RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PRL (Homo sapiens)

Ensembl gene IDs: ENSG00000172179

Ensembl transcript IDs: ENST00000306482.2, ENST00000615510.4, ENST00000617911.4, ENST00000651245.1, ENST00000651757.1

Found 126 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR CCA 90 bp TTGCAATGGAACGGATCATTAAGGACCTTCTCAGAAATAGATGAAATGGATGTGCCCCGCCGGGACAGATaGGCAAGGGGGCCACGCTCT +
Preference number: 4 (lower is better)
Translates to: LQWNGSLRTFSEIDEMDVPRRDR*ARGPRS
Trigger: AGAGCGTGGCCCCCTTGCCCATCTGTCCCGGCGGGG...CACATCCATTTCATCTATTTCTGAGAAGGTCCTTAATGATCCGTTCCATTGCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000306482.2
ENST00000617911.4
ENST00000651757.1
CDS-3UTR CCA 90 bp AAAAGAGATACAACTAAAAGAAGCTTGCAATGGAACGGATCATTAAGGACCTTCCCCCGCCGGGACAGATaGGCAAGGGGGCCACGCTCT +
Preference number: 4 (lower is better)
Translates to: KRDTTKRSLQWNGSLRTFPRRDR*ARGPRS
Trigger: AGAGCGTGGCCCCCTTGCCCATCTGTCCCGGCGGGG...GAAGGTCCTTAATGATCCGTTCCATTGCAAGCTTCTTTTAGTTGTATCTCTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000306482.2
ENST00000617911.4
ENST00000651757.1
CDS-3UTR CCA 90 bp GATACAACTAAAAGAAGCTTGCAATGGAACGGATCATTAAGGACCTTCTCAGAATCTCGAAGGGTCACCTaGCATCGGGCAGCCCCGCCG +
Preference number: 4 (lower is better)
Translates to: DTTKRSLQWNGSLRTFSESRRVT*HRAAPP
Trigger: CGGCGGGGCTGCCCGATGCCAGGTGACCCTTCGAGA...TTCTGAGAAGGTCCTTAATGATCCGTTCCATTGCAAGCTTCTTTTAGTTGTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306482.2
ENST00000617911.4
ENST00000651757.1
CDS-3UTR CCA 90 bp AAAAGAGATACAACTAAAAGAAGCTTGCAATGGAACGGATCATTAAGGACCTTCTCTCGAAGGGTCACCTaGCATCGGGCAGCCCCGCCG +
Preference number: 4 (lower is better)
Translates to: KRDTTKRSLQWNGSLRTFSRRVT*HRAAPP
Trigger: CGGCGGGGCTGCCCGATGCCAGGTGACCCTTCGAGA...GAAGGTCCTTAATGATCCGTTCCATTGCAAGCTTCTTTTAGTTGTATCTCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000306482.2
ENST00000617911.4
ENST00000651757.1
CDS-3UTR GCA 90 bp GATACAACTAAAAGAAGCTTGCAATGGAACGGATCATTAAGGACCTTCTCAGAAGCCTCCGGGGCTTCTTaGATACCACGTACTTCCGTG +
Preference number: 4 (lower is better)
Translates to: DTTKRSLQWNGSLRTFSEASGAS*IPRTSV
Trigger: CACGGAAGTACGTGGTATGCAAGAAGCCCCGGAGGC...TTCTGAGAAGGTCCTTAATGATCCGTTCCATTGCAAGCTTCTTTTAGTTGTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306482.2
ENST00000615510.4
ENST00000617911.4
CDS-3UTR CCA 90 bp AAAAGAGATACAACTAAAAGAAGCTTGCAATGGAACGGATCATTAAGGACCTTCAAGGGGGCCACGCTCTaGCACAGGAGCAGGTTTGAC +
Preference number: 4 (lower is better)
Translates to: KRDTTKRSLQWNGSLRTFKGATL*HRSRFD
Trigger: GTCAAACCTGCTCCTGTGCCAGAGCGTGGCCCCCTT...GAAGGTCCTTAATGATCCGTTCCATTGCAAGCTTCTTTTAGTTGTATCTCTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000306482.2
ENST00000617911.4
ENST00000651757.1
CDS-3UTR CCA 90 bp GATACAACTAAAAGAAGCTTGCAATGGAACGGATCATTAAGGACCTTCTCAGAACCTTGTCTTCGGGGGTaGCAAGGGAAGAAGTGTGGC +
Preference number: 4 (lower is better)
Translates to: DTTKRSLQWNGSLRTFSEPCLRG*QGKKCG
Trigger: GCCACACTTCTTCCCTTGCCACCCCCGAAGACAAGG...TTCTGAGAAGGTCCTTAATGATCCGTTCCATTGCAAGCTTCTTTTAGTTGTATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306482.2
ENST00000615510.4
ENST00000617911.4
ENST00000651757.1
CDS-3UTR CCA 90 bp TTGCAATGGAACGGATCATTAAGGACCTTCTCAGAAATAGATGAAATGGATGTGCCTTGTCTTCGGGGGTaGCAAGGGAAGAAGTGTGGC +
Preference number: 4 (lower is better)
Translates to: LQWNGSLRTFSEIDEMDVPCLRG*QGKKCG
Trigger: GCCACACTTCTTCCCTTGCCACCCCCGAAGACAAGG...CACATCCATTTCATCTATTTCTGAGAAGGTCCTTAATGATCCGTTCCATTGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306482.2
ENST00000615510.4
ENST00000617911.4
ENST00000651757.1
CDS-3UTR CCA 90 bp GATACAACTAAAAGAAGCTTGCAATGGAACGGATCATTAAGGACCTTCTCAGAAAGCCATCTGCAGGGATaGAAGTCCCGACCAGACAGG +
Preference number: 4 (lower is better)
Translates to: DTTKRSLQWNGSLRTFSESHLQG*KSRPDR
Trigger: CCTGTCTGGTCGGGACTTCCATCCCTGCAGATGGCT...TTCTGAGAAGGTCCTTAATGATCCGTTCCATTGCAAGCTTCTTTTAGTTGTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306482.2
ENST00000615510.4
ENST00000617911.4
ENST00000651757.1
CDS-3UTR TCA 90 bp TTGCAATGGAACGGATCATTAAGGACCTTCTCAGAAATAGATGAAATGGATGTGCAGGATGAACCTGGCTaGCTATCAGCTCCATGCCCT +
Preference number: 4 (lower is better)
Translates to: LQWNGSLRTFSEIDEMDVQDEPG*LSAPCP
Trigger: AGGGCATGGAGCTGATAGTCAGCCAGGTTCATCCTG...CACATCCATTTCATCTATTTCTGAGAAGGTCCTTAATGATCCGTTCCATTGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306482.2
ENST00000615510.4
ENST00000617911.4
CDS-3UTR GCA 90 bp AAAAGAGATACAACTAAAAGAAGCTTGCAATGGAACGGATCATTAAGGACCTTCGCCTCCGGGGCTTCTTaGATACCACGTACTTCCGTG +
Preference number: 4 (lower is better)
Translates to: KRDTTKRSLQWNGSLRTFASGAS*IPRTSV
Trigger: CACGGAAGTACGTGGTATGCAAGAAGCCCCGGAGGC...GAAGGTCCTTAATGATCCGTTCCATTGCAAGCTTCTTTTAGTTGTATCTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000306482.2
ENST00000615510.4
ENST00000617911.4
CDS-3UTR CCA 90 bp AAAAGAGATACAACTAAAAGAAGCTTGCAATGGAACGGATCATTAAGGACCTTCCCTTGTCTTCGGGGGTaGCAAGGGAAGAAGTGTGGC +
Preference number: 4 (lower is better)
Translates to: KRDTTKRSLQWNGSLRTFPCLRG*QGKKCG
Trigger: GCCACACTTCTTCCCTTGCCACCCCCGAAGACAAGG...GAAGGTCCTTAATGATCCGTTCCATTGCAAGCTTCTTTTAGTTGTATCTCTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306482.2
ENST00000615510.4
ENST00000617911.4
ENST00000651757.1
CDS-3UTR CCA 90 bp AAAAGAGATACAACTAAAAGAAGCTTGCAATGGAACGGATCATTAAGGACCTTCAGCCATCTGCAGGGATaGAAGTCCCGACCAGACAGG +
Preference number: 4 (lower is better)
Translates to: KRDTTKRSLQWNGSLRTFSHLQG*KSRPDR
Trigger: CCTGTCTGGTCGGGACTTCCATCCCTGCAGATGGCT...GAAGGTCCTTAATGATCCGTTCCATTGCAAGCTTCTTTTAGTTGTATCTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306482.2
ENST00000615510.4
ENST00000617911.4
ENST00000651757.1
CDS-3UTR TCA 90 bp AAAAGAGATACAACTAAAAGAAGCTTGCAATGGAACGGATCATTAAGGACCTTCCAGGATGAACCTGGCTaGCTATCAGCTCCATGCCCT +
Preference number: 4 (lower is better)
Translates to: KRDTTKRSLQWNGSLRTFQDEPG*LSAPCP
Trigger: AGGGCATGGAGCTGATAGTCAGCCAGGTTCATCCTG...GAAGGTCCTTAATGATCCGTTCCATTGCAAGCTTCTTTTAGTTGTATCTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306482.2
ENST00000615510.4
ENST00000617911.4
CDS-3UTR GCA 90 bp GATACAACTAAAAGAAGCTTGCAATGGAACGGATCATTAAGGACCTTCTCAGAATTCATCTGTTGGGCTTaGTCCTTGTCTTCGGGGGTG +
Preference number: 4 (lower is better)
Translates to: DTTKRSLQWNGSLRTFSEFICWA*SLSSGV
Trigger: CACCCCCGAAGACAAGGAGCAAGCCCAACAGATGAA...TTCTGAGAAGGTCCTTAATGATCCGTTCCATTGCAAGCTTCTTTTAGTTGTATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306482.2
ENST00000615510.4
ENST00000617911.4
ENST00000651757.1
CDS-3UTR GCA 90 bp GATACAACTAAAAGAAGCTTGCAATGGAACGGATCATTAAGGACCTTCTCAGAATCTTCATCAGCCATCTaGAGGGATGGAAGTCCCGAC +
Preference number: 4 (lower is better)
Translates to: DTTKRSLQWNGSLRTFSESSSAI*RDGSPD
Trigger: GTCGGGACTTCCATCCCTGCAGATGGCTGATGAAGA...TTCTGAGAAGGTCCTTAATGATCCGTTCCATTGCAAGCTTCTTTTAGTTGTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306482.2
ENST00000615510.4
ENST00000617911.4
ENST00000651757.1
CDS-3UTR GCA 90 bp TTGCAATGGAACGGATCATTAAGGACCTTCTCAGAAATAGATGAAATGGATGTGTCTTCATCAGCCATCTaGAGGGATGGAAGTCCCGAC +
Preference number: 4 (lower is better)
Translates to: LQWNGSLRTFSEIDEMDVSSSAI*RDGSPD
Trigger: GTCGGGACTTCCATCCCTGCAGATGGCTGATGAAGA...CACATCCATTTCATCTATTTCTGAGAAGGTCCTTAATGATCCGTTCCATTGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306482.2
ENST00000615510.4
ENST00000617911.4
ENST00000651757.1
CDS-3UTR CCA 90 bp TTGCAATGGAACGGATCATTAAGGACCTTCTCAGAAATAGATGAAATGGATGTGGCAAGGGAAGAAGTGTaGCAGCTGTTGATGGCCTTG +
Preference number: 4 (lower is better)
Translates to: LQWNGSLRTFSEIDEMDVAREEV*QLLMAL
Trigger: CAAGGCCATCAACAGCTGCCACACTTCTTCCCTTGC...CACATCCATTTCATCTATTTCTGAGAAGGTCCTTAATGATCCGTTCCATTGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306482.2
ENST00000615510.4
ENST00000617911.4
ENST00000651757.1
CDS-3UTR CCA 90 bp GATACAACTAAAAGAAGCTTGCAATGGAACGGATCATTAAGGACCTTCTCAGAAGCAAGGGAAGAAGTGTaGCAGCTGTTGATGGCCTTG +
Preference number: 4 (lower is better)
Translates to: DTTKRSLQWNGSLRTFSEAREEV*QLLMAL
Trigger: CAAGGCCATCAACAGCTGCCACACTTCTTCCCTTGC...TTCTGAGAAGGTCCTTAATGATCCGTTCCATTGCAAGCTTCTTTTAGTTGTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306482.2
ENST00000615510.4
ENST00000617911.4
ENST00000651757.1
CDS-3UTR TCA 90 bp GATACAACTAAAAGAAGCTTGCAATGGAACGGATCATTAAGGACCTTCTCAGAAACTTCCGTGACCAGATaGTACAGAGGCTCATTCCAG +
Preference number: 4 (lower is better)
Translates to: DTTKRSLQWNGSLRTFSETSVTR*YRGSFQ
Trigger: CTGGAATGAGCCTCTGTATCATCTGGTCACGGAAGT...TTCTGAGAAGGTCCTTAATGATCCGTTCCATTGCAAGCTTCTTTTAGTTGTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306482.2
ENST00000615510.4
ENST00000617911.4
CDS-3UTR TCA 90 bp GATACAACTAAAAGAAGCTTGCAATGGAACGGATCATTAAGGACCTTCTCAGAATACCACGTACTTCCGTaGCCAGATGATACAGAGGCT +
Preference number: 4 (lower is better)
Translates to: DTTKRSLQWNGSLRTFSEYHVLP*PDDTEA
Trigger: AGCCTCTGTATCATCTGGTCACGGAAGTACGTGGTA...TTCTGAGAAGGTCCTTAATGATCCGTTCCATTGCAAGCTTCTTTTAGTTGTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306482.2
ENST00000615510.4
ENST00000617911.4
CDS-3UTR TCA 90 bp TTGCAATGGAACGGATCATTAAGGACCTTCTCAGAAATAGATGAAATGGATGTGTACCACGTACTTCCGTaGCCAGATGATACAGAGGCT +
Preference number: 4 (lower is better)
Translates to: LQWNGSLRTFSEIDEMDVYHVLP*PDDTEA
Trigger: AGCCTCTGTATCATCTGGTCACGGAAGTACGTGGTA...CACATCCATTTCATCTATTTCTGAGAAGGTCCTTAATGATCCGTTCCATTGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306482.2
ENST00000615510.4
ENST00000617911.4
CDS-3UTR GCA 90 bp AAAAGAGATACAACTAAAAGAAGCTTGCAATGGAACGGATCATTAAGGACCTTCTTCATCTGTTGGGCTTaGTCCTTGTCTTCGGGGGTG +
Preference number: 4 (lower is better)
Translates to: KRDTTKRSLQWNGSLRTFFICWA*SLSSGV
Trigger: CACCCCCGAAGACAAGGAGCAAGCCCAACAGATGAA...GAAGGTCCTTAATGATCCGTTCCATTGCAAGCTTCTTTTAGTTGTATCTCTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306482.2
ENST00000615510.4
ENST00000617911.4
ENST00000651757.1
CDS-3UTR GCA 90 bp AAAAGAGATACAACTAAAAGAAGCTTGCAATGGAACGGATCATTAAGGACCTTCTCTTCATCAGCCATCTaGAGGGATGGAAGTCCCGAC +
Preference number: 4 (lower is better)
Translates to: KRDTTKRSLQWNGSLRTFSSSAI*RDGSPD
Trigger: GTCGGGACTTCCATCCCTGCAGATGGCTGATGAAGA...GAAGGTCCTTAATGATCCGTTCCATTGCAAGCTTCTTTTAGTTGTATCTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306482.2
ENST00000615510.4
ENST00000617911.4
ENST00000651757.1
CDS-3UTR TCA 90 bp AAAAGAGATACAACTAAAAGAAGCTTGCAATGGAACGGATCATTAAGGACCTTCACTTCCGTGACCAGATaGTACAGAGGCTCATTCCAG +
Preference number: 4 (lower is better)
Translates to: KRDTTKRSLQWNGSLRTFTSVTR*YRGSFQ
Trigger: CTGGAATGAGCCTCTGTATCATCTGGTCACGGAAGT...GAAGGTCCTTAATGATCCGTTCCATTGCAAGCTTCTTTTAGTTGTATCTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306482.2
ENST00000615510.4
ENST00000617911.4
CDS-3UTR TCA 90 bp TTGCAATGGAACGGATCATTAAGGACCTTCTCAGAAATAGATGAAATGGATGTGTCTTTGGTTTCAGGATaGACCTGGCTGACTATCAGC +
Preference number: 4 (lower is better)
Translates to: LQWNGSLRTFSEIDEMDVSLVSG*TWLTIS
Trigger: GCTGATAGTCAGCCAGGTTCATCCTGAAACCAAAGA...CACATCCATTTCATCTATTTCTGAGAAGGTCCTTAATGATCCGTTCCATTGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306482.2
ENST00000615510.4
ENST00000617911.4
CDS-3UTR TCA 90 bp GATACAACTAAAAGAAGCTTGCAATGGAACGGATCATTAAGGACCTTCTCAGAATCTTTGGTTTCAGGATaGACCTGGCTGACTATCAGC +
Preference number: 4 (lower is better)
Translates to: DTTKRSLQWNGSLRTFSESLVSG*TWLTIS
Trigger: GCTGATAGTCAGCCAGGTTCATCCTGAAACCAAAGA...TTCTGAGAAGGTCCTTAATGATCCGTTCCATTGCAAGCTTCTTTTAGTTGTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306482.2
ENST00000615510.4
ENST00000617911.4
CDS-3UTR TCA 90 bp GATACAACTAAAAGAAGCTTGCAATGGAACGGATCATTAAGGACCTTCTCAGAAAGTTGTTGTTGTGGATaGTTCGGCACTTCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: DTTKRSLQWNGSLRTFSESCCCG*FGTSGA
Trigger: AGCTCCTGAAGTGCCGAATCATCCACAACAACAACT...TTCTGAGAAGGTCCTTAATGATCCGTTCCATTGCAAGCTTCTTTTAGTTGTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306482.2
ENST00000615510.4
ENST00000617911.4
ENST00000651757.1
CDS-3UTR TCA 90 bp TTGCAATGGAACGGATCATTAAGGACCTTCTCAGAAATAGATGAAATGGATGTGAGTTGTTGTTGTGGATaGTTCGGCACTTCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: LQWNGSLRTFSEIDEMDVSCCCG*FGTSGA
Trigger: AGCTCCTGAAGTGCCGAATCATCCACAACAACAACT...CACATCCATTTCATCTATTTCTGAGAAGGTCCTTAATGATCCGTTCCATTGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306482.2
ENST00000615510.4
ENST00000617911.4
ENST00000651757.1
CDS-3UTR GCA 90 bp TTGCAATGGAACGGATCATTAAGGACCTTCTCAGAAATAGATGAAATGGATGTGTTTTATGTGAATCCCTaGGTAGGCAGTGGAGCAGGT +
Preference number: 4 (lower is better)
Translates to: LQWNGSLRTFSEIDEMDVFYVNP*VGSGAG
Trigger: ACCTGCTCCACTGCCTACGCAGGGATTCACATAAAA...CACATCCATTTCATCTATTTCTGAGAAGGTCCTTAATGATCCGTTCCATTGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306482.2
ENST00000615510.4
ENST00000617911.4
ENST00000651757.1
CDS-3UTR CCA 90 bp GATACAACTAAAAGAAGCTTGCAATGGAACGGATCATTAAGGACCTTCTCAGAAGAGGGACCCTTTCCATaGCGATCCTTTGATGTTCAT +
Preference number: 4 (lower is better)
Translates to: DTTKRSLQWNGSLRTFSEEGPFP*RSFDVH
Trigger: ATGAACATCAAAGGATCGCCATGGAAAGGGTCCCTC...TTCTGAGAAGGTCCTTAATGATCCGTTCCATTGCAAGCTTCTTTTAGTTGTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306482.2
ENST00000615510.4
ENST00000651757.1
CDS-3UTR CCA 90 bp TTGCAATGGAACGGATCATTAAGGACCTTCTCAGAAATAGATGAAATGGATGTGATGAACCCCCGGCCATaGGTATACCGTTTATCGAAT +
Preference number: 4 (lower is better)
Translates to: LQWNGSLRTFSEIDEMDVMNPRP*VYRLSN
Trigger: ATTCGATAAACGGTATACCCATGGCCGGGGGTTCAT...CACATCCATTTCATCTATTTCTGAGAAGGTCCTTAATGATCCGTTCCATTGCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306482.2
ENST00000615510.4
ENST00000617911.4
ENST00000651757.1
CDS-3UTR CCA 90 bp GATACAACTAAAAGAAGCTTGCAATGGAACGGATCATTAAGGACCTTCTCAGAAATGAACCCCCGGCCATaGGTATACCGTTTATCGAAT +
Preference number: 4 (lower is better)
Translates to: DTTKRSLQWNGSLRTFSEMNPRP*VYRLSN
Trigger: ATTCGATAAACGGTATACCCATGGCCGGGGGTTCAT...TTCTGAGAAGGTCCTTAATGATCCGTTCCATTGCAAGCTTCTTTTAGTTGTATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306482.2
ENST00000615510.4
ENST00000617911.4
ENST00000651757.1
CDS-3UTR CCA 90 bp TTGCAATGGAACGGATCATTAAGGACCTTCTCAGAAATAGATGAAATGGATGTGGGACCCTGCTTTCCATaGCGATCCTTTGATGTTCAT +
Preference number: 4 (lower is better)
Translates to: LQWNGSLRTFSEIDEMDVGPCFP*RSFDVH
Trigger: ATGAACATCAAAGGATCGCCATGGAAAGCAGGGTCC...CACATCCATTTCATCTATTTCTGAGAAGGTCCTTAATGATCCGTTCCATTGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617911.4
CDS-3UTR TCA 90 bp GATACAACTAAAAGAAGCTTGCAATGGAACGGATCATTAAGGACCTTCTCAGAAAGGATCGCAATATGCTaGCTATCAGGCTCAGAAAGT +
Preference number: 4 (lower is better)
Translates to: DTTKRSLQWNGSLRTFSERIAIC*LSGSES
Trigger: ACTTTCTGAGCCTGATAGTCAGCATATTGCGATCCT...TTCTGAGAAGGTCCTTAATGATCCGTTCCATTGCAAGCTTCTTTTAGTTGTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306482.2
ENST00000615510.4
ENST00000617911.4
CDS-3UTR TCA 90 bp AAAAGAGATACAACTAAAAGAAGCTTGCAATGGAACGGATCATTAAGGACCTTCAGTTGTTGTTGTGGATaGTTCGGCACTTCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: KRDTTKRSLQWNGSLRTFSCCCG*FGTSGA
Trigger: AGCTCCTGAAGTGCCGAATCATCCACAACAACAACT...GAAGGTCCTTAATGATCCGTTCCATTGCAAGCTTCTTTTAGTTGTATCTCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306482.2
ENST00000615510.4
ENST00000617911.4
ENST00000651757.1
CDS-3UTR GCA 90 bp TTGCAATGGAACGGATCATTAAGGACCTTCTCAGAAATAGATGAAATGGATGTGCATGTTCGTGATCGTTaGAGGAAACACACTTCACCA +
Preference number: 4 (lower is better)
Translates to: LQWNGSLRTFSEIDEMDVHVRDR*RKHTSP
Trigger: TGGTGAAGTGTGTTTCCTGCAACGATCACGAACATG...CACATCCATTTCATCTATTTCTGAGAAGGTCCTTAATGATCCGTTCCATTGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306482.2
ENST00000615510.4
ENST00000617911.4
ENST00000651757.1
CDS-3UTR GCA 90 bp GATACAACTAAAAGAAGCTTGCAATGGAACGGATCATTAAGGACCTTCTCAGAACATGTTCGTGATCGTTaGAGGAAACACACTTCACCA +
Preference number: 4 (lower is better)
Translates to: DTTKRSLQWNGSLRTFSEHVRDR*RKHTSP
Trigger: TGGTGAAGTGTGTTTCCTGCAACGATCACGAACATG...TTCTGAGAAGGTCCTTAATGATCCGTTCCATTGCAAGCTTCTTTTAGTTGTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306482.2
ENST00000615510.4
ENST00000617911.4
ENST00000651757.1
CDS-3UTR GCA 90 bp GATACAACTAAAAGAAGCTTGCAATGGAACGGATCATTAAGGACCTTCTCAGAAAGAAGCCGTTTGGTTTaGTCCTCAATCTCTACAGCT +
Preference number: 4 (lower is better)
Translates to: DTTKRSLQWNGSLRTFSERSRLV*SSISTA
Trigger: AGCTGTAGAGATTGAGGAGCAAACCAAACGGCTTCT...TTCTGAGAAGGTCCTTAATGATCCGTTCCATTGCAAGCTTCTTTTAGTTGTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306482.2
ENST00000615510.4
ENST00000617911.4
CDS-3UTR CCA 90 bp AAAAGAGATACAACTAAAAGAAGCTTGCAATGGAACGGATCATTAAGGACCTTCGAGGGACCCTTTCCATaGCGATCCTTTGATGTTCAT +
Preference number: 4 (lower is better)
Translates to: KRDTTKRSLQWNGSLRTFEGPFP*RSFDVH
Trigger: ATGAACATCAAAGGATCGCCATGGAAAGGGTCCCTC...GAAGGTCCTTAATGATCCGTTCCATTGCAAGCTTCTTTTAGTTGTATCTCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306482.2
ENST00000615510.4
ENST00000651757.1
CDS-3UTR CCA 90 bp AAAAGAGATACAACTAAAAGAAGCTTGCAATGGAACGGATCATTAAGGACCTTCATGAACCCCCGGCCATaGGTATACCGTTTATCGAAT +
Preference number: 4 (lower is better)
Translates to: KRDTTKRSLQWNGSLRTFMNPRP*VYRLSN
Trigger: ATTCGATAAACGGTATACCCATGGCCGGGGGTTCAT...GAAGGTCCTTAATGATCCGTTCCATTGCAAGCTTCTTTTAGTTGTATCTCTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306482.2
ENST00000615510.4
ENST00000617911.4
ENST00000651757.1
CDS-3UTR CCA 90 bp TTGCAATGGAACGGATCATTAAGGACCTTCTCAGAAATAGATGAAATGGATGTGCCTCTAGAAGCCGTTTaGTTTGCTCCTCAATCTCTA +
Preference number: 4 (lower is better)
Translates to: LQWNGSLRTFSEIDEMDVPLEAV*FAPQSL
Trigger: TAGAGATTGAGGAGCAAACCAAACGGCTTCTAGAGG...CACATCCATTTCATCTATTTCTGAGAAGGTCCTTAATGATCCGTTCCATTGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306482.2
ENST00000615510.4
ENST00000617911.4
CDS-3UTR CCA 90 bp GATACAACTAAAAGAAGCTTGCAATGGAACGGATCATTAAGGACCTTCTCAGAACCTCTAGAAGCCGTTTaGTTTGCTCCTCAATCTCTA +
Preference number: 4 (lower is better)
Translates to: DTTKRSLQWNGSLRTFSEPLEAV*FAPQSL
Trigger: TAGAGATTGAGGAGCAAACCAAACGGCTTCTAGAGG...TTCTGAGAAGGTCCTTAATGATCCGTTCCATTGCAAGCTTCTTTTAGTTGTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306482.2
ENST00000615510.4
ENST00000617911.4
CDS-3UTR CCA 90 bp GATACAACTAAAAGAAGCTTGCAATGGAACGGATCATTAAGGACCTTCTCAGAATCACCAGAGAAGATCTaGAAGTCTCACGGTTTTCTC +
Preference number: 4 (lower is better)
Translates to: DTTKRSLQWNGSLRTFSESPEKI*KSHGFL
Trigger: GAGAAAACCGTGAGACTTCCAGATCTTCTCTGGTGA...TTCTGAGAAGGTCCTTAATGATCCGTTCCATTGCAAGCTTCTTTTAGTTGTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000615510.4
ENST00000617911.4
ENST00000651757.1
CDS-3UTR CCA 90 bp TTGCAATGGAACGGATCATTAAGGACCTTCTCAGAAATAGATGAAATGGATGTGTCACCAGAGAAGATCTaGAAGTCTCACGGTTTTCTC +
Preference number: 4 (lower is better)
Translates to: LQWNGSLRTFSEIDEMDVSPEKI*KSHGFL
Trigger: GAGAAAACCGTGAGACTTCCAGATCTTCTCTGGTGA...CACATCCATTTCATCTATTTCTGAGAAGGTCCTTAATGATCCGTTCCATTGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000615510.4
ENST00000617911.4
ENST00000651757.1
CDS-3UTR TCA 90 bp GATACAACTAAAAGAAGCTTGCAATGGAACGGATCATTAAGGACCTTCTCAGAATTCGCTGAACATTTCTaGGGAGAGGTTATGGATGTA +
Preference number: 4 (lower is better)
Translates to: DTTKRSLQWNGSLRTFSEFAEHF*GEVMDV
Trigger: TACATCCATAACCTCTCCTCAGAAATGTTCAGCGAA...TTCTGAGAAGGTCCTTAATGATCCGTTCCATTGCAAGCTTCTTTTAGTTGTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306482.2
ENST00000615510.4
ENST00000617911.4
ENST00000651757.1
CDS-3UTR TCA 90 bp TTGCAATGGAACGGATCATTAAGGACCTTCTCAGAAATAGATGAAATGGATGTGTTCGCTGAACATTTCTaGGGAGAGGTTATGGATGTA +
Preference number: 4 (lower is better)
Translates to: LQWNGSLRTFSEIDEMDVFAEHF*GEVMDV
Trigger: TACATCCATAACCTCTCCTCAGAAATGTTCAGCGAA...CACATCCATTTCATCTATTTCTGAGAAGGTCCTTAATGATCCGTTCCATTGCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306482.2
ENST00000615510.4
ENST00000617911.4
ENST00000651757.1
CDS-3UTR TCA 90 bp GATACAACTAAAAGAAGCTTGCAATGGAACGGATCATTAAGGACCTTCTCAGAAGTTTATCGAATTCGCTaGACATTTCTGAGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: DTTKRSLQWNGSLRTFSEVYRIR*TFLRRG
Trigger: ACCTCTCCTCAGAAATGTTCAGCGAATTCGATAAAC...TTCTGAGAAGGTCCTTAATGATCCGTTCCATTGCAAGCTTCTTTTAGTTGTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306482.2
ENST00000615510.4
ENST00000617911.4
ENST00000651757.1
CDS-3UTR TCA 90 bp TTGCAATGGAACGGATCATTAAGGACCTTCTCAGAAATAGATGAAATGGATGTGGTTTATCGAATTCGCTaGACATTTCTGAGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: LQWNGSLRTFSEIDEMDVVYRIR*TFLRRG
Trigger: ACCTCTCCTCAGAAATGTTCAGCGAATTCGATAAAC...CACATCCATTTCATCTATTTCTGAGAAGGTCCTTAATGATCCGTTCCATTGCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306482.2
ENST00000615510.4
ENST00000617911.4
ENST00000651757.1
CDS-3UTR TCA 90 bp GATACAACTAAAAGAAGCTTGCAATGGAACGGATCATTAAGGACCTTCTCAGAACTCAGAAAGTCTTTTTaGTTCATCTGTTGGGCTTGC +
Preference number: 4 (lower is better)
Translates to: DTTKRSLQWNGSLRTFSELRKSF*FICWAC
Trigger: GCAAGCCCAACAGATGAATCAAAAAGACTTTCTGAG...TTCTGAGAAGGTCCTTAATGATCCGTTCCATTGCAAGCTTCTTTTAGTTGTATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000306482.2
ENST00000615510.4
ENST00000617911.4
CDS-3UTR TCA 90 bp AAAAGAGATACAACTAAAAGAAGCTTGCAATGGAACGGATCATTAAGGACCTTCAGGATCGCAATATGCTaGCTATCAGGCTCAGAAAGT +
Preference number: 4 (lower is better)
Translates to: KRDTTKRSLQWNGSLRTFRIAIC*LSGSES
Trigger: ACTTTCTGAGCCTGATAGTCAGCATATTGCGATCCT...GAAGGTCCTTAATGATCCGTTCCATTGCAAGCTTCTTTTAGTTGTATCTCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306482.2
ENST00000615510.4
ENST00000617911.4
CDS-3UTR TCA 90 bp TTGCAATGGAACGGATCATTAAGGACCTTCTCAGAAATAGATGAAATGGATGTGCTTCTCAGAAATAGATaGAATGGATGTGGGCTTAGC +
Preference number: 4 (lower is better)
Translates to: LQWNGSLRTFSEIDEMDVLLRNR*NGCGLS
Trigger: GCTAAGCCCACATCCATTTCATCTATTTCTGAGAAG...CACATCCATTTCATCTATTTCTGAGAAGGTCCTTAATGATCCGTTCCATTGCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306482.2
ENST00000615510.4
ENST00000617911.4
ENST00000651757.1
CDS-3UTR GCA 90 bp AAAAGAGATACAACTAAAAGAAGCTTGCAATGGAACGGATCATTAAGGACCTTCCATGTTCGTGATCGTTaGAGGAAACACACTTCACCA +
Preference number: 4 (lower is better)
Translates to: KRDTTKRSLQWNGSLRTFHVRDR*RKHTSP
Trigger: TGGTGAAGTGTGTTTCCTGCAACGATCACGAACATG...GAAGGTCCTTAATGATCCGTTCCATTGCAAGCTTCTTTTAGTTGTATCTCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306482.2
ENST00000615510.4
ENST00000617911.4
ENST00000651757.1
CDS-3UTR GCA 90 bp AAAAGAGATACAACTAAAAGAAGCTTGCAATGGAACGGATCATTAAGGACCTTCAGAAGCCGTTTGGTTTaGTCCTCAATCTCTACAGCT +
Preference number: 4 (lower is better)
Translates to: KRDTTKRSLQWNGSLRTFRSRLV*SSISTA
Trigger: AGCTGTAGAGATTGAGGAGCAAACCAAACGGCTTCT...GAAGGTCCTTAATGATCCGTTCCATTGCAAGCTTCTTTTAGTTGTATCTCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306482.2
ENST00000615510.4
ENST00000617911.4
CDS-3UTR CCA 90 bp AAAAGAGATACAACTAAAAGAAGCTTGCAATGGAACGGATCATTAAGGACCTTCCCTCTAGAAGCCGTTTaGTTTGCTCCTCAATCTCTA +
Preference number: 4 (lower is better)
Translates to: KRDTTKRSLQWNGSLRTFPLEAV*FAPQSL
Trigger: TAGAGATTGAGGAGCAAACCAAACGGCTTCTAGAGG...GAAGGTCCTTAATGATCCGTTCCATTGCAAGCTTCTTTTAGTTGTATCTCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306482.2
ENST00000615510.4
ENST00000617911.4
CDS-3UTR TCA 90 bp AAAAGAGATACAACTAAAAGAAGCTTGCAATGGAACGGATCATTAAGGACCTTCGTTTATCGAATTCGCTaGACATTTCTGAGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: KRDTTKRSLQWNGSLRTFVYRIR*TFLRRG
Trigger: ACCTCTCCTCAGAAATGTTCAGCGAATTCGATAAAC...GAAGGTCCTTAATGATCCGTTCCATTGCAAGCTTCTTTTAGTTGTATCTCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306482.2
ENST00000615510.4
ENST00000617911.4
ENST00000651757.1
CDS-3UTR TCA 90 bp AAAAGAGATACAACTAAAAGAAGCTTGCAATGGAACGGATCATTAAGGACCTTCCTCAGAAAGTCTTTTTaGTTCATCTGTTGGGCTTGC +
Preference number: 4 (lower is better)
Translates to: KRDTTKRSLQWNGSLRTFLRKSF*FICWAC
Trigger: GCAAGCCCAACAGATGAATCAAAAAGACTTTCTGAG...GAAGGTCCTTAATGATCCGTTCCATTGCAAGCTTCTTTTAGTTGTATCTCTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000306482.2
ENST00000615510.4
ENST00000617911.4
CDS-3UTR TCA 90 bp TTGCAATGGAACGGATCATTAAGGACCTTCTCAGAAATAGATGAAATGGATGTGGGCACTTCAGGAGCTTaGGATAATTGTCGATTTTAT +
Preference number: 4 (lower is better)
Translates to: LQWNGSLRTFSEIDEMDVGTSGA*DNCRFY
Trigger: ATAAAATCGACAATTATCTCAAGCTCCTGAAGTGCC...CACATCCATTTCATCTATTTCTGAGAAGGTCCTTAATGATCCGTTCCATTGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306482.2
ENST00000615510.4
ENST00000617911.4
ENST00000651757.1
CDS-3UTR TCA 90 bp GATACAACTAAAAGAAGCTTGCAATGGAACGGATCATTAAGGACCTTCTCAGAAGGCACTTCAGGAGCTTaGGATAATTGTCGATTTTAT +
Preference number: 4 (lower is better)
Translates to: DTTKRSLQWNGSLRTFSEGTSGA*DNCRFY
Trigger: ATAAAATCGACAATTATCTCAAGCTCCTGAAGTGCC...TTCTGAGAAGGTCCTTAATGATCCGTTCCATTGCAAGCTTCTTTTAGTTGTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306482.2
ENST00000615510.4
ENST00000617911.4
ENST00000651757.1
CDS-3UTR TCA 90 bp AAAAGAGATACAACTAAAAGAAGCTTGCAATGGAACGGATCATTAAGGACCTTCCTTCTCAGAAATAGATaGAATGGATGTGGGCTTAGC +
Preference number: 4 (lower is better)
Translates to: KRDTTKRSLQWNGSLRTFLLRNR*NGCGLS
Trigger: GCTAAGCCCACATCCATTTCATCTATTTCTGAGAAG...GAAGGTCCTTAATGATCCGTTCCATTGCAAGCTTCTTTTAGTTGTATCTCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306482.2
ENST00000615510.4
ENST00000617911.4
ENST00000651757.1
CDS-3UTR TCA 90 bp AAAAGAGATACAACTAAAAGAAGCTTGCAATGGAACGGATCATTAAGGACCTTCTCTTTGGTTTCAGGATaGACATTCATCTGTTGGGCT +
Preference number: 4 (lower is better)
Translates to: KRDTTKRSLQWNGSLRTFSLVSG*TFICWA
Trigger: AGCCCAACAGATGAATGTTCATCCTGAAACCAAAGA...GAAGGTCCTTAATGATCCGTTCCATTGCAAGCTTCTTTTAGTTGTATCTCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651757.1
CDS-3UTR CCA 90 bp TTGCAATGGAACGGATCATTAAGGACCTTCTCAGAAATAGATGAAATGGATGTGAAAAGAAGCTTGCAATaGAACGGATCATTAAGGACC +
Preference number: 4 (lower is better)
Translates to: LQWNGSLRTFSEIDEMDVKRSLQ*NGSLRT
Trigger: GGTCCTTAATGATCCGTTCCATTGCAAGCTTCTTTT...CACATCCATTTCATCTATTTCTGAGAAGGTCCTTAATGATCCGTTCCATTGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306482.2
ENST00000615510.4
ENST00000617911.4
ENST00000651757.1
CDS-3UTR CCA 90 bp GATACAACTAAAAGAAGCTTGCAATGGAACGGATCATTAAGGACCTTCTCAGAAAAAAGAAGCTTGCAATaGAACGGATCATTAAGGACC +
Preference number: 4 (lower is better)
Translates to: DTTKRSLQWNGSLRTFSEKRSLQ*NGSLRT
Trigger: GGTCCTTAATGATCCGTTCCATTGCAAGCTTCTTTT...TTCTGAGAAGGTCCTTAATGATCCGTTCCATTGCAAGCTTCTTTTAGTTGTATC
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000306482.2
ENST00000615510.4
ENST00000617911.4
ENST00000651757.1
CDS-3UTR CCA 90 bp AAAAGAGATACAACTAAAAGAAGCTTGCAATGGAACGGATCATTAAGGACCTTCAAAAGAAGCTTGCAATaGAACGGATCATTAAGGACC +
Preference number: 4 (lower is better)
Translates to: KRDTTKRSLQWNGSLRTFKRSLQ*NGSLRT
Trigger: GGTCCTTAATGATCCGTTCCATTGCAAGCTTCTTTT...GAAGGTCCTTAATGATCCGTTCCATTGCAAGCTTCTTTTAGTTGTATCTCTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306482.2
ENST00000615510.4
ENST00000617911.4
ENST00000651757.1
CDS-3UTR CCA 90 bp TTGCAATGGAACGGATCATTAAGGACCTTCTCAGAAATAGATGAAATGGATGTGTGTTACACCCAAGCATaGATTCAAAAGAGATACAAC +
Preference number: 4 (lower is better)
Translates to: LQWNGSLRTFSEIDEMDVCYTQA*IQKRYN
Trigger: GTTGTATCTCTTTTGAATCCATGCTTGGGTGTAACA...CACATCCATTTCATCTATTTCTGAGAAGGTCCTTAATGATCCGTTCCATTGCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306482.2
ENST00000615510.4
ENST00000617911.4
ENST00000651757.1
CDS-3UTR CCA 90 bp AAAAGAGATACAACTAAAAGAAGCTTGCAATGGAACGGATCATTAAGGACCTTCTCGTTTCCCTTTTCCTaGTCATCTATTTCCGTCATT +
Preference number: 4 (lower is better)
Translates to: KRDTTKRSLQWNGSLRTFSFPFS*SSISVI
Trigger: AATGACGGAAATAGATGACCAGGAAAAGGGAAACGA...GAAGGTCCTTAATGATCCGTTCCATTGCAAGCTTCTTTTAGTTGTATCTCTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000615510.4
ENST00000617911.4
CDS-3UTR TCA 90 bp AAAAGAGATACAACTAAAAGAAGCTTGCAATGGAACGGATCATTAAGGACCTTCATCTATTTCCGTCATTaGGATTACCCCCATAATTTC +
Preference number: 4 (lower is better)
Translates to: KRDTTKRSLQWNGSLRTFIYFRH*DYPHNF
Trigger: GAAATTATGGGGGTAATCTCAATGACGGAAATAGAT...GAAGGTCCTTAATGATCCGTTCCATTGCAAGCTTCTTTTAGTTGTATCTCTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000615510.4
ENST00000617911.4
CDS-3UTR CCA 90 bp GATACAACTAAAAGAAGCTTGCAATGGAACGGATCATTAAGGACCTTCTCAGAAGAGACTAGATTGGTTTaGAGGATCTATAAAACTACA +
Preference number: 4 (lower is better)
Translates to: DTTKRSLQWNGSLRTFSEETRLV*RIYKTT
Trigger: TGTAGTTTTATAGATCCTCCAAACCAATCTAGTCTC...TTCTGAGAAGGTCCTTAATGATCCGTTCCATTGCAAGCTTCTTTTAGTTGTATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615510.4
ENST00000617911.4
CDS-3UTR CCA 90 bp TTGCAATGGAACGGATCATTAAGGACCTTCTCAGAAATAGATGAAATGGATGTGGATCTGAGACTAGATTaGTTTGGAGGATCTATAAAA +
Preference number: 4 (lower is better)
Translates to: LQWNGSLRTFSEIDEMDVDLRLD*FGGSIK
Trigger: TTTTATAGATCCTCCAAACCAATCTAGTCTCAGATC...CACATCCATTTCATCTATTTCTGAGAAGGTCCTTAATGATCCGTTCCATTGCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615510.4
ENST00000617911.4
CDS-3UTR CCA 90 bp AAAAGAGATACAACTAAAAGAAGCTTGCAATGGAACGGATCATTAAGGACCTTCGATCTGAGACTAGATTaGTTTGGAGGATCTATAAAA +
Preference number: 4 (lower is better)
Translates to: KRDTTKRSLQWNGSLRTFDLRLD*FGGSIK
Trigger: TTTTATAGATCCTCCAAACCAATCTAGTCTCAGATC...GAAGGTCCTTAATGATCCGTTCCATTGCAAGCTTCTTTTAGTTGTATCTCTTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615510.4
ENST00000617911.4
CDS CCA 90 bp TGGGACAGGACGACGGCGCGGTCAAACAGGTCTCGAAGGGTCACCTaGCATCGGGCAGCCCCGCCGGGACAGATGGGCAAGGGGGCCACG +
Preference number: 5 (lower is better)
Translates to: WDRTTARSNRSRRVT*HRAAPPGQMGKGAT
Trigger: CGTGGCCCCCTTGCCCATCTGTCCCGGCGGGGCTGCCCGATGCCAGGTGACCCTTCGAGACCTGTTTGACCGCGCCGTCGTCCTGTCCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306482.2
ENST00000617911.4
ENST00000651245.1
ENST00000651757.1
CDS CCA 90 bp CATCGGGCAGCCCCGCCGGGACAGATGGGCAAGGGGGCCACGCTCTaGCACAGGAGCAGGTTTGACACCAGCAGCAGCAGGAGGGACCCT +
Preference number: 5 (lower is better)
Translates to: HRAAPPGQMGKGATL*HRSRFDTSSSRRDP
Trigger: AGGGTCCCTCCTGCTGCTGCTGGTGTCAAACCTGCTCCTGTGCCAGAGCGTGGCCCCCTTGCCCATCTGTCCCGGCGGGGCTGCCCGATG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306482.2
ENST00000617911.4
ENST00000651245.1
ENST00000651757.1
CDS CCA 90 bp GGTCTCGAAGGGTCACCTGGCATCGGGCAGCCCCGCCGGGACAGATaGGCAAGGGGGCCACGCTCTGGCACAGGAGCAGGTTTGACACCA +
Preference number: 5 (lower is better)
Translates to: GLEGSPGIGQPRRDR*ARGPRSGTGAGLTP
Trigger: TGGTGTCAAACCTGCTCCTGTGCCAGAGCGTGGCCCCCTTGCCCATCTGTCCCGGCGGGGCTGCCCGATGCCAGGTGACCCTTCGAGACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306482.2
ENST00000617911.4
ENST00000651245.1
ENST00000651757.1
CDS GCA 90 bp ACCTGGCTGACTATCAGCTCCATGCCCTCTAGAAGCCGTTTGGTTTaGTCCTCAATCTCTACAGCTTTGGATAGGATAGCCTCCGGGGCT +
Preference number: 5 (lower is better)
Translates to: TWLTISSMPSRSRLV*SSISTALDRIASGA
Trigger: AGCCCCGGAGGCTATCCTATCCAAAGCTGTAGAGATTGAGGAGCAAACCAAACGGCTTCTAGAGGGCATGGAGCTGATAGTCAGCCAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306482.2
ENST00000615510.4
ENST00000617911.4
CDS TCA 90 bp ATAGCCTCCGGGGCTTCTTGCATACCACGTACTTCCGTGACCAGATaGTACAGAGGCTCATTCCAGGATCGCAATATGCTGACTATCAGG +
Preference number: 5 (lower is better)
Translates to: IASGASCIPRTSVTR*YRGSFQDRNMLTIR
Trigger: CCTGATAGTCAGCATATTGCGATCCTGGAATGAGCCTCTGTATCATCTGGTCACGGAAGTACGTGGTATGCAAGAAGCCCCGGAGGCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306482.2
ENST00000615510.4
ENST00000617911.4
ENST00000651245.1
CDS GCA 90 bp GGACCCTTTCCATGGCGATCCTTTGATGTTCATGTTCGTGATCGTTaGAGGAAACACACTTCACCAGAGAAGATCTGGAAGTCTCACGGT +
Preference number: 5 (lower is better)
Translates to: GPFPWRSFDVHVRDR*RKHTSPEKIWKSHG
Trigger: ACCGTGAGACTTCCAGATCTTCTCTGGTGAAGTGTGTTTCCTGCAACGATCACGAACATGAACATCAAAGGATCGCCATGGAAAGGGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000615510.4
ENST00000651245.1
ENST00000651757.1
CDS GCA 90 bp CCCTGCTTTCCATGGCGATCCTTTGATGTTCATGTTCGTGATCGTTaGAGGAAACACACTTCACCAGAGAAGATCTGGAAGTCTCACGGT +
Preference number: 5 (lower is better)
Translates to: PCFPWRSFDVHVRDR*RKHTSPEKIWKSHG
Trigger: ACCGTGAGACTTCCAGATCTTCTCTGGTGAAGTGTGTTTCCTGCAACGATCACGAACATGAACATCAAAGGATCGCCATGGAAAGCAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617911.4
CDS-3UTR CAA 90 bp TTGCAATGGAACGGATCATTAAGGACCTTCTCAGAAATAGATGAAATGGATGTGTGTTGGGCTTGCTCCTaGTCTTCGGGGGTGGCAAGG +
Preference number: 5 (lower is better)
Translates to: LQWNGSLRTFSEIDEMDVCWACS*SSGVAR
Trigger: CCTTGCCACCCCCGAAGACAAGGAGCAAGCCCAACA...CACATCCATTTCATCTATTTCTGAGAAGGTCCTTAATGATCCGTTCCATTGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306482.2
ENST00000615510.4
ENST00000617911.4
ENST00000651757.1
CDS-3UTR CAA 90 bp GATACAACTAAAAGAAGCTTGCAATGGAACGGATCATTAAGGACCTTCTCAGAATGTTGGGCTTGCTCCTaGTCTTCGGGGGTGGCAAGG +
Preference number: 5 (lower is better)
Translates to: DTTKRSLQWNGSLRTFSECWACS*SSGVAR
Trigger: CCTTGCCACCCCCGAAGACAAGGAGCAAGCCCAACA...TTCTGAGAAGGTCCTTAATGATCCGTTCCATTGCAAGCTTCTTTTAGTTGTATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306482.2
ENST00000615510.4
ENST00000617911.4
ENST00000651757.1
CDS CCA 90 bp ATAATAAGCAGAAAGGCGAGACTCTTCATCAGCCATCTGCAGGGATaGAAGTCCCGACCAGACAGGGTAGATCTCATTTTCTTTGGTTTC +
Preference number: 5 (lower is better)
Translates to: IISRKARLFISHLQG*KSRPDRVDLIFFGF
Trigger: GAAACCAAAGAAAATGAGATCTACCCTGTCTGGTCGGGACTTCCATCCCTGCAGATGGCTGATGAAGAGTCTCGCCTTTCTGCTTATTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306482.2
ENST00000615510.4
ENST00000617911.4
ENST00000651757.1
CDS-3UTR CAA 90 bp TTGCAATGGAACGGATCATTAAGGACCTTCTCAGAAATAGATGAAATGGATGTGCAGCTGTTGATGGCCTaGGTAATGAACCCCCGGCCA +
Preference number: 5 (lower is better)
Translates to: LQWNGSLRTFSEIDEMDVQLLMA*VMNPRP
Trigger: TGGCCGGGGGTTCATTACCAAGGCCATCAACAGCTG...CACATCCATTTCATCTATTTCTGAGAAGGTCCTTAATGATCCGTTCCATTGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306482.2
ENST00000615510.4
ENST00000617911.4
ENST00000651757.1
CDS-3UTR CAA 90 bp GATACAACTAAAAGAAGCTTGCAATGGAACGGATCATTAAGGACCTTCTCAGAACAGCTGTTGATGGCCTaGGTAATGAACCCCCGGCCA +
Preference number: 5 (lower is better)
Translates to: DTTKRSLQWNGSLRTFSEQLLMA*VMNPRP
Trigger: TGGCCGGGGGTTCATTACCAAGGCCATCAACAGCTG...TTCTGAGAAGGTCCTTAATGATCCGTTCCATTGCAAGCTTCTTTTAGTTGTATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306482.2
ENST00000615510.4
ENST00000617911.4
ENST00000651757.1
CDS-3UTR CAA 90 bp GATACAACTAAAAGAAGCTTGCAATGGAACGGATCATTAAGGACCTTCTCAGAAAGCCTCCGGGGCTTCTaGCATACCACGTACTTCCGT +
Preference number: 5 (lower is better)
Translates to: DTTKRSLQWNGSLRTFSESLRGF*HTTYFR
Trigger: ACGGAAGTACGTGGTATGCAAGAAGCCCCGGAGGCT...TTCTGAGAAGGTCCTTAATGATCCGTTCCATTGCAAGCTTCTTTTAGTTGTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306482.2
ENST00000615510.4
ENST00000617911.4
CDS-3UTR CAA 90 bp AAAAGAGATACAACTAAAAGAAGCTTGCAATGGAACGGATCATTAAGGACCTTCCAGCTGTTGATGGCCTaGGTAATGAACCCCCGGCCA +
Preference number: 5 (lower is better)
Translates to: KRDTTKRSLQWNGSLRTFQLLMA*VMNPRP
Trigger: TGGCCGGGGGTTCATTACCAAGGCCATCAACAGCTG...GAAGGTCCTTAATGATCCGTTCCATTGCAAGCTTCTTTTAGTTGTATCTCTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306482.2
ENST00000615510.4
ENST00000617911.4
ENST00000651757.1
CDS-3UTR CAA 90 bp TTGCAATGGAACGGATCATTAAGGACCTTCTCAGAAATAGATGAAATGGATGTGATTCATCTGTTGGGCTaGCTCCTTGTCTTCGGGGGT +
Preference number: 5 (lower is better)
Translates to: LQWNGSLRTFSEIDEMDVIHLLG*LLVFGG
Trigger: ACCCCCGAAGACAAGGAGCAAGCCCAACAGATGAAT...CACATCCATTTCATCTATTTCTGAGAAGGTCCTTAATGATCCGTTCCATTGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306482.2
ENST00000615510.4
ENST00000617911.4
ENST00000651757.1
CDS-3UTR CAA 90 bp AAAAGAGATACAACTAAAAGAAGCTTGCAATGGAACGGATCATTAAGGACCTTCATTCATCTGTTGGGCTaGCTCCTTGTCTTCGGGGGT +
Preference number: 5 (lower is better)
Translates to: KRDTTKRSLQWNGSLRTFIHLLG*LLVFGG
Trigger: ACCCCCGAAGACAAGGAGCAAGCCCAACAGATGAAT...GAAGGTCCTTAATGATCCGTTCCATTGCAAGCTTCTTTTAGTTGTATCTCTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306482.2
ENST00000615510.4
ENST00000617911.4
ENST00000651757.1
CDS-3UTR CAA 90 bp GATACAACTAAAAGAAGCTTGCAATGGAACGGATCATTAAGGACCTTCTCAGAATCAATCTCTACAGCTTaGGATAGGATAGCCTCCGGG +
Preference number: 5 (lower is better)
Translates to: DTTKRSLQWNGSLRTFSESISTA*DRIASG
Trigger: CCCGGAGGCTATCCTATCCAAAGCTGTAGAGATTGA...TTCTGAGAAGGTCCTTAATGATCCGTTCCATTGCAAGCTTCTTTTAGTTGTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306482.2
ENST00000615510.4
ENST00000617911.4
CDS-3UTR CAA 90 bp TTGCAATGGAACGGATCATTAAGGACCTTCTCAGAAATAGATGAAATGGATGTGTCAATCTCTACAGCTTaGGATAGGATAGCCTCCGGG +
Preference number: 5 (lower is better)
Translates to: LQWNGSLRTFSEIDEMDVSISTA*DRIASG
Trigger: CCCGGAGGCTATCCTATCCAAAGCTGTAGAGATTGA...CACATCCATTTCATCTATTTCTGAGAAGGTCCTTAATGATCCGTTCCATTGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306482.2
ENST00000615510.4
ENST00000617911.4
CDS-3UTR CAA 90 bp TTGCAATGGAACGGATCATTAAGGACCTTCTCAGAAATAGATGAAATGGATGTGCCCTCTAGAAGCCGTTaGGTTTGCTCCTCAATCTCT +
Preference number: 5 (lower is better)
Translates to: LQWNGSLRTFSEIDEMDVPSRSR*VCSSIS
Trigger: AGAGATTGAGGAGCAAACCAAACGGCTTCTAGAGGG...CACATCCATTTCATCTATTTCTGAGAAGGTCCTTAATGATCCGTTCCATTGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306482.2
ENST00000615510.4
ENST00000617911.4
CDS-3UTR CAA 90 bp GATACAACTAAAAGAAGCTTGCAATGGAACGGATCATTAAGGACCTTCTCAGAACCCTCTAGAAGCCGTTaGGTTTGCTCCTCAATCTCT +
Preference number: 5 (lower is better)
Translates to: DTTKRSLQWNGSLRTFSEPSRSR*VCSSIS
Trigger: AGAGATTGAGGAGCAAACCAAACGGCTTCTAGAGGG...TTCTGAGAAGGTCCTTAATGATCCGTTCCATTGCAAGCTTCTTTTAGTTGTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306482.2
ENST00000615510.4
ENST00000617911.4
CDS-3UTR CAA 90 bp AAAAGAGATACAACTAAAAGAAGCTTGCAATGGAACGGATCATTAAGGACCTTCTCAATCTCTACAGCTTaGGATAGGATAGCCTCCGGG +
Preference number: 5 (lower is better)
Translates to: KRDTTKRSLQWNGSLRTFSISTA*DRIASG
Trigger: CCCGGAGGCTATCCTATCCAAAGCTGTAGAGATTGA...GAAGGTCCTTAATGATCCGTTCCATTGCAAGCTTCTTTTAGTTGTATCTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306482.2
ENST00000615510.4
ENST00000617911.4
CDS-3UTR CAA 90 bp GATACAACTAAAAGAAGCTTGCAATGGAACGGATCATTAAGGACCTTCTCAGAATTCCATGGCGATCCTTaGATGTTCATGTTCGTGATC +
Preference number: 5 (lower is better)
Translates to: DTTKRSLQWNGSLRTFSEFHGDP*MFMFVI
Trigger: GATCACGAACATGAACATCAAAGGATCGCCATGGAA...TTCTGAGAAGGTCCTTAATGATCCGTTCCATTGCAAGCTTCTTTTAGTTGTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306482.2
ENST00000615510.4
ENST00000617911.4
ENST00000651757.1
CDS-3UTR CAA 90 bp TTGCAATGGAACGGATCATTAAGGACCTTCTCAGAAATAGATGAAATGGATGTGTTCCATGGCGATCCTTaGATGTTCATGTTCGTGATC +
Preference number: 5 (lower is better)
Translates to: LQWNGSLRTFSEIDEMDVFHGDP*MFMFVI
Trigger: GATCACGAACATGAACATCAAAGGATCGCCATGGAA...CACATCCATTTCATCTATTTCTGAGAAGGTCCTTAATGATCCGTTCCATTGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306482.2
ENST00000615510.4
ENST00000617911.4
ENST00000651757.1
CDS-3UTR CAA 90 bp GATACAACTAAAAGAAGCTTGCAATGGAACGGATCATTAAGGACCTTCTCAGAAATGTTCCGATTCTTCTaGGTGTCTCTGTCTTTGAGG +
Preference number: 5 (lower is better)
Translates to: DTTKRSLQWNGSLRTFSEMFRFF*VSLSLR
Trigger: CCTCAAAGACAGAGACACCAAGAAGAATCGGAACAT...TTCTGAGAAGGTCCTTAATGATCCGTTCCATTGCAAGCTTCTTTTAGTTGTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651757.1
CDS-3UTR CAA 90 bp TTGCAATGGAACGGATCATTAAGGACCTTCTCAGAAATAGATGAAATGGATGTGATGAACATTCATCTGTaGGGCTTGCTCCTTGTCTTC +
Preference number: 5 (lower is better)
Translates to: LQWNGSLRTFSEIDEMDVMNIHL*GLLLVF
Trigger: GAAGACAAGGAGCAAGCCCAACAGATGAATGTTCAT...CACATCCATTTCATCTATTTCTGAGAAGGTCCTTAATGATCCGTTCCATTGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651757.1
CDS CCA 90 bp CCAGAGAAGATCTGGAAGTCTCACGGTTTTCTCTTTCCCAGATATTaGCTTTATAAACCTTTGATATCAAAGCCTGTATGTTCCGATTCT +
Preference number: 5 (lower is better)
Translates to: PEKIWKSHGFLFPRY*LYKPLISKPVCSDS
Trigger: AGAATCGGAACATACAGGCTTTGATATCAAAGGTTTATAAAGCCAATATCTGGGAAAGAGAAAACCGTGAGACTTCCAGATCTTCTCTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651245.1
ENST00000651757.1
CDS-3UTR CAA 90 bp GATACAACTAAAAGAAGCTTGCAATGGAACGGATCATTAAGGACCTTCTCAGAATTTTTGATTCATCTGTaGGGCTTGCTCCTTGTCTTC +
Preference number: 5 (lower is better)
Translates to: DTTKRSLQWNGSLRTFSEFLIHL*GLLLVF
Trigger: GAAGACAAGGAGCAAGCCCAACAGATGAATCAAAAA...TTCTGAGAAGGTCCTTAATGATCCGTTCCATTGCAAGCTTCTTTTAGTTGTATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000306482.2
ENST00000615510.4
ENST00000617911.4
CDS-3UTR CAA 90 bp TTGCAATGGAACGGATCATTAAGGACCTTCTCAGAAATAGATGAAATGGATGTGGCTCAGAAAGTCTTTTaGATTCATCTGTTGGGCTTG +
Preference number: 5 (lower is better)
Translates to: LQWNGSLRTFSEIDEMDVAQKVF*IHLLGL
Trigger: CAAGCCCAACAGATGAATCAAAAAGACTTTCTGAGC...CACATCCATTTCATCTATTTCTGAGAAGGTCCTTAATGATCCGTTCCATTGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306482.2
ENST00000615510.4
ENST00000617911.4
CDS-3UTR CAA 90 bp GATACAACTAAAAGAAGCTTGCAATGGAACGGATCATTAAGGACCTTCTCAGAAGCTCAGAAAGTCTTTTaGATTCATCTGTTGGGCTTG +
Preference number: 5 (lower is better)
Translates to: DTTKRSLQWNGSLRTFSEAQKVF*IHLLGL
Trigger: CAAGCCCAACAGATGAATCAAAAAGACTTTCTGAGC...TTCTGAGAAGGTCCTTAATGATCCGTTCCATTGCAAGCTTCTTTTAGTTGTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306482.2
ENST00000615510.4
ENST00000617911.4
CDS-3UTR CAA 90 bp AAAAGAGATACAACTAAAAGAAGCTTGCAATGGAACGGATCATTAAGGACCTTCTTTTTGATTCATCTGTaGGGCTTGCTCCTTGTCTTC +
Preference number: 5 (lower is better)
Translates to: KRDTTKRSLQWNGSLRTFFLIHL*GLLLVF
Trigger: GAAGACAAGGAGCAAGCCCAACAGATGAATCAAAAA...GAAGGTCCTTAATGATCCGTTCCATTGCAAGCTTCTTTTAGTTGTATCTCTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000306482.2
ENST00000615510.4
ENST00000617911.4
CDS-3UTR CAA 90 bp AAAAGAGATACAACTAAAAGAAGCTTGCAATGGAACGGATCATTAAGGACCTTCGCTCAGAAAGTCTTTTaGATTCATCTGTTGGGCTTG +
Preference number: 5 (lower is better)
Translates to: KRDTTKRSLQWNGSLRTFAQKVF*IHLLGL
Trigger: CAAGCCCAACAGATGAATCAAAAAGACTTTCTGAGC...GAAGGTCCTTAATGATCCGTTCCATTGCAAGCTTCTTTTAGTTGTATCTCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000306482.2
ENST00000615510.4
ENST00000617911.4
CDS-3UTR CAA 90 bp TTGCAATGGAACGGATCATTAAGGACCTTCTCAGAAATAGATGAAATGGATGTGACAACTAAAAGAAGCTaGCAATGGAACGGATCATTA +
Preference number: 5 (lower is better)
Translates to: LQWNGSLRTFSEIDEMDVTTKRS*QWNGSL
Trigger: TAATGATCCGTTCCATTGCAAGCTTCTTTTAGTTGT...CACATCCATTTCATCTATTTCTGAGAAGGTCCTTAATGATCCGTTCCATTGCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306482.2
ENST00000615510.4
ENST00000617911.4
ENST00000651757.1
CDS-3UTR CAA 90 bp GATACAACTAAAAGAAGCTTGCAATGGAACGGATCATTAAGGACCTTCTCAGAAACAACTAAAAGAAGCTaGCAATGGAACGGATCATTA +
Preference number: 5 (lower is better)
Translates to: DTTKRSLQWNGSLRTFSETTKRS*QWNGSL
Trigger: TAATGATCCGTTCCATTGCAAGCTTCTTTTAGTTGT...TTCTGAGAAGGTCCTTAATGATCCGTTCCATTGCAAGCTTCTTTTAGTTGTATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306482.2
ENST00000615510.4
ENST00000617911.4
ENST00000651757.1
CDS-3UTR CAA 90 bp GATACAACTAAAAGAAGCTTGCAATGGAACGGATCATTAAGGACCTTCTCAGAAAGATCTGAGACTAGATaGGTTTGGAGGATCTATAAA +
Preference number: 5 (lower is better)
Translates to: DTTKRSLQWNGSLRTFSERSETR*VWRIYK
Trigger: TTTATAGATCCTCCAAACCAATCTAGTCTCAGATCT...TTCTGAGAAGGTCCTTAATGATCCGTTCCATTGCAAGCTTCTTTTAGTTGTATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615510.4
ENST00000617911.4
CDS-3UTR CAA 90 bp AAAAGAGATACAACTAAAAGAAGCTTGCAATGGAACGGATCATTAAGGACCTTCACAACTAAAAGAAGCTaGCAATGGAACGGATCATTA +
Preference number: 5 (lower is better)
Translates to: KRDTTKRSLQWNGSLRTFTTKRS*QWNGSL
Trigger: TAATGATCCGTTCCATTGCAAGCTTCTTTTAGTTGT...GAAGGTCCTTAATGATCCGTTCCATTGCAAGCTTCTTTTAGTTGTATCTCTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306482.2
ENST00000615510.4
ENST00000617911.4
ENST00000651757.1
CDS-3UTR CAA 90 bp AAAAGAGATACAACTAAAAGAAGCTTGCAATGGAACGGATCATTAAGGACCTTCAGATCTGAGACTAGATaGGTTTGGAGGATCTATAAA +
Preference number: 5 (lower is better)
Translates to: KRDTTKRSLQWNGSLRTFRSETR*VWRIYK
Trigger: TTTATAGATCCTCCAAACCAATCTAGTCTCAGATCT...GAAGGTCCTTAATGATCCGTTCCATTGCAAGCTTCTTTTAGTTGTATCTCTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615510.4
ENST00000617911.4
CDS CCA 72 bp GCCCCGCCGGGACAGATGGGCAAGGGGGCCACGCTCTaGCACAGGAGCAGGTTTGACACCAGCAGCAGCAGG +
Preference number: 6 (lower is better)
Translates to: APPGQMGKGATL*HRSRFDTSSSR
Trigger: CCTGCTGCTGCTGGTGTCAAACCTGCTCCTGTGCCAGAGCGTGGCCCCCTTGCCCATCTGTCCCGGCGGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306482.2
ENST00000617911.4
ENST00000651245.1
ENST00000651757.1
CDS CCA 72 bp ACGACGGCGCGGTCAAACAGGTCTCGAAGGGTCACCTaGCATCGGGCAGCCCCGCCGGGACAGATGGGCAAG +
Preference number: 6 (lower is better)
Translates to: TTARSNRSRRVT*HRAAPPGQMGK
Trigger: CTTGCCCATCTGTCCCGGCGGGGCTGCCCGATGCCAGGTGACCCTTCGAGACCTGTTTGACCGCGCCGTCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306482.2
ENST00000617911.4
ENST00000651245.1
ENST00000651757.1
CDS CAA 90 bp TGCTCCTTGTCTTCGGGGGTGGCAAGGGAAGAAGTGTGGCAGCTGTaGATGGCCTTGGTAATGAACCCCCGGCCATGGGTATACCGTTTA +
Preference number: 6 (lower is better)
Translates to: CSLSSGVAREEVWQL*MALVMNPRPWVYRL
Trigger: TAAACGGTATACCCATGGCCGGGGGTTCATTACCAAGGCCATCAACAGCTGCCACACTTCTTCCCTTGCCACCCCCGAAGACAAGGAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000306482.2
ENST00000615510.4
ENST00000617911.4
ENST00000651245.1
ENST00000651757.1
CDS CAA 90 bp TCTTCGGGGGTGGCAAGGGAAGAAGTGTGGCAGCTGTTGATGGCCTaGGTAATGAACCCCCGGCCATGGGTATACCGTTTATCGAATTCG +
Preference number: 6 (lower is better)
Translates to: SSGVAREEVWQLLMA*VMNPRPWVYRLSNS
Trigger: CGAATTCGATAAACGGTATACCCATGGCCGGGGGTTCATTACCAAGGCCATCAACAGCTGCCACACTTCTTCCCTTGCCACCCCCGAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000306482.2
ENST00000615510.4
ENST00000617911.4
ENST00000651245.1
ENST00000651757.1
CDS CAA 90 bp ATGCCCTCTAGAAGCCGTTTGGTTTGCTCCTCAATCTCTACAGCTTaGGATAGGATAGCCTCCGGGGCTTCTTGCATACCACGTACTTCC +
Preference number: 6 (lower is better)
Translates to: MPSRSRLVCSSISTA*DRIASGASCIPRTS
Trigger: GGAAGTACGTGGTATGCAAGAAGCCCCGGAGGCTATCCTATCCAAAGCTGTAGAGATTGAGGAGCAAACCAAACGGCTTCTAGAGGGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306482.2
ENST00000615510.4
ENST00000617911.4
CDS TCA 72 bp GGGGCTTCTTGCATACCACGTACTTCCGTGACCAGATaGTACAGAGGCTCATTCCAGGATCGCAATATGCTG +
Preference number: 6 (lower is better)
Translates to: GASCIPRTSVTR*YRGSFQDRNML
Trigger: CAGCATATTGCGATCCTGGAATGAGCCTCTGTATCATCTGGTCACGGAAGTACGTGGTATGCAAGAAGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306482.2
ENST00000615510.4
ENST00000617911.4
ENST00000651245.1
CDS CCA 72 bp AGAAAGGCGAGACTCTTCATCAGCCATCTGCAGGGATaGAAGTCCCGACCAGACAGGGTAGATCTCATTTTC +
Preference number: 6 (lower is better)
Translates to: RKARLFISHLQG*KSRPDRVDLIF
Trigger: GAAAATGAGATCTACCCTGTCTGGTCGGGACTTCCATCCCTGCAGATGGCTGATGAAGAGTCTCGCCTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306482.2
ENST00000615510.4
ENST00000617911.4
ENST00000651757.1
CDS CAA 72 bp AGCAGCAGGAGGGACCCTGCTTTCCATGGCGATCCTTaGATGTTCATGTTCGTGATCGTTGCAGGAAACACA +
Preference number: 6 (lower is better)
Translates to: SSRRDPAFHGDP*MFMFVIVAGNT
Trigger: TGTGTTTCCTGCAACGATCACGAACATGAACATCAAAGGATCGCCATGGAAAGCAGGGTCCCTCCTGCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617911.4
CDS CAA 72 bp CAGGCTCAGAAAGTCTTTTTGATTCATCTGTTGGGCTaGCTCCTTGTCTTCGGGGGTGGCAAGGGAAGAAGT +
Preference number: 6 (lower is better)
Translates to: QAQKVFLIHLLG*LLVFGGGKGRS
Trigger: ACTTCTTCCCTTGCCACCCCCGAAGACAAGGAGCAAGCCCAACAGATGAATCAAAAAGACTTTCTGAGCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000306482.2
ENST00000615510.4
ENST00000617911.4
ENST00000651245.1
CDS CAA 72 bp AGAAGCCGTTTGGTTTGCTCCTCAATCTCTACAGCTTaGGATAGGATAGCCTCCGGGGCTTCTTGCATACCA +
Preference number: 6 (lower is better)
Translates to: RSRLVCSSISTA*DRIASGASCIP
Trigger: TGGTATGCAAGAAGCCCCGGAGGCTATCCTATCCAAAGCTGTAGAGATTGAGGAGCAAACCAAACGGCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306482.2
ENST00000615510.4
ENST00000617911.4
CDS CAA 72 bp TGGCTGACTATCAGCTCCATGCCCTCTAGAAGCCGTTaGGTTTGCTCCTCAATCTCTACAGCTTTGGATAGG +
Preference number: 6 (lower is better)
Translates to: WLTISSMPSRSR*VCSSISTALDR
Trigger: CCTATCCAAAGCTGTAGAGATTGAGGAGCAAACCAAACGGCTTCTAGAGGGCATGGAGCTGATAGTCAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306482.2
ENST00000615510.4
ENST00000617911.4
CDS GCA 72 bp ACTATCAGCTCCATGCCCTCTAGAAGCCGTTTGGTTTaGTCCTCAATCTCTACAGCTTTGGATAGGATAGCC +
Preference number: 6 (lower is better)
Translates to: TISSMPSRSRLV*SSISTALDRIA
Trigger: GGCTATCCTATCCAAAGCTGTAGAGATTGAGGAGCAAACCAAACGGCTTCTAGAGGGCATGGAGCTGATAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306482.2
ENST00000615510.4
ENST00000617911.4
CDS CCA 72 bp CAGCTGTTGATGGCCTTGGTAATGAACCCCCGGCCATaGGTATACCGTTTATCGAATTCGCTGAACATTTCT +
Preference number: 6 (lower is better)
Translates to: QLLMALVMNPRP*VYRLSNSLNIS
Trigger: AGAAATGTTCAGCGAATTCGATAAACGGTATACCCATGGCCGGGGGTTCATTACCAAGGCCATCAACAGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306482.2
ENST00000615510.4
ENST00000617911.4
ENST00000651245.1
ENST00000651757.1
CDS CAA 72 bp TTCTTTGGTTTCAGGATGAACATTCATCTGTTGGGCTaGCTCCTTGTCTTCGGGGGTGGCAAGGGAAGAAGT +
Preference number: 6 (lower is better)
Translates to: FFGFRMNIHLLG*LLVFGGGKGRS
Trigger: ACTTCTTCCCTTGCCACCCCCGAAGACAAGGAGCAAGCCCAACAGATGAATGTTCATCCTGAAACCAAAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651757.1
CDS GCA 72 bp CCATGGCGATCCTTTGATGTTCATGTTCGTGATCGTTaGAGGAAACACACTTCACCAGAGAAGATCTGGAAG +
Preference number: 6 (lower is better)
Translates to: PWRSFDVHVRDR*RKHTSPEKIWK
Trigger: CTTCCAGATCTTCTCTGGTGAAGTGTGTTTCCTGCAACGATCACGAACATGAACATCAAAGGATCGCCATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306482.2
ENST00000615510.4
ENST00000617911.4
ENST00000651245.1
ENST00000651757.1
CDS TCA 72 bp ATGGGTATACCGTTTATCGAATTCGCTGAACATTTCTaGGGAGAGGTTATGGATGTAGTGGGACAGGAGCAG +
Preference number: 6 (lower is better)
Translates to: MGIPFIEFAEHF*GEVMDVVGQEQ
Trigger: CTGCTCCTGTCCCACTACATCCATAACCTCTCCTCAGAAATGTTCAGCGAATTCGATAAACGGTATACCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615510.4
CDS CCA 72 bp GATCGTTGCAGGAAACACACTTCACCAGAGAAGATCTaGAAGTCTCACGGTTTTCTCTTTCCCAGATATTGG +
Preference number: 6 (lower is better)
Translates to: DRCRKHTSPEKI*KSHGFLFPRYW
Trigger: CCAATATCTGGGAAAGAGAAAACCGTGAGACTTCCAGATCTTCTCTGGTGAAGTGTGTTTCCTGCAACGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000615510.4
ENST00000617911.4
ENST00000651245.1
ENST00000651757.1
CDS CCA 72 bp GAAGTCCCGACCAGACAGGGTAGATCTCATTTTCTTTaGTTTCAGGATGAACATTCATCTGTTGGGCTTGCT +
Preference number: 6 (lower is better)
Translates to: EVPTRQGRSHFL*FQDEHSSVGLA
Trigger: AGCAAGCCCAACAGATGAATGTTCATCCTGAAACCAAAGAAAATGAGATCTACCCTGTCTGGTCGGGACTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651757.1
CDS TCA 72 bp TTCGTTTCCCTTTTCCTGGTCATCTATTTCCGTCATTaGGATTACCCCCATAATTTCAAACATCAAATGGTA +
Preference number: 6 (lower is better)
Translates to: FVSLFLVIYFRH*DYPHNFKHQMV
Trigger: TACCATTTGATGTTTGAAATTATGGGGGTAATCTCAATGACGGAAATAGATGACCAGGAAAAGGGAAACGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615510.4
ENST00000617911.4
CDS CAA 72 bp ATGAGAGAAATGATGAAGGTGAGATCTGAGACTAGATaGGTTTGGAGGATCTATAAAACTACAGAAGTCATT +
Preference number: 6 (lower is better)
Translates to: MREMMKVRSETR*VWRIYKTTEVI
Trigger: AATGACTTCTGTAGTTTTATAGATCCTCCAAACCAATCTAGTCTCAGATCTCACCTTCATCATTTCTCTCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615510.4
ENST00000617911.4