Pregenerated sensors for PSMD14 (Homo sapiens)
Ensembl gene IDs: ENSG00000115233Ensembl transcript IDs: ENST00000409682.8, ENST00000477232.5, ENST00000478123.5, ENST00000492908.1
Found 25 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | ACAACCACTGCCACAGCTCTCTCCGACAAGGCTTCAAAGCTCTGCTaGGTGTTGATATCCACACCAGAAAGCCAACAACCAAAGCCAGGG | + |
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Preference number: 5 (lower is better) Translates to: TTTATALSDKASKLC*VLISTPESQQPKPG Trigger: CCCTGGCTTTGGTTGTTGGCTTTCTGGTGTGGATATCAACACTCAGCAGAGCTTTGAAGCCTTGTCGGAGAGAGCTGTGGCAGTGGTTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000409682.8 |
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| CDS TCA 90 bp | GGAGGTGAGATGGTGGTGGCAGAAAGCAGGGAACCAAAATCCCAGTaGGGGTTAGATTTGGATACTCTGAACTTTATAATCTCACAGCTG | + |
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Preference number: 5 (lower is better) Translates to: GGEMVVAESREPKSQ*GLDLDTLNFIISQL Trigger: CAGCTGTGAGATTATAAAGTTCAGAGTATCCAAATCTAACCCTCACTGGGATTTTGGTTCCCTGCTTTCTGCCACCACCATCTCACCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000492908.1 |
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| CDS CCA 90 bp | CTGTTACTGAATTCTTCAGGAGATGGGAGATGGAAGTACCTGAGGTaGCACTTACGGCACTGTGGTACTAATTCTGTTCTGTTGCTCTCT | + |
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Preference number: 5 (lower is better) Translates to: LLLNSSGDGRWKYLR*HLRHCGTNSVLLLS Trigger: AGAGAGCAACAGAACAGAATTAGTACCACAGTGCCGTAAGTGCCACCTCAGGTACTTCCATCTCCCATCTCCTGAAGAATTCAGTAACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492908.1 |
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| CDS CCA 90 bp | GATTGTGTTGACCATTTGCAAACTGTTACTGAATTCTTCAGGAGATaGGAGATGGAAGTACCTGAGGTGGCACTTACGGCACTGTGGTAC | + |
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Preference number: 5 (lower is better) Translates to: DCVDHLQTVTEFFRR*EMEVPEVALTALWY Trigger: GTACCACAGTGCCGTAAGTGCCACCTCAGGTACTTCCATCTCCCATCTCCTGAAGAATTCAGTAACAGTTTGCAAATGGTCAACACAATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492908.1 |
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| CDS TCA 90 bp | AAGCCCAGCCCTGTCACATCAATTACACCACCACAGTACTTGAAATaGCAACAAAATTACAGCCAGCAAGGCACTTGCCCACATATTCTC | + |
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Preference number: 5 (lower is better) Translates to: KPSPVTSITPPQYLK*QQNYSQQGTCPHIL Trigger: GAGAATATGTGGGCAAGTGCCTTGCTGGCTGTAATTTTGTTGTCATTTCAAGTACTGTGGTGGTGTAATTGATGTGACAGGGCTGGGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477232.5 |
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| CDS CCA 90 bp | TTGACCATTTGCAAACTGTTACTGAATTCTTCAGGAGATGGGAGATaGAAGTACCTGAGGTGGCACTTACGGCACTGTGGTACTAATTCT | + |
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Preference number: 5 (lower is better) Translates to: LTICKLLLNSSGDGR*KYLRWHLRHCGTNS Trigger: AGAATTAGTACCACAGTGCCGTAAGTGCCACCTCAGGTACTTCCATCTCCCATCTCCTGAAGAATTCAGTAACAGTTTGCAAATGGTCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492908.1 |
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| CDS GCA 90 bp | TCTTTGGCTAACTACAAAAAGGCTTGTAGTTTACACACAAGGAAATaGTCAAGAGACTATATACTAACCTGGCCCAGTCCAGGCATACCT | + |
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Preference number: 5 (lower is better) Translates to: SLANYKKACSLHTRK*SRDYILTWPSPGIP Trigger: AGGTATGCCTGGACTGGGCCAGGTTAGTATATAGTCTCTTGAGCATTTCCTTGTGTGTAAACTACAAGCCTTTTTGTAGTTAGCCAAAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000478123.5 |
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| CDS TCA 90 bp | AAGCGTTTCTCCATGTTTGTGTATTTACAGCATGATGCAATAGAATaGCAGCAAAATGGTCACTCCATGGTTAAGAACAGAAATCTTAGA | + |
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Preference number: 5 (lower is better) Translates to: KRFSMFVYLQHDAIE*QQNGHSMVKNRNLR Trigger: TCTAAGATTTCTGTTCTTAACCATGGAGTGACCATTTTGCTGTCATTCTATTGCATCATGCTGTAAATACACAAACATGGAGAAACGCTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477232.5 |
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| CDS TCA 90 bp | ATGGTCACTCCATGGTTAAGAACAGAAATCTTAGATATAACACACTaGACAAAGAACTCCCAAGAATTAATTAATGTATGGGTTGGTAGG | + |
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Preference number: 5 (lower is better) Translates to: MVTPWLRTEILDITH*TKNSQELINVWVGR Trigger: CCTACCAACCCATACATTAATTAATTCTTGGGAGTTCTTTGTTCAGTGTGTTATATCTAAGATTTCTGTTCTTAACCATGGAGTGACCAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477232.5 |
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| CDS TCA 72 bp | GCCACAGCTCTCTCCGACAAGGCTTCAAAGCTCTGCTaGGTGTTGATATCCACACCAGAAAGCCAACAACCA | + |
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Preference number: 6 (lower is better) Translates to: ATALSDKASKLC*VLISTPESQQP Trigger: TGGTTGTTGGCTTTCTGGTGTGGATATCAACACTCAGCAGAGCTTTGAAGCCTTGTCGGAGAGAGCTGTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000409682.8 |
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| CDS TCA 72 bp | CTCTCTCCGACAAGGCTTCAAAGCTCTGCTGAGTGTTaGTATCCACACCAGAAAGCCAACAACCAAAGCCAG | + |
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Preference number: 6 (lower is better) Translates to: LSPTRLQSSAEC*YPHQKANNQSQ Trigger: CTGGCTTTGGTTGTTGGCTTTCTGGTGTGGATATCAACACTCAGCAGAGCTTTGAAGCCTTGTCGGAGAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000409682.8 |
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| CDS CCA 72 bp | AATTCTTCAGGAGATGGGAGATGGAAGTACCTGAGGTaGCACTTACGGCACTGTGGTACTAATTCTGTTCTG | + |
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Preference number: 6 (lower is better) Translates to: NSSGDGRWKYLR*HLRHCGTNSVL Trigger: CAGAACAGAATTAGTACCACAGTGCCGTAAGTGCCACCTCAGGTACTTCCATCTCCCATCTCCTGAAGAATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492908.1 |
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| CDS CAA 90 bp | TACCTGAGGTGGCACTTACGGCACTGTGGTACTAATTCTGTTCTGTaGCTCTCTCCTTTTCCTATTTGCACAGTTCTTTCCCAATTTCCC | + |
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Preference number: 6 (lower is better) Translates to: YLRWHLRHCGTNSVL*LSPFPICTVLSQFP Trigger: GGGAAATTGGGAAAGAACTGTGCAAATAGGAAAAGGAGAGAGCAACAGAACAGAATTAGTACCACAGTGCCGTAAGTGCCACCTCAGGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492908.1 |
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| CDS CAA 72 bp | TGGCACTTACGGCACTGTGGTACTAATTCTGTTCTGTaGCTCTCTCCTTTTCCTATTTGCACAGTTCTTTCC | + |
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Preference number: 6 (lower is better) Translates to: WHLRHCGTNSVL*LSPFPICTVLS Trigger: GGAAAGAACTGTGCAAATAGGAAAAGGAGAGAGCAACAGAACAGAATTAGTACCACAGTGCCGTAAGTGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492908.1 |
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| CDS TCA 72 bp | ATGGTGGTGGCAGAAAGCAGGGAACCAAAATCCCAGTaGGGGTTAGATTTGGATACTCTGAACTTTATAATC | + |
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Preference number: 6 (lower is better) Translates to: MVVAESREPKSQ*GLDLDTLNFII Trigger: GATTATAAAGTTCAGAGTATCCAAATCTAACCCTCACTGGGATTTTGGTTCCCTGCTTTCTGCCACCACCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000492908.1 |
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| CDS TCA 72 bp | AAAAGCCCTAGTGAGCACTCGATGGTGTGTATAAGCTaGAAGCGTTTCTCCATGTTTGTGTATTTACAGCAT | + |
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Preference number: 6 (lower is better) Translates to: KSPSEHSMVCIS*KRFSMFVYLQH Trigger: ATGCTGTAAATACACAAACATGGAGAAACGCTTTCAGCTTATACACACCATCGAGTGCTCACTAGGGCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477232.5 |
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| CDS TCA 72 bp | TCAGTGGCACTTAGGATCAAAGGAGCTACCGACTTTTaGTCCACTAAACAAATCACATGGGTTTCTCTCTTA | + |
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Preference number: 6 (lower is better) Translates to: SVALRIKGATDF*STKQITWVSLL Trigger: TAAGAGAGAAACCCATGTGATTTGTTTAGTGGATCAAAAGTCGGTAGCTCCTTTGATCCTAAGTGCCACTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492908.1 |
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| CDS CAA 72 bp | CTGCCTATTTCATACACTCAGTCTTTAATAGCACCTTaGGTCTATGCGCAACTCACAGATCAAAACAGAGGA | + |
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Preference number: 6 (lower is better) Translates to: LPISYTQSLIAP*VYAQLTDQNRG Trigger: TCCTCTGTTTTGATCTGTGAGTTGCGCATAGACCAAAGGTGCTATTAAAGACTGAGTGTATGAAATAGGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477232.5 |
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| CDS CAA 90 bp | ACCACAGTACTTGAAATGACAACAAAATTACAGCCAGCAAGGCACTaGCCCACATATTCTCTTCTAGTCAGATACCTTTTACTTCTTGTG | + |
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Preference number: 6 (lower is better) Translates to: TTVLEMTTKLQPARH*PTYSLLVRYLLLLV Trigger: CACAAGAAGTAAAAGGTATCTGACTAGAAGAGAATATGTGGGCAAGTGCCTTGCTGGCTGTAATTTTGTTGTCATTTCAAGTACTGTGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000477232.5 |
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| CDS CAA 72 bp | CCTTTTACTTCTTGTGACTATGAAAGACTTTATACCTaGTCTGATGGCCTTAAATGTCCAAGCCACTGTCAA | + |
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Preference number: 6 (lower is better) Translates to: PFTSCDYERLYT*SDGLKCPSHCQ Trigger: TTGACAGTGGCTTGGACATTTAAGGCCATCAGACAAGGTATAAAGTCTTTCATAGTCACAAGAAGTAAAAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477232.5 |
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| CDS CAA 72 bp | CTTGAAATGACAACAAAATTACAGCCAGCAAGGCACTaGCCCACATATTCTCTTCTAGTCAGATACCTTTTA | + |
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Preference number: 6 (lower is better) Translates to: LEMTTKLQPARH*PTYSLLVRYLL Trigger: TAAAAGGTATCTGACTAGAAGAGAATATGTGGGCAAGTGCCTTGCTGGCTGTAATTTTGTTGTCATTTCAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000477232.5 |
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| CDS TCA 72 bp | AAATTCCTTTCCATGCTGAAGGCCTACACAATACATTaGATCTCTATTCACCCGCCTGACCATTTAATTTTT | + |
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Preference number: 6 (lower is better) Translates to: KFLSMLKAYTIH*ISIHPPDHLIF Trigger: AAAAATTAAATGGTCAGGCGGGTGAATAGAGATTCAATGTATTGTGTAGGCCTTCAGCATGGAAAGGAATTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477232.5 |
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| CDS TCA 72 bp | TCCATGTTTGTGTATTTACAGCATGATGCAATAGAATaGCAGCAAAATGGTCACTCCATGGTTAAGAACAGA | + |
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Preference number: 6 (lower is better) Translates to: SMFVYLQHDAIE*QQNGHSMVKNR Trigger: TCTGTTCTTAACCATGGAGTGACCATTTTGCTGTCATTCTATTGCATCATGCTGTAAATACACAAACATGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477232.5 |
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| CDS GCA 72 bp | TTCATACACTCAGTCTTTAATAGCACCTTTGGTCTATaGGCAACTCACAGATCAAAACAGAGGACTAAAATA | + |
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Preference number: 6 (lower is better) Translates to: FIHSVFNSTFGL*ATHRSKQRTKI Trigger: TATTTTAGTCCTCTGTTTTGATCTGTGAGTTGCGCATAGACCAAAGGTGCTATTAAAGACTGAGTGTATGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000477232.5 |
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| CDS CAA 72 bp | CACACACCACTTTCTGTTATCAGACAAATTTGTGAATaGTACACATTATACTCCAGATCAACAAACTGTGAT | + |
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Preference number: 6 (lower is better) Translates to: HTPLSVIRQICE*YTLYSRSTNCD Trigger: ATCACAGTTTGTTGATCTGGAGTATAATGTGTACAATTCACAAATTTGTCTGATAACAGAAAGTGGTGTGTG 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477232.5 |
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