Pregenerated sensors for PSCA (Homo sapiens)
Ensembl gene IDs: ENSG00000167653Ensembl transcript IDs: ENST00000301258.5, ENST00000505305.1, ENST00000510969.1, ENST00000513264.1
Found 95 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TTGGAGGGGCCATCTGCAGGCGGATCTGTGTCAATAGAGCCGATCTaGCGGGTGGGAGTCCTGGAGAGGGCCATGGGAGGGTCAGGGTGG | + |
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Preference number: 1 (lower is better) Translates to: LEGPSAGGSVSIEPI*RVGVLERAMGGSGW Trigger: CCACCCTGACCCTCCCATGGCCCTCTCCAGGACTCCCACCCGGCAGATCGGCTCTATTGACACAGATCCGCCTGCAGATGGCCCCTCCAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301258.5 |
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| 3UTR CCA 90 bp | ATCTGCCGGGTGGGAGTCCTGGAGAGGGCCATGGGAGGGTCAGGGTaGGGGACAGGGGCGCAGACATACATGGTCAGACTTGCGTTAGGA | + |
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Preference number: 1 (lower is better) Translates to: ICRVGVLERAMGGSG*GTGAQTYMVRLALG Trigger: TCCTAACGCAAGTCTGACCATGTATGTCTGCGCCCCTGTCCCCCACCCTGACCCTCCCATGGCCCTCTCCAGGACTCCCACCCGGCAGAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000301258.5 |
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| 3UTR GCA 90 bp | GGGGACAGGGGCGCAGACATACATGGTCAGACTTGCGTTAGGATGTaGCTCAGGAACCAGGACAGGCTCCCACTGGGCCGGGTGTGTGAG | + |
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Preference number: 1 (lower is better) Translates to: GDRGADIHGQTCVRM*LRNQDRLPLGRVCE Trigger: CTCACACACCCGGCCCAGTGGGAGCCTGTCCTGGTTCCTGAGGCACATCCTAACGCAAGTCTGACCATGTATGTCTGCGCCCCTGTCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000301258.5 |
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| 3UTR GCA 90 bp | AGGGTCAGGGTGGGGGACAGGGGCGCAGACATACATGGTCAGACTTaGGTTAGGATGTGCCTCAGGAACCAGGACAGGCTCCCACTGGGC | + |
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Preference number: 1 (lower is better) Translates to: RVRVGDRGADIHGQT*VRMCLRNQDRLPLG Trigger: GCCCAGTGGGAGCCTGTCCTGGTTCCTGAGGCACATCCTAACGCAAGTCTGACCATGTATGTCTGCGCCCCTGTCCCCCACCCTGACCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000301258.5 |
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| 3UTR GCA 90 bp | TGCTGGGCCATGGAAACAGCAGCAGAGAGGGTTGGAGGGGCCATCTaGAGGCGGATCTGTGTCAATAGAGCCGATCTGCCGGGTGGGAGT | + |
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Preference number: 1 (lower is better) Translates to: CWAMETAAERVGGAI*RRICVNRADLPGGS Trigger: ACTCCCACCCGGCAGATCGGCTCTATTGACACAGATCCGCCTGCAGATGGCCCCTCCAACCCTCTCTGCTGCTGTTTCCATGGCCCAGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301258.5 |
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| 3UTR GCA 90 bp | TTCCTGGGGGAAGAGGTGCCTGAGCACAGGGTTAAGGGTGGAGAATaGTGGGCCATGGAAACAGCAGCAGAGAGGGTTGGAGGGGCCATC | + |
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Preference number: 1 (lower is better) Translates to: FLGEEVPEHRVKGGE*WAMETAAERVGGAI Trigger: GATGGCCCCTCCAACCCTCTCTGCTGCTGTTTCCATGGCCCAGCATTCTCCACCCTTAACCCTGTGCTCAGGCACCTCTTCCCCCAGGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000301258.5 |
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| 3UTR-3UTR TCA 90 bp | CTGTCCCCTGCTGGGTGCGGGGGACACCACGGACCAGACCTGGCTCAAGTCATAACTGGGCCGGGTGTGTaGGGAGTGGCACAGAGGCCT | + |
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Preference number: 2 (lower is better) Translates to: LSPAGCGGHHGPDLAQVITGPGV*GVAQRP Trigger: AGGCCTCTGTGCCACTCCTCACACACCCGGCCCAGT...TATGACTTGAGCCAGGTCTGGTCCGTGGTGTCCCCCGCACCCAGCAGGGGACAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000301258.5 |
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| 3UTR-3UTR GCA 90 bp | CCTATCCAGATGTCCGAGGCAGATGGACCACCCGCTGAGCGTCAGAAATGGGGTGGCTGGAGGGACAGATaGTGGGTGATTGTTGGGGGT | + |
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Preference number: 2 (lower is better) Translates to: PIQMSEADGPPAERQKWGGWRDR*WVIVGG Trigger: ACCCCCAACAATCACCCAGCATCTGTCCCTCCAGCC...ACCCCATTTCTGACGCTCAGCGGGTGGTCCATCTGCCTCGGACATCTGGATAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000513264.1 |
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| 3UTR-3UTR CCA 90 bp | CCCAGGAACTCACGTCGACTCCTGTCCTCCAGTTCTACTCAGTCCACTTCATCTAGCCGATCTGCCGGGTaGGAGTCCTGGAGAGGGCCA | + |
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Preference number: 2 (lower is better) Translates to: PRNSRRLLSSSSTQSTSSSRSAG*ESWRGP Trigger: TGGCCCTCTCCAGGACTCCCACCCGGCAGATCGGCT...AGATGAAGTGGACTGAGTAGAACTGGAGGACAGGAGTCGACGTGAGTTCCTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301258.5 |
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| 3UTR-3UTR GCA 90 bp | GAACTCACGTCGACTCCTGTCCTCCAGTTCTACTCAGTCCACTTCATCTCAGCCTCAATAGAGCCGATCTaGCGGGTGGGAGTCCTGGAG | + |
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Preference number: 2 (lower is better) Translates to: ELTSTPVLQFYSVHFISASIEPI*RVGVLE Trigger: CTCCAGGACTCCCACCCGGCAGATCGGCTCTATTGA...GGCTGAGATGAAGTGGACTGAGTAGAACTGGAGGACAGGAGTCGACGTGAGTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301258.5 |
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| 3UTR-3UTR GCA 90 bp | TCCAGTTCTACTCAGTCCACTTCATCTCAGCCTTTACCGGGCCCTCCTGAGTGCGTTGGAGGGGCCATCTaGAGGCGGATCTGTGTCAAT | + |
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Preference number: 2 (lower is better) Translates to: SSSTQSTSSQPLPGPPECVGGAI*RRICVN Trigger: ATTGACACAGATCCGCCTGCAGATGGCCCCTCCAAC...GCACTCAGGAGGGCCCGGTAAAGGCTGAGATGAAGTGGACTGAGTAGAACTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301258.5 |
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| 3UTR-3UTR CCA 90 bp | CCCAGGAACTCACGTCGACTCCTGTCCTCCAGTTCTACTCAGTCCACTTCATCTGAGAATGCTGGGCCATaGAAACAGCAGCAGAGAGGG | + |
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Preference number: 2 (lower is better) Translates to: PRNSRRLLSSSSTQSTSSENAGP*KQQQRG Trigger: CCCTCTCTGCTGCTGTTTCCATGGCCCAGCATTCTC...AGATGAAGTGGACTGAGTAGAACTGGAGGACAGGAGTCGACGTGAGTTCCTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301258.5 |
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| 3UTR-3UTR CCA 90 bp | CTATCCAGATGTCCGAGGCAGATGGACCACCCGCTGAGCGTCAGAAATGGGGTGACAGATGCGGACAGATaGCCAGAAAGATTAATAGTT | + |
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Preference number: 2 (lower is better) Translates to: LSRCPRQMDHPLSVRNGVTDADR*PERLIV Trigger: AACTATTAATCTTTCTGGCCATCTGTCCGCATCTGT...CACCCCATTTCTGACGCTCAGCGGGTGGTCCATCTGCCTCGGACATCTGGATAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000513264.1 |
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| 3UTR TCA 72 bp | TCAGTCCACTTCATCTCAGCCTTTACCGGGCCCTCCTaGGTGCCTGTCCCCTGCTGGGTGCGGGGGACACCA | + |
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Preference number: 3 (lower is better) Translates to: SVHFISAFTGPS*VPVPCWVRGTP Trigger: TGGTGTCCCCCGCACCCAGCAGGGGACAGGCACTCAGGAGGGCCCGGTAAAGGCTGAGATGAAGTGGACTGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000301258.5 |
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| 3UTR CCA 72 bp | TTAGGATGTGCCTCAGGAACCAGGACAGGCTCCCACTaGGCCGGGTGTGTGAGGAGTGGCACAGAGGCCTGG | + |
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Preference number: 3 (lower is better) Translates to: LGCASGTRTGSH*AGCVRSGTEAW Trigger: CCAGGCCTCTGTGCCACTCCTCACACACCCGGCCCAGTGGGAGCCTGTCCTGGTTCCTGAGGCACATCCTAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301258.5 |
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| 3UTR GCA 72 bp | GGCGCAGACATACATGGTCAGACTTGCGTTAGGATGTaGCTCAGGAACCAGGACAGGCTCCCACTGGGCCGG | + |
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Preference number: 3 (lower is better) Translates to: GADIHGQTCVRM*LRNQDRLPLGR Trigger: CCGGCCCAGTGGGAGCCTGTCCTGGTTCCTGAGGCACATCCTAACGCAAGTCTGACCATGTATGTCTGCGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301258.5 |
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| 3UTR GCA 72 bp | GTGGGGGACAGGGGCGCAGACATACATGGTCAGACTTaGGTTAGGATGTGCCTCAGGAACCAGGACAGGCTC | + |
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Preference number: 3 (lower is better) Translates to: VGDRGADIHGQT*VRMCLRNQDRL Trigger: GAGCCTGTCCTGGTTCCTGAGGCACATCCTAACGCAAGTCTGACCATGTATGTCTGCGCCCCTGTCCCCCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000301258.5 |
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| 3UTR GCA 72 bp | GAAGAGGTGCCTGAGCACAGGGTTAAGGGTGGAGAATaGTGGGCCATGGAAACAGCAGCAGAGAGGGTTGGA | + |
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Preference number: 3 (lower is better) Translates to: EEVPEHRVKGGE*WAMETAAERVG Trigger: TCCAACCCTCTCTGCTGCTGTTTCCATGGCCCAGCATTCTCCACCCTTAACCCTGTGCTCAGGCACCTCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301258.5 |
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| CDS-3UTR GCA 90 bp | CTGTCCCCTGCTGGGTGCGGGGGACACCACGGACCAGACCTGGCTCAAGTCATACGCGCGGTCCAGCACTaGTCCCCCAGCTGGGTGCAG | + |
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Preference number: 4 (lower is better) Translates to: LSPAGCGGHHGPDLAQVIRAVQH*SPSWVQ Trigger: CTGCACCCAGCTGGGGGAGCAGTGCTGGACCGCGCG...TATGACTTGAGCCAGGTCTGGTCCGTGGTGTCCCCCGCACCCAGCAGGGGACAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000301258.5 |
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| CDS-3UTR CCA 90 bp | GTTGGAGGGGCCATCTGCAGGCGGATCTGTGTCAATAGAGCCGATCTGCCGGGTGCCGGCTGCAGGGCATaGGCCCCGCTGGCGTTGCAC | + |
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Preference number: 4 (lower is better) Translates to: VGGAICRRICVNRADLPGAGCRA*APLALH Trigger: GTGCAACGCCAGCGGGGCCCATGCCCTGCAGCCGGC...ACCCGGCAGATCGGCTCTATTGACACAGATCCGCCTGCAGATGGCCCCTCCAAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000301258.5 |
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| CDS-3UTR CCA 90 bp | GCCTGTCCCCTGCTGGGTGCGGGGGACACCACGGACCAGACCTGGCTCAAGTCAAGCAGCAGAGAGGGTTaGAGGGGCCATCTGCAGGCG | + |
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Preference number: 4 (lower is better) Translates to: ACPLLGAGDTTDQTWLKSSSREG*RGHLQA Trigger: CGCCTGCAGATGGCCCCTCCAACCCTCTCTGCTGCT...TGACTTGAGCCAGGTCTGGTCCGTGGTGTCCCCCGCACCCAGCAGGGGACAGGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000301258.5 |
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| CDS-3UTR CCA 90 bp | CTTCATCTCAGCCTTTACCGGGCCCTCCTGAGTGCCTGTCCCCTGCTGGGTGCGAGGACAGGCTCCCACTaGGCCGGGTGTGTGAGGAGT | + |
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Preference number: 4 (lower is better) Translates to: LHLSLYRALLSACPLLGARTGSH*AGCVRS Trigger: ACTCCTCACACACCCGGCCCAGTGGGAGCCTGTCCT...CGCACCCAGCAGGGGACAGGCACTCAGGAGGGCCCGGTAAAGGCTGAGATGAAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301258.5 |
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| CDS-3UTR CCA 90 bp | CGGATCTGTGTCAATAGAGCCGATCTGCCGGGTGGGAGTCCTGGAGAGGGCCATGCCGGGTGGGAGTCCTaGAGAGGGCCATGGGAGGGT | + |
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Preference number: 4 (lower is better) Translates to: RICVNRADLPGGSPGEGHAGWES*RGPWEG Trigger: ACCCTCCCATGGCCCTCTCCAGGACTCCCACCCGGC...ATGGCCCTCTCCAGGACTCCCACCCGGCAGATCGGCTCTATTGACACAGATCCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301258.5 |
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| CDS-3UTR TCA 90 bp | GTCAGGGTGGGGGACAGGGGCGCAGACATACATGGTCAGACTTGCGTTAGGATGTTTACCGGGCCCTCCTaGGTGCCTGTCCCCTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: VRVGDRGADIHGQTCVRMFTGPS*VPVPCW Trigger: CCAGCAGGGGACAGGCACTCAGGAGGGCCCGGTAAA...CATCCTAACGCAAGTCTGACCATGTATGTCTGCGCCCCTGTCCCCCACCCTGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000301258.5 |
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| CDS-3UTR GCA 90 bp | GTCAGGGTGGGGGACAGGGGCGCAGACATACATGGTCAGACTTGCGTTAGGATGAGCACAGCAGGGCAGTaGCTGGCTGCAGGGCCAAGC | + |
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Preference number: 4 (lower is better) Translates to: VRVGDRGADIHGQTCVRMSTAGQ*LAAGPS Trigger: GCTTGGCCCTGCAGCCAGGCACTGCCCTGCTGTGCT...CATCCTAACGCAAGTCTGACCATGTATGTCTGCGCCCCTGTCCCCCACCCTGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000301258.5 |
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| CDS-3UTR GCA 90 bp | CTTCATCTCAGCCTTTACCGGGCCCTCCTGAGTGCCTGTCCCCTGCTGGGTGCGTCAATAGAGCCGATCTaGCGGGTGGGAGTCCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: LHLSLYRALLSACPLLGASIEPI*RVGVLE Trigger: CTCCAGGACTCCCACCCGGCAGATCGGCTCTATTGA...CGCACCCAGCAGGGGACAGGCACTCAGGAGGGCCCGGTAAAGGCTGAGATGAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301258.5 |
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| CDS-3UTR GCA 90 bp | ACTCCTGTCCTCCAGTTCTACTCAGTCCACTTCATCTCAGCCTTTACCGGGCCCCCGGGCCCTCCTGAGTaGCTGTCCCCTGCTGGGTGC | + |
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Preference number: 4 (lower is better) Translates to: TPVLQFYSVHFISAFTGPPGPPE*LSPAGC Trigger: GCACCCAGCAGGGGACAGGCACTCAGGAGGGCCCGG...GGGCCCGGTAAAGGCTGAGATGAAGTGGACTGAGTAGAACTGGAGGACAGGAGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000301258.5 |
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| CDS-3UTR TCA 90 bp | CTGGAGACTCCCAGGAACTCACGTCGACTCCTGTCCTCCAGTTCTACTCAGTCCACTGGGCCGGGTGTGTaGGGAGTGGCACAGAGGCCT | + |
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Preference number: 4 (lower is better) Translates to: LETPRNSRRLLSSSSTQSTGPGV*GVAQRP Trigger: AGGCCTCTGTGCCACTCCTCACACACCCGGCCCAGT...GGACTGAGTAGAACTGGAGGACAGGAGTCGACGTGAGTTCCTGGGAGTCTCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301258.5 |
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| CDS-3UTR TCA 90 bp | AGGGGCGCAGACATACATGGTCAGACTTGCGTTAGGATGTGCCTCAGGAACCAGGGAGCCCCACGAATGTaGGGCCTGGCCCCTTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: RGADIHGQTCVRMCLRNQGAPRM*GLAPSS Trigger: GGAGGAAGGGGCCAGGCCTCACATTCGTGGGGCTCC...CTGGTTCCTGAGGCACATCCTAACGCAAGTCTGACCATGTATGTCTGCGCCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000301258.5 |
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| CDS-3UTR TCA 90 bp | TCAGGGTGGGGGACAGGGGCGCAGACATACATGGTCAGACTTGCGTTAGGATGTGGGCCTACGCTGTGCTaGGGCTGCCATTCAGGGAGC | + |
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Preference number: 4 (lower is better) Translates to: SGWGTGAQTYMVRLALGCGPTLC*GCHSGS Trigger: GCTCCCTGAATGGCAGCCTCAGCACAGCGTAGGCCC...ACATCCTAACGCAAGTCTGACCATGTATGTCTGCGCCCCTGTCCCCCACCCTGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000301258.5 |
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| CDS-3UTR GCA 90 bp | GTTCTACTCAGTCCACTTCATCTCAGCCTTTACCGGGCCCTCCTGAGTGCCTGTGGCCAACTGCGCGGATaGGCGCGGTCCAGCACTGCT | + |
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Preference number: 4 (lower is better) Translates to: VLLSPLHLSLYRALLSACGQLRG*ARSSTA Trigger: AGCAGTGCTGGACCGCGCGCATCCGCGCAGTTGGCC...ACAGGCACTCAGGAGGGCCCGGTAAAGGCTGAGATGAAGTGGACTGAGTAGAAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301258.5 |
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| CDS-3UTR GCA 90 bp | CTGGAGACTCCCAGGAACTCACGTCGACTCCTGTCCTCCAGTTCTACTCAGTCCGGGCCCCGCTGGCGTTaGACAAGTCGGTGTCACAGC | + |
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Preference number: 4 (lower is better) Translates to: LETPRNSRRLLSSSSTQSGPRWR*TSRCHS Trigger: GCTGTGACACCGACTTGTGCAACGCCAGCGGGGCCC...GGACTGAGTAGAACTGGAGGACAGGAGTCGACGTGAGTTCCTGGGAGTCTCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301258.5 |
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| CDS-3UTR CCA 90 bp | GTTCTACTCAGTCCACTTCATCTCAGCCTTTACCGGGCCCTCCTGAGTGCCTGTCAGCAGGGCAGTGCCTaGCTGCAGGGCCAAGCCTGC | + |
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Preference number: 4 (lower is better) Translates to: VLLSPLHLSLYRALLSACQQGSA*LQGQAC Trigger: GCAGGCTTGGCCCTGCAGCCAGGCACTGCCCTGCTG...ACAGGCACTCAGGAGGGCCCGGTAAAGGCTGAGATGAAGTGGACTGAGTAGAAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301258.5 |
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| CDS-3UTR CCA 90 bp | TCTACTCAGTCCACTTCATCTCAGCCTTTACCGGGCCCTCCTGAGTGCCTGTCCAGCCGATCTGCCGGGTaGGAGTCCTGGAGAGGGCCA | + |
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Preference number: 4 (lower is better) Translates to: STQSTSSQPLPGPPECLSSRSAG*ESWRGP Trigger: TGGCCCTCTCCAGGACTCCCACCCGGCAGATCGGCT...GGACAGGCACTCAGGAGGGCCCGGTAAAGGCTGAGATGAAGTGGACTGAGTAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301258.5 |
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| CDS-3UTR CCA 90 bp | CCCAGGAACTCACGTCGACTCCTGTCCTCCAGTTCTACTCAGTCCACTTCATCTGTGCCTGTCCCCTGCTaGGTGCGGGGGACACCACGG | + |
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Preference number: 4 (lower is better) Translates to: PRNSRRLLSSSSTQSTSSVPVPC*VRGTPR Trigger: CCGTGGTGTCCCCCGCACCCAGCAGGGGACAGGCAC...AGATGAAGTGGACTGAGTAGAACTGGAGGACAGGAGTCGACGTGAGTTCCTGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000301258.5 |
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| CDS-3UTR CCA 90 bp | CTATCCAGATGTCCGAGGCAGATGGACCACCCGCTGAGCGTCAGAAATGGGGTGAGCCTTCGTGGTCACTaGTGGGCTGTGGTGGAGAGG | + |
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Preference number: 4 (lower is better) Translates to: LSRCPRQMDHPLSVRNGVSLRGH*WAVVER Trigger: CCTCTCCACCACAGCCCACCAGTGACCACGAAGGCT...CACCCCATTTCTGACGCTCAGCGGGTGGTCCATCTGCCTCGGACATCTGGATAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000513264.1 |
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| CDS-3UTR GCA 90 bp | CCCAGGAACTCACGTCGACTCCTGTCCTCCAGTTCTACTCAGTCCACTTCATCTAGGGCAGTGCCTGGCTaGAGGGCCAAGCCTGCCATC | + |
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Preference number: 4 (lower is better) Translates to: PRNSRRLLSSSSTQSTSSRAVPG*RAKPAI Trigger: GATGGCAGGCTTGGCCCTGCAGCCAGGCACTGCCCT...AGATGAAGTGGACTGAGTAGAACTGGAGGACAGGAGTCGACGTGAGTTCCTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301258.5 |
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| CDS-3UTR GCA 90 bp | CCCAGGAACTCACGTCGACTCCTGTCCTCCAGTTCTACTCAGTCCACTTCATCTGCTCCCCCAGCTGGGTaGAGTTCTCCACCTGCAGGC | + |
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Preference number: 4 (lower is better) Translates to: PRNSRRLLSSSSTQSTSSAPPAG*SSPPAG Trigger: GCCTGCAGGTGGAGAACTGCACCCAGCTGGGGGAGC...AGATGAAGTGGACTGAGTAGAACTGGAGGACAGGAGTCGACGTGAGTTCCTGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000301258.5 |
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| CDS-3UTR GCA 90 bp | GTTCTACTCAGTCCACTTCATCTCAGCCTTTACCGGGCCCTCCTGAGTGCCTGTGAGCAGCAGGCCGAGTaGAGGGAGCAGCGCAAGGAT | + |
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Preference number: 4 (lower is better) Translates to: VLLSPLHLSLYRALLSACEQQAE*REQRKD Trigger: ATCCTTGCGCTGCTCCCTGCACTCGGCCTGCTGCTC...ACAGGCACTCAGGAGGGCCCGGTAAAGGCTGAGATGAAGTGGACTGAGTAGAAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301258.5 |
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| CDS-3UTR CCA 90 bp | ACTCCTGTCCTCCAGTTCTACTCAGTCCACTTCATCTCAGCCTTTACCGGGCCCCACTGCTCCCCCAGCTaGGTGCAGTTCTCCACCTGC | + |
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Preference number: 4 (lower is better) Translates to: TPVLQFYSVHFISAFTGPHCSPS*VQFSTC Trigger: GCAGGTGGAGAACTGCACCCAGCTGGGGGAGCAGTG...GGGCCCGGTAAAGGCTGAGATGAAGTGGACTGAGTAGAACTGGAGGACAGGAGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000301258.5 |
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| CDS-3UTR CCA 90 bp | CCCAGGAACTCACGTCGACTCCTGTCCTCCAGTTCTACTCAGTCCACTTCATCTGGGCATGGGCCCCGCTaGCGTTGCACAAGTCGGTGT | + |
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Preference number: 4 (lower is better) Translates to: PRNSRRLLSSSSTQSTSSGHGPR*RCTSRC Trigger: ACACCGACTTGTGCAACGCCAGCGGGGCCCATGCCC...AGATGAAGTGGACTGAGTAGAACTGGAGGACAGGAGTCGACGTGAGTTCCTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301258.5 |
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| CDS-3UTR TCA 90 bp | CAGCAGCAGAGAGGGTTGGAGGGGCCATCTGCAGGCGGATCTGTGTCAATAGAGCGGTGTCACAGCACGTaGTGTTCTTCTTGCCCACGT | + |
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Preference number: 4 (lower is better) Translates to: QQQRGLEGPSAGGSVSIERCHST*CSSCPR Trigger: ACGTGGGCAAGAAGAACATCACGTGCTGTGACACCG...CTCTATTGACACAGATCCGCCTGCAGATGGCCCCTCCAACCCTCTCTGCTGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301258.5 |
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| CDS-3UTR GCA 90 bp | CTTCATCTCAGCCTTTACCGGGCCCTCCTGAGTGCCTGTCCCCTGCTGGGTGCGATACATGGTCAGACTTaGGTTAGGATGTGCCTCAGG | + |
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Preference number: 4 (lower is better) Translates to: LHLSLYRALLSACPLLGAIHGQT*VRMCLR Trigger: CCTGAGGCACATCCTAACGCAAGTCTGACCATGTAT...CGCACCCAGCAGGGGACAGGCACTCAGGAGGGCCCGGTAAAGGCTGAGATGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301258.5 |
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| CDS-3UTR TCA 90 bp | CAGTCCACTTCATCTCAGCCTTTACCGGGCCCTCCTGAGTGCCTGTCCCCTGCTCACGTAGTAGTCCTGTaGGTCATCCACGCAGTTCAA | + |
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Preference number: 4 (lower is better) Translates to: QSTSSQPLPGPPECLSPAHVVVL*VIHAVQ Trigger: TTGAACTGCGTGGATGACTCACAGGACTACTACGTG...AGCAGGGGACAGGCACTCAGGAGGGCCCGGTAAAGGCTGAGATGAAGTGGACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301258.5 |
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| CDS-3UTR GCA 90 bp | ACTCCTGTCCTCCAGTTCTACTCAGTCCACTTCATCTCAGCCTTTACCGGGCCCTGCTCACCTGGGCTTTaGAGGAGTAGCACAGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: TPVLQFYSVHFISAFTGPCSPGL*RSSTAG Trigger: CCCTGCTGTGCTACTCCTGCAAAGCCCAGGTGAGCA...GGGCCCGGTAAAGGCTGAGATGAAGTGGACTGAGTAGAACTGGAGGACAGGAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301258.5 |
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| CDS-3UTR CCA 90 bp | CAGCACACAGATGCGGACAGATGGCCAGAAAGATTAATAGTTCAGTGGCAGAGACAGCAGGGCAGTGCCTaGCTGCAGGGCCAAGCCTGC | + |
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Preference number: 4 (lower is better) Translates to: QHTDADRWPERLIVQWQRQQGSA*LQGQAC Trigger: GCAGGCTTGGCCCTGCAGCCAGGCACTGCCCTGCTG...TCTCTGCCACTGAACTATTAATCTTTCTGGCCATCTGTCCGCATCTGTGTGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000513264.1 |
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| CDS-3UTR CCA 90 bp | GGGACAGGTGGAAGGAAAACAGCACACAGATGCGGACAGATGGCCAGAAAGATTCACTGCTCCCCCAGCTaGGTGCAGTTCTCCACCTGC | + |
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Preference number: 4 (lower is better) Translates to: GTGGRKTAHRCGQMARKIHCSPS*VQFSTC Trigger: GCAGGTGGAGAACTGCACCCAGCTGGGGGAGCAGTG...AATCTTTCTGGCCATCTGTCCGCATCTGTGTGCTGTTTTCCTTCCACCTGTCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000513264.1 |
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| CDS-3UTR GCA 90 bp | AGGAAAACAGCACACAGATGCGGACAGATGGCCAGAAAGATTAATAGTTCAGTGCGCGCGGTCCAGCACTaGTCCCCCAGCTGGGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RKTAHRCGQMARKINSSVRAVQH*SPSWVQ Trigger: CTGCACCCAGCTGGGGGAGCAGTGCTGGACCGCGCG...CACTGAACTATTAATCTTTCTGGCCATCTGTCCGCATCTGTGTGCTGTTTTCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000513264.1 |
||
| CDS-3UTR GCA 90 bp | TTATTAAGGGCCTACGCTGTGCTGAGGCTGCCATTCAGGGAGCCCCACGAATGTGTTGGAGGGGCCATCTaGAGGCGGATCTGTGTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: LLRAYAVLRLPFREPHECVGGAI*RRICVN Trigger: ATTGACACAGATCCGCCTGCAGATGGCCCCTCCAAC...ACATTCGTGGGGCTCCCTGAATGGCAGCCTCAGCACAGCGTAGGCCCTTAATAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000301258.5 |
||
| CDS-3UTR CCA 90 bp | TTATTAAGGGCCTACGCTGTGCTGAGGCTGCCATTCAGGGAGCCCCACGAATGTGAGAATGCTGGGCCATaGAAACAGCAGCAGAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LLRAYAVLRLPFREPHECENAGP*KQQQRG Trigger: CCCTCTCTGCTGCTGTTTCCATGGCCCAGCATTCTC...ACATTCGTGGGGCTCCCTGAATGGCAGCCTCAGCACAGCGTAGGCCCTTAATAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301258.5 |
||
| CDS-3UTR GCA 90 bp | AGGAAAACAGCACACAGATGCGGACAGATGGCCAGAAAGATTAATAGTTCAGTGAGGGCAGTGCCTGGCTaGAGGGCCAAGCCTGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: RKTAHRCGQMARKINSSVRAVPG*RAKPAI Trigger: GATGGCAGGCTTGGCCCTGCAGCCAGGCACTGCCCT...CACTGAACTATTAATCTTTCTGGCCATCTGTCCGCATCTGTGTGCTGTTTTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000513264.1 |
||
| CDS-3UTR GCA 90 bp | AGGAAAACAGCACACAGATGCGGACAGATGGCCAGAAAGATTAATAGTTCAGTGAGCACAGCAGGGCAGTaGCTGGCTGCAGGGCCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: RKTAHRCGQMARKINSSVSTAGQ*LAAGPS Trigger: GCTTGGCCCTGCAGCCAGGCACTGCCCTGCTGTGCT...CACTGAACTATTAATCTTTCTGGCCATCTGTCCGCATCTGTGTGCTGTTTTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000513264.1 |
||
| CDS-3UTR GCA 90 bp | GTGGAAGGAAAACAGCACACAGATGCGGACAGATGGCCAGAAAGATTAATAGTTGCTCCCCCAGCTGGGTaGAGTTCTCCACCTGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: VEGKQHTDADRWPERLIVAPPAG*SSPPAG Trigger: GCCTGCAGGTGGAGAACTGCACCCAGCTGGGGGAGC...AACTATTAATCTTTCTGGCCATCTGTCCGCATCTGTGTGCTGTTTTCCTTCCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000513264.1 |
||
| CDS-3UTR CCA 90 bp | CAGCACACAGATGCGGACAGATGGCCAGAAAGATTAATAGTTCAGTGGCAGAGAATGCTGGGTGATTGTTaGGGGTGCAGGTGCGGGACG | + |
|
Preference number: 4 (lower is better) Translates to: QHTDADRWPERLIVQWQRMLGDC*GCRCGT Trigger: CGTCCCGCACCTGCACCCCCAACAATCACCCAGCAT...TCTCTGCCACTGAACTATTAATCTTTCTGGCCATCTGTCCGCATCTGTGTGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000513264.1 |
||
| CDS-3UTR GCA 90 bp | GCGCAGACATACATGGTCAGACTTGCGTTAGGATGTGCCTCAGGAACCAGGACAGTTAAGGGTGGAGAATaGTGGGCCATGGAAACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: AQTYMVRLALGCASGTRTVKGGE*WAMETA Trigger: TGCTGTTTCCATGGCCCAGCATTCTCCACCCTTAAC...TGTCCTGGTTCCTGAGGCACATCCTAACGCAAGTCTGACCATGTATGTCTGCGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301258.5 |
||
| CDS-3UTR CCA 90 bp | GTGGAAGGAAAACAGCACACAGATGCGGACAGATGGCCAGAAAGATTAATAGTTGTCACTGGTGGGCTGTaGTGGAGAGGGCCTCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: VEGKQHTDADRWPERLIVVTGGL*WRGPQV Trigger: CACCTGAGGCCCTCTCCACCACAGCCCACCAGTGAC...AACTATTAATCTTTCTGGCCATCTGTCCGCATCTGTGTGCTGTTTTCCTTCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000513264.1 |
||
| CDS-3UTR TCA 90 bp | GGGACAGGTGGAAGGAAAACAGCACACAGATGCGGACAGATGGCCAGAAAGATTCAGAAATGGGGTGAGTaGGTAAGTGAGCTCAGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: GTGGRKTAHRCGQMARKIQKWGE*VSELRD Trigger: ATCCCTGAGCTCACTTACTCACTCACCCCATTTCTG...AATCTTTCTGGCCATCTGTCCGCATCTGTGTGCTGTTTTCCTTCCACCTGTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000513264.1 |
||
| CDS-3UTR CCA 90 bp | AGGAAAACAGCACACAGATGCGGACAGATGGCCAGAAAGATTAATAGTTCAGTGGCAGCACAGCCTTCGTaGTCACTGGTGGGCTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: RKTAHRCGQMARKINSSVAAQPS*SLVGCG Trigger: ACCACAGCCCACCAGTGACCACGAAGGCTGTGCTGC...CACTGAACTATTAATCTTTCTGGCCATCTGTCCGCATCTGTGTGCTGTTTTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000513264.1 |
||
| CDS-3UTR CCA 90 bp | AGGAAAACAGCACACAGATGCGGACAGATGGCCAGAAAGATTAATAGTTCAGTGAGATTAATAGTTCAGTaGCAGAGACCTAGGCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: RKTAHRCGQMARKINSSVRLIVQ*QRPRPG Trigger: GCCAGGCCTAGGTCTCTGCCACTGAACTATTAATCT...CACTGAACTATTAATCTTTCTGGCCATCTGTCCGCATCTGTGTGCTGTTTTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000513264.1 |
||
| CDS-3UTR CCA 90 bp | AGGAAAACAGCACACAGATGCGGACAGATGGCCAGAAAGATTAATAGTTCAGTGACAGATGCGGACAGATaGCCAGAAAGATTAATAGTT | + |
|
Preference number: 4 (lower is better) Translates to: RKTAHRCGQMARKINSSVTDADR*PERLIV Trigger: AACTATTAATCTTTCTGGCCATCTGTCCGCATCTGT...CACTGAACTATTAATCTTTCTGGCCATCTGTCCGCATCTGTGTGCTGTTTTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000513264.1 |
||
| CDS CCA 90 bp | CGGGTCCCCAGAGCAGCAGGCCGAGTGCAGGGAGCAGCGCAAGGATaGCAGCAGCCGGCTGCAGGGCATGGGCCCCGCTGGCGTTGCACA | + |
|
Preference number: 5 (lower is better) Translates to: RVPRAAGRVQGAAQG*QQPAAGHGPRWRCT Trigger: TGTGCAACGCCAGCGGGGCCCATGCCCTGCAGCCGGCTGCTGCCATCCTTGCGCTGCTCCCTGCACTCGGCCTGCTGCTCTGGGGACCCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000301258.5 ENST00000510969.1 |
||
| CDS CCA 90 bp | AGGCCAACTGCGCGGATGCGCGCGGTCCAGCACTGCTCCCCCAGCTaGGTGCAGTTCTCCACCTGCAGGCAGTCCTCGTTGCTCACCTGG | + |
|
Preference number: 5 (lower is better) Translates to: RPTARMRAVQHCSPS*VQFSTCRQSSLLTW Trigger: CCAGGTGAGCAACGAGGACTGCCTGCAGGTGGAGAACTGCACCCAGCTGGGGGAGCAGTGCTGGACCGCGCGCATCCGCGCAGTTGGCCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000301258.5 ENST00000510969.1 |
||
| CDS-3UTR CAA 90 bp | GCCTGTCCCCTGCTGGGTGCGGGGGACACCACGGACCAGACCTGGCTCAAGTCATGGGCCCCGCTGGCGTaGCACAAGTCGGTGTCACAG | + |
|
Preference number: 5 (lower is better) Translates to: ACPLLGAGDTTDQTWLKSWAPLA*HKSVSQ Trigger: CTGTGACACCGACTTGTGCAACGCCAGCGGGGCCCA...TGACTTGAGCCAGGTCTGGTCCGTGGTGTCCCCCGCACCCAGCAGGGGACAGGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000301258.5 |
||
| CDS CCA 90 bp | AGCACTGCCCTCCCCGCATCAGAAACTGCACCGGGAAGACCGTCCTaGGCTGATCGGCACGAAACCCTGGGCGCCTGTGGCTGCCCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: STALPASETAPGRPS*ADRHETLGACGCPR Trigger: TCTGGGGCAGCCACAGGCGCCCAGGGTTTCGTGCCGATCAGCCCAGGACGGTCTTCCCGGTGCAGTTTCTGATGCGGGGAGGGCAGTGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000505305.1 ENST00000510969.1 |
||
| CDS CCA 90 bp | AAACTGCACCGGGAAGACCGTCCTGGGCTGATCGGCACGAAACCCTaGGCGCCTGTGGCTGCCCCAGAACTGCAGGAGCCCCAACGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: KLHREDRPGLIGTKP*APVAAPELQEPQRL Trigger: AAGGCGTTGGGGCTCCTGCAGTTCTGGGGCAGCCACAGGCGCCCAGGGTTTCGTGCCGATCAGCCCAGGACGGTCTTCCCGGTGCAGTTT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000505305.1 ENST00000510969.1 |
||
| CDS CCA 90 bp | GCTGGCCTCAGGATTGCAAGCAGTGCGAGGGCCTGGTCTCGGCCCTaGTCTCAGCCCTATCCAGATGTCCGAGGCAGATGGACCACCCGC | + |
|
Preference number: 5 (lower is better) Translates to: AGLRIASSARAWSRP*SQPYPDVRGRWTTR Trigger: GCGGGTGGTCCATCTGCCTCGGACATCTGGATAGGGCTGAGACCAGGGCCGAGACCAGGCCCTCGCACTGCTTGCAATCCTGAGGCCAGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505305.1 |
||
| CDS CCA 90 bp | GAGTCCCCCTGGGCTGGCCTCAGGATTGCAAGCAGTGCGAGGGCCTaGTCTCGGCCCTGGTCTCAGCCCTATCCAGATGTCCGAGGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: ESPWAGLRIASSARA*SRPWSQPYPDVRGR Trigger: TCTGCCTCGGACATCTGGATAGGGCTGAGACCAGGGCCGAGACCAGGCCCTCGCACTGCTTGCAATCCTGAGGCCAGCCCAGGGGGACTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000505305.1 |
||
| CDS CCA 90 bp | CAGGCCTCCTCCTGTCCCACCCTGCCTAATGCTCTAGAGTCCCCCTaGGCTGGCCTCAGGATTGCAAGCAGTGCGAGGGCCTGGTCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: QASSCPTLPNALESP*AGLRIASSARAWSR Trigger: CCGAGACCAGGCCCTCGCACTGCTTGCAATCCTGAGGCCAGCCCAGGGGGACTCTAGAGCATTAGGCAGGGTGGGACAGGAGGAGGCCTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000505305.1 |
||
| CDS-3UTR CAA 90 bp | GCCTGTCCCCTGCTGGGTGCGGGGGACACCACGGACCAGACCTGGCTCAAGTCATGCAGGCAGTCCTCGTaGCTCACCTGGGCTTTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: ACPLLGAGDTTDQTWLKSCRQSS*LTWALQ Trigger: CTGCAAAGCCCAGGTGAGCAACGAGGACTGCCTGCA...TGACTTGAGCCAGGTCTGGTCCGTGGTGTCCCCCGCACCCAGCAGGGGACAGGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000301258.5 |
||
| CDS TCA 90 bp | GGGCATGGGCCCCGCTGGCGTTGCACAAGTCGGTGTCACAGCACGTaGTGTTCTTCTTGCCCACGTAGTAGTCCTGTGAGTCATCCACGC | + |
|
Preference number: 5 (lower is better) Translates to: GHGPRWRCTSRCHST*CSSCPRSSPVSHPR Trigger: GCGTGGATGACTCACAGGACTACTACGTGGGCAAGAAGAACATCACGTGCTGTGACACCGACTTGTGCAACGCCAGCGGGGCCCATGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000301258.5 ENST00000510969.1 |
||
| CDS-3UTR CAA 90 bp | GTTCTACTCAGTCCACTTCATCTCAGCCTTTACCGGGCCCTCCTGAGTGCCTGTCAGCAGCAGAGAGGGTaGGAGGGGCCATCTGCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: VLLSPLHLSLYRALLSACQQQRG*EGPSAG Trigger: GCCTGCAGATGGCCCCTCCAACCCTCTCTGCTGCTG...ACAGGCACTCAGGAGGGCCCGGTAAAGGCTGAGATGAAGTGGACTGAGTAGAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301258.5 |
||
| CDS GCA 90 bp | TGCAGTTCTCCACCTGCAGGCAGTCCTCGTTGCTCACCTGGGCTTTaGAGGAGTAGCACAGCAGGGCAGTGCTTAAGTCGCACCCAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: CSSPPAGSPRCSPGL*RSSTAGQCLSRTQF Trigger: GAACTGGGTGCGACTTAAGCACTGCCCTGCTGTGCTACTCCTGCAAAGCCCAGGTGAGCAACGAGGACTGCCTGCAGGTGGAGAACTGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000505305.1 ENST00000510969.1 |
||
| CDS CCA 90 bp | GCCTGCCATCAACAGGGCAAGCAGCACAGCCTTCGTGGTCACTGGTaGGCTGTGGTGGAGAGGGCCTCAGGTGACTTTATATGGCCTCAA | + |
|
Preference number: 5 (lower is better) Translates to: ACHQQGKQHSLRGHW*AVVERASGDFIWPQ Trigger: TTGAGGCCATATAAAGTCACCTGAGGCCCTCTCCACCACAGCCCACCAGTGACCACGAAGGCTGTGCTGCTTGCCCTGTTGATGGCAGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000513264.1 |
||
| CDS CCA 90 bp | CAAGCCTGCCATCAACAGGGCAAGCAGCACAGCCTTCGTGGTCACTaGTGGGCTGTGGTGGAGAGGGCCTCAGGTGACTTTATATGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: QACHQQGKQHSLRGH*WAVVERASGDFIWP Trigger: AGGCCATATAAAGTCACCTGAGGCCCTCTCCACCACAGCCCACCAGTGACCACGAAGGCTGTGCTGCTTGCCCTGTTGATGGCAGGCTTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000513264.1 |
||
| CDS GCA 90 bp | GTGCGGGACGGGTCGGGGACAGGTGGAAGGAAAACAGCACACAGATaGGGACAGATGGCCAGAAAGATTAATAGTTCAGTGGCAGAGACC | + |
|
Preference number: 5 (lower is better) Translates to: VRDGSGTGGRKTAHR*GQMARKINSSVAET Trigger: GGTCTCTGCCACTGAACTATTAATCTTTCTGGCCATCTGTCCGCATCTGTGTGCTGTTTTCCTTCCACCTGTCCCCGACCCGTCCCGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000505305.1 ENST00000513264.1 |
||
| CDS-3UTR CAA 90 bp | GTTCTACTCAGTCCACTTCATCTCAGCCTTTACCGGGCCCTCCTGAGTGCCTGTTTCAAGCTGCAGCCTTaGCTGATGACGGTCAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: VLLSPLHLSLYRALLSACFKLQP*LMTVRR Trigger: CCTCCTGACCGTCATCAGCAAAGGCTGCAGCTTGAA...ACAGGCACTCAGGAGGGCCCGGTAAAGGCTGAGATGAAGTGGACTGAGTAGAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301258.5 |
||
| CDS CCA 90 bp | GGTCGGGGACAGGTGGAAGGAAAACAGCACACAGATGCGGACAGATaGCCAGAAAGATTAATAGTTCAGTGGCAGAGACCTAGGCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: GRGQVEGKQHTDADR*PERLIVQWQRPRPG Trigger: GCCAGGCCTAGGTCTCTGCCACTGAACTATTAATCTTTCTGGCCATCTGTCCGCATCTGTGTGCTGTTTTCCTTCCACCTGTCCCCGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000505305.1 ENST00000513264.1 |
||
| CDS TCA 90 bp | GGTGTCACAGCACGTGATGTTCTTCTTGCCCACGTAGTAGTCCTGTaGGTCATCCACGCAGTTCAAGCTGCAGCCTTTGCTGATGACGGT | + |
|
Preference number: 5 (lower is better) Translates to: GVTARDVLLAHVVVL*VIHAVQAAAFADDG Trigger: ACCGTCATCAGCAAAGGCTGCAGCTTGAACTGCGTGGATGACTCACAGGACTACTACGTGGGCAAGAAGAACATCACGTGCTGTGACACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000301258.5 ENST00000510969.1 |
||
| CDS-3UTR CAA 90 bp | GTGGAAGGAAAACAGCACACAGATGCGGACAGATGGCCAGAAAGATTAATAGTTTGCAGGCAGTCCTCGTaGCTCACCTGGGCTTTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: VEGKQHTDADRWPERLIVCRQSS*LTWALQ Trigger: CTGCAAAGCCCAGGTGAGCAACGAGGACTGCCTGCA...AACTATTAATCTTTCTGGCCATCTGTCCGCATCTGTGTGCTGTTTTCCTTCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000513264.1 |
||
| CDS GCA 72 bp | AGGAGGCCAACTGCGCGGATGCGCGCGGTCCAGCACTaGTCCCCCAGCTGGGTGCAGTTCTCCACCTGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: RRPTARMRAVQH*SPSWVQFSTCR Trigger: CCTGCAGGTGGAGAACTGCACCCAGCTGGGGGAGCAGTGCTGGACCGCGCGCATCCGCGCAGTTGGCCTCCT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000301258.5 ENST00000510969.1 |
||
| CDS TCA 72 bp | CGCATCAGAAACTGCACCGGGAAGACCGTCCTGGGCTaGTCGGCACGAAACCCTGGGCGCCTGTGGCTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: RIRNCTGKTVLG*SARNPGRLWLP Trigger: GGGCAGCCACAGGCGCCCAGGGTTTCGTGCCGATCAGCCCAGGACGGTCTTCCCGGTGCAGTTTCTGATGCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000505305.1 ENST00000510969.1 |
||
| CDS CCA 72 bp | CTCCCCGCATCAGAAACTGCACCGGGAAGACCGTCCTaGGCTGATCGGCACGAAACCCTGGGCGCCTGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: LPASETAPGRPS*ADRHETLGACG Trigger: GCCACAGGCGCCCAGGGTTTCGTGCCGATCAGCCCAGGACGGTCTTCCCGGTGCAGTTTCTGATGCGGGGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000505305.1 ENST00000510969.1 |
||
| CDS TCA 72 bp | GGACCCCAGCTAAGTAAGGGGGTCAAGCAGGCGGGCTaGGCACTGGTCCTGGTGACCGGAAGGCAGCACTGC | + |
|
Preference number: 6 (lower is better) Translates to: GPQLSKGVKQAG*ALVLVTGRQHC Trigger: GCAGTGCTGCCTTCCGGTCACCAGGACCAGTGCTCAGCCCGCCTGCTTGACCCCCTTACTTAGCTGGGGTCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000505305.1 ENST00000510969.1 |
||
| CDS CAA 72 bp | GCAGCAGCCGGCTGCAGGGCATGGGCCCCGCTGGCGTaGCACAAGTCGGTGTCACAGCACGTGATGTTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: AAAGCRAWAPLA*HKSVSQHVMFF Trigger: GAAGAACATCACGTGCTGTGACACCGACTTGTGCAACGCCAGCGGGGCCCATGCCCTGCAGCCGGCTGCTGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000301258.5 ENST00000510969.1 |
||
| CDS CCA 72 bp | TCCTGTCCCACCCTGCCTAATGCTCTAGAGTCCCCCTaGGCTGGCCTCAGGATTGCAAGCAGTGCGAGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: SCPTLPNALESP*AGLRIASSARA Trigger: GGCCCTCGCACTGCTTGCAATCCTGAGGCCAGCCCAGGGGGACTCTAGAGCATTAGGCAGGGTGGGACAGGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000505305.1 |
||
| CDS CCA 72 bp | AGCCTGCCATCAACAGGGCAAGCAGCACAGCCTTCGTaGTCACTGGTGGGCTGTGGTGGAGAGGGCCTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: SLPSTGQAAQPS*SLVGCGGEGLR Trigger: CCTGAGGCCCTCTCCACCACAGCCCACCAGTGACCACGAAGGCTGTGCTGCTTGCCCTGTTGATGGCAGGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000513264.1 |
||
| CDS CCA 72 bp | AGGATTGCAAGCAGTGCGAGGGCCTGGTCTCGGCCCTaGTCTCAGCCCTATCCAGATGTCCGAGGCAGATGG | + |
|
Preference number: 6 (lower is better) Translates to: RIASSARAWSRP*SQPYPDVRGRW Trigger: CCATCTGCCTCGGACATCTGGATAGGGCTGAGACCAGGGCCGAGACCAGGCCCTCGCACTGCTTGCAATCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505305.1 |
||
| CDS GCA 72 bp | CCACCTGCAGGCAGTCCTCGTTGCTCACCTGGGCTTTaGAGGAGTAGCACAGCAGGGCAGTGCTTAAGTCGC | + |
|
Preference number: 6 (lower is better) Translates to: PPAGSPRCSPGL*RSSTAGQCLSR Trigger: GCGACTTAAGCACTGCCCTGCTGTGCTACTCCTGCAAAGCCCAGGTGAGCAACGAGGACTGCCTGCAGGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000505305.1 ENST00000510969.1 |
||
| CDS CCA 72 bp | GCAAGCAGCACAGCCTTCGTGGTCACTGGTGGGCTGTaGTGGAGAGGGCCTCAGGTGACTTTATATGGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: ASSTAFVVTGGL*WRGPQVTLYGL Trigger: GAGGCCATATAAAGTCACCTGAGGCCCTCTCCACCACAGCCCACCAGTGACCACGAAGGCTGTGCTGCTTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000513264.1 |
||
| CDS CAA 72 bp | TCCTGTGAGTCATCCACGCAGTTCAAGCTGCAGCCTTaGCTGATGACGGTCAGGAGGCCAACTGCGCGGATG | + |
|
Preference number: 6 (lower is better) Translates to: SCESSTQFKLQP*LMTVRRPTARM Trigger: CATCCGCGCAGTTGGCCTCCTGACCGTCATCAGCAAAGGCTGCAGCTTGAACTGCGTGGATGACTCACAGGA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000301258.5 ENST00000510969.1 |
||
| CDS TCA 72 bp | CCCCGCTGGCGTTGCACAAGTCGGTGTCACAGCACGTaGTGTTCTTCTTGCCCACGTAGTAGTCCTGTGAGT | + |
|
Preference number: 6 (lower is better) Translates to: PRWRCTSRCHST*CSSCPRSSPVS Trigger: ACTCACAGGACTACTACGTGGGCAAGAAGAACATCACGTGCTGTGACACCGACTTGTGCAACGCCAGCGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000301258.5 ENST00000510969.1 |
||
| CDS CCA 72 bp | AGCAGCACAGCCTTCGTGGTCACTGGTGGGCTGTGGTaGAGAGGGCCTCAGGTGACTTTATATGGCCTCAAA | + |
|
Preference number: 6 (lower is better) Translates to: SSTAFVVTGGLW*RGPQVTLYGLK Trigger: TTTGAGGCCATATAAAGTCACCTGAGGCCCTCTCCACCACAGCCCACCAGTGACCACGAAGGCTGTGCTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000513264.1 |
||
| CDS TCA 72 bp | GCACGTGATGTTCTTCTTGCCCACGTAGTAGTCCTGTaGGTCATCCACGCAGTTCAAGCTGCAGCCTTTGCT | + |
|
Preference number: 6 (lower is better) Translates to: ARDVLLAHVVVL*VIHAVQAAAFA Trigger: AGCAAAGGCTGCAGCTTGAACTGCGTGGATGACTCACAGGACTACTACGTGGGCAAGAAGAACATCACGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000301258.5 ENST00000510969.1 |
||
| CDS CCA 72 bp | CAGGTGGAAGGAAAACAGCACACAGATGCGGACAGATaGCCAGAAAGATTAATAGTTCAGTGGCAGAGACCT | + |
|
Preference number: 6 (lower is better) Translates to: QVEGKQHTDADR*PERLIVQWQRP Trigger: AGGTCTCTGCCACTGAACTATTAATCTTTCTGGCCATCTGTCCGCATCTGTGTGCTGTTTTCCTTCCACCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000505305.1 ENST00000513264.1 |
||
| CDS CCA 72 bp | TTCAAATCCCATCGTCTGAATCATCTAAATTGGGTATaGATTGGACCCCAGCTAAGTAAGGGGGTCAAGCAG | + |
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Preference number: 6 (lower is better) Translates to: FKSHRLNHLNWV*IGPQLSKGVKQ Trigger: CTGCTTGACCCCCTTACTTAGCTGGGGTCCAATCCATACCCAATTTAGATGATTCAGACGATGGGATTTGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000505305.1 ENST00000510969.1 |
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