAGGGCCCAGAACTGAGAGGACCTCAGGTG +
Preference number: 5 (lower is better)
Translates to: LCLALYCLHRLPVVN*FPSLQGPELRGPQV
Trigger: CACCTGAGGTCCTCTCAGTTCTGGGCCCTGCAGGCTTGGGAATCAGTTCACTACTGGGAGTCGGTGTAGACAGTAGAGAGCCAGGCACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471863.5
CDS GCA 90 bp ATGGAACATGGCCTCCTCATACCTCGCTACTACCACGTCCTGGGGTaGCAGCACCACCCTGGCAAAGCTTTCATCGAGGGTGCCCATCAA +
Preference number: 5 (lower is better)
Translates to: MEHGLLIPRYYHVLG*QHHPGKAFIEGAHQ
Trigger: TTGATGGGCACCCTCGATGAAAGCTTTGCCAGGGTGGTGCTGGCACCCCAGGACGTGGTAGTAGCGAGGTATGAGGAGGCCATGTTCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS CCA 90 bp TGCTTGAGGTCTCCCCAGCGTGGTGATGGGCTGCAGGCTAGACCGTaGGAAGTGCATCTTATCACTTGTGCTGTGGCGTTTGTTGGTGGC +
Preference number: 5 (lower is better)
Translates to: CLRSPQRGDGLQARP*EVHLITCAVAFVGG
Trigger: GCCACCAACAAACGCCACAGCACAAGTGATAAGATGCACTTCCCACGGTCTAGCCTGCAGCCCATCACCACGCTGGGGAGACCTCAAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000461389.1
CDS CCA 90 bp CTGGGCCTCCTGGAGAAAAGAACCTTGTCCTACTGCATTCTGACCTaGTCCTCCTCCCCAGCCACCCAGAGATATGTGTGGCTGCTGCAG +
Preference number: 5 (lower is better)
Translates to: LGLLEKRTLSYCILT*SSSPATQRYVWLLQ
Trigger: CTGCAGCAGCCACACATATCTCTGGGTGGCTGGGGAGGAGGACCAGGTCAGAATGCAGTAGGACAAGGTTCTTTTCTCCAGGAGGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487673.5
ENST00000493339.1
CDS CCA 90 bp AGCTCTGGGAATGACACCCTGAGTGGAGAGGAGAAGGCTGGTGGCTaGGGTAACACTCATGTCACAAGTGGTGCTAGGAAGGAGGGAGGC +
Preference number: 5 (lower is better)
Translates to: SSGNDTLSGEEKAGG*GNTHVTSGARKEGG
Trigger: GCCTCCCTCCTTCCTAGCACCACTTGTGACATGAGTGTTACCCCAGCCACCAGCCTTCTCCTCTCCACTCAGGGTGTCATTCCCAGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493339.1
CDS-3UTR CAA 90 bp GGTGGCAGGGAAAACTGCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAATGGGAGGACGGCTGCTaGATGAAGACAATGGCTGTC +
Preference number: 5 (lower is better)
Translates to: GGRENCPAQSPSRPVWVQWEDGC*MKTMAV
Trigger: GACAGCCATTGTCTTCATCAAGCAGCCGTCCTCCCA...TTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CAA 90 bp GGCAGGGAAAACTGCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTCTGGGAGGACGGCTGCTaGATGAAGACAATGGCTGTC +
Preference number: 5 (lower is better)
Translates to: GRENCPAQSPSRPVWVQVWEDGC*MKTMAV
Trigger: GACAGCCATTGTCTTCATCAAGCAGCCGTCCTCCCA...GACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CAA 90 bp GAAGTGCATCTTATCACTTGTGCTGTGGCGTTTGTTGGTGGCCGCGGGGCCGGAATGTTGAAGGAGGCGTaGGCACTGCGGGCTTCTTCT +
Preference number: 5 (lower is better)
Translates to: EVHLITCAVAFVGGRGAGMLKEA*ALRASS
Trigger: AGAAGAAGCCCGCAGTGCCAACGCCTCCTTCAACAT...TCCGGCCCCGCGGCCACCAACAAACGCCACAGCACAAGTGATAAGATGCACTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR CAA 90 bp GACACTTGGCCAAGGGCTCGGCCGCCCTTTCCATTTGCACAAGCATGCAGCAGAATGTTGAAGGAGGCGTaGGCACTGCGGGCTTCTTCT +
Preference number: 5 (lower is better)
Translates to: DTWPRARPPFPFAQACSRMLKEA*ALRASS
Trigger: AGAAGAAGCCCGCAGTGCCAACGCCTCCTTCAACAT...TCTGCTGCATGCTTGTGCAAATGGAAAGGGCGGCCGAGCCCTTGGCCAAGTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476760.1
CDS-3UTR CAA 90 bp TTCTGCAAAGGCCCACCGTTGAGGCATTCCATCTCTGGCTCCTCGCCCTCGGGCCCTGCCTCAATCCATTaGATGTTGAAGGAGGCGTTG +
Preference number: 5 (lower is better)
Translates to: FCKGPPLRHSISGSSPSGPASIH*MLKEAL
Trigger: CAACGCCTCCTTCAACATCAAATGGATTGAGGCAGG...GCCCGAGGGCGAGGAGCCAGAGATGGAATGCCTCAACGGTGGGCCTTTGCAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR CAA 90 bp CCAGAAATTGGGGTTACCTGTGGCACCCACACTGTCCCTGATAGAGGAAGAGGTCCCATCTCGGAACCATaGGTAGGTGGGCCGAGGGTG +
Preference number: 5 (lower is better)
Translates to: PEIGVTCGTHTVPDRGRGPISEP*VGGPRV
Trigger: CACCCTCGGCCCACCTACCAATGGTTCCGAGATGGG...ACCTCTTCCTCTATCAGGGACAGTGTGGGTGCCACAGGTAACCCCAATTTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
CDS-3UTR CAA 90 bp AGCCAAGTCCTTATGCACAAAGCGGTTGTTGGACAGGTGCTCCATGCCCAGGGCAGCAGCAGAGACCCGTaGGCAAACACTGTGGCTCTG +
Preference number: 5 (lower is better)
Translates to: SQVLMHKAVVGQVLHAQGSSRDP*ANTVAL
Trigger: CAGAGCCACAGTGTTTGCCAACGGGTCTCTGCTGCT...GCCCTGGGCATGGAGCACCTGTCCAACAACCGCTTTGTGCATAAGGACTTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR CAA 90 bp GTGGGGAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTTCACTTTCAGCAATATaGGCCAACACCAGCTCGTGG +
Preference number: 5 (lower is better)
Translates to: VGKTWVWVSVHKPRVGRTSLSAI*ANTSSW
Trigger: CCACGAGCTGGTGTTGGCCAATATTGCTGAAAGTGA...AGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTCCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CAA 90 bp GGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCTCCAGCTGGCTGTCTaGGGGCTTCTTCAGCCAGGA +
Preference number: 5 (lower is better)
Translates to: GGQGSCPSCCELPSRDVLLQLAV*GLLQPG
Trigger: TCCTGGCTGAAGAAGCCCCAAGACAGCCAGCTGGAG...GAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR CAA 90 bp GAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTCGCAAGGTCCCATTCTaGAAGACCTCGAACCGTGAG +
Preference number: 5 (lower is better)
Translates to: EDVGLGQCAQAQSGEDSLRKVPF*KTSNRE
Trigger: CTCACGGTTCGAGGTCTTCAAGAATGGGACCTTGCG...AAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CAA 90 bp GGCAGGGAAAACTGCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTCTACACCTCCACGCTGTaGATGCGCAAGGTCCCATTC +
Preference number: 5 (lower is better)
Translates to: GRENCPAQSPSRPVWVQVYTSTL*MRKVPF
Trigger: GAATGGGACCTTGCGCATCAACAGCGTGGAGGTGTA...GACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CAA 90 bp ATGCCCACCCACCCCACGCTGCAATTACATATAAAAGCCGCCCGTGGTGCATACGAGCTTTTCCAGCACTaGGACACGGGCTTGCGCCTC +
Preference number: 5 (lower is better)
Translates to: MPTHPTLQLHIKAARGAYELFQH*DTGLRL
Trigger: GAGGCGCAAGCCCGTGTCCAAGTGCTGGAAAAGCTC...GTATGCACCACGGGCGGCTTTTATATGTAATTGCAGCGTGGGGTGGGTGGGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CAA 90 bp GGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCGAGCTTTTCCAGCACTaGGACACGGGCTTGCGCCTC +
Preference number: 5 (lower is better)
Translates to: GGQGSCPSCCELPSRDVLELFQH*DTGLRL
Trigger: GAGGCGCAAGCCCGTGTCCAAGTGCTGGAAAAGCTC...GAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CAA 90 bp CCAGAAATTGGGGTTACCTGTGGCACCCACACTGTCCCTGATAGAGGAAGAGGTTGCAGGGTCCCAGCGTaGTCTGTCACCCACTCTGGG +
Preference number: 5 (lower is better)
Translates to: PEIGVTCGTHTVPDRGRGCRVPA*SVTHSG
Trigger: CCCAGAGTGGGTGACAGACAACGCTGGGACCCTGCA...ACCTCTTCCTCTATCAGGGACAGTGTGGGTGCCACAGGTAACCCCAATTTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CAA 90 bp CAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCGGGGCCTCCGTGTGCTaGATGTTGCAGCTGTTGCCT +
Preference number: 5 (lower is better)
Translates to: QEDRDLAHHAVSFPLEMSGASVC*MLQLLP
Trigger: AGGCAACAGCTGCAACATCAAGCACACGGAGGCCCC...GGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CAA 90 bp GGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCGGGGCCTCCGTGTGCTaGATGTTGCAGCTGTTGCCT +
Preference number: 5 (lower is better)
Translates to: GGQGSCPSCCELPSRDVLGASVC*MLQLLP
Trigger: AGGCAACAGCTGCAACATCAAGCACACGGAGGCCCC...GAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CAA 90 bp ACGGTGCTGTCTCCCAGGGCGCTGGCAATCTCACTGAAGGAGGGCCGGTCCTTGAGTGCATCTTATCACTaGTGCTGTGGCGTTTGTTGG +
Preference number: 5 (lower is better)
Translates to: TVLSPRALAISLKEGRSLSASYH*CCGVCW
Trigger: CCAACAAACGCCACAGCACAAGTGATAAGATGCACT...CAAGGACCGGCCCTCCTTCAGTGAGATTGCCAGCGCCCTGGGAGACAGCACCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
CDS-3UTR CAA 90 bp CAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCTGCACAAAGCGGTTGTaGGACAGGTGCTCCATGCCC +
Preference number: 5 (lower is better)
Translates to: QGSCPSCCELPSRDVLPCCTKRL*DRCSMP
Trigger: GGGCATGGAGCACCTGTCCAACAACCGCTTTGTGCA...GCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR CAA 90 bp GTGGGGAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTTTATGCACAAAGCGGTaGTTGGACAGGTGCTCCATG +
Preference number: 5 (lower is better)
Translates to: VGKTWVWVSVHKPRVGRTLCTKR*LDRCSM
Trigger: CATGGAGCACCTGTCCAACAACCGCTTTGTGCATAA...AGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTCCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CAA 90 bp AGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCCCTGTTGTACACATCCTaGCTGAGGCCCAGGGCAGAC +
Preference number: 5 (lower is better)
Translates to: RDLAHHAVSFPLEMSSPALLYTS*LRPRAD
Trigger: GTCTGCCCTGGGCCTCAGCAAGGATGTGTACAACAG...GGCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR CAA 90 bp CAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCCTGTTGTACACATCCTaGCTGAGGCCCAGGGCAGAC +
Preference number: 5 (lower is better)
Translates to: QGSCPSCCELPSRDVLPCLLYTS*LRPRAD
Trigger: GTCTGCCCTGGGCCTCAGCAAGGATGTGTACAACAG...GCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR CAA 90 bp GGTGGCAGGGAAAACTGCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTTGAAGGCCAGAAATaGGGGTTACCTGTGGCACCC +
Preference number: 5 (lower is better)
Translates to: GGRENCPAQSPSRPVWVQVEGQK*GLPVAP
Trigger: GGGTGCCACAGGTAACCCCAATTTCTGGCCTTCAAC...TTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CAA 90 bp CAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTCAGCCTCCCAAAGGATGCCTCCCCAGGCAAAGTaGGCAGATGAGTGGCAGAGT +
Preference number: 5 (lower is better)
Translates to: QLKALVAQFGSKSASQRMPPQAK*ADEWQS
Trigger: ACTCTGCCACTCATCTGCCAACTTTGCCTGGGGAGG...CATCCTTTGGGAGGCTGACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CAA 90 bp GGGGGACATCCAGCGCAGCGGCACCCAGGCCTGGCGGAAGTGGTAGTACTCACTCTGTGTGCCCAGAACTaGAGAATATTAAGGAACTCC +
Preference number: 5 (lower is better)
Translates to: GGHPAQRHPGLAEVVVLTLCAQN*RILRNS
Trigger: GGAGTTCCTTAATATTCTCAAGTTCTGGGCACACAG...AGTGAGTACTACCACTTCCGCCAGGCCTGGGTGCCGCTGCGCTGGATGTCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR CAA 90 bp GAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCAAGCCCTGAGCCTTaGCCAGGAACACCTCCCCAA +
Preference number: 5 (lower is better)
Translates to: EDRDLAHHAVSFPLEMSSPSPEP*PGTPPQ
Trigger: TTGGGGAGGTGTTCCTGGCAAAGGCTCAGGGCTTGG...GGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CAA 90 bp GGCAGGGAAAACTGCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTCTGCTGCTGCTCATCCTaGCTCTGCAGGCTCTTCACA +
Preference number: 5 (lower is better)
Translates to: GRENCPAQSPSRPVWVQVCCCSS*LCRLFT
Trigger: TGTGAAGAGCCTGCAGAGCAAGGATGAGCAGCAGCA...GACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CAA 90 bp GAAGTGCATCTTATCACTTGTGCTGTGGCGTTTGTTGGTGGCCGCGGGGCCGGATGCTGCTGCTCATCCTaGCTCTGCAGGCTCTTCACA +
Preference number: 5 (lower is better)
Translates to: EVHLITCAVAFVGGRGAGCCCSS*LCRLFT
Trigger: TGTGAAGAGCCTGCAGAGCAAGGATGAGCAGCAGCA...TCCGGCCCCGCGGCCACCAACAAACGCCACAGCACAAGTGATAAGATGCACTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470019.5
ENST00000497957.1
CDS-3UTR CAA 90 bp GCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTCAGCCTCCCAAAGGATCCTCAGGAACTGCTaGAGGTCTCCCAGATCCACA +
Preference number: 5 (lower is better)
Translates to: AQLKALVAQFGSKSASQRILRNC*RSPRST
Trigger: TGTGGATCTGGGAGACCTCAAGCAGTTCCTGAGGAT...CCTTTGGGAGGCTGACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS TCA 90 bp GGCAAAGCTTTCATCGAGGGTGCCCATCAATGTGGCAACGAAGTGTaGCCTGGGTCTGTGGCTGGATCTCAGCTTCCGAGGCTGGATGCT +
Preference number: 5 (lower is better)
Translates to: GKAFIEGAHQCGNEV*PGSVAGSQLPRLDA
Trigger: AGCATCCAGCCTCGGAAGCTGAGATCCAGCCACAGACCCAGGTCACACTTCGTTGCCACATTGATGGGCACCCTCGATGAAAGCTTTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS TCA 90 bp CCTCTGTCCATCACACCCAGACCTGTGTTCCCCTCCACCTCTCCTTaGCCTTCAGGGCAAAGGTGCTCACTGGCCACAGTGATGTTGACA +
Preference number: 5 (lower is better)
Translates to: PLSITPRPVFPSTSP*PSGQRCSLATVMLT
Trigger: TGTCAACATCACTGTGGCCAGTGAGCACCTTTGCCCTGAAGGTCAAGGAGAGGTGGAGGGGAACACAGGTCTGGGTGTGATGGACAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471863.5
ENST00000481946.5
CDS GCA 90 bp AGGGGCAGCTGTAGTCAAGGCAACATACCCAGCGTGGTGATGGGCTaGAGGCTAGACCGTGGGAAGTGCATCTTATCACTTGTGCTGTGG +
Preference number: 5 (lower is better)
Translates to: RGSCSQGNIPSVVMG*RLDRGKCILSLVLW
Trigger: CCACAGCACAAGTGATAAGATGCACTTCCCACGGTCTAGCCTGCAGCCCATCACCACGCTGGGTATGTTGCCTTGACTACAGCTGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493339.1
CDS CCA 90 bp TGGCAATGGAACATGGCCTCCTCATACCTCGCTACTACCACGTCCTaGGGTGCCAGCACCACCCTGGCAAAGCTTTCATCAGCAATGCTC +
Preference number: 5 (lower is better)
Translates to: WQWNMASSYLATTTS*GASTTLAKLSSAML
Trigger: GAGCATTGCTGATGAAAGCTTTGCCAGGGTGGTGCTGGCACCCCAGGACGTGGTAGTAGCGAGGTATGAGGAGGCCATGTTCCATTGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000471863.5
ENST00000481273.5
ENST00000487673.5
CDS CCA 90 bp AGCTTTCATCGAGGGTGCCCATCAATGTGGCAACGAAGTGTGACCTaGGTCTGTGGCTGGATCTCAGCTTCCGAGGCTGGATGCTTCAGG +
Preference number: 5 (lower is better)
Translates to: SFHRGCPSMWQRSVT*VCGWISASEAGCFR
Trigger: CCTGAAGCATCCAGCCTCGGAAGCTGAGATCCAGCCACAGACCCAGGTCACACTTCGTTGCCACATTGATGGGCACCCTCGATGAAAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS CCA 90 bp GCAGGCATCCAAGAGCAGGGAAGGCAGAAGCTGAGCATCATAAGGTaGGCAAAGTGTAACAGCAGGCAGGTGAGGTCTCGGCTGAGACTG +
Preference number: 5 (lower is better)
Translates to: AGIQEQGRQKLSIIR*AKCNSRQVRSRLRL
Trigger: CAGTCTCAGCCGAGACCTCACCTGCCTGCTGTTACACTTTGCCCACCTTATGATGCTCAGCTTCTGCCTTCCCTGCTCTTGGATGCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493339.1
CDS CCA 90 bp TGCCATGTTCTGTACACAGGGGCTGAGTACAAGGTGACAAACGTCTaGGCCCACCACTTCCTGTGCAGCATAACCCTCCCCAGCCCATAC +
Preference number: 5 (lower is better)
Translates to: CHVLYTGAEYKVTNV*AHHFLCSITLPSPY
Trigger: GTATGGGCTGGGGAGGGTTATGCTGCACAGGAAGTGGTGGGCCCAGACGTTTGTCACCTTGTACTCAGCCCCTGTGTACAGAACATGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487673.5
CDS-3UTR CAA 90 bp AGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCCATGTTGAAGGAGGCGTaGGCACTGCGGGCTTCTTCT +
Preference number: 5 (lower is better)
Translates to: RDLAHHAVSFPLEMSSPAMLKEA*ALRASS
Trigger: AGAAGAAGCCCGCAGTGCCAACGCCTCCTTCAACAT...GGCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CAA 90 bp GAGGTGGCAGGGAAAACTGCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCCCTGCCTCAATCCATTaGATGTTGAAGGAGGCGTTG +
Preference number: 5 (lower is better)
Translates to: EVAGKTAQLKALVAQFGSPASIH*MLKEAL
Trigger: CAACGCCTCCTTCAACATCAAATGGATTGAGGCAGG...GGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCCACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CAA 90 bp CACATCAGCACACCGAAGGCCCAGACATCAGACTTGGTAGAGAAGTCACCCTCCGTCAGGTTCCGCTCCTaGCTGCTGACTGTGTGGTTG +
Preference number: 5 (lower is better)
Translates to: HISTPKAQTSDLVEKSPSVRFRS*LLTVWL
Trigger: CAACCACACAGTCAGCAGCAAGGAGCGGAACCTGAC...GGAGGGTGACTTCTCTACCAAGTCTGATGTCTGGGCCTTCGGTGTGCTGATGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230418.8
CDS-3UTR CAA 90 bp GGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCGTCAGGTTCCGCTCCTaGCTGCTGACTGTGTGGTTG +
Preference number: 5 (lower is better)
Translates to: GGQGSCPSCCELPSRDVLVRFRS*LLTVWL
Trigger: CAACCACACAGTCAGCAGCAAGGAGCGGAACCTGAC...GAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000481273.5
CDS-3UTR CAA 90 bp GGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTCCTCTATAAGCAGCAGAGACCCGTaGGCAAACACTGTGGCTCTG +
Preference number: 5 (lower is better)
Translates to: GQCAQAQSGEDSLAVSSISSRDP*ANTVAL
Trigger: CAGAGCCACAGTGTTTGCCAACGGGTCTCTGCTGCT...TATAGAGGACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CAA 90 bp GAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCAGCAGCAGAGACCCGTaGGCAAACACTGTGGCTCTG +
Preference number: 5 (lower is better)
Translates to: EDRDLAHHAVSFPLEMSSSSRDP*ANTVAL
Trigger: CAGAGCCACAGTGTTTGCCAACGGGTCTCTGCTGCT...GGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CAA 90 bp GGAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTCACTTTCAGCAATATaGGCCAACACCAGCTCGTGG +
Preference number: 5 (lower is better)
Translates to: GRRGSGSVCTSPEWGGLTSLSAI*ANTSSW
Trigger: CCACGAGCTGGTGTTGGCCAATATTGCTGAAAGTGA...AGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CAA 90 bp GTCCTTATGCACAAAGCGGTTGTTGGACAGGTGCTCCATGCCCAGGGCTACCTGCGCAAGGTCCCATTCTaGAAGACCTCGAACCGTGAG +
Preference number: 5 (lower is better)
Translates to: VLMHKAVVGQVLHAQGYLRKVPF*KTSNRE
Trigger: CTCACGGTTCGAGGTCTTCAAGAATGGGACCTTGCG...CAGGTAGCCCTGGGCATGGAGCACCTGTCCAACAACCGCTTTGTGCATAAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR CAA 90 bp AGGCCAGAAATTGGGGTTACCTGTGGCACCCACACTGTCCCTGATAGAGGAAGAGAGCTTTTCCAGCACTaGGACACGGGCTTGCGCCTC +
Preference number: 5 (lower is better)
Translates to: RPEIGVTCGTHTVPDRGRELFQH*DTGLRL
Trigger: GAGGCGCAAGCCCGTGTCCAAGTGCTGGAAAAGCTC...TCTTCCTCTATCAGGGACAGTGTGGGTGCCACAGGTAACCCCAATTTCTGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CAA 90 bp GATGTAGGCCACAGCGGCACCCACCGACAACCCAATGGTCTGGATCATCTTGTATGCAAAGGCCCACCGTaGAGGCATTCCATCTCTGGC +
Preference number: 5 (lower is better)
Translates to: DVGHSGTHRQPNGLDHLVCKGPP*RHSISG
Trigger: GCCAGAGATGGAATGCCTCAACGGTGGGCCTTTGCA...TACAAGATGATCCAGACCATTGGGTTGTCGGTGGGTGCCGCTGTGGCCTACATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
CDS-3UTR CAA 90 bp GTTCTGCAAAGGCCCACCGTTGAGGCATTCCATCTCTGGCTCCTCGCCCTCGGGAGTGCATCTTATCACTaGTGCTGTGGCGTTTGTTGG +
Preference number: 5 (lower is better)
Translates to: VLQRPTVEAFHLWLLALGSASYH*CCGVCW
Trigger: CCAACAAACGCCACAGCACAAGTGATAAGATGCACT...CCCGAGGGCGAGGAGCCAGAGATGGAATGCCTCAACGGTGGGCCTTTGCAGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
CDS-3UTR CAA 90 bp CAAAGGCCCACCGTTGAGGCATTCCATCTCTGGCTCCTCGCCCTCGGGCTGCTTAGTGCATCTTATCACTaGTGCTGTGGCGTTTGTTGG +
Preference number: 5 (lower is better)
Translates to: QRPTVEAFHLWLLALGLLSASYH*CCGVCW
Trigger: CCAACAAACGCCACAGCACAAGTGATAAGATGCACT...AAGCAGCCCGAGGGCGAGGAGCCAGAGATGGAATGCCTCAACGGTGGGCCTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
CDS-3UTR CAA 90 bp ACCTTCACTTGTCTCTGGGCACTGACCAGGCAGTTACGCGCAGCCAAGTCCTTATGCACAAAGCGGTTGTaGGACAGGTGCTCCATGCCC +
Preference number: 5 (lower is better)
Translates to: TFTCLWALTRQLRAAKSLCTKRL*DRCSMP
Trigger: GGGCATGGAGCACCTGTCCAACAACCGCTTTGTGCA...TAAGGACTTGGCTGCGCGTAACTGCCTGGTCAGTGCCCAGAGACAAGTGAAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
CDS-3UTR CAA 90 bp CAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCCTGTTGTACACATCCTaGCTGAGGCCCAGGGCAGAC +
Preference number: 5 (lower is better)
Translates to: QEDRDLAHHAVSFPLEMSLLYTS*LRPRAD
Trigger: GTCTGCCCTGGGCCTCAGCAAGGATGTGTACAACAG...GGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR CAA 90 bp CCAGAAATTGGGGTTACCTGTGGCACCCACACTGTCCCTGATAGAGGAAGAGGTCCAAGCCCTGAGCCTTaGCCAGGAACACCTCCCCAA +
Preference number: 5 (lower is better)
Translates to: PEIGVTCGTHTVPDRGRGPSPEP*PGTPPQ
Trigger: TTGGGGAGGTGTTCCTGGCAAAGGCTCAGGGCTTGG...ACCTCTTCCTCTATCAGGGACAGTGTGGGTGCCACAGGTAACCCCAATTTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CAA 90 bp CAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCTGCTGCTGCTCATCCTaGCTCTGCAGGCTCTTCACA +
Preference number: 5 (lower is better)
Translates to: QGSCPSCCELPSRDVLPCCCCSS*LCRLFT
Trigger: TGTGAAGAGCCTGCAGAGCAAGGATGAGCAGCAGCA...GCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS GCA 90 bp ATGGAACATGGCCTCCTCATACCTCGCTACTACCACGTCCTGGGGTaGCAGCACCACCCTGGCAAAGCTTTCATCAGCAATGCTCAAGGT +
Preference number: 5 (lower is better)
Translates to: MEHGLLIPRYYHVLG*QHHPGKAFISNAQG
Trigger: ACCTTGAGCATTGCTGATGAAAGCTTTGCCAGGGTGGTGCTGGCACCCCAGGACGTGGTAGTAGCGAGGTATGAGGAGGCCATGTTCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000471863.5
ENST00000481273.5
ENST00000487673.5
CDS CCA 90 bp ACCACCCTGGCAAAGCTTTCATCAGCAATGCTCAAGGTGAAGTTCTaGCTGCTGCAAGCCTGGCCAAAAGCACTGTGGGCGCAGCAGGAA +
Preference number: 5 (lower is better)
Translates to: TTLAKLSSAMLKVKF*LLQAWPKALWAQQE
Trigger: TTCCTGCTGCGCCCACAGTGCTTTTGGCCAGGCTTGCAGCAGCCAGAACTTCACCTTGAGCATTGCTGATGAAAGCTTTGCCAGGGTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000471863.5
ENST00000481273.5
ENST00000487673.5
CDS CCA 90 bp TCAAGGCAACATACCCAGCGTGGTGATGGGCTGCAGGCTAGACCGTaGGAAGTGCATCTTATCACTTGTGCTGTGGCGTTTGTTGGTGGC +
Preference number: 5 (lower is better)
Translates to: SRQHTQRGDGLQARP*EVHLITCAVAFVGG
Trigger: GCCACCAACAAACGCCACAGCACAAGTGATAAGATGCACTTCCCACGGTCTAGCCTGCAGCCCATCACCACGCTGGGTATGTTGCCTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493339.1
CDS-3UTR CAA 90 bp CCAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCTGGGAGGACGGCTGCTaGATGAAGACAATGGCTGTC +
Preference number: 5 (lower is better)
Translates to: PGGQGSCPSCCELPSRDVWEDGC*MKTMAV
Trigger: GACAGCCATTGTCTTCATCAAGCAGCCGTCCTCCCA...GACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CAA 90 bp GGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCATGTTGAAGGAGGCGTaGGCACTGCGGGCTTCTTCT +
Preference number: 5 (lower is better)
Translates to: GGQGSCPSCCELPSRDVLMLKEA*ALRASS
Trigger: AGAAGAAGCCCGCAGTGCCAACGCCTCCTTCAACAT...GAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CAA 90 bp GTTGCCCGGGCTGAAGAGCAACGGTGCGATCTCAGCTCATTGCAACCTCTGCCTCCTGCCTCAATCCATTaGATGTTGAAGGAGGCGTTG +
Preference number: 5 (lower is better)
Translates to: VARAEEQRCDLSSLQPLPPASIH*MLKEAL
Trigger: CAACGCCTCCTTCAACATCAAATGGATTGAGGCAGG...AGGCAGAGGTTGCAATGAGCTGAGATCGCACCGTTGCTCTTCAGCCCGGGCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471863.5
CDS-3UTR CAA 90 bp CAGATGAGTGGCAGAGTTGGACCCGGTCAAGGGGAGAAGTTGAAGGCCAGAAATAGCAGCAGAGACCCGTaGGCAAACACTGTGGCTCTG +
Preference number: 5 (lower is better)
Translates to: QMSGRVGPGQGEKLKARNSSRDP*ANTVAL
Trigger: CAGAGCCACAGTGTTTGCCAACGGGTCTCTGCTGCT...ATTTCTGGCCTTCAACTTCTCCCCTTGACCGGGTCCAACTCTGCCACTCATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CAA 90 bp TCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTCCTCTATAATCTCCAGCTGGCTGTCTaGGGGCTTCTTCAGCCAGGA +
Preference number: 5 (lower is better)
Translates to: SVCTSPEWGGLTCCVLYNLQLAV*GLLQPG
Trigger: TCCTGGCTGAAGAAGCCCCAAGACAGCCAGCTGGAG...ATTATAGAGGACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CAA 90 bp CTGCAGGCTAGACCGTGGGAAGTGCATCTTATCACTTGTGCTGTGGCGTTTGTTCTCCAGCTGGCTGTCTaGGGGCTTCTTCAGCCAGGA +
Preference number: 5 (lower is better)
Translates to: LQARPWEVHLITCAVAFVLQLAV*GLLQPG
Trigger: TCCTGGCTGAAGAAGCCCCAAGACAGCCAGCTGGAG...AACAAACGCCACAGCACAAGTGATAAGATGCACTTCCCACGGTCTAGCCTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR CAA 90 bp CACATCAGCACACCGAAGGCCCAGACATCAGACTTGGTAGAGAAGTCACCCTCCCGCAAGGTCCCATTCTaGAAGACCTCGAACCGTGAG +
Preference number: 5 (lower is better)
Translates to: HISTPKAQTSDLVEKSPSRKVPF*KTSNRE
Trigger: CTCACGGTTCGAGGTCTTCAAGAATGGGACCTTGCG...GGAGGGTGACTTCTCTACCAAGTCTGATGTCTGGGCCTTCGGTGTGCTGATGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR CAA 90 bp GGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTCCTCTATACGCAAGGTCCCATTCTaGAAGACCTCGAACCGTGAG +
Preference number: 5 (lower is better)
Translates to: GQCAQAQSGEDSLAVSSIRKVPF*KTSNRE
Trigger: CTCACGGTTCGAGGTCTTCAAGAATGGGACCTTGCG...TATAGAGGACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CAA 90 bp CAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCCGCAAGGTCCCATTCTaGAAGACCTCGAACCGTGAG +
Preference number: 5 (lower is better)
Translates to: QEDRDLAHHAVSFPLEMSRKVPF*KTSNRE
Trigger: CTCACGGTTCGAGGTCTTCAAGAATGGGACCTTGCG...GGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CAA 90 bp CCAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCTACACCTCCACGCTGTaGATGCGCAAGGTCCCATTC +
Preference number: 5 (lower is better)
Translates to: PGGQGSCPSCCELPSRDVYTSTL*MRKVPF
Trigger: GAATGGGACCTTGCGCATCAACAGCGTGGAGGTGTA...GACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CAA 90 bp CAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCTCCGTGTGCTTGATGTaGCAGCTGTTGCCTGCAATG +
Preference number: 5 (lower is better)
Translates to: QGSCPSCCELPSRDVLPCSVCLM*QLLPAM
Trigger: CATTGCAGGCAACAGCTGCAACATCAAGCACACGGA...GCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CAA 90 bp GGAAGACGTGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTAGTGCATCTTATCACTaGTGCTGTGGCGTTTGTTGG +
Preference number: 5 (lower is better)
Translates to: GRRGSGSVCTSPEWGGLTSASYH*CCGVCW
Trigger: CCAACAAACGCCACAGCACAAGTGATAAGATGCACT...AGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCACGTCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CAA 90 bp AGGCCAGAAATTGGGGTTACCTGTGGCACCCACACTGTCCCTGATAGAGGAAGATGCACAAAGCGGTTGTaGGACAGGTGCTCCATGCCC +
Preference number: 5 (lower is better)
Translates to: RPEIGVTCGTHTVPDRGRCTKRL*DRCSMP
Trigger: GGGCATGGAGCACCTGTCCAACAACCGCTTTGTGCA...TCTTCCTCTATCAGGGACAGTGTGGGTGCCACAGGTAACCCCAATTTCTGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CAA 90 bp TGTGTCCTCTATAATCCTGGTCTAGACCCCCAAGTGGGACCAGTGGGCCAAGAGGTTGAAGGCCAGAAATaGGGGTTACCTGTGGCACCC +
Preference number: 5 (lower is better)
Translates to: CVLYNPGLDPQVGPVGQEVEGQK*GLPVAP
Trigger: GGGTGCCACAGGTAACCCCAATTTCTGGCCTTCAAC...CTCTTGGCCCACTGGTCCCACTTGGGGGTCTAGACCAGGATTATAGAGGACACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CAA 90 bp GAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCGTTGAAGGCCAGAAATaGGGGTTACCTGTGGCACCC +
Preference number: 5 (lower is better)
Translates to: EDRDLAHHAVSFPLEMSSVEGQK*GLPVAP
Trigger: GGGTGCCACAGGTAACCCCAATTTCTGGCCTTCAAC...GGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CAA 90 bp TCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTCCTCTATAATCCAAGCCCTGAGCCTTaGCCAGGAACACCTCCCCAA +
Preference number: 5 (lower is better)
Translates to: SVCTSPEWGGLTCCVLYNPSPEP*PGTPPQ
Trigger: TTGGGGAGGTGTTCCTGGCAAAGGCTCAGGGCTTGG...ATTATAGAGGACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CAA 90 bp TGTGTCCTCTATAATCCTGGTCTAGACCCCCAAGTGGGACCAGTGGGCCAAGAGTGCTGCTGCTCATCCTaGCTCTGCAGGCTCTTCACA +
Preference number: 5 (lower is better)
Translates to: CVLYNPGLDPQVGPVGQECCCSS*LCRLFT
Trigger: TGTGAAGAGCCTGCAGAGCAAGGATGAGCAGCAGCA...CTCTTGGCCCACTGGTCCCACTTGGGGGTCTAGACCAGGATTATAGAGGACACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CAA 90 bp AGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCCATCCTCAGGAACTGCTaGAGGTCTCCCAGATCCACA +
Preference number: 5 (lower is better)
Translates to: RDLAHHAVSFPLEMSSPAILRNC*RSPRST
Trigger: TGTGGATCTGGGAGACCTCAAGCAGTTCCTGAGGAT...GGCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS TCA 90 bp GCTGCCACAAAAATGGCTTCTGTGCCATGTTCTGTACACAGGGGCTaGGTACAAGGTGACAAACGTCTGGGCCCACCACTTCCTGTGCAG +
Preference number: 5 (lower is better)
Translates to: AATKMASVPCSVHRG*VQGDKRLGPPLPVQ
Trigger: CTGCACAGGAAGTGGTGGGCCCAGACGTTTGTCACCTTGTACTCAGCCCCTGTGTACAGAACATGGCACAGAAGCCATTTTTGTGGCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487673.5
CDS GCA 90 bp TGGCCACCATGGGGATTTCTGTTCTGTCCCCTGGTCTTCCACTCTTaGCAACTTGGGTCCAATCACAGTGCTCCACATGAAAGGGCAAGC +
Preference number: 5 (lower is better)
Translates to: WPPWGFLFCPLVFHS*QLGSNHSAPHERAS
Trigger: GCTTGCCCTTTCATGTGGAGCACTGTGATTGGACCCAAGTTGGCAAGAGTGGAAGACCAGGGGACAGAACAGAAATCCCCATGGTGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461389.1
ENST00000473339.1
CDS CCA 90 bp ACGAAGTGTGACCTGGGTCTGTGGCTGGATCTCAGCTTCCGAGGCTaGATGCTTCAGGACCACAGGACCTGCCTCAATCCATTTGATGTT +
Preference number: 5 (lower is better)
Translates to: TKCDLGLWLDLSFRG*MLQDHRTCLNPFDV
Trigger: AACATCAAATGGATTGAGGCAGGTCCTGTGGTCCTGAAGCATCCAGCCTCGGAAGCTGAGATCCAGCCACAGACCCAGGTCACACTTCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000471863.5
ENST00000481273.5
ENST00000487673.5
CDS CCA 90 bp ACTACCATTCTAGGCCCTGAGTTCAGAAGCCCCATGCTCCTCAGATaGCAGGAGTTTCCCTTTACGGAAGACCCAGGTGCCAGCACCTTT +
Preference number: 5 (lower is better)
Translates to: TTILGPEFRSPMLLR*QEFPFTEDPGASTF
Trigger: AAAGGTGCTGGCACCTGGGTCTTCCGTAAAGGGAAACTCCTGCCATCTGAGGAGCATGGGGCTTCTGAACTCAGGGCCTAGAATGGTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470471.1
CDS CCA 90 bp GTACCCAGAGGACCATTTTTCTGTGAGGGCTGTCACTATTTCCTCTaGAGCACCCACCCTAACCCCTGTGCCTGGCTCTCTACTGTCTAC +
Preference number: 5 (lower is better)
Translates to: VPRGPFFCEGCHYFL*STHPNPCAWLSTVY
Trigger: GTAGACAGTAGAGAGCCAGGCACAGGGGTTAGGGTGGGTGCTCCAGAGGAAATAGTGACAGCCCTCACAGAAAAATGGTCCTCTGGGTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471863.5
CDS-3UTR CAA 90 bp CCAGAAATTGGGGTTACCTGTGGCACCCACACTGTCCCTGATAGAGGAAGAGGTTGGGAGGACGGCTGCTaGATGAAGACAATGGCTGTC +
Preference number: 5 (lower is better)
Translates to: PEIGVTCGTHTVPDRGRGWEDGC*MKTMAV
Trigger: GACAGCCATTGTCTTCATCAAGCAGCCGTCCTCCCA...ACCTCTTCCTCTATCAGGGACAGTGTGGGTGCCACAGGTAACCCCAATTTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CAA 90 bp CAGATGAGTGGCAGAGTTGGACCCGGTCAAGGGGAGAAGTTGAAGGCCAGAAATATGTTGAAGGAGGCGTaGGCACTGCGGGCTTCTTCT +
Preference number: 5 (lower is better)
Translates to: QMSGRVGPGQGEKLKARNMLKEA*ALRASS
Trigger: AGAAGAAGCCCGCAGTGCCAACGCCTCCTTCAACAT...ATTTCTGGCCTTCAACTTCTCCCCTTGACCGGGTCCAACTCTGCCACTCATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CAA 90 bp TGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTTCAATCCATTTGATGTaGAAGGAGGCGTTGGCACTG +
Preference number: 5 (lower is better)
Translates to: WVWVSVHKPRVGRTHLLCSIHLM*KEALAL
Trigger: CAGTGCCAACGCCTCCTTCAACATCAAATGGATTGA...ACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CAA 90 bp CTGTTGCCCGGGCTGAAGAGCAACGGTGCGATCTCAGCTCATTGCAACCTCTGCTCAATCCATTTGATGTaGAAGGAGGCGTTGGCACTG +
Preference number: 5 (lower is better)
Translates to: LLPGLKSNGAISAHCNLCSIHLM*KEALAL
Trigger: CAGTGCCAACGCCTCCTTCAACATCAAATGGATTGA...GCAGAGGTTGCAATGAGCTGAGATCGCACCGTTGCTCTTCAGCCCGGGCAACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471863.5
CDS-3UTR CAA 90 bp AGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCCTCACTTTCAGCAATATaGGCCAACACCAGCTCGTGG +
Preference number: 5 (lower is better)
Translates to: RDLAHHAVSFPLEMSSPASLSAI*ANTSSW
Trigger: CCACGAGCTGGTGTTGGCCAATATTGCTGAAAGTGA...GGCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR CAA 90 bp CAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCTCACTTTCAGCAATATaGGCCAACACCAGCTCGTGG +
Preference number: 5 (lower is better)
Translates to: QGSCPSCCELPSRDVLPCSLSAI*ANTSSW
Trigger: CCACGAGCTGGTGTTGGCCAATATTGCTGAAAGTGA...GCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR CAA 90 bp CAGATGAGTGGCAGAGTTGGACCCGGTCAAGGGGAGAAGTTGAAGGCCAGAAATTACACCTCCACGCTGTaGATGCGCAAGGTCCCATTC +
Preference number: 5 (lower is better)
Translates to: QMSGRVGPGQGEKLKARNYTSTL*MRKVPF
Trigger: GAATGGGACCTTGCGCATCAACAGCGTGGAGGTGTA...ATTTCTGGCCTTCAACTTCTCCCCTTGACCGGGTCCAACTCTGCCACTCATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CAA 90 bp AAAGCCGCCCGTGGTGCATACAAAAAGGGCGGTTTATATAGTGTCAAAAGCTCCTGCAGGGTCCCAGCGTaGTCTGTCACCCACTCTGGG +
Preference number: 5 (lower is better)
Translates to: KAARGAYKKGGLYSVKSSCRVPA*SVTHSG
Trigger: CCCAGAGTGGGTGACAGACAACGCTGGGACCCTGCA...GGAGCTTTTGACACTATATAAACCGCCCTTTTTGTATGCACCACGGGCGGCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CAA 90 bp TGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTAGTGCATCTTATCACTaGTGCTGTGGCGTTTGTTGG +
Preference number: 5 (lower is better)
Translates to: WVWVSVHKPRVGRTHLLCSASYH*CCGVCW
Trigger: CCAACAAACGCCACAGCACAAGTGATAAGATGCACT...ACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CAA 90 bp GAAGTTGAAGGCCAGAAATTGGGGTTACCTGTGGCACCCACACTGTCCCTGATACTGTTGTACACATCCTaGCTGAGGCCCAGGGCAGAC +
Preference number: 5 (lower is better)
Translates to: EVEGQKLGLPVAPTLSLILLYTS*LRPRAD
Trigger: GTCTGCCCTGGGCCTCAGCAAGGATGTGTACAACAG...TATCAGGGACAGTGTGGGTGCCACAGGTAACCCCAATTTCTGGCCTTCAACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CAA 90 bp TACACCTCCACGCTGTTGATGCGCAAGGTCCCATTCTTGAAGACCTCGAACCGTGTTGAAGGCCAGAAATaGGGGTTACCTGTGGCACCC +
Preference number: 5 (lower is better)
Translates to: YTSTLLMRKVPFLKTSNRVEGQK*GLPVAP
Trigger: GGGTGCCACAGGTAACCCCAATTTCTGGCCTTCAAC...ACGGTTCGAGGTCTTCAAGAATGGGACCTTGCGCATCAACAGCGTGGAGGTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR CAA 90 bp GCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTCAGCCTCCCAAAGGCTGTGTGCCCAGAACTaGAGAATATTAAGGAACTCC +
Preference number: 5 (lower is better)
Translates to: AQLKALVAQFGSKSASQRLCAQN*RILRNS
Trigger: GGAGTTCCTTAATATTCTCAAGTTCTGGGCACACAG...CCTTTGGGAGGCTGACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CAA 90 bp GCGTCATCTCGAGTCACCCGGGCAAAATGCAGGGTCCCAGCGTTGTCTGTCACCCTGTGTGCCCAGAACTaGAGAATATTAAGGAACTCC +
Preference number: 5 (lower is better)
Translates to: ASSRVTRAKCRVPALSVTLCAQN*RILRNS
Trigger: GGAGTTCCTTAATATTCTCAAGTTCTGGGCACACAG...GGTGACAGACAACGCTGGGACCCTGCATTTTGCCCGGGTGACTCGAGATGACGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR CAA 90 bp CCAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCATCCTCAGGAACTGCTaGAGGTCTCCCAGATCCACA +
Preference number: 5 (lower is better)
Translates to: PGGQGSCPSCCELPSRDVILRNC*RSPRST
Trigger: TGTGGATCTGGGAGACCTCAAGCAGTTCCTGAGGAT...GACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR CAA 90 bp GAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCATCCTCAGGAACTGCTaGAGGTCTCCCAGATCCACA +
Preference number: 5 (lower is better)
Translates to: EDRDLAHHAVSFPLEMSSILRNC*RSPRST
Trigger: TGTGGATCTGGGAGACCTCAAGCAGTTCCTGAGGAT...GGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR CAA 90 bp AAGTCTGACACTTGGCCAAGGGCTCGGCCGCCCTTTCCATTTGCACAAGCATGCCTCTCACATTTGATGTaGAAGGAGGCGTTGGCACTG +
Preference number: 5 (lower is better)
Translates to: KSDTWPRARPPFPFAQACLSHLM*KEALAL
Trigger: CAGTGCCAACGCCTCCTTCAACATCAAATGTGAGAG...GCATGCTTGTGCAAATGGAAAGGGCGGCCGAGCCCTTGGCCAAGTGTCAGACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476760.1
CDS TCA 90 bp ATAAATGCATTCTGCCTGGCCCGTTTAACTGGAAATGGGAGAAGCTaGGGTAAGGGAGGGATCCCCCAGGCCTCAGTCATTGAGGGTCTG +
Preference number: 5 (lower is better)
Translates to: INAFCLARLTGNGRS*GKGGIPQASVIEGL
Trigger: CAGACCCTCAATGACTGAGGCCTGGGGGATCCCTCCCTTACCTCAGCTTCTCCCATTTCCAGTTAAACGGGCCAGGCAGAATGCATTTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476760.1
CDS-3UTR CAA 90 bp TCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTCCTCTATAATTGGGAGGACGGCTGCTaGATGAAGACAATGGCTGTC +
Preference number: 5 (lower is better)
Translates to: SVCTSPEWGGLTCCVLYNWEDGC*MKTMAV
Trigger: GACAGCCATTGTCTTCATCAAGCAGCCGTCCTCCCA...ATTATAGAGGACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CAA 90 bp GAAGTTGAAGGCCAGAAATTGGGGTTACCTGTGGCACCCACACTGTCCCTGATAATGTTGAAGGAGGCGTaGGCACTGCGGGCTTCTTCT +
Preference number: 5 (lower is better)
Translates to: EVEGQKLGLPVAPTLSLIMLKEA*ALRASS
Trigger: AGAAGAAGCCCGCAGTGCCAACGCCTCCTTCAACAT...TATCAGGGACAGTGTGGGTGCCACAGGTAACCCCAATTTCTGGCCTTCAACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CAA 90 bp CAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCTCAATCCATTTGATGTaGAAGGAGGCGTTGGCACTG +
Preference number: 5 (lower is better)
Translates to: QGSCPSCCELPSRDVLPCSIHLM*KEALAL
Trigger: CAGTGCCAACGCCTCCTTCAACATCAAATGGATTGA...GCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CAA 90 bp CAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCCCTGCCTCAATCCATTaGATGTTGAAGGAGGCGTTG +
Preference number: 5 (lower is better)
Translates to: QEDRDLAHHAVSFPLEMSPASIH*MLKEAL
Trigger: CAACGCCTCCTTCAACATCAAATGGATTGAGGCAGG...GGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CAA 90 bp GGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTCCTCTATACCTGCCTCAATCCATTaGATGTTGAAGGAGGCGTTG +
Preference number: 5 (lower is better)
Translates to: GQCAQAQSGEDSLAVSSIPASIH*MLKEAL
Trigger: CAACGCCTCCTTCAACATCAAATGGATTGAGGCAGG...TATAGAGGACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CAA 90 bp GAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCCTCAATCCATTaGATGTTGAAGGAGGCGTTG +
Preference number: 5 (lower is better)
Translates to: EDRDLAHHAVSFPLEMSSPASIH*MLKEAL
Trigger: CAACGCCTCCTTCAACATCAAATGGATTGAGGCAGG...GGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CAA 90 bp CACTCTGTGCATTGGGAGCATAGTGGGACCCAGGTCTCTAGATTCCTAGTCTATGTCAGGTTCCGCTCCTaGCTGCTGACTGTGTGGTTG +
Preference number: 5 (lower is better)
Translates to: HSVHWEHSGTQVSRFLVYVRFRS*LLTVWL
Trigger: CAACCACACAGTCAGCAGCAAGGAGCGGAACCTGAC...ATAGACTAGGAATCTAGAGACCTGGGTCCCACTATGCTCCCAATGCACAGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471863.5
CDS-3UTR CAA 90 bp CACTCTGTGCATTGGGAGCATAGTGGGACCCAGGTCTCTAGATTCCTAGTCTATAGCAGCAGAGACCCGTaGGCAAACACTGTGGCTCTG +
Preference number: 5 (lower is better)
Translates to: HSVHWEHSGTQVSRFLVYSSRDP*ANTVAL
Trigger: CAGAGCCACAGTGTTTGCCAACGGGTCTCTGCTGCT...ATAGACTAGGAATCTAGAGACCTGGGTCCCACTATGCTCCCAATGCACAGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471863.5
CDS-3UTR CAA 90 bp CCAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCTCACTTTCAGCAATATaGGCCAACACCAGCTCGTGG +
Preference number: 5 (lower is better)
Translates to: PGGQGSCPSCCELPSRDVSLSAI*ANTSSW
Trigger: CCACGAGCTGGTGTTGGCCAATATTGCTGAAAGTGA...GACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR CAA 90 bp GGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTCCTCTATATCACTTTCAGCAATATaGGCCAACACCAGCTCGTGG +
Preference number: 5 (lower is better)
Translates to: GQCAQAQSGEDSLAVSSISLSAI*ANTSSW
Trigger: CCACGAGCTGGTGTTGGCCAATATTGCTGAAAGTGA...TATAGAGGACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CAA 90 bp CTGGTCAAGGCCACTTCTTCTTGGATCTCTGCTGAGGGCTGCCCGTTCTGCAAATCACTTTCAGCAATATaGGCCAACACCAGCTCGTGG +
Preference number: 5 (lower is better)
Translates to: LVKATSSWISAEGCPFCKSLSAI*ANTSSW
Trigger: CCACGAGCTGGTGTTGGCCAATATTGCTGAAAGTGA...TTTGCAGAACGGGCAGCCCTCAGCAGAGATCCAAGAAGAAGTGGCCTTGACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS-3UTR CAA 90 bp TCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTCCTCTATAATTACACCTCCACGCTGTaGATGCGCAAGGTCCCATTC +
Preference number: 5 (lower is better)
Translates to: SVCTSPEWGGLTCCVLYNYTSTL*MRKVPF
Trigger: GAATGGGACCTTGCGCATCAACAGCGTGGAGGTGTA...ATTATAGAGGACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CAA 90 bp AAAGCCGCCCGTGGTGCATACAAAAAGGGCGGTTTATATAGTGTCAAAAGCTCCGAGCTTTTCCAGCACTaGGACACGGGCTTGCGCCTC +
Preference number: 5 (lower is better)
Translates to: KAARGAYKKGGLYSVKSSELFQH*DTGLRL
Trigger: GAGGCGCAAGCCCGTGTCCAAGTGCTGGAAAAGCTC...GGAGCTTTTGACACTATATAAACCGCCCTTTTTGTATGCACCACGGGCGGCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CAA 90 bp TTGTCTCTGGGCACTGACCAGGCAGTTACGCGCAGCCAAGTCCTTATGCACAAATCCGTGTGCTTGATGTaGCAGCTGTTGCCTGCAATG +
Preference number: 5 (lower is better)
Translates to: LSLGTDQAVTRSQVLMHKSVCLM*QLLPAM
Trigger: CATTGCAGGCAACAGCTGCAACATCAAGCACACGGA...TTTGTGCATAAGGACTTGGCTGCGCGTAACTGCCTGGTCAGTGCCCAGAGACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000470019.5
CDS-3UTR CAA 90 bp CAGATGAGTGGCAGAGTTGGACCCGGTCAAGGGGAGAAGTTGAAGGCCAGAAATTCCGTGTGCTTGATGTaGCAGCTGTTGCCTGCAATG +
Preference number: 5 (lower is better)
Translates to: QMSGRVGPGQGEKLKARNSVCLM*QLLPAM
Trigger: CATTGCAGGCAACAGCTGCAACATCAAGCACACGGA...ATTTCTGGCCTTCAACTTCTCCCCTTGACCGGGTCCAACTCTGCCACTCATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000470019.5
CDS-3UTR CAA 90 bp CTTGAGAATATTAAGGAACTCCCCACAAACCCAGCTCATCCCAAGCCTAGCCCTTGCAAAGGCCCACCGTaGAGGCATTCCATCTCTGGC +
Preference number: 5 (lower is better)
Translates to: LENIKELPTNPAHPKPSPCKGPP*RHSISG
Trigger: GCCAGAGATGGAATGCCTCAACGGTGGGCCTTTGCA...AGGGCTAGGCTTGGGATGAGCTGGGTTTGTGGGGAGTTCCTTAATATTCTCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CAA 90 bp CAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAAGTCAGCCTCCCAAAGGATGAGTGCATCTTATCACTaGTGCTGTGGCGTTTGTTGG +
Preference number: 5 (lower is better)
Translates to: QLKALVAQFGSKSASQRMSASYH*CCGVCW
Trigger: CCAACAAACGCCACAGCACAAGTGATAAGATGCACT...CATCCTTTGGGAGGCTGACTTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CAA 90 bp CAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCAGTGCATCTTATCACTaGTGCTGTGGCGTTTGTTGG +
Preference number: 5 (lower is better)
Translates to: QGSCPSCCELPSRDVLPCSASYH*CCGVCW
Trigger: CCAACAAACGCCACAGCACAAGTGATAAGATGCACT...GCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CAA 90 bp GACCGTGGGAAGTGCATCTTATCACTTGTGCTGTGGCGTTTGTTGGTGGCCGCGAGTGCATCTTATCACTaGTGCTGTGGCGTTTGTTGG +
Preference number: 5 (lower is better)
Translates to: DRGKCILSLVLWRLLVAASASYH*CCGVCW
Trigger: CCAACAAACGCCACAGCACAAGTGATAAGATGCACT...CGCGGCCACCAACAAACGCCACAGCACAAGTGATAAGATGCACTTCCCACGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461100.5
ENST00000470019.5
ENST00000494146.5
ENST00000497957.1
CDS-3UTR CAA 90 bp TGGGTCTGGGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTTTTTCATCCTTGCTCTaGGAAATCCTCAGGAACTGC +
Preference number: 5 (lower is better)
Translates to: WVWVSVHKPRVGRTHLLCFSSLL*EILRNC
Trigger: GCAGTTCCTGAGGATTTCCAAGAGCAAGGATGAAAA...ACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACCCAGACCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CAA 90 bp GGTGGCAGGGAAAACTGCCCAGCTCAAAGCCCTAGTCGCCCAGTTTGGGTCCAATTTTCATCCTTGCTCTaGGAAATCCTCAGGAACTGC +
Preference number: 5 (lower is better)
Translates to: GGRENCPAQSPSRPVWVQFSSLL*EILRNC
Trigger: GCAGTTCCTGAGGATTTCCAAGAGCAAGGATGAAAA...TTGGACCCAAACTGGGCGACTAGGGCTTTGAGCTGGGCAGTTTTCCCTGCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CAA 90 bp GGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCTTATGCACAAAGCGGTaGTTGGACAGGTGCTCCATG +
Preference number: 5 (lower is better)
Translates to: GGQGSCPSCCELPSRDVLLCTKR*LDRCSM
Trigger: CATGGAGCACCTGTCCAACAACCGCTTTGTGCATAA...GAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR CAA 90 bp CCAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCTTATGCACAAAGCGGTaGTTGGACAGGTGCTCCATG +
Preference number: 5 (lower is better)
Translates to: PGGQGSCPSCCELPSRDVLCTKR*LDRCSM
Trigger: CATGGAGCACCTGTCCAACAACCGCTTTGTGCATAA...GACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS CCA 90 bp TTTGCCAGGAACACCTCGAACCGTGAGTCCTCTGAGATGAGCATCTaGTTTCTGTACCAGACAACTGTAGGTTTTGGTGTGGCCTGGGTC +
Preference number: 5 (lower is better)
Translates to: FARNTSNRESSEMSI*FLYQTTVGFGVAWV
Trigger: GACCCAGGCCACACCAAAACCTACAGTTGTCTGGTACAGAAACCAGATGCTCATCTCAGAGGACTCACGGTTCGAGGTGTTCCTGGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489707.5
CDS-3UTR CAA 90 bp GAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCTCAATCCATTTGATGTaGAAGGAGGCGTTGGCACTG +
Preference number: 5 (lower is better)
Translates to: EDRDLAHHAVSFPLEMSSSIHLM*KEALAL
Trigger: CAGTGCCAACGCCTCCTTCAACATCAAATGGATTGA...GGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CAA 90 bp TCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTCCTCTATAATTCCGTGTGCTTGATGTaGCAGCTGTTGCCTGCAATG +
Preference number: 5 (lower is better)
Translates to: SVCTSPEWGGLTCCVLYNSVCLM*QLLPAM
Trigger: CATTGCAGGCAACAGCTGCAACATCAAGCACACGGA...ATTATAGAGGACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000470019.5
CDS-3UTR CAA 90 bp ATGCCCACCCACCCCACGCTGCAATTACATATAAAAGCCGCCCGTGGTGCATACAGTGCATCTTATCACTaGTGCTGTGGCGTTTGTTGG +
Preference number: 5 (lower is better)
Translates to: MPTHPTLQLHIKAARGAYSASYH*CCGVCW
Trigger: CCAACAAACGCCACAGCACAAGTGATAAGATGCACT...GTATGCACCACGGGCGGCTTTTATATGTAATTGCAGCGTGGGGTGGGTGGGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CAA 90 bp CAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCAGTGCATCTTATCACTaGTGCTGTGGCGTTTGTTGG +
Preference number: 5 (lower is better)
Translates to: QEDRDLAHHAVSFPLEMSSASYH*CCGVCW
Trigger: CCAACAAACGCCACAGCACAAGTGATAAGATGCACT...GGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000481273.5
CDS-3UTR CAA 90 bp ATCTGCCTGCCCACCATGGGGCATCTCTCCATGTGTAAACACTTCCCACATCAGTTATGCACAAAGCGGTaGTTGGACAGGTGCTCCATG +
Preference number: 5 (lower is better)
Translates to: ICLPTMGHLSMCKHFPHQLCTKR*LDRCSM
Trigger: CATGGAGCACCTGTCCAACAACCGCTTTGTGCATAA...CTGATGTGGGAAGTGTTTACACATGGAGAGATGCCCCATGGTGGGCAGGCAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
CDS-3UTR CAA 90 bp CCAGAAATTGGGGTTACCTGTGGCACCCACACTGTCCCTGATAGAGGAAGAGGTTTATGCACAAAGCGGTaGTTGGACAGGTGCTCCATG +
Preference number: 5 (lower is better)
Translates to: PEIGVTCGTHTVPDRGRGLCTKR*LDRCSM
Trigger: CATGGAGCACCTGTCCAACAACCGCTTTGTGCATAA...ACCTCTTCCTCTATCAGGGACAGTGTGGGTGCCACAGGTAACCCCAATTTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CAA 90 bp CTTGAGAATATTAAGGAACTCCCCACAAACCCAGCTCATCCCAAGCCTAGCCCTGTTGAAGGCCAGAAATaGGGGTTACCTGTGGCACCC +
Preference number: 5 (lower is better)
Translates to: LENIKELPTNPAHPKPSPVEGQK*GLPVAP
Trigger: GGGTGCCACAGGTAACCCCAATTTCTGGCCTTCAAC...AGGGCTAGGCTTGGGATGAGCTGGGTTTGTGGGGAGTTCCTTAATATTCTCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CAA 90 bp AAAGCCGCCCGTGGTGCATACAAAAAGGGCGGTTTATATAGTGTCAAAAGCTCCCCTCCCCAGGCAAAGTaGGCAGATGAGTGGCAGAGT +
Preference number: 5 (lower is better)
Translates to: KAARGAYKKGGLYSVKSSPPQAK*ADEWQS
Trigger: ACTCTGCCACTCATCTGCCAACTTTGCCTGGGGAGG...GGAGCTTTTGACACTATATAAACCGCCCTTTTTGTATGCACCACGGGCGGCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CAA 90 bp AGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTCCCCTGCCCTGTGTGCCCAGAACTaGAGAATATTAAGGAACTCC +
Preference number: 5 (lower is better)
Translates to: RDLAHHAVSFPLEMSSPALCAQN*RILRNS
Trigger: GGAGTTCCTTAATATTCTCAAGTTCTGGGCACACAG...GGCAGGGGAGGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CAA 90 bp CTTGAGAATATTAAGGAACTCCCCACAAACCCAGCTCATCCCAAGCCTAGCCCTTGCTGCTGCTCATCCTaGCTCTGCAGGCTCTTCACA +
Preference number: 5 (lower is better)
Translates to: LENIKELPTNPAHPKPSPCCCSS*LCRLFT
Trigger: TGTGAAGAGCCTGCAGAGCAAGGATGAGCAGCAGCA...AGGGCTAGGCTTGGGATGAGCTGGGTTTGTGGGGAGTTCCTTAATATTCTCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS CCA 90 bp CAGAAAAACTTAGGACCAACGCCCCTGAGATACAGATGGAAAGACTaGGTGCTGATAAAGGGAAAGCAGGCATCCAAGAGCAGGGAAGGC +
Preference number: 5 (lower is better)
Translates to: QKNLGPTPLRYRWKD*VLIKGKQASKSREG
Trigger: GCCTTCCCTGCTCTTGGATGCCTGCTTTCCCTTTATCAGCACCCAGTCTTTCCATCTGTATCTCAGGGGCGTTGGTCCTAAGTTTTTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493339.1
CDS-3UTR CAA 90 bp AAAGCCGCCCGTGGTGCATACAAAAAGGGCGGTTTATATAGTGTCAAAAGCTCCATGTTGAAGGAGGCGTaGGCACTGCGGGCTTCTTCT +
Preference number: 5 (lower is better)
Translates to: KAARGAYKKGGLYSVKSSMLKEA*ALRASS
Trigger: AGAAGAAGCCCGCAGTGCCAACGCCTCCTTCAACAT...GGAGCTTTTGACACTATATAAACCGCCCTTTTTGTATGCACCACGGGCGGCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CAA 90 bp CAGATGAGTGGCAGAGTTGGACCCGGTCAAGGGGAGAAGTTGAAGGCCAGAAATTCAATCCATTTGATGTaGAAGGAGGCGTTGGCACTG +
Preference number: 5 (lower is better)
Translates to: QMSGRVGPGQGEKLKARNSIHLM*KEALAL
Trigger: CAGTGCCAACGCCTCCTTCAACATCAAATGGATTGA...ATTTCTGGCCTTCAACTTCTCCCCTTGACCGGGTCCAACTCTGCCACTCATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CAA 90 bp CCAGAAATTGGGGTTACCTGTGGCACCCACACTGTCCCTGATAGAGGAAGAGGTTCAATCCATTTGATGTaGAAGGAGGCGTTGGCACTG +
Preference number: 5 (lower is better)
Translates to: PEIGVTCGTHTVPDRGRGSIHLM*KEALAL
Trigger: CAGTGCCAACGCCTCCTTCAACATCAAATGGATTGA...ACCTCTTCCTCTATCAGGGACAGTGTGGGTGCCACAGGTAACCCCAATTTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CAA 90 bp ATCTGCCTGCCCACCATGGGGCATCTCTCCATGTGTAAACACTTCCCACATCAGAGTGCATCTTATCACTaGTGCTGTGGCGTTTGTTGG +
Preference number: 5 (lower is better)
Translates to: ICLPTMGHLSMCKHFPHQSASYH*CCGVCW
Trigger: CCAACAAACGCCACAGCACAAGTGATAAGATGCACT...CTGATGTGGGAAGTGTTTACACATGGAGAGATGCCCCATGGTGGGCAGGCAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
CDS-3UTR CAA 90 bp TGTGTCCTCTATAATCCTGGTCTAGACCCCCAAGTGGGACCAGTGGGCCAAGAGTTTTCATCCTTGCTCTaGGAAATCCTCAGGAACTGC +
Preference number: 5 (lower is better)
Translates to: CVLYNPGLDPQVGPVGQEFSSLL*EILRNC
Trigger: GCAGTTCCTGAGGATTTCCAAGAGCAAGGATGAAAA...CTCTTGGCCCACTGGTCCCACTTGGGGGTCTAGACCAGGATTATAGAGGACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CAA 90 bp GGTCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTCCTCTATATTTTCATCCTTGCTCTaGGAAATCCTCAGGAACTGC +
Preference number: 5 (lower is better)
Translates to: GQCAQAQSGEDSLAVSSIFSSLL*EILRNC
Trigger: GCAGTTCCTGAGGATTTCCAAGAGCAAGGATGAAAA...TATAGAGGACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CAA 90 bp TGCCTGCCCACCATGGGGCATCTCTCCATGTGTAAACACTTCCCACATCAGCACTTTTCATCCTTGCTCTaGGAAATCCTCAGGAACTGC +
Preference number: 5 (lower is better)
Translates to: CLPTMGHLSMCKHFPHQHFSSLL*EILRNC
Trigger: GCAGTTCCTGAGGATTTCCAAGAGCAAGGATGAAAA...GTGCTGATGTGGGAAGTGTTTACACATGGAGAGATGCCCCATGGTGGGCAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000230418.8
ENST00000461389.1
ENST00000470019.5
CDS-3UTR CAA 90 bp CAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTTTTCATCCTTGCTCTaGGAAATCCTCAGGAACTGC +
Preference number: 5 (lower is better)
Translates to: QEDRDLAHHAVSFPLEMSFSSLL*EILRNC
Trigger: GCAGTTCCTGAGGATTTCCAAGAGCAAGGATGAAAA...GGACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000461389.1
ENST00000470019.5
ENST00000481273.5
ENST00000489707.5
CDS-3UTR CAA 90 bp TCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTCCTCTATAATTTATGCACAAAGCGGTaGTTGGACAGGTGCTCCATG +
Preference number: 5 (lower is better)
Translates to: SVCTSPEWGGLTCCVLYNLCTKR*LDRCSM
Trigger: CATGGAGCACCTGTCCAACAACCGCTTTGTGCATAA...ATTATAGAGGACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CAA 90 bp ACCAGTGGGCCAAGAGACTCATTAACCCTGTGTGCCCAGAACTTGAGAATATTACCTCCCCAGGCAAAGTaGGCAGATGAGTGGCAGAGT +
Preference number: 5 (lower is better)
Translates to: TSGPRDSLTLCAQNLRILPPQAK*ADEWQS
Trigger: ACTCTGCCACTCATCTGCCAACTTTGCCTGGGGAGG...TAATATTCTCAAGTTCTGGGCACACAGGGTTAATGAGTCTCTTGGCCCACTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CAA 90 bp ATGCCCACCCACCCCACGCTGCAATTACATATAAAAGCCGCCCGTGGTGCATACCTGTGTGCCCAGAACTaGAGAATATTAAGGAACTCC +
Preference number: 5 (lower is better)
Translates to: MPTHPTLQLHIKAARGAYLCAQN*RILRNS
Trigger: GGAGTTCCTTAATATTCTCAAGTTCTGGGCACACAG...GTATGCACCACGGGCGGCTTTTATATGTAATTGCAGCGTGGGGTGGGTGGGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CAA 90 bp CCAGGAGGACAGGGATCTTGCCCATCATGCTGTGAGCTTCCCTCTAGAGATGTCCTGTGTGCCCAGAACTaGAGAATATTAAGGAACTCC +
Preference number: 5 (lower is better)
Translates to: PGGQGSCPSCCELPSRDVLCAQN*RILRNS
Trigger: GGAGTTCCTTAATATTCTCAAGTTCTGGGCACACAG...GACATCTCTAGAGGGAAGCTCACAGCATGATGGGCAAGATCCCTGTCCTCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS TCA 90 bp TTCTTCAGCCAGGAGGGCACAGCTAGACAGACAGGAAGGAAACAGTaGAGGCTGCTTCACAGGTCTCCAAAACTAAAGGATCCATCTCCA +
Preference number: 5 (lower is better)
Translates to: FFSQEGTARQTGRKQ*RLLHRSPKLKDPSP
Trigger: TGGAGATGGATCCTTTAGTTTTGGAGACCTGTGAAGCAGCCTTCACTGTTTCCTTCCTGTCTGTCTAGCTGTGCCCTCCTGGCTGAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470471.1
CDS CCA 90 bp GAGAAGTCCCAGAAAAACTTAGGACCAACGCCCCTGAGATACAGATaGAAAGACTGGGTGCTGATAAAGGGAAAGCAGGCATCCAAGAGC +
Preference number: 5 (lower is better)
Translates to: EKSQKNLGPTPLRYR*KDWVLIKGKQASKS
Trigger: GCTCTTGGATGCCTGCTTTCCCTTTATCAGCACCCAGTCTTTCCATCTGTATCTCAGGGGCGTTGGTCCTAAGTTTTTCTGGGACTTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493339.1
CDS-3UTR CAA 90 bp CTTGAGAATATTAAGGAACTCCCCACAAACCCAGCTCATCCCAAGCCTAGCCCTCCTGCCTCAATCCATTaGATGTTGAAGGAGGCGTTG +
Preference number: 5 (lower is better)
Translates to: LENIKELPTNPAHPKPSPPASIH*MLKEAL
Trigger: CAACGCCTCCTTCAACATCAAATGGATTGAGGCAGG...AGGGCTAGGCTTGGGATGAGCTGGGTTTGTGGGGAGTTCCTTAATATTCTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CAA 90 bp CTGTACCCAGAGGACCATTTTTCTGTGAGGGCTGTCACTATTTCCTCTGGAGCATCACTTTCAGCAATATaGGCCAACACCAGCTCGTGG +
Preference number: 5 (lower is better)
Translates to: LYPEDHFSVRAVTISSGASLSAI*ANTSSW
Trigger: CCACGAGCTGGTGTTGGCCAATATTGCTGAAAGTGA...TGCTCCAGAGGAAATAGTGACAGCCCTCACAGAAAAATGGTCCTCTGGGTACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471863.5
CDS-3UTR CAA 90 bp CCAGAAATTGGGGTTACCTGTGGCACCCACACTGTCCCTGATAGAGGAAGAGGTTTTTCATCCTTGCTCTaGGAAATCCTCAGGAACTGC +
Preference number: 5 (lower is better)
Translates to: PEIGVTCGTHTVPDRGRGFSSLL*EILRNC
Trigger: GCAGTTCCTGAGGATTTCCAAGAGCAAGGATGAAAA...ACCTCTTCCTCTATCAGGGACAGTGTGGGTGCCACAGGTAACCCCAATTTCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CAA 90 bp AAAGCCGCCCGTGGTGCATACAAAAAGGGCGGTTTATATAGTGTCAAAAGCTCCATCCTCAGGAACTGCTaGAGGTCTCCCAGATCCACA +
Preference number: 5 (lower is better)
Translates to: KAARGAYKKGGLYSVKSSILRNC*RSPRST
Trigger: TGTGGATCTGGGAGACCTCAAGCAGTTCCTGAGGAT...GGAGCTTTTGACACTATATAAACCGCCCTTTTTGTATGCACCACGGGCGGCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CAA 90 bp TCTGTGAGGGCTGTCACTATTTCCTCTGGAGCACCCACCCTAACCCCTGTGCCTTTTCATCTACTTCATTaGACCTTTCCAACCACCTTG +
Preference number: 5 (lower is better)
Translates to: SVRAVTISSGAPTLTPVPFHLLH*TFPTTL
Trigger: CAAGGTGGTTGGAAAGGTCAAATGAAGTAGATGAAA...AGGCACAGGGGTTAGGGTGGGTGCTCCAGAGGAAATAGTGACAGCCCTCACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471863.5
CDS-3UTR CAA 90 bp AAGCTGATGATAAATGCATTCTGCCTGGCCCGTTTAACTGGAAATGGGAGAAGCGGCCGCCCTTTCCATTaGCACAAGCATGCAGCAGAT +
Preference number: 5 (lower is better)
Translates to: KLMINAFCLARLTGNGRSGRPFH*HKHAAD
Trigger: ATCTGCTGCATGCTTGTGCAAATGGAAAGGGCGGCC...GCTTCTCCCATTTCCAGTTAAACGGGCCAGGCAGAATGCATTTATCATCAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476760.1
CDS TCA 90 bp ACTAAAGGATCCATCTCCAAGAAATCCTACTACCATTCTAGGCCCTaGGTTCAGAAGCCCCATGCTCCTCAGATGGCAGGAGTTTCCCTT +
Preference number: 5 (lower is better)
Translates to: TKGSISKKSYYHSRP*VQKPHAPQMAGVSL
Trigger: AAGGGAAACTCCTGCCATCTGAGGAGCATGGGGCTTCTGAACTCAGGGCCTAGAATGGTAGTAGGATTTCTTGGAGATGGATCCTTTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470471.1
CDS-3UTR CAA 90 bp CACCGCGCCCAGCCTGATATAAAGGGTTTATCATGTGTACTTTCAGTCATATGTATGTTGAAGGAGGCGTaGGCACTGCGGGCTTCTTCT +
Preference number: 5 (lower is better)
Translates to: HRAQPDIKGLSCVLSVICMLKEA*ALRASS
Trigger: AGAAGAAGCCCGCAGTGCCAACGCCTCCTTCAACAT...ACATATGACTGAAAGTACACATGATAAACCCTTTATATCAGGCTGGGCGCGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471863.5
CDS-3UTR CAA 90 bp CTTGAGAATATTAAGGAACTCCCCACAAACCCAGCTCATCCCAAGCCTAGCCCTTCAATCCATTTGATGTaGAAGGAGGCGTTGGCACTG +
Preference number: 5 (lower is better)
Translates to: LENIKELPTNPAHPKPSPSIHLM*KEALAL
Trigger: CAGTGCCAACGCCTCCTTCAACATCAAATGGATTGA...AGGGCTAGGCTTGGGATGAGCTGGGTTTGTGGGGAGTTCCTTAATATTCTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
CDS-3UTR CAA 90 bp ACCAGTGGGCCAAGAGACTCATTAACCCTGTGTGCCCAGAACTTGAGAATATTATCCGTGTGCTTGATGTaGCAGCTGTTGCCTGCAATG +
Preference number: 5 (lower is better)
Translates to: TSGPRDSLTLCAQNLRILSVCLM*QLLPAM
Trigger: CATTGCAGGCAACAGCTGCAACATCAAGCACACGGA...TAATATTCTCAAGTTCTGGGCACACAGGGTTAATGAGTCTCTTGGCCCACTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000470019.5
CDS-3UTR CAA 90 bp TCAGTGTGCACAAGCCCAGAGTGGGGAGGACTCACTTGCTGTGTCCTCTATAATTTTTCATCCTTGCTCTaGGAAATCCTCAGGAACTGC +
Preference number: 5 (lower is better)
Translates to: SVCTSPEWGGLTCCVLYNFSSLL*EILRNC
Trigger: GCAGTTCCTGAGGATTTCCAAGAGCAAGGATGAAAA...ATTATAGAGGACACAGCAAGTGAGTCCTCCCCACTCTGGGCTTGTGCACACTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CAA 90 bp GAAGTTGAAGGCCAGAAATTGGGGTTACCTGTGGCACCCACACTGTCCCTGATACTGTGTGCCCAGAACTaGAGAATATTAAGGAACTCC +
Preference number: 5 (lower is better)
Translates to: EVEGQKLGLPVAPTLSLILCAQN*RILRNS
Trigger: GGAGTTCCTTAATATTCTCAAGTTCTGGGCACACAG...TATCAGGGACAGTGTGGGTGCCACAGGTAACCCCAATTTCTGGCCTTCAACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CAA 90 bp ACCAGTGGGCCAAGAGACTCATTAACCCTGTGTGCCCAGAACTTGAGAATATTAATCCTCAGGAACTGCTaGAGGTCTCCCAGATCCACA +
Preference number: 5 (lower is better)
Translates to: TSGPRDSLTLCAQNLRILILRNC*RSPRST
Trigger: TGTGGATCTGGGAGACCTCAAGCAGTTCCTGAGGAT...TAATATTCTCAAGTTCTGGGCACACAGGGTTAATGAGTCTCTTGGCCCACTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000489707.5
CDS-3UTR CAA 90 bp AAGCTGATGATAAATGCATTCTGCCTGGCCCGTTTAACTGGAAATGGGAGAAGCCCCTGGCTCTCACATTaGATGTTGAAGGAGGCGTTG +
Preference number: 5 (lower is better)
Translates to: KLMINAFCLARLTGNGRSPWLSH*MLKEAL
Trigger: CAACGCCTCCTTCAACATCAAATGTGAGAGCCAGGG...GCTTCTCCCATTTCCAGTTAAACGGGCCAGGCAGAATGCATTTATCATCAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476760.1
CDS TCA 90 bp ACAAACCCACGTTATTTGTTAAGCTTCCCAAGTGACTTGATAATGTaGGCCAGGCCCCGGAGAGCAGCATTTGGGAGCTTCAGGTTTAGA +
Preference number: 5 (lower is better)
Translates to: TNPRYLLSFPSDLIM*ARPRRAAFGSFRFR
Trigger: TCTAAACCTGAAGCTCCCAAATGCTGCTCTCCGGGGCCTGGCTCACATTATCAAGTCACTTGGGAAGCTTAACAAATAACGTGGGTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487673.5
ENST00000493339.1
CDS CCA 90 bp AGAGCAGCATTTGGGAGCTTCAGGTTTAGAATTCCAGGCACTGCCTaGCACAGAGCAGGTTTTTCAATAAGCAGATCTGTAGAAGGGATC +
Preference number: 5 (lower is better)
Translates to: RAAFGSFRFRIPGTA*HRAGFSISRSVEGI
Trigger: GATCCCTTCTACAGATCTGCTTATTGAAAAACCTGCTCTGTGCCAGGCAGTGCCTGGAATTCTAAACCTGAAGCTCCCAAATGCTGCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000487673.5
ENST00000493339.1
CDS CCA 90 bp GTAACACTCATGTCACAAGTGGTGCTAGGAAGGAGGGAGGCAAAGTaGGTTCTGATATATTTATTCTCAAGTGGGGACAAGCTTTTGGGG +
Preference number: 5 (lower is better)
Translates to: VTLMSQVVLGRREAK*VLIYLFSSGDKLLG
Trigger: CCCCAAAAGCTTGTCCCCACTTGAGAATAAATATATCAGAACCCACTTTGCCTCCCTCCTTCCTAGCACCACTTGTGACATGAGTGTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493339.1
CDS-3UTR CAA 90 bp CCTGATATAAAGGGTTTATCATGTGTACTTTCAGTCATATGTCTTGCTTTTCTCCCCATCTCGGAACCATaGGTAGGTGGGCCGAGGGTG +
Preference number: 5 (lower is better)
Translates to: PDIKGLSCVLSVICLAFLPISEP*VGGPRV
Trigger: CACCCTCGGCCCACCTACCAATGGTTCCGAGATGGG...GAGAAAAGCAAGACATATGACTGAAAGTACACATGATAAACCCTTTATATCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471863.5
CDS CCA 72 bp GGGCCTAGCCTCTCCCACAGTGGGGACCCACCCACCTaGGCTGGGCACGAGACCCGGTTCTGCTGTGACCCC +
Preference number: 6 (lower is better)
Translates to: GPSLSHSGDPPT*AGHETRFCCDP
Trigger: GGGGTCACAGCAGAACCGGGTCTCGTGCCCAGCCCAGGTGGGTGGGTCCCCACTGTGGGAGAGGCTAGGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493339.1
CDS CCA 72 bp AGCCGGTCCACAGCTGCAAAGCTCAGGCTGCTGCCCTaGGCGAAACGCCGCTCCGTGTCCTGGACAGGGGCC +
Preference number: 6 (lower is better)
Translates to: SRSTAAKLRLLP*AKRRSVSWTGA
Trigger: GGCCCCTGTCCAGGACACGGAGCGGCGTTTCGCCCAGGGCAGCAGCCTGAGCTTTGCAGCTGTGGACCGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000471863.5
ENST00000476760.1
ENST00000481273.5
ENST00000487673.5
CDS CAA 90 bp AGCAGCGCCCGGCGCCCCTGCAGTGCATCCTGGGAGGACGGCTGCTaGATGAAGACAATGGCTGTCTGGGTACCGCCCAGCAGCGGCAGC +
Preference number: 6 (lower is better)
Translates to: SSARRPCSASWEDGC*MKTMAVWVPPSSGS
Trigger: GCTGCCGCTGCTGGGCGGTACCCAGACAGCCATTGTCTTCATCAAGCAGCCGTCCTCCCAGGATGCACTGCAGGGGCGCCGGGCGCTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000471863.5
ENST00000476760.1
ENST00000487673.5
CDS CAA 90 bp AGCAGCGCCCGGCGCCCCTGCAGTGCATCCTGGGAGGACGGCTGCTaGATGAAGACAATGGCTGTCTGGGTACCTGGGCCGACCCTGCCG +
Preference number: 6 (lower is better)
Translates to: SSARRPCSASWEDGC*MKTMAVWVPGPTLP
Trigger: CGGCAGGGTCGGCCCAGGTACCCAGACAGCCATTGTCTTCATCAAGCAGCCGTCCTCCCAGGATGCACTGCAGGGGCGCCGGGCGCTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481273.5
CDS GCA 72 bp GCCTCAACCTCACAGCGAAGCAGCGCCCGGCGCCCCTaGAGTGCATCCTGGGAGGACGGCTGCTTGATGAAG +
Preference number: 6 (lower is better)
Translates to: ASTSQRSSARRP*SASWEDGCLMK
Trigger: CTTCATCAAGCAGCCGTCCTCCCAGGATGCACTGCAGGGGCGCCGGGCGCTGCTTCGCTGTGAGGTTGAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000471863.5
ENST00000476760.1
ENST00000481273.5
ENST00000487673.5
CDS GCA 72 bp CTGGAAGGTGCCAGAGTCCTGCAGCCGGTCCACAGCTaGAAAGCTCAGGCTGCTGCCCTGGGCGAAACGCCG +
Preference number: 6 (lower is better)
Translates to: LEGARVLQPVHS*KAQAAALGETP
Trigger: CGGCGTTTCGCCCAGGGCAGCAGCCTGAGCTTTGCAGCTGTGGACCGGCTGCAGGACTCTGGCACCTTCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000471863.5
ENST00000476760.1
ENST00000481273.5
ENST00000487673.5
CDS GCA 72 bp GGGAGGCTGCTCCCATCCAGCACTTGGACACGGGCTTaGGCCTCGATGCTGCCGGCTGGGGTGCTGCTCATA +
Preference number: 6 (lower is better)
Translates to: GRLLPSSTWTRA*ASMLPAGVLLI
Trigger: TATGAGCAGCACCCCAGCCGGCAGCATCGAGGCGCAAGCCCGTGTCCAAGTGCTGGATGGGAGCAGCCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000345201.6
CDS CCA 72 bp AGGCTGCTGCCCTGGGCGAAACGCCGCTCCGTGTCCTaGACAGGGGCCCCATCGAGCAGCCAGTACACATGT +
Preference number: 6 (lower is better)
Translates to: RLLPWAKRRSVS*TGAPSSSQYTC
Trigger: ACATGTGTACTGGCTGCTCGATGGGGCCCCTGTCCAGGACACGGAGCGGCGTTTCGCCCAGGGCAGCAGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000471863.5
ENST00000476760.1
ENST00000481273.5
ENST00000487673.5
CDS CAA 72 bp TGGGAGGCTGCTCCCATCCAGCACTTGGACACGGGCTaGCGCCTCGATGCTGCCGGCTGGGGTGCTGCTCAT +
Preference number: 6 (lower is better)
Translates to: WEAAPIQHLDTG*RLDAAGWGAAH
Trigger: ATGAGCAGCACCCCAGCCGGCAGCATCGAGGCGCAAGCCCGTGTCCAAGTGCTGGATGGGAGCAGCCTCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000345201.6
CDS TCA 72 bp ACCCACCTGGGCTGGGCACGAGACCCGGTTCTGCTGTaGCCCCCTCCCTCCTTAGGCTTCAGTGTCTGCAGC +
Preference number: 6 (lower is better)
Translates to: THLGWARDPVLL*PPPSLGFSVCS
Trigger: GCTGCAGACACTGAAGCCTAAGGAGGGAGGGGGTCACAGCAGAACCGGGTCTCGTGCCCAGCCCAGGTGGGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493339.1
CDS CCA 72 bp CAGCGAAGCAGCGCCCGGCGCCCCTGCAGTGCATCCTaGGAGGACGGCTGCTTGATGAAGACAATGGCTGTC +
Preference number: 6 (lower is better)
Translates to: QRSSARRPCSAS*EDGCLMKTMAV
Trigger: GACAGCCATTGTCTTCATCAAGCAGCCGTCCTCCCAGGATGCACTGCAGGGGCGCCGGGCGCTGCTTCGCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000471863.5
ENST00000476760.1
ENST00000481273.5
ENST00000487673.5
CDS CCA 72 bp CCGGCACAGGCTTGTCTTTCCACTGAATCAGCGGCTTaGGGTCCCCCTGGGCCTCGCACTGCAGTAGGGCTG +
Preference number: 6 (lower is better)
Translates to: PAQACLSTESAA*GPPGPRTAVGL
Trigger: CAGCCCTACTGCAGTGCGAGGCCCAGGGGGACCCCAAGCCGCTGATTCAGTGGAAAGACAAGCCTGTGCCGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352931.6
CDS GCA 72 bp TCCCATCCAGCACTTGGACACGGGCTTGCGCCTCGATaGTGCCGGCTGGGGTGCTGCTCATACAACGGTACC +
Preference number: 6 (lower is better)
Translates to: SHPALGHGLAPR*CRLGCCSYNGT
Trigger: GGTACCGTTGTATGAGCAGCACCCCAGCCGGCAGCATCGAGGCGCAAGCCCGTGTCCAAGTGCTGGATGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000345201.6
CDS CCA 72 bp AATGGCTGTCTGGGTACCTGGGCCGACCCTGCCGGGTaGGGTGGGGAATTCCTTTTTCTCCATCGCGCTCCC +
Preference number: 6 (lower is better)
Translates to: NGCLGTWADPAG*GGEFLFLHRAP
Trigger: GGGAGCGCGATGGAGAAAAAGGAATTCCCCACCCCACCCGGCAGGGTCGGCCCAGGTACCCAGACAGCCATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481273.5
CDS CAA 90 bp CCAGCGTCATCTCGAGTCACCCGGGCAAAATGCAGGGTCCCAGCGTaGTCTGTCACCCACTCTGGGAGGCTGCTCCCATCCAGCACTTGG +
Preference number: 6 (lower is better)
Translates to: PASSRVTRAKCRVPA*SVTHSGRLLPSSTW
Trigger: CCAAGTGCTGGATGGGAGCAGCCTCCCAGAGTGGGTGACAGACAACGCTGGGACCCTGCATTTTGCCCGGGTGACTCGAGATGACGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000345201.6
CDS CAA 90 bp CCAGCGTCATCTCGAGTCACCCGGGCAAAATGCAGGGTCCCAGCGTaGTCTGTCACCCACTCTGGGAGGCTGCTCCCATTGGCCACAGTG +
Preference number: 6 (lower is better)
Translates to: PASSRVTRAKCRVPA*SVTHSGRLLPLATV
Trigger: CACTGTGGCCAATGGGAGCAGCCTCCCAGAGTGGGTGACAGACAACGCTGGGACCCTGCATTTTGCCCGGGTGACTCGAGATGACGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349241.6
CDS GCA 72 bp AAAGCACTGTGGGCGCAGCAGGAATACAGCCCACTATaGTCAGGACCAGCTGGCCGGAGCGTCAGGTTCCGC +
Preference number: 6 (lower is better)
Translates to: KALWAQQEYSPL*SGPAGRSVRFR
Trigger: GCGGAACCTGACGCTCCGGCCAGCTGGTCCTGAGCATAGTGGGCTGTATTCCTGCTGCGCCCACAGTGCTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000471863.5
ENST00000481273.5
ENST00000487673.5
CDS GCA 72 bp CATCCAGCACTTGGACACGGGCTTGCGCCTCGATGCTaGCGGCTGGGGTGCTGCTCATACAACGGTACCATG +
Preference number: 6 (lower is better)
Translates to: HPALGHGLAPRC*RLGCCSYNGTM
Trigger: CATGGTACCGTTGTATGAGCAGCACCCCAGCCGGCAGCATCGAGGCGCAAGCCCGTGTCCAAGTGCTGGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000345201.6
CDS CCA 72 bp GCAGCAGGAATACAGCCCACTATGCTCAGGACCAGCTaGCCGGAGCGTCAGGTTCCGCTCCTTGCTGCTGAC +
Preference number: 6 (lower is better)
Translates to: AAGIQPTMLRTS*PERQVPLLAAD
Trigger: GTCAGCAGCAAGGAGCGGAACCTGACGCTCCGGCCAGCTGGTCCTGAGCATAGTGGGCTGTATTCCTGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000471863.5
ENST00000481273.5
ENST00000487673.5
CDS CAA 72 bp TCTCGAGTCACCCGGGCAAAATGCAGGGTCCCAGCGTaGTCTGTCACCCACTCTGGGAGGCTGCTCCCATCC +
Preference number: 6 (lower is better)
Translates to: SRVTRAKCRVPA*SVTHSGRLLPS
Trigger: GGATGGGAGCAGCCTCCCAGAGTGGGTGACAGACAACGCTGGGACCCTGCATTTTGCCCGGGTGACTCGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000345201.6
CDS TCA 72 bp TGGGCCGAGGGTGCCCATCAATGTGGCAACGAAGTGTaGCCTGGGTCTGTGGCTGGATCTCAGCTTCCGAGG +
Preference number: 6 (lower is better)
Translates to: WAEGAHQCGNEV*PGSVAGSQLPR
Trigger: CCTCGGAAGCTGAGATCCAGCCACAGACCCAGGTCACACTTCGTTGCCACATTGATGGGCACCCTCGGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000471863.5
ENST00000481273.5
ENST00000487673.5
CDS GCA 72 bp GACACTGCCCTCCCTACCCGAGACCCCCACGTCCCCTaGCAACAGCATACCAGATCCACATATTCCAGCACC +
Preference number: 6 (lower is better)
Translates to: DTALPTRDPHVP*QQHTRSTYSST
Trigger: GGTGCTGGAATATGTGGATCTGGTATGCTGTTGGCAGGGGACGTGGGGGTCTCGGGTAGGGAGGGCAGTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493339.1
CDS CAA 72 bp TCTCGAGTCACCCGGGCAAAATGCAGGGTCCCAGCGTaGTCTGTCACCCACTCTGGGAGGCTGCTCCCATTG +
Preference number: 6 (lower is better)
Translates to: SRVTRAKCRVPA*SVTHSGRLLPL
Trigger: CAATGGGAGCAGCCTCCCAGAGTGGGTGACAGACAACGCTGGGACCCTGCATTTTGCCCGGGTGACTCGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349241.6
CDS TCA 72 bp GCCCACCTGGGAAGGAGGAGGACAAGAGCGTCACGATaGGACCTGACACTCTGGCCACCATGGGGATTTCTG +
Preference number: 6 (lower is better)
Translates to: AHLGRRRTRASR*DLTLWPPWGFL
Trigger: CAGAAATCCCCATGGTGGCCAGAGTGTCAGGTCTCATCGTGACGCTCTTGTCCTCCTCCTTCCCAGGTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461389.1
ENST00000473339.1
CDS GCA 72 bp GTCAAGGCCACTTCTTCTTGGATCTCTGCTGAGGGCTaGCCGTTCTGCAAAGGCCCACCTGGGAAGGAGGAG +
Preference number: 6 (lower is better)
Translates to: VKATSSWISAEG*PFCKGPPGKEE
Trigger: CTCCTCCTTCCCAGGTGGGCCTTTGCAGAACGGGCAGCCCTCAGCAGAGATCCAAGAAGAAGTGGCCTTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461389.1
ENST00000473339.1
CDS CCA 72 bp GACCTGGGTCTGTGGCTGGATCTCAGCTTCCGAGGCTaGATGCTTCAGGACCACAGGACCTGCCTCAATCCA +
Preference number: 6 (lower is better)
Translates to: DLGLWLDLSFRG*MLQDHRTCLNP
Trigger: TGGATTGAGGCAGGTCCTGTGGTCCTGAAGCATCCAGCCTCGGAAGCTGAGATCCAGCCACAGACCCAGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000471863.5
ENST00000481273.5
ENST00000487673.5
CDS CCA 72 bp CGAGGGTGCCCATCAATGTGGCAACGAAGTGTGACCTaGGTCTGTGGCTGGATCTCAGCTTCCGAGGCTGGA +
Preference number: 6 (lower is better)
Translates to: RGCPSMWQRSVT*VCGWISASEAG
Trigger: TCCAGCCTCGGAAGCTGAGATCCAGCCACAGACCCAGGTCACACTTCGTTGCCACATTGATGGGCACCCTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000471863.5
ENST00000481273.5
ENST00000487673.5
CDS CAA 90 bp GCCTCTGTCCATCACACCCAGACCTGTGTTCCCCTCCACCTCTCCTaGACCTTCAGGGCAAAGGTGCTCACTGGCCACAGTGATGTTGAC +
Preference number: 6 (lower is better)
Translates to: ASVHHTQTCVPLHLS*TFRAKVLTGHSDVD
Trigger: GTCAACATCACTGTGGCCAGTGAGCACCTTTGCCCTGAAGGTCAAGGAGAGGTGGAGGGGAACACAGGTCTGGGTGTGATGGACAGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471863.5
ENST00000481946.5
CDS TCA 72 bp CAAGCTGGTCAAGGCCACTTCTTCTTGGATCTCTGCTaGGGGCTGCCCGTTCTGCAAAGGCCCACCTGGGAA +
Preference number: 6 (lower is better)
Translates to: QAGQGHFFLDLC*GLPVLQRPTWE
Trigger: TTCCCAGGTGGGCCTTTGCAGAACGGGCAGCCCTCAGCAGAGATCCAAGAAGAAGTGGCCTTGACCAGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461389.1
ENST00000473339.1
CDS CAA 72 bp CATCACACCCAGACCTGTGTTCCCCTCCACCTCTCCTaGACCTTCAGGGCAAAGGTGCTCACTGGCCACAGT +
Preference number: 6 (lower is better)
Translates to: HHTQTCVPLHLS*TFRAKVLTGHS
Trigger: ACTGTGGCCAGTGAGCACCTTTGCCCTGAAGGTCAAGGAGAGGTGGAGGGGAACACAGGTCTGGGTGTGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471863.5
ENST00000481946.5
CDS TCA 72 bp TTCATCGAGGGTGCCCATCAATGTGGCAACGAAGTGTaGCCTGGGTCTGTGGCTGGATCTCAGCTTCCGAGG +
Preference number: 6 (lower is better)
Translates to: FIEGAHQCGNEV*PGSVAGSQLPR
Trigger: CCTCGGAAGCTGAGATCCAGCCACAGACCCAGGTCACACTTCGTTGCCACATTGATGGGCACCCTCGATGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470019.5
CDS GCA 72 bp TGGGTCTGTGGCTGGATCTCAGCTTCCGAGGCTGGATaGTTCAGGACCACAGGACCTGCCTCAATCCATTTG +
Preference number: 6 (lower is better)
Translates to: WVCGWISASEAG*FRTTGPASIHL
Trigger: CAAATGGATTGAGGCAGGTCCTGTGGTCCTGAAGCATCCAGCCTCGGAAGCTGAGATCCAGCCACAGACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000471863.5
ENST00000481273.5
ENST00000487673.5
CDS CCA 72 bp TCAATGTGGCAACGAAGTGTGACCTGGGTCTGTGGCTaGATCTCAGCTTCCGAGGCTGGATGCTTCAGGACC +
Preference number: 6 (lower is better)
Translates to: SMWQRSVTWVCG*ISASEAGCFRT
Trigger: GGTCCTGAAGCATCCAGCCTCGGAAGCTGAGATCCAGCCACAGACCCAGGTCACACTTCGTTGCCACATTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000471863.5
ENST00000481273.5
ENST00000487673.5
CDS CCA 72 bp CCCATCAATGTGGCAACGAAGTGTGACCTGGGTCTGTaGCTGGATCTCAGCTTCCGAGGCTGGATGCTTCAG +
Preference number: 6 (lower is better)
Translates to: PINVATKCDLGL*LDLSFRGWMLQ
Trigger: CTGAAGCATCCAGCCTCGGAAGCTGAGATCCAGCCACAGACCCAGGTCACACTTCGTTGCCACATTGATGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000470019.5
ENST00000471863.5
ENST00000481273.5
ENST00000487673.5
CDS CCA 72 bp TCTCCCCAGCGTGGTGATGGGCTGCAGGCTAGACCGTaGGAAGTGCATCTTATCACTTGTGCTGTGGCGTTT +
Preference number: 6 (lower is better)
Translates to: SPQRGDGLQARP*EVHLITCAVAF
Trigger: AAACGCCACAGCACAAGTGATAAGATGCACTTCCCACGGTCTAGCCTGCAGCCCATCACCACGCTGGGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000461389.1
CDS CCA 72 bp AAAATGCAGGGTCCCAGCGTTGTCTGTCACCCACTCTaGGAGGCTGCTCCCATTGGCCACAGTGATGTTGAC +
Preference number: 6 (lower is better)
Translates to: KMQGPSVVCHPL*EAAPIGHSDVD
Trigger: GTCAACATCACTGTGGCCAATGGGAGCAGCCTCCCAGAGTGGGTGACAGACAACGCTGGGACCCTGCATTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349241.6
CDS CCA 72 bp CTCCTCCCAACCCCATCAACAGGGCAACTTAACAGATaGCCCGGGAGGGTCACCACCTTCACTGGCTTTAAC +
Preference number: 6 (lower is better)
Translates to: LLPTPSTGQLNR*PGRVTTFTGFN
Trigger: GTTAAAGCCAGTGAAGGTGGTGACCCTCCCGGGCCATCTGTTAAGTTGCCCTGTTGATGGGGTTGGGAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487673.5
ENST00000493339.1
CDS TCA 72 bp TGGGAAGGAGGAGGACAAGAGCGTCACGATGAGACCTaGCACTCTGGCCACCATGGGGATTTCTGTTCTGTC +
Preference number: 6 (lower is better)
Translates to: WEGGGQERHDET*HSGHHGDFCSV
Trigger: GACAGAACAGAAATCCCCATGGTGGCCAGAGTGTCAGGTCTCATCGTGACGCTCTTGTCCTCCTCCTTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461389.1
ENST00000473339.1
CDS TCA 72 bp GCTCTCTACTGTCTACACCGACTCCCAGTAGTGAACTaGTTCCCAAGCCTGCAGGGCCCAGAACTGAGAGGA +
Preference number: 6 (lower is better)
Translates to: ALYCLHRLPVVN*FPSLQGPELRG
Trigger: TCCTCTCAGTTCTGGGCCCTGCAGGCTTGGGAATCAGTTCACTACTGGGAGTCGGTGTAGACAGTAGAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471863.5
CDS TCA 72 bp TGTGCCATGTTCTGTACACAGGGGCTGAGTACAAGGTaGCAAACGTCTGGGCCCACCACTTCCTGTGCAGCA +
Preference number: 6 (lower is better)
Translates to: CAMFCTQGLSTR*QTSGPTTSCAA
Trigger: TGCTGCACAGGAAGTGGTGGGCCCAGACGTTTGTCACCTTGTACTCAGCCCCTGTGTACAGAACATGGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487673.5
CDS GCA 72 bp AGAAGGAAGCTGACACTCCAGACTGGTGTGTGTGCCTaGATACACTTGCTCAGGTGCACGTGCAGGTGTGTG +
Preference number: 6 (lower is better)
Translates to: RRKLTLQTGVCA*IHLLRCTCRCV
Trigger: CACACACCTGCACGTGCACCTGAGCAAGTGTATGCAGGCACACACACCAGTCTGGAGTGTCAGCTTCCTTCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490710.1
CDS CCA 72 bp CATACCCAGCGTGGTGATGGGCTGCAGGCTAGACCGTaGGAAGTGCATCTTATCACTTGTGCTGTGGCGTTT +
Preference number: 6 (lower is better)
Translates to: HTQRGDGLQARP*EVHLITCAVAF
Trigger: AAACGCCACAGCACAAGTGATAAGATGCACTTCCCACGGTCTAGCCTGCAGCCCATCACCACGCTGGGTATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493339.1
CDS CCA 72 bp GCAAAGCTTTCATCAGCAATGCTCAAGGTGAAGTTCTaGCTGCTGCAAGCCTGGCCAAAAGCACTGTGGGCG +
Preference number: 6 (lower is better)
Translates to: AKLSSAMLKVKF*LLQAWPKALWA
Trigger: CGCCCACAGTGCTTTTGGCCAGGCTTGCAGCAGCCAGAACTTCACCTTGAGCATTGCTGATGAAAGCTTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000230418.8
ENST00000230419.9
ENST00000345201.6
ENST00000349241.6
ENST00000352931.6
ENST00000471863.5
ENST00000481273.5
ENST00000487673.5
CDS CCA 72 bp CACTCTGGCCACCATGGGGATTTCTGTTCTGTCCCCTaGTCTTCCACTCTTGCCAACTTGGGTCCAATCACA +
Preference number: 6 (lower is better)
Translates to: HSGHHGDFCSVP*SSTLANLGPIT
Trigger: TGTGATTGGACCCAAGTTGGCAAGAGTGGAAGACCAGGGGACAGAACAGAAATCCCCATGGTGGCCAGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461389.1
ENST00000473339.1
CDS GCA 72 bp TGTAGTCAAGGCAACATACCCAGCGTGGTGATGGGCTaGAGGCTAGACCGTGGGAAGTGCATCTTATCACTT +
Preference number: 6 (lower is better)
Translates to: CSQGNIPSVVMG*RLDRGKCILSL
Trigger: AAGTGATAAGATGCACTTCCCACGGTCTAGCCTGCAGCCCATCACCACGCTGGGTATGTTGCCTTGACTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493339.1
CDS CCA 72 bp ACTCCCCCACAACACACACACACACACACCGACCGTTaGATGTTAAATAAACGACAGCCCGGCTCTGAGCAA +
Preference number: 6 (lower is better)
Translates to: TPPQHTHTHTDR*MLNKRQPGSEQ
Trigger: TTGCTCAGAGCCGGGCTGTCGTTTATTTAACATCCAACGGTCGGTGTGTGTGTGTGTGTGTTGTGGGGGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000487673.5
ENST00000493339.1
CDS TCA 72 bp TCCATCTCCAAGAAATCCTACTACCATTCTAGGCCCTaGGTTCAGAAGCCCCATGCTCCTCAGATGGCAGGA +
Preference number: 6 (lower is better)
Translates to: SISKKSYYHSRP*VQKPHAPQMAG
Trigger: TCCTGCCATCTGAGGAGCATGGGGCTTCTGAACTCAGGGCCTAGAATGGTAGTAGGATTTCTTGGAGATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470471.1
CDS TCA 72 bp AAAATGGCTTCTGTGCCATGTTCTGTACACAGGGGCTaGGTACAAGGTGACAAACGTCTGGGCCCACCACTT +
Preference number: 6 (lower is better)
Translates to: KMASVPCSVHRG*VQGDKRLGPPL
Trigger: AAGTGGTGGGCCCAGACGTTTGTCACCTTGTACTCAGCCCCTGTGTACAGAACATGGCACAGAAGCCATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487673.5
CDS GCA 72 bp AATTTTTCATCCTTGCTCTTGGAAATCCTCAGGAACTaGTTGAGGTCTCCCCAGCGTGGTGATGGGCTGCAG +
Preference number: 6 (lower is better)
Translates to: NFSSLLLEILRN*LRSPQRGDGLQ
Trigger: CTGCAGCCCATCACCACGCTGGGGAGACCTCAAGCAGTTCCTGAGGATTTCCAAGAGCAAGGATGAAAAATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230418.8
ENST00000461389.1
CDS CCA 72 bp ACAAAATCTGCACGAAGGGCAGTGAATAACAGGCTCTaGGGCCACACTGGGCTAGATCTCTACCTATGCTTC +
Preference number: 6 (lower is better)
Translates to: TKSARRAVNNRL*GHTGLDLYLCF
Trigger: GAAGCATAGGTAGAGATCTAGCCCAGTGTGGCCCCAGAGCCTGTTATTCACTGCCCTTCGTGCAGATTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493339.1
CDS TCA 72 bp CAGGAGGGCACAGCTAGACAGACAGGAAGGAAACAGTaGAGGCTGCTTCACAGGTCTCCAAAACTAAAGGAT +
Preference number: 6 (lower is better)
Translates to: QEGTARQTGRKQ*RLLHRSPKLKD
Trigger: ATCCTTTAGTTTTGGAGACCTGTGAAGCAGCCTTCACTGTTTCCTTCCTGTCTGTCTAGCTGTGCCCTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470471.1
CDS GCA 72 bp GTTAATGGAAAGACTGATAGGACTCCTGCCCGCTCTTaGCCCAGAACTAGGGATTTGAGAAGCAGCAGTTTG +
Preference number: 6 (lower is better)
Translates to: VNGKTDRTPARS*PRTRDLRSSSL
Trigger: CAAACTGCTGCTTCTCAAATCCCTAGTTCTGGGGCAAGAGCGGGCAGGAGTCCTATCAGTCTTTCCATTAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493339.1
CDS CCA 72 bp CAGAAAAACTTAGGACCAACGCCCCTGAGATACAGATaGAAAGACTGGGTGCTGATAAAGGGAAAGCAGGCA +
Preference number: 6 (lower is better)
Translates to: QKNLGPTPLRYR*KDWVLIKGKQA
Trigger: TGCCTGCTTTCCCTTTATCAGCACCCAGTCTTTCCATCTGTATCTCAGGGGCGTTGGTCCTAAGTTTTTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493339.1
CDS CCA 72 bp AACACCTCGAACCGTGAGTCCTCTGAGATGAGCATCTaGTTTCTGTACCAGACAACTGTAGGTTTTGGTGTG +
Preference number: 6 (lower is better)
Translates to: NTSNRESSEMSI*FLYQTTVGFGV
Trigger: CACACCAAAACCTACAGTTGTCTGGTACAGAAACCAGATGCTCATCTCAGAGGACTCACGGTTCGAGGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489707.5