RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PRR27 (Homo sapiens)

Ensembl gene IDs: ENSG00000187533

Ensembl transcript IDs: ENST00000344526.10, ENST00000502294.5, ENST00000502441.2, ENST00000509633.1, ENST00000512173.1, ENST00000634325.2, ENST00000634530.1, ENST00000634546.1, ENST00000634747.1, ENST00000635689.1

Found 251 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GATACGAAGGTAACCCTGTGTCAGTGTAAGTATTCCCAGGGTAACTaGGGACTGTATTCACTGGGCGATAATAAAGAGGAGGTGGTAAAT +
Preference number: 1 (lower is better)
Translates to: DTKVTLCQCKYSQGN*GLYSLGDNKEEVVN
Trigger: ATTTACCACCTCCTCTTTATTATCGCCCAGTGAATACAGTCCCCAGTTACCCTGGGAATACTTACACTGACACAGGGTTACCTTCGTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509633.1
ENST00000635689.1
3UTR GCA 90 bp CTGTATTCACTGGGCGATAATAAAGAGGAGGTGGTAAATTCCGTATaGCATAAGGAATATTCAGAGATGGATGAAGTGGGTGACCATCGT +
Preference number: 1 (lower is better)
Translates to: LYSLGDNKEEVVNSV*HKEYSEMDEVGDHR
Trigger: ACGATGGTCACCCACTTCATCCATCTCTGAATATTCCTTATGGCATACGGAATTTACCACCTCCTCTTTATTATCGCCCAGTGAATACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509633.1
ENST00000635689.1
3UTR CCA 90 bp AAAGAAATAGAAGAAAGGATGTATAGTGGGCCATCTGGCAATCACTaGAGAAGTATAGTGGTTGTTGCAGTTGATACCAGTGTGAAGGTG +
Preference number: 1 (lower is better)
Translates to: KEIEERMYSGPSGNH*RSIVVVAVDTSVKV
Trigger: CACCTTCACACTGGTATCAACTGCAACAACCACTATACTTCTCCAGTGATTGCCAGATGGCCCACTATACATCCTTTCTTCTATTTCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
3UTR-3UTR CCA 90 bp GGCAATCACTGGAGAAGTATAGTGGTTGTTGCAGTTGATACCAGTGTGAAGGTGAGAAGGGTGAGGTTCTaGGGCAGCAGGCTTGGCTGT +
Preference number: 2 (lower is better)
Translates to: GNHWRSIVVVAVDTSVKVRRVRF*GSRLGC
Trigger: ACAGCCAAGCCTGCTGCCCCAGAACCTCACCCTTCT...CACCTTCACACTGGTATCAACTGCAACAACCACTATACTTCTCCAGTGATTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509633.1
ENST00000635689.1
3UTR-3UTR TCA 90 bp GGCAATCACTGGAGAAGTATAGTGGTTGTTGCAGTTGATACCAGTGTGAAGGTGGAGGCGGACAGATCATaGGGTCAGGAGATCAAGACC +
Preference number: 2 (lower is better)
Translates to: GNHWRSIVVVAVDTSVKVEADRS*GQEIKT
Trigger: GGTCTTGATCTCCTGACCTCATGATCTGTCCGCCTC...CACCTTCACACTGGTATCAACTGCAACAACCACTATACTTCTCCAGTGATTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
3UTR-3UTR GCA 90 bp ATGTGTGTATGTGATCAGGGTGGAGGAAAAGTGGAAGCAGGTAGACTGGTTAATCCGGGAGGTGGAAGTTaGAGTGAGCTGAGTTGGCAC +
Preference number: 2 (lower is better)
Translates to: MCVCDQGGGKVEAGRLVNPGGGS*SELSWH
Trigger: GTGCCAACTCAGCTCACTGCAACTTCCACCTCCCGG...ATTAACCAGTCTACCTGCTTCCACTTTTCCTCCACCCTGATCACATACACACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344526.10
ENST00000502294.5
ENST00000509633.1
ENST00000634325.2
ENST00000634530.1
ENST00000635689.1
3UTR-3UTR GCA 90 bp CATGAGGAGCATGGGGCAAGATGGAGAATGATAGGGAATGAAGTTAGAAAAGTCCCGGGAGGTGGAAGTTaGAGTGAGCTGAGTTGGCAC +
Preference number: 2 (lower is better)
Translates to: HEEHGARWRMIGNEVRKVPGGGS*SELSWH
Trigger: GTGCCAACTCAGCTCACTGCAACTTCCACCTCCCGG...GACTTTTCTAACTTCATTCCCTATCATTCTCCATCTTGCCCCATGCTCCTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344526.10
ENST00000502294.5
ENST00000509633.1
ENST00000634325.2
ENST00000634530.1
ENST00000635689.1
3UTR-3UTR GCA 90 bp TCTGGCAATCACTGGAGAAGTATAGTGGTTGTTGCAGTTGATACCAGTGTGAAGTGTGGCTGTAAGAGGTaGAGCTGCAGCAGGCTCAGC +
Preference number: 2 (lower is better)
Translates to: SGNHWRSIVVVAVDTSVKCGCKR*SCSRLS
Trigger: GCTGAGCCTGCTGCAGCTGCACCTCTTACAGCCACA...CTTCACACTGGTATCAACTGCAACAACCACTATACTTCTCCAGTGATTGCCAGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509633.1
ENST00000635689.1
3UTR-3UTR CCA 90 bp ATGTGTGTATGTGATCAGGGTGGAGGAAAAGTGGAAGCAGGTAGACTGGTTAATGTATTCCCAGCACTTTaGGAGGCCGAGGCGGACAGA +
Preference number: 2 (lower is better)
Translates to: MCVCDQGGGKVEAGRLVNVFPAL*EAEADR
Trigger: TCTGTCCGCCTCGGCCTCCCAAAGTGCTGGGAATAC...ATTAACCAGTCTACCTGCTTCCACTTTTCCTCCACCCTGATCACATACACACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344526.10
ENST00000502294.5
ENST00000509633.1
ENST00000634325.2
ENST00000634530.1
ENST00000635689.1
3UTR-3UTR CCA 90 bp TCTGGCAATCACTGGAGAAGTATAGTGGTTGTTGCAGTTGATACCAGTGTGAAGGTATTCCCAGCACTTTaGGAGGCCGAGGCGGACAGA +
Preference number: 2 (lower is better)
Translates to: SGNHWRSIVVVAVDTSVKVFPAL*EAEADR
Trigger: TCTGTCCGCCTCGGCCTCCCAAAGTGCTGGGAATAC...CTTCACACTGGTATCAACTGCAACAACCACTATACTTCTCCAGTGATTGCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
3UTR-3UTR CCA 90 bp CATGAGGAGCATGGGGCAAGATGGAGAATGATAGGGAATGAAGTTAGAAAAGTCAGAAGGGTGAGGTTCTaGGGCAGCAGGCTTGGCTGT +
Preference number: 2 (lower is better)
Translates to: HEEHGARWRMIGNEVRKVRRVRF*GSRLGC
Trigger: ACAGCCAAGCCTGCTGCCCCAGAACCTCACCCTTCT...GACTTTTCTAACTTCATTCCCTATCATTCTCCATCTTGCCCCATGCTCCTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000509633.1
ENST00000635689.1
3UTR-3UTR TCA 90 bp TCTGGCAATCACTGGAGAAGTATAGTGGTTGTTGCAGTTGATACCAGTGTGAAGGGCAGGAGAATCACTTaGACCCGGGAGGTGGAAGTT +
Preference number: 2 (lower is better)
Translates to: SGNHWRSIVVVAVDTSVKGRRIT*TREVEV
Trigger: AACTTCCACCTCCCGGGTTCAAGTGATTCTCCTGCC...CTTCACACTGGTATCAACTGCAACAACCACTATACTTCTCCAGTGATTGCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
3UTR-3UTR TCA 90 bp ATGTGTGTATGTGATCAGGGTGGAGGAAAAGTGGAAGCAGGTAGACTGGTTAATGGCAGGAGAATCACTTaGACCCGGGAGGTGGAAGTT +
Preference number: 2 (lower is better)
Translates to: MCVCDQGGGKVEAGRLVNGRRIT*TREVEV
Trigger: AACTTCCACCTCCCGGGTTCAAGTGATTCTCCTGCC...ATTAACCAGTCTACCTGCTTCCACTTTTCCTCCACCCTGATCACATACACACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344526.10
ENST00000502294.5
ENST00000509633.1
ENST00000634325.2
ENST00000634530.1
ENST00000635689.1
3UTR-3UTR TCA 90 bp CATGAGGAGCATGGGGCAAGATGGAGAATGATAGGGAATGAAGTTAGAAAAGTCGGCAGGAGAATCACTTaGACCCGGGAGGTGGAAGTT +
Preference number: 2 (lower is better)
Translates to: HEEHGARWRMIGNEVRKVGRRIT*TREVEV
Trigger: AACTTCCACCTCCCGGGTTCAAGTGATTCTCCTGCC...GACTTTTCTAACTTCATTCCCTATCATTCTCCATCTTGCCCCATGCTCCTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344526.10
ENST00000502294.5
ENST00000509633.1
ENST00000634325.2
ENST00000634530.1
ENST00000635689.1
3UTR-3UTR TCA 90 bp CATGAGGAGCATGGGGCAAGATGGAGAATGATAGGGAATGAAGTTAGAAAAGTCGAGGCGGACAGATCATaGGGTCAGGAGATCAAGACC +
Preference number: 2 (lower is better)
Translates to: HEEHGARWRMIGNEVRKVEADRS*GQEIKT
Trigger: GGTCTTGATCTCCTGACCTCATGATCTGTCCGCCTC...GACTTTTCTAACTTCATTCCCTATCATTCTCCATCTTGCCCCATGCTCCTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344526.10
ENST00000502294.5
ENST00000509633.1
ENST00000634325.2
ENST00000634530.1
ENST00000635689.1
3UTR-3UTR TCA 90 bp ATGTGTGTATGTGATCAGGGTGGAGGAAAAGTGGAAGCAGGTAGACTGGTTAATGAGGCGGACAGATCATaGGGTCAGGAGATCAAGACC +
Preference number: 2 (lower is better)
Translates to: MCVCDQGGGKVEAGRLVNEADRS*GQEIKT
Trigger: GGTCTTGATCTCCTGACCTCATGATCTGTCCGCCTC...ATTAACCAGTCTACCTGCTTCCACTTTTCCTCCACCCTGATCACATACACACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344526.10
ENST00000502294.5
ENST00000509633.1
ENST00000634325.2
ENST00000634530.1
ENST00000635689.1
3UTR-3UTR TCA 90 bp ATCCAGGAGAAGTTAGAATCCAGGGATACGAAGGTAACCCTGTGTCAGTGTAAGTGTCATCCTCACCAATaGAGGGGAACCGTCTCTCCA +
Preference number: 2 (lower is better)
Translates to: IQEKLESRDTKVTLCQCKCHPHQ*RGTVSP
Trigger: TGGAGAGACGGTTCCCCTTCATTGGTGAGGATGACA...CTTACACTGACACAGGGTTACCTTCGTATCCCTGGATTCTAACTTCTCCTGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509633.1
ENST00000635689.1
3UTR-3UTR TCA 90 bp CATGAGGAGCATGGGGCAAGATGGAGAATGATAGGGAATGAAGTTAGAAAAGTCAGGTGGAAGTTGCAGTaGGCTGAGTTGGCACCATTG +
Preference number: 2 (lower is better)
Translates to: HEEHGARWRMIGNEVRKVRWKLQ*AELAPL
Trigger: CAATGGTGCCAACTCAGCTCACTGCAACTTCCACCT...GACTTTTCTAACTTCATTCCCTATCATTCTCCATCTTGCCCCATGCTCCTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344526.10
ENST00000502294.5
ENST00000509633.1
ENST00000634325.2
ENST00000634530.1
ENST00000635689.1
3UTR-3UTR GCA 90 bp ACTTTTCTGTGTCTCAAAGCTGATGCCTGTTTACTAACAACAGTTTGTTTTCCATGCAGCAGGCTCAGCTaGAATAGGTGGGGCAGCGGG +
Preference number: 2 (lower is better)
Translates to: TFLCLKADACLLTTVCFPCSRLS*NRWGSG
Trigger: CCCGCTGCCCCACCTATTGCAGCTGAGCCTGCTGCA...TGGAAAACAAACTGTTGTTAGTAAACAGGCATCAGCTTTGAGACACAGAAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000509633.1
ENST00000635689.1
3UTR-3UTR TCA 90 bp ATGTGTGTATGTGATCAGGGTGGAGGAAAAGTGGAAGCAGGTAGACTGGTTAATGACTCCAGGCTAGGCTaGATGATTGCCATTTCAGTC +
Preference number: 2 (lower is better)
Translates to: MCVCDQGGGKVEAGRLVNDSRLG*MIAISV
Trigger: GACTGAAATGGCAATCATTCAGCCTAGCCTGGAGTC...ATTAACCAGTCTACCTGCTTCCACTTTTCCTCCACCCTGATCACATACACACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344526.10
ENST00000502294.5
ENST00000509633.1
ENST00000634325.2
ENST00000634530.1
ENST00000635689.1
3UTR-3UTR TCA 90 bp CATGAGGAGCATGGGGCAAGATGGAGAATGATAGGGAATGAAGTTAGAAAAGTCGACTCCAGGCTAGGCTaGATGATTGCCATTTCAGTC +
Preference number: 2 (lower is better)
Translates to: HEEHGARWRMIGNEVRKVDSRLG*MIAISV
Trigger: GACTGAAATGGCAATCATTCAGCCTAGCCTGGAGTC...GACTTTTCTAACTTCATTCCCTATCATTCTCCATCTTGCCCCATGCTCCTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344526.10
ENST00000502294.5
ENST00000509633.1
ENST00000634325.2
ENST00000634530.1
ENST00000635689.1
3UTR-3UTR TCA 90 bp ATGTGTGTATGTGATCAGGGTGGAGGAAAAGTGGAAGCAGGTAGACTGGTTAATGAAGTTGCAGTGAGCTaGGTTGGCACCATTGCACTA +
Preference number: 2 (lower is better)
Translates to: MCVCDQGGGKVEAGRLVNEVAVS*VGTIAL
Trigger: TAGTGCAATGGTGCCAACTCAGCTCACTGCAACTTC...ATTAACCAGTCTACCTGCTTCCACTTTTCCTCCACCCTGATCACATACACACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344526.10
ENST00000502294.5
ENST00000509633.1
ENST00000634325.2
ENST00000634530.1
ENST00000635689.1
3UTR-3UTR GCA 90 bp ATTTTCCAGTGGCTAAAGGGAACGCTATACAGTAAAGAATTATGTAAGATGGATTGCAGCAGGCTCAGCTaGAATAGGTGGGGCAGCGGG +
Preference number: 2 (lower is better)
Translates to: IFQWLKGTLYSKELCKMDCSRLS*NRWGSG
Trigger: CCCGCTGCCCCACCTATTGCAGCTGAGCCTGCTGCA...ATCCATCTTACATAATTCTTTACTGTATAGCGTTCCCTTTAGCCACTGGAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000509633.1
ENST00000635689.1
3UTR-3UTR CCA 90 bp GGCAATCACTGGAGAAGTATAGTGGTTGTTGCAGTTGATACCAGTGTGAAGGTGAGGGTGGAGGAAAAGTaGAAGCAGGTAGACTGGTTA +
Preference number: 2 (lower is better)
Translates to: GNHWRSIVVVAVDTSVKVRVEEK*KQVDWL
Trigger: TAACCAGTCTACCTGCTTCCACTTTTCCTCCACCCT...CACCTTCACACTGGTATCAACTGCAACAACCACTATACTTCTCCAGTGATTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
3UTR-3UTR CCA 90 bp ATCCAGGAGAAGTTAGAATCCAGGGATACGAAGGTAACCCTGTGTCAGTGTAAGGGGGACTGTATTCACTaGGCGATAATAAAGAGGAGG +
Preference number: 2 (lower is better)
Translates to: IQEKLESRDTKVTLCQCKGDCIH*AIIKRR
Trigger: CCTCCTCTTTATTATCGCCCAGTGAATACAGTCCCC...CTTACACTGACACAGGGTTACCTTCGTATCCCTGGATTCTAACTTCTCCTGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000509633.1
ENST00000635689.1
3UTR-3UTR CCA 90 bp TCTGGCAATCACTGGAGAAGTATAGTGGTTGTTGCAGTTGATACCAGTGTGAAGTATTCCCAGGGTAACTaGGGACTGTATTCACTGGGC +
Preference number: 2 (lower is better)
Translates to: SGNHWRSIVVVAVDTSVKYSQGN*GLYSLG
Trigger: GCCCAGTGAATACAGTCCCCAGTTACCCTGGGAATA...CTTCACACTGGTATCAACTGCAACAACCACTATACTTCTCCAGTGATTGCCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509633.1
ENST00000635689.1
3UTR-3UTR CCA 90 bp ACTTTTCTGTGTCTCAAAGCTGATGCCTGTTTACTAACAACAGTTTGTTTTCCAGTATTCCCAGCACTTTaGGAGGCCGAGGCGGACAGA +
Preference number: 2 (lower is better)
Translates to: TFLCLKADACLLTTVCFPVFPAL*EAEADR
Trigger: TCTGTCCGCCTCGGCCTCCCAAAGTGCTGGGAATAC...TGGAAAACAAACTGTTGTTAGTAAACAGGCATCAGCTTTGAGACACAGAAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
3UTR-3UTR CCA 90 bp CATGAGGAGCATGGGGCAAGATGGAGAATGATAGGGAATGAAGTTAGAAAAGTCAGGGTGGAGGAAAAGTaGAAGCAGGTAGACTGGTTA +
Preference number: 2 (lower is better)
Translates to: HEEHGARWRMIGNEVRKVRVEEK*KQVDWL
Trigger: TAACCAGTCTACCTGCTTCCACTTTTCCTCCACCCT...GACTTTTCTAACTTCATTCCCTATCATTCTCCATCTTGCCCCATGCTCCTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000344526.10
ENST00000502294.5
ENST00000509633.1
ENST00000634325.2
ENST00000634530.1
ENST00000635689.1
3UTR-3UTR TCA 90 bp ACTTTTCTGTGTCTCAAAGCTGATGCCTGTTTACTAACAACAGTTTGTTTTCCAGGCAGGAGAATCACTTaGACCCGGGAGGTGGAAGTT +
Preference number: 2 (lower is better)
Translates to: TFLCLKADACLLTTVCFPGRRIT*TREVEV
Trigger: AACTTCCACCTCCCGGGTTCAAGTGATTCTCCTGCC...TGGAAAACAAACTGTTGTTAGTAAACAGGCATCAGCTTTGAGACACAGAAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
3UTR-3UTR TCA 90 bp ACTTTTCTGTGTCTCAAAGCTGATGCCTGTTTACTAACAACAGTTTGTTTTCCAGAGGCGGACAGATCATaGGGTCAGGAGATCAAGACC +
Preference number: 2 (lower is better)
Translates to: TFLCLKADACLLTTVCFPEADRS*GQEIKT
Trigger: GGTCTTGATCTCCTGACCTCATGATCTGTCCGCCTC...TGGAAAACAAACTGTTGTTAGTAAACAGGCATCAGCTTTGAGACACAGAAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
3UTR-3UTR TCA 90 bp TCTGGCAATCACTGGAGAAGTATAGTGGTTGTTGCAGTTGATACCAGTGTGAAGGCCCTGATAAAGTGCTaGATAAGACACAGAAATGCC +
Preference number: 2 (lower is better)
Translates to: SGNHWRSIVVVAVDTSVKALIKC*IRHRNA
Trigger: GGCATTTCTGTGTCTTATTCAGCACTTTATCAGGGC...CTTCACACTGGTATCAACTGCAACAACCACTATACTTCTCCAGTGATTGCCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
3UTR-3UTR TCA 90 bp GGCAATCACTGGAGAAGTATAGTGGTTGTTGCAGTTGATACCAGTGTGAAGGTGATATTCACTGGTCACTaGATATGTCCCAGGCATTGT +
Preference number: 2 (lower is better)
Translates to: GNHWRSIVVVAVDTSVKVIFTGH*ICPRHC
Trigger: ACAATGCCTGGGACATATTCAGTGACCAGTGAATAT...CACCTTCACACTGGTATCAACTGCAACAACCACTATACTTCTCCAGTGATTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
3UTR-3UTR TCA 90 bp GGCAATCACTGGAGAAGTATAGTGGTTGTTGCAGTTGATACCAGTGTGAAGGTGTCTGTGTCTCAAAGCTaGTGCCTGTTTACTAACAAC +
Preference number: 2 (lower is better)
Translates to: GNHWRSIVVVAVDTSVKVSVSQS*CLFTNN
Trigger: GTTGTTAGTAAACAGGCATCAGCTTTGAGACACAGA...CACCTTCACACTGGTATCAACTGCAACAACCACTATACTTCTCCAGTGATTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
3UTR-3UTR TCA 90 bp ATGTGTGTATGTGATCAGGGTGGAGGAAAAGTGGAAGCAGGTAGACTGGTTAATGGAGGAACATTCAACTaGGTAGCTAAGGGAAAACCA +
Preference number: 2 (lower is better)
Translates to: MCVCDQGGGKVEAGRLVNGGTFN*VAKGKP
Trigger: TGGTTTTCCCTTAGCTACTCAGTTGAATGTTCCTCC...ATTAACCAGTCTACCTGCTTCCACTTTTCCTCCACCCTGATCACATACACACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000509633.1
ENST00000635689.1
3UTR-3UTR GCA 90 bp ATTTTCCAGTGGCTAAAGGGAACGCTATACAGTAAAGAATTATGTAAGATGGATCCGGGAGGTGGAAGTTaGAGTGAGCTGAGTTGGCAC +
Preference number: 2 (lower is better)
Translates to: IFQWLKGTLYSKELCKMDPGGGS*SELSWH
Trigger: GTGCCAACTCAGCTCACTGCAACTTCCACCTCCCGG...ATCCATCTTACATAATTCTTTACTGTATAGCGTTCCCTTTAGCCACTGGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
3UTR-3UTR GCA 90 bp ATTTTCCAGTGGCTAAAGGGAACGCTATACAGTAAAGAATTATGTAAGATGGATTGTGGCTGTAAGAGGTaGAGCTGCAGCAGGCTCAGC +
Preference number: 2 (lower is better)
Translates to: IFQWLKGTLYSKELCKMDCGCKR*SCSRLS
Trigger: GCTGAGCCTGCTGCAGCTGCACCTCTTACAGCCACA...ATCCATCTTACATAATTCTTTACTGTATAGCGTTCCCTTTAGCCACTGGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509633.1
ENST00000635689.1
3UTR-3UTR CCA 90 bp ATTTTCCAGTGGCTAAAGGGAACGCTATACAGTAAAGAATTATGTAAGATGGATGTATTCCCAGCACTTTaGGAGGCCGAGGCGGACAGA +
Preference number: 2 (lower is better)
Translates to: IFQWLKGTLYSKELCKMDVFPAL*EAEADR
Trigger: TCTGTCCGCCTCGGCCTCCCAAAGTGCTGGGAATAC...ATCCATCTTACATAATTCTTTACTGTATAGCGTTCCCTTTAGCCACTGGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
3UTR-3UTR CCA 90 bp GGTAAGTCTTGTGTCCTTGGAGAGGTGTTTAGAATATATTCCATTTTAAAAGAGGTATTCCCAGCACTTTaGGAGGCCGAGGCGGACAGA +
Preference number: 2 (lower is better)
Translates to: GKSCVLGEVFRIYSILKEVFPAL*EAEADR
Trigger: TCTGTCCGCCTCGGCCTCCCAAAGTGCTGGGAATAC...CTCTTTTAAAATGGAATATATTCTAAACACCTCTCCAAGGACACAAGACTTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344526.10
ENST00000502294.5
ENST00000509633.1
ENST00000634325.2
ENST00000634530.1
ENST00000635689.1
3UTR-3UTR CCA 90 bp ATCCAGGAGAAGTTAGAATCCAGGGATACGAAGGTAACCCTGTGTCAGTGTAAGAGGAATATTCAGAGATaGATGAAGTGGGTGACCATC +
Preference number: 2 (lower is better)
Translates to: IQEKLESRDTKVTLCQCKRNIQR*MKWVTI
Trigger: GATGGTCACCCACTTCATCCATCTCTGAATATTCCT...CTTACACTGACACAGGGTTACCTTCGTATCCCTGGATTCTAACTTCTCCTGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509633.1
ENST00000635689.1
3UTR-3UTR TCA 90 bp ACTTTTCTGTGTCTCAAAGCTGATGCCTGTTTACTAACAACAGTTTGTTTTCCAAGGTGGAAGTTGCAGTaGGCTGAGTTGGCACCATTG +
Preference number: 2 (lower is better)
Translates to: TFLCLKADACLLTTVCFPRWKLQ*AELAPL
Trigger: CAATGGTGCCAACTCAGCTCACTGCAACTTCCACCT...TGGAAAACAAACTGTTGTTAGTAAACAGGCATCAGCTTTGAGACACAGAAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
3UTR-3UTR TCA 90 bp GGCAATCACTGGAGAAGTATAGTGGTTGTTGCAGTTGATACCAGTGTGAAGGTGTTTGTGGAGATAAGATaGGGGCAACAACAAAGACAA +
Preference number: 2 (lower is better)
Translates to: GNHWRSIVVVAVDTSVKVFVEIR*GQQQRQ
Trigger: TTGTCTTTGTTGTTGCCCTCATCTTATCTCCACAAA...CACCTTCACACTGGTATCAACTGCAACAACCACTATACTTCTCCAGTGATTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
3UTR-3UTR TCA 90 bp TCTGGCAATCACTGGAGAAGTATAGTGGTTGTTGCAGTTGATACCAGTGTGAAGTCTGTGTCTCAAAGCTaGTGCCTGTTTACTAACAAC +
Preference number: 2 (lower is better)
Translates to: SGNHWRSIVVVAVDTSVKSVSQS*CLFTNN
Trigger: GTTGTTAGTAAACAGGCATCAGCTTTGAGACACAGA...CTTCACACTGGTATCAACTGCAACAACCACTATACTTCTCCAGTGATTGCCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
3UTR-3UTR TCA 90 bp ACTTTTCTGTGTCTCAAAGCTGATGCCTGTTTACTAACAACAGTTTGTTTTCCATGTCATCCTCACCAATaGAGGGGAACCGTCTCTCCA +
Preference number: 2 (lower is better)
Translates to: TFLCLKADACLLTTVCFPCHPHQ*RGTVSP
Trigger: TGGAGAGACGGTTCCCCTTCATTGGTGAGGATGACA...TGGAAAACAAACTGTTGTTAGTAAACAGGCATCAGCTTTGAGACACAGAAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000509633.1
ENST00000635689.1
3UTR-3UTR CCA 90 bp ACTTTTCTGTGTCTCAAAGCTGATGCCTGTTTACTAACAACAGTTTGTTTTCCAGTTAATAGGCTATTCTaGCAGGGCACGGTGGCTCAC +
Preference number: 2 (lower is better)
Translates to: TFLCLKADACLLTTVCFPVNRLF*QGTVAH
Trigger: GTGAGCCACCGTGCCCTGCCAGAATAGCCTATTAAC...TGGAAAACAAACTGTTGTTAGTAAACAGGCATCAGCTTTGAGACACAGAAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
3UTR-3UTR CCA 90 bp GGCAATCACTGGAGAAGTATAGTGGTTGTTGCAGTTGATACCAGTGTGAAGGTGCTTGGCTCTAGAAGATaGAAGCAAACATCTCAAGTT +
Preference number: 2 (lower is better)
Translates to: GNHWRSIVVVAVDTSVKVLGSRR*KQTSQV
Trigger: AACTTGAGATGTTTGCTTCCATCTTCTAGAGCCAAG...CACCTTCACACTGGTATCAACTGCAACAACCACTATACTTCTCCAGTGATTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
3UTR-3UTR TCA 90 bp GGTAAGTCTTGTGTCCTTGGAGAGGTGTTTAGAATATATTCCATTTTAAAAGAGAGGTGGAAGTTGCAGTaGGCTGAGTTGGCACCATTG +
Preference number: 2 (lower is better)
Translates to: GKSCVLGEVFRIYSILKERWKLQ*AELAPL
Trigger: CAATGGTGCCAACTCAGCTCACTGCAACTTCCACCT...CTCTTTTAAAATGGAATATATTCTAAACACCTCTCCAAGGACACAAGACTTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344526.10
ENST00000502294.5
ENST00000509633.1
ENST00000634325.2
ENST00000634530.1
ENST00000635689.1
3UTR-3UTR CCA 90 bp GGTAAGTCTTGTGTCCTTGGAGAGGTGTTTAGAATATATTCCATTTTAAAAGAGGTTAATAGGCTATTCTaGCAGGGCACGGTGGCTCAC +
Preference number: 2 (lower is better)
Translates to: GKSCVLGEVFRIYSILKEVNRLF*QGTVAH
Trigger: GTGAGCCACCGTGCCCTGCCAGAATAGCCTATTAAC...CTCTTTTAAAATGGAATATATTCTAAACACCTCTCCAAGGACACAAGACTTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344526.10
ENST00000502294.5
ENST00000509633.1
ENST00000634325.2
ENST00000634530.1
ENST00000635689.1
3UTR-3UTR CCA 90 bp TCTGGCAATCACTGGAGAAGTATAGTGGTTGTTGCAGTTGATACCAGTGTGAAGCTTGGCTCTAGAAGATaGAAGCAAACATCTCAAGTT +
Preference number: 2 (lower is better)
Translates to: SGNHWRSIVVVAVDTSVKLGSRR*KQTSQV
Trigger: AACTTGAGATGTTTGCTTCCATCTTCTAGAGCCAAG...CTTCACACTGGTATCAACTGCAACAACCACTATACTTCTCCAGTGATTGCCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
3UTR-3UTR TCA 90 bp GGTAAGTCTTGTGTCCTTGGAGAGGTGTTTAGAATATATTCCATTTTAAAAGAGGACTCCAGGCTAGGCTaGATGATTGCCATTTCAGTC +
Preference number: 2 (lower is better)
Translates to: GKSCVLGEVFRIYSILKEDSRLG*MIAISV
Trigger: GACTGAAATGGCAATCATTCAGCCTAGCCTGGAGTC...CTCTTTTAAAATGGAATATATTCTAAACACCTCTCCAAGGACACAAGACTTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344526.10
ENST00000502294.5
ENST00000509633.1
ENST00000634325.2
ENST00000634530.1
ENST00000635689.1
3UTR-3UTR TCA 90 bp ATTTTCCAGTGGCTAAAGGGAACGCTATACAGTAAAGAATTATGTAAGATGGATGAAGTTGCAGTGAGCTaGGTTGGCACCATTGCACTA +
Preference number: 2 (lower is better)
Translates to: IFQWLKGTLYSKELCKMDEVAVS*VGTIAL
Trigger: TAGTGCAATGGTGCCAACTCAGCTCACTGCAACTTC...ATCCATCTTACATAATTCTTTACTGTATAGCGTTCCCTTTAGCCACTGGAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
3UTR-3UTR CCA 90 bp ACTTTTCTGTGTCTCAAAGCTGATGCCTGTTTACTAACAACAGTTTGTTTTCCAAGGGTGGAGGAAAAGTaGAAGCAGGTAGACTGGTTA +
Preference number: 2 (lower is better)
Translates to: TFLCLKADACLLTTVCFPRVEEK*KQVDWL
Trigger: TAACCAGTCTACCTGCTTCCACTTTTCCTCCACCCT...TGGAAAACAAACTGTTGTTAGTAAACAGGCATCAGCTTTGAGACACAGAAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
3UTR-3UTR CCA 90 bp TCTGGCAATCACTGGAGAAGTATAGTGGTTGTTGCAGTTGATACCAGTGTGAAGGAGACCATGTCCTCATaGCTATACATAACAGTAATA +
Preference number: 2 (lower is better)
Translates to: SGNHWRSIVVVAVDTSVKETMSS*LYITVI
Trigger: TATTACTGTTATGTATAGCCATGAGGACATGGTCTC...CTTCACACTGGTATCAACTGCAACAACCACTATACTTCTCCAGTGATTGCCAGA
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
3UTR-3UTR CCA 90 bp GGCAATCACTGGAGAAGTATAGTGGTTGTTGCAGTTGATACCAGTGTGAAGGTGATTTCCAGATGGTGGTaGTTACATGTATGTTTTCTT +
Preference number: 2 (lower is better)
Translates to: GNHWRSIVVVAVDTSVKVISRWW*LHVCFL
Trigger: AAGAAAACATACATGTAACCACCACCATCTGGAAAT...CACCTTCACACTGGTATCAACTGCAACAACCACTATACTTCTCCAGTGATTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
3UTR-3UTR TCA 90 bp ATTTTCCAGTGGCTAAAGGGAACGCTATACAGTAAAGAATTATGTAAGATGGATAGTGGTTGTTGCAGTTaGTACCAGTGTGAAGGTGTG +
Preference number: 2 (lower is better)
Translates to: IFQWLKGTLYSKELCKMDSGCCS*YQCEGV
Trigger: CACACCTTCACACTGGTATCAACTGCAACAACCACT...ATCCATCTTACATAATTCTTTACTGTATAGCGTTCCCTTTAGCCACTGGAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
3UTR-3UTR TCA 90 bp ATTTTCCAGTGGCTAAAGGGAACGCTATACAGTAAAGAATTATGTAAGATGGATACCTCTTTGAGGTCCTaGCTTTCTGGCCACAAAAGA +
Preference number: 2 (lower is better)
Translates to: IFQWLKGTLYSKELCKMDTSLRS*LSGHKR
Trigger: TCTTTTGTGGCCAGAAAGTCAGGACCTCAAAGAGGT...ATCCATCTTACATAATTCTTTACTGTATAGCGTTCCCTTTAGCCACTGGAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
3UTR-3UTR TCA 90 bp ACTTTTCTGTGTCTCAAAGCTGATGCCTGTTTACTAACAACAGTTTGTTTTCCAGGAGGAACATTCAACTaGGTAGCTAAGGGAAAACCA +
Preference number: 2 (lower is better)
Translates to: TFLCLKADACLLTTVCFPGGTFN*VAKGKP
Trigger: TGGTTTTCCCTTAGCTACTCAGTTGAATGTTCCTCC...TGGAAAACAAACTGTTGTTAGTAAACAGGCATCAGCTTTGAGACACAGAAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000509633.1
ENST00000635689.1
3UTR-3UTR CCA 90 bp GGTAAGTCTTGTGTCCTTGGAGAGGTGTTTAGAATATATTCCATTTTAAAAGAGAGGGTGGAGGAAAAGTaGAAGCAGGTAGACTGGTTA +
Preference number: 2 (lower is better)
Translates to: GKSCVLGEVFRIYSILKERVEEK*KQVDWL
Trigger: TAACCAGTCTACCTGCTTCCACTTTTCCTCCACCCT...CTCTTTTAAAATGGAATATATTCTAAACACCTCTCCAAGGACACAAGACTTACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000344526.10
ENST00000502294.5
ENST00000509633.1
ENST00000634325.2
ENST00000634530.1
ENST00000635689.1
3UTR-3UTR CCA 90 bp ATTTTCCAGTGGCTAAAGGGAACGCTATACAGTAAAGAATTATGTAAGATGGATCAGAGATGGATGAAGTaGGTGACCATCGTCATTGTC +
Preference number: 2 (lower is better)
Translates to: IFQWLKGTLYSKELCKMDQRWMK*VTIVIV
Trigger: GACAATGACGATGGTCACCCACTTCATCCATCTCTG...ATCCATCTTACATAATTCTTTACTGTATAGCGTTCCCTTTAGCCACTGGAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509633.1
ENST00000635689.1
3UTR-3UTR CCA 90 bp GGTAAGTCTTGTGTCCTTGGAGAGGTGTTTAGAATATATTCCATTTTAAAAGAGGGGGACTGTATTCACTaGGCGATAATAAAGAGGAGG +
Preference number: 2 (lower is better)
Translates to: GKSCVLGEVFRIYSILKEGDCIH*AIIKRR
Trigger: CCTCCTCTTTATTATCGCCCAGTGAATACAGTCCCC...CTCTTTTAAAATGGAATATATTCTAAACACCTCTCCAAGGACACAAGACTTACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000509633.1
ENST00000635689.1
3UTR-3UTR TCA 90 bp ATTTTCCAGTGGCTAAAGGGAACGCTATACAGTAAAGAATTATGTAAGATGGATGCCCTGATAAAGTGCTaGATAAGACACAGAAATGCC +
Preference number: 2 (lower is better)
Translates to: IFQWLKGTLYSKELCKMDALIKC*IRHRNA
Trigger: GGCATTTCTGTGTCTTATTCAGCACTTTATCAGGGC...ATCCATCTTACATAATTCTTTACTGTATAGCGTTCCCTTTAGCCACTGGAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
3UTR-3UTR TCA 90 bp ACTTTTCTGTGTCTCAAAGCTGATGCCTGTTTACTAACAACAGTTTGTTTTCCATCTGTGTCTCAAAGCTaGTGCCTGTTTACTAACAAC +
Preference number: 2 (lower is better)
Translates to: TFLCLKADACLLTTVCFPSVSQS*CLFTNN
Trigger: GTTGTTAGTAAACAGGCATCAGCTTTGAGACACAGA...TGGAAAACAAACTGTTGTTAGTAAACAGGCATCAGCTTTGAGACACAGAAAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
3UTR-3UTR TCA 90 bp ACTTTTCTGTGTCTCAAAGCTGATGCCTGTTTACTAACAACAGTTTGTTTTCCATTTGTGGAGATAAGATaGGGGCAACAACAAAGACAA +
Preference number: 2 (lower is better)
Translates to: TFLCLKADACLLTTVCFPFVEIR*GQQQRQ
Trigger: TTGTCTTTGTTGTTGCCCTCATCTTATCTCCACAAA...TGGAAAACAAACTGTTGTTAGTAAACAGGCATCAGCTTTGAGACACAGAAAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
3UTR-3UTR TCA 90 bp ATTTTCCAGTGGCTAAAGGGAACGCTATACAGTAAAGAATTATGTAAGATGGATATATTCACTGGTCACTaGATATGTCCCAGGCATTGT +
Preference number: 2 (lower is better)
Translates to: IFQWLKGTLYSKELCKMDIFTGH*ICPRHC
Trigger: ACAATGCCTGGGACATATTCAGTGACCAGTGAATAT...ATCCATCTTACATAATTCTTTACTGTATAGCGTTCCCTTTAGCCACTGGAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
3UTR-3UTR TCA 90 bp ACTTTTCTGTGTCTCAAAGCTGATGCCTGTTTACTAACAACAGTTTGTTTTCCAATCTTCTGGTTTGGATaGCTTTTCTGTGTCTCAAAG +
Preference number: 2 (lower is better)
Translates to: TFLCLKADACLLTTVCFPIFWFG*LFCVSK
Trigger: CTTTGAGACACAGAAAAGTCATCCAAACCAGAAGAT...TGGAAAACAAACTGTTGTTAGTAAACAGGCATCAGCTTTGAGACACAGAAAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
3UTR-3UTR TCA 90 bp ACTTTTCTGTGTCTCAAAGCTGATGCCTGTTTACTAACAACAGTTTGTTTTCCATCTAGAGAATTTCACTaGTTTGCCTGTTCAAGAGAG +
Preference number: 2 (lower is better)
Translates to: TFLCLKADACLLTTVCFPSREFH*FACSRE
Trigger: CTCTCTTGAACAGGCAAATCAGTGAAATTCTCTAGA...TGGAAAACAAACTGTTGTTAGTAAACAGGCATCAGCTTTGAGACACAGAAAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000509633.1
ENST00000635689.1
3UTR-3UTR CCA 90 bp ATTTTCCAGTGGCTAAAGGGAACGCTATACAGTAAAGAATTATGTAAGATGGATAGGAATATTCAGAGATaGATGAAGTGGGTGACCATC +
Preference number: 2 (lower is better)
Translates to: IFQWLKGTLYSKELCKMDRNIQR*MKWVTI
Trigger: GATGGTCACCCACTTCATCCATCTCTGAATATTCCT...ATCCATCTTACATAATTCTTTACTGTATAGCGTTCCCTTTAGCCACTGGAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509633.1
ENST00000635689.1
3UTR-3UTR TCA 90 bp ATTTTCCAGTGGCTAAAGGGAACGCTATACAGTAAAGAATTATGTAAGATGGATCAGTTGATACCAGTGTaGAGGTGTGAACATTTCTTA +
Preference number: 2 (lower is better)
Translates to: IFQWLKGTLYSKELCKMDQLIPV*RCEHFL
Trigger: TAAGAAATGTTCACACCTTCACACTGGTATCAACTG...ATCCATCTTACATAATTCTTTACTGTATAGCGTTCCCTTTAGCCACTGGAAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
3UTR-3UTR CCA 90 bp ATTTTCCAGTGGCTAAAGGGAACGCTATACAGTAAAGAATTATGTAAGATGGATCTTGGCTCTAGAAGATaGAAGCAAACATCTCAAGTT +
Preference number: 2 (lower is better)
Translates to: IFQWLKGTLYSKELCKMDLGSRR*KQTSQV
Trigger: AACTTGAGATGTTTGCTTCCATCTTCTAGAGCCAAG...ATCCATCTTACATAATTCTTTACTGTATAGCGTTCCCTTTAGCCACTGGAAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
3UTR-3UTR CCA 90 bp ACTTTTCTGTGTCTCAAAGCTGATGCCTGTTTACTAACAACAGTTTGTTTTCCATGTGAAATTTCCAGATaGTGGTGGTTACATGTATGT +
Preference number: 2 (lower is better)
Translates to: TFLCLKADACLLTTVCFPCEISR*WWLHVC
Trigger: ACATACATGTAACCACCACCATCTGGAAATTTCACA...TGGAAAACAAACTGTTGTTAGTAAACAGGCATCAGCTTTGAGACACAGAAAAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
3UTR-3UTR CCA 90 bp ACTTTTCTGTGTCTCAAAGCTGATGCCTGTTTACTAACAACAGTTTGTTTTCCAATTTCCAGATGGTGGTaGTTACATGTATGTTTTCTT +
Preference number: 2 (lower is better)
Translates to: TFLCLKADACLLTTVCFPISRWW*LHVCFL
Trigger: AAGAAAACATACATGTAACCACCACCATCTGGAAAT...TGGAAAACAAACTGTTGTTAGTAAACAGGCATCAGCTTTGAGACACAGAAAAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
3UTR-3UTR CCA 90 bp ATTTTCCAGTGGCTAAAGGGAACGCTATACAGTAAAGAATTATGTAAGATGGATTGTGAAATTTCCAGATaGTGGTGGTTACATGTATGT +
Preference number: 2 (lower is better)
Translates to: IFQWLKGTLYSKELCKMDCEISR*WWLHVC
Trigger: ACATACATGTAACCACCACCATCTGGAAATTTCACA...ATCCATCTTACATAATTCTTTACTGTATAGCGTTCCCTTTAGCCACTGGAAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
3UTR-3UTR CCA 90 bp ATTTTCCAGTGGCTAAAGGGAACGCTATACAGTAAAGAATTATGTAAGATGGATGAAATTTCCAGATGGTaGTGGTTACATGTATGTTTT +
Preference number: 2 (lower is better)
Translates to: IFQWLKGTLYSKELCKMDEISRW*WLHVCF
Trigger: AAAACATACATGTAACCACCACCATCTGGAAATTTC...ATCCATCTTACATAATTCTTTACTGTATAGCGTTCCCTTTAGCCACTGGAAAAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
3UTR TCA 72 bp GGAGAATCACTTGAACCCGGGAGGTGGAAGTTGCAGTaGGCTGAGTTGGCACCATTGCACTACAGCCGTGCA +
Preference number: 3 (lower is better)
Translates to: GESLEPGRWKLQ*AELAPLHYSRA
Trigger: TGCACGGCTGTAGTGCAATGGTGCCAACTCAGCTCACTGCAACTTCCACCTCCCGGGTTCAAGTGATTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344526.10
ENST00000502294.5
ENST00000509633.1
ENST00000634325.2
ENST00000634530.1
ENST00000635689.1
3UTR GCA 72 bp GGAGGTGGAAGTTGCAGTGAGCTGAGTTGGCACCATTaGACTACAGCCGTGCAACAGTGTGAGACTTCGTCT +
Preference number: 3 (lower is better)
Translates to: GGGSCSELSWHH*TTAVQQCETSS
Trigger: AGACGAAGTCTCACACTGTTGCACGGCTGTAGTGCAATGGTGCCAACTCAGCTCACTGCAACTTCCACCTCC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344526.10
ENST00000502294.5
ENST00000509633.1
ENST00000634325.2
ENST00000634530.1
ENST00000635689.1
3UTR CCA 72 bp GTGATCAGGGTGGAGGAAAAGTGGAAGCAGGTAGACTaGTTAATAGGCTATTCTGGCAGGGCACGGTGGCTC +
Preference number: 3 (lower is better)
Translates to: VIRVEEKWKQVD*LIGYSGRARWL
Trigger: GAGCCACCGTGCCCTGCCAGAATAGCCTATTAACCAGTCTACCTGCTTCCACTTTTCCTCCACCCTGATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344526.10
ENST00000502294.5
ENST00000509633.1
ENST00000634325.2
ENST00000634530.1
ENST00000635689.1
3UTR CCA 72 bp GTAACCCTGTGTCAGTGTAAGTATTCCCAGGGTAACTaGGGACTGTATTCACTGGGCGATAATAAAGAGGAG +
Preference number: 3 (lower is better)
Translates to: VTLCQCKYSQGN*GLYSLGDNKEE
Trigger: CTCCTCTTTATTATCGCCCAGTGAATACAGTCCCCAGTTACCCTGGGAATACTTACACTGACACAGGGTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509633.1
ENST00000635689.1
3UTR CCA 72 bp AATGCATGTGTGTATGTGATCAGGGTGGAGGAAAAGTaGAAGCAGGTAGACTGGTTAATAGGCTATTCTGGC +
Preference number: 3 (lower is better)
Translates to: NACVYVIRVEEK*KQVDWLIGYSG
Trigger: GCCAGAATAGCCTATTAACCAGTCTACCTGCTTCCACTTTTCCTCCACCCTGATCACATACACACATGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344526.10
ENST00000502294.5
ENST00000509633.1
ENST00000634325.2
ENST00000634530.1
ENST00000635689.1
3UTR CCA 72 bp GAAGAAAGGATGTATAGTGGGCCATCTGGCAATCACTaGAGAAGTATAGTGGTTGTTGCAGTTGATACCAGT +
Preference number: 3 (lower is better)
Translates to: EERMYSGPSGNH*RSIVVVAVDTS
Trigger: ACTGGTATCAACTGCAACAACCACTATACTTCTCCAGTGATTGCCAGATGGCCCACTATACATCCTTTCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
3UTR-3UTR CAA 90 bp GGCAATCACTGGAGAAGTATAGTGGTTGTTGCAGTTGATACCAGTGTGAAGGTGGTAAGTCTTGTGTCCTaGGAGAGGTGTTTAGAATAT +
Preference number: 3 (lower is better)
Translates to: GNHWRSIVVVAVDTSVKVVSLVS*ERCLEY
Trigger: ATATTCTAAACACCTCTCCAAGGACACAAGACTTAC...CACCTTCACACTGGTATCAACTGCAACAACCACTATACTTCTCCAGTGATTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
3UTR-3UTR CAA 90 bp GGCAATCACTGGAGAAGTATAGTGGTTGTTGCAGTTGATACCAGTGTGAAGGTGACAAAAAGCACTGGGTaGCAGAAGAGGGATTTATTT +
Preference number: 3 (lower is better)
Translates to: GNHWRSIVVVAVDTSVKVTKSTG*QKRDLF
Trigger: AAATAAATCCCTCTTCTGCAACCCAGTGCTTTTTGT...CACCTTCACACTGGTATCAACTGCAACAACCACTATACTTCTCCAGTGATTGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
3UTR GCA 72 bp CTGGGCGATAATAAAGAGGAGGTGGTAAATTCCGTATaGCATAAGGAATATTCAGAGATGGATGAAGTGGGT +
Preference number: 3 (lower is better)
Translates to: LGDNKEEVVNSV*HKEYSEMDEVG
Trigger: ACCCACTTCATCCATCTCTGAATATTCCTTATGGCATACGGAATTTACCACCTCCTCTTTATTATCGCCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509633.1
ENST00000635689.1
3UTR-3UTR CAA 90 bp CATGAGGAGCATGGGGCAAGATGGAGAATGATAGGGAATGAAGTTAGAAAAGTCGTAAGTCTTGTGTCCTaGGAGAGGTGTTTAGAATAT +
Preference number: 3 (lower is better)
Translates to: HEEHGARWRMIGNEVRKVVSLVS*ERCLEY
Trigger: ATATTCTAAACACCTCTCCAAGGACACAAGACTTAC...GACTTTTCTAACTTCATTCCCTATCATTCTCCATCTTGCCCCATGCTCCTCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344526.10
ENST00000502294.5
ENST00000509633.1
ENST00000634325.2
ENST00000634530.1
ENST00000635689.1
3UTR-3UTR CAA 90 bp GGTAAGTCTTGTGTCCTTGGAGAGGTGTTTAGAATATATTCCATTTTAAAAGAGGAGAATTTCACTGATTaGCCTGTTCAAGAGAGGGAG +
Preference number: 3 (lower is better)
Translates to: GKSCVLGEVFRIYSILKEENFTD*PVQERE
Trigger: CTCCCTCTCTTGAACAGGCAAATCAGTGAAATTCTC...CTCTTTTAAAATGGAATATATTCTAAACACCTCTCCAAGGACACAAGACTTACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000509633.1
ENST00000635689.1
3UTR-3UTR CAA 90 bp ATTTTCCAGTGGCTAAAGGGAACGCTATACAGTAAAGAATTATGTAAGATGGATGAGAATTTCACTGATTaGCCTGTTCAAGAGAGGGAG +
Preference number: 3 (lower is better)
Translates to: IFQWLKGTLYSKELCKMDENFTD*PVQERE
Trigger: CTCCCTCTCTTGAACAGGCAAATCAGTGAAATTCTC...ATCCATCTTACATAATTCTTTACTGTATAGCGTTCCCTTTAGCCACTGGAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509633.1
ENST00000635689.1
3UTR-3UTR CAA 90 bp ACTTTTCTGTGTCTCAAAGCTGATGCCTGTTTACTAACAACAGTTTGTTTTCCAGTAAGTCTTGTGTCCTaGGAGAGGTGTTTAGAATAT +
Preference number: 3 (lower is better)
Translates to: TFLCLKADACLLTTVCFPVSLVS*ERCLEY
Trigger: ATATTCTAAACACCTCTCCAAGGACACAAGACTTAC...TGGAAAACAAACTGTTGTTAGTAAACAGGCATCAGCTTTGAGACACAGAAAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
3UTR-3UTR CAA 90 bp ATTTTCCAGTGGCTAAAGGGAACGCTATACAGTAAAGAATTATGTAAGATGGATAAAGTTAGATCCTACTaGGCTCTAGAAGATGGAAGC +
Preference number: 3 (lower is better)
Translates to: IFQWLKGTLYSKELCKMDKVRSY*ALEDGS
Trigger: GCTTCCATCTTCTAGAGCCAAGTAGGATCTAACTTT...ATCCATCTTACATAATTCTTTACTGTATAGCGTTCCCTTTAGCCACTGGAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
3UTR-3UTR CAA 90 bp ATTTTCCAGTGGCTAAAGGGAACGCTATACAGTAAAGAATTATGTAAGATGGATAGACTTTGTAGCCTCTaGATATTTCTATTTCGGTTC +
Preference number: 3 (lower is better)
Translates to: IFQWLKGTLYSKELCKMDRLCSL*IFLFRF
Trigger: GAACCGAAATAGAAATATCAAGAGGCTACAAAGTCT...ATCCATCTTACATAATTCTTTACTGTATAGCGTTCCCTTTAGCCACTGGAAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
CDS-3UTR GCA 90 bp GGCAATCACTGGAGAAGTATAGTGGTTGTTGCAGTTGATACCAGTGTGAAGGTGTGCAGCAGGCTCAGCTaGAATAGGTGGGGCAGCGGG +
Preference number: 4 (lower is better)
Translates to: GNHWRSIVVVAVDTSVKVCSRLS*NRWGSG
Trigger: CCCGCTGCCCCACCTATTGCAGCTGAGCCTGCTGCA...CACCTTCACACTGGTATCAACTGCAACAACCACTATACTTCTCCAGTGATTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
CDS-3UTR GCA 90 bp TCTGGCAATCACTGGAGAAGTATAGTGGTTGTTGCAGTTGATACCAGTGTGAAGTGCAGCAGGCTCAGCTaGAATAGGTGGGGCAGCGGG +
Preference number: 4 (lower is better)
Translates to: SGNHWRSIVVVAVDTSVKCSRLS*NRWGSG
Trigger: CCCGCTGCCCCACCTATTGCAGCTGAGCCTGCTGCA...CTTCACACTGGTATCAACTGCAACAACCACTATACTTCTCCAGTGATTGCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
CDS-3UTR GCA 90 bp CATGAGGAGCATGGGGCAAGATGGAGAATGATAGGGAATGAAGTTAGAAAAGTCTGCAGCAGGCTCAGCTaGAATAGGTGGGGCAGCGGG +
Preference number: 4 (lower is better)
Translates to: HEEHGARWRMIGNEVRKVCSRLS*NRWGSG
Trigger: CCCGCTGCCCCACCTATTGCAGCTGAGCCTGCTGCA...GACTTTTCTAACTTCATTCCCTATCATTCTCCATCTTGCCCCATGCTCCTCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000344526.10
ENST00000502294.5
ENST00000509633.1
ENST00000634325.2
ENST00000634530.1
ENST00000635689.1
CDS-3UTR GCA 90 bp AGGAATATTCAGAGATGGATGAAGTGGGTGACCATCGTCATTGTCATCCTCACCTGTGGCTGTAAGAGGTaGAGCTGCAGCAGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: RNIQRWMKWVTIVIVILTCGCKR*SCSRLS
Trigger: GCTGAGCCTGCTGCAGCTGCACCTCTTACAGCCACA...GGTGAGGATGACAATGACGATGGTCACCCACTTCATCCATCTCTGAATATTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509633.1
ENST00000635689.1
CDS-3UTR TCA 90 bp AGGAATATTCAGAGATGGATGAAGTGGGTGACCATCGTCATTGTCATCCTCACCGAGGCGGACAGATCATaGGGTCAGGAGATCAAGACC +
Preference number: 4 (lower is better)
Translates to: RNIQRWMKWVTIVIVILTEADRS*GQEIKT
Trigger: GGTCTTGATCTCCTGACCTCATGATCTGTCCGCCTC...GGTGAGGATGACAATGACGATGGTCACCCACTTCATCCATCTCTGAATATTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509633.1
ENST00000635689.1
CDS-3UTR GCA 90 bp ATGTGTGTATGTGATCAGGGTGGAGGAAAAGTGGAAGCAGGTAGACTGGTTAATTGTGGCTGTAAGAGGTaGAGCTGCAGCAGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: MCVCDQGGGKVEAGRLVNCGCKR*SCSRLS
Trigger: GCTGAGCCTGCTGCAGCTGCACCTCTTACAGCCACA...ATTAACCAGTCTACCTGCTTCCACTTTTCCTCCACCCTGATCACATACACACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344526.10
ENST00000502294.5
ENST00000509633.1
ENST00000634325.2
ENST00000634530.1
ENST00000635689.1
CDS-3UTR GCA 90 bp CATGAGGAGCATGGGGCAAGATGGAGAATGATAGGGAATGAAGTTAGAAAAGTCTGTGGCTGTAAGAGGTaGAGCTGCAGCAGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: HEEHGARWRMIGNEVRKVCGCKR*SCSRLS
Trigger: GCTGAGCCTGCTGCAGCTGCACCTCTTACAGCCACA...GACTTTTCTAACTTCATTCCCTATCATTCTCCATCTTGCCCCATGCTCCTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344526.10
ENST00000502294.5
ENST00000509633.1
ENST00000634325.2
ENST00000634530.1
ENST00000635689.1
CDS-3UTR CCA 90 bp ATGTGTGTATGTGATCAGGGTGGAGGAAAAGTGGAAGCAGGTAGACTGGTTAATAGAAGGGTGAGGTTCTaGGGCAGCAGGCTTGGCTGT +
Preference number: 4 (lower is better)
Translates to: MCVCDQGGGKVEAGRLVNRRVRF*GSRLGC
Trigger: ACAGCCAAGCCTGCTGCCCCAGAACCTCACCCTTCT...ATTAACCAGTCTACCTGCTTCCACTTTTCCTCCACCCTGATCACATACACACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344526.10
ENST00000502294.5
ENST00000509633.1
ENST00000634325.2
ENST00000634530.1
ENST00000635689.1
CDS-3UTR CCA 90 bp CATGAGGAGCATGGGGCAAGATGGAGAATGATAGGGAATGAAGTTAGAAAAGTCGTATTCCCAGCACTTTaGGAGGCCGAGGCGGACAGA +
Preference number: 4 (lower is better)
Translates to: HEEHGARWRMIGNEVRKVVFPAL*EAEADR
Trigger: TCTGTCCGCCTCGGCCTCCCAAAGTGCTGGGAATAC...GACTTTTCTAACTTCATTCCCTATCATTCTCCATCTTGCCCCATGCTCCTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344526.10
ENST00000502294.5
ENST00000509633.1
ENST00000634325.2
ENST00000634530.1
ENST00000635689.1
CDS-3UTR TCA 90 bp AGGAATATTCAGAGATGGATGAAGTGGGTGACCATCGTCATTGTCATCCTCACCAGGTGGAAGTTGCAGTaGGCTGAGTTGGCACCATTG +
Preference number: 4 (lower is better)
Translates to: RNIQRWMKWVTIVIVILTRWKLQ*AELAPL
Trigger: CAATGGTGCCAACTCAGCTCACTGCAACTTCCACCT...GGTGAGGATGACAATGACGATGGTCACCCACTTCATCCATCTCTGAATATTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509633.1
ENST00000635689.1
CDS-3UTR TCA 90 bp GGCAATCACTGGAGAAGTATAGTGGTTGTTGCAGTTGATACCAGTGTGAAGGTGAGGTGGAAGTTGCAGTaGGCTGAGTTGGCACCATTG +
Preference number: 4 (lower is better)
Translates to: GNHWRSIVVVAVDTSVKVRWKLQ*AELAPL
Trigger: CAATGGTGCCAACTCAGCTCACTGCAACTTCCACCT...CACCTTCACACTGGTATCAACTGCAACAACCACTATACTTCTCCAGTGATTGCC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
CDS-3UTR TCA 90 bp TCTGGCAATCACTGGAGAAGTATAGTGGTTGTTGCAGTTGATACCAGTGTGAAGGAGGCGGACAGATCATaGGGTCAGGAGATCAAGACC +
Preference number: 4 (lower is better)
Translates to: SGNHWRSIVVVAVDTSVKEADRS*GQEIKT
Trigger: GGTCTTGATCTCCTGACCTCATGATCTGTCCGCCTC...CTTCACACTGGTATCAACTGCAACAACCACTATACTTCTCCAGTGATTGCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
CDS-3UTR CCA 90 bp GGCAATCACTGGAGAAGTATAGTGGTTGTTGCAGTTGATACCAGTGTGAAGGTGCCGTCTCTCCAGCAATaGCACTTCACAGCCATAGGA +
Preference number: 4 (lower is better)
Translates to: GNHWRSIVVVAVDTSVKVPSLQQ*HFTAIG
Trigger: TCCTATGGCTGTGAAGTGCCATTGCTGGAGAGACGG...CACCTTCACACTGGTATCAACTGCAACAACCACTATACTTCTCCAGTGATTGCC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509633.1
ENST00000635689.1
CDS-3UTR TCA 90 bp TCTGGCAATCACTGGAGAAGTATAGTGGTTGTTGCAGTTGATACCAGTGTGAAGTGTCATCCTCACCAATaGAGGGGAACCGTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: SGNHWRSIVVVAVDTSVKCHPHQ*RGTVSS
Trigger: GGAAGAGACGGTTCCCCTTCATTGGTGAGGATGACA...CTTCACACTGGTATCAACTGCAACAACCACTATACTTCTCCAGTGATTGCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344526.10
ENST00000634325.2
CDS-3UTR TCA 90 bp ATGTGTGTATGTGATCAGGGTGGAGGAAAAGTGGAAGCAGGTAGACTGGTTAATTGTCATCCTCACCAATaGAGGGGAACCGTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: MCVCDQGGGKVEAGRLVNCHPHQ*RGTVSS
Trigger: GGAAGAGACGGTTCCCCTTCATTGGTGAGGATGACA...ATTAACCAGTCTACCTGCTTCCACTTTTCCTCCACCCTGATCACATACACACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000502294.5
ENST00000634325.2
ENST00000634530.1
CDS-3UTR TCA 90 bp GGCAATCACTGGAGAAGTATAGTGGTTGTTGCAGTTGATACCAGTGTGAAGGTGGACTCCAGGCTAGGCTaGATGATTGCCATTTCAGTC +
Preference number: 4 (lower is better)
Translates to: GNHWRSIVVVAVDTSVKVDSRLG*MIAISV
Trigger: GACTGAAATGGCAATCATTCAGCCTAGCCTGGAGTC...CACCTTCACACTGGTATCAACTGCAACAACCACTATACTTCTCCAGTGATTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
CDS-3UTR TCA 90 bp ATGTGTGTATGTGATCAGGGTGGAGGAAAAGTGGAAGCAGGTAGACTGGTTAATAGGTGGAAGTTGCAGTaGGCTGAGTTGGCACCATTG +
Preference number: 4 (lower is better)
Translates to: MCVCDQGGGKVEAGRLVNRWKLQ*AELAPL
Trigger: CAATGGTGCCAACTCAGCTCACTGCAACTTCCACCT...ATTAACCAGTCTACCTGCTTCCACTTTTCCTCCACCCTGATCACATACACACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344526.10
ENST00000502294.5
ENST00000509633.1
ENST00000634325.2
ENST00000634530.1
ENST00000635689.1
CDS-3UTR CCA 90 bp TTATCATCCTATAGTAGCTGTATAATCAGACTCCAGGCTAGGCTGAATGATTGCAGAAGGGTGAGGTTCTaGGGCAGCAGGCTTGGCTGT +
Preference number: 4 (lower is better)
Translates to: LSSYSSCIIRLQARLNDCRRVRF*GSRLGC
Trigger: ACAGCCAAGCCTGCTGCCCCAGAACCTCACCCTTCT...GCAATCATTCAGCCTAGCCTGGAGTCTGATTATACAGCTACTATAGGATGATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512173.1
ENST00000634747.1
CDS-3UTR CCA 90 bp ATGTGTGTATGTGATCAGGGTGGAGGAAAAGTGGAAGCAGGTAGACTGGTTAATGTTAATAGGCTATTCTaGCAGGGCACGGTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: MCVCDQGGGKVEAGRLVNVNRLF*QGTVAH
Trigger: GTGAGCCACCGTGCCCTGCCAGAATAGCCTATTAAC...ATTAACCAGTCTACCTGCTTCCACTTTTCCTCCACCCTGATCACATACACACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344526.10
ENST00000502294.5
ENST00000509633.1
ENST00000634325.2
ENST00000634530.1
ENST00000635689.1
CDS-3UTR CCA 90 bp TCTGGCAATCACTGGAGAAGTATAGTGGTTGTTGCAGTTGATACCAGTGTGAAGGTTAATAGGCTATTCTaGCAGGGCACGGTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: SGNHWRSIVVVAVDTSVKVNRLF*QGTVAH
Trigger: GTGAGCCACCGTGCCCTGCCAGAATAGCCTATTAAC...CTTCACACTGGTATCAACTGCAACAACCACTATACTTCTCCAGTGATTGCCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
CDS-3UTR CCA 90 bp CATGAGGAGCATGGGGCAAGATGGAGAATGATAGGGAATGAAGTTAGAAAAGTCGTTAATAGGCTATTCTaGCAGGGCACGGTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: HEEHGARWRMIGNEVRKVVNRLF*QGTVAH
Trigger: GTGAGCCACCGTGCCCTGCCAGAATAGCCTATTAAC...GACTTTTCTAACTTCATTCCCTATCATTCTCCATCTTGCCCCATGCTCCTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344526.10
ENST00000502294.5
ENST00000509633.1
ENST00000634325.2
ENST00000634530.1
ENST00000635689.1
CDS-3UTR TCA 90 bp CATGAGGAGCATGGGGCAAGATGGAGAATGATAGGGAATGAAGTTAGAAAAGTCGAAGTTGCAGTGAGCTaGGTTGGCACCATTGCACTA +
Preference number: 4 (lower is better)
Translates to: HEEHGARWRMIGNEVRKVEVAVS*VGTIAL
Trigger: TAGTGCAATGGTGCCAACTCAGCTCACTGCAACTTC...GACTTTTCTAACTTCATTCCCTATCATTCTCCATCTTGCCCCATGCTCCTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344526.10
ENST00000502294.5
ENST00000509633.1
ENST00000634325.2
ENST00000634530.1
ENST00000635689.1
CDS-3UTR TCA 90 bp GGCAATCACTGGAGAAGTATAGTGGTTGTTGCAGTTGATACCAGTGTGAAGGTGAGTGGTTGTTGCAGTTaGTACCAGTGTGAAGGTGTG +
Preference number: 4 (lower is better)
Translates to: GNHWRSIVVVAVDTSVKVSGCCS*YQCEGV
Trigger: CACACCTTCACACTGGTATCAACTGCAACAACCACT...CACCTTCACACTGGTATCAACTGCAACAACCACTATACTTCTCCAGTGATTGCC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
CDS-3UTR TCA 90 bp AGGAATATTCAGAGATGGATGAAGTGGGTGACCATCGTCATTGTCATCCTCACCAGTGGTTGTTGCAGTTaGTACCAGTGTGAAGGTGTG +
Preference number: 4 (lower is better)
Translates to: RNIQRWMKWVTIVIVILTSGCCS*YQCEGV
Trigger: CACACCTTCACACTGGTATCAACTGCAACAACCACT...GGTGAGGATGACAATGACGATGGTCACCCACTTCATCCATCTCTGAATATTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509633.1
ENST00000635689.1
CDS-3UTR GCA 90 bp GGTAAGTCTTGTGTCCTTGGAGAGGTGTTTAGAATATATTCCATTTTAAAAGAGTGCAGCAGGCTCAGCTaGAATAGGTGGGGCAGCGGG +
Preference number: 4 (lower is better)
Translates to: GKSCVLGEVFRIYSILKECSRLS*NRWGSG
Trigger: CCCGCTGCCCCACCTATTGCAGCTGAGCCTGCTGCA...CTCTTTTAAAATGGAATATATTCTAAACACCTCTCCAAGGACACAAGACTTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000344526.10
ENST00000502294.5
ENST00000509633.1
ENST00000634325.2
ENST00000634530.1
ENST00000635689.1
CDS-3UTR GCA 90 bp ATGTGTGTATGTGATCAGGGTGGAGGAAAAGTGGAAGCAGGTAGACTGGTTAATCCCTTGTTTCCAGGGTaGAAACTAGTGGATGCAGCT +
Preference number: 4 (lower is better)
Translates to: MCVCDQGGGKVEAGRLVNPLFPG*KLVDAA
Trigger: AGCTGCATCCACTAGTTTGCACCCTGGAAACAAGGG...ATTAACCAGTCTACCTGCTTCCACTTTTCCTCCACCCTGATCACATACACACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502294.5
ENST00000634530.1
CDS-3UTR CCA 90 bp GGCAATCACTGGAGAAGTATAGTGGTTGTTGCAGTTGATACCAGTGTGAAGGTGCAGAGATGGATGAAGTaGGTGACCATCGTCATTGTC +
Preference number: 4 (lower is better)
Translates to: GNHWRSIVVVAVDTSVKVQRWMK*VTIVIV
Trigger: GACAATGACGATGGTCACCCACTTCATCCATCTCTG...CACCTTCACACTGGTATCAACTGCAACAACCACTATACTTCTCCAGTGATTGCC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
CDS-3UTR CCA 90 bp AGGAATATTCAGAGATGGATGAAGTGGGTGACCATCGTCATTGTCATCCTCACCCAGAGATGGATGAAGTaGGTGACCATCGTCATTGTC +
Preference number: 4 (lower is better)
Translates to: RNIQRWMKWVTIVIVILTQRWMK*VTIVIV
Trigger: GACAATGACGATGGTCACCCACTTCATCCATCTCTG...GGTGAGGATGACAATGACGATGGTCACCCACTTCATCCATCTCTGAATATTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509633.1
ENST00000635689.1
CDS-3UTR CCA 90 bp CATGAGGAGCATGGGGCAAGATGGAGAATGATAGGGAATGAAGTTAGAAAAGTCTATTCCCAGGGTAACTaGGGACTGTATTCACTGGGC +
Preference number: 4 (lower is better)
Translates to: HEEHGARWRMIGNEVRKVYSQGN*GLYSLG
Trigger: GCCCAGTGAATACAGTCCCCAGTTACCCTGGGAATA...GACTTTTCTAACTTCATTCCCTATCATTCTCCATCTTGCCCCATGCTCCTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344526.10
ENST00000502294.5
ENST00000509633.1
ENST00000634325.2
ENST00000634530.1
ENST00000635689.1
CDS-3UTR CCA 90 bp ATGTGTGTATGTGATCAGGGTGGAGGAAAAGTGGAAGCAGGTAGACTGGTTAATTATTCCCAGGGTAACTaGGGACTGTATTCACTGGGC +
Preference number: 4 (lower is better)
Translates to: MCVCDQGGGKVEAGRLVNYSQGN*GLYSLG
Trigger: GCCCAGTGAATACAGTCCCCAGTTACCCTGGGAATA...ATTAACCAGTCTACCTGCTTCCACTTTTCCTCCACCCTGATCACATACACACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344526.10
ENST00000502294.5
ENST00000509633.1
ENST00000634325.2
ENST00000634530.1
ENST00000635689.1
CDS-3UTR CCA 90 bp ATCCAGGAGAAGTTAGAATCCAGGGATACGAAGGTAACCCTGTGTCAGTGTAAGAGGGTGGAGGAAAAGTaGAAGCAGGTAGACTGGTTA +
Preference number: 4 (lower is better)
Translates to: IQEKLESRDTKVTLCQCKRVEEK*KQVDWL
Trigger: TAACCAGTCTACCTGCTTCCACTTTTCCTCCACCCT...CTTACACTGACACAGGGTTACCTTCGTATCCCTGGATTCTAACTTCTCCTGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509633.1
ENST00000635689.1
CDS-3UTR TCA 90 bp ATGTGTGTATGTGATCAGGGTGGAGGAAAAGTGGAAGCAGGTAGACTGGTTAATAGTGGTTGTTGCAGTTaGTACCAGTGTGAAGGTGTG +
Preference number: 4 (lower is better)
Translates to: MCVCDQGGGKVEAGRLVNSGCCS*YQCEGV
Trigger: CACACCTTCACACTGGTATCAACTGCAACAACCACT...ATTAACCAGTCTACCTGCTTCCACTTTTCCTCCACCCTGATCACATACACACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
CDS-3UTR TCA 90 bp ATGTGTGTATGTGATCAGGGTGGAGGAAAAGTGGAAGCAGGTAGACTGGTTAATACCTCTTTGAGGTCCTaGCTTTCTGGCCACAAAAGA +
Preference number: 4 (lower is better)
Translates to: MCVCDQGGGKVEAGRLVNTSLRS*LSGHKR
Trigger: TCTTTTGTGGCCAGAAAGTCAGGACCTCAAAGAGGT...ATTAACCAGTCTACCTGCTTCCACTTTTCCTCCACCCTGATCACATACACACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
CDS-3UTR TCA 90 bp TCTGGCAATCACTGGAGAAGTATAGTGGTTGTTGCAGTTGATACCAGTGTGAAGACCTCTTTGAGGTCCTaGCTTTCTGGCCACAAAAGA +
Preference number: 4 (lower is better)
Translates to: SGNHWRSIVVVAVDTSVKTSLRS*LSGHKR
Trigger: TCTTTTGTGGCCAGAAAGTCAGGACCTCAAAGAGGT...CTTCACACTGGTATCAACTGCAACAACCACTATACTTCTCCAGTGATTGCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
CDS-3UTR TCA 90 bp AGGAATATTCAGAGATGGATGAAGTGGGTGACCATCGTCATTGTCATCCTCACCAAACTTATACCTCTTTaGGGTCCTGACTTTCTGGCC +
Preference number: 4 (lower is better)
Translates to: RNIQRWMKWVTIVIVILTKLIPL*GPDFLA
Trigger: GGCCAGAAAGTCAGGACCTCAAAGAGGTATAAGTTT...GGTGAGGATGACAATGACGATGGTCACCCACTTCATCCATCTCTGAATATTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509633.1
ENST00000635689.1
CDS-3UTR GCA 90 bp ACTTTTCTGTGTCTCAAAGCTGATGCCTGTTTACTAACAACAGTTTGTTTTCCATGTGGCTGTAAGAGGTaGAGCTGCAGCAGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: TFLCLKADACLLTTVCFPCGCKR*SCSRLS
Trigger: GCTGAGCCTGCTGCAGCTGCACCTCTTACAGCCACA...TGGAAAACAAACTGTTGTTAGTAAACAGGCATCAGCTTTGAGACACAGAAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
CDS-3UTR GCA 90 bp ACTTTTCTGTGTCTCAAAGCTGATGCCTGTTTACTAACAACAGTTTGTTTTCCACCGGGAGGTGGAAGTTaGAGTGAGCTGAGTTGGCAC +
Preference number: 4 (lower is better)
Translates to: TFLCLKADACLLTTVCFPPGGGS*SELSWH
Trigger: GTGCCAACTCAGCTCACTGCAACTTCCACCTCCCGG...TGGAAAACAAACTGTTGTTAGTAAACAGGCATCAGCTTTGAGACACAGAAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
CDS-3UTR CCA 90 bp TCTGGCAATCACTGGAGAAGTATAGTGGTTGTTGCAGTTGATACCAGTGTGAAGCAGAGATGGATGAAGTaGGTGACCATCGTCATTGTC +
Preference number: 4 (lower is better)
Translates to: SGNHWRSIVVVAVDTSVKQRWMK*VTIVIV
Trigger: GACAATGACGATGGTCACCCACTTCATCCATCTCTG...CTTCACACTGGTATCAACTGCAACAACCACTATACTTCTCCAGTGATTGCCAGA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
CDS-3UTR CCA 90 bp ATGTGTGTATGTGATCAGGGTGGAGGAAAAGTGGAAGCAGGTAGACTGGTTAATCAGAGATGGATGAAGTaGGTGACCATCGTCATTGTC +
Preference number: 4 (lower is better)
Translates to: MCVCDQGGGKVEAGRLVNQRWMK*VTIVIV
Trigger: GACAATGACGATGGTCACCCACTTCATCCATCTCTG...ATTAACCAGTCTACCTGCTTCCACTTTTCCTCCACCCTGATCACATACACACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344526.10
ENST00000502294.5
ENST00000509633.1
ENST00000634325.2
ENST00000634530.1
ENST00000635689.1
CDS-3UTR CCA 90 bp TCTGGCAATCACTGGAGAAGTATAGTGGTTGTTGCAGTTGATACCAGTGTGAAGGGGGACTGTATTCACTaGGCGATAATAAAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: SGNHWRSIVVVAVDTSVKGDCIH*AIIKRR
Trigger: CCTCCTCTTTATTATCGCCCAGTGAATACAGTCCCC...CTTCACACTGGTATCAACTGCAACAACCACTATACTTCTCCAGTGATTGCCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
CDS-3UTR CCA 90 bp CATGAGGAGCATGGGGCAAGATGGAGAATGATAGGGAATGAAGTTAGAAAAGTCGGGGACTGTATTCACTaGGCGATAATAAAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: HEEHGARWRMIGNEVRKVGDCIH*AIIKRR
Trigger: CCTCCTCTTTATTATCGCCCAGTGAATACAGTCCCC...GACTTTTCTAACTTCATTCCCTATCATTCTCCATCTTGCCCCATGCTCCTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000344526.10
ENST00000502294.5
ENST00000509633.1
ENST00000634325.2
ENST00000634530.1
ENST00000635689.1
CDS-3UTR CCA 90 bp ATGTGTGTATGTGATCAGGGTGGAGGAAAAGTGGAAGCAGGTAGACTGGTTAATAGGGTGGAGGAAAAGTaGAAGCAGGTAGACTGGTTA +
Preference number: 4 (lower is better)
Translates to: MCVCDQGGGKVEAGRLVNRVEEK*KQVDWL
Trigger: TAACCAGTCTACCTGCTTCCACTTTTCCTCCACCCT...ATTAACCAGTCTACCTGCTTCCACTTTTCCTCCACCCTGATCACATACACACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344526.10
ENST00000502294.5
ENST00000509633.1
ENST00000634325.2
ENST00000634530.1
ENST00000635689.1
CDS-3UTR CCA 90 bp TCTGGCAATCACTGGAGAAGTATAGTGGTTGTTGCAGTTGATACCAGTGTGAAGAGGGTGGAGGAAAAGTaGAAGCAGGTAGACTGGTTA +
Preference number: 4 (lower is better)
Translates to: SGNHWRSIVVVAVDTSVKRVEEK*KQVDWL
Trigger: TAACCAGTCTACCTGCTTCCACTTTTCCTCCACCCT...CTTCACACTGGTATCAACTGCAACAACCACTATACTTCTCCAGTGATTGCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
CDS-3UTR CCA 90 bp GGCAATCACTGGAGAAGTATAGTGGTTGTTGCAGTTGATACCAGTGTGAAGGTGGAGCATGGGGCAAGATaGAGAATGATAGGGAATGAA +
Preference number: 4 (lower is better)
Translates to: GNHWRSIVVVAVDTSVKVEHGAR*RMIGNE
Trigger: TTCATTCCCTATCATTCTCCATCTTGCCCCATGCTC...CACCTTCACACTGGTATCAACTGCAACAACCACTATACTTCTCCAGTGATTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
CDS-3UTR TCA 90 bp TTATCATCCTATAGTAGCTGTATAATCAGACTCCAGGCTAGGCTGAATGATTGCGACTCCAGGCTAGGCTaGATGATTGCCATTTCAGTC +
Preference number: 4 (lower is better)
Translates to: LSSYSSCIIRLQARLNDCDSRLG*MIAISV
Trigger: GACTGAAATGGCAATCATTCAGCCTAGCCTGGAGTC...GCAATCATTCAGCCTAGCCTGGAGTCTGATTATACAGCTACTATAGGATGATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512173.1
ENST00000634747.1
CDS-3UTR TCA 90 bp CATGAGGAGCATGGGGCAAGATGGAGAATGATAGGGAATGAAGTTAGAAAAGTCGCCCTGATAAAGTGCTaGATAAGACACAGAAATGCC +
Preference number: 4 (lower is better)
Translates to: HEEHGARWRMIGNEVRKVALIKC*IRHRNA
Trigger: GGCATTTCTGTGTCTTATTCAGCACTTTATCAGGGC...GACTTTTCTAACTTCATTCCCTATCATTCTCCATCTTGCCCCATGCTCCTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344526.10
ENST00000502294.5
ENST00000509633.1
ENST00000634325.2
ENST00000634530.1
ENST00000635689.1
CDS-3UTR TCA 90 bp TCTGGCAATCACTGGAGAAGTATAGTGGTTGTTGCAGTTGATACCAGTGTGAAGAAACTTATACCTCTTTaGGGTCCTGACTTTCTGGCC +
Preference number: 4 (lower is better)
Translates to: SGNHWRSIVVVAVDTSVKKLIPL*GPDFLA
Trigger: GGCCAGAAAGTCAGGACCTCAAAGAGGTATAAGTTT...CTTCACACTGGTATCAACTGCAACAACCACTATACTTCTCCAGTGATTGCCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
CDS-3UTR TCA 90 bp CATGAGGAGCATGGGGCAAGATGGAGAATGATAGGGAATGAAGTTAGAAAAGTCAAGCTTCATTTTGATTaGCCCTTGTTTCCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: HEEHGARWRMIGNEVRKVKLHFD*PLFPGC
Trigger: GCACCCTGGAAACAAGGGTCAATCAAAATGAAGCTT...GACTTTTCTAACTTCATTCCCTATCATTCTCCATCTTGCCCCATGCTCCTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000502294.5
ENST00000634530.1
CDS-3UTR TCA 90 bp CATGAGGAGCATGGGGCAAGATGGAGAATGATAGGGAATGAAGTTAGAAAAGTCGGAGAAGCTTCATTTTaGTTGACCCTTGTTTCCAGG +
Preference number: 4 (lower is better)
Translates to: HEEHGARWRMIGNEVRKVGEASF*LTLVSR
Trigger: CCTGGAAACAAGGGTCAATCAAAATGAAGCTTCTCC...GACTTTTCTAACTTCATTCCCTATCATTCTCCATCTTGCCCCATGCTCCTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000502294.5
ENST00000634530.1
CDS-3UTR GCA 90 bp ATGTGTGTATGTGATCAGGGTGGAGGAAAAGTGGAAGCAGGTAGACTGGTTAATAAGCAACACATACAATaGAGGCCCAAAGGAGAAGCT +
Preference number: 4 (lower is better)
Translates to: MCVCDQGGGKVEAGRLVNKQHIQ*RPKGEA
Trigger: AGCTTCTCCTTTGGGCCTGCATTGTATGTGTTGCTT...ATTAACCAGTCTACCTGCTTCCACTTTTCCTCCACCCTGATCACATACACACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344526.10
ENST00000502294.5
ENST00000509633.1
ENST00000634325.2
ENST00000634530.1
ENST00000635689.1
CDS-3UTR GCA 90 bp TCTGGCAATCACTGGAGAAGTATAGTGGTTGTTGCAGTTGATACCAGTGTGAAGAAGCAACACATACAATaGAGGCCCAAAGGAGAAGCT +
Preference number: 4 (lower is better)
Translates to: SGNHWRSIVVVAVDTSVKKQHIQ*RPKGEA
Trigger: AGCTTCTCCTTTGGGCCTGCATTGTATGTGTTGCTT...CTTCACACTGGTATCAACTGCAACAACCACTATACTTCTCCAGTGATTGCCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
CDS-3UTR GCA 90 bp CATGAGGAGCATGGGGCAAGATGGAGAATGATAGGGAATGAAGTTAGAAAAGTCAAGCAACACATACAATaGAGGCCCAAAGGAGAAGCT +
Preference number: 4 (lower is better)
Translates to: HEEHGARWRMIGNEVRKVKQHIQ*RPKGEA
Trigger: AGCTTCTCCTTTGGGCCTGCATTGTATGTGTTGCTT...GACTTTTCTAACTTCATTCCCTATCATTCTCCATCTTGCCCCATGCTCCTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344526.10
ENST00000502294.5
ENST00000509633.1
ENST00000634325.2
ENST00000634530.1
ENST00000635689.1
CDS-3UTR CCA 90 bp ATTTTCCAGTGGCTAAAGGGAACGCTATACAGTAAAGAATTATGTAAGATGGATAGAAGGGTGAGGTTCTaGGGCAGCAGGCTTGGCTGT +
Preference number: 4 (lower is better)
Translates to: IFQWLKGTLYSKELCKMDRRVRF*GSRLGC
Trigger: ACAGCCAAGCCTGCTGCCCCAGAACCTCACCCTTCT...ATCCATCTTACATAATTCTTTACTGTATAGCGTTCCCTTTAGCCACTGGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
CDS-3UTR CCA 90 bp ATGTGTGTATGTGATCAGGGTGGAGGAAAAGTGGAAGCAGGTAGACTGGTTAATGAGCATGGGGCAAGATaGAGAATGATAGGGAATGAA +
Preference number: 4 (lower is better)
Translates to: MCVCDQGGGKVEAGRLVNEHGAR*RMIGNE
Trigger: TTCATTCCCTATCATTCTCCATCTTGCCCCATGCTC...ATTAACCAGTCTACCTGCTTCCACTTTTCCTCCACCCTGATCACATACACACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344526.10
ENST00000502294.5
ENST00000509633.1
ENST00000634325.2
ENST00000634530.1
ENST00000635689.1
CDS-3UTR CCA 90 bp GGCAATCACTGGAGAAGTATAGTGGTTGTTGCAGTTGATACCAGTGTGAAGGTGCCATCTGGCAATCACTaGAGAAGTATAGTGGTTGTT +
Preference number: 4 (lower is better)
Translates to: GNHWRSIVVVAVDTSVKVPSGNH*RSIVVV
Trigger: AACAACCACTATACTTCTCCAGTGATTGCCAGATGG...CACCTTCACACTGGTATCAACTGCAACAACCACTATACTTCTCCAGTGATTGCC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
CDS-3UTR TCA 90 bp AGGAATATTCAGAGATGGATGAAGTGGGTGACCATCGTCATTGTCATCCTCACCTCTAGAGAATTTCACTaGTTTGCCTGTTCAAGAGAG +
Preference number: 4 (lower is better)
Translates to: RNIQRWMKWVTIVIVILTSREFH*FACSRE
Trigger: CTCTCTTGAACAGGCAAATCAGTGAAATTCTCTAGA...GGTGAGGATGACAATGACGATGGTCACCCACTTCATCCATCTCTGAATATTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509633.1
ENST00000635689.1
CDS-3UTR TCA 90 bp GGTAAGTCTTGTGTCCTTGGAGAGGTGTTTAGAATATATTCCATTTTAAAAGAGGAGGCGGACAGATCATaGGGTCAGGAGATCAAGACC +
Preference number: 4 (lower is better)
Translates to: GKSCVLGEVFRIYSILKEEADRS*GQEIKT
Trigger: GGTCTTGATCTCCTGACCTCATGATCTGTCCGCCTC...CTCTTTTAAAATGGAATATATTCTAAACACCTCTCCAAGGACACAAGACTTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344526.10
ENST00000502294.5
ENST00000509633.1
ENST00000634325.2
ENST00000634530.1
ENST00000635689.1
CDS-3UTR TCA 90 bp ATGTGTGTATGTGATCAGGGTGGAGGAAAAGTGGAAGCAGGTAGACTGGTTAATATATTCACTGGTCACTaGATATGTCCCAGGCATTGT +
Preference number: 4 (lower is better)
Translates to: MCVCDQGGGKVEAGRLVNIFTGH*ICPRHC
Trigger: ACAATGCCTGGGACATATTCAGTGACCAGTGAATAT...ATTAACCAGTCTACCTGCTTCCACTTTTCCTCCACCCTGATCACATACACACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344526.10
ENST00000502294.5
ENST00000509633.1
ENST00000634325.2
ENST00000634530.1
ENST00000635689.1
CDS-3UTR TCA 90 bp TCTGGCAATCACTGGAGAAGTATAGTGGTTGTTGCAGTTGATACCAGTGTGAAGATATTCACTGGTCACTaGATATGTCCCAGGCATTGT +
Preference number: 4 (lower is better)
Translates to: SGNHWRSIVVVAVDTSVKIFTGH*ICPRHC
Trigger: ACAATGCCTGGGACATATTCAGTGACCAGTGAATAT...CTTCACACTGGTATCAACTGCAACAACCACTATACTTCTCCAGTGATTGCCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
CDS-3UTR TCA 90 bp CATGAGGAGCATGGGGCAAGATGGAGAATGATAGGGAATGAAGTTAGAAAAGTCATATTCACTGGTCACTaGATATGTCCCAGGCATTGT +
Preference number: 4 (lower is better)
Translates to: HEEHGARWRMIGNEVRKVIFTGH*ICPRHC
Trigger: ACAATGCCTGGGACATATTCAGTGACCAGTGAATAT...GACTTTTCTAACTTCATTCCCTATCATTCTCCATCTTGCCCCATGCTCCTCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344526.10
ENST00000502294.5
ENST00000509633.1
ENST00000634325.2
ENST00000634530.1
ENST00000635689.1
CDS-3UTR TCA 90 bp AGGAATATTCAGAGATGGATGAAGTGGGTGACCATCGTCATTGTCATCCTCACCATCTTCTGGTTTGGATaGCTTTTCTGTGTCTCAAAG +
Preference number: 4 (lower is better)
Translates to: RNIQRWMKWVTIVIVILTIFWFG*LFCVSK
Trigger: CTTTGAGACACAGAAAAGTCATCCAAACCAGAAGAT...GGTGAGGATGACAATGACGATGGTCACCCACTTCATCCATCTCTGAATATTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509633.1
ENST00000635689.1
CDS-3UTR GCA 90 bp GGCAATCACTGGAGAAGTATAGTGGTTGTTGCAGTTGATACCAGTGTGAAGGTGAGAATTTCACTGATTTaGCTGTTCAAGAGAGGGAGA +
Preference number: 4 (lower is better)
Translates to: GNHWRSIVVVAVDTSVKVRISLI*LFKRGR
Trigger: TCTCCCTCTCTTGAACAGGCAAATCAGTGAAATTCT...CACCTTCACACTGGTATCAACTGCAACAACCACTATACTTCTCCAGTGATTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
CDS-3UTR GCA 90 bp ATCCAGGAGAAGTTAGAATCCAGGGATACGAAGGTAACCCTGTGTCAGTGTAAGAGAATTTCACTGATTTaGCTGTTCAAGAGAGGGAGA +
Preference number: 4 (lower is better)
Translates to: IQEKLESRDTKVTLCQCKRISLI*LFKRGR
Trigger: TCTCCCTCTCTTGAACAGGCAAATCAGTGAAATTCT...CTTACACTGACACAGGGTTACCTTCGTATCCCTGGATTCTAACTTCTCCTGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509633.1
ENST00000635689.1
CDS-3UTR CCA 90 bp TCTGGCAATCACTGGAGAAGTATAGTGGTTGTTGCAGTTGATACCAGTGTGAAGAGGAATATTCAGAGATaGATGAAGTGGGTGACCATC +
Preference number: 4 (lower is better)
Translates to: SGNHWRSIVVVAVDTSVKRNIQR*MKWVTI
Trigger: GATGGTCACCCACTTCATCCATCTCTGAATATTCCT...CTTCACACTGGTATCAACTGCAACAACCACTATACTTCTCCAGTGATTGCCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
CDS-3UTR CCA 90 bp ATGTGTGTATGTGATCAGGGTGGAGGAAAAGTGGAAGCAGGTAGACTGGTTAATAGGAATATTCAGAGATaGATGAAGTGGGTGACCATC +
Preference number: 4 (lower is better)
Translates to: MCVCDQGGGKVEAGRLVNRNIQR*MKWVTI
Trigger: GATGGTCACCCACTTCATCCATCTCTGAATATTCCT...ATTAACCAGTCTACCTGCTTCCACTTTTCCTCCACCCTGATCACATACACACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344526.10
ENST00000502294.5
ENST00000509633.1
ENST00000634325.2
ENST00000634530.1
ENST00000635689.1
CDS-3UTR CCA 90 bp CATGAGGAGCATGGGGCAAGATGGAGAATGATAGGGAATGAAGTTAGAAAAGTCAGGAATATTCAGAGATaGATGAAGTGGGTGACCATC +
Preference number: 4 (lower is better)
Translates to: HEEHGARWRMIGNEVRKVRNIQR*MKWVTI
Trigger: GATGGTCACCCACTTCATCCATCTCTGAATATTCCT...GACTTTTCTAACTTCATTCCCTATCATTCTCCATCTTGCCCCATGCTCCTCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344526.10
ENST00000502294.5
ENST00000509633.1
ENST00000634325.2
ENST00000634530.1
ENST00000635689.1
CDS-3UTR CCA 90 bp ATCCAGGAGAAGTTAGAATCCAGGGATACGAAGGTAACCCTGTGTCAGTGTAAGCTTGGCTCTAGAAGATaGAAGCAAACATCTCAAGTT +
Preference number: 4 (lower is better)
Translates to: IQEKLESRDTKVTLCQCKLGSRR*KQTSQV
Trigger: AACTTGAGATGTTTGCTTCCATCTTCTAGAGCCAAG...CTTACACTGACACAGGGTTACCTTCGTATCCCTGGATTCTAACTTCTCCTGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509633.1
ENST00000635689.1
CDS-3UTR CCA 90 bp CATGAGGAGCATGGGGCAAGATGGAGAATGATAGGGAATGAAGTTAGAAAAGTCCCATCTGGCAATCACTaGAGAAGTATAGTGGTTGTT +
Preference number: 4 (lower is better)
Translates to: HEEHGARWRMIGNEVRKVPSGNH*RSIVVV
Trigger: AACAACCACTATACTTCTCCAGTGATTGCCAGATGG...GACTTTTCTAACTTCATTCCCTATCATTCTCCATCTTGCCCCATGCTCCTCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
CDS-3UTR CCA 90 bp AGGAATATTCAGAGATGGATGAAGTGGGTGACCATCGTCATTGTCATCCTCACCGAGGTCCTGACTTTCTaGCCACAAAAGAAAGAAATA +
Preference number: 4 (lower is better)
Translates to: RNIQRWMKWVTIVIVILTEVLTF*PQKKEI
Trigger: TATTTCTTTCTTTTGTGGCCAGAAAGTCAGGACCTC...GGTGAGGATGACAATGACGATGGTCACCCACTTCATCCATCTCTGAATATTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509633.1
ENST00000635689.1
CDS-3UTR CCA 90 bp GGCAATCACTGGAGAAGTATAGTGGTTGTTGCAGTTGATACCAGTGTGAAGGTGGAGGTCCTGACTTTCTaGCCACAAAAGAAAGAAATA +
Preference number: 4 (lower is better)
Translates to: GNHWRSIVVVAVDTSVKVEVLTF*PQKKEI
Trigger: TATTTCTTTCTTTTGTGGCCAGAAAGTCAGGACCTC...CACCTTCACACTGGTATCAACTGCAACAACCACTATACTTCTCCAGTGATTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
CDS-3UTR TCA 90 bp GGTAAGTCTTGTGTCCTTGGAGAGGTGTTTAGAATATATTCCATTTTAAAAGAGTGTCATCCTCACCAATaGAGGGGAACCGTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: GKSCVLGEVFRIYSILKECHPHQ*RGTVSS
Trigger: GGAAGAGACGGTTCCCCTTCATTGGTGAGGATGACA...CTCTTTTAAAATGGAATATATTCTAAACACCTCTCCAAGGACACAAGACTTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000502294.5
ENST00000634325.2
ENST00000634530.1
CDS-3UTR TCA 90 bp ATGTGTGTATGTGATCAGGGTGGAGGAAAAGTGGAAGCAGGTAGACTGGTTAATTCTAGAGAATTTCACTaGTTTGCCTGTTCAAGAGAG +
Preference number: 4 (lower is better)
Translates to: MCVCDQGGGKVEAGRLVNSREFH*FACSRE
Trigger: CTCTCTTGAACAGGCAAATCAGTGAAATTCTCTAGA...ATTAACCAGTCTACCTGCTTCCACTTTTCCTCCACCCTGATCACATACACACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344526.10
ENST00000502294.5
ENST00000509633.1
ENST00000634325.2
ENST00000634530.1
ENST00000635689.1
CDS-3UTR TCA 90 bp ACTTTTCTGTGTCTCAAAGCTGATGCCTGTTTACTAACAACAGTTTGTTTTCCAGACTCCAGGCTAGGCTaGATGATTGCCATTTCAGTC +
Preference number: 4 (lower is better)
Translates to: TFLCLKADACLLTTVCFPDSRLG*MIAISV
Trigger: GACTGAAATGGCAATCATTCAGCCTAGCCTGGAGTC...TGGAAAACAAACTGTTGTTAGTAAACAGGCATCAGCTTTGAGACACAGAAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
CDS-3UTR TCA 90 bp ACTTTTCTGTGTCTCAAAGCTGATGCCTGTTTACTAACAACAGTTTGTTTTCCAGAAGTTGCAGTGAGCTaGGTTGGCACCATTGCACTA +
Preference number: 4 (lower is better)
Translates to: TFLCLKADACLLTTVCFPEVAVS*VGTIAL
Trigger: TAGTGCAATGGTGCCAACTCAGCTCACTGCAACTTC...TGGAAAACAAACTGTTGTTAGTAAACAGGCATCAGCTTTGAGACACAGAAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
CDS-3UTR TCA 90 bp ATGTGTGTATGTGATCAGGGTGGAGGAAAAGTGGAAGCAGGTAGACTGGTTAATTTTGTGGAGATAAGATaGGGGCAACAACAAAGACAA +
Preference number: 4 (lower is better)
Translates to: MCVCDQGGGKVEAGRLVNFVEIR*GQQQRQ
Trigger: TTGTCTTTGTTGTTGCCCTCATCTTATCTCCACAAA...ATTAACCAGTCTACCTGCTTCCACTTTTCCTCCACCCTGATCACATACACACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000344526.10
ENST00000502294.5
ENST00000509633.1
ENST00000634325.2
ENST00000634530.1
ENST00000635689.1
CDS-3UTR TCA 90 bp CATGAGGAGCATGGGGCAAGATGGAGAATGATAGGGAATGAAGTTAGAAAAGTCATCTTCTGGTTTGGATaGCTTTTCTGTGTCTCAAAG +
Preference number: 4 (lower is better)
Translates to: HEEHGARWRMIGNEVRKVIFWFG*LFCVSK
Trigger: CTTTGAGACACAGAAAAGTCATCCAAACCAGAAGAT...GACTTTTCTAACTTCATTCCCTATCATTCTCCATCTTGCCCCATGCTCCTCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
CDS-3UTR TCA 90 bp ATGTGTGTATGTGATCAGGGTGGAGGAAAAGTGGAAGCAGGTAGACTGGTTAATATCTTCTGGTTTGGATaGCTTTTCTGTGTCTCAAAG +
Preference number: 4 (lower is better)
Translates to: MCVCDQGGGKVEAGRLVNIFWFG*LFCVSK
Trigger: CTTTGAGACACAGAAAAGTCATCCAAACCAGAAGAT...ATTAACCAGTCTACCTGCTTCCACTTTTCCTCCACCCTGATCACATACACACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
CDS-3UTR TCA 90 bp CATGAGGAGCATGGGGCAAGATGGAGAATGATAGGGAATGAAGTTAGAAAAGTCCAGTTGATACCAGTGTaGAGGTGTGAACATTTCTTA +
Preference number: 4 (lower is better)
Translates to: HEEHGARWRMIGNEVRKVQLIPV*RCEHFL
Trigger: TAAGAAATGTTCACACCTTCACACTGGTATCAACTG...GACTTTTCTAACTTCATTCCCTATCATTCTCCATCTTGCCCCATGCTCCTCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
CDS-3UTR TCA 90 bp TCTGGCAATCACTGGAGAAGTATAGTGGTTGTTGCAGTTGATACCAGTGTGAAGCAGTTGATACCAGTGTaGAGGTGTGAACATTTCTTA +
Preference number: 4 (lower is better)
Translates to: SGNHWRSIVVVAVDTSVKQLIPV*RCEHFL
Trigger: TAAGAAATGTTCACACCTTCACACTGGTATCAACTG...CTTCACACTGGTATCAACTGCAACAACCACTATACTTCTCCAGTGATTGCCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
CDS-3UTR GCA 90 bp CATGAGGAGCATGGGGCAAGATGGAGAATGATAGGGAATGAAGTTAGAAAAGTCGAACCGTCTCTTCCTTaGAAAAGCAACACATACAAT +
Preference number: 4 (lower is better)
Translates to: HEEHGARWRMIGNEVRKVEPSLP*KSNTYN
Trigger: ATTGTATGTGTTGCTTTTGCAAGGAAGAGACGGTTC...GACTTTTCTAACTTCATTCCCTATCATTCTCCATCTTGCCCCATGCTCCTCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000502294.5
ENST00000634325.2
ENST00000634530.1
CDS-3UTR GCA 90 bp ATGTGTGTATGTGATCAGGGTGGAGGAAAAGTGGAAGCAGGTAGACTGGTTAATAGAATTTCACTGATTTaGCTGTTCAAGAGAGGGAGA +
Preference number: 4 (lower is better)
Translates to: MCVCDQGGGKVEAGRLVNRISLI*LFKRGR
Trigger: TCTCCCTCTCTTGAACAGGCAAATCAGTGAAATTCT...ATTAACCAGTCTACCTGCTTCCACTTTTCCTCCACCCTGATCACATACACACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344526.10
ENST00000502294.5
ENST00000509633.1
ENST00000634325.2
ENST00000634530.1
ENST00000635689.1
CDS-3UTR GCA 90 bp TCTGGCAATCACTGGAGAAGTATAGTGGTTGTTGCAGTTGATACCAGTGTGAAGAGAATTTCACTGATTTaGCTGTTCAAGAGAGGGAGA +
Preference number: 4 (lower is better)
Translates to: SGNHWRSIVVVAVDTSVKRISLI*LFKRGR
Trigger: TCTCCCTCTCTTGAACAGGCAAATCAGTGAAATTCT...CTTCACACTGGTATCAACTGCAACAACCACTATACTTCTCCAGTGATTGCCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
CDS-3UTR CCA 90 bp ATTTTCCAGTGGCTAAAGGGAACGCTATACAGTAAAGAATTATGTAAGATGGATGTTAATAGGCTATTCTaGCAGGGCACGGTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: IFQWLKGTLYSKELCKMDVNRLF*QGTVAH
Trigger: GTGAGCCACCGTGCCCTGCCAGAATAGCCTATTAAC...ATCCATCTTACATAATTCTTTACTGTATAGCGTTCCCTTTAGCCACTGGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
CDS-3UTR CCA 90 bp AGGAATATTCAGAGATGGATGAAGTGGGTGACCATCGTCATTGTCATCCTCACCGAGACCATGTCCTCATaGCTATACATAACAGTAATA +
Preference number: 4 (lower is better)
Translates to: RNIQRWMKWVTIVIVILTETMSS*LYITVI
Trigger: TATTACTGTTATGTATAGCCATGAGGACATGGTCTC...GGTGAGGATGACAATGACGATGGTCACCCACTTCATCCATCTCTGAATATTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509633.1
ENST00000635689.1
CDS-3UTR CCA 90 bp CATGAGGAGCATGGGGCAAGATGGAGAATGATAGGGAATGAAGTTAGAAAAGTCCTTGGCTCTAGAAGATaGAAGCAAACATCTCAAGTT +
Preference number: 4 (lower is better)
Translates to: HEEHGARWRMIGNEVRKVLGSRR*KQTSQV
Trigger: AACTTGAGATGTTTGCTTCCATCTTCTAGAGCCAAG...GACTTTTCTAACTTCATTCCCTATCATTCTCCATCTTGCCCCATGCTCCTCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344526.10
ENST00000502294.5
ENST00000509633.1
ENST00000634325.2
ENST00000634530.1
ENST00000635689.1
CDS-3UTR CCA 90 bp ATGTGTGTATGTGATCAGGGTGGAGGAAAAGTGGAAGCAGGTAGACTGGTTAATCTTGGCTCTAGAAGATaGAAGCAAACATCTCAAGTT +
Preference number: 4 (lower is better)
Translates to: MCVCDQGGGKVEAGRLVNLGSRR*KQTSQV
Trigger: AACTTGAGATGTTTGCTTCCATCTTCTAGAGCCAAG...ATTAACCAGTCTACCTGCTTCCACTTTTCCTCCACCCTGATCACATACACACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344526.10
ENST00000502294.5
ENST00000509633.1
ENST00000634325.2
ENST00000634530.1
ENST00000635689.1
CDS-3UTR CCA 90 bp ATGTGTGTATGTGATCAGGGTGGAGGAAAAGTGGAAGCAGGTAGACTGGTTAATGAGGTCCTGACTTTCTaGCCACAAAAGAAAGAAATA +
Preference number: 4 (lower is better)
Translates to: MCVCDQGGGKVEAGRLVNEVLTF*PQKKEI
Trigger: TATTTCTTTCTTTTGTGGCCAGAAAGTCAGGACCTC...ATTAACCAGTCTACCTGCTTCCACTTTTCCTCCACCCTGATCACATACACACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
CDS-3UTR CCA 90 bp ATTTTCCAGTGGCTAAAGGGAACGCTATACAGTAAAGAATTATGTAAGATGGATCCGTCTCTCCAGCAATaGCACTTCACAGCCATAGGA +
Preference number: 4 (lower is better)
Translates to: IFQWLKGTLYSKELCKMDPSLQQ*HFTAIG
Trigger: TCCTATGGCTGTGAAGTGCCATTGCTGGAGAGACGG...ATCCATCTTACATAATTCTTTACTGTATAGCGTTCCCTTTAGCCACTGGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509633.1
ENST00000635689.1
CDS-3UTR TCA 90 bp GGTAAGTCTTGTGTCCTTGGAGAGGTGTTTAGAATATATTCCATTTTAAAAGAGGAAGTTGCAGTGAGCTaGGTTGGCACCATTGCACTA +
Preference number: 4 (lower is better)
Translates to: GKSCVLGEVFRIYSILKEEVAVS*VGTIAL
Trigger: TAGTGCAATGGTGCCAACTCAGCTCACTGCAACTTC...CTCTTTTAAAATGGAATATATTCTAAACACCTCTCCAAGGACACAAGACTTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344526.10
ENST00000502294.5
ENST00000509633.1
ENST00000634325.2
ENST00000634530.1
ENST00000635689.1
CDS-3UTR TCA 90 bp ACTTTTCTGTGTCTCAAAGCTGATGCCTGTTTACTAACAACAGTTTGTTTTCCAAGTGGTTGTTGCAGTTaGTACCAGTGTGAAGGTGTG +
Preference number: 4 (lower is better)
Translates to: TFLCLKADACLLTTVCFPSGCCS*YQCEGV
Trigger: CACACCTTCACACTGGTATCAACTGCAACAACCACT...TGGAAAACAAACTGTTGTTAGTAAACAGGCATCAGCTTTGAGACACAGAAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
CDS-3UTR TCA 90 bp ACTTTTCTGTGTCTCAAAGCTGATGCCTGTTTACTAACAACAGTTTGTTTTCCAACCTCTTTGAGGTCCTaGCTTTCTGGCCACAAAAGA +
Preference number: 4 (lower is better)
Translates to: TFLCLKADACLLTTVCFPTSLRS*LSGHKR
Trigger: TCTTTTGTGGCCAGAAAGTCAGGACCTCAAAGAGGT...TGGAAAACAAACTGTTGTTAGTAAACAGGCATCAGCTTTGAGACACAGAAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
CDS-3UTR GCA 90 bp GGTAAGTCTTGTGTCCTTGGAGAGGTGTTTAGAATATATTCCATTTTAAAAGAGCCCTTGTTTCCAGGGTaGAAACTAGTGGATGCAGCT +
Preference number: 4 (lower is better)
Translates to: GKSCVLGEVFRIYSILKEPLFPG*KLVDAA
Trigger: AGCTGCATCCACTAGTTTGCACCCTGGAAACAAGGG...CTCTTTTAAAATGGAATATATTCTAAACACCTCTCCAAGGACACAAGACTTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502294.5
ENST00000634530.1
CDS-3UTR CCA 90 bp GGTAAGTCTTGTGTCCTTGGAGAGGTGTTTAGAATATATTCCATTTTAAAAGAGTATTCCCAGGGTAACTaGGGACTGTATTCACTGGGC +
Preference number: 4 (lower is better)
Translates to: GKSCVLGEVFRIYSILKEYSQGN*GLYSLG
Trigger: GCCCAGTGAATACAGTCCCCAGTTACCCTGGGAATA...CTCTTTTAAAATGGAATATATTCTAAACACCTCTCCAAGGACACAAGACTTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344526.10
ENST00000502294.5
ENST00000509633.1
ENST00000634325.2
ENST00000634530.1
ENST00000635689.1
CDS-3UTR CCA 90 bp ATTTTCCAGTGGCTAAAGGGAACGCTATACAGTAAAGAATTATGTAAGATGGATTATTCCCAGGGTAACTaGGGACTGTATTCACTGGGC +
Preference number: 4 (lower is better)
Translates to: IFQWLKGTLYSKELCKMDYSQGN*GLYSLG
Trigger: GCCCAGTGAATACAGTCCCCAGTTACCCTGGGAATA...ATCCATCTTACATAATTCTTTACTGTATAGCGTTCCCTTTAGCCACTGGAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
CDS-3UTR CCA 90 bp CATGAGGAGCATGGGGCAAGATGGAGAATGATAGGGAATGAAGTTAGAAAAGTCGAGACCATGTCCTCATaGCTATACATAACAGTAATA +
Preference number: 4 (lower is better)
Translates to: HEEHGARWRMIGNEVRKVETMSS*LYITVI
Trigger: TATTACTGTTATGTATAGCCATGAGGACATGGTCTC...GACTTTTCTAACTTCATTCCCTATCATTCTCCATCTTGCCCCATGCTCCTCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344526.10
ENST00000502294.5
ENST00000509633.1
ENST00000634325.2
ENST00000634530.1
ENST00000635689.1
CDS-3UTR CCA 90 bp CATGAGGAGCATGGGGCAAGATGGAGAATGATAGGGAATGAAGTTAGAAAAGTCTGTGAAATTTCCAGATaGTGGTGGTTACATGTATGT +
Preference number: 4 (lower is better)
Translates to: HEEHGARWRMIGNEVRKVCEISR*WWLHVC
Trigger: ACATACATGTAACCACCACCATCTGGAAATTTCACA...GACTTTTCTAACTTCATTCCCTATCATTCTCCATCTTGCCCCATGCTCCTCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
CDS-3UTR TCA 90 bp TTATCATCCTATAGTAGCTGTATAATCAGACTCCAGGCTAGGCTGAATGATTGCTCTAGAGAATTTCACTaGTTTGCCTGTTCAAGAGAG +
Preference number: 4 (lower is better)
Translates to: LSSYSSCIIRLQARLNDCSREFH*FACSRE
Trigger: CTCTCTTGAACAGGCAAATCAGTGAAATTCTCTAGA...GCAATCATTCAGCCTAGCCTGGAGTCTGATTATACAGCTACTATAGGATGATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512173.1
ENST00000634747.1
CDS-3UTR TCA 90 bp ACTTTTCTGTGTCTCAAAGCTGATGCCTGTTTACTAACAACAGTTTGTTTTCCAGCCCTGATAAAGTGCTaGATAAGACACAGAAATGCC +
Preference number: 4 (lower is better)
Translates to: TFLCLKADACLLTTVCFPALIKC*IRHRNA
Trigger: GGCATTTCTGTGTCTTATTCAGCACTTTATCAGGGC...TGGAAAACAAACTGTTGTTAGTAAACAGGCATCAGCTTTGAGACACAGAAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
CDS-3UTR TCA 90 bp GGTAAGTCTTGTGTCCTTGGAGAGGTGTTTAGAATATATTCCATTTTAAAAGAGACCTCTTTGAGGTCCTaGCTTTCTGGCCACAAAAGA +
Preference number: 4 (lower is better)
Translates to: GKSCVLGEVFRIYSILKETSLRS*LSGHKR
Trigger: TCTTTTGTGGCCAGAAAGTCAGGACCTCAAAGAGGT...CTCTTTTAAAATGGAATATATTCTAAACACCTCTCCAAGGACACAAGACTTACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
CDS-3UTR TCA 90 bp ACTTTTCTGTGTCTCAAAGCTGATGCCTGTTTACTAACAACAGTTTGTTTTCCAAAACTTATACCTCTTTaGGGTCCTGACTTTCTGGCC +
Preference number: 4 (lower is better)
Translates to: TFLCLKADACLLTTVCFPKLIPL*GPDFLA
Trigger: GGCCAGAAAGTCAGGACCTCAAAGAGGTATAAGTTT...TGGAAAACAAACTGTTGTTAGTAAACAGGCATCAGCTTTGAGACACAGAAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
CDS-3UTR TCA 90 bp TTATCATCCTATAGTAGCTGTATAATCAGACTCCAGGCTAGGCTGAATGATTGCATGCTCTTCACTGAATaGATCACAGTTGCATCAAAC +
Preference number: 4 (lower is better)
Translates to: LSSYSSCIIRLQARLNDCMLFTE*ITVASN
Trigger: GTTTGATGCAACTGTGATTCATTCAGTGAAGAGCAT...GCAATCATTCAGCCTAGCCTGGAGTCTGATTATACAGCTACTATAGGATGATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512173.1
ENST00000634747.1
CDS-3UTR GCA 90 bp ACTTTTCTGTGTCTCAAAGCTGATGCCTGTTTACTAACAACAGTTTGTTTTCCAAAGCAACACATACAATaGAGGCCCAAAGGAGAAGCT +
Preference number: 4 (lower is better)
Translates to: TFLCLKADACLLTTVCFPKQHIQ*RPKGEA
Trigger: AGCTTCTCCTTTGGGCCTGCATTGTATGTGTTGCTT...TGGAAAACAAACTGTTGTTAGTAAACAGGCATCAGCTTTGAGACACAGAAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
CDS-3UTR GCA 90 bp TTATCATCCTATAGTAGCTGTATAATCAGACTCCAGGCTAGGCTGAATGATTGCAGAATTTCACTGATTTaGCTGTTCAAGAGAGGGAGA +
Preference number: 4 (lower is better)
Translates to: LSSYSSCIIRLQARLNDCRISLI*LFKRGR
Trigger: TCTCCCTCTCTTGAACAGGCAAATCAGTGAAATTCT...GCAATCATTCAGCCTAGCCTGGAGTCTGATTATACAGCTACTATAGGATGATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512173.1
ENST00000634747.1
CDS-3UTR CCA 90 bp GGTAAGTCTTGTGTCCTTGGAGAGGTGTTTAGAATATATTCCATTTTAAAAGAGCAGAGATGGATGAAGTaGGTGACCATCGTCATTGTC +
Preference number: 4 (lower is better)
Translates to: GKSCVLGEVFRIYSILKEQRWMK*VTIVIV
Trigger: GACAATGACGATGGTCACCCACTTCATCCATCTCTG...CTCTTTTAAAATGGAATATATTCTAAACACCTCTCCAAGGACACAAGACTTACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344526.10
ENST00000502294.5
ENST00000509633.1
ENST00000634325.2
ENST00000634530.1
ENST00000635689.1
CDS-3UTR CCA 90 bp ATTTTCCAGTGGCTAAAGGGAACGCTATACAGTAAAGAATTATGTAAGATGGATGGGGACTGTATTCACTaGGCGATAATAAAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: IFQWLKGTLYSKELCKMDGDCIH*AIIKRR
Trigger: CCTCCTCTTTATTATCGCCCAGTGAATACAGTCCCC...ATCCATCTTACATAATTCTTTACTGTATAGCGTTCCCTTTAGCCACTGGAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
CDS-3UTR CCA 90 bp ACTTTTCTGTGTCTCAAAGCTGATGCCTGTTTACTAACAACAGTTTGTTTTCCAGAGCATGGGGCAAGATaGAGAATGATAGGGAATGAA +
Preference number: 4 (lower is better)
Translates to: TFLCLKADACLLTTVCFPEHGAR*RMIGNE
Trigger: TTCATTCCCTATCATTCTCCATCTTGCCCCATGCTC...TGGAAAACAAACTGTTGTTAGTAAACAGGCATCAGCTTTGAGACACAGAAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
CDS-3UTR CCA 90 bp CATGAGGAGCATGGGGCAAGATGGAGAATGATAGGGAATGAAGTTAGAAAAGTCATTTCCAGATGGTGGTaGTTACATGTATGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: HEEHGARWRMIGNEVRKVISRWW*LHVCFL
Trigger: AAGAAAACATACATGTAACCACCACCATCTGGAAAT...GACTTTTCTAACTTCATTCCCTATCATTCTCCATCTTGCCCCATGCTCCTCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
CDS-3UTR CCA 90 bp TCTGGCAATCACTGGAGAAGTATAGTGGTTGTTGCAGTTGATACCAGTGTGAAGATTTCCAGATGGTGGTaGTTACATGTATGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: SGNHWRSIVVVAVDTSVKISRWW*LHVCFL
Trigger: AAGAAAACATACATGTAACCACCACCATCTGGAAAT...CTTCACACTGGTATCAACTGCAACAACCACTATACTTCTCCAGTGATTGCCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
CDS-3UTR CCA 90 bp CATGAGGAGCATGGGGCAAGATGGAGAATGATAGGGAATGAAGTTAGAAAAGTCGAAATTTCCAGATGGTaGTGGTTACATGTATGTTTT +
Preference number: 4 (lower is better)
Translates to: HEEHGARWRMIGNEVRKVEISRW*WLHVCF
Trigger: AAAACATACATGTAACCACCACCATCTGGAAATTTC...GACTTTTCTAACTTCATTCCCTATCATTCTCCATCTTGCCCCATGCTCCTCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
CDS-3UTR CCA 90 bp TCTGGCAATCACTGGAGAAGTATAGTGGTTGTTGCAGTTGATACCAGTGTGAAGGAAATTTCCAGATGGTaGTGGTTACATGTATGTTTT +
Preference number: 4 (lower is better)
Translates to: SGNHWRSIVVVAVDTSVKEISRW*WLHVCF
Trigger: AAAACATACATGTAACCACCACCATCTGGAAATTTC...CTTCACACTGGTATCAACTGCAACAACCACTATACTTCTCCAGTGATTGCCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
CDS-3UTR TCA 90 bp ATTTTCCAGTGGCTAAAGGGAACGCTATACAGTAAAGAATTATGTAAGATGGATGGAGGAACATTCAACTaGGTAGCTAAGGGAAAACCA +
Preference number: 4 (lower is better)
Translates to: IFQWLKGTLYSKELCKMDGGTFN*VAKGKP
Trigger: TGGTTTTCCCTTAGCTACTCAGTTGAATGTTCCTCC...ATCCATCTTACATAATTCTTTACTGTATAGCGTTCCCTTTAGCCACTGGAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
CDS-3UTR TCA 90 bp GGTAAGTCTTGTGTCCTTGGAGAGGTGTTTAGAATATATTCCATTTTAAAAGAGGGAGGAACATTCAACTaGGTAGCTAAGGGAAAACCA +
Preference number: 4 (lower is better)
Translates to: GKSCVLGEVFRIYSILKEGGTFN*VAKGKP
Trigger: TGGTTTTCCCTTAGCTACTCAGTTGAATGTTCCTCC...CTCTTTTAAAATGGAATATATTCTAAACACCTCTCCAAGGACACAAGACTTACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000344526.10
ENST00000502294.5
ENST00000509633.1
ENST00000634325.2
ENST00000634530.1
ENST00000635689.1
CDS-3UTR TCA 90 bp GGTAAGTCTTGTGTCCTTGGAGAGGTGTTTAGAATATATTCCATTTTAAAAGAGGCCCTGATAAAGTGCTaGATAAGACACAGAAATGCC +
Preference number: 4 (lower is better)
Translates to: GKSCVLGEVFRIYSILKEALIKC*IRHRNA
Trigger: GGCATTTCTGTGTCTTATTCAGCACTTTATCAGGGC...CTCTTTTAAAATGGAATATATTCTAAACACCTCTCCAAGGACACAAGACTTACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344526.10
ENST00000502294.5
ENST00000509633.1
ENST00000634325.2
ENST00000634530.1
ENST00000635689.1
CDS-3UTR TCA 90 bp ACTTTTCTGTGTCTCAAAGCTGATGCCTGTTTACTAACAACAGTTTGTTTTCCAATATTCACTGGTCACTaGATATGTCCCAGGCATTGT +
Preference number: 4 (lower is better)
Translates to: TFLCLKADACLLTTVCFPIFTGH*ICPRHC
Trigger: ACAATGCCTGGGACATATTCAGTGACCAGTGAATAT...TGGAAAACAAACTGTTGTTAGTAAACAGGCATCAGCTTTGAGACACAGAAAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
CDS-3UTR TCA 90 bp GGTAAGTCTTGTGTCCTTGGAGAGGTGTTTAGAATATATTCCATTTTAAAAGAGAAGCTTCATTTTGATTaGCCCTTGTTTCCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: GKSCVLGEVFRIYSILKEKLHFD*PLFPGC
Trigger: GCACCCTGGAAACAAGGGTCAATCAAAATGAAGCTT...CTCTTTTAAAATGGAATATATTCTAAACACCTCTCCAAGGACACAAGACTTACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000502294.5
ENST00000634530.1
CDS-3UTR TCA 90 bp TTATCATCCTATAGTAGCTGTATAATCAGACTCCAGGCTAGGCTGAATGATTGCTTAAATGCTCTTCACTaGATGAATCACAGTTGCATC +
Preference number: 4 (lower is better)
Translates to: LSSYSSCIIRLQARLNDCLNALH*MNHSCI
Trigger: GATGCAACTGTGATTCATTCAGTGAAGAGCATTTAA...GCAATCATTCAGCCTAGCCTGGAGTCTGATTATACAGCTACTATAGGATGATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512173.1
ENST00000634747.1
CDS-3UTR CCA 90 bp GGTAAGTCTTGTGTCCTTGGAGAGGTGTTTAGAATATATTCCATTTTAAAAGAGGAGCATGGGGCAAGATaGAGAATGATAGGGAATGAA +
Preference number: 4 (lower is better)
Translates to: GKSCVLGEVFRIYSILKEEHGAR*RMIGNE
Trigger: TTCATTCCCTATCATTCTCCATCTTGCCCCATGCTC...CTCTTTTAAAATGGAATATATTCTAAACACCTCTCCAAGGACACAAGACTTACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000344526.10
ENST00000502294.5
ENST00000509633.1
ENST00000634325.2
ENST00000634530.1
ENST00000635689.1
CDS-3UTR CCA 90 bp ACTTTTCTGTGTCTCAAAGCTGATGCCTGTTTACTAACAACAGTTTGTTTTCCACCATCTGGCAATCACTaGAGAAGTATAGTGGTTGTT +
Preference number: 4 (lower is better)
Translates to: TFLCLKADACLLTTVCFPPSGNH*RSIVVV
Trigger: AACAACCACTATACTTCTCCAGTGATTGCCAGATGG...TGGAAAACAAACTGTTGTTAGTAAACAGGCATCAGCTTTGAGACACAGAAAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
CDS-3UTR TCA 90 bp GGTAAGTCTTGTGTCCTTGGAGAGGTGTTTAGAATATATTCCATTTTAAAAGAGATATTCACTGGTCACTaGATATGTCCCAGGCATTGT +
Preference number: 4 (lower is better)
Translates to: GKSCVLGEVFRIYSILKEIFTGH*ICPRHC
Trigger: ACAATGCCTGGGACATATTCAGTGACCAGTGAATAT...CTCTTTTAAAATGGAATATATTCTAAACACCTCTCCAAGGACACAAGACTTACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344526.10
ENST00000502294.5
ENST00000509633.1
ENST00000634325.2
ENST00000634530.1
ENST00000635689.1
CDS-3UTR TCA 90 bp ATTTTCCAGTGGCTAAAGGGAACGCTATACAGTAAAGAATTATGTAAGATGGATTCTGTGTCTCAAAGCTaGTGCCTGTTTACTAACAAC +
Preference number: 4 (lower is better)
Translates to: IFQWLKGTLYSKELCKMDSVSQS*CLFTNN
Trigger: GTTGTTAGTAAACAGGCATCAGCTTTGAGACACAGA...ATCCATCTTACATAATTCTTTACTGTATAGCGTTCCCTTTAGCCACTGGAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
CDS-3UTR CCA 90 bp GGTAAGTCTTGTGTCCTTGGAGAGGTGTTTAGAATATATTCCATTTTAAAAGAGAGGAATATTCAGAGATaGATGAAGTGGGTGACCATC +
Preference number: 4 (lower is better)
Translates to: GKSCVLGEVFRIYSILKERNIQR*MKWVTI
Trigger: GATGGTCACCCACTTCATCCATCTCTGAATATTCCT...CTCTTTTAAAATGGAATATATTCTAAACACCTCTCCAAGGACACAAGACTTACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344526.10
ENST00000502294.5
ENST00000509633.1
ENST00000634325.2
ENST00000634530.1
ENST00000635689.1
CDS-3UTR CCA 90 bp ACTTTTCTGTGTCTCAAAGCTGATGCCTGTTTACTAACAACAGTTTGTTTTCCACTTGGCTCTAGAAGATaGAAGCAAACATCTCAAGTT +
Preference number: 4 (lower is better)
Translates to: TFLCLKADACLLTTVCFPLGSRR*KQTSQV
Trigger: AACTTGAGATGTTTGCTTCCATCTTCTAGAGCCAAG...TGGAAAACAAACTGTTGTTAGTAAACAGGCATCAGCTTTGAGACACAGAAAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
CDS-3UTR CCA 90 bp ATTTTCCAGTGGCTAAAGGGAACGCTATACAGTAAAGAATTATGTAAGATGGATCCATCTGGCAATCACTaGAGAAGTATAGTGGTTGTT +
Preference number: 4 (lower is better)
Translates to: IFQWLKGTLYSKELCKMDPSGNH*RSIVVV
Trigger: AACAACCACTATACTTCTCCAGTGATTGCCAGATGG...ATCCATCTTACATAATTCTTTACTGTATAGCGTTCCCTTTAGCCACTGGAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
CDS-3UTR TCA 90 bp GGTAAGTCTTGTGTCCTTGGAGAGGTGTTTAGAATATATTCCATTTTAAAAGAGTCTAGAGAATTTCACTaGTTTGCCTGTTCAAGAGAG +
Preference number: 4 (lower is better)
Translates to: GKSCVLGEVFRIYSILKESREFH*FACSRE
Trigger: CTCTCTTGAACAGGCAAATCAGTGAAATTCTCTAGA...CTCTTTTAAAATGGAATATATTCTAAACACCTCTCCAAGGACACAAGACTTACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344526.10
ENST00000502294.5
ENST00000509633.1
ENST00000634325.2
ENST00000634530.1
ENST00000635689.1
CDS-3UTR TCA 90 bp ATTTTCCAGTGGCTAAAGGGAACGCTATACAGTAAAGAATTATGTAAGATGGATTTTGTGGAGATAAGATaGGGGCAACAACAAAGACAA +
Preference number: 4 (lower is better)
Translates to: IFQWLKGTLYSKELCKMDFVEIR*GQQQRQ
Trigger: TTGTCTTTGTTGTTGCCCTCATCTTATCTCCACAAA...ATCCATCTTACATAATTCTTTACTGTATAGCGTTCCCTTTAGCCACTGGAAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
CDS-3UTR TCA 90 bp GGTAAGTCTTGTGTCCTTGGAGAGGTGTTTAGAATATATTCCATTTTAAAAGAGTTTGTGGAGATAAGATaGGGGCAACAACAAAGACAA +
Preference number: 4 (lower is better)
Translates to: GKSCVLGEVFRIYSILKEFVEIR*GQQQRQ
Trigger: TTGTCTTTGTTGTTGCCCTCATCTTATCTCCACAAA...CTCTTTTAAAATGGAATATATTCTAAACACCTCTCCAAGGACACAAGACTTACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000344526.10
ENST00000502294.5
ENST00000509633.1
ENST00000634325.2
ENST00000634530.1
ENST00000635689.1
CDS-3UTR TCA 90 bp GGTAAGTCTTGTGTCCTTGGAGAGGTGTTTAGAATATATTCCATTTTAAAAGAGATCTTCTGGTTTGGATaGCTTTTCTGTGTCTCAAAG +
Preference number: 4 (lower is better)
Translates to: GKSCVLGEVFRIYSILKEIFWFG*LFCVSK
Trigger: CTTTGAGACACAGAAAAGTCATCCAAACCAGAAGAT...CTCTTTTAAAATGGAATATATTCTAAACACCTCTCCAAGGACACAAGACTTACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
CDS-3UTR TCA 90 bp GGTAAGTCTTGTGTCCTTGGAGAGGTGTTTAGAATATATTCCATTTTAAAAGAGCAGTTGATACCAGTGTaGAGGTGTGAACATTTCTTA +
Preference number: 4 (lower is better)
Translates to: GKSCVLGEVFRIYSILKEQLIPV*RCEHFL
Trigger: TAAGAAATGTTCACACCTTCACACTGGTATCAACTG...CTCTTTTAAAATGGAATATATTCTAAACACCTCTCCAAGGACACAAGACTTACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
CDS-3UTR GCA 90 bp GGTAAGTCTTGTGTCCTTGGAGAGGTGTTTAGAATATATTCCATTTTAAAAGAGAGAATTTCACTGATTTaGCTGTTCAAGAGAGGGAGA +
Preference number: 4 (lower is better)
Translates to: GKSCVLGEVFRIYSILKERISLI*LFKRGR
Trigger: TCTCCCTCTCTTGAACAGGCAAATCAGTGAAATTCT...CTCTTTTAAAATGGAATATATTCTAAACACCTCTCCAAGGACACAAGACTTACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344526.10
ENST00000502294.5
ENST00000509633.1
ENST00000634325.2
ENST00000634530.1
ENST00000635689.1
CDS-3UTR CCA 90 bp ACTTTTCTGTGTCTCAAAGCTGATGCCTGTTTACTAACAACAGTTTGTTTTCCAGAGACCATGTCCTCATaGCTATACATAACAGTAATA +
Preference number: 4 (lower is better)
Translates to: TFLCLKADACLLTTVCFPETMSS*LYITVI
Trigger: TATTACTGTTATGTATAGCCATGAGGACATGGTCTC...TGGAAAACAAACTGTTGTTAGTAAACAGGCATCAGCTTTGAGACACAGAAAAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
CDS-3UTR CCA 90 bp GGTAAGTCTTGTGTCCTTGGAGAGGTGTTTAGAATATATTCCATTTTAAAAGAGGAGACCATGTCCTCATaGCTATACATAACAGTAATA +
Preference number: 4 (lower is better)
Translates to: GKSCVLGEVFRIYSILKEETMSS*LYITVI
Trigger: TATTACTGTTATGTATAGCCATGAGGACATGGTCTC...CTCTTTTAAAATGGAATATATTCTAAACACCTCTCCAAGGACACAAGACTTACC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344526.10
ENST00000502294.5
ENST00000509633.1
ENST00000634325.2
ENST00000634530.1
ENST00000635689.1
CDS-3UTR CCA 90 bp ATTTTCCAGTGGCTAAAGGGAACGCTATACAGTAAAGAATTATGTAAGATGGATGAGACCATGTCCTCATaGCTATACATAACAGTAATA +
Preference number: 4 (lower is better)
Translates to: IFQWLKGTLYSKELCKMDETMSS*LYITVI
Trigger: TATTACTGTTATGTATAGCCATGAGGACATGGTCTC...ATCCATCTTACATAATTCTTTACTGTATAGCGTTCCCTTTAGCCACTGGAAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
CDS-3UTR CCA 90 bp ACTTTTCTGTGTCTCAAAGCTGATGCCTGTTTACTAACAACAGTTTGTTTTCCAGAAATTTCCAGATGGTaGTGGTTACATGTATGTTTT +
Preference number: 4 (lower is better)
Translates to: TFLCLKADACLLTTVCFPEISRW*WLHVCF
Trigger: AAAACATACATGTAACCACCACCATCTGGAAATTTC...TGGAAAACAAACTGTTGTTAGTAAACAGGCATCAGCTTTGAGACACAGAAAAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
CDS-3UTR CCA 90 bp GGTAAGTCTTGTGTCCTTGGAGAGGTGTTTAGAATATATTCCATTTTAAAAGAGTGTGAAATTTCCAGATaGTGGTGGTTACATGTATGT +
Preference number: 4 (lower is better)
Translates to: GKSCVLGEVFRIYSILKECEISR*WWLHVC
Trigger: ACATACATGTAACCACCACCATCTGGAAATTTCACA...CTCTTTTAAAATGGAATATATTCTAAACACCTCTCCAAGGACACAAGACTTACC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
CDS-3UTR CCA 90 bp GGTAAGTCTTGTGTCCTTGGAGAGGTGTTTAGAATATATTCCATTTTAAAAGAGATTTCCAGATGGTGGTaGTTACATGTATGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: GKSCVLGEVFRIYSILKEISRWW*LHVCFL
Trigger: AAGAAAACATACATGTAACCACCACCATCTGGAAAT...CTCTTTTAAAATGGAATATATTCTAAACACCTCTCCAAGGACACAAGACTTACC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
CDS-3UTR CCA 90 bp GGTAAGTCTTGTGTCCTTGGAGAGGTGTTTAGAATATATTCCATTTTAAAAGAGGAAATTTCCAGATGGTaGTGGTTACATGTATGTTTT +
Preference number: 4 (lower is better)
Translates to: GKSCVLGEVFRIYSILKEEISRW*WLHVCF
Trigger: AAAACATACATGTAACCACCACCATCTGGAAATTTC...CTCTTTTAAAATGGAATATATTCTAAACACCTCTCCAAGGACACAAGACTTACC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
CDS-3UTR CAA 90 bp ATGTGTGTATGTGATCAGGGTGGAGGAAAAGTGGAAGCAGGTAGACTGGTTAATATGCAGCTCTTGGTCTaGACGTGGACAATGTGCCTC +
Preference number: 5 (lower is better)
Translates to: MCVCDQGGGKVEAGRLVNMQLLV*TWTMCL
Trigger: GAGGCACATTGTCCACGTCAAGACCAAGAGCTGCAT...ATTAACCAGTCTACCTGCTTCCACTTTTCCTCCACCCTGATCACATACACACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502294.5
ENST00000634530.1
CDS-3UTR CAA 90 bp TCTGGCAATCACTGGAGAAGTATAGTGGTTGTTGCAGTTGATACCAGTGTGAAGGAGAATTTCACTGATTaGCCTGTTCAAGAGAGGGAG +
Preference number: 5 (lower is better)
Translates to: SGNHWRSIVVVAVDTSVKENFTD*PVQERE
Trigger: CTCCCTCTCTTGAACAGGCAAATCAGTGAAATTCTC...CTTCACACTGGTATCAACTGCAACAACCACTATACTTCTCCAGTGATTGCCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
CDS-3UTR CAA 90 bp CATGAGGAGCATGGGGCAAGATGGAGAATGATAGGGAATGAAGTTAGAAAAGTCGAGAATTTCACTGATTaGCCTGTTCAAGAGAGGGAG +
Preference number: 5 (lower is better)
Translates to: HEEHGARWRMIGNEVRKVENFTD*PVQERE
Trigger: CTCCCTCTCTTGAACAGGCAAATCAGTGAAATTCTC...GACTTTTCTAACTTCATTCCCTATCATTCTCCATCTTGCCCCATGCTCCTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344526.10
ENST00000502294.5
ENST00000509633.1
ENST00000634325.2
ENST00000634530.1
ENST00000635689.1
CDS-3UTR CAA 90 bp ATGTGTGTATGTGATCAGGGTGGAGGAAAAGTGGAAGCAGGTAGACTGGTTAATGAGAATTTCACTGATTaGCCTGTTCAAGAGAGGGAG +
Preference number: 5 (lower is better)
Translates to: MCVCDQGGGKVEAGRLVNENFTD*PVQERE
Trigger: CTCCCTCTCTTGAACAGGCAAATCAGTGAAATTCTC...ATTAACCAGTCTACCTGCTTCCACTTTTCCTCCACCCTGATCACATACACACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344526.10
ENST00000502294.5
ENST00000509633.1
ENST00000634325.2
ENST00000634530.1
ENST00000635689.1
CDS-3UTR CAA 90 bp CATGAGGAGCATGGGGCAAGATGGAGAATGATAGGGAATGAAGTTAGAAAAGTCAAAGTTAGATCCTACTaGGCTCTAGAAGATGGAAGC +
Preference number: 5 (lower is better)
Translates to: HEEHGARWRMIGNEVRKVKVRSY*ALEDGS
Trigger: GCTTCCATCTTCTAGAGCCAAGTAGGATCTAACTTT...GACTTTTCTAACTTCATTCCCTATCATTCTCCATCTTGCCCCATGCTCCTCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344526.10
ENST00000502294.5
ENST00000509633.1
ENST00000634325.2
ENST00000634530.1
ENST00000635689.1
CDS-3UTR CAA 90 bp TCTGGCAATCACTGGAGAAGTATAGTGGTTGTTGCAGTTGATACCAGTGTGAAGAAAGTTAGATCCTACTaGGCTCTAGAAGATGGAAGC +
Preference number: 5 (lower is better)
Translates to: SGNHWRSIVVVAVDTSVKKVRSY*ALEDGS
Trigger: GCTTCCATCTTCTAGAGCCAAGTAGGATCTAACTTT...CTTCACACTGGTATCAACTGCAACAACCACTATACTTCTCCAGTGATTGCCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
CDS-3UTR CAA 90 bp ATGTGTGTATGTGATCAGGGTGGAGGAAAAGTGGAAGCAGGTAGACTGGTTAATAGGAGAAGCTTCATTTaGATTGACCCTTGTTTCCAG +
Preference number: 5 (lower is better)
Translates to: MCVCDQGGGKVEAGRLVNRRSFI*IDPCFQ
Trigger: CTGGAAACAAGGGTCAATCAAAATGAAGCTTCTCCT...ATTAACCAGTCTACCTGCTTCCACTTTTCCTCCACCCTGATCACATACACACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502294.5
ENST00000634530.1
CDS-3UTR CAA 90 bp ATGTGTGTATGTGATCAGGGTGGAGGAAAAGTGGAAGCAGGTAGACTGGTTAATGTAAGTCTTGTGTCCTaGGAGAGGTGTTTAGAATAT +
Preference number: 5 (lower is better)
Translates to: MCVCDQGGGKVEAGRLVNVSLVS*ERCLEY
Trigger: ATATTCTAAACACCTCTCCAAGGACACAAGACTTAC...ATTAACCAGTCTACCTGCTTCCACTTTTCCTCCACCCTGATCACATACACACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344526.10
ENST00000502294.5
ENST00000509633.1
ENST00000634325.2
ENST00000634530.1
ENST00000635689.1
CDS-3UTR CAA 90 bp ATGTGTGTATGTGATCAGGGTGGAGGAAAAGTGGAAGCAGGTAGACTGGTTAATACAAAAAGCACTGGGTaGCAGAAGAGGGATTTATTT +
Preference number: 5 (lower is better)
Translates to: MCVCDQGGGKVEAGRLVNTKSTG*QKRDLF
Trigger: AAATAAATCCCTCTTCTGCAACCCAGTGCTTTTTGT...ATTAACCAGTCTACCTGCTTCCACTTTTCCTCCACCCTGATCACATACACACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000344526.10
ENST00000502294.5
ENST00000509633.1
ENST00000634325.2
ENST00000634530.1
ENST00000635689.1
CDS-3UTR CAA 90 bp CATGAGGAGCATGGGGCAAGATGGAGAATGATAGGGAATGAAGTTAGAAAAGTCACAAAAAGCACTGGGTaGCAGAAGAGGGATTTATTT +
Preference number: 5 (lower is better)
Translates to: HEEHGARWRMIGNEVRKVTKSTG*QKRDLF
Trigger: AAATAAATCCCTCTTCTGCAACCCAGTGCTTTTTGT...GACTTTTCTAACTTCATTCCCTATCATTCTCCATCTTGCCCCATGCTCCTCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000344526.10
ENST00000502294.5
ENST00000509633.1
ENST00000634325.2
ENST00000634530.1
ENST00000635689.1
CDS-3UTR CAA 90 bp TCTGGCAATCACTGGAGAAGTATAGTGGTTGTTGCAGTTGATACCAGTGTGAAGACAAAAAGCACTGGGTaGCAGAAGAGGGATTTATTT +
Preference number: 5 (lower is better)
Translates to: SGNHWRSIVVVAVDTSVKTKSTG*QKRDLF
Trigger: AAATAAATCCCTCTTCTGCAACCCAGTGCTTTTTGT...CTTCACACTGGTATCAACTGCAACAACCACTATACTTCTCCAGTGATTGCCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
CDS-3UTR CAA 90 bp ATGTGTGTATGTGATCAGGGTGGAGGAAAAGTGGAAGCAGGTAGACTGGTTAATAAAGTTTCTCATTTTTaGAGACCATGTCCTCATGGC +
Preference number: 5 (lower is better)
Translates to: MCVCDQGGGKVEAGRLVNKVSHF*RPCPHG
Trigger: GCCATGAGGACATGGTCTCAAAAAATGAGAAACTTT...ATTAACCAGTCTACCTGCTTCCACTTTTCCTCCACCCTGATCACATACACACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000344526.10
ENST00000502294.5
ENST00000509633.1
ENST00000634325.2
ENST00000634530.1
ENST00000635689.1
CDS-3UTR CAA 90 bp CATGAGGAGCATGGGGCAAGATGGAGAATGATAGGGAATGAAGTTAGAAAAGTCAAAGTTTCTCATTTTTaGAGACCATGTCCTCATGGC +
Preference number: 5 (lower is better)
Translates to: HEEHGARWRMIGNEVRKVKVSHF*RPCPHG
Trigger: GCCATGAGGACATGGTCTCAAAAAATGAGAAACTTT...GACTTTTCTAACTTCATTCCCTATCATTCTCCATCTTGCCCCATGCTCCTCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000344526.10
ENST00000502294.5
ENST00000509633.1
ENST00000634325.2
ENST00000634530.1
ENST00000635689.1
CDS-3UTR CAA 90 bp ATGTGTGTATGTGATCAGGGTGGAGGAAAAGTGGAAGCAGGTAGACTGGTTAATATCCAGCATTCTTCCTaGCAAAAGCAACACATACAA +
Preference number: 5 (lower is better)
Translates to: MCVCDQGGGKVEAGRLVNIQHSS*QKQHIQ
Trigger: TTGTATGTGTTGCTTTTGCAAGGAAGAATGCTGGAT...ATTAACCAGTCTACCTGCTTCCACTTTTCCTCCACCCTGATCACATACACACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000509633.1
ENST00000635689.1
CDS-3UTR CAA 90 bp CATGAGGAGCATGGGGCAAGATGGAGAATGATAGGGAATGAAGTTAGAAAAGTCATCCAGCATTCTTCCTaGCAAAAGCAACACATACAA +
Preference number: 5 (lower is better)
Translates to: HEEHGARWRMIGNEVRKVIQHSS*QKQHIQ
Trigger: TTGTATGTGTTGCTTTTGCAAGGAAGAATGCTGGAT...GACTTTTCTAACTTCATTCCCTATCATTCTCCATCTTGCCCCATGCTCCTCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000509633.1
ENST00000635689.1
CDS-3UTR CAA 90 bp ATGTGTGTATGTGATCAGGGTGGAGGAAAAGTGGAAGCAGGTAGACTGGTTAATAGACTTTGTAGCCTCTaGATATTTCTATTTCGGTTC +
Preference number: 5 (lower is better)
Translates to: MCVCDQGGGKVEAGRLVNRLCSL*IFLFRF
Trigger: GAACCGAAATAGAAATATCAAGAGGCTACAAAGTCT...ATTAACCAGTCTACCTGCTTCCACTTTTCCTCCACCCTGATCACATACACACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344526.10
ENST00000502294.5
ENST00000509633.1
ENST00000634325.2
ENST00000634530.1
ENST00000635689.1
CDS-3UTR CAA 90 bp ACTTTTCTGTGTCTCAAAGCTGATGCCTGTTTACTAACAACAGTTTGTTTTCCAGGAACCGTCTCTTCCTaGCAAAAGCAACACATACAA +
Preference number: 5 (lower is better)
Translates to: TFLCLKADACLLTTVCFPGTVSS*QKQHIQ
Trigger: TTGTATGTGTTGCTTTTGCAAGGAAGAGACGGTTCC...TGGAAAACAAACTGTTGTTAGTAAACAGGCATCAGCTTTGAGACACAGAAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344526.10
ENST00000634325.2
CDS-3UTR CAA 90 bp GGTAAGTCTTGTGTCCTTGGAGAGGTGTTTAGAATATATTCCATTTTAAAAGAGGGAACCGTCTCTTCCTaGCAAAAGCAACACATACAA +
Preference number: 5 (lower is better)
Translates to: GKSCVLGEVFRIYSILKEGTVSS*QKQHIQ
Trigger: TTGTATGTGTTGCTTTTGCAAGGAAGAGACGGTTCC...CTCTTTTAAAATGGAATATATTCTAAACACCTCTCCAAGGACACAAGACTTACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000502294.5
ENST00000634325.2
ENST00000634530.1
CDS-3UTR CAA 90 bp ACTTTTCTGTGTCTCAAAGCTGATGCCTGTTTACTAACAACAGTTTGTTTTCCAAAAGTTAGATCCTACTaGGCTCTAGAAGATGGAAGC +
Preference number: 5 (lower is better)
Translates to: TFLCLKADACLLTTVCFPKVRSY*ALEDGS
Trigger: GCTTCCATCTTCTAGAGCCAAGTAGGATCTAACTTT...TGGAAAACAAACTGTTGTTAGTAAACAGGCATCAGCTTTGAGACACAGAAAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
CDS-3UTR CAA 90 bp ACTTTTCTGTGTCTCAAAGCTGATGCCTGTTTACTAACAACAGTTTGTTTTCCAACAAAAAGCACTGGGTaGCAGAAGAGGGATTTATTT +
Preference number: 5 (lower is better)
Translates to: TFLCLKADACLLTTVCFPTKSTG*QKRDLF
Trigger: AAATAAATCCCTCTTCTGCAACCCAGTGCTTTTTGT...TGGAAAACAAACTGTTGTTAGTAAACAGGCATCAGCTTTGAGACACAGAAAAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
CDS-3UTR CAA 90 bp ACTTTTCTGTGTCTCAAAGCTGATGCCTGTTTACTAACAACAGTTTGTTTTCCAAAAGTTTCTCATTTTTaGAGACCATGTCCTCATGGC +
Preference number: 5 (lower is better)
Translates to: TFLCLKADACLLTTVCFPKVSHF*RPCPHG
Trigger: GCCATGAGGACATGGTCTCAAAAAATGAGAAACTTT...TGGAAAACAAACTGTTGTTAGTAAACAGGCATCAGCTTTGAGACACAGAAAAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
CDS-3UTR CAA 90 bp GGTAAGTCTTGTGTCCTTGGAGAGGTGTTTAGAATATATTCCATTTTAAAAGAGAAAGTTAGATCCTACTaGGCTCTAGAAGATGGAAGC +
Preference number: 5 (lower is better)
Translates to: GKSCVLGEVFRIYSILKEKVRSY*ALEDGS
Trigger: GCTTCCATCTTCTAGAGCCAAGTAGGATCTAACTTT...CTCTTTTAAAATGGAATATATTCTAAACACCTCTCCAAGGACACAAGACTTACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344526.10
ENST00000502294.5
ENST00000509633.1
ENST00000634325.2
ENST00000634530.1
ENST00000635689.1
CDS-3UTR CAA 90 bp GGTAAGTCTTGTGTCCTTGGAGAGGTGTTTAGAATATATTCCATTTTAAAAGAGAGGAGAAGCTTCATTTaGATTGACCCTTGTTTCCAG +
Preference number: 5 (lower is better)
Translates to: GKSCVLGEVFRIYSILKERRSFI*IDPCFQ
Trigger: CTGGAAACAAGGGTCAATCAAAATGAAGCTTCTCCT...CTCTTTTAAAATGGAATATATTCTAAACACCTCTCCAAGGACACAAGACTTACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502294.5
ENST00000634530.1
CDS-3UTR CAA 90 bp GGTAAGTCTTGTGTCCTTGGAGAGGTGTTTAGAATATATTCCATTTTAAAAGAGAAAGTTTCTCATTTTTaGAGACCATGTCCTCATGGC +
Preference number: 5 (lower is better)
Translates to: GKSCVLGEVFRIYSILKEKVSHF*RPCPHG
Trigger: GCCATGAGGACATGGTCTCAAAAAATGAGAAACTTT...CTCTTTTAAAATGGAATATATTCTAAACACCTCTCCAAGGACACAAGACTTACC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000344526.10
ENST00000502294.5
ENST00000509633.1
ENST00000634325.2
ENST00000634530.1
ENST00000635689.1
CDS-3UTR CAA 90 bp ATTTTCCAGTGGCTAAAGGGAACGCTATACAGTAAAGAATTATGTAAGATGGATAAAGTTTCTCATTTTTaGAGACCATGTCCTCATGGC +
Preference number: 5 (lower is better)
Translates to: IFQWLKGTLYSKELCKMDKVSHF*RPCPHG
Trigger: GCCATGAGGACATGGTCTCAAAAAATGAGAAACTTT...ATCCATCTTACATAATTCTTTACTGTATAGCGTTCCCTTTAGCCACTGGAAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
CDS-3UTR CAA 90 bp ACTTTTCTGTGTCTCAAAGCTGATGCCTGTTTACTAACAACAGTTTGTTTTCCAAGACTTTGTAGCCTCTaGATATTTCTATTTCGGTTC +
Preference number: 5 (lower is better)
Translates to: TFLCLKADACLLTTVCFPRLCSL*IFLFRF
Trigger: GAACCGAAATAGAAATATCAAGAGGCTACAAAGTCT...TGGAAAACAAACTGTTGTTAGTAAACAGGCATCAGCTTTGAGACACAGAAAAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344526.10
ENST00000509633.1
ENST00000634325.2
ENST00000635689.1
CDS-3UTR CAA 90 bp GGTAAGTCTTGTGTCCTTGGAGAGGTGTTTAGAATATATTCCATTTTAAAAGAGAGACTTTGTAGCCTCTaGATATTTCTATTTCGGTTC +
Preference number: 5 (lower is better)
Translates to: GKSCVLGEVFRIYSILKERLCSL*IFLFRF
Trigger: GAACCGAAATAGAAATATCAAGAGGCTACAAAGTCT...CTCTTTTAAAATGGAATATATTCTAAACACCTCTCCAAGGACACAAGACTTACC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344526.10
ENST00000502294.5
ENST00000509633.1
ENST00000634325.2
ENST00000634530.1
ENST00000635689.1
CDS GCA 72 bp GTGTTTCTTTCTGAGAGATGCCGGCAGTTTTCCTCCTaGTGTCCTGCGTGGTTCCTAACAGGCCAAGGACCG +
Preference number: 6 (lower is better)
Translates to: VFLSERCRQFSS*CPAWFLTGQGP
Trigger: CGGTCCTTGGCCTGTTAGGAACCACGCAGGACAGCAGGAGGAAAACTGCCGGCATCTCTCAGAAAGAAACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502441.2
ENST00000634546.1