Pregenerated sensors for PTGER2 (Homo sapiens)
Ensembl gene IDs: ENSG00000125384Ensembl transcript IDs: ENST00000245457.6, ENST00000557436.1
Found 93 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGGATCTTCAATGCAGCCGATTGTTCCTCCAAAGGCCAAGTACCATaGTCACTGAGGGTAGGTTTTGTAGCTCCTTCTGACACTTTACAT | + |
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Preference number: 1 (lower is better) Translates to: WIFNAADCSSKGQVP*SLRVGFVAPSDTLH Trigger: ATGTAAAGTGTCAGAAGGAGCTACAAAACCTACCCTCAGTGAGCATGGTACTTGGCCTTTGGAGGAACAATCGGCTGCATTGAAGATCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000245457.6 |
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| 3UTR TCA 90 bp | GCCTATGATTTTCAACTTCATTGTTCAAATAAAGGGTTCGCTAAGTaGTCACAAGACAGCAGGCTTGGTTGCTTCCACATATTGACTTCC | + |
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Preference number: 1 (lower is better) Translates to: AYDFQLHCSNKGFAK*SQDSRLGCFHILTS Trigger: GGAAGTCAATATGTGGAAGCAACCAAGCCTGCTGTCTTGTGATCACTTAGCGAACCCTTTATTTGAACAATGAAGTTGAAAATCATAGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000245457.6 |
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| 3UTR-3UTR TCA 90 bp | GTTTTTAAGCCTAATATTTGGCTTCATACATGGCCACGTACATCCTCCCCCAGAAAAGGGTTCGCTAAGTaGTCACAAGACAGCAGGCTT | + |
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Preference number: 2 (lower is better) Translates to: VFKPNIWLHTWPRTSSPRKGFAK*SQDSRL Trigger: AAGCCTGCTGTCTTGTGATCACTTAGCGAACCCTTT...TCTGGGGGAGGATGTACGTGGCCATGTATGAAGCCAAATATTAGGCTTAAAAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000245457.6 |
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| 3UTR-3UTR GCA 90 bp | AAGCCTAATATTTGGCTTCATACATGGCCACGTACATCCTCCCCCAGAAATAGGAAAGGCCAAGTACCATaGTCACTGAGGGTAGGTTTT | + |
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Preference number: 2 (lower is better) Translates to: KPNIWLHTWPRTSSPRNRKGQVP*SLRVGF Trigger: AAAACCTACCCTCAGTGAGCATGGTACTTGGCCTTT...CCTATTTCTGGGGGAGGATGTACGTGGCCATGTATGAAGCCAAATATTAGGCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000245457.6 |
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| 3UTR-3UTR CCA 90 bp | GTTTTTAAGCCTAATATTTGGCTTCATACATGGCCACGTACATCCTCCCCCAGATTGACCTGCAGTTCCTaGAGGATGAGTAAACAAAAC | + |
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Preference number: 2 (lower is better) Translates to: VFKPNIWLHTWPRTSSPRLTCSS*RMSKQN Trigger: GTTTTGTTTACTCATCCTCCAGGAACTGCAGGTCAA...TCTGGGGGAGGATGTACGTGGCCATGTATGAAGCCAAATATTAGGCTTAAAAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000245457.6 |
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| 3UTR-3UTR TCA 90 bp | GTTTTTAAGCCTAATATTTGGCTTCATACATGGCCACGTACATCCTCCCCCAGAGTTGCTTCCACATATTaGCTTCCTAGAGATTACATA | + |
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Preference number: 2 (lower is better) Translates to: VFKPNIWLHTWPRTSSPRVASTY*LPRDYI Trigger: TATGTAATCTCTAGGAAGTCAATATGTGGAAGCAAC...TCTGGGGGAGGATGTACGTGGCCATGTATGAAGCCAAATATTAGGCTTAAAAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000245457.6 |
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| 3UTR-3UTR GCA 90 bp | AATATTTGGCTTCATACATGGCCACGTACATCCTCCCCCAGAAATAGGATAAATACACTTTACATGAAGTaGCTTGTCAGCACATCTGTA | + |
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Preference number: 2 (lower is better) Translates to: NIWLHTWPRTSSPRNRINTLYMK*LVSTSV Trigger: TACAGATGTGCTGACAAGGCACTTCATGTAAAGTGT...ATTTATCCTATTTCTGGGGGAGGATGTACGTGGCCATGTATGAAGCCAAATATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000245457.6 |
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| 3UTR-3UTR CCA 90 bp | AATATTTGGCTTCATACATGGCCACGTACATCCTCCCCCAGAAATAGGATAAATAAGTTTAATCTGGTCTaGCTGTACACTATATGTGTA | + |
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Preference number: 2 (lower is better) Translates to: NIWLHTWPRTSSPRNRINKFNLV*LYTICV Trigger: TACACATATAGTGTACAGCCAGACCAGATTAAACTT...ATTTATCCTATTTCTGGGGGAGGATGTACGTGGCCATGTATGAAGCCAAATATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000245457.6 |
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| 3UTR GCA 72 bp | AATGCAGCCGATTGTTCCTCCAAAGGCCAAGTACCATaGTCACTGAGGGTAGGTTTTGTAGCTCCTTCTGAC | + |
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Preference number: 3 (lower is better) Translates to: NAADCSSKGQVP*SLRVGFVAPSD Trigger: GTCAGAAGGAGCTACAAAACCTACCCTCAGTGAGCATGGTACTTGGCCTTTGGAGGAACAATCGGCTGCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000245457.6 |
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| 3UTR-3UTR CAA 90 bp | GTTTTTAAGCCTAATATTTGGCTTCATACATGGCCACGTACATCCTCCCCCAGAACAAAACCACATACTTaGTCATTCAACAGGAAAGCT | + |
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Preference number: 3 (lower is better) Translates to: VFKPNIWLHTWPRTSSPRTKPHT*SFNRKA Trigger: AGCTTTCCTGTTGAATGACAAAGTATGTGGTTTTGT...TCTGGGGGAGGATGTACGTGGCCATGTATGAAGCCAAATATTAGGCTTAAAAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000245457.6 |
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| 3UTR TCA 72 bp | TTTCAACTTCATTGTTCAAATAAAGGGTTCGCTAAGTaGTCACAAGACAGCAGGCTTGGTTGCTTCCACATA | + |
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Preference number: 3 (lower is better) Translates to: FQLHCSNKGFAK*SQDSRLGCFHI Trigger: TATGTGGAAGCAACCAAGCCTGCTGTCTTGTGATCACTTAGCGAACCCTTTATTTGAACAATGAAGTTGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000245457.6 |
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| CDS-3UTR TCA 90 bp | AATAGGCAGCTGGATCTTCAATGCAGCCGATTGTTCCTCCAAAGGCCAAGTACCTCCGCCCGTGCCGGATaGAGCACCAGGTCCCGGGGC | + |
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Preference number: 4 (lower is better) Translates to: NRQLDLQCSRLFLQRPSTSARAG*STRSRG Trigger: GCCCCGGGACCTGGTGCTTCATCCGGCACGGGCGGA...GGTACTTGGCCTTTGGAGGAACAATCGGCTGCATTGAAGATCCAGCTGCCTATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000245457.6 |
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| CDS-3UTR GCA 90 bp | AATAGGCAGCTGGATCTTCAATGCAGCCGATTGTTCCTCCAAAGGCCAAGTACCAGGAGAGGGAGCTCCTaGGGCCGGCGCTGCACCCCA | + |
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Preference number: 4 (lower is better) Translates to: NRQLDLQCSRLFLQRPSTRRGSS*GRRCTP Trigger: TGGGGTGCAGCGCCGGCCGCAGGAGCTCCCTCTCCT...GGTACTTGGCCTTTGGAGGAACAATCGGCTGCATTGAAGATCCAGCTGCCTATT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000245457.6 |
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| CDS-3UTR TCA 90 bp | AATAGGCAGCTGGATCTTCAATGCAGCCGATTGTTCCTCCAAAGGCCAAGTACCGCAGCGCCAGTGCTATaGGGTTCCCCAGCACCCCGG | + |
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Preference number: 4 (lower is better) Translates to: NRQLDLQCSRLFLQRPSTAAPVL*GSPAPR Trigger: CCGGGGTGCTGGGGAACCTCATAGCACTGGCGCTGC...GGTACTTGGCCTTTGGAGGAACAATCGGCTGCATTGAAGATCCAGCTGCCTATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000245457.6 |
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| CDS-3UTR GCA 90 bp | GGAAAGCTTAAATCAATAGGCAGCTGGATCTTCAATGCAGCCGATTGTTCCTCCTGGCGGCTCGGCTGCTaGATCCGAGCGGCGCTCGAG | + |
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Preference number: 4 (lower is better) Translates to: GKLKSIGSWIFNAADCSSWRLGC*IRAALE Trigger: CTCGAGCGCCGCTCGGATGCAGCAGCCGAGCCGCCA...GGAGGAACAATCGGCTGCATTGAAGATCCAGCTGCCTATTGATTTAAGCTTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000245457.6 |
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| CDS-3UTR CCA 90 bp | AATAGGCAGCTGGATCTTCAATGCAGCCGATTGTTCCTCCAAAGGCCAAGTACCGGCTGGGCTTTCGCCTaGGGGAAGCCACTGTCGCGT | + |
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Preference number: 4 (lower is better) Translates to: NRQLDLQCSRLFLQRPSTGWAFA*GKPLSR Trigger: ACGCGACAGTGGCTTCCCCCAGGCGAAAGCCCAGCC...GGTACTTGGCCTTTGGAGGAACAATCGGCTGCATTGAAGATCCAGCTGCCTATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000245457.6 |
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| CDS-3UTR GCA 90 bp | TGCTCACTGAGGGTAGGTTTTGTAGCTCCTTCTGACACTTTACATGAAGTGCCTCGAAAGCGAAGTAGGTaGACGCGCGGCTCTCGGGCG | + |
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Preference number: 4 (lower is better) Translates to: CSLRVGFVAPSDTLHEVPRKRSR*TRGSRA Trigger: CGCCCGAGAGCCGCGCGTGCACCTACTTCGCTTTCG...AGGCACTTCATGTAAAGTGTCAGAAGGAGCTACAAAACCTACCCTCAGTGAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000245457.6 |
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| CDS-3UTR CCA 90 bp | CTGACACTTTACATGAAGTGCCTTGTCAGCACATCTGTAGCCTTGACCACAGCTGACGGAGCTGATGGCTaGGCTTTCGCCTGGGGGAAG | + |
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Preference number: 4 (lower is better) Translates to: LTLYMKCLVSTSVALTTADGADG*AFAWGK Trigger: CTTCCCCCAGGCGAAAGCCCAGCCATCAGCTCCGTC...AGCTGTGGTCAAGGCTACAGATGTGCTGACAAGGCACTTCATGTAAAGTGTCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000245457.6 |
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| CDS-3UTR TCA 90 bp | GTTTTTAAGCCTAATATTTGGCTTCATACATGGCCACGTACATCCTCCCCCAGAGGGAGGAAGAGGGTCTaGGAGCCGGAGCGTTCCGAG | + |
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Preference number: 4 (lower is better) Translates to: VFKPNIWLHTWPRTSSPRGRKRV*EPERSE Trigger: CTCGGAACGCTCCGGCTCTCAGACCCTCTTCCTCCC...TCTGGGGGAGGATGTACGTGGCCATGTATGAAGCCAAATATTAGGCTTAAAAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000245457.6 |
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| CDS-3UTR TCA 90 bp | TGCTCACTGAGGGTAGGTTTTGTAGCTCCTTCTGACACTTTACATGAAGTGCCTGGGAGACTGCATAGATaGCAGGCAGCACGGCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: CSLRVGFVAPSDTLHEVPGRLHR*QAARPG Trigger: GCCTGGCCGTGCTGCCTGTCATCTATGCAGTCTCCC...AGGCACTTCATGTAAAGTGTCAGAAGGAGCTACAAAACCTACCCTCAGTGAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000245457.6 |
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| CDS-3UTR GCA 90 bp | AATATTTGGCTTCATACATGGCCACGTACATCCTCCCCCAGAAATAGGATAAATGAGTGGCGGCTCGGCTaGTGCATCCGAGCGGCGCTC | + |
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Preference number: 4 (lower is better) Translates to: NIWLHTWPRTSSPRNRINEWRLG*CIRAAL Trigger: GAGCGCCGCTCGGATGCAGCAGCCGAGCCGCCACTC...ATTTATCCTATTTCTGGGGGAGGATGTACGTGGCCATGTATGAAGCCAAATATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000245457.6 |
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| CDS-3UTR GCA 90 bp | AATAGGCAGCTGGATCTTCAATGCAGCCGATTGTTCCTCCAAAGGCCAAGTACCTTGCCCATGGTGGGGTaGCTGGAAAAGAGATGCGCC | + |
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Preference number: 4 (lower is better) Translates to: NRQLDLQCSRLFLQRPSTLPMVG*LEKRCA Trigger: GGCGCATCTCTTTTCCAGGCACCCCACCATGGGCAA...GGTACTTGGCCTTTGGAGGAACAATCGGCTGCATTGAAGATCCAGCTGCCTATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000245457.6 |
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| CDS-3UTR GCA 90 bp | AATAGGCAGCTGGATCTTCAATGCAGCCGATTGTTCCTCCAAAGGCCAAGTACCAGTCATTGGAGGCATTaGCCATGGTGGGGTGCCTGG | + |
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Preference number: 4 (lower is better) Translates to: NRQLDLQCSRLFLQRPSTSHWRH*PWWGAW Trigger: CCAGGCACCCCACCATGGGCAATGCCTCCAATGACT...GGTACTTGGCCTTTGGAGGAACAATCGGCTGCATTGAAGATCCAGCTGCCTATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000245457.6 |
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| CDS-3UTR GCA 90 bp | TGCTCACTGAGGGTAGGTTTTGTAGCTCCTTCTGACACTTTACATGAAGTGCCTCGCCAGCAGCGCCAGTaGTATGAGGTTCCCCAGCAC | + |
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Preference number: 4 (lower is better) Translates to: CSLRVGFVAPSDTLHEVPRQQRQ*YEVPQH Trigger: GTGCTGGGGAACCTCATAGCACTGGCGCTGCTGGCG...AGGCACTTCATGTAAAGTGTCAGAAGGAGCTACAAAACCTACCCTCAGTGAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000245457.6 |
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| CDS-3UTR CCA 90 bp | GGAAAGCTTAAATCAATAGGCAGCTGGATCTTCAATGCAGCCGATTGTTCCTCCAGTGCCACCAGGGTCTaGTTCCGCGCGTACGAAGCC | + |
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Preference number: 4 (lower is better) Translates to: GKLKSIGSWIFNAADCSSSATRV*FRAYEA Trigger: GGCTTCGTACGCGCGGAACCAGACCCTGGTGGCACT...GGAGGAACAATCGGCTGCATTGAAGATCCAGCTGCCTATTGATTTAAGCTTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000245457.6 |
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| CDS-3UTR GCA 90 bp | GGAAAGCTTAAATCAATAGGCAGCTGGATCTTCAATGCAGCCGATTGTTCCTCCTGCCTGGAAAAGAGATaGGCCCTCCTCTCCCGGCCT | + |
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Preference number: 4 (lower is better) Translates to: GKLKSIGSWIFNAADCSSCLEKR*ALLSRP Trigger: AGGCCGGGAGAGGAGGGCGCATCTCTTTTCCAGGCA...GGAGGAACAATCGGCTGCATTGAAGATCCAGCTGCCTATTGATTTAAGCTTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000245457.6 |
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| CDS-3UTR GCA 90 bp | AATATTTGGCTTCATACATGGCCACGTACATCCTCCCCCAGAAATAGGATAAATGCTCTCGGGCGCCAGTaGCACCAGGGTCTGGTTCCG | + |
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Preference number: 4 (lower is better) Translates to: NIWLHTWPRTSSPRNRINALGRQ*HQGLVP Trigger: CGGAACCAGACCCTGGTGGCACTGGCGCCCGAGAGC...ATTTATCCTATTTCTGGGGGAGGATGTACGTGGCCATGTATGAAGCCAAATATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000245457.6 |
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| CDS-3UTR GCA 90 bp | TGCTCACTGAGGGTAGGTTTTGTAGCTCCTTCTGACACTTTACATGAAGTGCCTCTCCGGCTTCGGCGGTaGATGCGGATGAGGTTGAGA | + |
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Preference number: 4 (lower is better) Translates to: CSLRVGFVAPSDTLHEVPLRLRR*MRMRLR Trigger: TCTCAACCTCATCCGCATGCACCGCCGAAGCCGGAG...AGGCACTTCATGTAAAGTGTCAGAAGGAGCTACAAAACCTACCCTCAGTGAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000245457.6 |
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| CDS-3UTR CCA 90 bp | CTGACACTTTACATGAAGTGCCTTGTCAGCACATCTGTAGCCTTGACCACAGCTCTCCCGGCCTTTACCTaGGAGGAAGAGGGTCTGAGA | + |
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Preference number: 4 (lower is better) Translates to: LTLYMKCLVSTSVALTTALPAFT*EEEGLR Trigger: TCTCAGACCCTCTTCCTCCCAGGTAAAGGCCGGGAG...AGCTGTGGTCAAGGCTACAGATGTGCTGACAAGGCACTTCATGTAAAGTGTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000245457.6 |
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| CDS-3UTR CCA 90 bp | TGCTCACTGAGGGTAGGTTTTGTAGCTCCTTCTGACACTTTACATGAAGTGCCTGCCAGGAGAATGAGGTaGTCCGTCTCCTCCGCCATG | + |
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Preference number: 4 (lower is better) Translates to: CSLRVGFVAPSDTLHEVPARRMR*SVSSAM Trigger: CATGGCGGAGGAGACGGACCACCTCATTCTCCTGGC...AGGCACTTCATGTAAAGTGTCAGAAGGAGCTACAAAACCTACCCTCAGTGAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000245457.6 |
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| CDS-3UTR CCA 90 bp | GTTTTTAAGCCTAATATTTGGCTTCATACATGGCCACGTACATCCTCCCCCAGACGAAGCCAGTACCACTaGGCTGATGAGGCAGGTCCC | + |
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Preference number: 4 (lower is better) Translates to: VFKPNIWLHTWPRTSSPRRSQYH*ADEAGP Trigger: GGGACCTGCCTCATCAGCCCAGTGGTACTGGCTTCG...TCTGGGGGAGGATGTACGTGGCCATGTATGAAGCCAAATATTAGGCTTAAAAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000245457.6 |
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| CDS-3UTR GCA 90 bp | CTGACACTTTACATGAAGTGCCTTGTCAGCACATCTGTAGCCTTGACCACAGCTGAAGAGCAGGGAGACTaGATAGATGACAGGCAGCAC | + |
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Preference number: 4 (lower is better) Translates to: LTLYMKCLVSTSVALTTAEEQGD*IDDRQH Trigger: GTGCTGCCTGTCATCTATGCAGTCTCCCTGCTCTTC...AGCTGTGGTCAAGGCTACAGATGTGCTGACAAGGCACTTCATGTAAAGTGTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000245457.6 |
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| CDS-3UTR CCA 90 bp | CTGACACTTTACATGAAGTGCCTTGTCAGCACATCTGTAGCCTTGACCACAGCTTCGCAGTCCTCAGACTaGGAGTCATTGGAGGCATTG | + |
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Preference number: 4 (lower is better) Translates to: LTLYMKCLVSTSVALTTASQSSD*ESLEAL Trigger: CAATGCCTCCAATGACTCCCAGTCTGAGGACTGCGA...AGCTGTGGTCAAGGCTACAGATGTGCTGACAAGGCACTTCATGTAAAGTGTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000245457.6 |
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| CDS-3UTR CCA 90 bp | AATATTTGGCTTCATACATGGCCACGTACATCCTCCCCCAGAAATAGGATAAATCCGTCTCCTCCGCCATaGACACCCTTTCCCCTCTCC | + |
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Preference number: 4 (lower is better) Translates to: NIWLHTWPRTSSPRNRINPSPPP*TPFPLS Trigger: GGAGAGGGGAAAGGGTGTCCATGGCGGAGGAGACGG...ATTTATCCTATTTCTGGGGGAGGATGTACGTGGCCATGTATGAAGCCAAATATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000245457.6 |
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| CDS-3UTR CCA 90 bp | AATATTTGGCTTCATACATGGCCACGTACATCCTCCCCCAGAAATAGGATAAATCCATGGTGGGGTGCCTaGAAAAGAGATGCGCCCTCC | + |
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Preference number: 4 (lower is better) Translates to: NIWLHTWPRTSSPRNRINPWWGA*KRDAPS Trigger: GGAGGGCGCATCTCTTTTCCAGGCACCCCACCATGG...ATTTATCCTATTTCTGGGGGAGGATGTACGTGGCCATGTATGAAGCCAAATATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000245457.6 |
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| CDS-3UTR CCA 90 bp | GGAAAGCTTAAATCAATAGGCAGCTGGATCTTCAATGCAGCCGATTGTTCCTCCAGGCATTGCCCATGGTaGGGTGCCTGGAAAAGAGAT | + |
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Preference number: 4 (lower is better) Translates to: GKLKSIGSWIFNAADCSSRHCPW*GAWKRD Trigger: ATCTCTTTTCCAGGCACCCCACCATGGGCAATGCCT...GGAGGAACAATCGGCTGCATTGAAGATCCAGCTGCCTATTGATTTAAGCTTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000245457.6 |
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| CDS-3UTR TCA 90 bp | AATAGGCAGCTGGATCTTCAATGCAGCCGATTGTTCCTCCAAAGGCCAAGTACCCTGTTTACTGGCATCTaGCTGTGTAGAACAGGAAGT | + |
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Preference number: 4 (lower is better) Translates to: NRQLDLQCSRLFLQRPSTLFTGI*LCRTGS Trigger: ACTTCCTGTTCTACACAGTCAGATGCCAGTAAACAG...GGTACTTGGCCTTTGGAGGAACAATCGGCTGCATTGAAGATCCAGCTGCCTATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000245457.6 |
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| CDS-3UTR TCA 90 bp | AATAGGCAGCTGGATCTTCAATGCAGCCGATTGTTCCTCCAAAGGCCAAGTACCCTGATGTTAACCCACTaGGTCCACTCTTGTAAGAGT | + |
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Preference number: 4 (lower is better) Translates to: NRQLDLQCSRLFLQRPSTLMLTH*VHSCKS Trigger: ACTCTTACAAGAGTGGACTCAGTGGGTTAACATCAG...GGTACTTGGCCTTTGGAGGAACAATCGGCTGCATTGAAGATCCAGCTGCCTATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000245457.6 |
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| CDS-3UTR CCA 90 bp | AATATTTGGCTTCATACATGGCCACGTACATCCTCCCCCAGAAATAGGATAAATGAAGCAGCAGCAGGGTaGCGTACAGCTGCAGGTAAG | + |
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Preference number: 4 (lower is better) Translates to: NIWLHTWPRTSSPRNRINEAAAG*RTAAGK Trigger: CTTACCTGCAGCTGTACGCCACCCTGCTGCTGCTTC...ATTTATCCTATTTCTGGGGGAGGATGTACGTGGCCATGTATGAAGCCAAATATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000245457.6 |
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| CDS-3UTR CCA 90 bp | AATAGGCAGCTGGATCTTCAATGCAGCCGATTGTTCCTCCAAAGGCCAAGTACCACAAGACAGCAGGCTTaGTTGCTTCCACATATTGAC | + |
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Preference number: 4 (lower is better) Translates to: NRQLDLQCSRLFLQRPSTTRQQA*LLPHID Trigger: GTCAATATGTGGAAGCAACCAAGCCTGCTGTCTTGT...GGTACTTGGCCTTTGGAGGAACAATCGGCTGCATTGAAGATCCAGCTGCCTATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000245457.6 |
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| CDS-3UTR CCA 90 bp | AAGCCTAATATTTGGCTTCATACATGGCCACGTACATCCTCCCCCAGAAATAGGATTTGGCTTCATACATaGCCACGTACATCCTCCCCC | + |
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Preference number: 4 (lower is better) Translates to: KPNIWLHTWPRTSSPRNRIWLHT*PRTSSP Trigger: GGGGGAGGATGTACGTGGCCATGTATGAAGCCAAAT...CCTATTTCTGGGGGAGGATGTACGTGGCCATGTATGAAGCCAAATATTAGGCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000245457.6 |
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| CDS-3UTR GCA 90 bp | TGCTCACTGAGGGTAGGTTTTGTAGCTCCTTCTGACACTTTACATGAAGTGCCTCAGCTGGATCTTCAATaGAGCCGATTGTTCCTCCAA | + |
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Preference number: 4 (lower is better) Translates to: CSLRVGFVAPSDTLHEVPQLDLQ*SRLFLQ Trigger: TTGGAGGAACAATCGGCTGCATTGAAGATCCAGCTG...AGGCACTTCATGTAAAGTGTCAGAAGGAGCTACAAAACCTACCCTCAGTGAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000245457.6 |
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| CDS-3UTR CCA 90 bp | AATATTTGGCTTCATACATGGCCACGTACATCCTCCCCCAGAAATAGGATAAATCAGACTGGGAGTCATTaGAGGCATTGCCCATGGTGG | + |
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Preference number: 4 (lower is better) Translates to: NIWLHTWPRTSSPRNRINQTGSH*RHCPWW Trigger: CCACCATGGGCAATGCCTCCAATGACTCCCAGTCTG...ATTTATCCTATTTCTGGGGGAGGATGTACGTGGCCATGTATGAAGCCAAATATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000245457.6 |
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| CDS-3UTR TCA 90 bp | CTGACACTTTACATGAAGTGCCTTGTCAGCACATCTGTAGCCTTGACCACAGCTGCAGTTCCTGGAGGATaGGTAAACAAAACTGATGTT | + |
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Preference number: 4 (lower is better) Translates to: LTLYMKCLVSTSVALTTAAVPGG*VNKTDV Trigger: AACATCAGTTTTGTTTACTCATCCTCCAGGAACTGC...AGCTGTGGTCAAGGCTACAGATGTGCTGACAAGGCACTTCATGTAAAGTGTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000245457.6 |
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| CDS-3UTR GCA 90 bp | AATAGGCAGCTGGATCTTCAATGCAGCCGATTGTTCCTCCAAAGGCCAAGTACCACACTTTACATGAAGTaGCTTGTCAGCACATCTGTA | + |
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Preference number: 4 (lower is better) Translates to: NRQLDLQCSRLFLQRPSTTLYMK*LVSTSV Trigger: TACAGATGTGCTGACAAGGCACTTCATGTAAAGTGT...GGTACTTGGCCTTTGGAGGAACAATCGGCTGCATTGAAGATCCAGCTGCCTATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000245457.6 |
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| CDS-3UTR GCA 90 bp | GGAAAGCTTAAATCAATAGGCAGCTGGATCTTCAATGCAGCCGATTGTTCCTCCAAAGGCCAAGTACCATaGTCACTGAGGGTAGGTTTT | + |
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Preference number: 4 (lower is better) Translates to: GKLKSIGSWIFNAADCSSKGQVP*SLRVGF Trigger: AAAACCTACCCTCAGTGAGCATGGTACTTGGCCTTT...GGAGGAACAATCGGCTGCATTGAAGATCCAGCTGCCTATTGATTTAAGCTTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000245457.6 |
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| CDS-3UTR TCA 90 bp | TGCTCACTGAGGGTAGGTTTTGTAGCTCCTTCTGACACTTTACATGAAGTGCCTGAACTTTTAAACTACTaGCCTCAAAGGTCAGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: CSLRVGFVAPSDTLHEVPELLNY*PQRSAC Trigger: ACAGGCTGACCTTTGAGGTCAGTAGTTTAAAAGTTC...AGGCACTTCATGTAAAGTGTCAGAAGGAGCTACAAAACCTACCCTCAGTGAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000245457.6 |
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| CDS-3UTR CCA 90 bp | GGAAAGCTTAAATCAATAGGCAGCTGGATCTTCAATGCAGCCGATTGTTCCTCCTTGACCTGCAGTTCCTaGAGGATGAGTAAACAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: GKLKSIGSWIFNAADCSSLTCSS*RMSKQN Trigger: GTTTTGTTTACTCATCCTCCAGGAACTGCAGGTCAA...GGAGGAACAATCGGCTGCATTGAAGATCCAGCTGCCTATTGATTTAAGCTTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000245457.6 |
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| CDS-3UTR TCA 90 bp | GGAAAGCTTAAATCAATAGGCAGCTGGATCTTCAATGCAGCCGATTGTTCCTCCCCTAGAGATTACATATaGAGTTTAATCTGGTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: GKLKSIGSWIFNAADCSSPRDYI*SLIWSG Trigger: GCCAGACCAGATTAAACTTCATATGTAATCTCTAGG...GGAGGAACAATCGGCTGCATTGAAGATCCAGCTGCCTATTGATTTAAGCTTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000245457.6 |
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| CDS-3UTR TCA 90 bp | AATATTTGGCTTCATACATGGCCACGTACATCCTCCCCCAGAAATAGGATAAATAATAACCTGACAACTTaGCCTGCAGTTCCTGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: NIWLHTWPRTSSPRNRINNNLTT*PAVPGG Trigger: TCCTCCAGGAACTGCAGGTCAAGTTGTCAGGTTATT...ATTTATCCTATTTCTGGGGGAGGATGTACGTGGCCATGTATGAAGCCAAATATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000245457.6 |
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| CDS-3UTR CCA 90 bp | GTTTTTAAGCCTAATATTTGGCTTCATACATGGCCACGTACATCCTCCCCCAGAAAATCAATAGGCAGCTaGATCTTCAATGCAGCCGAT | + |
|
Preference number: 4 (lower is better) Translates to: VFKPNIWLHTWPRTSSPRKSIGS*IFNAAD Trigger: ATCGGCTGCATTGAAGATCCAGCTGCCTATTGATTT...TCTGGGGGAGGATGTACGTGGCCATGTATGAAGCCAAATATTAGGCTTAAAAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000245457.6 |
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| CDS-3UTR TCA 90 bp | AAGCCTAATATTTGGCTTCATACATGGCCACGTACATCCTCCCCCAGAAATAGGGTTGCTTCCACATATTaGCTTCCTAGAGATTACATA | + |
|
Preference number: 4 (lower is better) Translates to: KPNIWLHTWPRTSSPRNRVASTY*LPRDYI Trigger: TATGTAATCTCTAGGAAGTCAATATGTGGAAGCAAC...CCTATTTCTGGGGGAGGATGTACGTGGCCATGTATGAAGCCAAATATTAGGCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000245457.6 |
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| CDS-3UTR TCA 90 bp | AAGCCTAATATTTGGCTTCATACATGGCCACGTACATCCTCCCCCAGAAATAGGGGGTTCCAGTATATCTaGAGAATGAACCAGATTTTT | + |
|
Preference number: 4 (lower is better) Translates to: KPNIWLHTWPRTSSPRNRGFQYI*RMNQIF Trigger: AAAAATCTGGTTCATTCTTCAGATATACTGGAACCC...CCTATTTCTGGGGGAGGATGTACGTGGCCATGTATGAAGCCAAATATTAGGCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000245457.6 |
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| CDS-3UTR TCA 90 bp | GTTTTTAAGCCTAATATTTGGCTTCATACATGGCCACGTACATCCTCCCCCAGAGTTTCCCATATAAGATaGGTCAAACCATGTTCCCTA | + |
|
Preference number: 4 (lower is better) Translates to: VFKPNIWLHTWPRTSSPRVSHIR*VKPCSL Trigger: TAGGGAACATGGTTTGACTCATCTTATATGGGAAAC...TCTGGGGGAGGATGTACGTGGCCATGTATGAAGCCAAATATTAGGCTTAAAAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000245457.6 |
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| CDS-3UTR CCA 90 bp | GGAAAGCTTAAATCAATAGGCAGCTGGATCTTCAATGCAGCCGATTGTTCCTCCTTTAAGCCTAATATTTaGCTTCATACATGGCCACGT | + |
|
Preference number: 4 (lower is better) Translates to: GKLKSIGSWIFNAADCSSFKPNI*LHTWPR Trigger: ACGTGGCCATGTATGAAGCCAAATATTAGGCTTAAA...GGAGGAACAATCGGCTGCATTGAAGATCCAGCTGCCTATTGATTTAAGCTTTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000245457.6 |
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| CDS-3UTR CCA 90 bp | TGCTCACTGAGGGTAGGTTTTGTAGCTCCTTCTGACACTTTACATGAAGTGCCTAAGTTTAATCTGGTCTaGCTGTACACTATATGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: CSLRVGFVAPSDTLHEVPKFNLV*LYTICV Trigger: TACACATATAGTGTACAGCCAGACCAGATTAAACTT...AGGCACTTCATGTAAAGTGTCAGAAGGAGCTACAAAACCTACCCTCAGTGAGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000245457.6 |
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| CDS-3UTR CCA 90 bp | AATATTTGGCTTCATACATGGCCACGTACATCCTCCCCCAGAAATAGGATAAATAAAAACCTAAGAGCTTaGAGGTCCCATTTTTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: NIWLHTWPRTSSPRNRINKNLRA*RSHFSF Trigger: AAAGGAAAAATGGGACCTCCAAGCTCTTAGGTTTTT...ATTTATCCTATTTCTGGGGGAGGATGTACGTGGCCATGTATGAAGCCAAATATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000245457.6 |
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| CDS GCA 90 bp | CTTGCCCTGGGTCTCCCGCCGCGCGCCGAGTGGCGGCTCGGCTGCTaGATCCGAGCGGCGCTCGAGGCTCCCGCGCCTACCCGCGCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: LALGLPPRAEWRLGC*IRAALEAPAPTRAG Trigger: GCCGGCGCGGGTAGGCGCGGGAGCCTCGAGCGCCGCTCGGATGCAGCAGCCGAGCCGCCACTCGGCGCGCGGCGGGAGACCCAGGGCAAG 80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557436.1 |
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| CDS GCA 90 bp | CGGCTTGCCCTGGGTCTCCCGCCGCGCGCCGAGTGGCGGCTCGGCTaGTGCATCCGAGCGGCGCTCGAGGCTCCCGCGCCTACCCGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: RLALGLPPRAEWRLG*CIRAALEAPAPTRA Trigger: GGCGCGGGTAGGCGCGGGAGCCTCGAGCGCCGCTCGGATGCAGCAGCCGAGCCGCCACTCGGCGCGCGGCGGGAGACCCAGGGCAAGCCG 80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557436.1 |
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| CDS GCA 90 bp | GAAATCCAGAGCCCCCTTCCCGCACCCAGCGCGCCGACGGCGGCTTaGCCTGGGTCTCCCGCCGCGCGCCGAGTGGCGGCTCGGCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: EIQSPLPAPSAPTAA*PGSPAARRVAARLL Trigger: CAGCAGCCGAGCCGCCACTCGGCGCGCGGCGGGAGACCCAGGGCAAGCCGCCGTCGGCGCGCTGGGTGCGGGAAGGGGGCTCTGGATTTC 77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000245457.6 ENST00000557436.1 |
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| CDS TCA 90 bp | AGTCCAGCAGCGGCAGCGAGCAGAAGAGCAGGGAGACTGCATAGATaGCAGGCAGCACGGCCAGGCCCCCGGAGCGCGAGACGCGGCGCT | + |
|
Preference number: 5 (lower is better) Translates to: SPAAAASRRAGRLHR*QAARPGPRSARRGA Trigger: AGCGCCGCGTCTCGCGCTCCGGGGGCCTGGCCGTGCTGCCTGTCATCTATGCAGTCTCCCTGCTCTTCTGCTCGCTGCCGCTGCTGGACT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000245457.6 |
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| CDS GCA 90 bp | CATGGCGAAAGCGAAGTAGGTGCACGCGCGGCTCTCGGGCGCCAGTaGCACCAGGGTCTGGTTCCGCGCGTACGAAGCCAGTACCACTGG | + |
|
Preference number: 5 (lower is better) Translates to: HGESEVGARAALGRQ*HQGLVPRVRSQYHW Trigger: CCAGTGGTACTGGCTTCGTACGCGCGGAACCAGACCCTGGTGGCACTGGCGCCCGAGAGCCGCGCGTGCACCTACTTCGCTTTCGCCATG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000245457.6 |
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| CDS GCA 90 bp | CTGCCCATAGTCCAGCAGCGGCAGCGAGCAGAAGAGCAGGGAGACTaGATAGATGACAGGCAGCACGGCCAGGCCCCCGGAGCGCGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: LPIVQQRQRAEEQGD*IDDRQHGQAPGARD Trigger: GTCTCGCGCTCCGGGGGCCTGGCCGTGCTGCCTGTCATCTATGCAGTCTCCCTGCTCTTCTGCTCGCTGCCGCTGCTGGACTATGGGCAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000245457.6 |
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| CDS GCA 90 bp | CCACTGCCCAGGGAAGGTCCGCAGCGGCTTCTCCGGCTTCGGCGGTaGATGCGGATGAGGTTGAGAATGACACTGAAGTTGCAGGCGAGC | + |
|
Preference number: 5 (lower is better) Translates to: PLPREGPQRLLRLRR*MRMRLRMTLKLQAS Trigger: GCTCGCCTGCAACTTCAGTGTCATTCTCAACCTCATCCGCATGCACCGCCGAAGCCGGAGAAGCCGCTGCGGACCTTCCCTGGGCAGTGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000245457.6 |
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| CDS GCA 90 bp | CAGTCCTCAGACTGGGAGTCATTGGAGGCATTGCCCATGGTGGGGTaGCTGGAAAAGAGATGCGCCCTCCTCTCCCGGCCTTTACCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: QSSDWESLEALPMVG*LEKRCALLSRPLPG Trigger: CCCAGGTAAAGGCCGGGAGAGGAGGGCGCATCTCTTTTCCAGGCACCCCACCATGGGCAATGCCTCCAATGACTCCCAGTCTGAGGACTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000245457.6 |
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| CDS GCA 90 bp | ACTGTCGCGTCTCGCAGTCCTCAGACTGGGAGTCATTGGAGGCATTaGCCATGGTGGGGTGCCTGGAAAAGAGATGCGCCCTCCTCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: TVASRSPQTGSHWRH*PWWGAWKRDAPSSP Trigger: GGGAGAGGAGGGCGCATCTCTTTTCCAGGCACCCCACCATGGGCAATGCCTCCAATGACTCCCAGTCTGAGGACTGCGAGACGCGACAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000245457.6 |
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| CDS-3UTR CAA 90 bp | GTTTTTAAGCCTAATATTTGGCTTCATACATGGCCACGTACATCCTCCCCCAGAGAGTCATTGGAGGCATaGCCCATGGTGGGGTGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: VFKPNIWLHTWPRTSSPRESLEA*PMVGCL Trigger: CAGGCACCCCACCATGGGCAATGCCTCCAATGACTC...TCTGGGGGAGGATGTACGTGGCCATGTATGAAGCCAAATATTAGGCTTAAAAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000245457.6 |
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| CDS-3UTR CAA 90 bp | TGCTCACTGAGGGTAGGTTTTGTAGCTCCTTCTGACACTTTACATGAAGTGCCTAGAATGACACTGAAGTaGCAGGCGAGCACCGAGACA | + |
|
Preference number: 5 (lower is better) Translates to: CSLRVGFVAPSDTLHEVPRMTLK*QASTET Trigger: TGTCTCGGTGCTCGCCTGCAACTTCAGTGTCATTCT...AGGCACTTCATGTAAAGTGTCAGAAGGAGCTACAAAACCTACCCTCAGTGAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000245457.6 |
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| CDS-3UTR CAA 90 bp | GTTTTTAAGCCTAATATTTGGCTTCATACATGGCCACGTACATCCTCCCCCAGATGCATGCGGATGAGGTaGAGAATGACACTGAAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: VFKPNIWLHTWPRTSSPRCMRMR*RMTLKL Trigger: CAACTTCAGTGTCATTCTCAACCTCATCCGCATGCA...TCTGGGGGAGGATGTACGTGGCCATGTATGAAGCCAAATATTAGGCTTAAAAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000245457.6 |
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| CDS-3UTR CAA 90 bp | TGCTCACTGAGGGTAGGTTTTGTAGCTCCTTCTGACACTTTACATGAAGTGCCTACAAAACCACATACTTaGTCATTCAACAGGAAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: CSLRVGFVAPSDTLHEVPTKPHT*SFNRKA Trigger: AGCTTTCCTGTTGAATGACAAAGTATGTGGTTTTGT...AGGCACTTCATGTAAAGTGTCAGAAGGAGCTACAAAACCTACCCTCAGTGAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000245457.6 |
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| CDS-3UTR CAA 90 bp | TGCTCACTGAGGGTAGGTTTTGTAGCTCCTTCTGACACTTTACATGAAGTGCCTAAGTACAGTCACTGTTaGGGGTTTCAAACAAATTAC | + |
|
Preference number: 5 (lower is better) Translates to: CSLRVGFVAPSDTLHEVPKYSHC*GFQTNY Trigger: GTAATTTGTTTGAAACCCCAAACAGTGACTGTACTT...AGGCACTTCATGTAAAGTGTCAGAAGGAGCTACAAAACCTACCCTCAGTGAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000245457.6 |
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| CDS GCA 72 bp | GGTCTCCCGCCGCGCGCCGAGTGGCGGCTCGGCTGCTaGATCCGAGCGGCGCTCGAGGCTCCCGCGCCTACC | + |
|
Preference number: 6 (lower is better) Translates to: GLPPRAEWRLGC*IRAALEAPAPT Trigger: GGTAGGCGCGGGAGCCTCGAGCGCCGCTCGGATGCAGCAGCCGAGCCGCCACTCGGCGCGCGGCGGGAGACC 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000245457.6 ENST00000557436.1 |
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| CDS GCA 72 bp | CTGGGTCTCCCGCCGCGCGCCGAGTGGCGGCTCGGCTaGTGCATCCGAGCGGCGCTCGAGGCTCCCGCGCCT | + |
|
Preference number: 6 (lower is better) Translates to: LGLPPRAEWRLG*CIRAALEAPAP Trigger: AGGCGCGGGAGCCTCGAGCGCCGCTCGGATGCAGCAGCCGAGCCGCCACTCGGCGCGCGGCGGGAGACCCAG 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000245457.6 ENST00000557436.1 |
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| CDS CCA 72 bp | CGGCGGCTTGCCCTGGGTCTCCCGCCGCGCGCCGAGTaGCGGCTCGGCTGCTGCATCCGAGCGGCGCTCGAG | + |
|
Preference number: 6 (lower is better) Translates to: RRLALGLPPRAE*RLGCCIRAALE Trigger: CTCGAGCGCCGCTCGGATGCAGCAGCCGAGCCGCCACTCGGCGCGCGGCGGGAGACCCAGGGCAAGCCGCCG 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000245457.6 ENST00000557436.1 |
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| CDS CAA 90 bp | CGAAATCCAGAGCCCCCTTCCCGCACCCAGCGCGCCGACGGCGGCTaGCCCTGGGTCTCCCGCCGCGCGCCGAGTGGCGGCTCGGCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: RNPEPPSRTQRADGG*PWVSRRAPSGGSAA Trigger: AGCAGCCGAGCCGCCACTCGGCGCGCGGCGGGAGACCCAGGGCAAGCCGCCGTCGGCGCGCTGGGTGCGGGAAGGGGGCTCTGGATTTCG 77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000245457.6 ENST00000557436.1 |
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| CDS GCA 72 bp | AGCGAAGTAGGTGCACGCGCGGCTCTCGGGCGCCAGTaGCACCAGGGTCTGGTTCCGCGCGTACGAAGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: SEVGARAALGRQ*HQGLVPRVRSQ Trigger: CTGGCTTCGTACGCGCGGAACCAGACCCTGGTGGCACTGGCGCCCGAGAGCCGCGCGTGCACCTACTTCGCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000245457.6 |
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| CDS TCA 72 bp | GCGGCAGCGAGCAGAAGAGCAGGGAGACTGCATAGATaGCAGGCAGCACGGCCAGGCCCCCGGAGCGCGAGA | + |
|
Preference number: 6 (lower is better) Translates to: AAASRRAGRLHR*QAARPGPRSAR Trigger: TCTCGCGCTCCGGGGGCCTGGCCGTGCTGCCTGTCATCTATGCAGTCTCCCTGCTCTTCTGCTCGCTGCCGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000245457.6 |
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| CDS GCA 72 bp | GTCCAGCAGCGGCAGCGAGCAGAAGAGCAGGGAGACTaGATAGATGACAGGCAGCACGGCCAGGCCCCCGGA | + |
|
Preference number: 6 (lower is better) Translates to: VQQRQRAEEQGD*IDDRQHGQAPG Trigger: TCCGGGGGCCTGGCCGTGCTGCCTGTCATCTATGCAGTCTCCCTGCTCTTCTGCTCGCTGCCGCTGCTGGAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000245457.6 |
||
| CDS CCA 72 bp | GGGGGAAGCCACTGTCGCGTCTCGCAGTCCTCAGACTaGGAGTCATTGGAGGCATTGCCCATGGTGGGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: GGSHCRVSQSSD*ESLEALPMVGC Trigger: GCACCCCACCATGGGCAATGCCTCCAATGACTCCCAGTCTGAGGACTGCGAGACGCGACAGTGGCTTCCCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000245457.6 |
||
| CDS CCA 72 bp | CAGGGTCTGGTTCCGCGCGTACGAAGCCAGTACCACTaGGCTGATGAGGCAGGTCCCGAGCAGGTCGGTGAA | + |
|
Preference number: 6 (lower is better) Translates to: QGLVPRVRSQYH*ADEAGPEQVGE Trigger: TTCACCGACCTGCTCGGGACCTGCCTCATCAGCCCAGTGGTACTGGCTTCGTACGCGCGGAACCAGACCCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000245457.6 |
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| CDS TCA 72 bp | TCCGCAGCGGCTTCTCCGGCTGGGAGGAAGAGGGTCTaGGAGCCGGAGCGTTCCGAGACTCAGAGGAAAAAG | + |
|
Preference number: 6 (lower is better) Translates to: SAAASPAGRKRV*EPERSETQRKK Trigger: CTTTTTCCTCTGAGTCTCGGAACGCTCCGGCTCTCAGACCCTCTTCCTCCCAGCCGGAGAAGCCGCTGCGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000557436.1 |
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| CDS GCA 72 bp | GACTGGGAGTCATTGGAGGCATTGCCCATGGTGGGGTaGCTGGAAAAGAGATGCGCCCTCCTCTCCCGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: DWESLEALPMVG*LEKRCALLSRP Trigger: AGGCCGGGAGAGGAGGGCGCATCTCTTTTCCAGGCACCCCACCATGGGCAATGCCTCCAATGACTCCCAGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000245457.6 |
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| CDS CCA 72 bp | GGAAAAGAGATGCGCCCTCCTCTCCCGGCCTTTACCTaGGAGGAAGAGGGTCTGAGAGCCGGAGCGTTCCGA | + |
|
Preference number: 6 (lower is better) Translates to: GKEMRPPLPAFT*EEEGLRAGAFR Trigger: TCGGAACGCTCCGGCTCTCAGACCCTCTTCCTCCCAGGTAAAGGCCGGGAGAGGAGGGCGCATCTCTTTTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000245457.6 |
||
| CDS CCA 72 bp | CGAGAACATGACGGAGCTGATGGCTGGGCTTTCGCCTaGGGGAAGCCACTGTCGCGTCTCGCAGTCCTCAGA | + |
|
Preference number: 6 (lower is better) Translates to: REHDGADGWAFA*GKPLSRLAVLR Trigger: TCTGAGGACTGCGAGACGCGACAGTGGCTTCCCCCAGGCGAAAGCCCAGCCATCAGCTCCGTCATGTTCTCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000245457.6 |
||
| CDS CCA 72 bp | GGGAGTCATTGGAGGCATTGCCCATGGTGGGGTGCCTaGAAAAGAGATGCGCCCTCCTCTCCCGGCCTTTAC | + |
|
Preference number: 6 (lower is better) Translates to: GSHWRHCPWWGA*KRDAPSSPGLY Trigger: GTAAAGGCCGGGAGAGGAGGGCGCATCTCTTTTCCAGGCACCCCACCATGGGCAATGCCTCCAATGACTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000245457.6 |
||
| CDS CCA 72 bp | CCTCAGACTGGGAGTCATTGGAGGCATTGCCCATGGTaGGGTGCCTGGAAAAGAGATGCGCCCTCCTCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: PQTGSHWRHCPW*GAWKRDAPSSP Trigger: GGGAGAGGAGGGCGCATCTCTTTTCCAGGCACCCCACCATGGGCAATGCCTCCAATGACTCCCAGTCTGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000245457.6 |
||
| CDS CAA 72 bp | CGGCTTCTCCGGCTTCGGCGGTGCATGCGGATGAGGTaGAGAATGACACTGAAGTTGCAGGCGAGCACCGAG | + |
|
Preference number: 6 (lower is better) Translates to: RLLRLRRCMRMR*RMTLKLQASTE Trigger: CTCGGTGCTCGCCTGCAACTTCAGTGTCATTCTCAACCTCATCCGCATGCACCGCCGAAGCCGGAGAAGCCG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000245457.6 |
||
| CDS CAA 90 bp | GGTCCGCAGCGGCTTCTCCGGCTTCGGCGGTGCATGCGGATGAGGTaGAGAATGACACTGAAGTTGCAGGCGAGCACCGAGACAATGAGA | + |
|
Preference number: 6 (lower is better) Translates to: GPQRLLRLRRCMRMR*RMTLKLQASTETMR Trigger: TCTCATTGTCTCGGTGCTCGCCTGCAACTTCAGTGTCATTCTCAACCTCATCCGCATGCACCGCCGAAGCCGGAGAAGCCGCTGCGGACC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000245457.6 |
||
| CDS GCA 72 bp | AGGGAAGGTCCGCAGCGGCTTCTCCGGCTTCGGCGGTaGATGCGGATGAGGTTGAGAATGACACTGAAGTTG | + |
|
Preference number: 6 (lower is better) Translates to: REGPQRLLRLRR*MRMRLRMTLKL Trigger: CAACTTCAGTGTCATTCTCAACCTCATCCGCATGCACCGCCGAAGCCGGAGAAGCCGCTGCGGACCTTCCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000245457.6 |
||
| CDS CCA 72 bp | AGTCCTCAGACTGGGAGTCATTGGAGGCATTGCCCATaGTGGGGTGCCTGGAAAAGAGATGCGCCCTCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: SPQTGSHWRHCP*WGAWKRDAPSS Trigger: AGAGGAGGGCGCATCTCTTTTCCAGGCACCCCACCATGGGCAATGCCTCCAATGACTCCCAGTCTGAGGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000245457.6 |
||
| CDS CCA 72 bp | GCGAAGGTGATGGTCATGATAGCCAGGAGAATGAGGTaGTCCGTCTCCTCCGCCATGGACACCCTTTCCCCT | + |
|
Preference number: 6 (lower is better) Translates to: AKVMVMIARRMR*SVSSAMDTLSP Trigger: AGGGGAAAGGGTGTCCATGGCGGAGGAGACGGACCACCTCATTCTCCTGGCTATCATGACCATCACCTTCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000245457.6 ENST00000557436.1 |
||
| CDS CAA 72 bp | CGGTGCATGCGGATGAGGTTGAGAATGACACTGAAGTaGCAGGCGAGCACCGAGACAATGAGAAGCAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: RCMRMRLRMTLK*QASTETMRSSS Trigger: GCTGCTGCTTCTCATTGTCTCGGTGCTCGCCTGCAACTTCAGTGTCATTCTCAACCTCATCCGCATGCACCG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000245457.6 |
||
| CDS TCA 72 bp | CTACTGACCTCAAAGGTCAGCCTGTTTACTGGCATCTaGCTGTGTAGAACAGGAAGTTTGTGTTGCATCTTG | + |
|
Preference number: 6 (lower is better) Translates to: LLTSKVSLFTGI*LCRTGSLCCIL Trigger: CAAGATGCAACACAAACTTCCTGTTCTACACAGTCAGATGCCAGTAAACAGGCTGACCTTTGAGGTCAGTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000245457.6 ENST00000557436.1 |
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