Pregenerated sensors for PSG4 (Homo sapiens)
Ensembl gene IDs: ENSG00000243137Ensembl transcript IDs: ENST00000244295.13, ENST00000405312.8, ENST00000433626.6, ENST00000597374.5
Found 45 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATGGGGAGTCTTGTTCTGACATCTTTGGAAAAACTGTCCACAGTGTaGAGTCATCAACTTGTTATCCTGGTTTACAGTTTGAGTAGCTGT | + |
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Preference number: 1 (lower is better) Translates to: MGSLVLTSLEKLSTV*SHQLVILVYSLSSC Trigger: ACAGCTACTCAAACTGTAAACCAGGATAACAAGTTGATGACTTCACACTGTGGACAGTTTTTCCAAAGATGTCAGAACAAGACTCCCCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000244295.13 ENST00000405312.8 ENST00000433626.6 |
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| 3UTR CAA 90 bp | AGTTGTCCACCTCCAGCTTATAGGGCTTCTGGAACAGAGTGGGTCTaGCTCTTCGTGATTCCATGGGAGAAAATGGAATTGGAGGAACTA | + |
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Preference number: 2 (lower is better) Translates to: SCPPPAYRASGTEWV*LFVIPWEKMELEEL Trigger: TAGTTCCTCCAATTCCATTTTCTCCCATGGAATCACGAAGAGCAAGACCCACTCTGTTCCAGAAGCCCTATAAGCTGGAGGTGGACAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000244295.13 ENST00000405312.8 ENST00000433626.6 |
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| 3UTR-3UTR TCA 90 bp | TTTCCCATGAAATTTACATCGAGTTGTCCACCTCCAGCTTATAGGGCTTCTGGAGGGTCTTGCTCTTCGTaGTTCCATGGGAGAAAATGG | + |
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Preference number: 2 (lower is better) Translates to: FPMKFTSSCPPPAYRASGGSCSS*FHGRKW Trigger: CCATTTTCTCCCATGGAATCACGAAGAGCAAGACCC...TCCAGAAGCCCTATAAGCTGGAGGTGGACAACTCGATGTAAATTTCATGGGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000244295.13 ENST00000405312.8 ENST00000433626.6 |
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| 3UTR-3UTR TCA 90 bp | GATGGGGAGTCTTGTTCTGACATCTTTGGAAAAACTGTCCACAGTGTGAAGTCAGGGTCTTGCTCTTCGTaGTTCCATGGGAGAAAATGG | + |
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Preference number: 2 (lower is better) Translates to: DGESCSDIFGKTVHSVKSGSCSS*FHGRKW Trigger: CCATTTTCTCCCATGGAATCACGAAGAGCAAGACCC...TGACTTCACACTGTGGACAGTTTTTCCAAAGATGTCAGAACAAGACTCCCCATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000244295.13 ENST00000405312.8 ENST00000433626.6 |
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| 3UTR-3UTR TCA 90 bp | GATGGGGAGTCTTGTTCTGACATCTTTGGAAAAACTGTCCACAGTGTGAAGTCACATTTTGGTGAGTTCTaGGTGGCTCACATGTCAGGT | + |
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Preference number: 2 (lower is better) Translates to: DGESCSDIFGKTVHSVKSHFGEF*VAHMSG Trigger: ACCTGACATGTGAGCCACTCAGAACTCACCAAAATG...TGACTTCACACTGTGGACAGTTTTTCCAAAGATGTCAGAACAAGACTCCCCATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000244295.13 ENST00000405312.8 ENST00000433626.6 |
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| 3UTR-3UTR CCA 90 bp | AGTGGCTCACATGTCAGGTACAAGGGTTTTCCCATGAAATTTACATCGAGTTGTGCTTCTGGAACAGAGTaGGTCTTGCTCTTCGTGATT | + |
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Preference number: 2 (lower is better) Translates to: SGSHVRYKGFPMKFTSSCASGTE*VLLFVI Trigger: AATCACGAAGAGCAAGACCCACTCTGTTCCAGAAGC...ACAACTCGATGTAAATTTCATGGGAAAACCCTTGTACCTGACATGTGAGCCACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000244295.13 ENST00000405312.8 ENST00000433626.6 |
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| 3UTR-3UTR CCA 90 bp | GATGGGGAGTCTTGTTCTGACATCTTTGGAAAAACTGTCCACAGTGTGAAGTCACTCTTCGTGATTCCATaGGAGAAAATGGAATTGGAG | + |
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Preference number: 2 (lower is better) Translates to: DGESCSDIFGKTVHSVKSLFVIP*EKMELE Trigger: CTCCAATTCCATTTTCTCCCATGGAATCACGAAGAG...TGACTTCACACTGTGGACAGTTTTTCCAAAGATGTCAGAACAAGACTCCCCATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000244295.13 ENST00000405312.8 ENST00000433626.6 |
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| 3UTR-3UTR CCA 90 bp | ATGAAATTTACATCGAGTTGTCCACCTCCAGCTTATAGGGCTTCTGGAACAGAGCTCTTCGTGATTCCATaGGAGAAAATGGAATTGGAG | + |
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Preference number: 2 (lower is better) Translates to: MKFTSSCPPPAYRASGTELFVIP*EKMELE Trigger: CTCCAATTCCATTTTCTCCCATGGAATCACGAAGAG...CTCTGTTCCAGAAGCCCTATAAGCTGGAGGTGGACAACTCGATGTAAATTTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000244295.13 ENST00000405312.8 ENST00000433626.6 |
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| 3UTR-3UTR CCA 90 bp | AGTGGCTCACATGTCAGGTACAAGGGTTTTCCCATGAAATTTACATCGAGTTGTCTCTTCGTGATTCCATaGGAGAAAATGGAATTGGAG | + |
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Preference number: 2 (lower is better) Translates to: SGSHVRYKGFPMKFTSSCLFVIP*EKMELE Trigger: CTCCAATTCCATTTTCTCCCATGGAATCACGAAGAG...ACAACTCGATGTAAATTTCATGGGAAAACCCTTGTACCTGACATGTGAGCCACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000244295.13 ENST00000405312.8 ENST00000433626.6 |
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| 3UTR CCA 72 bp | TGTCCACCTCCAGCTTATAGGGCTTCTGGAACAGAGTaGGTCTTGCTCTTCGTGATTCCATGGGAGAAAATG | + |
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Preference number: 3 (lower is better) Translates to: CPPPAYRASGTE*VLLFVIPWEKM Trigger: CATTTTCTCCCATGGAATCACGAAGAGCAAGACCCACTCTGTTCCAGAAGCCCTATAAGCTGGAGGTGGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000244295.13 ENST00000405312.8 ENST00000433626.6 |
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| 3UTR-3UTR CAA 90 bp | AGTGAAAGAGGCAGGCATGAGCAAGGACGGTTAAGAGGGGTGGGAGCCTTATCACTTGTTCTGACATCTTaGGAAAAACTGTCCACAGTG | + |
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Preference number: 3 (lower is better) Translates to: SERGRHEQGRLRGVGALSLVLTS*EKLSTV Trigger: CACTGTGGACAGTTTTTCCAAAGATGTCAGAACAAG...TGATAAGGCTCCCACCCCTCTTAACCGTCCTTGCTCATGCCTGCCTCTTTCACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000244295.13 ENST00000405312.8 ENST00000433626.6 |
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| 3UTR TCA 72 bp | AGCTGTTGTTATGGTGTCGAACATTTTGGTGAGTTCTaGGTGGCTCACATGTCAGGTACAAGGGTTTTCCCA | + |
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Preference number: 3 (lower is better) Translates to: SCCYGVEHFGEF*VAHMSGTRVFP Trigger: TGGGAAAACCCTTGTACCTGACATGTGAGCCACTCAGAACTCACCAAAATGTTCGACACCATAACAACAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000244295.13 ENST00000405312.8 ENST00000433626.6 |
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| 3UTR TCA 72 bp | CTTGTTCTGACATCTTTGGAAAAACTGTCCACAGTGTaGAGTCATCAACTTGTTATCCTGGTTTACAGTTTG | + |
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Preference number: 3 (lower is better) Translates to: LVLTSLEKLSTV*SHQLVILVYSL Trigger: CAAACTGTAAACCAGGATAACAAGTTGATGACTTCACACTGTGGACAGTTTTTCCAAAGATGTCAGAACAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000244295.13 ENST00000405312.8 ENST00000433626.6 |
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| CDS-3UTR CCA 90 bp | AGTGAAAGAGGCAGGCATGAGCAAGGACGGTTAAGAGGGGTGGGAGCCTTATCAAGAATATTGTGCCCGTaGGTTAGACTCGGCGAAGCA | + |
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Preference number: 4 (lower is better) Translates to: SERGRHEQGRLRGVGALSRILCP*VRLGEA Trigger: TGCTTCGCCGAGTCTAACCCACGGGCACAATATTCT...TGATAAGGCTCCCACCCCTCTTAACCGTCCTTGCTCATGCCTGCCTCTTTCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000244295.13 ENST00000405312.8 ENST00000433626.6 |
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| CDS-3UTR TCA 90 bp | AGTGAAAGAGGCAGGCATGAGCAAGGACGGTTAAGAGGGGTGGGAGCCTTATCACATTTTGGTGAGTTCTaGGTGGCTCACATGTCAGGT | + |
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Preference number: 4 (lower is better) Translates to: SERGRHEQGRLRGVGALSHFGEF*VAHMSG Trigger: ACCTGACATGTGAGCCACTCAGAACTCACCAAAATG...TGATAAGGCTCCCACCCCTCTTAACCGTCCTTGCTCATGCCTGCCTCTTTCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000244295.13 ENST00000405312.8 ENST00000433626.6 |
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| CDS-3UTR CCA 90 bp | AGTGAAAGAGGCAGGCATGAGCAAGGACGGTTAAGAGGGGTGGGAGCCTTATCAGCTTCTGGAACAGAGTaGGTCTTGCTCTTCGTGATT | + |
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Preference number: 4 (lower is better) Translates to: SERGRHEQGRLRGVGALSASGTE*VLLFVI Trigger: AATCACGAAGAGCAAGACCCACTCTGTTCCAGAAGC...TGATAAGGCTCCCACCCCTCTTAACCGTCCTTGCTCATGCCTGCCTCTTTCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000244295.13 ENST00000405312.8 ENST00000433626.6 |
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| CDS-3UTR TCA 90 bp | GCTGTTGTTATGGTGTCGAACATTTTGGTGAGTTCTGAGTGGCTCACATGTCAGTTAAAAGTGATGCTGTaGGCAGGACCCCCTTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: AVVMVSNILVSSEWLTCQLKVML*AGPPSR Trigger: CCTGGAAGGGGGTCCTGCTCACAGCATCACTTTTAA...CTGACATGTGAGCCACTCAGAACTCACCAAAATGTTCGACACCATAACAACAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000244295.13 ENST00000405312.8 ENST00000433626.6 |
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| CDS-3UTR TCA 90 bp | GGCTTCTGGAACAGAGTGGGTCTTGCTCTTCGTGATTCCATGGGAGAAAATGGACATTTTGGTGAGTTCTaGGTGGCTCACATGTCAGGT | + |
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Preference number: 4 (lower is better) Translates to: GFWNRVGLALRDSMGENGHFGEF*VAHMSG Trigger: ACCTGACATGTGAGCCACTCAGAACTCACCAAAATG...TCCATTTTCTCCCATGGAATCACGAAGAGCAAGACCCACTCTGTTCCAGAAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000244295.13 ENST00000405312.8 ENST00000433626.6 |
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| CDS-3UTR CCA 90 bp | TTTCCCATGAAATTTACATCGAGTTGTCCACCTCCAGCTTATAGGGCTTCTGGAGGGCTTGGACAGCTTTaGGAGGAGATTCAGGGTGAC | + |
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Preference number: 4 (lower is better) Translates to: FPMKFTSSCPPPAYRASGGLGQL*EEIQGD Trigger: GTCACCCTGAATCTCCTCCCAAAGCTGTCCAAGCCC...TCCAGAAGCCCTATAAGCTGGAGGTGGACAACTCGATGTAAATTTCATGGGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000405312.8 |
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| CDS-3UTR TCA 90 bp | ATGAAATTTACATCGAGTTGTCCACCTCCAGCTTATAGGGCTTCTGGAACAGAGTTAAAAGTGATGCTGTaGGCAGGACCCCCTTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: MKFTSSCPPPAYRASGTELKVML*AGPPSR Trigger: CCTGGAAGGGGGTCCTGCTCACAGCATCACTTTTAA...CTCTGTTCCAGAAGCCCTATAAGCTGGAGGTGGACAACTCGATGTAAATTTCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000244295.13 ENST00000405312.8 ENST00000433626.6 |
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| CDS-3UTR TCA 90 bp | TTTCCCATGAAATTTACATCGAGTTGTCCACCTCCAGCTTATAGGGCTTCTGGATTAAAAGTGATGCTGTaGGCAGGACCCCCTTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: FPMKFTSSCPPPAYRASGLKVML*AGPPSR Trigger: CCTGGAAGGGGGTCCTGCTCACAGCATCACTTTTAA...TCCAGAAGCCCTATAAGCTGGAGGTGGACAACTCGATGTAAATTTCATGGGAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000244295.13 ENST00000405312.8 ENST00000433626.6 |
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| CDS-3UTR TCA 90 bp | TTTACATCGAGTTGTCCACCTCCAGCTTATAGGGCTTCTGGAACAGAGTGGGTCTGGGGAGTCTTGTTCTaGCATCTTTGGAAAAACTGT | + |
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Preference number: 4 (lower is better) Translates to: FTSSCPPPAYRASGTEWVWGVLF*HLWKNC Trigger: ACAGTTTTTCCAAAGATGTCAGAACAAGACTCCCCA...GACCCACTCTGTTCCAGAAGCCCTATAAGCTGGAGGTGGACAACTCGATGTAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000244295.13 ENST00000405312.8 ENST00000433626.6 |
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| CDS-3UTR CCA 90 bp | ATGAAATTTACATCGAGTTGTCCACCTCCAGCTTATAGGGCTTCTGGAACAGAGAGAATATTGTGCCCGTaGGTTAGACTCGGCGAAGCA | + |
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Preference number: 4 (lower is better) Translates to: MKFTSSCPPPAYRASGTERILCP*VRLGEA Trigger: TGCTTCGCCGAGTCTAACCCACGGGCACAATATTCT...CTCTGTTCCAGAAGCCCTATAAGCTGGAGGTGGACAACTCGATGTAAATTTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000244295.13 ENST00000405312.8 ENST00000433626.6 |
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| CDS-3UTR TCA 90 bp | ATGAAATTTACATCGAGTTGTCCACCTCCAGCTTATAGGGCTTCTGGAACAGAGCATTTTGGTGAGTTCTaGGTGGCTCACATGTCAGGT | + |
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Preference number: 4 (lower is better) Translates to: MKFTSSCPPPAYRASGTEHFGEF*VAHMSG Trigger: ACCTGACATGTGAGCCACTCAGAACTCACCAAAATG...CTCTGTTCCAGAAGCCCTATAAGCTGGAGGTGGACAACTCGATGTAAATTTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000244295.13 ENST00000405312.8 ENST00000433626.6 |
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| CDS-3UTR CCA 90 bp | GATGGGGAGTCTTGTTCTGACATCTTTGGAAAAACTGTCCACAGTGTGAAGTCAGCTTCTGGAACAGAGTaGGTCTTGCTCTTCGTGATT | + |
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Preference number: 4 (lower is better) Translates to: DGESCSDIFGKTVHSVKSASGTE*VLLFVI Trigger: AATCACGAAGAGCAAGACCCACTCTGTTCCAGAAGC...TGACTTCACACTGTGGACAGTTTTTCCAAAGATGTCAGAACAAGACTCCCCATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000244295.13 ENST00000405312.8 ENST00000433626.6 |
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| CDS-3UTR CCA 90 bp | ATGAAATTTACATCGAGTTGTCCACCTCCAGCTTATAGGGCTTCTGGAACAGAGGCTTCTGGAACAGAGTaGGTCTTGCTCTTCGTGATT | + |
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Preference number: 4 (lower is better) Translates to: MKFTSSCPPPAYRASGTEASGTE*VLLFVI Trigger: AATCACGAAGAGCAAGACCCACTCTGTTCCAGAAGC...CTCTGTTCCAGAAGCCCTATAAGCTGGAGGTGGACAACTCGATGTAAATTTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000244295.13 ENST00000405312.8 ENST00000433626.6 |
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| CDS-3UTR TCA 90 bp | GCTGTTGTTATGGTGTCGAACATTTTGGTGAGTTCTGAGTGGCTCACATGTCAGACAAGGGTTTTCCCATaGAATTTACATCGAGTTGTC | + |
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Preference number: 4 (lower is better) Translates to: AVVMVSNILVSSEWLTCQTRVFP*NLHRVV Trigger: GACAACTCGATGTAAATTTCATGGGAAAACCCTTGT...CTGACATGTGAGCCACTCAGAACTCACCAAAATGTTCGACACCATAACAACAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000244295.13 ENST00000405312.8 ENST00000433626.6 |
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| CDS-3UTR TCA 90 bp | TTTCCCATGAAATTTACATCGAGTTGTCCACCTCCAGCTTATAGGGCTTCTGGATGGGGAGTCTTGTTCTaGCATCTTTGGAAAAACTGT | + |
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Preference number: 4 (lower is better) Translates to: FPMKFTSSCPPPAYRASGWGVLF*HLWKNC Trigger: ACAGTTTTTCCAAAGATGTCAGAACAAGACTCCCCA...TCCAGAAGCCCTATAAGCTGGAGGTGGACAACTCGATGTAAATTTCATGGGAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000244295.13 ENST00000405312.8 ENST00000433626.6 |
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| CDS-3UTR TCA 90 bp | GATGGGGAGTCTTGTTCTGACATCTTTGGAAAAACTGTCCACAGTGTGAAGTCATGGGGAGTCTTGTTCTaGCATCTTTGGAAAAACTGT | + |
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Preference number: 4 (lower is better) Translates to: DGESCSDIFGKTVHSVKSWGVLF*HLWKNC Trigger: ACAGTTTTTCCAAAGATGTCAGAACAAGACTCCCCA...TGACTTCACACTGTGGACAGTTTTTCCAAAGATGTCAGAACAAGACTCCCCATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENST00000244295.13 ENST00000405312.8 ENST00000433626.6 |
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| CDS-3UTR TCA 90 bp | ATGAAATTTACATCGAGTTGTCCACCTCCAGCTTATAGGGCTTCTGGAACAGAGACAAGGGTTTTCCCATaGAATTTACATCGAGTTGTC | + |
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Preference number: 4 (lower is better) Translates to: MKFTSSCPPPAYRASGTETRVFP*NLHRVV Trigger: GACAACTCGATGTAAATTTCATGGGAAAACCCTTGT...CTCTGTTCCAGAAGCCCTATAAGCTGGAGGTGGACAACTCGATGTAAATTTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000244295.13 ENST00000405312.8 ENST00000433626.6 |
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| CDS-3UTR TCA 90 bp | ATGAAATTTACATCGAGTTGTCCACCTCCAGCTTATAGGGCTTCTGGAACAGAGAAACTGTCCACAGTGTaGAGTCATCAACTTGTTATC | + |
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Preference number: 4 (lower is better) Translates to: MKFTSSCPPPAYRASGTEKLSTV*SHQLVI Trigger: GATAACAAGTTGATGACTTCACACTGTGGACAGTTT...CTCTGTTCCAGAAGCCCTATAAGCTGGAGGTGGACAACTCGATGTAAATTTCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000244295.13 ENST00000405312.8 ENST00000433626.6 |
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| CDS-3UTR TCA 90 bp | GATGGGGAGTCTTGTTCTGACATCTTTGGAAAAACTGTCCACAGTGTGAAGTCAAAACTGTCCACAGTGTaGAGTCATCAACTTGTTATC | + |
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Preference number: 4 (lower is better) Translates to: DGESCSDIFGKTVHSVKSKLSTV*SHQLVI Trigger: GATAACAAGTTGATGACTTCACACTGTGGACAGTTT...TGACTTCACACTGTGGACAGTTTTTCCAAAGATGTCAGAACAAGACTCCCCATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000244295.13 ENST00000405312.8 ENST00000433626.6 |
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| CDS-3UTR TCA 90 bp | TTTCCCATGAAATTTACATCGAGTTGTCCACCTCCAGCTTATAGGGCTTCTGGAAAACTGTCCACAGTGTaGAGTCATCAACTTGTTATC | + |
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Preference number: 4 (lower is better) Translates to: FPMKFTSSCPPPAYRASGKLSTV*SHQLVI Trigger: GATAACAAGTTGATGACTTCACACTGTGGACAGTTT...TCCAGAAGCCCTATAAGCTGGAGGTGGACAACTCGATGTAAATTTCATGGGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000244295.13 ENST00000405312.8 ENST00000433626.6 |
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| CDS-3UTR CAA 90 bp | CCTCCAGCTTATAGGGCTTCTGGAACAGAGTGGGTCTTGCTCTTCGTGATTCCAGGAACAGAGTGGGTCTaGCTCTTCGTGATTCCATGG | + |
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Preference number: 5 (lower is better) Translates to: PPAYRASGTEWVLLFVIPGTEWV*LFVIPW Trigger: CCATGGAATCACGAAGAGCAAGACCCACTCTGTTCC...TGGAATCACGAAGAGCAAGACCCACTCTGTTCCAGAAGCCCTATAAGCTGGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000244295.13 ENST00000405312.8 ENST00000433626.6 |
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| CDS-3UTR CAA 90 bp | CCTCCAGCTTATAGGGCTTCTGGAACAGAGTGGGTCTTGCTCTTCGTGATTCCACTTGTTCTGACATCTTaGGAAAAACTGTCCACAGTG | + |
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Preference number: 5 (lower is better) Translates to: PPAYRASGTEWVLLFVIPLVLTS*EKLSTV Trigger: CACTGTGGACAGTTTTTCCAAAGATGTCAGAACAAG...TGGAATCACGAAGAGCAAGACCCACTCTGTTCCAGAAGCCCTATAAGCTGGAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000244295.13 ENST00000405312.8 ENST00000433626.6 |
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| CDS-3UTR CAA 90 bp | AGTGGCTCACATGTCAGGTACAAGGGTTTTCCCATGAAATTTACATCGAGTTGTGGAACAGAGTGGGTCTaGCTCTTCGTGATTCCATGG | + |
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Preference number: 5 (lower is better) Translates to: SGSHVRYKGFPMKFTSSCGTEWV*LFVIPW Trigger: CCATGGAATCACGAAGAGCAAGACCCACTCTGTTCC...ACAACTCGATGTAAATTTCATGGGAAAACCCTTGTACCTGACATGTGAGCCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000244295.13 ENST00000405312.8 ENST00000433626.6 |
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| CDS-3UTR CAA 90 bp | TTTACATCGAGTTGTCCACCTCCAGCTTATAGGGCTTCTGGAACAGAGTGGGTCATATCTGACACTCTGTaGTTACCCTCAGAAGCTACT | + |
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Preference number: 5 (lower is better) Translates to: FTSSCPPPAYRASGTEWVISDTL*LPSEAT Trigger: AGTAGCTTCTGAGGGTAACAACAGAGTGTCAGATAT...GACCCACTCTGTTCCAGAAGCCCTATAAGCTGGAGGTGGACAACTCGATGTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000244295.13 ENST00000405312.8 ENST00000433626.6 |
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| CDS-3UTR CAA 90 bp | GGCTTCTGGAACAGAGTGGGTCTTGCTCTTCGTGATTCCATGGGAGAAAATGGATGGGAGAAAATGGAATaGGAGGAACTAGTAGAATTC | + |
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Preference number: 5 (lower is better) Translates to: GFWNRVGLALRDSMGENGWEKME*EELVEF Trigger: GAATTCTACTAGTTCCTCCAATTCCATTTTCTCCCA...TCCATTTTCTCCCATGGAATCACGAAGAGCAAGACCCACTCTGTTCCAGAAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000244295.13 ENST00000405312.8 ENST00000433626.6 |
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| CDS-3UTR CAA 90 bp | GCTGTTGTTATGGTGTCGAACATTTTGGTGAGTTCTGAGTGGCTCACATGTCAGCTTGTTCTGACATCTTaGGAAAAACTGTCCACAGTG | + |
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Preference number: 5 (lower is better) Translates to: AVVMVSNILVSSEWLTCQLVLTS*EKLSTV Trigger: CACTGTGGACAGTTTTTCCAAAGATGTCAGAACAAG...CTGACATGTGAGCCACTCAGAACTCACCAAAATGTTCGACACCATAACAACAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000244295.13 ENST00000405312.8 ENST00000433626.6 |
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| CDS-3UTR CAA 90 bp | GCTGTTGTTATGGTGTCGAACATTTTGGTGAGTTCTGAGTGGCTCACATGTCAGTGGGAGAAAATGGAATaGGAGGAACTAGTAGAATTC | + |
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Preference number: 5 (lower is better) Translates to: AVVMVSNILVSSEWLTCQWEKME*EELVEF Trigger: GAATTCTACTAGTTCCTCCAATTCCATTTTCTCCCA...CTGACATGTGAGCCACTCAGAACTCACCAAAATGTTCGACACCATAACAACAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000244295.13 ENST00000405312.8 ENST00000433626.6 |
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| CDS-3UTR CAA 90 bp | ATGAAATTTACATCGAGTTGTCCACCTCCAGCTTATAGGGCTTCTGGAACAGAGATATCTGACACTCTGTaGTTACCCTCAGAAGCTACT | + |
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Preference number: 5 (lower is better) Translates to: MKFTSSCPPPAYRASGTEISDTL*LPSEAT Trigger: AGTAGCTTCTGAGGGTAACAACAGAGTGTCAGATAT...CTCTGTTCCAGAAGCCCTATAAGCTGGAGGTGGACAACTCGATGTAAATTTCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000244295.13 ENST00000405312.8 ENST00000433626.6 |
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| CDS-3UTR CAA 90 bp | GATGGGGAGTCTTGTTCTGACATCTTTGGAAAAACTGTCCACAGTGTGAAGTCATGGGAGAAAATGGAATaGGAGGAACTAGTAGAATTC | + |
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Preference number: 5 (lower is better) Translates to: DGESCSDIFGKTVHSVKSWEKME*EELVEF Trigger: GAATTCTACTAGTTCCTCCAATTCCATTTTCTCCCA...TGACTTCACACTGTGGACAGTTTTTCCAAAGATGTCAGAACAAGACTCCCCATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000244295.13 ENST00000405312.8 ENST00000433626.6 |
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| CDS TCA 90 bp | TTAAACTTTTACAAAACCCTTGAGAATAGGAAGCCAAACCAAGGCTaGCTTCAGACTTTGCCTGCAGTTCATATTGGTTCATTCTATCTA | + |
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Preference number: 5 (lower is better) Translates to: LNFYKTLENRKPNQG*LQTLPAVHIGSFYL Trigger: TAGATAGAATGAACCAATATGAACTGCAGGCAAAGTCTGAAGTCAGCCTTGGTTTGGCTTCCTATTCTCAAGGGTTTTGTAAAAGTTTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000597374.5 |
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| CDS TCA 72 bp | TACAAAACCCTTGAGAATAGGAAGCCAAACCAAGGCTaGCTTCAGACTTTGCCTGCAGTTCATATTGGTTCA | + |
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Preference number: 6 (lower is better) Translates to: YKTLENRKPNQG*LQTLPAVHIGS Trigger: TGAACCAATATGAACTGCAGGCAAAGTCTGAAGTCAGCCTTGGTTTGGCTTCCTATTCTCAAGGGTTTTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000597374.5 |
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| CDS GCA 72 bp | AGAATAGGAAGCCAAACCAAGGCTGACTTCAGACTTTaGCTGCAGTTCATATTGGTTCATTCTATCTATATT | + |
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Preference number: 6 (lower is better) Translates to: RIGSQTKADFRL*LQFILVHSIYI Trigger: AATATAGATAGAATGAACCAATATGAACTGCAGGCAAAGTCTGAAGTCAGCCTTGGTTTGGCTTCCTATTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000597374.5 |
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