RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PRKG2 (Homo sapiens)

Ensembl gene IDs: ENSG00000138669

Ensembl transcript IDs: ENST00000264399.5, ENST00000264399.6, ENST00000395578.3, ENST00000456882.2, ENST00000509169.5, ENST00000509474.5, ENST00000545647.5, ENST00000628926.1

Found 302 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ACTCATGTCAGAGGCGTATTAATATATTTTCAGGTTAAAAGCAGGTaGAAGTCAGGAGGTTCTGTTGGCTACCATGGTTTCTGCAAACCA +
Preference number: 1 (lower is better)
Translates to: THVRGVLIYFQVKSR*KSGGSVGYHGFCKP
Trigger: TGGTTTGCAGAAACCATGGTAGCCAACAGAACCTCCTGACTTTCACCTGCTTTTAACCTGAAAATATATTAATACGCCTCTGACATGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264399.5
ENST00000395578.3
ENST00000545647.5
3UTR-3UTR CCA 90 bp GTTACTTTAGGAAATGGTGCCACTGACTATTGCTCAATCTTGCCTCTCCCTGGAGAAGTTGCTGAGAGCTaGGGAGCTCTCCAAAATTCA +
Preference number: 2 (lower is better)
Translates to: VTLGNGATDYCSILPLPGEVAES*GALQNS
Trigger: TGAATTTTGGAGAGCTCCCCAGCTCTCAGCAACTTC...TCCAGGGAGAGGCAAGATTGAGCAATAGTCAGTGGCACCATTTCCTAAAGTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264399.5
ENST00000395578.3
ENST00000545647.5
3UTR-3UTR TCA 90 bp GGAAGGGATAGGAGGGATGCTGTTGTCCCTTTTACTTCTGAAATCCTATCACTTAGGAAATGGTGCCACTaGCTATTGCTCAATCTTGCC +
Preference number: 2 (lower is better)
Translates to: GRDRRDAVVPFTSEILSLRKWCH*LLLNLA
Trigger: GGCAAGATTGAGCAATAGTCAGTGGCACCATTTCCT...AAGTGATAGGATTTCAGAAGTAAAAGGGACAACAGCATCCCTCCTATCCCTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264399.5
ENST00000545647.5
3UTR-3UTR TCA 90 bp CCACCATGCTTATATGAAGTTGCTGAGAGCTGGGGAGCTCTCCAAAATTCACCAAATGTGTTGGATTATTaGTCCTTGAGGTCCTCTTCT +
Preference number: 2 (lower is better)
Translates to: PPCLYEVAESWGALQNSPNVLDY*SLRSSS
Trigger: AGAAGAGGACCTCAAGGATCAATAATCCAACACATT...TGGTGAATTTTGGAGAGCTCCCCAGCTCTCAGCAACTTCATATAAGCATGGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264399.5
ENST00000395578.3
ENST00000545647.5
3UTR-3UTR TCA 90 bp GTTACTTTAGGAAATGGTGCCACTGACTATTGCTCAATCTTGCCTCTCCCTGGAAATGTGTTGGATTATTaGTCCTTGAGGTCCTCTTCT +
Preference number: 2 (lower is better)
Translates to: VTLGNGATDYCSILPLPGNVLDY*SLRSSS
Trigger: AGAAGAGGACCTCAAGGATCAATAATCCAACACATT...TCCAGGGAGAGGCAAGATTGAGCAATAGTCAGTGGCACCATTTCCTAAAGTAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264399.5
ENST00000395578.3
ENST00000545647.5
3UTR-3UTR GCA 90 bp CATTTTAAGATACCACCATGCTTATATGAAGTTGCTGAGAGCTGGGGAGCTCTCCTCCTCTTCCCATTGTaGAGGAATTTCTTTTCCCTA +
Preference number: 2 (lower is better)
Translates to: HFKIPPCLYEVAESWGALLLFPL*RNFFSL
Trigger: TAGGGAAAAGAAATTCCTGCACAATGGGAAGAGGAG...GAGAGCTCCCCAGCTCTCAGCAACTTCATATAAGCATGGTGGTATCTTAAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264399.5
ENST00000395578.3
ENST00000545647.5
3UTR-3UTR GCA 90 bp TCAGTTACTTTAGGAAATGGTGCCACTGACTATTGCTCAATCTTGCCTCTCCCTCTCCTCTTCCCATTGTaGAGGAATTTCTTTTCCCTA +
Preference number: 2 (lower is better)
Translates to: SVTLGNGATDYCSILPLPLLFPL*RNFFSL
Trigger: TAGGGAAAAGAAATTCCTGCACAATGGGAAGAGGAG...AGGGAGAGGCAAGATTGAGCAATAGTCAGTGGCACCATTTCCTAAAGTAACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264399.5
ENST00000395578.3
ENST00000545647.5
3UTR-3UTR CCA 90 bp TCAGTTACTTTAGGAAATGGTGCCACTGACTATTGCTCAATCTTGCCTCTCCCTTTCTGTTGGCTACCATaGTTTCTGCAAACCACCATT +
Preference number: 2 (lower is better)
Translates to: SVTLGNGATDYCSILPLPFCWLP*FLQTTI
Trigger: AATGGTGGTTTGCAGAAACCATGGTAGCCAACAGAA...AGGGAGAGGCAAGATTGAGCAATAGTCAGTGGCACCATTTCCTAAAGTAACTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264399.5
ENST00000395578.3
ENST00000545647.5
3UTR-3UTR CCA 90 bp ACATACAACCATTCACCAGTGAAGTTCTTAGGTACTAGGTCCCATGCTATTGAAGTCAGGAGGTTCTGTTaGCTACCATGGTTTCTGCAA +
Preference number: 2 (lower is better)
Translates to: TYNHSPVKFLGTRSHAIEVRRFC*LPWFLQ
Trigger: TTGCAGAAACCATGGTAGCCAACAGAACCTCCTGAC...TTCAATAGCATGGGACCTAGTACCTAAGAACTTCACTGGTGAATGGTTGTATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264399.5
ENST00000545647.5
3UTR-3UTR TCA 90 bp TCAGTTACTTTAGGAAATGGTGCCACTGACTATTGCTCAATCTTGCCTCTCCCTCAAACGAGAAGGATATaGTTGGAATGGAACAATAGA +
Preference number: 2 (lower is better)
Translates to: SVTLGNGATDYCSILPLPQTRRI*LEWNNR
Trigger: TCTATTGTTCCATTCCAATCATATCCTTCTCGTTTG...AGGGAGAGGCAAGATTGAGCAATAGTCAGTGGCACCATTTCCTAAAGTAACTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264399.5
ENST00000395578.3
ENST00000545647.5
3UTR-3UTR CCA 90 bp AATAATTACCTGACTGGATTGATTGATTCAGTTACTTTAGGAAATGGTGCCACTAATCTTGCCTCTCCCTaGACTCATGTCAGAGGCGTA +
Preference number: 2 (lower is better)
Translates to: NNYLTGLIDSVTLGNGATNLASP*THVRGV
Trigger: TACGCCTCTGACATGAGTCCAGGGAGAGGCAAGATT...AGTGGCACCATTTCCTAAAGTAACTGAATCAATCAATCCAGTCAGGTAATTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264399.5
ENST00000395578.3
ENST00000545647.5
3UTR-3UTR TCA 90 bp AAGCTAAATCACTTTCCCAGAGTCACTCAGTTAGGAAATGGTGGAGTTGGGATTCAAACGAGAAGGATATaGTTGGAATGGAACAATAGA +
Preference number: 2 (lower is better)
Translates to: KLNHFPRVTQLGNGGVGIQTRRI*LEWNNR
Trigger: TCTATTGTTCCATTCCAATCATATCCTTCTCGTTTG...AATCCCAACTCCACCATTTCCTAACTGAGTGACTCTGGGAAAGTGATTTAGCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264399.5
ENST00000545647.5
3UTR-3UTR CCA 90 bp TCAGTTAGGAAATGGTGGAGTTGGGATTATTCAATGGTTCAGTCTCTCATTTCTTTCTGTTGGCTACCATaGTTTCTGCAAACCACCATT +
Preference number: 2 (lower is better)
Translates to: SVRKWWSWDYSMVQSLISFCWLP*FLQTTI
Trigger: AATGGTGGTTTGCAGAAACCATGGTAGCCAACAGAA...AGAAATGAGAGACTGAACCATTGAATAATCCCAACTCCACCATTTCCTAACTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264399.5
ENST00000545647.5
3UTR CAA 90 bp GACACTATAACTCAGAACCATATCCACACCATTCTCCTCTTCCCATaGTGCAGGAATTTCTTTTCCCTAATGGTCTTCCAAAGATATTAT +
Preference number: 2 (lower is better)
Translates to: DTITQNHIHTILLFP*CRNFFSLMVFQRYY
Trigger: ATAATATCTTTGGAAGACCATTAGGGAAAAGAAATTCCTGCACAATGGGAAGAGGAGAATGGTGTGGATATGGTTCTGAGTTATAGTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264399.5
ENST00000395578.3
ENST00000545647.5
ENST00000628926.1
3UTR-3UTR GCA 90 bp AAGCTAAATCACTTTCCCAGAGTCACTCAGTTAGGAAATGGTGGAGTTGGGATTTTTAAGATACCACCATaGTTATATGAAGTTGCTGAG +
Preference number: 2 (lower is better)
Translates to: KLNHFPRVTQLGNGGVGIFKIPP*LYEVAE
Trigger: CTCAGCAACTTCATATAAGCATGGTGGTATCTTAAA...AATCCCAACTCCACCATTTCCTAACTGAGTGACTCTGGGAAAGTGATTTAGCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264399.5
ENST00000545647.5
3UTR-3UTR GCA 90 bp AATAATTACCTGACTGGATTGATTGATTCAGTTACTTTAGGAAATGGTGCCACTACTATTGCTCAATCTTaGCTCTCCCTGGACTCATGT +
Preference number: 2 (lower is better)
Translates to: NNYLTGLIDSVTLGNGATTIAQS*LSLDSC
Trigger: ACATGAGTCCAGGGAGAGGCAAGATTGAGCAATAGT...AGTGGCACCATTTCCTAAAGTAACTGAATCAATCAATCCAGTCAGGTAATTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264399.5
ENST00000395578.3
ENST00000545647.5
3UTR-3UTR TCA 90 bp TCAGTTAGGAAATGGTGGAGTTGGGATTATTCAATGGTTCAGTCTCTCATTTCTCCTGACTGGATTGATTaGTTCAGTTACTTTAGGAAA +
Preference number: 2 (lower is better)
Translates to: SVRKWWSWDYSMVQSLISPDWID*FSYFRK
Trigger: TTTCCTAAAGTAACTGAATCAATCAATCCAGTCAGG...AGAAATGAGAGACTGAACCATTGAATAATCCCAACTCCACCATTTCCTAACTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264399.5
ENST00000545647.5
3UTR-3UTR GCA 90 bp ACATACAACCATTCACCAGTGAAGTTCTTAGGTACTAGGTCCCATGCTATTGAATTTAAGATACCACCATaGTTATATGAAGTTGCTGAG +
Preference number: 2 (lower is better)
Translates to: TYNHSPVKFLGTRSHAIEFKIPP*LYEVAE
Trigger: CTCAGCAACTTCATATAAGCATGGTGGTATCTTAAA...TTCAATAGCATGGGACCTAGTACCTAAGAACTTCACTGGTGAATGGTTGTATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264399.5
ENST00000545647.5
3UTR-3UTR CAA 90 bp GTCAGGAGGTTCTGTTGGCTACCATGGTTTCTGCAAACCACCATTTTAAGATACCATGCTTATATGAAGTaGCTGAGAGCTGGGGAGCTC +
Preference number: 3 (lower is better)
Translates to: VRRFCWLPWFLQTTILRYHAYMK*LRAGEL
Trigger: GAGCTCCCCAGCTCTCAGCAACTTCATATAAGCATG...GTATCTTAAAATGGTGGTTTGCAGAAACCATGGTAGCCAACAGAACCTCCTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264399.5
ENST00000395578.3
ENST00000545647.5
3UTR GCA 72 bp GATTCAGTTACTTTAGGAAATGGTGCCACTGACTATTaGTCAATCTTGCCTCTCCCTGGACTCATGTCAGAG +
Preference number: 3 (lower is better)
Translates to: DSVTLGNGATDY*SILPLPGLMSE
Trigger: CTCTGACATGAGTCCAGGGAGAGGCAAGATTGAGCAATAGTCAGTGGCACCATTTCCTAAAGTAACTGAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264399.5
ENST00000395578.3
ENST00000545647.5
3UTR-3UTR CAA 90 bp ACATACAACCATTCACCAGTGAAGTTCTTAGGTACTAGGTCCCATGCTATTGAAAGTCAGGAGGTTCTGTaGGCTACCATGGTTTCTGCA +
Preference number: 3 (lower is better)
Translates to: TYNHSPVKFLGTRSHAIESQEVL*ATMVSA
Trigger: TGCAGAAACCATGGTAGCCAACAGAACCTCCTGACT...TTCAATAGCATGGGACCTAGTACCTAAGAACTTCACTGGTGAATGGTTGTATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264399.5
ENST00000545647.5
3UTR GCA 72 bp ATGGTTTCTGCAAACCACCATTTTAAGATACCACCATaGTTATATGAAGTTGCTGAGAGCTGGGGAGCTCTC +
Preference number: 3 (lower is better)
Translates to: MVSANHHFKIPP*LYEVAESWGAL
Trigger: GAGAGCTCCCCAGCTCTCAGCAACTTCATATAAGCATGGTGGTATCTTAAAATGGTGGTTTGCAGAAACCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264399.5
ENST00000395578.3
ENST00000545647.5
3UTR CCA 72 bp AAGCAGGTGAAAGTCAGGAGGTTCTGTTGGCTACCATaGTTTCTGCAAACCACCATTTTAAGATACCACCAT +
Preference number: 3 (lower is better)
Translates to: KQVKVRRFCWLP*FLQTTILRYHH
Trigger: ATGGTGGTATCTTAAAATGGTGGTTTGCAGAAACCATGGTAGCCAACAGAACCTCCTGACTTTCACCTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264399.5
ENST00000395578.3
ENST00000545647.5
3UTR-3UTR CAA 90 bp TCAGTTAGGAAATGGTGGAGTTGGGATTATTCAATGGTTCAGTCTCTCATTTCTCATGCTTATATGAAGTaGCTGAGAGCTGGGGAGCTC +
Preference number: 3 (lower is better)
Translates to: SVRKWWSWDYSMVQSLISHAYMK*LRAGEL
Trigger: GAGCTCCCCAGCTCTCAGCAACTTCATATAAGCATG...AGAAATGAGAGACTGAACCATTGAATAATCCCAACTCCACCATTTCCTAACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264399.5
ENST00000545647.5
3UTR CCA 72 bp GCTAAATCACTTTCCCAGAGTCACTCAGTTAGGAAATaGTGGAGTTGGGATTATTCAATGGTTCAGTCTCTC +
Preference number: 3 (lower is better)
Translates to: AKSLSQSHSVRK*WSWDYSMVQSL
Trigger: GAGAGACTGAACCATTGAATAATCCCAACTCCACCATTTCCTAACTGAGTGACTCTGGGAAAGTGATTTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264399.5
ENST00000545647.5
3UTR-3UTR CAA 90 bp AAGCTAAATCACTTTCCCAGAGTCACTCAGTTAGGAAATGGTGGAGTTGGGATTTATCCTACTTATTATTaGGGAGAGTGCAAGGAAGGG +
Preference number: 3 (lower is better)
Translates to: KLNHFPRVTQLGNGGVGIYPTYY*GECKEG
Trigger: CCCTTCCTTGCACTCTCCCAAATAATAAGTAGGATA...AATCCCAACTCCACCATTTCCTAACTGAGTGACTCTGGGAAAGTGATTTAGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264399.5
ENST00000545647.5
3UTR-3UTR CAA 90 bp ACATACAACCATTCACCAGTGAAGTTCTTAGGTACTAGGTCCCATGCTATTGAAATTCTCCTCTTCCCATaGTGCAGGAATTTCTTTTCC +
Preference number: 3 (lower is better)
Translates to: TYNHSPVKFLGTRSHAIEILLFP*CRNFFS
Trigger: GGAAAAGAAATTCCTGCACAATGGGAAGAGGAGAAT...TTCAATAGCATGGGACCTAGTACCTAAGAACTTCACTGGTGAATGGTTGTATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264399.5
ENST00000545647.5
3UTR-3UTR CAA 90 bp AATAATTACCTGACTGGATTGATTGATTCAGTTACTTTAGGAAATGGTGCCACTCATGCTTATATGAAGTaGCTGAGAGCTGGGGAGCTC +
Preference number: 3 (lower is better)
Translates to: NNYLTGLIDSVTLGNGATHAYMK*LRAGEL
Trigger: GAGCTCCCCAGCTCTCAGCAACTTCATATAAGCATG...AGTGGCACCATTTCCTAAAGTAACTGAATCAATCAATCCAGTCAGGTAATTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264399.5
ENST00000395578.3
ENST00000545647.5
3UTR-3UTR CAA 90 bp TCAGTTAGGAAATGGTGGAGTTGGGATTATTCAATGGTTCAGTCTCTCATTTCTATGCACCTTTCTGGATaGGGCTTCACTTATCTAGCT +
Preference number: 3 (lower is better)
Translates to: SVRKWWSWDYSMVQSLISMHLSG*GFTYLA
Trigger: AGCTAGATAAGTGAAGCCCAATCCAGAAAGGTGCAT...AGAAATGAGAGACTGAACCATTGAATAATCCCAACTCCACCATTTCCTAACTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264399.5
ENST00000545647.5
3UTR-3UTR CAA 90 bp TCAGTTAGGAAATGGTGGAGTTGGGATTATTCAATGGTTCAGTCTCTCATTTCTATAGGAGGGATGCTGTaGTCCCTTTTACTTCTGAAA +
Preference number: 3 (lower is better)
Translates to: SVRKWWSWDYSMVQSLISIGGML*SLLLLK
Trigger: TTTCAGAAGTAAAAGGGACAACAGCATCCCTCCTAT...AGAAATGAGAGACTGAACCATTGAATAATCCCAACTCCACCATTTCCTAACTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264399.5
ENST00000545647.5
3UTR CCA 72 bp AAATCACTTTCCCAGAGTCACTCAGTTAGGAAATGGTaGAGTTGGGATTATTCAATGGTTCAGTCTCTCATT +
Preference number: 3 (lower is better)
Translates to: KSLSQSHSVRKW*SWDYSMVQSLI
Trigger: AATGAGAGACTGAACCATTGAATAATCCCAACTCCACCATTTCCTAACTGAGTGACTCTGGGAAAGTGATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264399.5
ENST00000545647.5
CDS-3UTR GCA 90 bp GTTACTTTAGGAAATGGTGCCACTGACTATTGCTCAATCTTGCCTCTCCCTGGAGCAATGGCCACAGTCTaGTTCGACAGCTGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: VTLGNGATDYCSILPLPGAMATV*FDSCSR
Trigger: GCGGGAGCAGCTGTCGAAGCAGACTGTGGCCATTGC...TCCAGGGAGAGGCAAGATTGAGCAATAGTCAGTGGCACCATTTCCTAAAGTAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395578.3
CDS-3UTR CCA 90 bp GTTACTTTAGGAAATGGTGCCACTGACTATTGCTCAATCTTGCCTCTCCCTGGAATAGGTCCGGGTTGTTaGCTCAGCAGACACGCCAGC +
Preference number: 4 (lower is better)
Translates to: VTLGNGATDYCSILPLPGIGPGC*LSRHAS
Trigger: GCTGGCGTGTCTGCTGAGCCAACAACCCGGACCTAT...TCCAGGGAGAGGCAAGATTGAGCAATAGTCAGTGGCACCATTTCCTAAAGTAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395578.3
CDS-3UTR TCA 90 bp GTTACTTTAGGAAATGGTGCCACTGACTATTGCTCAATCTTGCCTCTCCCTGGATCTGGAGCTCCTCTGTaGGTTCAGCAATGGCCACAG +
Preference number: 4 (lower is better)
Translates to: VTLGNGATDYCSILPLPGSGAPL*VQQWPQ
Trigger: CTGTGGCCATTGCTGAACTCACAGAGGAGCTCCAGA...TCCAGGGAGAGGCAAGATTGAGCAATAGTCAGTGGCACCATTTCCTAAAGTAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395578.3
CDS-3UTR GCA 90 bp GTCAGGAGGTTCTGTTGGCTACCATGGTTTCTGCAAACCACCATTTTAAGATACAGCGGGCTTCCTCCCTaGATATGCACCACATCCTGC +
Preference number: 4 (lower is better)
Translates to: VRRFCWLPWFLQTTILRYSGLPP*ICTTSC
Trigger: GCAGGATGTGGTGCATATGCAGGGAGGAAGCCCGCT...GTATCTTAAAATGGTGGTTTGCAGAAACCATGGTAGCCAACAGAACCTCCTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395578.3
CDS-3UTR GCA 90 bp TCAGTTACTTTAGGAAATGGTGCCACTGACTATTGCTCAATCTTGCCTCTCCCTGTCTGCTTCGACAGCTaGTCCCGCAGCTCCTTCAAA +
Preference number: 4 (lower is better)
Translates to: SVTLGNGATDYCSILPLPVCFDS*SRSSFK
Trigger: TTTGAAGGAGCTGCGGGAGCAGCTGTCGAAGCAGAC...AGGGAGAGGCAAGATTGAGCAATAGTCAGTGGCACCATTTCCTAAAGTAACTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395578.3
CDS-3UTR GCA 90 bp GGTGAAAGTCAGGAGGTTCTGTTGGCTACCATGGTTTCTGCAAACCACCATTTTCTTCCTCCCTGCATATaGACCACATCCTGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: GESQEVLLATMVSANHHFLPPCI*TTSCSL
Trigger: CAAGCTGCAGGATGTGGTGCATATGCAGGGAGGAAG...AAAATGGTGGTTTGCAGAAACCATGGTAGCCAACAGAACCTCCTGACTTTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395578.3
CDS-3UTR GCA 90 bp GGTGAAAGTCAGGAGGTTCTGTTGGCTACCATGGTTTCTGCAAACCACCATTTTCCTTTGCTCCCCTCCTaGTATGGAGAGAGACCAATC +
Preference number: 4 (lower is better)
Translates to: GESQEVLLATMVSANHHFPLLPS*YGERPI
Trigger: GATTGGTCTCTCTCCATAGCAGGAGGGGAGCAAAGG...AAAATGGTGGTTTGCAGAAACCATGGTAGCCAACAGAACCTCCTGACTTTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395578.3
CDS-3UTR CCA 90 bp GTCAGGAGGTTCTGTTGGCTACCATGGTTTCTGCAAACCACCATTTTAAGATACCGCAGCTCCTTCAAATaGTACTCCCGCTCCTGGATC +
Preference number: 4 (lower is better)
Translates to: VRRFCWLPWFLQTTILRYRSSFK*YSRSWI
Trigger: GATCCAGGAGCGGGAGTACCATTTGAAGGAGCTGCG...GTATCTTAAAATGGTGGTTTGCAGAAACCATGGTAGCCAACAGAACCTCCTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395578.3
CDS-3UTR CCA 90 bp GGTGAAAGTCAGGAGGTTCTGTTGGCTACCATGGTTTCTGCAAACCACCATTTTAAGAGGCACTTTATCTaGAGAGGCCTGAAGCGGGCT +
Preference number: 4 (lower is better)
Translates to: GESQEVLLATMVSANHHFKRHFI*RGLKRA
Trigger: AGCCCGCTTCAGGCCTCTCCAGATAAAGTGCCTCTT...AAAATGGTGGTTTGCAGAAACCATGGTAGCCAACAGAACCTCCTGACTTTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395578.3
CDS-3UTR TCA 90 bp CCACCATGCTTATATGAAGTTGCTGAGAGCTGGGGAGCTCTCCAAAATTCACCAATTCCACCATGTCTTTaGTCTGCTGAGGATCCAGTC +
Preference number: 4 (lower is better)
Translates to: PPCLYEVAESWGALQNSPIPPCL*SAEDPV
Trigger: GACTGGATCCTCAGCAGATCAAAGACATGGTGGAAT...TGGTGAATTTTGGAGAGCTCCCCAGCTCTCAGCAACTTCATATAAGCATGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395578.3
CDS-3UTR TCA 90 bp GGTGAAAGTCAGGAGGTTCTGTTGGCTACCATGGTTTCTGCAAACCACCATTTTCTCTCTTTGCAAAGGTaGTGGAAGGCTCCGTGCTTT +
Preference number: 4 (lower is better)
Translates to: GESQEVLLATMVSANHHFLSLQR*WKAPCF
Trigger: AAAGCACGGAGCCTTCCATCACCTTTGCAAAGAGAG...AAAATGGTGGTTTGCAGAAACCATGGTAGCCAACAGAACCTCCTGACTTTCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000545647.5
CDS-3UTR GCA 90 bp TGTGTTGGATTATTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCGTCTGCTTCGACAGCTaGTCCCGCAGCTCCTTCAAA +
Preference number: 4 (lower is better)
Translates to: CVGLLILEVLFCRVQAVIVCFDS*SRSSFK
Trigger: TTTGAAGGAGCTGCGGGAGCAGCTGTCGAAGCAGAC...GATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAATAATCCAACACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000628926.1
CDS-3UTR GCA 90 bp TTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCAACTTTTCTTCTAGCGGGCTTCCTCCCTaGATATGCACCACATCCTGC +
Preference number: 4 (lower is better)
Translates to: LILEVLFCRVQAVINFSSSGLPP*ICTTSC
Trigger: GCAGGATGTGGTGCATATGCAGGGAGGAAGCCCGCT...AGAAGAAAAGTTGATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000628926.1
CDS-3UTR GCA 90 bp TTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCAACTTTTCTTCTAGACACGCCAGCCTTTaGTCCCCTCCTGCTATGGAG +
Preference number: 4 (lower is better)
Translates to: LILEVLFCRVQAVINFSSRHASL*SPPAME
Trigger: CTCCATAGCAGGAGGGGAGCAAAGGCTGGCGTGTCT...AGAAGAAAAGTTGATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000628926.1
CDS-3UTR GCA 90 bp GGTGAAAGTCAGGAGGTTCTGTTGGCTACCATGGTTTCTGCAAACCACCATTTTCCCTTGAGCTCTCTTTaGAAAGGTGATGGAAGGCTC +
Preference number: 4 (lower is better)
Translates to: GESQEVLLATMVSANHHFPLSSL*KGDGRL
Trigger: GAGCCTTCCATCACCTTTGCAAAGAGAGCTCAAGGG...AAAATGGTGGTTTGCAGAAACCATGGTAGCCAACAGAACCTCCTGACTTTCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000545647.5
CDS-3UTR CCA 90 bp CCACCATGCTTATATGAAGTTGCTGAGAGCTGGGGAGCTCTCCAAAATTCACCATGGATGCACTTGTTCTaGAGCTCCTCTGTGAGTTCA +
Preference number: 4 (lower is better)
Translates to: PPCLYEVAESWGALQNSPWMHLF*SSSVSS
Trigger: TGAACTCACAGAGGAGCTCCAGAACAAGTGCATCCA...TGGTGAATTTTGGAGAGCTCCCCAGCTCTCAGCAACTTCATATAAGCATGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395578.3
CDS-3UTR CCA 90 bp GGTGAAAGTCAGGAGGTTCTGTTGGCTACCATGGTTTCTGCAAACCACCATTTTCGCAGAATTTGGAGGTaGGTTCATCAAAGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: GESQEVLLATMVSANHHFRRIWR*VHQSCL
Trigger: GAGGCAGCTTTGATGAACCCACCTCCAAATTCTGCG...AAAATGGTGGTTTGCAGAAACCATGGTAGCCAACAGAACCTCCTGACTTTCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000545647.5
CDS-3UTR CCA 90 bp CCACCATGCTTATATGAAGTTGCTGAGAGCTGGGGAGCTCTCCAAAATTCACCAGTCAGGAGGTTCTGTTaGCTACCATGGTTTCTGCAA +
Preference number: 4 (lower is better)
Translates to: PPCLYEVAESWGALQNSPVRRFC*LPWFLQ
Trigger: TTGCAGAAACCATGGTAGCCAACAGAACCTCCTGAC...TGGTGAATTTTGGAGAGCTCCCCAGCTCTCAGCAACTTCATATAAGCATGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000545647.5
CDS-3UTR TCA 90 bp TTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCAACTTTTCTTCTGCAGAGCATCAGTGGTaGGGTTCCCAGAGTGTCCAT +
Preference number: 4 (lower is better)
Translates to: LILEVLFCRVQAVINFSSAEHQW*GSQSVH
Trigger: ATGGACACTCTGGGAACCTCACCACTGATGCTCTGC...AGAAGAAAAGTTGATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000628926.1
CDS-3UTR TCA 90 bp CCACCATGCTTATATGAAGTTGCTGAGAGCTGGGGAGCTCTCCAAAATTCACCAACCTTCTCCTTCAGCTaGATCATTTCCAGAGAGAGT +
Preference number: 4 (lower is better)
Translates to: PPCLYEVAESWGALQNSPTFSFS*IISRES
Trigger: ACTCTCTCTGGAAATGATTCAGCTGAAGGAGAAGGT...TGGTGAATTTTGGAGAGCTCCCCAGCTCTCAGCAACTTCATATAAGCATGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000545647.5
CDS-3UTR TCA 90 bp GTCAGGAGGTTCTGTTGGCTACCATGGTTTCTGCAAACCACCATTTTAAGATACGATCTATGGGTCCCTTaGGCTCTCTTTGCAAAGGTG +
Preference number: 4 (lower is better)
Translates to: VRRFCWLPWFLQTTILRYDLWVP*ALFAKV
Trigger: CACCTTTGCAAAGAGAGCTCAAGGGACCCATAGATC...GTATCTTAAAATGGTGGTTTGCAGAAACCATGGTAGCCAACAGAACCTCCTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000545647.5
CDS-3UTR TCA 90 bp GGTGAAAGTCAGGAGGTTCTGTTGGCTACCATGGTTTCTGCAAACCACCATTTTAGGAAATGGTGCCACTaGCTATTGCTCAATCTTGCC +
Preference number: 4 (lower is better)
Translates to: GESQEVLLATMVSANHHFRKWCH*LLLNLA
Trigger: GGCAAGATTGAGCAATAGTCAGTGGCACCATTTCCT...AAAATGGTGGTTTGCAGAAACCATGGTAGCCAACAGAACCTCCTGACTTTCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000545647.5
CDS-3UTR GCA 90 bp TGTGTTGGATTATTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCCCTTTGCTCCCCTCCTaGTATGGAGAGAGACCAATC +
Preference number: 4 (lower is better)
Translates to: CVGLLILEVLFCRVQAVIPLLPS*YGERPI
Trigger: GATTGGTCTCTCTCCATAGCAGGAGGGGAGCAAAGG...GATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAATAATCCAACACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000628926.1
CDS-3UTR GCA 90 bp TTATTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCAACTTTTCTAGACACGCCAGCCTTTaGTCCCCTCCTGCTATGGAG +
Preference number: 4 (lower is better)
Translates to: LLILEVLFCRVQAVINFSRHASL*SPPAME
Trigger: CTCCATAGCAGGAGGGGAGCAAAGGCTGGCGTGTCT...AGAAAAGTTGATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000628926.1
CDS-3UTR GCA 90 bp GTTACTTTAGGAAATGGTGCCACTGACTATTGCTCAATCTTGCCTCTCCCTGGAAACCATTTCCCATTTTaGTCAGGGACCTCACCAGAC +
Preference number: 4 (lower is better)
Translates to: VTLGNGATDYCSILPLPGNHFPF*SGTSPD
Trigger: GTCTGGTGAGGTCCCTGAGCAAAATGGGAAATGGTT...TCCAGGGAGAGGCAAGATTGAGCAATAGTCAGTGGCACCATTTCCTAAAGTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395578.3
CDS-3UTR CCA 90 bp TTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCAACTTTTCTTCTGCTCCCCTCCTGCTATaGAGAGAGACCAATCCAGAG +
Preference number: 4 (lower is better)
Translates to: LILEVLFCRVQAVINFSSAPLLL*RETNPE
Trigger: CTCTGGATTGGTCTCTCTCCATAGCAGGAGGGGAGC...AGAAGAAAAGTTGATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000628926.1
CDS-3UTR CCA 90 bp TTATTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCAACTTTTCTATAGGTCCGGGTTGTTaGCTCAGCAGACACGCCAGC +
Preference number: 4 (lower is better)
Translates to: LLILEVLFCRVQAVINFSIGPGC*LSRHAS
Trigger: GCTGGCGTGTCTGCTGAGCCAACAACCCGGACCTAT...AGAAAAGTTGATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000628926.1
CDS-3UTR CCA 90 bp GTTACTTTAGGAAATGGTGCCACTGACTATTGCTCAATCTTGCCTCTCCCTGGAGCCAGCACAAAGATATaGTTTCCTGGTTCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: VTLGNGATDYCSILPLPGASTKI*FPGSPC
Trigger: GCAAGGAGAACCAGGAAACCATATCTTTGTGCTGGC...TCCAGGGAGAGGCAAGATTGAGCAATAGTCAGTGGCACCATTTCCTAAAGTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395578.3
CDS-3UTR CCA 90 bp GTCAGGAGGTTCTGTTGGCTACCATGGTTTCTGCAAACCACCATTTTAAGATACAGCAATTTCTCCCCTTaGAACACCTCTAGTCGACCC +
Preference number: 4 (lower is better)
Translates to: VRRFCWLPWFLQTTILRYSNFSP*NTSSRP
Trigger: GGGTCGACTAGAGGTGTTCCAAGGGGAGAAATTGCT...GTATCTTAAAATGGTGGTTTGCAGAAACCATGGTAGCCAACAGAACCTCCTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395578.3
CDS-3UTR CCA 90 bp GGTGAAAGTCAGGAGGTTCTGTTGGCTACCATGGTTTCTGCAAACCACCATTTTCATGCTCCTGCTGCTTaGTGTCAACTATGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: GESQEVLLATMVSANHHFHAPAA*CQLCAS
Trigger: AGAAGCACATAGTTGACACCAAGCAGCAGGAGCATG...AAAATGGTGGTTTGCAGAAACCATGGTAGCCAACAGAACCTCCTGACTTTCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000545647.5
CDS-3UTR CCA 90 bp GTCAGGAGGTTCTGTTGGCTACCATGGTTTCTGCAAACCACCATTTTAAGATACAATCTTGCCTCTCCCTaGACTCATGTCAGAGGCGTA +
Preference number: 4 (lower is better)
Translates to: VRRFCWLPWFLQTTILRYNLASP*THVRGV
Trigger: TACGCCTCTGACATGAGTCCAGGGAGAGGCAAGATT...GTATCTTAAAATGGTGGTTTGCAGAAACCATGGTAGCCAACAGAACCTCCTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000545647.5
CDS-3UTR TCA 90 bp TTATTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCAACTTTTCTGCAGAGCATCAGTGGTaGGGTTCCCAGAGTGTCCAT +
Preference number: 4 (lower is better)
Translates to: LLILEVLFCRVQAVINFSAEHQW*GSQSVH
Trigger: ATGGACACTCTGGGAACCTCACCACTGATGCTCTGC...AGAAAAGTTGATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000628926.1
CDS-3UTR TCA 90 bp GGTGAAAGTCAGGAGGTTCTGTTGGCTACCATGGTTTCTGCAAACCACCATTTTACCTTCTCCTTCAGCTaGATCATTTCCAGAGAGAGT +
Preference number: 4 (lower is better)
Translates to: GESQEVLLATMVSANHHFTFSFS*IISRES
Trigger: ACTCTCTCTGGAAATGATTCAGCTGAAGGAGAAGGT...AAAATGGTGGTTTGCAGAAACCATGGTAGCCAACAGAACCTCCTGACTTTCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000545647.5
CDS-3UTR TCA 90 bp TGTGTTGGATTATTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCCTCTCTTTGCAAAGGTaGTGGAAGGCTCCGTGCTTT +
Preference number: 4 (lower is better)
Translates to: CVGLLILEVLFCRVQAVILSLQR*WKAPCF
Trigger: AAAGCACGGAGCCTTCCATCACCTTTGCAAAGAGAG...GATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAATAATCCAACACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395578.3
ENST00000545647.5
ENST00000628926.1
CDS-3UTR TCA 90 bp AAGCTAAATCACTTTCCCAGAGTCACTCAGTTAGGAAATGGTGGAGTTGGGATTGATCTATGGGTCCCTTaGGCTCTCTTTGCAAAGGTG +
Preference number: 4 (lower is better)
Translates to: KLNHFPRVTQLGNGGVGIDLWVP*ALFAKV
Trigger: CACCTTTGCAAAGAGAGCTCAAGGGACCCATAGATC...AATCCCAACTCCACCATTTCCTAACTGAGTGACTCTGGGAAAGTGATTTAGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545647.5
CDS-3UTR GCA 90 bp TTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCAACTTTTCTTCTCTTCCTCCCTGCATATaGACCACATCCTGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: LILEVLFCRVQAVINFSSLPPCI*TTSCSL
Trigger: CAAGCTGCAGGATGTGGTGCATATGCAGGGAGGAAG...AGAAGAAAAGTTGATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000628926.1
CDS-3UTR GCA 90 bp TGTGTTGGATTATTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCCCCTTGAGCTCTCTTTaGAAAGGTGATGGAAGGCTC +
Preference number: 4 (lower is better)
Translates to: CVGLLILEVLFCRVQAVIPLSSL*KGDGRL
Trigger: GAGCCTTCCATCACCTTTGCAAAGAGAGCTCAAGGG...GATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAATAATCCAACACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395578.3
ENST00000545647.5
ENST00000628926.1
CDS-3UTR GCA 90 bp TGTGTTGGATTATTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCGGTGCCACTGACTATTaGTCAATCTTGCCTCTCCCT +
Preference number: 4 (lower is better)
Translates to: CVGLLILEVLFCRVQAVIGATDY*SILPLP
Trigger: AGGGAGAGGCAAGATTGAGCAATAGTCAGTGGCACC...GATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAATAATCCAACACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000545647.5
CDS-3UTR CCA 90 bp TCAGTTACTTTAGGAAATGGTGCCACTGACTATTGCTCAATCTTGCCTCTCCCTCCCAGAGTGTCCATCTaGGTGCTTAGAATGTTTAGG +
Preference number: 4 (lower is better)
Translates to: SVTLGNGATDYCSILPLPPRVSI*VLRMFR
Trigger: CCTAAACATTCTAAGCACCCAGATGGACACTCTGGG...AGGGAGAGGCAAGATTGAGCAATAGTCAGTGGCACCATTTCCTAAAGTAACTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395578.3
CDS-3UTR CCA 90 bp TTATTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCAACTTTTCTCGCAGCTCCTTCAAATaGTACTCCCGCTCCTGGATC +
Preference number: 4 (lower is better)
Translates to: LLILEVLFCRVQAVINFSRSSFK*YSRSWI
Trigger: GATCCAGGAGCGGGAGTACCATTTGAAGGAGCTGCG...AGAAAAGTTGATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000628926.1
CDS-3UTR CCA 90 bp TGTGTTGGATTATTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCTGCAGCTTGTTCAGCTaGATGCACTTGTTCTGGAGC +
Preference number: 4 (lower is better)
Translates to: CVGLLILEVLFCRVQAVICSLFS*MHLFWS
Trigger: GCTCCAGAACAAGTGCATCCAGCTGAACAAGCTGCA...GATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAATAATCCAACACA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000628926.1
CDS-3UTR CCA 90 bp TTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCAACTTTTCTTCTAAGAGGCACTTTATCTaGAGAGGCCTGAAGCGGGCT +
Preference number: 4 (lower is better)
Translates to: LILEVLFCRVQAVINFSSKRHFI*RGLKRA
Trigger: AGCCCGCTTCAGGCCTCTCCAGATAAAGTGCCTCTT...AGAAGAAAAGTTGATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000628926.1
CDS-3UTR CCA 90 bp TTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCAACTTTTCTTCTCCAGAGGTCTTCCGGTaGACCTCAAGAGGCACTTTA +
Preference number: 4 (lower is better)
Translates to: LILEVLFCRVQAVINFSSPEVFR*TSRGTL
Trigger: TAAAGTGCCTCTTGAGGTCCACCGGAAGACCTCTGG...AGAAGAAAAGTTGATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000628926.1
CDS-3UTR CCA 90 bp TTATTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCAACTTTTCTGCTCCCCTCCTGCTATaGAGAGAGACCAATCCAGAG +
Preference number: 4 (lower is better)
Translates to: LLILEVLFCRVQAVINFSAPLLL*RETNPE
Trigger: CTCTGGATTGGTCTCTCTCCATAGCAGGAGGGGAGC...AGAAAAGTTGATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000628926.1
CDS-3UTR CCA 90 bp TCAGTTACTTTAGGAAATGGTGCCACTGACTATTGCTCAATCTTGCCTCTCCCTCATGCTCCTGCTGCTTaGTGTCAACTATGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: SVTLGNGATDYCSILPLPHAPAA*CQLCAS
Trigger: AGAAGCACATAGTTGACACCAAGCAGCAGGAGCATG...AGGGAGAGGCAAGATTGAGCAATAGTCAGTGGCACCATTTCCTAAAGTAACTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000545647.5
CDS-3UTR CCA 90 bp TGTGTTGGATTATTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCCGCAGAATTTGGAGGTaGGTTCATCAAAGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: CVGLLILEVLFCRVQAVIRRIWR*VHQSCL
Trigger: GAGGCAGCTTTGATGAACCCACCTCCAAATTCTGCG...GATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAATAATCCAACACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395578.3
ENST00000545647.5
ENST00000628926.1
CDS-3UTR CCA 90 bp GGTGAAAGTCAGGAGGTTCTGTTGGCTACCATGGTTTCTGCAAACCACCATTTTAAGCAACGCAGAATTTaGAGGTGGGTTCATCAAAGC +
Preference number: 4 (lower is better)
Translates to: GESQEVLLATMVSANHHFKQRRI*RWVHQS
Trigger: GCTTTGATGAACCCACCTCCAAATTCTGCGTTGCTT...AAAATGGTGGTTTGCAGAAACCATGGTAGCCAACAGAACCTCCTGACTTTCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000545647.5
CDS-3UTR CCA 90 bp TCAGTTACTTTAGGAAATGGTGCCACTGACTATTGCTCAATCTTGCCTCTCCCTGAAGTTGCTGAGAGCTaGGGAGCTCTCCAAAATTCA +
Preference number: 4 (lower is better)
Translates to: SVTLGNGATDYCSILPLPEVAES*GALQNS
Trigger: TGAATTTTGGAGAGCTCCCCAGCTCTCAGCAACTTC...AGGGAGAGGCAAGATTGAGCAATAGTCAGTGGCACCATTTCCTAAAGTAACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000545647.5
CDS-3UTR CCA 90 bp GTTACTTTAGGAAATGGTGCCACTGACTATTGCTCAATCTTGCCTCTCCCTGGAATTATGAGTGGGGACTaGGTAGAGGTTCCTTTTGAC +
Preference number: 4 (lower is better)
Translates to: VTLGNGATDYCSILPLPGIMSGD*VEVPFD
Trigger: GTCAAAAGGAACCTCTACCCAGTCCCCACTCATAAT...TCCAGGGAGAGGCAAGATTGAGCAATAGTCAGTGGCACCATTTCCTAAAGTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545647.5
CDS-3UTR GCA 90 bp TGTGTTGGATTATTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCATATGCACCACATCCTaGAGCTTGTTCAGCTGGATG +
Preference number: 4 (lower is better)
Translates to: CVGLLILEVLFCRVQAVIICTTS*SLFSWM
Trigger: CATCCAGCTGAACAAGCTGCAGGATGTGGTGCATAT...GATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAATAATCCAACACA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000628926.1
CDS-3UTR GCA 90 bp GTTACTTTAGGAAATGGTGCCACTGACTATTGCTCAATCTTGCCTCTCCCTGGATGGGTTCATCAAAGCTaGCTCTGTCCCTTAATATAC +
Preference number: 4 (lower is better)
Translates to: VTLGNGATDYCSILPLPGWVHQS*LCPLIY
Trigger: GTATATTAAGGGACAGAGGCAGCTTTGATGAACCCA...TCCAGGGAGAGGCAAGATTGAGCAATAGTCAGTGGCACCATTTCCTAAAGTAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000545647.5
CDS-3UTR GCA 90 bp CATTTTAAGATACCACCATGCTTATATGAAGTTGCTGAGAGCTGGGGAGCTCTCCTTTCTGTTGGATTTTaGCTGCAAAGCCTCCGAATC +
Preference number: 4 (lower is better)
Translates to: HFKIPPCLYEVAESWGALLSVGF*LQSLRI
Trigger: GATTCGGAGGCTTTGCAGGCAAAATCCAACAGAAAG...GAGAGCTCCCCAGCTCTCAGCAACTTCATATAAGCATGGTGGTATCTTAAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000545647.5
CDS-3UTR GCA 90 bp GGTGAAAGTCAGGAGGTTCTGTTGGCTACCATGGTTTCTGCAAACCACCATTTTCTCCTCTTCCCATTGTaGAGGAATTTCTTTTCCCTA +
Preference number: 4 (lower is better)
Translates to: GESQEVLLATMVSANHHFLLFPL*RNFFSL
Trigger: TAGGGAAAAGAAATTCCTGCACAATGGGAAGAGGAG...AAAATGGTGGTTTGCAGAAACCATGGTAGCCAACAGAACCTCCTGACTTTCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000545647.5
CDS-3UTR GCA 90 bp TCAGTTACTTTAGGAAATGGTGCCACTGACTATTGCTCAATCTTGCCTCTCCCTACTATTGCTCAATCTTaGCTCTCCCTGGACTCATGT +
Preference number: 4 (lower is better)
Translates to: SVTLGNGATDYCSILPLPTIAQS*LSLDSC
Trigger: ACATGAGTCCAGGGAGAGGCAAGATTGAGCAATAGT...AGGGAGAGGCAAGATTGAGCAATAGTCAGTGGCACCATTTCCTAAAGTAACTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000545647.5
CDS-3UTR GCA 90 bp TTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCAACTTTTCTTCTGGTGCCACTGACTATTaGTCAATCTTGCCTCTCCCT +
Preference number: 4 (lower is better)
Translates to: LILEVLFCRVQAVINFSSGATDY*SILPLP
Trigger: AGGGAGAGGCAAGATTGAGCAATAGTCAGTGGCACC...AGAAGAAAAGTTGATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000545647.5
CDS-3UTR CCA 90 bp TTATTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCAACTTTTCTCCAGAGGTCTTCCGGTaGACCTCAAGAGGCACTTTA +
Preference number: 4 (lower is better)
Translates to: LLILEVLFCRVQAVINFSPEVFR*TSRGTL
Trigger: TAAAGTGCCTCTTGAGGTCCACCGGAAGACCTCTGG...AGAAAAGTTGATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000628926.1
CDS-3UTR CCA 90 bp TGTGTTGGATTATTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCGCCAGCACAAAGATATaGTTTCCTGGTTCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: CVGLLILEVLFCRVQAVIASTKI*FPGSPC
Trigger: GCAAGGAGAACCAGGAAACCATATCTTTGTGCTGGC...GATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAATAATCCAACACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000628926.1
CDS-3UTR CCA 90 bp GTTACTTTAGGAAATGGTGCCACTGACTATTGCTCAATCTTGCCTCTCCCTGGATGTTCATCTCTAGCTTaGGCTGTCCTCCTCATTATA +
Preference number: 4 (lower is better)
Translates to: VTLGNGATDYCSILPLPGCSSLA*AVLLII
Trigger: TATAATGAGGAGGACAGCCCAAGCTAGAGATGAACA...TCCAGGGAGAGGCAAGATTGAGCAATAGTCAGTGGCACCATTTCCTAAAGTAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395578.3
CDS-3UTR CCA 90 bp TGTGTTGGATTATTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCCATGCTCCTGCTGCTTaGTGTCAACTATGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: CVGLLILEVLFCRVQAVIHAPAA*CQLCAS
Trigger: AGAAGCACATAGTTGACACCAAGCAGCAGGAGCATG...GATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAATAATCCAACACA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395578.3
ENST00000545647.5
ENST00000628926.1
CDS-3UTR CCA 90 bp GTTACTTTAGGAAATGGTGCCACTGACTATTGCTCAATCTTGCCTCTCCCTGGATTCTGTTGGCTACCATaGTTTCTGCAAACCACCATT +
Preference number: 4 (lower is better)
Translates to: VTLGNGATDYCSILPLPGFCWLP*FLQTTI
Trigger: AATGGTGGTTTGCAGAAACCATGGTAGCCAACAGAA...TCCAGGGAGAGGCAAGATTGAGCAATAGTCAGTGGCACCATTTCCTAAAGTAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000545647.5
CDS-3UTR CCA 90 bp GTTACTTTAGGAAATGGTGCCACTGACTATTGCTCAATCTTGCCTCTCCCTGGAAAGGATGCACCTTTCTaGATTGGGCTTCACTTATCT +
Preference number: 4 (lower is better)
Translates to: VTLGNGATDYCSILPLPGKDAPF*IGLHLS
Trigger: AGATAAGTGAAGCCCAATCCAGAAAGGTGCATCCTT...TCCAGGGAGAGGCAAGATTGAGCAATAGTCAGTGGCACCATTTCCTAAAGTAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545647.5
CDS-3UTR CCA 90 bp GTCAGGAGGTTCTGTTGGCTACCATGGTTTCTGCAAACCACCATTTTAAGATACCCGTCTATGCAGCAATaGTTATTTCACAGATACCGG +
Preference number: 4 (lower is better)
Translates to: VRRFCWLPWFLQTTILRYPSMQQ*LFHRYR
Trigger: CCGGTATCTGTGAAATAACCATTGCTGCATAGACGG...GTATCTTAAAATGGTGGTTTGCAGAAACCATGGTAGCCAACAGAACCTCCTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545647.5
CDS-3UTR CCA 90 bp GTTACTTTAGGAAATGGTGCCACTGACTATTGCTCAATCTTGCCTCTCCCTGGATTTATCTGTCCAAAGTaGAGGACCTTTCCTTTTGCC +
Preference number: 4 (lower is better)
Translates to: VTLGNGATDYCSILPLPGFICPK*RTFPFA
Trigger: GGCAAAAGGAAAGGTCCTCCACTTTGGACAGATAAA...TCCAGGGAGAGGCAAGATTGAGCAATAGTCAGTGGCACCATTTCCTAAAGTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545647.5
CDS-3UTR TCA 90 bp TCAGTTACTTTAGGAAATGGTGCCACTGACTATTGCTCAATCTTGCCTCTCCCTATGTCTTTGATCTGCTaGGGATCCAGTCTTTTCAGA +
Preference number: 4 (lower is better)
Translates to: SVTLGNGATDYCSILPLPMSLIC*GSSLFR
Trigger: TCTGAAAAGACTGGATCCTCAGCAGATCAAAGACAT...AGGGAGAGGCAAGATTGAGCAATAGTCAGTGGCACCATTTCCTAAAGTAACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395578.3
CDS-3UTR TCA 90 bp TTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCAACTTTTCTTCTATTCCACCATGTCTTTaGTCTGCTGAGGATCCAGTC +
Preference number: 4 (lower is better)
Translates to: LILEVLFCRVQAVINFSSIPPCL*SAEDPV
Trigger: GACTGGATCCTCAGCAGATCAAAGACATGGTGGAAT...AGAAGAAAAGTTGATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000628926.1
CDS-3UTR TCA 90 bp GTTACTTTAGGAAATGGTGCCACTGACTATTGCTCAATCTTGCCTCTCCCTGGAGCAAGGATACACTTCTaGGGAAGTTTCTGTATTGTT +
Preference number: 4 (lower is better)
Translates to: VTLGNGATDYCSILPLPGARIHF*GSFCIV
Trigger: AACAATACAGAAACTTCCTCAGAAGTGTATCCTTGC...TCCAGGGAGAGGCAAGATTGAGCAATAGTCAGTGGCACCATTTCCTAAAGTAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395578.3
CDS-3UTR TCA 90 bp GTTACTTTAGGAAATGGTGCCACTGACTATTGCTCAATCTTGCCTCTCCCTGGAAGCAATAATGTTAGCTaGCCTGACATCATCACTGAT +
Preference number: 4 (lower is better)
Translates to: VTLGNGATDYCSILPLPGSNNVS*PDIITD
Trigger: ATCAGTGATGATGTCAGGTCAGCTAACATTATTGCT...TCCAGGGAGAGGCAAGATTGAGCAATAGTCAGTGGCACCATTTCCTAAAGTAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000545647.5
CDS-3UTR TCA 90 bp TGTGTTGGATTATTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCACCTTCTCCTTCAGCTaGATCATTTCCAGAGAGAGT +
Preference number: 4 (lower is better)
Translates to: CVGLLILEVLFCRVQAVITFSFS*IISRES
Trigger: ACTCTCTCTGGAAATGATTCAGCTGAAGGAGAAGGT...GATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAATAATCCAACACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395578.3
ENST00000545647.5
ENST00000628926.1
CDS-3UTR TCA 90 bp TTATTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCAACTTTTCTCTCTCTTTGCAAAGGTaGTGGAAGGCTCCGTGCTTT +
Preference number: 4 (lower is better)
Translates to: LLILEVLFCRVQAVINFSLSLQR*WKAPCF
Trigger: AAAGCACGGAGCCTTCCATCACCTTTGCAAAGAGAG...AGAAAAGTTGATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395578.3
ENST00000545647.5
ENST00000628926.1
CDS-3UTR TCA 90 bp TTATTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCAACTTTTCTGATCTATGGGTCCCTTaGGCTCTCTTTGCAAAGGTG +
Preference number: 4 (lower is better)
Translates to: LLILEVLFCRVQAVINFSDLWVP*ALFAKV
Trigger: CACCTTTGCAAAGAGAGCTCAAGGGACCCATAGATC...AGAAAAGTTGATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395578.3
ENST00000545647.5
ENST00000628926.1
CDS-3UTR TCA 90 bp GGAAGGGATAGGAGGGATGCTGTTGTCCCTTTTACTTCTGAAATCCTATCACTTAGGAGGGTAAGGGAATaGTCATGGTCAATACATACA +
Preference number: 4 (lower is better)
Translates to: GRDRRDAVVPFTSEILSLRRVRE*SWSIHT
Trigger: TGTATGTATTGACCATGATCATTCCCTTACCCTCCT...AAGTGATAGGATTTCAGAAGTAAAAGGGACAACAGCATCCCTCCTATCCCTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545647.5
CDS-3UTR TCA 90 bp GTTACTTTAGGAAATGGTGCCACTGACTATTGCTCAATCTTGCCTCTCCCTGGACTCTGCCTTTTTCTATaGATGAGAAAGCTAGTACTC +
Preference number: 4 (lower is better)
Translates to: VTLGNGATDYCSILPLPGLCLFL*MRKLVL
Trigger: GAGTACTAGCTTTCTCATTCATAGAAAAAGGCAGAG...TCCAGGGAGAGGCAAGATTGAGCAATAGTCAGTGGCACCATTTCCTAAAGTAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545647.5
CDS-3UTR GCA 90 bp TTATTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCAACTTTTCTGCTTGTTCAGCTGGATaGACTTGTTCTGGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: LLILEVLFCRVQAVINFSACSAG*TCSGAP
Trigger: AGGAGCTCCAGAACAAGTGCATCCAGCTGAACAAGC...AGAAAAGTTGATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000628926.1
CDS-3UTR GCA 90 bp GGTGAAAGTCAGGAGGTTCTGTTGGCTACCATGGTTTCTGCAAACCACCATTTTCCTTCAAGGTATTTTTaGAGCTCTTCAAATGTACCG +
Preference number: 4 (lower is better)
Translates to: GESQEVLLATMVSANHHFPSRYF*SSSNVP
Trigger: CGGTACATTTGAAGAGCTGCAAAAATACCTTGAAGG...AAAATGGTGGTTTGCAGAAACCATGGTAGCCAACAGAACCTCCTGACTTTCACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000545647.5
CDS-3UTR GCA 90 bp TCAGTTACTTTAGGAAATGGTGCCACTGACTATTGCTCAATCTTGCCTCTCCCTATCACGGTTCAGGTTTaGCACATATCCTTCAAGGTA +
Preference number: 4 (lower is better)
Translates to: SVTLGNGATDYCSILPLPITVQV*HISFKV
Trigger: TACCTTGAAGGATATGTGGCAAACCTGAACCGTGAT...AGGGAGAGGCAAGATTGAGCAATAGTCAGTGGCACCATTTCCTAAAGTAACTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000545647.5
CDS-3UTR GCA 90 bp CATTTTAAGATACCACCATGCTTATATGAAGTTGCTGAGAGCTGGGGAGCTCTCATCACGGTTCAGGTTTaGCACATATCCTTCAAGGTA +
Preference number: 4 (lower is better)
Translates to: HFKIPPCLYEVAESWGALITVQV*HISFKV
Trigger: TACCTTGAAGGATATGTGGCAAACCTGAACCGTGAT...GAGAGCTCCCCAGCTCTCAGCAACTTCATATAAGCATGGTGGTATCTTAAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000545647.5
CDS-3UTR GCA 90 bp TGTGTTGGATTATTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCACCAACGCCCAGTGTTaGAATAATCTCAAGGTTCTG +
Preference number: 4 (lower is better)
Translates to: CVGLLILEVLFCRVQAVITNAQC*NNLKVL
Trigger: CAGAACCTTGAGATTATTGCAACACTGGGCGTTGGT...GATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAATAATCCAACACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000545647.5
CDS-3UTR GCA 90 bp GGTGAAAGTCAGGAGGTTCTGTTGGCTACCATGGTTTCTGCAAACCACCATTTTATGCAGGTAATCAAATaGTTCTGTCACACAAGCAAC +
Preference number: 4 (lower is better)
Translates to: GESQEVLLATMVSANHHFMQVIK*FCHTSN
Trigger: GTTGCTTGTGTGACAGAAGCATTTGATTACCTGCAT...AAAATGGTGGTTTGCAGAAACCATGGTAGCCAACAGAACCTCCTGACTTTCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000545647.5
CDS-3UTR GCA 90 bp GTTACTTTAGGAAATGGTGCCACTGACTATTGCTCAATCTTGCCTCTCCCTGGAATGCAGGTAATCAAATaGTTCTGTCACACAAGCAAC +
Preference number: 4 (lower is better)
Translates to: VTLGNGATDYCSILPLPGMQVIK*FCHTSN
Trigger: GTTGCTTGTGTGACAGAAGCATTTGATTACCTGCAT...TCCAGGGAGAGGCAAGATTGAGCAATAGTCAGTGGCACCATTTCCTAAAGTAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000545647.5
CDS-3UTR GCA 90 bp TTATTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCAACTTTTCTCCCTTGAGCTCTCTTTaGAAAGGTGATGGAAGGCTC +
Preference number: 4 (lower is better)
Translates to: LLILEVLFCRVQAVINFSPLSSL*KGDGRL
Trigger: GAGCCTTCCATCACCTTTGCAAAGAGAGCTCAAGGG...AGAAAAGTTGATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395578.3
ENST00000545647.5
ENST00000628926.1
CDS-3UTR CCA 90 bp TTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCAACTTTTCTTCTCCCAGAGTGTCCATCTaGGTGCTTAGAATGTTTAGG +
Preference number: 4 (lower is better)
Translates to: LILEVLFCRVQAVINFSSPRVSI*VLRMFR
Trigger: CCTAAACATTCTAAGCACCCAGATGGACACTCTGGG...AGAAGAAAAGTTGATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000628926.1
CDS-3UTR CCA 90 bp TTATTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCAACTTTTCTAGCAATTTCTCCCCTTaGAACACCTCTAGTCGACCC +
Preference number: 4 (lower is better)
Translates to: LLILEVLFCRVQAVINFSSNFSP*NTSSRP
Trigger: GGGTCGACTAGAGGTGTTCCAAGGGGAGAAATTGCT...AGAAAAGTTGATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000628926.1
CDS-3UTR CCA 90 bp GTTACTTTAGGAAATGGTGCCACTGACTATTGCTCAATCTTGCCTCTCCCTGGATGTTTTTATCAGCTGTaGTTGATCATGGCCTTCTGT +
Preference number: 4 (lower is better)
Translates to: VTLGNGATDYCSILPLPGCFYQL*LIMAFC
Trigger: ACAGAAGGCCATGATCAACCACAGCTGATAAAAACA...TCCAGGGAGAGGCAAGATTGAGCAATAGTCAGTGGCACCATTTCCTAAAGTAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000545647.5
CDS-3UTR CCA 90 bp CCACCATGCTTATATGAAGTTGCTGAGAGCTGGGGAGCTCTCCAAAATTCACCAAATGTACCGACAGTTTaGTTGAATGTTTCTCGATCT +
Preference number: 4 (lower is better)
Translates to: PPCLYEVAESWGALQNSPNVPTV*LNVSRS
Trigger: AGATCGAGAAACATTCAACCAAACTGTCGGTACATT...TGGTGAATTTTGGAGAGCTCCCCAGCTCTCAGCAACTTCATATAAGCATGGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000545647.5
CDS-3UTR CCA 90 bp AAGCTAAATCACTTTCCCAGAGTCACTCAGTTAGGAAATGGTGGAGTTGGGATTAAGCAACGCAGAATTTaGAGGTGGGTTCATCAAAGC +
Preference number: 4 (lower is better)
Translates to: KLNHFPRVTQLGNGGVGIKQRRI*RWVHQS
Trigger: GCTTTGATGAACCCACCTCCAAATTCTGCGTTGCTT...AATCCCAACTCCACCATTTCCTAACTGAGTGACTCTGGGAAAGTGATTTAGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545647.5
CDS-3UTR CCA 90 bp GGAAGGGATAGGAGGGATGCTGTTGTCCCTTTTACTTCTGAAATCCTATCACTTTTCTGTTGGCTACCATaGTTTCTGCAAACCACCATT +
Preference number: 4 (lower is better)
Translates to: GRDRRDAVVPFTSEILSLFCWLP*FLQTTI
Trigger: AATGGTGGTTTGCAGAAACCATGGTAGCCAACAGAA...AAGTGATAGGATTTCAGAAGTAAAAGGGACAACAGCATCCCTCCTATCCCTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545647.5
CDS-3UTR CCA 90 bp TTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCAACTTTTCTTCTGTCAGGAGGTTCTGTTaGCTACCATGGTTTCTGCAA +
Preference number: 4 (lower is better)
Translates to: LILEVLFCRVQAVINFSSVRRFC*LPWFLQ
Trigger: TTGCAGAAACCATGGTAGCCAACAGAACCTCCTGAC...AGAAGAAAAGTTGATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000545647.5
CDS-3UTR CCA 90 bp TCAGTTAGGAAATGGTGGAGTTGGGATTATTCAATGGTTCAGTCTCTCATTTCTAATCTTGCCTCTCCCTaGACTCATGTCAGAGGCGTA +
Preference number: 4 (lower is better)
Translates to: SVRKWWSWDYSMVQSLISNLASP*THVRGV
Trigger: TACGCCTCTGACATGAGTCCAGGGAGAGGCAAGATT...AGAAATGAGAGACTGAACCATTGAATAATCCCAACTCCACCATTTCCTAACTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545647.5
CDS-3UTR CCA 90 bp TCAGTTACTTTAGGAAATGGTGCCACTGACTATTGCTCAATCTTGCCTCTCCCTGCTTCTCATTCATTTTaGAAGGAGGGTAAGGGAATG +
Preference number: 4 (lower is better)
Translates to: SVTLGNGATDYCSILPLPASHSF*KEGKGM
Trigger: CATTCCCTTACCCTCCTTCCAAAATGAATGAGAAGC...AGGGAGAGGCAAGATTGAGCAATAGTCAGTGGCACCATTTCCTAAAGTAACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545647.5
CDS-3UTR CCA 90 bp TCAGTTACTTTAGGAAATGGTGCCACTGACTATTGCTCAATCTTGCCTCTCCCTTCAAACAGAATTGCATaGGACTCTACTGGTAGAAGC +
Preference number: 4 (lower is better)
Translates to: SVTLGNGATDYCSILPLPSNRIA*DSTGRS
Trigger: GCTTCTACCAGTAGAGTCCCATGCAATTCTGTTTGA...AGGGAGAGGCAAGATTGAGCAATAGTCAGTGGCACCATTTCCTAAAGTAACTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545647.5
3UTR CAA 72 bp TTCAGGTTAAAAGCAGGTGAAAGTCAGGAGGTTCTGTaGGCTACCATGGTTTCTGCAAACCACCATTTTAAG +
Preference number: 4 (lower is better)
Translates to: FRLKAGESQEVL*ATMVSANHHFK
Trigger: CTTAAAATGGTGGTTTGCAGAAACCATGGTAGCCAACAGAACCTCCTGACTTTCACCTGCTTTTAACCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264399.5
ENST00000395578.3
ENST00000545647.5
CDS-3UTR TCA 90 bp TGTGTTGGATTATTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCATGTCTTTGATCTGCTaGGGATCCAGTCTTTTCAGA +
Preference number: 4 (lower is better)
Translates to: CVGLLILEVLFCRVQAVIMSLIC*GSSLFR
Trigger: TCTGAAAAGACTGGATCCTCAGCAGATCAAAGACAT...GATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAATAATCCAACACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000628926.1
CDS-3UTR TCA 90 bp GTTACTTTAGGAAATGGTGCCACTGACTATTGCTCAATCTTGCCTCTCCCTGGACCTGACTGGATTGATTaGTTCAGTTACTTTAGGAAA +
Preference number: 4 (lower is better)
Translates to: VTLGNGATDYCSILPLPGPDWID*FSYFRK
Trigger: TTTCCTAAAGTAACTGAATCAATCAATCCAGTCAGG...TCCAGGGAGAGGCAAGATTGAGCAATAGTCAGTGGCACCATTTCCTAAAGTAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000545647.5
CDS-3UTR TCA 90 bp CATTTTAAGATACCACCATGCTTATATGAAGTTGCTGAGAGCTGGGGAGCTCTCCTATTAACTCAGCAGTaGCTACAGTGCATCAACATT +
Preference number: 4 (lower is better)
Translates to: HFKIPPCLYEVAESWGALLLTQQ*LQCINI
Trigger: AATGTTGATGCACTGTAGTCACTGCTGAGTTAATAG...GAGAGCTCCCCAGCTCTCAGCAACTTCATATAAGCATGGTGGTATCTTAAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000545647.5
CDS-3UTR TCA 90 bp ACATACAACCATTCACCAGTGAAGTTCTTAGGTACTAGGTCCCATGCTATTGAAGGGAGGATAACACATTaGCATGGTCAATCACAGGAA +
Preference number: 4 (lower is better)
Translates to: TYNHSPVKFLGTRSHAIEGRITH*HGQSQE
Trigger: TTCCTGTGATTGACCATGTCAATGTGTTATCCTCCC...TTCAATAGCATGGGACCTAGTACCTAAGAACTTCACTGGTGAATGGTTGTATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545647.5
CDS-3UTR GCA 90 bp TTATTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCAACTTTTCTATATGCACCACATCCTaGAGCTTGTTCAGCTGGATG +
Preference number: 4 (lower is better)
Translates to: LLILEVLFCRVQAVINFSICTTS*SLFSWM
Trigger: CATCCAGCTGAACAAGCTGCAGGATGTGGTGCATAT...AGAAAAGTTGATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000628926.1
CDS-3UTR GCA 90 bp CCACCATGCTTATATGAAGTTGCTGAGAGCTGGGGAGCTCTCCAAAATTCACCAAAGTATTCTCCTTTCTaGAGTGTTTTTATCAGCTGT +
Preference number: 4 (lower is better)
Translates to: PPCLYEVAESWGALQNSPKYSPF*SVFISC
Trigger: ACAGCTGATAAAAACACTGCAGAAAGGAGAATACTT...TGGTGAATTTTGGAGAGCTCCCCAGCTCTCAGCAACTTCATATAAGCATGGTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000545647.5
CDS-3UTR GCA 90 bp GTTACTTTAGGAAATGGTGCCACTGACTATTGCTCAATCTTGCCTCTCCCTGGAATCTATAACCAGGCATaGAACATCATTTTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: VTLGNGATDYCSILPLPGIYNQA*NIIFFS
Trigger: GCTGAAGAAAATGATGTTGCATGCCTGGTTATAGAT...TCCAGGGAGAGGCAAGATTGAGCAATAGTCAGTGGCACCATTTCCTAAAGTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000545647.5
CDS-3UTR GCA 90 bp GTCAGGAGGTTCTGTTGGCTACCATGGTTTCTGCAAACCACCATTTTAAGATACCCTTCAAGGTATTTTTaGAGCTCTTCAAATGTACCG +
Preference number: 4 (lower is better)
Translates to: VRRFCWLPWFLQTTILRYPSRYF*SSSNVP
Trigger: CGGTACATTTGAAGAGCTGCAAAAATACCTTGAAGG...GTATCTTAAAATGGTGGTTTGCAGAAACCATGGTAGCCAACAGAACCTCCTGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000545647.5
CDS-3UTR GCA 90 bp ACATACAACCATTCACCAGTGAAGTTCTTAGGTACTAGGTCCCATGCTATTGAAACCAACGCCCAGTGTTaGAATAATCTCAAGGTTCTG +
Preference number: 4 (lower is better)
Translates to: TYNHSPVKFLGTRSHAIETNAQC*NNLKVL
Trigger: CAGAACCTTGAGATTATTGCAACACTGGGCGTTGGT...TTCAATAGCATGGGACCTAGTACCTAAGAACTTCACTGGTGAATGGTTGTATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545647.5
CDS-3UTR GCA 90 bp TGTGTTGGATTATTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCTGGGTTCATCAAAGCTaGCTCTGTCCCTTAATATAC +
Preference number: 4 (lower is better)
Translates to: CVGLLILEVLFCRVQAVIWVHQS*LCPLIY
Trigger: GTATATTAAGGGACAGAGGCAGCTTTGATGAACCCA...GATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAATAATCCAACACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395578.3
ENST00000545647.5
ENST00000628926.1
CDS-3UTR CCA 90 bp TGTGTTGGATTATTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCTGTTCATCTCTAGCTTaGGCTGTCCTCCTCATTATA +
Preference number: 4 (lower is better)
Translates to: CVGLLILEVLFCRVQAVICSSLA*AVLLII
Trigger: TATAATGAGGAGGACAGCCCAAGCTAGAGATGAACA...GATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAATAATCCAACACA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000628926.1
CDS-3UTR CCA 90 bp TCAGTTACTTTAGGAAATGGTGCCACTGACTATTGCTCAATCTTGCCTCTCCCTATCCTACTTATTATTTaGGAGAGTGCAAGGAAGGGA +
Preference number: 4 (lower is better)
Translates to: SVTLGNGATDYCSILPLPILLII*ESARKG
Trigger: TCCCTTCCTTGCACTCTCCCAAATAATAAGTAGGAT...AGGGAGAGGCAAGATTGAGCAATAGTCAGTGGCACCATTTCCTAAAGTAACTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545647.5
CDS-3UTR TCA 90 bp TCAGTTACTTTAGGAAATGGTGCCACTGACTATTGCTCAATCTTGCCTCTCCCTATGTTTAGGTTTCACTaGACCATTTCCCATTTTGCT +
Preference number: 4 (lower is better)
Translates to: SVTLGNGATDYCSILPLPMFRFH*TISHFA
Trigger: AGCAAAATGGGAAATGGTTCAGTGAAACCTAAACAT...AGGGAGAGGCAAGATTGAGCAATAGTCAGTGGCACCATTTCCTAAAGTAACTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395578.3
CDS-3UTR TCA 90 bp AAGCTAAATCACTTTCCCAGAGTCACTCAGTTAGGAAATGGTGGAGTTGGGATTAATGTGTTGGATTATTaGTCCTTGAGGTCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: KLNHFPRVTQLGNGGVGINVLDY*SLRSSS
Trigger: AGAAGAGGACCTCAAGGATCAATAATCCAACACATT...AATCCCAACTCCACCATTTCCTAACTGAGTGACTCTGGGAAAGTGATTTAGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545647.5
CDS-3UTR TCA 90 bp TGTGTTGGATTATTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCAATGTGTTGGATTATTaGTCCTTGAGGTCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: CVGLLILEVLFCRVQAVINVLDY*SLRSSS
Trigger: AGAAGAGGACCTCAAGGATCAATAATCCAACACATT...GATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAATAATCCAACACA
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395578.3
ENST00000545647.5
ENST00000628926.1
CDS-3UTR TCA 90 bp AAGCTAAATCACTTTCCCAGAGTCACTCAGTTAGGAAATGGTGGAGTTGGGATTCTATTAACTCAGCAGTaGCTACAGTGCATCAACATT +
Preference number: 4 (lower is better)
Translates to: KLNHFPRVTQLGNGGVGILLTQQ*LQCINI
Trigger: AATGTTGATGCACTGTAGTCACTGCTGAGTTAATAG...AATCCCAACTCCACCATTTCCTAACTGAGTGACTCTGGGAAAGTGATTTAGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545647.5
CDS-3UTR GCA 90 bp TTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCAACTTTTCTTCTGAGTGTCCATCTGGGTaGTTAGAATGTTTAGGTTTC +
Preference number: 4 (lower is better)
Translates to: LILEVLFCRVQAVINFSSECPSG*LECLGF
Trigger: GAAACCTAAACATTCTAAGCACCCAGATGGACACTC...AGAAGAAAAGTTGATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000628926.1
CDS-3UTR GCA 90 bp GTCAGGAGGTTCTGTTGGCTACCATGGTTTCTGCAAACCACCATTTTAAGATACATCTATAACCAGGCATaGAACATCATTTTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: VRRFCWLPWFLQTTILRYIYNQA*NIIFFS
Trigger: GCTGAAGAAAATGATGTTGCATGCCTGGTTATAGAT...GTATCTTAAAATGGTGGTTTGCAGAAACCATGGTAGCCAACAGAACCTCCTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000545647.5
CDS-3UTR GCA 90 bp TCAGTTACTTTAGGAAATGGTGCCACTGACTATTGCTCAATCTTGCCTCTCCCTTTGGTGTCAACTATGTaGTTCTTCCTTATACACTTC +
Preference number: 4 (lower is better)
Translates to: SVTLGNGATDYCSILPLPLVSTM*FFLIHF
Trigger: GAAGTGTATAAGGAAGAAGCACATAGTTGACACCAA...AGGGAGAGGCAAGATTGAGCAATAGTCAGTGGCACCATTTCCTAAAGTAACTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000545647.5
CDS-3UTR GCA 90 bp TTATTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCAACTTTTCTCTTTCTGTTGGATTTTaGCTGCAAAGCCTCCGAATC +
Preference number: 4 (lower is better)
Translates to: LLILEVLFCRVQAVINFSLSVGF*LQSLRI
Trigger: GATTCGGAGGCTTTGCAGGCAAAATCCAACAGAAAG...AGAAAAGTTGATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395578.3
ENST00000545647.5
ENST00000628926.1
CDS-3UTR GCA 90 bp TTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCAACTTTTCTTCTCTCCTCTTCCCATTGTaGAGGAATTTCTTTTCCCTA +
Preference number: 4 (lower is better)
Translates to: LILEVLFCRVQAVINFSSLLFPL*RNFFSL
Trigger: TAGGGAAAAGAAATTCCTGCACAATGGGAAGAGGAG...AGAAGAAAAGTTGATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395578.3
ENST00000545647.5
ENST00000628926.1
CDS-3UTR GCA 90 bp TTATTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCAACTTTTCTACTATTGCTCAATCTTaGCTCTCCCTGGACTCATGT +
Preference number: 4 (lower is better)
Translates to: LLILEVLFCRVQAVINFSTIAQS*LSLDSC
Trigger: ACATGAGTCCAGGGAGAGGCAAGATTGAGCAATAGT...AGAAAAGTTGATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000545647.5
CDS-3UTR CCA 90 bp CATTTTAAGATACCACCATGCTTATATGAAGTTGCTGAGAGCTGGGGAGCTCTCTACAATTGTATAAAATaGCAAGCTCCCCAAATGTGG +
Preference number: 4 (lower is better)
Translates to: HFKIPPCLYEVAESWGALYNCIK*QAPQMW
Trigger: CCACATTTGGGGAGCTTGCCATTTTATACAATTGTA...GAGAGCTCCCCAGCTCTCAGCAACTTCATATAAGCATGGTGGTATCTTAAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000395578.3
CDS-3UTR CCA 90 bp CATTTTAAGATACCACCATGCTTATATGAAGTTGCTGAGAGCTGGGGAGCTCTCAATGTACCGACAGTTTaGTTGAATGTTTCTCGATCT +
Preference number: 4 (lower is better)
Translates to: HFKIPPCLYEVAESWGALNVPTV*LNVSRS
Trigger: AGATCGAGAAACATTCAACCAAACTGTCGGTACATT...GAGAGCTCCCCAGCTCTCAGCAACTTCATATAAGCATGGTGGTATCTTAAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000545647.5
CDS-3UTR CCA 90 bp TTATTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCAACTTTTCTAAGCAACGCAGAATTTaGAGGTGGGTTCATCAAAGC +
Preference number: 4 (lower is better)
Translates to: LLILEVLFCRVQAVINFSKQRRI*RWVHQS
Trigger: GCTTTGATGAACCCACCTCCAAATTCTGCGTTGCTT...AGAAAAGTTGATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395578.3
ENST00000545647.5
ENST00000628926.1
CDS-3UTR TCA 90 bp TGTGTTGGATTATTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCATGTTTAGGTTTCACTaGACCATTTCCCATTTTGCT +
Preference number: 4 (lower is better)
Translates to: CVGLLILEVLFCRVQAVIMFRFH*TISHFA
Trigger: AGCAAAATGGGAAATGGTTCAGTGAAACCTAAACAT...GATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAATAATCCAACACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000628926.1
CDS-3UTR GCA 90 bp TTATTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCAACTTTTCTGAGTGTCCATCTGGGTaGTTAGAATGTTTAGGTTTC +
Preference number: 4 (lower is better)
Translates to: LLILEVLFCRVQAVINFSECPSG*LECLGF
Trigger: GAAACCTAAACATTCTAAGCACCCAGATGGACACTC...AGAAAAGTTGATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000628926.1
CDS-3UTR GCA 90 bp GGAAGGGATAGGAGGGATGCTGTTGTCCCTTTTACTTCTGAAATCCTATCACTTAAGTATTCTCCTTTCTaGAGTGTTTTTATCAGCTGT +
Preference number: 4 (lower is better)
Translates to: GRDRRDAVVPFTSEILSLKYSPF*SVFISC
Trigger: ACAGCTGATAAAAACACTGCAGAAAGGAGAATACTT...AAGTGATAGGATTTCAGAAGTAAAAGGGACAACAGCATCCCTCCTATCCCTTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545647.5
CDS-3UTR GCA 90 bp TGTGTTGGATTATTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCATCTATAACCAGGCATaGAACATCATTTTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: CVGLLILEVLFCRVQAVIIYNQA*NIIFFS
Trigger: GCTGAAGAAAATGATGTTGCATGCCTGGTTATAGAT...GATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAATAATCCAACACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395578.3
ENST00000545647.5
ENST00000628926.1
CDS-3UTR GCA 90 bp TTATTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCAACTTTTCTATCACGGTTCAGGTTTaGCACATATCCTTCAAGGTA +
Preference number: 4 (lower is better)
Translates to: LLILEVLFCRVQAVINFSITVQV*HISFKV
Trigger: TACCTTGAAGGATATGTGGCAAACCTGAACCGTGAT...AGAAAAGTTGATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395578.3
ENST00000545647.5
ENST00000628926.1
CDS-3UTR GCA 90 bp AAGCTAAATCACTTTCCCAGAGTCACTCAGTTAGGAAATGGTGGAGTTGGGATTTTGGTGTCAACTATGTaGTTCTTCCTTATACACTTC +
Preference number: 4 (lower is better)
Translates to: KLNHFPRVTQLGNGGVGILVSTM*FFLIHF
Trigger: GAAGTGTATAAGGAAGAAGCACATAGTTGACACCAA...AATCCCAACTCCACCATTTCCTAACTGAGTGACTCTGGGAAAGTGATTTAGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545647.5
CDS-3UTR GCA 90 bp TGTGTTGGATTATTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCTTGGTGTCAACTATGTaGTTCTTCCTTATACACTTC +
Preference number: 4 (lower is better)
Translates to: CVGLLILEVLFCRVQAVILVSTM*FFLIHF
Trigger: GAAGTGTATAAGGAAGAAGCACATAGTTGACACCAA...GATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAATAATCCAACACA
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395578.3
ENST00000545647.5
ENST00000628926.1
CDS-3UTR GCA 90 bp TTATTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCAACTTTTCTTGGGTTCATCAAAGCTaGCTCTGTCCCTTAATATAC +
Preference number: 4 (lower is better)
Translates to: LLILEVLFCRVQAVINFSWVHQS*LCPLIY
Trigger: GTATATTAAGGGACAGAGGCAGCTTTGATGAACCCA...AGAAAAGTTGATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395578.3
ENST00000545647.5
ENST00000628926.1
CDS-3UTR GCA 90 bp TTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCAACTTTTCTTCTATGCAGGTAATCAAATaGTTCTGTCACACAAGCAAC +
Preference number: 4 (lower is better)
Translates to: LILEVLFCRVQAVINFSSMQVIK*FCHTSN
Trigger: GTTGCTTGTGTGACAGAAGCATTTGATTACCTGCAT...AGAAGAAAAGTTGATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395578.3
ENST00000545647.5
ENST00000628926.1
CDS-3UTR GCA 90 bp TCAGTTACTTTAGGAAATGGTGCCACTGACTATTGCTCAATCTTGCCTCTCCCTTTTAAGATACCACCATaGTTATATGAAGTTGCTGAG +
Preference number: 4 (lower is better)
Translates to: SVTLGNGATDYCSILPLPFKIPP*LYEVAE
Trigger: CTCAGCAACTTCATATAAGCATGGTGGTATCTTAAA...AGGGAGAGGCAAGATTGAGCAATAGTCAGTGGCACCATTTCCTAAAGTAACTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000545647.5
CDS-3UTR CCA 90 bp TGTGTTGGATTATTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCCTCCTCATTATATTCTaGAATACCTCTCGATCTAGT +
Preference number: 4 (lower is better)
Translates to: CVGLLILEVLFCRVQAVILLIIF*NTSRSS
Trigger: ACTAGATCGAGAGGTATTCCAGAATATAATGAGGAG...GATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAATAATCCAACACA
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000628926.1
CDS-3UTR CCA 90 bp ACATACAACCATTCACCAGTGAAGTTCTTAGGTACTAGGTCCCATGCTATTGAATGTTTTTATCAGCTGTaGTTGATCATGGCCTTCTGT +
Preference number: 4 (lower is better)
Translates to: TYNHSPVKFLGTRSHAIECFYQL*LIMAFC
Trigger: ACAGAAGGCCATGATCAACCACAGCTGATAAAAACA...TTCAATAGCATGGGACCTAGTACCTAAGAACTTCACTGGTGAATGGTTGTATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545647.5
CDS-3UTR CCA 90 bp TGTGTTGGATTATTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCAATGTACCGACAGTTTaGTTGAATGTTTCTCGATCT +
Preference number: 4 (lower is better)
Translates to: CVGLLILEVLFCRVQAVINVPTV*LNVSRS
Trigger: AGATCGAGAAACATTCAACCAAACTGTCGGTACATT...GATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAATAATCCAACACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395578.3
ENST00000545647.5
ENST00000628926.1
CDS-3UTR TCA 90 bp TTATTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCAACTTTTCTGCAAGGATACACTTCTaGGGAAGTTTCTGTATTGTT +
Preference number: 4 (lower is better)
Translates to: LLILEVLFCRVQAVINFSARIHF*GSFCIV
Trigger: AACAATACAGAAACTTCCTCAGAAGTGTATCCTTGC...AGAAAAGTTGATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000628926.1
CDS-3UTR TCA 90 bp TTATTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCAACTTTTCTAGCAATAATGTTAGCTaGCCTGACATCATCACTGAT +
Preference number: 4 (lower is better)
Translates to: LLILEVLFCRVQAVINFSSNNVS*PDIITD
Trigger: ATCAGTGATGATGTCAGGTCAGCTAACATTATTGCT...AGAAAAGTTGATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395578.3
ENST00000545647.5
ENST00000628926.1
CDS-3UTR TCA 90 bp ACATACAACCATTCACCAGTGAAGTTCTTAGGTACTAGGTCCCATGCTATTGAACAAACGAGAAGGATATaGTTGGAATGGAACAATAGA +
Preference number: 4 (lower is better)
Translates to: TYNHSPVKFLGTRSHAIEQTRRI*LEWNNR
Trigger: TCTATTGTTCCATTCCAATCATATCCTTCTCGTTTG...TTCAATAGCATGGGACCTAGTACCTAAGAACTTCACTGGTGAATGGTTGTATGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545647.5
CDS-3UTR GCA 90 bp TTATTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCAACTTTTCTCCTTCAAGGTATTTTTaGAGCTCTTCAAATGTACCG +
Preference number: 4 (lower is better)
Translates to: LLILEVLFCRVQAVINFSPSRYF*SSSNVP
Trigger: CGGTACATTTGAAGAGCTGCAAAAATACCTTGAAGG...AGAAAAGTTGATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395578.3
ENST00000545647.5
ENST00000628926.1
CDS-3UTR GCA 90 bp TGTGTTGGATTATTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCTTTAAGATACCACCATaGTTATATGAAGTTGCTGAG +
Preference number: 4 (lower is better)
Translates to: CVGLLILEVLFCRVQAVIFKIPP*LYEVAE
Trigger: CTCAGCAACTTCATATAAGCATGGTGGTATCTTAAA...GATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAATAATCCAACACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000545647.5
CDS-3UTR CCA 90 bp TTATTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCAACTTTTCTTGTTTTTATCAGCTGTaGTTGATCATGGCCTTCTGT +
Preference number: 4 (lower is better)
Translates to: LLILEVLFCRVQAVINFSCFYQL*LIMAFC
Trigger: ACAGAAGGCCATGATCAACCACAGCTGATAAAAACA...AGAAAAGTTGATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395578.3
ENST00000545647.5
ENST00000628926.1
CDS-3UTR CCA 90 bp TTATTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCAACTTTTCTTACAATTGTATAAAATaGCAAGCTCCCCAAATGTGG +
Preference number: 4 (lower is better)
Translates to: LLILEVLFCRVQAVINFSYNCIK*QAPQMW
Trigger: CCACATTTGGGGAGCTTGCCATTTTATACAATTGTA...AGAAAAGTTGATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000628926.1
CDS-3UTR CCA 90 bp TTATTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCAACTTTTCTTCAGTTAGGAAATGGTaGAGTTGGGATTATTCAATG +
Preference number: 4 (lower is better)
Translates to: LLILEVLFCRVQAVINFSSVRKW*SWDYSM
Trigger: CATTGAATAATCCCAACTCCACCATTTCCTAACTGA...AGAAAAGTTGATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545647.5
CDS-3UTR TCA 90 bp AATAATTACCTGACTGGATTGATTGATTCAGTTACTTTAGGAAATGGTGCCACTAGCAATAATGTTAGCTaGCCTGACATCATCACTGAT +
Preference number: 4 (lower is better)
Translates to: NNYLTGLIDSVTLGNGATSNNVS*PDIITD
Trigger: ATCAGTGATGATGTCAGGTCAGCTAACATTATTGCT...AGTGGCACCATTTCCTAAAGTAACTGAATCAATCAATCCAGTCAGGTAATTATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000545647.5
CDS-3UTR TCA 90 bp AATAATTACCTGACTGGATTGATTGATTCAGTTACTTTAGGAAATGGTGCCACTAATGTGTTGGATTATTaGTCCTTGAGGTCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: NNYLTGLIDSVTLGNGATNVLDY*SLRSSS
Trigger: AGAAGAGGACCTCAAGGATCAATAATCCAACACATT...AGTGGCACCATTTCCTAAAGTAACTGAATCAATCAATCCAGTCAGGTAATTATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000545647.5
CDS-3UTR GCA 90 bp TTATTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCAACTTTTCTGTCTTTTCTGACTCTTaGTTTCTCAAAGGAAAATTC +
Preference number: 4 (lower is better)
Translates to: LLILEVLFCRVQAVINFSVFSDS*FLKGKF
Trigger: GAATTTTCCTTTGAGAAAGCAAGAGTCAGAAAAGAC...AGAAAAGTTGATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000628926.1
CDS-3UTR GCA 90 bp TTATTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCAACTTTTCTAAGTATTCTCCTTTCTaGAGTGTTTTTATCAGCTGT +
Preference number: 4 (lower is better)
Translates to: LLILEVLFCRVQAVINFSKYSPF*SVFISC
Trigger: ACAGCTGATAAAAACACTGCAGAAAGGAGAATACTT...AGAAAAGTTGATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAATAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395578.3
ENST00000545647.5
ENST00000628926.1
CDS-3UTR CCA 90 bp GTGAAGTTCTTAGGTACTAGGTCCCATGCTATTGAAACTATCCTACTTATTATTAGGAAATGGTGGAGTTaGGATTATTCAATGGTTCAG +
Preference number: 4 (lower is better)
Translates to: VKFLGTRSHAIETILLIIRKWWS*DYSMVQ
Trigger: CTGAACCATTGAATAATCCCAACTCCACCATTTCCT...AATAATAAGTAGGATAGTTTCAATAGCATGGGACCTAGTACCTAAGAACTTCAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545647.5
CDS-3UTR TCA 90 bp AATAATTACCTGACTGGATTGATTGATTCAGTTACTTTAGGAAATGGTGCCACTCAAACGAGAAGGATATaGTTGGAATGGAACAATAGA +
Preference number: 4 (lower is better)
Translates to: NNYLTGLIDSVTLGNGATQTRRI*LEWNNR
Trigger: TCTATTGTTCCATTCCAATCATATCCTTCTCGTTTG...AGTGGCACCATTTCCTAAAGTAACTGAATCAATCAATCCAGTCAGGTAATTATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000545647.5
CDS-3UTR TCA 90 bp AATAATTACCTGACTGGATTGATTGATTCAGTTACTTTAGGAAATGGTGCCACTCCTGACTGGATTGATTaGTTCAGTTACTTTAGGAAA +
Preference number: 4 (lower is better)
Translates to: NNYLTGLIDSVTLGNGATPDWID*FSYFRK
Trigger: TTTCCTAAAGTAACTGAATCAATCAATCCAGTCAGG...AGTGGCACCATTTCCTAAAGTAACTGAATCAATCAATCCAGTCAGGTAATTATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000545647.5
CDS-3UTR TCA 90 bp AATAATTACCTGACTGGATTGATTGATTCAGTTACTTTAGGAAATGGTGCCACTGCATACAGATACCAATaGTACATAAGATTCAGGACT +
Preference number: 4 (lower is better)
Translates to: NNYLTGLIDSVTLGNGATAYRYQ*YIRFRT
Trigger: AGTCCTGAATCTTATGTATCATTGGTATCTGTATGC...AGTGGCACCATTTCCTAAAGTAACTGAATCAATCAATCCAGTCAGGTAATTATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545647.5
CDS-3UTR CCA 90 bp AATAATTACCTGACTGGATTGATTGATTCAGTTACTTTAGGAAATGGTGCCACTCTCCTCATTATATTCTaGAATACCTCTCGATCTAGT +
Preference number: 4 (lower is better)
Translates to: NNYLTGLIDSVTLGNGATLLIIF*NTSRSS
Trigger: ACTAGATCGAGAGGTATTCCAGAATATAATGAGGAG...AGTGGCACCATTTCCTAAAGTAACTGAATCAATCAATCCAGTCAGGTAATTATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395578.3
CDS TCA 90 bp GGGTCCTACGCCCACGGAGTCTTGCTGATTGCTAGCACAGCAGTCTaGGATCAAACTGCAAGGCAGCAGCGAGGCTCGGGGAGGGGCGCC +
Preference number: 5 (lower is better)
Translates to: GSYAHGVLLIASTAV*DQTARQQRGSGRGA
Trigger: GGCGCCCCTCCCCGAGCCTCGCTGCTGCCTTGCAGTTTGATCTCAGACTGCTGTGCTAGCAATCAGCAAGACTCCGTGGGCGTAGGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509474.5
CDS TCA 90 bp CCTGCAGCTTGTTCAGCTGGATGCACTTGTTCTGGAGCTCCTCTGTaGGTTCAGCAATGGCCACAGTCTGCTTCGACAGCTGCTCCCGCA +
Preference number: 5 (lower is better)
Translates to: PAACSAGCTCSGAPL*VQQWPQSASTAAPA
Trigger: TGCGGGAGCAGCTGTCGAAGCAGACTGTGGCCATTGCTGAACTCACAGAGGAGCTCCAGAACAAGTGCATCCAGCTGAACAAGCTGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264399.6
ENST00000395578.3
ENST00000628926.1
CDS GCA 90 bp AGCTCCTCTGTGAGTTCAGCAATGGCCACAGTCTGCTTCGACAGCTaGTCCCGCAGCTCCTTCAAATGGTACTCCCGCTCCTGGATCTCA +
Preference number: 5 (lower is better)
Translates to: SSSVSSAMATVCFDS*SRSSFKWYSRSWIS
Trigger: TGAGATCCAGGAGCGGGAGTACCATTTGAAGGAGCTGCGGGAGCAGCTGTCGAAGCAGACTGTGGCCATTGCTGAACTCACAGAGGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264399.6
ENST00000395578.3
ENST00000628926.1
CDS GCA 90 bp CACTTGTTCTGGAGCTCCTCTGTGAGTTCAGCAATGGCCACAGTCTaGTTCGACAGCTGCTCCCGCAGCTCCTTCAAATGGTACTCCCGC +
Preference number: 5 (lower is better)
Translates to: HLFWSSSVSSAMATV*FDSCSRSSFKWYSR
Trigger: GCGGGAGTACCATTTGAAGGAGCTGCGGGAGCAGCTGTCGAAGCAGACTGTGGCCATTGCTGAACTCACAGAGGAGCTCCAGAACAAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264399.6
ENST00000395578.3
ENST00000628926.1
CDS CCA 90 bp ATGGCCACAGTCTGCTTCGACAGCTGCTCCCGCAGCTCCTTCAAATaGTACTCCCGCTCCTGGATCTCAGCATCCTTCCTCCTCAACTCT +
Preference number: 5 (lower is better)
Translates to: MATVCFDSCSRSSFK*YSRSWISASFLLNS
Trigger: AGAGTTGAGGAGGAAGGATGCTGAGATCCAGGAGCGGGAGTACCATTTGAAGGAGCTGCGGGAGCAGCTGTCGAAGCAGACTGTGGCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264399.6
ENST00000395578.3
ENST00000628926.1
CDS CCA 90 bp GACCAATCCAGAGGTCTTCCGGTGGACCTCAAGAGGCACTTTATCTaGAGAGGCCTGAAGCGGGCTTCCTCCCTGCATATGCACCACATC +
Preference number: 5 (lower is better)
Translates to: DQSRGLPVDLKRHFI*RGLKRASSLHMHHI
Trigger: GATGTGGTGCATATGCAGGGAGGAAGCCCGCTTCAGGCCTCTCCAGATAAAGTGCCTCTTGAGGTCCACCGGAAGACCTCTGGATTGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264399.6
ENST00000395578.3
ENST00000628926.1
CDS TCA 90 bp CATAGTATTCCTGGCTCGGAGGGTCCTACGCCCACGGAGTCTTGCTaGTTGCTAGCACAGCAGTCTGAGATCAAACTGCAAGGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: HSIPGSEGPTPTESC*LLAQQSEIKLQGSS
Trigger: GCTGCTGCCTTGCAGTTTGATCTCAGACTGCTGTGCTAGCAATCAGCAAGACTCCGTGGGCGTAGGACCCTCCGAGCCAGGAATACTATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509474.5
CDS CCA 90 bp GGGCTTCCTCCCTGCATATGCACCACATCCTGCAGCTTGTTCAGCTaGATGCACTTGTTCTGGAGCTCCTCTGTGAGTTCAGCAATGGCC +
Preference number: 5 (lower is better)
Translates to: GLPPCICTTSCSLFS*MHLFWSSSVSSAMA
Trigger: GGCCATTGCTGAACTCACAGAGGAGCTCCAGAACAAGTGCATCCAGCTGAACAAGCTGCAGGATGTGGTGCATATGCAGGGAGGAAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264399.6
ENST00000395578.3
ENST00000628926.1
CDS-3UTR CAA 90 bp TTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCAACTTTTCTTCTTTCCAGGTGCGCAGCTaGTCACCTCGGCGCGGCCGC +
Preference number: 5 (lower is better)
Translates to: LILEVLFCRVQAVINFSSFQVRS*SPRRGR
Trigger: GCGGCCGCGCCGAGGTGACAAGCTGCGCACCTGGAA...AGAAGAAAAGTTGATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000628926.1
CDS CCA 90 bp ATATGCACCACATCCTGCAGCTTGTTCAGCTGGATGCACTTGTTCTaGAGCTCCTCTGTGAGTTCAGCAATGGCCACAGTCTGCTTCGAC +
Preference number: 5 (lower is better)
Translates to: ICTTSCSLFSWMHLF*SSSVSSAMATVCFD
Trigger: GTCGAAGCAGACTGTGGCCATTGCTGAACTCACAGAGGAGCTCCAGAACAAGTGCATCCAGCTGAACAAGCTGCAGGATGTGGTGCATAT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264399.6
ENST00000395578.3
ENST00000628926.1
CDS-3UTR CAA 90 bp TTATTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCAACTTTTCTTTCCAGGTGCGCAGCTaGTCACCTCGGCGCGGCCGC +
Preference number: 5 (lower is better)
Translates to: LLILEVLFCRVQAVINFSFQVRS*SPRRGR
Trigger: GCGGCCGCGCCGAGGTGACAAGCTGCGCACCTGGAA...AGAAAAGTTGATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000628926.1
CDS-3UTR CAA 90 bp GTTACTTTAGGAAATGGTGCCACTGACTATTGCTCAATCTTGCCTCTCCCTGGACAGACACGCCAGCCTTaGCTCCCCTCCTGCTATGGA +
Preference number: 5 (lower is better)
Translates to: VTLGNGATDYCSILPLPGQTRQP*LPSCYG
Trigger: TCCATAGCAGGAGGGGAGCAAAGGCTGGCGTGTCTG...TCCAGGGAGAGGCAAGATTGAGCAATAGTCAGTGGCACCATTTCCTAAAGTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395578.3
CDS TCA 90 bp GTTCCCAGAGTGTCCATCTGGGTGCTTAGAATGTTTAGGTTTCACTaGACCATTTCCCATTTTGCTCAGGGACCTCACCAGACAGCCGGG +
Preference number: 5 (lower is better)
Translates to: VPRVSIWVLRMFRFH*TISHFAQGPHQTAG
Trigger: CCCGGCTGTCTGGTGAGGTCCCTGAGCAAAATGGGAAATGGTTCAGTGAAACCTAAACATTCTAAGCACCCAGATGGACACTCTGGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395578.3
CDS-3UTR CAA 90 bp TCAGTTACTTTAGGAAATGGTGCCACTGACTATTGCTCAATCTTGCCTCTCCCTCATAGGTCCGGGTTGTaGGCTCAGCAGACACGCCAG +
Preference number: 5 (lower is better)
Translates to: SVTLGNGATDYCSILPLPHRSGL*AQQTRQ
Trigger: CTGGCGTGTCTGCTGAGCCAACAACCCGGACCTATG...AGGGAGAGGCAAGATTGAGCAATAGTCAGTGGCACCATTTCCTAAAGTAACTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395578.3
CDS CCA 90 bp GTCCTGTGGCCTCCACTCCAAAGCCAGTGTTCAAACAGAATTGCATaGGACTCTACTGGTAGAAGCTCCTTTATCTGTCCAAAGTGGAGG +
Preference number: 5 (lower is better)
Translates to: VLWPPLQSQCSNRIA*DSTGRSSFICPKWR
Trigger: CCTCCACTTTGGACAGATAAAGGAGCTTCTACCAGTAGAGTCCCATGCAATTCTGTTTGAACACTGGCTTTGGAGTGGAGGCCACAGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509169.5
ENST00000545647.5
CDS-3UTR CAA 90 bp TGTGTTGGATTATTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCCAGACACGCCAGCCTTaGCTCCCCTCCTGCTATGGA +
Preference number: 5 (lower is better)
Translates to: CVGLLILEVLFCRVQAVIQTRQP*LPSCYG
Trigger: TCCATAGCAGGAGGGGAGCAAAGGCTGGCGTGTCTG...GATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAATAATCCAACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000628926.1
CDS-3UTR CAA 90 bp TGTGTTGGATTATTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCGGTCATAGGTCCGGGTaGTTGGCTCAGCAGACACGC +
Preference number: 5 (lower is better)
Translates to: CVGLLILEVLFCRVQAVIGHRSG*LAQQTR
Trigger: GCGTGTCTGCTGAGCCAACAACCCGGACCTATGACC...GATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAATAATCCAACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000628926.1
CDS-3UTR CAA 90 bp GGTGAAAGTCAGGAGGTTCTGTTGGCTACCATGGTTTCTGCAAACCACCATTTTCCAGAAAAGGGTGGGTaGCCCGTTAGGAGCTCATAC +
Preference number: 5 (lower is better)
Translates to: GESQEVLLATMVSANHHFPEKGG*PVRSSY
Trigger: GTATGAGCTCCTAACGGGCAACCCACCCTTTTCTGG...AAAATGGTGGTTTGCAGAAACCATGGTAGCCAACAGAACCTCCTGACTTTCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000545647.5
CDS TCA 90 bp GTTCCCAGAGTGTCCATCTGGGTGCTTAGAATGTTTAGGTTTCACTaGACCATTTCCCATTTTGCTCAGGGACCAGACAGCCGGGTAACT +
Preference number: 5 (lower is better)
Translates to: VPRVSIWVLRMFRFH*TISHFAQGPDSRVT
Trigger: AGTTACCCGGCTGTCTGGTCCCTGAGCAAAATGGGAAATGGTTCAGTGAAACCTAAACATTCTAAGCACCCAGATGGACACTCTGGGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264399.6
ENST00000628926.1
CDS GCA 90 bp AAATCTGGCCACCTTCTCCTTCAGCTGAATCATTTCCAGAGAGAGTaGTTTGGACAGCTTCCAGTTAGACATGGACCGCTTCGCATGTCT +
Preference number: 5 (lower is better)
Translates to: KSGHLLLQLNHFQRE*FGQLPVRHGPLRMS
Trigger: AGACATGCGAAGCGGTCCATGTCTAACTGGAAGCTGTCCAAAGCACTCTCTCTGGAAATGATTCAGCTGAAGGAGAAGGTGGCCAGATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264399.6
ENST00000395578.3
ENST00000509169.5
ENST00000509474.5
ENST00000545647.5
CDS-3UTR CAA 90 bp GGTGAAAGTCAGGAGGTTCTGTTGGCTACCATGGTTTCTGCAAACCACCATTTTTTCAGCTGGATGCACTaGTTCTGGAGCTCCTCTGTG +
Preference number: 5 (lower is better)
Translates to: GESQEVLLATMVSANHHFFSWMH*FWSSSV
Trigger: CACAGAGGAGCTCCAGAACAAGTGCATCCAGCTGAA...AAAATGGTGGTTTGCAGAAACCATGGTAGCCAACAGAACCTCCTGACTTTCACC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000395578.3
CDS-3UTR CAA 90 bp TTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCAACTTTTCTTCTCATAGGTCCGGGTTGTaGGCTCAGCAGACACGCCAG +
Preference number: 5 (lower is better)
Translates to: LILEVLFCRVQAVINFSSHRSGL*AQQTRQ
Trigger: CTGGCGTGTCTGCTGAGCCAACAACCCGGACCTATG...AGAAGAAAAGTTGATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000628926.1
CDS-3UTR CAA 90 bp TCAGTTACTTTAGGAAATGGTGCCACTGACTATTGCTCAATCTTGCCTCTCCCTCCAGAAAAGGGTGGGTaGCCCGTTAGGAGCTCATAC +
Preference number: 5 (lower is better)
Translates to: SVTLGNGATDYCSILPLPPEKGG*PVRSSY
Trigger: GTATGAGCTCCTAACGGGCAACCCACCCTTTTCTGG...AGGGAGAGGCAAGATTGAGCAATAGTCAGTGGCACCATTTCCTAAAGTAACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000545647.5
CDS TCA 90 bp TGGAATGGGGATGATGAGGAAAATCTGGCCACCTTCTCCTTCAGCTaGATCATTTCCAGAGAGAGTGCTTTGGACAGCTTCCAGTTAGAC +
Preference number: 5 (lower is better)
Translates to: WNGDDEENLATFSFS*IISRESALDSFQLD
Trigger: GTCTAACTGGAAGCTGTCCAAAGCACTCTCTCTGGAAATGATTCAGCTGAAGGAGAAGGTGGCCAGATTTTCCTCATCATCCCCATTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264399.6
ENST00000395578.3
ENST00000509169.5
ENST00000509474.5
ENST00000545647.5
CDS-3UTR CAA 90 bp TCAGTTACTTTAGGAAATGGTGCCACTGACTATTGCTCAATCTTGCCTCTCCCTACCACATCCTGCAGCTaGTTCAGCTGGATGCACTTG +
Preference number: 5 (lower is better)
Translates to: SVTLGNGATDYCSILPLPTTSCS*FSWMHL
Trigger: CAAGTGCATCCAGCTGAACAAGCTGCAGGATGTGGT...AGGGAGAGGCAAGATTGAGCAATAGTCAGTGGCACCATTTCCTAAAGTAACTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395578.3
CDS-3UTR CAA 90 bp CCACCATGCTTATATGAAGTTGCTGAGAGCTGGGGAGCTCTCCAAAATTCACCACAAGCAACGCAGAATTaGGAGGTGGGTTCATCAAAG +
Preference number: 5 (lower is better)
Translates to: PPCLYEVAESWGALQNSPQATQN*EVGSSK
Trigger: CTTTGATGAACCCACCTCCAAATTCTGCGTTGCTTG...TGGTGAATTTTGGAGAGCTCCCCAGCTCTCAGCAACTTCATATAAGCATGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000545647.5
CDS-3UTR CAA 90 bp TGTGTTGGATTATTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCCCAGAAAAGGGTGGGTaGCCCGTTAGGAGCTCATAC +
Preference number: 5 (lower is better)
Translates to: CVGLLILEVLFCRVQAVIPEKGG*PVRSSY
Trigger: GTATGAGCTCCTAACGGGCAACCCACCCTTTTCTGG...GATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAATAATCCAACACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395578.3
ENST00000545647.5
ENST00000628926.1
CDS-3UTR CAA 90 bp CCACCATGCTTATATGAAGTTGCTGAGAGCTGGGGAGCTCTCCAAAATTCACCACCTTTCTGTTGGATTTaGCCTGCAAAGCCTCCGAAT +
Preference number: 5 (lower is better)
Translates to: PPCLYEVAESWGALQNSPPFCWI*PAKPPN
Trigger: ATTCGGAGGCTTTGCAGGCAAAATCCAACAGAAAGG...TGGTGAATTTTGGAGAGCTCCCCAGCTCTCAGCAACTTCATATAAGCATGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000545647.5
CDS-3UTR CAA 90 bp GTCAGGAGGTTCTGTTGGCTACCATGGTTTCTGCAAACCACCATTTTAAGATACTCCAGAGAGAGTGCTTaGGACAGCTTCCAGTTAGAC +
Preference number: 5 (lower is better)
Translates to: VRRFCWLPWFLQTTILRYSRESA*DSFQLD
Trigger: GTCTAACTGGAAGCTGTCCAAAGCACTCTCTCTGGA...GTATCTTAAAATGGTGGTTTGCAGAAACCATGGTAGCCAACAGAACCTCCTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000545647.5
CDS-3UTR CAA 90 bp TCAGTTACTTTAGGAAATGGTGCCACTGACTATTGCTCAATCTTGCCTCTCCCTACATGCTCCTGCTGCTaGGTGTCAACTATGTGCTTC +
Preference number: 5 (lower is better)
Translates to: SVTLGNGATDYCSILPLPTCSCC*VSTMCF
Trigger: GAAGCACATAGTTGACACCAAGCAGCAGGAGCATGT...AGGGAGAGGCAAGATTGAGCAATAGTCAGTGGCACCATTTCCTAAAGTAACTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000545647.5
CDS-3UTR CAA 90 bp CATTTTAAGATACCACCATGCTTATATGAAGTTGCTGAGAGCTGGGGAGCTCTCGAACCATTTCCCATTTaGCTCAGGGACCTCACCAGA +
Preference number: 5 (lower is better)
Translates to: HFKIPPCLYEVAESWGALEPFPI*LRDLTR
Trigger: TCTGGTGAGGTCCCTGAGCAAAATGGGAAATGGTTC...GAGAGCTCCCCAGCTCTCAGCAACTTCATATAAGCATGGTGGTATCTTAAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395578.3
CDS CCA 90 bp GATGCAGGTAATCAAATGCTTCTGTCACACAAGCAACGCAGAATTTaGAGGTGGGTTCATCAAAGCTGCCTCTGTCCCTTAATATACTCC +
Preference number: 5 (lower is better)
Translates to: DAGNQMLLSHKQRRI*RWVHQSCLCPLIYS
Trigger: GGAGTATATTAAGGGACAGAGGCAGCTTTGATGAACCCACCTCCAAATTCTGCGTTGCTTGTGTGACAGAAGCATTTGATTACCTGCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264399.6
ENST00000395578.3
ENST00000509169.5
ENST00000509474.5
ENST00000545647.5
ENST00000628926.1
CDS-3UTR CAA 90 bp TTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCAACTTTTCTTCTTTCAGCTGGATGCACTaGTTCTGGAGCTCCTCTGTG +
Preference number: 5 (lower is better)
Translates to: LILEVLFCRVQAVINFSSFSWMH*FWSSSV
Trigger: CACAGAGGAGCTCCAGAACAAGTGCATCCAGCTGAA...AGAAGAAAAGTTGATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000628926.1
CDS-3UTR CAA 90 bp TCAGTTACTTTAGGAAATGGTGCCACTGACTATTGCTCAATCTTGCCTCTCCCTCATCACGGTTCAGGTTaGCCACATATCCTTCAAGGT +
Preference number: 5 (lower is better)
Translates to: SVTLGNGATDYCSILPLPHHGSG*PHILQG
Trigger: ACCTTGAAGGATATGTGGCAAACCTGAACCGTGATG...AGGGAGAGGCAAGATTGAGCAATAGTCAGTGGCACCATTTCCTAAAGTAACTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000545647.5
CDS-3UTR CAA 90 bp TGTGTTGGATTATTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCACATGCTCCTGCTGCTaGGTGTCAACTATGTGCTTC +
Preference number: 5 (lower is better)
Translates to: CVGLLILEVLFCRVQAVITCSCC*VSTMCF
Trigger: GAAGCACATAGTTGACACCAAGCAGCAGGAGCATGT...GATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAATAATCCAACACA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395578.3
ENST00000545647.5
ENST00000628926.1
CDS-3UTR CAA 90 bp GTCAGGAGGTTCTGTTGGCTACCATGGTTTCTGCAAACCACCATTTTAAGATACCAAGCAACGCAGAATTaGGAGGTGGGTTCATCAAAG +
Preference number: 5 (lower is better)
Translates to: VRRFCWLPWFLQTTILRYQATQN*EVGSSK
Trigger: CTTTGATGAACCCACCTCCAAATTCTGCGTTGCTTG...GTATCTTAAAATGGTGGTTTGCAGAAACCATGGTAGCCAACAGAACCTCCTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000545647.5
CDS-3UTR CAA 90 bp GTTACTTTAGGAAATGGTGCCACTGACTATTGCTCAATCTTGCCTCTCCCTGGAATTGTAGGTCATCATTaGGTCAACCCCAGAAAAGGG +
Preference number: 5 (lower is better)
Translates to: VTLGNGATDYCSILPLPGIVGHH*VNPRKG
Trigger: CCCTTTTCTGGGGTTGACCAAATGATGACCTACAAT...TCCAGGGAGAGGCAAGATTGAGCAATAGTCAGTGGCACCATTTCCTAAAGTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000545647.5
CDS-3UTR CAA 90 bp CCACCATGCTTATATGAAGTTGCTGAGAGCTGGGGAGCTCTCCAAAATTCACCAATTCTCCTCTTCCCATaGTGCAGGAATTTCTTTTCC +
Preference number: 5 (lower is better)
Translates to: PPCLYEVAESWGALQNSPILLFP*CRNFFS
Trigger: GGAAAAGAAATTCCTGCACAATGGGAAGAGGAGAAT...TGGTGAATTTTGGAGAGCTCCCCAGCTCTCAGCAACTTCATATAAGCATGGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000545647.5
CDS-3UTR CAA 90 bp TTATTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCAACTTTTCTGAACCATTTCCCATTTaGCTCAGGGACCAGACAGCC +
Preference number: 5 (lower is better)
Translates to: LLILEVLFCRVQAVINFSEPFPI*LRDQTA
Trigger: GGCTGTCTGGTCCCTGAGCAAAATGGGAAATGGTTC...AGAAAAGTTGATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628926.1
CDS-3UTR CAA 90 bp TTATTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCAACTTTTCTACCACATCCTGCAGCTaGTTCAGCTGGATGCACTTG +
Preference number: 5 (lower is better)
Translates to: LLILEVLFCRVQAVINFSTTSCS*FSWMHL
Trigger: CAAGTGCATCCAGCTGAACAAGCTGCAGGATGTGGT...AGAAAAGTTGATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000628926.1
CDS-3UTR CAA 90 bp GGTGAAAGTCAGGAGGTTCTGTTGGCTACCATGGTTTCTGCAAACCACCATTTTGTTTCCTGGTTCTCCTaGCTTAATAATGTAACTCCC +
Preference number: 5 (lower is better)
Translates to: GESQEVLLATMVSANHHFVSWFS*LNNVTP
Trigger: GGGAGTTACATTATTAAGCAAGGAGAACCAGGAAAC...AAAATGGTGGTTTGCAGAAACCATGGTAGCCAACAGAACCTCCTGACTTTCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395578.3
CDS-3UTR CAA 90 bp GTTACTTTAGGAAATGGTGCCACTGACTATTGCTCAATCTTGCCTCTCCCTGGAGCAGTCCTTGTACAATaGTATAAAATGGCAAGCTCC +
Preference number: 5 (lower is better)
Translates to: VTLGNGATDYCSILPLPGAVLVQ*YKMASS
Trigger: GGAGCTTGCCATTTTATACAATTGTACAAGGACTGC...TCCAGGGAGAGGCAAGATTGAGCAATAGTCAGTGGCACCATTTCCTAAAGTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395578.3
CDS-3UTR CAA 90 bp CCACCATGCTTATATGAAGTTGCTGAGAGCTGGGGAGCTCTCCAAAATTCACCAGTACCGACAGTTTGGTaGAATGTTTCTCGATCTATA +
Preference number: 5 (lower is better)
Translates to: PPCLYEVAESWGALQNSPVPTVW*NVSRSI
Trigger: TATAGATCGAGAAACATTCAACCAAACTGTCGGTAC...TGGTGAATTTTGGAGAGCTCCCCAGCTCTCAGCAACTTCATATAAGCATGGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000545647.5
CDS-3UTR CAA 90 bp ACATACAACCATTCACCAGTGAAGTTCTTAGGTACTAGGTCCCATGCTATTGAATCCAGAGAGAGTGCTTaGGACAGCTTCCAGTTAGAC +
Preference number: 5 (lower is better)
Translates to: TYNHSPVKFLGTRSHAIESRESA*DSFQLD
Trigger: GTCTAACTGGAAGCTGTCCAAAGCACTCTCTCTGGA...TTCAATAGCATGGGACCTAGTACCTAAGAACTTCACTGGTGAATGGTTGTATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545647.5
CDS-3UTR CAA 90 bp TTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCAACTTTTCTTCTTCCAGAGAGAGTGCTTaGGACAGCTTCCAGTTAGAC +
Preference number: 5 (lower is better)
Translates to: LILEVLFCRVQAVINFSSSRESA*DSFQLD
Trigger: GTCTAACTGGAAGCTGTCCAAAGCACTCTCTCTGGA...AGAAGAAAAGTTGATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395578.3
ENST00000545647.5
ENST00000628926.1
CDS-3UTR CAA 90 bp TTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCAACTTTTCTTCTACATGCTCCTGCTGCTaGGTGTCAACTATGTGCTTC +
Preference number: 5 (lower is better)
Translates to: LILEVLFCRVQAVINFSSTCSCC*VSTMCF
Trigger: GAAGCACATAGTTGACACCAAGCAGCAGGAGCATGT...AGAAGAAAAGTTGATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395578.3
ENST00000545647.5
ENST00000628926.1
CDS-3UTR CAA 90 bp CATTTTAAGATACCACCATGCTTATATGAAGTTGCTGAGAGCTGGGGAGCTCTCATTGTAGGTCATCATTaGGTCAACCCCAGAAAAGGG +
Preference number: 5 (lower is better)
Translates to: HFKIPPCLYEVAESWGALIVGHH*VNPRKG
Trigger: CCCTTTTCTGGGGTTGACCAAATGATGACCTACAAT...GAGAGCTCCCCAGCTCTCAGCAACTTCATATAAGCATGGTGGTATCTTAAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000545647.5
CDS-3UTR CAA 90 bp AAGCTAAATCACTTTCCCAGAGTCACTCAGTTAGGAAATGGTGGAGTTGGGATTCCTTTCTGTTGGATTTaGCCTGCAAAGCCTCCGAAT +
Preference number: 5 (lower is better)
Translates to: KLNHFPRVTQLGNGGVGIPFCWI*PAKPPN
Trigger: ATTCGGAGGCTTTGCAGGCAAAATCCAACAGAAAGG...AATCCCAACTCCACCATTTCCTAACTGAGTGACTCTGGGAAAGTGATTTAGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545647.5
CDS-3UTR CAA 90 bp TGTGTTGGATTATTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCCCTTTCTGTTGGATTTaGCCTGCAAAGCCTCCGAAT +
Preference number: 5 (lower is better)
Translates to: CVGLLILEVLFCRVQAVIPFCWI*PAKPPN
Trigger: ATTCGGAGGCTTTGCAGGCAAAATCCAACAGAAAGG...GATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAATAATCCAACACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395578.3
ENST00000545647.5
ENST00000628926.1
CDS-3UTR CAA 90 bp TTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCAACTTTTCTTCTAGTCAGGAGGTTCTGTaGGCTACCATGGTTTCTGCA +
Preference number: 5 (lower is better)
Translates to: LILEVLFCRVQAVINFSSSQEVL*ATMVSA
Trigger: TGCAGAAACCATGGTAGCCAACAGAACCTCCTGACT...AGAAGAAAAGTTGATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000545647.5
CDS-3UTR CAA 90 bp TGTGTTGGATTATTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCTTGTTCATCTCTAGCTaGGGCTGTCCTCCTCATTAT +
Preference number: 5 (lower is better)
Translates to: CVGLLILEVLFCRVQAVILFISS*GCPPHY
Trigger: ATAATGAGGAGGACAGCCCAAGCTAGAGATGAACAA...GATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAATAATCCAACACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000628926.1
CDS-3UTR CAA 90 bp GGTGAAAGTCAGGAGGTTCTGTTGGCTACCATGGTTTCTGCAAACCACCATTTTGTACCGACAGTTTGGTaGAATGTTTCTCGATCTATA +
Preference number: 5 (lower is better)
Translates to: GESQEVLLATMVSANHHFVPTVW*NVSRSI
Trigger: TATAGATCGAGAAACATTCAACCAAACTGTCGGTAC...AAAATGGTGGTTTGCAGAAACCATGGTAGCCAACAGAACCTCCTGACTTTCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000545647.5
CDS-3UTR CAA 90 bp GTTACTTTAGGAAATGGTGCCACTGACTATTGCTCAATCTTGCCTCTCCCTGGAAAATGTACCGACAGTTaGGTTGAATGTTTCTCGATC +
Preference number: 5 (lower is better)
Translates to: VTLGNGATDYCSILPLPGKCTDS*VECFSI
Trigger: GATCGAGAAACATTCAACCAAACTGTCGGTACATTT...TCCAGGGAGAGGCAAGATTGAGCAATAGTCAGTGGCACCATTTCCTAAAGTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000545647.5
CDS-3UTR CAA 90 bp ACATACAACCATTCACCAGTGAAGTTCTTAGGTACTAGGTCCCATGCTATTGAACATCACGGTTCAGGTTaGCCACATATCCTTCAAGGT +
Preference number: 5 (lower is better)
Translates to: TYNHSPVKFLGTRSHAIEHHGSG*PHILQG
Trigger: ACCTTGAAGGATATGTGGCAAACCTGAACCGTGATG...TTCAATAGCATGGGACCTAGTACCTAAGAACTTCACTGGTGAATGGTTGTATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545647.5
CDS-3UTR CAA 90 bp TTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCAACTTTTCTTCTCAAGCAACGCAGAATTaGGAGGTGGGTTCATCAAAG +
Preference number: 5 (lower is better)
Translates to: LILEVLFCRVQAVINFSSQATQN*EVGSSK
Trigger: CTTTGATGAACCCACCTCCAAATTCTGCGTTGCTTG...AGAAGAAAAGTTGATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395578.3
ENST00000545647.5
ENST00000628926.1
CDS-3UTR CAA 90 bp TGTGTTGGATTATTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCAAGTCATGTCCCTTGTaGAGAATGACTTCAGGAGCT +
Preference number: 5 (lower is better)
Translates to: CVGLLILEVLFCRVQAVIKSCPL*RMTSGA
Trigger: AGCTCCTGAAGTCATTCTCAACAAGGGACATGACTT...GATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAATAATCCAACACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395578.3
ENST00000545647.5
ENST00000628926.1
CDS-3UTR CAA 90 bp CATTTTAAGATACCACCATGCTTATATGAAGTTGCTGAGAGCTGGGGAGCTCTCAAAGCCTTCGCAATTTaGTTCCAGCACGTTTTCTAC +
Preference number: 5 (lower is better)
Translates to: HFKIPPCLYEVAESWGALKAFAI*FQHVFY
Trigger: GTAGAAAACGTGCTGGAACAAAATTGCGAAGGCTTT...GAGAGCTCCCCAGCTCTCAGCAACTTCATATAAGCATGGTGGTATCTTAAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000545647.5
CDS-3UTR CAA 90 bp GTCAGGAGGTTCTGTTGGCTACCATGGTTTCTGCAAACCACCATTTTAAGATACTATCCTACTTATTATTaGGGAGAGTGCAAGGAAGGG +
Preference number: 5 (lower is better)
Translates to: VRRFCWLPWFLQTTILRYYPTYY*GECKEG
Trigger: CCCTTCCTTGCACTCTCCCAAATAATAAGTAGGATA...GTATCTTAAAATGGTGGTTTGCAGAAACCATGGTAGCCAACAGAACCTCCTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545647.5
CDS-3UTR CAA 90 bp CCACCATGCTTATATGAAGTTGCTGAGAGCTGGGGAGCTCTCCAAAATTCACCACTAGGTCCCATGCTATaGAAACTATCCTACTTATTA +
Preference number: 5 (lower is better)
Translates to: PPCLYEVAESWGALQNSPLGPML*KLSYLL
Trigger: TAATAAGTAGGATAGTTTCAATAGCATGGGACCTAG...TGGTGAATTTTGGAGAGCTCCCCAGCTCTCAGCAACTTCATATAAGCATGGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545647.5
CDS-3UTR CAA 90 bp TCAGTTACTTTAGGAAATGGTGCCACTGACTATTGCTCAATCTTGCCTCTCCCTTCACAGAGGCAGTCCTaGTACAATTGTATAAAATGG +
Preference number: 5 (lower is better)
Translates to: SVTLGNGATDYCSILPLPSQRQS*YNCIKW
Trigger: CCATTTTATACAATTGTACAAGGACTGCCTCTGTGA...AGGGAGAGGCAAGATTGAGCAATAGTCAGTGGCACCATTTCCTAAAGTAACTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395578.3
CDS-3UTR CAA 90 bp GTCAGGAGGTTCTGTTGGCTACCATGGTTTCTGCAAACCACCATTTTAAGATACGCCCATGTTTTAACATaGGTAATAGCTTTCACAGAG +
Preference number: 5 (lower is better)
Translates to: VRRFCWLPWFLQTTILRYAHVLT*VIAFTE
Trigger: CTCTGTGAAAGCTATTACCAATGTTAAAACATGGGC...GTATCTTAAAATGGTGGTTTGCAGAAACCATGGTAGCCAACAGAACCTCCTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395578.3
CDS-3UTR CAA 90 bp TCAGTTACTTTAGGAAATGGTGCCACTGACTATTGCTCAATCTTGCCTCTCCCTTCCTTCAAGGTATTTTaGCAGCTCTTCAAATGTACC +
Preference number: 5 (lower is better)
Translates to: SVTLGNGATDYCSILPLPSFKVF*QLFKCT
Trigger: GGTACATTTGAAGAGCTGCAAAAATACCTTGAAGGA...AGGGAGAGGCAAGATTGAGCAATAGTCAGTGGCACCATTTCCTAAAGTAACTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000545647.5
CDS-3UTR CAA 90 bp TTATTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCAACTTTTCTCATCACGGTTCAGGTTaGCCACATATCCTTCAAGGT +
Preference number: 5 (lower is better)
Translates to: LLILEVLFCRVQAVINFSHHGSG*PHILQG
Trigger: ACCTTGAAGGATATGTGGCAAACCTGAACCGTGATG...AGAAAAGTTGATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395578.3
ENST00000545647.5
ENST00000628926.1
CDS-3UTR CAA 90 bp TTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCAACTTTTCTTCTAAGTCATGTCCCTTGTaGAGAATGACTTCAGGAGCT +
Preference number: 5 (lower is better)
Translates to: LILEVLFCRVQAVINFSSKSCPL*RMTSGA
Trigger: AGCTCCTGAAGTCATTCTCAACAAGGGACATGACTT...AGAAGAAAAGTTGATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395578.3
ENST00000545647.5
ENST00000628926.1
CDS-3UTR CAA 90 bp AAGCTAAATCACTTTCCCAGAGTCACTCAGTTAGGAAATGGTGGAGTTGGGATTATAGGAGGGATGCTGTaGTCCCTTTTACTTCTGAAA +
Preference number: 5 (lower is better)
Translates to: KLNHFPRVTQLGNGGVGIIGGML*SLLLLK
Trigger: TTTCAGAAGTAAAAGGGACAACAGCATCCCTCCTAT...AATCCCAACTCCACCATTTCCTAACTGAGTGACTCTGGGAAAGTGATTTAGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545647.5
CDS-3UTR CAA 90 bp TTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCAACTTTTCTTCTTGGGAGGATAACACATaGACATGGTCAATCACAGGA +
Preference number: 5 (lower is better)
Translates to: LILEVLFCRVQAVINFSSWEDNT*TWSITG
Trigger: TCCTGTGATTGACCATGTCAATGTGTTATCCTCCCA...AGAAGAAAAGTTGATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545647.5
CDS GCA 90 bp TCATCATCACGGTTCAGGTTTGCCACATATCCTTCAAGGTATTTTTaGAGCTCTTCAAATGTACCGACAGTTTGGTTGAATGTTTCTCGA +
Preference number: 5 (lower is better)
Translates to: SSSRFRFATYPSRYF*SSSNVPTVWLNVSR
Trigger: TCGAGAAACATTCAACCAAACTGTCGGTACATTTGAAGAGCTGCAAAAATACCTTGAAGGATATGTGGCAAACCTGAACCGTGATGATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000264399.6
ENST00000395578.3
ENST00000456882.2
ENST00000509169.5
ENST00000509474.5
ENST00000545647.5
ENST00000628926.1
CDS-3UTR CAA 90 bp TTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCAACTTTTCTTCTGTTTCCTGGTTCTCCTaGCTTAATAATGTAACTCCC +
Preference number: 5 (lower is better)
Translates to: LILEVLFCRVQAVINFSSVSWFS*LNNVTP
Trigger: GGGAGTTACATTATTAAGCAAGGAGAACCAGGAAAC...AGAAGAAAAGTTGATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000628926.1
CDS-3UTR CAA 90 bp TTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCAACTTTTCTTCTGCAGTCCTTGTACAATaGTATAAAATGGCAAGCTCC +
Preference number: 5 (lower is better)
Translates to: LILEVLFCRVQAVINFSSAVLVQ*YKMASS
Trigger: GGAGCTTGCCATTTTATACAATTGTACAAGGACTGC...AGAAGAAAAGTTGATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000628926.1
CDS-3UTR CAA 90 bp TGTGTTGGATTATTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCTCACAGAGGCAGTCCTaGTACAATTGTATAAAATGG +
Preference number: 5 (lower is better)
Translates to: CVGLLILEVLFCRVQAVISQRQS*YNCIKW
Trigger: CCATTTTATACAATTGTACAAGGACTGCCTCTGTGA...GATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAATAATCCAACACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000628926.1
CDS-3UTR CAA 90 bp TGTGTTGGATTATTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCAAATGTACCGACAGTTaGGTTGAATGTTTCTCGATC +
Preference number: 5 (lower is better)
Translates to: CVGLLILEVLFCRVQAVIKCTDS*VECFSI
Trigger: GATCGAGAAACATTCAACCAAACTGTCGGTACATTT...GATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAATAATCCAACACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395578.3
ENST00000545647.5
ENST00000628926.1
CDS-3UTR CAA 90 bp TGTGTTGGATTATTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCTCCTTCAAGGTATTTTaGCAGCTCTTCAAATGTACC +
Preference number: 5 (lower is better)
Translates to: CVGLLILEVLFCRVQAVISFKVF*QLFKCT
Trigger: GGTACATTTGAAGAGCTGCAAAAATACCTTGAAGGA...GATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAATAATCCAACACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395578.3
ENST00000545647.5
ENST00000628926.1
CDS-3UTR CAA 90 bp TCAGTTAGGAAATGGTGGAGTTGGGATTATTCAATGGTTCAGTCTCTCATTTCTAAGTCATGTCCCTTGTaGAGAATGACTTCAGGAGCT +
Preference number: 5 (lower is better)
Translates to: SVRKWWSWDYSMVQSLISKSCPL*RMTSGA
Trigger: AGCTCCTGAAGTCATTCTCAACAAGGGACATGACTT...AGAAATGAGAGACTGAACCATTGAATAATCCCAACTCCACCATTTCCTAACTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545647.5
CDS-3UTR CAA 90 bp TTATTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCAACTTTTCTATTGTAGGTCATCATTaGGTCAACCCCAGAAAAGGG +
Preference number: 5 (lower is better)
Translates to: LLILEVLFCRVQAVINFSIVGHH*VNPRKG
Trigger: CCCTTTTCTGGGGTTGACCAAATGATGACCTACAAT...AGAAAAGTTGATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000395578.3
ENST00000545647.5
ENST00000628926.1
CDS-3UTR CAA 90 bp TTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCAACTTTTCTTCTATTCTCCTCTTCCCATaGTGCAGGAATTTCTTTTCC +
Preference number: 5 (lower is better)
Translates to: LILEVLFCRVQAVINFSSILLFP*CRNFFS
Trigger: GGAAAAGAAATTCCTGCACAATGGGAAGAGGAGAAT...AGAAGAAAAGTTGATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395578.3
ENST00000545647.5
ENST00000628926.1
CDS-3UTR CAA 90 bp GTGAAGTTCTTAGGTACTAGGTCCCATGCTATTGAAACTATCCTACTTATTATTCATGCTTATATGAAGTaGCTGAGAGCTGGGGAGCTC +
Preference number: 5 (lower is better)
Translates to: VKFLGTRSHAIETILLIIHAYMK*LRAGEL
Trigger: GAGCTCCCCAGCTCTCAGCAACTTCATATAAGCATG...AATAATAAGTAGGATAGTTTCAATAGCATGGGACCTAGTACCTAAGAACTTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545647.5
CDS-3UTR CAA 90 bp GTGAAGTTCTTAGGTACTAGGTCCCATGCTATTGAAACTATCCTACTTATTATTAGTCAGGAGGTTCTGTaGGCTACCATGGTTTCTGCA +
Preference number: 5 (lower is better)
Translates to: VKFLGTRSHAIETILLIISQEVL*ATMVSA
Trigger: TGCAGAAACCATGGTAGCCAACAGAACCTCCTGACT...AATAATAAGTAGGATAGTTTCAATAGCATGGGACCTAGTACCTAAGAACTTCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545647.5
CDS-3UTR CAA 90 bp TTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCAACTTTTCTTCTAAAGCCTTCGCAATTTaGTTCCAGCACGTTTTCTAC +
Preference number: 5 (lower is better)
Translates to: LILEVLFCRVQAVINFSSKAFAI*FQHVFY
Trigger: GTAGAAAACGTGCTGGAACAAAATTGCGAAGGCTTT...AGAAGAAAAGTTGATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000545647.5
CDS CCA 90 bp CTGTATTGTTCATCTCTAGCTTGGGCTGTCCTCCTCATTATATTCTaGAATACCTCTCGATCTAGTGCCCATGTTTTAACATTGGTAATA +
Preference number: 5 (lower is better)
Translates to: LYCSSLAWAVLLIIF*NTSRSSAHVLTLVI
Trigger: TATTACCAATGTTAAAACATGGGCACTAGATCGAGAGGTATTCCAGAATATAATGAGGAGGACAGCCCAAGCTAGAGATGAACAATACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264399.6
ENST00000395578.3
ENST00000628926.1
CDS-3UTR CAA 90 bp TGTGTTGGATTATTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCAATAATGTAACTCCCTaGCTGATAGTTTCTCCCATA +
Preference number: 5 (lower is better)
Translates to: CVGLLILEVLFCRVQAVINNVTP*LIVSPI
Trigger: TATGGGAGAAACTATCAGCAAGGGAGTTACATTATT...GATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAATAATCCAACACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000628926.1
CDS-3UTR CAA 90 bp TTATTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCAACTTTTCTAGTGTTCAAACAGAATaGCATGGGACTCTACTGGTA +
Preference number: 5 (lower is better)
Translates to: LLILEVLFCRVQAVINFSSVQTE*HGTLLV
Trigger: TACCAGTAGAGTCCCATGCAATTCTGTTTGAACACT...AGAAAAGTTGATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545647.5
CDS-3UTR CAA 90 bp TTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCAACTTTTCTTCTAATAATGTAACTCCCTaGCTGATAGTTTCTCCCATA +
Preference number: 5 (lower is better)
Translates to: LILEVLFCRVQAVINFSSNNVTP*LIVSPI
Trigger: TATGGGAGAAACTATCAGCAAGGGAGTTACATTATT...AGAAGAAAAGTTGATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000628926.1
CDS-3UTR CAA 90 bp TTATTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCAACTTTTCTGCCCATGTTTTAACATaGGTAATAGCTTTCACAGAG +
Preference number: 5 (lower is better)
Translates to: LLILEVLFCRVQAVINFSAHVLT*VIAFTE
Trigger: CTCTGTGAAAGCTATTACCAATGTTAAAACATGGGC...AGAAAAGTTGATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000628926.1
CDS-3UTR CAA 90 bp TTATTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCAACTTTTCTGTACCGACAGTTTGGTaGAATGTTTCTCGATCTATA +
Preference number: 5 (lower is better)
Translates to: LLILEVLFCRVQAVINFSVPTVW*NVSRSI
Trigger: TATAGATCGAGAAACATTCAACCAAACTGTCGGTAC...AGAAAAGTTGATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395578.3
ENST00000545647.5
ENST00000628926.1
CDS-3UTR CAA 90 bp TTATTGATCCTTGAGGTCCTCTTCTGTAGAGTACAGGCAGTAATCAACTTTTCTAAATGTACCGACAGTTaGGTTGAATGTTTCTCGATC +
Preference number: 5 (lower is better)
Translates to: LLILEVLFCRVQAVINFSKCTDS*VECFSI
Trigger: GATCGAGAAACATTCAACCAAACTGTCGGTACATTT...AGAAAAGTTGATTACTGCCTGTACTCTACAGAAGAGGACCTCAAGGATCAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395578.3
ENST00000545647.5
ENST00000628926.1
CDS-3UTR CAA 90 bp GTGAAGTTCTTAGGTACTAGGTCCCATGCTATTGAAACTATCCTACTTATTATTATGCACCTTTCTGGATaGGGCTTCACTTATCTAGCT +
Preference number: 5 (lower is better)
Translates to: VKFLGTRSHAIETILLIIMHLSG*GFTYLA
Trigger: AGCTAGATAAGTGAAGCCCAATCCAGAAAGGTGCAT...AATAATAAGTAGGATAGTTTCAATAGCATGGGACCTAGTACCTAAGAACTTCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545647.5
CDS-3UTR CAA 90 bp AATAATTACCTGACTGGATTGATTGATTCAGTTACTTTAGGAAATGGTGCCACTATTCTCCTCTTCCCATaGTGCAGGAATTTCTTTTCC +
Preference number: 5 (lower is better)
Translates to: NNYLTGLIDSVTLGNGATILLFP*CRNFFS
Trigger: GGAAAAGAAATTCCTGCACAATGGGAAGAGGAGAAT...AGTGGCACCATTTCCTAAAGTAACTGAATCAATCAATCCAGTCAGGTAATTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395578.3
ENST00000545647.5
CDS-3UTR CAA 90 bp GTGAAGTTCTTAGGTACTAGGTCCCATGCTATTGAAACTATCCTACTTATTATTTCCTTCAAGGTATTTTaGCAGCTCTTCAAATGTACC +
Preference number: 5 (lower is better)
Translates to: VKFLGTRSHAIETILLIISFKVF*QLFKCT
Trigger: GGTACATTTGAAGAGCTGCAAAAATACCTTGAAGGA...AATAATAAGTAGGATAGTTTCAATAGCATGGGACCTAGTACCTAAGAACTTCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545647.5
CDS GCA 72 bp CGGCTACGTGTGAGCCGGGGGCGCGGGTTAGCGCGATaGGGGCAGGAGCTGCGGCGGCGTCGGTGCTGCCGC +
Preference number: 6 (lower is better)
Translates to: RLRVSRGRGLAR*GQELRRRRCCR
Trigger: GCGGCAGCACCGACGCCGCCGCAGCTCCTGCCCGCATCGCGCTAACCCGCGCCCCCGGCTCACACGTAGCCG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264399.6
CDS CAA 72 bp GGACCAGACAGCCGGGTAACTTTCCAGGTGCGCAGCTaGTCACCTCGGCGCGGCCGCCCCTGCGTCTCAGCG +
Preference number: 6 (lower is better)
Translates to: GPDSRVTFQVRS*SPRRGRPCVSA
Trigger: CGCTGAGACGCAGGGGCGGCCGCGCCGAGGTGACAAGCTGCGCACCTGGAAAGTTACCCGGCTGTCTGGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264399.6
ENST00000628926.1
CDS CAA 90 bp TCAGGGACCTCACCAGACAGCCGGGTAACTTTCCAGGTGCGCAGCTaGTCACCTCGGCGCGGCCGCCCCTGCGTCTCAGCGTCCTCTCCC +
Preference number: 6 (lower is better)
Translates to: SGTSPDSRVTFQVRS*SPRRGRPCVSASSP
Trigger: GGGAGAGGACGCTGAGACGCAGGGGCGGCCGCGCCGAGGTGACAAGCTGCGCACCTGGAAAGTTACCCGGCTGTCTGGTGAGGTCCCTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395578.3
CDS CAA 72 bp TCACCAGACAGCCGGGTAACTTTCCAGGTGCGCAGCTaGTCACCTCGGCGCGGCCGCCCCTGCGTCTCAGCG +
Preference number: 6 (lower is better)
Translates to: SPDSRVTFQVRS*SPRRGRPCVSA
Trigger: CGCTGAGACGCAGGGGCGGCCGCGCCGAGGTGACAAGCTGCGCACCTGGAAAGTTACCCGGCTGTCTGGTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395578.3
CDS CAA 90 bp TTTGCTCAGGGACCAGACAGCCGGGTAACTTTCCAGGTGCGCAGCTaGTCACCTCGGCGCGGCCGCCCCTGCGTCTCAGCGTCCTCTCCC +
Preference number: 6 (lower is better)
Translates to: FAQGPDSRVTFQVRS*SPRRGRPCVSASSP
Trigger: GGGAGAGGACGCTGAGACGCAGGGGCGGCCGCGCCGAGGTGACAAGCTGCGCACCTGGAAAGTTACCCGGCTGTCTGGTCCCTGAGCAAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264399.6
ENST00000628926.1
CDS GCA 72 bp GAGGCTCGGGGAGGGGCGCCCGCCATTGCCCAGGCTTaGTTAGGTAAACAAAGCAGCCAGGAAGCTCAAACT +
Preference number: 6 (lower is better)
Translates to: EARGGAPAIAQA*LGKQSSQEAQT
Trigger: AGTTTGAGCTTCCTGGCTGCTTTGTTTACCTAAGCAAGCCTGGGCAATGGCGGGCGCCCCTCCCCGAGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509474.5
CDS TCA 72 bp GCCCACGGAGTCTTGCTGATTGCTAGCACAGCAGTCTaGGATCAAACTGCAAGGCAGCAGCGAGGCTCGGGG +
Preference number: 6 (lower is better)
Translates to: AHGVLLIASTAV*DQTARQQRGSG
Trigger: CCCCGAGCCTCGCTGCTGCCTTGCAGTTTGATCTCAGACTGCTGTGCTAGCAATCAGCAAGACTCCGTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509474.5
CDS CCA 72 bp TCAGCAGACACGCCAGCCTTTGCTCCCCTCCTGCTATaGAGAGAGACCAATCCAGAGGTCTTCCGGTGGACC +
Preference number: 6 (lower is better)
Translates to: SADTPAFAPLLL*RETNPEVFRWT
Trigger: GGTCCACCGGAAGACCTCTGGATTGGTCTCTCTCCATAGCAGGAGGGGAGCAAAGGCTGGCGTGTCTGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264399.6
ENST00000395578.3
ENST00000628926.1
CDS GCA 72 bp GTGAGTTCAGCAATGGCCACAGTCTGCTTCGACAGCTaGTCCCGCAGCTCCTTCAAATGGTACTCCCGCTCC +
Preference number: 6 (lower is better)
Translates to: VSSAMATVCFDS*SRSSFKWYSRS
Trigger: GGAGCGGGAGTACCATTTGAAGGAGCTGCGGGAGCAGCTGTCGAAGCAGACTGTGGCCATTGCTGAACTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264399.6
ENST00000395578.3
ENST00000628926.1
CDS CCA 72 bp GTCTGCTTCGACAGCTGCTCCCGCAGCTCCTTCAAATaGTACTCCCGCTCCTGGATCTCAGCATCCTTCCTC +
Preference number: 6 (lower is better)
Translates to: VCFDSCSRSSFK*YSRSWISASFL
Trigger: GAGGAAGGATGCTGAGATCCAGGAGCGGGAGTACCATTTGAAGGAGCTGCGGGAGCAGCTGTCGAAGCAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264399.6
ENST00000395578.3
ENST00000628926.1
CDS TCA 72 bp CCTGGCTCGGAGGGTCCTACGCCCACGGAGTCTTGCTaGTTGCTAGCACAGCAGTCTGAGATCAAACTGCAA +
Preference number: 6 (lower is better)
Translates to: PGSEGPTPTESC*LLAQQSEIKLQ
Trigger: TTGCAGTTTGATCTCAGACTGCTGTGCTAGCAATCAGCAAGACTCCGTGGGCGTAGGACCCTCCGAGCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509474.5
CDS GCA 72 bp TGGAGCTCCTCTGTGAGTTCAGCAATGGCCACAGTCTaGTTCGACAGCTGCTCCCGCAGCTCCTTCAAATGG +
Preference number: 6 (lower is better)
Translates to: WSSSVSSAMATV*FDSCSRSSFKW
Trigger: CCATTTGAAGGAGCTGCGGGAGCAGCTGTCGAAGCAGACTGTGGCCATTGCTGAACTCACAGAGGAGCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264399.6
ENST00000395578.3
ENST00000628926.1
CDS CCA 72 bp AGAGGTCTTCCGGTGGACCTCAAGAGGCACTTTATCTaGAGAGGCCTGAAGCGGGCTTCCTCCCTGCATATG +
Preference number: 6 (lower is better)
Translates to: RGLPVDLKRHFI*RGLKRASSLHM
Trigger: CATATGCAGGGAGGAAGCCCGCTTCAGGCCTCTCCAGATAAAGTGCCTCTTGAGGTCCACCGGAAGACCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264399.6
ENST00000395578.3
ENST00000628926.1
CDS CAA 72 bp GGGCTTCCTCCCTGCATATGCACCACATCCTGCAGCTaGTTCAGCTGGATGCACTTGTTCTGGAGCTCCTCT +
Preference number: 6 (lower is better)
Translates to: GLPPCICTTSCS*FSWMHLFWSSS
Trigger: AGAGGAGCTCCAGAACAAGTGCATCCAGCTGAACAAGCTGCAGGATGTGGTGCATATGCAGGGAGGAAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264399.6
ENST00000395578.3
ENST00000628926.1
CDS CAA 90 bp CCCTGCATATGCACCACATCCTGCAGCTTGTTCAGCTGGATGCACTaGTTCTGGAGCTCCTCTGTGAGTTCAGCAATGGCCACAGTCTGC +
Preference number: 6 (lower is better)
Translates to: PCICTTSCSLFSWMH*FWSSSVSSAMATVC
Trigger: GCAGACTGTGGCCATTGCTGAACTCACAGAGGAGCTCCAGAACAAGTGCATCCAGCTGAACAAGCTGCAGGATGTGGTGCATATGCAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264399.6
ENST00000395578.3
ENST00000628926.1
CDS CAA 72 bp TGCACCACATCCTGCAGCTTGTTCAGCTGGATGCACTaGTTCTGGAGCTCCTCTGTGAGTTCAGCAATGGCC +
Preference number: 6 (lower is better)
Translates to: CTTSCSLFSWMH*FWSSSVSSAMA
Trigger: GGCCATTGCTGAACTCACAGAGGAGCTCCAGAACAAGTGCATCCAGCTGAACAAGCTGCAGGATGTGGTGCA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264399.6
ENST00000395578.3
ENST00000628926.1
CDS CAA 90 bp ATCTCAGCATCCTTCCTCCTCAACTCTCTCTCCAGCTCTGTCACCTaGTTCCGCAGAGCATCAGTGGTGAGGTTCCCAGAGTGTCCATCT +
Preference number: 6 (lower is better)
Translates to: ISASFLLNSLSSSVT*FRRASVVRFPECPS
Trigger: AGATGGACACTCTGGGAACCTCACCACTGATGCTCTGCGGAACAAGGTGACAGAGCTGGAGAGAGAGTTGAGGAGGAAGGATGCTGAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264399.6
ENST00000395578.3
ENST00000628926.1
CDS TCA 72 bp TGTTCAGCTGGATGCACTTGTTCTGGAGCTCCTCTGTaGGTTCAGCAATGGCCACAGTCTGCTTCGACAGCT +
Preference number: 6 (lower is better)
Translates to: CSAGCTCSGAPL*VQQWPQSASTA
Trigger: AGCTGTCGAAGCAGACTGTGGCCATTGCTGAACTCACAGAGGAGCTCCAGAACAAGTGCATCCAGCTGAACA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264399.6
ENST00000395578.3
ENST00000628926.1
CDS CCA 72 bp ACATCCTGCAGCTTGTTCAGCTGGATGCACTTGTTCTaGAGCTCCTCTGTGAGTTCAGCAATGGCCACAGTC +
Preference number: 6 (lower is better)
Translates to: TSCSLFSWMHLF*SSSVSSAMATV
Trigger: GACTGTGGCCATTGCTGAACTCACAGAGGAGCTCCAGAACAAGTGCATCCAGCTGAACAAGCTGCAGGATGT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264399.6
ENST00000395578.3
ENST00000628926.1
CDS CCA 72 bp CCCTGCATATGCACCACATCCTGCAGCTTGTTCAGCTaGATGCACTTGTTCTGGAGCTCCTCTGTGAGTTCA +
Preference number: 6 (lower is better)
Translates to: PCICTTSCSLFS*MHLFWSSSVSS
Trigger: TGAACTCACAGAGGAGCTCCAGAACAAGTGCATCCAGCTGAACAAGCTGCAGGATGTGGTGCATATGCAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264399.6
ENST00000395578.3
ENST00000628926.1
CDS TCA 72 bp GTGATCTATGGGTCCCTTGAGCTCTCTTTGCAAAGGTaGTGGAAGGCTCCGTGCTTTCAGTCCCTCCCAATT +
Preference number: 6 (lower is better)
Translates to: VIYGSLELSLQR*WKAPCFQSLPI
Trigger: AATTGGGAGGGACTGAAAGCACGGAGCCTTCCATCACCTTTGCAAAGAGAGCTCAAGGGACCCATAGATCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264399.6
ENST00000395578.3
ENST00000509169.5
ENST00000509474.5
ENST00000545647.5
ENST00000628926.1
CDS CAA 90 bp AGGGGGTCCTGTGGCCTCCACTCCAAAGCCAGTGTTCAAACAGAATaGCATGGGACTCTACTGGTAGAAGCTCCTTTATCTGTCCAAAGT +
Preference number: 6 (lower is better)
Translates to: RGSCGLHSKASVQTE*HGTLLVEAPLSVQS
Trigger: ACTTTGGACAGATAAAGGAGCTTCTACCAGTAGAGTCCCATGCAATTCTGTTTGAACACTGGCTTTGGAGTGGAGGCCACAGGACCCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000509169.5
ENST00000545647.5
CDS GCA 72 bp CACCTTCTCCTTCAGCTGAATCATTTCCAGAGAGAGTaGTTTGGACAGCTTCCAGTTAGACATGGACCGCTT +
Preference number: 6 (lower is better)
Translates to: HLLLQLNHFQRE*FGQLPVRHGPL
Trigger: AAGCGGTCCATGTCTAACTGGAAGCTGTCCAAAGCACTCTCTCTGGAAATGATTCAGCTGAAGGAGAAGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264399.6
ENST00000395578.3
ENST00000509169.5
ENST00000509474.5
ENST00000545647.5
CDS GCA 72 bp AACCTTCTCCTTCAGCTGAATCATTTCCAGAGAGAGTaGTTTGGACAGCTTCCAGTTAGACATGGACCGCTT +
Preference number: 6 (lower is better)
Translates to: NLLLQLNHFQRE*FGQLPVRHGPL
Trigger: AAGCGGTCCATGTCTAACTGGAAGCTGTCCAAAGCACTCTCTCTGGAAATGATTCAGCTGAAGGAGAAGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456882.2
ENST00000628926.1
CDS CCA 72 bp CCTCCACTCCAAAGCCAGTGTTCAAACAGAATTGCATaGGACTCTACTGGTAGAAGCTCCTTTATCTGTCCA +
Preference number: 6 (lower is better)
Translates to: PPLQSQCSNRIA*DSTGRSSFICP
Trigger: TGGACAGATAAAGGAGCTTCTACCAGTAGAGTCCCATGCAATTCTGTTTGAACACTGGCTTTGGAGTGGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509169.5
ENST00000545647.5
CDS CCA 72 bp ATGCTTCTGTCACACAAGCAACGCAGAATTTGGAGGTaGGTTCATCAAAGCTGCCTCTGTCCCTTAATATAC +
Preference number: 6 (lower is better)
Translates to: MLLSHKQRRIWR*VHQSCLCPLIY
Trigger: GTATATTAAGGGACAGAGGCAGCTTTGATGAACCCACCTCCAAATTCTGCGTTGCTTGTGTGACAGAAGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264399.6
ENST00000395578.3
ENST00000509169.5
ENST00000509474.5
ENST00000545647.5
ENST00000628926.1
CDS CAA 72 bp AGTGACCAGAAATCCACACTGAAGTCATGTCCCTTGTaGAGAATGACTTCAGGAGCTACATATTCTGGAGTC +
Preference number: 6 (lower is better)
Translates to: SDQKSTLKSCPL*RMTSGATYSGV
Trigger: GACTCCAGAATATGTAGCTCCTGAAGTCATTCTCAACAAGGGACATGACTTCAGTGTGGATTTCTGGTCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264399.6
ENST00000395578.3
ENST00000509169.5
ENST00000509474.5
ENST00000545647.5
ENST00000628926.1
CDS CCA 72 bp TCATCTCTAGCTTGGGCTGTCCTCCTCATTATATTCTaGAATACCTCTCGATCTAGTGCCCATGTTTTAACA +
Preference number: 6 (lower is better)
Translates to: SSLAWAVLLIIF*NTSRSSAHVLT
Trigger: TGTTAAAACATGGGCACTAGATCGAGAGGTATTCCAGAATATAATGAGGAGGACAGCCCAAGCTAGAGATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264399.6
ENST00000395578.3
ENST00000628926.1
CDS CAA 72 bp TTGGTAATAGCTTTCACAGAGGCAGTCCTTGTACAATaGTATAAAATGGCAAGCTCCCCAAATGTGGTCCAC +
Preference number: 6 (lower is better)
Translates to: LVIAFTEAVLVQ*YKMASSPNVVH
Trigger: GTGGACCACATTTGGGGAGCTTGCCATTTTATACAATTGTACAAGGACTGCCTCTGTGAAAGCTATTACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264399.6
ENST00000395578.3
ENST00000628926.1
CDS CAA 90 bp AGCTCCCCACCTAAGCAGGCCTCCAGAAGCATGTATACATACTTATaGTCCTTGAAAGTACGATATAATTTCACAATGAATGGAGAGCAC +
Preference number: 6 (lower is better)
Translates to: SSPPKQASRSMYTYL*SLKVRYNFTMNGEH
Trigger: GTGCTCTCCATTCATTGTGAAATTATATCGTACTTTCAAGGACAATAAGTATGTATACATGCTTCTGGAGGCCTGCTTAGGTGGGGAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264399.6
ENST00000395578.3
ENST00000509169.5
ENST00000509474.5
ENST00000545647.5
ENST00000628926.1
CDS CAA 72 bp GTTTCCTGGTTCTCCTTGCTTAATAATGTAACTCCCTaGCTGATAGTTTCTCCCATACATGCATTCCACCAT +
Preference number: 6 (lower is better)
Translates to: VSWFSLLNNVTP*LIVSPIHAFHH
Trigger: ATGGTGGAATGCATGTATGGGAGAAACTATCAGCAAGGGAGTTACATTATTAAGCAAGGAGAACCAGGAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264399.6
ENST00000395578.3
ENST00000628926.1
CDS CAA 72 bp ACGGTTCAGGTTTGCCACATATCCTTCAAGGTATTTTaGCAGCTCTTCAAATGTACCGACAGTTTGGTTGAA +
Preference number: 6 (lower is better)
Translates to: TVQVCHISFKVF*QLFKCTDSLVE
Trigger: TTCAACCAAACTGTCGGTACATTTGAAGAGCTGCAAAAATACCTTGAAGGATATGTGGCAAACCTGAACCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000264399.6
ENST00000395578.3
ENST00000456882.2
ENST00000509169.5
ENST00000509474.5
ENST00000545647.5
ENST00000628926.1
CDS CAA 90 bp TTCATCATCACGGTTCAGGTTTGCCACATATCCTTCAAGGTATTTTaGCAGCTCTTCAAATGTACCGACAGTTTGGTTGAATGTTTCTCG +
Preference number: 6 (lower is better)
Translates to: FIITVQVCHISFKVF*QLFKCTDSLVECFS
Trigger: CGAGAAACATTCAACCAAACTGTCGGTACATTTGAAGAGCTGCAAAAATACCTTGAAGGATATGTGGCAAACCTGAACCGTGATGATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000264399.6
ENST00000395578.3
ENST00000456882.2
ENST00000509169.5
ENST00000509474.5
ENST00000545647.5
ENST00000628926.1
CDS CAA 90 bp TTCTCCAAAGTATTCTCCTTTCTGCAGTGTTTTTATCAGCTGTGGTaGATCATGGCCTTCTGTGCTCTGTGTTACTTTTACCTTTCCTTT +
Preference number: 6 (lower is better)
Translates to: FSKVFSFLQCFYQLW*IMAFCALCYFYLSF
Trigger: AAAGGAAAGGTAAAAGTAACACAGAGCACAGAAGGCCATGATCAACCACAGCTGATAAAAACACTGCAGAAAGGAGAATACTTTGGAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000264399.6
ENST00000395578.3
ENST00000456882.2
ENST00000509474.5
ENST00000628926.1
CDS CAA 90 bp AAAGATATGGTTTCCTGGTTCTCCTTGCTTAATAATGTAACTCCCTaGCTGATAGTTTCTCCCATACATGCATTCCACCATGTCTTTGAT +
Preference number: 6 (lower is better)
Translates to: KDMVSWFSLLNNVTP*LIVSPIHAFHHVFD
Trigger: ATCAAAGACATGGTGGAATGCATGTATGGGAGAAACTATCAGCAAGGGAGTTACATTATTAAGCAAGGAGAACCAGGAAACCATATCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264399.6
ENST00000395578.3
ENST00000628926.1
CDS CAA 90 bp TTCTCCAAAGTATTCTCCTTTCTGCAGTGTTTTTATCAGCTGTGGTaGATCATGGCCTTCTGTGCTCTGTGTTACTTTTACATAACATCA +
Preference number: 6 (lower is better)
Translates to: FSKVFSFLQCFYQLW*IMAFCALCYFYITS
Trigger: TGATGTTATGTAAAAGTAACACAGAGCACAGAAGGCCATGATCAACCACAGCTGATAAAAACACTGCAGAAAGGAGAATACTTTGGAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000509169.5
ENST00000545647.5
CDS CAA 72 bp CAGGCCTCCAGAAGCATGTATACATACTTATTGTCCTaGAAAGTACGATATAATTTCACAATGAATGGAGAG +
Preference number: 6 (lower is better)
Translates to: QASRSMYTYLLS*KVRYNFTMNGE
Trigger: CTCTCCATTCATTGTGAAATTATATCGTACTTTCAAGGACAATAAGTATGTATACATGCTTCTGGAGGCCTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264399.6
ENST00000395578.3
ENST00000509169.5
ENST00000509474.5
ENST00000545647.5
ENST00000628926.1