RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PROKR2 (Homo sapiens)

Ensembl gene IDs: ENSG00000101292

Ensembl transcript IDs: ENST00000217270.4, ENST00000678059.1, ENST00000678254.1

Found 387 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCACGGGGGAGGCATGAACACAGATGTCATTTCCCATGCAGCCTATaGACTTGGTTGATGGTGGGTGATGCTCTGAGTACTGGACTGGGG +
Preference number: 1 (lower is better)
Translates to: ARGRHEHRCHFPCSL*TWLMVGDALSTGLG
Trigger: CCCCAGTCCAGTACTCAGAGCATCACCCACCATCAACCAAGTTCATAGGCTGCATGGGAAATGACATCTGTGTTCATGCCTCCCCCGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR TCA 90 bp TTACGACTTTGCAGCATTCAGCTTCTTGAGGGCACGGGGGAGGCATaGACACAGATGTCATTTCCCATGCAGCCTATGAACTTGGTTGAT +
Preference number: 1 (lower is better)
Translates to: LRLCSIQLLEGTGEA*TQMSFPMQPMNLVD
Trigger: ATCAACCAAGTTCATAGGCTGCATGGGAAATGACATCTGTGTTCATGCCTCCCCCGTGCCCTCAAGAAGCTGAATGCTGCAAAGTCGTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR TCA 90 bp CAGATGTCATTTCCCATGCAGCCTATGAACTTGGTTGATGGTGGGTaGTGCTCTGAGTACTGGACTGGGGTTTTCAATTGTGTGACACCA +
Preference number: 1 (lower is better)
Translates to: QMSFPMQPMNLVDGG*CSEYWTGVFNCVTP
Trigger: TGGTGTCACACAATTGAAAACCCCAGTCCAGTACTCAGAGCATCACCCACCATCAACCAAGTTCATAGGCTGCATGGGAAATGACATCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR GCA 90 bp AAATGTCAGCTCCTGCTGTCCCTGTCTAATCTCATTGGTGTGGTTTaGACACAGTACATGTTCAGTCCATGTCAGTTGCTGCTCCTTGTG +
Preference number: 1 (lower is better)
Translates to: KCQLLLSLSNLIGVV*TQYMFSPCQLLLLV
Trigger: CACAAGGAGCAGCAACTGACATGGACTGAACATGTACTGTGTGCAAACCACACCAATGAGATTAGACAGGGACAGCAGGAGCTGACATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR CCA 90 bp AGAGTAAATGTCAGCTCCTGCTGTCCCTGTCTAATCTCATTGGTGTaGTTTGCACACAGTACATGTTCAGTCCATGTCAGTTGCTGCTCC +
Preference number: 1 (lower is better)
Translates to: RVNVSSCCPCLISLV*FAHSTCSVHVSCCS
Trigger: GGAGCAGCAACTGACATGGACTGAACATGTACTGTGTGCAAACCACACCAATGAGATTAGACAGGGACAGCAGGAGCTGACATTTACTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR GCA 90 bp TCATTGGTGTGGTTTGCACACAGTACATGTTCAGTCCATGTCAGTTaGTGCTCCTTGTGTCTAATCTCCTTGTTGGGATTGTGGACACAG +
Preference number: 1 (lower is better)
Translates to: SLVWFAHSTCSVHVS*CSLCLISLLGLWTQ
Trigger: CTGTGTCCACAATCCCAACAAGGAGATTAGACACAAGGAGCAGCAACTGACATGGACTGAACATGTACTGTGTGCAAACCACACCAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR TCA 90 bp AGGTGGGTGGGAAAGTTCAGTATGATGGCTGTAACACACCTCCCATaGTGCTGTAAACCACGCACTGACAAACTTATCGTTACATTTCCA +
Preference number: 1 (lower is better)
Translates to: RWVGKFSMMAVTHLP*CCKPRTDKLIVTFP
Trigger: TGGAAATGTAACGATAAGTTTGTCAGTGCGTGGTTTACAGCATCATGGGAGGTGTGTTACAGCCATCATACTGAACTTTCCCACCCACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR TCA 90 bp AAGAACAGGGATCCCTTTTTGGCCCACTGTAGACAAGGTACACTGTaGAGTCTTCAGGAGTCTTTCATCCAAAGAACAGGGATGAAAAAG +
Preference number: 1 (lower is better)
Translates to: KNRDPFLAHCRQGTL*SLQESFIQRTGMKK
Trigger: CTTTTTCATCCCTGTTCTTTGGATGAAAGACTCCTGAAGACTTCACAGTGTACCTTGTCTACAGTGGGCCAAAAAGGGATCCCTGTTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR CCA 90 bp GGACACAGTAGGTGTCGAGCGGATATCAGTAAATGTCAGCTGATTTaGTTCATGTCTAGTCTCATTGTATGTTACGACTTTGCAGCATTC +
Preference number: 1 (lower is better)
Translates to: GHSRCRADISKCQLI*FMSSLIVCYDFAAF
Trigger: GAATGCTGCAAAGTCGTAACATACAATGAGACTAGACATGAACCAAATCAGCTGACATTTACTGATATCCGCTCGACACCTACTGTGTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR TCA 90 bp ATTGTGGACACAGTAGGTGTCGAGCGGATATCAGTAAATGTCAGCTaGTTTGGTTCATGTCTAGTCTCATTGTATGTTACGACTTTGCAG +
Preference number: 1 (lower is better)
Translates to: IVDTVGVERISVNVS*FGSCLVSLYVTTLQ
Trigger: CTGCAAAGTCGTAACATACAATGAGACTAGACATGAACCAAATCAGCTGACATTTACTGATATCCGCTCGACACCTACTGTGTCCACAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR TCA 90 bp ATAAACTGTTCAATATCACTTCTCCATTCTTATCGTGTGCACAGTTaGAAAGCACATTCACAAACCATGGCCTCAATGGGCTCTCCCAAC +
Preference number: 1 (lower is better)
Translates to: INCSISLLHSYRVHS*KAHSQTMASMGSPN
Trigger: GTTGGGAGAGCCCATTGAGGCCATGGTTTGTGAATGTGCTTTTCAACTGTGCACACGATAAGAATGGAGAAGTGATATTGAACAGTTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR TCA 90 bp GTACACTGTGAAGTCTTCAGGAGTCTTTCATCCAAAGAACAGGGATaGAAAAGTGTGGGTATTTCTCTAATAAATCACAGTGGATGGGGT +
Preference number: 1 (lower is better)
Translates to: VHCEVFRSLSSKEQG*KSVGISLINHSGWG
Trigger: ACCCCATCCACTGTGATTTATTAGAGAAATACCCACACTTTTTCATCCCTGTTCTTTGGATGAAAGACTCCTGAAGACTTCACAGTGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR CCA 90 bp AGAACAGGGATGAAAAAGTGTGGGTATTTCTCTAATAAATCACAGTaGATGGGGTTTCCAAATAAACTCCCTCCAAATAAACTGTTCAAT +
Preference number: 1 (lower is better)
Translates to: RTGMKKCGYFSNKSQ*MGFPNKLPPNKLFN
Trigger: ATTGAACAGTTTATTTGGAGGGAGTTTATTTGGAAACCCCATCCACTGTGATTTATTAGAGAAATACCCACACTTTTTCATCCCTGTTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR-3UTR TCA 90 bp GCATTTTCTGAGAGTACAATGATTGGGCTGAAGGTGAGTCTGCTGGGTGGTGATCAGCATTCAGCTTCTTaGGGGCACGGGGGAGGCATG +
Preference number: 2 (lower is better)
Translates to: AFSESTMIGLKVSLLGGDQHSAS*GHGGGM
Trigger: CATGCCTCCCCCGTGCCCTCAAGAAGCTGAATGCTG...ATCACCACCCAGCAGACTCACCTTCAGCCCAATCATTGTACTCTCAGAAAATGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR-3UTR TCA 90 bp GAGCCACTGAAATCCTTTGCACTGAGGAGGCAAAAATTGACACCTCAGGATTACCAGCATTCAGCTTCTTaGGGGCACGGGGGAGGCATG +
Preference number: 2 (lower is better)
Translates to: EPLKSFALRRQKLTPQDYQHSAS*GHGGGM
Trigger: CATGCCTCCCCCGTGCCCTCAAGAAGCTGAATGCTG...GTAATCCTGAGGTGTCAATTTTTGCCTCCTCAGTGCAAAGGATTTCAGTGGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR-3UTR TCA 90 bp ATCCTGCTGACAGACTTGACTGGTACATGGTCCATTCCTAAAGAATCTCCTGATCAGCATTCAGCTTCTTaGGGGCACGGGGGAGGCATG +
Preference number: 2 (lower is better)
Translates to: ILLTDLTGTWSIPKESPDQHSAS*GHGGGM
Trigger: CATGCCTCCCCCGTGCCCTCAAGAAGCTGAATGCTG...ATCAGGAGATTCTTTAGGAATGGACCATGTACCAGTCAAGTCTGTCAGCAGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR-3UTR TCA 90 bp GCATTTTCTGAGAGTACAATGATTGGGCTGAAGGTGAGTCTGCTGGGTGGTGATCCTGCTTCAGCCTCCTaGGTAACTGGGATTACAGGC +
Preference number: 2 (lower is better)
Translates to: AFSESTMIGLKVSLLGGDPASAS*VTGITG
Trigger: GCCTGTAATCCCAGTTACTCAGGAGGCTGAAGCAGG...ATCACCACCCAGCAGACTCACCTTCAGCCCAATCATTGTACTCTCAGAAAATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR-3UTR CCA 90 bp TCTAGGACAAAAAGGAACAGGGTGATGAATCCTGCTGACAGACTTGACTGGTACAGCCTCCTGAGTAACTaGGATTACAGGCGCCCGCCA +
Preference number: 2 (lower is better)
Translates to: SRTKRNRVMNPADRLDWYSLLSN*DYRRPP
Trigger: TGGCGGGCGCCTGTAATCCCAGTTACTCAGGAGGCT...GTACCAGTCAAGTCTGTCAGCAGGATTCATCACCCTGTTCCTTTTTGTCCTAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR-3UTR TCA 90 bp GTGTCTAATCTCCTTGTTGGGATTGTGGACACAGTAGGTGTCGAGCGGATATCATGGTGGGTGATGCTCTaGGTACTGGACTGGGGTTTT +
Preference number: 2 (lower is better)
Translates to: VSNLLVGIVDTVGVERISWWVML*VLDWGF
Trigger: AAAACCCCAGTCCAGTACTCAGAGCATCACCCACCA...TGATATCCGCTCGACACCTACTGTGTCCACAATCCCAACAAGGAGATTAGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR-3UTR TCA 90 bp AGAACAGGGATCCCTTTTTGGCCCACTGTAGACAAGGTACACTGTGAAGTCTTCTGGTGGGTGATGCTCTaGGTACTGGACTGGGGTTTT +
Preference number: 2 (lower is better)
Translates to: RTGIPFWPTVDKVHCEVFWWVML*VLDWGF
Trigger: AAAACCCCAGTCCAGTACTCAGAGCATCACCCACCA...GAAGACTTCACAGTGTACCTTGTCTACAGTGGGCCAAAAAGGGATCCCTGTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR-3UTR CCA 90 bp AGAACAGGGATCCCTTTTTGGCCCACTGTAGACAAGGTACACTGTGAAGTCTTCAGGGTTTCACCATGTTaGCCAGCCTGGGTTGAACTC +
Preference number: 2 (lower is better)
Translates to: RTGIPFWPTVDKVHCEVFRVSPC*PAWVEL
Trigger: GAGTTCAACCCAGGCTGGCCAACATGGTGAAACCCT...GAAGACTTCACAGTGTACCTTGTCTACAGTGGGCCAAAAAGGGATCCCTGTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR-3UTR CCA 90 bp AGAACAGGGATCCCTTTTTGGCCCACTGTAGACAAGGTACACTGTGAAGTCTTCGGAGGCAGTAGGAGGTaGGTGGGAAAGTTCAGTATG +
Preference number: 2 (lower is better)
Translates to: RTGIPFWPTVDKVHCEVFGGSRR*VGKFSM
Trigger: CATACTGAACTTTCCCACCCACCTCCTACTGCCTCC...GAAGACTTCACAGTGTACCTTGTCTACAGTGGGCCAAAAAGGGATCCCTGTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR-3UTR CCA 90 bp ATCCTGCTGACAGACTTGACTGGTACATGGTCCATTCCTAAAGAATCTCCTGATGTGATCTGCCCATCTTaGCCTCCCGAAGTGCTGGGA +
Preference number: 2 (lower is better)
Translates to: ILLTDLTGTWSIPKESPDVICPS*PPEVLG
Trigger: TCCCAGCACTTCGGGAGGCCAAGATGGGCAGATCAC...ATCAGGAGATTCTTTAGGAATGGACCATGTACCAGTCAAGTCTGTCAGCAGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR-3UTR TCA 90 bp TTGCTGCTCCTTGTGTCTAATCTCCTTGTTGGGATTGTGGACACAGTAGGTGTCTTGGTTGATGGTGGGTaGTGCTCTGAGTACTGGACT +
Preference number: 2 (lower is better)
Translates to: LLLLVSNLLVGIVDTVGVLVDGG*CSEYWT
Trigger: AGTCCAGTACTCAGAGCATCACCCACCATCAACCAA...GACACCTACTGTGTCCACAATCCCAACAAGGAGATTAGACACAAGGAGCAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR-3UTR TCA 90 bp GCATTTTCTGAGAGTACAATGATTGGGCTGAAGGTGAGTCTGCTGGGTGGTGATGTAACACACCTCCCATaGTGCTGTAAACCACGCACT +
Preference number: 2 (lower is better)
Translates to: AFSESTMIGLKVSLLGGDVTHLP*CCKPRT
Trigger: AGTGCGTGGTTTACAGCATCATGGGAGGTGTGTTAC...ATCACCACCCAGCAGACTCACCTTCAGCCCAATCATTGTACTCTCAGAAAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR-3UTR GCA 90 bp AGAACAGGGATCCCTTTTTGGCCCACTGTAGACAAGGTACACTGTGAAGTCTTCGCAATCTCAGCTCACTaGAAACTCCAACTCCCAGGT +
Preference number: 2 (lower is better)
Translates to: RTGIPFWPTVDKVHCEVFAISAH*KLQLPG
Trigger: ACCTGGGAGTTGGAGTTTGCAGTGAGCTGAGATTGC...GAAGACTTCACAGTGTACCTTGTCTACAGTGGGCCAAAAAGGGATCCCTGTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR-3UTR CCA 90 bp TCCTTAGCAAAATGCCCACAGAGATTATGTTCATTGCCAGTGGCAACCTCCACTGGAGGCAGTAGGAGGTaGGTGGGAAAGTTCAGTATG +
Preference number: 2 (lower is better)
Translates to: SLAKCPQRLCSLPVATSTGGSRR*VGKFSM
Trigger: CATACTGAACTTTCCCACCCACCTCCTACTGCCTCC...AGTGGAGGTTGCCACTGGCAATGAACATAATCTCTGTGGGCATTTTGCTAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR-3UTR CCA 90 bp GAGCCACTGAAATCCTTTGCACTGAGGAGGCAAAAATTGACACCTCAGGATTACGGAGGCAGTAGGAGGTaGGTGGGAAAGTTCAGTATG +
Preference number: 2 (lower is better)
Translates to: EPLKSFALRRQKLTPQDYGGSRR*VGKFSM
Trigger: CATACTGAACTTTCCCACCCACCTCCTACTGCCTCC...GTAATCCTGAGGTGTCAATTTTTGCCTCCTCAGTGCAAAGGATTTCAGTGGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR CAA 90 bp ATGTCTAGTCTCATTGTATGTTACGACTTTGCAGCATTCAGCTTCTaGAGGGCACGGGGGAGGCATGAACACAGATGTCATTTCCCATGC +
Preference number: 2 (lower is better)
Translates to: MSSLIVCYDFAAFSF*RARGRHEHRCHFPC
Trigger: GCATGGGAAATGACATCTGTGTTCATGCCTCCCCCGTGCCCTCAAGAAGCTGAATGCTGCAAAGTCGTAACATACAATGAGACTAGACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR-3UTR TCA 90 bp ATCCTGCTGACAGACTTGACTGGTACATGGTCCATTCCTAAAGAATCTCCTGATTGGTGGGTGATGCTCTaGGTACTGGACTGGGGTTTT +
Preference number: 2 (lower is better)
Translates to: ILLTDLTGTWSIPKESPDWWVML*VLDWGF
Trigger: AAAACCCCAGTCCAGTACTCAGAGCATCACCCACCA...ATCAGGAGATTCTTTAGGAATGGACCATGTACCAGTCAAGTCTGTCAGCAGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR-3UTR TCA 90 bp TCCTTAGCAAAATGCCCACAGAGATTATGTTCATTGCCAGTGGCAACCTCCACTGTAACACACCTCCCATaGTGCTGTAAACCACGCACT +
Preference number: 2 (lower is better)
Translates to: SLAKCPQRLCSLPVATSTVTHLP*CCKPRT
Trigger: AGTGCGTGGTTTACAGCATCATGGGAGGTGTGTTAC...AGTGGAGGTTGCCACTGGCAATGAACATAATCTCTGTGGGCATTTTGCTAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR-3UTR GCA 90 bp GAGCCACTGAAATCCTTTGCACTGAGGAGGCAAAAATTGACACCTCAGGATTACAGGCATGAGCCATCATaGCTGGCCTATAGCCTTTTG +
Preference number: 2 (lower is better)
Translates to: EPLKSFALRRQKLTPQDYRHEPS*LAYSLL
Trigger: CAAAAGGCTATAGGCCAGGCATGATGGCTCATGCCT...GTAATCCTGAGGTGTCAATTTTTGCCTCCTCAGTGCAAAGGATTTCAGTGGCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR-3UTR GCA 90 bp TCTAGGACAAAAAGGAACAGGGTGATGAATCCTGCTGACAGACTTGACTGGTACAGGCATGAGCCATCATaGCTGGCCTATAGCCTTTTG +
Preference number: 2 (lower is better)
Translates to: SRTKRNRVMNPADRLDWYRHEPS*LAYSLL
Trigger: CAAAAGGCTATAGGCCAGGCATGATGGCTCATGCCT...GTACCAGTCAAGTCTGTCAGCAGGATTCATCACCCTGTTCCTTTTTGTCCTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR-3UTR GCA 90 bp TCTAGGACAAAAAGGAACAGGGTGATGAATCCTGCTGACAGACTTGACTGGTACGCAATCTCAGCTCACTaGAAACTCCAACTCCCAGGT +
Preference number: 2 (lower is better)
Translates to: SRTKRNRVMNPADRLDWYAISAH*KLQLPG
Trigger: ACCTGGGAGTTGGAGTTTGCAGTGAGCTGAGATTGC...GTACCAGTCAAGTCTGTCAGCAGGATTCATCACCCTGTTCCTTTTTGTCCTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR CAA 90 bp CTCATTGGTGTGGTTTGCACACAGTACATGTTCAGTCCATGTCAGTaGCTGCTCCTTGTGTCTAATCTCCTTGTTGGGATTGTGGACACA +
Preference number: 2 (lower is better)
Translates to: LIGVVCTQYMFSPCQ*LLLVSNLLVGIVDT
Trigger: TGTGTCCACAATCCCAACAAGGAGATTAGACACAAGGAGCAGCAACTGACATGGACTGAACATGTACTGTGTGCAAACCACACCAATGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR-3UTR TCA 90 bp ATCCTGCTGACAGACTTGACTGGTACATGGTCCATTCCTAAAGAATCTCCTGATTTCCCATGCAGCCTATaGACTTGGTTGATGGTGGGT +
Preference number: 2 (lower is better)
Translates to: ILLTDLTGTWSIPKESPDFPCSL*TWLMVG
Trigger: ACCCACCATCAACCAAGTTCATAGGCTGCATGGGAA...ATCAGGAGATTCTTTAGGAATGGACCATGTACCAGTCAAGTCTGTCAGCAGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR-3UTR TCA 90 bp GCATTTTCTGAGAGTACAATGATTGGGCTGAAGGTGAGTCTGCTGGGTGGTGATTGGCCTATAGCCTTTTaGTATTCCTGCACTGGTAAG +
Preference number: 2 (lower is better)
Translates to: AFSESTMIGLKVSLLGGDWPIAF*YSCTGK
Trigger: CTTACCAGTGCAGGAATATCAAAAGGCTATAGGCCA...ATCACCACCCAGCAGACTCACCTTCAGCCCAATCATTGTACTCTCAGAAAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR-3UTR TCA 90 bp CTTGGGGTCACTGAGAATCTGAGGTTAAATTTCCCAGATTATAACCAAGAACAGCCTGCTTCAGCCTCCTaGGTAACTGGGATTACAGGC +
Preference number: 2 (lower is better)
Translates to: LGVTENLRLNFPDYNQEQPASAS*VTGITG
Trigger: GCCTGTAATCCCAGTTACTCAGGAGGCTGAAGCAGG...CTGTTCTTGGTTATAATCTGGGAAATTTAACCTCAGATTCTCAGTGACCCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR-3UTR GCA 90 bp TCTAGGACAAAAAGGAACAGGGTGATGAATCCTGCTGACAGACTTGACTGGTACACTAGGGTGCTATTTTaGAACATGCAGGGAGGACTG +
Preference number: 2 (lower is better)
Translates to: SRTKRNRVMNPADRLDWYTRVLF*NMQGGL
Trigger: CAGTCCTCCCTGCATGTTGCAAAATAGCACCCTAGT...GTACCAGTCAAGTCTGTCAGCAGGATTCATCACCCTGTTCCTTTTTGTCCTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR-3UTR GCA 90 bp GCATTTTCTGAGAGTACAATGATTGGGCTGAAGGTGAGTCTGCTGGGTGGTGATTATGCAGCACTAGGGTaGTATTTTGCAACATGCAGG +
Preference number: 2 (lower is better)
Translates to: AFSESTMIGLKVSLLGGDYAALG*YFATCR
Trigger: CCTGCATGTTGCAAAATAGCACCCTAGTGCTGCATA...ATCACCACCCAGCAGACTCACCTTCAGCCCAATCATTGTACTCTCAGAAAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR-3UTR GCA 90 bp TCTAGGACAAAAAGGAACAGGGTGATGAATCCTGCTGACAGACTTGACTGGTACATTCACTGCAACCTCTaGCTCTGGGGTTCAAGCAAT +
Preference number: 2 (lower is better)
Translates to: SRTKRNRVMNPADRLDWYIHCNL*LWGSSN
Trigger: ATTGCTTGAACCCCAGAGGCAGAGGTTGCAGTGAAT...GTACCAGTCAAGTCTGTCAGCAGGATTCATCACCCTGTTCCTTTTTGTCCTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR-3UTR CCA 90 bp CAGGAGTCTTTCATCCAAAGAACAGGGATGAAAAAGTGTGGGTATTTCTCTAATAGCCTCCTGAGTAACTaGGATTACAGGCGCCCGCCA +
Preference number: 2 (lower is better)
Translates to: QESFIQRTGMKKCGYFSNSLLSN*DYRRPP
Trigger: TGGCGGGCGCCTGTAATCCCAGTTACTCAGGAGGCT...ATTAGAGAAATACCCACACTTTTTCATCCCTGTTCTTTGGATGAAAGACTCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR-3UTR CCA 90 bp TCCCTCCAAATAAACTGTTCAATATCACTTCTCCATTCTTATCGTGTGCACAGTAGCCTCCTGAGTAACTaGGATTACAGGCGCCCGCCA +
Preference number: 2 (lower is better)
Translates to: SLQINCSISLLHSYRVHSSLLSN*DYRRPP
Trigger: TGGCGGGCGCCTGTAATCCCAGTTACTCAGGAGGCT...ACTGTGCACACGATAAGAATGGAGAAGTGATATTGAACAGTTTATTTGGAGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR-3UTR CCA 90 bp GCATTTTCTGAGAGTACAATGATTGGGCTGAAGGTGAGTCTGCTGGGTGGTGATCTGAACCCAGGTCTTTaGATTCTAGGTAGAGTTCCT +
Preference number: 2 (lower is better)
Translates to: AFSESTMIGLKVSLLGGDLNPGL*ILGRVP
Trigger: AGGAACTCTACCTAGAATCCAAAGACCTGGGTTCAG...ATCACCACCCAGCAGACTCACCTTCAGCCCAATCATTGTACTCTCAGAAAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR-3UTR CCA 90 bp TCTAGGACAAAAAGGAACAGGGTGATGAATCCTGCTGACAGACTTGACTGGTACACAGGGATCCCTTTTTaGCCCACTGTAGACAAGGTA +
Preference number: 2 (lower is better)
Translates to: SRTKRNRVMNPADRLDWYTGIPF*PTVDKV
Trigger: TACCTTGTCTACAGTGGGCCAAAAAGGGATCCCTGT...GTACCAGTCAAGTCTGTCAGCAGGATTCATCACCCTGTTCCTTTTTGTCCTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR-3UTR TCA 90 bp AGAACAGGGATCCCTTTTTGGCCCACTGTAGACAAGGTACACTGTGAAGTCTTCAGGGAAGATGGAGGGTaGACTATCTATATATCTGGA +
Preference number: 2 (lower is better)
Translates to: RTGIPFWPTVDKVHCEVFREDGG*TIYISG
Trigger: TCCAGATATATAGATAGTTCACCCTCCATCTTCCCT...GAAGACTTCACAGTGTACCTTGTCTACAGTGGGCCAAAAAGGGATCCCTGTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR-3UTR GCA 90 bp TCTAGGACAAAAAGGAACAGGGTGATGAATCCTGCTGACAGACTTGACTGGTACTATGCAGCACTAGGGTaGTATTTTGCAACATGCAGG +
Preference number: 2 (lower is better)
Translates to: SRTKRNRVMNPADRLDWYYAALG*YFATCR
Trigger: CCTGCATGTTGCAAAATAGCACCCTAGTGCTGCATA...GTACCAGTCAAGTCTGTCAGCAGGATTCATCACCCTGTTCCTTTTTGTCCTAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR-3UTR CCA 90 bp TCTAGGACAAAAAGGAACAGGGTGATGAATCCTGCTGACAGACTTGACTGGTACTTGGTCAAATATGGTTaGGTCAGTCCCAAACCAGGT +
Preference number: 2 (lower is better)
Translates to: SRTKRNRVMNPADRLDWYLVKYG*VSPKPG
Trigger: ACCTGGTTTGGGACTGACCCAACCATATTTGACCAA...GTACCAGTCAAGTCTGTCAGCAGGATTCATCACCCTGTTCCTTTTTGTCCTAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR-3UTR TCA 90 bp TGTCAGCTGATTTGGTTCATGTCTAGTCTCATTGTATGTTACGACTTTGCAGCATTGGTTGATGGTGGGTaGTGCTCTGAGTACTGGACT +
Preference number: 2 (lower is better)
Translates to: CQLIWFMSSLIVCYDFAALVDGG*CSEYWT
Trigger: AGTCCAGTACTCAGAGCATCACCCACCATCAACCAA...TGCTGCAAAGTCGTAACATACAATGAGACTAGACATGAACCAAATCAGCTGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR-3UTR TCA 90 bp TGTCAGCTGATTTGGTTCATGTCTAGTCTCATTGTATGTTACGACTTTGCAGCATTCCCATGCAGCCTATaGACTTGGTTGATGGTGGGT +
Preference number: 2 (lower is better)
Translates to: CQLIWFMSSLIVCYDFAAFPCSL*TWLMVG
Trigger: ACCCACCATCAACCAAGTTCATAGGCTGCATGGGAA...TGCTGCAAAGTCGTAACATACAATGAGACTAGACATGAACCAAATCAGCTGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR-3UTR TCA 90 bp CTTGGGGTCACTGAGAATCTGAGGTTAAATTTCCCAGATTATAACCAAGAACAGTTCCCATGCAGCCTATaGACTTGGTTGATGGTGGGT +
Preference number: 2 (lower is better)
Translates to: LGVTENLRLNFPDYNQEQFPCSL*TWLMVG
Trigger: ACCCACCATCAACCAAGTTCATAGGCTGCATGGGAA...CTGTTCTTGGTTATAATCTGGGAAATTTAACCTCAGATTCTCAGTGACCCCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR-3UTR TCA 90 bp GAGCCACTGAAATCCTTTGCACTGAGGAGGCAAAAATTGACACCTCAGGATTACAGGGAAGATGGAGGGTaGACTATCTATATATCTGGA +
Preference number: 2 (lower is better)
Translates to: EPLKSFALRRQKLTPQDYREDGG*TIYISG
Trigger: TCCAGATATATAGATAGTTCACCCTCCATCTTCCCT...GTAATCCTGAGGTGTCAATTTTTGCCTCCTCAGTGCAAAGGATTTCAGTGGCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR-3UTR TCA 90 bp AGAACAGGGATCCCTTTTTGGCCCACTGTAGACAAGGTACACTGTGAAGTCTTCGCATCAGTGGGAAAGTaGTTTTTAGGTTCTTTCCTT +
Preference number: 2 (lower is better)
Translates to: RTGIPFWPTVDKVHCEVFASVGK*FLGSFL
Trigger: AAGGAAAGAACCTAAAAATCACTTTCCCACTGATGC...GAAGACTTCACAGTGTACCTTGTCTACAGTGGGCCAAAAAGGGATCCCTGTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR-3UTR TCA 90 bp GCATTTTCTGAGAGTACAATGATTGGGCTGAAGGTGAGTCTGCTGGGTGGTGATTCCAAAGAACAGGGATaGAAAAGTGTGGGTATTTCT +
Preference number: 2 (lower is better)
Translates to: AFSESTMIGLKVSLLGGDSKEQG*KSVGIS
Trigger: AGAAATACCCACACTTTTTCATCCCTGTTCTTTGGA...ATCACCACCCAGCAGACTCACCTTCAGCCCAATCATTGTACTCTCAGAAAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR-3UTR GCA 90 bp ATCCTGCTGACAGACTTGACTGGTACATGGTCCATTCCTAAAGAATCTCCTGATTGCTATTTTGCAACATaGAGGGAGGACTGTCAACAC +
Preference number: 2 (lower is better)
Translates to: ILLTDLTGTWSIPKESPDCYFAT*REDCQH
Trigger: GTGTTGACAGTCCTCCCTGCATGTTGCAAAATAGCA...ATCAGGAGATTCTTTAGGAATGGACCATGTACCAGTCAAGTCTGTCAGCAGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR-3UTR CCA 90 bp AGAACAGGGATCCCTTTTTGGCCCACTGTAGACAAGGTACACTGTGAAGTCTTCCTAATCTCATTGGTGTaGTTTGCACACAGTACATGT +
Preference number: 2 (lower is better)
Translates to: RTGIPFWPTVDKVHCEVFLISLV*FAHSTC
Trigger: ACATGTACTGTGTGCAAACCACACCAATGAGATTAG...GAAGACTTCACAGTGTACCTTGTCTACAGTGGGCCAAAAAGGGATCCCTGTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR-3UTR TCA 90 bp TCCTTAGCAAAATGCCCACAGAGATTATGTTCATTGCCAGTGGCAACCTCCACTGCATCAGTGGGAAAGTaGTTTTTAGGTTCTTTCCTT +
Preference number: 2 (lower is better)
Translates to: SLAKCPQRLCSLPVATSTASVGK*FLGSFL
Trigger: AAGGAAAGAACCTAAAAATCACTTTCCCACTGATGC...AGTGGAGGTTGCCACTGGCAATGAACATAATCTCTGTGGGCATTTTGCTAAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR-3UTR GCA 90 bp CAGGAGTCTTTCATCCAAAGAACAGGGATGAAAAAGTGTGGGTATTTCTCTAATGCAATCTCAGCTCACTaGAAACTCCAACTCCCAGGT +
Preference number: 2 (lower is better)
Translates to: QESFIQRTGMKKCGYFSNAISAH*KLQLPG
Trigger: ACCTGGGAGTTGGAGTTTGCAGTGAGCTGAGATTGC...ATTAGAGAAATACCCACACTTTTTCATCCCTGTTCTTTGGATGAAAGACTCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR-3UTR TCA 90 bp CTTGGGGTCACTGAGAATCTGAGGTTAAATTTCCCAGATTATAACCAAGAACAGTGGCCTATAGCCTTTTaGTATTCCTGCACTGGTAAG +
Preference number: 2 (lower is better)
Translates to: LGVTENLRLNFPDYNQEQWPIAF*YSCTGK
Trigger: CTTACCAGTGCAGGAATATCAAAAGGCTATAGGCCA...CTGTTCTTGGTTATAATCTGGGAAATTTAACCTCAGATTCTCAGTGACCCCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR-3UTR GCA 90 bp CTTGGGGTCACTGAGAATCTGAGGTTAAATTTCCCAGATTATAACCAAGAACAGTCAGTCCATGTCAGTTaGTGCTCCTTGTGTCTAATC +
Preference number: 2 (lower is better)
Translates to: LGVTENLRLNFPDYNQEQSVHVS*CSLCLI
Trigger: GATTAGACACAAGGAGCAGCAACTGACATGGACTGA...CTGTTCTTGGTTATAATCTGGGAAATTTAACCTCAGATTCTCAGTGACCCCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR-3UTR GCA 90 bp CTTGGGGTCACTGAGAATCTGAGGTTAAATTTCCCAGATTATAACCAAGAACAGGTAAATGTCAGCTCCTaGTGTCCCTGTCTAATCTCA +
Preference number: 2 (lower is better)
Translates to: LGVTENLRLNFPDYNQEQVNVSS*CPCLIS
Trigger: TGAGATTAGACAGGGACAGCAGGAGCTGACATTTAC...CTGTTCTTGGTTATAATCTGGGAAATTTAACCTCAGATTCTCAGTGACCCCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR CAA 90 bp AATAAACTGTTCAATATCACTTCTCCATTCTTATCGTGTGCACAGTaGAAAAGCACATTCACAAACCATGGCCTCAATGGGCTCTCCCAA +
Preference number: 2 (lower is better)
Translates to: NKLFNITSPFLSCAQ*KSTFTNHGLNGLSQ
Trigger: TTGGGAGAGCCCATTGAGGCCATGGTTTGTGAATGTGCTTTTCAACTGTGCACACGATAAGAATGGAGAAGTGATATTGAACAGTTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR-3UTR TCA 90 bp TCCCTCCAAATAAACTGTTCAATATCACTTCTCCATTCTTATCGTGTGCACAGTTGGCCTATAGCCTTTTaGTATTCCTGCACTGGTAAG +
Preference number: 2 (lower is better)
Translates to: SLQINCSISLLHSYRVHSWPIAF*YSCTGK
Trigger: CTTACCAGTGCAGGAATATCAAAAGGCTATAGGCCA...ACTGTGCACACGATAAGAATGGAGAAGTGATATTGAACAGTTTATTTGGAGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR-3UTR TCA 90 bp CTTGGGGTCACTGAGAATCTGAGGTTAAATTTCCCAGATTATAACCAAGAACAGTATCGTGTGCACAGTTaGAAAGCACATTCACAAACC +
Preference number: 2 (lower is better)
Translates to: LGVTENLRLNFPDYNQEQYRVHS*KAHSQT
Trigger: GGTTTGTGAATGTGCTTTTCAACTGTGCACACGATA...CTGTTCTTGGTTATAATCTGGGAAATTTAACCTCAGATTCTCAGTGACCCCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR-3UTR GCA 90 bp CAGGAGTCTTTCATCCAAAGAACAGGGATGAAAAAGTGTGGGTATTTCTCTAATGTAAATGTCAGCTCCTaGTGTCCCTGTCTAATCTCA +
Preference number: 2 (lower is better)
Translates to: QESFIQRTGMKKCGYFSNVNVSS*CPCLIS
Trigger: TGAGATTAGACAGGGACAGCAGGAGCTGACATTTAC...ATTAGAGAAATACCCACACTTTTTCATCCCTGTTCTTTGGATGAAAGACTCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR-3UTR CCA 90 bp TCTAGGACAAAAAGGAACAGGGTGATGAATCCTGCTGACAGACTTGACTGGTACAAATGTCAGCTGATTTaGTTCATGTCTAGTCTCATT +
Preference number: 2 (lower is better)
Translates to: SRTKRNRVMNPADRLDWYKCQLI*FMSSLI
Trigger: AATGAGACTAGACATGAACCAAATCAGCTGACATTT...GTACCAGTCAAGTCTGTCAGCAGGATTCATCACCCTGTTCCTTTTTGTCCTAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR-3UTR CCA 90 bp TCCTTAGCAAAATGCCCACAGAGATTATGTTCATTGCCAGTGGCAACCTCCACTAAATGTCAGCTGATTTaGTTCATGTCTAGTCTCATT +
Preference number: 2 (lower is better)
Translates to: SLAKCPQRLCSLPVATSTKCQLI*FMSSLI
Trigger: AATGAGACTAGACATGAACCAAATCAGCTGACATTT...AGTGGAGGTTGCCACTGGCAATGAACATAATCTCTGTGGGCATTTTGCTAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR-3UTR CCA 90 bp CAGGAGTCTTTCATCCAAAGAACAGGGATGAAAAAGTGTGGGTATTTCTCTAATCTGAACCCAGGTCTTTaGATTCTAGGTAGAGTTCCT +
Preference number: 2 (lower is better)
Translates to: QESFIQRTGMKKCGYFSNLNPGL*ILGRVP
Trigger: AGGAACTCTACCTAGAATCCAAAGACCTGGGTTCAG...ATTAGAGAAATACCCACACTTTTTCATCCCTGTTCTTTGGATGAAAGACTCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR-3UTR TCA 90 bp CTTGGGGTCACTGAGAATCTGAGGTTAAATTTCCCAGATTATAACCAAGAACAGTCAGTAAATGTCAGCTaGTTTGGTTCATGTCTAGTC +
Preference number: 2 (lower is better)
Translates to: LGVTENLRLNFPDYNQEQSVNVS*FGSCLV
Trigger: GACTAGACATGAACCAAATCAGCTGACATTTACTGA...CTGTTCTTGGTTATAATCTGGGAAATTTAACCTCAGATTCTCAGTGACCCCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR-3UTR GCA 90 bp ATCCTGCTGACAGACTTGACTGGTACATGGTCCATTCCTAAAGAATCTCCTGATTGCATTATTACACAATaGATTTCAAAGCCAAGCAAG +
Preference number: 2 (lower is better)
Translates to: ILLTDLTGTWSIPKESPDCIITQ*ISKPSK
Trigger: CTTGCTTGGCTTTGAAATGCATTGTGTAATAATGCA...ATCAGGAGATTCTTTAGGAATGGACCATGTACCAGTCAAGTCTGTCAGCAGGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR-3UTR TCA 90 bp CAGGAGTCTTTCATCCAAAGAACAGGGATGAAAAAGTGTGGGTATTTCTCTAATTCAGTAAATGTCAGCTaGTTTGGTTCATGTCTAGTC +
Preference number: 2 (lower is better)
Translates to: QESFIQRTGMKKCGYFSNSVNVS*FGSCLV
Trigger: GACTAGACATGAACCAAATCAGCTGACATTTACTGA...ATTAGAGAAATACCCACACTTTTTCATCCCTGTTCTTTGGATGAAAGACTCCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR-3UTR TCA 90 bp TCCCTCCAAATAAACTGTTCAATATCACTTCTCCATTCTTATCGTGTGCACAGTCATGAATTTAGGACTTaGGTCTTAGAGTTAGGACCT +
Preference number: 2 (lower is better)
Translates to: SLQINCSISLLHSYRVHSHEFRT*VLELGP
Trigger: AGGTCCTAACTCTAAGACTCAAGTCCTAAATTCATG...ACTGTGCACACGATAAGAATGGAGAAGTGATATTGAACAGTTTATTTGGAGGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR-3UTR GCA 90 bp TCCCTCCAAATAAACTGTTCAATATCACTTCTCCATTCTTATCGTGTGCACAGTCAGTCCTTAGCAAAATaGCCACAGAGATTATGTTCA +
Preference number: 2 (lower is better)
Translates to: SLQINCSISLLHSYRVHSQSLAK*PQRLCS
Trigger: TGAACATAATCTCTGTGGGCATTTTGCTAAGGACTG...ACTGTGCACACGATAAGAATGGAGAAGTGATATTGAACAGTTTATTTGGAGGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR-3UTR CCA 90 bp CTTGGGGTCACTGAGAATCTGAGGTTAAATTTCCCAGATTATAACCAAGAACAGAAATGTCAGCTGATTTaGTTCATGTCTAGTCTCATT +
Preference number: 2 (lower is better)
Translates to: LGVTENLRLNFPDYNQEQKCQLI*FMSSLI
Trigger: AATGAGACTAGACATGAACCAAATCAGCTGACATTT...CTGTTCTTGGTTATAATCTGGGAAATTTAACCTCAGATTCTCAGTGACCCCAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR-3UTR CAA 90 bp GCATTTTCTGAGAGTACAATGATTGGGCTGAAGGTGAGTCTGCTGGGTGGTGATGCAGCATTCAGCTTCTaGAGGGCACGGGGGAGGCAT +
Preference number: 3 (lower is better)
Translates to: AFSESTMIGLKVSLLGGDAAFSF*RARGRH
Trigger: ATGCCTCCCCCGTGCCCTCAAGAAGCTGAATGCTGC...ATCACCACCCAGCAGACTCACCTTCAGCCCAATCATTGTACTCTCAGAAAATGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR-3UTR CAA 90 bp AGAACAGGGATCCCTTTTTGGCCCACTGTAGACAAGGTACACTGTGAAGTCTTCGCAGCATTCAGCTTCTaGAGGGCACGGGGGAGGCAT +
Preference number: 3 (lower is better)
Translates to: RTGIPFWPTVDKVHCEVFAAFSF*RARGRH
Trigger: ATGCCTCCCCCGTGCCCTCAAGAAGCTGAATGCTGC...GAAGACTTCACAGTGTACCTTGTCTACAGTGGGCCAAAAAGGGATCCCTGTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR-3UTR CAA 90 bp TCTAGGACAAAAAGGAACAGGGTGATGAATCCTGCTGACAGACTTGACTGGTACGGGTTTTTGGCCATGTaGGCCAGGCTGGTCTTGAAC +
Preference number: 3 (lower is better)
Translates to: SRTKRNRVMNPADRLDWYGFLAM*ARLVLN
Trigger: GTTCAAGACCAGCCTGGCCAACATGGCCAAAAACCC...GTACCAGTCAAGTCTGTCAGCAGGATTCATCACCCTGTTCCTTTTTGTCCTAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR-3UTR CAA 90 bp TCTAGGACAAAAAGGAACAGGGTGATGAATCCTGCTGACAGACTTGACTGGTACCCCTGTCTAATCTCATaGGTGTGGTTTGCACACAGT +
Preference number: 3 (lower is better)
Translates to: SRTKRNRVMNPADRLDWYPCLIS*VWFAHS
Trigger: ACTGTGTGCAAACCACACCAATGAGATTAGACAGGG...GTACCAGTCAAGTCTGTCAGCAGGATTCATCACCCTGTTCCTTTTTGTCCTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR TCA 72 bp TTTCCCATGCAGCCTATGAACTTGGTTGATGGTGGGTaGTGCTCTGAGTACTGGACTGGGGTTTTCAATTGT +
Preference number: 3 (lower is better)
Translates to: FPMQPMNLVDGG*CSEYWTGVFNC
Trigger: ACAATTGAAAACCCCAGTCCAGTACTCAGAGCATCACCCACCATCAACCAAGTTCATAGGCTGCATGGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR TCA 72 bp GATCCCTTTTTGGCCCACTGTAGACAAGGTACACTGTaGAGTCTTCAGGAGTCTTTCATCCAAAGAACAGGG +
Preference number: 3 (lower is better)
Translates to: DPFLAHCRQGTL*SLQESFIQRTG
Trigger: CCCTGTTCTTTGGATGAAAGACTCCTGAAGACTTCACAGTGTACCTTGTCTACAGTGGGCCAAAAAGGGATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR CCA 72 bp ACAGTTGAAAAGCACATTCACAAACCATGGCCTCAATaGGCTCTCCCAACAGTCTTGCAAGGTATGAAGAGC +
Preference number: 3 (lower is better)
Translates to: TVEKHIHKPWPQ*ALPTVLQGMKS
Trigger: GCTCTTCATACCTTGCAAGACTGTTGGGAGAGCCCATTGAGGCCATGGTTTGTGAATGTGCTTTTCAACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR-3UTR CAA 90 bp GAGCCACTGAAATCCTTTGCACTGAGGAGGCAAAAATTGACACCTCAGGATTACTTGTGTCTAATCTCCTaGTTGGGATTGTGGACACAG +
Preference number: 3 (lower is better)
Translates to: EPLKSFALRRQKLTPQDYLCLIS*LGLWTQ
Trigger: CTGTGTCCACAATCCCAACAAGGAGATTAGACACAA...GTAATCCTGAGGTGTCAATTTTTGCCTCCTCAGTGCAAAGGATTTCAGTGGCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR-3UTR CAA 90 bp TCTAGGACAAAAAGGAACAGGGTGATGAATCCTGCTGACAGACTTGACTGGTACTTCAGTCCATGTCAGTaGCTGCTCCTTGTGTCTAAT +
Preference number: 3 (lower is better)
Translates to: SRTKRNRVMNPADRLDWYFSPCQ*LLLVSN
Trigger: ATTAGACACAAGGAGCAGCAACTGACATGGACTGAA...GTACCAGTCAAGTCTGTCAGCAGGATTCATCACCCTGTTCCTTTTTGTCCTAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR-3UTR CAA 90 bp TCCTTAGCAAAATGCCCACAGAGATTATGTTCATTGCCAGTGGCAACCTCCACTTTCAGTCCATGTCAGTaGCTGCTCCTTGTGTCTAAT +
Preference number: 3 (lower is better)
Translates to: SLAKCPQRLCSLPVATSTFSPCQ*LLLVSN
Trigger: ATTAGACACAAGGAGCAGCAACTGACATGGACTGAA...AGTGGAGGTTGCCACTGGCAATGAACATAATCTCTGTGGGCATTTTGCTAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR-3UTR CAA 90 bp ATCCTGCTGACAGACTTGACTGGTACATGGTCCATTCCTAAAGAATCTCCTGATCCCTGTCTAATCTCATaGGTGTGGTTTGCACACAGT +
Preference number: 3 (lower is better)
Translates to: ILLTDLTGTWSIPKESPDPCLIS*VWFAHS
Trigger: ACTGTGTGCAAACCACACCAATGAGATTAGACAGGG...ATCAGGAGATTCTTTAGGAATGGACCATGTACCAGTCAAGTCTGTCAGCAGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR-3UTR CAA 90 bp ATCCTGCTGACAGACTTGACTGGTACATGGTCCATTCCTAAAGAATCTCCTGATCAGAGATTATGTTCATaGCCAGTGGCAACCTCCACT +
Preference number: 3 (lower is better)
Translates to: ILLTDLTGTWSIPKESPDQRLCS*PVATST
Trigger: AGTGGAGGTTGCCACTGGCAATGAACATAATCTCTG...ATCAGGAGATTCTTTAGGAATGGACCATGTACCAGTCAAGTCTGTCAGCAGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR GCA 72 bp TTTGCACACAGTACATGTTCAGTCCATGTCAGTTGCTaGTCCTTGTGTCTAATCTCCTTGTTGGGATTGTGG +
Preference number: 3 (lower is better)
Translates to: FAHSTCSVHVSC*SLCLISLLGLW
Trigger: CCACAATCCCAACAAGGAGATTAGACACAAGGAGCAGCAACTGACATGGACTGAACATGTACTGTGTGCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR GCA 72 bp TGGTTTGCACACAGTACATGTTCAGTCCATGTCAGTTaGTGCTCCTTGTGTCTAATCTCCTTGTTGGGATTG +
Preference number: 3 (lower is better)
Translates to: WFAHSTCSVHVS*CSLCLISLLGL
Trigger: CAATCCCAACAAGGAGATTAGACACAAGGAGCAGCAACTGACATGGACTGAACATGTACTGTGTGCAAACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR-3UTR CAA 90 bp GCATTTTCTGAGAGTACAATGATTGGGCTGAAGGTGAGTCTGCTGGGTGGTGATTCATGTCTAGTCTCATaGTATGTTACGACTTTGCAG +
Preference number: 3 (lower is better)
Translates to: AFSESTMIGLKVSLLGGDSCLVS*YVTTLQ
Trigger: CTGCAAAGTCGTAACATACAATGAGACTAGACATGA...ATCACCACCCAGCAGACTCACCTTCAGCCCAATCATTGTACTCTCAGAAAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR TCA 72 bp GGAAAGTTCAGTATGATGGCTGTAACACACCTCCCATaGTGCTGTAAACCACGCACTGACAAACTTATCGTT +
Preference number: 3 (lower is better)
Translates to: GKFSMMAVTHLP*CCKPRTDKLIV
Trigger: AACGATAAGTTTGTCAGTGCGTGGTTTACAGCATCATGGGAGGTGTGTTACAGCCATCATACTGAACTTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR-3UTR CAA 90 bp TCCTTAGCAAAATGCCCACAGAGATTATGTTCATTGCCAGTGGCAACCTCCACTTCATGTCTAGTCTCATaGTATGTTACGACTTTGCAG +
Preference number: 3 (lower is better)
Translates to: SLAKCPQRLCSLPVATSTSCLVS*YVTTLQ
Trigger: CTGCAAAGTCGTAACATACAATGAGACTAGACATGA...AGTGGAGGTTGCCACTGGCAATGAACATAATCTCTGTGGGCATTTTGCTAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR-3UTR CAA 90 bp CATGATGCTGTAAACCACGCACTGACAAACTTATCGTTACATTTCCATTGTGTCCCCTGTCTAATCTCATaGGTGTGGTTTGCACACAGT +
Preference number: 3 (lower is better)
Translates to: HDAVNHALTNLSLHFHCVPCLIS*VWFAHS
Trigger: ACTGTGTGCAAACCACACCAATGAGATTAGACAGGG...GACACAATGGAAATGTAACGATAAGTTTGTCAGTGCGTGGTTTACAGCATCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR-3UTR CAA 90 bp CTTGGGGTCACTGAGAATCTGAGGTTAAATTTCCCAGATTATAACCAAGAACAGCTGAGGAGGCAAAAATaGACACCTCAGGATTACCCA +
Preference number: 3 (lower is better)
Translates to: LGVTENLRLNFPDYNQEQLRRQK*TPQDYP
Trigger: TGGGTAATCCTGAGGTGTCAATTTTTGCCTCCTCAG...CTGTTCTTGGTTATAATCTGGGAAATTTAACCTCAGATTCTCAGTGACCCCAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR-3UTR CAA 90 bp CTTGGGGTCACTGAGAATCTGAGGTTAAATTTCCCAGATTATAACCAAGAACAGTTGTGTCTAATCTCCTaGTTGGGATTGTGGACACAG +
Preference number: 3 (lower is better)
Translates to: LGVTENLRLNFPDYNQEQLCLIS*LGLWTQ
Trigger: CTGTGTCCACAATCCCAACAAGGAGATTAGACACAA...CTGTTCTTGGTTATAATCTGGGAAATTTAACCTCAGATTCTCAGTGACCCCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR-3UTR CAA 90 bp TCTAGGACAAAAAGGAACAGGGTGATGAATCCTGCTGACAGACTTGACTGGTACTTCTATAGCCGTTGGTaGTTGTTGTTGTTGTTTTGT +
Preference number: 3 (lower is better)
Translates to: SRTKRNRVMNPADRLDWYFYSRW*LLLLFC
Trigger: ACAAAACAACAACAACAACAACCAACGGCTATAGAA...GTACCAGTCAAGTCTGTCAGCAGGATTCATCACCCTGTTCCTTTTTGTCCTAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR-3UTR CAA 90 bp CAGGAGTCTTTCATCCAAAGAACAGGGATGAAAAAGTGTGGGTATTTCTCTAATCTGAGGAGGCAAAAATaGACACCTCAGGATTACCCA +
Preference number: 3 (lower is better)
Translates to: QESFIQRTGMKKCGYFSNLRRQK*TPQDYP
Trigger: TGGGTAATCCTGAGGTGTCAATTTTTGCCTCCTCAG...ATTAGAGAAATACCCACACTTTTTCATCCCTGTTCTTTGGATGAAAGACTCCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR-3UTR CAA 90 bp TCCCTCCAAATAAACTGTTCAATATCACTTCTCCATTCTTATCGTGTGCACAGTCAGAGATTATGTTCATaGCCAGTGGCAACCTCCACT +
Preference number: 3 (lower is better)
Translates to: SLQINCSISLLHSYRVHSQRLCS*PVATST
Trigger: AGTGGAGGTTGCCACTGGCAATGAACATAATCTCTG...ACTGTGCACACGATAAGAATGGAGAAGTGATATTGAACAGTTTATTTGGAGGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR-3UTR CAA 90 bp CAGGAGTCTTTCATCCAAAGAACAGGGATGAAAAAGTGTGGGTATTTCTCTAATTCTCATTGGTGTGGTTaGCACACAGTACATGTTCAG +
Preference number: 3 (lower is better)
Translates to: QESFIQRTGMKKCGYFSNSHWCG*HTVHVQ
Trigger: CTGAACATGTACTGTGTGCAAACCACACCAATGAGA...ATTAGAGAAATACCCACACTTTTTCATCCCTGTTCTTTGGATGAAAGACTCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR-3UTR CAA 90 bp ATCCTGCTGACAGACTTGACTGGTACATGGTCCATTCCTAAAGAATCTCCTGATATCGTTACATTTCCATaGTGTCTAAGAGTCTTCTTC +
Preference number: 3 (lower is better)
Translates to: ILLTDLTGTWSIPKESPDIVTFP*CLRVFF
Trigger: GAAGAAGACTCTTAGACACAATGGAAATGTAACGAT...ATCAGGAGATTCTTTAGGAATGGACCATGTACCAGTCAAGTCTGTCAGCAGGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR-3UTR CAA 90 bp CTTGGGGTCACTGAGAATCTGAGGTTAAATTTCCCAGATTATAACCAAGAACAGTCATGTCTAGTCTCATaGTATGTTACGACTTTGCAG +
Preference number: 3 (lower is better)
Translates to: LGVTENLRLNFPDYNQEQSCLVS*YVTTLQ
Trigger: CTGCAAAGTCGTAACATACAATGAGACTAGACATGA...CTGTTCTTGGTTATAATCTGGGAAATTTAACCTCAGATTCTCAGTGACCCCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR-3UTR CAA 90 bp CATGATGCTGTAAACCACGCACTGACAAACTTATCGTTACATTTCCATTGTGTCTTCTATAGCCGTTGGTaGTTGTTGTTGTTGTTTTGT +
Preference number: 3 (lower is better)
Translates to: HDAVNHALTNLSLHFHCVFYSRW*LLLLFC
Trigger: ACAAAACAACAACAACAACAACCAACGGCTATAGAA...GACACAATGGAAATGTAACGATAAGTTTGTCAGTGCGTGGTTTACAGCATCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR-3UTR CAA 90 bp CTTGGGGTCACTGAGAATCTGAGGTTAAATTTCCCAGATTATAACCAAGAACAGATCGTTACATTTCCATaGTGTCTAAGAGTCTTCTTC +
Preference number: 3 (lower is better)
Translates to: LGVTENLRLNFPDYNQEQIVTFP*CLRVFF
Trigger: GAAGAAGACTCTTAGACACAATGGAAATGTAACGAT...CTGTTCTTGGTTATAATCTGGGAAATTTAACCTCAGATTCTCAGTGACCCCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR-3UTR CAA 90 bp CAGGAGTCTTTCATCCAAAGAACAGGGATGAAAAAGTGTGGGTATTTCTCTAATATCGTTACATTTCCATaGTGTCTAAGAGTCTTCTTC +
Preference number: 3 (lower is better)
Translates to: QESFIQRTGMKKCGYFSNIVTFP*CLRVFF
Trigger: GAAGAAGACTCTTAGACACAATGGAAATGTAACGAT...ATTAGAGAAATACCCACACTTTTTCATCCCTGTTCTTTGGATGAAAGACTCCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR CCA 72 bp TTTCCATTGTGTCTAAGAGTCTTCTTCTATAGCCGTTaGTTGTTGTTGTTGTTGTTTTGTTGTTTGTTTGTT +
Preference number: 3 (lower is better)
Translates to: FPLCLRVFFYSR*LLLLLFCCLFV
Trigger: AACAAACAAACAACAAAACAACAACAACAACAACCAACGGCTATAGAAGAAGACTCTTAGACACAATGGAAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR GCA 90 bp GTGTCTAATCTCCTTGTTGGGATTGTGGACACAGTAGGTGTCGAGCGGATATCACCCCACCCCACCGCGTaGTCTCGGGCTGGTGCGTCC +
Preference number: 4 (lower is better)
Translates to: VSNLLVGIVDTVGVERISPHPTA*SRAGAS
Trigger: GGACGCACCAGCCCGAGAGCACGCGGTGGGGTGGGG...TGATATCCGCTCGACACCTACTGTGTCCACAATCCCAACAAGGAGATTAGACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678254.1
CDS-3UTR GCA 90 bp GTGTCTAATCTCCTTGTTGGGATTGTGGACACAGTAGGTGTCGAGCGGATATCAAGCGTCTCGGACCTGTaGGCCCCGCCCCGCGCTGGA +
Preference number: 4 (lower is better)
Translates to: VSNLLVGIVDTVGVERISSVSDL*APPRAG
Trigger: TCCAGCGCGGGGCGGGGCGCACAGGTCCGAGACGCT...TGATATCCGCTCGACACCTACTGTGTCCACAATCCCAACAAGGAGATTAGACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678254.1
CDS-3UTR GCA 90 bp GAGCCACTGAAATCCTTTGCACTGAGGAGGCAAAAATTGACACCTCAGGATTACGTGCTCTCGGGCTGGTaGGTCCAGGGCGCGGGCACC +
Preference number: 4 (lower is better)
Translates to: EPLKSFALRRQKLTPQDYVLSGW*VQGAGT
Trigger: GGTGCCCGCGCCCTGGACGCACCAGCCCGAGAGCAC...GTAATCCTGAGGTGTCAATTTTTGCCTCCTCAGTGCAAAGGATTTCAGTGGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678254.1
CDS-3UTR CCA 90 bp AGAACAGGGATCCCTTTTTGGCCCACTGTAGACAAGGTACACTGTGAAGTCTTCGAGTCACAGTGTGGTTaGGCGCAGGCGGGCCGCTCG +
Preference number: 4 (lower is better)
Translates to: RTGIPFWPTVDKVHCEVFESQCG*AQAGRS
Trigger: CGAGCGGCCCGCCTGCGCCCAACCACACTGTGACTC...GAAGACTTCACAGTGTACCTTGTCTACAGTGGGCCAAAAAGGGATCCCTGTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CCA 90 bp GTGTCTAATCTCCTTGTTGGGATTGTGGACACAGTAGGTGTCGAGCGGATATCAGAGTCACAGTGTGGTTaGGCGCAGGCGGGCCGCTCG +
Preference number: 4 (lower is better)
Translates to: VSNLLVGIVDTVGVERISESQCG*AQAGRS
Trigger: CGAGCGGCCCGCCTGCGCCCAACCACACTGTGACTC...TGATATCCGCTCGACACCTACTGTGTCCACAATCCCAACAAGGAGATTAGACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678059.1
ENST00000678254.1
CDS-3UTR GCA 90 bp GCATTTTCTGAGAGTACAATGATTGGGCTGAAGGTGAGTCTGCTGGGTGGTGATACCCGGACTTGCACTTaGAGAGCCGCTGCGTGGGGG +
Preference number: 4 (lower is better)
Translates to: AFSESTMIGLKVSLLGGDTRTCT*RAAAWG
Trigger: CCCCCACGCAGCGGCTCTGCAAGTGCAAGTCCGGGT...ATCACCACCCAGCAGACTCACCTTCAGCCCAATCATTGTACTCTCAGAAAATGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678059.1
ENST00000678254.1
CDS-3UTR GCA 90 bp TCCTTAGCAAAATGCCCACAGAGATTATGTTCATTGCCAGTGGCAACCTCCACTACCCGGACTTGCACTTaGAGAGCCGCTGCGTGGGGG +
Preference number: 4 (lower is better)
Translates to: SLAKCPQRLCSLPVATSTTRTCT*RAAAWG
Trigger: CCCCCACGCAGCGGCTCTGCAAGTGCAAGTCCGGGT...AGTGGAGGTTGCCACTGGCAATGAACATAATCTCTGTGGGCATTTTGCTAAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CCA 90 bp ATCCTGCTGACAGACTTGACTGGTACATGGTCCATTCCTAAAGAATCTCCTGATGACTTGCTCCCCCGCTaGGAGGGACGCCAGTGCAGC +
Preference number: 4 (lower is better)
Translates to: ILLTDLTGTWSIPKESPDDLLPR*EGRQCS
Trigger: GCTGCACTGGCGTCCCTCCCAGCGGGGGAGCAAGTC...ATCAGGAGATTCTTTAGGAATGGACCATGTACCAGTCAAGTCTGTCAGCAGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CCA 90 bp AGAACAGGGATCCCTTTTTGGCCCACTGTAGACAAGGTACACTGTGAAGTCTTCGGTCAAGGTCAGCACTaGACTTGCTCCCCCGCTGGG +
Preference number: 4 (lower is better)
Translates to: RTGIPFWPTVDKVHCEVFGQGQH*TCSPAG
Trigger: CCCAGCGGGGGAGCAAGTCCAGTGCTGACCTTGACC...GAAGACTTCACAGTGTACCTTGTCTACAGTGGGCCAAAAAGGGATCCCTGTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CCA 90 bp GAGCCACTGAAATCCTTTGCACTGAGGAGGCAAAAATTGACACCTCAGGATTACGGTTCCAGCTGGAGTTaGCGCTCCGGCCCCACAGCT +
Preference number: 4 (lower is better)
Translates to: EPLKSFALRRQKLTPQDYGSSWS*RSGPTA
Trigger: AGCTGTGGGGCCGGAGCGCCAACTCCAGCTGGAACC...GTAATCCTGAGGTGTCAATTTTTGCCTCCTCAGTGCAAAGGATTTCAGTGGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CCA 90 bp TCTAGGACAAAAAGGAACAGGGTGATGAATCCTGCTGACAGACTTGACTGGTACTCTCTGGGTTCCAGCTaGAGTTGGCGCTCCGGCCCC +
Preference number: 4 (lower is better)
Translates to: SRTKRNRVMNPADRLDWYSLGSS*SWRSGP
Trigger: GGGGCCGGAGCGCCAACTCCAGCTGGAACCCAGAGA...GTACCAGTCAAGTCTGTCAGCAGGATTCATCACCCTGTTCCTTTTTGTCCTAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CCA 90 bp TCTAGGACAAAAAGGAACAGGGTGATGAATCCTGCTGACAGACTTGACTGGTACTCGAGAGTCACAGTGTaGTTGGGCGCAGGCGGGCCG +
Preference number: 4 (lower is better)
Translates to: SRTKRNRVMNPADRLDWYSRVTV*LGAGGP
Trigger: CGGCCCGCCTGCGCCCAACCACACTGTGACTCTCGA...GTACCAGTCAAGTCTGTCAGCAGGATTCATCACCCTGTTCCTTTTTGTCCTAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000678059.1
ENST00000678254.1
CDS-3UTR TCA 90 bp AGAACAGGGATCCCTTTTTGGCCCACTGTAGACAAGGTACACTGTGAAGTCTTCCAGCATTCAGCTTCTTaGGGGCACGGGGGAGGCATG +
Preference number: 4 (lower is better)
Translates to: RTGIPFWPTVDKVHCEVFQHSAS*GHGGGM
Trigger: CATGCCTCCCCCGTGCCCTCAAGAAGCTGAATGCTG...GAAGACTTCACAGTGTACCTTGTCTACAGTGGGCCAAAAAGGGATCCCTGTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR TCA 90 bp TCTAGGACAAAAAGGAACAGGGTGATGAATCCTGCTGACAGACTTGACTGGTACTCTGGGCTGCCATGGTaGTGTCTGTCTCGGCGCCTC +
Preference number: 4 (lower is better)
Translates to: SRTKRNRVMNPADRLDWYSGLPW*CLSRRL
Trigger: GAGGCGCCGAGACAGACATCACCATGGCAGCCCAGA...GTACCAGTCAAGTCTGTCAGCAGGATTCATCACCCTGTTCCTTTTTGTCCTAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678254.1
CDS-3UTR GCA 90 bp AGAACAGGGATCCCTTTTTGGCCCACTGTAGACAAGGTACACTGTGAAGTCTTCAGCCGCTTGCGAATCTaGTCCGTCTGGAACCCAGGG +
Preference number: 4 (lower is better)
Translates to: RTGIPFWPTVDKVHCEVFSRLRI*SVWNPG
Trigger: CCCTGGGTTCCAGACGGAGCAGATTCGCAAGCGGCT...GAAGACTTCACAGTGTACCTTGTCTACAGTGGGCCAAAAAGGGATCCCTGTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR GCA 90 bp GCATTTTCTGAGAGTACAATGATTGGGCTGAAGGTGAGTCTGCTGGGTGGTGATAGCCGCTTGCGAATCTaGTCCGTCTGGAACCCAGGG +
Preference number: 4 (lower is better)
Translates to: AFSESTMIGLKVSLLGGDSRLRI*SVWNPG
Trigger: CCCTGGGTTCCAGACGGAGCAGATTCGCAAGCGGCT...ATCACCACCCAGCAGACTCACCTTCAGCCCAATCATTGTACTCTCAGAAAATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR GCA 90 bp TTGCTGCTCCTTGTGTCTAATCTCCTTGTTGGGATTGTGGACACAGTAGGTGTCTTCTGTGCGCTCTGCTaGTCCGGAAGCCGGATCGAG +
Preference number: 4 (lower is better)
Translates to: LLLLVSNLLVGIVDTVGVFCALC*SGSRIE
Trigger: CTCGATCCGGCTTCCGGAGCAGCAGAGCGCACAGAA...GACACCTACTGTGTCCACAATCCCAACAAGGAGATTAGACACAAGGAGCAGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CCA 90 bp AGAACAGGGATCCCTTTTTGGCCCACTGTAGACAAGGTACACTGTGAAGTCTTCCGCATATCTCGAGAGTaGCGGGAGGCAAAGCAGCCG +
Preference number: 4 (lower is better)
Translates to: RTGIPFWPTVDKVHCEVFRISRE*REAKQP
Trigger: CGGCTGCTTTGCCTCCCGCCACTCTCGAGATATGCG...GAAGACTTCACAGTGTACCTTGTCTACAGTGGGCCAAAAAGGGATCCCTGTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000217270.4
CDS-3UTR CCA 90 bp ATCCTGCTGACAGACTTGACTGGTACATGGTCCATTCCTAAAGAATCTCCTGATAGTCCAGGCCAAGGGTaGATGCCCAGCTCCCCCACC +
Preference number: 4 (lower is better)
Translates to: ILLTDLTGTWSIPKESPDSPGQG*MPSSPT
Trigger: GGTGGGGGAGCTGGGCATCCACCCTTGGCCTGGACT...ATCAGGAGATTCTTTAGGAATGGACCATGTACCAGTCAAGTCTGTCAGCAGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678254.1
CDS-3UTR CCA 90 bp TTGCTGCTCCTTGTGTCTAATCTCCTTGTTGGGATTGTGGACACAGTAGGTGTCGCGTGTCAGGGTCTCTaGGTTCCAGCTGGAGTTGGC +
Preference number: 4 (lower is better)
Translates to: LLLLVSNLLVGIVDTVGVACQGL*VPAGVG
Trigger: GCCAACTCCAGCTGGAACCCAGAGACCCTGACACGC...GACACCTACTGTGTCCACAATCCCAACAAGGAGATTAGACACAAGGAGCAGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678059.1
ENST00000678254.1
CDS-3UTR GCA 90 bp GAGCCACTGAAATCCTTTGCACTGAGGAGGCAAAAATTGACACCTCAGGATTACAGCCGCTTGCGAATCTaGTCCGTCTGGAACCCAGGG +
Preference number: 4 (lower is better)
Translates to: EPLKSFALRRQKLTPQDYSRLRI*SVWNPG
Trigger: CCCTGGGTTCCAGACGGAGCAGATTCGCAAGCGGCT...GTAATCCTGAGGTGTCAATTTTTGCCTCCTCAGTGCAAAGGATTTCAGTGGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR GCA 90 bp CAGGAGTCTTTCATCCAAAGAACAGGGATGAAAAAGTGTGGGTATTTCTCTAATCCCGGGGTCCCCGCCTaGCTCCTAGTCCAGGCCAAG +
Preference number: 4 (lower is better)
Translates to: QESFIQRTGMKKCGYFSNPGVPA*LLVQAK
Trigger: CTTGGCCTGGACTAGGAGGCAGGCGGGGACCCCGGG...ATTAGAGAAATACCCACACTTTTTCATCCCTGTTCTTTGGATGAAAGACTCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000678254.1
CDS-3UTR GCA 90 bp GAGCCACTGAAATCCTTTGCACTGAGGAGGCAAAAATTGACACCTCAGGATTACCACTTGCAGAGCCGCTaGGTGGGGGATGTCCCTCTT +
Preference number: 4 (lower is better)
Translates to: EPLKSFALRRQKLTPQDYHLQSR*VGDVPL
Trigger: AAGAGGGACATCCCCCACGCAGCGGCTCTGCAAGTG...GTAATCCTGAGGTGTCAATTTTTGCCTCCTCAGTGCAAAGGATTTCAGTGGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000678059.1
ENST00000678254.1
CDS-3UTR GCA 90 bp TCTAGGACAAAAAGGAACAGGGTGATGAATCCTGCTGACAGACTTGACTGGTACCCTTTCTGTGCGCTCTaGTGCTCCGGAAGCCGGATC +
Preference number: 4 (lower is better)
Translates to: SRTKRNRVMNPADRLDWYPFCAL*CSGSRI
Trigger: GATCCGGCTTCCGGAGCAGCAGAGCGCACAGAAAGG...GTACCAGTCAAGTCTGTCAGCAGGATTCATCACCCTGTTCCTTTTTGTCCTAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CCA 90 bp CATGATGCTGTAAACCACGCACTGACAAACTTATCGTTACATTTCCATTGTGTCGACTTGCTCCCCCGCTaGGAGGGACGCCAGTGCAGC +
Preference number: 4 (lower is better)
Translates to: HDAVNHALTNLSLHFHCVDLLPR*EGRQCS
Trigger: GCTGCACTGGCGTCCCTCCCAGCGGGGGAGCAAGTC...GACACAATGGAAATGTAACGATAAGTTTGTCAGTGCGTGGTTTACAGCATCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CCA 90 bp GCATTTTCTGAGAGTACAATGATTGGGCTGAAGGTGAGTCTGCTGGGTGGTGATAGCCTCCTGAGTAACTaGGATTACAGGCGCCCGCCA +
Preference number: 4 (lower is better)
Translates to: AFSESTMIGLKVSLLGGDSLLSN*DYRRPP
Trigger: TGGCGGGCGCCTGTAATCCCAGTTACTCAGGAGGCT...ATCACCACCCAGCAGACTCACCTTCAGCCCAATCATTGTACTCTCAGAAAATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CCA 90 bp TTGCTGCTCCTTGTGTCTAATCTCCTTGTTGGGATTGTGGACACAGTAGGTGTCAGCCTCCTGAGTAACTaGGATTACAGGCGCCCGCCA +
Preference number: 4 (lower is better)
Translates to: LLLLVSNLLVGIVDTVGVSLLSN*DYRRPP
Trigger: TGGCGGGCGCCTGTAATCCCAGTTACTCAGGAGGCT...GACACCTACTGTGTCCACAATCCCAACAAGGAGATTAGACACAAGGAGCAGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CCA 90 bp TTGCTGCTCCTTGTGTCTAATCTCCTTGTTGGGATTGTGGACACAGTAGGTGTCGTGATCTGCCCATCTTaGCCTCCCGAAGTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: LLLLVSNLLVGIVDTVGVVICPS*PPEVLG
Trigger: TCCCAGCACTTCGGGAGGCCAAGATGGGCAGATCAC...GACACCTACTGTGTCCACAATCCCAACAAGGAGATTAGACACAAGGAGCAGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CCA 90 bp GAGCCACTGAAATCCTTTGCACTGAGGAGGCAAAAATTGACACCTCAGGATTACGCGTGTCAGGGTCTCTaGGTTCCAGCTGGAGTTGGC +
Preference number: 4 (lower is better)
Translates to: EPLKSFALRRQKLTPQDYACQGL*VPAGVG
Trigger: GCCAACTCCAGCTGGAACCCAGAGACCCTGACACGC...GTAATCCTGAGGTGTCAATTTTTGCCTCCTCAGTGCAAAGGATTTCAGTGGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000678059.1
ENST00000678254.1
CDS-3UTR TCA 90 bp TTGCTGCTCCTTGTGTCTAATCTCCTTGTTGGGATTGTGGACACAGTAGGTGTCCCTGCTTCAGCCTCCTaGGTAACTGGGATTACAGGC +
Preference number: 4 (lower is better)
Translates to: LLLLVSNLLVGIVDTVGVPASAS*VTGITG
Trigger: GCCTGTAATCCCAGTTACTCAGGAGGCTGAAGCAGG...GACACCTACTGTGTCCACAATCCCAACAAGGAGATTAGACACAAGGAGCAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR GCA 90 bp TTGCTGCTCCTTGTGTCTAATCTCCTTGTTGGGATTGTGGACACAGTAGGTGTCTGGGAGGGACGCCAGTaGAGCAGCATCATCTTCTTG +
Preference number: 4 (lower is better)
Translates to: LLLLVSNLLVGIVDTVGVWEGRQ*SSIIFL
Trigger: CAAGAAGATGATGCTGCTGCACTGGCGTCCCTCCCA...GACACCTACTGTGTCCACAATCCCAACAAGGAGATTAGACACAAGGAGCAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR GCA 90 bp ATCCTGCTGACAGACTTGACTGGTACATGGTCCATTCCTAAAGAATCTCCTGATCACTTGCAGAGCCGCTaGGTGGGGGATGTCCCTCTT +
Preference number: 4 (lower is better)
Translates to: ILLTDLTGTWSIPKESPDHLQSR*VGDVPL
Trigger: AAGAGGGACATCCCCCACGCAGCGGCTCTGCAAGTG...ATCAGGAGATTCTTTAGGAATGGACCATGTACCAGTCAAGTCTGTCAGCAGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CCA 90 bp TTGCTGCTCCTTGTGTCTAATCTCCTTGTTGGGATTGTGGACACAGTAGGTGTCATGGTGATGTCTGCTTaGAGCCAGCCCCGACGCATA +
Preference number: 4 (lower is better)
Translates to: LLLLVSNLLVGIVDTVGVMVMSA*SQPRRI
Trigger: TATGCGTCGGGGCTGGCTCCAAGCAGACATCACCAT...GACACCTACTGTGTCCACAATCCCAACAAGGAGATTAGACACAAGGAGCAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217270.4
CDS-3UTR CCA 90 bp TCTAGGACAAAAAGGAACAGGGTGATGAATCCTGCTGACAGACTTGACTGGTACCCAGCAAGGCATTGGTaGAGACGTAGAGGGAGACGG +
Preference number: 4 (lower is better)
Translates to: SRTKRNRVMNPADRLDWYPARHW*RRRGRR
Trigger: CCGTCTCCCTCTACGTCTCCACCAATGCCTTGCTGG...GTACCAGTCAAGTCTGTCAGCAGGATTCATCACCCTGTTCCTTTTTGTCCTAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CCA 90 bp TTGCTGCTCCTTGTGTCTAATCTCCTTGTTGGGATTGTGGACACAGTAGGTGTCTGGCCAGCAAGGCATTaGTGGAGACGTAGAGGGAGA +
Preference number: 4 (lower is better)
Translates to: LLLLVSNLLVGIVDTVGVWPARH*WRRRGR
Trigger: TCTCCCTCTACGTCTCCACCAATGCCTTGCTGGCCA...GACACCTACTGTGTCCACAATCCCAACAAGGAGATTAGACACAAGGAGCAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CCA 90 bp TCCTTAGCAAAATGCCCACAGAGATTATGTTCATTGCCAGTGGCAACCTCCACTCGAATCTGCTCCGTCTaGAACCCAGGGACTGCCTTG +
Preference number: 4 (lower is better)
Translates to: SLAKCPQRLCSLPVATSTRICSV*NPGTAL
Trigger: CAAGGCAGTCCCTGGGTTCCAGACGGAGCAGATTCG...AGTGGAGGTTGCCACTGGCAATGAACATAATCTCTGTGGGCATTTTGCTAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CCA 90 bp TCCTTAGCAAAATGCCCACAGAGATTATGTTCATTGCCAGTGGCAACCTCCACTGTGATCTGCCCATCTTaGCCTCCCGAAGTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: SLAKCPQRLCSLPVATSTVICPS*PPEVLG
Trigger: TCCCAGCACTTCGGGAGGCCAAGATGGGCAGATCAC...AGTGGAGGTTGCCACTGGCAATGAACATAATCTCTGTGGGCATTTTGCTAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR TCA 90 bp TTGCTGCTCCTTGTGTCTAATCTCCTTGTTGGGATTGTGGACACAGTAGGTGTCCCAGTGCAATGCCAATaGCGATCTTGGCTGCGAAGA +
Preference number: 4 (lower is better)
Translates to: LLLLVSNLLVGIVDTVGVPVQCQ*RSWLRR
Trigger: TCTTCGCAGCCAAGATCGTCATTGGCATTGCACTGG...GACACCTACTGTGTCCACAATCCCAACAAGGAGATTAGACACAAGGAGCAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR TCA 90 bp CTTGGGGTCACTGAGAATCTGAGGTTAAATTTCCCAGATTATAACCAAGAACAGCGGTGCGCAGGTAGTTaGCGGAGGCACAGAGCACGT +
Preference number: 4 (lower is better)
Translates to: LGVTENLRLNFPDYNQEQRCAGS*RRHRAR
Trigger: ACGTGCTCTGTGCCTCCGTCAACTACCTGCGCACCG...CTGTTCTTGGTTATAATCTGGGAAATTTAACCTCAGATTCTCAGTGACCCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR TCA 90 bp TCTAGGACAAAAAGGAACAGGGTGATGAATCCTGCTGACAGACTTGACTGGTACCCTGCTTCAGCCTCCTaGGTAACTGGGATTACAGGC +
Preference number: 4 (lower is better)
Translates to: SRTKRNRVMNPADRLDWYPASAS*VTGITG
Trigger: GCCTGTAATCCCAGTTACTCAGGAGGCTGAAGCAGG...GTACCAGTCAAGTCTGTCAGCAGGATTCATCACCCTGTTCCTTTTTGTCCTAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CCA 90 bp TTGCTGCTCCTTGTGTCTAATCTCCTTGTTGGGATTGTGGACACAGTAGGTGTCGAGAGGGAGGAGGCATaGTCTTGGGGTGGATTAAAG +
Preference number: 4 (lower is better)
Translates to: LLLLVSNLLVGIVDTVGVEREEA*SWGGLK
Trigger: CTTTAATCCACCCCAAGACCATGCCTCCTCCCTCTC...GACACCTACTGTGTCCACAATCCCAACAAGGAGATTAGACACAAGGAGCAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217270.4
ENST00000678254.1
CDS-3UTR CCA 90 bp ATCCTGCTGACAGACTTGACTGGTACATGGTCCATTCCTAAAGAATCTCCTGATCCAGCAAGGCATTGGTaGAGACGTAGAGGGAGACGG +
Preference number: 4 (lower is better)
Translates to: ILLTDLTGTWSIPKESPDPARHW*RRRGRR
Trigger: CCGTCTCCCTCTACGTCTCCACCAATGCCTTGCTGG...ATCAGGAGATTCTTTAGGAATGGACCATGTACCAGTCAAGTCTGTCAGCAGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CCA 90 bp TTGCTGCTCCTTGTGTCTAATCTCCTTGTTGGGATTGTGGACACAGTAGGTGTCAGGGTTTCACCATGTTaGCCAGCCTGGGTTGAACTC +
Preference number: 4 (lower is better)
Translates to: LLLLVSNLLVGIVDTVGVRVSPC*PAWVEL
Trigger: GAGTTCAACCCAGGCTGGCCAACATGGTGAAACCCT...GACACCTACTGTGTCCACAATCCCAACAAGGAGATTAGACACAAGGAGCAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CCA 90 bp GCATTTTCTGAGAGTACAATGATTGGGCTGAAGGTGAGTCTGCTGGGTGGTGATAGGGTTTCACCATGTTaGCCAGCCTGGGTTGAACTC +
Preference number: 4 (lower is better)
Translates to: AFSESTMIGLKVSLLGGDRVSPC*PAWVEL
Trigger: GAGTTCAACCCAGGCTGGCCAACATGGTGAAACCCT...ATCACCACCCAGCAGACTCACCTTCAGCCCAATCATTGTACTCTCAGAAAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CCA 90 bp TTGCTGCTCCTTGTGTCTAATCTCCTTGTTGGGATTGTGGACACAGTAGGTGTCGGAGGCAGTAGGAGGTaGGTGGGAAAGTTCAGTATG +
Preference number: 4 (lower is better)
Translates to: LLLLVSNLLVGIVDTVGVGGSRR*VGKFSM
Trigger: CATACTGAACTTTCCCACCCACCTCCTACTGCCTCC...GACACCTACTGTGTCCACAATCCCAACAAGGAGATTAGACACAAGGAGCAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CCA 90 bp CAGGAGTCTTTCATCCAAAGAACAGGGATGAAAAAGTGTGGGTATTTCTCTAATGGTTCCAGCTGGAGTTaGCGCTCCGGCCCCACAGCT +
Preference number: 4 (lower is better)
Translates to: QESFIQRTGMKKCGYFSNGSSWS*RSGPTA
Trigger: AGCTGTGGGGCCGGAGCGCCAACTCCAGCTGGAACC...ATTAGAGAAATACCCACACTTTTTCATCCCTGTTCTTTGGATGAAAGACTCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CCA 90 bp CAGGAGTCTTTCATCCAAAGAACAGGGATGAAAAAGTGTGGGTATTTCTCTAATTCGAGAGTCACAGTGTaGTTGGGCGCAGGCGGGCCG +
Preference number: 4 (lower is better)
Translates to: QESFIQRTGMKKCGYFSNSRVTV*LGAGGP
Trigger: CGGCCCGCCTGCGCCCAACCACACTGTGACTCTCGA...ATTAGAGAAATACCCACACTTTTTCATCCCTGTTCTTTGGATGAAAGACTCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000678059.1
ENST00000678254.1
CDS-3UTR TCA 90 bp TCTAGGACAAAAAGGAACAGGGTGATGAATCCTGCTGACAGACTTGACTGGTACCCAGTGCAATGCCAATaGCGATCTTGGCTGCGAAGA +
Preference number: 4 (lower is better)
Translates to: SRTKRNRVMNPADRLDWYPVQCQ*RSWLRR
Trigger: TCTTCGCAGCCAAGATCGTCATTGGCATTGCACTGG...GTACCAGTCAAGTCTGTCAGCAGGATTCATCACCCTGTTCCTTTTTGTCCTAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR TCA 90 bp TCCTTAGCAAAATGCCCACAGAGATTATGTTCATTGCCAGTGGCAACCTCCACTCCAGTGCAATGCCAATaGCGATCTTGGCTGCGAAGA +
Preference number: 4 (lower is better)
Translates to: SLAKCPQRLCSLPVATSTPVQCQ*RSWLRR
Trigger: TCTTCGCAGCCAAGATCGTCATTGGCATTGCACTGG...AGTGGAGGTTGCCACTGGCAATGAACATAATCTCTGTGGGCATTTTGCTAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR TCA 90 bp GAGCCACTGAAATCCTTTGCACTGAGGAGGCAAAAATTGACACCTCAGGATTACTGGTGGGTGATGCTCTaGGTACTGGACTGGGGTTTT +
Preference number: 4 (lower is better)
Translates to: EPLKSFALRRQKLTPQDYWWVML*VLDWGF
Trigger: AAAACCCCAGTCCAGTACTCAGAGCATCACCCACCA...GTAATCCTGAGGTGTCAATTTTTGCCTCCTCAGTGCAAAGGATTTCAGTGGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR TCA 90 bp TCTAGGACAAAAAGGAACAGGGTGATGAATCCTGCTGACAGACTTGACTGGTACTGGTGGGTGATGCTCTaGGTACTGGACTGGGGTTTT +
Preference number: 4 (lower is better)
Translates to: SRTKRNRVMNPADRLDWYWWVML*VLDWGF
Trigger: AAAACCCCAGTCCAGTACTCAGAGCATCACCCACCA...GTACCAGTCAAGTCTGTCAGCAGGATTCATCACCCTGTTCCTTTTTGTCCTAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR TCA 90 bp TCCTTAGCAAAATGCCCACAGAGATTATGTTCATTGCCAGTGGCAACCTCCACTTGGTGGGTGATGCTCTaGGTACTGGACTGGGGTTTT +
Preference number: 4 (lower is better)
Translates to: SLAKCPQRLCSLPVATSTWWVML*VLDWGF
Trigger: AAAACCCCAGTCCAGTACTCAGAGCATCACCCACCA...AGTGGAGGTTGCCACTGGCAATGAACATAATCTCTGTGGGCATTTTGCTAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR TCA 90 bp GCATTTTCTGAGAGTACAATGATTGGGCTGAAGGTGAGTCTGCTGGGTGGTGATTTGGTTGATGGTGGGTaGTGCTCTGAGTACTGGACT +
Preference number: 4 (lower is better)
Translates to: AFSESTMIGLKVSLLGGDLVDGG*CSEYWT
Trigger: AGTCCAGTACTCAGAGCATCACCCACCATCAACCAA...ATCACCACCCAGCAGACTCACCTTCAGCCCAATCATTGTACTCTCAGAAAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR TCA 90 bp TGTCAGCTGATTTGGTTCATGTCTAGTCTCATTGTATGTTACGACTTTGCAGCACAGCATTCAGCTTCTTaGGGGCACGGGGGAGGCATG +
Preference number: 4 (lower is better)
Translates to: CQLIWFMSSLIVCYDFAAQHSAS*GHGGGM
Trigger: CATGCCTCCCCCGTGCCCTCAAGAAGCTGAATGCTG...TGCTGCAAAGTCGTAACATACAATGAGACTAGACATGAACCAAATCAGCTGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR TCA 90 bp CTTGGGGTCACTGAGAATCTGAGGTTAAATTTCCCAGATTATAACCAAGAACAGCAGCATTCAGCTTCTTaGGGGCACGGGGGAGGCATG +
Preference number: 4 (lower is better)
Translates to: LGVTENLRLNFPDYNQEQQHSAS*GHGGGM
Trigger: CATGCCTCCCCCGTGCCCTCAAGAAGCTGAATGCTG...CTGTTCTTGGTTATAATCTGGGAAATTTAACCTCAGATTCTCAGTGACCCCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR GCA 90 bp GTGTCTAATCTCCTTGTTGGGATTGTGGACACAGTAGGTGTCGAGCGGATATCAAATGACGATCTTGGCTaGGAAGAAGGTCCGGGTCTT +
Preference number: 4 (lower is better)
Translates to: VSNLLVGIVDTVGVERISNDDLG*EEGPGL
Trigger: AAGACCCGGACCTTCTTCGCAGCCAAGATCGTCATT...TGATATCCGCTCGACACCTACTGTGTCCACAATCCCAACAAGGAGATTAGACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR GCA 90 bp ATCCTGCTGACAGACTTGACTGGTACATGGTCCATTCCTAAAGAATCTCCTGATTGGGAGGGACGCCAGTaGAGCAGCATCATCTTCTTG +
Preference number: 4 (lower is better)
Translates to: ILLTDLTGTWSIPKESPDWEGRQ*SSIIFL
Trigger: CAAGAAGATGATGCTGCTGCACTGGCGTCCCTCCCA...ATCAGGAGATTCTTTAGGAATGGACCATGTACCAGTCAAGTCTGTCAGCAGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR GCA 90 bp TTGCTGCTCCTTGTGTCTAATCTCCTTGTTGGGATTGTGGACACAGTAGGTGTCTTCAAGCAATTCTCATaGCTCAGCCTCCTGAGGAGC +
Preference number: 4 (lower is better)
Translates to: LLLLVSNLLVGIVDTVGVFKQFS*LSLLRS
Trigger: GCTCCTCAGGAGGCTGAGGCATGAGAATTGCTTGAA...GACACCTACTGTGTCCACAATCCCAACAAGGAGATTAGACACAAGGAGCAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR GCA 90 bp CAGGAGTCTTTCATCCAAAGAACAGGGATGAAAAAGTGTGGGTATTTCTCTAATTCGAGGACCCGGACTTaGACTTGCAGAGCCGCTGCG +
Preference number: 4 (lower is better)
Translates to: QESFIQRTGMKKCGYFSNSRTRT*TCRAAA
Trigger: CGCAGCGGCTCTGCAAGTGCAAGTCCGGGTCCTCGA...ATTAGAGAAATACCCACACTTTTTCATCCCTGTTCTTTGGATGAAAGACTCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000678059.1
ENST00000678254.1
CDS-3UTR GCA 90 bp TCCCTCCAAATAAACTGTTCAATATCACTTCTCCATTCTTATCGTGTGCACAGTTCGAGGACCCGGACTTaGACTTGCAGAGCCGCTGCG +
Preference number: 4 (lower is better)
Translates to: SLQINCSISLLHSYRVHSSRTRT*TCRAAA
Trigger: CGCAGCGGCTCTGCAAGTGCAAGTCCGGGTCCTCGA...ACTGTGCACACGATAAGAATGGAGAAGTGATATTGAACAGTTTATTTGGAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678059.1
ENST00000678254.1
CDS-3UTR GCA 90 bp CTTGGGGTCACTGAGAATCTGAGGTTAAATTTCCCAGATTATAACCAAGAACAGTTCTGTGCGCTCTGCTaGTCCGGAAGCCGGATCGAG +
Preference number: 4 (lower is better)
Translates to: LGVTENLRLNFPDYNQEQFCALC*SGSRIE
Trigger: CTCGATCCGGCTTCCGGAGCAGCAGAGCGCACAGAA...CTGTTCTTGGTTATAATCTGGGAAATTTAACCTCAGATTCTCAGTGACCCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CCA 90 bp AGAACAGGGATCCCTTTTTGGCCCACTGTAGACAAGGTACACTGTGAAGTCTTCCTGGTGTTTCCATTCTaGGCTGCCATGGTGATGTCT +
Preference number: 4 (lower is better)
Translates to: RTGIPFWPTVDKVHCEVFLVFPF*AAMVMS
Trigger: AGACATCACCATGGCAGCCCAGAATGGAAACACCAG...GAAGACTTCACAGTGTACCTTGTCTACAGTGGGCCAAAAAGGGATCCCTGTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217270.4
ENST00000678254.1
CDS-3UTR CCA 90 bp CAGGAGTCTTTCATCCAAAGAACAGGGATGAAAAAGTGTGGGTATTTCTCTAATGGTCAAGGTCAGCACTaGACTTGCTCCCCCGCTGGG +
Preference number: 4 (lower is better)
Translates to: QESFIQRTGMKKCGYFSNGQGQH*TCSPAG
Trigger: CCCAGCGGGGGAGCAAGTCCAGTGCTGACCTTGACC...ATTAGAGAAATACCCACACTTTTTCATCCCTGTTCTTTGGATGAAAGACTCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CCA 90 bp TCTAGGACAAAAAGGAACAGGGTGATGAATCCTGCTGACAGACTTGACTGGTACAGGGTTTCACCATGTTaGCCAGCCTGGGTTGAACTC +
Preference number: 4 (lower is better)
Translates to: SRTKRNRVMNPADRLDWYRVSPC*PAWVEL
Trigger: GAGTTCAACCCAGGCTGGCCAACATGGTGAAACCCT...GTACCAGTCAAGTCTGTCAGCAGGATTCATCACCCTGTTCCTTTTTGTCCTAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CCA 90 bp GCATTTTCTGAGAGTACAATGATTGGGCTGAAGGTGAGTCTGCTGGGTGGTGATCACATTCACAAACCATaGCCTCAATGGGCTCTCCCA +
Preference number: 4 (lower is better)
Translates to: AFSESTMIGLKVSLLGGDHIHKP*PQWALP
Trigger: TGGGAGAGCCCATTGAGGCCATGGTTTGTGAATGTG...ATCACCACCCAGCAGACTCACCTTCAGCCCAATCATTGTACTCTCAGAAAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CCA 90 bp AGAACAGGGATCCCTTTTTGGCCCACTGTAGACAAGGTACACTGTGAAGTCTTCCACATTCACAAACCATaGCCTCAATGGGCTCTCCCA +
Preference number: 4 (lower is better)
Translates to: RTGIPFWPTVDKVHCEVFHIHKP*PQWALP
Trigger: TGGGAGAGCCCATTGAGGCCATGGTTTGTGAATGTG...GAAGACTTCACAGTGTACCTTGTCTACAGTGGGCCAAAAAGGGATCCCTGTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR TCA 90 bp TCCCTCCAAATAAACTGTTCAATATCACTTCTCCATTCTTATCGTGTGCACAGTTCTGGGCTGCCATGGTaGTGTCTGCTTGGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: SLQINCSISLLHSYRVHSSGLPW*CLLGAS
Trigger: GCTGGCTCCAAGCAGACATCACCATGGCAGCCCAGA...ACTGTGCACACGATAAGAATGGAGAAGTGATATTGAACAGTTTATTTGGAGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217270.4
CDS-3UTR TCA 90 bp ATCCTGCTGACAGACTTGACTGGTACATGGTCCATTCCTAAAGAATCTCCTGATCCGATGGGATGGCAATaGGAATGGACACCATCCAGA +
Preference number: 4 (lower is better)
Translates to: ILLTDLTGTWSIPKESPDPMGWQ*EWTPSR
Trigger: TCTGGATGGTGTCCATTCTCATTGCCATCCCATCGG...ATCAGGAGATTCTTTAGGAATGGACCATGTACCAGTCAAGTCTGTCAGCAGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR TCA 90 bp ATCCTGCTGACAGACTTGACTGGTACATGGTCCATTCCTAAAGAATCTCCTGATTGGGTCACTTCAGCCTaGTACAGTCCACCTCTTCTG +
Preference number: 4 (lower is better)
Translates to: ILLTDLTGTWSIPKESPDWVTSA*YSPPLL
Trigger: CAGAAGAGGTGGACTGTATCAGGCTGAAGTGACCCA...ATCAGGAGATTCTTTAGGAATGGACCATGTACCAGTCAAGTCTGTCAGCAGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR TCA 90 bp TCCTTAGCAAAATGCCCACAGAGATTATGTTCATTGCCAGTGGCAACCTCCACTTTGGTTGATGGTGGGTaGTGCTCTGAGTACTGGACT +
Preference number: 4 (lower is better)
Translates to: SLAKCPQRLCSLPVATSTLVDGG*CSEYWT
Trigger: AGTCCAGTACTCAGAGCATCACCCACCATCAACCAA...AGTGGAGGTTGCCACTGGCAATGAACATAATCTCTGTGGGCATTTTGCTAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR TCA 90 bp TCCTTAGCAAAATGCCCACAGAGATTATGTTCATTGCCAGTGGCAACCTCCACTTGGAGTGCAGTGGTGTaGTCTCAATTCACTGCAACC +
Preference number: 4 (lower is better)
Translates to: SLAKCPQRLCSLPVATSTWSAVV*SQFTAT
Trigger: GGTTGCAGTGAATTGAGATCACACCACTGCACTCCA...AGTGGAGGTTGCCACTGGCAATGAACATAATCTCTGTGGGCATTTTGCTAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR TCA 90 bp TCTAGGACAAAAAGGAACAGGGTGATGAATCCTGCTGACAGACTTGACTGGTACTGGAGTGCAGTGGTGTaGTCTCAATTCACTGCAACC +
Preference number: 4 (lower is better)
Translates to: SRTKRNRVMNPADRLDWYWSAVV*SQFTAT
Trigger: GGTTGCAGTGAATTGAGATCACACCACTGCACTCCA...GTACCAGTCAAGTCTGTCAGCAGGATTCATCACCCTGTTCCTTTTTGTCCTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR GCA 90 bp AGAACAGGGATCCCTTTTTGGCCCACTGTAGACAAGGTACACTGTGAAGTCTTCGAGGACCGTTTCTGTTaGAAAGTAAGCCGATGGGAT +
Preference number: 4 (lower is better)
Translates to: RTGIPFWPTVDKVHCEVFEDRFC*KVSRWD
Trigger: ATCCCATCGGCTTACTTTGCAACAGAAACGGTCCTC...GAAGACTTCACAGTGTACCTTGTCTACAGTGGGCCAAAAAGGGATCCCTGTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR GCA 90 bp GCATTTTCTGAGAGTACAATGATTGGGCTGAAGGTGAGTCTGCTGGGTGGTGATACTAGGGTGCTATTTTaGAACATGCAGGGAGGACTG +
Preference number: 4 (lower is better)
Translates to: AFSESTMIGLKVSLLGGDTRVLF*NMQGGL
Trigger: CAGTCCTCCCTGCATGTTGCAAAATAGCACCCTAGT...ATCACCACCCAGCAGACTCACCTTCAGCCCAATCATTGTACTCTCAGAAAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR GCA 90 bp GAGCCACTGAAATCCTTTGCACTGAGGAGGCAAAAATTGACACCTCAGGATTACTTCAAGCAATTCTCATaGCTCAGCCTCCTGAGGAGC +
Preference number: 4 (lower is better)
Translates to: EPLKSFALRRQKLTPQDYFKQFS*LSLLRS
Trigger: GCTCCTCAGGAGGCTGAGGCATGAGAATTGCTTGAA...GTAATCCTGAGGTGTCAATTTTTGCCTCCTCAGTGCAAAGGATTTCAGTGGCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR GCA 90 bp GTGTCTAATCTCCTTGTTGGGATTGTGGACACAGTAGGTGTCGAGCGGATATCAATTCACTGCAACCTCTaGCTCTGGGGTTCAAGCAAT +
Preference number: 4 (lower is better)
Translates to: VSNLLVGIVDTVGVERISIHCNL*LWGSSN
Trigger: ATTGCTTGAACCCCAGAGGCAGAGGTTGCAGTGAAT...TGATATCCGCTCGACACCTACTGTGTCCACAATCCCAACAAGGAGATTAGACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR GCA 90 bp CAGGAGTCTTTCATCCAAAGAACAGGGATGAAAAAGTGTGGGTATTTCTCTAATCCTTTCTGTGCGCTCTaGTGCTCCGGAAGCCGGATC +
Preference number: 4 (lower is better)
Translates to: QESFIQRTGMKKCGYFSNPFCAL*CSGSRI
Trigger: GATCCGGCTTCCGGAGCAGCAGAGCGCACAGAAAGG...ATTAGAGAAATACCCACACTTTTTCATCCCTGTTCTTTGGATGAAAGACTCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CCA 90 bp TTGCTGCTCCTTGTGTCTAATCTCCTTGTTGGGATTGTGGACACAGTAGGTGTCGGCATGGTCTTGGGGTaGATTAAAGTTGGGTGTGAA +
Preference number: 4 (lower is better)
Translates to: LLLLVSNLLVGIVDTVGVGMVLG*IKVGCE
Trigger: TTCACACCCAACTTTAATCCACCCCAAGACCATGCC...GACACCTACTGTGTCCACAATCCCAACAAGGAGATTAGACACAAGGAGCAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217270.4
ENST00000678254.1
CDS-3UTR CCA 90 bp TCCTTAGCAAAATGCCCACAGAGATTATGTTCATTGCCAGTGGCAACCTCCACTAGAAGGTCCGGGTCTTaGTCATGTCCTCATCCTCAT +
Preference number: 4 (lower is better)
Translates to: SLAKCPQRLCSLPVATSTRRSGS*SCPHPH
Trigger: ATGAGGATGAGGACATGACCAAGACCCGGACCTTCT...AGTGGAGGTTGCCACTGGCAATGAACATAATCTCTGTGGGCATTTTGCTAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CCA 90 bp GTGTCTAATCTCCTTGTTGGGATTGTGGACACAGTAGGTGTCGAGCGGATATCACGAGATATCTGTCAATaGCAATGGCCAGCAAGGCAT +
Preference number: 4 (lower is better)
Translates to: VSNLLVGIVDTVGVERISRDICQ*QWPARH
Trigger: ATGCCTTGCTGGCCATTGCCATTGACAGATATCTCG...TGATATCCGCTCGACACCTACTGTGTCCACAATCCCAACAAGGAGATTAGACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CCA 90 bp GCATTTTCTGAGAGTACAATGATTGGGCTGAAGGTGAGTCTGCTGGGTGGTGATTCAAGGGGTGAACGATaGCGAGATATCTGTCAATGG +
Preference number: 4 (lower is better)
Translates to: AFSESTMIGLKVSLLGGDSRGER*RDICQW
Trigger: CCATTGACAGATATCTCGCCATCGTTCACCCCTTGA...ATCACCACCCAGCAGACTCACCTTCAGCCCAATCATTGTACTCTCAGAAAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CCA 90 bp CTTGGGGTCACTGAGAATCTGAGGTTAAATTTCCCAGATTATAACCAAGAACAGCGAATCTGCTCCGTCTaGAACCCAGGGACTGCCTTG +
Preference number: 4 (lower is better)
Translates to: LGVTENLRLNFPDYNQEQRICSV*NPGTAL
Trigger: CAAGGCAGTCCCTGGGTTCCAGACGGAGCAGATTCG...CTGTTCTTGGTTATAATCTGGGAAATTTAACCTCAGATTCTCAGTGACCCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR TCA 90 bp TCTAGGACAAAAAGGAACAGGGTGATGAATCCTGCTGACAGACTTGACTGGTACGGGTTTTCAATTGTGTaGCACCAGTGGGTCACTTCA +
Preference number: 4 (lower is better)
Translates to: SRTKRNRVMNPADRLDWYGFSIV*HQWVTS
Trigger: TGAAGTGACCCACTGGTGTCACACAATTGAAAACCC...GTACCAGTCAAGTCTGTCAGCAGGATTCATCACCCTGTTCCTTTTTGTCCTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR TCA 90 bp ATCCTGCTGACAGACTTGACTGGTACATGGTCCATTCCTAAAGAATCTCCTGATTTGGTTGATGGTGGGTaGTGCTCTGAGTACTGGACT +
Preference number: 4 (lower is better)
Translates to: ILLTDLTGTWSIPKESPDLVDGG*CSEYWT
Trigger: AGTCCAGTACTCAGAGCATCACCCACCATCAACCAA...ATCAGGAGATTCTTTAGGAATGGACCATGTACCAGTCAAGTCTGTCAGCAGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR TCA 90 bp GTGTCTAATCTCCTTGTTGGGATTGTGGACACAGTAGGTGTCGAGCGGATATCATGGCCTATAGCCTTTTaGTATTCCTGCACTGGTAAG +
Preference number: 4 (lower is better)
Translates to: VSNLLVGIVDTVGVERISWPIAF*YSCTGK
Trigger: CTTACCAGTGCAGGAATATCAAAAGGCTATAGGCCA...TGATATCCGCTCGACACCTACTGTGTCCACAATCCCAACAAGGAGATTAGACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR TCA 90 bp GTGTCTAATCTCCTTGTTGGGATTGTGGACACAGTAGGTGTCGAGCGGATATCAAGACAAGGTACACTGTaGAGTCTTCAGGAGTCTTTC +
Preference number: 4 (lower is better)
Translates to: VSNLLVGIVDTVGVERISRQGTL*SLQESF
Trigger: GAAAGACTCCTGAAGACTTCACAGTGTACCTTGTCT...TGATATCCGCTCGACACCTACTGTGTCCACAATCCCAACAAGGAGATTAGACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR GCA 90 bp TCCTTAGCAAAATGCCCACAGAGATTATGTTCATTGCCAGTGGCAACCTCCACTCATGATGCCTGCCAGTaGAATGCCAATGACGATCTT +
Preference number: 4 (lower is better)
Translates to: SLAKCPQRLCSLPVATSTHDACQ*NANDDL
Trigger: AAGATCGTCATTGGCATTGCACTGGCAGGCATCATG...AGTGGAGGTTGCCACTGGCAATGAACATAATCTCTGTGGGCATTTTGCTAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR GCA 90 bp GAGCCACTGAAATCCTTTGCACTGAGGAGGCAAAAATTGACACCTCAGGATTACGAGGACCGTTTCTGTTaGAAAGTAAGCCGATGGGAT +
Preference number: 4 (lower is better)
Translates to: EPLKSFALRRQKLTPQDYEDRFC*KVSRWD
Trigger: ATCCCATCGGCTTACTTTGCAACAGAAACGGTCCTC...GTAATCCTGAGGTGTCAATTTTTGCCTCCTCAGTGCAAAGGATTTCAGTGGCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR GCA 90 bp CTTGGGGTCACTGAGAATCTGAGGTTAAATTTCCCAGATTATAACCAAGAACAGTGGGAGGGACGCCAGTaGAGCAGCATCATCTTCTTG +
Preference number: 4 (lower is better)
Translates to: LGVTENLRLNFPDYNQEQWEGRQ*SSIIFL
Trigger: CAAGAAGATGATGCTGCTGCACTGGCGTCCCTCCCA...CTGTTCTTGGTTATAATCTGGGAAATTTAACCTCAGATTCTCAGTGACCCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR GCA 90 bp GCATTTTCTGAGAGTACAATGATTGGGCTGAAGGTGAGTCTGCTGGGTGGTGATTCAGTCCATGTCAGTTaGTGCTCCTTGTGTCTAATC +
Preference number: 4 (lower is better)
Translates to: AFSESTMIGLKVSLLGGDSVHVS*CSLCLI
Trigger: GATTAGACACAAGGAGCAGCAACTGACATGGACTGA...ATCACCACCCAGCAGACTCACCTTCAGCCCAATCATTGTACTCTCAGAAAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR GCA 90 bp ATCCTGCTGACAGACTTGACTGGTACATGGTCCATTCCTAAAGAATCTCCTGATAGGCATGAGCCATCATaGCTGGCCTATAGCCTTTTG +
Preference number: 4 (lower is better)
Translates to: ILLTDLTGTWSIPKESPDRHEPS*LAYSLL
Trigger: CAAAAGGCTATAGGCCAGGCATGATGGCTCATGCCT...ATCAGGAGATTCTTTAGGAATGGACCATGTACCAGTCAAGTCTGTCAGCAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CCA 90 bp TCTAGGACAAAAAGGAACAGGGTGATGAATCCTGCTGACAGACTTGACTGGTACGGCATGGTCTTGGGGTaGATTAAAGTTGGGTGTGAA +
Preference number: 4 (lower is better)
Translates to: SRTKRNRVMNPADRLDWYGMVLG*IKVGCE
Trigger: TTCACACCCAACTTTAATCCACCCCAAGACCATGCC...GTACCAGTCAAGTCTGTCAGCAGGATTCATCACCCTGTTCCTTTTTGTCCTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217270.4
ENST00000678254.1
CDS-3UTR CCA 90 bp TGTCAGCTGATTTGGTTCATGTCTAGTCTCATTGTATGTTACGACTTTGCAGCATGGCCAGCAAGGCATTaGTGGAGACGTAGAGGGAGA +
Preference number: 4 (lower is better)
Translates to: CQLIWFMSSLIVCYDFAAWPARH*WRRRGR
Trigger: TCTCCCTCTACGTCTCCACCAATGCCTTGCTGGCCA...TGCTGCAAAGTCGTAACATACAATGAGACTAGACATGAACCAAATCAGCTGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CCA 90 bp CTTGGGGTCACTGAGAATCTGAGGTTAAATTTCCCAGATTATAACCAAGAACAGTGGCCAGCAAGGCATTaGTGGAGACGTAGAGGGAGA +
Preference number: 4 (lower is better)
Translates to: LGVTENLRLNFPDYNQEQWPARH*WRRRGR
Trigger: TCTCCCTCTACGTCTCCACCAATGCCTTGCTGGCCA...CTGTTCTTGGTTATAATCTGGGAAATTTAACCTCAGATTCTCAGTGACCCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CCA 90 bp TTGCTGCTCCTTGTGTCTAATCTCCTTGTTGGGATTGTGGACACAGTAGGTGTCTTGGTCAAATATGGTTaGGTCAGTCCCAAACCAGGT +
Preference number: 4 (lower is better)
Translates to: LLLLVSNLLVGIVDTVGVLVKYG*VSPKPG
Trigger: ACCTGGTTTGGGACTGACCCAACCATATTTGACCAA...GACACCTACTGTGTCCACAATCCCAACAAGGAGATTAGACACAAGGAGCAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR TCA 90 bp CATGATGCTGTAAACCACGCACTGACAAACTTATCGTTACATTTCCATTGTGTCCCGATGGGATGGCAATaGGAATGGACACCATCCAGA +
Preference number: 4 (lower is better)
Translates to: HDAVNHALTNLSLHFHCVPMGWQ*EWTPSR
Trigger: TCTGGATGGTGTCCATTCTCATTGCCATCCCATCGG...GACACAATGGAAATGTAACGATAAGTTTGTCAGTGCGTGGTTTACAGCATCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR TCA 90 bp ATCCTGCTGACAGACTTGACTGGTACATGGTCCATTCCTAAAGAATCTCCTGATGGGTTTTCAATTGTGTaGCACCAGTGGGTCACTTCA +
Preference number: 4 (lower is better)
Translates to: ILLTDLTGTWSIPKESPDGFSIV*HQWVTS
Trigger: TGAAGTGACCCACTGGTGTCACACAATTGAAAACCC...ATCAGGAGATTCTTTAGGAATGGACCATGTACCAGTCAAGTCTGTCAGCAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR TCA 90 bp GTGTCTAATCTCCTTGTTGGGATTGTGGACACAGTAGGTGTCGAGCGGATATCAAGGGAAGATGGAGGGTaGACTATCTATATATCTGGA +
Preference number: 4 (lower is better)
Translates to: VSNLLVGIVDTVGVERISREDGG*TIYISG
Trigger: TCCAGATATATAGATAGTTCACCCTCCATCTTCCCT...TGATATCCGCTCGACACCTACTGTGTCCACAATCCCAACAAGGAGATTAGACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR TCA 90 bp TTGCTGCTCCTTGTGTCTAATCTCCTTGTTGGGATTGTGGACACAGTAGGTGTCAGGGAAGATGGAGGGTaGACTATCTATATATCTGGA +
Preference number: 4 (lower is better)
Translates to: LLLLVSNLLVGIVDTVGVREDGG*TIYISG
Trigger: TCCAGATATATAGATAGTTCACCCTCCATCTTCCCT...GACACCTACTGTGTCCACAATCCCAACAAGGAGATTAGACACAAGGAGCAGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR TCA 90 bp TCTAGGACAAAAAGGAACAGGGTGATGAATCCTGCTGACAGACTTGACTGGTACTGGCCTATAGCCTTTTaGTATTCCTGCACTGGTAAG +
Preference number: 4 (lower is better)
Translates to: SRTKRNRVMNPADRLDWYWPIAF*YSCTGK
Trigger: CTTACCAGTGCAGGAATATCAAAAGGCTATAGGCCA...GTACCAGTCAAGTCTGTCAGCAGGATTCATCACCCTGTTCCTTTTTGTCCTAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR TCA 90 bp AGAACAGGGATCCCTTTTTGGCCCACTGTAGACAAGGTACACTGTGAAGTCTTCTATCGTGTGCACAGTTaGAAAGCACATTCACAAACC +
Preference number: 4 (lower is better)
Translates to: RTGIPFWPTVDKVHCEVFYRVHS*KAHSQT
Trigger: GGTTTGTGAATGTGCTTTTCAACTGTGCACACGATA...GAAGACTTCACAGTGTACCTTGTCTACAGTGGGCCAAAAAGGGATCCCTGTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR TCA 90 bp TTGCTGCTCCTTGTGTCTAATCTCCTTGTTGGGATTGTGGACACAGTAGGTGTCGAGTCTTGGGGTCACTaGGAATCTGAGGTTAAATTT +
Preference number: 4 (lower is better)
Translates to: LLLLVSNLLVGIVDTVGVESWGH*ESEVKF
Trigger: AAATTTAACCTCAGATTCTCAGTGACCCCAAGACTC...GACACCTACTGTGTCCACAATCCCAACAAGGAGATTAGACACAAGGAGCAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR TCA 90 bp AGAACAGGGATCCCTTTTTGGCCCACTGTAGACAAGGTACACTGTGAAGTCTTCGAGTCTTGGGGTCACTaGGAATCTGAGGTTAAATTT +
Preference number: 4 (lower is better)
Translates to: RTGIPFWPTVDKVHCEVFESWGH*ESEVKF
Trigger: AAATTTAACCTCAGATTCTCAGTGACCCCAAGACTC...GAAGACTTCACAGTGTACCTTGTCTACAGTGGGCCAAAAAGGGATCCCTGTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR GCA 90 bp TCTAGGACAAAAAGGAACAGGGTGATGAATCCTGCTGACAGACTTGACTGGTACGTAAATGTCAGCTCCTaGTGTCCCTGTCTAATCTCA +
Preference number: 4 (lower is better)
Translates to: SRTKRNRVMNPADRLDWYVNVSS*CPCLIS
Trigger: TGAGATTAGACAGGGACAGCAGGAGCTGACATTTAC...GTACCAGTCAAGTCTGTCAGCAGGATTCATCACCCTGTTCCTTTTTGTCCTAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR GCA 90 bp GCATTTTCTGAGAGTACAATGATTGGGCTGAAGGTGAGTCTGCTGGGTGGTGATGCCACTGAAATCCTTTaGACTGAGGAGGCAAAAATT +
Preference number: 4 (lower is better)
Translates to: AFSESTMIGLKVSLLGGDATEIL*TEEAKI
Trigger: AATTTTTGCCTCCTCAGTGCAAAGGATTTCAGTGGC...ATCACCACCCAGCAGACTCACCTTCAGCCCAATCATTGTACTCTCAGAAAATGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR GCA 90 bp GTGTCTAATCTCCTTGTTGGGATTGTGGACACAGTAGGTGTCGAGCGGATATCAAGAGATTATGTTCATTaGCAGTGGCAACCTCCACTT +
Preference number: 4 (lower is better)
Translates to: VSNLLVGIVDTVGVERISRDYVH*QWQPPL
Trigger: AAGTGGAGGTTGCCACTGGCAATGAACATAATCTCT...TGATATCCGCTCGACACCTACTGTGTCCACAATCCCAACAAGGAGATTAGACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR GCA 90 bp GCATTTTCTGAGAGTACAATGATTGGGCTGAAGGTGAGTCTGCTGGGTGGTGATAGAGATTATGTTCATTaGCAGTGGCAACCTCCACTT +
Preference number: 4 (lower is better)
Translates to: AFSESTMIGLKVSLLGGDRDYVH*QWQPPL
Trigger: AAGTGGAGGTTGCCACTGGCAATGAACATAATCTCT...ATCACCACCCAGCAGACTCACCTTCAGCCCAATCATTGTACTCTCAGAAAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR GCA 90 bp TCTAGGACAAAAAGGAACAGGGTGATGAATCCTGCTGACAGACTTGACTGGTACTGCTATTTTGCAACATaGAGGGAGGACTGTCAACAC +
Preference number: 4 (lower is better)
Translates to: SRTKRNRVMNPADRLDWYCYFAT*REDCQH
Trigger: GTGTTGACAGTCCTCCCTGCATGTTGCAAAATAGCA...GTACCAGTCAAGTCTGTCAGCAGGATTCATCACCCTGTTCCTTTTTGTCCTAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR GCA 90 bp GAGCCACTGAAATCCTTTGCACTGAGGAGGCAAAAATTGACACCTCAGGATTACTGCTATTTTGCAACATaGAGGGAGGACTGTCAACAC +
Preference number: 4 (lower is better)
Translates to: EPLKSFALRRQKLTPQDYCYFAT*REDCQH
Trigger: GTGTTGACAGTCCTCCCTGCATGTTGCAAAATAGCA...GTAATCCTGAGGTGTCAATTTTTGCCTCCTCAGTGCAAAGGATTTCAGTGGCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CCA 90 bp CTTGGGGTCACTGAGAATCTGAGGTTAAATTTCCCAGATTATAACCAAGAACAGGAGAGGGAGGAGGCATaGTCTTGGGGTGGATTAAAG +
Preference number: 4 (lower is better)
Translates to: LGVTENLRLNFPDYNQEQEREEA*SWGGLK
Trigger: CTTTAATCCACCCCAAGACCATGCCTCCTCCCTCTC...CTGTTCTTGGTTATAATCTGGGAAATTTAACCTCAGATTCTCAGTGACCCCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217270.4
ENST00000678254.1
CDS-3UTR CCA 90 bp ATCCTGCTGACAGACTTGACTGGTACATGGTCCATTCCTAAAGAATCTCCTGATTCAAGGGGTGAACGATaGCGAGATATCTGTCAATGG +
Preference number: 4 (lower is better)
Translates to: ILLTDLTGTWSIPKESPDSRGER*RDICQW
Trigger: CCATTGACAGATATCTCGCCATCGTTCACCCCTTGA...ATCAGGAGATTCTTTAGGAATGGACCATGTACCAGTCAAGTCTGTCAGCAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR TCA 90 bp CAGGAGTCTTTCATCCAAAGAACAGGGATGAAAAAGTGTGGGTATTTCTCTAATCCGATGGGATGGCAATaGGAATGGACACCATCCAGA +
Preference number: 4 (lower is better)
Translates to: QESFIQRTGMKKCGYFSNPMGWQ*EWTPSR
Trigger: TCTGGATGGTGTCCATTCTCATTGCCATCCCATCGG...ATTAGAGAAATACCCACACTTTTTCATCCCTGTTCTTTGGATGAAAGACTCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR TCA 90 bp TCCCTCCAAATAAACTGTTCAATATCACTTCTCCATTCTTATCGTGTGCACAGTTGGGTCACTTCAGCCTaGTACAGTCCACCTCTTCTG +
Preference number: 4 (lower is better)
Translates to: SLQINCSISLLHSYRVHSWVTSA*YSPPLL
Trigger: CAGAAGAGGTGGACTGTATCAGGCTGAAGTGACCCA...ACTGTGCACACGATAAGAATGGAGAAGTGATATTGAACAGTTTATTTGGAGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR TCA 90 bp CATGATGCTGTAAACCACGCACTGACAAACTTATCGTTACATTTCCATTGTGTCTTCCCATGCAGCCTATaGACTTGGTTGATGGTGGGT +
Preference number: 4 (lower is better)
Translates to: HDAVNHALTNLSLHFHCVFPCSL*TWLMVG
Trigger: ACCCACCATCAACCAAGTTCATAGGCTGCATGGGAA...GACACAATGGAAATGTAACGATAAGTTTGTCAGTGCGTGGTTTACAGCATCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR TCA 90 bp TCCTTAGCAAAATGCCCACAGAGATTATGTTCATTGCCAGTGGCAACCTCCACTAGGGAAGATGGAGGGTaGACTATCTATATATCTGGA +
Preference number: 4 (lower is better)
Translates to: SLAKCPQRLCSLPVATSTREDGG*TIYISG
Trigger: TCCAGATATATAGATAGTTCACCCTCCATCTTCCCT...AGTGGAGGTTGCCACTGGCAATGAACATAATCTCTGTGGGCATTTTGCTAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR TCA 90 bp ATCCTGCTGACAGACTTGACTGGTACATGGTCCATTCCTAAAGAATCTCCTGATTGGCCTATAGCCTTTTaGTATTCCTGCACTGGTAAG +
Preference number: 4 (lower is better)
Translates to: ILLTDLTGTWSIPKESPDWPIAF*YSCTGK
Trigger: CTTACCAGTGCAGGAATATCAAAAGGCTATAGGCCA...ATCAGGAGATTCTTTAGGAATGGACCATGTACCAGTCAAGTCTGTCAGCAGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR TCA 90 bp CATGATGCTGTAAACCACGCACTGACAAACTTATCGTTACATTTCCATTGTGTCGTAACACACCTCCCATaGTGCTGTAAACCACGCACT +
Preference number: 4 (lower is better)
Translates to: HDAVNHALTNLSLHFHCVVTHLP*CCKPRT
Trigger: AGTGCGTGGTTTACAGCATCATGGGAGGTGTGTTAC...GACACAATGGAAATGTAACGATAAGTTTGTCAGTGCGTGGTTTACAGCATCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR TCA 90 bp CTTGGGGTCACTGAGAATCTGAGGTTAAATTTCCCAGATTATAACCAAGAACAGGTAACACACCTCCCATaGTGCTGTAAACCACGCACT +
Preference number: 4 (lower is better)
Translates to: LGVTENLRLNFPDYNQEQVTHLP*CCKPRT
Trigger: AGTGCGTGGTTTACAGCATCATGGGAGGTGTGTTAC...CTGTTCTTGGTTATAATCTGGGAAATTTAACCTCAGATTCTCAGTGACCCCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR TCA 90 bp AGAACAGGGATCCCTTTTTGGCCCACTGTAGACAAGGTACACTGTGAAGTCTTCCATGAATTTAGGACTTaGGTCTTAGAGTTAGGACCT +
Preference number: 4 (lower is better)
Translates to: RTGIPFWPTVDKVHCEVFHEFRT*VLELGP
Trigger: AGGTCCTAACTCTAAGACTCAAGTCCTAAATTCATG...GAAGACTTCACAGTGTACCTTGTCTACAGTGGGCCAAAAAGGGATCCCTGTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR TCA 90 bp GTGTCTAATCTCCTTGTTGGGATTGTGGACACAGTAGGTGTCGAGCGGATATCATCCAAAGAACAGGGATaGAAAAGTGTGGGTATTTCT +
Preference number: 4 (lower is better)
Translates to: VSNLLVGIVDTVGVERISSKEQG*KSVGIS
Trigger: AGAAATACCCACACTTTTTCATCCCTGTTCTTTGGA...TGATATCCGCTCGACACCTACTGTGTCCACAATCCCAACAAGGAGATTAGACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR TCA 90 bp TTGCTGCTCCTTGTGTCTAATCTCCTTGTTGGGATTGTGGACACAGTAGGTGTCTCCAAAGAACAGGGATaGAAAAGTGTGGGTATTTCT +
Preference number: 4 (lower is better)
Translates to: LLLLVSNLLVGIVDTVGVSKEQG*KSVGIS
Trigger: AGAAATACCCACACTTTTTCATCCCTGTTCTTTGGA...GACACCTACTGTGTCCACAATCCCAACAAGGAGATTAGACACAAGGAGCAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR TCA 90 bp AGAACAGGGATCCCTTTTTGGCCCACTGTAGACAAGGTACACTGTGAAGTCTTCTCCAAAGAACAGGGATaGAAAAGTGTGGGTATTTCT +
Preference number: 4 (lower is better)
Translates to: RTGIPFWPTVDKVHCEVFSKEQG*KSVGIS
Trigger: AGAAATACCCACACTTTTTCATCCCTGTTCTTTGGA...GAAGACTTCACAGTGTACCTTGTCTACAGTGGGCCAAAAAGGGATCCCTGTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR TCA 90 bp ATCCTGCTGACAGACTTGACTGGTACATGGTCCATTCCTAAAGAATCTCCTGATAGACAAGGTACACTGTaGAGTCTTCAGGAGTCTTTC +
Preference number: 4 (lower is better)
Translates to: ILLTDLTGTWSIPKESPDRQGTL*SLQESF
Trigger: GAAAGACTCCTGAAGACTTCACAGTGTACCTTGTCT...ATCAGGAGATTCTTTAGGAATGGACCATGTACCAGTCAAGTCTGTCAGCAGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR TCA 90 bp TCCTTAGCAAAATGCCCACAGAGATTATGTTCATTGCCAGTGGCAACCTCCACTGAGTCTTGGGGTCACTaGGAATCTGAGGTTAAATTT +
Preference number: 4 (lower is better)
Translates to: SLAKCPQRLCSLPVATSTESWGH*ESEVKF
Trigger: AAATTTAACCTCAGATTCTCAGTGACCCCAAGACTC...AGTGGAGGTTGCCACTGGCAATGAACATAATCTCTGTGGGCATTTTGCTAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR TCA 90 bp TGTCAGCTGATTTGGTTCATGTCTAGTCTCATTGTATGTTACGACTTTGCAGCATGGAGTGCAGTGGTGTaGTCTCAATTCACTGCAACC +
Preference number: 4 (lower is better)
Translates to: CQLIWFMSSLIVCYDFAAWSAVV*SQFTAT
Trigger: GGTTGCAGTGAATTGAGATCACACCACTGCACTCCA...TGCTGCAAAGTCGTAACATACAATGAGACTAGACATGAACCAAATCAGCTGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR GCA 90 bp CTTGGGGTCACTGAGAATCTGAGGTTAAATTTCCCAGATTATAACCAAGAACAGAATGACGATCTTGGCTaGGAAGAAGGTCCGGGTCTT +
Preference number: 4 (lower is better)
Translates to: LGVTENLRLNFPDYNQEQNDDLG*EEGPGL
Trigger: AAGACCCGGACCTTCTTCGCAGCCAAGATCGTCATT...CTGTTCTTGGTTATAATCTGGGAAATTTAACCTCAGATTCTCAGTGACCCCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR GCA 90 bp CATGATGCTGTAAACCACGCACTGACAAACTTATCGTTACATTTCCATTGTGTCAATGACGATCTTGGCTaGGAAGAAGGTCCGGGTCTT +
Preference number: 4 (lower is better)
Translates to: HDAVNHALTNLSLHFHCVNDDLG*EEGPGL
Trigger: AAGACCCGGACCTTCTTCGCAGCCAAGATCGTCATT...GACACAATGGAAATGTAACGATAAGTTTGTCAGTGCGTGGTTTACAGCATCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR GCA 90 bp TTGCTGCTCCTTGTGTCTAATCTCCTTGTTGGGATTGTGGACACAGTAGGTGTCCAGTCCTTAGCAAAATaGCCACAGAGATTATGTTCA +
Preference number: 4 (lower is better)
Translates to: LLLLVSNLLVGIVDTVGVQSLAK*PQRLCS
Trigger: TGAACATAATCTCTGTGGGCATTTTGCTAAGGACTG...GACACCTACTGTGTCCACAATCCCAACAAGGAGATTAGACACAAGGAGCAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR GCA 90 bp ATCCTGCTGACAGACTTGACTGGTACATGGTCCATTCCTAAAGAATCTCCTGATTATGCAGCACTAGGGTaGTATTTTGCAACATGCAGG +
Preference number: 4 (lower is better)
Translates to: ILLTDLTGTWSIPKESPDYAALG*YFATCR
Trigger: CCTGCATGTTGCAAAATAGCACCCTAGTGCTGCATA...ATCAGGAGATTCTTTAGGAATGGACCATGTACCAGTCAAGTCTGTCAGCAGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR GCA 90 bp CTTGGGGTCACTGAGAATCTGAGGTTAAATTTCCCAGATTATAACCAAGAACAGTTCAAGCAATTCTCATaGCTCAGCCTCCTGAGGAGC +
Preference number: 4 (lower is better)
Translates to: LGVTENLRLNFPDYNQEQFKQFS*LSLLRS
Trigger: GCTCCTCAGGAGGCTGAGGCATGAGAATTGCTTGAA...CTGTTCTTGGTTATAATCTGGGAAATTTAACCTCAGATTCTCAGTGACCCCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR GCA 90 bp CTTGGGGTCACTGAGAATCTGAGGTTAAATTTCCCAGATTATAACCAAGAACAGGTTTCCATTCTGGGCTaGCATGGTGATGTCTGTCTC +
Preference number: 4 (lower is better)
Translates to: LGVTENLRLNFPDYNQEQVSILG*HGDVCL
Trigger: GAGACAGACATCACCATGGCAGCCCAGAATGGAAAC...CTGTTCTTGGTTATAATCTGGGAAATTTAACCTCAGATTCTCAGTGACCCCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678254.1
CDS-3UTR CCA 90 bp TGTCAGCTGATTTGGTTCATGTCTAGTCTCATTGTATGTTACGACTTTGCAGCAGAGGAGGCATGGTCTTaGGGTGGATTAAAGTTGGGT +
Preference number: 4 (lower is better)
Translates to: CQLIWFMSSLIVCYDFAAEEAWS*GGLKLG
Trigger: ACCCAACTTTAATCCACCCCAAGACCATGCCTCCTC...TGCTGCAAAGTCGTAACATACAATGAGACTAGACATGAACCAAATCAGCTGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217270.4
ENST00000678254.1
CDS-3UTR CCA 90 bp CTTGGGGTCACTGAGAATCTGAGGTTAAATTTCCCAGATTATAACCAAGAACAGGAGGAGGCATGGTCTTaGGGTGGATTAAAGTTGGGT +
Preference number: 4 (lower is better)
Translates to: LGVTENLRLNFPDYNQEQEEAWS*GGLKLG
Trigger: ACCCAACTTTAATCCACCCCAAGACCATGCCTCCTC...CTGTTCTTGGTTATAATCTGGGAAATTTAACCTCAGATTCTCAGTGACCCCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217270.4
ENST00000678254.1
CDS-3UTR CCA 90 bp CTTGGGGTCACTGAGAATCTGAGGTTAAATTTCCCAGATTATAACCAAGAACAGAGAAGGTCCGGGTCTTaGTCATGTCCTCATCCTCAT +
Preference number: 4 (lower is better)
Translates to: LGVTENLRLNFPDYNQEQRRSGS*SCPHPH
Trigger: ATGAGGATGAGGACATGACCAAGACCCGGACCTTCT...CTGTTCTTGGTTATAATCTGGGAAATTTAACCTCAGATTCTCAGTGACCCCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CCA 90 bp GTGTCTAATCTCCTTGTTGGGATTGTGGACACAGTAGGTGTCGAGCGGATATCACTAATCTCATTGGTGTaGTTTGCACACAGTACATGT +
Preference number: 4 (lower is better)
Translates to: VSNLLVGIVDTVGVERISLISLV*FAHSTC
Trigger: ACATGTACTGTGTGCAAACCACACCAATGAGATTAG...TGATATCCGCTCGACACCTACTGTGTCCACAATCCCAACAAGGAGATTAGACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CCA 90 bp CAGGAGTCTTTCATCCAAAGAACAGGGATGAAAAAGTGTGGGTATTTCTCTAATGGAGGCAGTAGGAGGTaGGTGGGAAAGTTCAGTATG +
Preference number: 4 (lower is better)
Translates to: QESFIQRTGMKKCGYFSNGGSRR*VGKFSM
Trigger: CATACTGAACTTTCCCACCCACCTCCTACTGCCTCC...ATTAGAGAAATACCCACACTTTTTCATCCCTGTTCTTTGGATGAAAGACTCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CCA 90 bp CTTGGGGTCACTGAGAATCTGAGGTTAAATTTCCCAGATTATAACCAAGAACAGCACATTCACAAACCATaGCCTCAATGGGCTCTCCCA +
Preference number: 4 (lower is better)
Translates to: LGVTENLRLNFPDYNQEQHIHKP*PQWALP
Trigger: TGGGAGAGCCCATTGAGGCCATGGTTTGTGAATGTG...CTGTTCTTGGTTATAATCTGGGAAATTTAACCTCAGATTCTCAGTGACCCCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CCA 90 bp ATCCTGCTGACAGACTTGACTGGTACATGGTCCATTCCTAAAGAATCTCCTGATTTGGTCAAATATGGTTaGGTCAGTCCCAAACCAGGT +
Preference number: 4 (lower is better)
Translates to: ILLTDLTGTWSIPKESPDLVKYG*VSPKPG
Trigger: ACCTGGTTTGGGACTGACCCAACCATATTTGACCAA...ATCAGGAGATTCTTTAGGAATGGACCATGTACCAGTCAAGTCTGTCAGCAGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CCA 90 bp GCATTTTCTGAGAGTACAATGATTGGGCTGAAGGTGAGTCTGCTGGGTGGTGATGACTTGACTGGTACATaGTCCATTCCTAAAGAATCT +
Preference number: 4 (lower is better)
Translates to: AFSESTMIGLKVSLLGGDDLTGT*SIPKES
Trigger: AGATTCTTTAGGAATGGACCATGTACCAGTCAAGTC...ATCACCACCCAGCAGACTCACCTTCAGCCCAATCATTGTACTCTCAGAAAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR TCA 90 bp CAGGAGTCTTTCATCCAAAGAACAGGGATGAAAAAGTGTGGGTATTTCTCTAATGTAACACACCTCCCATaGTGCTGTAAACCACGCACT +
Preference number: 4 (lower is better)
Translates to: QESFIQRTGMKKCGYFSNVTHLP*CCKPRT
Trigger: AGTGCGTGGTTTACAGCATCATGGGAGGTGTGTTAC...ATTAGAGAAATACCCACACTTTTTCATCCCTGTTCTTTGGATGAAAGACTCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR TCA 90 bp TCTAGGACAAAAAGGAACAGGGTGATGAATCCTGCTGACAGACTTGACTGGTACCATGAATTTAGGACTTaGGTCTTAGAGTTAGGACCT +
Preference number: 4 (lower is better)
Translates to: SRTKRNRVMNPADRLDWYHEFRT*VLELGP
Trigger: AGGTCCTAACTCTAAGACTCAAGTCCTAAATTCATG...GTACCAGTCAAGTCTGTCAGCAGGATTCATCACCCTGTTCCTTTTTGTCCTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR TCA 90 bp AGAACAGGGATCCCTTTTTGGCCCACTGTAGACAAGGTACACTGTGAAGTCTTCAAACAGATTCAGAAGTaGTATTTATGCAGCACTAGG +
Preference number: 4 (lower is better)
Translates to: RTGIPFWPTVDKVHCEVFKQIQK*YLCSTR
Trigger: CCTAGTGCTGCATAAATATCACTTCTGAATCTGTTT...GAAGACTTCACAGTGTACCTTGTCTACAGTGGGCCAAAAAGGGATCCCTGTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR TCA 90 bp GTGTCTAATCTCCTTGTTGGGATTGTGGACACAGTAGGTGTCGAGCGGATATCAAAACAGATTCAGAAGTaGTATTTATGCAGCACTAGG +
Preference number: 4 (lower is better)
Translates to: VSNLLVGIVDTVGVERISKQIQK*YLCSTR
Trigger: CCTAGTGCTGCATAAATATCACTTCTGAATCTGTTT...TGATATCCGCTCGACACCTACTGTGTCCACAATCCCAACAAGGAGATTAGACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR TCA 90 bp GCATTTTCTGAGAGTACAATGATTGGGCTGAAGGTGAGTCTGCTGGGTGGTGATAAACAGATTCAGAAGTaGTATTTATGCAGCACTAGG +
Preference number: 4 (lower is better)
Translates to: AFSESTMIGLKVSLLGGDKQIQK*YLCSTR
Trigger: CCTAGTGCTGCATAAATATCACTTCTGAATCTGTTT...ATCACCACCCAGCAGACTCACCTTCAGCCCAATCATTGTACTCTCAGAAAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR GCA 90 bp CAGGAGTCTTTCATCCAAAGAACAGGGATGAAAAAGTGTGGGTATTTCTCTAATGTTTCCATTCTGGGCTaGCATGGTGATGTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: QESFIQRTGMKKCGYFSNVSILG*HGDVCL
Trigger: CAAGCAGACATCACCATGGCAGCCCAGAATGGAAAC...ATTAGAGAAATACCCACACTTTTTCATCCCTGTTCTTTGGATGAAAGACTCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000217270.4
CDS-3UTR GCA 90 bp CATGATGCTGTAAACCACGCACTGACAAACTTATCGTTACATTTCCATTGTGTCGAGGACCGTTTCTGTTaGAAAGTAAGCCGATGGGAT +
Preference number: 4 (lower is better)
Translates to: HDAVNHALTNLSLHFHCVEDRFC*KVSRWD
Trigger: ATCCCATCGGCTTACTTTGCAACAGAAACGGTCCTC...GACACAATGGAAATGTAACGATAAGTTTGTCAGTGCGTGGTTTACAGCATCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR GCA 90 bp CAGGAGTCTTTCATCCAAAGAACAGGGATGAAAAAGTGTGGGTATTTCTCTAATAGGCATGAGCCATCATaGCTGGCCTATAGCCTTTTG +
Preference number: 4 (lower is better)
Translates to: QESFIQRTGMKKCGYFSNRHEPS*LAYSLL
Trigger: CAAAAGGCTATAGGCCAGGCATGATGGCTCATGCCT...ATTAGAGAAATACCCACACTTTTTCATCCCTGTTCTTTGGATGAAAGACTCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR GCA 90 bp TCCCTCCAAATAAACTGTTCAATATCACTTCTCCATTCTTATCGTGTGCACAGTGCAATCTCAGCTCACTaGAAACTCCAACTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: SLQINCSISLLHSYRVHSAISAH*KLQLPG
Trigger: ACCTGGGAGTTGGAGTTTGCAGTGAGCTGAGATTGC...ACTGTGCACACGATAAGAATGGAGAAGTGATATTGAACAGTTTATTTGGAGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR GCA 90 bp ATCCTGCTGACAGACTTGACTGGTACATGGTCCATTCCTAAAGAATCTCCTGATGCCACTGAAATCCTTTaGACTGAGGAGGCAAAAATT +
Preference number: 4 (lower is better)
Translates to: ILLTDLTGTWSIPKESPDATEIL*TEEAKI
Trigger: AATTTTTGCCTCCTCAGTGCAAAGGATTTCAGTGGC...ATCAGGAGATTCTTTAGGAATGGACCATGTACCAGTCAAGTCTGTCAGCAGGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR GCA 90 bp TCTAGGACAAAAAGGAACAGGGTGATGAATCCTGCTGACAGACTTGACTGGTACCAGTCCTTAGCAAAATaGCCACAGAGATTATGTTCA +
Preference number: 4 (lower is better)
Translates to: SRTKRNRVMNPADRLDWYQSLAK*PQRLCS
Trigger: TGAACATAATCTCTGTGGGCATTTTGCTAAGGACTG...GTACCAGTCAAGTCTGTCAGCAGGATTCATCACCCTGTTCCTTTTTGTCCTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CCA 90 bp TGTCAGCTGATTTGGTTCATGTCTAGTCTCATTGTATGTTACGACTTTGCAGCACGAGATATCTGTCAATaGCAATGGCCAGCAAGGCAT +
Preference number: 4 (lower is better)
Translates to: CQLIWFMSSLIVCYDFAARDICQ*QWPARH
Trigger: ATGCCTTGCTGGCCATTGCCATTGACAGATATCTCG...TGCTGCAAAGTCGTAACATACAATGAGACTAGACATGAACCAAATCAGCTGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CCA 90 bp CTTGGGGTCACTGAGAATCTGAGGTTAAATTTCCCAGATTATAACCAAGAACAGCGAGATATCTGTCAATaGCAATGGCCAGCAAGGCAT +
Preference number: 4 (lower is better)
Translates to: LGVTENLRLNFPDYNQEQRDICQ*QWPARH
Trigger: ATGCCTTGCTGGCCATTGCCATTGACAGATATCTCG...CTGTTCTTGGTTATAATCTGGGAAATTTAACCTCAGATTCTCAGTGACCCCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CCA 90 bp GAGCCACTGAAATCCTTTGCACTGAGGAGGCAAAAATTGACACCTCAGGATTACCTAATCTCATTGGTGTaGTTTGCACACAGTACATGT +
Preference number: 4 (lower is better)
Translates to: EPLKSFALRRQKLTPQDYLISLV*FAHSTC
Trigger: ACATGTACTGTGTGCAAACCACACCAATGAGATTAG...GTAATCCTGAGGTGTCAATTTTTGCCTCCTCAGTGCAAAGGATTTCAGTGGCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CCA 90 bp TTGCTGCTCCTTGTGTCTAATCTCCTTGTTGGGATTGTGGACACAGTAGGTGTCATAAATCACAGTGGATaGGGTTTCCAAATAAACTCC +
Preference number: 4 (lower is better)
Translates to: LLLLVSNLLVGIVDTVGVINHSG*GFQINS
Trigger: GGAGTTTATTTGGAAACCCCATCCACTGTGATTTAT...GACACCTACTGTGTCCACAATCCCAACAAGGAGATTAGACACAAGGAGCAGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CCA 90 bp CATGATGCTGTAAACCACGCACTGACAAACTTATCGTTACATTTCCATTGTGTCACAGGGATCCCTTTTTaGCCCACTGTAGACAAGGTA +
Preference number: 4 (lower is better)
Translates to: HDAVNHALTNLSLHFHCVTGIPF*PTVDKV
Trigger: TACCTTGTCTACAGTGGGCCAAAAAGGGATCCCTGT...GACACAATGGAAATGTAACGATAAGTTTGTCAGTGCGTGGTTTACAGCATCATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR TCA 90 bp TCCCTCCAAATAAACTGTTCAATATCACTTCTCCATTCTTATCGTGTGCACAGTGGGTTTTCAATTGTGTaGCACCAGTGGGTCACTTCA +
Preference number: 4 (lower is better)
Translates to: SLQINCSISLLHSYRVHSGFSIV*HQWVTS
Trigger: TGAAGTGACCCACTGGTGTCACACAATTGAAAACCC...ACTGTGCACACGATAAGAATGGAGAAGTGATATTGAACAGTTTATTTGGAGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR TCA 90 bp ATCCTGCTGACAGACTTGACTGGTACATGGTCCATTCCTAAAGAATCTCCTGATTCAGTAAATGTCAGCTaGTTTGGTTCATGTCTAGTC +
Preference number: 4 (lower is better)
Translates to: ILLTDLTGTWSIPKESPDSVNVS*FGSCLV
Trigger: GACTAGACATGAACCAAATCAGCTGACATTTACTGA...ATCAGGAGATTCTTTAGGAATGGACCATGTACCAGTCAAGTCTGTCAGCAGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR GCA 90 bp CATGATGCTGTAAACCACGCACTGACAAACTTATCGTTACATTTCCATTGTGTCTCAGTCCATGTCAGTTaGTGCTCCTTGTGTCTAATC +
Preference number: 4 (lower is better)
Translates to: HDAVNHALTNLSLHFHCVSVHVS*CSLCLI
Trigger: GATTAGACACAAGGAGCAGCAACTGACATGGACTGA...GACACAATGGAAATGTAACGATAAGTTTGTCAGTGCGTGGTTTACAGCATCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR GCA 90 bp CATGATGCTGTAAACCACGCACTGACAAACTTATCGTTACATTTCCATTGTGTCGTAAATGTCAGCTCCTaGTGTCCCTGTCTAATCTCA +
Preference number: 4 (lower is better)
Translates to: HDAVNHALTNLSLHFHCVVNVSS*CPCLIS
Trigger: TGAGATTAGACAGGGACAGCAGGAGCTGACATTTAC...GACACAATGGAAATGTAACGATAAGTTTGTCAGTGCGTGGTTTACAGCATCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR GCA 90 bp CAGGAGTCTTTCATCCAAAGAACAGGGATGAAAAAGTGTGGGTATTTCTCTAATATTCACTGCAACCTCTaGCTCTGGGGTTCAAGCAAT +
Preference number: 4 (lower is better)
Translates to: QESFIQRTGMKKCGYFSNIHCNL*LWGSSN
Trigger: ATTGCTTGAACCCCAGAGGCAGAGGTTGCAGTGAAT...ATTAGAGAAATACCCACACTTTTTCATCCCTGTTCTTTGGATGAAAGACTCCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR GCA 90 bp GTGTCTAATCTCCTTGTTGGGATTGTGGACACAGTAGGTGTCGAGCGGATATCATGCATTATTACACAATaGATTTCAAAGCCAAGCAAG +
Preference number: 4 (lower is better)
Translates to: VSNLLVGIVDTVGVERISCIITQ*ISKPSK
Trigger: CTTGCTTGGCTTTGAAATGCATTGTGTAATAATGCA...TGATATCCGCTCGACACCTACTGTGTCCACAATCCCAACAAGGAGATTAGACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CCA 90 bp TCCCTCCAAATAAACTGTTCAATATCACTTCTCCATTCTTATCGTGTGCACAGTTCAAGGGGTGAACGATaGCGAGATATCTGTCAATGG +
Preference number: 4 (lower is better)
Translates to: SLQINCSISLLHSYRVHSSRGER*RDICQW
Trigger: CCATTGACAGATATCTCGCCATCGTTCACCCCTTGA...ACTGTGCACACGATAAGAATGGAGAAGTGATATTGAACAGTTTATTTGGAGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CCA 90 bp TTGCTGCTCCTTGTGTCTAATCTCCTTGTTGGGATTGTGGACACAGTAGGTGTCAAATGTCAGCTGATTTaGTTCATGTCTAGTCTCATT +
Preference number: 4 (lower is better)
Translates to: LLLLVSNLLVGIVDTVGVKCQLI*FMSSLI
Trigger: AATGAGACTAGACATGAACCAAATCAGCTGACATTT...GACACCTACTGTGTCCACAATCCCAACAAGGAGATTAGACACAAGGAGCAGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CCA 90 bp GTGTCTAATCTCCTTGTTGGGATTGTGGACACAGTAGGTGTCGAGCGGATATCAAAATGTCAGCTGATTTaGTTCATGTCTAGTCTCATT +
Preference number: 4 (lower is better)
Translates to: VSNLLVGIVDTVGVERISKCQLI*FMSSLI
Trigger: AATGAGACTAGACATGAACCAAATCAGCTGACATTT...TGATATCCGCTCGACACCTACTGTGTCCACAATCCCAACAAGGAGATTAGACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CCA 90 bp CTTGGGGTCACTGAGAATCTGAGGTTAAATTTCCCAGATTATAACCAAGAACAGCTGAACCCAGGTCTTTaGATTCTAGGTAGAGTTCCT +
Preference number: 4 (lower is better)
Translates to: LGVTENLRLNFPDYNQEQLNPGL*ILGRVP
Trigger: AGGAACTCTACCTAGAATCCAAAGACCTGGGTTCAG...CTGTTCTTGGTTATAATCTGGGAAATTTAACCTCAGATTCTCAGTGACCCCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CCA 90 bp CATGATGCTGTAAACCACGCACTGACAAACTTATCGTTACATTTCCATTGTGTCCTGAACCCAGGTCTTTaGATTCTAGGTAGAGTTCCT +
Preference number: 4 (lower is better)
Translates to: HDAVNHALTNLSLHFHCVLNPGL*ILGRVP
Trigger: AGGAACTCTACCTAGAATCCAAAGACCTGGGTTCAG...GACACAATGGAAATGTAACGATAAGTTTGTCAGTGCGTGGTTTACAGCATCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CCA 90 bp TCCTTAGCAAAATGCCCACAGAGATTATGTTCATTGCCAGTGGCAACCTCCACTATAAATCACAGTGGATaGGGTTTCCAAATAAACTCC +
Preference number: 4 (lower is better)
Translates to: SLAKCPQRLCSLPVATSTINHSG*GFQINS
Trigger: GGAGTTTATTTGGAAACCCCATCCACTGTGATTTAT...AGTGGAGGTTGCCACTGGCAATGAACATAATCTCTGTGGGCATTTTGCTAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CCA 90 bp CAGGAGTCTTTCATCCAAAGAACAGGGATGAAAAAGTGTGGGTATTTCTCTAATACAGGGATCCCTTTTTaGCCCACTGTAGACAAGGTA +
Preference number: 4 (lower is better)
Translates to: QESFIQRTGMKKCGYFSNTGIPF*PTVDKV
Trigger: TACCTTGTCTACAGTGGGCCAAAAAGGGATCCCTGT...ATTAGAGAAATACCCACACTTTTTCATCCCTGTTCTTTGGATGAAAGACTCCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CCA 90 bp CTTGGGGTCACTGAGAATCTGAGGTTAAATTTCCCAGATTATAACCAAGAACAGTTGGTCAAATATGGTTaGGTCAGTCCCAAACCAGGT +
Preference number: 4 (lower is better)
Translates to: LGVTENLRLNFPDYNQEQLVKYG*VSPKPG
Trigger: ACCTGGTTTGGGACTGACCCAACCATATTTGACCAA...CTGTTCTTGGTTATAATCTGGGAAATTTAACCTCAGATTCTCAGTGACCCCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR GCA 90 bp CAGGAGTCTTTCATCCAAAGAACAGGGATGAAAAAGTGTGGGTATTTCTCTAATTCAGTCCATGTCAGTTaGTGCTCCTTGTGTCTAATC +
Preference number: 4 (lower is better)
Translates to: QESFIQRTGMKKCGYFSNSVHVS*CSLCLI
Trigger: GATTAGACACAAGGAGCAGCAACTGACATGGACTGA...ATTAGAGAAATACCCACACTTTTTCATCCCTGTTCTTTGGATGAAAGACTCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR GCA 90 bp TCCCTCCAAATAAACTGTTCAATATCACTTCTCCATTCTTATCGTGTGCACAGTGTAAATGTCAGCTCCTaGTGTCCCTGTCTAATCTCA +
Preference number: 4 (lower is better)
Translates to: SLQINCSISLLHSYRVHSVNVSS*CPCLIS
Trigger: TGAGATTAGACAGGGACAGCAGGAGCTGACATTTAC...ACTGTGCACACGATAAGAATGGAGAAGTGATATTGAACAGTTTATTTGGAGGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR GCA 90 bp TGTCAGCTGATTTGGTTCATGTCTAGTCTCATTGTATGTTACGACTTTGCAGCAAGAGATTATGTTCATTaGCAGTGGCAACCTCCACTT +
Preference number: 4 (lower is better)
Translates to: CQLIWFMSSLIVCYDFAARDYVH*QWQPPL
Trigger: AAGTGGAGGTTGCCACTGGCAATGAACATAATCTCT...TGCTGCAAAGTCGTAACATACAATGAGACTAGACATGAACCAAATCAGCTGACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR GCA 90 bp TCCCTCCAAATAAACTGTTCAATATCACTTCTCCATTCTTATCGTGTGCACAGTTATGCAGCACTAGGGTaGTATTTTGCAACATGCAGG +
Preference number: 4 (lower is better)
Translates to: SLQINCSISLLHSYRVHSYAALG*YFATCR
Trigger: CCTGCATGTTGCAAAATAGCACCCTAGTGCTGCATA...ACTGTGCACACGATAAGAATGGAGAAGTGATATTGAACAGTTTATTTGGAGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR GCA 90 bp TCTAGGACAAAAAGGAACAGGGTGATGAATCCTGCTGACAGACTTGACTGGTACTGCATTATTACACAATaGATTTCAAAGCCAAGCAAG +
Preference number: 4 (lower is better)
Translates to: SRTKRNRVMNPADRLDWYCIITQ*ISKPSK
Trigger: CTTGCTTGGCTTTGAAATGCATTGTGTAATAATGCA...GTACCAGTCAAGTCTGTCAGCAGGATTCATCACCCTGTTCCTTTTTGTCCTAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR TCA 90 bp CATGATGCTGTAAACCACGCACTGACAAACTTATCGTTACATTTCCATTGTGTCTCAGTAAATGTCAGCTaGTTTGGTTCATGTCTAGTC +
Preference number: 4 (lower is better)
Translates to: HDAVNHALTNLSLHFHCVSVNVS*FGSCLV
Trigger: GACTAGACATGAACCAAATCAGCTGACATTTACTGA...GACACAATGGAAATGTAACGATAAGTTTGTCAGTGCGTGGTTTACAGCATCATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR TCA 90 bp CATGATGCTGTAAACCACGCACTGACAAACTTATCGTTACATTTCCATTGTGTCGCATCAGTGGGAAAGTaGTTTTTAGGTTCTTTCCTT +
Preference number: 4 (lower is better)
Translates to: HDAVNHALTNLSLHFHCVASVGK*FLGSFL
Trigger: AAGGAAAGAACCTAAAAATCACTTTCCCACTGATGC...GACACAATGGAAATGTAACGATAAGTTTGTCAGTGCGTGGTTTACAGCATCATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR TCA 90 bp TCCCTCCAAATAAACTGTTCAATATCACTTCTCCATTCTTATCGTGTGCACAGTTATCGTGTGCACAGTTaGAAAGCACATTCACAAACC +
Preference number: 4 (lower is better)
Translates to: SLQINCSISLLHSYRVHSYRVHS*KAHSQT
Trigger: GGTTTGTGAATGTGCTTTTCAACTGTGCACACGATA...ACTGTGCACACGATAAGAATGGAGAAGTGATATTGAACAGTTTATTTGGAGGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR GCA 90 bp TCCCTCCAAATAAACTGTTCAATATCACTTCTCCATTCTTATCGTGTGCACAGTGCCACTGAAATCCTTTaGACTGAGGAGGCAAAAATT +
Preference number: 4 (lower is better)
Translates to: SLQINCSISLLHSYRVHSATEIL*TEEAKI
Trigger: AATTTTTGCCTCCTCAGTGCAAAGGATTTCAGTGGC...ACTGTGCACACGATAAGAATGGAGAAGTGATATTGAACAGTTTATTTGGAGGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CCA 90 bp TGTCAGCTGATTTGGTTCATGTCTAGTCTCATTGTATGTTACGACTTTGCAGCACTAATCTCATTGGTGTaGTTTGCACACAGTACATGT +
Preference number: 4 (lower is better)
Translates to: CQLIWFMSSLIVCYDFAALISLV*FAHSTC
Trigger: ACATGTACTGTGTGCAAACCACACCAATGAGATTAG...TGCTGCAAAGTCGTAACATACAATGAGACTAGACATGAACCAAATCAGCTGACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR CAA 72 bp AAACCACGCACTGACAAACTTATCGTTACATTTCCATaGTGTCTAAGAGTCTTCTTCTATAGCCGTTGGTTG +
Preference number: 4 (lower is better)
Translates to: KPRTDKLIVTFP*CLRVFFYSRWL
Trigger: CAACCAACGGCTATAGAAGAAGACTCTTAGACACAATGGAAATGTAACGATAAGTTTGTCAGTGCGTGGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR GCA 90 bp CAGGAGTCTTTCATCCAAAGAACAGGGATGAAAAAGTGTGGGTATTTCTCTAATCAGTCCTTAGCAAAATaGCCACAGAGATTATGTTCA +
Preference number: 4 (lower is better)
Translates to: QESFIQRTGMKKCGYFSNQSLAK*PQRLCS
Trigger: TGAACATAATCTCTGTGGGCATTTTGCTAAGGACTG...ATTAGAGAAATACCCACACTTTTTCATCCCTGTTCTTTGGATGAAAGACTCCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CCA 90 bp CTTGGGGTCACTGAGAATCTGAGGTTAAATTTCCCAGATTATAACCAAGAACAGATAAATCACAGTGGATaGGGTTTCCAAATAAACTCC +
Preference number: 4 (lower is better)
Translates to: LGVTENLRLNFPDYNQEQINHSG*GFQINS
Trigger: GGAGTTTATTTGGAAACCCCATCCACTGTGATTTAT...CTGTTCTTGGTTATAATCTGGGAAATTTAACCTCAGATTCTCAGTGACCCCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CCA 90 bp TCCCTCCAAATAAACTGTTCAATATCACTTCTCCATTCTTATCGTGTGCACAGTGACTTGACTGGTACATaGTCCATTCCTAAAGAATCT +
Preference number: 4 (lower is better)
Translates to: SLQINCSISLLHSYRVHSDLTGT*SIPKES
Trigger: AGATTCTTTAGGAATGGACCATGTACCAGTCAAGTC...ACTGTGCACACGATAAGAATGGAGAAGTGATATTGAACAGTTTATTTGGAGGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CCA 90 bp CAGGAGTCTTTCATCCAAAGAACAGGGATGAAAAAGTGTGGGTATTTCTCTAATGACTTGACTGGTACATaGTCCATTCCTAAAGAATCT +
Preference number: 4 (lower is better)
Translates to: QESFIQRTGMKKCGYFSNDLTGT*SIPKES
Trigger: AGATTCTTTAGGAATGGACCATGTACCAGTCAAGTC...ATTAGAGAAATACCCACACTTTTTCATCCCTGTTCTTTGGATGAAAGACTCCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
3UTR CAA 72 bp CCATTGTGTCTAAGAGTCTTCTTCTATAGCCGTTGGTaGTTGTTGTTGTTGTTTTGTTGTTTGTTTGTTTGT +
Preference number: 4 (lower is better)
Translates to: PLCLRVFFYSRW*LLLLFCCLFVC
Trigger: ACAAACAAACAAACAACAAAACAACAACAACAACAACCAACGGCTATAGAAGAAGACTCTTAGACACAATGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS GCA 90 bp GGTGGATGCCCAGCTCCCCCACCCCACCGCGTGCTCTCGGGCTGGTaGGTCCAGGGCGCGGGCACCGTAGCTCCGGCCGCGCTGACGCGA +
Preference number: 5 (lower is better)
Translates to: GGCPAPPPHRVLSGW*VQGAGTVAPAALTR
Trigger: TCGCGTCAGCGCGGCCGGAGCTACGGTGCCCGCGCCCTGGACGCACCAGCCCGAGAGCACGCGGTGGGGTGGGGGAGCTGGGCATCCACC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678254.1
CDS CCA 90 bp GCCCCGGCGGGCTCCTCCGGCGTGTCAGGGTCTCTGGGTTCCAGCTaGAGTTGGCGCTCCGGCCCCACAGCTCTTTCCAGCGTCTCGGAC +
Preference number: 5 (lower is better)
Translates to: APAGSSGVSGSLGSS*SWRSGPTALSSVSD
Trigger: GTCCGAGACGCTGGAAAGAGCTGTGGGGCCGGAGCGCCAACTCCAGCTGGAACCCAGAGACCCTGACACGCCGGAGGAGCCCGCCGGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678254.1
CDS CCA 90 bp TGCGCTCTGCTGCTCCGGAAGCCGGATCGAGAGTCACAGTGTGGTTaGGCGCAGGCGGGCCGCTCGGTTTTCACCTCGAGGACCCGGACT +
Preference number: 5 (lower is better)
Translates to: CALLLRKPDRESQCG*AQAGRSVFTSRTRT
Trigger: AGTCCGGGTCCTCGAGGTGAAAACCGAGCGGCCCGCCTGCGCCCAACCACACTGTGACTCTCGATCCGGCTTCCGGAGCAGCAGAGCGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678059.1
ENST00000678254.1
CDS CCA 90 bp TCTGTGCGCTCTGCTGCTCCGGAAGCCGGATCGAGAGTCACAGTGTaGTTGGGCGCAGGCGGGCCGCTCGGTTTTCACCTCGAGGACCCG +
Preference number: 5 (lower is better)
Translates to: SVRSAAPEAGSRVTV*LGAGGPLGFHLEDP
Trigger: CGGGTCCTCGAGGTGAAAACCGAGCGGCCCGCCTGCGCCCAACCACACTGTGACTCTCGATCCGGCTTCCGGAGCAGCAGAGCGCACAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678059.1
ENST00000678254.1
CDS GCA 90 bp GCCATGGTGATGTCTGTCTCGGCGCCTCCTTTCTGTGCGCTCTGCTaGTCCGGAAGCCGGATCGAGAGTCACAGTGTGGTTGGGCGCAGG +
Preference number: 5 (lower is better)
Translates to: AMVMSVSAPPFCALC*SGSRIESHSVVGRR
Trigger: CCTGCGCCCAACCACACTGTGACTCTCGATCCGGCTTCCGGAGCAGCAGAGCGCACAGAAAGGAGGCGCCGAGACAGACATCACCATGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678254.1
CDS GCA 90 bp GCTGCCATGGTGATGTCTGTCTCGGCGCCTCCTTTCTGTGCGCTCTaGTGCTCCGGAAGCCGGATCGAGAGTCACAGTGTGGTTGGGCGC +
Preference number: 5 (lower is better)
Translates to: AAMVMSVSAPPFCAL*CSGSRIESHSVVGR
Trigger: GCGCCCAACCACACTGTGACTCTCGATCCGGCTTCCGGAGCAGCAGAGCGCACAGAAAGGAGGCGCCGAGACAGACATCACCATGGCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678254.1
CDS GCA 90 bp ATAATCACCATAACTGTCTCGGCGCCTCCTTTCTGTGCGCTCTGCTaGTCCGGAAGCCGGATCGAGAGTCACAGTGTGGTTGGGCGCAGG +
Preference number: 5 (lower is better)
Translates to: IITITVSAPPFCALC*SGSRIESHSVVGRR
Trigger: CCTGCGCCCAACCACACTGTGACTCTCGATCCGGCTTCCGGAGCAGCAGAGCGCACAGAAAGGAGGCGCCGAGACAGTTATGGTGATTAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678059.1
CDS GCA 90 bp GTCATAATCACCATAACTGTCTCGGCGCCTCCTTTCTGTGCGCTCTaGTGCTCCGGAAGCCGGATCGAGAGTCACAGTGTGGTTGGGCGC +
Preference number: 5 (lower is better)
Translates to: VIITITVSAPPFCAL*CSGSRIESHSVVGR
Trigger: GCGCCCAACCACACTGTGACTCTCGATCCGGCTTCCGGAGCAGCAGAGCGCACAGAAAGGAGGCGCCGAGACAGTTATGGTGATTATGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678059.1
CDS-3UTR CAA 90 bp TCCTTAGCAAAATGCCCACAGAGATTATGTTCATTGCCAGTGGCAACCTCCACTGGGTTCCAGCTGGAGTaGGCGCTCCGGCCCCACAGC +
Preference number: 5 (lower is better)
Translates to: SLAKCPQRLCSLPVATSTGFQLE*ALRPHS
Trigger: GCTGTGGGGCCGGAGCGCCAACTCCAGCTGGAACCC...AGTGGAGGTTGCCACTGGCAATGAACATAATCTCTGTGGGCATTTTGCTAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CAA 90 bp TCTAGGACAAAAAGGAACAGGGTGATGAATCCTGCTGACAGACTTGACTGGTACGGGTTCCAGCTGGAGTaGGCGCTCCGGCCCCACAGC +
Preference number: 5 (lower is better)
Translates to: SRTKRNRVMNPADRLDWYGFQLE*ALRPHS
Trigger: GCTGTGGGGCCGGAGCGCCAACTCCAGCTGGAACCC...GTACCAGTCAAGTCTGTCAGCAGGATTCATCACCCTGTTCCTTTTTGTCCTAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CAA 90 bp GTGTCTAATCTCCTTGTTGGGATTGTGGACACAGTAGGTGTCGAGCGGATATCAGACCCGGACTTGCACTaGCAGAGCCGCTGCGTGGGG +
Preference number: 5 (lower is better)
Translates to: VSNLLVGIVDTVGVERISDPDLH*QSRCVG
Trigger: CCCCACGCAGCGGCTCTGCAAGTGCAAGTCCGGGTC...TGATATCCGCTCGACACCTACTGTGTCCACAATCCCAACAAGGAGATTAGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CAA 90 bp GAGCCACTGAAATCCTTTGCACTGAGGAGGCAAAAATTGACACCTCAGGATTACGACCCGGACTTGCACTaGCAGAGCCGCTGCGTGGGG +
Preference number: 5 (lower is better)
Translates to: EPLKSFALRRQKLTPQDYDPDLH*QSRCVG
Trigger: CCCCACGCAGCGGCTCTGCAAGTGCAAGTCCGGGTC...GTAATCCTGAGGTGTCAATTTTTGCCTCCTCAGTGCAAAGGATTTCAGTGGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CAA 90 bp AGAACAGGGATCCCTTTTTGGCCCACTGTAGACAAGGTACACTGTGAAGTCTTCCTCGAGGACCCGGACTaGCACTTGCAGAGCCGCTGC +
Preference number: 5 (lower is better)
Translates to: RTGIPFWPTVDKVHCEVFLEDPD*HLQSRC
Trigger: GCAGCGGCTCTGCAAGTGCAAGTCCGGGTCCTCGAG...GAAGACTTCACAGTGTACCTTGTCTACAGTGGGCCAAAAAGGGATCCCTGTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CAA 90 bp ATCCTGCTGACAGACTTGACTGGTACATGGTCCATTCCTAAAGAATCTCCTGATAGAGTCACAGTGTGGTaGGGCGCAGGCGGGCCGCTC +
Preference number: 5 (lower is better)
Translates to: ILLTDLTGTWSIPKESPDRVTVW*GAGGPL
Trigger: GAGCGGCCCGCCTGCGCCCAACCACACTGTGACTCT...ATCAGGAGATTCTTTAGGAATGGACCATGTACCAGTCAAGTCTGTCAGCAGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CAA 90 bp ATCCTGCTGACAGACTTGACTGGTACATGGTCCATTCCTAAAGAATCTCCTGATAGGTCAGCACTGGACTaGCTCCCCCGCTGGGAGGGA +
Preference number: 5 (lower is better)
Translates to: ILLTDLTGTWSIPKESPDRSALD*LPRWEG
Trigger: TCCCTCCCAGCGGGGGAGCAAGTCCAGTGCTGACCT...ATCAGGAGATTCTTTAGGAATGGACCATGTACCAGTCAAGTCTGTCAGCAGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CAA 90 bp ATCCTGCTGACAGACTTGACTGGTACATGGTCCATTCCTAAAGAATCTCCTGATCTCGAGGACCCGGACTaGCACTTGCAGAGCCGCTGC +
Preference number: 5 (lower is better)
Translates to: ILLTDLTGTWSIPKESPDLEDPD*HLQSRC
Trigger: GCAGCGGCTCTGCAAGTGCAAGTCCGGGTCCTCGAG...ATCAGGAGATTCTTTAGGAATGGACCATGTACCAGTCAAGTCTGTCAGCAGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CAA 90 bp ATCCTGCTGACAGACTTGACTGGTACATGGTCCATTCCTAAAGAATCTCCTGATCATGGTGATGTCTGCTaGGAGCCAGCCCCGACGCAT +
Preference number: 5 (lower is better)
Translates to: ILLTDLTGTWSIPKESPDHGDVC*EPAPTH
Trigger: ATGCGTCGGGGCTGGCTCCAAGCAGACATCACCATG...ATCAGGAGATTCTTTAGGAATGGACCATGTACCAGTCAAGTCTGTCAGCAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217270.4
CDS-3UTR CAA 90 bp TTGCTGCTCCTTGTGTCTAATCTCCTTGTTGGGATTGTGGACACAGTAGGTGTCGGAGGAGGCATGGTCTaGGGGTGGATTAAAGTTGGG +
Preference number: 5 (lower is better)
Translates to: LLLLVSNLLVGIVDTVGVGGGMV*GWIKVG
Trigger: CCCAACTTTAATCCACCCCAAGACCATGCCTCCTCC...GACACCTACTGTGTCCACAATCCCAACAAGGAGATTAGACACAAGGAGCAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217270.4
ENST00000678254.1
CDS-3UTR CAA 90 bp AGAACAGGGATCCCTTTTTGGCCCACTGTAGACAAGGTACACTGTGAAGTCTTCATGCCAATGACGATCTaGGCTGCGAAGAAGGTCCGG +
Preference number: 5 (lower is better)
Translates to: RTGIPFWPTVDKVHCEVFMPMTI*AAKKVR
Trigger: CCGGACCTTCTTCGCAGCCAAGATCGTCATTGGCAT...GAAGACTTCACAGTGTACCTTGTCTACAGTGGGCCAAAAAGGGATCCCTGTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CAA 90 bp CATGATGCTGTAAACCACGCACTGACAAACTTATCGTTACATTTCCATTGTGTCAGGTCAGCACTGGACTaGCTCCCCCGCTGGGAGGGA +
Preference number: 5 (lower is better)
Translates to: HDAVNHALTNLSLHFHCVRSALD*LPRWEG
Trigger: TCCCTCCCAGCGGGGGAGCAAGTCCAGTGCTGACCT...GACACAATGGAAATGTAACGATAAGTTTGTCAGTGCGTGGTTTACAGCATCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CAA 90 bp CAGGAGTCTTTCATCCAAAGAACAGGGATGAAAAAGTGTGGGTATTTCTCTAATAGAGTCACAGTGTGGTaGGGCGCAGGCGGGCCGCTC +
Preference number: 5 (lower is better)
Translates to: QESFIQRTGMKKCGYFSNRVTVW*GAGGPL
Trigger: GAGCGGCCCGCCTGCGCCCAACCACACTGTGACTCT...ATTAGAGAAATACCCACACTTTTTCATCCCTGTTCTTTGGATGAAAGACTCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000678059.1
ENST00000678254.1
CDS CCA 90 bp CCAGACCAAGGCGATCAGGAAGGAGGCCGTTTGATAATTCATCCGTaGTTTCAAGGGGTGAACGATGGCGAGATATCTGTCAATGGCAAT +
Preference number: 5 (lower is better)
Translates to: PDQGDQEGGRLIIHP*FQGVNDGEISVNGN
Trigger: ATTGCCATTGACAGATATCTCGCCATCGTTCACCCCTTGAAACCACGGATGAATTATCAAACGGCCTCCTTCCTGATCGCCTTGGTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CAA 90 bp TCCTTAGCAAAATGCCCACAGAGATTATGTTCATTGCCAGTGGCAACCTCCACTGGAGGAGGCATGGTCTaGGGGTGGATTAAAGTTGGG +
Preference number: 5 (lower is better)
Translates to: SLAKCPQRLCSLPVATSTGGGMV*GWIKVG
Trigger: CCCAACTTTAATCCACCCCAAGACCATGCCTCCTCC...AGTGGAGGTTGCCACTGGCAATGAACATAATCTCTGTGGGCATTTTGCTAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217270.4
ENST00000678254.1
CDS-3UTR CAA 90 bp GTGTCTAATCTCCTTGTTGGGATTGTGGACACAGTAGGTGTCGAGCGGATATCAAAGAAGGTCCGGGTCTaGGTCATGTCCTCATCCTCA +
Preference number: 5 (lower is better)
Translates to: VSNLLVGIVDTVGVERISKKVRV*VMSSSS
Trigger: TGAGGATGAGGACATGACCAAGACCCGGACCTTCTT...TGATATCCGCTCGACACCTACTGTGTCCACAATCCCAACAAGGAGATTAGACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CAA 90 bp TTGCTGCTCCTTGTGTCTAATCTCCTTGTTGGGATTGTGGACACAGTAGGTGTCAAGAAGGTCCGGGTCTaGGTCATGTCCTCATCCTCA +
Preference number: 5 (lower is better)
Translates to: LLLLVSNLLVGIVDTVGVKKVRV*VMSSSS
Trigger: TGAGGATGAGGACATGACCAAGACCCGGACCTTCTT...GACACCTACTGTGTCCACAATCCCAACAAGGAGATTAGACACAAGGAGCAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CAA 90 bp TCTAGGACAAAAAGGAACAGGGTGATGAATCCTGCTGACAGACTTGACTGGTACATGCCAATGACGATCTaGGCTGCGAAGAAGGTCCGG +
Preference number: 5 (lower is better)
Translates to: SRTKRNRVMNPADRLDWYMPMTI*AAKKVR
Trigger: CCGGACCTTCTTCGCAGCCAAGATCGTCATTGGCAT...GTACCAGTCAAGTCTGTCAGCAGGATTCATCACCCTGTTCCTTTTTGTCCTAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CAA 90 bp CAGGAGTCTTTCATCCAAAGAACAGGGATGAAAAAGTGTGGGTATTTCTCTAATAGGTCAGCACTGGACTaGCTCCCCCGCTGGGAGGGA +
Preference number: 5 (lower is better)
Translates to: QESFIQRTGMKKCGYFSNRSALD*LPRWEG
Trigger: TCCCTCCCAGCGGGGGAGCAAGTCCAGTGCTGACCT...ATTAGAGAAATACCCACACTTTTTCATCCCTGTTCTTTGGATGAAAGACTCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CAA 90 bp GAGCCACTGAAATCCTTTGCACTGAGGAGGCAAAAATTGACACCTCAGGATTACAAGAAGGTCCGGGTCTaGGTCATGTCCTCATCCTCA +
Preference number: 5 (lower is better)
Translates to: EPLKSFALRRQKLTPQDYKKVRV*VMSSSS
Trigger: TGAGGATGAGGACATGACCAAGACCCGGACCTTCTT...GTAATCCTGAGGTGTCAATTTTTGCCTCCTCAGTGCAAAGGATTTCAGTGGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CAA 90 bp TTGCTGCTCCTTGTGTCTAATCTCCTTGTTGGGATTGTGGACACAGTAGGTGTCAGAGGACCGTTTCTGTaGCAAAGTAAGCCGATGGGA +
Preference number: 5 (lower is better)
Translates to: LLLLVSNLLVGIVDTVGVRGPFL*QSKPMG
Trigger: TCCCATCGGCTTACTTTGCAACAGAAACGGTCCTCT...GACACCTACTGTGTCCACAATCCCAACAAGGAGATTAGACACAAGGAGCAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CAA 90 bp TGTCAGCTGATTTGGTTCATGTCTAGTCTCATTGTATGTTACGACTTTGCAGCAGTGGTGGGCACCCCGTaGGTTCTGAGGTCAAGGTCA +
Preference number: 5 (lower is better)
Translates to: CQLIWFMSSLIVCYDFAAVVGTP*VLRSRS
Trigger: TGACCTTGACCTCAGAACCAACGGGGTGCCCACCAC...TGCTGCAAAGTCGTAACATACAATGAGACTAGACATGAACCAAATCAGCTGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CAA 90 bp TGTCAGCTGATTTGGTTCATGTCTAGTCTCATTGTATGTTACGACTTTGCAGCAGCAGCATTCAGCTTCTaGAGGGCACGGGGGAGGCAT +
Preference number: 5 (lower is better)
Translates to: CQLIWFMSSLIVCYDFAAAAFSF*RARGRH
Trigger: ATGCCTCCCCCGTGCCCTCAAGAAGCTGAATGCTGC...TGCTGCAAAGTCGTAACATACAATGAGACTAGACATGAACCAAATCAGCTGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CAA 90 bp GAGCCACTGAAATCCTTTGCACTGAGGAGGCAAAAATTGACACCTCAGGATTACAGAGGACCGTTTCTGTaGCAAAGTAAGCCGATGGGA +
Preference number: 5 (lower is better)
Translates to: EPLKSFALRRQKLTPQDYRGPFL*QSKPMG
Trigger: TCCCATCGGCTTACTTTGCAACAGAAACGGTCCTCT...GTAATCCTGAGGTGTCAATTTTTGCCTCCTCAGTGCAAAGGATTTCAGTGGCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CAA 90 bp CAGGAGTCTTTCATCCAAAGAACAGGGATGAAAAAGTGTGGGTATTTCTCTAATGTGGTGGGCACCCCGTaGGTTCTGAGGTCAAGGTCA +
Preference number: 5 (lower is better)
Translates to: QESFIQRTGMKKCGYFSNVVGTP*VLRSRS
Trigger: TGACCTTGACCTCAGAACCAACGGGGTGCCCACCAC...ATTAGAGAAATACCCACACTTTTTCATCCCTGTTCTTTGGATGAAAGACTCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CAA 90 bp GAGCCACTGAAATCCTTTGCACTGAGGAGGCAAAAATTGACACCTCAGGATTACGACTGGGGTTTTCAATaGTGTGACACCAGTGGGTCA +
Preference number: 5 (lower is better)
Translates to: EPLKSFALRRQKLTPQDYDWGFQ*CDTSGS
Trigger: TGACCCACTGGTGTCACACAATTGAAAACCCCAGTC...GTAATCCTGAGGTGTCAATTTTTGCCTCCTCAGTGCAAAGGATTTCAGTGGCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CAA 90 bp GTGTCTAATCTCCTTGTTGGGATTGTGGACACAGTAGGTGTCGAGCGGATATCACTGAGGAGGCAAAAATaGACACCTCAGGATTACCCA +
Preference number: 5 (lower is better)
Translates to: VSNLLVGIVDTVGVERISLRRQK*TPQDYP
Trigger: TGGGTAATCCTGAGGTGTCAATTTTTGCCTCCTCAG...TGATATCCGCTCGACACCTACTGTGTCCACAATCCCAACAAGGAGATTAGACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CAA 90 bp TTGCTGCTCCTTGTGTCTAATCTCCTTGTTGGGATTGTGGACACAGTAGGTGTCCAGAGATTATGTTCATaGCCAGTGGCAACCTCCACT +
Preference number: 5 (lower is better)
Translates to: LLLLVSNLLVGIVDTVGVQRLCS*PVATST
Trigger: AGTGGAGGTTGCCACTGGCAATGAACATAATCTCTG...GACACCTACTGTGTCCACAATCCCAACAAGGAGATTAGACACAAGGAGCAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CAA 90 bp AGAACAGGGATCCCTTTTTGGCCCACTGTAGACAAGGTACACTGTGAAGTCTTCATTGGTCAAATATGGTaGGGTCAGTCCCAAACCAGG +
Preference number: 5 (lower is better)
Translates to: RTGIPFWPTVDKVHCEVFIGQIW*GQSQTR
Trigger: CCTGGTTTGGGACTGACCCAACCATATTTGACCAAT...GAAGACTTCACAGTGTACCTTGTCTACAGTGGGCCAAAAAGGGATCCCTGTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CAA 90 bp TGTCAGCTGATTTGGTTCATGTCTAGTCTCATTGTATGTTACGACTTTGCAGCAATGCCAATGACGATCTaGGCTGCGAAGAAGGTCCGG +
Preference number: 5 (lower is better)
Translates to: CQLIWFMSSLIVCYDFAAMPMTI*AAKKVR
Trigger: CCGGACCTTCTTCGCAGCCAAGATCGTCATTGGCAT...TGCTGCAAAGTCGTAACATACAATGAGACTAGACATGAACCAAATCAGCTGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CAA 90 bp TCTAGGACAAAAAGGAACAGGGTGATGAATCCTGCTGACAGACTTGACTGGTACCAGGAAGGAGGCCGTTaGATAATTCATCCGTGGTTT +
Preference number: 5 (lower is better)
Translates to: SRTKRNRVMNPADRLDWYQEGGR*IIHPWF
Trigger: AAACCACGGATGAATTATCAAACGGCCTCCTTCCTG...GTACCAGTCAAGTCTGTCAGCAGGATTCATCACCCTGTTCCTTTTTGTCCTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CAA 90 bp GAGCCACTGAAATCCTTTGCACTGAGGAGGCAAAAATTGACACCTCAGGATTACCAGGAAGGAGGCCGTTaGATAATTCATCCGTGGTTT +
Preference number: 5 (lower is better)
Translates to: EPLKSFALRRQKLTPQDYQEGGR*IIHPWF
Trigger: AAACCACGGATGAATTATCAAACGGCCTCCTTCCTG...GTAATCCTGAGGTGTCAATTTTTGCCTCCTCAGTGCAAAGGATTTCAGTGGCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CAA 90 bp GCATTTTCTGAGAGTACAATGATTGGGCTGAAGGTGAGTCTGCTGGGTGGTGATATCTTCTCCTGGCTCTaGACAATAAAGAGGACCGTT +
Preference number: 5 (lower is better)
Translates to: AFSESTMIGLKVSLLGGDIFSWL*TIKRTV
Trigger: AACGGTCCTCTTTATTGTCAAGAGCCAGGAGAAGAT...ATCACCACCCAGCAGACTCACCTTCAGCCCAATCATTGTACTCTCAGAAAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CAA 90 bp TTGCTGCTCCTTGTGTCTAATCTCCTTGTTGGGATTGTGGACACAGTAGGTGTCAAGTACTTCATGGTGTaGTTCTTGACCGTCACGAAG +
Preference number: 5 (lower is better)
Translates to: LLLLVSNLLVGIVDTVGVKYFMV*FLTVTK
Trigger: CTTCGTGACGGTCAAGAACAACACCATGAAGTACTT...GACACCTACTGTGTCCACAATCCCAACAAGGAGATTAGACACAAGGAGCAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CAA 90 bp GTGTCTAATCTCCTTGTTGGGATTGTGGACACAGTAGGTGTCGAGCGGATATCATTCAGTCCATGTCAGTaGCTGCTCCTTGTGTCTAAT +
Preference number: 5 (lower is better)
Translates to: VSNLLVGIVDTVGVERISFSPCQ*LLLVSN
Trigger: ATTAGACACAAGGAGCAGCAACTGACATGGACTGAA...TGATATCCGCTCGACACCTACTGTGTCCACAATCCCAACAAGGAGATTAGACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CAA 90 bp TTGCTGCTCCTTGTGTCTAATCTCCTTGTTGGGATTGTGGACACAGTAGGTGTCTTCAGTCCATGTCAGTaGCTGCTCCTTGTGTCTAAT +
Preference number: 5 (lower is better)
Translates to: LLLLVSNLLVGIVDTVGVFSPCQ*LLLVSN
Trigger: ATTAGACACAAGGAGCAGCAACTGACATGGACTGAA...GACACCTACTGTGTCCACAATCCCAACAAGGAGATTAGACACAAGGAGCAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CAA 90 bp TCTAGGACAAAAAGGAACAGGGTGATGAATCCTGCTGACAGACTTGACTGGTACCTGAGGAGGCAAAAATaGACACCTCAGGATTACCCA +
Preference number: 5 (lower is better)
Translates to: SRTKRNRVMNPADRLDWYLRRQK*TPQDYP
Trigger: TGGGTAATCCTGAGGTGTCAATTTTTGCCTCCTCAG...GTACCAGTCAAGTCTGTCAGCAGGATTCATCACCCTGTTCCTTTTTGTCCTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CAA 90 bp TGTCAGCTGATTTGGTTCATGTCTAGTCTCATTGTATGTTACGACTTTGCAGCAGGGTTTTTGGCCATGTaGGCCAGGCTGGTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: CQLIWFMSSLIVCYDFAAGFLAM*ARLVLN
Trigger: GTTCAAGACCAGCCTGGCCAACATGGCCAAAAACCC...TGCTGCAAAGTCGTAACATACAATGAGACTAGACATGAACCAAATCAGCTGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CAA 90 bp CATGATGCTGTAAACCACGCACTGACAAACTTATCGTTACATTTCCATTGTGTCGGGTTTTTGGCCATGTaGGCCAGGCTGGTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: HDAVNHALTNLSLHFHCVGFLAM*ARLVLN
Trigger: GTTCAAGACCAGCCTGGCCAACATGGCCAAAAACCC...GACACAATGGAAATGTAACGATAAGTTTGTCAGTGCGTGGTTTACAGCATCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CAA 90 bp GAGCCACTGAAATCCTTTGCACTGAGGAGGCAAAAATTGACACCTCAGGATTACATCCTGCTGACAGACTaGACTGGTACATGGTCCATT +
Preference number: 5 (lower is better)
Translates to: EPLKSFALRRQKLTPQDYILLTD*TGTWSI
Trigger: AATGGACCATGTACCAGTCAAGTCTGTCAGCAGGAT...GTAATCCTGAGGTGTCAATTTTTGCCTCCTCAGTGCAAAGGATTTCAGTGGCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CAA 90 bp TCTAGGACAAAAAGGAACAGGGTGATGAATCCTGCTGACAGACTTGACTGGTACAAGTACTTCATGGTGTaGTTCTTGACCGTCACGAAG +
Preference number: 5 (lower is better)
Translates to: SRTKRNRVMNPADRLDWYKYFMV*FLTVTK
Trigger: CTTCGTGACGGTCAAGAACAACACCATGAAGTACTT...GTACCAGTCAAGTCTGTCAGCAGGATTCATCACCCTGTTCCTTTTTGTCCTAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CAA 90 bp GAGCCACTGAAATCCTTTGCACTGAGGAGGCAAAAATTGACACCTCAGGATTACAAGTACTTCATGGTGTaGTTCTTGACCGTCACGAAG +
Preference number: 5 (lower is better)
Translates to: EPLKSFALRRQKLTPQDYKYFMV*FLTVTK
Trigger: CTTCGTGACGGTCAAGAACAACACCATGAAGTACTT...GTAATCCTGAGGTGTCAATTTTTGCCTCCTCAGTGCAAAGGATTTCAGTGGCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CAA 90 bp TCCTTAGCAAAATGCCCACAGAGATTATGTTCATTGCCAGTGGCAACCTCCACTTTGTGTCTAATCTCCTaGTTGGGATTGTGGACACAG +
Preference number: 5 (lower is better)
Translates to: SLAKCPQRLCSLPVATSTLCLIS*LGLWTQ
Trigger: CTGTGTCCACAATCCCAACAAGGAGATTAGACACAA...AGTGGAGGTTGCCACTGGCAATGAACATAATCTCTGTGGGCATTTTGCTAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CAA 90 bp GAGCCACTGAAATCCTTTGCACTGAGGAGGCAAAAATTGACACCTCAGGATTACTCTCATTGGTGTGGTTaGCACACAGTACATGTTCAG +
Preference number: 5 (lower is better)
Translates to: EPLKSFALRRQKLTPQDYSHWCG*HTVHVQ
Trigger: CTGAACATGTACTGTGTGCAAACCACACCAATGAGA...GTAATCCTGAGGTGTCAATTTTTGCCTCCTCAGTGCAAAGGATTTCAGTGGCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CAA 90 bp TCTAGGACAAAAAGGAACAGGGTGATGAATCCTGCTGACAGACTTGACTGGTACTCTCATTGGTGTGGTTaGCACACAGTACATGTTCAG +
Preference number: 5 (lower is better)
Translates to: SRTKRNRVMNPADRLDWYSHWCG*HTVHVQ
Trigger: CTGAACATGTACTGTGTGCAAACCACACCAATGAGA...GTACCAGTCAAGTCTGTCAGCAGGATTCATCACCCTGTTCCTTTTTGTCCTAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CAA 90 bp ATCCTGCTGACAGACTTGACTGGTACATGGTCCATTCCTAAAGAATCTCCTGATCTGAGGAGGCAAAAATaGACACCTCAGGATTACCCA +
Preference number: 5 (lower is better)
Translates to: ILLTDLTGTWSIPKESPDLRRQK*TPQDYP
Trigger: TGGGTAATCCTGAGGTGTCAATTTTTGCCTCCTCAG...ATCAGGAGATTCTTTAGGAATGGACCATGTACCAGTCAAGTCTGTCAGCAGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CAA 90 bp ATCCTGCTGACAGACTTGACTGGTACATGGTCCATTCCTAAAGAATCTCCTGATATCTTCTCCTGGCTCTaGACAATAAAGAGGACCGTT +
Preference number: 5 (lower is better)
Translates to: ILLTDLTGTWSIPKESPDIFSWL*TIKRTV
Trigger: AACGGTCCTCTTTATTGTCAAGAGCCAGGAGAAGAT...ATCAGGAGATTCTTTAGGAATGGACCATGTACCAGTCAAGTCTGTCAGCAGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CAA 90 bp AGAACAGGGATCCCTTTTTGGCCCACTGTAGACAAGGTACACTGTGAAGTCTTCTCATGTCTAGTCTCATaGTATGTTACGACTTTGCAG +
Preference number: 5 (lower is better)
Translates to: RTGIPFWPTVDKVHCEVFSCLVS*YVTTLQ
Trigger: CTGCAAAGTCGTAACATACAATGAGACTAGACATGA...GAAGACTTCACAGTGTACCTTGTCTACAGTGGGCCAAAAAGGGATCCCTGTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CAA 90 bp GTGTCTAATCTCCTTGTTGGGATTGTGGACACAGTAGGTGTCGAGCGGATATCATCATGTCTAGTCTCATaGTATGTTACGACTTTGCAG +
Preference number: 5 (lower is better)
Translates to: VSNLLVGIVDTVGVERISSCLVS*YVTTLQ
Trigger: CTGCAAAGTCGTAACATACAATGAGACTAGACATGA...TGATATCCGCTCGACACCTACTGTGTCCACAATCCCAACAAGGAGATTAGACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CAA 90 bp CAGGAGTCTTTCATCCAAAGAACAGGGATGAAAAAGTGTGGGTATTTCTCTAATAGAGGACCGTTTCTGTaGCAAAGTAAGCCGATGGGA +
Preference number: 5 (lower is better)
Translates to: QESFIQRTGMKKCGYFSNRGPFL*QSKPMG
Trigger: TCCCATCGGCTTACTTTGCAACAGAAACGGTCCTCT...ATTAGAGAAATACCCACACTTTTTCATCCCTGTTCTTTGGATGAAAGACTCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CAA 90 bp TCCCTCCAAATAAACTGTTCAATATCACTTCTCCATTCTTATCGTGTGCACAGTGACTGGGGTTTTCAATaGTGTGACACCAGTGGGTCA +
Preference number: 5 (lower is better)
Translates to: SLQINCSISLLHSYRVHSDWGFQ*CDTSGS
Trigger: TGACCCACTGGTGTCACACAATTGAAAACCCCAGTC...ACTGTGCACACGATAAGAATGGAGAAGTGATATTGAACAGTTTATTTGGAGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CAA 90 bp GCATTTTCTGAGAGTACAATGATTGGGCTGAAGGTGAGTCTGCTGGGTGGTGATTTCTATAGCCGTTGGTaGTTGTTGTTGTTGTTTTGT +
Preference number: 5 (lower is better)
Translates to: AFSESTMIGLKVSLLGGDFYSRW*LLLLFC
Trigger: ACAAAACAACAACAACAACAACCAACGGCTATAGAA...ATCACCACCCAGCAGACTCACCTTCAGCCCAATCATTGTACTCTCAGAAAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CAA 90 bp GTGTCTAATCTCCTTGTTGGGATTGTGGACACAGTAGGTGTCGAGCGGATATCAATCGTTACATTTCCATaGTGTCTAAGAGTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: VSNLLVGIVDTVGVERISIVTFP*CLRVFF
Trigger: GAAGAAGACTCTTAGACACAATGGAAATGTAACGAT...TGATATCCGCTCGACACCTACTGTGTCCACAATCCCAACAAGGAGATTAGACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CAA 90 bp GCATTTTCTGAGAGTACAATGATTGGGCTGAAGGTGAGTCTGCTGGGTGGTGATATCGTTACATTTCCATaGTGTCTAAGAGTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: AFSESTMIGLKVSLLGGDIVTFP*CLRVFF
Trigger: GAAGAAGACTCTTAGACACAATGGAAATGTAACGAT...ATCACCACCCAGCAGACTCACCTTCAGCCCAATCATTGTACTCTCAGAAAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CAA 90 bp CATGATGCTGTAAACCACGCACTGACAAACTTATCGTTACATTTCCATTGTGTCATTGGTCAAATATGGTaGGGTCAGTCCCAAACCAGG +
Preference number: 5 (lower is better)
Translates to: HDAVNHALTNLSLHFHCVIGQIW*GQSQTR
Trigger: CCTGGTTTGGGACTGACCCAACCATATTTGACCAAT...GACACAATGGAAATGTAACGATAAGTTTGTCAGTGCGTGGTTTACAGCATCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CAA 90 bp CATGATGCTGTAAACCACGCACTGACAAACTTATCGTTACATTTCCATTGTGTCATCCTGCTGACAGACTaGACTGGTACATGGTCCATT +
Preference number: 5 (lower is better)
Translates to: HDAVNHALTNLSLHFHCVILLTD*TGTWSI
Trigger: AATGGACCATGTACCAGTCAAGTCTGTCAGCAGGAT...GACACAATGGAAATGTAACGATAAGTTTGTCAGTGCGTGGTTTACAGCATCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CAA 90 bp CTTGGGGTCACTGAGAATCTGAGGTTAAATTTCCCAGATTATAACCAAGAACAGTGGGGTGGATTAAAGTaGGGTGTGAAACTGGTGTTT +
Preference number: 5 (lower is better)
Translates to: LGVTENLRLNFPDYNQEQWGGLK*GVKLVF
Trigger: AAACACCAGTTTCACACCCAACTTTAATCCACCCCA...CTGTTCTTGGTTATAATCTGGGAAATTTAACCTCAGATTCTCAGTGACCCCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217270.4
ENST00000678254.1
CDS-3UTR CAA 90 bp TGTCAGCTGATTTGGTTCATGTCTAGTCTCATTGTATGTTACGACTTTGCAGCATTGTGTCTAATCTCCTaGTTGGGATTGTGGACACAG +
Preference number: 5 (lower is better)
Translates to: CQLIWFMSSLIVCYDFAALCLIS*LGLWTQ
Trigger: CTGTGTCCACAATCCCAACAAGGAGATTAGACACAA...TGCTGCAAAGTCGTAACATACAATGAGACTAGACATGAACCAAATCAGCTGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CAA 90 bp CATGATGCTGTAAACCACGCACTGACAAACTTATCGTTACATTTCCATTGTGTCTTGTGTCTAATCTCCTaGTTGGGATTGTGGACACAG +
Preference number: 5 (lower is better)
Translates to: HDAVNHALTNLSLHFHCVLCLIS*LGLWTQ
Trigger: CTGTGTCCACAATCCCAACAAGGAGATTAGACACAA...GACACAATGGAAATGTAACGATAAGTTTGTCAGTGCGTGGTTTACAGCATCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CAA 90 bp CATGATGCTGTAAACCACGCACTGACAAACTTATCGTTACATTTCCATTGTGTCTTCAGTCCATGTCAGTaGCTGCTCCTTGTGTCTAAT +
Preference number: 5 (lower is better)
Translates to: HDAVNHALTNLSLHFHCVFSPCQ*LLLVSN
Trigger: ATTAGACACAAGGAGCAGCAACTGACATGGACTGAA...GACACAATGGAAATGTAACGATAAGTTTGTCAGTGCGTGGTTTACAGCATCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CAA 90 bp CAGGAGTCTTTCATCCAAAGAACAGGGATGAAAAAGTGTGGGTATTTCTCTAATCCCTGTCTAATCTCATaGGTGTGGTTTGCACACAGT +
Preference number: 5 (lower is better)
Translates to: QESFIQRTGMKKCGYFSNPCLIS*VWFAHS
Trigger: ACTGTGTGCAAACCACACCAATGAGATTAGACAGGG...ATTAGAGAAATACCCACACTTTTTCATCCCTGTTCTTTGGATGAAAGACTCCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CAA 90 bp TCCTTAGCAAAATGCCCACAGAGATTATGTTCATTGCCAGTGGCAACCTCCACTTTCTATAGCCGTTGGTaGTTGTTGTTGTTGTTTTGT +
Preference number: 5 (lower is better)
Translates to: SLAKCPQRLCSLPVATSTFYSRW*LLLLFC
Trigger: ACAAAACAACAACAACAACAACCAACGGCTATAGAA...AGTGGAGGTTGCCACTGGCAATGAACATAATCTCTGTGGGCATTTTGCTAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CAA 90 bp GAGCCACTGAAATCCTTTGCACTGAGGAGGCAAAAATTGACACCTCAGGATTACATCGTTACATTTCCATaGTGTCTAAGAGTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: EPLKSFALRRQKLTPQDYIVTFP*CLRVFF
Trigger: GAAGAAGACTCTTAGACACAATGGAAATGTAACGAT...GTAATCCTGAGGTGTCAATTTTTGCCTCCTCAGTGCAAAGGATTTCAGTGGCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CAA 90 bp CAGGAGTCTTTCATCCAAAGAACAGGGATGAAAAAGTGTGGGTATTTCTCTAATATCCTGCTGACAGACTaGACTGGTACATGGTCCATT +
Preference number: 5 (lower is better)
Translates to: QESFIQRTGMKKCGYFSNILLTD*TGTWSI
Trigger: AATGGACCATGTACCAGTCAAGTCTGTCAGCAGGAT...ATTAGAGAAATACCCACACTTTTTCATCCCTGTTCTTTGGATGAAAGACTCCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS-3UTR CAA 90 bp CAGGAGTCTTTCATCCAAAGAACAGGGATGAAAAAGTGTGGGTATTTCTCTAATTGGGGTGGATTAAAGTaGGGTGTGAAACTGGTGTTT +
Preference number: 5 (lower is better)
Translates to: QESFIQRTGMKKCGYFSNWGGLK*GVKLVF
Trigger: AAACACCAGTTTCACACCCAACTTTAATCCACCCCA...ATTAGAGAAATACCCACACTTTTTCATCCCTGTTCTTTGGATGAAAGACTCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217270.4
ENST00000678254.1
CDS-3UTR CAA 90 bp TCCCTCCAAATAAACTGTTCAATATCACTTCTCCATTCTTATCGTGTGCACAGTTCATGTCTAGTCTCATaGTATGTTACGACTTTGCAG +
Preference number: 5 (lower is better)
Translates to: SLQINCSISLLHSYRVHSSCLVS*YVTTLQ
Trigger: CTGCAAAGTCGTAACATACAATGAGACTAGACATGA...ACTGTGCACACGATAAGAATGGAGAAGTGATATTGAACAGTTTATTTGGAGGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS GCA 72 bp CCAGCTCCCCCACCCCACCGCGTGCTCTCGGGCTGGTaGGTCCAGGGCGCGGGCACCGTAGCTCCGGCCGCG +
Preference number: 6 (lower is better)
Translates to: PAPPPHRVLSGW*VQGAGTVAPAA
Trigger: CGCGGCCGGAGCTACGGTGCCCGCGCCCTGGACGCACCAGCCCGAGAGCACGCGGTGGGGTGGGGGAGCTGG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678254.1
CDS CCA 72 bp TCGCCCCGGCGGGCTCCTCCGGCGTGTCAGGGTCTCTaGGTTCCAGCTGGAGTTGGCGCTCCGGCCCCACAG +
Preference number: 6 (lower is better)
Translates to: SPRRAPPACQGL*VPAGVGAPAPQ
Trigger: CTGTGGGGCCGGAGCGCCAACTCCAGCTGGAACCCAGAGACCCTGACACGCCGGAGGAGCCCGCCGGGGCGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000678059.1
ENST00000678254.1
CDS GCA 72 bp GCGGGCCGCTCGGTTTTCACCTCGAGGACCCGGACTTaGACTTGCAGAGCCGCTGCGTGGGGGATGTCCCTC +
Preference number: 6 (lower is better)
Translates to: AGRSVFTSRTRT*TCRAAAWGMSL
Trigger: GAGGGACATCCCCCACGCAGCGGCTCTGCAAGTGCAAGTCCGGGTCCTCGAGGTGAAAACCGAGCGGCCCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000678059.1
ENST00000678254.1
CDS CCA 72 bp GGCTCCTCCGGCGTGTCAGGGTCTCTGGGTTCCAGCTaGAGTTGGCGCTCCGGCCCCACAGCTCTTTCCAGC +
Preference number: 6 (lower is better)
Translates to: GSSGVSGSLGSS*SWRSGPTALSS
Trigger: GCTGGAAAGAGCTGTGGGGCCGGAGCGCCAACTCCAGCTGGAACCCAGAGACCCTGACACGCCGGAGGAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678059.1
ENST00000678254.1
CDS CAA 72 bp GGCGGGCCGCTCGGTTTTCACCTCGAGGACCCGGACTaGCACTTGCAGAGCCGCTGCGTGGGGGATGTCCCT +
Preference number: 6 (lower is better)
Translates to: GGPLGFHLEDPD*HLQSRCVGDVP
Trigger: AGGGACATCCCCCACGCAGCGGCTCTGCAAGTGCAAGTCCGGGTCCTCGAGGTGAAAACCGAGCGGCCCGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000678059.1
ENST00000678254.1
CDS CCA 72 bp CTGCTCCGGAAGCCGGATCGAGAGTCACAGTGTGGTTaGGCGCAGGCGGGCCGCTCGGTTTTCACCTCGAGG +
Preference number: 6 (lower is better)
Translates to: LLRKPDRESQCG*AQAGRSVFTSR
Trigger: CCTCGAGGTGAAAACCGAGCGGCCCGCCTGCGCCCAACCACACTGTGACTCTCGATCCGGCTTCCGGAGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678059.1
ENST00000678254.1
CDS CCA 72 bp TCTGCTGCTCCGGAAGCCGGATCGAGAGTCACAGTGTaGTTGGGCGCAGGCGGGCCGCTCGGTTTTCACCTC +
Preference number: 6 (lower is better)
Translates to: SAAPEAGSRVTV*LGAGGPLGFHL
Trigger: GAGGTGAAAACCGAGCGGCCCGCCTGCGCCCAACCACACTGTGACTCTCGATCCGGCTTCCGGAGCAGCAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678059.1
ENST00000678254.1
CDS CAA 90 bp GTGGTGGGCACCCCGTTGGTTCTGAGGTCAAGGTCAGCACTGGACTaGCTCCCCCGCTGGGAGGGACGCCAGTGCAGCAGCATCATCTTC +
Preference number: 6 (lower is better)
Translates to: VVGTPLVLRSRSALD*LPRWEGRQCSSIIF
Trigger: GAAGATGATGCTGCTGCACTGGCGTCCCTCCCAGCGGGGGAGCAAGTCCAGTGCTGACCTTGACCTCAGAACCAACGGGGTGCCCACCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS GCA 72 bp GTGATGTCTGTCTCGGCGCCTCCTTTCTGTGCGCTCTaGTGCTCCGGAAGCCGGATCGAGAGTCACAGTGTG +
Preference number: 6 (lower is better)
Translates to: VMSVSAPPFCAL*CSGSRIESHSV
Trigger: CACACTGTGACTCTCGATCCGGCTTCCGGAGCAGCAGAGCGCACAGAAAGGAGGCGCCGAGACAGACATCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678254.1
CDS CCA 72 bp TCTGCTTGGAGCCAGCCCCGACGCATATCTCGAGAGTaGCGGGAGGCAAAGCAGCCGGAATGCCCGAGAAAA +
Preference number: 6 (lower is better)
Translates to: SAWSQPRRISRE*REAKQPECPRK
Trigger: TTTTCTCGGGCATTCCGGCTGCTTTGCCTCCCGCCACTCTCGAGATATGCGTCGGGGCTGGCTCCAAGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217270.4
CDS CAA 72 bp CCGCTCGGTTTTCACCTCGAGGACCCGGACTTGCACTaGCAGAGCCGCTGCGTGGGGGATGTCCCTCTTTTT +
Preference number: 6 (lower is better)
Translates to: PLGFHLEDPDLH*QSRCVGDVPLF
Trigger: AAAAAGAGGGACATCCCCCACGCAGCGGCTCTGCAAGTGCAAGTCCGGGTCCTCGAGGTGAAAACCGAGCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000678059.1
ENST00000678254.1
CDS GCA 72 bp ATGTCTGTCTCGGCGCCTCCTTTCTGTGCGCTCTGCTaGTCCGGAAGCCGGATCGAGAGTCACAGTGTGGTT +
Preference number: 6 (lower is better)
Translates to: MSVSAPPFCALC*SGSRIESHSVV
Trigger: AACCACACTGTGACTCTCGATCCGGCTTCCGGAGCAGCAGAGCGCACAGAAAGGAGGCGCCGAGACAGACAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678254.1
CDS GCA 72 bp ACCATAACTGTCTCGGCGCCTCCTTTCTGTGCGCTCTaGTGCTCCGGAAGCCGGATCGAGAGTCACAGTGTG +
Preference number: 6 (lower is better)
Translates to: TITVSAPPFCAL*CSGSRIESHSV
Trigger: CACACTGTGACTCTCGATCCGGCTTCCGGAGCAGCAGAGCGCACAGAAAGGAGGCGCCGAGACAGTTATGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678059.1
CDS GCA 72 bp ATAACTGTCTCGGCGCCTCCTTTCTGTGCGCTCTGCTaGTCCGGAAGCCGGATCGAGAGTCACAGTGTGGTT +
Preference number: 6 (lower is better)
Translates to: ITVSAPPFCALC*SGSRIESHSVV
Trigger: AACCACACTGTGACTCTCGATCCGGCTTCCGGAGCAGCAGAGCGCACAGAAAGGAGGCGCCGAGACAGTTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678059.1
CDS GCA 72 bp AAAGTTGGGTGTGAAACTGGTGTTTCCATTCTGGGCTaGCATGGTGATGTCTGCTTGGAGCCAGCCCCGACG +
Preference number: 6 (lower is better)
Translates to: KVGCETGVSILG*HGDVCLEPAPT
Trigger: CGTCGGGGCTGGCTCCAAGCAGACATCACCATGGCAGCCCAGAATGGAAACACCAGTTTCACACCCAACTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217270.4
CDS GCA 72 bp GATGCCTGCCAGTGCAATGCCAATGACGATCTTGGCTaGGAAGAAGGTCCGGGTCTTGGTCATGTCCTCATC +
Preference number: 6 (lower is better)
Translates to: DACQCNANDDLG*EEGPGLGHVLI
Trigger: GATGAGGACATGACCAAGACCCGGACCTTCTTCGCAGCCAAGATCGTCATTGGCATTGCACTGGCAGGCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS CAA 72 bp GAGAGGGAGGAGGCATGGTCTTGGGGTGGATTAAAGTaGGGTGTGAAACTGGTGTTTCCATTCTGGGCTGCC +
Preference number: 6 (lower is better)
Translates to: EREEAWSWGGLK*GVKLVFPFWAA
Trigger: GGCAGCCCAGAATGGAAACACCAGTTTCACACCCAACTTTAATCCACCCCAAGACCATGCCTCCTCCCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217270.4
ENST00000678254.1
CDS CAA 72 bp CCAATGACGATCTTGGCTGCGAAGAAGGTCCGGGTCTaGGTCATGTCCTCATCCTCATCCATAGGGAGGTCA +
Preference number: 6 (lower is better)
Translates to: PMTILAAKKVRV*VMSSSSSIGRS
Trigger: TGACCTCCCTATGGATGAGGATGAGGACATGACCAAGACCCGGACCTTCTTCGCAGCCAAGATCGTCATTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS GCA 72 bp AAAGTTGGGTGTGAAACTGGTGTTTCCATTCTGGGCTaGCATGGTGATGTCTGTCTCGGCGCCTCCTTTCTG +
Preference number: 6 (lower is better)
Translates to: KVGCETGVSILG*HGDVCLGASFL
Trigger: CAGAAAGGAGGCGCCGAGACAGACATCACCATGGCAGCCCAGAATGGAAACACCAGTTTCACACCCAACTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678254.1
CDS CCA 72 bp GGATTAAAGTTGGGTGTGAAACTGGTGTTTCCATTCTaGGCTGCCATGGTGATGTCTGCTTGGAGCCAGCCC +
Preference number: 6 (lower is better)
Translates to: GLKLGVKLVFPF*AAMVMSAWSQP
Trigger: GGGCTGGCTCCAAGCAGACATCACCATGGCAGCCCAGAATGGAAACACCAGTTTCACACCCAACTTTAATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000217270.4
CDS CCA 72 bp GGATTAAAGTTGGGTGTGAAACTGGTGTTTCCATTCTaGGCTGCCATGGTGATGTCTGTCTCGGCGCCTCCT +
Preference number: 6 (lower is better)
Translates to: GLKLGVKLVFPF*AAMVMSVSAPP
Trigger: AGGAGGCGCCGAGACAGACATCACCATGGCAGCCCAGAATGGAAACACCAGTTTCACACCCAACTTTAATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678254.1
CDS TCA 72 bp CCGTTTCTGTTGCAAAGTAAGCCGATGGGATGGCAATaGGAATGGACACCATCCAGACCAAGGCGATCAGGA +
Preference number: 6 (lower is better)
Translates to: PFLLQSKPMGWQ*EWTPSRPRRSG
Trigger: TCCTGATCGCCTTGGTCTGGATGGTGTCCATTCTCATTGCCATCCCATCGGCTTACTTTGCAACAGAAACGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000217270.4
ENST00000678059.1
ENST00000678254.1
CDS CAA 90 bp AAGTTAAAGGAGAGGGAGGAGGCATGGTCTTGGGGTGGATTAAAGTaGGGTGTGAAACTGGTGTTTCCATTCTGGGCTGCCATGGTGATG +
Preference number: 6 (lower is better)
Translates to: KLKEREEAWSWGGLK*GVKLVFPFWAAMVM
Trigger: CATCACCATGGCAGCCCAGAATGGAAACACCAGTTTCACACCCAACTTTAATCCACCCCAAGACCATGCCTCCTCCCTCTCCTTTAACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217270.4
ENST00000678254.1
CDS CAA 90 bp ATAATCACCATAACTGAAGTTAAAGGAGAGGGAGGAGGCATGGTCTaGGGGTGGATTAAAGTTGGGTGTGAAACTGGTGTTTCCATTCTG +
Preference number: 6 (lower is better)
Translates to: IITITEVKGEGGGMV*GWIKVGCETGVSIL
Trigger: CAGAATGGAAACACCAGTTTCACACCCAACTTTAATCCACCCCAAGACCATGCCTCCTCCCTCTCCTTTAACTTCAGTTATGGTGATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217270.4
ENST00000678254.1