RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PTCH1 (Homo sapiens)

Ensembl gene IDs: ENSG00000185920

Ensembl transcript IDs: ENST00000331920.11, ENST00000375271.4, ENST00000375290.6, ENST00000418258.5, ENST00000421141.5, ENST00000429896.6, ENST00000430669.6, ENST00000437951.5, ENST00000437951.6, ENST00000468211.6, ENST00000488809.2, ENST00000546744.5, ENST00000546820.5, ENST00000547672.5, ENST00000548379.5, ENST00000548420.1, ENST00000548945.6, ENST00000550136.1, ENST00000550914.6, ENST00000551425.1, ENST00000551623.1, ENST00000551630.1, ENST00000551845.5, ENST00000553011.5, ENST00000553256.5

Found 1360 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGCACGGAGCTGCCCATGGCAGTGGACGCTGGGTTCCGAGGGTTGTaGGAACGGGCCCCGCGAGGGCCCCAGCGGGCCCTATTGCTAGGG +
Preference number: 1 (lower is better)
Translates to: GTELPMAVDAGFRGL*ERAPRGPQRALLLG
Trigger: CCCTAGCAATAGGGCCCGCTGGGGCCCTCGCGGGGCCCGTTCTCACAACCCTCGGAACCCAGCGTCCACTGCCATGGGCAGCTCCGTGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR TCA 90 bp GGCCTCCCGCGCCCTGCTGGGCCTCGTAGTGCCGAAGCTCCTCGCTaGGGCCTGACACTGTCGTCTGGGAACTATACTCCGAGTCGGAGG +
Preference number: 1 (lower is better)
Translates to: GLPRPAGPRSAEAPR*GLTLSSGNYTPSRR
Trigger: CCTCCGACTCGGAGTATAGTTCCCAGACGACAGTGTCAGGCCTCAGCGAGGAGCTTCGGCACTACGAGGCCCAGCAGGGCGCGGGAGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR GCA 90 bp CCCAGCAGAGTGGACACGGCGCCATCCAGGACGGGTGCAAACATGTaGTCCAGGGCAAGCACAGCCCTGCGGTTCTTGTCGCCGATGGCC +
Preference number: 1 (lower is better)
Translates to: PSRVDTAPSRTGANM*SRASTALRFLSPMA
Trigger: GGCCATCGGCGACAAGAACCGCAGGGCTGTGCTTGCCCTGGAGCACATGTTTGCACCCGTCCTGGATGGCGCCGTGTCCACTCTGCTGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR CCA 90 bp GCTTTGTCGTGGACCCATTCTGGTCGGTGTGGCCGGATGTTGGCCTaGGAGGCAGCATACGCGACGGGGTCGTTGCTGACCCAAGCCGTC +
Preference number: 1 (lower is better)
Translates to: ALSWTHSGRCGRMLA*EAAYATGSLLTQAV
Trigger: GACGGCTTGGGTCAGCAACGACCCCGTCGCGTATGCTGCCTCCCAGGCCAACATCCGGCCACACCGACCAGAATGGGTCCACGACAAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR CCA 90 bp ATTCGGGATGGACCACAGTGGAGTGGGCGAAGACGGGGTTTTCTGTaGCTTCCACGATCACTTGGTGGGCAGGGCCTCCCGCGCCCTGCT +
Preference number: 1 (lower is better)
Translates to: IRDGPQWSGRRRGFL*LPRSLGGQGLPRPA
Trigger: AGCAGGGCGCGGGAGGCCCTGCCCACCAAGTGATCGTGGAAGCCACAGAAAACCCCGTCTTCGCCCACTCCACTGTGGTCCATCCCGAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR TCA 90 bp CGCGCCCTGCTGGGCCTCGTAGTGCCGAAGCTCCTCGCTGAGGCCTaGCACTGTCGTCTGGGAACTATACTCCGAGTCGGAGGAATCAGA +
Preference number: 1 (lower is better)
Translates to: RALLGLVVPKLLAEA*HCRLGTILRVGGIR
Trigger: TCTGATTCCTCCGACTCGGAGTATAGTTCCCAGACGACAGTGTCAGGCCTCAGCGAGGAGCTTCGGCACTACGAGGCCCAGCAGGGCGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR GCA 90 bp CATCAGCACTCCCAGCAGAGTGGACACGGCGCCATCCAGGACGGGTaGAAACATGTGCTCCAGGGCAAGCACAGCCCTGCGGTTCTTGTC +
Preference number: 1 (lower is better)
Translates to: HQHSQQSGHGAIQDG*KHVLQGKHSPAVLV
Trigger: GACAAGAACCGCAGGGCTGTGCTTGCCCTGGAGCACATGTTTGCACCCGTCCTGGATGGCGCCGTGTCCACTCTGCTGGGAGTGCTGATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR GCA 90 bp CCCTCGGGGATGCCGAGAACCCCAGGAGAACCTTGTCCTCCTCTTTaGCTGGCTCTAGGTCCCTTGGCTGCCCTTGTCAGTGGCACTCAC +
Preference number: 1 (lower is better)
Translates to: PSGMPRTPGEPCPPL*LALGPLAALVSGTH
Trigger: GTGAGTGCCACTGACAAGGGCAGCCAAGGGACCTAGAGCCAGGCAAAGAGGAGGACAAGGTTCTCCTGGGGTTCTCGGCATCCCCGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430669.6
3UTR CCA 90 bp TACCTGGGAGATCAAGAGGAAACGGGAACACGCGCTGTGACAGGGTaGATCGCGCCACCCTCCGTGTGCCCGACACAGCAGCATGGCAAC +
Preference number: 1 (lower is better)
Translates to: YLGDQEETGTRAVTG*IAPPSVCPTQQHGN
Trigger: GTTGCCATGCTGCTGTGTCGGGCACACGGAGGGTGGCGCGATCCACCCTGTCACAGCGCGTGTTCCCGTTTCCTCTTGATCTCCCAGGTA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR GCA 90 bp ACGGGAACACGCGCTGTGACAGGGTGGATCGCGCCACCCTCCGTGTaGCCGACACAGCAGCATGGCAACGCCAGAAATGAACAAAACCCA +
Preference number: 1 (lower is better)
Translates to: TGTRAVTGWIAPPSV*PTQQHGNARNEQNP
Trigger: TGGGTTTTGTTCATTTCTGGCGTTGCCATGCTGCTGTGTCGGGCACACGGAGGGTGGCGCGATCCACCCTGTCACAGCGCGTGTTCCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR CCA 90 bp TTCAGGCATGTAGTCGGCTTTGTCGTGGACCCATTCTGGTCGGTGTaGCCGGATGTTGGCCTGGGAGGCAGCATACGCGACGGGGTCGTT +
Preference number: 1 (lower is better)
Translates to: FRHVVGFVVDPFWSV*PDVGLGGSIRDGVV
Trigger: AACGACCCCGTCGCGTATGCTGCCTCCCAGGCCAACATCCGGCCACACCGACCAGAATGGGTCCACGACAAAGCCGACTACATGCCTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR TCA 90 bp CAAAGAAATACCTGGGAGATCAAGAGGAAACGGGAACACGCGCTGTaGCAGGGTGGATCGCGCCACCCTCCGTGTGCCCGACACAGCAGC +
Preference number: 1 (lower is better)
Translates to: QRNTWEIKRKREHAL*QGGSRHPPCARHSS
Trigger: GCTGCTGTGTCGGGCACACGGAGGGTGGCGCGATCCACCCTGTCACAGCGCGTGTTCCCGTTTCCTCTTGATCTCCCAGGTATTTCTTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR GCA 90 bp CATCCAGGACGGGTGCAAACATGTGCTCCAGGGCAAGCACAGCCCTaGGGTTCTTGTCGCCGATGGCCGTCAGAAAGGCCAAAGCAACGT +
Preference number: 1 (lower is better)
Translates to: HPGRVQTCAPGQAQP*GSCRRWPSERPKQR
Trigger: ACGTTGCTTTGGCCTTTCTGACGGCCATCGGCGACAAGAACCGCAGGGCTGTGCTTGCCCTGGAGCACATGTTTGCACCCGTCCTGGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR GCA 90 bp ACCAAGGTAAACCTGTCAGCCAGGGACAGCCTCTGGCAGACACTCTaGATGGCTGGAGGGCACAGACTCCACGCAGGGATGCGTTTCTGG +
Preference number: 1 (lower is better)
Translates to: TKVNLSARDSLWQTL*MAGGHRLHAGMRFW
Trigger: CCAGAAACGCATCCCTGCGTGGAGTCTGTGCCCTCCAGCCATGCAGAGTGTCTGCCAGAGGCTGTCCCTGGCTGACAGGTTTACCTTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR CCA 90 bp CAGCCTTGTTTCAGGCATGTAGTCGGCTTTGTCGTGGACCCATTCTaGTCGGTGTGGCCGGATGTTGGCCTGGGAGGCAGCATACGCGAC +
Preference number: 1 (lower is better)
Translates to: QPCFRHVVGFVVDPF*SVWPDVGLGGSIRD
Trigger: GTCGCGTATGCTGCCTCCCAGGCCAACATCCGGCCACACCGACCAGAATGGGTCCACGACAAAGCCGACTACATGCCTGAAACAAGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR TCA 90 bp CTTGAAAGAGGAACCCTGATATTTCTGGGCGGGAACAACCCCGGCTaGGAGGAGAGCGCTGGGATTCCAGCTGCCAGGTTTCCAGCTGGG +
Preference number: 1 (lower is better)
Translates to: LERGTLIFLGGNNPG*EESAGIPAARFPAG
Trigger: CCCAGCTGGAAACCTGGCAGCTGGAATCCCAGCGCTCTCCTCTCAGCCGGGGTTGTTCCCGCCCAGAAATATCAGGGTTCCTCTTTCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR CCA 90 bp GGTAATCTGCGTTTCATGGGCAAAGCTGTGGCTGCTGTAGGGAGGTaGGGGGCTGTAGCGGGTATTGTCGTGTGTGTCGGTGTAGGCCTG +
Preference number: 1 (lower is better)
Translates to: GNLRFMGKAVAAVGR*GAVAGIVVCVGVGL
Trigger: CAGGCCTACACCGACACACACGACAATACCCGCTACAGCCCCCCACCTCCCTACAGCAGCCACAGCTTTGCCCATGAAACGCAGATTACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR CCA 90 bp AAACCTGTCAGCCAGGGACAGCCTCTGGCAGACACTCTGCATGGCTaGAGGGCACAGACTCCACGCAGGGATGCGTTTCTGGAACTAATG +
Preference number: 1 (lower is better)
Translates to: KPVSQGQPLADTLHG*RAQTPRRDAFLELM
Trigger: CATTAGTTCCAGAAACGCATCCCTGCGTGGAGTCTGTGCCCTCCAGCCATGCAGAGTGTCTGCCAGAGGCTGTCCCTGGCTGACAGGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR CCA 90 bp TCCTTCATGAATACCAAGGTAAACCTGTCAGCCAGGGACAGCCTCTaGCAGACACTCTGCATGGCTGGAGGGCACAGACTCCACGCAGGG +
Preference number: 1 (lower is better)
Translates to: SFMNTKVNLSARDSL*QTLCMAGGHRLHAG
Trigger: CCCTGCGTGGAGTCTGTGCCCTCCAGCCATGCAGAGTGTCTGCCAGAGGCTGTCCCTGGCTGACAGGTTTACCTTGGTATTCATGAAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR CCA 90 bp AATTTCCACTGCCTGTTGTACATGTATACATGGACACGGCTGGCCTaGAGTGCCGAGTCCAGGTGTTGTAGGAGCGCTTCTGTGGTCAGG +
Preference number: 1 (lower is better)
Translates to: NFHCLLYMYTWTRLA*SAESRCCRSASVVR
Trigger: CCTGACCACAGAAGCGCTCCTACAACACCTGGACTCGGCACTCCAGGCCAGCCGTGTCCATGTATACATGTACAACAGGCAGTGGAAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551623.1
3UTR CCA 90 bp GTTCCAATTTCCACTGCCTGTTGTACATGTATACATGGACACGGCTaGCCTGGAGTGCCGAGTCCAGGTGTTGTAGGAGCGCTTCTGTGG +
Preference number: 1 (lower is better)
Translates to: VPISTACCTCIHGHG*PGVPSPGVVGALLW
Trigger: CCACAGAAGCGCTCCTACAACACCTGGACTCGGCACTCCAGGCCAGCCGTGTCCATGTATACATGTACAACAGGCAGTGGAAATTGGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551623.1
3UTR TCA 90 bp CCTCTCCCTTCATCTGGGGGCTGGTTACACGGATGCGTTCCCATGTaGCCAATTCGCTGTGGCATGCACCTCCATAAAGACTGGCAAATA +
Preference number: 1 (lower is better)
Translates to: PLPSSGGWLHGCVPM*PIRCGMHLHKDWQI
Trigger: TATTTGCCAGTCTTTATGGAGGTGCATGCCACAGCGAATTGGTCACATGGGAACGCATCCGTGTAACCAGCCCCCAGATGAAGGGAGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430669.6
3UTR GCA 90 bp AAGCTTGGCACTCATTCTAAGAAGGCGGCCTCCATGATGCCAAATTaGCCAGTGGGCTATGCCACAGGCCAACCAATGGACTCATCTCTT +
Preference number: 1 (lower is better)
Translates to: KLGTHSKKAASMMPN*PVGYATGQPMDSSL
Trigger: AAGAGATGAGTCCATTGGTTGGCCTGTGGCATAGCCCACTGGGCAATTTGGCATCATGGAGGCCGCCTTCTTAGAATGAGTGCCAAGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR TCA 90 bp TCTGCAGTGTTTCTAACCCGAGACAATAATGGGCCACCTATTGGGTaGTCCTTTGGCTTCAAGCTGCAGAGTTGTCTTTGCTGCCAGCCC +
Preference number: 1 (lower is better)
Translates to: SAVFLTRDNNGPPIG*SFGFKLQSCLCCQP
Trigger: GGGCTGGCAGCAAAGACAACTCTGCAGCTTGAAGCCAAAGGATCACCCAATAGGTGGCCCATTATTGTCTCGGGTTAGAAACACTGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR GCA 90 bp AGCCGTCAGGTAGATGTAGAAAGCGCTGGGATTAATGATGCCATCTaGATCCACCAGACGCTGTTTAGTCAACTGGCTGATGTCGATGGG +
Preference number: 1 (lower is better)
Translates to: SRQVDVESAGINDAI*IHQTLFSQLADVDG
Trigger: CCCATCGACATCAGCCAGTTGACTAAACAGCGTCTGGTGGATGCAGATGGCATCATTAATCCCAGCGCTTTCTACATCTACCTGACGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR CCA 90 bp ATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATTGGGGTCCTaGATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAG +
Preference number: 1 (lower is better)
Translates to: IREKEIIPLKHKLGS*MAANDHKRCRRHEE
Trigger: CTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCATCCAGGACCCCAATTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR TCA 90 bp GTTGCTGCAGATGGTCCTTACTTTTTCAATTGCCTCCACAAAGTCTaGGGTGTCCCGCAAGCCGTTGAGGTAGAAAGGGAACTGGGCATA +
Preference number: 1 (lower is better)
Translates to: VAADGPYFFNCLHKV*GVPQAVEVERELGI
Trigger: TATGCCCAGTTCCCTTTCTACCTCAACGGCTTGCGGGACACCTCAGACTTTGTGGAGGCAATTGAAAAAGTAAGGACCATCTGCAGCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR GCA 90 bp GCAGAGTTCTATCCAAGAGCAGGTCCCTCACAAAGCCATGGAGGCTaGTCAAAGAAGCAAGTGGTTTCCTCCTCTGCAGTTCTCAAATTC +
Preference number: 1 (lower is better)
Translates to: AEFYPRAGPSQSHGG*SKKQVVSSSAVLKF
Trigger: GAATTTGAGAACTGCAGAGGAGGAAACCACTTGCTTCTTTGAGCAGCCTCCATGGCTTTGTGAGGGACCTGCTCTTGGATAGAACTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR TCA 90 bp GCTGCCGGTTTGCACCAGGAGTTTGTAGGCAAGGACTCCATCGTCTaGTCCATTCTTGTAATTGTTTGGCATGATTTTCCCGGTTTCCCA +
Preference number: 1 (lower is better)
Translates to: AAGLHQEFVGKDSIV*SILVIVWHDFPGFP
Trigger: TGGGAAACCGGGAAAATCATGCCAAACAATTACAAGAATGGATCAGACGATGGAGTCCTTGCCTACAAACTCCTGGTGCAAACCGGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR GCA 90 bp GGCCCAATCACAATGATTTCTAAAACATGTCTCCTTGCACACGCCTaGTTACCTGACAATGAAGTCGAACTCAGATCCCGCCAGCATCAG +
Preference number: 1 (lower is better)
Translates to: GPITMISKTCLLAHA*LPDNEVELRSRQHQ
Trigger: CTGATGCTGGCGGGATCTGAGTTCGACTTCATTGTCAGGTAAGCAGGCGTGTGCAAGGAGACATGTTTTAGAAATCATTGTGATTGGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR GCA 90 bp GAGACAATAATGGGCCACCTATTGGGTGATCCTTTGGCTTCAAGCTaGAGAGTTGTCTTTGCTGCCAGCCCCAAATCCTTTACCTTCTGT +
Preference number: 1 (lower is better)
Translates to: ETIMGHLLGDPLASS*RVVFAASPKSFTFC
Trigger: ACAGAAGGTAAAGGATTTGGGGCTGGCAGCAAAGACAACTCTGCAGCTTGAAGCCAAAGGATCACCCAATAGGTGGCCCATTATTGTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR TCA 90 bp ATGGCAGAGGAGGAGAGTGCAGAAGTAGTTCTGCTTTCCCACCATTaGGGGCTAAGGTCTGGAATCCTTCATGAATACCAAGGTAAACCT +
Preference number: 1 (lower is better)
Translates to: MAEEESAEVVLLSHH*GLRSGILHEYQGKP
Trigger: AGGTTTACCTTGGTATTCATGAAGGATTCCAGACCTTAGCCCTCAATGGTGGGAAAGCAGAACTACTTCTGCACTCTCCTCCTCTGCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR CCA 90 bp CTTAGACCCTCAGATGATTCCTCAGCACATCGGTGTGAGAAGCGCTaGTCTACAGCGATTCCACTTCACCATTCACTCTATGCAAAAACT +
Preference number: 1 (lower is better)
Translates to: LRPSDDSSAHRCEKR*STAIPLHHSLYAKT
Trigger: AGTTTTTGCATAGAGTGAATGGTGAAGTGGAATCGCTGTAGACCAGCGCTTCTCACACCGATGTGCTGAGGAATCATCTGAGGGTCTAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR CCA 90 bp TTGGGCAACTCTCTACTTGGTATTGGCAAACAGGAATTTAGGAACTaGCTTGCTGGCTTAGCAGTAGTTTGTGCTGAGAAGTCTAGCTCC +
Preference number: 1 (lower is better)
Translates to: LGNSLLGIGKQEFRN*LAGLAVVCAEKSSS
Trigger: GGAGCTAGACTTCTCAGCACAAACTACTGCTAAGCCAGCAAGCCAGTTCCTAAATTCCTGTTTGCCAATACCAAGTAGAGAGTTGCCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR TCA 90 bp AGGCAAGGACTCCATCGTCTGATCCATTCTTGTAATTGTTTGGCATaGTTTTCCCGGTTTCCCAGTCACTGTCAAATGCATCCTGAAGTC +
Preference number: 1 (lower is better)
Translates to: RQGLHRLIHSCNCLA*FSRFPSHCQMHPEV
Trigger: GACTTCAGGATGCATTTGACAGTGACTGGGAAACCGGGAAAATCATGCCAAACAATTACAAGAATGGATCAGACGATGGAGTCCTTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR GCA 90 bp ACATTAGTAAAAACCAAGCAGCCAATGTCTTGGTCTAATGTAAACTaGTGGAACTTTCGGCTGGGGCATGTATCAGCAGCCACATTAAGA +
Preference number: 1 (lower is better)
Translates to: TLVKTKQPMSWSNVN*WNFRLGHVSAATLR
Trigger: TCTTAATGTGGCTGCTGATACATGCCCCAGCCGAAAGTTCCAGCAGTTTACATTAGACCAAGACATTGGCTGCTTGGTTTTTACTAATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR CCA 90 bp TTAGTAAAAACCAAGCAGCCAATGTCTTGGTCTAATGTAAACTGCTaGAACTTTCGGCTGGGGCATGTATCAGCAGCCACATTAAGACAT +
Preference number: 1 (lower is better)
Translates to: LVKTKQPMSWSNVNC*NFRLGHVSAATLRH
Trigger: ATGTCTTAATGTGGCTGCTGATACATGCCCCAGCCGAAAGTTCCAGCAGTTTACATTAGACCAAGACATTGGCTGCTTGGTTTTTACTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR GCA 90 bp TCTACGTTAACAAGTTCAAAAGAAAGCAGAGTCACGATGACGAGGTaGTGCAATCTACCAGATACAGAAGGAAATAAGCAACGAAGATCA +
Preference number: 1 (lower is better)
Translates to: STLTSSKESRVTMTR*CNLPDTEGNKQRRS
Trigger: TGATCTTCGTTGCTTATTTCCTTCTGTATCTGGTAGATTGCAGCACCTCGTCATCGTGACTCTGCTTTCTTTTGAACTTGTTAACGTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR TCA 90 bp TTTCCCTGGCCTTTCATTAATCACAACTTTCTGCCTAGAATTCTGTaGGTTCCAGTTTTACCAAATAGCTCCAATTGCAACCTTTTTAGA +
Preference number: 1 (lower is better)
Translates to: FPWPFINHNFLPRIL*VPVLPNSSNCNLFR
Trigger: TCTAAAAAGGTTGCAATTGGAGCTATTTGGTAAAACTGGAACTCACAGAATTCTAGGCAGAAAGTTGTGATTAATGAAAGGCCAGGGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR GCA 90 bp CTGGGTGACTATATACATGTTGTAGAAAGAAAAGTATTTGAATTGTaGAGCAATAAAGTCATATTCTCTGGTTTCCCGAGGTACAATGTC +
Preference number: 1 (lower is better)
Translates to: LGDYIHVVERKVFEL*SNKVIFSGFPRYNV
Trigger: GACATTGTACCTCGGGAAACCAGAGAATATGACTTTATTGCTGCACAATTCAAATACTTTTCTTTCTACAACATGTATATAGTCACCCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR CAA 90 bp AGTGGAGTGGGCGAAGACGGGGTTTTCTGTGGCTTCCACGATCACTaGGTGGGCAGGGCCTCCCGCGCCCTGCTGGGCCTCGTAGTGCCG +
Preference number: 2 (lower is better)
Translates to: SGVGEDGVFCGFHDH*VGRASRALLGLVVP
Trigger: CGGCACTACGAGGCCCAGCAGGGCGCGGGAGGCCCTGCCCACCAAGTGATCGTGGAAGCCACAGAAAACCCCGTCTTCGCCCACTCCACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR CCA 90 bp CTCCGAGTCGGAGGAATCAGACCCGCTGTGCGTGTGGCCGGGCGGCATGGCGAAAAGGCCGCAGCACCATaGCAGAGGAGGAGAGTGCAG +
Preference number: 2 (lower is better)
Translates to: LRVGGIRPAVRVAGRHGEKAAAP*QRRRVQ
Trigger: CTGCACTCTCCTCCTCTGCCATGGTGCTGCGGCCTT...TTCGCCATGCCGCCCGGCCACACGCACAGCGGGTCTGATTCCTCCGACTCGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR GCA 90 bp CTCCGAGTCGGAGGAATCAGACCCGCTGTGCGTGTGGCCGGGCGGCATGGCGAACCACAATGGCGGGGCTaGTCTGCGGGCCAATCTTTT +
Preference number: 2 (lower is better)
Translates to: LRVGGIRPAVRVAGRHGEPQWRG*SAGQSF
Trigger: AAAAGATTGGCCCGCAGAGCAGCCCCGCCATTGTGG...TTCGCCATGCCGCCCGGCCACACGCACAGCGGGTCTGATTCCTCCGACTCGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR CCA 90 bp CTCCGAGTCGGAGGAATCAGACCCGCTGTGCGTGTGGCCGGGCGGCATGGCGAATGGTGTGGATTTGGATaGGGAGCCGACACTGGGTGC +
Preference number: 2 (lower is better)
Translates to: LRVGGIRPAVRVAGRHGEWCGFG*GADTGC
Trigger: GCACCCAGTGTCGGCTCCCCATCCAAATCCACACCA...TTCGCCATGCCGCCCGGCCACACGCACAGCGGGTCTGATTCCTCCGACTCGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR CCA 90 bp CGGGGTTTTCTGTGGCTTCCACGATCACTTGGTGGGCAGGGCCTCCCGCGCCCTGACACTCTGCATGGCTaGAGGGCACAGACTCCACGC +
Preference number: 2 (lower is better)
Translates to: RGFLWLPRSLGGQGLPRPDTLHG*RAQTPR
Trigger: GCGTGGAGTCTGTGCCCTCCAGCCATGCAGAGTGTC...AGGGCGCGGGAGGCCCTGCCCACCAAGTGATCGTGGAAGCCACAGAAAACCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR CCA 90 bp CGGGGTTTTCTGTGGCTTCCACGATCACTTGGTGGGCAGGGCCTCCCGCGCCCTGGCAGACACTCTGCATaGCTGGAGGGCACAGACTCC +
Preference number: 2 (lower is better)
Translates to: RGFLWLPRSLGGQGLPRPGRHSA*LEGTDS
Trigger: GGAGTCTGTGCCCTCCAGCCATGCAGAGTGTCTGCC...AGGGCGCGGGAGGCCCTGCCCACCAAGTGATCGTGGAAGCCACAGAAAACCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR CCA 90 bp GGGGCTGCTTGTGACCTCTCCCTTCATCTGGGGGCTGGTTACACGGATGCGTTCCACTGGGGTCCAGCGTaGGATGTGCCCGAGCGCCAC +
Preference number: 2 (lower is better)
Translates to: GAACDLSLHLGAGYTDAFHWGPA*DVPERH
Trigger: GTGGCGCTCGGGCACATCCCACGCTGGACCCCAGTG...GAACGCATCCGTGTAACCAGCCCCCAGATGAAGGGAGAGGTCACAAGCAGCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000430669.6
3UTR-3UTR TCA 90 bp CTCCGAGTCGGAGGAATCAGACCCGCTGTGCGTGTGGCCGGGCGGCATGGCGAATGGCAACGCCAGAAATaGACAAAACCCACCCCACTG +
Preference number: 2 (lower is better)
Translates to: LRVGGIRPAVRVAGRHGEWQRQK*TKPTPL
Trigger: CAGTGGGGTGGGTTTTGTTCATTTCTGGCGTTGCCA...TTCGCCATGCCGCCCGGCCACACGCACAGCGGGTCTGATTCCTCCGACTCGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR CCA 90 bp CTCCGAGTCGGAGGAATCAGACCCGCTGTGCGTGTGGCCGGGCGGCATGGCGAAGCCTACATCTTTCAGTaGGGTGTGTCCATCCTCCTG +
Preference number: 2 (lower is better)
Translates to: LRVGGIRPAVRVAGRHGEAYIFQ*GVSILL
Trigger: CAGGAGGATGGACACACCCCACTGAAAGATGTAGGC...TTCGCCATGCCGCCCGGCCACACGCACAGCGGGTCTGATTCCTCCGACTCGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR TCA 90 bp ACACACGCACGCACGCACACACACACACACACACCCAGCAGCCACAAGCGGCTCGGCCACATCCACTCTTaGATTTGGGGGTGTTGGGGG +
Preference number: 2 (lower is better)
Translates to: THARTHTHTHTPSSHKRLGHIHS*IWGCWG
Trigger: CCCCCAACACCCCCAAATTCAAGAGTGGATGTGGCC...GAGCCGCTTGTGGCTGCTGGGTGTGTGTGTGTGTGTGTGCGTGCGTGCGTGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR TCA 90 bp TGGGGTCCTGGATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAAGTGGGGTGTGGGCCTaGGGTGTCCCTGGGGGCTGC +
Preference number: 2 (lower is better)
Translates to: WGPGWQPMIIRDAVDTRRSGVWA*GVPGGC
Trigger: GCAGCCCCCAGGGACACCTCAGGCCCACACCCCACT...TCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCATCCAGGACCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000430669.6
3UTR-3UTR GCA 90 bp ACACGCACAGCCAAACAAGAGGACCGCACACAACGACACCTAGAGAAGCCACCAGTCCAGCGTGGGATGTaGCCGAGCGCCACAGCCCCT +
Preference number: 2 (lower is better)
Translates to: TRTAKQEDRTQRHLEKPPVQRGM*PSATAP
Trigger: AGGGGCTGTGGCGCTCGGGCACATCCCACGCTGGAC...TGGTGGCTTCTCTAGGTGTCGTTGTGTGCGGTCCTCTTGTTTGGCTGTGCGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430669.6
3UTR-3UTR CCA 90 bp ACACACGCACGCACGCACACACACACACACACACCCAGCAGCCACAAGCGGCTCGTGCTGGTGTGGATTTaGATGGGGAGCCGACACTGG +
Preference number: 2 (lower is better)
Translates to: THARTHTHTHTPSSHKRLVLVWI*MGSRHW
Trigger: CCAGTGTCGGCTCCCCATCCAAATCCACACCAGCAC...GAGCCGCTTGTGGCTGCTGGGTGTGTGTGTGTGTGTGTGCGTGCGTGCGTGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR CCA 90 bp GACACTGTCGTCTGGGAACTATACTCCGAGTCGGAGGAATCAGACCCGCTGTGCGGCCGGATGTTGGCCTaGGAGGCAGCATACGCGACG +
Preference number: 2 (lower is better)
Translates to: DTVVWELYSESEESDPLCGRMLA*EAAYAT
Trigger: CGTCGCGTATGCTGCCTCCCAGGCCAACATCCGGCC...GCACAGCGGGTCTGATTCCTCCGACTCGGAGTATAGTTCCCAGACGACAGTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR TCA 90 bp ACACACGCACGCACGCACACACACACACACACACCCAGCAGCCACAAGCGGCTCTCTCTGGTTACGAGATaGGGGAGCCCACACCTCAGA +
Preference number: 2 (lower is better)
Translates to: THARTHTHTHTPSSHKRLSLVTR*GSPHLR
Trigger: TCTGAGGTGTGGGCTCCCTCATCTCGTAACCAGAGA...GAGCCGCTTGTGGCTGCTGGGTGTGTGTGTGTGTGTGTGCGTGCGTGCGTGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR TCA 90 bp CTCCGAGTCGGAGGAATCAGACCCGCTGTGCGTGTGGCCGGGCGGCATGGCGAAACAACCTCTCAGTACTaGAGCGTGCCAAACAAACCA +
Preference number: 2 (lower is better)
Translates to: LRVGGIRPAVRVAGRHGETTSQY*SVPNKP
Trigger: TGGTTTGTTTGGCACGCTTCAGTACTGAGAGGTTGT...TTCGCCATGCCGCCCGGCCACACGCACAGCGGGTCTGATTCCTCCGACTCGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR GCA 90 bp CTCCGAGTCGGAGGAATCAGACCCGCTGTGCGTGTGGCCGGGCGGCATGGCGAAACAGTAACAATGAACTaGTGTCCTGGCACAGGGCAT +
Preference number: 2 (lower is better)
Translates to: LRVGGIRPAVRVAGRHGETVTMN*CPGTGH
Trigger: ATGCCCTGTGCCAGGACAGCAGTTCATTGTTACTGT...TTCGCCATGCCGCCCGGCCACACGCACAGCGGGTCTGATTCCTCCGACTCGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR GCA 90 bp ACTCTGCATGGCTGGAGGGCACAGACTCCACGCAGGGATGCGTTTCTGGAACTAGGGCAAGCACAGCCCTaGGGTTCTTGTCGCCGATGG +
Preference number: 2 (lower is better)
Translates to: TLHGWRAQTPRRDAFLELGQAQP*GSCRRW
Trigger: CCATCGGCGACAAGAACCGCAGGGCTGTGCTTGCCC...TAGTTCCAGAAACGCATCCCTGCGTGGAGTCTGTGCCCTCCAGCCATGCAGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR GCA 90 bp GGCTCAGGGGAGGGTGTGGGCAGGCGGTTCAAGCCGTTGGCTGGAGACACCTCACTGCAGAGTTGTCTTTaGTGCCAGCCCCAAATCCTT +
Preference number: 2 (lower is better)
Translates to: GSGEGVGRRFKPLAGDTSLQSCL*CQPQIL
Trigger: AAGGATTTGGGGCTGGCAGCAAAGACAACTCTGCAG...TGAGGTGTCTCCAGCCAACGGCTTGAACCGCCTGCCCACACCCTCCCCTGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR CCA 90 bp ACACACGCACGCACGCACACACACACACACACACCCAGCAGCCACAAGCGGCTCGGATGGCAGACCATGTaGGTGACAGGCACCAAGACA +
Preference number: 2 (lower is better)
Translates to: THARTHTHTHTPSSHKRLGWQTM*VTGTKT
Trigger: TGTCTTGGTGCCTGTCACCCACATGGTCTGCCATCC...GAGCCGCTTGTGGCTGCTGGGTGTGTGTGTGTGTGTGTGCGTGCGTGCGTGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR CCA 90 bp CGCCACCCTCCGTGTGCCCGACACAGCAGCATGGCAACGCCAGAAATGAACAAAGTGCTCTCTGGGCTCTaGCAGCTGAGGGTGTCCTGT +
Preference number: 2 (lower is better)
Translates to: RHPPCARHSSMATPEMNKVLSGL*QLRVSC
Trigger: ACAGGACACCCTCAGCTGCCAGAGCCCAGAGAGCAC...TTTGTTCATTTCTGGCGTTGCCATGCTGCTGTGTCGGGCACACGGAGGGTGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR CCA 90 bp CGCCACCCTCCGTGTGCCCGACACAGCAGCATGGCAACGCCAGAAATGAACAAAAGAGCAGGTCCCTTGTaGAGCTGGTGCTCTCTGGGC +
Preference number: 2 (lower is better)
Translates to: RHPPCARHSSMATPEMNKRAGPL*SWCSLG
Trigger: GCCCAGAGAGCACCAGCTCCACAAGGGACCTGCTCT...TTTGTTCATTTCTGGCGTTGCCATGCTGCTGTGTCGGGCACACGGAGGGTGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR CCA 90 bp ACACACGCACGCACGCACACACACACACACACACCCAGCAGCCACAAGCGGCTCACCTCTCCCTTCATCTaGGGGCTGGTTACACGGATG +
Preference number: 2 (lower is better)
Translates to: THARTHTHTHTPSSHKRLTSPFI*GLVTRM
Trigger: CATCCGTGTAACCAGCCCCCAGATGAAGGGAGAGGT...GAGCCGCTTGTGGCTGCTGGGTGTGTGTGTGTGTGTGTGCGTGCGTGCGTGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430669.6
3UTR-3UTR CCA 90 bp TGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCGGCCTGAGGTGTCCCTaGGGGCTGCTTGTGACCTCT +
Preference number: 2 (lower is better)
Translates to: WPSQGSALGMSPNSLTPTGLRCP*GLLVTS
Trigger: AGAGGTCACAAGCAGCCCCCAGGGACACCTCAGGCC...GGTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430669.6
3UTR-3UTR TCA 90 bp ACACACGCACGCACGCACACACACACACACACACCCAGCAGCCACAAGCGGCTCCCCACCATGATGAACTaGTGTGAGCTCCATACCCTG +
Preference number: 2 (lower is better)
Translates to: THARTHTHTHTPSSHKRLPTMMN*CELHTL
Trigger: CAGGGTATGGAGCTCACATCAGTTCATCATGGTGGG...GAGCCGCTTGTGGCTGCTGGGTGTGTGTGTGTGTGTGTGCGTGCGTGCGTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR TCA 90 bp CTCCGAGTCGGAGGAATCAGACCCGCTGTGCGTGTGGCCGGGCGGCATGGCGAACCGGCCCAATCACAATaGTTTCTAAAACATGTCTCC +
Preference number: 2 (lower is better)
Translates to: LRVGGIRPAVRVAGRHGEPAQSQ*FLKHVS
Trigger: GGAGACATGTTTTAGAAATCATTGTGATTGGGCCGG...TTCGCCATGCCGCCCGGCCACACGCACAGCGGGTCTGATTCCTCCGACTCGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR TCA 90 bp TGCCTGGATTCGGGATGGACCACAGTGGAGTGGGCGAAGACGGGGTTTTCTGTGCCCTCCTGTAACTCATaGGACCCCAGCACACCTTGC +
Preference number: 2 (lower is better)
Translates to: CLDSGWTTVEWAKTGFSVPSCNS*DPSTPC
Trigger: GCAAGGTGTGCTGGGGTCTCATGAGTTACAGGAGGG...CACAGAAAACCCCGTCTTCGCCCACTCCACTGTGGTCCATCCCGAATCCAGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR GCA 90 bp ACACACGCACGCACGCACACACACACACACACACCCAGCAGCCACAAGCGGCTCGGTCTGAGGTCACTATaGTGTGGGTATTTCTGGGGG +
Preference number: 2 (lower is better)
Translates to: THARTHTHTHTPSSHKRLGLRSL*CGYFWG
Trigger: CCCCCAGAAATACCCACAGCATAGTGACCTCAGACC...GAGCCGCTTGTGGCTGCTGGGTGTGTGTGTGTGTGTGTGCGTGCGTGCGTGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR GCA 90 bp CGGGGTTTTCTGTGGCTTCCACGATCACTTGGTGGGCAGGGCCTCCCGCGCCCTGGGGTCCCCATTATTTaGTGTTGTGCAAATGGCACT +
Preference number: 2 (lower is better)
Translates to: RGFLWLPRSLGGQGLPRPGVPII*CCANGT
Trigger: AGTGCCATTTGCACAACAGCAAATAATGGGGACCCC...AGGGCGCGGGAGGCCCTGCCCACCAAGTGATCGTGGAAGCCACAGAAAACCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR GCA 90 bp CGCCACCCTCCGTGTGCCCGACACAGCAGCATGGCAACGCCAGAAATGAACAAACTCTGGCAGACACTCTaGATGGCTGGAGGGCACAGA +
Preference number: 2 (lower is better)
Translates to: RHPPCARHSSMATPEMNKLWQTL*MAGGHR
Trigger: TCTGTGCCCTCCAGCCATGCAGAGTGTCTGCCAGAG...TTTGTTCATTTCTGGCGTTGCCATGCTGCTGTGTCGGGCACACGGAGGGTGGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR CCA 90 bp CGGGGTTTTCTGTGGCTTCCACGATCACTTGGTGGGCAGGGCCTCCCGCGCCCTAATGAACTGCTGTCCTaGCACAGGGCATCTTTTCCA +
Preference number: 2 (lower is better)
Translates to: RGFLWLPRSLGGQGLPRPNELLS*HRASFP
Trigger: TGGAAAAGATGCCCTGTGCCAGGACAGCAGTTCATT...AGGGCGCGGGAGGCCCTGCCCACCAAGTGATCGTGGAAGCCACAGAAAACCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR CCA 90 bp ACACACGCACGCACGCACACACACACACACACACCCAGCAGCCACAAGCGGCTCGCCTACATCTTTCAGTaGGGTGTGTCCATCCTCCTG +
Preference number: 2 (lower is better)
Translates to: THARTHTHTHTPSSHKRLAYIFQ*GVSILL
Trigger: CAGGAGGATGGACACACCCCACTGAAAGATGTAGGC...GAGCCGCTTGTGGCTGCTGGGTGTGTGTGTGTGTGTGTGCGTGCGTGCGTGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR CCA 90 bp ACACACGCACGCACGCACACACACACACACACACCCAGCAGCCACAAGCGGCTCGAGGTCACTATGCTGTaGGTATTTCTGGGGGCCCAT +
Preference number: 2 (lower is better)
Translates to: THARTHTHTHTPSSHKRLEVTML*VFLGAH
Trigger: ATGGGCCCCCAGAAATACCCACAGCATAGTGACCTC...GAGCCGCTTGTGGCTGCTGGGTGTGTGTGTGTGTGTGTGCGTGCGTGCGTGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR CCA 90 bp ACACACGCACGCACGCACACACACACACACACACCCAGCAGCCACAAGCGGCTCAGCTGGGTGTTAGGATaGCAGACCATGTGGGTGACA +
Preference number: 2 (lower is better)
Translates to: THARTHTHTHTPSSHKRLSWVLG*QTMWVT
Trigger: TGTCACCCACATGGTCTGCCATCCTAACACCCAGCT...GAGCCGCTTGTGGCTGCTGGGTGTGTGTGTGTGTGTGTGCGTGCGTGCGTGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR CCA 90 bp TGCCTGGATTCGGGATGGACCACAGTGGAGTGGGCGAAGACGGGGTTTTCTGTGCTGGAGTCGGAGAACTaGGAGAGCAGGTCCCTTGTG +
Preference number: 2 (lower is better)
Translates to: CLDSGWTTVEWAKTGFSVLESEN*ESRSLV
Trigger: CACAAGGGACCTGCTCTCCCAGTTCTCCGACTCCAG...CACAGAAAACCCCGTCTTCGCCCACTCCACTGTGGTCCATCCCGAATCCAGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR CCA 90 bp GGGGCTGCTTGTGACCTCTCCCTTCATCTGGGGGCTGGTTACACGGATGCGTTCGGGATAAAAGGTCACTaGGGTCCAGCGTGGGATGTG +
Preference number: 2 (lower is better)
Translates to: GAACDLSLHLGAGYTDAFGIKGH*GPAWDV
Trigger: CACATCCCACGCTGGACCCCAGTGACCTTTTATCCC...GAACGCATCCGTGTAACCAGCCCCCAGATGAAGGGAGAGGTCACAAGCAGCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000430669.6
3UTR CAA 90 bp ATGCCAACAGAAGCGATCAGGATGACCACGGGCACGGCACTGAGCTaGATTCCGATGAGGCCCATCATGCCGAACAGCTCGACCGTCATC +
Preference number: 2 (lower is better)
Translates to: MPTEAIRMTTGTALS*IPMRPIMPNSSTVI
Trigger: GATGACGGTCGAGCTGTTCGGCATGATGGGCCTCATCGGAATCAAGCTCAGTGCCGTGCCCGTGGTCATCCTGATCGCTTCTGTTGGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR TCA 90 bp ACACACGCACGCACGCACACACACACACACACACCCAGCAGCCACAAGCGGCTCAGGAGATTATCCCCCTaGAGCACAAATTGGGGTCCT +
Preference number: 2 (lower is better)
Translates to: THARTHTHTHTPSSHKRLRRLSP*STNWGP
Trigger: AGGACCCCAATTTGTGCTTCAGGGGGATAATCTCCT...GAGCCGCTTGTGGCTGCTGGGTGTGTGTGTGTGTGTGTGCGTGCGTGCGTGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR TCA 90 bp TGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCGGCCACATCCACTCTTaGATTTGGGGGTGTTGGGGG +
Preference number: 2 (lower is better)
Translates to: WPSQGSALGMSPNSLTPTGHIHS*IWGCWG
Trigger: CCCCCAACACCCCCAAATTCAAGAGTGGATGTGGCC...GGTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR TCA 90 bp TGGGGTCCTGGATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGACCTGGGGGCTGCTTGTaGCCTCTCCCTTCATCTGGG +
Preference number: 2 (lower is better)
Translates to: WGPGWQPMIIRDAVDTRRPGGCL*PLPSSG
Trigger: CCCAGATGAAGGGAGAGGTCACAAGCAGCCCCCAGG...TCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCATCCAGGACCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430669.6
3UTR-3UTR GCA 90 bp TGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCTGGCACGGAGCCCAATaGACAAATACGGAGAGGCCC +
Preference number: 2 (lower is better)
Translates to: WPSQGSALGMSPNSLTPTWHGAQ*TNTERP
Trigger: GGGCCTCTCCGTATTTGTGCATTGGGCTCCGTGCCA...GGTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR GCA 90 bp TCAGATCCCGCCAGCATCAGCACTCCCAGCAGAGTGGACACGGCGCCATCCAGGAGCTGGACAGTGGACTaGATGGTAATCTGCGTTTCA +
Preference number: 2 (lower is better)
Translates to: SDPASISTPSRVDTAPSRSWTVD*MVICVS
Trigger: TGAAACGCAGATTACCATGCAGTCCACTGTCCAGCT...CCTGGATGGCGCCGTGTCCACTCTGCTGGGAGTGCTGATGCTGGCGGGATCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR GCA 90 bp ACTCTGCATGGCTGGAGGGCACAGACTCCACGCAGGGATGCGTTTCTGGAACTATGGGCTTATCGCGGCTaGCGGTTTGCACCAGGAGTT +
Preference number: 2 (lower is better)
Translates to: TLHGWRAQTPRRDAFLELWAYRG*RFAPGV
Trigger: AACTCCTGGTGCAAACCGGCAGCCGCGATAAGCCCA...TAGTTCCAGAAACGCATCCCTGCGTGGAGTCTGTGCCCTCCAGCCATGCAGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR GCA 90 bp TGGGGTCCTGGATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAGTGTCCTTGTGGCGCTaGACCGACCCTCCGCAGGTT +
Preference number: 2 (lower is better)
Translates to: WGPGWQPMIIRDAVDTRRVSLWR*TDPPQV
Trigger: AACCTGCGGAGGGTCGGTGCAGCGCCACAAGGACAC...TCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCATCCAGGACCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430669.6
3UTR-3UTR CCA 90 bp TCAGATCCCGCCAGCATCAGCACTCCCAGCAGAGTGGACACGGCGCCATCCAGGAAGACTAATGAAGCTTaGTTGTGGCACGGAGCCCAA +
Preference number: 2 (lower is better)
Translates to: SDPASISTPSRVDTAPSRKTNEA*LWHGAQ
Trigger: TTGGGCTCCGTGCCACAACCAAGCTTCATTAGTCTT...CCTGGATGGCGCCGTGTCCACTCTGCTGGGAGTGCTGATGCTGGCGGGATCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR CCA 90 bp GACACTGTCGTCTGGGAACTATACTCCGAGTCGGAGGAATCAGACCCGCTGTGCGTGCTGGTGTGGATTTaGATGGGGAGCCGACACTGG +
Preference number: 2 (lower is better)
Translates to: DTVVWELYSESEESDPLCVLVWI*MGSRHW
Trigger: CCAGTGTCGGCTCCCCATCCAAATCCACACCAGCAC...GCACAGCGGGTCTGATTCCTCCGACTCGGAGTATAGTTCCCAGACGACAGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR CCA 90 bp ACACACGCACGCACGCACACACACACACACACACCCAGCAGCCACAAGCGGCTCTGCTGTGGGTATTTCTaGGGGCCCATTACCTTTCTG +
Preference number: 2 (lower is better)
Translates to: THARTHTHTHTPSSHKRLCCGYF*GPITFL
Trigger: CAGAAAGGTAATGGGCCCCCAGAAATACCCACAGCA...GAGCCGCTTGTGGCTGCTGGGTGTGTGTGTGTGTGTGTGCGTGCGTGCGTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR CCA 90 bp GACACTGTCGTCTGGGAACTATACTCCGAGTCGGAGGAATCAGACCCGCTGTGCAGCCGTTGGGGTAACTaGACAGCCCCAGGCTCGTAT +
Preference number: 2 (lower is better)
Translates to: DTVVWELYSESEESDPLCSRWGN*TAPGSY
Trigger: ATACGAGCCTGGGGCTGTCCAGTTACCCCAACGGCT...GCACAGCGGGTCTGATTCCTCCGACTCGGAGTATAGTTCCCAGACGACAGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR CCA 90 bp GGCCGCAGCACCATGGCAGAGGAGGAGAGTGCAGAAGTAGTTCTGCTTTCCCACGGTTCTTGTCGCCGATaGCCGTCAGAAAGGCCAAAG +
Preference number: 2 (lower is better)
Translates to: GRSTMAEEESAEVVLLSHGSCRR*PSERPK
Trigger: CTTTGGCCTTTCTGACGGCCATCGGCGACAAGAACC...GTGGGAAAGCAGAACTACTTCTGCACTCTCCTCCTCTGCCATGGTGCTGCGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR CCA 90 bp ATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATTGGGGTCCTGGATGGCAGCACGGAGCTGCCCATaGCAGTGGACGCTGGGTTCC +
Preference number: 2 (lower is better)
Translates to: IREKEIIPLKHKLGSWMAARSCP*QWTLGS
Trigger: GGAACCCAGCGTCCACTGCCATGGGCAGCTCCGTGC...TGCCATCCAGGACCCCAATTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR TCA 90 bp CAGAGTTCTATCCAAGAGCAGGTCCCTCACAAAGCCATGGAGGCTGCTCAAAGACGACGGGGTCGTTGCTaGCCCAAGCCGTCAGGTAGA +
Preference number: 2 (lower is better)
Translates to: QSSIQEQVPHKAMEAAQRRRGRC*PKPSGR
Trigger: TCTACCTGACGGCTTGGGTCAGCAACGACCCCGTCG...TCTTTGAGCAGCCTCCATGGCTTTGTGAGGGACCTGCTCTTGGATAGAACTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR GCA 90 bp ATGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACTGGCACGGAGCCCAATaGACAAATACGGAGAGGCCC +
Preference number: 2 (lower is better)
Translates to: MAQPRLSTRHVTEFSNTHWHGAQ*TNTERP
Trigger: GGGCCTCTCCGTATTTGTGCATTGGGCTCCGTGCCA...GTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR GCA 90 bp ACACGCACAGCCAAACAAGAGGACCGCACACAACGACACCTAGAGAAGCCACCATGGCACGGAGCCCAATaGACAAATACGGAGAGGCCC +
Preference number: 2 (lower is better)
Translates to: TRTAKQEDRTQRHLEKPPWHGAQ*TNTERP
Trigger: GGGCCTCTCCGTATTTGTGCATTGGGCTCCGTGCCA...TGGTGGCTTCTCTAGGTGTCGTTGTGTGCGGTCCTCTTGTTTGGCTGTGCGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR GCA 90 bp ACACACGCACGCACGCACACACACACACACACACCCAGCAGCCACAAGCGGCTCGGAGAGTCTAGCTTTTaGCGGGCTGATTTGAAAGGA +
Preference number: 2 (lower is better)
Translates to: THARTHTHTHTPSSHKRLGESSF*RADLKG
Trigger: TCCTTTCAAATCAGCCCGGCAAAAGCTAGACTCTCC...GAGCCGCTTGTGGCTGCTGGGTGTGTGTGTGTGTGTGTGCGTGCGTGCGTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR CCA 90 bp ACACACGCACGCACGCACACACACACACACACACCCAGCAGCCACAAGCGGCTCAATGAACTGCTGTCCTaGCACAGGGCATCTTTTCCA +
Preference number: 2 (lower is better)
Translates to: THARTHTHTHTPSSHKRLNELLS*HRASFP
Trigger: TGGAAAAGATGCCCTGTGCCAGGACAGCAGTTCATT...GAGCCGCTTGTGGCTGCTGGGTGTGTGTGTGTGTGTGTGCGTGCGTGCGTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR CCA 90 bp ACACACGCACGCACGCACACACACACACACACACCCAGCAGCCACAAGCGGCTCAAGACTAATGAAGCTTaGTTGTGGCACGGAGCCCAA +
Preference number: 2 (lower is better)
Translates to: THARTHTHTHTPSSHKRLKTNEA*LWHGAQ
Trigger: TTGGGCTCCGTGCCACAACCAAGCTTCATTAGTCTT...GAGCCGCTTGTGGCTGCTGGGTGTGTGTGTGTGTGTGTGCGTGCGTGCGTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR CCA 90 bp ACACACGCACGCACGCACACACACACACACACACCCAGCAGCCACAAGCGGCTCCACAAATTGGGGTCCTaGATGGCAGCCAATGATCAT +
Preference number: 2 (lower is better)
Translates to: THARTHTHTHTPSSHKRLHKLGS*MAANDH
Trigger: ATGATCATTGGCTGCCATCCAGGACCCCAATTTGTG...GAGCCGCTTGTGGCTGCTGGGTGTGTGTGTGTGTGTGTGCGTGCGTGCGTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR CCA 90 bp TGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCGGGTCGTGTGTGTGTTaGTCAGAAGAGGGGCACCAT +
Preference number: 2 (lower is better)
Translates to: WPSQGSALGMSPNSLTPTGSCVC*SEEGHH
Trigger: ATGGTGCCCCTCTTCTGACCAACACACACACGACCC...GGTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR CCA 90 bp GGCTCAGGGGAGGGTGTGGGCAGGCGGTTCAAGCCGTTGGCTGGAGACACCTCATCAAAACATCATTTCTaGGAGACTGTGGGCCAAGAA +
Preference number: 2 (lower is better)
Translates to: GSGEGVGRRFKPLAGDTSSKHHF*ETVGQE
Trigger: TTCTTGGCCCACAGTCTCCCAGAAATGATGTTTTGA...TGAGGTGTCTCCAGCCAACGGCTTGAACCGCCTGCCCACACCCTCCCCTGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR TCA 90 bp ACACACGCACGCACGCACACACACACACACACACCCAGCAGCCACAAGCGGCTCCAGCATCCATCACAATaGTCCGAGAGAAGGAGATTA +
Preference number: 2 (lower is better)
Translates to: THARTHTHTHTPSSHKRLQHPSQ*SERRRL
Trigger: TAATCTCCTTCTCTCGGATCATTGTGATGGATGCTG...GAGCCGCTTGTGGCTGCTGGGTGTGTGTGTGTGTGTGTGCGTGCGTGCGTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR TCA 90 bp TGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCCCCACCATGATGAACTaGTGTGAGCTCCATACCCTG +
Preference number: 2 (lower is better)
Translates to: WPSQGSALGMSPNSLTPTPTMMN*CELHTL
Trigger: CAGGGTATGGAGCTCACATCAGTTCATCATGGTGGG...GGTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR TCA 90 bp ATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATTGGGGTCCTGGATGGCAGGCAGACCATGTGGGTaGCAGGCACCAAGACAGCAG +
Preference number: 2 (lower is better)
Translates to: IREKEIIPLKHKLGSWMAGRPCG*QAPRQQ
Trigger: CTGCTGTCTTGGTGCCTGTCACCCACATGGTCTGCC...TGCCATCCAGGACCCCAATTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR TCA 90 bp CGGGGTTTTCTGTGGCTTCCACGATCACTTGGTGGGCAGGGCCTCCCGCGCCCTAGTCTGCTTTCTGGGTaGCTATATACATGTTGTAGA +
Preference number: 2 (lower is better)
Translates to: RGFLWLPRSLGGQGLPRPSLLSG*LYTCCR
Trigger: TCTACAACATGTATATAGTCACCCAGAAAGCAGACT...AGGGCGCGGGAGGCCCTGCCCACCAAGTGATCGTGGAAGCCACAGAAAACCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR TCA 90 bp TGCCTGGATTCGGGATGGACCACAGTGGAGTGGGCGAAGACGGGGTTTTCTGTGCCTGAAGCCAGTCTCTaGAGTAGTGCAGCCACATTT +
Preference number: 2 (lower is better)
Translates to: CLDSGWTTVEWAKTGFSVPEASL*SSAATF
Trigger: AAATGTGGCTGCACTACTTCAGAGACTGGCTTCAGG...CACAGAAAACCCCGTCTTCGCCCACTCCACTGTGGTCCATCCCGAATCCAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR TCA 90 bp TGCCTGGATTCGGGATGGACCACAGTGGAGTGGGCGAAGACGGGGTTTTCTGTGAAAGCAGAGTCACGATaGCGAGGTGCTGCAATCTAC +
Preference number: 2 (lower is better)
Translates to: CLDSGWTTVEWAKTGFSVKAESR*RGAAIY
Trigger: GTAGATTGCAGCACCTCGTCATCGTGACTCTGCTTT...CACAGAAAACCCCGTCTTCGCCCACTCCACTGTGGTCCATCCCGAATCCAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR GCA 90 bp TGGGGTCCTGGATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGATGGCACGGAGCCCAATaGACAAATACGGAGAGGCCC +
Preference number: 2 (lower is better)
Translates to: WGPGWQPMIIRDAVDTRRWHGAQ*TNTERP
Trigger: GGGCCTCTCCGTATTTGTGCATTGGGCTCCGTGCCA...TCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCATCCAGGACCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR GCA 90 bp ACTCTGCATGGCTGGAGGGCACAGACTCCACGCAGGGATGCGTTTCTGGAACTAGTTCGAGCAATTCTCTaGCTCAGCCTCCCAAGTAGC +
Preference number: 2 (lower is better)
Translates to: TLHGWRAQTPRRDAFLELVRAIL*LSLPSS
Trigger: GCTACTTGGGAGGCTGAGGCAGAGAATTGCTCGAAC...TAGTTCCAGAAACGCATCCCTGCGTGGAGTCTGTGCCCTCCAGCCATGCAGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR GCA 90 bp AGGATGGTGAGGATCGCCAGCACAGCAAAGAAATACCTGGGAGATCAAGAGGAACGCTGGGATTCCAGCTaGCAGGTTTCCAGCTGGGGG +
Preference number: 2 (lower is better)
Translates to: RMVRIASTAKKYLGDQEERWDSS*QVSSWG
Trigger: CCCCCAGCTGGAAACCTGGCAGCTGGAATCCCAGCG...TTCCTCTTGATCTCCCAGGTATTTCTTTGCTGTGCTGGCGATCCTCACCATCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR CCA 90 bp ATGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACGGAAAGAGGTGGGGGTaGGGGGTTTCCAATCTTTGG +
Preference number: 2 (lower is better)
Translates to: MAQPRLSTRHVTEFSNTHGKRWG*GVSNLW
Trigger: CCAAAGATTGGAAACCCCCCACCCCCACCTCTTTCC...GTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR CCA 90 bp ACACGCACAGCCAAACAAGAGGACCGCACACAACGACACCTAGAGAAGCCACCAGGGTCGTGTGTGTGTTaGTCAGAAGAGGGGCACCAT +
Preference number: 2 (lower is better)
Translates to: TRTAKQEDRTQRHLEKPPGSCVC*SEEGHH
Trigger: ATGGTGCCCCTCTTCTGACCAACACACACACGACCC...TGGTGGCTTCTCTAGGTGTCGTTGTGTGCGGTCCTCTTGTTTGGCTGTGCGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR CCA 90 bp TGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCCTACTACCGCTGCCTTaGGAGAATTTAGCGCACTGG +
Preference number: 2 (lower is better)
Translates to: WPSQGSALGMSPNSLTPTLLPLP*ENLAHW
Trigger: CCAGTGCGCTAAATTCTCCCAAGGCAGCGGTAGTAG...GGTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR CCA 90 bp AGCACAGCAAAGAAATACCTGGGAGATCAAGAGGAAACGGGAACACGCGCTGTGGCTGCTGTAGGGAGGTaGGGGGCTGTAGCGGGTATT +
Preference number: 2 (lower is better)
Translates to: STAKKYLGDQEETGTRAVAAVGR*GAVAGI
Trigger: AATACCCGCTACAGCCCCCCACCTCCCTACAGCAGC...CACAGCGCGTGTTCCCGTTTCCTCTTGATCTCCCAGGTATTTCTTTGCTGTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR CCA 90 bp ATGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACTACTCCGTGCGGAGCTaGACAGTGGACTGCATGGTA +
Preference number: 2 (lower is better)
Translates to: MAQPRLSTRHVTEFSNTHYSVRS*TVDCMV
Trigger: TACCATGCAGTCCACTGTCCAGCTCCGCACGGAGTA...GTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR CCA 90 bp AGCACAGCAAAGAAATACCTGGGAGATCAAGAGGAAACGGGAACACGCGCTGTGAACAGCAGCAGCCAGTaGCGGAGGCCGATGTACTGC +
Preference number: 2 (lower is better)
Translates to: STAKKYLGDQEETGTRAVNSSSQ*RRPMYC
Trigger: GCAGTACATCGGCCTCCGCCACTGGCTGCTGCTGTT...CACAGCGCGTGTTCCCGTTTCCTCTTGATCTCCCAGGTATTTCTTTGCTGTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR TCA 90 bp TGCCTGGATTCGGGATGGACCACAGTGGAGTGGGCGAAGACGGGGTTTTCTGTGCATGATGAACTGATGTaGGCTCCATACCCTGAGGTT +
Preference number: 2 (lower is better)
Translates to: CLDSGWTTVEWAKTGFSVHDELM*APYPEV
Trigger: AACCTCAGGGTATGGAGCTCACATCAGTTCATCATG...CACAGAAAACCCCGTCTTCGCCCACTCCACTGTGGTCCATCCCGAATCCAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR TCA 90 bp CACATCGGTGTGAGAAGCGCTGGTCTACAGCGATTCCACTTCACCATTCACTCTTGTCCTGTGTCACGGTaGCGGGCTGCACAGAGATCT +
Preference number: 2 (lower is better)
Translates to: HIGVRSAGLQRFHFTIHSCPVSR*RAAQRS
Trigger: AGATCTCTGTGCAGCCCGTCACCGTGACACAGGACA...AGAGTGAATGGTGAAGTGGAATCGCTGTAGACCAGCGCTTCTCACACCGATGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR TCA 90 bp CACATCGGTGTGAGAAGCGCTGGTCTACAGCGATTCCACTTCACCATTCACTCTTGGTGCCATAAAGGCTaGCCCCCAGCAAGCCCAGAA +
Preference number: 2 (lower is better)
Translates to: HIGVRSAGLQRFHFTIHSWCHKG*PPASPE
Trigger: TTCTGGGCTTGCTGGGGGTCAGCCTTTATGGCACCA...AGAGTGAATGGTGAAGTGGAATCGCTGTAGACCAGCGCTTCTCACACCGATGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR TCA 90 bp CACATCGGTGTGAGAAGCGCTGGTCTACAGCGATTCCACTTCACCATTCACTCTTGTCCCGCAAGCCGTTaGGGTAGAAAGGGAACTGGG +
Preference number: 2 (lower is better)
Translates to: HIGVRSAGLQRFHFTIHSCPASR*GRKGTG
Trigger: CCCAGTTCCCTTTCTACCTCAACGGCTTGCGGGACA...AGAGTGAATGGTGAAGTGGAATCGCTGTAGACCAGCGCTTCTCACACCGATGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR TCA 90 bp ACTCTGCATGGCTGGAGGGCACAGACTCCACGCAGGGATGCGTTTCTGGAACTAAAGCAACGTGAACGGTaGACTCCACTCCTATGCCAA +
Preference number: 2 (lower is better)
Translates to: TLHGWRAQTPRRDAFLELKQRER*TPLLCQ
Trigger: TTGGCATAGGAGTGGAGTTCACCGTTCACGTTGCTT...TAGTTCCAGAAACGCATCCCTGCGTGGAGTCTGTGCCCTCCAGCCATGCAGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR TCA 90 bp GGCCGCAGCACCATGGCAGAGGAGGAGAGTGCAGAAGTAGTTCTGCTTTCCCACTTCCTTTCTACAGTTTaGAGGAGAGGGAGCGTAGGT +
Preference number: 2 (lower is better)
Translates to: GRSTMAEEESAEVVLLSHFLSTV*RRGSVG
Trigger: ACCTACGCTCCCTCTCCTTCAAACTGTAGAAAGGAA...GTGGGAAAGCAGAACTACTTCTGCACTCTCCTCCTCTGCCATGGTGCTGCGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR GCA 90 bp GACACTGTCGTCTGGGAACTATACTCCGAGTCGGAGGAATCAGACCCGCTGTGCCTGCAAAGAAAATGCTaGCCATTCTGTGGGAGCTGG +
Preference number: 2 (lower is better)
Translates to: DTVVWELYSESEESDPLCLQRKC*PFCGSW
Trigger: CCAGCTCCCACAGAATGGGCAGCATTTTCTTTGCAG...GCACAGCGGGTCTGATTCCTCCGACTCGGAGTATAGTTCCCAGACGACAGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR GCA 90 bp AGCACAGCAAAGAAATACCTGGGAGATCAAGAGGAAACGGGAACACGCGCTGTGAAAGCACAAACACAATaGCGAGGGGCCCCGCTCGTG +
Preference number: 2 (lower is better)
Translates to: STAKKYLGDQEETGTRAVKAQTQ*RGAPLV
Trigger: CACGAGCGGGGCCCCTCGGCATTGTGTTTGTGCTTT...CACAGCGCGTGTTCCCGTTTCCTCTTGATCTCCCAGGTATTTCTTTGCTGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR CCA 90 bp ATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATTGGGGTCCTGGATGGCAGTGCTGGTGTGGATTTaGATGGGGAGCCGACACTGG +
Preference number: 2 (lower is better)
Translates to: IREKEIIPLKHKLGSWMAVLVWI*MGSRHW
Trigger: CCAGTGTCGGCTCCCCATCCAAATCCACACCAGCAC...TGCCATCCAGGACCCCAATTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR CCA 90 bp AGGATGGTGAGGATCGCCAGCACAGCAAAGAAATACCTGGGAGATCAAGAGGAAAGCGCGGCTCAGCGGTaGTGTAGTACACGTGCGTGT +
Preference number: 2 (lower is better)
Translates to: RMVRIASTAKKYLGDQEESAAQR*CSTRAC
Trigger: ACACGCACGTGTACTACACCACCGCTGAGCCGCGCT...TTCCTCTTGATCTCCCAGGTATTTCTTTGCTGTGCTGGCGATCCTCACCATCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR CCA 90 bp ATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATTGGGGTCCTGGATGGCAGTCGTGGACCCATTCTaGTCGGTGTGGCCGGATGTT +
Preference number: 2 (lower is better)
Translates to: IREKEIIPLKHKLGSWMAVVDPF*SVWPDV
Trigger: AACATCCGGCCACACCGACCAGAATGGGTCCACGAC...TGCCATCCAGGACCCCAATTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR CCA 90 bp CAGAGTTCTATCCAAGAGCAGGTCCCTCACAAAGCCATGGAGGCTGCTCAAAGAACTGGGCATACTCGATaGGCTCTGCTGCCGGGATTC +
Preference number: 2 (lower is better)
Translates to: QSSIQEQVPHKAMEAAQRTGHTR*ALLPGF
Trigger: GAATCCCGGCAGCAGAGCCCATCGAGTATGCCCAGT...TCTTTGAGCAGCCTCCATGGCTTTGTGAGGGACCTGCTCTTGGATAGAACTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR CCA 90 bp AGGATGGTGAGGATCGCCAGCACAGCAAAGAAATACCTGGGAGATCAAGAGGAAGGAAGGGGTAGCCGTTaGGGTAACTGGACAGCCCCA +
Preference number: 2 (lower is better)
Translates to: RMVRIASTAKKYLGDQEEGRGSR*GNWTAP
Trigger: TGGGGCTGTCCAGTTACCCCAACGGCTACCCCTTCC...TTCCTCTTGATCTCCCAGGTATTTCTTTGCTGTGCTGGCGATCCTCACCATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR TCA 90 bp GACACTGTCGTCTGGGAACTATACTCCGAGTCGGAGGAATCAGACCCGCTGTGCCAGTACAGTACATGGTaGACTCACACACGTGTTCAC +
Preference number: 2 (lower is better)
Translates to: DTVVWELYSESEESDPLCQYSTW*THTRVH
Trigger: GTGAACACGTGTGTGAGTTCACCATGTACTGTACTG...GCACAGCGGGTCTGATTCCTCCGACTCGGAGTATAGTTCCCAGACGACAGTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR TCA 90 bp TGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCCAGTACAGTACATGGTaGACTCACACACGTGTTCAC +
Preference number: 2 (lower is better)
Translates to: WPSQGSALGMSPNSLTPTQYSTW*THTRVH
Trigger: GTGAACACGTGTGTGAGTTCACCATGTACTGTACTG...GGTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR TCA 90 bp ACACGCACAGCCAAACAAGAGGACCGCACACAACGACACCTAGAGAAGCCACCAAGGAGATTATCCCCCTaGAGCACAAATTGGGGTCCT +
Preference number: 2 (lower is better)
Translates to: TRTAKQEDRTQRHLEKPPRRLSP*STNWGP
Trigger: AGGACCCCAATTTGTGCTTCAGGGGGATAATCTCCT...TGGTGGCTTCTCTAGGTGTCGTTGTGTGCGGTCCTCTTGTTTGGCTGTGCGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR GCA 90 bp TGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCGGAGAGTCTAGCTTTTaGCGGGCTGATTTGAAAGGA +
Preference number: 2 (lower is better)
Translates to: WPSQGSALGMSPNSLTPTGESSF*RADLKG
Trigger: TCCTTTCAAATCAGCCCGGCAAAAGCTAGACTCTCC...GGTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR GCA 90 bp ATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAGTCTAGCTTTTGGGGGTCGTACTCCGTaGGGAGCTGGACAGTGGACT +
Preference number: 2 (lower is better)
Translates to: MAANDHKRCRRHEESLAFGGRTP*GAGQWT
Trigger: AGTCCACTGTCCAGCTCCGCACGGAGTACGACCCCC...AAAAGCTAGACTCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR GCA 90 bp TGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCCCAGGCTCGTATAGTTaGTGCAGATGGTCCTTACTT +
Preference number: 2 (lower is better)
Translates to: WPSQGSALGMSPNSLTPTPGSYS*CRWSLL
Trigger: AAGTAAGGACCATCTGCAGCAACTATACGAGCCTGG...GGTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR GCA 90 bp ACTCTGCATGGCTGGAGGGCACAGACTCCACGCAGGGATGCGTTTCTGGAACTAGTCACGATGACGAGGTaGTGCAATCTACCAGATACA +
Preference number: 2 (lower is better)
Translates to: TLHGWRAQTPRRDAFLELVTMTR*CNLPDT
Trigger: TGTATCTGGTAGATTGCAGCACCTCGTCATCGTGAC...TAGTTCCAGAAACGCATCCCTGCGTGGAGTCTGTGCCCTCCAGCCATGCAGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR GCA 90 bp ACACGCACAGCCAAACAAGAGGACCGCACACAACGACACCTAGAGAAGCCACCACAATTCGCTGTGGCATaGACCTCCATAAAGACTGGC +
Preference number: 2 (lower is better)
Translates to: TRTAKQEDRTQRHLEKPPQFAVA*TSIKTG
Trigger: GCCAGTCTTTATGGAGGTGCATGCCACAGCGAATTG...TGGTGGCTTCTCTAGGTGTCGTTGTGTGCGGTCCTCTTGTTTGGCTGTGCGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430669.6
3UTR-3UTR CCA 90 bp ATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATTGGGGTCCTGGATGGCAGGAAAGAGGTGGGGGTaGGGGGTTTCCAATCTTTGG +
Preference number: 2 (lower is better)
Translates to: IREKEIIPLKHKLGSWMAGKRWG*GVSNLW
Trigger: CCAAAGATTGGAAACCCCCCACCCCCACCTCTTTCC...TGCCATCCAGGACCCCAATTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR CCA 90 bp CACATCGGTGTGAGAAGCGCTGGTCTACAGCGATTCCACTTCACCATTCACTCTGGAAAGAGGTGGGGGTaGGGGGTTTCCAATCTTTGG +
Preference number: 2 (lower is better)
Translates to: HIGVRSAGLQRFHFTIHSGKRWG*GVSNLW
Trigger: CCAAAGATTGGAAACCCCCCACCCCCACCTCTTTCC...AGAGTGAATGGTGAAGTGGAATCGCTGTAGACCAGCGCTTCTCACACCGATGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR CCA 90 bp TGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCAATGAACTGCTGTCCTaGCACAGGGCATCTTTTCCA +
Preference number: 2 (lower is better)
Translates to: WPSQGSALGMSPNSLTPTNELLS*HRASFP
Trigger: TGGAAAAGATGCCCTGTGCCAGGACAGCAGTTCATT...GGTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR CCA 90 bp TGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCCACAAATTGGGGTCCTaGATGGCAGCCAATGATCAT +
Preference number: 2 (lower is better)
Translates to: WPSQGSALGMSPNSLTPTHKLGS*MAANDH
Trigger: ATGATCATTGGCTGCCATCCAGGACCCCAATTTGTG...GGTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR CCA 90 bp CACATCGGTGTGAGAAGCGCTGGTCTACAGCGATTCCACTTCACCATTCACTCTGGATGGCAGACCATGTaGGTGACAGGCACCAAGACA +
Preference number: 2 (lower is better)
Translates to: HIGVRSAGLQRFHFTIHSGWQTM*VTGTKT
Trigger: TGTCTTGGTGCCTGTCACCCACATGGTCTGCCATCC...AGAGTGAATGGTGAAGTGGAATCGCTGTAGACCAGCGCTTCTCACACCGATGTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR CCA 90 bp CCAGGCTCGTATAGTTGCTGCAGATGGTCCTTACTTTTTCAATTGCCTCCACAAGGTGTGGCCGGATGTTaGCCTGGGAGGCAGCATACG +
Preference number: 2 (lower is better)
Translates to: PGSYSCCRWSLLFQLPPQGVAGC*PGRQHT
Trigger: CGTATGCTGCCTCCCAGGCCAACATCCGGCCACACC...TTGTGGAGGCAATTGAAAAAGTAAGGACCATCTGCAGCAACTATACGAGCCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR CCA 90 bp TCCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAACCATTCTGGTCGGTGTaGCCGGATGTTGGCCTGGGA +
Preference number: 2 (lower is better)
Translates to: SSIHHNDPREGDYPPEAQPFWSV*PDVGLG
Trigger: TCCCAGGCCAACATCCGGCCACACCGACCAGAATGG...TTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR CCA 90 bp CACATCGGTGTGAGAAGCGCTGGTCTACAGCGATTCCACTTCACCATTCACTCTTGCCAAATTGCCCAGTaGGCTATGCCACAGGCCAAC +
Preference number: 2 (lower is better)
Translates to: HIGVRSAGLQRFHFTIHSCQIAQ*AMPQAN
Trigger: GTTGGCCTGTGGCATAGCCCACTGGGCAATTTGGCA...AGAGTGAATGGTGAAGTGGAATCGCTGTAGACCAGCGCTTCTCACACCGATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR CCA 90 bp GGCCGCAGCACCATGGCAGAGGAGGAGAGTGCAGAAGTAGTTCTGCTTTCCCACTTGCTGTTGTGCAAATaGCACTTATGGGGTGCTTGT +
Preference number: 2 (lower is better)
Translates to: GRSTMAEEESAEVVLLSHLLLCK*HLWGAC
Trigger: ACAAGCACCCCATAAGTGCCATTTGCACAACAGCAA...GTGGGAAAGCAGAACTACTTCTGCACTCTCCTCCTCTGCCATGGTGCTGCGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR TCA 90 bp ATGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCAGTACAGTACATGGTaGACTCACACACGTGTTCAC +
Preference number: 2 (lower is better)
Translates to: MAQPRLSTRHVTEFSNTHQYSTW*THTRVH
Trigger: GTGAACACGTGTGTGAGTTCACCATGTACTGTACTG...GTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR TCA 90 bp ACACGCACAGCCAAACAAGAGGACCGCACACAACGACACCTAGAGAAGCCACCACAGTACAGTACATGGTaGACTCACACACGTGTTCAC +
Preference number: 2 (lower is better)
Translates to: TRTAKQEDRTQRHLEKPPQYSTW*THTRVH
Trigger: GTGAACACGTGTGTGAGTTCACCATGTACTGTACTG...TGGTGGCTTCTCTAGGTGTCGTTGTGTGCGGTCCTCTTGTTTGGCTGTGCGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR TCA 90 bp GACACTGTCGTCTGGGAACTATACTCCGAGTCGGAGGAATCAGACCCGCTGTGCCAGCATCCATCACAATaGTCCGAGAGAAGGAGATTA +
Preference number: 2 (lower is better)
Translates to: DTVVWELYSESEESDPLCQHPSQ*SERRRL
Trigger: TAATCTCCTTCTCTCGGATCATTGTGATGGATGCTG...GCACAGCGGGTCTGATTCCTCCGACTCGGAGTATAGTTCCCAGACGACAGTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR TCA 90 bp TGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCCAGCATCCATCACAATaGTCCGAGAGAAGGAGATTA +
Preference number: 2 (lower is better)
Translates to: WPSQGSALGMSPNSLTPTQHPSQ*SERRRL
Trigger: TAATCTCCTTCTCTCGGATCATTGTGATGGATGCTG...GGTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR TCA 90 bp ATGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCATGATGAACTGATGTaGGCTCCATACCCTGAGGTT +
Preference number: 2 (lower is better)
Translates to: MAQPRLSTRHVTEFSNTHHDELM*APYPEV
Trigger: AACCTCAGGGTATGGAGCTCACATCAGTTCATCATG...GTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR TCA 90 bp ATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATTGGGGTCCTGGATGGCACCCACCATGATGAACTaGTGTGAGCTCCATACCCTG +
Preference number: 2 (lower is better)
Translates to: IREKEIIPLKHKLGSWMAPTMMN*CELHTL
Trigger: CAGGGTATGGAGCTCACATCAGTTCATCATGGTGGG...TGCCATCCAGGACCCCAATTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR TCA 90 bp TCCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAGGCCACATCCACTCTTaGATTTGGGGGTGTTGGGGG +
Preference number: 2 (lower is better)
Translates to: SSIHHNDPREGDYPPEAQGHIHS*IWGCWG
Trigger: CCCCCAACACCCCCAAATTCAAGAGTGGATGTGGCC...TTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR TCA 90 bp AGGATGGTGAGGATCGCCAGCACAGCAAAGAAATACCTGGGAGATCAAGAGGAATCTCTGGTTACGAGATaGGGGAGCCCACACCTCAGA +
Preference number: 2 (lower is better)
Translates to: RMVRIASTAKKYLGDQEESLVTR*GSPHLR
Trigger: TCTGAGGTGTGGGCTCCCTCATCTCGTAACCAGAGA...TTCCTCTTGATCTCCCAGGTATTTCTTTGCTGTGCTGGCGATCCTCACCATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR GCA 90 bp ATGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACACAGTAACAATGAACTaGTGTCCTGGCACAGGGCAT +
Preference number: 2 (lower is better)
Translates to: MAQPRLSTRHVTEFSNTHTVTMN*CPGTGH
Trigger: ATGCCCTGTGCCAGGACAGCAGTTCATTGTTACTGT...GTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR GCA 90 bp ACACGCACAGCCAAACAAGAGGACCGCACACAACGACACCTAGAGAAGCCACCAACAGTAACAATGAACTaGTGTCCTGGCACAGGGCAT +
Preference number: 2 (lower is better)
Translates to: TRTAKQEDRTQRHLEKPPTVTMN*CPGTGH
Trigger: ATGCCCTGTGCCAGGACAGCAGTTCATTGTTACTGT...TGGTGGCTTCTCTAGGTGTCGTTGTGTGCGGTCCTCTTGTTTGGCTGTGCGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR GCA 90 bp CCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATGGCACGGAGCCCAATaGACAAATACGGAGAGGCCC +
Preference number: 2 (lower is better)
Translates to: PASITMIREKEIIPLKHKWHGAQ*TNTERP
Trigger: GGGCCTCTCCGTATTTGTGCATTGGGCTCCGTGCCA...TTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR GCA 90 bp TCCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAATGGCACGGAGCCCAATaGACAAATACGGAGAGGCCC +
Preference number: 2 (lower is better)
Translates to: SSIHHNDPREGDYPPEAQWHGAQ*TNTERP
Trigger: GGGCCTCTCCGTATTTGTGCATTGGGCTCCGTGCCA...TTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR GCA 90 bp ATGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACGGAGAGTCTAGCTTTTaGCGGGCTGATTTGAAAGGA +
Preference number: 2 (lower is better)
Translates to: MAQPRLSTRHVTEFSNTHGESSF*RADLKG
Trigger: TCCTTTCAAATCAGCCCGGCAAAAGCTAGACTCTCC...GTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR GCA 90 bp ACTCTGCATGGCTGGAGGGCACAGACTCCACGCAGGGATGCGTTTCTGGAACTAGGGCACCATGCTGCATaGTTTTTAGAGTATACAGAC +
Preference number: 2 (lower is better)
Translates to: TLHGWRAQTPRRDAFLELGHHAA*FLEYTD
Trigger: GTCTGTATACTCTAAAAAGCATGCAGCATGGTGCCC...TAGTTCCAGAAACGCATCCCTGCGTGGAGTCTGTGCCCTCCAGCCATGCAGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR GCA 90 bp AAGAGCACTAATGACGGGGAGGATGGAGACAATGTTTGGATTTACTTAGGAAGCGTCACGGTGACGGGCTaGACAGAGATCTCGGAGCGC +
Preference number: 2 (lower is better)
Translates to: KSTNDGEDGDNVWIYLGSVTVTG*TEISER
Trigger: GCGCTCCGAGATCTCTGTGCAGCCCGTCACCGTGAC...GCTTCCTAAGTAAATCCAAACATTGTCTCCATCCTCCCCGTCATTAGTGCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR GCA 90 bp GACACTGTCGTCTGGGAACTATACTCCGAGTCGGAGGAATCAGACCCGCTGTGCTTTCTGCAAAGAAAATaGTGCCCATTCTGTGGGAGC +
Preference number: 2 (lower is better)
Translates to: DTVVWELYSESEESDPLCFLQRK*CPFCGS
Trigger: GCTCCCACAGAATGGGCAGCATTTTCTTTGCAGAAA...GCACAGCGGGTCTGATTCCTCCGACTCGGAGTATAGTTCCCAGACGACAGTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR CCA 90 bp ATGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACAATGAACTGCTGTCCTaGCACAGGGCATCTTTTCCA +
Preference number: 2 (lower is better)
Translates to: MAQPRLSTRHVTEFSNTHNELLS*HRASFP
Trigger: TGGAAAAGATGCCCTGTGCCAGGACAGCAGTTCATT...GTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR CCA 90 bp ACACGCACAGCCAAACAAGAGGACCGCACACAACGACACCTAGAGAAGCCACCAAATGAACTGCTGTCCTaGCACAGGGCATCTTTTCCA +
Preference number: 2 (lower is better)
Translates to: TRTAKQEDRTQRHLEKPPNELLS*HRASFP
Trigger: TGGAAAAGATGCCCTGTGCCAGGACAGCAGTTCATT...TGGTGGCTTCTCTAGGTGTCGTTGTGTGCGGTCCTCTTGTTTGGCTGTGCGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR CCA 90 bp ATGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACAAGACTAATGAAGCTTaGTTGTGGCACGGAGCCCAA +
Preference number: 2 (lower is better)
Translates to: MAQPRLSTRHVTEFSNTHKTNEA*LWHGAQ
Trigger: TTGGGCTCCGTGCCACAACCAAGCTTCATTAGTCTT...GTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR CCA 90 bp ACACGCACAGCCAAACAAGAGGACCGCACACAACGACACCTAGAGAAGCCACCAAAGACTAATGAAGCTTaGTTGTGGCACGGAGCCCAA +
Preference number: 2 (lower is better)
Translates to: TRTAKQEDRTQRHLEKPPKTNEA*LWHGAQ
Trigger: TTGGGCTCCGTGCCACAACCAAGCTTCATTAGTCTT...TGGTGGCTTCTCTAGGTGTCGTTGTGTGCGGTCCTCTTGTTTGGCTGTGCGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR CCA 90 bp TGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCAATTGGGGTCCTGGATaGCAGCCAATGATCATAAGA +
Preference number: 2 (lower is better)
Translates to: WPSQGSALGMSPNSLTPTNWGPG*QPMIIR
Trigger: TCTTATGATCATTGGCTGCCATCCAGGACCCCAATT...GGTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR CCA 90 bp GACACTGTCGTCTGGGAACTATACTCCGAGTCGGAGGAATCAGACCCGCTGTGCAATTGGGGTCCTGGATaGCAGCCAATGATCATAAGA +
Preference number: 2 (lower is better)
Translates to: DTVVWELYSESEESDPLCNWGPG*QPMIIR
Trigger: TCTTATGATCATTGGCTGCCATCCAGGACCCCAATT...GCACAGCGGGTCTGATTCCTCCGACTCGGAGTATAGTTCCCAGACGACAGTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR CCA 90 bp ACACGCACAGCCAAACAAGAGGACCGCACACAACGACACCTAGAGAAGCCACCACACAAATTGGGGTCCTaGATGGCAGCCAATGATCAT +
Preference number: 2 (lower is better)
Translates to: TRTAKQEDRTQRHLEKPPHKLGS*MAANDH
Trigger: ATGATCATTGGCTGCCATCCAGGACCCCAATTTGTG...TGGTGGCTTCTCTAGGTGTCGTTGTGTGCGGTCCTCTTGTTTGGCTGTGCGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR CCA 90 bp ATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATTGGGGTCCTGGATGGCAAACAAGGTGCTGGTGTaGATTTGGATGGGGAGCCGA +
Preference number: 2 (lower is better)
Translates to: IREKEIIPLKHKLGSWMANKVLV*IWMGSR
Trigger: TCGGCTCCCCATCCAAATCCACACCAGCACCTTGTT...TGCCATCCAGGACCCCAATTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR CCA 90 bp GGCCGCAGCACCATGGCAGAGGAGGAGAGTGCAGAAGTAGTTCTGCTTTCCCACAAGCAGCCAATGTCTTaGTCTAATGTAAACTGCTGG +
Preference number: 2 (lower is better)
Translates to: GRSTMAEEESAEVVLLSHKQPMS*SNVNCW
Trigger: CCAGCAGTTTACATTAGACCAAGACATTGGCTGCTT...GTGGGAAAGCAGAACTACTTCTGCACTCTCCTCCTCTGCCATGGTGCTGCGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR CCA 90 bp TCCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAGGGAAGAGAGCAGTGTaGAGCTGGACTGGTTCCCCA +
Preference number: 2 (lower is better)
Translates to: SSIHHNDPREGDYPPEAQGKRAV*SWTGSP
Trigger: TGGGGAACCAGTCCAGCTCCACACTGCTCTCTTCCC...TTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430669.6
3UTR-3UTR CCA 90 bp ATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAGTCTAGCTTTTCTGTTTGTGTCCTTGTaGCGCTGCACCGACCCTCCG +
Preference number: 2 (lower is better)
Translates to: MAANDHKRCRRHEESLAFLFVSL*RCTDPP
Trigger: CGGAGGGTCGGTGCAGCGCCACAAGGACACAAACAG...AAAAGCTAGACTCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430669.6
3UTR-3UTR TCA 90 bp ATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATTGGGGTCCTGGATGGCAAGGAGATTATCCCCCTaGAGCACAAATTGGGGTCCT +
Preference number: 2 (lower is better)
Translates to: IREKEIIPLKHKLGSWMARRLSP*STNWGP
Trigger: AGGACCCCAATTTGTGCTTCAGGGGGATAATCTCCT...TGCCATCCAGGACCCCAATTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR TCA 90 bp ATGATGCCATCTGCATCCACCAGACGCTGTTTAGTCAACTGGCTGATGTCGATGCCCACCATGATGAACTaGTGTGAGCTCCATACCCTG +
Preference number: 2 (lower is better)
Translates to: MMPSASTRRCLVNWLMSMPTMMN*CELHTL
Trigger: CAGGGTATGGAGCTCACATCAGTTCATCATGGTGGG...CATCGACATCAGCCAGTTGACTAAACAGCGTCTGGTGGATGCAGATGGCATCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR TCA 90 bp ACACGCACAGCCAAACAAGAGGACCGCACACAACGACACCTAGAGAAGCCACCACTTCTCAGCAAAAGATaGGAGTGTCCACTTCGTACA +
Preference number: 2 (lower is better)
Translates to: TRTAKQEDRTQRHLEKPPLLSKR*ECPLRT
Trigger: TGTACGAAGTGGACACTCTCATCTTTTGCTGAGAAG...TGGTGGCTTCTCTAGGTGTCGTTGTGTGCGGTCCTCTTGTTTGGCTGTGCGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR TCA 90 bp ATGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCATACTTCACGTTACTaGAACTCCTGTGTAGGTCGT +
Preference number: 2 (lower is better)
Translates to: MAQPRLSTRHVTEFSNTHHTSRY*NSCVGR
Trigger: ACGACCTACACAGGAGTTTCAGTAACGTGAAGTATG...GTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR TCA 90 bp GACACTGTCGTCTGGGAACTATACTCCGAGTCGGAGGAATCAGACCCGCTGTGCTGTAATTGTTTGGCATaGTTTTCCCGGTTTCCCAGT +
Preference number: 2 (lower is better)
Translates to: DTVVWELYSESEESDPLCCNCLA*FSRFPS
Trigger: ACTGGGAAACCGGGAAAATCATGCCAAACAATTACA...GCACAGCGGGTCTGATTCCTCCGACTCGGAGTATAGTTCCCAGACGACAGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR TCA 90 bp GGCCGCAGCACCATGGCAGAGGAGGAGAGTGCAGAAGTAGTTCTGCTTTCCCACCTCGAATATGAAATCTaGGCACGTCATTTTCACTTC +
Preference number: 2 (lower is better)
Translates to: GRSTMAEEESAEVVLLSHLEYEI*ARHFHF
Trigger: GAAGTGAAAATGACGTGCTCAGATTTCATATTCGAG...GTGGGAAAGCAGAACTACTTCTGCACTCTCCTCCTCTGCCATGGTGCTGCGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR GCA 90 bp TGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCCCACCAGGATTAACGTaGTTTCTTCATATCTGCTCA +
Preference number: 2 (lower is better)
Translates to: WPSQGSALGMSPNSLTPTPPGLT*FLHICS
Trigger: TGAGCAGATATGAAGAAAGCACGTTAATCCTGGTGG...GGTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR GCA 90 bp TGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCAATGATCATAAGAGATaGCGTAGACACGAGGAGAGT +
Preference number: 2 (lower is better)
Translates to: WPSQGSALGMSPNSLTPTNDHKR*RRHEES
Trigger: ACTCTCCTCGTGTCTACGGCATCTCTTATGATCATT...GGTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR GCA 90 bp ACACGCACAGCCAAACAAGAGGACCGCACACAACGACACCTAGAGAAGCCACCAGGGCACCATGCTGCATaGTTTTTAGAGTATACAGAC +
Preference number: 2 (lower is better)
Translates to: TRTAKQEDRTQRHLEKPPGHHAA*FLEYTD
Trigger: GTCTGTATACTCTAAAAAGCATGCAGCATGGTGCCC...TGGTGGCTTCTCTAGGTGTCGTTGTGTGCGGTCCTCTTGTTTGGCTGTGCGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR GCA 90 bp AGCACAGCAAAGAAATACCTGGGAGATCAAGAGGAAACGGGAACACGCGCTGTGTCGACTTCAGAATTCTaGATCATCCCTCCTCCACGC +
Preference number: 2 (lower is better)
Translates to: STAKKYLGDQEETGTRAVSTSEF*IIPPPR
Trigger: GCGTGGAGGAGGGATGATGCAGAATTCTGAAGTCGA...CACAGCGCGTGTTCCCGTTTCCTCTTGATCTCCCAGGTATTTCTTTGCTGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR GCA 90 bp AGCACAGCAAAGAAATACCTGGGAGATCAAGAGGAAACGGGAACACGCGCTGTGCTCCTTGCACACGCCTaGTTACCTGACAATGAAGTC +
Preference number: 2 (lower is better)
Translates to: STAKKYLGDQEETGTRAVLLAHA*LPDNEV
Trigger: GACTTCATTGTCAGGTAAGCAGGCGTGTGCAAGGAG...CACAGCGCGTGTTCCCGTTTCCTCTTGATCTCCCAGGTATTTCTTTGCTGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR GCA 90 bp CGCCACCCTCCGTGTGCCCGACACAGCAGCATGGCAACGCCAGAAATGAACAAACATTATTTGCTGTTGTaGAAATGGCACTTATGGGGT +
Preference number: 2 (lower is better)
Translates to: RHPPCARHSSMATPEMNKHYLLL*KWHLWG
Trigger: ACCCCATAAGTGCCATTTGCACAACAGCAAATAATG...TTTGTTCATTTCTGGCGTTGCCATGCTGCTGTGTCGGGCACACGGAGGGTGGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR GCA 90 bp TCCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAATCTAGGTCCCTTGGCTaGCCTTGTCAGTGGCACTCA +
Preference number: 2 (lower is better)
Translates to: SSIHHNDPREGDYPPEAQSRSLG*PCQWHS
Trigger: TGAGTGCCACTGACAAGGGCAGCCAAGGGACCTAGA...TTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430669.6
3UTR-3UTR CCA 90 bp CCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAAGGAAAGAGGTGGGGGTaGGGGGTTTCCAATCTTTGG +
Preference number: 2 (lower is better)
Translates to: PASITMIREKEIIPLKHKGKRWG*GVSNLW
Trigger: CCAAAGATTGGAAACCCCCCACCCCCACCTCTTTCC...TTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR CCA 90 bp TGGGGTCCTGGATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAAATGAACTGCTGTCCTaGCACAGGGCATCTTTTCCA +
Preference number: 2 (lower is better)
Translates to: WGPGWQPMIIRDAVDTRRNELLS*HRASFP
Trigger: TGGAAAAGATGCCCTGTGCCAGGACAGCAGTTCATT...TCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCATCCAGGACCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR CCA 90 bp ACACGCACAGCCAAACAAGAGGACCGCACACAACGACACCTAGAGAAGCCACCAAATTGGGGTCCTGGATaGCAGCCAATGATCATAAGA +
Preference number: 2 (lower is better)
Translates to: TRTAKQEDRTQRHLEKPPNWGPG*QPMIIR
Trigger: TCTTATGATCATTGGCTGCCATCCAGGACCCCAATT...TGGTGGCTTCTCTAGGTGTCGTTGTGTGCGGTCCTCTTGTTTGGCTGTGCGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR CCA 90 bp TGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCTCAAAACATCATTTCTaGGAGACTGTGGGCCAAGAA +
Preference number: 2 (lower is better)
Translates to: WPSQGSALGMSPNSLTPTSKHHF*ETVGQE
Trigger: TTCTTGGCCCACAGTCTCCCAGAAATGATGTTTTGA...GGTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR CCA 90 bp GGCCGCAGCACCATGGCAGAGGAGGAGAGTGCAGAAGTAGTTCTGCTTTCCCACAGTGCAGCCACATTTTaGGAAGCTGTTTGTTTTCTT +
Preference number: 2 (lower is better)
Translates to: GRSTMAEEESAEVVLLSHSAATF*EAVCFL
Trigger: AAGAAAACAAACAGCTTCCCAAAATGTGGCTGCACT...GTGGGAAAGCAGAACTACTTCTGCACTCTCCTCCTCTGCCATGGTGCTGCGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR CCA 90 bp GACACTGTCGTCTGGGAACTATACTCCGAGTCGGAGGAATCAGACCCGCTGTGCGGGCAACTCTCTACTTaGTATTGGCAAACAGGAATT +
Preference number: 2 (lower is better)
Translates to: DTVVWELYSESEESDPLCGQLST*YWQTGI
Trigger: AATTCCTGTTTGCCAATACCAAGTAGAGAGTTGCCC...GCACAGCGGGTCTGATTCCTCCGACTCGGAGTATAGTTCCCAGACGACAGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR CCA 90 bp AGGATGGTGAGGATCGCCAGCACAGCAAAGAAATACCTGGGAGATCAAGAGGAAGGAATGCGACCTGAATaGCTGGGCAGACTGAAAGCA +
Preference number: 2 (lower is better)
Translates to: RMVRIASTAKKYLGDQEEGMRPE*LGRLKA
Trigger: TGCTTTCAGTCTGCCCAGCCATTCAGGTCGCATTCC...TTCCTCTTGATCTCCCAGGTATTTCTTTGCTGTGCTGGCGATCCTCACCATCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR CCA 90 bp ATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATTGGGGTCCTGGATGGCAAGACGGGGTTTTCTGTaGCTTCCACGATCACTTGGT +
Preference number: 2 (lower is better)
Translates to: IREKEIIPLKHKLGSWMARRGFL*LPRSLG
Trigger: ACCAAGTGATCGTGGAAGCCACAGAAAACCCCGTCT...TGCCATCCAGGACCCCAATTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR CAA 90 bp TATGGTCCAAAGAAAGACAAAAGCACGGGAAGCAAAACCAGCCCATaGAGAACGCCGAGGATGGTGAGGATCGCCAGCACAGCAAAGAAA +
Preference number: 2 (lower is better)
Translates to: YGPKKDKSTGSKTSP*RTPRMVRIASTAKK
Trigger: TTTCTTTGCTGTGCTGGCGATCCTCACCATCCTCGGCGTTCTCAATGGGCTGGTTTTGCTTCCCGTGCTTTTGTCTTTCTTTGGACCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR TCA 90 bp AAGAGCACTAATGACGGGGAGGATGGAGACAATGTTTGGATTTACTTAGGAAGCGGCCACATCCACTCTTaGATTTGGGGGTGTTGGGGG +
Preference number: 2 (lower is better)
Translates to: KSTNDGEDGDNVWIYLGSGHIHS*IWGCWG
Trigger: CCCCCAACACCCCCAAATTCAAGAGTGGATGTGGCC...GCTTCCTAAGTAAATCCAAACATTGTCTCCATCCTCCCCGTCATTAGTGCTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR GCA 90 bp ATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATTGGGGTCCTGGATGGCAACAGTAACAATGAACTaGTGTCCTGGCACAGGGCAT +
Preference number: 2 (lower is better)
Translates to: IREKEIIPLKHKLGSWMATVTMN*CPGTGH
Trigger: ATGCCCTGTGCCAGGACAGCAGTTCATTGTTACTGT...TGCCATCCAGGACCCCAATTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR GCA 90 bp ACACGCACAGCCAAACAAGAGGACCGCACACAACGACACCTAGAGAAGCCACCACCACCAGGATTAACGTaGTTTCTTCATATCTGCTCA +
Preference number: 2 (lower is better)
Translates to: TRTAKQEDRTQRHLEKPPPPGLT*FLHICS
Trigger: TGAGCAGATATGAAGAAAGCACGTTAATCCTGGTGG...TGGTGGCTTCTCTAGGTGTCGTTGTGTGCGGTCCTCTTGTTTGGCTGTGCGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR GCA 90 bp ATGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACAATGATCATAAGAGATaGCGTAGACACGAGGAGAGT +
Preference number: 2 (lower is better)
Translates to: MAQPRLSTRHVTEFSNTHNDHKR*RRHEES
Trigger: ACTCTCCTCGTGTCTACGGCATCTCTTATGATCATT...GTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR GCA 90 bp ACACGCACAGCCAAACAAGAGGACCGCACACAACGACACCTAGAGAAGCCACCAAATGATCATAAGAGATaGCGTAGACACGAGGAGAGT +
Preference number: 2 (lower is better)
Translates to: TRTAKQEDRTQRHLEKPPNDHKR*RRHEES
Trigger: ACTCTCCTCGTGTCTACGGCATCTCTTATGATCATT...TGGTGGCTTCTCTAGGTGTCGTTGTGTGCGGTCCTCTTGTTTGGCTGTGCGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR CCA 90 bp ATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAGTCTAGCTTTTGGAAAGAGGTGGGGGTaGGGGGTTTCCAATCTTTGG +
Preference number: 2 (lower is better)
Translates to: MAANDHKRCRRHEESLAFGKRWG*GVSNLW
Trigger: CCAAAGATTGGAAACCCCCCACCCCCACCTCTTTCC...AAAAGCTAGACTCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR CCA 90 bp ATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATTGGGGTCCTGGATGGCACACAAATTGGGGTCCTaGATGGCAGCCAATGATCAT +
Preference number: 2 (lower is better)
Translates to: IREKEIIPLKHKLGSWMAHKLGS*MAANDH
Trigger: ATGATCATTGGCTGCCATCCAGGACCCCAATTTGTG...TGCCATCCAGGACCCCAATTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR CCA 90 bp TGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCATTTCTGGGAGACTGTaGGCCAAGAAAGAATTAACT +
Preference number: 2 (lower is better)
Translates to: WPSQGSALGMSPNSLTPTISGRL*AKKELT
Trigger: AGTTAATTCTTTCTTGGCCCACAGTCTCCCAGAAAT...GGTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR CCA 90 bp ATGATGCCATCTGCATCCACCAGACGCTGTTTAGTCAACTGGCTGATGTCGATGGTAATCTGCGTTTCATaGGCAAAGCTGTGGCTGCTG +
Preference number: 2 (lower is better)
Translates to: MMPSASTRRCLVNWLMSMVICVS*AKLWLL
Trigger: CAGCAGCCACAGCTTTGCCCATGAAACGCAGATTAC...CATCGACATCAGCCAGTTGACTAAACAGCGTCTGGTGGATGCAGATGGCATCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR TCA 90 bp ATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATTGGGGTCCTGGATGGCACAGCATCCATCACAATaGTCCGAGAGAAGGAGATTA +
Preference number: 2 (lower is better)
Translates to: IREKEIIPLKHKLGSWMAQHPSQ*SERRRL
Trigger: TAATCTCCTTCTCTCGGATCATTGTGATGGATGCTG...TGCCATCCAGGACCCCAATTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR TCA 90 bp ACAGCGATTCCACTTCACCATTCACTCTATGCAAAAACTACAATAAGCAAGCTTCCAGGACCATCACAATaGTCCCGGCCGTCCAGGGGT +
Preference number: 2 (lower is better)
Translates to: TAIPLHHSLYAKTTISKLPGPSQ*SRPSRG
Trigger: ACCCCTGGACGGCCGGGATCATTGTGATGGTCCTGG...AAGCTTGCTTATTGTAGTTTTTGCATAGAGTGAATGGTGAAGTGGAATCGCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR TCA 90 bp AGCACAGCAAAGAAATACCTGGGAGATCAAGAGGAAACGGGAACACGCGCTGTGTCCCATCCATCTAGCTaGAGCATAAACAGGCCAATT +
Preference number: 2 (lower is better)
Translates to: STAKKYLGDQEETGTRAVSHPSS*SINRPI
Trigger: AATTGGCCTGTTTATGCTTCAGCTAGATGGATGGGA...CACAGCGCGTGTTCCCGTTTCCTCTTGATCTCCCAGGTATTTCTTTGCTGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR TCA 90 bp TGGAGTGCCGAGTCCAGGTGTTGTAGGAGCGCTTCTGTGGTCAGGACATTAGCAGTCTGTATCATGAGTTaGGGATTAAACATAGCCTCT +
Preference number: 2 (lower is better)
Translates to: WSAESRCCRSASVVRTLAVCIMS*GLNIAS
Trigger: AGAGGCTATGTTTAATCCTCAACTCATGATACAGAC...TGCTAATGTCCTGACCACAGAAGCGCTCCTACAACACCTGGACTCGGCACTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551623.1
3UTR-3UTR GCA 90 bp TGGGGTCCTGGATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGACCACCAGGATTAACGTaGTTTCTTCATATCTGCTCA +
Preference number: 2 (lower is better)
Translates to: WGPGWQPMIIRDAVDTRRPPGLT*FLHICS
Trigger: TGAGCAGATATGAAGAAAGCACGTTAATCCTGGTGG...TCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCATCCAGGACCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR GCA 90 bp ATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATTGGGGTCCTGGATGGCAGGGCACCATGCTGCATaGTTTTTAGAGTATACAGAC +
Preference number: 2 (lower is better)
Translates to: IREKEIIPLKHKLGSWMAGHHAA*FLEYTD
Trigger: GTCTGTATACTCTAAAAAGCATGCAGCATGGTGCCC...TGCCATCCAGGACCCCAATTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR GCA 90 bp AGGATGGTGAGGATCGCCAGCACAGCAAAGAAATACCTGGGAGATCAAGAGGAAGACTGCATGGTAATCTaGGTTTCATGGGCAAAGCTG +
Preference number: 2 (lower is better)
Translates to: RMVRIASTAKKYLGDQEEDCMVI*VSWAKL
Trigger: CAGCTTTGCCCATGAAACGCAGATTACCATGCAGTC...TTCCTCTTGATCTCCCAGGTATTTCTTTGCTGTGCTGGCGATCCTCACCATCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR GCA 90 bp ATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATTGGGGTCCTGGATGGCAACGATGACGAGGTGCTaGAATCTACCAGATACAGAA +
Preference number: 2 (lower is better)
Translates to: IREKEIIPLKHKLGSWMATMTRC*NLPDTE
Trigger: TTCTGTATCTGGTAGATTGCAGCACCTCGTCATCGT...TGCCATCCAGGACCCCAATTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR GCA 90 bp AGGATGGTGAGGATCGCCAGCACAGCAAAGAAATACCTGGGAGATCAAGAGGAATGGTCTAATGTAAACTaGTGGAACTTTCGGCTGGGG +
Preference number: 2 (lower is better)
Translates to: RMVRIASTAKKYLGDQEEWSNVN*WNFRLG
Trigger: CCCCAGCCGAAAGTTCCAGCAGTTTACATTAGACCA...TTCCTCTTGATCTCCCAGGTATTTCTTTGCTGTGCTGGCGATCCTCACCATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR GCA 90 bp AAGAGCACTAATGACGGGGAGGATGGAGACAATGTTTGGATTTACTTAGGAAGCCCTTGTCCTCCTCTTTaGCTGGCTCTAGGTCCCTTG +
Preference number: 2 (lower is better)
Translates to: KSTNDGEDGDNVWIYLGSPCPPL*LALGPL
Trigger: CAAGGGACCTAGAGCCAGGCAAAGAGGAGGACAAGG...GCTTCCTAAGTAAATCCAAACATTGTCTCCATCCTCCCCGTCATTAGTGCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430669.6
3UTR-3UTR CCA 90 bp AAGAGCACTAATGACGGGGAGGATGGAGACAATGTTTGGATTTACTTAGGAAGCGGGTCGTGTGTGTGTTaGTCAGAAGAGGGGCACCAT +
Preference number: 2 (lower is better)
Translates to: KSTNDGEDGDNVWIYLGSGSCVC*SEEGHH
Trigger: ATGGTGCCCCTCTTCTGACCAACACACACACGACCC...GCTTCCTAAGTAAATCCAAACATTGTCTCCATCCTCCCCGTCATTAGTGCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR CCA 90 bp ACAGCGATTCCACTTCACCATTCACTCTATGCAAAAACTACAATAAGCAAGCTTGCACTCCCAGCAGAGTaGACACGGCGCCATCCAGGA +
Preference number: 2 (lower is better)
Translates to: TAIPLHHSLYAKTTISKLALPAE*TRRHPG
Trigger: TCCTGGATGGCGCCGTGTCCACTCTGCTGGGAGTGC...AAGCTTGCTTATTGTAGTTTTTGCATAGAGTGAATGGTGAAGTGGAATCGCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR CCA 90 bp TCCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAAGTGTGGAGCTGGACTaGTTCCCCAAGGATGACAAA +
Preference number: 2 (lower is better)
Translates to: SSIHHNDPREGDYPPEAQSVELD*FPKDDK
Trigger: TTTGTCATCCTTGGGGAACCAGTCCAGCTCCACACT...TTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430669.6
3UTR-3UTR CCA 90 bp AAGAGCACTAATGACGGGGAGGATGGAGACAATGTTTGGATTTACTTAGGAAGCAGAGCAGTGTGGAGCTaGACTGGTTCCCCAAGGATG +
Preference number: 2 (lower is better)
Translates to: KSTNDGEDGDNVWIYLGSRAVWS*TGSPRM
Trigger: CATCCTTGGGGAACCAGTCCAGCTCCACACTGCTCT...GCTTCCTAAGTAAATCCAAACATTGTCTCCATCCTCCCCGTCATTAGTGCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430669.6
3UTR CAA 90 bp ATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATaGGGGTCCTGGATGGCAGCCAATGATCATAAGAGATGCCGTAGA +
Preference number: 2 (lower is better)
Translates to: ITMIREKEIIPLKHK*GSWMAANDHKRCRR
Trigger: TCTACGGCATCTCTTATGATCATTGGCTGCCATCCAGGACCCCAATTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR CAA 90 bp GCCACCTATTGGGTGATCCTTTGGCTTCAAGCTGCAGAGTTGTCTTaGCTGCCAGCCCCAAATCCTTTACCTTCTGTTTTCAAGATACTC +
Preference number: 2 (lower is better)
Translates to: ATYWVILWLQAAELS*LPAPNPLPSVFKIL
Trigger: GAGTATCTTGAAAACAGAAGGTAAAGGATTTGGGGCTGGCAGCAAAGACAACTCTGCAGCTTGAAGCCAAAGGATCACCCAATAGGTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR TCA 90 bp CCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAAGAACCATGGCAAAATTaGACACCACTACTACCGCTG +
Preference number: 2 (lower is better)
Translates to: PASITMIREKEIIPLKHKEPWQN*TPLLPL
Trigger: CAGCGGTAGTAGTGGTGTTCAATTTTGCCATGGTTC...TTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR TCA 90 bp TGGGGTCCTGGATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAGAATTGCAGGAAAAATaGGCAGAACCATGGCAAAAT +
Preference number: 2 (lower is better)
Translates to: WGPGWQPMIIRDAVDTRRELQEK*AEPWQN
Trigger: ATTTTGCCATGGTTCTGCTCATTTTTCCTGCAATTC...TCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCATCCAGGACCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR TCA 90 bp AAAGACTGGCAAATATTGGTAAAAGGTGGTGCTGTTTGTGTCCTTGTGGCGCTGCTGGTTCCCCAAGGATaGCAAAGCTTGGACACATCA +
Preference number: 2 (lower is better)
Translates to: KDWQILVKGGAVCVLVALLVPQG*QSLDTS
Trigger: TGATGTGTCCAAGCTTTGTCATCCTTGGGGAACCAG...CAGCGCCACAAGGACACAAACAGCACCACCTTTTACCAATATTTGCCAGTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430669.6
3UTR-3UTR GCA 90 bp ATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATTGGGGTCCTGGATGGCACCACCAGGATTAACGTaGTTTCTTCATATCTGCTCA +
Preference number: 2 (lower is better)
Translates to: IREKEIIPLKHKLGSWMAPPGLT*FLHICS
Trigger: TGAGCAGATATGAAGAAAGCACGTTAATCCTGGTGG...TGCCATCCAGGACCCCAATTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR GCA 90 bp ATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATTGGGGTCCTGGATGGCAAATGATCATAAGAGATaGCGTAGACACGAGGAGAGT +
Preference number: 2 (lower is better)
Translates to: IREKEIIPLKHKLGSWMANDHKR*RRHEES
Trigger: ACTCTCCTCGTGTCTACGGCATCTCTTATGATCATT...TGCCATCCAGGACCCCAATTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR GCA 90 bp AGCACAGCAAAGAAATACCTGGGAGATCAAGAGGAAACGGGAACACGCGCTGTGGGCTCGTATAGTTGCTaGAGATGGTCCTTACTTTTT +
Preference number: 2 (lower is better)
Translates to: STAKKYLGDQEETGTRAVGSYSC*RWSLLF
Trigger: AAAAAGTAAGGACCATCTGCAGCAACTATACGAGCC...CACAGCGCGTGTTCCCGTTTCCTCTTGATCTCCCAGGTATTTCTTTGCTGTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR GCA 90 bp AGGATGGTGAGGATCGCCAGCACAGCAAAGAAATACCTGGGAGATCAAGAGGAATCTCACATCTGGTTCTaGCCTGTCATGGTTCTAATC +
Preference number: 2 (lower is better)
Translates to: RMVRIASTAKKYLGDQEESHIWF*PVMVLI
Trigger: GATTAGAACCATGACAGGGCAGAACCAGATGTGAGA...TTCCTCTTGATCTCCCAGGTATTTCTTTGCTGTGCTGGCGATCCTCACCATCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR CCA 90 bp TCCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAAAGACTAATGAAGCTTaGTTGTGGCACGGAGCCCAA +
Preference number: 2 (lower is better)
Translates to: SSIHHNDPREGDYPPEAQKTNEA*LWHGAQ
Trigger: TTGGGCTCCGTGCCACAACCAAGCTTCATTAGTCTT...TTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR CCA 90 bp ATGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCACCTCCATAAAGACTaGCAAATATTGGTAAAAGGT +
Preference number: 2 (lower is better)
Translates to: MAQPRLSTRHVTEFSNTHHLHKD*QILVKG
Trigger: ACCTTTTACCAATATTTGCCAGTCTTTATGGAGGTG...GTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430669.6
3UTR-3UTR CCA 90 bp GCTCTCCTGATTTGTAACACAAATGTTCCAATTTCCACTGCCTGTTGTACATGTATACATGGACACGGCTaGCCTGGAGTGCCGAGTCCA +
Preference number: 2 (lower is better)
Translates to: ALLICNTNVPISTACCTCIHGHG*PGVPSP
Trigger: TGGACTCGGCACTCCAGGCCAGCCGTGTCCATGTAT...ACATGTACAACAGGCAGTGGAAATTGGAACATTTGTGTTACAAATCAGGAGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551623.1
3UTR CAA 90 bp TCCATGCTGAGAATTGCAGGAAAAATGAGCAGAACCATGGCAAAATaGAACACCACTACTACCGCTGCCTTGGGAGAATTTAGCGCACTG +
Preference number: 2 (lower is better)
Translates to: SMLRIAGKMSRTMAK*NTTTTAALGEFSAL
Trigger: CAGTGCGCTAAATTCTCCCAAGGCAGCGGTAGTAGTGGTGTTCAATTTTGCCATGGTTCTGCTCATTTTTCCTGCAATTCTCAGCATGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR TCA 90 bp CACATCGGTGTGAGAAGCGCTGGTCTACAGCGATTCCACTTCACCATTCACTCTAAGGACTCCATCGTCTaGTCCATTCTTGTAATTGTT +
Preference number: 2 (lower is better)
Translates to: HIGVRSAGLQRFHFTIHSKDSIV*SILVIV
Trigger: AACAATTACAAGAATGGATCAGACGATGGAGTCCTT...AGAGTGAATGGTGAAGTGGAATCGCTGTAGACCAGCGCTTCTCACACCGATGTG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR GCA 90 bp TCCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAGGGCACCATGCTGCATaGTTTTTAGAGTATACAGAC +
Preference number: 2 (lower is better)
Translates to: SSIHHNDPREGDYPPEAQGHHAA*FLEYTD
Trigger: GTCTGTATACTCTAAAAAGCATGCAGCATGGTGCCC...TTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR GCA 90 bp ATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATTGGGGTCCTGGATGGCACATGAATATCCACTCTaGTCTGACTCTCTTAACACT +
Preference number: 2 (lower is better)
Translates to: IREKEIIPLKHKLGSWMAHEYPL*SDSLNT
Trigger: AGTGTTAAGAGAGTCAGAGCAGAGTGGATATTCATG...TGCCATCCAGGACCCCAATTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR GCA 90 bp CCAGGCTCGTATAGTTGCTGCAGATGGTCCTTACTTTTTCAATTGCCTCCACAACCAGTCACTGTCAAATaGATCCTGAAGTCCCTGAAG +
Preference number: 2 (lower is better)
Translates to: PGSYSCCRWSLLFQLPPQPVTVK*ILKSLK
Trigger: CTTCAGGGACTTCAGGATGCATTTGACAGTGACTGG...TTGTGGAGGCAATTGAAAAAGTAAGGACCATCTGCAGCAACTATACGAGCCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR GCA 90 bp AGCACAGCAAAGAAATACCTGGGAGATCAAGAGGAAACGGGAACACGCGCTGTGCTCAGTACTGAAGCGTaGCAAACAAACCAATCATTT +
Preference number: 2 (lower is better)
Translates to: STAKKYLGDQEETGTRAVLSTEA*QTNQSF
Trigger: AAATGATTGGTTTGTTTGGCACGCTTCAGTACTGAG...CACAGCGCGTGTTCCCGTTTCCTCTTGATCTCCCAGGTATTTCTTTGCTGTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR CCA 90 bp TCCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAAATTGGGGTCCTGGATaGCAGCCAATGATCATAAGA +
Preference number: 2 (lower is better)
Translates to: SSIHHNDPREGDYPPEAQNWGPG*QPMIIR
Trigger: TCTTATGATCATTGGCTGCCATCCAGGACCCCAATT...TTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR CCA 90 bp ATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATTGGGGTCCTGGATGGCAATTTCTGGGAGACTGTaGGCCAAGAAAGAATTAACT +
Preference number: 2 (lower is better)
Translates to: IREKEIIPLKHKLGSWMAISGRL*AKKELT
Trigger: AGTTAATTCTTTCTTGGCCCACAGTCTCCCAGAAAT...TGCCATCCAGGACCCCAATTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR TCA 90 bp AAGAGCACTAATGACGGGGAGGATGGAGACAATGTTTGGATTTACTTAGGAAGCCAGTACAGTACATGGTaGACTCACACACGTGTTCAC +
Preference number: 2 (lower is better)
Translates to: KSTNDGEDGDNVWIYLGSQYSTW*THTRVH
Trigger: GTGAACACGTGTGTGAGTTCACCATGTACTGTACTG...GCTTCCTAAGTAAATCCAAACATTGTCTCCATCCTCCCCGTCATTAGTGCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR GCA 90 bp AAGAGCACTAATGACGGGGAGGATGGAGACAATGTTTGGATTTACTTAGGAAGCACAGTAACAATGAACTaGTGTCCTGGCACAGGGCAT +
Preference number: 2 (lower is better)
Translates to: KSTNDGEDGDNVWIYLGSTVTMN*CPGTGH
Trigger: ATGCCCTGTGCCAGGACAGCAGTTCATTGTTACTGT...GCTTCCTAAGTAAATCCAAACATTGTCTCCATCCTCCCCGTCATTAGTGCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR GCA 90 bp CCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAACCACCAGGATTAACGTaGTTTCTTCATATCTGCTCA +
Preference number: 2 (lower is better)
Translates to: PASITMIREKEIIPLKHKPPGLT*FLHICS
Trigger: TGAGCAGATATGAAGAAAGCACGTTAATCCTGGTGG...TTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR GCA 90 bp TCCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAACCACCAGGATTAACGTaGTTTCTTCATATCTGCTCA +
Preference number: 2 (lower is better)
Translates to: SSIHHNDPREGDYPPEAQPPGLT*FLHICS
Trigger: TGAGCAGATATGAAGAAAGCACGTTAATCCTGGTGG...TTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR GCA 90 bp CCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAAAATGATCATAAGAGATaGCGTAGACACGAGGAGAGT +
Preference number: 2 (lower is better)
Translates to: PASITMIREKEIIPLKHKNDHKR*RRHEES
Trigger: ACTCTCCTCGTGTCTACGGCATCTCTTATGATCATT...TTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR GCA 90 bp AGGATGGTGAGGATCGCCAGCACAGCAAAGAAATACCTGGGAGATCAAGAGGAAGATATTCGGGTAGTCTaGTTTCTGGGTGACTATATA +
Preference number: 2 (lower is better)
Translates to: RMVRIASTAKKYLGDQEEDIRVV*FLGDYI
Trigger: TATATAGTCACCCAGAAAGCAGACTACCCGAATATC...TTCCTCTTGATCTCCCAGGTATTTCTTTGCTGTGCTGGCGATCCTCACCATCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR CCA 90 bp AAGAGCACTAATGACGGGGAGGATGGAGACAATGTTTGGATTTACTTAGGAAGCAATGAACTGCTGTCCTaGCACAGGGCATCTTTTCCA +
Preference number: 2 (lower is better)
Translates to: KSTNDGEDGDNVWIYLGSNELLS*HRASFP
Trigger: TGGAAAAGATGCCCTGTGCCAGGACAGCAGTTCATT...GCTTCCTAAGTAAATCCAAACATTGTCTCCATCCTCCCCGTCATTAGTGCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR CCA 90 bp AAGAGCACTAATGACGGGGAGGATGGAGACAATGTTTGGATTTACTTAGGAAGCAAGACTAATGAAGCTTaGTTGTGGCACGGAGCCCAA +
Preference number: 2 (lower is better)
Translates to: KSTNDGEDGDNVWIYLGSKTNEA*LWHGAQ
Trigger: TTGGGCTCCGTGCCACAACCAAGCTTCATTAGTCTT...GCTTCCTAAGTAAATCCAAACATTGTCTCCATCCTCCCCGTCATTAGTGCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR CCA 90 bp AAGAGCACTAATGACGGGGAGGATGGAGACAATGTTTGGATTTACTTAGGAAGCCACAAATTGGGGTCCTaGATGGCAGCCAATGATCAT +
Preference number: 2 (lower is better)
Translates to: KSTNDGEDGDNVWIYLGSHKLGS*MAANDH
Trigger: ATGATCATTGGCTGCCATCCAGGACCCCAATTTGTG...GCTTCCTAAGTAAATCCAAACATTGTCTCCATCCTCCCCGTCATTAGTGCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR CCA 90 bp TCCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAATCAAAACATCATTTCTaGGAGACTGTGGGCCAAGAA +
Preference number: 2 (lower is better)
Translates to: SSIHHNDPREGDYPPEAQSKHHF*ETVGQE
Trigger: TTCTTGGCCCACAGTCTCCCAGAAATGATGTTTTGA...TTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR CCA 90 bp ATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAGTCTAGCTTTTCACTACCTTGGCTTTTaGTTTCAAGAGGAAAGGAGC +
Preference number: 2 (lower is better)
Translates to: MAANDHKRCRRHEESLAFHYLGF*FQEERS
Trigger: GCTCCTTTCCTCTTGAAACCAAAAGCCAAGGTAGTG...AAAAGCTAGACTCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR CCA 90 bp TCCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATTTCTGGGAGACTGTaGGCCAAGAAAGAATTAACT +
Preference number: 2 (lower is better)
Translates to: SSIHHNDPREGDYPPEAQISGRL*AKKELT
Trigger: AGTTAATTCTTTCTTGGCCCACAGTCTCCCAGAAAT...TTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR CCA 90 bp CACATCGGTGTGAGAAGCGCTGGTCTACAGCGATTCCACTTCACCATTCACTCTATTCTTGTAATTGTTTaGCATGATTTTCCCGGTTTC +
Preference number: 2 (lower is better)
Translates to: HIGVRSAGLQRFHFTIHSILVIV*HDFPGF
Trigger: GAAACCGGGAAAATCATGCCAAACAATTACAAGAAT...AGAGTGAATGGTGAAGTGGAATCGCTGTAGACCAGCGCTTCTCACACCGATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR CAA 90 bp AAACGACTTGCCTTGAGATCCAAACTAGGCTTAGATTCCCAAGAGTaGACACCAAAGTCCAATGCTAAATGCTTCCTAATTGTGGGGACT +
Preference number: 2 (lower is better)
Translates to: KRLALRSKLGLDSQE*TPKSNAKCFLIVGT
Trigger: AGTCCCCACAATTAGGAAGCATTTAGCATTGGACTTTGGTGTCAACTCTTGGGAATCTAAGCCTAGTTTGGATCTCAAGGCAAGTCGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR GCA 90 bp AAGAGCACTAATGACGGGGAGGATGGAGACAATGTTTGGATTTACTTAGGAAGCAATGATCATAAGAGATaGCGTAGACACGAGGAGAGT +
Preference number: 2 (lower is better)
Translates to: KSTNDGEDGDNVWIYLGSNDHKR*RRHEES
Trigger: ACTCTCCTCGTGTCTACGGCATCTCTTATGATCATT...GCTTCCTAAGTAAATCCAAACATTGTCTCCATCCTCCCCGTCATTAGTGCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR CCA 90 bp AAGAGCACTAATGACGGGGAGGATGGAGACAATGTTTGGATTTACTTAGGAAGCTCAAAACATCATTTCTaGGAGACTGTGGGCCAAGAA +
Preference number: 2 (lower is better)
Translates to: KSTNDGEDGDNVWIYLGSSKHHF*ETVGQE
Trigger: TTCTTGGCCCACAGTCTCCCAGAAATGATGTTTTGA...GCTTCCTAAGTAAATCCAAACATTGTCTCCATCCTCCCCGTCATTAGTGCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR CCA 90 bp ATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAGTCTAGCTTTTAATATTGGTAAAAGGTaGTGCTGTTTGTGTCCTTGT +
Preference number: 2 (lower is better)
Translates to: MAANDHKRCRRHEESLAFNIGKR*CCLCPC
Trigger: ACAAGGACACAAACAGCACCACCTTTTACCAATATT...AAAAGCTAGACTCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430669.6
3UTR TCA 72 bp CTGCCCATGGCAGTGGACGCTGGGTTCCGAGGGTTGTaGGAACGGGCCCCGCGAGGGCCCCAGCGGGCCCTA +
Preference number: 3 (lower is better)
Translates to: LPMAVDAGFRGL*ERAPRGPQRAL
Trigger: TAGGGCCCGCTGGGGCCCTCGCGGGGCCCGTTCTCACAACCCTCGGAACCCAGCGTCCACTGCCATGGGCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR CCA 72 bp TACTCCGAGTCGGAGGAATCAGACCCGCTGTGCGTGTaGCCGGGCGGCATGGCGAAGCGGACCACGCTGGGG +
Preference number: 3 (lower is better)
Translates to: YSESEESDPLCV*PGGMAKRTTLG
Trigger: CCCCAGCGTGGTCCGCTTCGCCATGCCGCCCGGCCACACGCACAGCGGGTCTGATTCCTCCGACTCGGAGTA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR CCA 72 bp GCTGGCAGTAGCCGGGCACGGAGCTGCCCATGGCAGTaGACGCTGGGTTCCGAGGGTTGTGAGAACGGGCCC +
Preference number: 3 (lower is better)
Translates to: AGSSRARSCPWQ*TLGSEGCENGP
Trigger: GGGCCCGTTCTCACAACCCTCGGAACCCAGCGTCCACTGCCATGGGCAGCTCCGTGCCCGGCTACTGCCAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR GCA 72 bp TGGCAGCTGAGGGTGTCCTGTGTCACGGTGACGGGCTaGACAGAGATCTCGGAGCGCGGCTCAGCGGTGGTG +
Preference number: 3 (lower is better)
Translates to: WQLRVSCVTVTG*TEISERGSAVV
Trigger: CACCACCGCTGAGCCGCGCTCCGAGATCTCTGTGCAGCCCGTCACCGTGACACAGGACACCCTCAGCTGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR CCA 72 bp CGGGCTGCACAGAGATCTCGGAGCGCGGCTCAGCGGTaGTGTAGTACACGTGCGTGTGGGGGTCGTACTCCG +
Preference number: 3 (lower is better)
Translates to: RAAQRSRSAAQR*CSTRACGGRTP
Trigger: CGGAGTACGACCCCCACACGCACGTGTACTACACCACCGCTGAGCCGCGCTCCGAGATCTCTGTGCAGCCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR CCA 72 bp TCTGGGCGGGAACAACCCCGGCTGAGAGGAGAGCGCTaGGATTCCAGCTGCCAGGTTTCCAGCTGGGGGCTC +
Preference number: 3 (lower is better)
Translates to: SGREQPRLRGER*DSSCQVSSWGL
Trigger: GAGCCCCCAGCTGGAAACCTGGCAGCTGGAATCCCAGCGCTCTCCTCTCAGCCGGGGTTGTTCCCGCCCAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR GCA 72 bp TCCCAGCAGAGTGGACACGGCGCCATCCAGGACGGGTaGAAACATGTGCTCCAGGGCAAGCACAGCCCTGCG +
Preference number: 3 (lower is better)
Translates to: SQQSGHGAIQDG*KHVLQGKHSPA
Trigger: CGCAGGGCTGTGCTTGCCCTGGAGCACATGTTTGCACCCGTCCTGGATGGCGCCGTGTCCACTCTGCTGGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR CCA 72 bp TGGACCCATTCTGGTCGGTGTGGCCGGATGTTGGCCTaGGAGGCAGCATACGCGACGGGGTCGTTGCTGACC +
Preference number: 3 (lower is better)
Translates to: WTHSGRCGRMLA*EAAYATGSLLT
Trigger: GGTCAGCAACGACCCCGTCGCGTATGCTGCCTCCCAGGCCAACATCCGGCCACACCGACCAGAATGGGTCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR CAA 90 bp TCAGATCCCGCCAGCATCAGCACTCCCAGCAGAGTGGACACGGCGCCATCCAGGACAGCCCTGCGGTTCTaGTCGCCGATGGCCGTCAGA +
Preference number: 3 (lower is better)
Translates to: SDPASISTPSRVDTAPSRTALRF*SPMAVR
Trigger: TCTGACGGCCATCGGCGACAAGAACCGCAGGGCTGT...CCTGGATGGCGCCGTGTCCACTCTGCTGGGAGTGCTGATGCTGGCGGGATCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR TCA 72 bp ACCTGGGAGATCAAGAGGAAACGGGAACACGCGCTGTaGCAGGGTGGATCGCGCCACCCTCCGTGTGCCCGA +
Preference number: 3 (lower is better)
Translates to: TWEIKRKREHAL*QGGSRHPPCAR
Trigger: TCGGGCACACGGAGGGTGGCGCGATCCACCCTGTCACAGCGCGTGTTCCCGTTTCCTCTTGATCTCCCAGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR TCA 72 bp CGCCCTGCTGGGCCTCGTAGTGCCGAAGCTCCTCGCTaGGGCCTGACACTGTCGTCTGGGAACTATACTCCG +
Preference number: 3 (lower is better)
Translates to: RPAGPRSAEAPR*GLTLSSGNYTP
Trigger: CGGAGTATAGTTCCCAGACGACAGTGTCAGGCCTCAGCGAGGAGCTTCGGCACTACGAGGCCCAGCAGGGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR TCA 72 bp TCCAGGTGGGGCTGCTGTCTCGGGTTCGAGGGTGGGTaGTGCCTGGATTCGGGATGGACCACAGTGGAGTGG +
Preference number: 3 (lower is better)
Translates to: SRWGCCLGFEGG*CLDSGWTTVEW
Trigger: CCACTCCACTGTGGTCCATCCCGAATCCAGGCATCACCCACCCTCGAACCCGAGACAGCAGCCCCACCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR GCA 72 bp GTGGACACGGCGCCATCCAGGACGGGTGCAAACATGTaGTCCAGGGCAAGCACAGCCCTGCGGTTCTTGTCG +
Preference number: 3 (lower is better)
Translates to: VDTAPSRTGANM*SRASTALRFLS
Trigger: CGACAAGAACCGCAGGGCTGTGCTTGCCCTGGAGCACATGTTTGCACCCGTCCTGGATGGCGCCGTGTCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR GCA 72 bp CGCGCTGTGACAGGGTGGATCGCGCCACCCTCCGTGTaGCCGACACAGCAGCATGGCAACGCCAGAAATGAA +
Preference number: 3 (lower is better)
Translates to: RAVTGWIAPPSV*PTQQHGNARNE
Trigger: TTCATTTCTGGCGTTGCCATGCTGCTGTGTCGGGCACACGGAGGGTGGCGCGATCCACCCTGTCACAGCGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR CCA 72 bp GATCAAGAGGAAACGGGAACACGCGCTGTGACAGGGTaGATCGCGCCACCCTCCGTGTGCCCGACACAGCAG +
Preference number: 3 (lower is better)
Translates to: DQEETGTRAVTG*IAPPSVCPTQQ
Trigger: CTGCTGTGTCGGGCACACGGAGGGTGGCGCGATCCACCCTGTCACAGCGCGTGTTCCCGTTTCCTCTTGATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR CCA 72 bp GGACCACAGTGGAGTGGGCGAAGACGGGGTTTTCTGTaGCTTCCACGATCACTTGGTGGGCAGGGCCTCCCG +
Preference number: 3 (lower is better)
Translates to: GPQWSGRRRGFL*LPRSLGGQGLP
Trigger: CGGGAGGCCCTGCCCACCAAGTGATCGTGGAAGCCACAGAAAACCCCGTCTTCGCCCACTCCACTGTGGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR CAA 90 bp CTCCGAGTCGGAGGAATCAGACCCGCTGTGCGTGTGGCCGGGCGGCATGGCGAAGCTGCAGAGTTGTCTTaGCTGCCAGCCCCAAATCCT +
Preference number: 3 (lower is better)
Translates to: LRVGGIRPAVRVAGRHGEAAELS*LPAPNP
Trigger: AGGATTTGGGGCTGGCAGCAAAGACAACTCTGCAGC...TTCGCCATGCCGCCCGGCCACACGCACAGCGGGTCTGATTCCTCCGACTCGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR CAA 90 bp ACACACGCACGCACGCACACACACACACACACACCCAGCAGCCACAAGCGGCTCGGTGCTGGTGTGGATTaGGATGGGGAGCCGACACTG +
Preference number: 3 (lower is better)
Translates to: THARTHTHTHTPSSHKRLGAGVD*DGEPTL
Trigger: CAGTGTCGGCTCCCCATCCAAATCCACACCAGCACC...GAGCCGCTTGTGGCTGCTGGGTGTGTGTGTGTGTGTGTGCGTGCGTGCGTGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR CAA 90 bp GGCTCAGGGGAGGGTGTGGGCAGGCGGTTCAAGCCGTTGGCTGGAGACACCTCACTAGCTCCATGGACATaGCAGGGAGGTAGCTGGAGA +
Preference number: 3 (lower is better)
Translates to: GSGEGVGRRFKPLAGDTSLAPWT*QGGSWR
Trigger: TCTCCAGCTACCTCCCTGCAATGTCCATGGAGCTAG...TGAGGTGTCTCCAGCCAACGGCTTGAACCGCCTGCCCACACCCTCCCCTGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR TCA 72 bp TGGCCTGGGAGGCAGCATACGCGACGGGGTCGTTGCTaGCCCAAGCCGTCAGGTAGATGTAGAAAGCGCTGG +
Preference number: 3 (lower is better)
Translates to: WPGRQHTRRGRC*PKPSGRCRKRW
Trigger: CCAGCGCTTTCTACATCTACCTGACGGCTTGGGTCAGCAACGACCCCGTCGCGTATGCTGCCTCCCAGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR GCA 72 bp CGGGTGCAAACATGTGCTCCAGGGCAAGCACAGCCCTaGGGTTCTTGTCGCCGATGGCCGTCAGAAAGGCCA +
Preference number: 3 (lower is better)
Translates to: RVQTCAPGQAQP*GSCRRWPSERP
Trigger: TGGCCTTTCTGACGGCCATCGGCGACAAGAACCGCAGGGCTGTGCTTGCCCTGGAGCACATGTTTGCACCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR CCA 72 bp GTAGTCGGCTTTGTCGTGGACCCATTCTGGTCGGTGTaGCCGGATGTTGGCCTGGGAGGCAGCATACGCGAC +
Preference number: 3 (lower is better)
Translates to: VVGFVVDPFWSV*PDVGLGGSIRD
Trigger: GTCGCGTATGCTGCCTCCCAGGCCAACATCCGGCCACACCGACCAGAATGGGTCCACGACAAAGCCGACTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR CAA 90 bp ACACACGCACGCACGCACACACACACACACACACCCAGCAGCCACAAGCGGCTCCATCCACTCTTGAATTaGGGGGTGTTGGGGGAGGGG +
Preference number: 3 (lower is better)
Translates to: THARTHTHTHTPSSHKRLHPLLN*GVLGEG
Trigger: CCCCTCCCCCAACACCCCCAAATTCAAGAGTGGATG...GAGCCGCTTGTGGCTGCTGGGTGTGTGTGTGTGTGTGTGCGTGCGTGCGTGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR CAA 90 bp ACACACGCACGCACGCACACACACACACACACACCCAGCAGCCACAAGCGGCTCGGGCCACATCCACTCTaGAATTTGGGGGTGTTGGGG +
Preference number: 3 (lower is better)
Translates to: THARTHTHTHTPSSHKRLGPHPL*NLGVLG
Trigger: CCCCAACACCCCCAAATTCAAGAGTGGATGTGGCCC...GAGCCGCTTGTGGCTGCTGGGTGTGTGTGTGTGTGTGTGCGTGCGTGCGTGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR CAA 90 bp GGCTCAGGGGAGGGTGTGGGCAGGCGGTTCAAGCCGTTGGCTGGAGACACCTCAACTACTACCGCTGCCTaGGGAGAATTTAGCGCACTG +
Preference number: 3 (lower is better)
Translates to: GSGEGVGRRFKPLAGDTSTTTAA*GEFSAL
Trigger: CAGTGCGCTAAATTCTCCCAAGGCAGCGGTAGTAGT...TGAGGTGTCTCCAGCCAACGGCTTGAACCGCCTGCCCACACCCTCCCCTGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR CAA 90 bp TCAGATCCCGCCAGCATCAGCACTCCCAGCAGAGTGGACACGGCGCCATCCAGGCCGGGATTCTCAGCCTaGTTTCAGGCATGTAGTCGG +
Preference number: 3 (lower is better)
Translates to: SDPASISTPSRVDTAPSRPGFSA*FQACSR
Trigger: CCGACTACATGCCTGAAACAAGGCTGAGAATCCCGG...CCTGGATGGCGCCGTGTCCACTCTGCTGGGAGTGCTGATGCTGGCGGGATCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR TCA 72 bp CTGGGCCTCGTAGTGCCGAAGCTCCTCGCTGAGGCCTaGCACTGTCGTCTGGGAACTATACTCCGAGTCGGA +
Preference number: 3 (lower is better)
Translates to: LGLVVPKLLAEA*HCRLGTILRVG
Trigger: TCCGACTCGGAGTATAGTTCCCAGACGACAGTGTCAGGCCTCAGCGAGGAGCTTCGGCACTACGAGGCCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR CCA 72 bp TTCAGGCATGTAGTCGGCTTTGTCGTGGACCCATTCTaGTCGGTGTGGCCGGATGTTGGCCTGGGAGGCAGC +
Preference number: 3 (lower is better)
Translates to: FRHVVGFVVDPF*SVWPDVGLGGS
Trigger: GCTGCCTCCCAGGCCAACATCCGGCCACACCGACCAGAATGGGTCCACGACAAAGCCGACTACATGCCTGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR CCA 72 bp ACTCAGATCCCGCCAGCATCAGCACTCCCAGCAGAGTaGACACGGCGCCATCCAGGACGGGTGCAAACATGT +
Preference number: 3 (lower is better)
Translates to: TQIPPASALPAE*TRRHPGRVQTC
Trigger: ACATGTTTGCACCCGTCCTGGATGGCGCCGTGTCCACTCTGCTGGGAGTGCTGATGCTGGCGGGATCTGAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR CCA 72 bp ACTTCCACCTTCGAATCCCTCCTCTCACACCGGACGTaGAAAGGCACGTGGGGGTCCTCAAACAGGCCGTGG +
Preference number: 3 (lower is better)
Translates to: TSTFESLLSHRT*KGTWGSSNRPW
Trigger: CCACGGCCTGTTTGAGGACCCCCACGTGCCTTTCCACGTCCGGTGTGAGAGGAGGGATTCGAAGGTGGAAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR CCA 72 bp TGTCCCTGGGGGCTGCTTGTGACCTCTCCCTTCATCTaGGGGCTGGTTACACGGATGCGTTCCCATGTGACC +
Preference number: 3 (lower is better)
Translates to: CPWGLLVTSPFI*GLVTRMRSHVT
Trigger: GGTCACATGGGAACGCATCCGTGTAACCAGCCCCCAGATGAAGGGAGAGGTCACAAGCAGCCCCCAGGGACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430669.6
3UTR TCA 72 bp GGAACCCTGATATTTCTGGGCGGGAACAACCCCGGCTaGGAGGAGAGCGCTGGGATTCCAGCTGCCAGGTTT +
Preference number: 3 (lower is better)
Translates to: GTLIFLGGNNPG*EESAGIPAARF
Trigger: AAACCTGGCAGCTGGAATCCCAGCGCTCTCCTCTCAGCCGGGGTTGTTCCCGCCCAGAAATATCAGGGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR TCA 72 bp GGGGCCTCTCCTCGCATTCCACGTCCTGCAGCTCAATaGCTTCCACCTTCGAATCCCTCCTCTCACACCGGA +
Preference number: 3 (lower is better)
Translates to: GASPRIPRPAAQ*LPPSNPSSHTG
Trigger: TCCGGTGTGAGAGGAGGGATTCGAAGGTGGAAGTCATTGAGCTGCAGGACGTGGAATGCGAGGAGAGGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR CCA 72 bp CGTTTCATGGGCAAAGCTGTGGCTGCTGTAGGGAGGTaGGGGGCTGTAGCGGGTATTGTCGTGTGTGTCGGT +
Preference number: 3 (lower is better)
Translates to: RFMGKAVAAVGR*GAVAGIVVCVG
Trigger: ACCGACACACACGACAATACCCGCTACAGCCCCCCACCTCCCTACAGCAGCCACAGCTTTGCCCATGAAACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR CCA 72 bp TGCCGAAGCTCCTCGCTGAGGCCTGACACTGTCGTCTaGGAACTATACTCCGAGTCGGAGGAATCAGACCCG +
Preference number: 3 (lower is better)
Translates to: CRSSSLRPDTVV*ELYSESEESDP
Trigger: CGGGTCTGATTCCTCCGACTCGGAGTATAGTTCCCAGACGACAGTGTCAGGCCTCAGCGAGGAGCTTCGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR CAA 90 bp GGGGCTGCTTGTGACCTCTCCCTTCATCTGGGGGCTGGTTACACGGATGCGTTCACCTTGTCCTCCTCTTaGCCTGGCTCTAGGTCCCTT +
Preference number: 3 (lower is better)
Translates to: GAACDLSLHLGAGYTDAFTLSSS*PGSRSL
Trigger: AAGGGACCTAGAGCCAGGCAAAGAGGAGGACAAGGT...GAACGCATCCGTGTAACCAGCCCCCAGATGAAGGGAGAGGTCACAAGCAGCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430669.6
3UTR-3UTR CAA 90 bp ACTCTGCATGGCTGGAGGGCACAGACTCCACGCAGGGATGCGTTTCTGGAACTAGGGCCACATCCACTCTaGAATTTGGGGGTGTTGGGG +
Preference number: 3 (lower is better)
Translates to: TLHGWRAQTPRRDAFLELGPHPL*NLGVLG
Trigger: CCCCAACACCCCCAAATTCAAGAGTGGATGTGGCCC...TAGTTCCAGAAACGCATCCCTGCGTGGAGTCTGTGCCCTCCAGCCATGCAGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR CAA 90 bp TGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCGGGCCACATCCACTCTaGAATTTGGGGGTGTTGGGG +
Preference number: 3 (lower is better)
Translates to: WPSQGSALGMSPNSLTPTGPHPL*NLGVLG
Trigger: CCCCAACACCCCCAAATTCAAGAGTGGATGTGGCCC...GGTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR CAA 90 bp ACACGCACAGCCAAACAAGAGGACCGCACACAACGACACCTAGAGAAGCCACCAATCGCGGCTGCCGGTTaGCACCAGGAGTTTGTAGGC +
Preference number: 3 (lower is better)
Translates to: TRTAKQEDRTQRHLEKPPIAAAG*HQEFVG
Trigger: GCCTACAAACTCCTGGTGCAAACCGGCAGCCGCGAT...TGGTGGCTTCTCTAGGTGTCGTTGTGTGCGGTCCTCTTGTTTGGCTGTGCGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR CAA 90 bp GGCTCAGGGGAGGGTGTGGGCAGGCGGTTCAAGCCGTTGGCTGGAGACACCTCATGGAAACGACTTGCCTaGAGATCCAAACTAGGCTTA +
Preference number: 3 (lower is better)
Translates to: GSGEGVGRRFKPLAGDTSWKRLA*RSKLGL
Trigger: TAAGCCTAGTTTGGATCTCAAGGCAAGTCGTTTCCA...TGAGGTGTCTCCAGCCAACGGCTTGAACCGCCTGCCCACACCCTCCCCTGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR CAA 90 bp CTCCGAGTCGGAGGAATCAGACCCGCTGTGCGTGTGGCCGGGCGGCATGGCGAACTCATTTATTTGACCTaGGTGAGGCCTTTATCAGGT +
Preference number: 3 (lower is better)
Translates to: LRVGGIRPAVRVAGRHGELIYLT*VRPLSG
Trigger: ACCTGATAAAGGCCTCACCAAGGTCAAATAAATGAG...TTCGCCATGCCGCCCGGCCACACGCACAGCGGGTCTGATTCCTCCGACTCGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR TCA 72 bp CCAGCCCGTCTCTCACTCGGGTGGTGCCATAAAGGCTaGCCCCCAGCAAGCCCAGAAAAAGGAAGATCACCA +
Preference number: 3 (lower is better)
Translates to: PARLSLGWCHKG*PPASPEKGRSP
Trigger: TGGTGATCTTCCTTTTTCTGGGCTTGCTGGGGGTCAGCCTTTATGGCACCACCCGAGTGAGAGACGGGCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR GCA 72 bp TGGGGGTCGTACTCCGTGCGGAGCTGGACAGTGGACTaGATGGTAATCTGCGTTTCATGGGCAAAGCTGTGG +
Preference number: 3 (lower is better)
Translates to: WGSYSVRSWTVD*MVICVSWAKLW
Trigger: CCACAGCTTTGCCCATGAAACGCAGATTACCATGCAGTCCACTGTCCAGCTCCGCACGGAGTACGACCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR GCA 72 bp CGAGGGCCCCAGCGGGCCCTATTGCTAGGGCCAGAATaGCCTTCAGTAGAAATTTCAAAAGCGTCTCTGCGC +
Preference number: 3 (lower is better)
Translates to: RGPQRALLLGPE*PSVEISKASLR
Trigger: GCGCAGAGACGCTTTTGAAATTTCTACTGAAGGGCATTCTGGCCCTAGCAATAGGGCCCGCTGGGGCCCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR CCA 72 bp TACACGTGCGTGTGGGGGTCGTACTCCGTGCGGAGCTaGACAGTGGACTGCATGGTAATCTGCGTTTCATGG +
Preference number: 3 (lower is better)
Translates to: YTCVWGSYSVRS*TVDCMVICVSW
Trigger: CCATGAAACGCAGATTACCATGCAGTCCACTGTCCAGCTCCGCACGGAGTACGACCCCCACACGCACGTGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR CAA 90 bp ACACACGCACGCACGCACACACACACACACACACCCAGCAGCCACAAGCGGCTCGGGGGTTTCCAATCTTaGGCCTCTTTGCTTCAGATT +
Preference number: 3 (lower is better)
Translates to: THARTHTHTHTPSSHKRLGGFQS*ASLLQI
Trigger: AATCTGAAGCAAAGAGGCCAAAGATTGGAAACCCCC...GAGCCGCTTGTGGCTGCTGGGTGTGTGTGTGTGTGTGTGCGTGCGTGCGTGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR CAA 90 bp CGGGGTTTTCTGTGGCTTCCACGATCACTTGGTGGGCAGGGCCTCCCGCGCCCTTCCTTACTTTTTCAATaGCCTCCACAAAGTCTGAGG +
Preference number: 3 (lower is better)
Translates to: RGFLWLPRSLGGQGLPRPSLLFQ*PPQSLR
Trigger: CCTCAGACTTTGTGGAGGCAATTGAAAAAGTAAGGA...AGGGCGCGGGAGGCCCTGCCCACCAAGTGATCGTGGAAGCCACAGAAAACCCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR CCA 72 bp AATACCAAGGTAAACCTGTCAGCCAGGGACAGCCTCTaGCAGACACTCTGCATGGCTGGAGGGCACAGACTC +
Preference number: 3 (lower is better)
Translates to: NTKVNLSARDSL*QTLCMAGGHRL
Trigger: GAGTCTGTGCCCTCCAGCCATGCAGAGTGTCTGCCAGAGGCTGTCCCTGGCTGACAGGTTTACCTTGGTATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR CCA 72 bp TCCACTGCCTGTTGTACATGTATACATGGACACGGCTaGCCTGGAGTGCCGAGTCCAGGTGTTGTAGGAGCG +
Preference number: 3 (lower is better)
Translates to: STACCTCIHGHG*PGVPSPGVVGA
Trigger: CGCTCCTACAACACCTGGACTCGGCACTCCAGGCCAGCCGTGTCCATGTATACATGTACAACAGGCAGTGGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551623.1
3UTR-3UTR CAA 90 bp TCCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAACGGTGTGGCCGGATGTaGGCCTGGGAGGCAGCATAC +
Preference number: 3 (lower is better)
Translates to: SSIHHNDPREGDYPPEAQRCGRM*AWEAAY
Trigger: GTATGCTGCCTCCCAGGCCAACATCCGGCCACACCG...TTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR CAA 90 bp ATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATTGGGGTCCTGGATGGCAGGCACGGCACTGAGCTaGATTCCGATGAGGCCCATC +
Preference number: 3 (lower is better)
Translates to: IREKEIIPLKHKLGSWMAGTALS*IPMRPI
Trigger: GATGGGCCTCATCGGAATCAAGCTCAGTGCCGTGCC...TGCCATCCAGGACCCCAATTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR CAA 90 bp TGGGGTCCTGGATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAAACCCCAGGAGAACCTaGTCCTCCTCTTTGCCTGGC +
Preference number: 3 (lower is better)
Translates to: WGPGWQPMIIRDAVDTRRNPRRT*SSSLPG
Trigger: GCCAGGCAAAGAGGAGGACAAGGTTCTCCTGGGGTT...TCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCATCCAGGACCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430669.6
3UTR TCA 72 bp AGAGAGCAGTGTGGAGCTGGACTGGTTCCCCAAGGATaGCAAAGCTTGGACACATCAGCCTTGCTCTGGGGA +
Preference number: 3 (lower is better)
Translates to: REQCGAGLVPQG*QSLDTSALLWG
Trigger: TCCCCAGAGCAAGGCTGATGTGTCCAAGCTTTGTCATCCTTGGGGAACCAGTCCAGCTCCACACTGCTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430669.6
3UTR CCA 72 bp TGCCTGTTGTACATGTATACATGGACACGGCTGGCCTaGAGTGCCGAGTCCAGGTGTTGTAGGAGCGCTTCT +
Preference number: 3 (lower is better)
Translates to: CLLYMYTWTRLA*SAESRCCRSAS
Trigger: AGAAGCGCTCCTACAACACCTGGACTCGGCACTCCAGGCCAGCCGTGTCCATGTATACATGTACAACAGGCA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551623.1
3UTR-3UTR CAA 90 bp ATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATTGGGGTCCTGGATGGCACATCCACTCTTGAATTaGGGGGTGTTGGGGGAGGGG +
Preference number: 3 (lower is better)
Translates to: IREKEIIPLKHKLGSWMAHPLLN*GVLGEG
Trigger: CCCCTCCCCCAACACCCCCAAATTCAAGAGTGGATG...TGCCATCCAGGACCCCAATTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR CAA 90 bp ACACACGCACGCACGCACACACACACACACACACCCAGCAGCCACAAGCGGCTCGGATGGAGACAATGTTaGGATTTACTTAGGAAGCAC +
Preference number: 3 (lower is better)
Translates to: THARTHTHTHTPSSHKRLGWRQC*DLLRKH
Trigger: GTGCTTCCTAAGTAAATCCAAACATTGTCTCCATCC...GAGCCGCTTGTGGCTGCTGGGTGTGTGTGTGTGTGTGTGCGTGCGTGCGTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR CAA 90 bp CCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAAGGGAGAGCAGGTCCCTaGTGGAGCTGGTGCTCTCTG +
Preference number: 3 (lower is better)
Translates to: PASITMIREKEIIPLKHKGRAGP*WSWCSL
Trigger: CAGAGAGCACCAGCTCCACAAGGGACCTGCTCTCCC...TTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR CAA 90 bp CCAGGCTCGTATAGTTGCTGCAGATGGTCCTTACTTTTTCAATTGCCTCCACAATACGCGACGGGGTCGTaGCTGACCCAAGCCGTCAGG +
Preference number: 3 (lower is better)
Translates to: PGSYSCCRWSLLFQLPPQYATGS*LTQAVR
Trigger: CCTGACGGCTTGGGTCAGCAACGACCCCGTCGCGTA...TTGTGGAGGCAATTGAAAAAGTAAGGACCATCTGCAGCAACTATACGAGCCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR CAA 90 bp GGCCGCAGCACCATGGCAGAGGAGGAGAGTGCAGAAGTAGTTCTGCTTTCCCACATAATGGGCCACCTATaGGGTGATCCTTTGGCTTCA +
Preference number: 3 (lower is better)
Translates to: GRSTMAEEESAEVVLLSHIMGHL*GDPLAS
Trigger: TGAAGCCAAAGGATCACCCAATAGGTGGCCCATTAT...GTGGGAAAGCAGAACTACTTCTGCACTCTCCTCCTCTGCCATGGTGCTGCGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR TCA 72 bp CGATGGCCGTCAGAAAGGCCAAAGCAACGTGAACGGTaGACTCCACTCCTATGCCAACAGAAGCGATCAGGA +
Preference number: 3 (lower is better)
Translates to: RWPSERPKQRER*TPLLCQQKRSG
Trigger: TCCTGATCGCTTCTGTTGGCATAGGAGTGGAGTTCACCGTTCACGTTGCTTTGGCCTTTCTGACGGCCATCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR TCA 72 bp TCATCTGGGGGCTGGTTACACGGATGCGTTCCCATGTaGCCAATTCGCTGTGGCATGCACCTCCATAAAGAC +
Preference number: 3 (lower is better)
Translates to: SSGGWLHGCVPM*PIRCGMHLHKD
Trigger: GTCTTTATGGAGGTGCATGCCACAGCGAATTGGTCACATGGGAACGCATCCGTGTAACCAGCCCCCAGATGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430669.6
3UTR GCA 72 bp TTGGGGTCCTGGATGGCAGCCAATGATCATAAGAGATaGCGTAGACACGAGGAGAGTCTAGCTTTTGCCGGG +
Preference number: 3 (lower is better)
Translates to: LGSWMAANDHKR*RRHEESLAFAG
Trigger: CCCGGCAAAAGCTAGACTCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCATCCAGGACCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR GCA 72 bp ATTGTGCTGGGTGAGGGCACTCCACAATGGCGGGGCTaGTCTGCGGGCCAATCTTTTGTTGAACAATTTAGC +
Preference number: 3 (lower is better)
Translates to: IVLGEGTPQWRG*SAGQSFVEQFS
Trigger: GCTAAATTGTTCAACAAAAGATTGGCCCGCAGAGCAGCCCCGCCATTGTGGAGTGCCCTCACCCAGCACAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR CAA 90 bp CGCCACCCTCCGTGTGCCCGACACAGCAGCATGGCAACGCCAGAAATGAACAAAAAGATCACCACTACCTaGGCTTTTGGTTTCAAGAGG +
Preference number: 3 (lower is better)
Translates to: RHPPCARHSSMATPEMNKKITTT*AFGFKR
Trigger: CCTCTTGAAACCAAAAGCCAAGGTAGTGGTGATCTT...TTTGTTCATTTCTGGCGTTGCCATGCTGCTGTGTCGGGCACACGGAGGGTGGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR CAA 90 bp GACACTGTCGTCTGGGAACTATACTCCGAGTCGGAGGAATCAGACCCGCTGTGCCTATTGGGTGATCCTTaGGCTTCAAGCTGCAGAGTT +
Preference number: 3 (lower is better)
Translates to: DTVVWELYSESEESDPLCLLGDP*ASSCRV
Trigger: AACTCTGCAGCTTGAAGCCAAAGGATCACCCAATAG...GCACAGCGGGTCTGATTCCTCCGACTCGGAGTATAGTTCCCAGACGACAGTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR CAA 90 bp CCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAAGTGCTGTTTGTGTCCTaGTGGCGCTGCACCGACCCT +
Preference number: 3 (lower is better)
Translates to: PASITMIREKEIIPLKHKVLFVS*WRCTDP
Trigger: AGGGTCGGTGCAGCGCCACAAGGACACAAACAGCAC...TTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430669.6
3UTR TCA 72 bp ATGGGAAGCCCTTTTAAGTGCTTGAAAGAGGAACCCTaGTATTTCTGGGCGGGAACAACCCCGGCTGAGAGG +
Preference number: 3 (lower is better)
Translates to: MGSPFKCLKEEP*YFWAGTTPAER
Trigger: CCTCTCAGCCGGGGTTGTTCCCGCCCAGAAATATCAGGGTTCCTCTTTCAAGCACTTAAAAGGGCTTCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR CCA 72 bp TGTTCCAATTTCCACTGCCTGTTGTACATGTATACATaGACACGGCTGGCCTGGAGTGCCGAGTCCAGGTGT +
Preference number: 3 (lower is better)
Translates to: CSNFHCLLYMYT*TRLAWSAESRC
Trigger: ACACCTGGACTCGGCACTCCAGGCCAGCCGTGTCCATGTATACATGTACAACAGGCAGTGGAAATTGGAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551623.1
3UTR-3UTR CAA 90 bp TGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCTTTTGCCGGGCTGATTaGAAAGGATTAGGTGGATGT +
Preference number: 3 (lower is better)
Translates to: WPSQGSALGMSPNSLTPTFCRAD*KGLGGC
Trigger: ACATCCACCTAATCCTTTCAAATCAGCCCGGCAAAA...GGTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR CAA 90 bp CGCCACCCTCCGTGTGCCCGACACAGCAGCATGGCAACGCCAGAAATGAACAAAGGATGGAGACAATGTTaGGATTTACTTAGGAAGCAC +
Preference number: 3 (lower is better)
Translates to: RHPPCARHSSMATPEMNKGWRQC*DLLRKH
Trigger: GTGCTTCCTAAGTAAATCCAAACATTGTCTCCATCC...TTTGTTCATTTCTGGCGTTGCCATGCTGCTGTGTCGGGCACACGGAGGGTGGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR CAA 90 bp AAGAGCACTAATGACGGGGAGGATGGAGACAATGTTTGGATTTACTTAGGAAGCCTGGCTCTAGGTCCCTaGGCTGCCCTTGTCAGTGGC +
Preference number: 3 (lower is better)
Translates to: KSTNDGEDGDNVWIYLGSLALGP*AALVSG
Trigger: GCCACTGACAAGGGCAGCCAAGGGACCTAGAGCCAG...GCTTCCTAAGTAAATCCAAACATTGTCTCCATCCTCCCCGTCATTAGTGCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430669.6
3UTR-3UTR CAA 90 bp TGGGGTCCTGGATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAGGGGGTTTCCAATCTTaGGCCTCTTTGCTTCAGATT +
Preference number: 3 (lower is better)
Translates to: WGPGWQPMIIRDAVDTRRGGFQS*ASLLQI
Trigger: AATCTGAAGCAAAGAGGCCAAAGATTGGAAACCCCC...TCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCATCCAGGACCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR CAA 90 bp ACACGCACAGCCAAACAAGAGGACCGCACACAACGACACCTAGAGAAGCCACCAAGAACCATGGCAAAATaGAACACCACTACTACCGCT +
Preference number: 3 (lower is better)
Translates to: TRTAKQEDRTQRHLEKPPRTMAK*NTTTTA
Trigger: AGCGGTAGTAGTGGTGTTCAATTTTGCCATGGTTCT...TGGTGGCTTCTCTAGGTGTCGTTGTGTGCGGTCCTCTTGTTTGGCTGTGCGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR CAA 90 bp CCACTGCCTGTTGTACATGTATACATGGACACGGCTGGCCTGGAGTGCCGAGTCGGTCTGTATCATGAGTaGAGGATTAAACATAGCCTC +
Preference number: 3 (lower is better)
Translates to: PLPVVHVYMDTAGLECRVGLYHE*RIKHSL
Trigger: GAGGCTATGTTTAATCCTCAACTCATGATACAGACC...GACTCGGCACTCCAGGCCAGCCGTGTCCATGTATACATGTACAACAGGCAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551623.1
3UTR TCA 72 bp GGGGTGTGTCCATCCTCCTGCTTTCCCACATCACATTaGAAGAGCACTAATGACGGGGAGGATGGAGACAAT +
Preference number: 3 (lower is better)
Translates to: GVCPSSCFPTSH*KSTNDGEDGDN
Trigger: ATTGTCTCCATCCTCCCCGTCATTAGTGCTCTTTCAATGTGATGTGGGAAAGCAGGAGGATGGACACACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR GCA 72 bp TATCCAAGAGCAGGTCCCTCACAAAGCCATGGAGGCTaGTCAAAGAAGCAAGTGGTTTCCTCCTCTGCAGTT +
Preference number: 3 (lower is better)
Translates to: YPRAGPSQSHGG*SKKQVVSSSAV
Trigger: AACTGCAGAGGAGGAAACCACTTGCTTCTTTGAGCAGCCTCCATGGCTTTGTGAGGGACCTGCTCTTGGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR CAA 90 bp ATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATTGGGGTCCTGGATGGCAGGGGGTTTCCAATCTTaGGCCTCTTTGCTTCAGATT +
Preference number: 3 (lower is better)
Translates to: IREKEIIPLKHKLGSWMAGGFQS*ASLLQI
Trigger: AATCTGAAGCAAAGAGGCCAAAGATTGGAAACCCCC...TGCCATCCAGGACCCCAATTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR CAA 90 bp TGGGGTCCTGGATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGATTTTGCCGGGCTGATTaGAAAGGATTAGGTGGATGT +
Preference number: 3 (lower is better)
Translates to: WGPGWQPMIIRDAVDTRRFCRAD*KGLGGC
Trigger: ACATCCACCTAATCCTTTCAAATCAGCCCGGCAAAA...TCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCATCCAGGACCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR CAA 90 bp AAGAGCACTAATGACGGGGAGGATGGAGACAATGTTTGGATTTACTTAGGAAGCCATCCACTCTTGAATTaGGGGGTGTTGGGGGAGGGG +
Preference number: 3 (lower is better)
Translates to: KSTNDGEDGDNVWIYLGSHPLLN*GVLGEG
Trigger: CCCCTCCCCCAACACCCCCAAATTCAAGAGTGGATG...GCTTCCTAAGTAAATCCAAACATTGTCTCCATCCTCCCCGTCATTAGTGCTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR CAA 90 bp AGCACAGCAAAGAAATACCTGGGAGATCAAGAGGAAACGGGAACACGCGCTGTGTTTCCTTTCTACAGTTaGAAGGAGAGGGAGCGTAGG +
Preference number: 3 (lower is better)
Translates to: STAKKYLGDQEETGTRAVFPFYS*KERERR
Trigger: CCTACGCTCCCTCTCCTTCAAACTGTAGAAAGGAAA...CACAGCGCGTGTTCCCGTTTCCTCTTGATCTCCCAGGTATTTCTTTGCTGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR CCA 72 bp ACCAAGCAGCCAATGTCTTGGTCTAATGTAAACTGCTaGAACTTTCGGCTGGGGCATGTATCAGCAGCCACA +
Preference number: 3 (lower is better)
Translates to: TKQPMSWSNVNC*NFRLGHVSAAT
Trigger: TGTGGCTGCTGATACATGCCCCAGCCGAAAGTTCCAGCAGTTTACATTAGACCAAGACATTGGCTGCTTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR CAA 90 bp AGGATGGTGAGGATCGCCAGCACAGCAAAGAAATACCTGGGAGATCAAGAGGAAGGGGGTTTCCAATCTTaGGCCTCTTTGCTTCAGATT +
Preference number: 3 (lower is better)
Translates to: RMVRIASTAKKYLGDQEEGGFQS*ASLLQI
Trigger: AATCTGAAGCAAAGAGGCCAAAGATTGGAAACCCCC...TTCCTCTTGATCTCCCAGGTATTTCTTTGCTGTGCTGGCGATCCTCACCATCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR TCA 72 bp GATGGTCCTTACTTTTTCAATTGCCTCCACAAAGTCTaGGGTGTCCCGCAAGCCGTTGAGGTAGAAAGGGAA +
Preference number: 3 (lower is better)
Translates to: DGPYFFNCLHKV*GVPQAVEVERE
Trigger: TTCCCTTTCTACCTCAACGGCTTGCGGGACACCTCAGACTTTGTGGAGGCAATTGAAAAAGTAAGGACCATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR GCA 72 bp TGGCATGATTTTCCCGGTTTCCCAGTCACTGTCAAATaGATCCTGAAGTCCCTGAAGCCAGTCTCTGAAGTA +
Preference number: 3 (lower is better)
Translates to: WHDFPGFPVTVK*ILKSLKPVSEV
Trigger: TACTTCAGAGACTGGCTTCAGGGACTTCAGGATGCATTTGACAGTGACTGGGAAACCGGGAAAATCATGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR GCA 72 bp AAAACCAAGCAGCCAATGTCTTGGTCTAATGTAAACTaGTGGAACTTTCGGCTGGGGCATGTATCAGCAGCC +
Preference number: 3 (lower is better)
Translates to: KTKQPMSWSNVN*WNFRLGHVSAA
Trigger: GGCTGCTGATACATGCCCCAGCCGAAAGTTCCAGCAGTTTACATTAGACCAAGACATTGGCTGCTTGGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR CCA 72 bp AAGGAGATTATCCCCCTGAAGCACAAATTGGGGTCCTaGATGGCAGCCAATGATCATAAGAGATGCCGTAGA +
Preference number: 3 (lower is better)
Translates to: KEIIPLKHKLGS*MAANDHKRCRR
Trigger: TCTACGGCATCTCTTATGATCATTGGCTGCCATCCAGGACCCCAATTTGTGCTTCAGGGGGATAATCTCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR CCA 72 bp AACTGGACAGCCCCAGGCTCGTATAGTTGCTGCAGATaGTCCTTACTTTTTCAATTGCCTCCACAAAGTCTG +
Preference number: 3 (lower is better)
Translates to: NWTAPGSYSCCR*SLLFQLPPQSL
Trigger: CAGACTTTGTGGAGGCAATTGAAAAAGTAAGGACCATCTGCAGCAACTATACGAGCCTGGGGCTGTCCAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR CCA 72 bp TCAGATGATTCCTCAGCACATCGGTGTGAGAAGCGCTaGTCTACAGCGATTCCACTTCACCATTCACTCTAT +
Preference number: 3 (lower is better)
Translates to: SDDSSAHRCEKR*STAIPLHHSLY
Trigger: ATAGAGTGAATGGTGAAGTGGAATCGCTGTAGACCAGCGCTTCTCACACCGATGTGCTGAGGAATCATCTGA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR CAA 90 bp CCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAAGGGGGTTTCCAATCTTaGGCCTCTTTGCTTCAGATT +
Preference number: 3 (lower is better)
Translates to: PASITMIREKEIIPLKHKGGFQS*ASLLQI
Trigger: AATCTGAAGCAAAGAGGCCAAAGATTGGAAACCCCC...TTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR CAA 90 bp CCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAACCACTACCTTGGCTTTaGGTTTCAAGAGGAAAGGAG +
Preference number: 3 (lower is better)
Translates to: PASITMIREKEIIPLKHKPLPWL*VSRGKE
Trigger: CTCCTTTCCTCTTGAAACCAAAAGCCAAGGTAGTGG...TTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR CAA 90 bp CCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATTTTGCCGGGCTGATTaGAAAGGATTAGGTGGATGT +
Preference number: 3 (lower is better)
Translates to: PASITMIREKEIIPLKHKFCRAD*KGLGGC
Trigger: ACATCCACCTAATCCTTTCAAATCAGCCCGGCAAAA...TTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR CAA 90 bp TCCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAATTTTGCCGGGCTGATTaGAAAGGATTAGGTGGATGT +
Preference number: 3 (lower is better)
Translates to: SSIHHNDPREGDYPPEAQFCRAD*KGLGGC
Trigger: ACATCCACCTAATCCTTTCAAATCAGCCCGGCAAAA...TTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR CAA 90 bp AGCACAGCAAAGAAATACCTGGGAGATCAAGAGGAAACGGGAACACGCGCTGTGCTTTACCTTATGACTTaGAGGACTACATTCCACAAC +
Preference number: 3 (lower is better)
Translates to: STAKKYLGDQEETGTRAVLYLMT*RTTFHN
Trigger: GTTGTGGAATGTAGTCCTCAAAGTCATAAGGTAAAG...CACAGCGCGTGTTCCCGTTTCCTCTTGATCTCCCAGGTATTTCTTTGCTGTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR TCA 72 bp TTTCTAACCCGAGACAATAATGGGCCACCTATTGGGTaGTCCTTTGGCTTCAAGCTGCAGAGTTGTCTTTGC +
Preference number: 3 (lower is better)
Translates to: FLTRDNNGPPIG*SFGFKLQSCLC
Trigger: GCAAAGACAACTCTGCAGCTTGAAGCCAAAGGATCACCCAATAGGTGGCCCATTATTGTCTCGGGTTAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR TCA 72 bp GAGGAGAGTGCAGAAGTAGTTCTGCTTTCCCACCATTaGGGGCTAAGGTCTGGAATCCTTCATGAATACCAA +
Preference number: 3 (lower is better)
Translates to: EESAEVVLLSHH*GLRSGILHEYQ
Trigger: TTGGTATTCATGAAGGATTCCAGACCTTAGCCCTCAATGGTGGGAAAGCAGAACTACTTCTGCACTCTCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR CAA 90 bp ATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATTGGGGTCCTGGATGGCACTTCTGTCAAAAGACTaGATGACTACTATGTACACT +
Preference number: 3 (lower is better)
Translates to: IREKEIIPLKHKLGSWMALLSKD*MTTMYT
Trigger: AGTGTACATAGTAGTCATCAAGTCTTTTGACAGAAG...TGCCATCCAGGACCCCAATTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000430669.6
ENST00000437951.5
3UTR TCA 72 bp TCCCATCCTAGAAAATGGGAAGCCCTTTTAAGTGCTTaGAAGAGGAACCCTGATATTTCTGGGCGGGAACAA +
Preference number: 3 (lower is better)
Translates to: SHPRKWEALLSA*KRNPDISGREQ
Trigger: TTGTTCCCGCCCAGAAATATCAGGGTTCCTCTTTCAAGCACTTAAAAGGGCTTCCCATTTTCTAGGATGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR TCA 72 bp AAAAGCAGCCCACTTCTGCAGGCTGCTAATCCACTGTaGAATGCTTCTGCATCTTACGGCAGAATCTCTAAT +
Preference number: 3 (lower is better)
Translates to: KSSPLLQAANPL*NASASYGRISN
Trigger: ATTAGAGATTCTGCCGTAAGATGCAGAAGCATTTCACAGTGGATTAGCAGCCTGCAGAAGTGGGCTGCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR GCA 72 bp ACAATGATTTCTAAAACATGTCTCCTTGCACACGCCTaGTTACCTGACAATGAAGTCGAACTCAGATCCCGC +
Preference number: 3 (lower is better)
Translates to: TMISKTCLLAHA*LPDNEVELRSR
Trigger: GCGGGATCTGAGTTCGACTTCATTGTCAGGTAAGCAGGCGTGTGCAAGGAGACATGTTTTAGAAATCATTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR CCA 72 bp AAGAGCACTAATGACGGGGAGGATGGAGACAATGTTTaGATTTACTTAGGAAGCACGTACCCTAAACACTGG +
Preference number: 3 (lower is better)
Translates to: KSTNDGEDGDNV*IYLGSTYPKHW
Trigger: CCAGTGTTTAGGGTACGTGCTTCCTAAGTAAATCCAAACATTGTCTCCATCCTCCCCGTCATTAGTGCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR CCA 72 bp CCTCACAAAGCCATGGAGGCTGCTCAAAGAAGCAAGTaGTTTCCTCCTCTGCAGTTCTCAAATTCTTTTCAA +
Preference number: 3 (lower is better)
Translates to: PHKAMEAAQRSK*FPPLQFSNSFQ
Trigger: TTGAAAAGAATTTGAGAACTGCAGAGGAGGAAACCACTTGCTTCTTTGAGCAGCCTCCATGGCTTTGTGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR-3UTR CAA 90 bp AAGAGCACTAATGACGGGGAGGATGGAGACAATGTTTGGATTTACTTAGGAAGCTTTTGCCGGGCTGATTaGAAAGGATTAGGTGGATGT +
Preference number: 3 (lower is better)
Translates to: KSTNDGEDGDNVWIYLGSFCRAD*KGLGGC
Trigger: ACATCCACCTAATCCTTTCAAATCAGCCCGGCAAAA...GCTTCCTAAGTAAATCCAAACATTGTCTCCATCCTCCCCGTCATTAGTGCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR-3UTR CAA 90 bp CCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAAAAAGACTGGCAAATATaGGTAAAAGGTGGTGCTGTT +
Preference number: 3 (lower is better)
Translates to: PASITMIREKEIIPLKHKKDWQI*VKGGAV
Trigger: AACAGCACCACCTTTTACCAATATTTGCCAGTCTTT...TTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000430669.6
3UTR TCA 72 bp TTGCACCAGGAGTTTGTAGGCAAGGACTCCATCGTCTaGTCCATTCTTGTAATTGTTTGGCATGATTTTCCC +
Preference number: 3 (lower is better)
Translates to: LHQEFVGKDSIV*SILVIVWHDFP
Trigger: GGGAAAATCATGCCAAACAATTACAAGAATGGATCAGACGATGGAGTCCTTGCCTACAAACTCCTGGTGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR GCA 72 bp ACACACACACACACACAACCTCTCAGTACTGAAGCGTaGCAAACAAACCAATCATTTCTCACATCTGGTTCT +
Preference number: 3 (lower is better)
Translates to: THTHTQPLSTEA*QTNQSFLTSGS
Trigger: AGAACCAGATGTGAGAAATGATTGGTTTGTTTGGCACGCTTCAGTACTGAGAGGTTGTGTGTGTGTGTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR CCA 72 bp GTTACACAAACACAAAAATATGGAATGCGACCTGAATaGCTGGGCAGACTGAAAGCACAAACACAATGCCGA +
Preference number: 3 (lower is better)
Translates to: VTQTQKYGMRPE*LGRLKAQTQCR
Trigger: TCGGCATTGTGTTTGTGCTTTCAGTCTGCCCAGCCATTCAGGTCGCATTCCATATTTTTGTGTTTGTGTAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR TCA 72 bp CTCCATCGTCTGATCCATTCTTGTAATTGTTTGGCATaGTTTTCCCGGTTTCCCAGTCACTGTCAAATGCAT +
Preference number: 3 (lower is better)
Translates to: LHRLIHSCNCLA*FSRFPSHCQMH
Trigger: ATGCATTTGACAGTGACTGGGAAACCGGGAAAATCATGCCAAACAATTACAAGAATGGATCAGACGATGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR TCA 72 bp ATGTGTTACACAAACACAAAAATATGGAATGCGACCTaGATGGCTGGGCAGACTGAAAGCACAAACACAATG +
Preference number: 3 (lower is better)
Translates to: MCYTNTKIWNAT*MAGQTESTNTM
Trigger: CATTGTGTTTGTGCTTTCAGTCTGCCCAGCCATTCAGGTCGCATTCCATATTTTTGTGTTTGTGTAACACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR GCA 72 bp GTGCCAAACAAACCAATCATTTCTCACATCTGGTTCTaGCCTGTCATGGTTCTAATCCTGGACTATCTTTTA +
Preference number: 3 (lower is better)
Translates to: VPNKPIISHIWF*PVMVLILDYLL
Trigger: TAAAAGATAGTCCAGGATTAGAACCATGACAGGGCAGAACCAGATGTGAGAAATGATTGGTTTGTTTGGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR TCA 72 bp AACAGGCAACCAGTGCTGCCATGTCTATATATGTTTTaGCATCAGATGAAAGGAGAGAGAATCCCCATAAAA +
Preference number: 3 (lower is better)
Translates to: NRQPVLPCLYMF*HQMKGERIPIK
Trigger: TTTTATGGGGATTCTCTCTCCTTTCATCTGATGTCAAAACATATATAGACATGGCAGCACTGGTTGCCTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR GCA 90 bp CTCCGAGTCGGAGGAATCAGACCCGCTGTGCGTGTGGCCGGGCGGCATGGCGAAGGGTCCCTGCGGGGCTaGTGGCCTTGCCGTCCGGGA +
Preference number: 4 (lower is better)
Translates to: LRVGGIRPAVRVAGRHGEGSLRG*WPCRPG
Trigger: TCCCGGACGGCAAGGCCAGCAGCCCCGCAGGGACCC...TTCGCCATGCCGCCCGGCCACACGCACAGCGGGTCTGATTCCTCCGACTCGGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR GCA 90 bp ACACACGCACGCACGCACACACACACACACACACCCAGCAGCCACAAGCGGCTCTGCTCCCGCGGTGGCTaGTGCTGGCGGTGGCGGCTC +
Preference number: 4 (lower is better)
Translates to: THARTHTHTHTPSSHKRLCSRGG*CWRWRL
Trigger: GAGCCGCCACCGCCAGCAGCAGCCACCGCGGGAGCA...GAGCCGCTTGTGGCTGCTGGGTGTGTGTGTGTGTGTGTGCGTGCGTGCGTGTGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331920.11
CDS-3UTR CCA 90 bp CTCCGAGTCGGAGGAATCAGACCCGCTGTGCGTGTGGCCGGGCGGCATGGCGAAAGTCTCAGGGTAGCCTaGGCAGAGTCCCCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: LRVGGIRPAVRVAGRHGESLRVA*AESPSG
Trigger: CCCCGAGGGGGACTCTGCCCAGGCTACCCTGAGACT...TTCGCCATGCCGCCCGGCCACACGCACAGCGGGTCTGATTCCTCCGACTCGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CCA 90 bp TCCTTGTGGCGCTGCACCGACCCTCCGCAGGTTAGCAGTGGGGGAAGAGAGCAGAAAACCCCGGCGCGCTaGGCCGCCGGAGGCTTTCGG +
Preference number: 4 (lower is better)
Translates to: SLWRCTDPPQVSSGGREQKTPAR*AAGGFR
Trigger: CCGAAAGCCTCCGGCGGCCCAGCGCGCCGGGGTTTT...CTGCTCTCTTCCCCCACTGCTAACCTGCGGAGGGTCGGTGCAGCGCCACAAGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000430669.6
CDS-3UTR TCA 90 bp CTCCGAGTCGGAGGAATCAGACCCGCTGTGCGTGTGGCCGGGCGGCATGGCGAAGGGCATTGTGCTGGGTaGGGGCACTCCACAATGGCG +
Preference number: 4 (lower is better)
Translates to: LRVGGIRPAVRVAGRHGEGHCAG*GHSTMA
Trigger: CGCCATTGTGGAGTGCCCTCACCCAGCACAATGCCC...TTCGCCATGCCGCCCGGCCACACGCACAGCGGGTCTGATTCCTCCGACTCGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR GCA 90 bp CTCCGAGTCGGAGGAATCAGACCCGCTGTGCGTGTGGCCGGGCGGCATGGCGAACGCTGGGATTCCAGCTaGCAGGTTTCCAGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: LRVGGIRPAVRVAGRHGERWDSS*QVSSWG
Trigger: CCCCCAGCTGGAAACCTGGCAGCTGGAATCCCAGCG...TTCGCCATGCCGCCCGGCCACACGCACAGCGGGTCTGATTCCTCCGACTCGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CCA 90 bp ACACACGCACGCACGCACACACACACACACACACCCAGCAGCCACAAGCGGCTCCGAAGCGGACCACGCTaGGGGGTGGCTCAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: THARTHTHTHTPSSHKRLRSGPR*GVAQGR
Trigger: CCTCCCCTGAGCCACCCCCCAGCGTGGTCCGCTTCG...GAGCCGCTTGTGGCTGCTGGGTGTGTGTGTGTGTGTGTGCGTGCGTGCGTGTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp TCCTTGTGGCGCTGCACCGACCCTCCGCAGGTTAGCAGTGGGGGAAGAGAGCAGCTGGATCGGCCGGATTaGGGCAGGGGCGGTCCATGT +
Preference number: 4 (lower is better)
Translates to: SLWRCTDPPQVSSGGREQLDRPD*GRGGPC
Trigger: ACATGGACCGCCCCTGCCTCAATCCGGCCGATCCAG...CTGCTCTCTTCCCCCACTGCTAACCTGCGGAGGGTCGGTGCAGCGCCACAAGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430669.6
CDS-3UTR TCA 90 bp CGGGGTTTTCTGTGGCTTCCACGATCACTTGGTGGGCAGGGCCTCCCGCGCCCTCGACGGGGTCGTTGCTaGCCCAAGCCGTCAGGTAGA +
Preference number: 4 (lower is better)
Translates to: RGFLWLPRSLGGQGLPRPRRGRC*PKPSGR
Trigger: TCTACCTGACGGCTTGGGTCAGCAACGACCCCGTCG...AGGGCGCGGGAGGCCCTGCCCACCAAGTGATCGTGGAAGCCACAGAAAACCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR TCA 90 bp GGCTCAGGGGAGGGTGTGGGCAGGCGGTTCAAGCCGTTGGCTGGAGACACCTCAAAGCCGTCACAGTGGTaGTGGGCTGGCAGTAGCCGG +
Preference number: 4 (lower is better)
Translates to: GSGEGVGRRFKPLAGDTSKPSQW*WAGSSR
Trigger: CCGGCTACTGCCAGCCCATCACCACTGTGACGGCTT...TGAGGTGTCTCCAGCCAACGGCTTGAACCGCCTGCCCACACCCTCCCCTGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR TCA 90 bp CGGGGTTTTCTGTGGCTTCCACGATCACTTGGTGGGCAGGGCCTCCCGCGCCCTGGGAACAACCCCGGCTaGGAGGAGAGCGCTGGGATT +
Preference number: 4 (lower is better)
Translates to: RGFLWLPRSLGGQGLPRPGNNPG*EESAGI
Trigger: AATCCCAGCGCTCTCCTCTCAGCCGGGGTTGTTCCC...AGGGCGCGGGAGGCCCTGCCCACCAAGTGATCGTGGAAGCCACAGAAAACCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CCA 90 bp CGGGGTTTTCTGTGGCTTCCACGATCACTTGGTGGGCAGGGCCTCCCGCGCCCTTGTGGCGGGGCAGTCTaGATCGGCCGGATTGAGGCA +
Preference number: 4 (lower is better)
Translates to: RGFLWLPRSLGGQGLPRPCGGAV*IGRIEA
Trigger: TGCCTCAATCCGGCCGATCCAGACTGCCCCGCCACA...AGGGCGCGGGAGGCCCTGCCCACCAAGTGATCGTGGAAGCCACAGAAAACCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CCA 90 bp CTCCGAGTCGGAGGAATCAGACCCGCTGTGCGTGTGGCCGGGCGGCATGGCGAAGGAAGGGGTAGCCGTTaGGGTAACTGGACAGCCCCA +
Preference number: 4 (lower is better)
Translates to: LRVGGIRPAVRVAGRHGEGRGSR*GNWTAP
Trigger: TGGGGCTGTCCAGTTACCCCAACGGCTACCCCTTCC...TTCGCCATGCCGCCCGGCCACACGCACAGCGGGTCTGATTCCTCCGACTCGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CCA 90 bp CGGGGTTTTCTGTGGCTTCCACGATCACTTGGTGGGCAGGGCCTCCCGCGCCCTGCACTCCCAGCAGAGTaGACACGGCGCCATCCAGGA +
Preference number: 4 (lower is better)
Translates to: RGFLWLPRSLGGQGLPRPALPAE*TRRHPG
Trigger: TCCTGGATGGCGCCGTGTCCACTCTGCTGGGAGTGC...AGGGCGCGGGAGGCCCTGCCCACCAAGTGATCGTGGAAGCCACAGAAAACCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CCA 90 bp GGGGCTGCTTGTGACCTCTCCCTTCATCTGGGGGCTGGTTACACGGATGCGTTCTGTGGCCGGGCGGCATaGCGAAGCGGACCACGCTGG +
Preference number: 4 (lower is better)
Translates to: GAACDLSLHLGAGYTDAFCGRAA*RSGPRW
Trigger: CCAGCGTGGTCCGCTTCGCCATGCCGCCCGGCCACA...GAACGCATCCGTGTAACCAGCCCCCAGATGAAGGGAGAGGTCACAAGCAGCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430669.6
CDS-3UTR CCA 90 bp GGGGCTGCTTGTGACCTCTCCCTTCATCTGGGGGCTGGTTACACGGATGCGTTCGACCCGCTGTGCGTGTaGCCGGGCGGCATGGCGAAG +
Preference number: 4 (lower is better)
Translates to: GAACDLSLHLGAGYTDAFDPLCV*PGGMAK
Trigger: CTTCGCCATGCCGCCCGGCCACACGCACAGCGGGTC...GAACGCATCCGTGTAACCAGCCCCCAGATGAAGGGAGAGGTCACAAGCAGCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430669.6
CDS-3UTR CCA 90 bp TCCTTGTGGCGCTGCACCGACCCTCCGCAGGTTAGCAGTGGGGGAAGAGAGCAGGCTTCCACGATCACTTaGTGGGCAGGGCCTCCCGCG +
Preference number: 4 (lower is better)
Translates to: SLWRCTDPPQVSSGGREQASTIT*WAGPPA
Trigger: CGCGGGAGGCCCTGCCCACCAAGTGATCGTGGAAGC...CTGCTCTCTTCCCCCACTGCTAACCTGCGGAGGGTCGGTGCAGCGCCACAAGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430669.6
CDS-3UTR TCA 90 bp TCCTTGTGGCGCTGCACCGACCCTCCGCAGGTTAGCAGTGGGGGAAGAGAGCAGCGACGGGGTCGTTGCTaGCCCAAGCCGTCAGGTAGA +
Preference number: 4 (lower is better)
Translates to: SLWRCTDPPQVSSGGREQRRGRC*PKPSGR
Trigger: TCTACCTGACGGCTTGGGTCAGCAACGACCCCGTCG...CTGCTCTCTTCCCCCACTGCTAACCTGCGGAGGGTCGGTGCAGCGCCACAAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430669.6
CDS-3UTR GCA 90 bp TGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCCACCGATACAGCCGCTaGCGCCGCCGCCGCGGTCCT +
Preference number: 4 (lower is better)
Translates to: WPSQGSALGMSPNSLTPTHRYSR*RRRRGP
Trigger: AGGACCGCGGCGGCGGCGGCAGCGGCTGTATCGGTG...GGTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331920.11
CDS-3UTR GCA 90 bp TCAGATCCCGCCAGCATCAGCACTCCCAGCAGAGTGGACACGGCGCCATCCAGGGTCACGGTGACGGGCTaGACAGAGATCTCGGAGCGC +
Preference number: 4 (lower is better)
Translates to: SDPASISTPSRVDTAPSRVTVTG*TEISER
Trigger: GCGCTCCGAGATCTCTGTGCAGCCCGTCACCGTGAC...CCTGGATGGCGCCGTGTCCACTCTGCTGGGAGTGCTGATGCTGGCGGGATCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR GCA 90 bp TGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCCGGGGCTGCTGGCCTTaGCGTCCGGGAGGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: WPSQGSALGMSPNSLTPTRGCWP*RPGGRD
Trigger: GTCCCTGCCTCCCGGACGGCAAGGCCAGCAGCCCCG...GGTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp TGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCGGGTCCCTGCGGGGCTaGTGGCCTTGCCGTCCGGGA +
Preference number: 4 (lower is better)
Translates to: WPSQGSALGMSPNSLTPTGSLRG*WPCRPG
Trigger: TCCCGGACGGCAAGGCCAGCAGCCCCGCAGGGACCC...GGTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp GGGGCTGCTTGTGACCTCTCCCTTCATCTGGGGGCTGGTTACACGGATGCGTTCAGCCGGGCACGGAGCTaGCCATGGCAGTGGACGCTG +
Preference number: 4 (lower is better)
Translates to: GAACDLSLHLGAGYTDAFSRARS*PWQWTL
Trigger: CAGCGTCCACTGCCATGGGCAGCTCCGTGCCCGGCT...GAACGCATCCGTGTAACCAGCCCCCAGATGAAGGGAGAGGTCACAAGCAGCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430669.6
CDS-3UTR CCA 90 bp TCAGATCCCGCCAGCATCAGCACTCCCAGCAGAGTGGACACGGCGCCATCCAGGGGTGTGGCCGGATGTTaGCCTGGGAGGCAGCATACG +
Preference number: 4 (lower is better)
Translates to: SDPASISTPSRVDTAPSRGVAGC*PGRQHT
Trigger: CGTATGCTGCCTCCCAGGCCAACATCCGGCCACACC...CCTGGATGGCGCCGTGTCCACTCTGCTGGGAGTGCTGATGCTGGCGGGATCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CCA 90 bp CGGGGTTTTCTGTGGCTTCCACGATCACTTGGTGGGCAGGGCCTCCCGCGCCCTTGCCTGGATTCGGGATaGACCACAGTGGAGTGGGCG +
Preference number: 4 (lower is better)
Translates to: RGFLWLPRSLGGQGLPRPCLDSG*TTVEWA
Trigger: CGCCCACTCCACTGTGGTCCATCCCGAATCCAGGCA...AGGGCGCGGGAGGCCCTGCCCACCAAGTGATCGTGGAAGCCACAGAAAACCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CCA 90 bp ACACACGCACGCACGCACACACACACACACACACCCAGCAGCCACAAGCGGCTCGCACGGAGCTGCCCATaGCAGTGGACGCTGGGTTCC +
Preference number: 4 (lower is better)
Translates to: THARTHTHTHTPSSHKRLARSCP*QWTLGS
Trigger: GGAACCCAGCGTCCACTGCCATGGGCAGCTCCGTGC...GAGCCGCTTGTGGCTGCTGGGTGTGTGTGTGTGTGTGTGCGTGCGTGCGTGTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp ACACACGCACGCACGCACACACACACACACACACCCAGCAGCCACAAGCGGCTCCGGCGCAACACGAGCTaGGCTCAGGAAGGGAGCGAG +
Preference number: 4 (lower is better)
Translates to: THARTHTHTHTPSSHKRLRRNTS*AQEGSE
Trigger: CTCGCTCCCTTCCTGAGCCCAGCTCGTGTTGCGCCG...GAGCCGCTTGTGGCTGCTGGGTGTGTGTGTGTGTGTGTGCGTGCGTGCGTGTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp GAAGGCGGCCTCCATGATGCCAAATTGCCCAGTGGGCTATGCCACAGGCCAACCCGCGCTGTGACAGGGTaGATCGCGCCACCCTCCGTG +
Preference number: 4 (lower is better)
Translates to: EGGLHDAKLPSGLCHRPTRAVTG*IAPPSV
Trigger: CACGGAGGGTGGCGCGATCCACCCTGTCACAGCGCG...GGTTGGCCTGTGGCATAGCCCACTGGGCAATTTGGCATCATGGAGGCCGCCTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR TCA 90 bp ACACACGCACGCACGCACACACACACACACACACCCAGCAGCCACAAGCGGCTCCGACGGGGTCGTTGCTaGCCCAAGCCGTCAGGTAGA +
Preference number: 4 (lower is better)
Translates to: THARTHTHTHTPSSHKRLRRGRC*PKPSGR
Trigger: TCTACCTGACGGCTTGGGTCAGCAACGACCCCGTCG...GAGCCGCTTGTGGCTGCTGGGTGTGTGTGTGTGTGTGTGCGTGCGTGCGTGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp ACACACGCACGCACGCACACACACACACACACACCCAGCAGCCACAAGCGGCTCAAGCCGTCACAGTGGTaGTGGGCTGGCAGTAGCCGG +
Preference number: 4 (lower is better)
Translates to: THARTHTHTHTPSSHKRLKPSQW*WAGSSR
Trigger: CCGGCTACTGCCAGCCCATCACCACTGTGACGGCTT...GAGCCGCTTGTGGCTGCTGGGTGTGTGTGTGTGTGTGTGCGTGCGTGCGTGTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp GGCTCAGGGGAGGGTGTGGGCAGGCGGTTCAAGCCGTTGGCTGGAGACACCTCACCCTCCTGTAACTCATaGGACCCCAGCACACCTTGC +
Preference number: 4 (lower is better)
Translates to: GSGEGVGRRFKPLAGDTSPSCNS*DPSTPC
Trigger: GCAAGGTGTGCTGGGGTCTCATGAGTTACAGGAGGG...TGAGGTGTCTCCAGCCAACGGCTTGAACCGCCTGCCCACACCCTCCCCTGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR TCA 90 bp TGCCTGGATTCGGGATGGACCACAGTGGAGTGGGCGAAGACGGGGTTTTCTGTGCGGGAACACGCGCTGTaGCAGGGTGGATCGCGCCAC +
Preference number: 4 (lower is better)
Translates to: CLDSGWTTVEWAKTGFSVREHAL*QGGSRH
Trigger: GTGGCGCGATCCACCCTGTCACAGCGCGTGTTCCCG...CACAGAAAACCCCGTCTTCGCCCACTCCACTGTGGTCCATCCCGAATCCAGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR GCA 90 bp TGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCCAGACCAGCCGCTGCTaGTGCTCACACGGCGGGCGC +
Preference number: 4 (lower is better)
Translates to: WPSQGSALGMSPNSLTPTQTSRC*CSHGGR
Trigger: GCGCCCGCCGTGTGAGCAGCAGCAGCGGCTGGTCTG...GGTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331920.11
CDS-3UTR GCA 90 bp TGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCGGCTTGCGAGGACGCTaGTGGCCGCAGGCTGCTCGG +
Preference number: 4 (lower is better)
Translates to: WPSQGSALGMSPNSLTPTGLRGR*WPQAAR
Trigger: CCGAGCAGCCTGCGGCCAGCAGCGTCCTCGCAAGCC...GGTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331920.11
CDS-3UTR GCA 90 bp ACACACGCACGCACGCACACACACACACACACACCCAGCAGCCACAAGCGGCTCGGGGGTCGTACTCCGTaGGGAGCTGGACAGTGGACT +
Preference number: 4 (lower is better)
Translates to: THARTHTHTHTPSSHKRLGGRTP*GAGQWT
Trigger: AGTCCACTGTCCAGCTCCGCACGGAGTACGACCCCC...GAGCCGCTTGTGGCTGCTGGGTGTGTGTGTGTGTGTGTGCGTGCGTGCGTGTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp ACACACGCACGCACGCACACACACACACACACACCCAGCAGCCACAAGCGGCTCGGGCAAGCACAGCCCTaGGGTTCTTGTCGCCGATGG +
Preference number: 4 (lower is better)
Translates to: THARTHTHTHTPSSHKRLGQAQP*GSCRRW
Trigger: CCATCGGCGACAAGAACCGCAGGGCTGTGCTTGCCC...GAGCCGCTTGTGGCTGCTGGGTGTGTGTGTGTGTGTGTGCGTGCGTGCGTGTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp ATGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACGGGTCCCTGCGGGGCTaGTGGCCTTGCCGTCCGGGA +
Preference number: 4 (lower is better)
Translates to: MAQPRLSTRHVTEFSNTHGSLRG*WPCRPG
Trigger: TCCCGGACGGCAAGGCCAGCAGCCCCGCAGGGACCC...GTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp ATGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCAGGCCGGCGCAGGCTaGTCCCCGGCGCGGCATTTC +
Preference number: 4 (lower is better)
Translates to: MAQPRLSTRHVTEFSNTHQAGAG*SPARHF
Trigger: GAAATGCCGCGCCGGGGAGCAGCCTGCGCCGGCCTG...GTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429896.6
CDS-3UTR CCA 90 bp TGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCGGGCTGCTCGGGCTCTaGCTGCTGGGTTCGCGGTGG +
Preference number: 4 (lower is better)
Translates to: WPSQGSALGMSPNSLTPTGLLGL*LLGSRW
Trigger: CCACCGCGAACCCAGCAGCCAGAGCCCGAGCAGCCC...GGTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331920.11
CDS-3UTR CCA 90 bp ACACACGCACGCACGCACACACACACACACACACCCAGCAGCCACAAGCGGCTCTGGACACGGCTGGCCTaGAGTGCCGAGTCCAGGTGT +
Preference number: 4 (lower is better)
Translates to: THARTHTHTHTPSSHKRLWTRLA*SAESRC
Trigger: ACACCTGGACTCGGCACTCCAGGCCAGCCGTGTCCA...GAGCCGCTTGTGGCTGCTGGGTGTGTGTGTGTGTGTGTGCGTGCGTGCGTGTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp ACACACGCACGCACGCACACACACACACACACACCCAGCAGCCACAAGCGGCTCTGTGGCGGGGCAGTCTaGATCGGCCGGATTGAGGCA +
Preference number: 4 (lower is better)
Translates to: THARTHTHTHTPSSHKRLCGGAV*IGRIEA
Trigger: TGCCTCAATCCGGCCGATCCAGACTGCCCCGCCACA...GAGCCGCTTGTGGCTGCTGGGTGTGTGTGTGTGTGTGTGCGTGCGTGCGTGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp TCCTTGTGGCGCTGCACCGACCCTCCGCAGGTTAGCAGTGGGGGAAGAGAGCAGAGAGCAGGTCCCTTGTaGAGCTGGTGCTCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: SLWRCTDPPQVSSGGREQRAGPL*SWCSLG
Trigger: GCCCAGAGAGCACCAGCTCCACAAGGGACCTGCTCT...CTGCTCTCTTCCCCCACTGCTAACCTGCGGAGGGTCGGTGCAGCGCCACAAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430669.6
CDS-3UTR CCA 90 bp GAAGGCGGCCTCCATGATGCCAAATTGCCCAGTGGGCTATGCCACAGGCCAACCGGCCGGATGTTGGCCTaGGAGGCAGCATACGCGACG +
Preference number: 4 (lower is better)
Translates to: EGGLHDAKLPSGLCHRPTGRMLA*EAAYAT
Trigger: CGTCGCGTATGCTGCCTCCCAGGCCAACATCCGGCC...GGTTGGCCTGTGGCATAGCCCACTGGGCAATTTGGCATCATGGAGGCCGCCTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CCA 90 bp ACACACGCACGCACGCACACACACACACACACACCCAGCAGCCACAAGCGGCTCGGTGTGGCCGGATGTTaGCCTGGGAGGCAGCATACG +
Preference number: 4 (lower is better)
Translates to: THARTHTHTHTPSSHKRLGVAGC*PGRQHT
Trigger: CGTATGCTGCCTCCCAGGCCAACATCCGGCCACACC...GAGCCGCTTGTGGCTGCTGGGTGTGTGTGTGTGTGTGTGCGTGCGTGCGTGTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp TCCTTGTGGCGCTGCACCGACCCTCCGCAGGTTAGCAGTGGGGGAAGAGAGCAGCCATTCTGGTCGGTGTaGCCGGATGTTGGCCTGGGA +
Preference number: 4 (lower is better)
Translates to: SLWRCTDPPQVSSGGREQPFWSV*PDVGLG
Trigger: TCCCAGGCCAACATCCGGCCACACCGACCAGAATGG...CTGCTCTCTTCCCCCACTGCTAACCTGCGGAGGGTCGGTGCAGCGCCACAAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430669.6
CDS-3UTR CCA 90 bp GGCTCAGGGGAGGGTGTGGGCAGGCGGTTCAAGCCGTTGGCTGGAGACACCTCAACTGGGCATACTCGATaGGCTCTGCTGCCGGGATTC +
Preference number: 4 (lower is better)
Translates to: GSGEGVGRRFKPLAGDTSTGHTR*ALLPGF
Trigger: GAATCCCGGCAGCAGAGCCCATCGAGTATGCCCAGT...TGAGGTGTCTCCAGCCAACGGCTTGAACCGCCTGCCCACACCCTCCCCTGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CCA 90 bp TCCTTGTGGCGCTGCACCGACCCTCCGCAGGTTAGCAGTGGGGGAAGAGAGCAGAACAGCAGCAGCCAGTaGCGGAGGCCGATGTACTGC +
Preference number: 4 (lower is better)
Translates to: SLWRCTDPPQVSSGGREQNSSSQ*RRPMYC
Trigger: GCAGTACATCGGCCTCCGCCACTGGCTGCTGCTGTT...CTGCTCTCTTCCCCCACTGCTAACCTGCGGAGGGTCGGTGCAGCGCCACAAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430669.6
CDS-3UTR CCA 90 bp ACACACGCACGCACGCACACACACACACACACACCCAGCAGCCACAAGCGGCTCGCACTCCCAGCAGAGTaGACACGGCGCCATCCAGGA +
Preference number: 4 (lower is better)
Translates to: THARTHTHTHTPSSHKRLALPAE*TRRHPG
Trigger: TCCTGGATGGCGCCGTGTCCACTCTGCTGGGAGTGC...GAGCCGCTTGTGGCTGCTGGGTGTGTGTGTGTGTGTGTGCGTGCGTGCGTGTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp TGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCCGAAGCGGACCACGCTaGGGGGTGGCTCAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: WPSQGSALGMSPNSLTPTRSGPR*GVAQGR
Trigger: CCTCCCCTGAGCCACCCCCCAGCGTGGTCCGCTTCG...GGTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp TCGGGGATGCCGAGAACCCCAGGAGAACCTTGTCCTCCTCTTTGCCTGGCTCTATCCACGATCACTTGGTaGGCAGGGCCTCCCGCGCCC +
Preference number: 4 (lower is better)
Translates to: SGMPRTPGEPCPPLCLALSTITW*AGPPAP
Trigger: GGGCGCGGGAGGCCCTGCCCACCAAGTGATCGTGGA...TAGAGCCAGGCAAAGAGGAGGACAAGGTTCTCCTGGGGTTCTCGGCATCCCCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430669.6
CDS-3UTR CCA 90 bp CTCCGAGTCGGAGGAATCAGACCCGCTGTGCGTGTGGCCGGGCGGCATGGCGAATGGACCACAGTGGAGTaGGCGAAGACGGGGTTTTCT +
Preference number: 4 (lower is better)
Translates to: LRVGGIRPAVRVAGRHGEWTTVE*AKTGFS
Trigger: AGAAAACCCCGTCTTCGCCCACTCCACTGTGGTCCA...TTCGCCATGCCGCCCGGCCACACGCACAGCGGGTCTGATTCCTCCGACTCGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CCA 90 bp ATGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACTCCCTGCGGGGCTGCTaGCCTTGCCGTCCGGGAGGC +
Preference number: 4 (lower is better)
Translates to: MAQPRLSTRHVTEFSNTHSLRGC*PCRPGG
Trigger: GCCTCCCGGACGGCAAGGCCAGCAGCCCCGCAGGGA...GTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp ACACACGCACGCACGCACACACACACACACACACCCAGCAGCCACAAGCGGCTCAGCTGCCCATGGCAGTaGACGCTGGGTTCCGAGGGT +
Preference number: 4 (lower is better)
Translates to: THARTHTHTHTPSSHKRLSCPWQ*TLGSEG
Trigger: ACCCTCGGAACCCAGCGTCCACTGCCATGGGCAGCT...GAGCCGCTTGTGGCTGCTGGGTGTGTGTGTGTGTGTGTGCGTGCGTGCGTGTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp ACACACGCACGCACGCACACACACACACACACACCCAGCAGCCACAAGCGGCTCCTCTCACACCGGACGTaGAAAGGCACGTGGGGGTCC +
Preference number: 4 (lower is better)
Translates to: THARTHTHTHTPSSHKRLLSHRT*KGTWGS
Trigger: GGACCCCCACGTGCCTTTCCACGTCCGGTGTGAGAG...GAGCCGCTTGTGGCTGCTGGGTGTGTGTGTGTGTGTGTGCGTGCGTGCGTGTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp CTCCGAGTCGGAGGAATCAGACCCGCTGTGCGTGTGGCCGGGCGGCATGGCGAAGGGTCGTGTGTGTGTTaGTCAGAAGAGGGGCACCAT +
Preference number: 4 (lower is better)
Translates to: LRVGGIRPAVRVAGRHGEGSCVC*SEEGHH
Trigger: ATGGTGCCCCTCTTCTGACCAACACACACACGACCC...TTCGCCATGCCGCCCGGCCACACGCACAGCGGGTCTGATTCCTCCGACTCGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR TCA 90 bp ATGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACGGCTCGGGCTCCGGTTaGCAGACCAGCCGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: MAQPRLSTRHVTEFSNTHGSGSG*QTSRCC
Trigger: GCAGCAGCGGCTGGTCTGTCAACCGGAGCCCGAGCC...GTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331920.11
CDS-3UTR TCA 90 bp ACACACGCACGCACGCACACACACACACACACACCCAGCAGCCACAAGCGGCTCCAGTCCTGCAGCCACTaGCAGTGCAACCAGCAGGAC +
Preference number: 4 (lower is better)
Translates to: THARTHTHTHTPSSHKRLQSCSH*QCNQQD
Trigger: GTCCTGCTGGTTGCACTGTCAGTGGCTGCAGGACTG...GAGCCGCTTGTGGCTGCTGGGTGTGTGTGTGTGTGTGTGCGTGCGTGCGTGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp GAAGGCGGCCTCCATGATGCCAAATTGCCCAGTGGGCTATGCCACAGGCCAACCGCCGAAGCTCCTCGCTaGGGCCTGACACTGTCGTCT +
Preference number: 4 (lower is better)
Translates to: EGGLHDAKLPSGLCHRPTAEAPR*GLTLSS
Trigger: AGACGACAGTGTCAGGCCTCAGCGAGGAGCTTCGGC...GGTTGGCCTGTGGCATAGCCCACTGGGCAATTTGGCATCATGGAGGCCGCCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR TCA 90 bp ACACGCACAGCCAAACAAGAGGACCGCACACAACGACACCTAGAGAAGCCACCAGGGTTCCGAGGGTTGTaGGAACGGGCCCCGCGAGGG +
Preference number: 4 (lower is better)
Translates to: TRTAKQEDRTQRHLEKPPGFRGL*ERAPRG
Trigger: CCCTCGCGGGGCCCGTTCTCACAACCCTCGGAACCC...TGGTGGCTTCTCTAGGTGTCGTTGTGTGCGGTCCTCTTGTTTGGCTGTGCGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp ACACACGCACGCACGCACACACACACACACACACCCAGCAGCCACAAGCGGCTCGGCAGACCATGTGGGTaGCAGGCACCAAGACAGCAG +
Preference number: 4 (lower is better)
Translates to: THARTHTHTHTPSSHKRLGRPCG*QAPRQQ
Trigger: CTGCTGTCTTGGTGCCTGTCACCCACATGGTCTGCC...GAGCCGCTTGTGGCTGCTGGGTGTGTGTGTGTGTGTGTGCGTGCGTGCGTGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp TGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCTCCGCTCTGTGTGTGTaGAGCGGGCAGCGGCCGCAG +
Preference number: 4 (lower is better)
Translates to: WPSQGSALGMSPNSLTPTSALCV*SGQRPQ
Trigger: CTGCGGCCGCTGCCCGCTGCACACACACAGAGCGGA...GGTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331920.11
CDS-3UTR GCA 90 bp TGGGGTCCTGGATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAAGCCGCAGCTGCCGCTaGTCCCGCGGTGGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: WGPGWQPMIIRDAVDTRRSRSCR*SRGGCC
Trigger: GCAGCAGCCACCGCGGGAGCAGCGGCAGCTGCGGCT...TCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCATCCAGGACCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331920.11
CDS-3UTR GCA 90 bp ATGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACGGGTCCCGAGGTCTCTaGGGCCGCCGCTGCCCACAT +
Preference number: 4 (lower is better)
Translates to: MAQPRLSTRHVTEFSNTHGSRGL*GRRCPH
Trigger: ATGTGGGCAGCGGCGGCCGCAGAGACCTCGGGACCC...GTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331920.11
CDS-3UTR GCA 90 bp TGGGGTCCTGGATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGACTGCTGGCCGCAGGCTaGTCGGGCTCGGGCTCCGGT +
Preference number: 4 (lower is better)
Translates to: WGPGWQPMIIRDAVDTRRLLAAG*SGSGSG
Trigger: ACCGGAGCCCGAGCCCGAGCAGCCTGCGGCCAGCAG...TCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCATCCAGGACCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331920.11
CDS-3UTR GCA 90 bp ACACACGCACGCACGCACACACACACACACACACCCAGCAGCCACAAGCGGCTCGGCCTCCAGGATGGCTaGCGCTTTGTCCTCGTTCCA +
Preference number: 4 (lower is better)
Translates to: THARTHTHTHTPSSHKRLGLQDG*RFVLVP
Trigger: TGGAACGAGGACAAAGCGGCAGCCATCCTGGAGGCC...GAGCCGCTTGTGGCTGCTGGGTGTGTGTGTGTGTGTGTGCGTGCGTGCGTGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp TGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCCCACGCTGGCTCCTGTaGGCTTCAGGCACTCCCCGG +
Preference number: 4 (lower is better)
Translates to: WPSQGSALGMSPNSLTPTPRWLL*ASGTPR
Trigger: CCGGGGAGTGCCTGAAGCGCACAGGAGCCAGCGTGG...GGTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp ACTCTGCATGGCTGGAGGGCACAGACTCCACGCAGGGATGCGTTTCTGGAACTAGCGCCACCCTCCGTGTaGCCGACACAGCAGCATGGC +
Preference number: 4 (lower is better)
Translates to: TLHGWRAQTPRRDAFLELAPPSV*PTQQHG
Trigger: GCCATGCTGCTGTGTCGGGCACACGGAGGGTGGCGC...TAGTTCCAGAAACGCATCCCTGCGTGGAGTCTGTGCCCTCCAGCCATGCAGAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR GCA 90 bp TGGGGTCCTGGATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGATGCTCGGAGCGCGGGTaGCGATGGCGCGGACGCTGG +
Preference number: 4 (lower is better)
Translates to: WGPGWQPMIIRDAVDTRRCSERG*RWRGRW
Trigger: CCAGCGTCCGCGCCATCGGCACCCGCGCTCCGAGCA...TCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCATCCAGGACCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430669.6
CDS-3UTR CCA 90 bp ACACACGCACGCACGCACACACACACACACACACCCAGCAGCCACAAGCGGCTCACTACTACCGCTGCCTaGAGGGAGAACGCCCGCAGA +
Preference number: 4 (lower is better)
Translates to: THARTHTHTHTPSSHKRLTTTAA*RENARR
Trigger: TCTGCGGGCGTTCTCCCTCCAGGCAGCGGTAGTAGT...GAGCCGCTTGTGGCTGCTGGGTGTGTGTGTGTGTGTGTGCGTGCGTGCGTGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331920.11
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp ACACACGCACGCACGCACACACACACACACACACCCAGCAGCCACAAGCGGCTCAGCGCGGCTCAGCGGTaGTGTAGTACACGTGCGTGT +
Preference number: 4 (lower is better)
Translates to: THARTHTHTHTPSSHKRLSAAQR*CSTRAC
Trigger: ACACGCACGTGTACTACACCACCGCTGAGCCGCGCT...GAGCCGCTTGTGGCTGCTGGGTGTGTGTGTGTGTGTGTGCGTGCGTGCGTGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp ACACACGCACGCACGCACACACACACACACACACCCAGCAGCCACAAGCGGCTCCCATTCTGGTCGGTGTaGCCGGATGTTGGCCTGGGA +
Preference number: 4 (lower is better)
Translates to: THARTHTHTHTPSSHKRLPFWSV*PDVGLG
Trigger: TCCCAGGCCAACATCCGGCCACACCGACCAGAATGG...GAGCCGCTTGTGGCTGCTGGGTGTGTGTGTGTGTGTGTGCGTGCGTGCGTGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp ACACACGCACGCACGCACACACACACACACACACCCAGCAGCCACAAGCGGCTCGGAAGGGGTAGCCGTTaGGGTAACTGGACAGCCCCA +
Preference number: 4 (lower is better)
Translates to: THARTHTHTHTPSSHKRLGRGSR*GNWTAP
Trigger: TGGGGCTGTCCAGTTACCCCAACGGCTACCCCTTCC...GAGCCGCTTGTGGCTGCTGGGTGTGTGTGTGTGTGTGTGCGTGCGTGCGTGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp ATGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACTGTGGCCGGGCGGCATaGCGAAGCGGACCACGCTGG +
Preference number: 4 (lower is better)
Translates to: MAQPRLSTRHVTEFSNTHCGRAA*RSGPRW
Trigger: CCAGCGTGGTCCGCTTCGCCATGCCGCCCGGCCACA...GTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp ACTCTGCATGGCTGGAGGGCACAGACTCCACGCAGGGATGCGTTTCTGGAACTATCCACGATCACTTGGTaGGCAGGGCCTCCCGCGCCC +
Preference number: 4 (lower is better)
Translates to: TLHGWRAQTPRRDAFLELSTITW*AGPPAP
Trigger: GGGCGCGGGAGGCCCTGCCCACCAAGTGATCGTGGA...TAGTTCCAGAAACGCATCCCTGCGTGGAGTCTGTGCCCTCCAGCCATGCAGAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CCA 90 bp TCGGGGATGCCGAGAACCCCAGGAGAACCTTGTCCTCCTCTTTGCCTGGCTCTAAGTCTCAGGGTAGCCTaGGCAGAGTCCCCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: SGMPRTPGEPCPPLCLALSLRVA*AESPSG
Trigger: CCCCGAGGGGGACTCTGCCCAGGCTACCCTGAGACT...TAGAGCCAGGCAAAGAGGAGGACAAGGTTCTCCTGGGGTTCTCGGCATCCCCGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000430669.6
CDS-3UTR CCA 90 bp CGGGGTTTTCTGTGGCTTCCACGATCACTTGGTGGGCAGGGCCTCCCGCGCCCTTGCCAAATTGCCCAGTaGGCTATGCCACAGGCCAAC +
Preference number: 4 (lower is better)
Translates to: RGFLWLPRSLGGQGLPRPCQIAQ*AMPQAN
Trigger: GTTGGCCTGTGGCATAGCCCACTGGGCAATTTGGCA...AGGGCGCGGGAGGCCCTGCCCACCAAGTGATCGTGGAAGCCACAGAAAACCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CCA 90 bp TCAGATCCCGCCAGCATCAGCACTCCCAGCAGAGTGGACACGGCGCCATCCAGGTTGCAGGGAGGTAGCTaGAGATGCAGACCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: SDPASISTPSRVDTAPSRLQGGS*RCRPSP
Trigger: AGGGCTGGGTCTGCATCTCCAGCTACCTCCCTGCAA...CCTGGATGGCGCCGTGTCCACTCTGCTGGGAGTGCTGATGCTGGCGGGATCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CCA 90 bp GGCTCAGGGGAGGGTGTGGGCAGGCGGTTCAAGCCGTTGGCTGGAGACACCTCAATGCTGCCCATTCTGTaGGAGCTGGGGCATTGTGCT +
Preference number: 4 (lower is better)
Translates to: GSGEGVGRRFKPLAGDTSMLPIL*ELGHCA
Trigger: AGCACAATGCCCCAGCTCCCACAGAATGGGCAGCAT...TGAGGTGTCTCCAGCCAACGGCTTGAACCGCCTGCCCACACCCTCCCCTGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR TCA 90 bp ACACACGCACGCACGCACACACACACACACACACCCAGCAGCCACAAGCGGCTCTGTCCCGCAAGCCGTTaGGGTAGAAAGGGAACTGGG +
Preference number: 4 (lower is better)
Translates to: THARTHTHTHTPSSHKRLCPASR*GRKGTG
Trigger: CCCAGTTCCCTTTCTACCTCAACGGCTTGCGGGACA...GAGCCGCTTGTGGCTGCTGGGTGTGTGTGTGTGTGTGTGCGTGCGTGCGTGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp GAAGGCGGCCTCCATGATGCCAAATTGCCCAGTGGGCTATGCCACAGGCCAACCGGCAGACCATGTGGGTaGCAGGCACCAAGACAGCAG +
Preference number: 4 (lower is better)
Translates to: EGGLHDAKLPSGLCHRPTGRPCG*QAPRQQ
Trigger: CTGCTGTCTTGGTGCCTGTCACCCACATGGTCTGCC...GGTTGGCCTGTGGCATAGCCCACTGGGCAATTTGGCATCATGGAGGCCGCCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR GCA 90 bp ACACGCACAGCCAAACAAGAGGACCGCACACAACGACACCTAGAGAAGCCACCACTCTGCGGCCGCCGCTaGCCACATCCAGTTCGCGGA +
Preference number: 4 (lower is better)
Translates to: TRTAKQEDRTQRHLEKPPLCGRR*PHPVRG
Trigger: TCCGCGAACTGGATGTGGGCAGCGGCGGCCGCAGAG...TGGTGGCTTCTCTAGGTGTCGTTGTGTGCGGTCCTCTTGTTTGGCTGTGCGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331920.11
CDS-3UTR GCA 90 bp ACACACGCACGCACGCACACACACACACACACACCCAGCAGCCACAAGCGGCTCTTCCCCTTGGAAATCTaGTCCAGAGCGAAGGCGGCG +
Preference number: 4 (lower is better)
Translates to: THARTHTHTHTPSSHKRLFPLEI*SRAKAA
Trigger: CGCCGCCTTCGCTCTGGAGCAGATTTCCAAGGGGAA...GAGCCGCTTGTGGCTGCTGGGTGTGTGTGTGTGTGTGTGCGTGCGTGCGTGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331920.11
CDS-3UTR GCA 90 bp ACACACGCACGCACGCACACACACACACACACACCCAGCAGCCACAAGCGGCTCAACTGGAACATGGTCTaGAGGGCATGGGCGCTGACG +
Preference number: 4 (lower is better)
Translates to: THARTHTHTHTPSSHKRLNWNMV*RAWALT
Trigger: CGTCAGCGCCCATGCCCTGCAGACCATGTTCCAGTT...GAGCCGCTTGTGGCTGCTGGGTGTGTGTGTGTGTGTGTGCGTGCGTGCGTGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp ATGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCCACGCTGGCTCCTGTaGGCTTCAGGCACTCCCCGG +
Preference number: 4 (lower is better)
Translates to: MAQPRLSTRHVTEFSNTHPRWLL*ASGTPR
Trigger: CCGGGGAGTGCCTGAAGCGCACAGGAGCCAGCGTGG...GTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp ACACACGCACGCACGCACACACACACACACACACCCAGCAGCCACAAGCGGCTCTGGGCTTATCGCGGCTaGCGGTTTGCACCAGGAGTT +
Preference number: 4 (lower is better)
Translates to: THARTHTHTHTPSSHKRLWAYRG*RFAPGV
Trigger: AACTCCTGGTGCAAACCGGCAGCCGCGATAAGCCCA...GAGCCGCTTGTGGCTGCTGGGTGTGTGTGTGTGTGTGTGCGTGCGTGCGTGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp GGCCGCAGCACCATGGCAGAGGAGGAGAGTGCAGAAGTAGTTCTGCTTTCCCACGGGCAAGCACAGCCCTaGGGTTCTTGTCGCCGATGG +
Preference number: 4 (lower is better)
Translates to: GRSTMAEEESAEVVLLSHGQAQP*GSCRRW
Trigger: CCATCGGCGACAAGAACCGCAGGGCTGTGCTTGCCC...GTGGGAAAGCAGAACTACTTCTGCACTCTCCTCCTCTGCCATGGTGCTGCGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR GCA 90 bp ACACACGCACGCACGCACACACACACACACACACCCAGCAGCCACAAGCGGCTCACGGGTGCAAACATGTaGTCCAGGGCAAGCACAGCC +
Preference number: 4 (lower is better)
Translates to: THARTHTHTHTPSSHKRLTGANM*SRASTA
Trigger: GGCTGTGCTTGCCCTGGAGCACATGTTTGCACCCGT...GAGCCGCTTGTGGCTGCTGGGTGTGTGTGTGTGTGTGTGCGTGCGTGCGTGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp GACACTGTCGTCTGGGAACTATACTCCGAGTCGGAGGAATCAGACCCGCTGTGCGAATCAGACCCGCTGTaGGTGTGGCCGGGCGGCATG +
Preference number: 4 (lower is better)
Translates to: DTVVWELYSESEESDPLCESDPL*VWPGGM
Trigger: CATGCCGCCCGGCCACACGCACAGCGGGTCTGATTC...GCACAGCGGGTCTGATTCCTCCGACTCGGAGTATAGTTCCCAGACGACAGTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR GCA 90 bp CAGAGTTCTATCCAAGAGCAGGTCCCTCACAAAGCCATGGAGGCTGCTCAAAGACGGGGCTGCTGGCCTTaGCGTCCGGGAGGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: QSSIQEQVPHKAMEAAQRRGCWP*RPGGRD
Trigger: GTCCCTGCCTCCCGGACGGCAAGGCCAGCAGCCCCG...TCTTTGAGCAGCCTCCATGGCTTTGTGAGGGACCTGCTCTTGGATAGAACTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR GCA 90 bp ACACACGCACGCACGCACACACACACACACACACCCAGCAGCCACAAGCGGCTCTGGCACGGAGCCCAATaGACAAATACGGAGAGGCCC +
Preference number: 4 (lower is better)
Translates to: THARTHTHTHTPSSHKRLWHGAQ*TNTERP
Trigger: GGGCCTCTCCGTATTTGTGCATTGGGCTCCGTGCCA...GAGCCGCTTGTGGCTGCTGGGTGTGTGTGTGTGTGTGTGCGTGCGTGCGTGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp ACACACGCACGCACGCACACACACACACACACACCCAGCAGCCACAAGCGGCTCAAAGCACAAACACAATaGCGAGGGGCCCCGCTCGTG +
Preference number: 4 (lower is better)
Translates to: THARTHTHTHTPSSHKRLKAQTQ*RGAPLV
Trigger: CACGAGCGGGGCCCCTCGGCATTGTGTTTGTGCTTT...GAGCCGCTTGTGGCTGCTGGGTGTGTGTGTGTGTGTGTGCGTGCGTGCGTGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR GCA 90 bp TCCTTGTGGCGCTGCACCGACCCTCCGCAGGTTAGCAGTGGGGGAAGAGAGCAGTCTAGGTCCCTTGGCTaGCCTTGTCAGTGGCACTCA +
Preference number: 4 (lower is better)
Translates to: SLWRCTDPPQVSSGGREQSRSLG*PCQWHS
Trigger: TGAGTGCCACTGACAAGGGCAGCCAAGGGACCTAGA...CTGCTCTCTTCCCCCACTGCTAACCTGCGGAGGGTCGGTGCAGCGCCACAAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430669.6
CDS-3UTR CCA 90 bp TGGGGTCCTGGATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAGGCTGCTGCTGGCGGTaGCGGCTCCAGGAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: WGPGWQPMIIRDAVDTRRGCCWR*RLQELL
Trigger: CAGCAGCTCCTGGAGCCGCCACCGCCAGCAGCAGCC...TCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCATCCAGGACCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331920.11
CDS-3UTR CCA 90 bp ACACGCACAGCCAAACAAGAGGACCGCACACAACGACACCTAGAGAAGCCACCATTGCGAGGACGCTGCTaGCCGCAGGCTGCTCGGGCT +
Preference number: 4 (lower is better)
Translates to: TRTAKQEDRTQRHLEKPPLRGRC*PQAARA
Trigger: AGCCCGAGCAGCCTGCGGCCAGCAGCGTCCTCGCAA...TGGTGGCTTCTCTAGGTGTCGTTGTGTGCGGTCCTCTTGTTTGGCTGTGCGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331920.11
CDS-3UTR CCA 90 bp TCGGGGATGCCGAGAACCCCAGGAGAACCTTGTCCTCCTCTTTGCCTGGCTCTATGTGGCGGGGCAGTCTaGATCGGCCGGATTGAGGCA +
Preference number: 4 (lower is better)
Translates to: SGMPRTPGEPCPPLCLALCGGAV*IGRIEA
Trigger: TGCCTCAATCCGGCCGATCCAGACTGCCCCGCCACA...TAGAGCCAGGCAAAGAGGAGGACAAGGTTCTCCTGGGGTTCTCGGCATCCCCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000430669.6
CDS-3UTR CCA 90 bp ACACACGCACGCACGCACACACACACACACACACCCAGCAGCCACAAGCGGCTCCTGGAGTCGGAGAACTaGGAGAGCAGGTCCCTTGTG +
Preference number: 4 (lower is better)
Translates to: THARTHTHTHTPSSHKRLLESEN*ESRSLV
Trigger: CACAAGGGACCTGCTCTCCCAGTTCTCCGACTCCAG...GAGCCGCTTGTGGCTGCTGGGTGTGTGTGTGTGTGTGTGCGTGCGTGCGTGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp TCGGGGATGCCGAGAACCCCAGGAGAACCTTGTCCTCCTCTTTGCCTGGCTCTAGGTGTGGCCGGATGTTaGCCTGGGAGGCAGCATACG +
Preference number: 4 (lower is better)
Translates to: SGMPRTPGEPCPPLCLALGVAGC*PGRQHT
Trigger: CGTATGCTGCCTCCCAGGCCAACATCCGGCCACACC...TAGAGCCAGGCAAAGAGGAGGACAAGGTTCTCCTGGGGTTCTCGGCATCCCCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430669.6
CDS-3UTR CCA 90 bp ACACACGCACGCACGCACACACACACACACACACCCAGCAGCCACAAGCGGCTCGGCGGTTCAAGCCGTTaGCTGGAGACACCTCAGGAT +
Preference number: 4 (lower is better)
Translates to: THARTHTHTHTPSSHKRLGGSSR*LETPQD
Trigger: ATCCTGAGGTGTCTCCAGCCAACGGCTTGAACCGCC...GAGCCGCTTGTGGCTGCTGGGTGTGTGTGTGTGTGTGTGCGTGCGTGCGTGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp TGGGGTCCTGGATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGATGTGGCCGGGCGGCATaGCGAAGCGGACCACGCTGG +
Preference number: 4 (lower is better)
Translates to: WGPGWQPMIIRDAVDTRRCGRAA*RSGPRW
Trigger: CCAGCGTGGTCCGCTTCGCCATGCCGCCCGGCCACA...TCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCATCCAGGACCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp ACACGCACAGCCAAACAAGAGGACCGCACACAACGACACCTAGAGAAGCCACCATCCACGATCACTTGGTaGGCAGGGCCTCCCGCGCCC +
Preference number: 4 (lower is better)
Translates to: TRTAKQEDRTQRHLEKPPSTITW*AGPPAP
Trigger: GGGCGCGGGAGGCCCTGCCCACCAAGTGATCGTGGA...TGGTGGCTTCTCTAGGTGTCGTTGTGTGCGGTCCTCTTGTTTGGCTGTGCGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp TGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCGCTTCCACGATCACTTaGTGGGCAGGGCCTCCCGCG +
Preference number: 4 (lower is better)
Translates to: WPSQGSALGMSPNSLTPTASTIT*WAGPPA
Trigger: CGCGGGAGGCCCTGCCCACCAAGTGATCGTGGAAGC...GGTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp ACACACGCACGCACGCACACACACACACACACACCCAGCAGCCACAAGCGGCTCAGGGTGGGTGATGCCTaGATTCGGGATGGACCACAG +
Preference number: 4 (lower is better)
Translates to: THARTHTHTHTPSSHKRLRVGDA*IRDGPQ
Trigger: CTGTGGTCCATCCCGAATCCAGGCATCACCCACCCT...GAGCCGCTTGTGGCTGCTGGGTGTGTGTGTGTGTGTGTGCGTGCGTGCGTGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp ATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATTGGGGTCCTGGATGGCATCCCTGCGGGGCTGCTaGCCTTGCCGTCCGGGAGGC +
Preference number: 4 (lower is better)
Translates to: IREKEIIPLKHKLGSWMASLRGC*PCRPGG
Trigger: GCCTCCCGGACGGCAAGGCCAGCAGCCCCGCAGGGA...TGCCATCCAGGACCCCAATTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp TGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCGCACGGAGCTGCCCATaGCAGTGGACGCTGGGTTCC +
Preference number: 4 (lower is better)
Translates to: WPSQGSALGMSPNSLTPTARSCP*QWTLGS
Trigger: GGAACCCAGCGTCCACTGCCATGGGCAGCTCCGTGC...GGTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp ACACACGCACGCACGCACACACACACACACACACCCAGCAGCCACAAGCGGCTCTGGTGTGGATTTGGATaGGGAGCCGACACTGGGTGC +
Preference number: 4 (lower is better)
Translates to: THARTHTHTHTPSSHKRLWCGFG*GADTGC
Trigger: GCACCCAGTGTCGGCTCCCCATCCAAATCCACACCA...GAGCCGCTTGTGGCTGCTGGGTGTGTGTGTGTGTGTGTGCGTGCGTGCGTGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp CGGGGTTTTCTGTGGCTTCCACGATCACTTGGTGGGCAGGGCCTCCCGCGCCCTAGCTGGGTGTTAGGATaGCAGACCATGTGGGTGACA +
Preference number: 4 (lower is better)
Translates to: RGFLWLPRSLGGQGLPRPSWVLG*QTMWVT
Trigger: TGTCACCCACATGGTCTGCCATCCTAACACCCAGCT...AGGGCGCGGGAGGCCCTGCCCACCAAGTGATCGTGGAAGCCACAGAAAACCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CCA 90 bp TCAGATCCCGCCAGCATCAGCACTCCCAGCAGAGTGGACACGGCGCCATCCAGGGCCATCAGTATGTACTaGAGGGAGAACGCCCGCAGA +
Preference number: 4 (lower is better)
Translates to: SDPASISTPSRVDTAPSRAISMY*RENARR
Trigger: TCTGCGGGCGTTCTCCCTCCAGTACATACTGATGGC...CCTGGATGGCGCCGTGTCCACTCTGCTGGGAGTGCTGATGCTGGCGGGATCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CCA 90 bp GAAGGCGGCCTCCATGATGCCAAATTGCCCAGTGGGCTATGCCACAGGCCAACCAAGGCCGCAGCACCATaGCAGAGGAGGAGAGTGCAG +
Preference number: 4 (lower is better)
Translates to: EGGLHDAKLPSGLCHRPTKAAAP*QRRRVQ
Trigger: CTGCACTCTCCTCCTCTGCCATGGTGCTGCGGCCTT...GGTTGGCCTGTGGCATAGCCCACTGGGCAATTTGGCATCATGGAGGCCGCCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CCA 90 bp ATGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACGAGGGCACTCCACAATaGCGGGGCTGCTCTGCGGGC +
Preference number: 4 (lower is better)
Translates to: MAQPRLSTRHVTEFSNTHEGTPQ*RGCSAG
Trigger: GCCCGCAGAGCAGCCCCGCCATTGTGGAGTGCCCTC...GTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CCA 90 bp ATGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCACTGGGGTCCAGCGTaGGATGTGCCCGAGCGCCAC +
Preference number: 4 (lower is better)
Translates to: MAQPRLSTRHVTEFSNTHHWGPA*DVPERH
Trigger: GTGGCGCTCGGGCACATCCCACGCTGGACCCCAGTG...GTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430669.6
CDS-3UTR TCA 90 bp ACACACGCACGCACGCACACACACACACACACACCCAGCAGCCACAAGCGGCTCCCAGGGTCGTGGTGGTaGAGGAAAGCACCTTTTGAG +
Preference number: 4 (lower is better)
Translates to: THARTHTHTHTPSSHKRLPGSWW*RKAPFE
Trigger: CTCAAAAGGTGCTTTCCTTCACCACCACGACCCTGG...GAGCCGCTTGTGGCTGCTGGGTGTGTGTGTGTGTGTGTGCGTGCGTGCGTGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp GGGGCTGCTTGTGACCTCTCCCTTCATCTGGGGGCTGGTTACACGGATGCGTTCTGTCCTGTGTCACGGTaGCGGGCTGCACAGAGATCT +
Preference number: 4 (lower is better)
Translates to: GAACDLSLHLGAGYTDAFCPVSR*RAAQRS
Trigger: AGATCTCTGTGCAGCCCGTCACCGTGACACAGGACA...GAACGCATCCGTGTAACCAGCCCCCAGATGAAGGGAGAGGTCACAAGCAGCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430669.6
CDS-3UTR TCA 90 bp TCAGATCCCGCCAGCATCAGCACTCCCAGCAGAGTGGACACGGCGCCATCCAGGAAGGCCAAAGCAACGTaGACGGTGAACTCCACTCCT +
Preference number: 4 (lower is better)
Translates to: SDPASISTPSRVDTAPSRKAKAT*TVNSTP
Trigger: AGGAGTGGAGTTCACCGTTCACGTTGCTTTGGCCTT...CCTGGATGGCGCCGTGTCCACTCTGCTGGGAGTGCTGATGCTGGCGGGATCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR TCA 90 bp ACTCTGCATGGCTGGAGGGCACAGACTCCACGCAGGGATGCGTTTCTGGAACTAGGGTTCGAGGGTGGGTaGTGCCTGGATTCGGGATGG +
Preference number: 4 (lower is better)
Translates to: TLHGWRAQTPRRDAFLELGFEGG*CLDSGW
Trigger: CCATCCCGAATCCAGGCATCACCCACCCTCGAACCC...TAGTTCCAGAAACGCATCCCTGCGTGGAGTCTGTGCCCTCCAGCCATGCAGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR TCA 90 bp ATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATTGGGGTCCTGGATGGCAGGGTTCCGAGGGTTGTaGGAACGGGCCCCGCGAGGG +
Preference number: 4 (lower is better)
Translates to: IREKEIIPLKHKLGSWMAGFRGL*ERAPRG
Trigger: CCCTCGCGGGGCCCGTTCTCACAACCCTCGGAACCC...TGCCATCCAGGACCCCAATTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp TGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCAAGCCGTCACAGTGGTaGTGGGCTGGCAGTAGCCGG +
Preference number: 4 (lower is better)
Translates to: WPSQGSALGMSPNSLTPTKPSQW*WAGSSR
Trigger: CCGGCTACTGCCAGCCCATCACCACTGTGACGGCTT...GGTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp TGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCCCTGGGGGCTGCTTGTaGCCTCTCCCTTCATCTGGG +
Preference number: 4 (lower is better)
Translates to: WPSQGSALGMSPNSLTPTPGGCL*PLPSSG
Trigger: CCCAGATGAAGGGAGAGGTCACAAGCAGCCCCCAGG...GGTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430669.6
CDS-3UTR GCA 90 bp GGGGCTGCTTGTGACCTCTCCCTTCATCTGGGGGCTGGTTACACGGATGCGTTCCTCGATGGGCTCTGCTaGCGGGATTCTCAGCCTTGT +
Preference number: 4 (lower is better)
Translates to: GAACDLSLHLGAGYTDAFLDGLC*RDSQPC
Trigger: ACAAGGCTGAGAATCCCGGCAGCAGAGCCCATCGAG...GAACGCATCCGTGTAACCAGCCCCCAGATGAAGGGAGAGGTCACAAGCAGCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430669.6
CDS-3UTR GCA 90 bp TGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCGGGCAAGCACAGCCCTaGGGTTCTTGTCGCCGATGG +
Preference number: 4 (lower is better)
Translates to: WPSQGSALGMSPNSLTPTGQAQP*GSCRRW
Trigger: CCATCGGCGACAAGAACCGCAGGGCTGTGCTTGCCC...GGTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp TGCCTGGATTCGGGATGGACCACAGTGGAGTGGGCGAAGACGGGGTTTTCTGTGGCCATCCAGGACGGGTaGAAACATGTGCTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: CLDSGWTTVEWAKTGFSVAIQDG*KHVLQG
Trigger: GCCCTGGAGCACATGTTTGCACCCGTCCTGGATGGC...CACAGAAAACCCCGTCTTCGCCCACTCCACTGTGGTCCATCCCGAATCCAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR GCA 90 bp ATGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACGAATCAGACCCGCTGTaGGTGTGGCCGGGCGGCATG +
Preference number: 4 (lower is better)
Translates to: MAQPRLSTRHVTEFSNTHESDPL*VWPGGM
Trigger: CATGCCGCCCGGCCACACGCACAGCGGGTCTGATTC...GTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp ACACGCACAGCCAAACAAGAGGACCGCACACAACGACACCTAGAGAAGCCACCACCCTCGTCTCCCCCTTaGCTTGTCGCTGCGGGTCTC +
Preference number: 4 (lower is better)
Translates to: TRTAKQEDRTQRHLEKPPPSSPP*LVAAGL
Trigger: GAGACCCGCAGCGACAAGGCAAGGGGGAGACGAGGG...TGGTGGCTTCTCTAGGTGTCGTTGTGTGCGGTCCTCTTGTTTGGCTGTGCGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430669.6
CDS-3UTR CCA 90 bp TGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCTGGACACGGCTGGCCTaGAGTGCCGAGTCCAGGTGT +
Preference number: 4 (lower is better)
Translates to: WPSQGSALGMSPNSLTPTWTRLA*SAESRC
Trigger: ACACCTGGACTCGGCACTCCAGGCCAGCCGTGTCCA...GGTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp CTCCGAGTCGGAGGAATCAGACCCGCTGTGCGTGTGGCCGGGCGGCATGGCGAATTGTACATGTATACATaGACACGGCTGGCCTGGAGT +
Preference number: 4 (lower is better)
Translates to: LRVGGIRPAVRVAGRHGELYMYT*TRLAWS
Trigger: ACTCCAGGCCAGCCGTGTCCATGTATACATGTACAA...TTCGCCATGCCGCCCGGCCACACGCACAGCGGGTCTGATTCCTCCGACTCGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CCA 90 bp ACACACGCACGCACGCACACACACACACACACACCCAGCAGCCACAAGCGGCTCATGGTCTGCAGGGCATaGGCGCTGACGAGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: THARTHTHTHTPSSHKRLMVCRA*ALTSFP
Trigger: TGGAAAACTCGTCAGCGCCCATGCCCTGCAGACCAT...GAGCCGCTTGTGGCTGCTGGGTGTGTGTGTGTGTGTGTGCGTGCGTGCGTGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp ACACGCACAGCCAAACAAGAGGACCGCACACAACGACACCTAGAGAAGCCACCAAGCCCCACGGCACCCTaGGACTTGGAGCAGTCCCAG +
Preference number: 4 (lower is better)
Translates to: TRTAKQEDRTQRHLEKPPSPTAP*DLEQSQ
Trigger: CTGGGACTGCTCCAAGTCCCAGGGTGCCGTGGGGCT...TGGTGGCTTCTCTAGGTGTCGTTGTGTGCGGTCCTCTTGTTTGGCTGTGCGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp GGGGCTGCTTGTGACCTCTCCCTTCATCTGGGGGCTGGTTACACGGATGCGTTCGTCGTGGACCCATTCTaGTCGGTGTGGCCGGATGTT +
Preference number: 4 (lower is better)
Translates to: GAACDLSLHLGAGYTDAFVVDPF*SVWPDV
Trigger: AACATCCGGCCACACCGACCAGAATGGGTCCACGAC...GAACGCATCCGTGTAACCAGCCCCCAGATGAAGGGAGAGGTCACAAGCAGCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430669.6
CDS-3UTR CCA 90 bp CACATCGGTGTGAGAAGCGCTGGTCTACAGCGATTCCACTTCACCATTCACTCTGACCCGCTGTGCGTGTaGCCGGGCGGCATGGCGAAG +
Preference number: 4 (lower is better)
Translates to: HIGVRSAGLQRFHFTIHSDPLCV*PGGMAK
Trigger: CTTCGCCATGCCGCCCGGCCACACGCACAGCGGGTC...AGAGTGAATGGTGAAGTGGAATCGCTGTAGACCAGCGCTTCTCACACCGATGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CCA 90 bp ATGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACGCTTCCACGATCACTTaGTGGGCAGGGCCTCCCGCG +
Preference number: 4 (lower is better)
Translates to: MAQPRLSTRHVTEFSNTHASTIT*WAGPPA
Trigger: CGCGGGAGGCCCTGCCCACCAAGTGATCGTGGAAGC...GTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp ACACACGCACGCACGCACACACACACACACACACCCAGCAGCCACAAGCGGCTCTGGACCACAGTGGAGTaGGCGAAGACGGGGTTTTCT +
Preference number: 4 (lower is better)
Translates to: THARTHTHTHTPSSHKRLWTTVE*AKTGFS
Trigger: AGAAAACCCCGTCTTCGCCCACTCCACTGTGGTCCA...GAGCCGCTTGTGGCTGCTGGGTGTGTGTGTGTGTGTGTGCGTGCGTGCGTGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp TGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCGACCCTGAGTCCAGGTaGGGCTGCTGTCTCGGGTTC +
Preference number: 4 (lower is better)
Translates to: WPSQGSALGMSPNSLTPTDPESR*GCCLGF
Trigger: GAACCCGAGACAGCAGCCCCACCTGGACTCAGGGTC...GGTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp AGGATGGTGAGGATCGCCAGCACAGCAAAGAAATACCTGGGAGATCAAGAGGAATCCCTGCGGGGCTGCTaGCCTTGCCGTCCGGGAGGC +
Preference number: 4 (lower is better)
Translates to: RMVRIASTAKKYLGDQEESLRGC*PCRPGG
Trigger: GCCTCCCGGACGGCAAGGCCAGCAGCCCCGCAGGGA...TTCCTCTTGATCTCCCAGGTATTTCTTTGCTGTGCTGGCGATCCTCACCATCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CCA 90 bp GGGGCTGCTTGTGACCTCTCCCTTCATCTGGGGGCTGGTTACACGGATGCGTTCGTGCTGGTGTGGATTTaGATGGGGAGCCGACACTGG +
Preference number: 4 (lower is better)
Translates to: GAACDLSLHLGAGYTDAFVLVWI*MGSRHW
Trigger: CCAGTGTCGGCTCCCCATCCAAATCCACACCAGCAC...GAACGCATCCGTGTAACCAGCCCCCAGATGAAGGGAGAGGTCACAAGCAGCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000430669.6
CDS-3UTR CCA 90 bp GGCTCAGGGGAGGGTGTGGGCAGGCGGTTCAAGCCGTTGGCTGGAGACACCTCATGCTGTGGGTATTTCTaGGGGCCCATTACCTTTCTG +
Preference number: 4 (lower is better)
Translates to: GSGEGVGRRFKPLAGDTSCCGYF*GPITFL
Trigger: CAGAAAGGTAATGGGCCCCCAGAAATACCCACAGCA...TGAGGTGTCTCCAGCCAACGGCTTGAACCGCCTGCCCACACCCTCCCCTGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CCA 90 bp GAAGGCGGCCTCCATGATGCCAAATTGCCCAGTGGGCTATGCCACAGGCCAACCGCTGGGGCATTGTGCTaGGTGAGGGCACTCCACAAT +
Preference number: 4 (lower is better)
Translates to: EGGLHDAKLPSGLCHRPTAGALC*VRALHN
Trigger: ATTGTGGAGTGCCCTCACCCAGCACAATGCCCCAGC...GGTTGGCCTGTGGCATAGCCCACTGGGCAATTTGGCATCATGGAGGCCGCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CCA 90 bp TGGGGTCCTGGATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGACCATGGCCCTCGGCGTaGGTGGTCTGCCGCGCCATA +
Preference number: 4 (lower is better)
Translates to: WGPGWQPMIIRDAVDTRRPWPSA*VVCRAI
Trigger: TATGGCGCGGCAGACCACCCACGCCGAGGGCCATGG...TCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCATCCAGGACCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430669.6
CDS-3UTR CCA 90 bp TCGGGGATGCCGAGAACCCCAGGAGAACCTTGTCCTCCTCTTTGCCTGGCTCTACTGTTTGTGTCCTTGTaGCGCTGCACCGACCCTCCG +
Preference number: 4 (lower is better)
Translates to: SGMPRTPGEPCPPLCLALLFVSL*RCTDPP
Trigger: CGGAGGGTCGGTGCAGCGCCACAAGGACACAAACAG...TAGAGCCAGGCAAAGAGGAGGACAAGGTTCTCCTGGGGTTCTCGGCATCCCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430669.6
CDS-3UTR CCA 90 bp ACACACGCACGCACGCACACACACACACACACACCCAGCAGCCACAAGCGGCTCAAGAGGGCAGCCACATaGATCTTTCCCTCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: THARTHTHTHTPSSHKRLKRAAT*IFPSSP
Trigger: GGGAGAGGAGGGAAAGATCCATGTGGCTGCCCTCTT...GAGCCGCTTGTGGCTGCTGGGTGTGTGTGTGTGTGTGTGCGTGCGTGCGTGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429896.6
3UTR CAA 72 bp GAAGCGATCAGGATGACCACGGGCACGGCACTGAGCTaGATTCCGATGAGGCCCATCATGCCGAACAGCTCG +
Preference number: 4 (lower is better)
Translates to: EAIRMTTGTALS*IPMRPIMPNSS
Trigger: CGAGCTGTTCGGCATGATGGGCCTCATCGGAATCAAGCTCAGTGCCGTGCCCGTGGTCATCCTGATCGCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR CAA 72 bp AACATGTGCTCCAGGGCAAGCACAGCCCTGCGGTTCTaGTCGCCGATGGCCGTCAGAAAGGCCAAAGCAACG +
Preference number: 4 (lower is better)
Translates to: NMCSRASTALRF*SPMAVRKAKAT
Trigger: CGTTGCTTTGGCCTTTCTGACGGCCATCGGCGACAAGAACCGCAGGGCTGTGCTTGCCCTGGAGCACATGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR CAA 72 bp GGCTCAGGGGAGGGTGTGGGCAGGCGGTTCAAGCCGTaGGCTGGAGACACCTCAGGATATGGTCCAAAGAAA +
Preference number: 4 (lower is better)
Translates to: GSGEGVGRRFKP*AGDTSGYGPKK
Trigger: TTTCTTTGGACCATATCCTGAGGTGTCTCCAGCCAACGGCTTGAACCGCCTGCCCACACCCTCCCCTGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR TCA 90 bp ACACACGCACGCACGCACACACACACACACACACCCAGCAGCCACAAGCGGCTCTCTGTCCTGTTTCACTaGAGGCGTGGGCCAGAAGAA +
Preference number: 4 (lower is better)
Translates to: THARTHTHTHTPSSHKRLSVLFH*RRGPEE
Trigger: TTCTTCTGGCCCACGCCTTCAGTGAAACAGGACAGA...GAGCCGCTTGTGGCTGCTGGGTGTGTGTGTGTGTGTGTGCGTGCGTGCGTGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp TCGGGGATGCCGAGAACCCCAGGAGAACCTTGTCCTCCTCTTTGCCTGGCTCTATGCCTCCACAAAGTCTaGGGTGTCCCGCAAGCCGTT +
Preference number: 4 (lower is better)
Translates to: SGMPRTPGEPCPPLCLALCLHKV*GVPQAV
Trigger: AACGGCTTGCGGGACACCTCAGACTTTGTGGAGGCA...TAGAGCCAGGCAAAGAGGAGGACAAGGTTCTCCTGGGGTTCTCGGCATCCCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430669.6
CDS-3UTR TCA 90 bp TGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCCTCCTCGCTGAGGCCTaGCACTGTCGTCTGGGAACT +
Preference number: 4 (lower is better)
Translates to: WPSQGSALGMSPNSLTPTLLAEA*HCRLGT
Trigger: AGTTCCCAGACGACAGTGTCAGGCCTCAGCGAGGAG...GGTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp ATGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACGCCGAAGCTCCTCGCTaGGGCCTGACACTGTCGTCT +
Preference number: 4 (lower is better)
Translates to: MAQPRLSTRHVTEFSNTHAEAPR*GLTLSS
Trigger: AGACGACAGTGTCAGGCCTCAGCGAGGAGCTTCGGC...GTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp ATGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACAAGCCGTCACAGTGGTaGTGGGCTGGCAGTAGCCGG +
Preference number: 4 (lower is better)
Translates to: MAQPRLSTRHVTEFSNTHKPSQW*WAGSSR
Trigger: CCGGCTACTGCCAGCCCATCACCACTGTGACGGCTT...GTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp ACACGCACAGCCAAACAAGAGGACCGCACACAACGACACCTAGAGAAGCCACCATTCCGCGGCACTCCTTaGGGTCCCCAACTCCCCCTA +
Preference number: 4 (lower is better)
Translates to: TRTAKQEDRTQRHLEKPPFRGTP*GPQLPL
Trigger: TAGGGGGAGTTGGGGACCGCAAGGAGTGCCGCGGAA...TGGTGGCTTCTCTAGGTGTCGTTGTGTGCGGTCCTCTTGTTTGGCTGTGCGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331920.11
CDS-3UTR GCA 90 bp TGCCTGGATTCGGGATGGACCACAGTGGAGTGGGCGAAGACGGGGTTTTCTGTGAACTGGAACATGGTCTaGAGGGCATGGGCGCTGACG +
Preference number: 4 (lower is better)
Translates to: CLDSGWTTVEWAKTGFSVNWNMV*RAWALT
Trigger: CGTCAGCGCCCATGCCCTGCAGACCATGTTCCAGTT...CACAGAAAACCCCGTCTTCGCCCACTCCACTGTGGTCCATCCCGAATCCAGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR GCA 90 bp GACACTGTCGTCTGGGAACTATACTCCGAGTCGGAGGAATCAGACCCGCTGTGCGGCCTCCAGGATGGCTaGCGCTTTGTCCTCGTTCCA +
Preference number: 4 (lower is better)
Translates to: DTVVWELYSESEESDPLCGLQDG*RFVLVP
Trigger: TGGAACGAGGACAAAGCGGCAGCCATCCTGGAGGCC...GCACAGCGGGTCTGATTCCTCCGACTCGGAGTATAGTTCCCAGACGACAGTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR GCA 90 bp ACACGCACAGCCAAACAAGAGGACCGCACACAACGACACCTAGAGAAGCCACCAGGGGGTCGTACTCCGTaGGGAGCTGGACAGTGGACT +
Preference number: 4 (lower is better)
Translates to: TRTAKQEDRTQRHLEKPPGGRTP*GAGQWT
Trigger: AGTCCACTGTCCAGCTCCGCACGGAGTACGACCCCC...TGGTGGCTTCTCTAGGTGTCGTTGTGTGCGGTCCTCTTGTTTGGCTGTGCGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp ATGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACGTCACGGTGACGGGCTaGACAGAGATCTCGGAGCGC +
Preference number: 4 (lower is better)
Translates to: MAQPRLSTRHVTEFSNTHVTVTG*TEISER
Trigger: GCGCTCCGAGATCTCTGTGCAGCCCGTCACCGTGAC...GTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp TCCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAACGGGGCTGCTGGCCTTaGCGTCCGGGAGGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: SSIHHNDPREGDYPPEAQRGCWP*RPGGRD
Trigger: GTCCCTGCCTCCCGGACGGCAAGGCCAGCAGCCCCG...TTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp CCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAAGGGTCCCTGCGGGGCTaGTGGCCTTGCCGTCCGGGA +
Preference number: 4 (lower is better)
Translates to: PASITMIREKEIIPLKHKGSLRG*WPCRPG
Trigger: TCCCGGACGGCAAGGCCAGCAGCCCCGCAGGGACCC...TTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp ACACACGCACGCACGCACACACACACACACACACCCAGCAGCCACAAGCGGCTCTCGCATTCCACGTCCTaGAGCTCAATGACTTCCACC +
Preference number: 4 (lower is better)
Translates to: THARTHTHTHTPSSHKRLSHSTS*SSMTST
Trigger: GGTGGAAGTCATTGAGCTGCAGGACGTGGAATGCGA...GAGCCGCTTGTGGCTGCTGGGTGTGTGTGTGTGTGTGTGCGTGCGTGCGTGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp GACACTGTCGTCTGGGAACTATACTCCGAGTCGGAGGAATCAGACCCGCTGTGCGGAGGTAGCTGGAGATaGAGACCCAGCCCTCATCCC +
Preference number: 4 (lower is better)
Translates to: DTVVWELYSESEESDPLCGGSWR*RPSPHP
Trigger: GGGATGAGGGCTGGGTCTGCATCTCCAGCTACCTCC...GCACAGCGGGTCTGATTCCTCCGACTCGGAGTATAGTTCCCAGACGACAGTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR GCA 90 bp ATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATTGGGGTCCTGGATGGCATCGGCGTGGGTGGTCTaGCGCGCCATAGGCAGGACC +
Preference number: 4 (lower is better)
Translates to: IREKEIIPLKHKLGSWMASAWVV*RAIGRT
Trigger: GGTCCTGCCTATGGCGCGGCAGACCACCCACGCCGA...TGCCATCCAGGACCCCAATTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430669.6
CDS-3UTR GCA 90 bp CCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAACCGGCCGTCAACCCCTaGTCGGAGCGCGGGTGCCGA +
Preference number: 4 (lower is better)
Translates to: PASITMIREKEIIPLKHKPAVNP*SERGCR
Trigger: TCGGCACCCGCGCTCCGAGCAGGGGTTGACGGCCGG...TTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430669.6
CDS-3UTR GCA 90 bp ATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATTGGGGTCCTGGATGGCAGTCCAGCGTGGGATGTaGCCGAGCGCCACAGCCCCT +
Preference number: 4 (lower is better)
Translates to: IREKEIIPLKHKLGSWMAVQRGM*PSATAP
Trigger: AGGGGCTGTGGCGCTCGGGCACATCCCACGCTGGAC...TGCCATCCAGGACCCCAATTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000430669.6
CDS-3UTR GCA 90 bp ACACGCACAGCCAAACAAGAGGACCGCACACAACGACACCTAGAGAAGCCACCAGTGTCCTTGTGGCGCTaGACCGACCCTCCGCAGGTT +
Preference number: 4 (lower is better)
Translates to: TRTAKQEDRTQRHLEKPPVSLWR*TDPPQV
Trigger: AACCTGCGGAGGGTCGGTGCAGCGCCACAAGGACAC...TGGTGGCTTCTCTAGGTGTCGTTGTGTGCGGTCCTCTTGTTTGGCTGTGCGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430669.6
CDS-3UTR CCA 90 bp ATGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACTCCTCGGCAACCCGCTaGACCATTCTGTCCCCGTGC +
Preference number: 4 (lower is better)
Translates to: MAQPRLSTRHVTEFSNTHSSATR*TILSPC
Trigger: GCACGGGGACAGAATGGTCCAGCGGGTTGCCGAGGA...GTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331920.11
CDS-3UTR CCA 90 bp TGGGGTCCTGGATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAAGCCCCACGGCACCCTaGGACTTGGAGCAGTCCCAG +
Preference number: 4 (lower is better)
Translates to: WGPGWQPMIIRDAVDTRRSPTAP*DLEQSQ
Trigger: CTGGGACTGCTCCAAGTCCCAGGGTGCCGTGGGGCT...TCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCATCCAGGACCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp TGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCACTACTACCGCTGCCTaGAGGGAGAACGCCCGCAGA +
Preference number: 4 (lower is better)
Translates to: WPSQGSALGMSPNSLTPTTTTAA*RENARR
Trigger: TCTGCGGGCGTTCTCCCTCCAGGCAGCGGTAGTAGT...GGTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331920.11
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp GACACTGTCGTCTGGGAACTATACTCCGAGTCGGAGGAATCAGACCCGCTGTGCGTGCTCTCTGGGCTCTaGCAGCTGAGGGTGTCCTGT +
Preference number: 4 (lower is better)
Translates to: DTVVWELYSESEESDPLCVLSGL*QLRVSC
Trigger: ACAGGACACCCTCAGCTGCCAGAGCCCAGAGAGCAC...GCACAGCGGGTCTGATTCCTCCGACTCGGAGTATAGTTCCCAGACGACAGTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CCA 90 bp TGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCAGAGCAGGTCCCTTGTaGAGCTGGTGCTCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: WPSQGSALGMSPNSLTPTRAGPL*SWCSLG
Trigger: GCCCAGAGAGCACCAGCTCCACAAGGGACCTGCTCT...GGTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp CGCCACCCTCCGTGTGCCCGACACAGCAGCATGGCAACGCCAGAAATGAACAAAGTCGTGGACCCATTCTaGTCGGTGTGGCCGGATGTT +
Preference number: 4 (lower is better)
Translates to: RHPPCARHSSMATPEMNKVVDPF*SVWPDV
Trigger: AACATCCGGCCACACCGACCAGAATGGGTCCACGAC...TTTGTTCATTTCTGGCGTTGCCATGCTGCTGTGTCGGGCACACGGAGGGTGGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CCA 90 bp TGCCTGGATTCGGGATGGACCACAGTGGAGTGGGCGAAGACGGGGTTTTCTGTGAGCCGTTGGGGTAACTaGACAGCCCCAGGCTCGTAT +
Preference number: 4 (lower is better)
Translates to: CLDSGWTTVEWAKTGFSVSRWGN*TAPGSY
Trigger: ATACGAGCCTGGGGCTGTCCAGTTACCCCAACGGCT...CACAGAAAACCCCGTCTTCGCCCACTCCACTGTGGTCCATCCCGAATCCAGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CCA 90 bp TGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCAACAGCAGCAGCCAGTaGCGGAGGCCGATGTACTGC +
Preference number: 4 (lower is better)
Translates to: WPSQGSALGMSPNSLTPTNSSSQ*RRPMYC
Trigger: GCAGTACATCGGCCTCCGCCACTGGCTGCTGCTGTT...GGTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp ACACGCACAGCCAAACAAGAGGACCGCACACAACGACACCTAGAGAAGCCACCAGCACTCCCAGCAGAGTaGACACGGCGCCATCCAGGA +
Preference number: 4 (lower is better)
Translates to: TRTAKQEDRTQRHLEKPPALPAE*TRRHPG
Trigger: TCCTGGATGGCGCCGTGTCCACTCTGCTGGGAGTGC...TGGTGGCTTCTCTAGGTGTCGTTGTGTGCGGTCCTCTTGTTTGGCTGTGCGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp TGGGGTCCTGGATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAGCTTCCACGATCACTTaGTGGGCAGGGCCTCCCGCG +
Preference number: 4 (lower is better)
Translates to: WGPGWQPMIIRDAVDTRRASTIT*WAGPPA
Trigger: CGCGGGAGGCCCTGCCCACCAAGTGATCGTGGAAGC...TCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCATCCAGGACCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp ATGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACGACCCTGAGTCCAGGTaGGGCTGCTGTCTCGGGTTC +
Preference number: 4 (lower is better)
Translates to: MAQPRLSTRHVTEFSNTHDPESR*GCCLGF
Trigger: GAACCCGAGACAGCAGCCCCACCTGGACTCAGGGTC...GTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp TGGGGTCCTGGATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAGCACGGAGCTGCCCATaGCAGTGGACGCTGGGTTCC +
Preference number: 4 (lower is better)
Translates to: WGPGWQPMIIRDAVDTRRARSCP*QWTLGS
Trigger: GGAACCCAGCGTCCACTGCCATGGGCAGCTCCGTGC...TCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCATCCAGGACCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp ACACACGCACGCACGCACACACACACACACACACCCAGCAGCCACAAGCGGCTCAACAAGGTGCTGGTGTaGATTTGGATGGGGAGCCGA +
Preference number: 4 (lower is better)
Translates to: THARTHTHTHTPSSHKRLNKVLV*IWMGSR
Trigger: TCGGCTCCCCATCCAAATCCACACCAGCACCTTGTT...GAGCCGCTTGTGGCTGCTGGGTGTGTGTGTGTGTGTGTGCGTGCGTGCGTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp TGGGGTCCTGGATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGACGGCGCAACACGAGCTaGGCTCAGGAAGGGAGCGAG +
Preference number: 4 (lower is better)
Translates to: WGPGWQPMIIRDAVDTRRRRNTS*AQEGSE
Trigger: CTCGCTCCCTTCCTGAGCCCAGCTCGTGTTGCGCCG...TCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCATCCAGGACCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp TGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCGACACTCTGCATGGCTaGAGGGCACAGACTCCACGC +
Preference number: 4 (lower is better)
Translates to: WPSQGSALGMSPNSLTPTDTLHG*RAQTPR
Trigger: GCGTGGAGTCTGTGCCCTCCAGCCATGCAGAGTGTC...GGTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CCA 90 bp TCCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAGAGCGCGGGTGCCGATaGCGCGGACGCTGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: SSIHHNDPREGDYPPEAQERGCR*RGRWAW
Trigger: CCAAGCCCAGCGTCCGCGCCATCGGCACCCGCGCTC...TTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430669.6
CDS-3UTR CCA 90 bp ATGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACGGCCTGAGGTGTCCCTaGGGGCTGCTTGTGACCTCT +
Preference number: 4 (lower is better)
Translates to: MAQPRLSTRHVTEFSNTHGLRCP*GLLVTS
Trigger: AGAGGTCACAAGCAGCCCCCAGGGACACCTCAGGCC...GTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430669.6
CDS-3UTR TCA 90 bp TGCCTGGATTCGGGATGGACCACAGTGGAGTGGGCGAAGACGGGGTTTTCTGTGCCAGGGTCGTGGTGGTaGAGGAAAGCACCTTTTGAG +
Preference number: 4 (lower is better)
Translates to: CLDSGWTTVEWAKTGFSVPGSWW*RKAPFE
Trigger: CTCAAAAGGTGCTTTCCTTCACCACCACGACCCTGG...CACAGAAAACCCCGTCTTCGCCCACTCCACTGTGGTCCATCCCGAATCCAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR TCA 90 bp CTCCGAGTCGGAGGAATCAGACCCGCTGTGCGTGTGGCCGGGCGGCATGGCGAAAGAAATGGCAAAACCTaGGTTGTTGCAGCGTTAAAG +
Preference number: 4 (lower is better)
Translates to: LRVGGIRPAVRVAGRHGERNGKT*VVAALK
Trigger: CTTTAACGCTGCAACAACTCAGGTTTTGCCATTTCT...TTCGCCATGCCGCCCGGCCACACGCACAGCGGGTCTGATTCCTCCGACTCGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR TCA 90 bp TGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCTGTCCCGCAAGCCGTTaGGGTAGAAAGGGAACTGGG +
Preference number: 4 (lower is better)
Translates to: WPSQGSALGMSPNSLTPTCPASR*GRKGTG
Trigger: CCCAGTTCCCTTTCTACCTCAACGGCTTGCGGGACA...GGTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp TGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCTGCCTCCACAAAGTCTaGGGTGTCCCGCAAGCCGTT +
Preference number: 4 (lower is better)
Translates to: WPSQGSALGMSPNSLTPTCLHKV*GVPQAV
Trigger: AACGGCTTGCGGGACACCTCAGACTTTGTGGAGGCA...GGTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp TGGGGTCCTGGATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGACCAGGACCATCACAATaGTCCCGGCCGTCCAGGGGT +
Preference number: 4 (lower is better)
Translates to: WGPGWQPMIIRDAVDTRRPGPSQ*SRPSRG
Trigger: ACCCCTGGACGGCCGGGATCATTGTGATGGTCCTGG...TCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCATCCAGGACCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp ATGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACGAACGCCGAGGATGGTaGGGATCGCCAGCACAGCAA +
Preference number: 4 (lower is better)
Translates to: MAQPRLSTRHVTEFSNTHERRGW*GSPAQQ
Trigger: TTGCTGTGCTGGCGATCCTCACCATCCTCGGCGTTC...GTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp ACACGCACAGCCAAACAAGAGGACCGCACACAACGACACCTAGAGAAGCCACCAGAACGCCGAGGATGGTaGGGATCGCCAGCACAGCAA +
Preference number: 4 (lower is better)
Translates to: TRTAKQEDRTQRHLEKPPERRGW*GSPAQQ
Trigger: TTGCTGTGCTGGCGATCCTCACCATCCTCGGCGTTC...TGGTGGCTTCTCTAGGTGTCGTTGTGTGCGGTCCTCTTGTTTGGCTGTGCGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp ACACGCACAGCCAAACAAGAGGACCGCACACAACGACACCTAGAGAAGCCACCACTCCTCGCTGAGGCCTaGCACTGTCGTCTGGGAACT +
Preference number: 4 (lower is better)
Translates to: TRTAKQEDRTQRHLEKPPLLAEA*HCRLGT
Trigger: AGTTCCCAGACGACAGTGTCAGGCCTCAGCGAGGAG...TGGTGGCTTCTCTAGGTGTCGTTGTGTGCGGTCCTCTTGTTTGGCTGTGCGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp TCCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAGGGTTCCGAGGGTTGTaGGAACGGGCCCCGCGAGGG +
Preference number: 4 (lower is better)
Translates to: SSIHHNDPREGDYPPEAQGFRGL*ERAPRG
Trigger: CCCTCGCGGGGCCCGTTCTCACAACCCTCGGAACCC...TTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp TGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCCTCAGCACATCGGTGTaGGAAGCGCTGGTCTACAGC +
Preference number: 4 (lower is better)
Translates to: WPSQGSALGMSPNSLTPTLSTSV*EALVYS
Trigger: GCTGTAGACCAGCGCTTCTCACACCGATGTGCTGAG...GGTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR TCA 90 bp CTCCGAGTCGGAGGAATCAGACCCGCTGTGCGTGTGGCCGGGCGGCATGGCGAAGCCCTTTTAAGTGCTTaGAAGAGGAACCCTGATATT +
Preference number: 4 (lower is better)
Translates to: LRVGGIRPAVRVAGRHGEALLSA*KRNPDI
Trigger: AATATCAGGGTTCCTCTTTCAAGCACTTAAAAGGGC...TTCGCCATGCCGCCCGGCCACACGCACAGCGGGTCTGATTCCTCCGACTCGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR GCA 90 bp TGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCGACTCTGCTTTCTTGTaGTCCTCGGCAACCCGCTGG +
Preference number: 4 (lower is better)
Translates to: WPSQGSALGMSPNSLTPTDSAFL*SSATRW
Trigger: CCAGCGGGTTGCCGAGGAGCACAAGAAAGCAGAGTC...GGTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331920.11
CDS-3UTR GCA 90 bp ATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAGTCTAGCTTTTCCTGGGCGCTCGGCTTaGGAGGACGCTGCTGGCCGC +
Preference number: 4 (lower is better)
Translates to: MAANDHKRCRRHEESLAFPGRSA*EDAAGR
Trigger: GCGGCCAGCAGCGTCCTCGCAAGCCGAGCGCCCAGG...AAAAGCTAGACTCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331920.11
CDS-3UTR GCA 90 bp CTCCGAGTCGGAGGAATCAGACCCGCTGTGCGTGTGGCCGGGCGGCATGGCGAAACAATCAACTCCTCCTaGCAGTGCATATACTTTCTG +
Preference number: 4 (lower is better)
Translates to: LRVGGIRPAVRVAGRHGETINSS*QCIYFL
Trigger: CAGAAAGTATATGCACTGGCAGGAGGAGTTGATTGT...TTCGCCATGCCGCCCGGCCACACGCACAGCGGGTCTGATTCCTCCGACTCGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR GCA 90 bp TGGGGTCCTGGATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAGTCACGGTGACGGGCTaGACAGAGATCTCGGAGCGC +
Preference number: 4 (lower is better)
Translates to: WGPGWQPMIIRDAVDTRRVTVTG*TEISER
Trigger: GCGCTCCGAGATCTCTGTGCAGCCCGTCACCGTGAC...TCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCATCCAGGACCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp TGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCTGGGCTTATCGCGGCTaGCGGTTTGCACCAGGAGTT +
Preference number: 4 (lower is better)
Translates to: WPSQGSALGMSPNSLTPTWAYRG*RFAPGV
Trigger: AACTCCTGGTGCAAACCGGCAGCCGCGATAAGCCCA...GGTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp GACACTGTCGTCTGGGAACTATACTCCGAGTCGGAGGAATCAGACCCGCTGTGCCTCGATGGGCTCTGCTaGCGGGATTCTCAGCCTTGT +
Preference number: 4 (lower is better)
Translates to: DTVVWELYSESEESDPLCLDGLC*RDSQPC
Trigger: ACAAGGCTGAGAATCCCGGCAGCAGAGCCCATCGAG...GCACAGCGGGTCTGATTCCTCCGACTCGGAGTATAGTTCCCAGACGACAGTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR GCA 90 bp TGGGGTCCTGGATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAGGGCAAGCACAGCCCTaGGGTTCTTGTCGCCGATGG +
Preference number: 4 (lower is better)
Translates to: WGPGWQPMIIRDAVDTRRGQAQP*GSCRRW
Trigger: CCATCGGCGACAAGAACCGCAGGGCTGTGCTTGCCC...TCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCATCCAGGACCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp TGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCACGGGTGCAAACATGTaGTCCAGGGCAAGCACAGCC +
Preference number: 4 (lower is better)
Translates to: WPSQGSALGMSPNSLTPTTGANM*SRASTA
Trigger: GGCTGTGCTTGCCCTGGAGCACATGTTTGCACCCGT...GGTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp ATGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACGCCATCCAGGACGGGTaGAAACATGTGCTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: MAQPRLSTRHVTEFSNTHAIQDG*KHVLQG
Trigger: GCCCTGGAGCACATGTTTGCACCCGTCCTGGATGGC...GTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp TCAGATCCCGCCAGCATCAGCACTCCCAGCAGAGTGGACACGGCGCCATCCAGGTGGTCTAATGTAAACTaGTGGAACTTTCGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: SDPASISTPSRVDTAPSRWSNVN*WNFRLG
Trigger: CCCCAGCCGAAAGTTCCAGCAGTTTACATTAGACCA...CCTGGATGGCGCCGTGTCCACTCTGCTGGGAGTGCTGATGCTGGCGGGATCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR GCA 90 bp ACACACGCACGCACGCACACACACACACACACACCCAGCAGCCACAAGCGGCTCCAATTCGCTGTGGCATaGACCTCCATAAAGACTGGC +
Preference number: 4 (lower is better)
Translates to: THARTHTHTHTPSSHKRLQFAVA*TSIKTG
Trigger: GCCAGTCTTTATGGAGGTGCATGCCACAGCGAATTG...GAGCCGCTTGTGGCTGCTGGGTGTGTGTGTGTGTGTGTGCGTGCGTGCGTGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430669.6
CDS-3UTR CCA 90 bp ATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATTGGGGTCCTGGATGGCACGGCGTCGCAGTAGCTaGGCCGGTGCAGATAGTCCC +
Preference number: 4 (lower is better)
Translates to: IREKEIIPLKHKLGSWMARRRSS*AGADSP
Trigger: GGGACTATCTGCACCGGCCCAGCTACTGCGACGCCG...TGCCATCCAGGACCCCAATTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331920.11
CDS-3UTR CCA 90 bp TGGGGTCCTGGATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAGCCAGGCCTCCAGGATaGCTGCCGCTTTGTCCTCGT +
Preference number: 4 (lower is better)
Translates to: WGPGWQPMIIRDAVDTRRARPPG*LPLCPR
Trigger: ACGAGGACAAAGCGGCAGCCATCCTGGAGGCCTGGC...TCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCATCCAGGACCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp ACACGCACAGCCAAACAAGAGGACCGCACACAACGACACCTAGAGAAGCCACCAGCTGCTGTAGGGAGGTaGGGGGCTGTAGCGGGTATT +
Preference number: 4 (lower is better)
Translates to: TRTAKQEDRTQRHLEKPPAAVGR*GAVAGI
Trigger: AATACCCGCTACAGCCCCCCACCTCCCTACAGCAGC...TGGTGGCTTCTCTAGGTGTCGTTGTGTGCGGTCCTCTTGTTTGGCTGTGCGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp ACACGCACAGCCAAACAAGAGGACCGCACACAACGACACCTAGAGAAGCCACCAAGCGCGGCTCAGCGGTaGTGTAGTACACGTGCGTGT +
Preference number: 4 (lower is better)
Translates to: TRTAKQEDRTQRHLEKPPSAAQR*CSTRAC
Trigger: ACACGCACGTGTACTACACCACCGCTGAGCCGCGCT...TGGTGGCTTCTCTAGGTGTCGTTGTGTGCGGTCCTCTTGTTTGGCTGTGCGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp ACACGCACAGCCAAACAAGAGGACCGCACACAACGACACCTAGAGAAGCCACCAAGAGCAGGTCCCTTGTaGAGCTGGTGCTCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: TRTAKQEDRTQRHLEKPPRAGPL*SWCSLG
Trigger: GCCCAGAGAGCACCAGCTCCACAAGGGACCTGCTCT...TGGTGGCTTCTCTAGGTGTCGTTGTGTGCGGTCCTCTTGTTTGGCTGTGCGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp TGGGGTCCTGGATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAGGTGTGGCCGGATGTTaGCCTGGGAGGCAGCATACG +
Preference number: 4 (lower is better)
Translates to: WGPGWQPMIIRDAVDTRRGVAGC*PGRQHT
Trigger: CGTATGCTGCCTCCCAGGCCAACATCCGGCCACACC...TCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCATCCAGGACCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp ATGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCCATTCTGGTCGGTGTaGCCGGATGTTGGCCTGGGA +
Preference number: 4 (lower is better)
Translates to: MAQPRLSTRHVTEFSNTHPFWSV*PDVGLG
Trigger: TCCCAGGCCAACATCCGGCCACACCGACCAGAATGG...GTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp TGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCACTGGGCATACTCGATaGGCTCTGCTGCCGGGATTC +
Preference number: 4 (lower is better)
Translates to: WPSQGSALGMSPNSLTPTTGHTR*ALLPGF
Trigger: GAATCCCGGCAGCAGAGCCCATCGAGTATGCCCAGT...GGTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp TGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCAGCCGTTGGGGTAACTaGACAGCCCCAGGCTCGTAT +
Preference number: 4 (lower is better)
Translates to: WPSQGSALGMSPNSLTPTSRWGN*TAPGSY
Trigger: ATACGAGCCTGGGGCTGTCCAGTTACCCCAACGGCT...GGTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp GGGGCTGCTTGTGACCTCTCCCTTCATCTGGGGGCTGGTTACACGGATGCGTTCGTTCAAGCCGTTGGCTaGAGACACCTCAGGATATGG +
Preference number: 4 (lower is better)
Translates to: GAACDLSLHLGAGYTDAFVQAVG*RHLRIW
Trigger: CCATATCCTGAGGTGTCTCCAGCCAACGGCTTGAAC...GAACGCATCCGTGTAACCAGCCCCCAGATGAAGGGAGAGGTCACAAGCAGCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430669.6
CDS-3UTR CCA 90 bp CCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAACGAAGCGGACCACGCTaGGGGGTGGCTCAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: PASITMIREKEIIPLKHKRSGPR*GVAQGR
Trigger: CCTCCCCTGAGCCACCCCCCAGCGTGGTCCGCTTCG...TTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp TCCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAATGTGGCCGGGCGGCATaGCGAAGCGGACCACGCTGG +
Preference number: 4 (lower is better)
Translates to: SSIHHNDPREGDYPPEAQCGRAA*RSGPRW
Trigger: CCAGCGTGGTCCGCTTCGCCATGCCGCCCGGCCACA...TTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp CCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAAGACCCGCTGTGCGTGTaGCCGGGCGGCATGGCGAAG +
Preference number: 4 (lower is better)
Translates to: PASITMIREKEIIPLKHKDPLCV*PGGMAK
Trigger: CTTCGCCATGCCGCCCGGCCACACGCACAGCGGGTC...TTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp TGGGGTCCTGGATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGACGGGATGGACCACAGTaGAGTGGGCGAAGACGGGGT +
Preference number: 4 (lower is better)
Translates to: WGPGWQPMIIRDAVDTRRRDGPQ*SGRRRG
Trigger: ACCCCGTCTTCGCCCACTCCACTGTGGTCCATCCCG...TCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCATCCAGGACCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp ATGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACTCTCGGGTTCGAGGGTaGGTGATGCCTGGATTCGGG +
Preference number: 4 (lower is better)
Translates to: MAQPRLSTRHVTEFSNTHSRVRG*VMPGFG
Trigger: CCCGAATCCAGGCATCACCCACCCTCGAACCCGAGA...GTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp ATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAGTCTAGCTTTTTCCCTGCGGGGCTGCTaGCCTTGCCGTCCGGGAGGC +
Preference number: 4 (lower is better)
Translates to: MAANDHKRCRRHEESLAFSLRGC*PCRPGG
Trigger: GCCTCCCGGACGGCAAGGCCAGCAGCCCCGCAGGGA...AAAAGCTAGACTCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp TGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCCATGGCAGTGGACGCTaGGTTCCGAGGGTTGTGAGA +
Preference number: 4 (lower is better)
Translates to: WPSQGSALGMSPNSLTPTHGSGR*VPRVVR
Trigger: TCTCACAACCCTCGGAACCCAGCGTCCACTGCCATG...GGTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp TGGGGTCCTGGATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAAGCTGCCCATGGCAGTaGACGCTGGGTTCCGAGGGT +
Preference number: 4 (lower is better)
Translates to: WGPGWQPMIIRDAVDTRRSCPWQ*TLGSEG
Trigger: ACCCTCGGAACCCAGCGTCCACTGCCATGGGCAGCT...TCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCATCCAGGACCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp ACACGCACAGCCAAACAAGAGGACCGCACACAACGACACCTAGAGAAGCCACCAACGTGGAAAGGCACGTaGGGGTCCTCAAACAGGCCG +
Preference number: 4 (lower is better)
Translates to: TRTAKQEDRTQRHLEKPPTWKGT*GSSNRP
Trigger: CGGCCTGTTTGAGGACCCCCACGTGCCTTTCCACGT...TGGTGGCTTCTCTAGGTGTCGTTGTGTGCGGTCCTCTTGTTTGGCTGTGCGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp CGCCACCCTCCGTGTGCCCGACACAGCAGCATGGCAACGCCAGAAATGAACAAAGGAAAGAGGTGGGGGTaGGGGGTTTCCAATCTTTGG +
Preference number: 4 (lower is better)
Translates to: RHPPCARHSSMATPEMNKGKRWG*GVSNLW
Trigger: CCAAAGATTGGAAACCCCCCACCCCCACCTCTTTCC...TTTGTTCATTTCTGGCGTTGCCATGCTGCTGTGTCGGGCACACGGAGGGTGGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CCA 90 bp TGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCTGGTGTGGATTTGGATaGGGAGCCGACACTGGGTGC +
Preference number: 4 (lower is better)
Translates to: WPSQGSALGMSPNSLTPTWCGFG*GADTGC
Trigger: GCACCCAGTGTCGGCTCCCCATCCAAATCCACACCA...GGTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp GAAGGCGGCCTCCATGATGCCAAATTGCCCAGTGGGCTATGCCACAGGCCAACCGAGGTCACTATGCTGTaGGTATTTCTGGGGGCCCAT +
Preference number: 4 (lower is better)
Translates to: EGGLHDAKLPSGLCHRPTEVTML*VFLGAH
Trigger: ATGGGCCCCCAGAAATACCCACAGCATAGTGACCTC...GGTTGGCCTGTGGCATAGCCCACTGGGCAATTTGGCATCATGGAGGCCGCCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CCA 90 bp GGGGCTGCTTGTGACCTCTCCCTTCATCTGGGGGCTGGTTACACGGATGCGTTCGAGGTCACTATGCTGTaGGTATTTCTGGGGGCCCAT +
Preference number: 4 (lower is better)
Translates to: GAACDLSLHLGAGYTDAFEVTML*VFLGAH
Trigger: ATGGGCCCCCAGAAATACCCACAGCATAGTGACCTC...GAACGCATCCGTGTAACCAGCCCCCAGATGAAGGGAGAGGTCACAAGCAGCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000430669.6
CDS-3UTR CCA 90 bp TCGGGGATGCCGAGAACCCCAGGAGAACCTTGTCCTCCTCTTTGCCTGGCTCTAGGATGGCAGACCATGTaGGTGACAGGCACCAAGACA +
Preference number: 4 (lower is better)
Translates to: SGMPRTPGEPCPPLCLALGWQTM*VTGTKT
Trigger: TGTCTTGGTGCCTGTCACCCACATGGTCTGCCATCC...TAGAGCCAGGCAAAGAGGAGGACAAGGTTCTCCTGGGGTTCTCGGCATCCCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430669.6
CDS-3UTR CCA 90 bp ATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATTGGGGTCCTGGATGGCACGGCGCAACACGAGCTaGGCTCAGGAAGGGAGCGAG +
Preference number: 4 (lower is better)
Translates to: IREKEIIPLKHKLGSWMARRNTS*AQEGSE
Trigger: CTCGCTCCCTTCCTGAGCCCAGCTCGTGTTGCGCCG...TGCCATCCAGGACCCCAATTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp CAGAGTTCTATCCAAGAGCAGGTCCCTCACAAAGCCATGGAGGCTGCTCAAAGACGGCGCAACACGAGCTaGGCTCAGGAAGGGAGCGAG +
Preference number: 4 (lower is better)
Translates to: QSSIQEQVPHKAMEAAQRRRNTS*AQEGSE
Trigger: CTCGCTCCCTTCCTGAGCCCAGCTCGTGTTGCGCCG...TCTTTGAGCAGCCTCCATGGCTTTGTGAGGGACCTGCTCTTGGATAGAACTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR CAA 72 bp CTGGCTGATGTCGATGGGCTTATCGCGGCTGCCGGTTaGCACCAGGAGTTTGTAGGCAAGGACTCCATCGTC +
Preference number: 4 (lower is better)
Translates to: LADVDGLIAAAG*HQEFVGKDSIV
Trigger: GACGATGGAGTCCTTGCCTACAAACTCCTGGTGCAAACCGGCAGCCGCGATAAGCCCATCGACATCAGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR TCA 90 bp ACACACGCACGCACGCACACACACACACACACACCCAGCAGCCACAAGCGGCTCGTTCCAGTTGATGTGTaGGACATACTCGTACCCCTT +
Preference number: 4 (lower is better)
Translates to: THARTHTHTHTPSSHKRLVPVDV*DILVPL
Trigger: AAGGGGTACGAGTATGTCTCACACATCAACTGGAAC...GAGCCGCTTGTGGCTGCTGGGTGTGTGTGTGTGTGTGTGCGTGCGTGCGTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp ACACACGCACGCACGCACACACACACACACACACCCAGCAGCCACAAGCGGCTCAAGGAAAGCACCTTTTaGGTGGAGTTCTGTGCGACA +
Preference number: 4 (lower is better)
Translates to: THARTHTHTHTPSSHKRLKESTF*VEFCAT
Trigger: TGTCGCACAGAACTCCACTCAAAAGGTGCTTTCCTT...GAGCCGCTTGTGGCTGCTGGGTGTGTGTGTGTGTGTGTGCGTGCGTGCGTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp TGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCCCAGGGTCGTGGTGGTaGAGGAAAGCACCTTTTGAG +
Preference number: 4 (lower is better)
Translates to: WPSQGSALGMSPNSLTPTPGSWW*RKAPFE
Trigger: CTCAAAAGGTGCTTTCCTTCACCACCACGACCCTGG...GGTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp TGGGGTCCTGGATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGACAGTCCTGCAGCCACTaGCAGTGCAACCAGCAGGAC +
Preference number: 4 (lower is better)
Translates to: WGPGWQPMIIRDAVDTRRQSCSH*QCNQQD
Trigger: GTCCTGCTGGTTGCACTGTCAGTGGCTGCAGGACTG...TCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCATCCAGGACCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp ACACGCACAGCCAAACAAGAGGACCGCACACAACGACACCTAGAGAAGCCACCATGTCCTGTGTCACGGTaGCGGGCTGCACAGAGATCT +
Preference number: 4 (lower is better)
Translates to: TRTAKQEDRTQRHLEKPPCPVSR*RAAQRS
Trigger: AGATCTCTGTGCAGCCCGTCACCGTGACACAGGACA...TGGTGGCTTCTCTAGGTGTCGTTGTGTGCGGTCCTCTTGTTTGGCTGTGCGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp ACACGCACAGCCAAACAAGAGGACCGCACACAACGACACCTAGAGAAGCCACCATGGTGCCATAAAGGCTaGCCCCCAGCAAGCCCAGAA +
Preference number: 4 (lower is better)
Translates to: TRTAKQEDRTQRHLEKPPWCHKG*PPASPE
Trigger: TTCTGGGCTTGCTGGGGGTCAGCCTTTATGGCACCA...TGGTGGCTTCTCTAGGTGTCGTTGTGTGCGGTCCTCTTGTTTGGCTGTGCGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp ATGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACTGGTGCCATAAAGGCTaGCCCCCAGCAAGCCCAGAA +
Preference number: 4 (lower is better)
Translates to: MAQPRLSTRHVTEFSNTHWCHKG*PPASPE
Trigger: TTCTGGGCTTGCTGGGGGTCAGCCTTTATGGCACCA...GTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp ATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATTGGGGTCCTGGATGGCACGACGGGGTCGTTGCTaGCCCAAGCCGTCAGGTAGA +
Preference number: 4 (lower is better)
Translates to: IREKEIIPLKHKLGSWMARRGRC*PKPSGR
Trigger: TCTACCTGACGGCTTGGGTCAGCAACGACCCCGTCG...TGCCATCCAGGACCCCAATTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp ACACGCACAGCCAAACAAGAGGACCGCACACAACGACACCTAGAGAAGCCACCATGTCCCGCAAGCCGTTaGGGTAGAAAGGGAACTGGG +
Preference number: 4 (lower is better)
Translates to: TRTAKQEDRTQRHLEKPPCPASR*GRKGTG
Trigger: CCCAGTTCCCTTTCTACCTCAACGGCTTGCGGGACA...TGGTGGCTTCTCTAGGTGTCGTTGTGTGCGGTCCTCTTGTTTGGCTGTGCGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp ATGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACTGCCTCCACAAAGTCTaGGGTGTCCCGCAAGCCGTT +
Preference number: 4 (lower is better)
Translates to: MAQPRLSTRHVTEFSNTHCLHKV*GVPQAV
Trigger: AACGGCTTGCGGGACACCTCAGACTTTGTGGAGGCA...GTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp ATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATTGGGGTCCTGGATGGCACCAGGACCATCACAATaGTCCCGGCCGTCCAGGGGT +
Preference number: 4 (lower is better)
Translates to: IREKEIIPLKHKLGSWMAPGPSQ*SRPSRG
Trigger: ACCCCTGGACGGCCGGGATCATTGTGATGGTCCTGG...TGCCATCCAGGACCCCAATTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp TGGGGTCCTGGATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGACTCCTCGCTGAGGCCTaGCACTGTCGTCTGGGAACT +
Preference number: 4 (lower is better)
Translates to: WGPGWQPMIIRDAVDTRRLLAEA*HCRLGT
Trigger: AGTTCCCAGACGACAGTGTCAGGCCTCAGCGAGGAG...TCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCATCCAGGACCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp ATGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACGGCCACATCCACTCTTaGATTTGGGGGTGTTGGGGG +
Preference number: 4 (lower is better)
Translates to: MAQPRLSTRHVTEFSNTHGHIHS*IWGCWG
Trigger: CCCCCAACACCCCCAAATTCAAGAGTGGATGTGGCC...GTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp TGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCTCTCTGGTTACGAGATaGGGGAGCCCACACCTCAGA +
Preference number: 4 (lower is better)
Translates to: WPSQGSALGMSPNSLTPTSLVTR*GSPHLR
Trigger: TCTGAGGTGTGGGCTCCCTCATCTCGTAACCAGAGA...GGTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp ACACACGCACGCACGCACACACACACACACACACCCAGCAGCCACAAGCGGCTCTTGAAAGAGGAACCCTaGTATTTCTGGGCGGGAACA +
Preference number: 4 (lower is better)
Translates to: THARTHTHTHTPSSHKRLLKEEP*YFWAGT
Trigger: TGTTCCCGCCCAGAAATATCAGGGTTCCTCTTTCAA...GAGCCGCTTGTGGCTGCTGGGTGTGTGTGTGTGTGTGTGCGTGCGTGCGTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR TCA 90 bp CGCCACCCTCCGTGTGCCCGACACAGCAGCATGGCAACGCCAGAAATGAACAAATGGCAACGCCAGAAATaGACAAAACCCACCCCACTG +
Preference number: 4 (lower is better)
Translates to: RHPPCARHSSMATPEMNKWQRQK*TKPTPL
Trigger: CAGTGGGGTGGGTTTTGTTCATTTCTGGCGTTGCCA...TTTGTTCATTTCTGGCGTTGCCATGCTGCTGTGTCGGGCACACGGAGGGTGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR GCA 90 bp ACACGCACAGCCAAACAAGAGGACCGCACACAACGACACCTAGAGAAGCCACCACGGGGAGTCAGACCCTaGGCCTTCCATTGCCACATT +
Preference number: 4 (lower is better)
Translates to: TRTAKQEDRTQRHLEKPPRGVRP*AFHCHI
Trigger: AATGTGGCAATGGAAGGCGCAGGGTCTGACTCCCCG...TGGTGGCTTCTCTAGGTGTCGTTGTGTGCGGTCCTCTTGTTTGGCTGTGCGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331920.11
CDS-3UTR GCA 90 bp CCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAACCACGCTGGCTCCTGTaGGCTTCAGGCACTCCCCGG +
Preference number: 4 (lower is better)
Translates to: PASITMIREKEIIPLKHKPRWLL*ASGTPR
Trigger: CCGGGGAGTGCCTGAAGCGCACAGGAGCCAGCGTGG...TTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp ACACACGCACGCACGCACACACACACACACACACCCAGCAGCCACAAGCGGCTCCCAGTCACTGTCAAATaGATCCTGAAGTCCCTGAAG +
Preference number: 4 (lower is better)
Translates to: THARTHTHTHTPSSHKRLPVTVK*ILKSLK
Trigger: CTTCAGGGACTTCAGGATGCATTTGACAGTGACTGG...GAGCCGCTTGTGGCTGCTGGGTGTGTGTGTGTGTGTGTGCGTGCGTGCGTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp ATGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCTCGATGGGCTCTGCTaGCGGGATTCTCAGCCTTGT +
Preference number: 4 (lower is better)
Translates to: MAQPRLSTRHVTEFSNTHLDGLC*RDSQPC
Trigger: ACAAGGCTGAGAATCCCGGCAGCAGAGCCCATCGAG...GTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp ACACACGCACGCACGCACACACACACACACACACCCAGCAGCCACAAGCGGCTCCCAGGCTCGTATAGTTaGTGCAGATGGTCCTTACTT +
Preference number: 4 (lower is better)
Translates to: THARTHTHTHTPSSHKRLPGSYS*CRWSLL
Trigger: AAGTAAGGACCATCTGCAGCAACTATACGAGCCTGG...GAGCCGCTTGTGGCTGCTGGGTGTGTGTGTGTGTGTGTGCGTGCGTGCGTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp ACACGCACAGCCAAACAAGAGGACCGCACACAACGACACCTAGAGAAGCCACCAACGGGTGCAAACATGTaGTCCAGGGCAAGCACAGCC +
Preference number: 4 (lower is better)
Translates to: TRTAKQEDRTQRHLEKPPTGANM*SRASTA
Trigger: GGCTGTGCTTGCCCTGGAGCACATGTTTGCACCCGT...TGGTGGCTTCTCTAGGTGTCGTTGTGTGCGGTCCTCTTGTTTGGCTGTGCGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp CCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAAAGCCGGGCACGGAGCTaGCCATGGCAGTGGACGCTG +
Preference number: 4 (lower is better)
Translates to: PASITMIREKEIIPLKHKSRARS*PWQWTL
Trigger: CAGCGTCCACTGCCATGGGCAGCTCCGTGCCCGGCT...TTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp TCCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAAGCCGGGCACGGAGCTaGCCATGGCAGTGGACGCTG +
Preference number: 4 (lower is better)
Translates to: SSIHHNDPREGDYPPEAQSRARS*PWQWTL
Trigger: CAGCGTCCACTGCCATGGGCAGCTCCGTGCCCGGCT...TTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp GAAGGCGGCCTCCATGATGCCAAATTGCCCAGTGGGCTATGCCACAGGCCAACCTCCATGATGCCAAATTaGCCAGTGGGCTATGCCACA +
Preference number: 4 (lower is better)
Translates to: EGGLHDAKLPSGLCHRPTSMMPN*PVGYAT
Trigger: TGTGGCATAGCCCACTGGGCAATTTGGCATCATGGA...GGTTGGCCTGTGGCATAGCCCACTGGGCAATTTGGCATCATGGAGGCCGCCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR GCA 90 bp CTGTTGTACATGTATACATGGACACGGCTGGCCTGGAGTGCCGAGTCCAGGTGTCCTCCAACTTGTCGCTaGGGGTCTCTTTGTCTCCCC +
Preference number: 4 (lower is better)
Translates to: LLYMYTWTRLAWSAESRCPPTCR*GSLCLP
Trigger: GGGGAGACAAAGAGACCCGCAGCGACAAGTTGGAGG...ACACCTGGACTCGGCACTCCAGGCCAGCCGTGTCCATGTATACATGTACAACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551623.1
CDS-3UTR CCA 90 bp CCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAACTGCTGGGTTCGCGGTaGCTGCTCGGTCCCGGACTC +
Preference number: 4 (lower is better)
Translates to: PASITMIREKEIIPLKHKLLGSR*LLGPGL
Trigger: GAGTCCGGGACCGAGCAGCCACCGCGAACCCAGCAG...TTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331920.11
CDS-3UTR CCA 90 bp AAGAGCACTAATGACGGGGAGGATGGAGACAATGTTTGGATTTACTTAGGAAGCGGCTCCTGGCGCGCCTaGGCGCTCGGCTTGCGAGGA +
Preference number: 4 (lower is better)
Translates to: KSTNDGEDGDNVWIYLGSGSWRA*ALGLRG
Trigger: TCCTCGCAAGCCGAGCGCCCAGGCGCGCCAGGAGCC...GCTTCCTAAGTAAATCCAAACATTGTCTCCATCCTCCCCGTCATTAGTGCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331920.11
CDS-3UTR CCA 90 bp GACACTGTCGTCTGGGAACTATACTCCGAGTCGGAGGAATCAGACCCGCTGTGCACAGCTCCTCCACGTTaGTCTCGAGGTTCGCTGCTT +
Preference number: 4 (lower is better)
Translates to: DTVVWELYSESEESDPLCTAPPR*SRGSLL
Trigger: AAGCAGCGAACCTCGAGACCAACGTGGAGGAGCTGT...GCACAGCGGGTCTGATTCCTCCGACTCGGAGTATAGTTCCCAGACGACAGTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CCA 90 bp ATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATTGGGGTCCTGGATGGCATGGACACGGCTGGCCTaGAGTGCCGAGTCCAGGTGT +
Preference number: 4 (lower is better)
Translates to: IREKEIIPLKHKLGSWMAWTRLA*SAESRC
Trigger: ACACCTGGACTCGGCACTCCAGGCCAGCCGTGTCCA...TGCCATCCAGGACCCCAATTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp ACCGCAAAGGAGGTTTACCTAGGAGGTATGCTGTCCCAGACTGTAATTTCGCCCTGGACACGGCTGGCCTaGAGTGCCGAGTCCAGGTGT +
Preference number: 4 (lower is better)
Translates to: TAKEVYLGGMLSQTVISPWTRLA*SAESRC
Trigger: ACACCTGGACTCGGCACTCCAGGCCAGCCGTGTCCA...GGGCGAAATTACAGTCTGGGACAGCATACCTCCTAGGTAAACCTCCTTTGCGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550914.6
CDS-3UTR CCA 90 bp GGCCGCAGCACCATGGCAGAGGAGGAGAGTGCAGAAGTAGTTCTGCTTTCCCACTCATTAACTGGAACATaGTCTGCAGGGCATGGGCGC +
Preference number: 4 (lower is better)
Translates to: GRSTMAEEESAEVVLLSHSLTGT*SAGHGR
Trigger: GCGCCCATGCCCTGCAGACCATGTTCCAGTTAATGA...GTGGGAAAGCAGAACTACTTCTGCACTCTCCTCCTCTGCCATGGTGCTGCGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CCA 90 bp ACACACGCACGCACGCACACACACACACACACACCCAGCAGCCACAAGCGGCTCTTGGGAGTCATTAACTaGAACATGGTCTGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: THARTHTHTHTPSSHKRLLGVIN*NMVCRA
Trigger: TGCCCTGCAGACCATGTTCCAGTTAATGACTCCCAA...GAGCCGCTTGTGGCTGCTGGGTGTGTGTGTGTGTGTGTGCGTGCGTGCGTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp CACATCGGTGTGAGAAGCGCTGGTCTACAGCGATTCCACTTCACCATTCACTCTGCCAGGCCTCCAGGATaGCTGCCGCTTTGTCCTCGT +
Preference number: 4 (lower is better)
Translates to: HIGVRSAGLQRFHFTIHSARPPG*LPLCPR
Trigger: ACGAGGACAAAGCGGCAGCCATCCTGGAGGCCTGGC...AGAGTGAATGGTGAAGTGGAATCGCTGTAGACCAGCGCTTCTCACACCGATGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CCA 90 bp ATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATTGGGGTCCTGGATGGCAGCCAGGCCTCCAGGATaGCTGCCGCTTTGTCCTCGT +
Preference number: 4 (lower is better)
Translates to: IREKEIIPLKHKLGSWMAARPPG*LPLCPR
Trigger: ACGAGGACAAAGCGGCAGCCATCCTGGAGGCCTGGC...TGCCATCCAGGACCCCAATTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp TCAGATCCCGCCAGCATCAGCACTCCCAGCAGAGTGGACACGGCGCCATCCAGGAAAGCACCTTTTGAGTaGAGTTCTGTGCGACACTCT +
Preference number: 4 (lower is better)
Translates to: SDPASISTPSRVDTAPSRKAPFE*SSVRHS
Trigger: AGAGTGTCGCACAGAACTCCACTCAAAAGGTGCTTT...CCTGGATGGCGCCGTGTCCACTCTGCTGGGAGTGCTGATGCTGGCGGGATCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CCA 90 bp TCCTTGTGGCGCTGCACCGACCCTCCGCAGGTTAGCAGTGGGGGAAGAGAGCAGGTTTCACTGAAGGCGTaGGCCAGAAGAAAAACATCA +
Preference number: 4 (lower is better)
Translates to: SLWRCTDPPQVSSGGREQVSLKA*ARRKTS
Trigger: TGATGTTTTTCTTCTGGCCCACGCCTTCAGTGAAAC...CTGCTCTCTTCCCCCACTGCTAACCTGCGGAGGGTCGGTGCAGCGCCACAAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000430669.6
CDS-3UTR CCA 90 bp ACACGCACAGCCAAACAAGAGGACCGCACACAACGACACCTAGAGAAGCCACCACTGGAGTCGGAGAACTaGGAGAGCAGGTCCCTTGTG +
Preference number: 4 (lower is better)
Translates to: TRTAKQEDRTQRHLEKPPLESEN*ESRSLV
Trigger: CACAAGGGACCTGCTCTCCCAGTTCTCCGACTCCAG...TGGTGGCTTCTCTAGGTGTCGTTGTGTGCGGTCCTCTTGTTTGGCTGTGCGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp TCAGATCCCGCCAGCATCAGCACTCCCAGCAGAGTGGACACGGCGCCATCCAGGCACTACCTTGGCTTTTaGTTTCAAGAGGAAAGGAGC +
Preference number: 4 (lower is better)
Translates to: SDPASISTPSRVDTAPSRHYLGF*FQEERS
Trigger: GCTCCTTTCCTCTTGAAACCAAAAGCCAAGGTAGTG...CCTGGATGGCGCCGTGTCCACTCTGCTGGGAGTGCTGATGCTGGCGGGATCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CCA 90 bp TGGGGTCCTGGATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGACCATTCTGGTCGGTGTaGCCGGATGTTGGCCTGGGA +
Preference number: 4 (lower is better)
Translates to: WGPGWQPMIIRDAVDTRRPFWSV*PDVGLG
Trigger: TCCCAGGCCAACATCCGGCCACACCGACCAGAATGG...TCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCATCCAGGACCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp ATGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACGTCGTGGACCCATTCTaGTCGGTGTGGCCGGATGTT +
Preference number: 4 (lower is better)
Translates to: MAQPRLSTRHVTEFSNTHVVDPF*SVWPDV
Trigger: AACATCCGGCCACACCGACCAGAATGGGTCCACGAC...GTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp ATGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACACTGGGCATACTCGATaGGCTCTGCTGCCGGGATTC +
Preference number: 4 (lower is better)
Translates to: MAQPRLSTRHVTEFSNTHTGHTR*ALLPGF
Trigger: GAATCCCGGCAGCAGAGCCCATCGAGTATGCCCAGT...GTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp CGCCACCCTCCGTGTGCCCGACACAGCAGCATGGCAACGCCAGAAATGAACAAAGTTCAAGCCGTTGGCTaGAGACACCTCAGGATATGG +
Preference number: 4 (lower is better)
Translates to: RHPPCARHSSMATPEMNKVQAVG*RHLRIW
Trigger: CCATATCCTGAGGTGTCTCCAGCCAACGGCTTGAAC...TTTGTTCATTTCTGGCGTTGCCATGCTGCTGTGTCGGGCACACGGAGGGTGGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CCA 90 bp ATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAGTCTAGCTTTTCGAAGCGGACCACGCTaGGGGGTGGCTCAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: MAANDHKRCRRHEESLAFRSGPR*GVAQGR
Trigger: CCTCCCCTGAGCCACCCCCCAGCGTGGTCCGCTTCG...AAAAGCTAGACTCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp ATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAGTCTAGCTTTTGACCCGCTGTGCGTGTaGCCGGGCGGCATGGCGAAG +
Preference number: 4 (lower is better)
Translates to: MAANDHKRCRRHEESLAFDPLCV*PGGMAK
Trigger: CTTCGCCATGCCGCCCGGCCACACGCACAGCGGGTC...AAAAGCTAGACTCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp CCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATCCACGATCACTTGGTaGGCAGGGCCTCCCGCGCCC +
Preference number: 4 (lower is better)
Translates to: PASITMIREKEIIPLKHKSTITW*AGPPAP
Trigger: GGGCGCGGGAGGCCCTGCCCACCAAGTGATCGTGGA...TTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp CACATCGGTGTGAGAAGCGCTGGTCTACAGCGATTCCACTTCACCATTCACTCTGACCCTGAGTCCAGGTaGGGCTGCTGTCTCGGGTTC +
Preference number: 4 (lower is better)
Translates to: HIGVRSAGLQRFHFTIHSDPESR*GCCLGF
Trigger: GAACCCGAGACAGCAGCCCCACCTGGACTCAGGGTC...AGAGTGAATGGTGAAGTGGAATCGCTGTAGACCAGCGCTTCTCACACCGATGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CCA 90 bp ATGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCATGGCAGTGGACGCTaGGTTCCGAGGGTTGTGAGA +
Preference number: 4 (lower is better)
Translates to: MAQPRLSTRHVTEFSNTHHGSGR*VPRVVR
Trigger: TCTCACAACCCTCGGAACCCAGCGTCCACTGCCATG...GTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp AGCACAGCAAAGAAATACCTGGGAGATCAAGAGGAAACGGGAACACGCGCTGTGAGCTGCCCATGGCAGTaGACGCTGGGTTCCGAGGGT +
Preference number: 4 (lower is better)
Translates to: STAKKYLGDQEETGTRAVSCPWQ*TLGSEG
Trigger: ACCCTCGGAACCCAGCGTCCACTGCCATGGGCAGCT...CACAGCGCGTGTTCCCGTTTCCTCTTGATCTCCCAGGTATTTCTTTGCTGTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CCA 90 bp ATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATTGGGGTCCTGGATGGCACTCTCACACCGGACGTaGAAAGGCACGTGGGGGTCC +
Preference number: 4 (lower is better)
Translates to: IREKEIIPLKHKLGSWMALSHRT*KGTWGS
Trigger: GGACCCCCACGTGCCTTTCCACGTCCGGTGTGAGAG...TGCCATCCAGGACCCCAATTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp ATGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACTGGTGTGGATTTGGATaGGGAGCCGACACTGGGTGC +
Preference number: 4 (lower is better)
Translates to: MAQPRLSTRHVTEFSNTHWCGFG*GADTGC
Trigger: GCACCCAGTGTCGGCTCCCCATCCAAATCCACACCA...GTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp TGGGGTCCTGGATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAGCCAGGGACAGCCTCTaGCAGACACTCTGCATGGCT +
Preference number: 4 (lower is better)
Translates to: WGPGWQPMIIRDAVDTRRARDSL*QTLCMA
Trigger: AGCCATGCAGAGTGTCTGCCAGAGGCTGTCCCTGGC...TCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCATCCAGGACCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CCA 90 bp ACACGCACAGCCAAACAAGAGGACCGCACACAACGACACCTAGAGAAGCCACCAGGGAAGAGAGCAGTGTaGAGCTGGACTGGTTCCCCA +
Preference number: 4 (lower is better)
Translates to: TRTAKQEDRTQRHLEKPPGKRAV*SWTGSP
Trigger: TGGGGAACCAGTCCAGCTCCACACTGCTCTCTTCCC...TGGTGGCTTCTCTAGGTGTCGTTGTGTGCGGTCCTCTTGTTTGGCTGTGCGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430669.6
CDS-3UTR TCA 90 bp ATGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCGAAGGCCCCAAATATaGGGAGGCCCACAACCAAGA +
Preference number: 4 (lower is better)
Translates to: MAQPRLSTRHVTEFSNTHRRPQI*GGPQPR
Trigger: TCTTGGTTGTGGGCCTCCTCATATTTGGGGCCTTCG...GTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp TCCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAACTGGATCGGCCGGATTaGGGCAGGGGCGGTCCATGT +
Preference number: 4 (lower is better)
Translates to: SSIHHNDPREGDYPPEAQLDRPD*GRGGPC
Trigger: ACATGGACCGCCCCTGCCTCAATCCGGCCGATCCAG...TTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp CCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAACTGGATCGGCCGGATTaGGGCAGGGGCGGTCCATGT +
Preference number: 4 (lower is better)
Translates to: PASITMIREKEIIPLKHKLDRPD*GRGGPC
Trigger: ACATGGACCGCCCCTGCCTCAATCCGGCCGATCCAG...TTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp ATGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCCAGGGTCGTGGTGGTaGAGGAAAGCACCTTTTGAG +
Preference number: 4 (lower is better)
Translates to: MAQPRLSTRHVTEFSNTHPGSWW*RKAPFE
Trigger: CTCAAAAGGTGCTTTCCTTCACCACCACGACCCTGG...GTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp ACACACGCACGCACGCACACACACACACACACACCCAGCAGCCACAAGCGGCTCCTTCTCAGCAAAAGATaGGAGTGTCCACTTCGTACA +
Preference number: 4 (lower is better)
Translates to: THARTHTHTHTPSSHKRLLLSKR*ECPLRT
Trigger: TGTACGAAGTGGACACTCTCATCTTTTGCTGAGAAG...GAGCCGCTTGTGGCTGCTGGGTGTGTGTGTGTGTGTGTGCGTGCGTGCGTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp GGCTCAGGGGAGGGTGTGGGCAGGCGGTTCAAGCCGTTGGCTGGAGACACCTCAAGTCTGCTTTCTGGGTaGCTATATACATGTTGTAGA +
Preference number: 4 (lower is better)
Translates to: GSGEGVGRRFKPLAGDTSSLLSG*LYTCCR
Trigger: TCTACAACATGTATATAGTCACCCAGAAAGCAGACT...TGAGGTGTCTCCAGCCAACGGCTTGAACCGCCTGCCCACACCCTCCCCTGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR TCA 90 bp ACACACGCACGCACGCACACACACACACACACACCCAGCAGCCACAAGCGGCTCCATACTTCACGTTACTaGAACTCCTGTGTAGGTCGT +
Preference number: 4 (lower is better)
Translates to: THARTHTHTHTPSSHKRLHTSRY*NSCVGR
Trigger: ACGACCTACACAGGAGTTTCAGTAACGTGAAGTATG...GAGCCGCTTGTGGCTGCTGGGTGTGTGTGTGTGTGTGTGCGTGCGTGCGTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp TGGGGTCCTGGATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAGGCCACATCCACTCTTaGATTTGGGGGTGTTGGGGG +
Preference number: 4 (lower is better)
Translates to: WGPGWQPMIIRDAVDTRRGHIHS*IWGCWG
Trigger: CCCCCAACACCCCCAAATTCAAGAGTGGATGTGGCC...TCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCATCCAGGACCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp GAAGGCGGCCTCCATGATGCCAAATTGCCCAGTGGGCTATGCCACAGGCCAACCTTCCTTTCTACAGTTTaGAGGAGAGGGAGCGTAGGT +
Preference number: 4 (lower is better)
Translates to: EGGLHDAKLPSGLCHRPTFLSTV*RRGSVG
Trigger: ACCTACGCTCCCTCTCCTTCAAACTGTAGAAAGGAA...GGTTGGCCTGTGGCATAGCCCACTGGGCAATTTGGCATCATGGAGGCCGCCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR TCA 90 bp CGCCACCCTCCGTGTGCCCGACACAGCAGCATGGCAACGCCAGAAATGAACAAACCCTGGTTTTGCCTGTaGACTTGTCTCTCCCCTAAA +
Preference number: 4 (lower is better)
Translates to: RHPPCARHSSMATPEMNKPWFCL*TCLSPK
Trigger: TTTAGGGGAGAGACAAGTTCACAGGCAAAACCAGGG...TTTGTTCATTTCTGGCGTTGCCATGCTGCTGTGTCGGGCACACGGAGGGTGGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR TCA 90 bp GACACTGTCGTCTGGGAACTATACTCCGAGTCGGAGGAATCAGACCCGCTGTGCTTTCTAGGGCAACTCTaGTGGAAGTGGGCTGGGGTA +
Preference number: 4 (lower is better)
Translates to: DTVVWELYSESEESDPLCFLGQL*WKWAGV
Trigger: TACCCCAGCCCACTTCCATCAGAGTTGCCCTAGAAA...GCACAGCGGGTCTGATTCCTCCGACTCGGAGTATAGTTCCCAGACGACAGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR TCA 90 bp ACTCTGCATGGCTGGAGGGCACAGACTCCACGCAGGGATGCGTTTCTGGAACTACTGCTTTCCCACCATTaGGGGCTAAGGTCTGGAATC +
Preference number: 4 (lower is better)
Translates to: TLHGWRAQTPRRDAFLELLLSHH*GLRSGI
Trigger: GATTCCAGACCTTAGCCCTCAATGGTGGGAAAGCAG...TAGTTCCAGAAACGCATCCCTGCGTGGAGTCTGTGCCCTCCAGCCATGCAGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR TCA 90 bp AGCACAGCAAAGAAATACCTGGGAGATCAAGAGGAAACGGGAACACGCGCTGTGGAGGGGCCCCGCTCGTaGAAACCCAGCAGAAGCAAA +
Preference number: 4 (lower is better)
Translates to: STAKKYLGDQEETGTRAVEGPRS*KPSRSK
Trigger: TTTGCTTCTGCTGGGTTTTCACGAGCGGGGCCCCTC...CACAGCGCGTGTTCCCGTTTCCTCTTGATCTCCCAGGTATTTCTTTGCTGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR TCA 90 bp TGCCTGGATTCGGGATGGACCACAGTGGAGTGGGCGAAGACGGGGTTTTCTGTGCAAAACCCACCCCACTaGAAAGGCTGTTATCCAACC +
Preference number: 4 (lower is better)
Translates to: CLDSGWTTVEWAKTGFSVQNPPH*KGCYPT
Trigger: GGTTGGATAACAGCCTTTTCAGTGGGGTGGGTTTTG...CACAGAAAACCCCGTCTTCGCCCACTCCACTGTGGTCCATCCCGAATCCAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR TCA 90 bp AAGAGCACTAATGACGGGGAGGATGGAGACAATGTTTGGATTTACTTAGGAAGCAGTGGGGTGTGGGCCTaGGGTGTCCCTGGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: KSTNDGEDGDNVWIYLGSSGVWA*GVPGGC
Trigger: GCAGCCCCCAGGGACACCTCAGGCCCACACCCCACT...GCTTCCTAAGTAAATCCAAACATTGTCTCCATCCTCCCCGTCATTAGTGCTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000430669.6
CDS-3UTR GCA 90 bp TCCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAATGGGTTCGCGGTGGCTaGTCGGTCCCGGACTCTGCT +
Preference number: 4 (lower is better)
Translates to: SSIHHNDPREGDYPPEAQWVRGG*SVPDSA
Trigger: AGCAGAGTCCGGGACCGAGCAGCCACCGCGAACCCA...TTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331920.11
CDS-3UTR GCA 90 bp TCCTTGTGGCGCTGCACCGACCCTCCGCAGGTTAGCAGTGGGGGAAGAGAGCAGAACTCCTCCTGCCAGTaGATATACTTTCTGGATAAG +
Preference number: 4 (lower is better)
Translates to: SLWRCTDPPQVSSGGREQNSSCQ*IYFLDK
Trigger: CTTATCCAGAAAGTATATGCACTGGCAGGAGGAGTT...CTGCTCTCTTCCCCCACTGCTAACCTGCGGAGGGTCGGTGCAGCGCCACAAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430669.6
CDS-3UTR GCA 90 bp CGGGGTTTTCTGTGGCTTCCACGATCACTTGGTGGGCAGGGCCTCCCGCGCCCTCAAAACCTGAGTTGTTaGAGCGTTAAAGGAAATTCC +
Preference number: 4 (lower is better)
Translates to: RGFLWLPRSLGGQGLPRPQNLSC*SVKGNS
Trigger: GGAATTTCCTTTAACGCTGCAACAACTCAGGTTTTG...AGGGCGCGGGAGGCCCTGCCCACCAAGTGATCGTGGAAGCCACAGAAAACCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR GCA 90 bp GGGGCTGCTTGTGACCTCTCCCTTCATCTGGGGGCTGGTTACACGGATGCGTTCGACTGCATGGTAATCTaGGTTTCATGGGCAAAGCTG +
Preference number: 4 (lower is better)
Translates to: GAACDLSLHLGAGYTDAFDCMVI*VSWAKL
Trigger: CAGCTTTGCCCATGAAACGCAGATTACCATGCAGTC...GAACGCATCCGTGTAACCAGCCCCCAGATGAAGGGAGAGGTCACAAGCAGCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430669.6
CDS-3UTR GCA 90 bp ACACGCACAGCCAAACAAGAGGACCGCACACAACGACACCTAGAGAAGCCACCAATACTCGATGGGCTCTaGTGCCGGGATTCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: TRTAKQEDRTQRHLEKPPILDGL*CRDSQP
Trigger: AGGCTGAGAATCCCGGCAGCAGAGCCCATCGAGTAT...TGGTGGCTTCTCTAGGTGTCGTTGTGTGCGGTCCTCTTGTTTGGCTGTGCGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp ATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATTGGGGTCCTGGATGGCAGCCATCCAGGACGGGTaGAAACATGTGCTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: IREKEIIPLKHKLGSWMAAIQDG*KHVLQG
Trigger: GCCCTGGAGCACATGTTTGCACCCGTCCTGGATGGC...TGCCATCCAGGACCCCAATTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp TGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCTCGCATTCCACGTCCTaGAGCTCAATGACTTCCACC +
Preference number: 4 (lower is better)
Translates to: WPSQGSALGMSPNSLTPTSHSTS*SSMTST
Trigger: GGTGGAAGTCATTGAGCTGCAGGACGTGGAATGCGA...GGTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp GAAGGCGGCCTCCATGATGCCAAATTGCCCAGTGGGCTATGCCACAGGCCAACCACAGTAACAATGAACTaGTGTCCTGGCACAGGGCAT +
Preference number: 4 (lower is better)
Translates to: EGGLHDAKLPSGLCHRPTTVTMN*CPGTGH
Trigger: ATGCCCTGTGCCAGGACAGCAGTTCATTGTTACTGT...GGTTGGCCTGTGGCATAGCCCACTGGGCAATTTGGCATCATGGAGGCCGCCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR GCA 90 bp TGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCGGTCTGAGGTCACTATaGTGTGGGTATTTCTGGGGG +
Preference number: 4 (lower is better)
Translates to: WPSQGSALGMSPNSLTPTGLRSL*CGYFWG
Trigger: CCCCCAGAAATACCCACAGCATAGTGACCTCAGACC...GGTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp TGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCGAAAGTTCTACACCATaGAGAAATCAGGGGCCGCGC +
Preference number: 4 (lower is better)
Translates to: WPSQGSALGMSPNSLTPTESSTP*RNQGPR
Trigger: GCGCGGCCCCTGATTTCTGCATGGTGTAGAACTTTC...GGTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp CGCCACCCTCCGTGTGCCCGACACAGCAGCATGGCAACGCCAGAAATGAACAAACTCCTTGCACACGCCTaGTTACCTGACAATGAAGTC +
Preference number: 4 (lower is better)
Translates to: RHPPCARHSSMATPEMNKLLAHA*LPDNEV
Trigger: GACTTCATTGTCAGGTAAGCAGGCGTGTGCAAGGAG...TTTGTTCATTTCTGGCGTTGCCATGCTGCTGTGTCGGGCACACGGAGGGTGGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR GCA 90 bp CGCCACCCTCCGTGTGCCCGACACAGCAGCATGGCAACGCCAGAAATGAACAAACTGCAAAGAAAATGCTaGCCATTCTGTGGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: RHPPCARHSSMATPEMNKLQRKC*PFCGSW
Trigger: CCAGCTCCCACAGAATGGGCAGCATTTTCTTTGCAG...TTTGTTCATTTCTGGCGTTGCCATGCTGCTGTGTCGGGCACACGGAGGGTGGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR GCA 90 bp ACACGCACAGCCAAACAAGAGGACCGCACACAACGACACCTAGAGAAGCCACCACCTTGTCCTCCTCTTTaGCTGGCTCTAGGTCCCTTG +
Preference number: 4 (lower is better)
Translates to: TRTAKQEDRTQRHLEKPPPCPPL*LALGPL
Trigger: CAAGGGACCTAGAGCCAGGCAAAGAGGAGGACAAGG...TGGTGGCTTCTCTAGGTGTCGTTGTGTGCGGTCCTCTTGTTTGGCTGTGCGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430669.6
CDS-3UTR CCA 90 bp ACACACGCACGCACGCACACACACACACACACACCCAGCAGCCACAAGCGGCTCAGAACTCTCTCCATTTaGAGAAAGAAGAGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: THARTHTHTHTPSSHKRLRTLSI*RKKRRR
Trigger: CCTCCTCCTCTTCTTTCTCCAAATGGAGAGAGTTCT...GAGCCGCTTGTGGCTGCTGGGTGTGTGTGTGTGTGTGTGCGTGCGTGCGTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331920.11
CDS-3UTR CCA 90 bp ATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAGTCTAGCTTTTTCGGGCTCTGGCTGCTaGGTTCGCGGTGGCTGCTCG +
Preference number: 4 (lower is better)
Translates to: MAANDHKRCRRHEESLAFSGSGC*VRGGCS
Trigger: CGAGCAGCCACCGCGAACCCAGCAGCCAGAGCCCGA...AAAAGCTAGACTCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331920.11
CDS-3UTR CCA 90 bp ATGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACACAGCTCCTCCACGTTaGTCTCGAGGTTCGCTGCTT +
Preference number: 4 (lower is better)
Translates to: MAQPRLSTRHVTEFSNTHTAPPR*SRGSLL
Trigger: AAGCAGCGAACCTCGAGACCAACGTGGAGGAGCTGT...GTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp ATGATGCCATCTGCATCCACCAGACGCTGTTTAGTCAACTGGCTGATGTCGATGTGGACACGGCTGGCCTaGAGTGCCGAGTCCAGGTGT +
Preference number: 4 (lower is better)
Translates to: MMPSASTRRCLVNWLMSMWTRLA*SAESRC
Trigger: ACACCTGGACTCGGCACTCCAGGCCAGCCGTGTCCA...CATCGACATCAGCCAGTTGACTAAACAGCGTCTGGTGGATGCAGATGGCATCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CCA 90 bp GTTCCAATTTCCACTGCCTGTTGTACATGTATACATGGACACGGCTGGCCTGGATGGACACGGCTGGCCTaGAGTGCCGAGTCCAGGTGT +
Preference number: 4 (lower is better)
Translates to: VPISTACCTCIHGHGWPGWTRLA*SAESRC
Trigger: ACACCTGGACTCGGCACTCCAGGCCAGCCGTGTCCA...TCCAGGCCAGCCGTGTCCATGTATACATGTACAACAGGCAGTGGAAATTGGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551623.1
CDS-3UTR CCA 90 bp ACACACGCACGCACGCACACACACACACACACACCCAGCAGCCACAAGCGGCTCACCAAGAGCGAGAAATaGCAAAACCTGAGTTGTTGC +
Preference number: 4 (lower is better)
Translates to: THARTHTHTHTPSSHKRLTKSEK*QNLSCC
Trigger: GCAACAACTCAGGTTTTGCCATTTCTCGCTCTTGGT...GAGCCGCTTGTGGCTGCTGGGTGTGTGTGTGTGTGTGTGCGTGCGTGCGTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp ATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATTGGGGTCCTGGATGGCAACTACTACCGCTGCCTaGAGGGAGAACGCCCGCAGA +
Preference number: 4 (lower is better)
Translates to: IREKEIIPLKHKLGSWMATTTAA*RENARR
Trigger: TCTGCGGGCGTTCTCCCTCCAGGCAGCGGTAGTAGT...TGCCATCCAGGACCCCAATTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331920.11
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp ATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATTGGGGTCCTGGATGGCAGCTGCTGTAGGGAGGTaGGGGGCTGTAGCGGGTATT +
Preference number: 4 (lower is better)
Translates to: IREKEIIPLKHKLGSWMAAAVGR*GAVAGI
Trigger: AATACCCGCTACAGCCCCCCACCTCCCTACAGCAGC...TGCCATCCAGGACCCCAATTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp ACACGCACAGCCAAACAAGAGGACCGCACACAACGACACCTAGAGAAGCCACCATACTCCGTGCGGAGCTaGACAGTGGACTGCATGGTA +
Preference number: 4 (lower is better)
Translates to: TRTAKQEDRTQRHLEKPPYSVRS*TVDCMV
Trigger: TACCATGCAGTCCACTGTCCAGCTCCGCACGGAGTA...TGGTGGCTTCTCTAGGTGTCGTTGTGTGCGGTCCTCTTGTTTGGCTGTGCGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp ATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATTGGGGTCCTGGATGGCAAGCGCGGCTCAGCGGTaGTGTAGTACACGTGCGTGT +
Preference number: 4 (lower is better)
Translates to: IREKEIIPLKHKLGSWMASAAQR*CSTRAC
Trigger: ACACGCACGTGTACTACACCACCGCTGAGCCGCGCT...TGCCATCCAGGACCCCAATTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp CACATCGGTGTGAGAAGCGCTGGTCTACAGCGATTCCACTTCACCATTCACTCTAGAGCAGGTCCCTTGTaGAGCTGGTGCTCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: HIGVRSAGLQRFHFTIHSRAGPL*SWCSLG
Trigger: GCCCAGAGAGCACCAGCTCCACAAGGGACCTGCTCT...AGAGTGAATGGTGAAGTGGAATCGCTGTAGACCAGCGCTTCTCACACCGATGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CCA 90 bp CCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAAGGCCGGATGTTGGCCTaGGAGGCAGCATACGCGACG +
Preference number: 4 (lower is better)
Translates to: PASITMIREKEIIPLKHKGRMLA*EAAYAT
Trigger: CGTCGCGTATGCTGCCTCCCAGGCCAACATCCGGCC...TTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp TGGGGTCCTGGATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAGTCGTGGACCCATTCTaGTCGGTGTGGCCGGATGTT +
Preference number: 4 (lower is better)
Translates to: WGPGWQPMIIRDAVDTRRVVDPF*SVWPDV
Trigger: AACATCCGGCCACACCGACCAGAATGGGTCCACGAC...TCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCATCCAGGACCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp TGGGGTCCTGGATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAAGCCGTTGGGGTAACTaGACAGCCCCAGGCTCGTAT +
Preference number: 4 (lower is better)
Translates to: WGPGWQPMIIRDAVDTRRSRWGN*TAPGSY
Trigger: ATACGAGCCTGGGGCTGTCCAGTTACCCCAACGGCT...TCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCATCCAGGACCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp ATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATTGGGGTCCTGGATGGCAAACAGCAGCAGCCAGTaGCGGAGGCCGATGTACTGC +
Preference number: 4 (lower is better)
Translates to: IREKEIIPLKHKLGSWMANSSSQ*RRPMYC
Trigger: GCAGTACATCGGCCTCCGCCACTGGCTGCTGCTGTT...TGCCATCCAGGACCCCAATTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp ATGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACGGTTCTTGTCGCCGATaGCCGTCAGAAAGGCCAAAG +
Preference number: 4 (lower is better)
Translates to: MAQPRLSTRHVTEFSNTHGSCRR*PSERPK
Trigger: CTTTGGCCTTTCTGACGGCCATCGGCGACAAGAACC...GTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp TGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCCCTGACACTGTCGTCTaGGAACTATACTCCGAGTCG +
Preference number: 4 (lower is better)
Translates to: WPSQGSALGMSPNSLTPTPDTVV*ELYSES
Trigger: CGACTCGGAGTATAGTTCCCAGACGACAGTGTCAGG...GGTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp TCGGGGATGCCGAGAACCCCAGGAGAACCTTGTCCTCCTCTTTGCCTGGCTCTAAGACGGGGTTTTCTGTaGCTTCCACGATCACTTGGT +
Preference number: 4 (lower is better)
Translates to: SGMPRTPGEPCPPLCLALRRGFL*LPRSLG
Trigger: ACCAAGTGATCGTGGAAGCCACAGAAAACCCCGTCT...TAGAGCCAGGCAAAGAGGAGGACAAGGTTCTCCTGGGGTTCTCGGCATCCCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000430669.6
CDS-3UTR CCA 90 bp ATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATTGGGGTCCTGGATGGCATGCCTGGATTCGGGATaGACCACAGTGGAGTGGGCG +
Preference number: 4 (lower is better)
Translates to: IREKEIIPLKHKLGSWMACLDSG*TTVEWA
Trigger: CGCCCACTCCACTGTGGTCCATCCCGAATCCAGGCA...TGCCATCCAGGACCCCAATTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp AGCACAGCAAAGAAATACCTGGGAGATCAAGAGGAAACGGGAACACGCGCTGTGTCTCGGGTTCGAGGGTaGGTGATGCCTGGATTCGGG +
Preference number: 4 (lower is better)
Translates to: STAKKYLGDQEETGTRAVSRVRG*VMPGFG
Trigger: CCCGAATCCAGGCATCACCCACCCTCGAACCCGAGA...CACAGCGCGTGTTCCCGTTTCCTCTTGATCTCCCAGGTATTTCTTTGCTGTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CCA 90 bp ATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATTGGGGTCCTGGATGGCATCTCGGGTTCGAGGGTaGGTGATGCCTGGATTCGGG +
Preference number: 4 (lower is better)
Translates to: IREKEIIPLKHKLGSWMASRVRG*VMPGFG
Trigger: CCCGAATCCAGGCATCACCCACCCTCGAACCCGAGA...TGCCATCCAGGACCCCAATTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp CCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAAAGTCTCAGGGTAGCCTaGGCAGAGTCCCCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: PASITMIREKEIIPLKHKSLRVA*AESPSG
Trigger: CCCCGAGGGGGACTCTGCCCAGGCTACCCTGAGACT...TTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp ATGATGCCATCTGCATCCACCAGACGCTGTTTAGTCAACTGGCTGATGTCGATGCTCTCACACCGGACGTaGAAAGGCACGTGGGGGTCC +
Preference number: 4 (lower is better)
Translates to: MMPSASTRRCLVNWLMSMLSHRT*KGTWGS
Trigger: GGACCCCCACGTGCCTTTCCACGTCCGGTGTGAGAG...CATCGACATCAGCCAGTTGACTAAACAGCGTCTGGTGGATGCAGATGGCATCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CCA 90 bp GGGGCTGCTTGTGACCTCTCCCTTCATCTGGGGGCTGGTTACACGGATGCGTTCAAGACTAATGAAGCTTaGTTGTGGCACGGAGCCCAA +
Preference number: 4 (lower is better)
Translates to: GAACDLSLHLGAGYTDAFKTNEA*LWHGAQ
Trigger: TTGGGCTCCGTGCCACAACCAAGCTTCATTAGTCTT...GAACGCATCCGTGTAACCAGCCCCCAGATGAAGGGAGAGGTCACAAGCAGCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430669.6
CDS-3UTR CCA 90 bp ATGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACGGGTCGTGTGTGTGTTaGTCAGAAGAGGGGCACCAT +
Preference number: 4 (lower is better)
Translates to: MAQPRLSTRHVTEFSNTHGSCVC*SEEGHH
Trigger: ATGGTGCCCCTCTTCTGACCAACACACACACGACCC...GTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp TGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCAACAAGGTGCTGGTGTaGATTTGGATGGGGAGCCGA +
Preference number: 4 (lower is better)
Translates to: WPSQGSALGMSPNSLTPTNKVLV*IWMGSR
Trigger: TCGGCTCCCCATCCAAATCCACACCAGCACCTTGTT...GGTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp TGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCGAGGTCACTATGCTGTaGGTATTTCTGGGGGCCCAT +
Preference number: 4 (lower is better)
Translates to: WPSQGSALGMSPNSLTPTEVTML*VFLGAH
Trigger: ATGGGCCCCCAGAAATACCCACAGCATAGTGACCTC...GGTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp ACACGCACAGCCAAACAAGAGGACCGCACACAACGACACCTAGAGAAGCCACCAGGATGGCAGACCATGTaGGTGACAGGCACCAAGACA +
Preference number: 4 (lower is better)
Translates to: TRTAKQEDRTQRHLEKPPGWQTM*VTGTKT
Trigger: TGTCTTGGTGCCTGTCACCCACATGGTCTGCCATCC...TGGTGGCTTCTCTAGGTGTCGTTGTGTGCGGTCCTCTTGTTTGGCTGTGCGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp TCAGATCCCGCCAGCATCAGCACTCCCAGCAGAGTGGACACGGCGCCATCCAGGGGGCAACTCTCTACTTaGTATTGGCAAACAGGAATT +
Preference number: 4 (lower is better)
Translates to: SDPASISTPSRVDTAPSRGQLST*YWQTGI
Trigger: AATTCCTGTTTGCCAATACCAAGTAGAGAGTTGCCC...CCTGGATGGCGCCGTGTCCACTCTGCTGGGAGTGCTGATGCTGGCGGGATCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CCA 90 bp ACACACGCACGCACGCACACACACACACACACACCCAGCAGCCACAAGCGGCTCTCTAATGTAAACTGCTaGAACTTTCGGCTGGGGCAT +
Preference number: 4 (lower is better)
Translates to: THARTHTHTHTPSSHKRLSNVNC*NFRLGH
Trigger: ATGCCCCAGCCGAAAGTTCCAGCAGTTTACATTAGA...GAGCCGCTTGTGGCTGCTGGGTGTGTGTGTGTGTGTGTGCGTGCGTGCGTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CCA 90 bp CACATCGGTGTGAGAAGCGCTGGTCTACAGCGATTCCACTTCACCATTCACTCTGGCAGACACTCTGCATaGCTGGAGGGCACAGACTCC +
Preference number: 4 (lower is better)
Translates to: HIGVRSAGLQRFHFTIHSGRHSA*LEGTDS
Trigger: GGAGTCTGTGCCCTCCAGCCATGCAGAGTGTCTGCC...AGAGTGAATGGTGAAGTGGAATCGCTGTAGACCAGCGCTTCTCACACCGATGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CCA 90 bp TGGGGTCCTGGATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAGGCTGCCCTTGTCAGTaGCACTCACCTCAGTTGGAG +
Preference number: 4 (lower is better)
Translates to: WGPGWQPMIIRDAVDTRRGCPCQ*HSPQLE
Trigger: CTCCAACTGAGGTGAGTGCCACTGACAAGGGCAGCC...TCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCATCCAGGACCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430669.6
CDS-3UTR CCA 90 bp TCGGGGATGCCGAGAACCCCAGGAGAACCTTGTCCTCCTCTTTGCCTGGCTCTAAGTGTGGAGCTGGACTaGTTCCCCAAGGATGACAAA +
Preference number: 4 (lower is better)
Translates to: SGMPRTPGEPCPPLCLALSVELD*FPKDDK
Trigger: TTTGTCATCCTTGGGGAACCAGTCCAGCTCCACACT...TAGAGCCAGGCAAAGAGGAGGACAAGGTTCTCCTGGGGTTCTCGGCATCCCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000430669.6
CDS-3UTR TCA 90 bp TGGGGTCCTGGATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGACGAAGGCCCCAAATATaGGGAGGCCCACAACCAAGA +
Preference number: 4 (lower is better)
Translates to: WGPGWQPMIIRDAVDTRRRRPQI*GGPQPR
Trigger: TCTTGGTTGTGGGCCTCCTCATATTTGGGGCCTTCG...TCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCATCCAGGACCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp ACTCTGCATGGCTGGAGGGCACAGACTCCACGCAGGGATGCGTTTCTGGAACTATTCCAGTGCTGTTCTTaGCTGTGCCACCCACAATCA +
Preference number: 4 (lower is better)
Translates to: TLHGWRAQTPRRDAFLELFQCCS*LCHPQS
Trigger: TGATTGTGGGTGGCACAGTCAAGAACAGCACTGGAA...TAGTTCCAGAAACGCATCCCTGCGTGGAGTCTGTGCCCTCCAGCCATGCAGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR TCA 90 bp GGCCGCAGCACCATGGCAGAGGAGGAGAGTGCAGAAGTAGTTCTGCTTTCCCACCATACTCGTACCCCTTaGAGTGCTCGTACATTTGCT +
Preference number: 4 (lower is better)
Translates to: GRSTMAEEESAEVVLLSHHTRTP*SARTFA
Trigger: AGCAAATGTACGAGCACTTCAAGGGGTACGAGTATG...GTGGGAAAGCAGAACTACTTCTGCACTCTCCTCCTCTGCCATGGTGCTGCGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR TCA 90 bp ATGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACTCTGTCCTGTTTCACTaGAGGCGTGGGCCAGAAGAA +
Preference number: 4 (lower is better)
Translates to: MAQPRLSTRHVTEFSNTHSVLFH*RRGPEE
Trigger: TTCTTCTGGCCCACGCCTTCAGTGAAACAGGACAGA...GTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp GGGGCTGCTTGTGACCTCTCCCTTCATCTGGGGGCTGGTTACACGGATGCGTTCCTTCTCAGCAAAAGATaGGAGTGTCCACTTCGTACA +
Preference number: 4 (lower is better)
Translates to: GAACDLSLHLGAGYTDAFLLSKR*ECPLRT
Trigger: TGTACGAAGTGGACACTCTCATCTTTTGCTGAGAAG...GAACGCATCCGTGTAACCAGCCCCCAGATGAAGGGAGAGGTCACAAGCAGCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000430669.6
CDS-3UTR TCA 90 bp CAGAGTTCTATCCAAGAGCAGGTCCCTCACAAAGCCATGGAGGCTGCTCAAAGATGGTGCCATAAAGGCTaGCCCCCAGCAAGCCCAGAA +
Preference number: 4 (lower is better)
Translates to: QSSIQEQVPHKAMEAAQRWCHKG*PPASPE
Trigger: TTCTGGGCTTGCTGGGGGTCAGCCTTTATGGCACCA...TCTTTGAGCAGCCTCCATGGCTTTGTGAGGGACCTGCTCTTGGATAGAACTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR TCA 90 bp GGGGCTGCTTGTGACCTCTCCCTTCATCTGGGGGCTGGTTACACGGATGCGTTCCATACTTCACGTTACTaGAACTCCTGTGTAGGTCGT +
Preference number: 4 (lower is better)
Translates to: GAACDLSLHLGAGYTDAFHTSRY*NSCVGR
Trigger: ACGACCTACACAGGAGTTTCAGTAACGTGAAGTATG...GAACGCATCCGTGTAACCAGCCCCCAGATGAAGGGAGAGGTCACAAGCAGCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430669.6
CDS-3UTR TCA 90 bp ACACACGCACGCACGCACACACACACACACACACCCAGCAGCCACAAGCGGCTCTGTAATTGTTTGGCATaGTTTTCCCGGTTTCCCAGT +
Preference number: 4 (lower is better)
Translates to: THARTHTHTHTPSSHKRLCNCLA*FSRFPS
Trigger: ACTGGGAAACCGGGAAAATCATGCCAAACAATTACA...GAGCCGCTTGTGGCTGCTGGGTGTGTGTGTGTGTGTGTGCGTGCGTGCGTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp CAGAGTTCTATCCAAGAGCAGGTCCCTCACAAAGCCATGGAGGCTGCTCAAAGATGTCCCGCAAGCCGTTaGGGTAGAAAGGGAACTGGG +
Preference number: 4 (lower is better)
Translates to: QSSIQEQVPHKAMEAAQRCPASR*GRKGTG
Trigger: CCCAGTTCCCTTTCTACCTCAACGGCTTGCGGGACA...TCTTTGAGCAGCCTCCATGGCTTTGTGAGGGACCTGCTCTTGGATAGAACTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR TCA 90 bp TCCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAACCAGGACCATCACAATaGTCCCGGCCGTCCAGGGGT +
Preference number: 4 (lower is better)
Translates to: SSIHHNDPREGDYPPEAQPGPSQ*SRPSRG
Trigger: ACCCCTGGACGGCCGGGATCATTGTGATGGTCCTGG...TTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp ACACGCACAGCCAAACAAGAGGACCGCACACAACGACACCTAGAGAAGCCACCAAAGGCCAAAGCAACGTaGACGGTGAACTCCACTCCT +
Preference number: 4 (lower is better)
Translates to: TRTAKQEDRTQRHLEKPPKAKAT*TVNSTP
Trigger: AGGAGTGGAGTTCACCGTTCACGTTGCTTTGGCCTT...TGGTGGCTTCTCTAGGTGTCGTTGTGTGCGGTCCTCTTGTTTGGCTGTGCGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp CCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAAGCCGAAGCTCCTCGCTaGGGCCTGACACTGTCGTCT +
Preference number: 4 (lower is better)
Translates to: PASITMIREKEIIPLKHKAEAPR*GLTLSS
Trigger: AGACGACAGTGTCAGGCCTCAGCGAGGAGCTTCGGC...TTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp CCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAAGGGTTCGAGGGTGGGTaGTGCCTGGATTCGGGATGG +
Preference number: 4 (lower is better)
Translates to: PASITMIREKEIIPLKHKGFEGG*CLDSGW
Trigger: CCATCCCGAATCCAGGCATCACCCACCCTCGAACCC...TTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp TGGGGTCCTGGATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGACGTCCTGCAGCTCAATaGCTTCCACCTTCGAATCCC +
Preference number: 4 (lower is better)
Translates to: WGPGWQPMIIRDAVDTRRRPAAQ*LPPSNP
Trigger: GGGATTCGAAGGTGGAAGTCATTGAGCTGCAGGACG...TCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCATCCAGGACCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp TGCCTGGATTCGGGATGGACCACAGTGGAGTGGGCGAAGACGGGGTTTTCTGTGCAGTACAGTACATGGTaGACTCACACACGTGTTCAC +
Preference number: 4 (lower is better)
Translates to: CLDSGWTTVEWAKTGFSVQYSTW*THTRVH
Trigger: GTGAACACGTGTGTGAGTTCACCATGTACTGTACTG...CACAGAAAACCCCGTCTTCGCCCACTCCACTGTGGTCCATCCCGAATCCAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR TCA 90 bp TCGGGGATGCCGAGAACCCCAGGAGAACCTTGTCCTCCTCTTTGCCTGGCTCTACATGATGAACTGATGTaGGCTCCATACCCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: SGMPRTPGEPCPPLCLALHDELM*APYPEV
Trigger: AACCTCAGGGTATGGAGCTCACATCAGTTCATCATG...TAGAGCCAGGCAAAGAGGAGGACAAGGTTCTCCTGGGGTTCTCGGCATCCCCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430669.6
CDS-3UTR TCA 90 bp GACACTGTCGTCTGGGAACTATACTCCGAGTCGGAGGAATCAGACCCGCTGTGCATATGGAATGCGACCTaGATGGCTGGGCAGACTGAA +
Preference number: 4 (lower is better)
Translates to: DTVVWELYSESEESDPLCIWNAT*MAGQTE
Trigger: TTCAGTCTGCCCAGCCATTCAGGTCGCATTCCATAT...GCACAGCGGGTCTGATTCCTCCGACTCGGAGTATAGTTCCCAGACGACAGTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR TCA 90 bp ATGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACTCCCGACAATATTTGTaGTCGGAAGAGGGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: MAQPRLSTRHVTEFSNTHSRQYL*SEEGSH
Trigger: GTGGCTGCCCTCTTCCGATCACAAATATTGTCGGGA...GTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429896.6
CDS-3UTR GCA 90 bp ACACACGCACGCACGCACACACACACACACACACCCAGCAGCCACAAGCGGCTCACAATCAACTCCTCCTaGCAGTGCATATACTTTCTG +
Preference number: 4 (lower is better)
Translates to: THARTHTHTHTPSSHKRLTINSS*QCIYFL
Trigger: CAGAAAGTATATGCACTGGCAGGAGGAGTTGATTGT...GAGCCGCTTGTGGCTGCTGGGTGTGTGTGTGTGTGTGTGCGTGCGTGCGTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp ATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATTGGGGTCCTGGATGGCAAACTGGAACATGGTCTaGAGGGCATGGGCGCTGACG +
Preference number: 4 (lower is better)
Translates to: IREKEIIPLKHKLGSWMANWNMV*RAWALT
Trigger: CGTCAGCGCCCATGCCCTGCAGACCATGTTCCAGTT...TGCCATCCAGGACCCCAATTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp TCGGGGATGCCGAGAACCCCAGGAGAACCTTGTCCTCCTCTTTGCCTGGCTCTATCGTACCCCTTGAAGTaGTCGTACATTTGCTTGGGA +
Preference number: 4 (lower is better)
Translates to: SGMPRTPGEPCPPLCLALSYPLK*SYICLG
Trigger: TCCCAAGCAAATGTACGAGCACTTCAAGGGGTACGA...TAGAGCCAGGCAAAGAGGAGGACAAGGTTCTCCTGGGGTTCTCGGCATCCCCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000430669.6
CDS-3UTR GCA 90 bp TGCCTGGATTCGGGATGGACCACAGTGGAGTGGGCGAAGACGGGGTTTTCTGTGAGCTGGACAGTGGACTaGATGGTAATCTGCGTTTCA +
Preference number: 4 (lower is better)
Translates to: CLDSGWTTVEWAKTGFSVSWTVD*MVICVS
Trigger: TGAAACGCAGATTACCATGCAGTCCACTGTCCAGCT...CACAGAAAACCCCGTCTTCGCCCACTCCACTGTGGTCCATCCCGAATCCAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR GCA 90 bp TCCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAGGGGGTCGTACTCCGTaGGGAGCTGGACAGTGGACT +
Preference number: 4 (lower is better)
Translates to: SSIHHNDPREGDYPPEAQGGRTP*GAGQWT
Trigger: AGTCCACTGTCCAGCTCCGCACGGAGTACGACCCCC...TTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp ATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATTGGGGTCCTGGATGGCATGGGCTTATCGCGGCTaGCGGTTTGCACCAGGAGTT +
Preference number: 4 (lower is better)
Translates to: IREKEIIPLKHKLGSWMAWAYRG*RFAPGV
Trigger: AACTCCTGGTGCAAACCGGCAGCCGCGATAAGCCCA...TGCCATCCAGGACCCCAATTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp ATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATTGGGGTCCTGGATGGCACTCGATGGGCTCTGCTaGCGGGATTCTCAGCCTTGT +
Preference number: 4 (lower is better)
Translates to: IREKEIIPLKHKLGSWMALDGLC*RDSQPC
Trigger: ACAAGGCTGAGAATCCCGGCAGCAGAGCCCATCGAG...TGCCATCCAGGACCCCAATTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp TGGGGTCCTGGATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAATACTCGATGGGCTCTaGTGCCGGGATTCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: WGPGWQPMIIRDAVDTRRILDGL*CRDSQP
Trigger: AGGCTGAGAATCCCGGCAGCAGAGCCCATCGAGTAT...TCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCATCCAGGACCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp AGCACAGCAAAGAAATACCTGGGAGATCAAGAGGAAACGGGAACACGCGCTGTGACGGGTGCAAACATGTaGTCCAGGGCAAGCACAGCC +
Preference number: 4 (lower is better)
Translates to: STAKKYLGDQEETGTRAVTGANM*SRASTA
Trigger: GGCTGTGCTTGCCCTGGAGCACATGTTTGCACCCGT...CACAGCGCGTGTTCCCGTTTCCTCTTGATCTCCCAGGTATTTCTTTGCTGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR GCA 90 bp AAGAGCACTAATGACGGGGAGGATGGAGACAATGTTTGGATTTACTTAGGAAGCAGCCGGGCACGGAGCTaGCCATGGCAGTGGACGCTG +
Preference number: 4 (lower is better)
Translates to: KSTNDGEDGDNVWIYLGSSRARS*PWQWTL
Trigger: CAGCGTCCACTGCCATGGGCAGCTCCGTGCCCGGCT...GCTTCCTAAGTAAATCCAAACATTGTCTCCATCCTCCCCGTCATTAGTGCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp ACACGCACAGCCAAACAAGAGGACCGCACACAACGACACCTAGAGAAGCCACCAGAAAGTTCTACACCATaGAGAAATCAGGGGCCGCGC +
Preference number: 4 (lower is better)
Translates to: TRTAKQEDRTQRHLEKPPESSTP*RNQGPR
Trigger: GCGCGGCCCCTGATTTCTGCATGGTGTAGAACTTTC...TGGTGGCTTCTCTAGGTGTCGTTGTGTGCGGTCCTCTTGTTTGGCTGTGCGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp CACATCGGTGTGAGAAGCGCTGGTCTACAGCGATTCCACTTCACCATTCACTCTCTCTGGCAGACACTCTaGATGGCTGGAGGGCACAGA +
Preference number: 4 (lower is better)
Translates to: HIGVRSAGLQRFHFTIHSLWQTL*MAGGHR
Trigger: TCTGTGCCCTCCAGCCATGCAGAGTGTCTGCCAGAG...AGAGTGAATGGTGAAGTGGAATCGCTGTAGACCAGCGCTTCTCACACCGATGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR GCA 90 bp CCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAAGGAGCTGGGGCATTGTaGTGGGTGAGGGCACTCCAC +
Preference number: 4 (lower is better)
Translates to: PASITMIREKEIIPLKHKGAGAL*WVRALH
Trigger: GTGGAGTGCCCTCACCCAGCACAATGCCCCAGCTCC...TTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CCA 90 bp ATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATTGGGGTCCTGGATGGCAATACATGGACACGGCTaGCCTGGAGTGCCGAGTCCA +
Preference number: 4 (lower is better)
Translates to: IREKEIIPLKHKLGSWMAIHGHG*PGVPSP
Trigger: TGGACTCGGCACTCCAGGCCAGCCGTGTCCATGTAT...TGCCATCCAGGACCCCAATTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp CGCAAAGGAGGTTTACCTAGGAGGTATGCTGTCCCAGACTGTAATTTCGCCCCTATACATGGACACGGCTaGCCTGGAGTGCCGAGTCCA +
Preference number: 4 (lower is better)
Translates to: RKGGLPRRYAVPDCNFAPIHGHG*PGVPSP
Trigger: TGGACTCGGCACTCCAGGCCAGCCGTGTCCATGTAT...AGGGGCGAAATTACAGTCTGGGACAGCATACCTCCTAGGTAAACCTCCTTTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550914.6
CDS-3UTR CCA 90 bp ACACGCACAGCCAAACAAGAGGACCGCACACAACGACACCTAGAGAAGCCACCATCATTAACTGGAACATaGTCTGCAGGGCATGGGCGC +
Preference number: 4 (lower is better)
Translates to: TRTAKQEDRTQRHLEKPPSLTGT*SAGHGR
Trigger: GCGCCCATGCCCTGCAGACCATGTTCCAGTTAATGA...TGGTGGCTTCTCTAGGTGTCGTTGTGTGCGGTCCTCTTGTTTGGCTGTGCGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp TCCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAGCCAGGCCTCCAGGATaGCTGCCGCTTTGTCCTCGT +
Preference number: 4 (lower is better)
Translates to: SSIHHNDPREGDYPPEAQARPPG*LPLCPR
Trigger: ACGAGGACAAAGCGGCAGCCATCCTGGAGGCCTGGC...TTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp TGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCGTAATCTGCGTTTCATaGGCAAAGCTGTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: WPSQGSALGMSPNSLTPTVICVS*AKLWLL
Trigger: CAGCAGCCACAGCTTTGCCCATGAAACGCAGATTAC...GGTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp ATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAGTCTAGCTTTTGGCCGGATGTTGGCCTaGGAGGCAGCATACGCGACG +
Preference number: 4 (lower is better)
Translates to: MAANDHKRCRRHEESLAFGRMLA*EAAYAT
Trigger: CGTCGCGTATGCTGCCTCCCAGGCCAACATCCGGCC...AAAAGCTAGACTCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp TCCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAGCACTCCCAGCAGAGTaGACACGGCGCCATCCAGGA +
Preference number: 4 (lower is better)
Translates to: SSIHHNDPREGDYPPEAQALPAE*TRRHPG
Trigger: TCCTGGATGGCGCCGTGTCCACTCTGCTGGGAGTGC...TTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp ATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATTGGGGTCCTGGATGGCAGGCGGTTCAAGCCGTTaGCTGGAGACACCTCAGGAT +
Preference number: 4 (lower is better)
Translates to: IREKEIIPLKHKLGSWMAGGSSR*LETPQD
Trigger: ATCCTGAGGTGTCTCCAGCCAACGGCTTGAACCGCC...TGCCATCCAGGACCCCAATTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp TGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCAGACGGGGTTTTCTGTaGCTTCCACGATCACTTGGT +
Preference number: 4 (lower is better)
Translates to: WPSQGSALGMSPNSLTPTRRGFL*LPRSLG
Trigger: ACCAAGTGATCGTGGAAGCCACAGAAAACCCCGTCT...GGTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp CCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAACGGGATGGACCACAGTaGAGTGGGCGAAGACGGGGT +
Preference number: 4 (lower is better)
Translates to: PASITMIREKEIIPLKHKRDGPQ*SGRRRG
Trigger: ACCCCGTCTTCGCCCACTCCACTGTGGTCCATCCCG...TTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp CAGAGTTCTATCCAAGAGCAGGTCCCTCACAAAGCCATGGAGGCTGCTCAAAGACATGGCAGTGGACGCTaGGTTCCGAGGGTTGTGAGA +
Preference number: 4 (lower is better)
Translates to: QSSIQEQVPHKAMEAAQRHGSGR*VPRVVR
Trigger: TCTCACAACCCTCGGAACCCAGCGTCCACTGCCATG...TCTTTGAGCAGCCTCCATGGCTTTGTGAGGGACCTGCTCTTGGATAGAACTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CCA 90 bp ATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAGTCTAGCTTTTAGTCTCAGGGTAGCCTaGGCAGAGTCCCCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: MAANDHKRCRRHEESLAFSLRVA*AESPSG
Trigger: CCCCGAGGGGGACTCTGCCCAGGCTACCCTGAGACT...AAAAGCTAGACTCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp GGCCGCAGCACCATGGCAGAGGAGGAGAGTGCAGAAGTAGTTCTGCTTTCCCACAAGACTAATGAAGCTTaGTTGTGGCACGGAGCCCAA +
Preference number: 4 (lower is better)
Translates to: GRSTMAEEESAEVVLLSHKTNEA*LWHGAQ
Trigger: TTGGGCTCCGTGCCACAACCAAGCTTCATTAGTCTT...GTGGGAAAGCAGAACTACTTCTGCACTCTCCTCCTCTGCCATGGTGCTGCGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CCA 90 bp ACACACGCACGCACGCACACACACACACACACACCCAGCAGCCACAAGCGGCTCTCAAAACATCATTTCTaGGAGACTGTGGGCCAAGAA +
Preference number: 4 (lower is better)
Translates to: THARTHTHTHTPSSHKRLSKHHF*ETVGQE
Trigger: TTCTTGGCCCACAGTCTCCCAGAAATGATGTTTTGA...GAGCCGCTTGTGGCTGCTGGGTGTGTGTGTGTGTGTGTGCGTGCGTGCGTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp ATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATTGGGGTCCTGGATGGCATGGTGTGGATTTGGATaGGGAGCCGACACTGGGTGC +
Preference number: 4 (lower is better)
Translates to: IREKEIIPLKHKLGSWMAWCGFG*GADTGC
Trigger: GCACCCAGTGTCGGCTCCCCATCCAAATCCACACCA...TGCCATCCAGGACCCCAATTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp CACATCGGTGTGAGAAGCGCTGGTCTACAGCGATTCCACTTCACCATTCACTCTGTGCTGGTGTGGATTTaGATGGGGAGCCGACACTGG +
Preference number: 4 (lower is better)
Translates to: HIGVRSAGLQRFHFTIHSVLVWI*MGSRHW
Trigger: CCAGTGTCGGCTCCCCATCCAAATCCACACCAGCAC...AGAGTGAATGGTGAAGTGGAATCGCTGTAGACCAGCGCTTCTCACACCGATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CCA 90 bp ATGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACGAGGTCACTATGCTGTaGGTATTTCTGGGGGCCCAT +
Preference number: 4 (lower is better)
Translates to: MAQPRLSTRHVTEFSNTHEVTML*VFLGAH
Trigger: ATGGGCCCCCAGAAATACCCACAGCATAGTGACCTC...GTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp AGCACAGCAAAGAAATACCTGGGAGATCAAGAGGAAACGGGAACACGCGCTGTGCGAAGGCCCCAAATATaGGGAGGCCCACAACCAAGA +
Preference number: 4 (lower is better)
Translates to: STAKKYLGDQEETGTRAVRRPQI*GGPQPR
Trigger: TCTTGGTTGTGGGCCTCCTCATATTTGGGGCCTTCG...CACAGCGCGTGTTCCCGTTTCCTCTTGATCTCCCAGGTATTTCTTTGCTGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR TCA 90 bp TACCTAGGAGGTATGCTGTCCCAGACTGTAATTTCGCCCCTTCCCAGAAGCAGTCGAAGGCCCCAAATATaGGGAGGCCCACAACCAAGA +
Preference number: 4 (lower is better)
Translates to: YLGGMLSQTVISPLPRSSRRPQI*GGPQPR
Trigger: TCTTGGTTGTGGGCCTCCTCATATTTGGGGCCTTCG...ACTGCTTCTGGGAAGGGGCGAAATTACAGTCTGGGACAGCATACCTCCTAGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550914.6
CDS-3UTR TCA 90 bp ATGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACTTCCAGTGCTGTTCTTaGCTGTGCCACCCACAATCA +
Preference number: 4 (lower is better)
Translates to: MAQPRLSTRHVTEFSNTHFQCCS*LCHPQS
Trigger: TGATTGTGGGTGGCACAGTCAAGAACAGCACTGGAA...GTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp TGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCAAGGAAAGCACCTTTTaGGTGGAGTTCTGTGCGACA +
Preference number: 4 (lower is better)
Translates to: WPSQGSALGMSPNSLTPTKESTF*VEFCAT
Trigger: TGTCGCACAGAACTCCACTCAAAAGGTGCTTTCCTT...GGTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp GGGGCTGCTTGTGACCTCTCCCTTCATCTGGGGGCTGGTTACACGGATGCGTTCAGAAATGGCAAAACCTaGGTTGTTGCAGCGTTAAAG +
Preference number: 4 (lower is better)
Translates to: GAACDLSLHLGAGYTDAFRNGKT*VVAALK
Trigger: CTTTAACGCTGCAACAACTCAGGTTTTGCCATTTCT...GAACGCATCCGTGTAACCAGCCCCCAGATGAAGGGAGAGGTCACAAGCAGCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000430669.6
CDS-3UTR TCA 90 bp ACACACGCACGCACGCACACACACACACACACACCCAGCAGCCACAAGCGGCTCGAATTGCAGGAAAAATaGGCAGAACCATGGCAAAAT +
Preference number: 4 (lower is better)
Translates to: THARTHTHTHTPSSHKRLELQEK*AEPWQN
Trigger: ATTTTGCCATGGTTCTGCTCATTTTTCCTGCAATTC...GAGCCGCTTGTGGCTGCTGGGTGTGTGTGTGTGTGTGTGCGTGCGTGCGTGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp ATGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCCTGAAGCCAGTCTCTaGAGTAGTGCAGCCACATTT +
Preference number: 4 (lower is better)
Translates to: MAQPRLSTRHVTEFSNTHPEASL*SSAATF
Trigger: AAATGTGGCTGCACTACTTCAGAGACTGGCTTCAGG...GTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp ATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAGTCTAGCTTTTCCAGGACCATCACAATaGTCCCGGCCGTCCAGGGGT +
Preference number: 4 (lower is better)
Translates to: MAANDHKRCRRHEESLAFPGPSQ*SRPSRG
Trigger: ACCCCTGGACGGCCGGGATCATTGTGATGGTCCTGG...AAAAGCTAGACTCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp ATGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACAAGCAACGTGAACGGTaGACTCCACTCCTATGCCAA +
Preference number: 4 (lower is better)
Translates to: MAQPRLSTRHVTEFSNTHKQRER*TPLLCQ
Trigger: TTGGCATAGGAGTGGAGTTCACCGTTCACGTTGCTT...GTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp CCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAACTCCTCGCTGAGGCCTaGCACTGTCGTCTGGGAACT +
Preference number: 4 (lower is better)
Translates to: PASITMIREKEIIPLKHKLLAEA*HCRLGT
Trigger: AGTTCCCAGACGACAGTGTCAGGCCTCAGCGAGGAG...TTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp ATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAGTCTAGCTTTTGCCGAAGCTCCTCGCTaGGGCCTGACACTGTCGTCT +
Preference number: 4 (lower is better)
Translates to: MAANDHKRCRRHEESLAFAEAPR*GLTLSS
Trigger: AGACGACAGTGTCAGGCCTCAGCGAGGAGCTTCGGC...AAAAGCTAGACTCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp ATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAGTCTAGCTTTTGGGTTCGAGGGTGGGTaGTGCCTGGATTCGGGATGG +
Preference number: 4 (lower is better)
Translates to: MAANDHKRCRRHEESLAFGFEGG*CLDSGW
Trigger: CCATCCCGAATCCAGGCATCACCCACCCTCGAACCC...AAAAGCTAGACTCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp ATGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACAGGAGATTATCCCCCTaGAGCACAAATTGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: MAQPRLSTRHVTEFSNTHRRLSP*STNWGP
Trigger: AGGACCCCAATTTGTGCTTCAGGGGGATAATCTCCT...GTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp TGCCTGGATTCGGGATGGACCACAGTGGAGTGGGCGAAGACGGGGTTTTCTGTGCAGCATCCATCACAATaGTCCGAGAGAAGGAGATTA +
Preference number: 4 (lower is better)
Translates to: CLDSGWTTVEWAKTGFSVQHPSQ*SERRRL
Trigger: TAATCTCCTTCTCTCGGATCATTGTGATGGATGCTG...CACAGAAAACCCCGTCTTCGCCCACTCCACTGTGGTCCATCCCGAATCCAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR TCA 90 bp ATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATTGGGGTCCTGGATGGCATCTCTGGTTACGAGATaGGGGAGCCCACACCTCAGA +
Preference number: 4 (lower is better)
Translates to: IREKEIIPLKHKLGSWMASLVTR*GSPHLR
Trigger: TCTGAGGTGTGGGCTCCCTCATCTCGTAACCAGAGA...TGCCATCCAGGACCCCAATTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp CCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAAGGCAGACCATGTGGGTaGCAGGCACCAAGACAGCAG +
Preference number: 4 (lower is better)
Translates to: PASITMIREKEIIPLKHKGRPCG*QAPRQQ
Trigger: CTGCTGTCTTGGTGCCTGTCACCCACATGGTCTGCC...TTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp TGCCTGGATTCGGGATGGACCACAGTGGAGTGGGCGAAGACGGGGTTTTCTGTGTCCCATCCATCTAGCTaGAGCATAAACAGGCCAATT +
Preference number: 4 (lower is better)
Translates to: CLDSGWTTVEWAKTGFSVSHPSS*SINRPI
Trigger: AATTGGCCTGTTTATGCTTCAGCTAGATGGATGGGA...CACAGAAAACCCCGTCTTCGCCCACTCCACTGTGGTCCATCCCGAATCCAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR TCA 90 bp ATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATTGGGGTCCTGGATGGCAGGATGCGTTCCCATGTaGCCAATTCGCTGTGGCATG +
Preference number: 4 (lower is better)
Translates to: IREKEIIPLKHKLGSWMAGCVPM*PIRCGM
Trigger: CATGCCACAGCGAATTGGTCACATGGGAACGCATCC...TGCCATCCAGGACCCCAATTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430669.6
CDS-3UTR GCA 90 bp ATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAGTCTAGCTTTTACCATTCTGTCCCCGTaGAGCGCGCCTCTCTCGCTC +
Preference number: 4 (lower is better)
Translates to: MAANDHKRCRRHEESLAFTILSP*SAPLSL
Trigger: GAGCGAGAGAGGCGCGCTGCACGGGGACAGAATGGT...AAAAGCTAGACTCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331920.11
CDS-3UTR GCA 90 bp CCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAACTCGGTCCCGGACTCTaGTTTCTTGTGCTCCTCGGC +
Preference number: 4 (lower is better)
Translates to: PASITMIREKEIIPLKHKLGPGL*FLVLLG
Trigger: GCCGAGGAGCACAAGAAAGCAGAGTCCGGGACCGAG...TTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331920.11
CDS-3UTR GCA 90 bp TCCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAACTTCCATTGCCACATTaGGCGGGGGTCCCGAGGTCT +
Preference number: 4 (lower is better)
Translates to: SSIHHNDPREGDYPPEAQLPLPH*AGVPRS
Trigger: AGACCTCGGGACCCCCGCGCAATGTGGCAATGGAAG...TTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000331920.11
CDS-3UTR GCA 90 bp CCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAAGGCCTCCAGGATGGCTaGCGCTTTGTCCTCGTTCCA +
Preference number: 4 (lower is better)
Translates to: PASITMIREKEIIPLKHKGLQDG*RFVLVP
Trigger: TGGAACGAGGACAAAGCGGCAGCCATCCTGGAGGCC...TTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp TGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCGACTGCATGGTAATCTaGGTTTCATGGGCAAAGCTG +
Preference number: 4 (lower is better)
Translates to: WPSQGSALGMSPNSLTPTDCMVI*VSWAKL
Trigger: CAGCTTTGCCCATGAAACGCAGATTACCATGCAGTC...GGTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp TGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCAGCTGGACAGTGGACTaGATGGTAATCTGCGTTTCA +
Preference number: 4 (lower is better)
Translates to: WPSQGSALGMSPNSLTPTSWTVD*MVICVS
Trigger: TGAAACGCAGATTACCATGCAGTCCACTGTCCAGCT...GGTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp ATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAGTCTAGCTTTTGTCACGGTGACGGGCTaGACAGAGATCTCGGAGCGC +
Preference number: 4 (lower is better)
Translates to: MAANDHKRCRRHEESLAFVTVTG*TEISER
Trigger: GCGCTCCGAGATCTCTGTGCAGCCCGTCACCGTGAC...AAAAGCTAGACTCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp AAGAGCACTAATGACGGGGAGGATGGAGACAATGTTTGGATTTACTTAGGAAGCGAATCAGACCCGCTGTaGGTGTGGCCGGGCGGCATG +
Preference number: 4 (lower is better)
Translates to: KSTNDGEDGDNVWIYLGSESDPL*VWPGGM
Trigger: CATGCCGCCCGGCCACACGCACAGCGGGTCTGATTC...GCTTCCTAAGTAAATCCAAACATTGTCTCCATCCTCCCCGTCATTAGTGCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp TGGGGTCCTGGATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAGGTCTGAGGTCACTATaGTGTGGGTATTTCTGGGGG +
Preference number: 4 (lower is better)
Translates to: WGPGWQPMIIRDAVDTRRGLRSL*CGYFWG
Trigger: CCCCCAGAAATACCCACAGCATAGTGACCTCAGACC...TCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCATCCAGGACCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp GGCCGCAGCACCATGGCAGAGGAGGAGAGTGCAGAAGTAGTTCTGCTTTCCCACTCTCACATCTGGTTCTaGCCTGTCATGGTTCTAATC +
Preference number: 4 (lower is better)
Translates to: GRSTMAEEESAEVVLLSHSHIWF*PVMVLI
Trigger: GATTAGAACCATGACAGGGCAGAACCAGATGTGAGA...GTGGGAAAGCAGAACTACTTCTGCACTCTCCTCCTCTGCCATGGTGCTGCGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR GCA 90 bp CGGGGTTTTCTGTGGCTTCCACGATCACTTGGTGGGCAGGGCCTCCCGCGCCCTTTAATCACAACTTTCTaGCTAGAATTCTGTGAGTTC +
Preference number: 4 (lower is better)
Translates to: RGFLWLPRSLGGQGLPRPLITTF*LEFCEF
Trigger: GAACTCACAGAATTCTAGGCAGAAAGTTGTGATTAA...AGGGCGCGGGAGGCCCTGCCCACCAAGTGATCGTGGAAGCCACAGAAAACCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CCA 90 bp AAGAGCACTAATGACGGGGAGGATGGAGACAATGTTTGGATTTACTTAGGAAGCCTCGCTCCCGGGACCTaGGGACTCCGCTCTGTGTGT +
Preference number: 4 (lower is better)
Translates to: KSTNDGEDGDNVWIYLGSLAPGT*GLRSVC
Trigger: ACACACAGAGCGGAGTCCCCAGGTCCCGGGAGCGAG...GCTTCCTAAGTAAATCCAAACATTGTCTCCATCCTCCCCGTCATTAGTGCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331920.11
CDS-3UTR CCA 90 bp TGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCTTGTACATGTATACATaGACACGGCTGGCCTGGAGT +
Preference number: 4 (lower is better)
Translates to: WPSQGSALGMSPNSLTPTLYMYT*TRLAWS
Trigger: ACTCCAGGCCAGCCGTGTCCATGTATACATGTACAA...GGTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp ATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAGTCTAGCTTTTTGTGGCGGGGCAGTCTaGATCGGCCGGATTGAGGCA +
Preference number: 4 (lower is better)
Translates to: MAANDHKRCRRHEESLAFCGGAV*IGRIEA
Trigger: TGCCTCAATCCGGCCGATCCAGACTGCCCCGCCACA...AAAAGCTAGACTCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp ACACACGCACGCACGCACACACACACACACACACCCAGCAGCCACAAGCGGCTCCCATATCAAGAGGTTTaGTTGAATTTTTGTTGGGGG +
Preference number: 4 (lower is better)
Translates to: THARTHTHTHTPSSHKRLPYQEV*LNFCWG
Trigger: CCCCCAACAAAAATTCAACCAAACCTCTTGATATGG...GAGCCGCTTGTGGCTGCTGGGTGTGTGTGTGTGTGTGTGCGTGCGTGCGTGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp AAGAGCACTAATGACGGGGAGGATGGAGACAATGTTTGGATTTACTTAGGAAGCAGCCCCACGGCACCCTaGGACTTGGAGCAGTCCCAG +
Preference number: 4 (lower is better)
Translates to: KSTNDGEDGDNVWIYLGSSPTAP*DLEQSQ
Trigger: CTGGGACTGCTCCAAGTCCCAGGGTGCCGTGGGGCT...GCTTCCTAAGTAAATCCAAACATTGTCTCCATCCTCCCCGTCATTAGTGCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp GGCCGCAGCACCATGGCAGAGGAGGAGAGTGCAGAAGTAGTTCTGCTTTCCCACACCAAGAGCGAGAAATaGCAAAACCTGAGTTGTTGC +
Preference number: 4 (lower is better)
Translates to: GRSTMAEEESAEVVLLSHTKSEK*QNLSCC
Trigger: GCAACAACTCAGGTTTTGCCATTTCTCGCTCTTGGT...GTGGGAAAGCAGAACTACTTCTGCACTCTCCTCCTCTGCCATGGTGCTGCGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CCA 90 bp ATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATTGGGGTCCTGGATGGCATACTCCGTGCGGAGCTaGACAGTGGACTGCATGGTA +
Preference number: 4 (lower is better)
Translates to: IREKEIIPLKHKLGSWMAYSVRS*TVDCMV
Trigger: TACCATGCAGTCCACTGTCCAGCTCCGCACGGAGTA...TGCCATCCAGGACCCCAATTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp AGGATGGTGAGGATCGCCAGCACAGCAAAGAAATACCTGGGAGATCAAGAGGAACTGGAGTCGGAGAACTaGGAGAGCAGGTCCCTTGTG +
Preference number: 4 (lower is better)
Translates to: RMVRIASTAKKYLGDQEELESEN*ESRSLV
Trigger: CACAAGGGACCTGCTCTCCCAGTTCTCCGACTCCAG...TTCCTCTTGATCTCCCAGGTATTTCTTTGCTGTGCTGGCGATCCTCACCATCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CCA 90 bp GACACTGTCGTCTGGGAACTATACTCCGAGTCGGAGGAATCAGACCCGCTGTGCCGCTGTTTAGTCAACTaGCTGATGTCGATGGGCTTA +
Preference number: 4 (lower is better)
Translates to: DTVVWELYSESEESDPLCRCLVN*LMSMGL
Trigger: TAAGCCCATCGACATCAGCCAGTTGACTAAACAGCG...GCACAGCGGGTCTGATTCCTCCGACTCGGAGTATAGTTCCCAGACGACAGTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CCA 90 bp CCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAAGGAAGGGGTAGCCGTTaGGGTAACTGGACAGCCCCA +
Preference number: 4 (lower is better)
Translates to: PASITMIREKEIIPLKHKGRGSR*GNWTAP
Trigger: TGGGGCTGTCCAGTTACCCCAACGGCTACCCCTTCC...TTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp TCCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAATGCCTGGATTCGGGATaGACCACAGTGGAGTGGGCG +
Preference number: 4 (lower is better)
Translates to: SSIHHNDPREGDYPPEAQCLDSG*TTVEWA
Trigger: CGCCCACTCCACTGTGGTCCATCCCGAATCCAGGCA...TTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp AAGAGCACTAATGACGGGGAGGATGGAGACAATGTTTGGATTTACTTAGGAAGCGCACGGAGCTGCCCATaGCAGTGGACGCTGGGTTCC +
Preference number: 4 (lower is better)
Translates to: KSTNDGEDGDNVWIYLGSARSCP*QWTLGS
Trigger: GGAACCCAGCGTCCACTGCCATGGGCAGCTCCGTGC...GCTTCCTAAGTAAATCCAAACATTGTCTCCATCCTCCCCGTCATTAGTGCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp TCCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAACGTGGAAAGGCACGTaGGGGTCCTCAAACAGGCCG +
Preference number: 4 (lower is better)
Translates to: SSIHHNDPREGDYPPEAQTWKGT*GSSNRP
Trigger: CGGCCTGTTTGAGGACCCCCACGTGCCTTTCCACGT...TTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp CGCCACCCTCCGTGTGCCCGACACAGCAGCATGGCAACGCCAGAAATGAACAAAAATTGGGGTCCTGGATaGCAGCCAATGATCATAAGA +
Preference number: 4 (lower is better)
Translates to: RHPPCARHSSMATPEMNKNWGPG*QPMIIR
Trigger: TCTTATGATCATTGGCTGCCATCCAGGACCCCAATT...TTTGTTCATTTCTGGCGTTGCCATGCTGCTGTGTCGGGCACACGGAGGGTGGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CCA 90 bp ATGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACTGCTGTGGGTATTTCTaGGGGCCCATTACCTTTCTG +
Preference number: 4 (lower is better)
Translates to: MAQPRLSTRHVTEFSNTHCCGYF*GPITFL
Trigger: CAGAAAGGTAATGGGCCCCCAGAAATACCCACAGCA...GTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp ATGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACTCCCTCACAAAGCCATaGAGGCTGCTCAAAGAAGCA +
Preference number: 4 (lower is better)
Translates to: MAQPRLSTRHVTEFSNTHSLTKP*RLLKEA
Trigger: TGCTTCTTTGAGCAGCCTCCATGGCTTTGTGAGGGA...GTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CCA 90 bp TGGGGTCCTGGATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGACGGTGTGAGAAGCGCTaGTCTACAGCGATTCCACTT +
Preference number: 4 (lower is better)
Translates to: WGPGWQPMIIRDAVDTRRRCEKR*STAIPL
Trigger: AAGTGGAATCGCTGTAGACCAGCGCTTCTCACACCG...TCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCATCCAGGACCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR CAA 72 bp CCCGAGACAATAATGGGCCACCTATTGGGTGATCCTTaGGCTTCAAGCTGCAGAGTTGTCTTTGCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: PETIMGHLLGDP*ASSCRVVFAAS
Trigger: GCTGGCAGCAAAGACAACTCTGCAGCTTGAAGCCAAAGGATCACCCAATAGGTGGCCCATTATTGTCTCGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR TCA 90 bp ACACACGCACGCACGCACACACACACACACACACCCAGCAGCCACAAGCGGCTCTGTGATAAGCTCTCCTaGTTTGTAACACAAATGTTC +
Preference number: 4 (lower is better)
Translates to: THARTHTHTHTPSSHKRLCDKLS*FVTQMF
Trigger: GAACATTTGTGTTACAAATCAGGAGAGCTTATCACA...GAGCCGCTTGTGGCTGCTGGGTGTGTGTGTGTGTGTGTGCGTGCGTGCGTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331920.11
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp ACACGCACAGCCAAACAAGAGGACCGCACACAACGACACCTAGAGAAGCCACCACATACTCGTACCCCTTaGAGTGCTCGTACATTTGCT +
Preference number: 4 (lower is better)
Translates to: TRTAKQEDRTQRHLEKPPHTRTP*SARTFA
Trigger: AGCAAATGTACGAGCACTTCAAGGGGTACGAGTATG...TGGTGGCTTCTCTAGGTGTCGTTGTGTGCGGTCCTCTTGTTTGGCTGTGCGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp ATGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACAAGGAAAGCACCTTTTaGGTGGAGTTCTGTGCGACA +
Preference number: 4 (lower is better)
Translates to: MAQPRLSTRHVTEFSNTHKESTF*VEFCAT
Trigger: TGTCGCACAGAACTCCACTCAAAAGGTGCTTTCCTT...GTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp ATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATTGGGGTCCTGGATGGCATCTGTCCTGTTTCACTaGAGGCGTGGGCCAGAAGAA +
Preference number: 4 (lower is better)
Translates to: IREKEIIPLKHKLGSWMASVLFH*RRGPEE
Trigger: TTCTTCTGGCCCACGCCTTCAGTGAAACAGGACAGA...TGCCATCCAGGACCCCAATTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp ACACGCACAGCCAAACAAGAGGACCGCACACAACGACACCTAGAGAAGCCACCAGAACCATGGCAAAATTaGACACCACTACTACCGCTG +
Preference number: 4 (lower is better)
Translates to: TRTAKQEDRTQRHLEKPPEPWQN*TPLLPL
Trigger: CAGCGGTAGTAGTGGTGTTCAATTTTGCCATGGTTC...TGGTGGCTTCTCTAGGTGTCGTTGTGTGCGGTCCTCTTGTTTGGCTGTGCGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp CCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATGGTGCCATAAAGGCTaGCCCCCAGCAAGCCCAGAA +
Preference number: 4 (lower is better)
Translates to: PASITMIREKEIIPLKHKWCHKG*PPASPE
Trigger: TTCTGGGCTTGCTGGGGGTCAGCCTTTATGGCACCA...TTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp GGGGCTGCTTGTGACCTCTCCCTTCATCTGGGGGCTGGTTACACGGATGCGTTCAAGGACTCCATCGTCTaGTCCATTCTTGTAATTGTT +
Preference number: 4 (lower is better)
Translates to: GAACDLSLHLGAGYTDAFKDSIV*SILVIV
Trigger: AACAATTACAAGAATGGATCAGACGATGGAGTCCTT...GAACGCATCCGTGTAACCAGCCCCCAGATGAAGGGAGAGGTCACAAGCAGCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430669.6
CDS-3UTR TCA 90 bp TGGGGTCCTGGATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAAAGCAACGTGAACGGTaGACTCCACTCCTATGCCAA +
Preference number: 4 (lower is better)
Translates to: WGPGWQPMIIRDAVDTRRKQRER*TPLLCQ
Trigger: TTGGCATAGGAGTGGAGTTCACCGTTCACGTTGCTT...TCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCATCCAGGACCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp ATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAGTCTAGCTTTTGAACGCCGAGGATGGTaGGGATCGCCAGCACAGCAA +
Preference number: 4 (lower is better)
Translates to: MAANDHKRCRRHEESLAFERRGW*GSPAQQ
Trigger: TTGCTGTGCTGGCGATCCTCACCATCCTCGGCGTTC...AAAAGCTAGACTCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp AAGAGCACTAATGACGGGGAGGATGGAGACAATGTTTGGATTTACTTAGGAAGCGGGTTCGAGGGTGGGTaGTGCCTGGATTCGGGATGG +
Preference number: 4 (lower is better)
Translates to: KSTNDGEDGDNVWIYLGSGFEGG*CLDSGW
Trigger: CCATCCCGAATCCAGGCATCACCCACCCTCGAACCC...GCTTCCTAAGTAAATCCAAACATTGTCTCCATCCTCCCCGTCATTAGTGCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp ACAGCGATTCCACTTCACCATTCACTCTATGCAAAAACTACAATAAGCAAGCTTGGGTTCCGAGGGTTGTaGGAACGGGCCCCGCGAGGG +
Preference number: 4 (lower is better)
Translates to: TAIPLHHSLYAKTTISKLGFRGL*ERAPRG
Trigger: CCCTCGCGGGGCCCGTTCTCACAACCCTCGGAACCC...AAGCTTGCTTATTGTAGTTTTTGCATAGAGTGAATGGTGAAGTGGAATCGCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR TCA 90 bp GAAGGCGGCCTCCATGATGCCAAATTGCCCAGTGGGCTATGCCACAGGCCAACCGCAGAAGCAAACAAATaGAGTGAAGGGTGTAGAATT +
Preference number: 4 (lower is better)
Translates to: EGGLHDAKLPSGLCHRPTAEANK*SEGCRI
Trigger: AATTCTACACCCTTCACTTCATTTGTTTGCTTCTGC...GGTTGGCCTGTGGCATAGCCCACTGGGCAATTTGGCATCATGGAGGCCGCCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR TCA 90 bp TGGGGTCCTGGATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGACTGGTTCCCCAAGGATaGCAAAGCTTGGACACATCA +
Preference number: 4 (lower is better)
Translates to: WGPGWQPMIIRDAVDTRRLVPQG*QSLDTS
Trigger: TGATGTGTCCAAGCTTTGTCATCCTTGGGGAACCAG...TCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCATCCAGGACCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430669.6
CDS-3UTR GCA 90 bp ACACGCACAGCCAAACAAGAGGACCGCACACAACGACACCTAGAGAAGCCACCATCGTACCCCTTGAAGTaGTCGTACATTTGCTTGGGA +
Preference number: 4 (lower is better)
Translates to: TRTAKQEDRTQRHLEKPPSYPLK*SYICLG
Trigger: TCCCAAGCAAATGTACGAGCACTTCAAGGGGTACGA...TGGTGGCTTCTCTAGGTGTCGTTGTGTGCGGTCCTCTTGTTTGGCTGTGCGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp ATGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACGACTGCATGGTAATCTaGGTTTCATGGGCAAAGCTG +
Preference number: 4 (lower is better)
Translates to: MAQPRLSTRHVTEFSNTHDCMVI*VSWAKL
Trigger: CAGCTTTGCCCATGAAACGCAGATTACCATGCAGTC...GTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp ATGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCCAGTCACTGTCAAATaGATCCTGAAGTCCCTGAAG +
Preference number: 4 (lower is better)
Translates to: MAQPRLSTRHVTEFSNTHPVTVK*ILKSLK
Trigger: CTTCAGGGACTTCAGGATGCATTTGACAGTGACTGG...GTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp TCCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAATGGGCTTATCGCGGCTaGCGGTTTGCACCAGGAGTT +
Preference number: 4 (lower is better)
Translates to: SSIHHNDPREGDYPPEAQWAYRG*RFAPGV
Trigger: AACTCCTGGTGCAAACCGGCAGCCGCGATAAGCCCA...TTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp ACACGCACAGCCAAACAAGAGGACCGCACACAACGACACCTAGAGAAGCCACCACCAGGCTCGTATAGTTaGTGCAGATGGTCCTTACTT +
Preference number: 4 (lower is better)
Translates to: TRTAKQEDRTQRHLEKPPPGSYS*CRWSLL
Trigger: AAGTAAGGACCATCTGCAGCAACTATACGAGCCTGG...TGGTGGCTTCTCTAGGTGTCGTTGTGTGCGGTCCTCTTGTTTGGCTGTGCGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp ATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAGTCTAGCTTTTGCCATCCAGGACGGGTaGAAACATGTGCTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: MAANDHKRCRRHEESLAFAIQDG*KHVLQG
Trigger: GCCCTGGAGCACATGTTTGCACCCGTCCTGGATGGC...AAAAGCTAGACTCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp ACACGCACAGCCAAACAAGAGGACCGCACACAACGACACCTAGAGAAGCCACCAGGAGAGTCTAGCTTTTaGCGGGCTGATTTGAAAGGA +
Preference number: 4 (lower is better)
Translates to: TRTAKQEDRTQRHLEKPPGESSF*RADLKG
Trigger: TCCTTTCAAATCAGCCCGGCAAAAGCTAGACTCTCC...TGGTGGCTTCTCTAGGTGTCGTTGTGTGCGGTCCTCTTGTTTGGCTGTGCGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp TGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCGGGCACCATGCTGCATaGTTTTTAGAGTATACAGAC +
Preference number: 4 (lower is better)
Translates to: WPSQGSALGMSPNSLTPTGHHAA*FLEYTD
Trigger: GTCTGTATACTCTAAAAAGCATGCAGCATGGTGCCC...GGTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp TGGGGTCCTGGATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGATCGACTTCAGAATTCTaGATCATCCCTCCTCCACGC +
Preference number: 4 (lower is better)
Translates to: WGPGWQPMIIRDAVDTRRSTSEF*IIPPPR
Trigger: GCGTGGAGGAGGGATGATGCAGAATTCTGAAGTCGA...TCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCATCCAGGACCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp ACACGCACAGCCAAACAAGAGGACCGCACACAACGACACCTAGAGAAGCCACCAGTCACGATGACGAGGTaGTGCAATCTACCAGATACA +
Preference number: 4 (lower is better)
Translates to: TRTAKQEDRTQRHLEKPPVTMTR*CNLPDT
Trigger: TGTATCTGGTAGATTGCAGCACCTCGTCATCGTGAC...TGGTGGCTTCTCTAGGTGTCGTTGTGTGCGGTCCTCTTGTTTGGCTGTGCGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR GCA 90 bp ATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAGTCTAGCTTTTCCCTTGCCTTGTCGCTaGGGGTCTCTTTGTCTCCCC +
Preference number: 4 (lower is better)
Translates to: MAANDHKRCRRHEESLAFPLPCR*GSLCLP
Trigger: GGGGAGACAAAGAGACCCGCAGCGACAAGGCAAGGG...AAAAGCTAGACTCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430669.6
CDS-3UTR CCA 90 bp TCCACCGCAAAGGAGGTTTACCTAGGAGGTATGCTGTCCCAGACTGTAATTTCGACAGCTCCTCCACGTTaGTCTCGAGGTTCGCTGCTT +
Preference number: 4 (lower is better)
Translates to: STAKEVYLGGMLSQTVISTAPPR*SRGSLL
Trigger: AAGCAGCGAACCTCGAGACCAACGTGGAGGAGCTGT...CGAAATTACAGTCTGGGACAGCATACCTCCTAGGTAAACCTCCTTTGCGGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550914.6
CDS-3UTR CCA 90 bp CCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAAATACATGGACACGGCTaGCCTGGAGTGCCGAGTCCA +
Preference number: 4 (lower is better)
Translates to: PASITMIREKEIIPLKHKIHGHG*PGVPSP
Trigger: TGGACTCGGCACTCCAGGCCAGCCGTGTCCATGTAT...TTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp ACACGCACAGCCAAACAAGAGGACCGCACACAACGACACCTAGAGAAGCCACCATTGGGAGTCATTAACTaGAACATGGTCTGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: TRTAKQEDRTQRHLEKPPLGVIN*NMVCRA
Trigger: TGCCCTGCAGACCATGTTCCAGTTAATGACTCCCAA...TGGTGGCTTCTCTAGGTGTCGTTGTGTGCGGTCCTCTTGTTTGGCTGTGCGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp TGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCAAAGCACCTTTTGAGTaGAGTTCTGTGCGACACTCT +
Preference number: 4 (lower is better)
Translates to: WPSQGSALGMSPNSLTPTKAPFE*SSVRHS
Trigger: AGAGTGTCGCACAGAACTCCACTCAAAAGGTGCTTT...GGTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp TGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCGTTTCACTGAAGGCGTaGGCCAGAAGAAAAACATCA +
Preference number: 4 (lower is better)
Translates to: WPSQGSALGMSPNSLTPTVSLKA*ARRKTS
Trigger: TGATGTTTTTCTTCTGGCCCACGCCTTCAGTGAAAC...GGTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp TGGGGTCCTGGATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAGTAATCTGCGTTTCATaGGCAAAGCTGTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: WGPGWQPMIIRDAVDTRRVICVS*AKLWLL
Trigger: CAGCAGCCACAGCTTTGCCCATGAAACGCAGATTAC...TCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCATCCAGGACCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp ATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAGTCTAGCTTTTGTGCTCTCTGGGCTCTaGCAGCTGAGGGTGTCCTGT +
Preference number: 4 (lower is better)
Translates to: MAANDHKRCRRHEESLAFVLSGL*QLRVSC
Trigger: ACAGGACACCCTCAGCTGCCAGAGCCCAGAGAGCAC...AAAAGCTAGACTCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp AAAGACTGGCAAATATTGGTAAAAGGTGGTGCTGTTTGTGTCCTTGTGGCGCTGGTGCTCTCTGGGCTCTaGCAGCTGAGGGTGTCCTGT +
Preference number: 4 (lower is better)
Translates to: KDWQILVKGGAVCVLVALVLSGL*QLRVSC
Trigger: ACAGGACACCCTCAGCTGCCAGAGCCCAGAGAGCAC...CAGCGCCACAAGGACACAAACAGCACCACCTTTTACCAATATTTGCCAGTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430669.6
CDS-3UTR CCA 90 bp TGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCCACTACCTTGGCTTTTaGTTTCAAGAGGAAAGGAGC +
Preference number: 4 (lower is better)
Translates to: WPSQGSALGMSPNSLTPTHYLGF*FQEERS
Trigger: GCTCCTTTCCTCTTGAAACCAAAAGCCAAGGTAGTG...GGTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp GGGGCTGCTTGTGACCTCTCCCTTCATCTGGGGGCTGGTTACACGGATGCGTTCAGTGCAGCCACATTTTaGGAAGCTGTTTGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: GAACDLSLHLGAGYTDAFSAATF*EAVCFL
Trigger: AAGAAAACAAACAGCTTCCCAAAATGTGGCTGCACT...GAACGCATCCGTGTAACCAGCCCCCAGATGAAGGGAGAGGTCACAAGCAGCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000430669.6
CDS-3UTR CCA 90 bp ATGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCGCTGTTTAGTCAACTaGCTGATGTCGATGGGCTTA +
Preference number: 4 (lower is better)
Translates to: MAQPRLSTRHVTEFSNTHRCLVN*LMSMGL
Trigger: TAAGCCCATCGACATCAGCCAGTTGACTAAACAGCG...GTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp TCCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAAGCCGTTGGGGTAACTaGACAGCCCCAGGCTCGTAT +
Preference number: 4 (lower is better)
Translates to: SSIHHNDPREGDYPPEAQSRWGN*TAPGSY
Trigger: ATACGAGCCTGGGGCTGTCCAGTTACCCCAACGGCT...TTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp CCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAAGGCGGTTCAAGCCGTTaGCTGGAGACACCTCAGGAT +
Preference number: 4 (lower is better)
Translates to: PASITMIREKEIIPLKHKGGSSR*LETPQD
Trigger: ATCCTGAGGTGTCTCCAGCCAACGGCTTGAACCGCC...TTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp AAGAGCACTAATGACGGGGAGGATGGAGACAATGTTTGGATTTACTTAGGAAGCCGGGATGGACCACAGTaGAGTGGGCGAAGACGGGGT +
Preference number: 4 (lower is better)
Translates to: KSTNDGEDGDNVWIYLGSRDGPQ*SGRRRG
Trigger: ACCCCGTCTTCGCCCACTCCACTGTGGTCCATCCCG...GCTTCCTAAGTAAATCCAAACATTGTCTCCATCCTCCCCGTCATTAGTGCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp ATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAGTCTAGCTTTTTGCCTGGATTCGGGATaGACCACAGTGGAGTGGGCG +
Preference number: 4 (lower is better)
Translates to: MAANDHKRCRRHEESLAFCLDSG*TTVEWA
Trigger: CGCCCACTCCACTGTGGTCCATCCCGAATCCAGGCA...AAAAGCTAGACTCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp CCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAAAGGGTGGGTGATGCCTaGATTCGGGATGGACCACAG +
Preference number: 4 (lower is better)
Translates to: PASITMIREKEIIPLKHKRVGDA*IRDGPQ
Trigger: CTGTGGTCCATCCCGAATCCAGGCATCACCCACCCT...TTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp TCCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAAGGGTGGGTGATGCCTaGATTCGGGATGGACCACAG +
Preference number: 4 (lower is better)
Translates to: SSIHHNDPREGDYPPEAQRVGDA*IRDGPQ
Trigger: CTGTGGTCCATCCCGAATCCAGGCATCACCCACCCT...TTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp ATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAGTCTAGCTTTTTCTCGGGTTCGAGGGTaGGTGATGCCTGGATTCGGG +
Preference number: 4 (lower is better)
Translates to: MAANDHKRCRRHEESLAFSRVRG*VMPGFG
Trigger: CCCGAATCCAGGCATCACCCACCCTCGAACCCGAGA...AAAAGCTAGACTCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp ATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAGTCTAGCTTTTACGTGGAAAGGCACGTaGGGGTCCTCAAACAGGCCG +
Preference number: 4 (lower is better)
Translates to: MAANDHKRCRRHEESLAFTWKGT*GSSNRP
Trigger: CGGCCTGTTTGAGGACCCCCACGTGCCTTTCCACGT...AAAAGCTAGACTCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp ATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATTGGGGTCCTGGATGGCAGCCTACATCTTTCAGTaGGGTGTGTCCATCCTCCTG +
Preference number: 4 (lower is better)
Translates to: IREKEIIPLKHKLGSWMAAYIFQ*GVSILL
Trigger: CAGGAGGATGGACACACCCCACTGAAAGATGTAGGC...TGCCATCCAGGACCCCAATTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp AGCACAGCAAAGAAATACCTGGGAGATCAAGAGGAAACGGGAACACGCGCTGTGGCCTACATCTTTCAGTaGGGTGTGTCCATCCTCCTG +
Preference number: 4 (lower is better)
Translates to: STAKKYLGDQEETGTRAVAYIFQ*GVSILL
Trigger: CAGGAGGATGGACACACCCCACTGAAAGATGTAGGC...CACAGCGCGTGTTCCCGTTTCCTCTTGATCTCCCAGGTATTTCTTTGCTGTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CCA 90 bp CCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAAGTGCTGGTGTGGATTTaGATGGGGAGCCGACACTGG +
Preference number: 4 (lower is better)
Translates to: PASITMIREKEIIPLKHKVLVWI*MGSRHW
Trigger: CCAGTGTCGGCTCCCCATCCAAATCCACACCAGCAC...TTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp AGCACAGCAAAGAAATACCTGGGAGATCAAGAGGAAACGGGAACACGCGCTGTGAACAAGGTGCTGGTGTaGATTTGGATGGGGAGCCGA +
Preference number: 4 (lower is better)
Translates to: STAKKYLGDQEETGTRAVNKVLV*IWMGSR
Trigger: TCGGCTCCCCATCCAAATCCACACCAGCACCTTGTT...CACAGCGCGTGTTCCCGTTTCCTCTTGATCTCCCAGGTATTTCTTTGCTGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CCA 90 bp AGGATGGTGAGGATCGCCAGCACAGCAAAGAAATACCTGGGAGATCAAGAGGAAGGATGGCAGACCATGTaGGTGACAGGCACCAAGACA +
Preference number: 4 (lower is better)
Translates to: RMVRIASTAKKYLGDQEEGWQTM*VTGTKT
Trigger: TGTCTTGGTGCCTGTCACCCACATGGTCTGCCATCC...TTCCTCTTGATCTCCCAGGTATTTCTTTGCTGTGCTGGCGATCCTCACCATCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CCA 90 bp AGCACAGCAAAGAAATACCTGGGAGATCAAGAGGAAACGGGAACACGCGCTGTGCTACTACCGCTGCCTTaGGAGAATTTAGCGCACTGG +
Preference number: 4 (lower is better)
Translates to: STAKKYLGDQEETGTRAVLLPLP*ENLAHW
Trigger: CCAGTGCGCTAAATTCTCCCAAGGCAGCGGTAGTAG...CACAGCGCGTGTTCCCGTTTCCTCTTGATCTCCCAGGTATTTCTTTGCTGTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CCA 90 bp CGCCACCCTCCGTGTGCCCGACACAGCAGCATGGCAACGCCAGAAATGAACAAAAGCGTAGGTCAAATGTaGCATTTCTTTCTGCAGTGT +
Preference number: 4 (lower is better)
Translates to: RHPPCARHSSMATPEMNKSVGQM*HFFLQC
Trigger: ACACTGCAGAAAGAAATGCCACATTTGACCTACGCT...TTTGTTCATTTCTGGCGTTGCCATGCTGCTGTGTCGGGCACACGGAGGGTGGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CCA 90 bp ATGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACGCTCAAAGAAGCAAGTaGTTTCCTCCTCTGCAGTTC +
Preference number: 4 (lower is better)
Translates to: MAQPRLSTRHVTEFSNTHAQRSK*FPPLQF
Trigger: GAACTGCAGAGGAGGAAACCACTTGCTTCTTTGAGC...GTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR TCA 90 bp GACACTGTCGTCTGGGAACTATACTCCGAGTCGGAGGAATCAGACCCGCTGTGCTTAAATAAGAGTCTCTaGAACTTCGCTCTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: DTVVWELYSESEESDPLCLNKSL*NFALSH
Trigger: GTGGCTGAGAGCGAAGTTTCAGAGACTCTTATTTAA...GCACAGCGGGTCTGATTCCTCCGACTCGGAGTATAGTTCCCAGACGACAGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR TCA 90 bp ATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATTGGGGTCCTGGATGGCATTCCAGTGCTGTTCTTaGCTGTGCCACCCACAATCA +
Preference number: 4 (lower is better)
Translates to: IREKEIIPLKHKLGSWMAFQCCS*LCHPQS
Trigger: TGATTGTGGGTGGCACAGTCAAGAACAGCACTGGAA...TGCCATCCAGGACCCCAATTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp AAGAGCACTAATGACGGGGAGGATGGAGACAATGTTTGGATTTACTTAGGAAGCCAGTCCTGCAGCCACTaGCAGTGCAACCAGCAGGAC +
Preference number: 4 (lower is better)
Translates to: KSTNDGEDGDNVWIYLGSQSCSH*QCNQQD
Trigger: GTCCTGCTGGTTGCACTGTCAGTGGCTGCAGGACTG...GCTTCCTAAGTAAATCCAAACATTGTCTCCATCCTCCCCGTCATTAGTGCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp TGGGGTCCTGGATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAGAACCATGGCAAAATTaGACACCACTACTACCGCTG +
Preference number: 4 (lower is better)
Translates to: WGPGWQPMIIRDAVDTRREPWQN*TPLLPL
Trigger: CAGCGGTAGTAGTGGTGTTCAATTTTGCCATGGTTC...TCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCATCCAGGACCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp TGGGGTCCTGGATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGACAGTACAGTACATGGTaGACTCACACACGTGTTCAC +
Preference number: 4 (lower is better)
Translates to: WGPGWQPMIIRDAVDTRRQYSTW*THTRVH
Trigger: GTGAACACGTGTGTGAGTTCACCATGTACTGTACTG...TCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCATCCAGGACCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp AGCACAGCAAAGAAATACCTGGGAGATCAAGAGGAAACGGGAACACGCGCTGTGAAAGCAGAGTCACGATaGCGAGGTGCTGCAATCTAC +
Preference number: 4 (lower is better)
Translates to: STAKKYLGDQEETGTRAVKAESR*RGAAIY
Trigger: GTAGATTGCAGCACCTCGTCATCGTGACTCTGCTTT...CACAGCGCGTGTTCCCGTTTCCTCTTGATCTCCCAGGTATTTCTTTGCTGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR GCA 90 bp TGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCACAATCAACTCCTCCTaGCAGTGCATATACTTTCTG +
Preference number: 4 (lower is better)
Translates to: WPSQGSALGMSPNSLTPTTINSS*QCIYFL
Trigger: CAGAAAGTATATGCACTGGCAGGAGGAGTTGATTGT...GGTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp TGGGGTCCTGGATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAAGCTGGACAGTGGACTaGATGGTAATCTGCGTTTCA +
Preference number: 4 (lower is better)
Translates to: WGPGWQPMIIRDAVDTRRSWTVD*MVICVS
Trigger: TGAAACGCAGATTACCATGCAGTCCACTGTCCAGCT...TCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCATCCAGGACCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp CCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAAATACTCGATGGGCTCTaGTGCCGGGATTCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: PASITMIREKEIIPLKHKILDGL*CRDSQP
Trigger: AGGCTGAGAATCCCGGCAGCAGAGCCCATCGAGTAT...TTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp CCAGGCTCGTATAGTTGCTGCAGATGGTCCTTACTTTTTCAATTGCCTCCACAATGGCACGGAGCCCAATaGACAAATACGGAGAGGCCC +
Preference number: 4 (lower is better)
Translates to: PGSYSCCRWSLLFQLPPQWHGAQ*TNTERP
Trigger: GGGCCTCTCCGTATTTGTGCATTGGGCTCCGTGCCA...TTGTGGAGGCAATTGAAAAAGTAAGGACCATCTGCAGCAACTATACGAGCCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR GCA 90 bp ATGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACGGGCACCATGCTGCATaGTTTTTAGAGTATACAGAC +
Preference number: 4 (lower is better)
Translates to: MAQPRLSTRHVTEFSNTHGHHAA*FLEYTD
Trigger: GTCTGTATACTCTAAAAAGCATGCAGCATGGTGCCC...GTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp ATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATTGGGGTCCTGGATGGCATCGACTTCAGAATTCTaGATCATCCCTCCTCCACGC +
Preference number: 4 (lower is better)
Translates to: IREKEIIPLKHKLGSWMASTSEF*IIPPPR
Trigger: GCGTGGAGGAGGGATGATGCAGAATTCTGAAGTCGA...TGCCATCCAGGACCCCAATTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp AGGATGGTGAGGATCGCCAGCACAGCAAAGAAATACCTGGGAGATCAAGAGGAAGAAAGTTCTACACCATaGAGAAATCAGGGGCCGCGC +
Preference number: 4 (lower is better)
Translates to: RMVRIASTAKKYLGDQEEESSTP*RNQGPR
Trigger: GCGCGGCCCCTGATTTCTGCATGGTGTAGAACTTTC...TTCCTCTTGATCTCCCAGGTATTTCTTTGCTGTGCTGGCGATCCTCACCATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR GCA 90 bp AGCACAGCAAAGAAATACCTGGGAGATCAAGAGGAAACGGGAACACGCGCTGTGCTGCAGAGTTGTCTTTaGTGCCAGCCCCAAATCCTT +
Preference number: 4 (lower is better)
Translates to: STAKKYLGDQEETGTRAVLQSCL*CQPQIL
Trigger: AAGGATTTGGGGCTGGCAGCAAAGACAACTCTGCAG...CACAGCGCGTGTTCCCGTTTCCTCTTGATCTCCCAGGTATTTCTTTGCTGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR GCA 90 bp TGGGGTCCTGGATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGACAAAGCCATGGAGGCTaGTCAAAGAAGCAAGTGGTT +
Preference number: 4 (lower is better)
Translates to: WGPGWQPMIIRDAVDTRRQSHGG*SKKQVV
Trigger: AACCACTTGCTTCTTTGAGCAGCCTCCATGGCTTTG...TCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCATCCAGGACCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR GCA 90 bp CGCCACCCTCCGTGTGCCCGACACAGCAGCATGGCAACGCCAGAAATGAACAAACTCAGTACTGAAGCGTaGCAAACAAACCAATCATTT +
Preference number: 4 (lower is better)
Translates to: RHPPCARHSSMATPEMNKLSTEA*QTNQSF
Trigger: AAATGATTGGTTTGTTTGGCACGCTTCAGTACTGAG...TTTGTTCATTTCTGGCGTTGCCATGCTGCTGTGTCGGGCACACGGAGGGTGGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR GCA 90 bp ATGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCACAAAAATATGGAATaGGACCTGAATGGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: MAQPRLSTRHVTEFSNTHHKNME*DLNGWA
Trigger: TGCCCAGCCATTCAGGTCGCATTCCATATTTTTGTG...GTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR GCA 90 bp TCCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAAGGCTTTCGGCGGAGTaGAGCGCGGACTCACAATTA +
Preference number: 4 (lower is better)
Translates to: SSIHHNDPREGDYPPEAQRLSAE*SADSQL
Trigger: TAATTGTGAGTCCGCGCTGCACTCCGCCGAAAGCCT...TTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430669.6
CDS-3UTR CCA 90 bp ATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAGTCTAGCTTTTATACATGGACACGGCTaGCCTGGAGTGCCGAGTCCA +
Preference number: 4 (lower is better)
Translates to: MAANDHKRCRRHEESLAFIHGHG*PGVPSP
Trigger: TGGACTCGGCACTCCAGGCCAGCCGTGTCCATGTAT...AAAAGCTAGACTCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp TGTGGTCAGGACATTAGCACCTTCTTCTTTAGGGGTCTGTATCATGAGTTGAGGATACATGGACACGGCTaGCCTGGAGTGCCGAGTCCA +
Preference number: 4 (lower is better)
Translates to: CGQDISTFFFRGLYHELRIHGHG*PGVPSP
Trigger: TGGACTCGGCACTCCAGGCCAGCCGTGTCCATGTAT...CCTCAACTCATGATACAGACCCCTAAAGAAGAAGGTGCTAATGTCCTGACCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551623.1
CDS-3UTR CCA 90 bp CCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAAATGGTCTGCAGGGCATaGGCGCTGACGAGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: PASITMIREKEIIPLKHKMVCRA*ALTSFP
Trigger: TGGAAAACTCGTCAGCGCCCATGCCCTGCAGACCAT...TTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp TGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCGCTCGTACATTTGCTTaGGAGTCATTAACTGGAACA +
Preference number: 4 (lower is better)
Translates to: WPSQGSALGMSPNSLTPTARTFA*ESLTGT
Trigger: TGTTCCAGTTAATGACTCCCAAGCAAATGTACGAGC...GGTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp ATGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACAAAGCACCTTTTGAGTaGAGTTCTGTGCGACACTCT +
Preference number: 4 (lower is better)
Translates to: MAQPRLSTRHVTEFSNTHKAPFE*SSVRHS
Trigger: AGAGTGTCGCACAGAACTCCACTCAAAAGGTGCTTT...GTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp CCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATACTCCGTGCGGAGCTaGACAGTGGACTGCATGGTA +
Preference number: 4 (lower is better)
Translates to: PASITMIREKEIIPLKHKYSVRS*TVDCMV
Trigger: TACCATGCAGTCCACTGTCCAGCTCCGCACGGAGTA...TTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp AAGAGCACTAATGACGGGGAGGATGGAGACAATGTTTGGATTTACTTAGGAAGCGTGCTCTCTGGGCTCTaGCAGCTGAGGGTGTCCTGT +
Preference number: 4 (lower is better)
Translates to: KSTNDGEDGDNVWIYLGSVLSGL*QLRVSC
Trigger: ACAGGACACCCTCAGCTGCCAGAGCCCAGAGAGCAC...GCTTCCTAAGTAAATCCAAACATTGTCTCCATCCTCCCCGTCATTAGTGCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp ATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAGTCTAGCTTTTCTGGAGTCGGAGAACTaGGAGAGCAGGTCCCTTGTG +
Preference number: 4 (lower is better)
Translates to: MAANDHKRCRRHEESLAFLESEN*ESRSLV
Trigger: CACAAGGGACCTGCTCTCCCAGTTCTCCGACTCCAG...AAAAGCTAGACTCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp ATGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCACTACCTTGGCTTTTaGTTTCAAGAGGAAAGGAGC +
Preference number: 4 (lower is better)
Translates to: MAQPRLSTRHVTEFSNTHHYLGF*FQEERS
Trigger: GCTCCTTTCCTCTTGAAACCAAAAGCCAAGGTAGTG...GTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp ACACACGCACGCACGCACACACACACACACACACCCAGCAGCCACAAGCGGCTCATTCTTGTAATTGTTTaGCATGATTTTCCCGGTTTC +
Preference number: 4 (lower is better)
Translates to: THARTHTHTHTPSSHKRLILVIV*HDFPGF
Trigger: GAAACCGGGAAAATCATGCCAAACAATTACAAGAAT...GAGCCGCTTGTGGCTGCTGGGTGTGTGTGTGTGTGTGTGCGTGCGTGCGTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp TGGGGTCCTGGATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGACGCTGTTTAGTCAACTaGCTGATGTCGATGGGCTTA +
Preference number: 4 (lower is better)
Translates to: WGPGWQPMIIRDAVDTRRRCLVN*LMSMGL
Trigger: TAAGCCCATCGACATCAGCCAGTTGACTAAACAGCG...TCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCATCCAGGACCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp ATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAGTCTAGCTTTTACTGGGCATACTCGATaGGCTCTGCTGCCGGGATTC +
Preference number: 4 (lower is better)
Translates to: MAANDHKRCRRHEESLAFTGHTR*ALLPGF
Trigger: GAATCCCGGCAGCAGAGCCCATCGAGTATGCCCAGT...AAAAGCTAGACTCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp ACACACGCACGCACGCACACACACACACACACACCCAGCAGCCACAAGCGGCTCTATAGTTGCTGCAGATaGTCCTTACTTTTTCAATTG +
Preference number: 4 (lower is better)
Translates to: THARTHTHTHTPSSHKRLYSCCR*SLLFQL
Trigger: CAATTGAAAAAGTAAGGACCATCTGCAGCAACTATA...GAGCCGCTTGTGGCTGCTGGGTGTGTGTGTGTGTGTGTGCGTGCGTGCGTGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp CCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAAGGTTCTTGTCGCCGATaGCCGTCAGAAAGGCCAAAG +
Preference number: 4 (lower is better)
Translates to: PASITMIREKEIIPLKHKGSCRR*PSERPK
Trigger: CTTTGGCCTTTCTGACGGCCATCGGCGACAAGAACC...TTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp CCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATGGACCACAGTGGAGTaGGCGAAGACGGGGTTTTCT +
Preference number: 4 (lower is better)
Translates to: PASITMIREKEIIPLKHKWTTVE*AKTGFS
Trigger: AGAAAACCCCGTCTTCGCCCACTCCACTGTGGTCCA...TTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp ATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAGTCTAGCTTTTCATGGCAGTGGACGCTaGGTTCCGAGGGTTGTGAGA +
Preference number: 4 (lower is better)
Translates to: MAANDHKRCRRHEESLAFHGSGR*VPRVVR
Trigger: TCTCACAACCCTCGGAACCCAGCGTCCACTGCCATG...AAAAGCTAGACTCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp TCCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAGGAAAGAGGTGGGGGTaGGGGGTTTCCAATCTTTGG +
Preference number: 4 (lower is better)
Translates to: SSIHHNDPREGDYPPEAQGKRWG*GVSNLW
Trigger: CCAAAGATTGGAAACCCCCCACCCCCACCTCTTTCC...TTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp TGGGGTCCTGGATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAAAGACTAATGAAGCTTaGTTGTGGCACGGAGCCCAA +
Preference number: 4 (lower is better)
Translates to: WGPGWQPMIIRDAVDTRRKTNEA*LWHGAQ
Trigger: TTGGGCTCCGTGCCACAACCAAGCTTCATTAGTCTT...TCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCATCCAGGACCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp CCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAAGGGTCGTGTGTGTGTTaGTCAGAAGAGGGGCACCAT +
Preference number: 4 (lower is better)
Translates to: PASITMIREKEIIPLKHKGSCVC*SEEGHH
Trigger: ATGGTGCCCCTCTTCTGACCAACACACACACGACCC...TTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp CACATCGGTGTGAGAAGCGCTGGTCTACAGCGATTCCACTTCACCATTCACTCTAGAAGTCTAGCTCCATaGACATTGCAGGGAGGTAGC +
Preference number: 4 (lower is better)
Translates to: HIGVRSAGLQRFHFTIHSRSLAP*TLQGGS
Trigger: GCTACCTCCCTGCAATGTCCATGGAGCTAGACTTCT...AGAGTGAATGGTGAAGTGGAATCGCTGTAGACCAGCGCTTCTCACACCGATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CCA 90 bp ATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATTGGGGTCCTGGATGGCACGCGGACGCTGGGCTTaGATTTCACATCAATTCCTT +
Preference number: 4 (lower is better)
Translates to: IREKEIIPLKHKLGSWMARGRWA*ISHQFL
Trigger: AAGGAATTGATGTGAAATCCAAGCCCAGCGTCCGCG...TGCCATCCAGGACCCCAATTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430669.6
CDS-3UTR CCA 90 bp TCCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAACGATGGCGCGGACGCTaGGCTTGGATTTCACATCAA +
Preference number: 4 (lower is better)
Translates to: SSIHHNDPREGDYPPEAQRWRGR*AWISHQ
Trigger: TTGATGTGAAATCCAAGCCCAGCGTCCGCGCCATCG...TTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430669.6
CDS-3UTR CCA 90 bp GGGGCTGCTTGTGACCTCTCCCTTCATCTGGGGGCTGGTTACACGGATGCGTTCCACCTCCATAAAGACTaGCAAATATTGGTAAAAGGT +
Preference number: 4 (lower is better)
Translates to: GAACDLSLHLGAGYTDAFHLHKD*QILVKG
Trigger: ACCTTTTACCAATATTTGCCAGTCTTTATGGAGGTG...GAACGCATCCGTGTAACCAGCCCCCAGATGAAGGGAGAGGTCACAAGCAGCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000430669.6
CDS-3UTR TCA 90 bp TGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCGTCTGTATCATGAGTTaGGGATTAAACATAGCCTCT +
Preference number: 4 (lower is better)
Translates to: WPSQGSALGMSPNSLTPTVCIMS*GLNIAS
Trigger: AGAGGCTATGTTTAATCCTCAACTCATGATACAGAC...GGTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp ATGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACATCAAGAGGTTTGGTTaGATTTTTGTTGGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: MAQPRLSTRHVTEFSNTHIKRFG*IFVGGC
Trigger: ACAGCCCCCAACAAAAATTCAACCAAACCTCTTGAT...GTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp ATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATTGGGGTCCTGGATGGCAGAACCATGGCAAAATTaGACACCACTACTACCGCTG +
Preference number: 4 (lower is better)
Translates to: IREKEIIPLKHKLGSWMAEPWQN*TPLLPL
Trigger: CAGCGGTAGTAGTGGTGTTCAATTTTGCCATGGTTC...TGCCATCCAGGACCCCAATTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp AAGAGCACTAATGACGGGGAGGATGGAGACAATGTTTGGATTTACTTAGGAAGCTGTCCTGTGTCACGGTaGCGGGCTGCACAGAGATCT +
Preference number: 4 (lower is better)
Translates to: KSTNDGEDGDNVWIYLGSCPVSR*RAAQRS
Trigger: AGATCTCTGTGCAGCCCGTCACCGTGACACAGGACA...GCTTCCTAAGTAAATCCAAACATTGTCTCCATCCTCCCCGTCATTAGTGCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp TGGGGTCCTGGATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGACATACTTCACGTTACTaGAACTCCTGTGTAGGTCGT +
Preference number: 4 (lower is better)
Translates to: WGPGWQPMIIRDAVDTRRHTSRY*NSCVGR
Trigger: ACGACCTACACAGGAGTTTCAGTAACGTGAAGTATG...TCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCATCCAGGACCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp ATGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACTGTAATTGTTTGGCATaGTTTTCCCGGTTTCCCAGT +
Preference number: 4 (lower is better)
Translates to: MAQPRLSTRHVTEFSNTHCNCLA*FSRFPS
Trigger: ACTGGGAAACCGGGAAAATCATGCCAAACAATTACA...GTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp TGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCAAGGACTCCATCGTCTaGTCCATTCTTGTAATTGTT +
Preference number: 4 (lower is better)
Translates to: WPSQGSALGMSPNSLTPTKDSIV*SILVIV
Trigger: AACAATTACAAGAATGGATCAGACGATGGAGTCCTT...GGTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp AAGAGCACTAATGACGGGGAGGATGGAGACAATGTTTGGATTTACTTAGGAAGCTGCCTCCACAAAGTCTaGGGTGTCCCGCAAGCCGTT +
Preference number: 4 (lower is better)
Translates to: KSTNDGEDGDNVWIYLGSCLHKV*GVPQAV
Trigger: AACGGCTTGCGGGACACCTCAGACTTTGTGGAGGCA...GCTTCCTAAGTAAATCCAAACATTGTCTCCATCCTCCCCGTCATTAGTGCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp ATGATGCCATCTGCATCCACCAGACGCTGTTTAGTCAACTGGCTGATGTCGATGAAGCAACGTGAACGGTaGACTCCACTCCTATGCCAA +
Preference number: 4 (lower is better)
Translates to: MMPSASTRRCLVNWLMSMKQRER*TPLLCQ
Trigger: TTGGCATAGGAGTGGAGTTCACCGTTCACGTTGCTT...CATCGACATCAGCCAGTTGACTAAACAGCGTCTGGTGGATGCAGATGGCATCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR TCA 90 bp ATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATTGGGGTCCTGGATGGCACAGTACAGTACATGGTaGACTCACACACGTGTTCAC +
Preference number: 4 (lower is better)
Translates to: IREKEIIPLKHKLGSWMAQYSTW*THTRVH
Trigger: GTGAACACGTGTGTGAGTTCACCATGTACTGTACTG...TGCCATCCAGGACCCCAATTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp ATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATTGGGGTCCTGGATGGCACATGATGAACTGATGTaGGCTCCATACCCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: IREKEIIPLKHKLGSWMAHDELM*APYPEV
Trigger: AACCTCAGGGTATGGAGCTCACATCAGTTCATCATG...TGCCATCCAGGACCCCAATTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp ATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAGTCTAGCTTTTGGGCCACCTATTGGGTaGTCCTTTGGCTTCAAGCTG +
Preference number: 4 (lower is better)
Translates to: MAANDHKRCRRHEESLAFGPPIG*SFGFKL
Trigger: CAGCTTGAAGCCAAAGGATCACCCAATAGGTGGCCC...AAAAGCTAGACTCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR GCA 90 bp TCGGGGATGCCGAGAACCCCAGGAGAACCTTGTCCTCCTCTTTGCCTGGCTCTATGTTCCAATTTCCACTaGCTGTTGTACATGTATACA +
Preference number: 4 (lower is better)
Translates to: SGMPRTPGEPCPPLCLALCSNFH*LLYMYT
Trigger: TGTATACATGTACAACAGGCAGTGGAAATTGGAACA...TAGAGCCAGGCAAAGAGGAGGACAAGGTTCTCCTGGGGTTCTCGGCATCCCCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430669.6
CDS-3UTR GCA 90 bp AAGAGCACTAATGACGGGGAGGATGGAGACAATGTTTGGATTTACTTAGGAAGCAACTGGAACATGGTCTaGAGGGCATGGGCGCTGACG +
Preference number: 4 (lower is better)
Translates to: KSTNDGEDGDNVWIYLGSNWNMV*RAWALT
Trigger: CGTCAGCGCCCATGCCCTGCAGACCATGTTCCAGTT...GCTTCCTAAGTAAATCCAAACATTGTCTCCATCCTCCCCGTCATTAGTGCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp ATGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACAAGTGCTCGTACATTTaGTTGGGAGTCATTAACTGG +
Preference number: 4 (lower is better)
Translates to: MAQPRLSTRHVTEFSNTHKCSYI*LGVINW
Trigger: CCAGTTAATGACTCCCAAGCAAATGTACGAGCACTT...GTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp CCAGGCTCGTATAGTTGCTGCAGATGGTCCTTACTTTTTCAATTGCCTCCACAAATACTCGATGGGCTCTaGTGCCGGGATTCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: PGSYSCCRWSLLFQLPPQILDGL*CRDSQP
Trigger: AGGCTGAGAATCCCGGCAGCAGAGCCCATCGAGTAT...TTGTGGAGGCAATTGAAAAAGTAAGGACCATCTGCAGCAACTATACGAGCCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR GCA 90 bp ATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATTGGGGTCCTGGATGGCACCAGGCTCGTATAGTTaGTGCAGATGGTCCTTACTT +
Preference number: 4 (lower is better)
Translates to: IREKEIIPLKHKLGSWMAPGSYS*CRWSLL
Trigger: AAGTAAGGACCATCTGCAGCAACTATACGAGCCTGG...TGCCATCCAGGACCCCAATTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp ATGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACTTGCTAGGGCCAGAATaGCCTTCAGTAGAAATTTCA +
Preference number: 4 (lower is better)
Translates to: MAQPRLSTRHVTEFSNTHLLGPE*PSVEIS
Trigger: TGAAATTTCTACTGAAGGGCATTCTGGCCCTAGCAA...GTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp TCCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAATCGCATTCCACGTCCTaGAGCTCAATGACTTCCACC +
Preference number: 4 (lower is better)
Translates to: SSIHHNDPREGDYPPEAQSHSTS*SSMTST
Trigger: GGTGGAAGTCATTGAGCTGCAGGACGTGGAATGCGA...TTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp CACATCGGTGTGAGAAGCGCTGGTCTACAGCGATTCCACTTCACCATTCACTCTGGAGAGTCTAGCTTTTaGCGGGCTGATTTGAAAGGA +
Preference number: 4 (lower is better)
Translates to: HIGVRSAGLQRFHFTIHSGESSF*RADLKG
Trigger: TCCTTTCAAATCAGCCCGGCAAAAGCTAGACTCTCC...AGAGTGAATGGTGAAGTGGAATCGCTGTAGACCAGCGCTTCTCACACCGATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR GCA 90 bp TCCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAGGTCTGAGGTCACTATaGTGTGGGTATTTCTGGGGG +
Preference number: 4 (lower is better)
Translates to: SSIHHNDPREGDYPPEAQGLRSL*CGYFWG
Trigger: CCCCCAGAAATACCCACAGCATAGTGACCTCAGACC...TTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp CCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAAGAAAGTTCTACACCATaGAGAAATCAGGGGCCGCGC +
Preference number: 4 (lower is better)
Translates to: PASITMIREKEIIPLKHKESSTP*RNQGPR
Trigger: GCGCGGCCCCTGATTTCTGCATGGTGTAGAACTTTC...TTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp ATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATTGGGGTCCTGGATGGCACAGAGTTGTCTTTGCTaGCAGCCCCAAATCCTTTAC +
Preference number: 4 (lower is better)
Translates to: IREKEIIPLKHKLGSWMAQSCLC*QPQILY
Trigger: GTAAAGGATTTGGGGCTGGCAGCAAAGACAACTCTG...TGCCATCCAGGACCCCAATTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR GCA 90 bp ACTCTGCATGGCTGGAGGGCACAGACTCCACGCAGGGATGCGTTTCTGGAACTACATTATTTGCTGTTGTaGAAATGGCACTTATGGGGT +
Preference number: 4 (lower is better)
Translates to: TLHGWRAQTPRRDAFLELHYLLL*KWHLWG
Trigger: ACCCCATAAGTGCCATTTGCACAACAGCAAATAATG...TAGTTCCAGAAACGCATCCCTGCGTGGAGTCTGTGCCCTCCAGCCATGCAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR GCA 90 bp AGCACAGCAAAGAAATACCTGGGAGATCAAGAGGAAACGGGAACACGCGCTGTGGGGGTCCCCATTATTTaGTGTTGTGCAAATGGCACT +
Preference number: 4 (lower is better)
Translates to: STAKKYLGDQEETGTRAVGVPII*CCANGT
Trigger: AGTGCCATTTGCACAACAGCAAATAATGGGGACCCC...CACAGCGCGTGTTCCCGTTTCCTCTTGATCTCCCAGGTATTTCTTTGCTGTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CCA 90 bp ATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAGTCTAGCTTTTACAGCTCCTCCACGTTaGTCTCGAGGTTCGCTGCTT +
Preference number: 4 (lower is better)
Translates to: MAANDHKRCRRHEESLAFTAPPR*SRGSLL
Trigger: AAGCAGCGAACCTCGAGACCAACGTGGAGGAGCTGT...AAAAGCTAGACTCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp ATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATTGGGGTCCTGGATGGCATTGTACATGTATACATaGACACGGCTGGCCTGGAGT +
Preference number: 4 (lower is better)
Translates to: IREKEIIPLKHKLGSWMALYMYT*TRLAWS
Trigger: ACTCCAGGCCAGCCGTGTCCATGTATACATGTACAA...TGCCATCCAGGACCCCAATTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp AAGGGTCGAAGTTTGTCCACCGCAAAGGAGGTTTACCTAGGAGGTATGCTGTCCTTGTACATGTATACATaGACACGGCTGGCCTGGAGT +
Preference number: 4 (lower is better)
Translates to: KGRSLSTAKEVYLGGMLSLYMYT*TRLAWS
Trigger: ACTCCAGGCCAGCCGTGTCCATGTATACATGTACAA...GGACAGCATACCTCCTAGGTAAACCTCCTTTGCGGTGGACAAACTTCGACCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550914.6
CDS-3UTR CCA 90 bp TGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCCCATATCAAGAGGTTTaGTTGAATTTTTGTTGGGGG +
Preference number: 4 (lower is better)
Translates to: WPSQGSALGMSPNSLTPTPYQEV*LNFCWG
Trigger: CCCCCAACAAAAATTCAACCAAACCTCTTGATATGG...GGTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp TGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCAGTGCATATACTTTCTaGATAAGCCATGACATCCAC +
Preference number: 4 (lower is better)
Translates to: WPSQGSALGMSPNSLTPTSAYTF*ISHDIH
Trigger: GTGGATGTCATGGCTTATCCAGAAAGTATATGCACT...GGTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp ATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAGTCTAGCTTTTATGGTCTGCAGGGCATaGGCGCTGACGAGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: MAANDHKRCRRHEESLAFMVCRA*ALTSFP
Trigger: TGGAAAACTCGTCAGCGCCCATGCCCTGCAGACCAT...AAAAGCTAGACTCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp TCCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAATCATTAACTGGAACATaGTCTGCAGGGCATGGGCGC +
Preference number: 4 (lower is better)
Translates to: SSIHHNDPREGDYPPEAQSLTGT*SAGHGR
Trigger: GCGCCCATGCCCTGCAGACCATGTTCCAGTTAATGA...TTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp CCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATCATTAACTGGAACATaGTCTGCAGGGCATGGGCGC +
Preference number: 4 (lower is better)
Translates to: PASITMIREKEIIPLKHKSLTGT*SAGHGR
Trigger: GCGCCCATGCCCTGCAGACCATGTTCCAGTTAATGA...TTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp GGGGCTGCTTGTGACCTCTCCCTTCATCTGGGGGCTGGTTACACGGATGCGTTCATTCTTGTAATTGTTTaGCATGATTTTCCCGGTTTC +
Preference number: 4 (lower is better)
Translates to: GAACDLSLHLGAGYTDAFILVIV*HDFPGF
Trigger: GAAACCGGGAAAATCATGCCAAACAATTACAAGAAT...GAACGCATCCGTGTAACCAGCCCCCAGATGAAGGGAGAGGTCACAAGCAGCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000430669.6
CDS-3UTR CCA 90 bp GGGGCTGCTTGTGACCTCTCCCTTCATCTGGGGGCTGGTTACACGGATGCGTTCTATAGTTGCTGCAGATaGTCCTTACTTTTTCAATTG +
Preference number: 4 (lower is better)
Translates to: GAACDLSLHLGAGYTDAFYSCCR*SLLFQL
Trigger: CAATTGAAAAAGTAAGGACCATCTGCAGCAACTATA...GAACGCATCCGTGTAACCAGCCCCCAGATGAAGGGAGAGGTCACAAGCAGCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000430669.6
CDS-3UTR CCA 90 bp ATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAGTCTAGCTTTTGGTTCTTGTCGCCGATaGCCGTCAGAAAGGCCAAAG +
Preference number: 4 (lower is better)
Translates to: MAANDHKRCRRHEESLAFGSCRR*PSERPK
Trigger: CTTTGGCCTTTCTGACGGCCATCGGCGACAAGAACC...AAAAGCTAGACTCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp CCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAAGTTCAAGCCGTTGGCTaGAGACACCTCAGGATATGG +
Preference number: 4 (lower is better)
Translates to: PASITMIREKEIIPLKHKVQAVG*RHLRIW
Trigger: CCATATCCTGAGGTGTCTCCAGCCAACGGCTTGAAC...TTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp AAGAGCACTAATGACGGGGAGGATGGAGACAATGTTTGGATTTACTTAGGAAGCAGGGTGGGTGATGCCTaGATTCGGGATGGACCACAG +
Preference number: 4 (lower is better)
Translates to: KSTNDGEDGDNVWIYLGSRVGDA*IRDGPQ
Trigger: CTGTGGTCCATCCCGAATCCAGGCATCACCCACCCT...GCTTCCTAAGTAAATCCAAACATTGTCTCCATCCTCCCCGTCATTAGTGCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp ATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATTGGGGTCCTGGATGGCAAATGAACTGCTGTCCTaGCACAGGGCATCTTTTCCA +
Preference number: 4 (lower is better)
Translates to: IREKEIIPLKHKLGSWMANELLS*HRASFP
Trigger: TGGAAAAGATGCCCTGTGCCAGGACAGCAGTTCATT...TGCCATCCAGGACCCCAATTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp ATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATTGGGGTCCTGGATGGCAAAGACTAATGAAGCTTaGTTGTGGCACGGAGCCCAA +
Preference number: 4 (lower is better)
Translates to: IREKEIIPLKHKLGSWMAKTNEA*LWHGAQ
Trigger: TTGGGCTCCGTGCCACAACCAAGCTTCATTAGTCTT...TGCCATCCAGGACCCCAATTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp TGGGGTCCTGGATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAAATTGGGGTCCTGGATaGCAGCCAATGATCATAAGA +
Preference number: 4 (lower is better)
Translates to: WGPGWQPMIIRDAVDTRRNWGPG*QPMIIR
Trigger: TCTTATGATCATTGGCTGCCATCCAGGACCCCAATT...TCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCATCCAGGACCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp ATGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACTCAAAACATCATTTCTaGGAGACTGTGGGCCAAGAA +
Preference number: 4 (lower is better)
Translates to: MAQPRLSTRHVTEFSNTHSKHHF*ETVGQE
Trigger: TTCTTGGCCCACAGTCTCCCAGAAATGATGTTTTGA...GTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp TCCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAGCCTACATCTTTCAGTaGGGTGTGTCCATCCTCCTG +
Preference number: 4 (lower is better)
Translates to: SSIHHNDPREGDYPPEAQAYIFQ*GVSILL
Trigger: CAGGAGGATGGACACACCCCACTGAAAGATGTAGGC...TTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp CCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAAGCCTACATCTTTCAGTaGGGTGTGTCCATCCTCCTG +
Preference number: 4 (lower is better)
Translates to: PASITMIREKEIIPLKHKAYIFQ*GVSILL
Trigger: CAGGAGGATGGACACACCCCACTGAAAGATGTAGGC...TTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp ATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAGTCTAGCTTTTGGATGGCAGACCATGTaGGTGACAGGCACCAAGACA +
Preference number: 4 (lower is better)
Translates to: MAANDHKRCRRHEESLAFGWQTM*VTGTKT
Trigger: TGTCTTGGTGCCTGTCACCCACATGGTCTGCCATCC...AAAAGCTAGACTCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp TCCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAAGCTGGGTGTTAGGATaGCAGACCATGTGGGTGACA +
Preference number: 4 (lower is better)
Translates to: SSIHHNDPREGDYPPEAQSWVLG*QTMWVT
Trigger: TGTCACCCACATGGTCTGCCATCCTAACACCCAGCT...TTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp ACACGCACAGCCAAACAAGAGGACCGCACACAACGACACCTAGAGAAGCCACCAAAGCAGCCAATGTCTTaGTCTAATGTAAACTGCTGG +
Preference number: 4 (lower is better)
Translates to: TRTAKQEDRTQRHLEKPPKQPMS*SNVNCW
Trigger: CCAGCAGTTTACATTAGACCAAGACATTGGCTGCTT...TGGTGGCTTCTCTAGGTGTCGTTGTGTGCGGTCCTCTTGTTTGGCTGTGCGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CCA 90 bp TCCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAGGAATGCGACCTGAATaGCTGGGCAGACTGAAAGCA +
Preference number: 4 (lower is better)
Translates to: SSIHHNDPREGDYPPEAQGMRPE*LGRLKA
Trigger: TGCTTTCAGTCTGCCCAGCCATTCAGGTCGCATTCC...TTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR CAA 72 bp CGCTGTGGCATGCACCTCCATAAAGACTGGCAAATATaGGTAAAAGGTGGTGCTGTTTGTGTCCTTGTGGCG +
Preference number: 4 (lower is better)
Translates to: RCGMHLHKDWQI*VKGGAVCVLVA
Trigger: CGCCACAAGGACACAAACAGCACCACCTTTTACCAATATTTGCCAGTCTTTATGGAGGTGCATGCCACAGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430669.6
CDS-3UTR TCA 90 bp TGGGGTCCTGGATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGATTAAATAAGAGTCTCTaGAACTTCGCTCTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: WGPGWQPMIIRDAVDTRRLNKSL*NFALSH
Trigger: GTGGCTGAGAGCGAAGTTTCAGAGACTCTTATTTAA...TCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCATCCAGGACCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp AAGAGCACTAATGACGGGGAGGATGGAGACAATGTTTGGATTTACTTAGGAAGCCGAAGGCCCCAAATATaGGGAGGCCCACAACCAAGA +
Preference number: 4 (lower is better)
Translates to: KSTNDGEDGDNVWIYLGSRRPQI*GGPQPR
Trigger: TCTTGGTTGTGGGCCTCCTCATATTTGGGGCCTTCG...GCTTCCTAAGTAAATCCAAACATTGTCTCCATCCTCCCCGTCATTAGTGCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp TTCCACTGCCTGTTGTACATGTATACATGGACACGGCTGGCCTGGAGTGCCGAGGTCTGTATCATGAGTTaGGGATTAAACATAGCCTCT +
Preference number: 4 (lower is better)
Translates to: FHCLLYMYTWTRLAWSAEVCIMS*GLNIAS
Trigger: AGAGGCTATGTTTAATCCTCAACTCATGATACAGAC...CTCGGCACTCCAGGCCAGCCGTGTCCATGTATACATGTACAACAGGCAGTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551623.1
CDS-3UTR TCA 90 bp CCACTGCCTGTTGTACATGTATACATGGACACGGCTGGCCTGGAGTGCCGAGTCTGTGATAAGCTCTCCTaGTTTGTAACACAAATGTTC +
Preference number: 4 (lower is better)
Translates to: PLPVVHVYMDTAGLECRVCDKLS*FVTQMF
Trigger: GAACATTTGTGTTACAAATCAGGAGAGCTTATCACA...GACTCGGCACTCCAGGCCAGCCGTGTCCATGTATACATGTACAACAGGCAGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551623.1
CDS-3UTR TCA 90 bp TGGGGTCCTGGATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAATCAAGAGGTTTGGTTaGATTTTTGTTGGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: WGPGWQPMIIRDAVDTRRIKRFG*IFVGGC
Trigger: ACAGCCCCCAACAAAAATTCAACCAAACCTCTTGAT...TCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCATCCAGGACCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp ATGATGCCATCTGCATCCACCAGACGCTGTTTAGTCAACTGGCTGATGTCGATGGTTCCAGTTGATGTGTaGGACATACTCGTACCCCTT +
Preference number: 4 (lower is better)
Translates to: MMPSASTRRCLVNWLMSMVPVDV*DILVPL
Trigger: AAGGGGTACGAGTATGTCTCACACATCAACTGGAAC...CATCGACATCAGCCAGTTGACTAAACAGCGTCTGGTGGATGCAGATGGCATCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR TCA 90 bp ATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAGTCTAGCTTTTTCTGTCCTGTTTCACTaGAGGCGTGGGCCAGAAGAA +
Preference number: 4 (lower is better)
Translates to: MAANDHKRCRRHEESLAFSVLFH*RRGPEE
Trigger: TTCTTCTGGCCCACGCCTTCAGTGAAACAGGACAGA...AAAAGCTAGACTCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp ATGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACGAATTGCAGGAAAAATaGGCAGAACCATGGCAAAAT +
Preference number: 4 (lower is better)
Translates to: MAQPRLSTRHVTEFSNTHELQEK*AEPWQN
Trigger: ATTTTGCCATGGTTCTGCTCATTTTTCCTGCAATTC...GTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp CAGAGTTCTATCCAAGAGCAGGTCCCTCACAAAGCCATGGAGGCTGCTCAAAGACTTCTCAGCAAAAGATaGGAGTGTCCACTTCGTACA +
Preference number: 4 (lower is better)
Translates to: QSSIQEQVPHKAMEAAQRLLSKR*ECPLRT
Trigger: TGTACGAAGTGGACACTCTCATCTTTTGCTGAGAAG...TCTTTGAGCAGCCTCCATGGCTTTGTGAGGGACCTGCTCTTGGATAGAACTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR TCA 90 bp ACACGCACAGCCAAACAAGAGGACCGCACACAACGACACCTAGAGAAGCCACCAAGTCTGCTTTCTGGGTaGCTATATACATGTTGTAGA +
Preference number: 4 (lower is better)
Translates to: TRTAKQEDRTQRHLEKPPSLLSG*LYTCCR
Trigger: TCTACAACATGTATATAGTCACCCAGAAAGCAGACT...TGGTGGCTTCTCTAGGTGTCGTTGTGTGCGGTCCTCTTGTTTGGCTGTGCGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp ATGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACAGTCTGCTTTCTGGGTaGCTATATACATGTTGTAGA +
Preference number: 4 (lower is better)
Translates to: MAQPRLSTRHVTEFSNTHSLLSG*LYTCCR
Trigger: TCTACAACATGTATATAGTCACCCAGAAAGCAGACT...GTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp CCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAACCTGAAGCCAGTCTCTaGAGTAGTGCAGCCACATTT +
Preference number: 4 (lower is better)
Translates to: PASITMIREKEIIPLKHKPEASL*SSAATF
Trigger: AAATGTGGCTGCACTACTTCAGAGACTGGCTTCAGG...TTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp AAGAGCACTAATGACGGGGAGGATGGAGACAATGTTTGGATTTACTTAGGAAGCCGTCCTGCAGCTCAATaGCTTCCACCTTCGAATCCC +
Preference number: 4 (lower is better)
Translates to: KSTNDGEDGDNVWIYLGSRPAAQ*LPPSNP
Trigger: GGGATTCGAAGGTGGAAGTCATTGAGCTGCAGGACG...GCTTCCTAAGTAAATCCAAACATTGTCTCCATCCTCCCCGTCATTAGTGCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp TCCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAAGGAGATTATCCCCCTaGAGCACAAATTGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: SSIHHNDPREGDYPPEAQRRLSP*STNWGP
Trigger: AGGACCCCAATTTGTGCTTCAGGGGGATAATCTCCT...TTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp AAGAGCACTAATGACGGGGAGGATGGAGACAATGTTTGGATTTACTTAGGAAGCGAGAGTCGGCCTCGATaGGCCATCAGTATGTACTGG +
Preference number: 4 (lower is better)
Translates to: KSTNDGEDGDNVWIYLGSESRPR*AISMYW
Trigger: CCAGTACATACTGATGGCTCATCGAGGCCGACTCTC...GCTTCCTAAGTAAATCCAAACATTGTCTCCATCCTCCCCGTCATTAGTGCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR TCA 90 bp ATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATTGGGGTCCTGGATGGCAGTGGGGACTCGAATATaGAATCTGAGCACGTCATTT +
Preference number: 4 (lower is better)
Translates to: IREKEIIPLKHKLGSWMAVGTRI*NLSTSF
Trigger: AAATGACGTGCTCAGATTTCATATTCGAGTCCCCAC...TGCCATCCAGGACCCCAATTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR TCA 90 bp ATGATGCCATCTGCATCCACCAGACGCTGTTTAGTCAACTGGCTGATGTCGATGACAACCTCTCAGTACTaGAGCGTGCCAAACAAACCA +
Preference number: 4 (lower is better)
Translates to: MMPSASTRRCLVNWLMSMTTSQY*SVPNKP
Trigger: TGGTTTGTTTGGCACGCTTCAGTACTGAGAGGTTGT...CATCGACATCAGCCAGTTGACTAAACAGCGTCTGGTGGATGCAGATGGCATCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR TCA 90 bp CCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAAAATGGCTGGGCAGACTaGAAGCACAAACACAATGCC +
Preference number: 4 (lower is better)
Translates to: PASITMIREKEIIPLKHKNGWAD*KHKHNA
Trigger: GGCATTGTGTTTGTGCTTTCAGTCTGCCCAGCCATT...TTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR TCA 90 bp ATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAGTCTAGCTTTTCCTGTCAGGGTCACGTaGCGGATCCGAAAACTTTAC +
Preference number: 4 (lower is better)
Translates to: MAANDHKRCRRHEESLAFPVRVT*RIRKLY
Trigger: GTAAAGTTTTCGGATCCGTCACGTGACCCTGACAGG...AAAAGCTAGACTCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430669.6
CDS-3UTR GCA 90 bp TGGGGTCCTGGATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAAACTCCTCCTGCCAGTaGATATACTTTCTGGATAAG +
Preference number: 4 (lower is better)
Translates to: WGPGWQPMIIRDAVDTRRNSSCQ*IYFLDK
Trigger: CTTATCCAGAAAGTATATGCACTGGCAGGAGGAGTT...TCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCATCCAGGACCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp ACACGCACAGCCAAACAAGAGGACCGCACACAACGACACCTAGAGAAGCCACCACAAAACCTGAGTTGTTaGAGCGTTAAAGGAAATTCC +
Preference number: 4 (lower is better)
Translates to: TRTAKQEDRTQRHLEKPPQNLSC*SVKGNS
Trigger: GGAATTTCCTTTAACGCTGCAACAACTCAGGTTTTG...TGGTGGCTTCTCTAGGTGTCGTTGTGTGCGGTCCTCTTGTTTGGCTGTGCGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp ACACGCACAGCCAAACAAGAGGACCGCACACAACGACACCTAGAGAAGCCACCAGATATTCGGGTAGTCTaGTTTCTGGGTGACTATATA +
Preference number: 4 (lower is better)
Translates to: TRTAKQEDRTQRHLEKPPDIRVV*FLGDYI
Trigger: TATATAGTCACCCAGAAAGCAGACTACCCGAATATC...TGGTGGCTTCTCTAGGTGTCGTTGTGTGCGGTCCTCTTGTTTGGCTGTGCGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp AGGATGGTGAGGATCGCCAGCACAGCAAAGAAATACCTGGGAGATCAAGAGGAACCAGTCACTGTCAAATaGATCCTGAAGTCCCTGAAG +
Preference number: 4 (lower is better)
Translates to: RMVRIASTAKKYLGDQEEPVTVK*ILKSLK
Trigger: CTTCAGGGACTTCAGGATGCATTTGACAGTGACTGG...TTCCTCTTGATCTCCCAGGTATTTCTTTGCTGTGCTGGCGATCCTCACCATCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR GCA 90 bp TGGGGTCCTGGATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAGGCTCGTATAGTTGCTaGAGATGGTCCTTACTTTTT +
Preference number: 4 (lower is better)
Translates to: WGPGWQPMIIRDAVDTRRGSYSC*RWSLLF
Trigger: AAAAAGTAAGGACCATCTGCAGCAACTATACGAGCC...TCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCATCCAGGACCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp ATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAGTCTAGCTTTTTCGCATTCCACGTCCTaGAGCTCAATGACTTCCACC +
Preference number: 4 (lower is better)
Translates to: MAANDHKRCRRHEESLAFSHSTS*SSMTST
Trigger: GGTGGAAGTCATTGAGCTGCAGGACGTGGAATGCGA...AAAAGCTAGACTCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp AGCACAGCAAAGAAATACCTGGGAGATCAAGAGGAAACGGGAACACGCGCTGTGGGGCACCATGCTGCATaGTTTTTAGAGTATACAGAC +
Preference number: 4 (lower is better)
Translates to: STAKKYLGDQEETGTRAVGHHAA*FLEYTD
Trigger: GTCTGTATACTCTAAAAAGCATGCAGCATGGTGCCC...CACAGCGCGTGTTCCCGTTTCCTCTTGATCTCCCAGGTATTTCTTTGCTGTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR GCA 90 bp CCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATCGACTTCAGAATTCTaGATCATCCCTCCTCCACGC +
Preference number: 4 (lower is better)
Translates to: PASITMIREKEIIPLKHKSTSEF*IIPPPR
Trigger: GCGTGGAGGAGGGATGATGCAGAATTCTGAAGTCGA...TTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp CCAGGCTCGTATAGTTGCTGCAGATGGTCCTTACTTTTTCAATTGCCTCCACAAGTTCGAGCAATTCTCTaGCTCAGCCTCCCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: PGSYSCCRWSLLFQLPPQVRAIL*LSLPSS
Trigger: GCTACTTGGGAGGCTGAGGCAGAGAATTGCTCGAAC...TTGTGGAGGCAATTGAAAAAGTAAGGACCATCTGCAGCAACTATACGAGCCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR GCA 90 bp AGCACAGCAAAGAAATACCTGGGAGATCAAGAGGAAACGGGAACACGCGCTGTGGGAACAGGCAACCAGTaGTGCCATGTCTATATATGT +
Preference number: 4 (lower is better)
Translates to: STAKKYLGDQEETGTRAVGTGNQ*CHVYIC
Trigger: ACATATATAGACATGGCAGCACTGGTTGCCTGTTCC...CACAGCGCGTGTTCCCGTTTCCTCTTGATCTCCCAGGTATTTCTTTGCTGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR GCA 90 bp CAGAGTTCTATCCAAGAGCAGGTCCCTCACAAAGCCATGGAGGCTGCTCAAAGATTTCTGCAAAGAAAATaGTGCCCATTCTGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: QSSIQEQVPHKAMEAAQRFLQRK*CPFCGS
Trigger: GCTCCCACAGAATGGGCAGCATTTTCTTTGCAGAAA...TCTTTGAGCAGCCTCCATGGCTTTGTGAGGGACCTGCTCTTGGATAGAACTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CCA 90 bp AAGAGCACTAATGACGGGGAGGATGGAGACAATGTTTGGATTTACTTAGGAAGCACAGCTCCTCCACGTTaGTCTCGAGGTTCGCTGCTT +
Preference number: 4 (lower is better)
Translates to: KSTNDGEDGDNVWIYLGSTAPPR*SRGSLL
Trigger: AAGCAGCGAACCTCGAGACCAACGTGGAGGAGCTGT...GCTTCCTAAGTAAATCCAAACATTGTCTCCATCCTCCCCGTCATTAGTGCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp ATGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCCATATCAAGAGGTTTaGTTGAATTTTTGTTGGGGG +
Preference number: 4 (lower is better)
Translates to: MAQPRLSTRHVTEFSNTHPYQEV*LNFCWG
Trigger: CCCCCAACAAAAATTCAACCAAACCTCTTGATATGG...GTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp ATGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACAGTGCATATACTTTCTaGATAAGCCATGACATCCAC +
Preference number: 4 (lower is better)
Translates to: MAQPRLSTRHVTEFSNTHSAYTF*ISHDIH
Trigger: GTGGATGTCATGGCTTATCCAGAAAGTATATGCACT...GTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp TGGGGTCCTGGATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAGCTCGTACATTTGCTTaGGAGTCATTAACTGGAACA +
Preference number: 4 (lower is better)
Translates to: WGPGWQPMIIRDAVDTRRARTFA*ESLTGT
Trigger: TGTTCCAGTTAATGACTCCCAAGCAAATGTACGAGC...TCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCATCCAGGACCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp ACACGCACAGCCAAACAAGAGGACCGCACACAACGACACCTAGAGAAGCCACCAAGTGCAGCCACATTTTaGGAAGCTGTTTGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: TRTAKQEDRTQRHLEKPPSAATF*EAVCFL
Trigger: AAGAAAACAAACAGCTTCCCAAAATGTGGCTGCACT...TGGTGGCTTCTCTAGGTGTCGTTGTGTGCGGTCCTCTTGTTTGGCTGTGCGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp TGCCTGGATTCGGGATGGACCACAGTGGAGTGGGCGAAGACGGGGTTTTCTGTGTATAGTTGCTGCAGATaGTCCTTACTTTTTCAATTG +
Preference number: 4 (lower is better)
Translates to: CLDSGWTTVEWAKTGFSVYSCCR*SLLFQL
Trigger: CAATTGAAAAAGTAAGGACCATCTGCAGCAACTATA...CACAGAAAACCCCGTCTTCGCCCACTCCACTGTGGTCCATCCCGAATCCAGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CCA 90 bp AGGATGGTGAGGATCGCCAGCACAGCAAAGAAATACCTGGGAGATCAAGAGGAACACAAATTGGGGTCCTaGATGGCAGCCAATGATCAT +
Preference number: 4 (lower is better)
Translates to: RMVRIASTAKKYLGDQEEHKLGS*MAANDH
Trigger: ATGATCATTGGCTGCCATCCAGGACCCCAATTTGTG...TTCCTCTTGATCTCCCAGGTATTTCTTTGCTGTGCTGGCGATCCTCACCATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CCA 90 bp ATGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACATTTCTGGGAGACTGTaGGCCAAGAAAGAATTAACT +
Preference number: 4 (lower is better)
Translates to: MAQPRLSTRHVTEFSNTHISGRL*AKKELT
Trigger: AGTTAATTCTTTCTTGGCCCACAGTCTCCCAGAAAT...GTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp ATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAGTCTAGCTTTTAACAAGGTGCTGGTGTaGATTTGGATGGGGAGCCGA +
Preference number: 4 (lower is better)
Translates to: MAANDHKRCRRHEESLAFNKVLV*IWMGSR
Trigger: TCGGCTCCCCATCCAAATCCACACCAGCACCTTGTT...AAAAGCTAGACTCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp ATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAGTCTAGCTTTTAGCTGGGTGTTAGGATaGCAGACCATGTGGGTGACA +
Preference number: 4 (lower is better)
Translates to: MAANDHKRCRRHEESLAFSWVLG*QTMWVT
Trigger: TGTCACCCACATGGTCTGCCATCCTAACACCCAGCT...AAAAGCTAGACTCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp AAGAGCACTAATGACGGGGAGGATGGAGACAATGTTTGGATTTACTTAGGAAGCACCTCTCCCTTCATCTaGGGGCTGGTTACACGGATG +
Preference number: 4 (lower is better)
Translates to: KSTNDGEDGDNVWIYLGSTSPFI*GLVTRM
Trigger: CATCCGTGTAACCAGCCCCCAGATGAAGGGAGAGGT...GCTTCCTAAGTAAATCCAAACATTGTCTCCATCCTCCCCGTCATTAGTGCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430669.6
3UTR CAA 72 bp ATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATaGGGGTCCTGGATGGCAGCCAATGATCATAAGAGA +
Preference number: 4 (lower is better)
Translates to: IREKEIIPLKHK*GSWMAANDHKR
Trigger: TCTCTTATGATCATTGGCTGCCATCCAGGACCCCAATTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000418258.5
ENST00000421141.5
ENST00000429896.6
ENST00000430669.6
ENST00000437951.5
3UTR CAA 72 bp TGGGTGATCCTTTGGCTTCAAGCTGCAGAGTTGTCTTaGCTGCCAGCCCCAAATCCTTTACCTTCTGTTTTC +
Preference number: 4 (lower is better)
Translates to: WVILWLQAAELS*LPAPNPLPSVF
Trigger: GAAAACAGAAGGTAAAGGATTTGGGGCTGGCAGCAAAGACAACTCTGCAGCTTGAAGCCAAAGGATCACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR CAA 72 bp ACCTATTGGGTGATCCTTTGGCTTCAAGCTGCAGAGTaGTCTTTGCTGCCAGCCCCAAATCCTTTACCTTCT +
Preference number: 4 (lower is better)
Translates to: TYWVILWLQAAE*SLLPAPNPLPS
Trigger: AGAAGGTAAAGGATTTGGGGCTGGCAGCAAAGACAACTCTGCAGCTTGAAGCCAAAGGATCACCCAATAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR TCA 90 bp ATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATTGGGGTCCTGGATGGCATTAAATAAGAGTCTCTaGAACTTCGCTCTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: IREKEIIPLKHKLGSWMALNKSL*NFALSH
Trigger: GTGGCTGAGAGCGAAGTTTCAGAGACTCTTATTTAA...TGCCATCCAGGACCCCAATTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp ATGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACTGTGATAAGCTCTCCTaGTTTGTAACACAAATGTTC +
Preference number: 4 (lower is better)
Translates to: MAQPRLSTRHVTEFSNTHCDKLS*FVTQMF
Trigger: GAACATTTGTGTTACAAATCAGGAGAGCTTATCACA...GTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331920.11
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp CCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAACATACTCGTACCCCTTaGAGTGCTCGTACATTTGCT +
Preference number: 4 (lower is better)
Translates to: PASITMIREKEIIPLKHKHTRTP*SARTFA
Trigger: AGCAAATGTACGAGCACTTCAAGGGGTACGAGTATG...TTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp TCCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAAAGGAAAGCACCTTTTaGGTGGAGTTCTGTGCGACA +
Preference number: 4 (lower is better)
Translates to: SSIHHNDPREGDYPPEAQKESTF*VEFCAT
Trigger: TGTCGCACAGAACTCCACTCAAAAGGTGCTTTCCTT...TTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp ACAGCGATTCCACTTCACCATTCACTCTATGCAAAAACTACAATAAGCAAGCTTCAGTCCTGCAGCCACTaGCAGTGCAACCAGCAGGAC +
Preference number: 4 (lower is better)
Translates to: TAIPLHHSLYAKTTISKLQSCSH*QCNQQD
Trigger: GTCCTGCTGGTTGCACTGTCAGTGGCTGCAGGACTG...AAGCTTGCTTATTGTAGTTTTTGCATAGAGTGAATGGTGAAGTGGAATCGCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR TCA 90 bp ATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATTGGGGTCCTGGATGGCAAGAAATGGCAAAACCTaGGTTGTTGCAGCGTTAAAG +
Preference number: 4 (lower is better)
Translates to: IREKEIIPLKHKLGSWMARNGKT*VVAALK
Trigger: CTTTAACGCTGCAACAACTCAGGTTTTGCCATTTCT...TGCCATCCAGGACCCCAATTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp ATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAGTCTAGCTTTTCCTGAAGCCAGTCTCTaGAGTAGTGCAGCCACATTT +
Preference number: 4 (lower is better)
Translates to: MAANDHKRCRRHEESLAFPEASL*SSAATF
Trigger: AAATGTGGCTGCACTACTTCAGAGACTGGCTTCAGG...AAAAGCTAGACTCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp CACATCGGTGTGAGAAGCGCTGGTCTACAGCGATTCCACTTCACCATTCACTCTTGTAATTGTTTGGCATaGTTTTCCCGGTTTCCCAGT +
Preference number: 4 (lower is better)
Translates to: HIGVRSAGLQRFHFTIHSCNCLA*FSRFPS
Trigger: ACTGGGAAACCGGGAAAATCATGCCAAACAATTACA...AGAGTGAATGGTGAAGTGGAATCGCTGTAGACCAGCGCTTCTCACACCGATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR TCA 90 bp TGGGGTCCTGGATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAAAGGACTCCATCGTCTaGTCCATTCTTGTAATTGTT +
Preference number: 4 (lower is better)
Translates to: WGPGWQPMIIRDAVDTRRKDSIV*SILVIV
Trigger: AACAATTACAAGAATGGATCAGACGATGGAGTCCTT...TCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCATCCAGGACCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp AAGAGCACTAATGACGGGGAGGATGGAGACAATGTTTGGATTTACTTAGGAAGCAAGGCCAAAGCAACGTaGACGGTGAACTCCACTCCT +
Preference number: 4 (lower is better)
Translates to: KSTNDGEDGDNVWIYLGSKAKAT*TVNSTP
Trigger: AGGAGTGGAGTTCACCGTTCACGTTGCTTTGGCCTT...GCTTCCTAAGTAAATCCAAACATTGTCTCCATCCTCCCCGTCATTAGTGCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp ATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAGTCTAGCTTTTAGGAGATTATCCCCCTaGAGCACAAATTGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: MAANDHKRCRRHEESLAFRRLSP*STNWGP
Trigger: AGGACCCCAATTTGTGCTTCAGGGGGATAATCTCCT...AAAAGCTAGACTCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp CAGAGTTCTATCCAAGAGCAGGTCCCTCACAAAGCCATGGAGGCTGCTCAAAGAGGCCAATTAGATTTCTaGCGGCTTAGCATATACAGT +
Preference number: 4 (lower is better)
Translates to: QSSIQEQVPHKAMEAAQRGQLDF*RLSIYS
Trigger: ACTGTATATGCTAAGCCGTCAGAAATCTAATTGGCC...TCTTTGAGCAGCCTCCATGGCTTTGTGAGGGACCTGCTCTTGGATAGAACTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR GCA 90 bp ACACGCACAGCCAAACAAGAGGACCGCACACAACGACACCTAGAGAAGCCACCATGTTCCAATTTCCACTaGCTGTTGTACATGTATACA +
Preference number: 4 (lower is better)
Translates to: TRTAKQEDRTQRHLEKPPCSNFH*LLYMYT
Trigger: TGTATACATGTACAACAGGCAGTGGAAATTGGAACA...TGGTGGCTTCTCTAGGTGTCGTTGTGTGCGGTCCTCTTGTTTGGCTGTGCGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331920.11
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp ATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATTGGGGTCCTGGATGGCAAACTCCTCCTGCCAGTaGATATACTTTCTGGATAAG +
Preference number: 4 (lower is better)
Translates to: IREKEIIPLKHKLGSWMANSSCQ*IYFLDK
Trigger: CTTATCCAGAAAGTATATGCACTGGCAGGAGGAGTT...TGCCATCCAGGACCCCAATTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp ATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATTGGGGTCCTGGATGGCAACAATCAACTCCTCCTaGCAGTGCATATACTTTCTG +
Preference number: 4 (lower is better)
Translates to: IREKEIIPLKHKLGSWMATINSS*QCIYFL
Trigger: CAGAAAGTATATGCACTGGCAGGAGGAGTTGATTGT...TGCCATCCAGGACCCCAATTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp ATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATTGGGGTCCTGGATGGCAAAGTGCTCGTACATTTaGTTGGGAGTCATTAACTGG +
Preference number: 4 (lower is better)
Translates to: IREKEIIPLKHKLGSWMAKCSYI*LGVINW
Trigger: CCAGTTAATGACTCCCAAGCAAATGTACGAGCACTT...TGCCATCCAGGACCCCAATTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp TCCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAATCGTACCCCTTGAAGTaGTCGTACATTTGCTTGGGA +
Preference number: 4 (lower is better)
Translates to: SSIHHNDPREGDYPPEAQSYPLK*SYICLG
Trigger: TCCCAAGCAAATGTACGAGCACTTCAAGGGGTACGA...TTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp CCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATCGTACCCCTTGAAGTaGTCGTACATTTGCTTGGGA +
Preference number: 4 (lower is better)
Translates to: PASITMIREKEIIPLKHKSYPLK*SYICLG
Trigger: TCCCAAGCAAATGTACGAGCACTTCAAGGGGTACGA...TTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp TGGGGTCCTGGATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGACAAAACCTGAGTTGTTaGAGCGTTAAAGGAAATTCC +
Preference number: 4 (lower is better)
Translates to: WGPGWQPMIIRDAVDTRRQNLSC*SVKGNS
Trigger: GGAATTTCCTTTAACGCTGCAACAACTCAGGTTTTG...TCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCATCCAGGACCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp CCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAAGACTGCATGGTAATCTaGGTTTCATGGGCAAAGCTG +
Preference number: 4 (lower is better)
Translates to: PASITMIREKEIIPLKHKDCMVI*VSWAKL
Trigger: CAGCTTTGCCCATGAAACGCAGATTACCATGCAGTC...TTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp TGGGGTCCTGGATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAGATATTCGGGTAGTCTaGTTTCTGGGTGACTATATA +
Preference number: 4 (lower is better)
Translates to: WGPGWQPMIIRDAVDTRRDIRVV*FLGDYI
Trigger: TATATAGTCACCCAGAAAGCAGACTACCCGAATATC...TCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCATCCAGGACCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp TCCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAACCAGGCTCGTATAGTTaGTGCAGATGGTCCTTACTT +
Preference number: 4 (lower is better)
Translates to: SSIHHNDPREGDYPPEAQPGSYS*CRWSLL
Trigger: AAGTAAGGACCATCTGCAGCAACTATACGAGCCTGG...TTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp TCCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAACAGTAACAATGAACTaGTGTCCTGGCACAGGGCAT +
Preference number: 4 (lower is better)
Translates to: SSIHHNDPREGDYPPEAQTVTMN*CPGTGH
Trigger: ATGCCCTGTGCCAGGACAGCAGTTCATTGTTACTGT...TTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp CCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAAGACTCCACGCAGGGATaGGTTTCTGGAACTAATGAT +
Preference number: 4 (lower is better)
Translates to: PASITMIREKEIIPLKHKDSTQG*VSGTND
Trigger: ATCATTAGTTCCAGAAACGCATCCCTGCGTGGAGTC...TTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CCA 90 bp AGCGCTTCTGTGGTCAGGACATTAGCACCTTCTTCTTTAGGGGTCTGTATCATGTTGTACATGTATACATaGACACGGCTGGCCTGGAGT +
Preference number: 4 (lower is better)
Translates to: SASVVRTLAPSSLGVCIMLYMYT*TRLAWS
Trigger: ACTCCAGGCCAGCCGTGTCCATGTATACATGTACAA...CATGATACAGACCCCTAAAGAAGAAGGTGCTAATGTCCTGACCACAGAAGCGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551623.1
CDS-3UTR CCA 90 bp CCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATTGGGAGTCATTAACTaGAACATGGTCTGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: PASITMIREKEIIPLKHKLGVIN*NMVCRA
Trigger: TGCCCTGCAGACCATGTTCCAGTTAATGACTCCCAA...TTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp ATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATTGGGGTCCTGGATGGCAGCTCGTACATTTGCTTaGGAGTCATTAACTGGAACA +
Preference number: 4 (lower is better)
Translates to: IREKEIIPLKHKLGSWMAARTFA*ESLTGT
Trigger: TGTTCCAGTTAATGACTCCCAAGCAAATGTACGAGC...TGCCATCCAGGACCCCAATTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp ATGATGCCATCTGCATCCACCAGACGCTGTTTAGTCAACTGGCTGATGTCGATGGTTTCACTGAAGGCGTaGGCCAGAAGAAAAACATCA +
Preference number: 4 (lower is better)
Translates to: MMPSASTRRCLVNWLMSMVSLKA*ARRKTS
Trigger: TGATGTTTTTCTTCTGGCCCACGCCTTCAGTGAAAC...CATCGACATCAGCCAGTTGACTAAACAGCGTCTGGTGGATGCAGATGGCATCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CCA 90 bp ATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAGTCTAGCTTTTGTAATCTGCGTTTCATaGGCAAAGCTGTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: MAANDHKRCRRHEESLAFVICVS*AKLWLL
Trigger: CAGCAGCCACAGCTTTGCCCATGAAACGCAGATTAC...AAAAGCTAGACTCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp AAAGACTGGCAAATATTGGTAAAAGGTGGTGCTGTTTGTGTCCTTGTGGCGCTGGTAATCTGCGTTTCATaGGCAAAGCTGTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: KDWQILVKGGAVCVLVALVICVS*AKLWLL
Trigger: CAGCAGCCACAGCTTTGCCCATGAAACGCAGATTAC...CAGCGCCACAAGGACACAAACAGCACCACCTTTTACCAATATTTGCCAGTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430669.6
CDS-3UTR CCA 90 bp TGGGGTCCTGGATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAAGTGCAGCCACATTTTaGGAAGCTGTTTGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: WGPGWQPMIIRDAVDTRRSAATF*EAVCFL
Trigger: AAGAAAACAAACAGCTTCCCAAAATGTGGCTGCACT...TCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCATCCAGGACCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp ACTCTGCATGGCTGGAGGGCACAGACTCCACGCAGGGATGCGTTTCTGGAACTAATTCTTGTAATTGTTTaGCATGATTTTCCCGGTTTC +
Preference number: 4 (lower is better)
Translates to: TLHGWRAQTPRRDAFLELILVIV*HDFPGF
Trigger: GAAACCGGGAAAATCATGCCAAACAATTACAAGAAT...TAGTTCCAGAAACGCATCCCTGCGTGGAGTCTGTGCCCTCCAGCCATGCAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CCA 90 bp AAGAGCACTAATGACGGGGAGGATGGAGACAATGTTTGGATTTACTTAGGAAGCCCTGACACTGTCGTCTaGGAACTATACTCCGAGTCG +
Preference number: 4 (lower is better)
Translates to: KSTNDGEDGDNVWIYLGSPDTVV*ELYSES
Trigger: CGACTCGGAGTATAGTTCCCAGACGACAGTGTCAGG...GCTTCCTAAGTAAATCCAAACATTGTCTCCATCCTCCCCGTCATTAGTGCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp TCCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAAATGAACTGCTGTCCTaGCACAGGGCATCTTTTCCA +
Preference number: 4 (lower is better)
Translates to: SSIHHNDPREGDYPPEAQNELLS*HRASFP
Trigger: TGGAAAAGATGCCCTGTGCCAGGACAGCAGTTCATT...TTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp ATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAGTCTAGCTTTTTGCTGTGGGTATTTCTaGGGGCCCATTACCTTTCTG +
Preference number: 4 (lower is better)
Translates to: MAANDHKRCRRHEESLAFCCGYF*GPITFL
Trigger: CAGAAAGGTAATGGGCCCCCAGAAATACCCACAGCA...AAAAGCTAGACTCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp AAGAGCACTAATGACGGGGAGGATGGAGACAATGTTTGGATTTACTTAGGAAGCAGCTGGGTGTTAGGATaGCAGACCATGTGGGTGACA +
Preference number: 4 (lower is better)
Translates to: KSTNDGEDGDNVWIYLGSSWVLG*QTMWVT
Trigger: TGTCACCCACATGGTCTGCCATCCTAACACCCAGCT...GCTTCCTAAGTAAATCCAAACATTGTCTCCATCCTCCCCGTCATTAGTGCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp AAGGGTCGAAGTTTGTCCACCGCAAAGGAGGTTTACCTAGGAGGTATGCTGTCCGTCTGTATCATGAGTTaGGGATTAAACATAGCCTCT +
Preference number: 4 (lower is better)
Translates to: KGRSLSTAKEVYLGGMLSVCIMS*GLNIAS
Trigger: AGAGGCTATGTTTAATCCTCAACTCATGATACAGAC...GGACAGCATACCTCCTAGGTAAACCTCCTTTGCGGTGGACAAACTTCGACCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550914.6
CDS-3UTR TCA 90 bp ATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAGTCTAGCTTTTCATACTCGTACCCCTTaGAGTGCTCGTACATTTGCT +
Preference number: 4 (lower is better)
Translates to: MAANDHKRCRRHEESLAFHTRTP*SARTFA
Trigger: AGCAAATGTACGAGCACTTCAAGGGGTACGAGTATG...AAAAGCTAGACTCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp ATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAGTCTAGCTTTTGTTCCAGTTGATGTGTaGGACATACTCGTACCCCTT +
Preference number: 4 (lower is better)
Translates to: MAANDHKRCRRHEESLAFVPVDV*DILVPL
Trigger: AAGGGGTACGAGTATGTCTCACACATCAACTGGAAC...AAAAGCTAGACTCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp AAAGACTGGCAAATATTGGTAAAAGGTGGTGCTGTTTGTGTCCTTGTGGCGCTGGTTCCAGTTGATGTGTaGGACATACTCGTACCCCTT +
Preference number: 4 (lower is better)
Translates to: KDWQILVKGGAVCVLVALVPVDV*DILVPL
Trigger: AAGGGGTACGAGTATGTCTCACACATCAACTGGAAC...CAGCGCCACAAGGACACAAACAGCACCACCTTTTACCAATATTTGCCAGTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430669.6
CDS-3UTR TCA 90 bp ATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAGTCTAGCTTTTGAACCATGGCAAAATTaGACACCACTACTACCGCTG +
Preference number: 4 (lower is better)
Translates to: MAANDHKRCRRHEESLAFEPWQN*TPLLPL
Trigger: CAGCGGTAGTAGTGGTGTTCAATTTTGCCATGGTTC...AAAAGCTAGACTCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp AAGAGCACTAATGACGGGGAGGATGGAGACAATGTTTGGATTTACTTAGGAAGCAAGCAACGTGAACGGTaGACTCCACTCCTATGCCAA +
Preference number: 4 (lower is better)
Translates to: KSTNDGEDGDNVWIYLGSKQRER*TPLLCQ
Trigger: TTGGCATAGGAGTGGAGTTCACCGTTCACGTTGCTT...GCTTCCTAAGTAAATCCAAACATTGTCTCCATCCTCCCCGTCATTAGTGCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp AAGAGCACTAATGACGGGGAGGATGGAGACAATGTTTGGATTTACTTAGGAAGCAGGAGATTATCCCCCTaGAGCACAAATTGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: KSTNDGEDGDNVWIYLGSRRLSP*STNWGP
Trigger: AGGACCCCAATTTGTGCTTCAGGGGGATAATCTCCT...GCTTCCTAAGTAAATCCAAACATTGTCTCCATCCTCCCCGTCATTAGTGCTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp CCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAACAGCATCCATCACAATaGTCCGAGAGAAGGAGATTA +
Preference number: 4 (lower is better)
Translates to: PASITMIREKEIIPLKHKQHPSQ*SERRRL
Trigger: TAATCTCCTTCTCTCGGATCATTGTGATGGATGCTG...TTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp CCAGGCTCGTATAGTTGCTGCAGATGGTCCTTACTTTTTCAATTGCCTCCACAACATGATGAACTGATGTaGGCTCCATACCCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: PGSYSCCRWSLLFQLPPQHDELM*APYPEV
Trigger: AACCTCAGGGTATGGAGCTCACATCAGTTCATCATG...TTGTGGAGGCAATTGAAAAAGTAAGGACCATCTGCAGCAACTATACGAGCCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR TCA 90 bp ATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATTGGGGTCCTGGATGGCACTCGAATATGAAATCTaGGCACGTCATTTTCACTTC +
Preference number: 4 (lower is better)
Translates to: IREKEIIPLKHKLGSWMALEYEI*ARHFHF
Trigger: GAAGTGAAAATGACGTGCTCAGATTTCATATTCGAG...TGCCATCCAGGACCCCAATTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR GCA 90 bp TGGGGTCCTGGATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGATGTTCCAATTTCCACTaGCTGTTGTACATGTATACA +
Preference number: 4 (lower is better)
Translates to: WGPGWQPMIIRDAVDTRRCSNFH*LLYMYT
Trigger: TGTATACATGTACAACAGGCAGTGGAAATTGGAACA...TCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCATCCAGGACCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331920.11
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp ATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATTGGGGTCCTGGATGGCAGATATTCGGGTAGTCTaGTTTCTGGGTGACTATATA +
Preference number: 4 (lower is better)
Translates to: IREKEIIPLKHKLGSWMADIRVV*FLGDYI
Trigger: TATATAGTCACCCAGAAAGCAGACTACCCGAATATC...TGCCATCCAGGACCCCAATTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp ATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAGTCTAGCTTTTACAGTAACAATGAACTaGTGTCCTGGCACAGGGCAT +
Preference number: 4 (lower is better)
Translates to: MAANDHKRCRRHEESLAFTVTMN*CPGTGH
Trigger: ATGCCCTGTGCCAGGACAGCAGTTCATTGTTACTGT...AAAAGCTAGACTCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp AAAGACTGGCAAATATTGGTAAAAGGTGGTGCTGTTTGTGTCCTTGTGGCGCTGGGAGAGTCTAGCTTTTaGCGGGCTGATTTGAAAGGA +
Preference number: 4 (lower is better)
Translates to: KDWQILVKGGAVCVLVALGESSF*RADLKG
Trigger: TCCTTTCAAATCAGCCCGGCAAAAGCTAGACTCTCC...CAGCGCCACAAGGACACAAACAGCACCACCTTTTACCAATATTTGCCAGTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430669.6
CDS-3UTR GCA 90 bp TCCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAACGATGACGAGGTGCTaGAATCTACCAGATACAGAA +
Preference number: 4 (lower is better)
Translates to: SSIHHNDPREGDYPPEAQTMTRC*NLPDTE
Trigger: TTCTGTATCTGGTAGATTGCAGCACCTCGTCATCGT...TTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR GCA 90 bp ATGATGCCATCTGCATCCACCAGACGCTGTTTAGTCAACTGGCTGATGTCGATGTGTGGCATTTCTTTCTaGAGTGTTTCTAACCCGAGA +
Preference number: 4 (lower is better)
Translates to: MMPSASTRRCLVNWLMSMCGISF*SVSNPR
Trigger: TCTCGGGTTAGAAACACTGCAGAAAGAAATGCCACA...CATCGACATCAGCCAGTTGACTAAACAGCGTCTGGTGGATGCAGATGGCATCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR GCA 90 bp ATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAGTCTAGCTTTTTGGACACATCAGCCTTaGTCTGGGGATAAAAGGTCA +
Preference number: 4 (lower is better)
Translates to: MAANDHKRCRRHEESLAFWTHQP*SGDKRS
Trigger: TGACCTTTTATCCCCAGAGCAAGGCTGATGTGTCCA...AAAAGCTAGACTCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000430669.6
CDS-3UTR CCA 90 bp CACATCGGTGTGAGAAGCGCTGGTCTACAGCGATTCCACTTCACCATTCACTCTCCATATCAAGAGGTTTaGTTGAATTTTTGTTGGGGG +
Preference number: 4 (lower is better)
Translates to: HIGVRSAGLQRFHFTIHSPYQEV*LNFCWG
Trigger: CCCCCAACAAAAATTCAACCAAACCTCTTGATATGG...AGAGTGAATGGTGAAGTGGAATCGCTGTAGACCAGCGCTTCTCACACCGATGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CCA 90 bp TCCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAACCAAGAGCGAGAAATaGCAAAACCTGAGTTGTTGC +
Preference number: 4 (lower is better)
Translates to: SSIHHNDPREGDYPPEAQTKSEK*QNLSCC
Trigger: GCAACAACTCAGGTTTTGCCATTTCTCGCTCTTGGT...TTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp TCCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAACACTACCTTGGCTTTTaGTTTCAAGAGGAAAGGAGC +
Preference number: 4 (lower is better)
Translates to: SSIHHNDPREGDYPPEAQHYLGF*FQEERS
Trigger: GCTCCTTTCCTCTTGAAACCAAAAGCCAAGGTAGTG...TTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp ATGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACATTCTTGTAATTGTTTaGCATGATTTTCCCGGTTTC +
Preference number: 4 (lower is better)
Translates to: MAQPRLSTRHVTEFSNTHILVIV*HDFPGF
Trigger: GAAACCGGGAAAATCATGCCAAACAATTACAAGAAT...GTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp AAGAGCACTAATGACGGGGAGGATGGAGACAATGTTTGGATTTACTTAGGAAGCAGACGGGGTTTTCTGTaGCTTCCACGATCACTTGGT +
Preference number: 4 (lower is better)
Translates to: KSTNDGEDGDNVWIYLGSRRGFL*LPRSLG
Trigger: ACCAAGTGATCGTGGAAGCCACAGAAAACCCCGTCT...GCTTCCTAAGTAAATCCAAACATTGTCTCCATCCTCCCCGTCATTAGTGCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp AAGAGCACTAATGACGGGGAGGATGGAGACAATGTTTGGATTTACTTAGGAAGCTGCTGTGGGTATTTCTaGGGGCCCATTACCTTTCTG +
Preference number: 4 (lower is better)
Translates to: KSTNDGEDGDNVWIYLGSCCGYF*GPITFL
Trigger: CAGAAAGGTAATGGGCCCCCAGAAATACCCACAGCA...GCTTCCTAAGTAAATCCAAACATTGTCTCCATCCTCCCCGTCATTAGTGCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp TCCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAATTGCTGTTGTGCAAATaGCACTTATGGGGTGCTTGT +
Preference number: 4 (lower is better)
Translates to: SSIHHNDPREGDYPPEAQLLLCK*HLWGAC
Trigger: ACAAGCACCCCATAAGTGCCATTTGCACAACAGCAA...TTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR TCA 90 bp ATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATTGGGGTCCTGGATGGCATGTGATAAGCTCTCCTaGTTTGTAACACAAATGTTC +
Preference number: 4 (lower is better)
Translates to: IREKEIIPLKHKLGSWMACDKLS*FVTQMF
Trigger: GAACATTTGTGTTACAAATCAGGAGAGCTTATCACA...TGCCATCCAGGACCCCAATTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331920.11
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp CGCAAAGGAGGTTTACCTAGGAGGTATGCTGTCCCAGACTGTAATTTCGCCCCTTGTGATAAGCTCTCCTaGTTTGTAACACAAATGTTC +
Preference number: 4 (lower is better)
Translates to: RKGGLPRRYAVPDCNFAPCDKLS*FVTQMF
Trigger: GAACATTTGTGTTACAAATCAGGAGAGCTTATCACA...AGGGGCGAAATTACAGTCTGGGACAGCATACCTCCTAGGTAAACCTCCTTTGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550914.6
CDS-3UTR TCA 90 bp CCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAAATCAAGAGGTTTGGTTaGATTTTTGTTGGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: PASITMIREKEIIPLKHKIKRFG*IFVGGC
Trigger: ACAGCCCCCAACAAAAATTCAACCAAACCTCTTGAT...TTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp TCCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAAGAAATGGCAAAACCTaGGTTGTTGCAGCGTTAAAG +
Preference number: 4 (lower is better)
Translates to: SSIHHNDPREGDYPPEAQRNGKT*VVAALK
Trigger: CTTTAACGCTGCAACAACTCAGGTTTTGCCATTTCT...TTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp ATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAGTCTAGCTTTTCATACTTCACGTTACTaGAACTCCTGTGTAGGTCGT +
Preference number: 4 (lower is better)
Translates to: MAANDHKRCRRHEESLAFHTSRY*NSCVGR
Trigger: ACGACCTACACAGGAGTTTCAGTAACGTGAAGTATG...AAAAGCTAGACTCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp CCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATGTAATTGTTTGGCATaGTTTTCCCGGTTTCCCAGT +
Preference number: 4 (lower is better)
Translates to: PASITMIREKEIIPLKHKCNCLA*FSRFPS
Trigger: ACTGGGAAACCGGGAAAATCATGCCAAACAATTACA...TTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp AAGAGCACTAATGACGGGGAGGATGGAGACAATGTTTGGATTTACTTAGGAAGCCATGATGAACTGATGTaGGCTCCATACCCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: KSTNDGEDGDNVWIYLGSHDELM*APYPEV
Trigger: AACCTCAGGGTATGGAGCTCACATCAGTTCATCATG...GCTTCCTAAGTAAATCCAAACATTGTCTCCATCCTCCCCGTCATTAGTGCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp CCAGGCTCGTATAGTTGCTGCAGATGGTCCTTACTTTTTCAATTGCCTCCACAACCGGCCCAATCACAATaGTTTCTAAAACATGTCTCC +
Preference number: 4 (lower is better)
Translates to: PGSYSCCRWSLLFQLPPQPAQSQ*FLKHVS
Trigger: GGAGACATGTTTTAGAAATCATTGTGATTGGGCCGG...TTGTGGAGGCAATTGAAAAAGTAAGGACCATCTGCAGCAACTATACGAGCCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR GCA 90 bp AAGAGCACTAATGACGGGGAGGATGGAGACAATGTTTGGATTTACTTAGGAAGCGGAGAGTCTAGCTTTTaGCGGGCTGATTTGAAAGGA +
Preference number: 4 (lower is better)
Translates to: KSTNDGEDGDNVWIYLGSGESSF*RADLKG
Trigger: TCCTTTCAAATCAGCCCGGCAAAAGCTAGACTCTCC...GCTTCCTAAGTAAATCCAAACATTGTCTCCATCCTCCCCGTCATTAGTGCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp TCCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAGCTCGTACATTTGCTTaGGAGTCATTAACTGGAACA +
Preference number: 4 (lower is better)
Translates to: SSIHHNDPREGDYPPEAQARTFA*ESLTGT
Trigger: TGTTCCAGTTAATGACTCCCAAGCAAATGTACGAGC...TTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp ATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAGTCTAGCTTTTGTTTCACTGAAGGCGTaGGCCAGAAGAAAAACATCA +
Preference number: 4 (lower is better)
Translates to: MAANDHKRCRRHEESLAFVSLKA*ARRKTS
Trigger: TGATGTTTTTCTTCTGGCCCACGCCTTCAGTGAAAC...AAAAGCTAGACTCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp AAGAGCACTAATGACGGGGAGGATGGAGACAATGTTTGGATTTACTTAGGAAGCCGCTGTTTAGTCAACTaGCTGATGTCGATGGGCTTA +
Preference number: 4 (lower is better)
Translates to: KSTNDGEDGDNVWIYLGSRCLVN*LMSMGL
Trigger: TAAGCCCATCGACATCAGCCAGTTGACTAAACAGCG...GCTTCCTAAGTAAATCCAAACATTGTCTCCATCCTCCCCGTCATTAGTGCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp CCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATCAAAACATCATTTCTaGGAGACTGTGGGCCAAGAA +
Preference number: 4 (lower is better)
Translates to: PASITMIREKEIIPLKHKSKHHF*ETVGQE
Trigger: TTCTTGGCCCACAGTCTCCCAGAAATGATGTTTTGA...TTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp TCCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAGTCTGTATCATGAGTTaGGGATTAAACATAGCCTCT +
Preference number: 4 (lower is better)
Translates to: SSIHHNDPREGDYPPEAQVCIMS*GLNIAS
Trigger: AGAGGCTATGTTTAATCCTCAACTCATGATACAGAC...TTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp CCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAAGAATTGCAGGAAAAATaGGCAGAACCATGGCAAAAT +
Preference number: 4 (lower is better)
Translates to: PASITMIREKEIIPLKHKELQEK*AEPWQN
Trigger: ATTTTGCCATGGTTCTGCTCATTTTTCCTGCAATTC...TTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp ACAGCGATTCCACTTCACCATTCACTCTATGCAAAAACTACAATAAGCAAGCTTCCCACCATGATGAACTaGTGTGAGCTCCATACCCTG +
Preference number: 4 (lower is better)
Translates to: TAIPLHHSLYAKTTISKLPTMMN*CELHTL
Trigger: CAGGGTATGGAGCTCACATCAGTTCATCATGGTGGG...AAGCTTGCTTATTGTAGTTTTTGCATAGAGTGAATGGTGAAGTGGAATCGCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR GCA 90 bp ATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAGTCTAGCTTTTAACTCCTCCTGCCAGTaGATATACTTTCTGGATAAG +
Preference number: 4 (lower is better)
Translates to: MAANDHKRCRRHEESLAFNSSCQ*IYFLDK
Trigger: CTTATCCAGAAAGTATATGCACTGGCAGGAGGAGTT...AAAAGCTAGACTCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp TCCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAACAAAACCTGAGTTGTTaGAGCGTTAAAGGAAATTCC +
Preference number: 4 (lower is better)
Translates to: SSIHHNDPREGDYPPEAQQNLSC*SVKGNS
Trigger: GGAATTTCCTTTAACGCTGCAACAACTCAGGTTTTG...TTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp CCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAAGATATTCGGGTAGTCTaGTTTCTGGGTGACTATATA +
Preference number: 4 (lower is better)
Translates to: PASITMIREKEIIPLKHKDIRVV*FLGDYI
Trigger: TATATAGTCACCCAGAAAGCAGACTACCCGAATATC...TTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp ATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAGTCTAGCTTTTGGCTCGTATAGTTGCTaGAGATGGTCCTTACTTTTT +
Preference number: 4 (lower is better)
Translates to: MAANDHKRCRRHEESLAFGSYSC*RWSLLF
Trigger: AAAAAGTAAGGACCATCTGCAGCAACTATACGAGCC...AAAAGCTAGACTCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp CCAGGCTCGTATAGTTGCTGCAGATGGTCCTTACTTTTTCAATTGCCTCCACAATTGCTAGGGCCAGAATaGCCTTCAGTAGAAATTTCA +
Preference number: 4 (lower is better)
Translates to: PGSYSCCRWSLLFQLPPQLLGPE*PSVEIS
Trigger: TGAAATTTCTACTGAAGGGCATTCTGGCCCTAGCAA...TTGTGGAGGCAATTGAAAAAGTAAGGACCATCTGCAGCAACTATACGAGCCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR GCA 90 bp ATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAGTCTAGCTTTTAATGATCATAAGAGATaGCGTAGACACGAGGAGAGT +
Preference number: 4 (lower is better)
Translates to: MAANDHKRCRRHEESLAFNDHKR*RRHEES
Trigger: ACTCTCCTCGTGTCTACGGCATCTCTTATGATCATT...AAAAGCTAGACTCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp CCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAACATGAATATCCACTCTaGTCTGACTCTCTTAACACT +
Preference number: 4 (lower is better)
Translates to: PASITMIREKEIIPLKHKHEYPL*SDSLNT
Trigger: AGTGTTAAGAGAGTCAGAGCAGAGTGGATATTCATG...TTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000430669.6
CDS-3UTR GCA 90 bp CCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAAACAGGCAACCAGTGCTaGCATGTCTATATATGTTTT +
Preference number: 4 (lower is better)
Translates to: PASITMIREKEIIPLKHKTGNQC*HVYICF
Trigger: AAAACATATATAGACATGGCAGCACTGGTTGCCTGT...TTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CCA 90 bp AAGAGCACTAATGACGGGGAGGATGGAGACAATGTTTGGATTTACTTAGGAAGCACCAAGAGCGAGAAATaGCAAAACCTGAGTTGTTGC +
Preference number: 4 (lower is better)
Translates to: KSTNDGEDGDNVWIYLGSTKSEK*QNLSCC
Trigger: GCAACAACTCAGGTTTTGCCATTTCTCGCTCTTGGT...GCTTCCTAAGTAAATCCAAACATTGTCTCCATCCTCCCCGTCATTAGTGCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp CCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAAAGTGCAGCCACATTTTaGGAAGCTGTTTGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: PASITMIREKEIIPLKHKSAATF*EAVCFL
Trigger: AAGAAAACAAACAGCTTCCCAAAATGTGGCTGCACT...TTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp ATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAGTCTAGCTTTTTCAAAACATCATTTCTaGGAGACTGTGGGCCAAGAA +
Preference number: 4 (lower is better)
Translates to: MAANDHKRCRRHEESLAFSKHHF*ETVGQE
Trigger: TTCTTGGCCCACAGTCTCCCAGAAATGATGTTTTGA...AAAAGCTAGACTCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp AGGATGGTGAGGATCGCCAGCACAGCAAAGAAATACCTGGGAGATCAAGAGGAATGCAAATGGCACTTATaGGGTGCTTGTTATATTTGT +
Preference number: 4 (lower is better)
Translates to: RMVRIASTAKKYLGDQEECKWHL*GACYIC
Trigger: ACAAATATAACAAGCACCCCATAAGTGCCATTTGCA...TTCCTCTTGATCTCCCAGGTATTTCTTTGCTGTGCTGGCGATCCTCACCATCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR TCA 90 bp AAGAGCACTAATGACGGGGAGGATGGAGACAATGTTTGGATTTACTTAGGAAGCTTAAATAAGAGTCTCTaGAACTTCGCTCTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: KSTNDGEDGDNVWIYLGSLNKSL*NFALSH
Trigger: GTGGCTGAGAGCGAAGTTTCAGAGACTCTTATTTAA...GCTTCCTAAGTAAATCCAAACATTGTCTCCATCCTCCCCGTCATTAGTGCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp ATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAGTCTAGCTTTTGTCTGTATCATGAGTTaGGGATTAAACATAGCCTCT +
Preference number: 4 (lower is better)
Translates to: MAANDHKRCRRHEESLAFVCIMS*GLNIAS
Trigger: AGAGGCTATGTTTAATCCTCAACTCATGATACAGAC...AAAAGCTAGACTCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp ATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAGTCTAGCTTTTAGTCTGCTTTCTGGGTaGCTATATACATGTTGTAGA +
Preference number: 4 (lower is better)
Translates to: MAANDHKRCRRHEESLAFSLLSG*LYTCCR
Trigger: TCTACAACATGTATATAGTCACCCAGAAAGCAGACT...AAAAGCTAGACTCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp AAGAGCACTAATGACGGGGAGGATGGAGACAATGTTTGGATTTACTTAGGAAGCAAGTGCTCGTACATTTaGTTGGGAGTCATTAACTGG +
Preference number: 4 (lower is better)
Translates to: KSTNDGEDGDNVWIYLGSKCSYI*LGVINW
Trigger: CCAGTTAATGACTCCCAAGCAAATGTACGAGCACTT...GCTTCCTAAGTAAATCCAAACATTGTCTCCATCCTCCCCGTCATTAGTGCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp AAGAGCACTAATGACGGGGAGGATGGAGACAATGTTTGGATTTACTTAGGAAGCGGCTCGTATAGTTGCTaGAGATGGTCCTTACTTTTT +
Preference number: 4 (lower is better)
Translates to: KSTNDGEDGDNVWIYLGSGSYSC*RWSLLF
Trigger: AAAAAGTAAGGACCATCTGCAGCAACTATACGAGCC...GCTTCCTAAGTAAATCCAAACATTGTCTCCATCCTCCCCGTCATTAGTGCTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp AAGAGCACTAATGACGGGGAGGATGGAGACAATGTTTGGATTTACTTAGGAAGCTTGCTAGGGCCAGAATaGCCTTCAGTAGAAATTTCA +
Preference number: 4 (lower is better)
Translates to: KSTNDGEDGDNVWIYLGSLLGPE*PSVEIS
Trigger: TGAAATTTCTACTGAAGGGCATTCTGGCCCTAGCAA...GCTTCCTAAGTAAATCCAAACATTGTCTCCATCCTCCCCGTCATTAGTGCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp ATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAGTCTAGCTTTTCATGAATATCCACTCTaGTCTGACTCTCTTAACACT +
Preference number: 4 (lower is better)
Translates to: MAANDHKRCRRHEESLAFHEYPL*SDSLNT
Trigger: AGTGTTAAGAGAGTCAGAGCAGAGTGGATATTCATG...AAAAGCTAGACTCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000430669.6
CDS-3UTR GCA 90 bp ACAGCGATTCCACTTCACCATTCACTCTATGCAAAAACTACAATAAGCAAGCTTAAAGCAGCCCACTTCTaGAGGCTGCTAATCCACTGT +
Preference number: 4 (lower is better)
Translates to: TAIPLHHSLYAKTTISKLKAAHF*RLLIHC
Trigger: ACAGTGGATTAGCAGCCTGCAGAAGTGGGCTGCTTT...AAGCTTGCTTATTGTAGTTTTTGCATAGAGTGAATGGTGAAGTGGAATCGCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CCA 90 bp ATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAGTCTAGCTTTTATTTCTGGGAGACTGTaGGCCAAGAAAGAATTAACT +
Preference number: 4 (lower is better)
Translates to: MAANDHKRCRRHEESLAFISGRL*AKKELT
Trigger: AGTTAATTCTTTCTTGGCCCACAGTCTCCCAGAAAT...AAAAGCTAGACTCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
3UTR CAA 72 bp AGAATTGCAGGAAAAATGAGCAGAACCATGGCAAAATaGAACACCACTACTACCGCTGCCTTGGGAGAATTT +
Preference number: 4 (lower is better)
Translates to: RIAGKMSRTMAK*NTTTTAALGEF
Trigger: AAATTCTCCCAAGGCAGCGGTAGTAGTGGTGTTCAATTTTGCCATGGTTCTGCTCATTTTTCCTGCAATTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR TCA 90 bp AAGAGCACTAATGACGGGGAGGATGGAGACAATGTTTGGATTTACTTAGGAAGCGTCTGTATCATGAGTTaGGGATTAAACATAGCCTCT +
Preference number: 4 (lower is better)
Translates to: KSTNDGEDGDNVWIYLGSVCIMS*GLNIAS
Trigger: AGAGGCTATGTTTAATCCTCAACTCATGATACAGAC...GCTTCCTAAGTAAATCCAAACATTGTCTCCATCCTCCCCGTCATTAGTGCTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp AAGAGCACTAATGACGGGGAGGATGGAGACAATGTTTGGATTTACTTAGGAAGCGAATTGCAGGAAAAATaGGCAGAACCATGGCAAAAT +
Preference number: 4 (lower is better)
Translates to: KSTNDGEDGDNVWIYLGSELQEK*AEPWQN
Trigger: ATTTTGCCATGGTTCTGCTCATTTTTCCTGCAATTC...GCTTCCTAAGTAAATCCAAACATTGTCTCCATCCTCCCCGTCATTAGTGCTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR GCA 90 bp AAGAGCACTAATGACGGGGAGGATGGAGACAATGTTTGGATTTACTTAGGAAGCCATGAATATCCACTCTaGTCTGACTCTCTTAACACT +
Preference number: 4 (lower is better)
Translates to: KSTNDGEDGDNVWIYLGSHEYPL*SDSLNT
Trigger: AGTGTTAAGAGAGTCAGAGCAGAGTGGATATTCATG...GCTTCCTAAGTAAATCCAAACATTGTCTCCATCCTCCCCGTCATTAGTGCTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000430669.6
CDS-3UTR CCA 90 bp AAGAGCACTAATGACGGGGAGGATGGAGACAATGTTTGGATTTACTTAGGAAGCAGTGCATATACTTTCTaGATAAGCCATGACATCCAC +
Preference number: 4 (lower is better)
Translates to: KSTNDGEDGDNVWIYLGSSAYTF*ISHDIH
Trigger: GTGGATGTCATGGCTTATCCAGAAAGTATATGCACT...GCTTCCTAAGTAAATCCAAACATTGTCTCCATCCTCCCCGTCATTAGTGCTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CCA 90 bp AAGAGCACTAATGACGGGGAGGATGGAGACAATGTTTGGATTTACTTAGGAAGCGAGAATTTAGCGCACTaGATTTTCTACAAGGCTACT +
Preference number: 4 (lower is better)
Translates to: KSTNDGEDGDNVWIYLGSENLAH*IFYKAT
Trigger: AGTAGCCTTGTAGAAAATCCAGTGCGCTAAATTCTC...GCTTCCTAAGTAAATCCAAACATTGTCTCCATCCTCCCCGTCATTAGTGCTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CCA 90 bp ACAGCGATTCCACTTCACCATTCACTCTATGCAAAAACTACAATAAGCAAGCTTCTACACAGAGGGATATaGGGGTCCCCATTATTTGCT +
Preference number: 4 (lower is better)
Translates to: TAIPLHHSLYAKTTISKLLHRGI*GSPLFA
Trigger: AGCAAATAATGGGGACCCCCATATCCCTCTGTGTAG...AAGCTTGCTTATTGTAGTTTTTGCATAGAGTGAATGGTGAAGTGGAATCGCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CCA 90 bp AAAGACTGGCAAATATTGGTAAAAGGTGGTGCTGTTTGTGTCCTTGTGGCGCTGAATATTGGTAAAAGGTaGTGCTGTTTGTGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: KDWQILVKGGAVCVLVALNIGKR*CCLCPC
Trigger: ACAAGGACACAAACAGCACCACCTTTTACCAATATT...CAGCGCCACAAGGACACAAACAGCACCACCTTTTACCAATATTTGCCAGTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430669.6
3UTR CAA 72 bp GCCTTGAGATCCAAACTAGGCTTAGATTCCCAAGAGTaGACACCAAAGTCCAATGCTAAATGCTTCCTAATT +
Preference number: 4 (lower is better)
Translates to: ALRSKLGLDSQE*TPKSNAKCFLI
Trigger: AATTAGGAAGCATTTAGCATTGGACTTTGGTGTCAACTCTTGGGAATCTAAGCCTAGTTTGGATCTCAAGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
3UTR CAA 72 bp GAACAGGCAACCAGTGCTGCCATGTCTATATATGTTTaGACATCAGATGAAAGGAGAGAGAATCCCCATAAA +
Preference number: 4 (lower is better)
Translates to: EQATSAAMSIYV*TSDERRENPHK
Trigger: TTTATGGGGATTCTCTCTCCTTTCATCTGATGTCAAAACATATATAGACATGGCAGCACTGGTTGCCTGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR TCA 90 bp ACAGCGATTCCACTTCACCATTCACTCTATGCAAAAACTACAATAAGCAAGCTTGCTGCTAATCCACTGTaGAATGCTTCTGCATCTTAC +
Preference number: 4 (lower is better)
Translates to: TAIPLHHSLYAKTTISKLAANPL*NASASY
Trigger: GTAAGATGCAGAAGCATTTCACAGTGGATTAGCAGC...AAGCTTGCTTATTGTAGTTTTTGCATAGAGTGAATGGTGAAGTGGAATCGCTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CCA 90 bp ATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAGTCTAGCTTTTTATAGTTGCTGCAGATaGTCCTTACTTTTTCAATTG +
Preference number: 4 (lower is better)
Translates to: MAANDHKRCRRHEESLAFYSCCR*SLLFQL
Trigger: CAATTGAAAAAGTAAGGACCATCTGCAGCAACTATA...AAAAGCTAGACTCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR TCA 90 bp ACAGCGATTCCACTTCACCATTCACTCTATGCAAAAACTACAATAAGCAAGCTTTATTTTGAGTGGAGATaGGTTTCACCATCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: TAIPLHHSLYAKTTISKLYFEWR*VSPSWP
Trigger: TGGCCAAGATGGTGAAACTCATCTCCACTCAAAATA...AAGCTTGCTTATTGTAGTTTTTGCATAGAGTGAATGGTGAAGTGGAATCGCTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR GCA 90 bp ACAGCGATTCCACTTCACCATTCACTCTATGCAAAAACTACAATAAGCAAGCTTGGCTCGTATAGTTGCTaGAGATGGTCCTTACTTTTT +
Preference number: 4 (lower is better)
Translates to: TAIPLHHSLYAKTTISKLGSYSC*RWSLLF
Trigger: AAAAAGTAAGGACCATCTGCAGCAACTATACGAGCC...AAGCTTGCTTATTGTAGTTTTTGCATAGAGTGAATGGTGAAGTGGAATCGCTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR GCA 90 bp CAGGACATTAGCACCTTCTTCTTTAGGGGTCTGTATCATGAGTTGAGGATTAAATGTTCCAATTTCCACTaGCTGTTGTACATGTATACA +
Preference number: 4 (lower is better)
Translates to: QDISTFFFRGLYHELRIKCSNFH*LLYMYT
Trigger: TGTATACATGTACAACAGGCAGTGGAAATTGGAACA...TTTAATCCTCAACTCATGATACAGACCCCTAAAGAAGAAGGTGCTAATGTCCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551623.1
CDS-3UTR CCA 90 bp ACAGCGATTCCACTTCACCATTCACTCTATGCAAAAACTACAATAAGCAAGCTTATTTCTGGGAGACTGTaGGCCAAGAAAGAATTAACT +
Preference number: 4 (lower is better)
Translates to: TAIPLHHSLYAKTTISKLISGRL*AKKELT
Trigger: AGTTAATTCTTTCTTGGCCCACAGTCTCCCAGAAAT...AAGCTTGCTTATTGTAGTTTTTGCATAGAGTGAATGGTGAAGTGGAATCGCTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS CCA 90 bp GGCAGCCGCAGCTGCCGCTGCTCCCGCGGTGGCTGCTGCTGGCGGTaGCGGCTCCAGGAGCTGCTGCTCGGGCTGCTCGGGCTCTGGCTG +
Preference number: 5 (lower is better)
Translates to: GSRSCRCSRGGCCWR*RLQELLLGLLGLWL
Trigger: CAGCCAGAGCCCGAGCAGCCCGAGCAGCAGCTCCTGGAGCCGCCACCGCCAGCAGCAGCCACCGCGGGAGCAGCGGCAGCTGCGGCTGCC
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331920.11
CDS GCA 90 bp GCTCCCGCGGTGGCTGCTGCTGGCGGTGGCGGCTCCAGGAGCTGCTaGTCGGGCTGCTCGGGCTCTGGCTGCTGGGTTCGCGGTGGCTGC +
Preference number: 5 (lower is better)
Translates to: APAVAAAGGGGSRSC*SGCSGSGCWVRGGC
Trigger: GCAGCCACCGCGAACCCAGCAGCCAGAGCCCGAGCAGCCCGAGCAGCAGCTCCTGGAGCCGCCACCGCCAGCAGCAGCCACCGCGGGAGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331920.11
CDS CCA 90 bp TCCCCTTGGAAATCTGCTCCAGAGCGAAGGCGGCGTCGCAGTAGCTaGGCCGGTGCAGATAGTCCCGGTCCGGCGCGGCAGCACGGCGCA +
Preference number: 5 (lower is better)
Translates to: SPWKSAPERRRRRSS*AGADSPGPARQHGA
Trigger: TGCGCCGTGCTGCCGCGCCGGACCGGGACTATCTGCACCGGCCCAGCTACTGCGACGCCGCCTTCGCTCTGGAGCAGATTTCCAAGGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331920.11
CDS-3UTR CAA 90 bp CTCCGAGTCGGAGGAATCAGACCCGCTGTGCGTGTGGCCGGGCGGCATGGCGAAGGCTTCCACGATCACTaGGTGGGCAGGGCCTCCCGC +
Preference number: 5 (lower is better)
Translates to: LRVGGIRPAVRVAGRHGEGFHDH*VGRASR
Trigger: GCGGGAGGCCCTGCCCACCAAGTGATCGTGGAAGCC...TTCGCCATGCCGCCCGGCCACACGCACAGCGGGTCTGATTCCTCCGACTCGGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS GCA 90 bp GCTTTCTTGTGCTCCTCGGCAACCCGCTGGACCATTCTGTCCCCGTaGAGCGCGCCTCTCTCGCTCCCGGGACCTGGGGACTCCGCTCTG +
Preference number: 5 (lower is better)
Translates to: AFLCSSATRWTILSP*SAPLSLPGPGDSAL
Trigger: CAGAGCGGAGTCCCCAGGTCCCGGGAGCGAGAGAGGCGCGCTGCACGGGGACAGAATGGTCCAGCGGGTTGCCGAGGAGCACAAGAAAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331920.11
CDS GCA 90 bp TGCTGGGTTCGCGGTGGCTGCTCGGTCCCGGACTCTGCTTTCTTGTaGTCCTCGGCAACCCGCTGGACCATTCTGTCCCCGTGCAGCGCG +
Preference number: 5 (lower is better)
Translates to: CWVRGGCSVPDSAFL*SSATRWTILSPCSA
Trigger: CGCGCTGCACGGGGACAGAATGGTCCAGCGGGTTGCCGAGGAGCACAAGAAAGCAGAGTCCGGGACCGAGCAGCCACCGCGAACCCAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331920.11
CDS GCA 90 bp GGGCTCTGGCTGCTGGGTTCGCGGTGGCTGCTCGGTCCCGGACTCTaGTTTCTTGTGCTCCTCGGCAACCCGCTGGACCATTCTGTCCCC +
Preference number: 5 (lower is better)
Translates to: GLWLLGSRWLLGPGL*FLVLLGNPLDHSVP
Trigger: GGGGACAGAATGGTCCAGCGGGTTGCCGAGGAGCACAAGAAAGCAGAGTCCGGGACCGAGCAGCCACCGCGAACCCAGCAGCCAGAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331920.11
CDS CCA 90 bp TGCTCGGTCCCGGACTCTGCTTTCTTGTGCTCCTCGGCAACCCGCTaGACCATTCTGTCCCCGTGCAGCGCGCCTCTCTCGCTCCCGGGA +
Preference number: 5 (lower is better)
Translates to: CSVPDSAFLCSSATR*TILSPCSAPLSLPG
Trigger: TCCCGGGAGCGAGAGAGGCGCGCTGCACGGGGACAGAATGGTCCAGCGGGTTGCCGAGGAGCACAAGAAAGCAGAGTCCGGGACCGAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331920.11
CDS-3UTR CAA 90 bp GGCTCAGGGGAGGGTGTGGGCAGGCGGTTCAAGCCGTTGGCTGGAGACACCTCATACGCGACGGGGTCGTaGCTGACCCAAGCCGTCAGG +
Preference number: 5 (lower is better)
Translates to: GSGEGVGRRFKPLAGDTSYATGS*LTQAVR
Trigger: CCTGACGGCTTGGGTCAGCAACGACCCCGTCGCGTA...TGAGGTGTCTCCAGCCAACGGCTTGAACCGCCTGCCCACACCCTCCCCTGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CAA 90 bp TCCTTGTGGCGCTGCACCGACCCTCCGCAGGTTAGCAGTGGGGGAAGAGAGCAGGGCTTCCACGATCACTaGGTGGGCAGGGCCTCCCGC +
Preference number: 5 (lower is better)
Translates to: SLWRCTDPPQVSSGGREQGFHDH*VGRASR
Trigger: GCGGGAGGCCCTGCCCACCAAGTGATCGTGGAAGCC...CTGCTCTCTTCCCCCACTGCTAACCTGCGGAGGGTCGGTGCAGCGCCACAAGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430669.6
CDS GCA 90 bp GCGCCTCTCTCGCTCCCGGGACCTGGGGACTCCGCTCTGTGTGTGTaGAGCGGGCAGCGGCCGCAGCAGCTCCTTGATTCAATAGATGAG +
Preference number: 5 (lower is better)
Translates to: APLSLPGPGDSALCV*SGQRPQQLLDSIDE
Trigger: CTCATCTATTGAATCAAGGAGCTGCTGCGGCCGCTGCCCGCTGCACACACACAGAGCGGAGTCCCCAGGTCCCGGGAGCGAGAGAGGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331920.11
CDS GCA 90 bp AGATGCAATCAGGTCAGCCCGGCACTCTGCCCACGCTGGACCTGCTaGCTGTCGCAGCTCCCACCAGCTCCCAAGGAGCCACGAGTTCCC +
Preference number: 5 (lower is better)
Translates to: RCNQVSPALCPRWTC*LSQLPPAPKEPRVP
Trigger: GGGAACTCGTGGCTCCTTGGGAGCTGGTGGGAGCTGCGACAGGCAGCAGGTCCAGCGTGGGCAGAGTGCCGGGCTGACCTGATTGCATCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553256.5
CDS GCA 90 bp ATCCCAGCGATGGAGCCCAAGGTTCAGGAGCCAGCAAACCAGTCCTaGTCTGTCCATCACCCTCGGGGACGGGCGCTAGGGGCGAGCGCT +
Preference number: 5 (lower is better)
Translates to: IPAMEPKVQEPANQS*SVHHPRGRALGASA
Trigger: AGCGCTCGCCCCTAGCGCCCGTCCCCGAGGGTGATGGACAGAGCAGGACTGGTTTGCTGGCTCCTGAACCTTGGGCTCCATCGCTGGGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553011.5
CDS GCA 90 bp GTCAGATGCAATCAGGTCAGCCCGGCACTCTGCCCACGCTGGACCTaGTGCCTGTCGCAGCTCCCACCAGCTCCCAAGGAGCCACGAGTT +
Preference number: 5 (lower is better)
Translates to: VRCNQVSPALCPRWT*CLSQLPPAPKEPRV
Trigger: AACTCGTGGCTCCTTGGGAGCTGGTGGGAGCTGCGACAGGCAGCAGGTCCAGCGTGGGCAGAGTGCCGGGCTGACCTGATTGCATCTGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553256.5
CDS-3UTR CAA 90 bp ACACACGCACGCACGCACACACACACACACACACCCAGCAGCCACAAGCGGCTCCCTTCCATTGCCACATaGCGCGGGGGTCCCGAGGTC +
Preference number: 5 (lower is better)
Translates to: THARTHTHTHTPSSHKRLPSIAT*RGGPEV
Trigger: GACCTCGGGACCCCCGCGCAATGTGGCAATGGAAGG...GAGCCGCTTGTGGCTGCTGGGTGTGTGTGTGTGTGTGTGCGTGCGTGCGTGTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331920.11
CDS-3UTR CAA 90 bp ACACACGCACGCACGCACACACACACACACACACCCAGCAGCCACAAGCGGCTCTCTGGATCGGCCGGATaGAGGCAGGGGCGGTCCATG +
Preference number: 5 (lower is better)
Translates to: THARTHTHTHTPSSHKRLSGSAG*RQGRSM
Trigger: CATGGACCGCCCCTGCCTCAATCCGGCCGATCCAGA...GAGCCGCTTGTGGCTGCTGGGTGTGTGTGTGTGTGTGTGCGTGCGTGCGTGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CAA 90 bp TCCTTGTGGCGCTGCACCGACCCTCCGCAGGTTAGCAGTGGGGGAAGAGAGCAGGGGAGAGCAGGTCCCTaGTGGAGCTGGTGCTCTCTG +
Preference number: 5 (lower is better)
Translates to: SLWRCTDPPQVSSGGREQGRAGP*WSWCSL
Trigger: CAGAGAGCACCAGCTCCACAAGGGACCTGCTCTCCC...CTGCTCTCTTCCCCCACTGCTAACCTGCGGAGGGTCGGTGCAGCGCCACAAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430669.6
CDS-3UTR CAA 90 bp TCCTTGTGGCGCTGCACCGACCCTCCGCAGGTTAGCAGTGGGGGAAGAGAGCAGACAGCCCTGCGGTTCTaGTCGCCGATGGCCGTCAGA +
Preference number: 5 (lower is better)
Translates to: SLWRCTDPPQVSSGGREQTALRF*SPMAVR
Trigger: TCTGACGGCCATCGGCGACAAGAACCGCAGGGCTGT...CTGCTCTCTTCCCCCACTGCTAACCTGCGGAGGGTCGGTGCAGCGCCACAAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430669.6
CDS-3UTR CAA 90 bp CTCCGAGTCGGAGGAATCAGACCCGCTGTGCGTGTGGCCGGGCGGCATGGCGAAGGTTTGGTTGAATTTTaGTTGGGGGCTGTGGCGGGG +
Preference number: 5 (lower is better)
Translates to: LRVGGIRPAVRVAGRHGEGLVEF*LGAVAG
Trigger: CCCCGCCACAGCCCCCAACAAAAATTCAACCAAACC...TTCGCCATGCCGCCCGGCCACACGCACAGCGGGTCTGATTCCTCCGACTCGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CAA 90 bp ACACACGCACGCACGCACACACACACACACACACCCAGCAGCCACAAGCGGCTCCTGGCTCTAGGTCCCTaGGCTGCCCTTGTCAGTGGC +
Preference number: 5 (lower is better)
Translates to: THARTHTHTHTPSSHKRLLALGP*AALVSG
Trigger: GCCACTGACAAGGGCAGCCAAGGGACCTAGAGCCAG...GAGCCGCTTGTGGCTGCTGGGTGTGTGTGTGTGTGTGTGCGTGCGTGCGTGTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430669.6
CDS-3UTR CAA 90 bp ACACACGCACGCACGCACACACACACACACACACCCAGCAGCCACAAGCGGCTCATCGCGGCTGCCGGTTaGCACCAGGAGTTTGTAGGC +
Preference number: 5 (lower is better)
Translates to: THARTHTHTHTPSSHKRLIAAAG*HQEFVG
Trigger: GCCTACAAACTCCTGGTGCAAACCGGCAGCCGCGAT...GAGCCGCTTGTGGCTGCTGGGTGTGTGTGTGTGTGTGTGCGTGCGTGCGTGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CAA 90 bp GAAGGCGGCCTCCATGATGCCAAATTGCCCAGTGGGCTATGCCACAGGCCAACCACAGCCCTGCGGTTCTaGTCGCCGATGGCCGTCAGA +
Preference number: 5 (lower is better)
Translates to: EGGLHDAKLPSGLCHRPTTALRF*SPMAVR
Trigger: TCTGACGGCCATCGGCGACAAGAACCGCAGGGCTGT...GGTTGGCCTGTGGCATAGCCCACTGGGCAATTTGGCATCATGGAGGCCGCCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS CCA 90 bp GAAAGCAAAGTAAACTCGAGGAACGTGCTATCAGCACAGCCCTCCTaGGTAAACAGGCGCTCCCCTCCCCGCCTTCCTGGGAGGCGCCCT +
Preference number: 5 (lower is better)
Translates to: ESKVNSRNVLSAQPS*VNRRSPPRLPGRRP
Trigger: AGGGCGCCTCCCAGGAAGGCGGGGAGGGGAGCGCCTGTTTACCCAGGAGGGCTGTGCTGATAGCACGTTCCTCGAGTTTACTTTGCTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430669.6
ENST00000468211.6
CDS-3UTR CAA 90 bp ACTCTGCATGGCTGGAGGGCACAGACTCCACGCAGGGATGCGTTTCTGGAACTACGGTGTGGCCGGATGTaGGCCTGGGAGGCAGCATAC +
Preference number: 5 (lower is better)
Translates to: TLHGWRAQTPRRDAFLELRCGRM*AWEAAY
Trigger: GTATGCTGCCTCCCAGGCCAACATCCGGCCACACCG...TAGTTCCAGAAACGCATCCCTGCGTGGAGTCTGTGCCCTCCAGCCATGCAGAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CAA 90 bp ATGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACGGCTTCCACGATCACTaGGTGGGCAGGGCCTCCCGC +
Preference number: 5 (lower is better)
Translates to: MAQPRLSTRHVTEFSNTHGFHDH*VGRASR
Trigger: GCGGGAGGCCCTGCCCACCAAGTGATCGTGGAAGCC...GTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CAA 90 bp TGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCCCCCAGCGGGCCCTATaGCTAGGGCCAGAATGCCCT +
Preference number: 5 (lower is better)
Translates to: WPSQGSALGMSPNSLTPTPQRAL*LGPECP
Trigger: AGGGCATTCTGGCCCTAGCAATAGGGCCCGCTGGGG...GGTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCA
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS GCA 90 bp AGGAGAACCTTGTCCTCCTCTTTGCCTGGCTCTAGGTCCCTTGGCTaGCCTTGTCAGTGGCACTCACCTCAGTTGGAGCTGCTTCCCCGG +
Preference number: 5 (lower is better)
Translates to: RRTLSSSLPGSRSLG*PCQWHSPQLELLPR
Trigger: CCGGGGAAGCAGCTCCAACTGAGGTGAGTGCCACTGACAAGGGCAGCCAAGGGACCTAGAGCCAGGCAAAGAGGAGGACAAGGTTCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430669.6
CDS-3UTR CAA 90 bp TGGGGTCCTGGATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGACTTCCGCGGCACTCCTaGCGGTCCCCAACTCCCCCT +
Preference number: 5 (lower is better)
Translates to: WGPGWQPMIIRDAVDTRRLPRHS*RSPTPP
Trigger: AGGGGGAGTTGGGGACCGCAAGGAGTGCCGCGGAAG...TCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCATCCAGGACCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000331920.11
CDS-3UTR CAA 90 bp ATGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACTCTGGATCGGCCGGATaGAGGCAGGGGCGGTCCATG +
Preference number: 5 (lower is better)
Translates to: MAQPRLSTRHVTEFSNTHSGSAG*RQGRSM
Trigger: CATGGACCGCCCCTGCCTCAATCCGGCCGATCCAGA...GTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CAA 90 bp ACACACGCACGCACGCACACACACACACACACACCCAGCAGCCACAAGCGGCTCAAGAAGGCTGTGACATaGCTGATGGACGTGAGGGCC +
Preference number: 5 (lower is better)
Translates to: THARTHTHTHTPSSHKRLKKAVT*LMDVRA
Trigger: GGCCCTCACGTCCATCAGCAATGTCACAGCCTTCTT...GAGCCGCTTGTGGCTGCTGGGTGTGTGTGTGTGTGTGTGCGTGCGTGCGTGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CAA 90 bp TGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCGGGAGAGCAGGTCCCTaGTGGAGCTGGTGCTCTCTG +
Preference number: 5 (lower is better)
Translates to: WPSQGSALGMSPNSLTPTGRAGP*WSWCSL
Trigger: CAGAGAGCACCAGCTCCACAAGGGACCTGCTCTCCC...GGTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CAA 90 bp ACACGCACAGCCAAACAAGAGGACCGCACACAACGACACCTAGAGAAGCCACCATACGCGACGGGGTCGTaGCTGACCCAAGCCGTCAGG +
Preference number: 5 (lower is better)
Translates to: TRTAKQEDRTQRHLEKPPYATGS*LTQAVR
Trigger: CCTGACGGCTTGGGTCAGCAACGACCCCGTCGCGTA...TGGTGGCTTCTCTAGGTGTCGTTGTGTGCGGTCCTCTTGTTTGGCTGTGCGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CAA 90 bp ACACACGCACGCACGCACACACACACACACACACCCAGCAGCCACAAGCGGCTCAGCAAAACCAGCCCATaGAGAACGCCGAGGATGGTG +
Preference number: 5 (lower is better)
Translates to: THARTHTHTHTPSSHKRLSKTSP*RTPRMV
Trigger: CACCATCCTCGGCGTTCTCAATGGGCTGGTTTTGCT...GAGCCGCTTGTGGCTGCTGGGTGTGTGTGTGTGTGTGTGCGTGCGTGCGTGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CAA 90 bp ACACGCACAGCCAAACAAGAGGACCGCACACAACGACACCTAGAGAAGCCACCATCCCTCGTCTCCCCCTaGCCTTGTCGCTGCGGGTCT +
Preference number: 5 (lower is better)
Translates to: TRTAKQEDRTQRHLEKPPSLVSP*PCRCGS
Trigger: AGACCCGCAGCGACAAGGCAAGGGGGAGACGAGGGA...TGGTGGCTTCTCTAGGTGTCGTTGTGTGCGGTCCTCTTGTTTGGCTGTGCGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430669.6
CDS-3UTR CAA 90 bp ACACACGCACGCACGCACACACACACACACACACCCAGCAGCCACAAGCGGCTCACCTTGTCCTCCTCTTaGCCTGGCTCTAGGTCCCTT +
Preference number: 5 (lower is better)
Translates to: THARTHTHTHTPSSHKRLTLSSS*PGSRSL
Trigger: AAGGGACCTAGAGCCAGGCAAAGAGGAGGACAAGGT...GAGCCGCTTGTGGCTGCTGGGTGTGTGTGTGTGTGTGTGCGTGCGTGCGTGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430669.6
CDS-3UTR CAA 90 bp ACACACGCACGCACGCACACACACACACACACACCCAGCAGCCACAAGCGGCTCCCAAAGGGTCGAAGTTaGTCCACCGCAAAGGAGGTT +
Preference number: 5 (lower is better)
Translates to: THARTHTHTHTPSSHKRLPKGRS*STAKEV
Trigger: AACCTCCTTTGCGGTGGACAAACTTCGACCCTTTGG...GAGCCGCTTGTGGCTGCTGGGTGTGTGTGTGTGTGTGTGCGTGCGTGCGTGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CAA 90 bp ACACGCACAGCCAAACAAGAGGACCGCACACAACGACACCTAGAGAAGCCACCAGGGAGAGCAGGTCCCTaGTGGAGCTGGTGCTCTCTG +
Preference number: 5 (lower is better)
Translates to: TRTAKQEDRTQRHLEKPPGRAGP*WSWCSL
Trigger: CAGAGAGCACCAGCTCCACAAGGGACCTGCTCTCCC...TGGTGGCTTCTCTAGGTGTCGTTGTGTGCGGTCCTCTTGTTTGGCTGTGCGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CAA 90 bp TGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCATCGCGGCTGCCGGTTaGCACCAGGAGTTTGTAGGC +
Preference number: 5 (lower is better)
Translates to: WPSQGSALGMSPNSLTPTIAAAG*HQEFVG
Trigger: GCCTACAAACTCCTGGTGCAAACCGGCAGCCGCGAT...GGTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CAA 90 bp GGGGCTGCTTGTGACCTCTCCCTTCATCTGGGGGCTGGTTACACGGATGCGTTCCCGGGATTCTCAGCCTaGTTTCAGGCATGTAGTCGG +
Preference number: 5 (lower is better)
Translates to: GAACDLSLHLGAGYTDAFPGFSA*FQACSR
Trigger: CCGACTACATGCCTGAAACAAGGCTGAGAATCCCGG...GAACGCATCCGTGTAACCAGCCCCCAGATGAAGGGAGAGGTCACAAGCAGCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430669.6
CDS-3UTR CAA 90 bp TGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCAGGCGGTTCAAGCCGTaGGCTGGAGACACCTCAGGA +
Preference number: 5 (lower is better)
Translates to: WPSQGSALGMSPNSLTPTRRFKP*AGDTSG
Trigger: TCCTGAGGTGTCTCCAGCCAACGGCTTGAACCGCCT...GGTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CAA 90 bp GACACTGTCGTCTGGGAACTATACTCCGAGTCGGAGGAATCAGACCCGCTGTGCAGGCGGTTCAAGCCGTaGGCTGGAGACACCTCAGGA +
Preference number: 5 (lower is better)
Translates to: DTVVWELYSESEESDPLCRRFKP*AGDTSG
Trigger: TCCTGAGGTGTCTCCAGCCAACGGCTTGAACCGCCT...GCACAGCGGGTCTGATTCCTCCGACTCGGAGTATAGTTCCCAGACGACAGTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CAA 90 bp TGGGGTCCTGGATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGACCCCAGCGGGCCCTATaGCTAGGGCCAGAATGCCCT +
Preference number: 5 (lower is better)
Translates to: WGPGWQPMIIRDAVDTRRPQRAL*LGPECP
Trigger: AGGGCATTCTGGCCCTAGCAATAGGGCCCGCTGGGG...TCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCATCCAGGACCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CAA 90 bp GGCTCAGGGGAGGGTGTGGGCAGGCGGTTCAAGCCGTTGGCTGGAGACACCTCACTATTGGGTGATCCTTaGGCTTCAAGCTGCAGAGTT +
Preference number: 5 (lower is better)
Translates to: GSGEGVGRRFKPLAGDTSLLGDP*ASSCRV
Trigger: AACTCTGCAGCTTGAAGCCAAAGGATCACCCAATAG...TGAGGTGTCTCCAGCCAACGGCTTGAACCGCCTGCCCACACCCTCCCCTGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS CCA 90 bp CACGACTTACTCGTCCTCCAACTTCCACCCACAGCTCCTCCACGTTaGTCTCGAGGTTCGCTGCTTTTAATCCCACCGCGAAGGCCCCAA +
Preference number: 5 (lower is better)
Translates to: HDLLVLQLPPTAPPR*SRGSLLLIPPRRPQ
Trigger: TTGGGGCCTTCGCGGTGGGATTAAAAGCAGCGAACCTCGAGACCAACGTGGAGGAGCTGTGGGTGGAAGTTGGAGGACGAGTAAGTCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
ENST00000437951.6
ENST00000468211.6
ENST00000546820.5
ENST00000547672.5
ENST00000550914.6
ENST00000551630.1
ENST00000551845.5
ENST00000553011.5
CDS CCA 90 bp CACCGCAAAGGAGGTTTACCTCTTCCACCCACAGCTCCTCCACGTTaGTCTCGAGGTTCGCTGCTTTTAATCCCACCGCGAAGGCCCCAA +
Preference number: 5 (lower is better)
Translates to: HRKGGLPLPPTAPPR*SRGSLLLIPPRRPQ
Trigger: TTGGGGCCTTCGCGGTGGGATTAAAAGCAGCGAACCTCGAGACCAACGTGGAGGAGCTGTGGGTGGAAGAGGTAAACCTCCTTTGCGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000548420.1
ENST00000548945.6
CDS-3UTR CAA 90 bp ACACGCACAGCCAAACAAGAGGACCGCACACAACGACACCTAGAGAAGCCACCACACAGCTCCTCCACGTaGGTCTCGAGGTTCGCTGCT +
Preference number: 5 (lower is better)
Translates to: TRTAKQEDRTQRHLEKPPHSSST*VSRFAA
Trigger: AGCAGCGAACCTCGAGACCAACGTGGAGGAGCTGTG...TGGTGGCTTCTCTAGGTGTCGTTGTGTGCGGTCCTCTTGTTTGGCTGTGCGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CAA 90 bp ATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATTGGGGTCCTGGATGGCATCTGGATCGGCCGGATaGAGGCAGGGGCGGTCCATG +
Preference number: 5 (lower is better)
Translates to: IREKEIIPLKHKLGSWMASGSAG*RQGRSM
Trigger: CATGGACCGCCCCTGCCTCAATCCGGCCGATCCAGA...TGCCATCCAGGACCCCAATTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CAA 90 bp CTCCGAGTCGGAGGAATCAGACCCGCTGTGCGTGTGGCCGGGCGGCATGGCGAAGCCATATCAAGAGGTTaGGTTGAATTTTTGTTGGGG +
Preference number: 5 (lower is better)
Translates to: LRVGGIRPAVRVAGRHGEAISRG*VEFLLG
Trigger: CCCCAACAAAAATTCAACCAAACCTCTTGATATGGC...TTCGCCATGCCGCCCGGCCACACGCACAGCGGGTCTGATTCCTCCGACTCGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CAA 90 bp ATGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACATCGCGGCTGCCGGTTaGCACCAGGAGTTTGTAGGC +
Preference number: 5 (lower is better)
Translates to: MAQPRLSTRHVTEFSNTHIAAAG*HQEFVG
Trigger: GCCTACAAACTCCTGGTGCAAACCGGCAGCCGCGAT...GTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CAA 90 bp ATGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACAGGCGGTTCAAGCCGTaGGCTGGAGACACCTCAGGA +
Preference number: 5 (lower is better)
Translates to: MAQPRLSTRHVTEFSNTHRRFKP*AGDTSG
Trigger: TCCTGAGGTGTCTCCAGCCAACGGCTTGAACCGCCT...GTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CAA 90 bp TGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCCATCCACTCTTGAATTaGGGGGTGTTGGGGGAGGGG +
Preference number: 5 (lower is better)
Translates to: WPSQGSALGMSPNSLTPTHPLLN*GVLGEG
Trigger: CCCCTCCCCCAACACCCCCAAATTCAAGAGTGGATG...GGTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CAA 90 bp ATGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACGGTGCTGGTGTGGATTaGGATGGGGAGCCGACACTG +
Preference number: 5 (lower is better)
Translates to: MAQPRLSTRHVTEFSNTHGAGVD*DGEPTL
Trigger: CAGTGTCGGCTCCCCATCCAAATCCACACCAGCACC...GTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CAA 90 bp TCGGGGATGCCGAGAACCCCAGGAGAACCTTGTCCTCCTCTTTGCCTGGCTCTAGCGCGGACGCTGGGCTaGGATTTCACATCAATTCCT +
Preference number: 5 (lower is better)
Translates to: SGMPRTPGEPCPPLCLALARTLG*DFTSIP
Trigger: AGGAATTGATGTGAAATCCAAGCCCAGCGTCCGCGC...TAGAGCCAGGCAAAGAGGAGGACAAGGTTCTCCTGGGGTTCTCGGCATCCCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430669.6
CDS-3UTR CAA 90 bp ACACGCACAGCCAAACAAGAGGACCGCACACAACGACACCTAGAGAAGCCACCAGTGCTGTTTGTGTCCTaGTGGCGCTGCACCGACCCT +
Preference number: 5 (lower is better)
Translates to: TRTAKQEDRTQRHLEKPPVLFVS*WRCTDP
Trigger: AGGGTCGGTGCAGCGCCACAAGGACACAAACAGCAC...TGGTGGCTTCTCTAGGTGTCGTTGTGTGCGGTCCTCTTGTTTGGCTGTGCGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430669.6
CDS-3UTR CAA 90 bp ATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAGTCTAGCTTTTGGGCTCGGGCTCCGGTaGACAGACCAGCCGCTGCTG +
Preference number: 5 (lower is better)
Translates to: MAANDHKRCRRHEESLAFGLGLR*TDQPLL
Trigger: CAGCAGCGGCTGGTCTGTCAACCGGAGCCCGAGCCC...AAAAGCTAGACTCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331920.11
CDS-3UTR CAA 90 bp CGCCACCCTCCGTGTGCCCGACACAGCAGCATGGCAACGCCAGAAATGAACAAACCAAAGGGTCGAAGTTaGTCCACCGCAAAGGAGGTT +
Preference number: 5 (lower is better)
Translates to: RHPPCARHSSMATPEMNKPKGRS*STAKEV
Trigger: AACCTCCTTTGCGGTGGACAAACTTCGACCCTTTGG...TTTGTTCATTTCTGGCGTTGCCATGCTGCTGTGTCGGGCACACGGAGGGTGGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CAA 90 bp ACACACGCACGCACGCACACACACACACACACACCCAGCAGCCACAAGCGGCTCACATACTCGTACCCCTaGAAGTGCTCGTACATTTGC +
Preference number: 5 (lower is better)
Translates to: THARTHTHTHTPSSHKRLTYSYP*KCSYIC
Trigger: GCAAATGTACGAGCACTTCAAGGGGTACGAGTATGT...GAGCCGCTTGTGGCTGCTGGGTGTGTGTGTGTGTGTGTGCGTGCGTGCGTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CAA 90 bp ACTCTGCATGGCTGGAGGGCACAGACTCCACGCAGGGATGCGTTTCTGGAACTAAGGATGGCTGCCGCTTaGTCCTCGTTCCAGTTGATG +
Preference number: 5 (lower is better)
Translates to: TLHGWRAQTPRRDAFLELRMAAA*SSFQLM
Trigger: CATCAACTGGAACGAGGACAAAGCGGCAGCCATCCT...TAGTTCCAGAAACGCATCCCTGCGTGGAGTCTGTGCCCTCCAGCCATGCAGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CAA 90 bp TGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCAAGAAGGCTGTGACATaGCTGATGGACGTGAGGGCC +
Preference number: 5 (lower is better)
Translates to: WPSQGSALGMSPNSLTPTKKAVT*LMDVRA
Trigger: GGCCCTCACGTCCATCAGCAATGTCACAGCCTTCTT...GGTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CAA 90 bp ACTCTGCATGGCTGGAGGGCACAGACTCCACGCAGGGATGCGTTTCTGGAACTAAAGAAGGCTGTGACATaGCTGATGGACGTGAGGGCC +
Preference number: 5 (lower is better)
Translates to: TLHGWRAQTPRRDAFLELKKAVT*LMDVRA
Trigger: GGCCCTCACGTCCATCAGCAATGTCACAGCCTTCTT...TAGTTCCAGAAACGCATCCCTGCGTGGAGTCTGTGCCCTCCAGCCATGCAGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CAA 90 bp TGGGGTCCTGGATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAATCGCGGCTGCCGGTTaGCACCAGGAGTTTGTAGGC +
Preference number: 5 (lower is better)
Translates to: WGPGWQPMIIRDAVDTRRIAAAG*HQEFVG
Trigger: GCCTACAAACTCCTGGTGCAAACCGGCAGCCGCGAT...TCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCATCCAGGACCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CAA 90 bp TGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCCCGGGATTCTCAGCCTaGTTTCAGGCATGTAGTCGG +
Preference number: 5 (lower is better)
Translates to: WPSQGSALGMSPNSLTPTPGFSA*FQACSR
Trigger: CCGACTACATGCCTGAAACAAGGCTGAGAATCCCGG...GGTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CAA 90 bp CCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAAGGCTTCCACGATCACTaGGTGGGCAGGGCCTCCCGC +
Preference number: 5 (lower is better)
Translates to: PASITMIREKEIIPLKHKGFHDH*VGRASR
Trigger: GCGGGAGGCCCTGCCCACCAAGTGATCGTGGAAGCC...TTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CAA 90 bp ACACGCACAGCCAAACAAGAGGACCGCACACAACGACACCTAGAGAAGCCACCACATCCACTCTTGAATTaGGGGGTGTTGGGGGAGGGG +
Preference number: 5 (lower is better)
Translates to: TRTAKQEDRTQRHLEKPPHPLLN*GVLGEG
Trigger: CCCCTCCCCCAACACCCCCAAATTCAAGAGTGGATG...TGGTGGCTTCTCTAGGTGTCGTTGTGTGCGGTCCTCTTGTTTGGCTGTGCGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CAA 90 bp ACACGCACAGCCAAACAAGAGGACCGCACACAACGACACCTAGAGAAGCCACCAGGGCCACATCCACTCTaGAATTTGGGGGTGTTGGGG +
Preference number: 5 (lower is better)
Translates to: TRTAKQEDRTQRHLEKPPGPHPL*NLGVLG
Trigger: CCCCAACACCCCCAAATTCAAGAGTGGATGTGGCCC...TGGTGGCTTCTCTAGGTGTCGTTGTGTGCGGTCCTCTTGTTTGGCTGTGCGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CAA 90 bp ACTCTGCATGGCTGGAGGGCACAGACTCCACGCAGGGATGCGTTTCTGGAACTACTTCAAGCTGCAGAGTaGTCTTTGCTGCCAGCCCCA +
Preference number: 5 (lower is better)
Translates to: TLHGWRAQTPRRDAFLELLQAAE*SLLPAP
Trigger: TGGGGCTGGCAGCAAAGACAACTCTGCAGCTTGAAG...TAGTTCCAGAAACGCATCCCTGCGTGGAGTCTGTGCCCTCCAGCCATGCAGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CAA 90 bp CGGGGTTTTCTGTGGCTTCCACGATCACTTGGTGGGCAGGGCCTCCCGCGCCCTTTAGATTCCCAAGAGTaGACACCAAAGTCCAATGCT +
Preference number: 5 (lower is better)
Translates to: RGFLWLPRSLGGQGLPRPLDSQE*TPKSNA
Trigger: AGCATTGGACTTTGGTGTCAACTCTTGGGAATCTAA...AGGGCGCGGGAGGCCCTGCCCACCAAGTGATCGTGGAAGCCACAGAAAACCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CAA 90 bp GACACTGTCGTCTGGGAACTATACTCCGAGTCGGAGGAATCAGACCCGCTGTGCCTCCATGATGCCAAATaGCCCAGTGGGCTATGCCAC +
Preference number: 5 (lower is better)
Translates to: DTVVWELYSESEESDPLCLHDAK*PSGLCH
Trigger: GTGGCATAGCCCACTGGGCAATTTGGCATCATGGAG...GCACAGCGGGTCTGATTCCTCCGACTCGGAGTATAGTTCCCAGACGACAGTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CAA 90 bp CGCCACCCTCCGTGTGCCCGACACAGCAGCATGGCAACGCCAGAAATGAACAAAGGGGGTCCCCATTATTaGCTGTTGTGCAAATGGCAC +
Preference number: 5 (lower is better)
Translates to: RHPPCARHSSMATPEMNKGGPHY*LLCKWH
Trigger: GTGCCATTTGCACAACAGCAAATAATGGGGACCCCC...TTTGTTCATTTCTGGCGTTGCCATGCTGCTGTGTCGGGCACACGGAGGGTGGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS CCA 90 bp GGAGGTTTACCTCTGTTGTACATGTATACATGGACACGGCTGGCCTaGAGTGCCGAGTCCAGGTGTTGTAGGAGCGCTTCTGTGGTCAGG +
Preference number: 5 (lower is better)
Translates to: GGLPLLYMYTWTRLA*SAESRCCRSASVVR
Trigger: CCTGACCACAGAAGCGCTCCTACAACACCTGGACTCGGCACTCCAGGCCAGCCGTGTCCATGTATACATGTACAACAGAGGTAAACCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS CCA 90 bp AGTGAAGAGCGGCACAGGAAACACAGCATTCAGCCGGCCTACACGTaGGACATCCCCGTGTCACTACTGACCTCAGGATATGGTCCAAAG +
Preference number: 5 (lower is better)
Translates to: SEERHRKHSIQPAYT*DIPVSLLTSGYGPK
Trigger: CTTTGGACCATATCCTGAGGTCAGTAGTGACACGGGGATGTCCCACGTGTAGGCCGGCTGAATGCTGTGTTTCCTGTGCCGCTCTTCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546744.5
CDS-3UTR CAA 90 bp ACACGCACAGCCAAACAAGAGGACCGCACACAACGACACCTAGAGAAGCCACCAGGTTTGGTTGAATTTTaGTTGGGGGCTGTGGCGGGG +
Preference number: 5 (lower is better)
Translates to: TRTAKQEDRTQRHLEKPPGLVEF*LGAVAG
Trigger: CCCCGCCACAGCCCCCAACAAAAATTCAACCAAACC...TGGTGGCTTCTCTAGGTGTCGTTGTGTGCGGTCCTCTTGTTTGGCTGTGCGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CAA 90 bp ATGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACGGTTTGGTTGAATTTTaGTTGGGGGCTGTGGCGGGG +
Preference number: 5 (lower is better)
Translates to: MAQPRLSTRHVTEFSNTHGLVEF*LGAVAG
Trigger: CCCCGCCACAGCCCCCAACAAAAATTCAACCAAACC...GTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CAA 90 bp ACACACGCACGCACGCACACACACACACACACACCCAGCAGCCACAAGCGGCTCTGCTCGTACATTTGCTaGGGAGTCATTAACTGGAAC +
Preference number: 5 (lower is better)
Translates to: THARTHTHTHTPSSHKRLCSYIC*GVINWN
Trigger: GTTCCAGTTAATGACTCCCAAGCAAATGTACGAGCA...GAGCCGCTTGTGGCTGCTGGGTGTGTGTGTGTGTGTGTGCGTGCGTGCGTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CAA 90 bp ATGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACAGGATGGCTGCCGCTTaGTCCTCGTTCCAGTTGATG +
Preference number: 5 (lower is better)
Translates to: MAQPRLSTRHVTEFSNTHRMAAA*SSFQLM
Trigger: CATCAACTGGAACGAGGACAAAGCGGCAGCCATCCT...GTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CAA 90 bp TCCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAATACGCGACGGGGTCGTaGCTGACCCAAGCCGTCAGG +
Preference number: 5 (lower is better)
Translates to: SSIHHNDPREGDYPPEAQYATGS*LTQAVR
Trigger: CCTGACGGCTTGGGTCAGCAACGACCCCGTCGCGTA...TTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CAA 90 bp CCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATACGCGACGGGGTCGTaGCTGACCCAAGCCGTCAGG +
Preference number: 5 (lower is better)
Translates to: PASITMIREKEIIPLKHKYATGS*LTQAVR
Trigger: CCTGACGGCTTGGGTCAGCAACGACCCCGTCGCGTA...TTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CAA 90 bp CACATCGGTGTGAGAAGCGCTGGTCTACAGCGATTCCACTTCACCATTCACTCTGGCACGGCACTGAGCTaGATTCCGATGAGGCCCATC +
Preference number: 5 (lower is better)
Translates to: HIGVRSAGLQRFHFTIHSGTALS*IPMRPI
Trigger: GATGGGCCTCATCGGAATCAAGCTCAGTGCCGTGCC...AGAGTGAATGGTGAAGTGGAATCGCTGTAGACCAGCGCTTCTCACACCGATGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CAA 90 bp CCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAACCCCAGCGGGCCCTATaGCTAGGGCCAGAATGCCCT +
Preference number: 5 (lower is better)
Translates to: PASITMIREKEIIPLKHKPQRAL*LGPECP
Trigger: AGGGCATTCTGGCCCTAGCAATAGGGCCCGCTGGGG...TTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CAA 90 bp TGGGGTCCTGGATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAGGGCCACATCCACTCTaGAATTTGGGGGTGTTGGGG +
Preference number: 5 (lower is better)
Translates to: WGPGWQPMIIRDAVDTRRGPHPL*NLGVLG
Trigger: CCCCAACACCCCCAAATTCAAGAGTGGATGTGGCCC...TCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCATCCAGGACCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CAA 90 bp GGCTCAGGGGAGGGTGTGGGCAGGCGGTTCAAGCCGTTGGCTGGAGACACCTCAAAACATTTAACTCAGTaGGGCAACTCTCTACTTGGT +
Preference number: 5 (lower is better)
Translates to: GSGEGVGRRFKPLAGDTSKHLTQ*GNSLLG
Trigger: ACCAAGTAGAGAGTTGCCCAACTGAGTTAAATGTTT...TGAGGTGTCTCCAGCCAACGGCTTGAACCGCCTGCCCACACCCTCCCCTGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CAA 90 bp ATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATTGGGGTCCTGGATGGCAGTCCCTTGGCTGCCCTaGTCAGTGGCACTCACCTCA +
Preference number: 5 (lower is better)
Translates to: IREKEIIPLKHKLGSWMAVPWLP*SVALTS
Trigger: TGAGGTGAGTGCCACTGACAAGGGCAGCCAAGGGAC...TGCCATCCAGGACCCCAATTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430669.6
CDS TCA 90 bp GGCCTCCAGGATGGCTGCCGCTTTGTCCTCGTTCCAGTTGATGTGTaGGACATACTCGTACCCCTTGAAGTGCTCGTACATTTGCTTGGG +
Preference number: 5 (lower is better)
Translates to: GLQDGCRFVLVPVDV*DILVPLEVLVHLLG
Trigger: CCCAAGCAAATGTACGAGCACTTCAAGGGGTACGAGTATGTCTCACACATCAACTGGAACGAGGACAAAGCGGCAGCCATCCTGGAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331920.11
ENST00000375271.4
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
ENST00000437951.6
CDS CCA 90 bp GCAAAGGAGGTTTACCTCTGTTGTACATGTATACATGGACACGGCTaGCCTGGAGTGCCGAGTCCAGGTGTTGTAGGAGCGCTTCTGTGG +
Preference number: 5 (lower is better)
Translates to: AKEVYLCCTCIHGHG*PGVPSPGVVGALLW
Trigger: CCACAGAAGCGCTCCTACAACACCTGGACTCGGCACTCCAGGCCAGCCGTGTCCATGTATACATGTACAACAGAGGTAAACCTCCTTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CAA 90 bp CCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAACCGGACTCTGCTTTCTaGTGCTCCTCGGCAACCCGC +
Preference number: 5 (lower is better)
Translates to: PASITMIREKEIIPLKHKPDSAF*CSSATR
Trigger: GCGGGTTGCCGAGGAGCACAAGAAAGCAGAGTCCGG...TTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331920.11
CDS-3UTR CAA 90 bp ATGATGCCATCTGCATCCACCAGACGCTGTTTAGTCAACTGGCTGATGTCGATGCACAGCTCCTCCACGTaGGTCTCGAGGTTCGCTGCT +
Preference number: 5 (lower is better)
Translates to: MMPSASTRRCLVNWLMSMHSSST*VSRFAA
Trigger: AGCAGCGAACCTCGAGACCAACGTGGAGGAGCTGTG...CATCGACATCAGCCAGTTGACTAAACAGCGTCTGGTGGATGCAGATGGCATCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CAA 90 bp AAGTTTGTCCACCGCAAAGGAGGTTTACCTAGGAGGTATGCTGTCCCAGACTGTCACAGCTCCTCCACGTaGGTCTCGAGGTTCGCTGCT +
Preference number: 5 (lower is better)
Translates to: KFVHRKGGLPRRYAVPDCHSSST*VSRFAA
Trigger: AGCAGCGAACCTCGAGACCAACGTGGAGGAGCTGTG...ACAGTCTGGGACAGCATACCTCCTAGGTAAACCTCCTTTGCGGTGGACAAACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550914.6
CDS-3UTR CAA 90 bp ATGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCCAAAGGGTCGAAGTTaGTCCACCGCAAAGGAGGTT +
Preference number: 5 (lower is better)
Translates to: MAQPRLSTRHVTEFSNTHPKGRS*STAKEV
Trigger: AACCTCCTTTGCGGTGGACAAACTTCGACCCTTTGG...GTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CAA 90 bp ACACGCACAGCCAAACAAGAGGACCGCACACAACGACACCTAGAGAAGCCACCACCAAAGGGTCGAAGTTaGTCCACCGCAAAGGAGGTT +
Preference number: 5 (lower is better)
Translates to: TRTAKQEDRTQRHLEKPPPKGRS*STAKEV
Trigger: AACCTCCTTTGCGGTGGACAAACTTCGACCCTTTGG...TGGTGGCTTCTCTAGGTGTCGTTGTGTGCGGTCCTCTTGTTTGGCTGTGCGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CAA 90 bp ATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAGTCTAGCTTTTTCTGGATCGGCCGGATaGAGGCAGGGGCGGTCCATG +
Preference number: 5 (lower is better)
Translates to: MAANDHKRCRRHEESLAFSGSAG*RQGRSM
Trigger: CATGGACCGCCCCTGCCTCAATCCGGCCGATCCAGA...AAAAGCTAGACTCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CAA 90 bp TGGGGTCCTGGATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAGGTTTGGTTGAATTTTaGTTGGGGGCTGTGGCGGGG +
Preference number: 5 (lower is better)
Translates to: WGPGWQPMIIRDAVDTRRGLVEF*LGAVAG
Trigger: CCCCGCCACAGCCCCCAACAAAAATTCAACCAAACC...TCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCATCCAGGACCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CAA 90 bp ACACACGCACGCACGCACACACACACACACACACCCAGCAGCCACAAGCGGCTCGCCATATCAAGAGGTTaGGTTGAATTTTTGTTGGGG +
Preference number: 5 (lower is better)
Translates to: THARTHTHTHTPSSHKRLAISRG*VEFLLG
Trigger: CCCCAACAAAAATTCAACCAAACCTCTTGATATGGC...GAGCCGCTTGTGGCTGCTGGGTGTGTGTGTGTGTGTGTGCGTGCGTGCGTGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CAA 90 bp TCGGGGATGCCGAGAACCCCAGGAGAACCTTGTCCTCCTCTTTGCCTGGCTCTATTGTCCTCGTTCCAGTaGATGTGTGAGACATACTCG +
Preference number: 5 (lower is better)
Translates to: SGMPRTPGEPCPPLCLALLSSFQ*MCETYS
Trigger: CGAGTATGTCTCACACATCAACTGGAACGAGGACAA...TAGAGCCAGGCAAAGAGGAGGACAAGGTTCTCCTGGGGTTCTCGGCATCCCCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430669.6
CDS-3UTR CAA 90 bp ATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAGTCTAGCTTTTCGGTGTGGCCGGATGTaGGCCTGGGAGGCAGCATAC +
Preference number: 5 (lower is better)
Translates to: MAANDHKRCRRHEESLAFRCGRM*AWEAAY
Trigger: GTATGCTGCCTCCCAGGCCAACATCCGGCCACACCG...AAAAGCTAGACTCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CAA 90 bp TGGGGTCCTGGATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGACCGGGATTCTCAGCCTaGTTTCAGGCATGTAGTCGG +
Preference number: 5 (lower is better)
Translates to: WGPGWQPMIIRDAVDTRRPGFSA*FQACSR
Trigger: CCGACTACATGCCTGAAACAAGGCTGAGAATCCCGG...TCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCATCCAGGACCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CAA 90 bp CCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAAACAGCCCTGCGGTTCTaGTCGCCGATGGCCGTCAGA +
Preference number: 5 (lower is better)
Translates to: PASITMIREKEIIPLKHKTALRF*SPMAVR
Trigger: TCTGACGGCCATCGGCGACAAGAACCGCAGGGCTGT...TTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS TCA 90 bp ACAGCATTCAGCCGGCCTACACGTGGGACATCCCCGTGTCACTACTaGCCTCAGGATATGGTCCAAAGAAAGACAAAAGCACGGGAAGCA +
Preference number: 5 (lower is better)
Translates to: TAFSRPTRGTSPCHY*PQDMVQRKTKAREA
Trigger: TGCTTCCCGTGCTTTTGTCTTTCTTTGGACCATATCCTGAGGTCAGTAGTGACACGGGGATGTCCCACGTGTAGGCCGGCTGAATGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546744.5
CDS-3UTR CAA 90 bp TCCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAACACAGCTCCTCCACGTaGGTCTCGAGGTTCGCTGCT +
Preference number: 5 (lower is better)
Translates to: SSIHHNDPREGDYPPEAQHSSST*VSRFAA
Trigger: AGCAGCGAACCTCGAGACCAACGTGGAGGAGCTGTG...TTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CAA 90 bp TGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCACATACTCGTACCCCTaGAAGTGCTCGTACATTTGC +
Preference number: 5 (lower is better)
Translates to: WPSQGSALGMSPNSLTPTTYSYP*KCSYIC
Trigger: GCAAATGTACGAGCACTTCAAGGGGTACGAGTATGT...GGTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CAA 90 bp TGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCTTGTCCTCGTTCCAGTaGATGTGTGAGACATACTCG +
Preference number: 5 (lower is better)
Translates to: WPSQGSALGMSPNSLTPTLSSFQ*MCETYS
Trigger: CGAGTATGTCTCACACATCAACTGGAACGAGGACAA...GGTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CAA 90 bp TGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCCCACTACCTTGGCTTTaGGTTTCAAGAGGAAAGGAG +
Preference number: 5 (lower is better)
Translates to: WPSQGSALGMSPNSLTPTPLPWL*VSRGKE
Trigger: CTCCTTTCCTCTTGAAACCAAAAGCCAAGGTAGTGG...GGTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CAA 90 bp TGCCTGGATTCGGGATGGACCACAGTGGAGTGGGCGAAGACGGGGTTTTCTGTGAAGATCACCACTACCTaGGCTTTTGGTTTCAAGAGG +
Preference number: 5 (lower is better)
Translates to: CLDSGWTTVEWAKTGFSVKITTT*AFGFKR
Trigger: CCTCTTGAAACCAAAAGCCAAGGTAGTGGTGATCTT...CACAGAAAACCCCGTCTTCGCCCACTCCACTGTGGTCCATCCCGAATCCAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CAA 90 bp TCGGGGATGCCGAGAACCCCAGGAGAACCTTGTCCTCCTCTTTGCCTGGCTCTAAAGATCACCACTACCTaGGCTTTTGGTTTCAAGAGG +
Preference number: 5 (lower is better)
Translates to: SGMPRTPGEPCPPLCLALKITTT*AFGFKR
Trigger: CCTCTTGAAACCAAAAGCCAAGGTAGTGGTGATCTT...TAGAGCCAGGCAAAGAGGAGGACAAGGTTCTCCTGGGGTTCTCGGCATCCCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000430669.6
CDS-3UTR CAA 90 bp AAGAGCACTAATGACGGGGAGGATGGAGACAATGTTTGGATTTACTTAGGAAGCCGGTGTGGCCGGATGTaGGCCTGGGAGGCAGCATAC +
Preference number: 5 (lower is better)
Translates to: KSTNDGEDGDNVWIYLGSRCGRM*AWEAAY
Trigger: GTATGCTGCCTCCCAGGCCAACATCCGGCCACACCG...GCTTCCTAAGTAAATCCAAACATTGTCTCCATCCTCCCCGTCATTAGTGCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CAA 90 bp TCCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAGGCACGGCACTGAGCTaGATTCCGATGAGGCCCATC +
Preference number: 5 (lower is better)
Translates to: SSIHHNDPREGDYPPEAQGTALS*IPMRPI
Trigger: GATGGGCCTCATCGGAATCAAGCTCAGTGCCGTGCC...TTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CAA 90 bp CCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAAGGCACGGCACTGAGCTaGATTCCGATGAGGCCCATC +
Preference number: 5 (lower is better)
Translates to: PASITMIREKEIIPLKHKGTALS*IPMRPI
Trigger: GATGGGCCTCATCGGAATCAAGCTCAGTGCCGTGCC...TTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CAA 90 bp ATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAGTCTAGCTTTTACAGCCCTGCGGTTCTaGTCGCCGATGGCCGTCAGA +
Preference number: 5 (lower is better)
Translates to: MAANDHKRCRRHEESLAFTALRF*SPMAVR
Trigger: TCTGACGGCCATCGGCGACAAGAACCGCAGGGCTGT...AAAAGCTAGACTCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CAA 90 bp ATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATTGGGGTCCTGGATGGCAAGCAAAACCAGCCCATaGAGAACGCCGAGGATGGTG +
Preference number: 5 (lower is better)
Translates to: IREKEIIPLKHKLGSWMASKTSP*RTPRMV
Trigger: CACCATCCTCGGCGTTCTCAATGGGCTGGTTTTGCT...TGCCATCCAGGACCCCAATTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CAA 90 bp GGCCGCAGCACCATGGCAGAGGAGGAGAGTGCAGAAGTAGTTCTGCTTTCCCACTTTTGCCGGGCTGATTaGAAAGGATTAGGTGGATGT +
Preference number: 5 (lower is better)
Translates to: GRSTMAEEESAEVVLLSHFCRAD*KGLGGC
Trigger: ACATCCACCTAATCCTTTCAAATCAGCCCGGCAAAA...GTGGGAAAGCAGAACTACTTCTGCACTCTCCTCCTCTGCCATGGTGCTGCGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CAA 90 bp CCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAAGGTGCTGGTGTGGATTaGGATGGGGAGCCGACACTG +
Preference number: 5 (lower is better)
Translates to: PASITMIREKEIIPLKHKGAGVD*DGEPTL
Trigger: CAGTGTCGGCTCCCCATCCAAATCCACACCAGCACC...TTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CAA 90 bp TGCCTGGATTCGGGATGGACCACAGTGGAGTGGGCGAAGACGGGGTTTTCTGTGGCCACATTAAGACATTaGCATCCCATCCATCTAGCT +
Preference number: 5 (lower is better)
Translates to: CLDSGWTTVEWAKTGFSVATLRH*HPIHLA
Trigger: AGCTAGATGGATGGGATGCAAATGTCTTAATGTGGC...CACAGAAAACCCCGTCTTCGCCCACTCCACTGTGGTCCATCCCGAATCCAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CAA 90 bp ATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAGTCTAGCTTTTCGTCTCCCCCTTGCCTaGTCGCTGCGGGTCTCTTTG +
Preference number: 5 (lower is better)
Translates to: MAANDHKRCRRHEESLAFRLPLA*SLRVSL
Trigger: CAAAGAGACCCGCAGCGACAAGGCAAGGGGGAGACG...AAAAGCTAGACTCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430669.6
CDS-3UTR CAA 90 bp CCAATTTCCACTGCCTGTTGTACATGTATACATGGACACGGCTGGCCTGGAGTGTACTCGTCCTCCAACTaGTCGCTGCGGGTCTCTTTG +
Preference number: 5 (lower is better)
Translates to: PISTACCTCIHGHGWPGVYSSSN*SLRVSL
Trigger: CAAAGAGACCCGCAGCGACAAGTTGGAGGACGAGTA...CACTCCAGGCCAGCCGTGTCCATGTATACATGTACAACAGGCAGTGGAAATTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551623.1
CDS CCA 90 bp TCGTACCCCTTGAAGTGCTCGTACATTTGCTTGGGAGTCATTAACTaGAACATGGTCTGCAGGGCATGGGCGCTGACGAGTTTTCCAGTG +
Preference number: 5 (lower is better)
Translates to: SYPLKCSYICLGVIN*NMVCRAWALTSFPV
Trigger: CACTGGAAAACTCGTCAGCGCCCATGCCCTGCAGACCATGTTCCAGTTAATGACTCCCAAGCAAATGTACGAGCACTTCAAGGGGTACGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000331920.11
ENST00000375271.4
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
ENST00000437951.6
CDS-3UTR CAA 90 bp TCCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAACCAGTAGCCTTCCCCTaGGAAATCTGCTCCAGAGCG +
Preference number: 5 (lower is better)
Translates to: SSIHHNDPREGDYPPEAQPVAFP*EICSRA
Trigger: CGCTCTGGAGCAGATTTCCAAGGGGAAGGCTACTGG...TTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331920.11
CDS-3UTR CAA 90 bp GGGGCTGCTTGTGACCTCTCCCTTCATCTGGGGGCTGGTTACACGGATGCGTTCAATTTCCACTGCCTGTaGTACATGTATACATGGACA +
Preference number: 5 (lower is better)
Translates to: GAACDLSLHLGAGYTDAFNFHCL*YMYTWT
Trigger: TGTCCATGTATACATGTACAACAGGCAGTGGAAATT...GAACGCATCCGTGTAACCAGCCCCCAGATGAAGGGAGAGGTCACAAGCAGCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430669.6
CDS-3UTR CAA 90 bp CGCAAAGGAGGTTTACCTAGGAGGTATGCTGTCCCAGACTGTAATTTCGCCCCTCCAAAGGGTCGAAGTTaGTCCACCGCAAAGGAGGTT +
Preference number: 5 (lower is better)
Translates to: RKGGLPRRYAVPDCNFAPPKGRS*STAKEV
Trigger: AACCTCCTTTGCGGTGGACAAACTTCGACCCTTTGG...AGGGGCGAAATTACAGTCTGGGACAGCATACCTCCTAGGTAAACCTCCTTTGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550914.6
CDS-3UTR CAA 90 bp ATGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACTTGTCCTCGTTCCAGTaGATGTGTGAGACATACTCG +
Preference number: 5 (lower is better)
Translates to: MAQPRLSTRHVTEFSNTHLSSFQ*MCETYS
Trigger: CGAGTATGTCTCACACATCAACTGGAACGAGGACAA...GTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CAA 90 bp ATGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCCACTACCTTGGCTTTaGGTTTCAAGAGGAAAGGAG +
Preference number: 5 (lower is better)
Translates to: MAQPRLSTRHVTEFSNTHPLPWL*VSRGKE
Trigger: CTCCTTTCCTCTTGAAACCAAAAGCCAAGGTAGTGG...GTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CAA 90 bp ATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAGTCTAGCTTTTGGTGCTGGTGTGGATTaGGATGGGGAGCCGACACTG +
Preference number: 5 (lower is better)
Translates to: MAANDHKRCRRHEESLAFGAGVD*DGEPTL
Trigger: CAGTGTCGGCTCCCCATCCAAATCCACACCAGCACC...AAAAGCTAGACTCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CAA 90 bp AAAGACTGGCAAATATTGGTAAAAGGTGGTGCTGTTTGTGTCCTTGTGGCGCTGGGTGCTGGTGTGGATTaGGATGGGGAGCCGACACTG +
Preference number: 5 (lower is better)
Translates to: KDWQILVKGGAVCVLVALGAGVD*DGEPTL
Trigger: CAGTGTCGGCTCCCCATCCAAATCCACACCAGCACC...CAGCGCCACAAGGACACAAACAGCACCACCTTTTACCAATATTTGCCAGTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430669.6
CDS-3UTR CAA 90 bp CCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAAAACCCCAGGAGAACCTaGTCCTCCTCTTTGCCTGGC +
Preference number: 5 (lower is better)
Translates to: PASITMIREKEIIPLKHKNPRRT*SSSLPG
Trigger: GCCAGGCAAAGAGGAGGACAAGGTTCTCCTGGGGTT...TTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000430669.6
CDS CCA 90 bp AAAAATTTCTCACTGTTGTACATGTATACATGGACACGGCTGGCCTaGAGTGCCGAGTCCAGGTGTTGTAGGAGCGCTTCTGTGGTCAGG +
Preference number: 5 (lower is better)
Translates to: KNFSLLYMYTWTRLA*SAESRCCRSASVVR
Trigger: CCTGACCACAGAAGCGCTCCTACAACACCTGGACTCGGCACTCCAGGCCAGCCGTGTCCATGTATACATGTACAACAGTGAGAAATTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550914.6
CDS CCA 90 bp GAGACAAAAATTTCTCACTGTTGTACATGTATACATGGACACGGCTaGCCTGGAGTGCCGAGTCCAGGTGTTGTAGGAGCGCTTCTGTGG +
Preference number: 5 (lower is better)
Translates to: ETKISHCCTCIHGHG*PGVPSPGVVGALLW
Trigger: CCACAGAAGCGCTCCTACAACACCTGGACTCGGCACTCCAGGCCAGCCGTGTCCATGTATACATGTACAACAGTGAGAAATTTTTGTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550914.6
CDS-3UTR CAA 90 bp AAGAGCACTAATGACGGGGAGGATGGAGACAATGTTTGGATTTACTTAGGAAGCCACAGCTCCTCCACGTaGGTCTCGAGGTTCGCTGCT +
Preference number: 5 (lower is better)
Translates to: KSTNDGEDGDNVWIYLGSHSSST*VSRFAA
Trigger: AGCAGCGAACCTCGAGACCAACGTGGAGGAGCTGTG...GCTTCCTAAGTAAATCCAAACATTGTCTCCATCCTCCCCGTCATTAGTGCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CAA 90 bp TGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCGGTCTGTATCATGAGTaGAGGATTAAACATAGCCTC +
Preference number: 5 (lower is better)
Translates to: WPSQGSALGMSPNSLTPTGLYHE*RIKHSL
Trigger: GAGGCTATGTTTAATCCTCAACTCATGATACAGACC...GGTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CAA 90 bp TGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCTATCAAGAGGTTTGGTaGAATTTTTGTTGGGGGCTG +
Preference number: 5 (lower is better)
Translates to: WPSQGSALGMSPNSLTPTYQEVW*NFCWGL
Trigger: CAGCCCCCAACAAAAATTCAACCAAACCTCTTGATA...GGTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CAA 90 bp CCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAAAGGATGGCTGCCGCTTaGTCCTCGTTCCAGTTGATG +
Preference number: 5 (lower is better)
Translates to: PASITMIREKEIIPLKHKRMAAA*SSFQLM
Trigger: CATCAACTGGAACGAGGACAAAGCGGCAGCCATCCT...TTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CAA 90 bp TCCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAAGGATGGCTGCCGCTTaGTCCTCGTTCCAGTTGATG +
Preference number: 5 (lower is better)
Translates to: SSIHHNDPREGDYPPEAQRMAAA*SSFQLM
Trigger: CATCAACTGGAACGAGGACAAAGCGGCAGCCATCCT...TTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CAA 90 bp ATGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACAGAACCATGGCAAAATaGAACACCACTACTACCGCT +
Preference number: 5 (lower is better)
Translates to: MAQPRLSTRHVTEFSNTHRTMAK*NTTTTA
Trigger: AGCGGTAGTAGTGGTGTTCAATTTTGCCATGGTTCT...GTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CAA 90 bp ATGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACAAGATCACCACTACCTaGGCTTTTGGTTTCAAGAGG +
Preference number: 5 (lower is better)
Translates to: MAQPRLSTRHVTEFSNTHKITTT*AFGFKR
Trigger: CCTCTTGAAACCAAAAGCCAAGGTAGTGGTGATCTT...GTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CAA 90 bp TCCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAACCGGGATTCTCAGCCTaGTTTCAGGCATGTAGTCGG +
Preference number: 5 (lower is better)
Translates to: SSIHHNDPREGDYPPEAQPGFSA*FQACSR
Trigger: CCGACTACATGCCTGAAACAAGGCTGAGAATCCCGG...TTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CAA 90 bp AAGAGCACTAATGACGGGGAGGATGGAGACAATGTTTGGATTTACTTAGGAAGCGGCACGGCACTGAGCTaGATTCCGATGAGGCCCATC +
Preference number: 5 (lower is better)
Translates to: KSTNDGEDGDNVWIYLGSGTALS*IPMRPI
Trigger: GATGGGCCTCATCGGAATCAAGCTCAGTGCCGTGCC...GCTTCCTAAGTAAATCCAAACATTGTCTCCATCCTCCCCGTCATTAGTGCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CAA 90 bp TCCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAAGCAAAACCAGCCCATaGAGAACGCCGAGGATGGTG +
Preference number: 5 (lower is better)
Translates to: SSIHHNDPREGDYPPEAQSKTSP*RTPRMV
Trigger: CACCATCCTCGGCGTTCTCAATGGGCTGGTTTTGCT...TTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CAA 90 bp TGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCGGATGGAGACAATGTTaGGATTTACTTAGGAAGCAC +
Preference number: 5 (lower is better)
Translates to: WPSQGSALGMSPNSLTPTGWRQC*DLLRKH
Trigger: GTGCTTCCTAAGTAAATCCAAACATTGTCTCCATCC...GGTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CAA 90 bp TGGGGTCCTGGATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAATAATGGGCCACCTATaGGGTGATCCTTTGGCTTCA +
Preference number: 5 (lower is better)
Translates to: WGPGWQPMIIRDAVDTRRIMGHL*GDPLAS
Trigger: TGAAGCCAAAGGATCACCCAATAGGTGGCCCATTAT...TCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCATCCAGGACCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CAA 90 bp TGGGGTCCTGGATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGATTTCCTTTCTACAGTTaGAAGGAGAGGGAGCGTAGG +
Preference number: 5 (lower is better)
Translates to: WGPGWQPMIIRDAVDTRRFPFYS*KERERR
Trigger: CCTACGCTCCCTCTCCTTCAAACTGTAGAAAGGAAA...TCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCATCCAGGACCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CAA 90 bp CGCCACCCTCCGTGTGCCCGACACAGCAGCATGGCAACGCCAGAAATGAACAAAACTCTCTACTTGGTATaGGCAAACAGGAATTTAGGA +
Preference number: 5 (lower is better)
Translates to: RHPPCARHSSMATPEMNKTLYLV*ANRNLG
Trigger: TCCTAAATTCCTGTTTGCCAATACCAAGTAGAGAGT...TTTGTTCATTTCTGGCGTTGCCATGCTGCTGTGTCGGGCACACGGAGGGTGGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CAA 90 bp AGCACAGCAAAGAAATACCTGGGAGATCAAGAGGAAACGGGAACACGCGCTGTGGCATTTCCCCTGGTTTaGCCTGTGAACTTGTCTCTC +
Preference number: 5 (lower is better)
Translates to: STAKKYLGDQEETGTRAVAFPLV*PVNLSL
Trigger: GAGAGACAAGTTCACAGGCAAAACCAGGGGAAATGC...CACAGCGCGTGTTCCCGTTTCCTCTTGATCTCCCAGGTATTTCTTTGCTGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CAA 90 bp TGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCCTCATTTATTTGACCTaGGTGAGGCCTTTATCAGGT +
Preference number: 5 (lower is better)
Translates to: WPSQGSALGMSPNSLTPTLIYLT*VRPLSG
Trigger: ACCTGATAAAGGCCTCACCAAGGTCAAATAAATGAG...GGTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CAA 90 bp GGCCGCAGCACCATGGCAGAGGAGGAGAGTGCAGAAGTAGTTCTGCTTTCCCACCTGAATACTCTTGTTTaGCGTCAGCCAATTCAAACA +
Preference number: 5 (lower is better)
Translates to: GRSTMAEEESAEVVLLSHLNTLV*RQPIQT
Trigger: TGTTTGAATTGGCTGACGCAAAACAAGAGTATTCAG...GTGGGAAAGCAGAACTACTTCTGCACTCTCCTCCTCTGCCATGGTGCTGCGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CAA 90 bp CCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATCGCTGCGGGTCTCTTaGTCTCCCCTGTCGTCTTTT +
Preference number: 5 (lower is better)
Translates to: PASITMIREKEIIPLKHKSLRVS*SPLSSF
Trigger: AAAAGACGACAGGGGAGACAAAGAGACCCGCAGCGA...TTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430669.6
CDS-3UTR CAA 90 bp TCGGGGATGCCGAGAACCCCAGGAGAACCTTGTCCTCCTCTTTGCCTGGCTCTAAAAGACTGGCAAATATaGGTAAAAGGTGGTGCTGTT +
Preference number: 5 (lower is better)
Translates to: SGMPRTPGEPCPPLCLALKDWQI*VKGGAV
Trigger: AACAGCACCACCTTTTACCAATATTTGCCAGTCTTT...TAGAGCCAGGCAAAGAGGAGGACAAGGTTCTCCTGGGGTTCTCGGCATCCCCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000430669.6
CDS GCA 90 bp TTGATGTGTGAGACATACTCGTACCCCTTGAAGTGCTCGTACATTTaGTTGGGAGTCATTAACTGGAACATGGTCTGCAGGGCATGGGCG +
Preference number: 5 (lower is better)
Translates to: LMCETYSYPLKCSYI*LGVINWNMVCRAWA
Trigger: CGCCCATGCCCTGCAGACCATGTTCCAGTTAATGACTCCCAAGCAAATGTACGAGCACTTCAAGGGGTACGAGTATGTCTCACACATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331920.11
ENST00000375271.4
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
ENST00000437951.6
CDS-3UTR CAA 90 bp ACACGCACAGCCAAACAAGAGGACCGCACACAACGACACCTAGAGAAGCCACCATATCAAGAGGTTTGGTaGAATTTTTGTTGGGGGCTG +
Preference number: 5 (lower is better)
Translates to: TRTAKQEDRTQRHLEKPPYQEVW*NFCWGL
Trigger: CAGCCCCCAACAAAAATTCAACCAAACCTCTTGATA...TGGTGGCTTCTCTAGGTGTCGTTGTGTGCGGTCCTCTTGTTTGGCTGTGCGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CAA 90 bp ACACGCACAGCCAAACAAGAGGACCGCACACAACGACACCTAGAGAAGCCACCAGCCATATCAAGAGGTTaGGTTGAATTTTTGTTGGGG +
Preference number: 5 (lower is better)
Translates to: TRTAKQEDRTQRHLEKPPAISRG*VEFLLG
Trigger: CCCCAACAAAAATTCAACCAAACCTCTTGATATGGC...TGGTGGCTTCTCTAGGTGTCGTTGTGTGCGGTCCTCTTGTTTGGCTGTGCGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CAA 90 bp ATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAGTCTAGCTTTTAAGAAGGCTGTGACATaGCTGATGGACGTGAGGGCC +
Preference number: 5 (lower is better)
Translates to: MAANDHKRCRRHEESLAFKKAVT*LMDVRA
Trigger: GGCCCTCACGTCCATCAGCAATGTCACAGCCTTCTT...AAAAGCTAGACTCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CAA 90 bp ACACGCACAGCCAAACAAGAGGACCGCACACAACGACACCTAGAGAAGCCACCATCCTTACTTTTTCAATaGCCTCCACAAAGTCTGAGG +
Preference number: 5 (lower is better)
Translates to: TRTAKQEDRTQRHLEKPPSLLFQ*PPQSLR
Trigger: CCTCAGACTTTGTGGAGGCAATTGAAAAAGTAAGGA...TGGTGGCTTCTCTAGGTGTCGTTGTGTGCGGTCCTCTTGTTTGGCTGTGCGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CAA 90 bp ATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAGTCTAGCTTTTAGCAAAACCAGCCCATaGAGAACGCCGAGGATGGTG +
Preference number: 5 (lower is better)
Translates to: MAANDHKRCRRHEESLAFSKTSP*RTPRMV
Trigger: CACCATCCTCGGCGTTCTCAATGGGCTGGTTTTGCT...AAAAGCTAGACTCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CAA 90 bp AAGAGCACTAATGACGGGGAGGATGGAGACAATGTTTGGATTTACTTAGGAAGCGGGCCACATCCACTCTaGAATTTGGGGGTGTTGGGG +
Preference number: 5 (lower is better)
Translates to: KSTNDGEDGDNVWIYLGSGPHPL*NLGVLG
Trigger: CCCCAACACCCCCAAATTCAAGAGTGGATGTGGCCC...GCTTCCTAAGTAAATCCAAACATTGTCTCCATCCTCCCCGTCATTAGTGCTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CAA 90 bp ATGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACGGAGGTTTACCTCTGTaGTACATGTATACATGGACA +
Preference number: 5 (lower is better)
Translates to: MAQPRLSTRHVTEFSNTHGGLPL*YMYTWT
Trigger: TGTCCATGTATACATGTACAACAGAGGTAAACCTCC...GTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CAA 90 bp GGCCGCAGCACCATGGCAGAGGAGGAGAGTGCAGAAGTAGTTCTGCTTTCCCACACTATCTTTTACTTATaGGTGATTCTGGCCTTAGAG +
Preference number: 5 (lower is better)
Translates to: GRSTMAEEESAEVVLLSHTIFYL*VILALE
Trigger: CTCTAAGGCCAGAATCACCAATAAGTAAAAGATAGT...GTGGGAAAGCAGAACTACTTCTGCACTCTCCTCCTCTGCCATGGTGCTGCGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CAA 90 bp AGGATGGTGAGGATCGCCAGCACAGCAAAGAAATACCTGGGAGATCAAGAGGAATCTGCTTTCCCACCATaGAGGGCTAAGGTCTGGAAT +
Preference number: 5 (lower is better)
Translates to: RMVRIASTAKKYLGDQEESAFPP*RAKVWN
Trigger: ATTCCAGACCTTAGCCCTCAATGGTGGGAAAGCAGA...TTCCTCTTGATCTCCCAGGTATTTCTTTGCTGTGCTGGCGATCCTCACCATCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CAA 90 bp TGGAGTGCCGAGTCCAGGTGTTGTAGGAGCGCTTCTGTGGTCAGGACATTAGCAAATTTCCACTGCCTGTaGTACATGTATACATGGACA +
Preference number: 5 (lower is better)
Translates to: WSAESRCCRSASVVRTLANFHCL*YMYTWT
Trigger: TGTCCATGTATACATGTACAACAGGCAGTGGAAATT...TGCTAATGTCCTGACCACAGAAGCGCTCCTACAACACCTGGACTCGGCACTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551623.1
CDS-3UTR CAA 90 bp AGCACAGCAAAGAAATACCTGGGAGATCAAGAGGAAACGGGAACACGCGCTGTGTGCTCGTACATTTGCTaGGGAGTCATTAACTGGAAC +
Preference number: 5 (lower is better)
Translates to: STAKKYLGDQEETGTRAVCSYIC*GVINWN
Trigger: GTTCCAGTTAATGACTCCCAAGCAAATGTACGAGCA...CACAGCGCGTGTTCCCGTTTCCTCTTGATCTCCCAGGTATTTCTTTGCTGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CAA 90 bp ATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATTGGGGTCCTGGATGGCATGCTCGTACATTTGCTaGGGAGTCATTAACTGGAAC +
Preference number: 5 (lower is better)
Translates to: IREKEIIPLKHKLGSWMACSYIC*GVINWN
Trigger: GTTCCAGTTAATGACTCCCAAGCAAATGTACGAGCA...TGCCATCCAGGACCCCAATTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CAA 90 bp TGGGGTCCTGGATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGATCCTTACTTTTTCAATaGCCTCCACAAAGTCTGAGG +
Preference number: 5 (lower is better)
Translates to: WGPGWQPMIIRDAVDTRRSLLFQ*PPQSLR
Trigger: CCTCAGACTTTGTGGAGGCAATTGAAAAAGTAAGGA...TCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCATCCAGGACCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CAA 90 bp ATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATTGGGGTCCTGGATGGCATTTTGCCGGGCTGATTaGAAAGGATTAGGTGGATGT +
Preference number: 5 (lower is better)
Translates to: IREKEIIPLKHKLGSWMAFCRAD*KGLGGC
Trigger: ACATCCACCTAATCCTTTCAAATCAGCCCGGCAAAA...TGCCATCCAGGACCCCAATTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CAA 90 bp TGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCCTTCTGTCAAAAGACTaGATGACTACTATGTACACT +
Preference number: 5 (lower is better)
Translates to: WPSQGSALGMSPNSLTPTLLSKD*MTTMYT
Trigger: AGTGTACATAGTAGTCATCAAGTCTTTTGACAGAAG...GGTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000430669.6
CDS-3UTR CAA 90 bp AAGAGCACTAATGACGGGGAGGATGGAGACAATGTTTGGATTTACTTAGGAAGCCTAGCTCCATGGACATaGCAGGGAGGTAGCTGGAGA +
Preference number: 5 (lower is better)
Translates to: KSTNDGEDGDNVWIYLGSLAPWT*QGGSWR
Trigger: TCTCCAGCTACCTCCCTGCAATGTCCATGGAGCTAG...GCTTCCTAAGTAAATCCAAACATTGTCTCCATCCTCCCCGTCATTAGTGCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS GCA 90 bp TCCTCGTTCCAGTTGATGTGTGAGACATACTCGTACCCCTTGAAGTaGTCGTACATTTGCTTGGGAGTCATTAACTGGAACATGGTCTGC +
Preference number: 5 (lower is better)
Translates to: SSFQLMCETYSYPLK*SYICLGVINWNMVC
Trigger: GCAGACCATGTTCCAGTTAATGACTCCCAAGCAAATGTACGAGCACTTCAAGGGGTACGAGTATGTCTCACACATCAACTGGAACGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331920.11
ENST00000375271.4
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
ENST00000437951.6
CDS GCA 90 bp CCACAGGGATGCCACTTCACATTCTGCAAAACTGTACCAGGTAGTTaGTTCCCTACAATACTTGTTACAGACCAACAGGGCAAGTTTGCC +
Preference number: 5 (lower is better)
Translates to: PQGCHFTFCKTVPGS*FPTILVTDQQGKFA
Trigger: GGCAAACTTGCCCTGTTGGTCTGTAACAAGTATTGTAGGGAAGCAACTACCTGGTACAGTTTTGCAGAATGTGAAGTGGCATCCCTGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550136.1
CDS-3UTR CAA 90 bp TACCTAGGAGGTATGCTGTCCCAGACTGTAATTTCGCCCCTTCCCAGAAGCAGTGGTCTGTATCATGAGTaGAGGATTAAACATAGCCTC +
Preference number: 5 (lower is better)
Translates to: YLGGMLSQTVISPLPRSSGLYHE*RIKHSL
Trigger: GAGGCTATGTTTAATCCTCAACTCATGATACAGACC...ACTGCTTCTGGGAAGGGGCGAAATTACAGTCTGGGACAGCATACCTCCTAGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550914.6
CDS-3UTR CAA 90 bp CACATCGGTGTGAGAAGCGCTGGTCTACAGCGATTCCACTTCACCATTCACTCTTATCAAGAGGTTTGGTaGAATTTTTGTTGGGGGCTG +
Preference number: 5 (lower is better)
Translates to: HIGVRSAGLQRFHFTIHSYQEVW*NFCWGL
Trigger: CAGCCCCCAACAAAAATTCAACCAAACCTCTTGATA...AGAGTGAATGGTGAAGTGGAATCGCTGTAGACCAGCGCTTCTCACACCGATGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CAA 90 bp ATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATTGGGGTCCTGGATGGCATATCAAGAGGTTTGGTaGAATTTTTGTTGGGGGCTG +
Preference number: 5 (lower is better)
Translates to: IREKEIIPLKHKLGSWMAYQEVW*NFCWGL
Trigger: CAGCCCCCAACAAAAATTCAACCAAACCTCTTGATA...TGCCATCCAGGACCCCAATTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CAA 90 bp CCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATTGTCCTCGTTCCAGTaGATGTGTGAGACATACTCG +
Preference number: 5 (lower is better)
Translates to: PASITMIREKEIIPLKHKLSSFQ*MCETYS
Trigger: CGAGTATGTCTCACACATCAACTGGAACGAGGACAA...TTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CAA 90 bp TCCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAGGGGGTTTCCAATCTTaGGCCTCTTTGCTTCAGATT +
Preference number: 5 (lower is better)
Translates to: SSIHHNDPREGDYPPEAQGGFQS*ASLLQI
Trigger: AATCTGAAGCAAAGAGGCCAAAGATTGGAAACCCCC...TTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CAA 90 bp ATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATTGGGGTCCTGGATGGCAGGATGGAGACAATGTTaGGATTTACTTAGGAAGCAC +
Preference number: 5 (lower is better)
Translates to: IREKEIIPLKHKLGSWMAGWRQC*DLLRKH
Trigger: GTGCTTCCTAAGTAAATCCAAACATTGTCTCCATCC...TGCCATCCAGGACCCCAATTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CAA 90 bp ATGGCCCAGCCAAGGCTCAGCACTAGGCATGTCACCGAATTCTCTAACACCCACCTTCTGTCAAAAGACTaGATGACTACTATGTACACT +
Preference number: 5 (lower is better)
Translates to: MAQPRLSTRHVTEFSNTHLLSKD*MTTMYT
Trigger: AGTGTACATAGTAGTCATCAAGTCTTTTGACAGAAG...GTGGGTGTTAGAGAATTCGGTGACATGCCTAGTGCTGAGCCTTGGCTGGGCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000430669.6
CDS-3UTR CAA 90 bp CCAGGCTCGTATAGTTGCTGCAGATGGTCCTTACTTTTTCAATTGCCTCCACAACTAAAACATGTCTCCTaGCACACGCCTGCTTACCTG +
Preference number: 5 (lower is better)
Translates to: PGSYSCCRWSLLFQLPPQLKHVS*HTPAYL
Trigger: CAGGTAAGCAGGCGTGTGCAAGGAGACATGTTTTAG...TTGTGGAGGCAATTGAAAAAGTAAGGACCATCTGCAGCAACTATACGAGCCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CAA 90 bp CACATCGGTGTGAGAAGCGCTGGTCTACAGCGATTCCACTTCACCATTCACTCTGCTCTAGAAGAGAGCTaGTCTTTATACCTCCGAATA +
Preference number: 5 (lower is better)
Translates to: HIGVRSAGLQRFHFTIHSALEES*SLYLRI
Trigger: TATTCGGAGGTATAAAGACAAGCTCTCTTCTAGAGC...AGAGTGAATGGTGAAGTGGAATCGCTGTAGACCAGCGCTTCTCACACCGATGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CAA 90 bp AGCACAGCAAAGAAATACCTGGGAGATCAAGAGGAAACGGGAACACGCGCTGTGTGTCTGCTCATTTATTaGACCTTGGTGAGGCCTTTA +
Preference number: 5 (lower is better)
Translates to: STAKKYLGDQEETGTRAVCLLIY*TLVRPL
Trigger: TAAAGGCCTCACCAAGGTCAAATAAATGAGCAGACA...CACAGCGCGTGTTCCCGTTTCCTCTTGATCTCCCAGGTATTTCTTTGCTGTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CAA 90 bp ATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATTGGGGTCCTGGATGGCAAATTTCCACTGCCTGTaGTACATGTATACATGGACA +
Preference number: 5 (lower is better)
Translates to: IREKEIIPLKHKLGSWMANFHCL*YMYTWT
Trigger: TGTCCATGTATACATGTACAACAGGCAGTGGAAATT...TGCCATCCAGGACCCCAATTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331920.11
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CAA 90 bp CCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATGCTCGTACATTTGCTaGGGAGTCATTAACTGGAAC +
Preference number: 5 (lower is better)
Translates to: PASITMIREKEIIPLKHKCSYIC*GVINWN
Trigger: GTTCCAGTTAATGACTCCCAAGCAAATGTACGAGCA...TTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CAA 90 bp ATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAGTCTAGCTTTTACATACTCGTACCCCTaGAAGTGCTCGTACATTTGC +
Preference number: 5 (lower is better)
Translates to: MAANDHKRCRRHEESLAFTYSYP*KCSYIC
Trigger: GCAAATGTACGAGCACTTCAAGGGGTACGAGTATGT...AAAAGCTAGACTCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CAA 90 bp TCCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAAGAACCATGGCAAAATaGAACACCACTACTACCGCT +
Preference number: 5 (lower is better)
Translates to: SSIHHNDPREGDYPPEAQRTMAK*NTTTTA
Trigger: AGCGGTAGTAGTGGTGTTCAATTTTGCCATGGTTCT...TTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CAA 90 bp ATGATGCCATCTGCATCCACCAGACGCTGTTTAGTCAACTGGCTGATGTCGATGGGATGGAGACAATGTTaGGATTTACTTAGGAAGCAC +
Preference number: 5 (lower is better)
Translates to: MMPSASTRRCLVNWLMSMGWRQC*DLLRKH
Trigger: GTGCTTCCTAAGTAAATCCAAACATTGTCTCCATCC...CATCGACATCAGCCAGTTGACTAAACAGCGTCTGGTGGATGCAGATGGCATCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CAA 90 bp TCCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAGGTCTGTATCATGAGTaGAGGATTAAACATAGCCTC +
Preference number: 5 (lower is better)
Translates to: SSIHHNDPREGDYPPEAQGLYHE*RIKHSL
Trigger: GAGGCTATGTTTAATCCTCAACTCATGATACAGACC...TTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CAA 90 bp GAGCGCTTCTGTGGTCAGGACATTAGCACCTTCTTCTTTAGGGGTCTGTATCATGGTCTGTATCATGAGTaGAGGATTAAACATAGCCTC +
Preference number: 5 (lower is better)
Translates to: ERFCGQDISTFFFRGLYHGLYHE*RIKHSL
Trigger: GAGGCTATGTTTAATCCTCAACTCATGATACAGACC...ATGATACAGACCCCTAAAGAAGAAGGTGCTAATGTCCTGACCACAGAAGCGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551623.1
CDS-3UTR CAA 90 bp AAGAGCACTAATGACGGGGAGGATGGAGACAATGTTTGGATTTACTTAGGAAGCCCACTACCTTGGCTTTaGGTTTCAAGAGGAAAGGAG +
Preference number: 5 (lower is better)
Translates to: KSTNDGEDGDNVWIYLGSPLPWL*VSRGKE
Trigger: CTCCTTTCCTCTTGAAACCAAAAGCCAAGGTAGTGG...GCTTCCTAAGTAAATCCAAACATTGTCTCCATCCTCCCCGTCATTAGTGCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CAA 90 bp ATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAGTCTAGCTTTTAAGATCACCACTACCTaGGCTTTTGGTTTCAAGAGG +
Preference number: 5 (lower is better)
Translates to: MAANDHKRCRRHEESLAFKITTT*AFGFKR
Trigger: CCTCTTGAAACCAAAAGCCAAGGTAGTGGTGATCTT...AAAAGCTAGACTCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CAA 90 bp TCCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAATCCTTACTTTTTCAATaGCCTCCACAAAGTCTGAGG +
Preference number: 5 (lower is better)
Translates to: SSIHHNDPREGDYPPEAQSLLFQ*PPQSLR
Trigger: CCTCAGACTTTGTGGAGGCAATTGAAAAAGTAAGGA...TTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CAA 90 bp CCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAATCCTTACTTTTTCAATaGCCTCCACAAAGTCTGAGG +
Preference number: 5 (lower is better)
Translates to: PASITMIREKEIIPLKHKSLLFQ*PPQSLR
Trigger: CCTCAGACTTTGTGGAGGCAATTGAAAAAGTAAGGA...TTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CAA 90 bp AAGAGCACTAATGACGGGGAGGATGGAGACAATGTTTGGATTTACTTAGGAAGCGGGGGTTTCCAATCTTaGGCCTCTTTGCTTCAGATT +
Preference number: 5 (lower is better)
Translates to: KSTNDGEDGDNVWIYLGSGGFQS*ASLLQI
Trigger: AATCTGAAGCAAAGAGGCCAAAGATTGGAAACCCCC...GCTTCCTAAGTAAATCCAAACATTGTCTCCATCCTCCCCGTCATTAGTGCTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CAA 90 bp ACAGCGATTCCACTTCACCATTCACTCTATGCAAAAACTACAATAAGCAAGCTTGCTGCAGAGTTGTCTTaGCTGCCAGCCCCAAATCCT +
Preference number: 5 (lower is better)
Translates to: TAIPLHHSLYAKTTISKLAAELS*LPAPNP
Trigger: AGGATTTGGGGCTGGCAGCAAAGACAACTCTGCAGC...AAGCTTGCTTATTGTAGTTTTTGCATAGAGTGAATGGTGAAGTGGAATCGCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CAA 90 bp ATGATGCCATCTGCATCCACCAGACGCTGTTTAGTCAACTGGCTGATGTCGATGCTTTACCTTATGACTTaGAGGACTACATTCCACAAC +
Preference number: 5 (lower is better)
Translates to: MMPSASTRRCLVNWLMSMLYLMT*RTTFHN
Trigger: GTTGTGGAATGTAGTCCTCAAAGTCATAAGGTAAAG...CATCGACATCAGCCAGTTGACTAAACAGCGTCTGGTGGATGCAGATGGCATCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CAA 90 bp ATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAGTCTAGCTTTTGGTCTGTATCATGAGTaGAGGATTAAACATAGCCTC +
Preference number: 5 (lower is better)
Translates to: MAANDHKRCRRHEESLAFGLYHE*RIKHSL
Trigger: GAGGCTATGTTTAATCCTCAACTCATGATACAGACC...AAAAGCTAGACTCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CAA 90 bp CCAGCATCCATCACAATGATCCGAGAGAAGGAGATTATCCCCCTGAAGCACAAAAATTTCCACTGCCTGTaGTACATGTATACATGGACA +
Preference number: 5 (lower is better)
Translates to: PASITMIREKEIIPLKHKNFHCL*YMYTWT
Trigger: TGTCCATGTATACATGTACAACAGGCAGTGGAAATT...TTTGTGCTTCAGGGGGATAATCTCCTTCTCTCGGATCATTGTGATGGATGCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000331920.11
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CAA 90 bp ATGGCAGCCAATGATCATAAGAGATGCCGTAGACACGAGGAGAGTCTAGCTTTTGCCATATCAAGAGGTTaGGTTGAATTTTTGTTGGGG +
Preference number: 5 (lower is better)
Translates to: MAANDHKRCRRHEESLAFAISRG*VEFLLG
Trigger: CCCCAACAAAAATTCAACCAAACCTCTTGATATGGC...AAAAGCTAGACTCTCCTCGTGTCTACGGCATCTCTTATGATCATTGGCTGCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CAA 90 bp AAGAGCACTAATGACGGGGAGGATGGAGACAATGTTTGGATTTACTTAGGAAGCAGAACCATGGCAAAATaGAACACCACTACTACCGCT +
Preference number: 5 (lower is better)
Translates to: KSTNDGEDGDNVWIYLGSRTMAK*NTTTTA
Trigger: AGCGGTAGTAGTGGTGTTCAATTTTGCCATGGTTCT...GCTTCCTAAGTAAATCCAAACATTGTCTCCATCCTCCCCGTCATTAGTGCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS-3UTR CAA 90 bp AAAGACTGGCAAATATTGGTAAAAGGTGGTGCTGTTTGTGTCCTTGTGGCGCTGGGATGGAGACAATGTTaGGATTTACTTAGGAAGCAC +
Preference number: 5 (lower is better)
Translates to: KDWQILVKGGAVCVLVALGWRQC*DLLRKH
Trigger: GTGCTTCCTAAGTAAATCCAAACATTGTCTCCATCC...CAGCGCCACAAGGACACAAACAGCACCACCTTTTACCAATATTTGCCAGTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430669.6
CDS-3UTR CAA 90 bp AAGAGCACTAATGACGGGGAGGATGGAGACAATGTTTGGATTTACTTAGGAAGCTGGGCAACTCTCTACTaGGTATTGGCAAACAGGAAT +
Preference number: 5 (lower is better)
Translates to: KSTNDGEDGDNVWIYLGSWATLY*VLANRN
Trigger: ATTCCTGTTTGCCAATACCAAGTAGAGAGTTGCCCA...GCTTCCTAAGTAAATCCAAACATTGTCTCCATCCTCCCCGTCATTAGTGCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS-3UTR CAA 90 bp AAGAGCACTAATGACGGGGAGGATGGAGACAATGTTTGGATTTACTTAGGAAGCGGTCTGTATCATGAGTaGAGGATTAAACATAGCCTC +
Preference number: 5 (lower is better)
Translates to: KSTNDGEDGDNVWIYLGSGLYHE*RIKHSL
Trigger: GAGGCTATGTTTAATCCTCAACTCATGATACAGACC...GCTTCCTAAGTAAATCCAAACATTGTCTCCATCCTCCCCGTCATTAGTGCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
CDS TCA 90 bp CTCTGCTCCACACTGGAAAGGCAGGATGTGTACTTTTTACTCTTGTaGAGTCCAATTATGCATCTCAAGGGGAAAGTCTTCATTTACTGT +
Preference number: 5 (lower is better)
Translates to: LCSTLERQDVYFLLL*SPIMHLKGKVFIYC
Trigger: ACAGTAAATGAAGACTTTCCCCTTGAGATGCATAATTGGACTTCACAAGAGTAAAAAGTACACATCCTGCCTTTCCAGTGTGGAGCAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546744.5
CDS TCA 90 bp TTGTGCATTAGAAAAATGAATGGGCTTGAAGCCAGAAAAAGGCTTTaGAACCTGGCTCTCTCATTTCATAACTGCATGAACTTGGACAAA +
Preference number: 5 (lower is better)
Translates to: LCIRKMNGLEARKRL*NLALSFHNCMNLDK
Trigger: TTTGTCCAAGTTCATGCAGTTATGAAATGAGAGAGCCAGGTTTCAAAGCCTTTTTCTGGCTTCAAGCCCATTCATTTTTCTAATGCACAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000550136.1
CDS GCA 72 bp CAGGCGCTCCCCTCCCCGCCTTCCTGGGAGGCGCCCTaGCCGGCGAGCTCCCGCGAGCCTAGCCACCCTCTC +
Preference number: 6 (lower is better)
Translates to: QALPSPPSWEAP*PASSREPSHPL
Trigger: GAGAGGGTGGCTAGGCTCGCGGGAGCTCGCCGGGCAGGGCGCCTCCCAGGAAGGCGGGGAGGGGAGCGCCTG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430669.6
ENST00000468211.6
CDS GCA 72 bp CCGAGTGCAAAGGGAAGGGCTCAGGCCGGCGCAGGCTaGTCCCCGGCGCGGCATTTCCCCGGCGCTGGCCGC +
Preference number: 6 (lower is better)
Translates to: PSAKGRAQAGAG*SPARHFPGAGR
Trigger: GCGGCCAGCGCCGGGGAAATGCCGCGCCGGGGAGCAGCCTGCGCCGGCCTGAGCCCTTCCCTTTGCACTCGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429896.6
CDS GCA 72 bp TGCTCCTCGGCAACCCGCTGGACCATTCTGTCCCCGTaGAGCGCGCCTCTCTCGCTCCCGGGACCTGGGGAC +
Preference number: 6 (lower is better)
Translates to: CSSATRWTILSP*SAPLSLPGPGD
Trigger: GTCCCCAGGTCCCGGGAGCGAGAGAGGCGCGCTGCACGGGGACAGAATGGTCCAGCGGGTTGCCGAGGAGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331920.11
CDS GCA 72 bp TCGCTCCCGGGACCTGGGGACTCCGCTCTGTGTGTGTaGAGCGGGCAGCGGCCGCAGCAGCTCCTTGATTCA +
Preference number: 6 (lower is better)
Translates to: SLPGPGDSALCV*SGQRPQQLLDS
Trigger: TGAATCAAGGAGCTGCTGCGGCCGCTGCCCGCTGCACACACACAGAGCGGAGTCCCCAGGTCCCGGGAGCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331920.11
CDS CCA 72 bp AAATCTGCTCCAGAGCGAAGGCGGCGTCGCAGTAGCTaGGCCGGTGCAGATAGTCCCGGTCCGGCGCGGCAG +
Preference number: 6 (lower is better)
Translates to: KSAPERRRRRSS*AGADSPGPARQ
Trigger: CTGCCGCGCCGGACCGGGACTATCTGCACCGGCCCAGCTACTGCGACGCCGCCTTCGCTCTGGAGCAGATTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331920.11
CDS CAA 90 bp GGCTGCTGGGTTCGCGGTGGCTGCTCGGTCCCGGACTCTGCTTTCTaGTGCTCCTCGGCAACCCGCTGGACCATTCTGTCCCCGTGCAGC +
Preference number: 6 (lower is better)
Translates to: GCWVRGGCSVPDSAF*CSSATRWTILSPCS
Trigger: GCTGCACGGGGACAGAATGGTCCAGCGGGTTGCCGAGGAGCACAAGAAAGCAGAGTCCGGGACCGAGCAGCCACCGCGAACCCAGCAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331920.11
CDS GCA 72 bp CGCGGTGGCTGCTCGGTCCCGGACTCTGCTTTCTTGTaGTCCTCGGCAACCCGCTGGACCATTCTGTCCCCG +
Preference number: 6 (lower is better)
Translates to: RGGCSVPDSAFL*SSATRWTILSP
Trigger: CGGGGACAGAATGGTCCAGCGGGTTGCCGAGGAGCACAAGAAAGCAGAGTCCGGGACCGAGCAGCCACCGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331920.11
CDS GCA 72 bp AATCAGGTCAGCCCGGCACTCTGCCCACGCTGGACCTaGTGCCTGTCGCAGCTCCCACCAGCTCCCAAGGAG +
Preference number: 6 (lower is better)
Translates to: NQVSPALCPRWT*CLSQLPPAPKE
Trigger: CTCCTTGGGAGCTGGTGGGAGCTGCGACAGGCAGCAGGTCCAGCGTGGGCAGAGTGCCGGGCTGACCTGATT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553256.5
CDS CCA 72 bp CCGGCCGTCAACCCCTGCTCGGAGCGCGGGTGCCGATaGCGCGGACGCTGGGCTTGGATTTCACATCAATTC +
Preference number: 6 (lower is better)
Translates to: PAVNPCSERGCR*RGRWAWISHQF
Trigger: GAATTGATGTGAAATCCAAGCCCAGCGTCCGCGCCATCGGCACCCGCGCTCCGAGCAGGGGTTGACGGCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430669.6
ENST00000468211.6
ENST00000551425.1
CDS GCA 72 bp CTGCTGGGTTCGCGGTGGCTGCTCGGTCCCGGACTCTaGTTTCTTGTGCTCCTCGGCAACCCGCTGGACCAT +
Preference number: 6 (lower is better)
Translates to: LLGSRWLLGPGL*FLVLLGNPLDH
Trigger: ATGGTCCAGCGGGTTGCCGAGGAGCACAAGAAAGCAGAGTCCGGGACCGAGCAGCCACCGCGAACCCAGCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331920.11
CDS GCA 72 bp CCCGGCGCGCTGGGCCGCCGGAGGCTTTCGGCGGAGTaGAGCGCGGACTCACAATTACAAGCCTGTTTCTAT +
Preference number: 6 (lower is better)
Translates to: PGALGRRRLSAE*SADSQLQACFY
Trigger: ATAGAAACAGGCTTGTAATTGTGAGTCCGCGCTGCACTCCGCCGAAAGCCTCCGGCGGCCCAGCGCGCCGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430669.6
ENST00000437951.6
ENST00000468211.6
CDS CCA 72 bp CCGGACTCTGCTTTCTTGTGCTCCTCGGCAACCCGCTaGACCATTCTGTCCCCGTGCAGCGCGCCTCTCTCG +
Preference number: 6 (lower is better)
Translates to: PDSAFLCSSATR*TILSPCSAPLS
Trigger: CGAGAGAGGCGCGCTGCACGGGGACAGAATGGTCCAGCGGGTTGCCGAGGAGCACAAGAAAGCAGAGTCCGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331920.11
CDS TCA 72 bp CCCGCCGAGAATGGTAGTAAGTGGGGATCCACGTGGTaGGCGCGGCCGCCGGAGTTCACTCCCGACGCATTT +
Preference number: 6 (lower is better)
Translates to: PAENGSKWGSTW*ARPPEFTPDAF
Trigger: AAATGCGTCGGGAGTGAACTCCGGCGGCCGCGCTCACCACGTGGATCCCCACTTACTACCATTCTCGGCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553011.5
CDS GCA 72 bp ATGGAGCCCAAGGTTCAGGAGCCAGCAAACCAGTCCTaGTCTGTCCATCACCCTCGGGGACGGGCGCTAGGG +
Preference number: 6 (lower is better)
Translates to: MEPKVQEPANQS*SVHHPRGRALG
Trigger: CCCTAGCGCCCGTCCCCGAGGGTGATGGACAGAGCAGGACTGGTTTGCTGGCTCCTGAACCTTGGGCTCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553011.5
CDS CAA 72 bp GTTCGCGGTGGCTGCTCGGTCCCGGACTCTGCTTTCTaGTGCTCCTCGGCAACCCGCTGGACCATTCTGTCC +
Preference number: 6 (lower is better)
Translates to: VRGGCSVPDSAF*CSSATRWTILS
Trigger: GGACAGAATGGTCCAGCGGGTTGCCGAGGAGCACAAGAAAGCAGAGTCCGGGACCGAGCAGCCACCGCGAAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331920.11
CDS GCA 72 bp CGACTTACTCGTCCTCCAACTGCTCGCCCTGTCAGATaGAATCAGGTCAGCCCGGCACTCTGCCCACGCTGG +
Preference number: 6 (lower is better)
Translates to: RLTRPPTARPVR*NQVSPALCPRW
Trigger: CCAGCGTGGGCAGAGTGCCGGGCTGACCTGATTGCATCTGACAGGGCGAGCAGTTGGAGGACGAGTAAGTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553256.5
CDS CCA 72 bp CTAGAGCCCTGGCTGGGCAGATCTCCTGCTGAAACCTaGCGCAGCTGTCATGGGGACCGCCCACGTTTCCTT +
Preference number: 6 (lower is better)
Translates to: LEPWLGRSPAET*RSCHGDRPRFL
Trigger: AAGGAAACGTGGGCGGTCCCCATGACAGCTGCGCCAGGTTTCAGCAGGAGATCTGCCCAGCCAGGGCTCTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550136.1
CDS CAA 90 bp AGAGCGGGAATTGGGATTAACGCGGCCATGAAGAAGGCTGTGACATaGCTGATGGACGTGAGGGCCACGCTGGCTCCTGTGCGCTTCAGG +
Preference number: 6 (lower is better)
Translates to: RAGIGINAAMKKAVT*LMDVRATLAPVRFR
Trigger: CCTGAAGCGCACAGGAGCCAGCGTGGCCCTCACGTCCATCAGCAATGTCACAGCCTTCTTCATGGCCGCGTTAATCCCAATTCCCGCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331920.11
ENST00000375271.4
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
ENST00000437951.6
CDS CAA 90 bp CCACCGCAAAGGAGGTTTACCTCTTCCACCCACAGCTCCTCCACGTaGGTCTCGAGGTTCGCTGCTTTTAATCCCACCGCGAAGGCCCCA +
Preference number: 6 (lower is better)
Translates to: PPQRRFTSSTHSSST*VSRFAAFNPTAKAP
Trigger: TGGGGCCTTCGCGGTGGGATTAAAAGCAGCGAACCTCGAGACCAACGTGGAGGAGCTGTGGGTGGAAGAGGTAAACCTCCTTTGCGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000548420.1
ENST00000548945.6
CDS CAA 90 bp TCACGACTTACTCGTCCTCCAACTTCCACCCACAGCTCCTCCACGTaGGTCTCGAGGTTCGCTGCTTTTAATCCCACCGCGAAGGCCCCA +
Preference number: 6 (lower is better)
Translates to: SRLTRPPTSTHSSST*VSRFAAFNPTAKAP
Trigger: TGGGGCCTTCGCGGTGGGATTAAAAGCAGCGAACCTCGAGACCAACGTGGAGGAGCTGTGGGTGGAAGTTGGAGGACGAGTAAGTCGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
ENST00000437951.6
ENST00000468211.6
ENST00000546820.5
ENST00000547672.5
ENST00000550914.6
ENST00000551630.1
ENST00000551845.5
ENST00000553011.5
CDS GCA 72 bp TTGTCCTCCTCTTTGCCTGGCTCTAGGTCCCTTGGCTaGCCTTGTCAGTGGCACTCACCTCAGTTGGAGCTG +
Preference number: 6 (lower is better)
Translates to: LSSSLPGSRSLG*PCQWHSPQLEL
Trigger: CAGCTCCAACTGAGGTGAGTGCCACTGACAAGGGCAGCCAAGGGACCTAGAGCCAGGCAAAGAGGAGGACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430669.6
CDS CCA 72 bp CTCGTCCTCCAACTTCCACCCACAGCTCCTCCACGTTaGTCTCGAGGTTCGCTGCTTTTAATCCCACCGCGA +
Preference number: 6 (lower is better)
Translates to: LVLQLPPTAPPR*SRGSLLLIPPR
Trigger: TCGCGGTGGGATTAAAAGCAGCGAACCTCGAGACCAACGTGGAGGAGCTGTGGGTGGAAGTTGGAGGACGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
ENST00000437951.6
ENST00000468211.6
ENST00000546820.5
ENST00000547672.5
ENST00000550914.6
ENST00000551630.1
ENST00000551845.5
ENST00000553011.5
CDS CAA 72 bp ACTCGTCCTCCAACTTCCACCCACAGCTCCTCCACGTaGGTCTCGAGGTTCGCTGCTTTTAATCCCACCGCG +
Preference number: 6 (lower is better)
Translates to: TRPPTSTHSSST*VSRFAAFNPTA
Trigger: CGCGGTGGGATTAAAAGCAGCGAACCTCGAGACCAACGTGGAGGAGCTGTGGGTGGAAGTTGGAGGACGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
ENST00000437951.6
ENST00000468211.6
ENST00000546820.5
ENST00000547672.5
ENST00000550914.6
ENST00000551630.1
ENST00000551845.5
ENST00000553011.5
CDS CAA 72 bp GGCTCAGGGGAGGGTGTGGGCAGGCGGTTCAAGCCGTaGGCTGGAGACACCTATTTAAGGGGATTCCATGTT +
Preference number: 6 (lower is better)
Translates to: GSGEGVGRRFKP*AGDTYLRGFHV
Trigger: AACATGGAATCCCCTTAAATAGGTGTCTCCAGCCAACGGCTTGAACCGCCTGCCCACACCCTCCCCTGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546744.5
CDS CCA 72 bp GGAGGTTTACCTCTTCCACCCACAGCTCCTCCACGTTaGTCTCGAGGTTCGCTGCTTTTAATCCCACCGCGA +
Preference number: 6 (lower is better)
Translates to: GGLPLPPTAPPR*SRGSLLLIPPR
Trigger: TCGCGGTGGGATTAAAAGCAGCGAACCTCGAGACCAACGTGGAGGAGCTGTGGGTGGAAGAGGTAAACCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548420.1
ENST00000548945.6
CDS CCA 72 bp CGGCACAGGAAACACAGCATTCAGCCGGCCTACACGTaGGACATCCCCGTGTCACTACTGACCTCAGGATAT +
Preference number: 6 (lower is better)
Translates to: RHRKHSIQPAYT*DIPVSLLTSGY
Trigger: ATATCCTGAGGTCAGTAGTGACACGGGGATGTCCCACGTGTAGGCCGGCTGAATGCTGTGTTTCCTGTGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546744.5
CDS CAA 72 bp ATTGGGATTAACGCGGCCATGAAGAAGGCTGTGACATaGCTGATGGACGTGAGGGCCACGCTGGCTCCTGTG +
Preference number: 6 (lower is better)
Translates to: IGINAAMKKAVT*LMDVRATLAPV
Trigger: CACAGGAGCCAGCGTGGCCCTCACGTCCATCAGCAATGTCACAGCCTTCTTCATGGCCGCGTTAATCCCAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331920.11
ENST00000375271.4
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
ENST00000437951.6
CDS CAA 72 bp AGGAGGTTTACCTCTTCCACCCACAGCTCCTCCACGTaGGTCTCGAGGTTCGCTGCTTTTAATCCCACCGCG +
Preference number: 6 (lower is better)
Translates to: RRFTSSTHSSST*VSRFAAFNPTA
Trigger: CGCGGTGGGATTAAAAGCAGCGAACCTCGAGACCAACGTGGAGGAGCTGTGGGTGGAAGAGGTAAACCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548420.1
ENST00000548945.6
CDS CAA 90 bp ACCTCCACATATGTCCTCTGCCAGGCCTCCAGGATGGCTGCCGCTTaGTCCTCGTTCCAGTTGATGTGTGAGACATACTCGTACCCCTTG +
Preference number: 6 (lower is better)
Translates to: TSTYVLCQASRMAAA*SSFQLMCETYSYPL
Trigger: CAAGGGGTACGAGTATGTCTCACACATCAACTGGAACGAGGACAAAGCGGCAGCCATCCTGGAGGCCTGGCAGAGGACATATGTGGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331920.11
ENST00000375271.4
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
ENST00000437951.6
CDS TCA 72 bp CACCACAGGGTATCATTAAAGGAGAGTCGGCCTCGATaGGCCATCAGTATGTACTGGAGGGAGAACGCCCGC +
Preference number: 6 (lower is better)
Translates to: HHRVSLKESRPR*AISMYWRENAR
Trigger: GCGGGCGTTCTCCCTCCAGTACATACTGATGGCTCATCGAGGCCGACTCTCCTTTAATGATACCCTGTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS CCA 72 bp CCTCTGTTGTACATGTATACATGGACACGGCTGGCCTaGAGTGCCGAGTCCAGGTGTTGTAGGAGCGCTTCT +
Preference number: 6 (lower is better)
Translates to: PLLYMYTWTRLA*SAESRCCRSAS
Trigger: AGAAGCGCTCCTACAACACCTGGACTCGGCACTCCAGGCCAGCCGTGTCCATGTATACATGTACAACAGAGG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS CAA 72 bp GCCTCCAGGATGGCTGCCGCTTTGTCCTCGTTCCAGTaGATGTGTGAGACATACTCGTACCCCTTGAAGTGC +
Preference number: 6 (lower is better)
Translates to: ASRMAAALSSFQ*MCETYSYPLKC
Trigger: GCACTTCAAGGGGTACGAGTATGTCTCACACATCAACTGGAACGAGGACAAAGCGGCAGCCATCCTGGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331920.11
ENST00000375271.4
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
ENST00000437951.6
CDS CAA 72 bp TATGTCCTCTGCCAGGCCTCCAGGATGGCTGCCGCTTaGTCCTCGTTCCAGTTGATGTGTGAGACATACTCG +
Preference number: 6 (lower is better)
Translates to: YVLCQASRMAAA*SSFQLMCETYS
Trigger: CGAGTATGTCTCACACATCAACTGGAACGAGGACAAAGCGGCAGCCATCCTGGAGGCCTGGCAGAGGACATA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331920.11
ENST00000375271.4
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
ENST00000437951.6
CDS CAA 90 bp CTCTGCCAGGCCTCCAGGATGGCTGCCGCTTTGTCCTCGTTCCAGTaGATGTGTGAGACATACTCGTACCCCTTGAAGTGCTCGTACATT +
Preference number: 6 (lower is better)
Translates to: LCQASRMAAALSSFQ*MCETYSYPLKCSYI
Trigger: AATGTACGAGCACTTCAAGGGGTACGAGTATGTCTCACACATCAACTGGAACGAGGACAAAGCGGCAGCCATCCTGGAGGCCTGGCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331920.11
ENST00000375271.4
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
ENST00000437951.6
CDS CCA 72 bp GTTTACCTCTGTTGTACATGTATACATGGACACGGCTaGCCTGGAGTGCCGAGTCCAGGTGTTGTAGGAGCG +
Preference number: 6 (lower is better)
Translates to: VYLCCTCIHGHG*PGVPSPGVVGA
Trigger: CGCTCCTACAACACCTGGACTCGGCACTCCAGGCCAGCCGTGTCCATGTATACATGTACAACAGAGGTAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS CCA 72 bp CGCAAAGGAGGTTTACCTCTGTTGTACATGTATACATaGACACGGCTGGCCTGGAGTGCCGAGTCCAGGTGT +
Preference number: 6 (lower is better)
Translates to: RKGGLPLLYMYT*TRLAWSAESRC
Trigger: ACACCTGGACTCGGCACTCCAGGCCAGCCGTGTCCATGTATACATGTACAACAGAGGTAAACCTCCTTTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS CCA 72 bp TCACTGTTGTACATGTATACATGGACACGGCTGGCCTaGAGTGCCGAGTCCAGGTGTTGTAGGAGCGCTTCT +
Preference number: 6 (lower is better)
Translates to: SLLYMYTWTRLA*SAESRCCRSAS
Trigger: AGAAGCGCTCCTACAACACCTGGACTCGGCACTCCAGGCCAGCCGTGTCCATGTATACATGTACAACAGTGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550914.6
CDS TCA 72 bp TCGCTGCTTTTAATCCCACCGCGAAGGCCCCAAATATaGGGAGGCCCACAACCAAGAACTTGCCGCAGTTTT +
Preference number: 6 (lower is better)
Translates to: SLLLIPPRRPQI*GGPQPRTCRSF
Trigger: AAAACTGCGGCAAGTTCTTGGTTGTGGGCCTCCTCATATTTGGGGCCTTCGCGGTGGGATTAAAAGCAGCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000331920.11
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
ENST00000437951.6
ENST00000468211.6
ENST00000546820.5
ENST00000547672.5
ENST00000548420.1
ENST00000548945.6
ENST00000550914.6
ENST00000551630.1
ENST00000551845.5
ENST00000553011.5
CDS TCA 72 bp AGCCGGCCTACACGTGGGACATCCCCGTGTCACTACTaGCCTCAGGATATGGTCCAAAGAAAGACAAAAGCA +
Preference number: 6 (lower is better)
Translates to: SRPTRGTSPCHY*PQDMVQRKTKA
Trigger: TGCTTTTGTCTTTCTTTGGACCATATCCTGAGGTCAGTAGTGACACGGGGATGTCCCACGTGTAGGCCGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546744.5
CDS CCA 72 bp ATTTCTCACTGTTGTACATGTATACATGGACACGGCTaGCCTGGAGTGCCGAGTCCAGGTGTTGTAGGAGCG +
Preference number: 6 (lower is better)
Translates to: ISHCCTCIHGHG*PGVPSPGVVGA
Trigger: CGCTCCTACAACACCTGGACTCGGCACTCCAGGCCAGCCGTGTCCATGTATACATGTACAACAGTGAGAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550914.6
CDS CAA 90 bp ATGTGTGAGACATACTCGTACCCCTTGAAGTGCTCGTACATTTGCTaGGGAGTCATTAACTGGAACATGGTCTGCAGGGCATGGGCGCTG +
Preference number: 6 (lower is better)
Translates to: MCETYSYPLKCSYIC*GVINWNMVCRAWAL
Trigger: CAGCGCCCATGCCCTGCAGACCATGTTCCAGTTAATGACTCCCAAGCAAATGTACGAGCACTTCAAGGGGTACGAGTATGTCTCACACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331920.11
ENST00000375271.4
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
ENST00000437951.6
CDS CAA 90 bp TCCATGCTGAGAATTGCAGGAAAAATGAGCAGAACCATGGCAAAATaGAACACCACTACTACCGCTGCCTGGAGGGAGAACGCCCGCAGA +
Preference number: 6 (lower is better)
Translates to: SMLRIAGKMSRTMAK*NTTTTAAWRENARR
Trigger: TCTGCGGGCGTTCTCCCTCCAGGCAGCGGTAGTAGTGGTGTTCAATTTTGCCATGGTTCTGCTCATTTTTCCTGCAATTCTCAGCATGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000331920.11
ENST00000375271.4
ENST00000429896.6
ENST00000430669.6
ENST00000437951.6
CDS TCA 72 bp GATGGCTGCCGCTTTGTCCTCGTTCCAGTTGATGTGTaGGACATACTCGTACCCCTTGAAGTGCTCGTACAT +
Preference number: 6 (lower is better)
Translates to: DGCRFVLVPVDV*DILVPLEVLVH
Trigger: ATGTACGAGCACTTCAAGGGGTACGAGTATGTCTCACACATCAACTGGAACGAGGACAAAGCGGCAGCCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331920.11
ENST00000375271.4
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
ENST00000437951.6
CDS TCA 72 bp AGAAGGATTTCAGGATGTCGTCCAGGGTCGTGGTGGTaGAGGAAAGCACCTTTTGAGTGGAGTTCTGTGCGA +
Preference number: 6 (lower is better)
Translates to: RRISGCRPGSWW*RKAPFEWSSVR
Trigger: TCGCACAGAACTCCACTCAAAAGGTGCTTTCCTTCACCACCACGACCCTGGACGACATCCTGAAATCCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331920.11
ENST00000375271.4
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
ENST00000437951.6
CDS GCA 72 bp TACATTTGCTTGGGAGTCATTAACTGGAACATGGTCTaGAGGGCATGGGCGCTGACGAGTTTTCCAGTGCTG +
Preference number: 6 (lower is better)
Translates to: YICLGVINWNMV*RAWALTSFPVL
Trigger: CAGCACTGGAAAACTCGTCAGCGCCCATGCCCTGCAGACCATGTTCCAGTTAATGACTCCCAAGCAAATGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331920.11
ENST00000375271.4
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
ENST00000437951.6
CDS GCA 72 bp TTCAGGTCCCGCAGCTGGAGCAGAAGAACTGTCCTCTaGTCCACACTGGAAAGGCAGGATGTGTACTTTTTA +
Preference number: 6 (lower is better)
Translates to: FRSRSWSRRTVL*STLERQDVYFL
Trigger: TAAAAAGTACACATCCTGCCTTTCCAGTGTGGAGCAGAGGACAGTTCTTCTGCTCCAGCTGCGGGACCTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546744.5
CDS CCA 72 bp TTGAAGTGCTCGTACATTTGCTTGGGAGTCATTAACTaGAACATGGTCTGCAGGGCATGGGCGCTGACGAGT +
Preference number: 6 (lower is better)
Translates to: LKCSYICLGVIN*NMVCRAWALTS
Trigger: ACTCGTCAGCGCCCATGCCCTGCAGACCATGTTCCAGTTAATGACTCCCAAGCAAATGTACGAGCACTTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000331920.11
ENST00000375271.4
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
ENST00000437951.6
CDS CAA 90 bp AGGGAAGTGGCTTTTGAGGAAAGGAAGAAGACTACAGGGCATAGATaGTCCTCGGGAGCTGGCTTACCTGACGAGTTTTCCAGTGCTGTT +
Preference number: 6 (lower is better)
Translates to: REVAFEERKKTTGHR*SSGAGLPDEFSSAV
Trigger: AACAGCACTGGAAAACTCGTCAGGTAAGCCAGCTCCCGAGGACAATCTATGCCCTGTAGTCTTCTTCCTTTCCTCAAAAGCCACTTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488809.2
CDS GCA 72 bp GGTGGTGAAGGAAAGCACCTTTTGAGTGGAGTTCTGTaGGACACTCTGATGAACCACCTCCACATATGTCCT +
Preference number: 6 (lower is better)
Translates to: GGEGKHLLSGVL*DTLMNHLHICP
Trigger: AGGACATATGTGGAGGTGGTTCATCAGAGTGTCGCACAGAACTCCACTCAAAAGGTGCTTTCCTTCACCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331920.11
ENST00000375271.4
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
ENST00000437951.6
CDS GCA 72 bp CAACCTGGCTCCCCACAGGGATGCCACTTCACATTCTaGAAAACTGTACCAGGTAGTTGCTTCCCTACAATA +
Preference number: 6 (lower is better)
Translates to: QPGSPQGCHFTF*KTVPGSCFPTI
Trigger: TATTGTAGGGAAGCAACTACCTGGTACAGTTTTGCAGAATGTGAAGTGGCATCCCTGTGGGGAGCCAGGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550136.1
CDS CCA 72 bp CCACTACTACCGCTGCCTTGGGAGAATTTAGCGCACTaGATTTTCTACAAGGCTACTCCTCGTAAGGAAACC +
Preference number: 6 (lower is better)
Translates to: PLLPLPWENLAH*IFYKATPRKET
Trigger: GGTTTCCTTACGAGGAGTAGCCTTGTAGAAAATCCAGTGCGCTAAATTCTCCCAAGGCAGCGGTAGTAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS CAA 72 bp GCTTTTGAGGAAAGGAAGAAGACTACAGGGCATAGATaGTCCTCGGGAGCTGGCTTACCTGACGAGTTTTCC +
Preference number: 6 (lower is better)
Translates to: AFEERKKTTGHR*SSGAGLPDEFS
Trigger: GGAAAACTCGTCAGGTAAGCCAGCTCCCGAGGACAATCTATGCCCTGTAGTCTTCTTCCTTTCCTCAAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488809.2
CDS CAA 72 bp ACATACTCGTACCCCTTGAAGTGCTCGTACATTTGCTaGGGAGTCATTAACTGGAACATGGTCTGCAGGGCA +
Preference number: 6 (lower is better)
Translates to: TYSYPLKCSYIC*GVINWNMVCRA
Trigger: TGCCCTGCAGACCATGTTCCAGTTAATGACTCCCAAGCAAATGTACGAGCACTTCAAGGGGTACGAGTATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331920.11
ENST00000375271.4
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
ENST00000437951.6
CDS CAA 90 bp GCTTTGTCCTCGTTCCAGTTGATGTGTGAGACATACTCGTACCCCTaGAAGTGCTCGTACATTTGCTTGGGAGTCATTAACTGGAACATG +
Preference number: 6 (lower is better)
Translates to: ALSSFQLMCETYSYP*KCSYICLGVINWNM
Trigger: CATGTTCCAGTTAATGACTCCCAAGCAAATGTACGAGCACTTCAAGGGGTACGAGTATGTCTCACACATCAACTGGAACGAGGACAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331920.11
ENST00000375271.4
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
ENST00000437951.6
CDS CAA 72 bp AGAATTGCAGGAAAAATGAGCAGAACCATGGCAAAATaGAACACCACTACTACCGCTGCCTGGAGGGAGAAC +
Preference number: 6 (lower is better)
Translates to: RIAGKMSRTMAK*NTTTTAAWREN
Trigger: GTTCTCCCTCCAGGCAGCGGTAGTAGTGGTGTTCAATTTTGCCATGGTTCTGCTCATTTTTCCTGCAATTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000331920.11
ENST00000375271.4
ENST00000429896.6
ENST00000430669.6
ENST00000437951.6
CDS CAA 72 bp GCAAAACTGTACCAGGTAGTTGCTTCCCTACAATACTaGTTACAGACCAACAGGGCAAGTTTGCCTGGCAGA +
Preference number: 6 (lower is better)
Translates to: AKLYQVVASLQY*LQTNRASLPGR
Trigger: TCTGCCAGGCAAACTTGCCCTGTTGGTCTGTAACAAGTATTGTAGGGAAGCAACTACCTGGTACAGTTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550136.1
CDS CAA 72 bp TCTTTAACTCTTCCAGGAATTCCAAAGGGTCGAAGTTaGTCCACCGCAAAGGAGGTTTACCTCTTCCACCCA +
Preference number: 6 (lower is better)
Translates to: SLTLPGIPKGRS*STAKEVYLFHP
Trigger: TGGGTGGAAGAGGTAAACCTCCTTTGCGGTGGACAAACTTCGACCCTTTGGAATTCCTGGAAGAGTTAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548420.1
CDS CAA 90 bp AGTTTATTTTCTTTAACTCTTCCAGGAATTCCAAAGGGTCGAAGTTaGTCCACCGCAAAGGAGGTTTACCTCTTCCACCCACAGCTCCTC +
Preference number: 6 (lower is better)
Translates to: SLFSLTLPGIPKGRS*STAKEVYLFHPQLL
Trigger: GAGGAGCTGTGGGTGGAAGAGGTAAACCTCCTTTGCGGTGGACAAACTTCGACCCTTTGGAATTCCTGGAAGAGTTAAAGAAAATAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548420.1
CDS GCA 72 bp CAGTTGATGTGTGAGACATACTCGTACCCCTTGAAGTaGTCGTACATTTGCTTGGGAGTCATTAACTGGAAC +
Preference number: 6 (lower is better)
Translates to: QLMCETYSYPLK*SYICLGVINWN
Trigger: GTTCCAGTTAATGACTCCCAAGCAAATGTACGAGCACTTCAAGGGGTACGAGTATGTCTCACACATCAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331920.11
ENST00000375271.4
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
ENST00000437951.6
CDS CCA 72 bp GGGATTCTTTTATTCTGTCCTGTTTCACTGAAGGCGTaGGCCAGAAGAAAAACATCATCCACACCAACACCA +
Preference number: 6 (lower is better)
Translates to: GILLFCPVSLKA*ARRKTSSTPTP
Trigger: TGGTGTTGGTGTGGATGATGTTTTTCTTCTGGCCCACGCCTTCAGTGAAACAGGACAGAATAAAAGAATCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000331920.11
ENST00000375271.4
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
ENST00000437951.6
CDS CAA 72 bp TCTTTAACTCTTCCAGGAATTCCAAAGGGTCGAAGTTaGTCCACCGCAAAGGAGGTTTACCTAGGAGGTATG +
Preference number: 6 (lower is better)
Translates to: SLTLPGIPKGRS*STAKEVYLGGM
Trigger: CATACCTCCTAGGTAAACCTCCTTTGCGGTGGACAAACTTCGACCCTTTGGAATTCCTGGAAGAGTTAAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000331920.11
ENST00000429896.6
ENST00000430669.6
ENST00000437951.6
ENST00000546820.5
ENST00000547672.5
ENST00000548379.5
ENST00000551845.5
ENST00000553011.5
CDS CAA 72 bp TCGTTCCAGTTGATGTGTGAGACATACTCGTACCCCTaGAAGTGCTCGTACATTTGCTTGGGAGTCATTAAC +
Preference number: 6 (lower is better)
Translates to: SFQLMCETYSYP*KCSYICLGVIN
Trigger: GTTAATGACTCCCAAGCAAATGTACGAGCACTTCAAGGGGTACGAGTATGTCTCACACATCAACTGGAACGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331920.11
ENST00000375271.4
ENST00000375290.6
ENST00000429896.6
ENST00000430669.6
ENST00000437951.6
CDS CAA 90 bp AGTTTATTTTCTTTAACTCTTCCAGGAATTCCAAAGGGTCGAAGTTaGTCCACCGCAAAGGAGGTTTACCTAGGAGGTATGCTGTCCCAG +
Preference number: 6 (lower is better)
Translates to: SLFSLTLPGIPKGRS*STAKEVYLGGMLSQ
Trigger: CTGGGACAGCATACCTCCTAGGTAAACCTCCTTTGCGGTGGACAAACTTCGACCCTTTGGAATTCCTGGAAGAGTTAAAGAAAATAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000331920.11
ENST00000429896.6
ENST00000430669.6
ENST00000437951.6
ENST00000546820.5
ENST00000547672.5
ENST00000548379.5
ENST00000551845.5
ENST00000553011.5
CDS CAA 72 bp TCTTTAACTCTTCCAGGAATTCCAAAGGGTCGAAGTTaGTCCACCGCAAAGGAGGTTTACCTCTGTTGTACA +
Preference number: 6 (lower is better)
Translates to: SLTLPGIPKGRS*STAKEVYLCCT
Trigger: TGTACAACAGAGGTAAACCTCCTTTGCGGTGGACAAACTTCGACCCTTTGGAATTCCTGGAAGAGTTAAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS TCA 72 bp GGCTTTGAAACCTGGCTCTCTCATTTCATAACTGCATaGACTTGGACAAATGCTCTAATTAGTCTAATTCCC +
Preference number: 6 (lower is better)
Translates to: GFETWLSHFITA*TWTNALISLIP
Trigger: GGGAATTAGACTAATTAGAGCATTTGTCCAAGTTCATGCAGTTATGAAATGAGAGAGCCAGGTTTCAAAGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550136.1
CDS CAA 90 bp AGTTTATTTTCTTTAACTCTTCCAGGAATTCCAAAGGGTCGAAGTTaGTCCACCGCAAAGGAGGTTTACCTCTGTTGTACATGTATACAT +
Preference number: 6 (lower is better)
Translates to: SLFSLTLPGIPKGRS*STAKEVYLCCTCIH
Trigger: ATGTATACATGTACAACAGAGGTAAACCTCCTTTGCGGTGGACAAACTTCGACCCTTTGGAATTCCTGGAAGAGTTAAAGAAAATAAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375290.6
CDS CCA 72 bp AGTATTGACACATACTCAGGTGCGGAGATGTTTTACTaGCAGATCATGTCCTTAATAGGTAGTATTCAAAAT +
Preference number: 6 (lower is better)
Translates to: SIDTYSGAEMFY*QIMSLIGSIQN
Trigger: ATTTTGAATACTACCTATTAAGGACATGATCTGCCAGTAAAACATCTCCGCACCTGAGTATGTGTCAATACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550136.1
CDS CAA 72 bp TTGATCAACTCTCATTTACACTTGAGAAGGACATCATaGTGCATTAGAAAAATGAATGGGCTTGAAGCCAGA +
Preference number: 6 (lower is better)
Translates to: LINSHLHLRRTS*CIRKMNGLEAR
Trigger: TCTGGCTTCAAGCCCATTCATTTTTCTAATGCACAATGATGTCCTTCTCAAGTGTAAATGAGAGTTGATCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550136.1
CDS GCA 72 bp CTGCTCTTAACCATTAATATTATAAACAACAACATGTaGCAGGTGGGTCAAATTCTAACTTCACAGTCTCTT +
Preference number: 6 (lower is better)
Translates to: LLLTINIINNNM*QVGQILTSQSL
Trigger: AAGAGACTGTGAAGTTAGAATTTGACCCACCTGGCACATGTTGTTGTTTATAATATTAATGGTTAAGAGCAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550136.1
CDS TCA 72 bp TTAATTCTATACAGCATCAACATAGACTATCCGGCATaGGTAGGTTCTCACTTTATATTACTTGATCAACTC +
Preference number: 6 (lower is better)
Translates to: LILYSINIDYPA*VGSHFILLDQL
Trigger: GAGTTGATCAAGTAATATAAAGTGAGAACCTACTCATGCCGGATAGTCTATGTTGATGCTGTATAGAATTAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550136.1