Pregenerated sensors for PSMD8 (Homo sapiens)
Ensembl gene IDs: ENSG00000099341Ensembl transcript IDs: ENST00000215071.9, ENST00000590331.1, ENST00000591250.1, ENST00000592001.5, ENST00000592035.5, ENST00000620216.4
Found 87 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ATAAAGACAGCAGCCAACATGCGTGCAGCGCCCACCTCCAGCTGCTaGCAGGTACTAAGCTCATCCCATGTATCTAGCCCCATTCTGTGG | + |
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Preference number: 1 (lower is better) Translates to: IKTAANMRAAPTSSC*QVLSSSHVSSPILW Trigger: CCACAGAATGGGGCTAGATACATGGGATGAGCTTAGTACCTGGCAGCAGCTGGAGGTGGGCGCTGCACGCATGTTGGCTGCTGTCTTTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000592035.5 |
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| 3UTR GCA 90 bp | TTGATAAAGACAGCAGCCAACATGCGTGCAGCGCCCACCTCCAGCTaGTGCCAGGTACTAAGCTCATCCCATGTATCTAGCCCCATTCTG | + |
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Preference number: 1 (lower is better) Translates to: LIKTAANMRAAPTSS*CQVLSSSHVSSPIL Trigger: CAGAATGGGGCTAGATACATGGGATGAGCTTAGTACCTGGCAGCAGCTGGAGGTGGGCGCTGCACGCATGTTGGCTGCTGTCTTTATCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000592035.5 |
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| 3UTR TCA 90 bp | CAGCCCTCCTCCTGCAACACCAAGCGTTGCTCGTGCTCAAACGCCTaGGACCAAATGAAGCAAAGTCTTGCAGAAAAAGCTGCCACCTCT | + |
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Preference number: 1 (lower is better) Translates to: QPSSCNTKRCSCSNA*DQMKQSLAEKAATS Trigger: AGAGGTGGCAGCTTTTTCTGCAAGACTTTGCTTCATTTGGTCTCAGGCGTTTGAGCACGAGCAACGCTTGGTGTTGCAGGAGGAGGGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000592035.5 |
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| 3UTR TCA 90 bp | CCTGCAACACCAAGCGTTGCTCGTGCTCAAACGCCTGAGACCAAATaGAGCAAAGTCTTGCAGAAAAAGCTGCCACCTCTAAGAAATTTT | + |
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Preference number: 1 (lower is better) Translates to: PATPSVARAQTPETK*SKVLQKKLPPLRNF Trigger: AAAATTTCTTAGAGGTGGCAGCTTTTTCTGCAAGACTTTGCTTCATTTGGTCTCAGGCGTTTGAGCACGAGCAACGCTTGGTGTTGCAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000592035.5 |
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| 3UTR-3UTR GCA 90 bp | CTCCTCCTGCAACACCAAGCGTTGCTCGTGCTCAAACGCCTGAGACCAAATGAAGCGCCCACCTCCAGCTaGTGCCAGGTACTAAGCTCA | + |
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Preference number: 2 (lower is better) Translates to: LLLQHQALLVLKRLRPNEAPTSS*CQVLSS Trigger: TGAGCTTAGTACCTGGCAGCAGCTGGAGGTGGGCGC...TTCATTTGGTCTCAGGCGTTTGAGCACGAGCAACGCTTGGTGTTGCAGGAGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592035.5 |
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| 3UTR-3UTR GCA 90 bp | CTCCTCCTGCAACACCAAGCGTTGCTCGTGCTCAAACGCCTGAGACCAAATGAAAGACAGCAGCCAACATaGGTGCAGCGCCCACCTCCA | + |
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Preference number: 2 (lower is better) Translates to: LLLQHQALLVLKRLRPNERQQPT*VQRPPP Trigger: TGGAGGTGGGCGCTGCACGCATGTTGGCTGCTGTCT...TTCATTTGGTCTCAGGCGTTTGAGCACGAGCAACGCTTGGTGTTGCAGGAGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592035.5 |
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| 3UTR CAA 90 bp | ACCTTCCATAGCCTGGTCCCAGCCCTCCTCCTGCAACACCAAGCGTaGCTCGTGCTCAAACGCCTGAGACCAAATGAAGCAAAGTCTTGC | + |
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Preference number: 2 (lower is better) Translates to: TFHSLVPALLLQHQA*LVLKRLRPNEAKSC Trigger: GCAAGACTTTGCTTCATTTGGTCTCAGGCGTTTGAGCACGAGCAACGCTTGGTGTTGCAGGAGGAGGGCTGGGACCAGGCTATGGAAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592035.5 |
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| 3UTR-3UTR GCA 90 bp | CTCCTCCTGCAACACCAAGCGTTGCTCGTGCTCAAACGCCTGAGACCAAATGAACCCACCTCCAGCTGCTaGCAGGTACTAAGCTCATCC | + |
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Preference number: 2 (lower is better) Translates to: LLLQHQALLVLKRLRPNEPTSSC*QVLSSS Trigger: GGATGAGCTTAGTACCTGGCAGCAGCTGGAGGTGGG...TTCATTTGGTCTCAGGCGTTTGAGCACGAGCAACGCTTGGTGTTGCAGGAGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592035.5 |
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| 3UTR-3UTR CCA 90 bp | AAAAAGCTGCCACCTCTAAGAAATTTTGATAAAGACAGCAGCCAACATGCGTGCTCTAGCCCCATTCTGTaGATAGAGAAACTGATGTCA | + |
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Preference number: 2 (lower is better) Translates to: KKLPPLRNFDKDSSQHACSSPIL*IEKLMS Trigger: TGACATCAGTTTCTCTATCCACAGAATGGGGCTAGA...GCACGCATGTTGGCTGCTGTCTTTATCAAAATTTCTTAGAGGTGGCAGCTTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000592035.5 |
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| 3UTR GCA 72 bp | GCAGCCAACATGCGTGCAGCGCCCACCTCCAGCTGCTaGCAGGTACTAAGCTCATCCCATGTATCTAGCCCC | + |
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Preference number: 3 (lower is better) Translates to: AANMRAAPTSSC*QVLSSSHVSSP Trigger: GGGGCTAGATACATGGGATGAGCTTAGTACCTGGCAGCAGCTGGAGGTGGGCGCTGCACGCATGTTGGCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592035.5 |
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| CDS-3UTR CCA 90 bp | GACAGCAGCCAACATGCGTGCAGCGCCCACCTCCAGCTGCTGCCAGGTACTAAGCCGCGGCCCGGGACTTaGTTGGGTCCAGACACCTCG | + |
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Preference number: 4 (lower is better) Translates to: DSSQHACSAHLQLLPGTKPRPGT*LGPDTS Trigger: CGAGGTGTCTGGACCCAACCAAGTCCCGGGCCGCGG...CTTAGTACCTGGCAGCAGCTGGAGGTGGGCGCTGCACGCATGTTGGCTGCTGTC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592035.5 |
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| CDS-3UTR CCA 90 bp | CTGGTCCCAGCCCTCCTCCTGCAACACCAAGCGTTGCTCGTGCTCAAACGCCTGCCGCCTCAGTCTCGCTaGCACCGAGGTGGCTTCCGC | + |
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Preference number: 4 (lower is better) Translates to: LVPALLLQHQALLVLKRLPPQSR*HRGGFR Trigger: GCGGAAGCCACCTCGGTGCCAGCGAGACTGAGGCGG...CAGGCGTTTGAGCACGAGCAACGCTTGGTGTTGCAGGAGGAGGGCTGGGACCAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592035.5 |
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| CDS-3UTR TCA 90 bp | ATTTTGATAAAGACAGCAGCCAACATGCGTGCAGCGCCCACCTCCAGCTGCTGCCCCTCTCTCGCTTCTTaGCGCCCTCCGAGCCCCCAC | + |
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Preference number: 4 (lower is better) Translates to: ILIKTAANMRAAPTSSCCPSLAS*RPPSPH Trigger: GTGGGGGCTCGGAGGGCGTCAAGAAGCGAGAGAGGG...GCAGCAGCTGGAGGTGGGCGCTGCACGCATGTTGGCTGCTGTCTTTATCAAAAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000592035.5 |
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| CDS-3UTR CCA 90 bp | CTCCTCCTGCAACACCAAGCGTTGCTCGTGCTCAAACGCCTGAGACCAAATGAATCGCTGGCACCGAGGTaGCTTCCGCGGCCCGGGACT | + |
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Preference number: 4 (lower is better) Translates to: LLLQHQALLVLKRLRPNESLAPR*LPRPGT Trigger: AGTCCCGGGCCGCGGAAGCCACCTCGGTGCCAGCGA...TTCATTTGGTCTCAGGCGTTTGAGCACGAGCAACGCTTGGTGTTGCAGGAGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592035.5 |
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| CDS-3UTR CCA 90 bp | GACAGCAGCCAACATGCGTGCAGCGCCCACCTCCAGCTGCTGCCAGGTACTAAGCTGATCTTGAACTCCTaGGCTCAAGCGACGCTCCCC | + |
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Preference number: 4 (lower is better) Translates to: DSSQHACSAHLQLLPGTKLILNS*AQATLP Trigger: GGGGAGCGTCGCTTGAGCCCAGGAGTTCAAGATCAG...CTTAGTACCTGGCAGCAGCTGGAGGTGGGCGCTGCACGCATGTTGGCTGCTGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592035.5 |
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| CDS-3UTR TCA 90 bp | AAAGACAGCAGCCAACATGCGTGCAGCGCCCACCTCCAGCTGCTGCCAGGTACTCTGGTGCATATAGGCTaGCTCGGGGAGCTGCTCCTT | + |
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Preference number: 4 (lower is better) Translates to: KDSSQHACSAHLQLLPGTLVHIG*LGELLL Trigger: AAGGAGCAGCTCCCCGAGTCAGCCTATATGCACCAG...AGTACCTGGCAGCAGCTGGAGGTGGGCGCTGCACGCATGTTGGCTGCTGTCTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000592035.5 |
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| CDS-3UTR GCA 90 bp | GACAGCAGCCAACATGCGTGCAGCGCCCACCTCCAGCTGCTGCCAGGTACTAAGCCCGAATCCCAATCCTaGCACTCCGACCAGTTAAGC | + |
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Preference number: 4 (lower is better) Translates to: DSSQHACSAHLQLLPGTKPESQS*HSDQLS Trigger: GCTTAACTGGTCGGAGTGGCAGGATTGGGATTCGGG...CTTAGTACCTGGCAGCAGCTGGAGGTGGGCGCTGCACGCATGTTGGCTGCTGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592035.5 |
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| CDS-3UTR GCA 90 bp | CTCCTCCTGCAACACCAAGCGTTGCTCGTGCTCAAACGCCTGAGACCAAATGAAGGTCCCACGGCCCCTTaGCCTGTACCCCAGCCACCT | + |
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Preference number: 4 (lower is better) Translates to: LLLQHQALLVLKRLRPNEGPTAP*PVPQPP Trigger: AGGTGGCTGGGGTACAGGGCAAGGGGCCGTGGGACC...TTCATTTGGTCTCAGGCGTTTGAGCACGAGCAACGCTTGGTGTTGCAGGAGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000592035.5 |
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| CDS-3UTR GCA 90 bp | AAAGACAGCAGCCAACATGCGTGCAGCGCCCACCTCCAGCTGCTGCCAGGTACTTGTCCTTGCGTAGGATaGTCCATTGGGCCCCGATCT | + |
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Preference number: 4 (lower is better) Translates to: KDSSQHACSAHLQLLPGTCPCVG*SIGPRS Trigger: AGATCGGGGCCCAATGGAGCATCCTACGCAAGGACA...AGTACCTGGCAGCAGCTGGAGGTGGGCGCTGCACGCATGTTGGCTGCTGTCTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000592035.5 |
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| CDS-3UTR GCA 90 bp | ATTTTGATAAAGACAGCAGCCAACATGCGTGCAGCGCCCACCTCCAGCTGCTGCGTGCGCGGGAGCCACTaGACCCAGCCCAATTTCACC | + |
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Preference number: 4 (lower is better) Translates to: ILIKTAANMRAAPTSSCCVRGSH*TQPNFT Trigger: GGTGAAATTGGGCTGGGTGCAGTGGCTCCCGCGCAC...GCAGCAGCTGGAGGTGGGCGCTGCACGCATGTTGGCTGCTGTCTTTATCAAAAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000592035.5 |
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| CDS-3UTR CCA 90 bp | CCTAGGTGGGAGGATCCACCTTGGTGCGCGGGAGCCACTGCACCCAGCCCAATTTCCGAGCCCCCACTTTaGCTGTTCCAAATCTTTCAC | + |
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Preference number: 4 (lower is better) Translates to: PRWEDPPWCAGATAPSPISEPPL*LFQIFH Trigger: GTGAAAGATTTGGAACAGCCAAAGTGGGGGCTCGGA...AATTGGGCTGGGTGCAGTGGCTCCCGCGCACCAAGGTGGATCCTCCCACCTAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000592035.5 |
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| CDS-3UTR CCA 90 bp | CTGGTCCCAGCCCTCCTCCTGCAACACCAAGCGTTGCTCGTGCTCAAACGCCTGTCCTCACTTCCCACTTaGTCTTGCCTGGAATCCACC | + |
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Preference number: 4 (lower is better) Translates to: LVPALLLQHQALLVLKRLSSLPT*SCLEST Trigger: GGTGGATTCCAGGCAAGACCAAGTGGGAAGTGAGGA...CAGGCGTTTGAGCACGAGCAACGCTTGGTGTTGCAGGAGGAGGGCTGGGACCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592035.5 |
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| CDS-3UTR TCA 90 bp | ACAGCAGCCAACATGCGTGCAGCGCCCACCTCCAGCTGCTGCCAGGTACTAAGCCAAAGTAGTAGCATTTaGGCTGGGCCATGTAGCGCT | + |
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Preference number: 4 (lower is better) Translates to: TAANMRAAPTSSCCQVLSQSSSI*AGPCSA Trigger: AGCGCTACATGGCCCAGCTCAAATGCTACTACTTTG...GCTTAGTACCTGGCAGCAGCTGGAGGTGGGCGCTGCACGCATGTTGGCTGCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592035.5 |
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| CDS-3UTR TCA 90 bp | ATTTTGATAAAGACAGCAGCCAACATGCGTGCAGCGCCCACCTCCAGCTGCTGCCTGGTCTCGAACTCCTaGCCTCAGGCGATCCTCCCA | + |
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Preference number: 4 (lower is better) Translates to: ILIKTAANMRAAPTSSCCLVSNS*PQAILP Trigger: TGGGAGGATCGCCTGAGGTCAGGAGTTCGAGACCAG...GCAGCAGCTGGAGGTGGGCGCTGCACGCATGTTGGCTGCTGTCTTTATCAAAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000592035.5 |
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| CDS-3UTR CCA 90 bp | GAAATTTTGATAAAGACAGCAGCCAACATGCGTGCAGCGCCCACCTCCAGCTGCGGCCCGGGACTTGGTTaGGTCCAGACACCTCGTAGC | + |
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Preference number: 4 (lower is better) Translates to: EILIKTAANMRAAPTSSCGPGLG*VQTPRS Trigger: GCTACGAGGTGTCTGGACCCAACCAAGTCCCGGGCC...GCAGCTGGAGGTGGGCGCTGCACGCATGTTGGCTGCTGTCTTTATCAAAATTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000592035.5 |
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| CDS-3UTR CCA 90 bp | CTCCTCCTGCAACACCAAGCGTTGCTCGTGCTCAAACGCCTGAGACCAAATGAATGGGAGGATCCACCTTaGTGCGCGGGAGCCACTGCA | + |
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Preference number: 4 (lower is better) Translates to: LLLQHQALLVLKRLRPNEWEDPP*CAGATA Trigger: TGCAGTGGCTCCCGCGCACCAAGGTGGATCCTCCCA...TTCATTTGGTCTCAGGCGTTTGAGCACGAGCAACGCTTGGTGTTGCAGGAGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592035.5 |
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| 3UTR CAA 72 bp | AGCCTGGTCCCAGCCCTCCTCCTGCAACACCAAGCGTaGCTCGTGCTCAAACGCCTGAGACCAAATGAAGCA | + |
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Preference number: 4 (lower is better) Translates to: SLVPALLLQHQA*LVLKRLRPNEA Trigger: TGCTTCATTTGGTCTCAGGCGTTTGAGCACGAGCAACGCTTGGTGTTGCAGGAGGAGGGCTGGGACCAGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592035.5 |
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| CDS-3UTR TCA 90 bp | CCTGGATGGGTATCTAGGACGGAAGATGGGCTAAGACAGGCCGCACAATCCCTGTTCCATGCTCAGGTTTaGCACACGTGGCCACACATG | + |
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Preference number: 4 (lower is better) Translates to: PGWVSRTEDGLRQAAQSLFHAQV*HTWPHM Trigger: CATGTGTGGCCACGTGTGTCAAACCTGAGCATGGAA...CAGGGATTGTGCGGCCTGTCTTAGCCCATCTTCCGTCCTAGATACCCATCCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590331.1 |
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| CDS-3UTR GCA 90 bp | CCTGGATGGGTATCTAGGACGGAAGATGGGCTAAGACAGGCCGCACAATCCCTGAGGCCGCACAATCCCTaGCTGCTGAACCAATTCCAT | + |
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Preference number: 4 (lower is better) Translates to: PGWVSRTEDGLRQAAQSLRPHNP*LLNQFH Trigger: ATGGAATTGGTTCAGCAGGCAGGGATTGTGCGGCCT...CAGGGATTGTGCGGCCTGTCTTAGCCCATCTTCCGTCCTAGATACCCATCCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590331.1 |
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| CDS-3UTR CCA 90 bp | CTAAGAAATTTTGATAAAGACAGCAGCCAACATGCGTGCAGCGCCCACCTCCAGCCCACCACCCCCGCGTaGGTCCATTCCAGTCATCTC | + |
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Preference number: 4 (lower is better) Translates to: LRNFDKDSSQHACSAHLQPTTPA*VHSSHL Trigger: GAGATGACTGGAATGGACCCACGCGGGGGTGGTGGG...CTGGAGGTGGGCGCTGCACGCATGTTGGCTGCTGTCTTTATCAAAATTTCTTAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000592035.5 |
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| CDS-3UTR CCA 90 bp | AGCTGCTGCCAGGTACTAAGCTCATCCCATGTATCTAGCCCCATTCTGTGGATAAGTGACTTCACCCCTTaGTCCCACGGCCCCTTGCCC | + |
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Preference number: 4 (lower is better) Translates to: SCCQVLSSSHVSSPILWISDFTP*SHGPLP Trigger: GGGCAAGGGGCCGTGGGACCAAGGGGTGAAGTCACT...TATCCACAGAATGGGGCTAGATACATGGGATGAGCTTAGTACCTGGCAGCAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000592035.5 |
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| CDS-3UTR TCA 90 bp | ACGGAAGATGGGCTAAGACAGGCCGCACAATCCCTGCCTGCTGAACCAATTCCACCAAGGGTGGTGAGATaGGAGCCGTTATCCACAATC | + |
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Preference number: 4 (lower is better) Translates to: TEDGLRQAAQSLPAEPIPPRVVR*EPLSTI Trigger: GATTGTGGATAACGGCTCTCATCTCACCACCCTTGG...TGGAATTGGTTCAGCAGGCAGGGATTGTGCGGCCTGTCTTAGCCCATCTTCCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590331.1 |
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| CDS-3UTR GCA 90 bp | AGCTGCTGCCAGGTACTAAGCTCATCCCATGTATCTAGCCCCATTCTGTGGATAGCGCCCACCTCCAGCTaGTGCCAGGTACTAAGCTCA | + |
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Preference number: 4 (lower is better) Translates to: SCCQVLSSSHVSSPILWIAPTSS*CQVLSS Trigger: TGAGCTTAGTACCTGGCAGCAGCTGGAGGTGGGCGC...TATCCACAGAATGGGGCTAGATACATGGGATGAGCTTAGTACCTGGCAGCAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000592035.5 |
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| CDS-3UTR GCA 90 bp | AGCTGCTGCCAGGTACTAAGCTCATCCCATGTATCTAGCCCCATTCTGTGGATAAGACAGCAGCCAACATaGGTGCAGCGCCCACCTCCA | + |
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Preference number: 4 (lower is better) Translates to: SCCQVLSSSHVSSPILWIRQQPT*VQRPPP Trigger: TGGAGGTGGGCGCTGCACGCATGTTGGCTGCTGTCT...TATCCACAGAATGGGGCTAGATACATGGGATGAGCTTAGTACCTGGCAGCAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000592035.5 |
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| CDS-3UTR GCA 90 bp | AGCTGCTGCCAGGTACTAAGCTCATCCCATGTATCTAGCCCCATTCTGTGGATATCCCAGCCCTCCTCCTaGAACACCAAGCGTTGCTCG | + |
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Preference number: 4 (lower is better) Translates to: SCCQVLSSSHVSSPILWISQPSS*NTKRCS Trigger: CGAGCAACGCTTGGTGTTGCAGGAGGAGGGCTGGGA...TATCCACAGAATGGGGCTAGATACATGGGATGAGCTTAGTACCTGGCAGCAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000592035.5 |
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| CDS-3UTR CCA 90 bp | CTCCTCCTGCAACACCAAGCGTTGCTCGTGCTCAAACGCCTGAGACCAAATGAATGGTCTGTATGTCCTTaGCAGGCAGCCGCTCCAACT | + |
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Preference number: 4 (lower is better) Translates to: LLLQHQALLVLKRLRPNEWSVCP*QAAAPT Trigger: AGTTGGAGCGGCTGCCTGCCAAGGACATACAGACCA...TTCATTTGGTCTCAGGCGTTTGAGCACGAGCAACGCTTGGTGTTGCAGGAGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592035.5 |
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| CDS-3UTR GCA 90 bp | CAAGCGTTGCTCGTGCTCAAACGCCTGAGACCAAATGAAGCAAAGTCTTGCAGACCCACCTCCAGCTGCTaGCAGGTACTAAGCTCATCC | + |
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Preference number: 4 (lower is better) Translates to: QALLVLKRLRPNEAKSCRPTSSC*QVLSSS Trigger: GGATGAGCTTAGTACCTGGCAGCAGCTGGAGGTGGG...TCTGCAAGACTTTGCTTCATTTGGTCTCAGGCGTTTGAGCACGAGCAACGCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592035.5 |
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| CDS-3UTR CCA 90 bp | ACGGAAGATGGGCTAAGACAGGCCGCACAATCCCTGCCTGCTGAACCAATTCCACCCACCCTCGCTTCTTaGCGTAGTCTGTCATCTTTT | + |
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Preference number: 4 (lower is better) Translates to: TEDGLRQAAQSLPAEPIPPTLAS*RSLSSF Trigger: AAAAGATGACAGACTACGCCAAGAAGCGAGGGTGGG...TGGAATTGGTTCAGCAGGCAGGGATTGTGCGGCCTGTCTTAGCCCATCTTCCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590331.1 |
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| CDS-3UTR CCA 90 bp | ATTTTGATAAAGACAGCAGCCAACATGCGTGCAGCGCCCACCTCCAGCTGCTGCCCCCAGCCACCTTCTTaGCGTAGTCTGTCATCTTTT | + |
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Preference number: 4 (lower is better) Translates to: ILIKTAANMRAAPTSSCCPQPPS*RSLSSF Trigger: AAAAGATGACAGACTACGCCAAGAAGGTGGCTGGGG...GCAGCAGCTGGAGGTGGGCGCTGCACGCATGTTGGCTGCTGTCTTTATCAAAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000592035.5 |
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| CDS-3UTR CCA 90 bp | CCTGGATGGGTATCTAGGACGGAAGATGGGCTAAGACAGGCCGCACAATCCCTGCGATCTCATCCTGGATaGGTATCTAGGACGGAAGAT | + |
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Preference number: 4 (lower is better) Translates to: PGWVSRTEDGLRQAAQSLRSHPG*VSRTED Trigger: ATCTTCCGTCCTAGATACCCATCCAGGATGAGATCG...CAGGGATTGTGCGGCCTGTCTTAGCCCATCTTCCGTCCTAGATACCCATCCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590331.1 |
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| CDS-3UTR GCA 90 bp | ACGGAAGATGGGCTAAGACAGGCCGCACAATCCCTGCCTGCTGAACCAATTCCAGCTGAACCAATTCCATaGTCAGGTTTGACACACGTG | + |
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Preference number: 4 (lower is better) Translates to: TEDGLRQAAQSLPAEPIPAEPIP*SGLTHV Trigger: CACGTGTGTCAAACCTGAGCATGGAATTGGTTCAGC...TGGAATTGGTTCAGCAGGCAGGGATTGTGCGGCCTGTCTTAGCCCATCTTCCGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590331.1 |
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| CDS-3UTR GCA 90 bp | AGCTGCTGCCAGGTACTAAGCTCATCCCATGTATCTAGCCCCATTCTGTGGATACTTCCCACTTGGTCTTaGCTGGAATCCACCATCAGG | + |
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Preference number: 4 (lower is better) Translates to: SCCQVLSSSHVSSPILWILPTWS*LESTIR Trigger: CCTGATGGTGGATTCCAGGCAAGACCAAGTGGGAAG...TATCCACAGAATGGGGCTAGATACATGGGATGAGCTTAGTACCTGGCAGCAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000592035.5 |
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| CDS-3UTR CCA 90 bp | GAAATTTTGATAAAGACAGCAGCCAACATGCGTGCAGCGCCCACCTCCAGCTGCCCACTTGGTCTTGCCTaGAATCCACCATCAGGAAAA | + |
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Preference number: 4 (lower is better) Translates to: EILIKTAANMRAAPTSSCPLGLA*NPPSGK Trigger: TTTTCCTGATGGTGGATTCCAGGCAAGACCAAGTGG...GCAGCTGGAGGTGGGCGCTGCACGCATGTTGGCTGCTGTCTTTATCAAAATTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000592035.5 |
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| CDS-3UTR TCA 90 bp | CTAAGAAATTTTGATAAAGACAGCAGCCAACATGCGTGCAGCGCCCACCTCCAGTCGTGCTCAAACGCCTaGGACCAAATGAAGCAAAGT | + |
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Preference number: 4 (lower is better) Translates to: LRNFDKDSSQHACSAHLQSCSNA*DQMKQS Trigger: ACTTTGCTTCATTTGGTCTCAGGCGTTTGAGCACGA...CTGGAGGTGGGCGCTGCACGCATGTTGGCTGCTGTCTTTATCAAAATTTCTTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000592035.5 |
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| CDS-3UTR CCA 90 bp | GAAATTTTGATAAAGACAGCAGCCAACATGCGTGCAGCGCCCACCTCCAGCTGCTCTAGCCCCATTCTGTaGATAGAGAAACTGATGTCA | + |
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Preference number: 4 (lower is better) Translates to: EILIKTAANMRAAPTSSCSSPIL*IEKLMS Trigger: TGACATCAGTTTCTCTATCCACAGAATGGGGCTAGA...GCAGCTGGAGGTGGGCGCTGCACGCATGTTGGCTGCTGTCTTTATCAAAATTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000592035.5 |
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| CDS-3UTR CCA 90 bp | AAAAAGCTGCCACCTCTAAGAAATTTTGATAAAGACAGCAGCCAACATGCGTGCCAGAGTGAGCCTAGGTaGGAGGATCCACCTTGGTGC | + |
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Preference number: 4 (lower is better) Translates to: KKLPPLRNFDKDSSQHACQSEPR*EDPPWC Trigger: GCACCAAGGTGGATCCTCCCACCTAGGCTCACTCTG...GCACGCATGTTGGCTGCTGTCTTTATCAAAATTTCTTAGAGGTGGCAGCTTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000592035.5 |
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| CDS-3UTR GCA 90 bp | AGCTGCTGCCAGGTACTAAGCTCATCCCATGTATCTAGCCCCATTCTGTGGATACCCCTCACTCAGTTCTaGCATAAGTCTTCCAATCAT | + |
|
Preference number: 4 (lower is better) Translates to: SCCQVLSSSHVSSPILWIPLTQF*HKSSNH Trigger: ATGATTGGAAGACTTATGGCAGAACTGAGTGAGGGG...TATCCACAGAATGGGGCTAGATACATGGGATGAGCTTAGTACCTGGCAGCAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000592035.5 |
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| CDS GCA 90 bp | AGCTCGAGAAGCCTGCCGCCCCGTTCACCGCCGCGGCCGCCATCTTaGGTGATGCGGCAAGCAGACCGCCTGATTTACGGCAGCGCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: SSRSLPPRSPPRPPS*VMRQADRLIYGSAA Trigger: GGCGGCGCTGCCGTAAATCAGGCGGTCTGCTTGCCGCATCACGCAAGATGGCGGCCGCGGCGGTGAACGGGGCGGCAGGCTTCTCGAGCT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000215071.9 ENST00000620216.4 |
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| CDS CCA 90 bp | CAAATCTTTCACCCCATCGGATCCCCCAGCCCGCCTCAGTCTCGCTaGCACCGAGGTGGCTTCCGCGGCCCGGGACTTGGTTGGGTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: QIFHPIGSPSPPQSR*HRGGFRGPGLGWVQ Trigger: CTGGACCCAACCAAGTCCCGGGCCGCGGAAGCCACCTCGGTGCCAGCGAGACTGAGGCGGGCTGGGGGATCCGATGGGGTGAAAGATTTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000592035.5 |
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| CDS-3UTR CAA 90 bp | CTGGTCCCAGCCCTCCTCCTGCAACACCAAGCGTTGCTCGTGCTCAAACGCCTGTCCGCGGCCCGGGACTaGGTTGGGTCCAGACACCTC | + |
|
Preference number: 5 (lower is better) Translates to: LVPALLLQHQALLVLKRLSAARD*VGSRHL Trigger: GAGGTGTCTGGACCCAACCAAGTCCCGGGCCGCGGA...CAGGCGTTTGAGCACGAGCAACGCTTGGTGTTGCAGGAGGAGGGCTGGGACCAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592035.5 |
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| CDS-3UTR CAA 90 bp | GACAGCAGCCAACATGCGTGCAGCGCCCACCTCCAGCTGCTGCCAGGTACTAAGTCCCTCTCTCGCTTCTaGACGCCCTCCGAGCCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: DSSQHACSAHLQLLPGTKSLSRF*TPSEPP Trigger: TGGGGGCTCGGAGGGCGTCAAGAAGCGAGAGAGGGA...CTTAGTACCTGGCAGCAGCTGGAGGTGGGCGCTGCACGCATGTTGGCTGCTGTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000592035.5 |
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| CDS-3UTR CAA 90 bp | CTGGTCCCAGCCCTCCTCCTGCAACACCAAGCGTTGCTCGTGCTCAAACGCCTGCTGCAACACCAAGCGTaGCTCGTGCTCAAACGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: LVPALLLQHQALLVLKRLLQHQA*LVLKRL Trigger: CAGGCGTTTGAGCACGAGCAACGCTTGGTGTTGCAG...CAGGCGTTTGAGCACGAGCAACGCTTGGTGTTGCAGGAGGAGGGCTGGGACCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592035.5 |
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| CDS-3UTR CAA 90 bp | ACAGCAGCCAACATGCGTGCAGCGCCCACCTCCAGCTGCTGCCAGGTACTAAGCTTGCTCAGGCTGATCTaGAACTCCTGGGCTCAAGCG | + |
|
Preference number: 5 (lower is better) Translates to: TAANMRAAPTSSCCQVLSLLRLI*NSWAQA Trigger: CGCTTGAGCCCAGGAGTTCAAGATCAGCCTGAGCAA...GCTTAGTACCTGGCAGCAGCTGGAGGTGGGCGCTGCACGCATGTTGGCTGCTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592035.5 |
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| CDS-3UTR CAA 90 bp | ACAGCAGCCAACATGCGTGCAGCGCCCACCTCCAGCTGCTGCCAGGTACTAAGCGTCCTCACTTCCCACTaGGTCTTGCCTGGAATCCAC | + |
|
Preference number: 5 (lower is better) Translates to: TAANMRAAPTSSCCQVLSVLTSH*VLPGIH Trigger: GTGGATTCCAGGCAAGACCAAGTGGGAAGTGAGGAC...GCTTAGTACCTGGCAGCAGCTGGAGGTGGGCGCTGCACGCATGTTGGCTGCTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592035.5 |
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| CDS-3UTR CAA 90 bp | CTCCTCCTGCAACACCAAGCGTTGCTCGTGCTCAAACGCCTGAGACCAAATGAAGTGGGAGGATCCACCTaGGTGCGCGGGAGCCACTGC | + |
|
Preference number: 5 (lower is better) Translates to: LLLQHQALLVLKRLRPNEVGGST*VRGSHC Trigger: GCAGTGGCTCCCGCGCACCAAGGTGGATCCTCCCAC...TTCATTTGGTCTCAGGCGTTTGAGCACGAGCAACGCTTGGTGTTGCAGGAGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592035.5 |
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| CDS CCA 90 bp | TCGAGGTGGCGCCCTCGGAGCCCTGCCCTTAATGAACATGTCAGTTaGAGCTCCGCCTCTGTCGTCACTCAAGATGGTGACCGGAAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SRWRPRSPALNEHVS*SSASVVTQDGDRKL Trigger: CAACTTCCGGTCACCATCTTGAGTGACGACAGAGGCGGAGCTCCAACTGACATGTTCATTAAGGGCAGGGCTCCGAGGGCGCCACCTCGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000620216.4 |
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| CDS-3UTR CAA 90 bp | AGCTGCTGCCAGGTACTAAGCTCATCCCATGTATCTAGCCCCATTCTGTGGATATGGTCCCACGGCCCCTaGCCCTGTACCCCAGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: SCCQVLSSSHVSSPILWIWSHGP*PCTPAT Trigger: GGTGGCTGGGGTACAGGGCAAGGGGCCGTGGGACCA...TATCCACAGAATGGGGCTAGATACATGGGATGAGCTTAGTACCTGGCAGCAGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000592035.5 |
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| CDS-3UTR CAA 90 bp | ACAGCAGCCAACATGCGTGCAGCGCCCACCTCCAGCTGCTGCCAGGTACTAAGCAGCCACCCCACACTGTaGTTAGTGACTTCACCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: TAANMRAAPTSSCCQVLSSHPTL*LVTSPL Trigger: AAGGGGTGAAGTCACTAACAACAGTGTGGGGTGGCT...GCTTAGTACCTGGCAGCAGCTGGAGGTGGGCGCTGCACGCATGTTGGCTGCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000592035.5 |
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| CDS GCA 90 bp | GGGCTAAGACAGGCCGCACAATCCCTGCCTGCTGAACCAATTCCATaGTCAGGTTTGACACACGTGGCCACACATGTCAACAGCCAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: GLRQAAQSLPAEPIP*SGLTHVATHVNSQG Trigger: CCCTTGGCTGTTGACATGTGTGGCCACGTGTGTCAAACCTGAGCATGGAATTGGTTCAGCAGGCAGGGATTGTGCGGCCTGTCTTAGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590331.1 |
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| CDS TCA 90 bp | AGGCCGCACAATCCCTGCCTGCTGAACCAATTCCATGCTCAGGTTTaGCACACGTGGCCACACATGTCAACAGCCAAGGGTGGTGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: RPHNPCLLNQFHAQV*HTWPHMSTAKGGEM Trigger: CATCTCACCACCCTTGGCTGTTGACATGTGTGGCCACGTGTGTCAAACCTGAGCATGGAATTGGTTCAGCAGGCAGGGATTGTGCGGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590331.1 |
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| CDS-3UTR CAA 90 bp | AAAGACAGCAGCCAACATGCGTGCAGCGCCCACCTCCAGCTGCTGCCAGGTACTCCTAGAGTCACACAGTaGAACTTAAACCTGGGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: KDSSQHACSAHLQLLPGTPRVTQ*NLNLGS Trigger: ACTGCCCAGGTTTAAGTTCAACTGTGTGACTCTAGG...AGTACCTGGCAGCAGCTGGAGGTGGGCGCTGCACGCATGTTGGCTGCTGTCTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592035.5 |
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| CDS CCA 90 bp | TCTTTTATCACTCCGGGCAGTCCTCACTTCCCACTTGGTCTTGCCTaGAATCCACCATCAGGAAAAGCCCGAATCCCAATCCTGCCACTC | + |
|
Preference number: 5 (lower is better) Translates to: SFITPGSPHFPLGLA*NPPSGKARIPILPL Trigger: GAGTGGCAGGATTGGGATTCGGGCTTTTCCTGATGGTGGATTCCAGGCAAGACCAAGTGGGAAGTGAGGACTGCCCGGAGTGATAAAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000592035.5 |
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| CDS-3UTR CAA 90 bp | ACGGAAGATGGGCTAAGACAGGCCGCACAATCCCTGCCTGCTGAACCAATTCCAATTCCATGCTCAGGTTaGACACACGTGGCCACACAT | + |
|
Preference number: 5 (lower is better) Translates to: TEDGLRQAAQSLPAEPIPIPCSG*THVATH Trigger: ATGTGTGGCCACGTGTGTCAAACCTGAGCATGGAAT...TGGAATTGGTTCAGCAGGCAGGGATTGTGCGGCCTGTCTTAGCCCATCTTCCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590331.1 |
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| CDS GCA 90 bp | TCATTCTTTTATCACTCCGGGCAGTCCTCACTTCCCACTTGGTCTTaGCTGGAATCCACCATCAGGAAAAGCCCGAATCCCAATCCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: SFFYHSGQSSLPTWS*LESTIRKSPNPNPA Trigger: GGCAGGATTGGGATTCGGGCTTTTCCTGATGGTGGATTCCAGGCAAGACCAAGTGGGAAGTGAGGACTGCCCGGAGTGATAAAAGAATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000592035.5 |
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| CDS CCA 90 bp | TCAGCCTCATTCTTTTATCACTCCGGGCAGTCCTCACTTCCCACTTaGTCTTGCCTGGAATCCACCATCAGGAAAAGCCCGAATCCCAAT | + |
|
Preference number: 5 (lower is better) Translates to: SASFFYHSGQSSLPT*SCLESTIRKSPNPN Trigger: ATTGGGATTCGGGCTTTTCCTGATGGTGGATTCCAGGCAAGACCAAGTGGGAAGTGAGGACTGCCCGGAGTGATAAAAGAATGAGGCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000592035.5 |
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| CDS TCA 90 bp | TATCCACAATCCCATGACCAGGCCCAATTCACTGAAAAGGAGAGCTaGGGTGCTAGGAGGATAAGAAACACACCTAGCCTACCCAGACAA | + |
|
Preference number: 5 (lower is better) Translates to: YPQSHDQAQFTEKES*GARRIRNTPSLPRQ Trigger: TTGTCTGGGTAGGCTAGGTGTGTTTCTTATCCTCCTAGCACCTCAGCTCTCCTTTTCAGTGAATTGGGCCTGGTCATGGGATTGTGGATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000592001.5 |
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| CDS-3UTR CAA 90 bp | AAAAAGCTGCCACCTCTAAGAAATTTTGATAAAGACAGCAGCCAACATGCGTGCCTCCGAGCCCCCACTTaGGCTGTTCCAAATCTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: KKLPPLRNFDKDSSQHACLRAPT*AVPNLS Trigger: TGAAAGATTTGGAACAGCCAAAGTGGGGGCTCGGAG...GCACGCATGTTGGCTGCTGTCTTTATCAAAATTTCTTAGAGGTGGCAGCTTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000592035.5 |
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| CDS CCA 72 bp | CAGCCCGCCCCGGGTAGCCCGCCGTCGCTCTCGAGGTaGCGCCCTCGGAGCCCTGCCCTTAATGAACATGTC | + |
|
Preference number: 6 (lower is better) Translates to: QPAPGSPPSLSR*RPRSPALNEHV Trigger: GACATGTTCATTAAGGGCAGGGCTCCGAGGGCGCCACCTCGAGAGCGACGGCGGGCTACCCGGGGCGGGCTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000215071.9 ENST00000620216.4 |
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| CDS CCA 72 bp | ATCCCCCAGCCCGCCTCAGTCTCGCTGGCACCGAGGTaGCTTCCGCGGCCCGGGACTTGGTTGGGTCCAGAC | + |
|
Preference number: 6 (lower is better) Translates to: IPQPASVSLAPR*LPRPGTWLGPD Trigger: GTCTGGACCCAACCAAGTCCCGGGCCGCGGAAGCCACCTCGGTGCCAGCGAGACTGAGGCGGGCTGGGGGAT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000592035.5 |
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| CDS CAA 90 bp | GAGCTCGAGAAGCCTGCCGCCCCGTTCACCGCCGCGGCCGCCATCTaGCGTGATGCGGCAAGCAGACCGCCTGATTTACGGCAGCGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: ELEKPAAPFTAAAAI*RDAASRPPDLRQRR Trigger: GCGGCGCTGCCGTAAATCAGGCGGTCTGCTTGCCGCATCACGCAAGATGGCGGCCGCGGCGGTGAACGGGGCGGCAGGCTTCTCGAGCTC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000215071.9 ENST00000620216.4 |
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| CDS CAA 72 bp | GACCGCCTGATTTACGGCAGCGCCGCCTACAAACGCTaGCCCGGCGGAAGTGGGGCCGAGAGGTGGAGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: DRLIYGSAAYKR*PGGSGAERWSP Trigger: TGGGCTCCACCTCTCGGCCCCACTTCCGCCGGGCAAGCGTTTGTAGGCGGCGCTGCCGTAAATCAGGCGGTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000215071.9 ENST00000620216.4 |
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| CDS CAA 72 bp | AAGCCTGCCGCCCCGTTCACCGCCGCGGCCGCCATCTaGCGTGATGCGGCAAGCAGACCGCCTGATTTACGG | + |
|
Preference number: 6 (lower is better) Translates to: KPAAPFTAAAAI*RDAASRPPDLR Trigger: CCGTAAATCAGGCGGTCTGCTTGCCGCATCACGCAAGATGGCGGCCGCGGCGGTGAACGGGGCGGCAGGCTT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000215071.9 ENST00000620216.4 |
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| CDS CCA 72 bp | CTCTCTCGCTTCTTGACGCCCTCCGAGCCCCCACTTTaGCTGTTCCAAATCTTTCACCCCATCGGATCCCCC | + |
|
Preference number: 6 (lower is better) Translates to: LSRFLTPSEPPL*LFQIFHPIGSP Trigger: GGGGGATCCGATGGGGTGAAAGATTTGGAACAGCCAAAGTGGGGGCTCGGAGGGCGTCAAGAAGCGAGAGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000591250.1 ENST00000592035.5 |
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| CDS CAA 72 bp | CCTCTCTCGCTTCTTGACGCCCTCCGAGCCCCCACTTaGGCTGTTCCAAATCTTTCACCCCATCGGATCCCC | + |
|
Preference number: 6 (lower is better) Translates to: PLSLLDALRAPT*AVPNLSPHRIP Trigger: GGGGATCCGATGGGGTGAAAGATTTGGAACAGCCAAAGTGGGGGCTCGGAGGGCGTCAAGAAGCGAGAGAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000591250.1 ENST00000592035.5 |
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| CDS CAA 90 bp | GATTACAGGCGTGACCATCAACGCTCCCTGTCCCTCTCTCGCTTCTaGACGCCCTCCGAGCCCCCACTTTGGCTGTTCCAAATCTTTCAC | + |
|
Preference number: 6 (lower is better) Translates to: DYRRDHQRSLSLSRF*TPSEPPLWLFQIFH Trigger: GTGAAAGATTTGGAACAGCCAAAGTGGGGGCTCGGAGGGCGTCAAGAAGCGAGAGAGGGACAGGGAGCGTTGATGGTCACGCCTGTAATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000591250.1 ENST00000592035.5 |
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| CDS TCA 72 bp | AGATGGGCTAAGACAGGCCGCACAATCCCTGCCTGCTaGACCAATTCCATGCTCAGGTTTGACACACGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: RWAKTGRTIPAC*TNSMLRFDTRG Trigger: GCCACGTGTGTCAAACCTGAGCATGGAATTGGTTCAGCAGGCAGGGATTGTGCGGCCTGTCTTAGCCCATCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590331.1 |
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| CDS GCA 72 bp | CAGGCCGCACAATCCCTGCCTGCTGAACCAATTCCATaGTCAGGTTTGACACACGTGGCCACACATGTCAAC | + |
|
Preference number: 6 (lower is better) Translates to: QAAQSLPAEPIP*SGLTHVATHVN Trigger: GTTGACATGTGTGGCCACGTGTGTCAAACCTGAGCATGGAATTGGTTCAGCAGGCAGGGATTGTGCGGCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590331.1 |
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| CDS GCA 72 bp | TATCACTCCGGGCAGTCCTCACTTCCCACTTGGTCTTaGCTGGAATCCACCATCAGGAAAAGCCCGAATCCC | + |
|
Preference number: 6 (lower is better) Translates to: YHSGQSSLPTWS*LESTIRKSPNP Trigger: GGGATTCGGGCTTTTCCTGATGGTGGATTCCAGGCAAGACCAAGTGGGAAGTGAGGACTGCCCGGAGTGATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000592035.5 |
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| CDS TCA 72 bp | ACACACCTAGCCTACCCAGACAACCAATGGCTGGAATaGGATTCAGACTCGGAGCTGTCCGACTCAAGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: THLAYPDNQWLE*DSDSELSDSSP Trigger: TGGGCTTGAGTCGGACAGCTCCGAGTCTGAATCTCATTCCAGCCATTGGTTGTCTGGGTAGGCTAGGTGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592001.5 |
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| CDS GCA 72 bp | GGAATCCACCATCAGGAAAAGCCCGAATCCCAATCCTaGCACTCCGACCAGTTAAGCCTCCACGCACCAAAA | + |
|
Preference number: 6 (lower is better) Translates to: GIHHQEKPESQS*HSDQLSLHAPK Trigger: TTTTGGTGCGTGGAGGCTTAACTGGTCGGAGTGGCAGGATTGGGATTCGGGCTTTTCCTGATGGTGGATTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000592035.5 |
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| CDS CAA 72 bp | CAATCCCTGCCTGCTGAACCAATTCCATGCTCAGGTTaGACACACGTGGCCACACATGTCAACAGCCAAGGG | + |
|
Preference number: 6 (lower is better) Translates to: QSLPAEPIPCSG*THVATHVNSQG Trigger: CCCTTGGCTGTTGACATGTGTGGCCACGTGTGTCAAACCTGAGCATGGAATTGGTTCAGCAGGCAGGGATTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590331.1 |
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| CDS CAA 72 bp | TTATCACTCCGGGCAGTCCTCACTTCCCACTTGGTCTaGCCTGGAATCCACCATCAGGAAAAGCCCGAATCC | + |
|
Preference number: 6 (lower is better) Translates to: LSLRAVLTSHLV*PGIHHQEKPES Trigger: GGATTCGGGCTTTTCCTGATGGTGGATTCCAGGCAAGACCAAGTGGGAAGTGAGGACTGCCCGGAGTGATAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000592035.5 |
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| CDS TCA 72 bp | AATCCCTGCCTGCTGAACCAATTCCATGCTCAGGTTTaGCACACGTGGCCACACATGTCAACAGCCAAGGGT | + |
|
Preference number: 6 (lower is better) Translates to: NPCLLNQFHAQV*HTWPHMSTAKG Trigger: ACCCTTGGCTGTTGACATGTGTGGCCACGTGTGTCAAACCTGAGCATGGAATTGGTTCAGCAGGCAGGGATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590331.1 |
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| CDS CAA 90 bp | CTCATTCTTTTATCACTCCGGGCAGTCCTCACTTCCCACTTGGTCTaGCCTGGAATCCACCATCAGGAAAAGCCCGAATCCCAATCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: LILLSLRAVLTSHLV*PGIHHQEKPESQSC Trigger: GCAGGATTGGGATTCGGGCTTTTCCTGATGGTGGATTCCAGGCAAGACCAAGTGGGAAGTGAGGACTGCCCGGAGTGATAAAAGAATGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000592035.5 |
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| CDS CAA 90 bp | TTCAGCCTCATTCTTTTATCACTCCGGGCAGTCCTCACTTCCCACTaGGTCTTGCCTGGAATCCACCATCAGGAAAAGCCCGAATCCCAA | + |
|
Preference number: 6 (lower is better) Translates to: FSLILLSLRAVLTSH*VLPGIHHQEKPESQ Trigger: TTGGGATTCGGGCTTTTCCTGATGGTGGATTCCAGGCAAGACCAAGTGGGAAGTGAGGACTGCCCGGAGTGATAAAAGAATGAGGCTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000592035.5 |
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| CDS CAA 72 bp | ATTCTTTTATCACTCCGGGCAGTCCTCACTTCCCACTaGGTCTTGCCTGGAATCCACCATCAGGAAAAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: ILLSLRAVLTSH*VLPGIHHQEKP Trigger: GGGCTTTTCCTGATGGTGGATTCCAGGCAAGACCAAGTGGGAAGTGAGGACTGCCCGGAGTGATAAAAGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000592035.5 |
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| CDS CAA 90 bp | CCCATTCTGTGGATAGAGAAACTGATGTCAGAGAGCTTTGGCAGCTaGCCTAGAGTCACACAGTTGAACTTAAACCTGGGCAGTCTTGTT | + |
|
Preference number: 6 (lower is better) Translates to: PILWIEKLMSESFGS*PRVTQLNLNLGSLV Trigger: AACAAGACTGCCCAGGTTTAAGTTCAACTGTGTGACTCTAGGCAAGCTGCCAAAGCTCTCTGACATCAGTTTCTCTATCCACAGAATGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592035.5 |
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