Pregenerated sensors for PRRG4 (Homo sapiens)
Ensembl gene IDs: ENSG00000135378Ensembl transcript IDs: ENST00000257836.4
Found 75 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTGATAATGATCAAGTTCAGGTCCAAGATGCAGACAGAACTTCTGTaGTACAGTACATGGACTTATTCTTCCTTTATTCCTTGCAGTTTG | + |
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Preference number: 1 (lower is better) Translates to: LIMIKFRSKMQTELL*YSTWTYSSFIPCSL Trigger: CAAACTGCAAGGAATAAAGGAAGAATAAGTCCATGTACTGTACCACAGAAGTTCTGTCTGCATCTTGGACCTGAACTTGATCATTATCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000257836.4 |
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| 3UTR CCA 90 bp | ATGGACTTATTCTTCCTTTATTCCTTGCAGTTTGTCATAAAAAGTTaGATAGTCATGTCTTTTGTGGTCTTCTTCTTCTTCTTCTTCTCC | + |
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Preference number: 1 (lower is better) Translates to: MDLFFLYSLQFVIKS*IVMSFVVFFFFFFS Trigger: GGAGAAGAAGAAGAAGAAGAAGACCACAAAAGACATGACTATCCAACTTTTTATGACAAACTGCAAGGAATAAAGGAAGAATAAGTCCAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000257836.4 |
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| 3UTR-3UTR TCA 90 bp | ATTCAAGTTAGAGCAACTGCTTTACACAAAATGATAGCAGTAGACAAATCTAGGTGGAATGCAGTGGCGTaGTCTCAGCTTACTGCAACC | + |
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Preference number: 2 (lower is better) Translates to: IQVRATALHKMIAVDKSRWNAVA*SQLTAT Trigger: GGTTGCAGTAAGCTGAGATCACGCCACTGCATTCCA...CCTAGATTTGTCTACTGCTATCATTTTGTGTAAAGCAGTTGCTCTAACTTGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000257836.4 |
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| 3UTR-3UTR GCA 90 bp | TATAGAGTCAAAAAGTCTCTTATCAAGCTGATAATGATCAAGTTCAGGTCCAAGGTGATCTCAGCTTACTaGAACCTCTGCCTCCCAGGT | + |
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Preference number: 2 (lower is better) Translates to: YRVKKSLIKLIMIKFRSKVISAY*NLCLPG Trigger: ACCTGGGAGGCAGAGGTTGCAGTAAGCTGAGATCAC...CTTGGACCTGAACTTGATCATTATCAGCTTGATAAGAGACTTTTTGACTCTATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000257836.4 |
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| 3UTR-3UTR GCA 90 bp | ATTCAAGTTAGAGCAACTGCTTTACACAAAATGATAGCAGTAGACAAATCTAGGAGTTCAGGTCCAAGATaGAGACAGAACTTCTGTGGT | + |
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Preference number: 2 (lower is better) Translates to: IQVRATALHKMIAVDKSRSSGPR*RQNFCG Trigger: ACCACAGAAGTTCTGTCTGCATCTTGGACCTGAACT...CCTAGATTTGTCTACTGCTATCATTTTGTGTAAAGCAGTTGCTCTAACTTGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000257836.4 |
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| 3UTR CAA 90 bp | AGAACTTCTGTGGTACAGTACATGGACTTATTCTTCCTTTATTCCTaGCAGTTTGTCATAAAAAGTTGGATAGTCATGTCTTTTGTGGTC | + |
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Preference number: 2 (lower is better) Translates to: RTSVVQYMDLFFLYS*QFVIKSWIVMSFVV Trigger: GACCACAAAAGACATGACTATCCAACTTTTTATGACAAACTGCAAGGAATAAAGGAAGAATAAGTCCATGTACTGTACCACAGAAGTTCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000257836.4 |
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| 3UTR-3UTR CCA 90 bp | TATAGAGTCAAAAAGTCTCTTATCAAGCTGATAATGATCAAGTTCAGGTCCAAGCAGACAGAACTTCTGTaGTACAGTACATGGACTTAT | + |
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Preference number: 2 (lower is better) Translates to: YRVKKSLIKLIMIKFRSKQTELL*YSTWTY Trigger: ATAAGTCCATGTACTGTACCACAGAAGTTCTGTCTG...CTTGGACCTGAACTTGATCATTATCAGCTTGATAAGAGACTTTTTGACTCTATA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000257836.4 |
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| 3UTR CAA 90 bp | CATGGACTTATTCTTCCTTTATTCCTTGCAGTTTGTCATAAAAAGTaGGATAGTCATGTCTTTTGTGGTCTTCTTCTTCTTCTTCTTCTC | + |
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Preference number: 2 (lower is better) Translates to: HGLILPLFLAVCHKK*DSHVFCGLLLLLLL Trigger: GAGAAGAAGAAGAAGAAGAAGACCACAAAAGACATGACTATCCAACTTTTTATGACAAACTGCAAGGAATAAAGGAAGAATAAGTCCATG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000257836.4 |
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| 3UTR-3UTR GCA 90 bp | ATTCAAGTTAGAGCAACTGCTTTACACAAAATGATAGCAGTAGACAAATCTAGGTCACATGAGCAAAAGTaGTTATGTAAAGCCAAGACA | + |
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Preference number: 2 (lower is better) Translates to: IQVRATALHKMIAVDKSRSHEQK*LCKAKT Trigger: TGTCTTGGCTTTACATAAGCACTTTTGCTCATGTGA...CCTAGATTTGTCTACTGCTATCATTTTGTGTAAAGCAGTTGCTCTAACTTGAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000257836.4 |
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| 3UTR-3UTR CCA 90 bp | ATTCAAGTTAGAGCAACTGCTTTACACAAAATGATAGCAGTAGACAAATCTAGGCTGTGGTACAGTACATaGACTTATTCTTCCTTTATT | + |
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Preference number: 2 (lower is better) Translates to: IQVRATALHKMIAVDKSRLWYST*TYSSFI Trigger: AATAAAGGAAGAATAAGTCCATGTACTGTACCACAG...CCTAGATTTGTCTACTGCTATCATTTTGTGTAAAGCAGTTGCTCTAACTTGAAT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000257836.4 |
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| 3UTR-3UTR CAA 90 bp | ATTCAAGTTAGAGCAACTGCTTTACACAAAATGATAGCAGTAGACAAATCTAGGGGAGTATGTTATTTCTaGAGCTCCTGGAAGAGGAAA | + |
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Preference number: 3 (lower is better) Translates to: IQVRATALHKMIAVDKSRGVCYF*SSWKRK Trigger: TTTCCTCTTCCAGGAGCTCAAGAAATAACATACTCC...CCTAGATTTGTCTACTGCTATCATTTTGTGTAAAGCAGTTGCTCTAACTTGAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000257836.4 |
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| 3UTR-3UTR CAA 90 bp | ATTCAAGTTAGAGCAACTGCTTTACACAAAATGATAGCAGTAGACAAATCTAGGATCAAACATGTGGGTTaGCAGTCTCACTCCTGTAAA | + |
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Preference number: 3 (lower is better) Translates to: IQVRATALHKMIAVDKSRIKHVG*QSHSCK Trigger: TTTACAGGAGTGAGACTGCAAACCCACATGTTTGAT...CCTAGATTTGTCTACTGCTATCATTTTGTGTAAAGCAGTTGCTCTAACTTGAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000257836.4 |
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| CDS-3UTR CCA 90 bp | ATCAAGTTCAGGTCCAAGATGCAGACAGAACTTCTGTGGTACAGTACATGGACTTCCGCAGGGTCTGGATaGCCCCCGCGCGCAAACCTG | + |
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Preference number: 4 (lower is better) Translates to: IKFRSKMQTELLWYSTWTSAGSG*PPRANL Trigger: CAGGTTTGCGCGCGGGGGCCATCCAGACCCTGCGGA...AGTCCATGTACTGTACCACAGAAGTTCTGTCTGCATCTTGGACCTGAACTTGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000257836.4 |
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| CDS-3UTR CCA 90 bp | ATCAAGTTCAGGTCCAAGATGCAGACAGAACTTCTGTGGTACAGTACATGGACTGCCAGAGGCTCTTCTTaGGGCGGTTCCTTCGGCCGC | + |
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Preference number: 4 (lower is better) Translates to: IKFRSKMQTELLWYSTWTARGSS*GGSFGR Trigger: GCGGCCGAAGGAACCGCCCCAAGAAGAGCCTCTGGC...AGTCCATGTACTGTACCACAGAAGTTCTGTCTGCATCTTGGACCTGAACTTGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000257836.4 |
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| CDS-3UTR TCA 90 bp | ATTCAAGTTAGAGCAACTGCTTTACACAAAATGATAGCAGTAGACAAATCTAGGGGAACACGCGCGGGGTaGGGTCCTGCCTCGGTCCGG | + |
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Preference number: 4 (lower is better) Translates to: IQVRATALHKMIAVDKSRGTRAG*GPASVR Trigger: CCGGACCGAGGCAGGACCTCACCCCGCGCGTGTTCC...CCTAGATTTGTCTACTGCTATCATTTTGTGTAAAGCAGTTGCTCTAACTTGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000257836.4 |
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| CDS-3UTR TCA 90 bp | ATCAAGTTCAGGTCCAAGATGCAGACAGAACTTCTGTGGTACAGTACATGGACTAGGCGGAGGTTGCAGTaGGCCATGATCACTCCACTG | + |
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Preference number: 4 (lower is better) Translates to: IKFRSKMQTELLWYSTWTRRRLQ*AMITPL Trigger: CAGTGGAGTGATCATGGCTCACTGCAACCTCCGCCT...AGTCCATGTACTGTACCACAGAAGTTCTGTCTGCATCTTGGACCTGAACTTGAT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000257836.4 |
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| CDS-3UTR CCA 90 bp | TATAGAGTCAAAAAGTCTCTTATCAAGCTGATAATGATCAAGTTCAGGTCCAAGCCCCGCGCGCAAACCTaGGAAGGGCCTGGGGTTCGC | + |
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Preference number: 4 (lower is better) Translates to: YRVKKSLIKLIMIKFRSKPRAQT*EGPGVR Trigger: GCGAACCCCAGGCCCTTCCCAGGTTTGCGCGCGGGG...CTTGGACCTGAACTTGATCATTATCAGCTTGATAAGAGACTTTTTGACTCTATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000257836.4 |
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| CDS-3UTR TCA 90 bp | ATCAAGTTCAGGTCCAAGATGCAGACAGAACTTCTGTGGTACAGTACATGGACTGGACCTCTTGCGCAATaGGGAAACCCCAGGGTAACT | + |
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Preference number: 4 (lower is better) Translates to: IKFRSKMQTELLWYSTWTGPLAQ*GNPRVT Trigger: AGTTACCCTGGGGTTTCCTCATTGCGCAAGAGGTCC...AGTCCATGTACTGTACCACAGAAGTTCTGTCTGCATCTTGGACCTGAACTTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000257836.4 |
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| CDS-3UTR CCA 90 bp | TATAGAGTCAAAAAGTCTCTTATCAAGCTGATAATGATCAAGTTCAGGTCCAAGAACCTGGGAAGGGCCTaGGGTTCGCAGAGGGGCGCC | + |
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Preference number: 4 (lower is better) Translates to: YRVKKSLIKLIMIKFRSKNLGRA*GSQRGA Trigger: GGCGCCCCTCTGCGAACCCCAGGCCCTTCCCAGGTT...CTTGGACCTGAACTTGATCATTATCAGCTTGATAAGAGACTTTTTGACTCTATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000257836.4 |
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| CDS-3UTR CCA 90 bp | ATTCAAGTTAGAGCAACTGCTTTACACAAAATGATAGCAGTAGACAAATCTAGGGCTCTCCGCAGGGTCTaGATGGCCCCCGCGCGCAAA | + |
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Preference number: 4 (lower is better) Translates to: IQVRATALHKMIAVDKSRALRRV*MAPARK Trigger: TTTGCGCGCGGGGGCCATCCAGACCCTGCGGAGAGC...CCTAGATTTGTCTACTGCTATCATTTTGTGTAAAGCAGTTGCTCTAACTTGAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000257836.4 |
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| CDS-3UTR TCA 90 bp | ATCAAGTTCAGGTCCAAGATGCAGACAGAACTTCTGTGGTACAGTACATGGACTCTAGGTTGCCGGGAGTaGAGAGCTCCAGATCAAATC | + |
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Preference number: 4 (lower is better) Translates to: IKFRSKMQTELLWYSTWTLGCRE*RAPDQI Trigger: GATTTGATCTGGAGCTCTTCACTCCCGGCAACCTAG...AGTCCATGTACTGTACCACAGAAGTTCTGTCTGCATCTTGGACCTGAACTTGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000257836.4 |
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| CDS-3UTR GCA 90 bp | ATCAAGTTCAGGTCCAAGATGCAGACAGAACTTCTGTGGTACAGTACATGGACTGTGATCTCAGCTTACTaGAACCTCTGCCTCCCAGGT | + |
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Preference number: 4 (lower is better) Translates to: IKFRSKMQTELLWYSTWTVISAY*NLCLPG Trigger: ACCTGGGAGGCAGAGGTTGCAGTAAGCTGAGATCAC...AGTCCATGTACTGTACCACAGAAGTTCTGTCTGCATCTTGGACCTGAACTTGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000257836.4 |
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| CDS-3UTR TCA 90 bp | TATAGAGTCAAAAAGTCTCTTATCAAGCTGATAATGATCAAGTTCAGGTCCAAGACTCCTGACCTCAGGTaGTCCGCCCACCTATCCCTC | + |
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Preference number: 4 (lower is better) Translates to: YRVKKSLIKLIMIKFRSKTPDLR*SAHLSL Trigger: GAGGGATAGGTGGGCGGATCACCTGAGGTCAGGAGT...CTTGGACCTGAACTTGATCATTATCAGCTTGATAAGAGACTTTTTGACTCTATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000257836.4 |
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| CDS-3UTR TCA 90 bp | ATCAAGTTCAGGTCCAAGATGCAGACAGAACTTCTGTGGTACAGTACATGGACTGGTTGGTCCTTTAGCTaGATATTCCTGCCAAAATGC | + |
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Preference number: 4 (lower is better) Translates to: IKFRSKMQTELLWYSTWTGWSFS*IFLPKC Trigger: GCATTTTGGCAGGAATATTCAGCTAAAGGACCAACC...AGTCCATGTACTGTACCACAGAAGTTCTGTCTGCATCTTGGACCTGAACTTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000257836.4 |
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| CDS-3UTR TCA 90 bp | ATTCAAGTTAGAGCAACTGCTTTACACAAAATGATAGCAGTAGACAAATCTAGGGGTGGGAGGATTGCTTaGGCCCCGAAGTTCAGGCTA | + |
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Preference number: 4 (lower is better) Translates to: IQVRATALHKMIAVDKSRGGRIA*APKFRL Trigger: TAGCCTGAACTTCGGGGCTCAAGCAATCCTCCCACC...CCTAGATTTGTCTACTGCTATCATTTTGTGTAAAGCAGTTGCTCTAACTTGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000257836.4 |
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| CDS-3UTR GCA 90 bp | ATCAAGTTCAGGTCCAAGATGCAGACAGAACTTCTGTGGTACAGTACATGGACTCTAAATCCTTTTGTGTaGCCAGGATATGGTGGTGGT | + |
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Preference number: 4 (lower is better) Translates to: IKFRSKMQTELLWYSTWTLNPFV*PGYGGG Trigger: ACCACCACCATATCCTGGGCACACAAAAGGATTTAG...AGTCCATGTACTGTACCACAGAAGTTCTGTCTGCATCTTGGACCTGAACTTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000257836.4 |
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| CDS-3UTR CCA 90 bp | TATAGAGTCAAAAAGTCTCTTATCAAGCTGATAATGATCAAGTTCAGGTCCAAGCACAGAAGGCGGCAATaGAGACAAGGCAGCCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: YRVKKSLIKLIMIKFRSKHRRRQ*RQGSLL Trigger: GAGGAGGCTGCCTTGTCTCCATTGCCGCCTTCTGTG...CTTGGACCTGAACTTGATCATTATCAGCTTGATAAGAGACTTTTTGACTCTATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000257836.4 |
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| CDS-3UTR TCA 90 bp | TATAGAGTCAAAAAGTCTCTTATCAAGCTGATAATGATCAAGTTCAGGTCCAAGGGTGGGTGGATTCCTTaGGCTCAGGAGTTAGAGACC | + |
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Preference number: 4 (lower is better) Translates to: YRVKKSLIKLIMIKFRSKGGWIP*AQELET Trigger: GGTCTCTAACTCCTGAGCTCAAGGAATCCACCCACC...CTTGGACCTGAACTTGATCATTATCAGCTTGATAAGAGACTTTTTGACTCTATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000257836.4 |
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| CDS-3UTR TCA 90 bp | TATAGAGTCAAAAAGTCTCTTATCAAGCTGATAATGATCAAGTTCAGGTCCAAGGGTTGCAGTGAGCCATaGTCACTCCACTGCACTCCA | + |
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Preference number: 4 (lower is better) Translates to: YRVKKSLIKLIMIKFRSKGCSEP*SLHCTP Trigger: TGGAGTGCAGTGGAGTGATCATGGCTCACTGCAACC...CTTGGACCTGAACTTGATCATTATCAGCTTGATAAGAGACTTTTTGACTCTATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000257836.4 |
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| CDS-3UTR GCA 90 bp | ATTCAAGTTAGAGCAACTGCTTTACACAAAATGATAGCAGTAGACAAATCTAGGACAAATCTAGGCAGCTaGTTGGGTGGGGTGGGGTTC | + |
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Preference number: 4 (lower is better) Translates to: IQVRATALHKMIAVDKSRTNLGS*LGGVGF Trigger: GAACCCCACCCCACCCAAGCAGCTGCCTAGATTTGT...CCTAGATTTGTCTACTGCTATCATTTTGTGTAAAGCAGTTGCTCTAACTTGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000257836.4 |
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| CDS-3UTR GCA 90 bp | ATCAAGTTCAGGTCCAAGATGCAGACAGAACTTCTGTGGTACAGTACATGGACTCATGGAGGACACTGTTaGTCTGCAGGTTTTAATTGT | + |
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Preference number: 4 (lower is better) Translates to: IKFRSKMQTELLWYSTWTHGGHC*SAGFNC Trigger: ACAATTAAAACCTGCAGAGCAACAGTGTCCTCCATG...AGTCCATGTACTGTACCACAGAAGTTCTGTCTGCATCTTGGACCTGAACTTGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000257836.4 |
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| CDS-3UTR CCA 90 bp | ATCAAGTTCAGGTCCAAGATGCAGACAGAACTTCTGTGGTACAGTACATGGACTGAACTATCAAACATGTaGGTTTGCAGTCTCACTCCT | + |
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Preference number: 4 (lower is better) Translates to: IKFRSKMQTELLWYSTWTELSNM*VCSLTP Trigger: AGGAGTGAGACTGCAAACCCACATGTTTGATAGTTC...AGTCCATGTACTGTACCACAGAAGTTCTGTCTGCATCTTGGACCTGAACTTGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000257836.4 |
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| CDS-3UTR GCA 90 bp | TATAGAGTCAAAAAGTCTCTTATCAAGCTGATAATGATCAAGTTCAGGTCCAAGCTATCCCTCCCAAAGTaGTGGGATTACAGGCGTGAG | + |
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Preference number: 4 (lower is better) Translates to: YRVKKSLIKLIMIKFRSKLSLPK*WDYRRE Trigger: CTCACGCCTGTAATCCCAGCACTTTGGGAGGGATAG...CTTGGACCTGAACTTGATCATTATCAGCTTGATAAGAGACTTTTTGACTCTATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000257836.4 |
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| CDS-3UTR CCA 90 bp | TATAGAGTCAAAAAGTCTCTTATCAAGCTGATAATGATCAAGTTCAGGTCCAAGGTAACTGTGGGCAGTTaGCTGAGTAGAACCAGAAGC | + |
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Preference number: 4 (lower is better) Translates to: YRVKKSLIKLIMIKFRSKVTVGS*LSRTRS Trigger: GCTTCTGGTTCTACTCAGCCAACTGCCCACAGTTAC...CTTGGACCTGAACTTGATCATTATCAGCTTGATAAGAGACTTTTTGACTCTATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000257836.4 |
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| CDS-3UTR TCA 90 bp | TATAGAGTCAAAAAGTCTCTTATCAAGCTGATAATGATCAAGTTCAGGTCCAAGAAGTTCAGGCTACAGTaGGTTGTGATTGCACCACTG | + |
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Preference number: 4 (lower is better) Translates to: YRVKKSLIKLIMIKFRSKKFRLQ*VVIAPL Trigger: CAGTGGTGCAATCACAACTCACTGTAGCCTGAACTT...CTTGGACCTGAACTTGATCATTATCAGCTTGATAAGAGACTTTTTGACTCTATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000257836.4 |
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| CDS-3UTR GCA 90 bp | ATTCAAGTTAGAGCAACTGCTTTACACAAAATGATAGCAGTAGACAAATCTAGGACTTCTTCTCCCGCATaGTTAGAAGCCTTTGGACCT | + |
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Preference number: 4 (lower is better) Translates to: IQVRATALHKMIAVDKSRTSSPA*LEAFGP Trigger: AGGTCCAAAGGCTTCTAAGCATGCGGGAGAAGAAGT...CCTAGATTTGTCTACTGCTATCATTTTGTGTAAAGCAGTTGCTCTAACTTGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000257836.4 |
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| CDS-3UTR GCA 90 bp | ATCAAGTTCAGGTCCAAGATGCAGACAGAACTTCTGTGGTACAGTACATGGACTGATCTCCACATTGGATaGTCTATAAATATCACAATC | + |
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Preference number: 4 (lower is better) Translates to: IKFRSKMQTELLWYSTWTDLHIG*SINITI Trigger: GATTGTGATATTTATAGAGCATCCAATGTGGAGATC...AGTCCATGTACTGTACCACAGAAGTTCTGTCTGCATCTTGGACCTGAACTTGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000257836.4 |
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| CDS-3UTR GCA 90 bp | TATAGAGTCAAAAAGTCTCTTATCAAGCTGATAATGATCAAGTTCAGGTCCAAGAAAATTTGCAAGGCGTaGTGGCAGGTGCCTGTAATG | + |
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Preference number: 4 (lower is better) Translates to: YRVKKSLIKLIMIKFRSKKICKA*WQVPVM Trigger: CATTACAGGCACCTGCCAGCACGCCTTGCAAATTTT...CTTGGACCTGAACTTGATCATTATCAGCTTGATAAGAGACTTTTTGACTCTATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000257836.4 |
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| CDS-3UTR CCA 90 bp | ATTCAAGTTAGAGCAACTGCTTTACACAAAATGATAGCAGTAGACAAATCTAGGATGCTTAGAAGCCTTTaGACCTCTTGCGCAATGAGG | + |
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Preference number: 4 (lower is better) Translates to: IQVRATALHKMIAVDKSRMLRSL*TSCAMR Trigger: CCTCATTGCGCAAGAGGTCCAAAGGCTTCTAAGCAT...CCTAGATTTGTCTACTGCTATCATTTTGTGTAAAGCAGTTGCTCTAACTTGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000257836.4 |
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| CDS-3UTR CCA 90 bp | TATAGAGTCAAAAAGTCTCTTATCAAGCTGATAATGATCAAGTTCAGGTCCAAGAAACACTGTGTTTTCTaGTCAGCGCCACTGCCTGTT | + |
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Preference number: 4 (lower is better) Translates to: YRVKKSLIKLIMIKFRSKKHCVF*SAPLPV Trigger: AACAGGCAGTGGCGCTGACCAGAAAACACAGTGTTT...CTTGGACCTGAACTTGATCATTATCAGCTTGATAAGAGACTTTTTGACTCTATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000257836.4 |
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| CDS-3UTR TCA 90 bp | TATAGAGTCAAAAAGTCTCTTATCAAGCTGATAATGATCAAGTTCAGGTCCAAGATATGGTGGTGGTGGTaGAACACTGTGTTTTCTGGT | + |
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Preference number: 4 (lower is better) Translates to: YRVKKSLIKLIMIKFRSKIWWWW*NTVFSG Trigger: ACCAGAAAACACAGTGTTTCACCACCACCACCATAT...CTTGGACCTGAACTTGATCATTATCAGCTTGATAAGAGACTTTTTGACTCTATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000257836.4 |
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| CDS-3UTR GCA 90 bp | TATAGAGTCAAAAAGTCTCTTATCAAGCTGATAATGATCAAGTTCAGGTCCAAGGGGACTAGAAAAGTGTaGTCACTCATTCTAAACCCA | + |
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Preference number: 4 (lower is better) Translates to: YRVKKSLIKLIMIKFRSKGTRKV*SLILNP Trigger: TGGGTTTAGAATGAGTGAGCACACTTTTCTAGTCCC...CTTGGACCTGAACTTGATCATTATCAGCTTGATAAGAGACTTTTTGACTCTATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000257836.4 |
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| CDS-3UTR GCA 90 bp | ATTCAAGTTAGAGCAACTGCTTTACACAAAATGATAGCAGTAGACAAATCTAGGTGCAAAGTTCTTCATTaGACTCTCTTTCTAGGTTGC | + |
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Preference number: 4 (lower is better) Translates to: IQVRATALHKMIAVDKSRCKVLH*TLFLGC Trigger: GCAACCTAGAAAGAGAGTGCAATGAAGAACTTTGCA...CCTAGATTTGTCTACTGCTATCATTTTGTGTAAAGCAGTTGCTCTAACTTGAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000257836.4 |
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| CDS-3UTR GCA 90 bp | ATTCAAGTTAGAGCAACTGCTTTACACAAAATGATAGCAGTAGACAAATCTAGGTCAAACATGTGGGTTTaGAGTCTCACTCCTGTAAAA | + |
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Preference number: 4 (lower is better) Translates to: IQVRATALHKMIAVDKSRSNMWV*SLTPVK Trigger: TTTTACAGGAGTGAGACTGCAAACCCACATGTTTGA...CCTAGATTTGTCTACTGCTATCATTTTGTGTAAAGCAGTTGCTCTAACTTGAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000257836.4 |
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| CDS-3UTR GCA 90 bp | ATTCAAGTTAGAGCAACTGCTTTACACAAAATGATAGCAGTAGACAAATCTAGGAAAAATACAAAAATTTaGAAGGCGTGCTGGCAGGTG | + |
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Preference number: 4 (lower is better) Translates to: IQVRATALHKMIAVDKSRKNTKI*KACWQV Trigger: CACCTGCCAGCACGCCTTGCAAATTTTTGTATTTTT...CCTAGATTTGTCTACTGCTATCATTTTGTGTAAAGCAGTTGCTCTAACTTGAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000257836.4 |
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| CDS-3UTR CCA 90 bp | ATTCAAGTTAGAGCAACTGCTTTACACAAAATGATAGCAGTAGACAAATCTAGGAGCGTAAACATAGTCTaGCAACTGTCAAACAAACTG | + |
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Preference number: 4 (lower is better) Translates to: IQVRATALHKMIAVDKSRSVNIV*QLSNKL Trigger: CAGTTTGTTTGACAGTTGCCAGACTATGTTTACGCT...CCTAGATTTGTCTACTGCTATCATTTTGTGTAAAGCAGTTGCTCTAACTTGAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000257836.4 |
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| CDS-3UTR CCA 90 bp | ATTCAAGTTAGAGCAACTGCTTTACACAAAATGATAGCAGTAGACAAATCTAGGCAGACAGAACTTCTGTaGTACAGTACATGGACTTAT | + |
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Preference number: 4 (lower is better) Translates to: IQVRATALHKMIAVDKSRQTELL*YSTWTY Trigger: ATAAGTCCATGTACTGTACCACAGAAGTTCTGTCTG...CCTAGATTTGTCTACTGCTATCATTTTGTGTAAAGCAGTTGCTCTAACTTGAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000257836.4 |
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| CDS-3UTR TCA 90 bp | ATTCAAGTTAGAGCAACTGCTTTACACAAAATGATAGCAGTAGACAAATCTAGGGTTTGCTTCTTCTTTTaGTGTAAACACTTCTTCTCC | + |
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Preference number: 4 (lower is better) Translates to: IQVRATALHKMIAVDKSRVCFFF*CKHFFS Trigger: GGAGAAGAAGTGTTTACATCAAAAGAAGAAGCAAAC...CCTAGATTTGTCTACTGCTATCATTTTGTGTAAAGCAGTTGCTCTAACTTGAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000257836.4 |
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| CDS-3UTR TCA 90 bp | ATTCAAGTTAGAGCAACTGCTTTACACAAAATGATAGCAGTAGACAAATCTAGGGAAGGCGTCTATGTATaGAAAAGTTTGCTTCTTCTT | + |
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Preference number: 4 (lower is better) Translates to: IQVRATALHKMIAVDKSREGVYV*KSLLLL Trigger: AAGAAGAAGCAAACTTTTTCATACATAGACGCCTTC...CCTAGATTTGTCTACTGCTATCATTTTGTGTAAAGCAGTTGCTCTAACTTGAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000257836.4 |
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| CDS-3UTR TCA 90 bp | TATAGAGTCAAAAAGTCTCTTATCAAGCTGATAATGATCAAGTTCAGGTCCAAGGTCCTACCAAAGGTATaGCCTTGTAAATGTGTATTT | + |
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Preference number: 4 (lower is better) Translates to: YRVKKSLIKLIMIKFRSKVLPKV*PCKCVF Trigger: AAATACACATTTACAAGGTCATACCTTTGGTAGGAC...CTTGGACCTGAACTTGATCATTATCAGCTTGATAAGAGACTTTTTGACTCTATA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000257836.4 |
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| CDS-3UTR TCA 90 bp | ATTCAAGTTAGAGCAACTGCTTTACACAAAATGATAGCAGTAGACAAATCTAGGACACATGTTTTAAAATaGCCACACAGGCAGAATCTA | + |
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Preference number: 4 (lower is better) Translates to: IQVRATALHKMIAVDKSRTHVLK*PHRQNL Trigger: TAGATTCTGCCTGTGTGGTCATTTTAAAACATGTGT...CCTAGATTTGTCTACTGCTATCATTTTGTGTAAAGCAGTTGCTCTAACTTGAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000257836.4 |
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| CDS-3UTR GCA 90 bp | TATAGAGTCAAAAAGTCTCTTATCAAGCTGATAATGATCAAGTTCAGGTCCAAGTGGCTTCCTCATAATTaGAAAGTTCTTCATTGCACT | + |
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Preference number: 4 (lower is better) Translates to: YRVKKSLIKLIMIKFRSKWLPHN*KVLHCT Trigger: AGTGCAATGAAGAACTTTGCAATTATGAGGAAGCCA...CTTGGACCTGAACTTGATCATTATCAGCTTGATAAGAGACTTTTTGACTCTATA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000257836.4 |
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| CDS-3UTR CCA 90 bp | ATTCAAGTTAGAGCAACTGCTTTACACAAAATGATAGCAGTAGACAAATCTAGGACCCGCCATCATGTCTaGCTAATTTCTTTTGTATTT | + |
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Preference number: 4 (lower is better) Translates to: IQVRATALHKMIAVDKSRTRHHV*LISFVF Trigger: AAATACAAAAGAAATTAGCCAGACATGATGGCGGGT...CCTAGATTTGTCTACTGCTATCATTTTGTGTAAAGCAGTTGCTCTAACTTGAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000257836.4 |
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| CDS-3UTR GCA 90 bp | TATAGAGTCAAAAAGTCTCTTATCAAGCTGATAATGATCAAGTTCAGGTCCAAGGGACTTACTTTTATCTaGCTTAAGATGATGCATCTT | + |
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Preference number: 4 (lower is better) Translates to: YRVKKSLIKLIMIKFRSKGLTFI*LKMMHL Trigger: AAGATGCATCATCTTAAGGCAGATAAAAGTAAGTCC...CTTGGACCTGAACTTGATCATTATCAGCTTGATAAGAGACTTTTTGACTCTATA 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000257836.4 |
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| CDS-3UTR CCA 90 bp | TATAGAGTCAAAAAGTCTCTTATCAAGCTGATAATGATCAAGTTCAGGTCCAAGCTGTGGTACAGTACATaGACTTATTCTTCCTTTATT | + |
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Preference number: 4 (lower is better) Translates to: YRVKKSLIKLIMIKFRSKLWYST*TYSSFI Trigger: AATAAAGGAAGAATAAGTCCATGTACTGTACCACAG...CTTGGACCTGAACTTGATCATTATCAGCTTGATAAGAGACTTTTTGACTCTATA 34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000257836.4 |
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| CDS CCA 90 bp | CAAACCTCGGCGACGCTCCGGGCCTCGCTCTCCGCAGGGTCTGGATaGCCCCCGCGCGCAAACCTGGGAAGGGCCTGGGGTTCGCAGAGG | + |
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Preference number: 5 (lower is better) Translates to: QTSATLRASLSAGSG*PPRANLGRAWGSQR Trigger: CCTCTGCGAACCCCAGGCCCTTCCCAGGTTTGCGCGCGGGGGCCATCCAGACCCTGCGGAGAGCGAGGCCCGGAGCGTCGCCGAGGTTTG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000257836.4 |
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| CDS CCA 90 bp | CCCTCAAACCTCGGCGACGCTCCGGGCCTCGCTCTCCGCAGGGTCTaGATGGCCCCCGCGCGCAAACCTGGGAAGGGCCTGGGGTTCGCA | + |
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Preference number: 5 (lower is better) Translates to: PSNLGDAPGLALRRV*MAPARKPGKGLGFA Trigger: TGCGAACCCCAGGCCCTTCCCAGGTTTGCGCGCGGGGGCCATCCAGACCCTGCGGAGAGCGAGGCCCGGAGCGTCGCCGAGGTTTGAGGG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000257836.4 |
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| CDS TCA 90 bp | ACTTCTTCTCCCGCATGCTTAGAAGCCTTTGGACCTCTTGCGCAATaGGGAAACCCCAGGGTAACTGTGGGCAGTTGGCTGAGTAGAACC | + |
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Preference number: 5 (lower is better) Translates to: TSSPACLEAFGPLAQ*GNPRVTVGSWLSRT Trigger: GGTTCTACTCAGCCAACTGCCCACAGTTACCCTGGGGTTTCCTCATTGCGCAAGAGGTCCAAAGGCTTCTAAGCATGCGGGAGAAGAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000257836.4 |
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| CDS CCA 90 bp | TTGTGTGCCCAGGATATGGTGGTGGTGGTGAAACACTGTGTTTTCTaGTCAGCGCCACTGCCTGTTCATAAGAAGGTAATCCTGCATCCT | + |
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Preference number: 5 (lower is better) Translates to: LCAQDMVVVVKHCVF*SAPLPVHKKVILHP Trigger: AGGATGCAGGATTACCTTCTTATGAACAGGCAGTGGCGCTGACCAGAAAACACAGTGTTTCACCACCACCACCATATCCTGGGCACACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000257836.4 |
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| CDS-3UTR CAA 90 bp | ATCAAGTTCAGGTCCAAGATGCAGACAGAACTTCTGTGGTACAGTACATGGACTAGGTGGGAGGATTGCTaGAGCCCCGAAGTTCAGGCT | + |
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Preference number: 5 (lower is better) Translates to: IKFRSKMQTELLWYSTWTRWEDC*SPEVQA Trigger: AGCCTGAACTTCGGGGCTCAAGCAATCCTCCCACCT...AGTCCATGTACTGTACCACAGAAGTTCTGTCTGCATCTTGGACCTGAACTTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000257836.4 |
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| CDS-3UTR CAA 90 bp | ATCAAGTTCAGGTCCAAGATGCAGACAGAACTTCTGTGGTACAGTACATGGACTAGGCAGGAGAAATCCTaGAACCTGGGAGGCGGAGGT | + |
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Preference number: 5 (lower is better) Translates to: IKFRSKMQTELLWYSTWTRQEKS*NLGGGG Trigger: ACCTCCGCCTCCCAGGTTCAAGGATTTCTCCTGCCT...AGTCCATGTACTGTACCACAGAAGTTCTGTCTGCATCTTGGACCTGAACTTGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000257836.4 |
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| CDS-3UTR CAA 90 bp | ATTCAAGTTAGAGCAACTGCTTTACACAAAATGATAGCAGTAGACAAATCTAGGGGCCAGAGGCTCTTCTaGGGGCGGTTCCTTCGGCCG | + |
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Preference number: 5 (lower is better) Translates to: IQVRATALHKMIAVDKSRGQRLF*GRFLRP Trigger: CGGCCGAAGGAACCGCCCCAAGAAGAGCCTCTGGCC...CCTAGATTTGTCTACTGCTATCATTTTGTGTAAAGCAGTTGCTCTAACTTGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000257836.4 |
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| CDS-3UTR CAA 90 bp | ATCAAGTTCAGGTCCAAGATGCAGACAGAACTTCTGTGGTACAGTACATGGACTAAGCCTTTGGACCTCTaGCGCAATGAGGAAACCCCA | + |
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Preference number: 5 (lower is better) Translates to: IKFRSKMQTELLWYSTWTKPLDL*RNEETP Trigger: TGGGGTTTCCTCATTGCGCAAGAGGTCCAAAGGCTT...AGTCCATGTACTGTACCACAGAAGTTCTGTCTGCATCTTGGACCTGAACTTGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000257836.4 |
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| CDS TCA 90 bp | AAATACCCTAAATCCTTTTGTGTGCCCAGGATATGGTGGTGGTGGTaGAACACTGTGTTTTCTGGTCAGCGCCACTGCCTGTTCATAAGA | + |
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Preference number: 5 (lower is better) Translates to: KYPKSFCVPRIWWWW*NTVFSGQRHCLFIR Trigger: TCTTATGAACAGGCAGTGGCGCTGACCAGAAAACACAGTGTTTCACCACCACCACCATATCCTGGGCACACAAAAGGATTTAGGGTATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000257836.4 |
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| CDS-3UTR CAA 90 bp | TATAGAGTCAAAAAGTCTCTTATCAAGCTGATAATGATCAAGTTCAGGTCCAAGCACTCTCTTTCTAGGTaGCCGGGAGTGAAGAGCTCC | + |
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Preference number: 5 (lower is better) Translates to: YRVKKSLIKLIMIKFRSKHSLSR*PGVKSS Trigger: GGAGCTCTTCACTCCCGGCAACCTAGAAAGAGAGTG...CTTGGACCTGAACTTGATCATTATCAGCTTGATAAGAGACTTTTTGACTCTATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000257836.4 |
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| CDS-3UTR CAA 90 bp | ATCAAGTTCAGGTCCAAGATGCAGACAGAACTTCTGTGGTACAGTACATGGACTCCCACCCAGATAAATTaGTGTGCATATACTCCAGAA | + |
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Preference number: 5 (lower is better) Translates to: IKFRSKMQTELLWYSTWTPTQIN*CAYTPE Trigger: TTCTGGAGTATATGCACACAAATTTATCTGGGTGGG...AGTCCATGTACTGTACCACAGAAGTTCTGTCTGCATCTTGGACCTGAACTTGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000257836.4 |
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| CDS-3UTR CAA 90 bp | ATCAAGTTCAGGTCCAAGATGCAGACAGAACTTCTGTGGTACAGTACATGGACTATCAAACATGTGGGTTaGCAGTCTCACTCCTGTAAA | + |
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Preference number: 5 (lower is better) Translates to: IKFRSKMQTELLWYSTWTIKHVG*QSHSCK Trigger: TTTACAGGAGTGAGACTGCAAACCCACATGTTTGAT...AGTCCATGTACTGTACCACAGAAGTTCTGTCTGCATCTTGGACCTGAACTTGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000257836.4 |
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| CDS TCA 90 bp | AATTGCAAAGTTCTTCATTGCACTCTCTTTCTAGGTTGCCGGGAGTaGAGAGCTCCAGATCAAATCTATTATACAGAAGGCGTCTATGTA | + |
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Preference number: 5 (lower is better) Translates to: NCKVLHCTLFLGCRE*RAPDQIYYTEGVYV Trigger: TACATAGACGCCTTCTGTATAATAGATTTGATCTGGAGCTCTTCACTCCCGGCAACCTAGAAAGAGAGTGCAATGAAGAACTTTGCAATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000257836.4 |
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| CDS-3UTR CAA 90 bp | ATCAAGTTCAGGTCCAAGATGCAGACAGAACTTCTGTGGTACAGTACATGGACTGTGACTGATACAATGTaGAGATACTTTCCCTTCAAT | + |
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Preference number: 5 (lower is better) Translates to: IKFRSKMQTELLWYSTWTVTDTM*RYFPFN Trigger: ATTGAAGGGAAAGTATCTCAACATTGTATCAGTCAC...AGTCCATGTACTGTACCACAGAAGTTCTGTCTGCATCTTGGACCTGAACTTGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000257836.4 |
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| CDS-3UTR CAA 90 bp | ATTCAAGTTAGAGCAACTGCTTTACACAAAATGATAGCAGTAGACAAATCTAGGTTGCAAAGTTCTTCATaGCACTCTCTTTCTAGGTTG | + |
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Preference number: 5 (lower is better) Translates to: IQVRATALHKMIAVDKSRLQSSS*HSLSRL Trigger: CAACCTAGAAAGAGAGTGCAATGAAGAACTTTGCAA...CCTAGATTTGTCTACTGCTATCATTTTGTGTAAAGCAGTTGCTCTAACTTGAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000257836.4 |
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| CDS-3UTR CAA 90 bp | TATAGAGTCAAAAAGTCTCTTATCAAGCTGATAATGATCAAGTTCAGGTCCAAGTCTATTTTCTCTCTGTaGCCATCTGATTTTGTGGTT | + |
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Preference number: 5 (lower is better) Translates to: YRVKKSLIKLIMIKFRSKSIFSL*PSDFVV Trigger: AACCACAAAATCAGATGGCAACAGAGAGAAAATAGA...CTTGGACCTGAACTTGATCATTATCAGCTTGATAAGAGACTTTTTGACTCTATA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000257836.4 |
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| CDS CCA 72 bp | GCGACGCTCCGGGCCTCGCTCTCCGCAGGGTCTGGATaGCCCCCGCGCGCAAACCTGGGAAGGGCCTGGGGT | + |
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Preference number: 6 (lower is better) Translates to: ATLRASLSAGSG*PPRANLGRAWG Trigger: ACCCCAGGCCCTTCCCAGGTTTGCGCGCGGGGGCCATCCAGACCCTGCGGAGAGCGAGGCCCGGAGCGTCGC 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000257836.4 |
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| CDS TCA 72 bp | CCCGCATGCTTAGAAGCCTTTGGACCTCTTGCGCAATaGGGAAACCCCAGGGTAACTGTGGGCAGTTGGCTG | + |
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Preference number: 6 (lower is better) Translates to: PACLEAFGPLAQ*GNPRVTVGSWL Trigger: CAGCCAACTGCCCACAGTTACCCTGGGGTTTCCTCATTGCGCAAGAGGTCCAAAGGCTTCTAAGCATGCGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000257836.4 |
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| CDS CCA 72 bp | TGTAAACACTTCTTCTCCCGCATGCTTAGAAGCCTTTaGACCTCTTGCGCAATGAGGAAACCCCAGGGTAAC | + |
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Preference number: 6 (lower is better) Translates to: CKHFFSRMLRSL*TSCAMRKPQGN Trigger: GTTACCCTGGGGTTTCCTCATTGCGCAAGAGGTCCAAAGGCTTCTAAGCATGCGGGAGAAGAAGTGTTTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000257836.4 |
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| CDS CCA 72 bp | CAGGATATGGTGGTGGTGGTGAAACACTGTGTTTTCTaGTCAGCGCCACTGCCTGTTCATAAGAAGGTAATC | + |
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Preference number: 6 (lower is better) Translates to: QDMVVVVKHCVF*SAPLPVHKKVI Trigger: GATTACCTTCTTATGAACAGGCAGTGGCGCTGACCAGAAAACACAGTGTTTCACCACCACCACCATATCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000257836.4 |
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