RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PRKD1 (Homo sapiens)

Ensembl gene IDs: ENSG00000184304

Ensembl transcript IDs: ENST00000331968.11, ENST00000415220.6, ENST00000468370.5, ENST00000546371.1, ENST00000549503.1, ENST00000551644.5, ENST00000616995.4, ENST00000651571.1, ENST00000651616.1

Found 706 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGACTGATGGTTCTGTTGGCGTCCTCGTGGTCTGGGTCTGGATCTTaGATCTCGCCACTGTCGTTCTGGCACTCTGCCATTGCCATCTCT +
Preference number: 1 (lower is better)
Translates to: GLMVLLASSWSGSGS*ISPLSFWHSAIAIS
Trigger: AGAGATGGCAATGGCAGAGTGCCAGAACGACAGTGGCGAGATGCAAGATCCAGACCCAGACCACGAGGACGCCAACAGAACCATCAGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR GCA 90 bp GTGTCACTGTGGCTAGCACTTGGATTGATCAGGTGTGTGGGGTACTaGAGCCCCTGCTCGCCTGCATACTTCTCCCACCTCAGGTCATCA +
Preference number: 1 (lower is better)
Translates to: VSLWLALGLIRCVGY*SPCSPAYFSHLRSS
Trigger: TGATGACCTGAGGTGGGAGAAGTATGCAGGCGAGCAGGGGCTGCAGTACCCCACACACCTGATCAATCCAAGTGCTAGCCACAGTGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR GCA 90 bp TGGCTAGCACTTGGATTGATCAGGTGTGTGGGGTACTGCAGCCCCTaGTCGCCTGCATACTTCTCCCACCTCAGGTCATCACTTTCATGG +
Preference number: 1 (lower is better)
Translates to: WLALGLIRCVGYCSP*SPAYFSHLRSSLSW
Trigger: CCATGAAAGTGATGACCTGAGGTGGGAGAAGTATGCAGGCGAGCAGGGGCTGCAGTACCCCACACACCTGATCAATCCAAGTGCTAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR CCA 90 bp TCCTCGTGGTCTGGGTCTGGATCTTGCATCTCGCCACTGTCGTTCTaGCACTCTGCCATTGCCATCTCTGCATCTTGGACCATTGCTTCT +
Preference number: 1 (lower is better)
Translates to: SSWSGSGSCISPLSF*HSAIAISASWTIAS
Trigger: AGAAGCAATGGTCCAAGATGCAGAGATGGCAATGGCAGAGTGCCAGAACGACAGTGGCGAGATGCAAGATCCAGACCCAGACCACGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR CCA 90 bp CATTTCTGTTTCTTCAGTCTCAGGAGTGTCACTGTGGCTAGCACTTaGATTGATCAGGTGTGTGGGGTACTGCAGCCCCTGCTCGCCTGC +
Preference number: 1 (lower is better)
Translates to: HFCFFSLRSVTVAST*IDQVCGVLQPLLAC
Trigger: GCAGGCGAGCAGGGGCTGCAGTACCCCACACACCTGATCAATCCAAGTGCTAGCCACAGTGACACTCCTGAGACTGAAGAAACAGAAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR GCA 90 bp ACTTGGATTGATCAGGTGTGTGGGGTACTGCAGCCCCTGCTCGCCTaGATACTTCTCCCACCTCAGGTCATCACTTTCATGGGTGATGTA +
Preference number: 1 (lower is better)
Translates to: TWIDQVCGVLQPLLA*ILLPPQVITFMGDV
Trigger: TACATCACCCATGAAAGTGATGACCTGAGGTGGGAGAAGTATGCAGGCGAGCAGGGGCTGCAGTACCCCACACACCTGATCAATCCAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR CCA 90 bp CCGAGGGCTTTCATTTCTGTTTCTTCAGTCTCAGGAGTGTCACTGTaGCTAGCACTTGGATTGATCAGGTGTGTGGGGTACTGCAGCCCC +
Preference number: 1 (lower is better)
Translates to: PRAFISVSSVSGVSL*LALGLIRCVGYCSP
Trigger: GGGGCTGCAGTACCCCACACACCTGATCAATCCAAGTGCTAGCCACAGTGACACTCCTGAGACTGAAGAAACAGAAATGAAAGCCCTCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR CCA 90 bp ATATTGTTGCTTGTTGATGGACTGATGGTTCTGTTGGCGTCCTCGTaGTCTGGGTCTGGATCTTGCATCTCGCCACTGTCGTTCTGGCAC +
Preference number: 1 (lower is better)
Translates to: ILLLVDGLMVLLASS*SGSGSCISPLSFWH
Trigger: GTGCCAGAACGACAGTGGCGAGATGCAAGATCCAGACCCAGACCACGAGGACGCCAACAGAACCATCAGTCCATCAACAAGCAACAATAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR GCA 90 bp TTGCATCTCGCCACTGTCGTTCTGGCACTCTGCCATTGCCATCTCTaGATCTTGGACCATTGCTTCTTCCATATCATCCATGAGCCCACT +
Preference number: 1 (lower is better)
Translates to: LHLATVVLALCHCHL*ILDHCFFHIIHEPT
Trigger: AGTGGGCTCATGGATGATATGGAAGAAGCAATGGTCCAAGATGCAGAGATGGCAATGGCAGAGTGCCAGAACGACAGTGGCGAGATGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR CCA 90 bp TCGCCACTGTCGTTCTGGCACTCTGCCATTGCCATCTCTGCATCTTaGACCATTGCTTCTTCCATATCATCCATGAGCCCACTGTTCCTT +
Preference number: 1 (lower is better)
Translates to: SPLSFWHSAIAISAS*TIASSISSMSPLFL
Trigger: AAGGAACAGTGGGCTCATGGATGATATGGAAGAAGCAATGGTCCAAGATGCAGAGATGGCAATGGCAGAGTGCCAGAACGACAGTGGCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR GCA 90 bp GTCTGGATCTTGCATCTCGCCACTGTCGTTCTGGCACTCTGCCATTaGCATCTCTGCATCTTGGACCATTGCTTCTTCCATATCATCCAT +
Preference number: 1 (lower is better)
Translates to: VWILHLATVVLALCH*HLCILDHCFFHIIH
Trigger: ATGGATGATATGGAAGAAGCAATGGTCCAAGATGCAGAGATGGCAATGGCAGAGTGCCAGAACGACAGTGGCGAGATGCAAGATCCAGAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR TCA 90 bp GGCCACATCTGCACCAACGCCACTGGTGAGAACACTGTTATTTGGTaGTGGGCTGGAAGGATTGACCACATTTTCTCCCACATAATACAC +
Preference number: 1 (lower is better)
Translates to: GHICTNATGENTVIW*WAGRIDHIFSHIIH
Trigger: GTGTATTATGTGGGAGAAAATGTGGTCAATCCTTCCAGCCCATCACCAAATAACAGTGTTCTCACCAGTGGCGTTGGTGCAGATGTGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR GCA 90 bp TCTAAGGCATTTAGGCTTAAGAGCACTAGGTCTTGCACAGCTAGGTaGATTGTCTTGAGTTTAAATATACTGAGGCACACCAGGCAGGCA +
Preference number: 1 (lower is better)
Translates to: SKAFRLKSTRSCTAR*IVLSLNILRHTRQA
Trigger: TGCCTGCCTGGTGTGCCTCAGTATATTTAAACTCAAGACAATGCACCTAGCTGTGCAAGACCTAGTGCTCTTAAGCCTAAATGCCTTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
3UTR GCA 90 bp GAGCCTTCTCCGCCTCACACCGCTGCAATTGTTGGGTATTTTAAATaGACATCTCTTATGGTAATTCAGACCACACCCTTCACATTTAAG +
Preference number: 1 (lower is better)
Translates to: EPSPPHTAAIVGYFK*TSLMVIQTTPFTFK
Trigger: CTTAAATGTGAAGGGTGTGGTCTGAATTACCATAAGAGATGTGCATTTAAAATACCCAACAATTGCAGCGGTGTGAGGCGGAGAAGGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651571.1
3UTR GCA 90 bp GCTGGAAGGATTGACCACATTTTCTCCCACATAATACACTACATTTaGCGTAGTGATTTCGAAACAATGAGGATTGGCCCCATTAGGAAT +
Preference number: 1 (lower is better)
Translates to: AGRIDHIFSHIIHYI*RSDFETMRIGPIRN
Trigger: ATTCCTAATGGGGCCAATCCTCATTGTTTCGAAATCACTACGGCAAATGTAGTGTATTATGTGGGAGAAAATGTGGTCAATCCTTCCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR GCA 90 bp GCAGTTTACATTTCTAAGGCATTTAGGCTTAAGAGCACTAGGTCTTaGACAGCTAGGTGCATTGTCTTGAGTTTAAATATACTGAGGCAC +
Preference number: 1 (lower is better)
Translates to: AVYISKAFRLKSTRS*TARCIVLSLNILRH
Trigger: GTGCCTCAGTATATTTAAACTCAAGACAATGCACCTAGCTGTGCAAGACCTAGTGCTCTTAAGCCTAAATGCCTTAGAAATGTAAACTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
3UTR CCA 90 bp GATAAGATCAATGGCTTCATGAGATATTTCCTTCCAGGGATTTGGTaGATACATGAAAGCTGCATTCTGAATTTGGTCGTGTATGTCTTC +
Preference number: 1 (lower is better)
Translates to: DKINGFMRYFLPGIW*IHESCILNLVVYVF
Trigger: GAAGACATACACGACCAAATTCAGAATGCAGCTTTCATGTATCCACCAAATCCCTGGAAGGAAATATCTCATGAAGCCATTGATCTTATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR CCA 90 bp GTTGATAAGATCAATGGCTTCATGAGATATTTCCTTCCAGGGATTTaGTGGATACATGAAAGCTGCATTCTGAATTTGGTCGTGTATGTC +
Preference number: 1 (lower is better)
Translates to: VDKINGFMRYFLPGI*WIHESCILNLVVYV
Trigger: GACATACACGACCAAATTCAGAATGCAGCTTTCATGTATCCACCAAATCCCTGGAAGGAAATATCTCATGAAGCCATTGATCTTATCAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR TCA 90 bp ACCAAACAGAACTACTTCACAGATACATTCTGTCTCTTACCAAAATaGAGCTCCAGTAAGAAAAACACTGATTTGCAAAGGCACAGTGGA +
Preference number: 1 (lower is better)
Translates to: TKQNYFTDTFCLLPK*SSSKKNTDLQRHSG
Trigger: TCCACTGTGCCTTTGCAAATCAGTGTTTTTCTTACTGGAGCTTCATTTTGGTAAGAGACAGAATGTATCTGTGAAGTAGTTCTGTTTGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
3UTR CCA 90 bp ACACAGTTGGTCACACAAAATACAAATGCTTCTGTTGATTTGTCTTaGCAACTCAGATACATCAACAGTGCTAACAGTTTAACAGCTTTG +
Preference number: 1 (lower is better)
Translates to: TQLVTQNTNASVDLS*QLRYINSANSLTAL
Trigger: CAAAGCTGTTAAACTGTTAGCACTGTTGATGTATCTGAGTTGCCAAGACAAATCAACAGAAGCATTTGTATTTTGTGTGACCAACTGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
3UTR-3UTR GCA 90 bp TGTACCCACGGAGGAGCCCTTGGGAATGACGGGCATAAGGGCATGCTGGATGGCTCCGCAGCGTGTCCTTaGTGGTGTAGTGGACCATCC +
Preference number: 2 (lower is better)
Translates to: CTHGGALGNDGHKGMLDGSAACP*WCSGPS
Trigger: GGATGGTCCACTACACCAGCAAGGACACGCTGCGGA...GCCATCCAGCATGCCCTTATGCCCGTCATTCCCAAGGGCTCCTCCGTGGGTACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR-3UTR CCA 90 bp TGTACCCACGGAGGAGCCCTTGGGAATGACGGGCATAAGGGCATGCTGGATGGCGGCGTCCTCGTGGTCTaGGTCTGGATCTTGCATCTC +
Preference number: 2 (lower is better)
Translates to: CTHGGALGNDGHKGMLDGGVLVV*VWILHL
Trigger: GAGATGCAAGATCCAGACCCAGACCACGAGGACGCC...GCCATCCAGCATGCCCTTATGCCCGTCATTCCCAAGGGCTCCTCCGTGGGTACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR-3UTR CCA 90 bp GGCATAAGGGCATGCTGGATGGCTATCTCCCACATCCTGGCCACATCTGCACCAAGCTTCTTGCAGTACTaGCACACTGTGGGCCGGGTG +
Preference number: 2 (lower is better)
Translates to: GIRACWMAISHILATSAPSFLQY*HTVGRV
Trigger: CACCCGGCCCACAGTGTGCCAGTACTGCAAGAAGCT...TGGTGCAGATGTGGCCAGGATGTGGGAGATAGCCATCCAGCATGCCCTTATGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR CAA 90 bp TGGACTGATGGTTCTGTTGGCGTCCTCGTGGTCTGGGTCTGGATCTaGCATCTCGCCACTGTCGTTCTGGCACTCTGCCATTGCCATCTC +
Preference number: 2 (lower is better)
Translates to: WTDGSVGVLVVWVWI*HLATVVLALCHCHL
Trigger: GAGATGGCAATGGCAGAGTGCCAGAACGACAGTGGCGAGATGCAAGATCCAGACCCAGACCACGAGGACGCCAACAGAACCATCAGTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR-3UTR TCA 90 bp GTGCAAGTTGGTTCCTGTACCCACGGAGGAGCCCTTGGGAATGACGGGCATAAGTCACATTTAAGACCTTaGCGTACCAGCCCCCACAGC +
Preference number: 2 (lower is better)
Translates to: VQVGSCTHGGALGNDGHKSHLRP*RTSPHS
Trigger: GCTGTGGGGGCTGGTACGTCAAGGTCTTAAATGTGA...CTTATGCCCGTCATTCCCAAGGGCTCCTCCGTGGGTACAGGAACCAACTTGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651571.1
3UTR CAA 90 bp TCTGTTTCTTCAGTCTCAGGAGTGTCACTGTGGCTAGCACTTGGATaGATCAGGTGTGTGGGGTACTGCAGCCCCTGCTCGCCTGCATAC +
Preference number: 2 (lower is better)
Translates to: SVSSVSGVSLWLALG*IRCVGYCSPCSPAY
Trigger: GTATGCAGGCGAGCAGGGGCTGCAGTACCCCACACACCTGATCAATCCAAGTGCTAGCCACAGTGACACTCCTGAGACTGAAGAAACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR-3UTR CCA 90 bp AGAGATATCTCTGTGCAAGTTGGTTCCTGTACCCACGGAGGAGCCCTTGGGAATAGTACTGGCACACTGTaGGCCGGGTGTAGGAGTGGA +
Preference number: 2 (lower is better)
Translates to: RDISVQVGSCTHGGALGNSTGTL*AGCRSG
Trigger: TCCACTCCTACACCCGGCCCACAGTGTGCCAGTACT...ATTCCCAAGGGCTCCTCCGTGGGTACAGGAACCAACTTGCACAGAGATATCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR-3UTR TCA 90 bp AGAGATATCTCTGTGCAAGTTGGTTCCTGTACCCACGGAGGAGCCCTTGGGAATACTGCAAGCCCTGCCTaGAAAGCCCCTTCAGAAGCT +
Preference number: 2 (lower is better)
Translates to: RDISVQVGSCTHGGALGNTASPA*KAPSEA
Trigger: AGCTTCTGAAGGGGCTTTTCAGGCAGGGCTTGCAGT...ATTCCCAAGGGCTCCTCCGTGGGTACAGGAACCAACTTGCACAGAGATATCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR-3UTR TCA 90 bp GGCATAAGGGCATGCTGGATGGCTATCTCCCACATCCTGGCCACATCTGCACCACTTCCATATCATCCATaGGCCCACTGTTCCTTTCAC +
Preference number: 2 (lower is better)
Translates to: GIRACWMAISHILATSAPLPYHP*AHCSFH
Trigger: GTGAAAGGAACAGTGGGCTCATGGATGATATGGAAG...TGGTGCAGATGTGGCCAGGATGTGGGAGATAGCCATCCAGCATGCCCTTATGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR-3UTR TCA 90 bp TTGGTTCCTGTACCCACGGAGGAGCCCTTGGGAATGACGGGCATAAGGGCATGCGTGATTTCGAAACAATaGGGATTGGCCCCATTAGGA +
Preference number: 2 (lower is better)
Translates to: LVPVPTEEPLGMTGIRACVISKQ*GLAPLG
Trigger: TCCTAATGGGGCCAATCCTCATTGTTTCGAAATCAC...GCATGCCCTTATGCCCGTCATTCCCAAGGGCTCCTCCGTGGGTACAGGAACCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR-3UTR CCA 90 bp ACCGAGGGCTTTCATTTCTGTTTCTTCAGTCTCAGGAGTGTCACTGTGGCTAGCCTGTTGGCGTCCTCGTaGTCTGGGTCTGGATCTTGC +
Preference number: 2 (lower is better)
Translates to: TEGFHFCFFSLRSVTVASLLASS*SGSGSC
Trigger: GCAAGATCCAGACCCAGACCACGAGGACGCCAACAG...GCTAGCCACAGTGACACTCCTGAGACTGAAGAAACAGAAATGAAAGCCCTCGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR CAA 90 bp CTCGCCACTGTCGTTCTGGCACTCTGCCATTGCCATCTCTGCATCTaGGACCATTGCTTCTTCCATATCATCCATGAGCCCACTGTTCCT +
Preference number: 2 (lower is better)
Translates to: LATVVLALCHCHLCI*DHCFFHIIHEPTVP
Trigger: AGGAACAGTGGGCTCATGGATGATATGGAAGAAGCAATGGTCCAAGATGCAGAGATGGCAATGGCAGAGTGCCAGAACGACAGTGGCGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR-3UTR TCA 90 bp TGTACCCACGGAGGAGCCCTTGGGAATGACGGGCATAAGGGCATGCTGGATGGCTACAAATGCTTCTGTTaGTTTGTCTTGGCAACTCAG +
Preference number: 2 (lower is better)
Translates to: CTHGGALGNDGHKGMLDGYKCFC*FVLATQ
Trigger: CTGAGTTGCCAAGACAAATCAACAGAAGCATTTGTA...GCCATCCAGCATGCCCTTATGCCCGTCATTCCCAAGGGCTCCTCCGTGGGTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR-3UTR GCA 90 bp AGTCTCAGGAGTGTCACTGTGGCTAGCACTTGGATTGATCAGGTGTGTGGGGTATTGCACTGCAAGCCCTaGCTGAAAAGCCCCTTCAGA +
Preference number: 2 (lower is better)
Translates to: SLRSVTVASTWIDQVCGVLHCKP*LKSPFR
Trigger: TCTGAAGGGGCTTTTCAGGCAGGGCTTGCAGTGCAA...TACCCCACACACCTGATCAATCCAAGTGCTAGCCACAGTGACACTCCTGAGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR-3UTR GCA 90 bp TGTACCCACGGAGGAGCCCTTGGGAATGACGGGCATAAGGGCATGCTGGATGGCTGCATCTTGGACCATTaGTTCTTCCATATCATCCAT +
Preference number: 2 (lower is better)
Translates to: CTHGGALGNDGHKGMLDGCILDH*FFHIIH
Trigger: ATGGATGATATGGAAGAAGCAATGGTCCAAGATGCA...GCCATCCAGCATGCCCTTATGCCCGTCATTCCCAAGGGCTCCTCCGTGGGTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR-3UTR GCA 90 bp AGTCCTGTAGCCAAGGGTGGCTCAAGGTCTTATCCACACTGTAGCGCTTTCTCATCTGGGTCTGGATCTTaGATCTCGCCACTGTCGTTC +
Preference number: 2 (lower is better)
Translates to: SPVAKGGSRSYPHCSAFSSGSGS*ISPLSF
Trigger: GAACGACAGTGGCGAGATGCAAGATCCAGACCCAGA...TGAGAAAGCGCTACAGTGTGGATAAGACCTTGAGCCACCCTTGGCTACAGGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR-3UTR CCA 90 bp GGCATAAGGGCATGCTGGATGGCTATCTCCCACATCCTGGCCACATCTGCACCAGCCATCTCTGCATCTTaGACCATTGCTTCTTCCATA +
Preference number: 2 (lower is better)
Translates to: GIRACWMAISHILATSAPAISAS*TIASSI
Trigger: TATGGAAGAAGCAATGGTCCAAGATGCAGAGATGGC...TGGTGCAGATGTGGCCAGGATGTGGGAGATAGCCATCCAGCATGCCCTTATGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR-3UTR GCA 90 bp AGTCCTGTAGCCAAGGGTGGCTCAAGGTCTTATCCACACTGTAGCGCTTTCTCACTGCAATCTTTGCACTaGAAGCCCTGCCTGAAAAGC +
Preference number: 2 (lower is better)
Translates to: SPVAKGGSRSYPHCSAFSLQSLH*KPCLKS
Trigger: GCTTTTCAGGCAGGGCTTGCAGTGCAAAGATTGCAG...TGAGAAAGCGCTACAGTGTGGATAAGACCTTGAGCCACCCTTGGCTACAGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR-3UTR CCA 90 bp AGTCCTGTAGCCAAGGGTGGCTCAAGGTCTTATCCACACTGTAGCGCTTTCTCAGCCAAGGCAGTTGTTTaGTACTTTCGGTGCACAACG +
Preference number: 2 (lower is better)
Translates to: SPVAKGGSRSYPHCSAFSAKAVV*YFRCTT
Trigger: CGTTGTGCACCGAAAGTACCAAACAACTGCCTTGGC...TGAGAAAGCGCTACAGTGTGGATAAGACCTTGAGCCACCCTTGGCTACAGGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR-3UTR GCA 90 bp AGTCCTGTAGCCAAGGGTGGCTCAAGGTCTTATCCACACTGTAGCGCTTTCTCATCTGATGGTGATTTTTaGAGAAGGGGCTCATCAGGG +
Preference number: 2 (lower is better)
Translates to: SPVAKGGSRSYPHCSAFSSDGDF*RRGSSG
Trigger: CCCTGATGAGCCCCTTCTGCAAAAATCACCATCAGA...TGAGAAAGCGCTACAGTGTGGATAAGACCTTGAGCCACCCTTGGCTACAGGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651571.1
3UTR-3UTR TCA 90 bp GTGCAAGTTGGTTCCTGTACCCACGGAGGAGCCCTTGGGAATGACGGGCATAAGAGCTTTGTTCTCATCTaGCAGAAAATAATGGCAGTT +
Preference number: 2 (lower is better)
Translates to: VQVGSCTHGGALGNDGHKSFVLI*QKIMAV
Trigger: AACTGCCATTATTTTCTGTCAGATGAGAACAAAGCT...CTTATGCCCGTCATTCCCAAGGGCTCCTCCGTGGGTACAGGAACCAACTTGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR-3UTR TCA 90 bp TTAATGGTCACTTCGCCAAGGCAGTTGTTTGGTACTTTCGGTGCACAACGTTTAAGTGAGGGAAACGTTTaGGAGCCTTCTCCGCCTCAC +
Preference number: 2 (lower is better)
Translates to: LMVTSPRQLFGTFGAQRLSEGNV*EPSPPH
Trigger: GTGAGGCGGAGAAGGCTCTCAAACGTTTCCCTCACT...TAAACGTTGTGCACCGAAAGTACCAAACAACTGCCTTGGCGAAGTGACCATTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651571.1
3UTR-3UTR TCA 90 bp ACCGAGGGCTTTCATTTCTGTTTCTTCAGTCTCAGGAGTGTCACTGTGGCTAGCACTGCACTACCCTCATaGGTGGGATATTGTTGCTTG +
Preference number: 2 (lower is better)
Translates to: TEGFHFCFFSLRSVTVASTALPS*VGYCCL
Trigger: CAAGCAACAATATCCCACTCATGAGGGTAGTGCAGT...GCTAGCCACAGTGACACTCCTGAGACTGAAGAAACAGAAATGAAAGCCCTCGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR-3UTR TCA 90 bp AGTCCTGTAGCCAAGGGTGGCTCAAGGTCTTATCCACACTGTAGCGCTTTCTCAAACACTGTTATTTGGTaGTGGGCTGGAAGGATTGAC +
Preference number: 2 (lower is better)
Translates to: SPVAKGGSRSYPHCSAFSNTVIW*WAGRID
Trigger: GTCAATCCTTCCAGCCCATCACCAAATAACAGTGTT...TGAGAAAGCGCTACAGTGTGGATAAGACCTTGAGCCACCCTTGGCTACAGGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR CAA 90 bp GCTTCTTCCATATCATCCATGAGCCCACTGTTCCTTTCACTATCATaGTCATCACTCCCTTCTTCCATGACCACATCAGACTCTGCCCCA +
Preference number: 2 (lower is better)
Translates to: ASSISSMSPLFLSLS*SSLPSSMTTSDSAP
Trigger: TGGGGCAGAGTCTGATGTGGTCATGGAAGAAGGGAGTGATGACAATGATAGTGAAAGGAACAGTGGGCTCATGGATGATATGGAAGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR-3UTR TCA 90 bp GCTATCCAATCTCCAATAGTGCCGTTTCCGCAGCGTGTCCTTGCTGGTGTAGTGCGTCCAATGTATGATTaGGAATTTGACCTCTTCTCT +
Preference number: 2 (lower is better)
Translates to: AIQSPIVPFPQRVLAGVVRPMYD*EFDLFS
Trigger: AGAGAAGAGGTCAAATTCTCAATCATACATTGGACG...CACTACACCAGCAAGGACACGCTGCGGAAACGGCACTATTGGAGATTGGATAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR-3UTR CCA 90 bp CTGACAGAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTAGTACTGGCACACTGTaGGCCGGGTGTAGGAGTGGA +
Preference number: 2 (lower is better)
Translates to: LTENNGSSARQMLNLTVCSTGTL*AGCRSG
Trigger: TCCACTCCTACACCCGGCCCACAGTGTGCCAGTACT...ACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTCTGTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR-3UTR CCA 90 bp CCCTTTTCACTTGACAAGATCATTTCCAGCATGTCTCCATGGAGTTTTTCCATACTGTTGGCGTCCTCGTaGTCTGGGTCTGGATCTTGC +
Preference number: 2 (lower is better)
Translates to: PFSLDKIISSMSPWSFSILLASS*SGSGSC
Trigger: GCAAGATCCAGACCCAGACCACGAGGACGCCAACAG...TATGGAAAAACTCCATGGAGACATGCTGGAAATGATCTTGTCAAGTGAAAAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR-3UTR TCA 90 bp AGGCTTAAGAGCACTAGGTCTTGCACAGCTAGGTGCATTGTCTTGAGTTTAAATAGAGAGTTCAGCAGATaGTGTGCGGATGGTGCTGAC +
Preference number: 2 (lower is better)
Translates to: RLKSTRSCTARCIVLSLNREFSR*CADGAD
Trigger: GTCAGCACCATCCGCACATCATCTGCTGAACTCTCT...ATTTAAACTCAAGACAATGCACCTAGCTGTGCAAGACCTAGTGCTCTTAAGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651571.1
3UTR-3UTR TCA 90 bp ATTGCTTCTTCCATATCATCCATGAGCCCACTGTTCCTTTCACTATCATTGTCACACTCCCTTCTTCCATaGCCACATCAGACTCTGCCC +
Preference number: 2 (lower is better)
Translates to: IASSISSMSPLFLSLSLSHSLLP*PHQTLP
Trigger: GGGCAGAGTCTGATGTGGTCATGGAAGAAGGGAGTG...TGACAATGATAGTGAAAGGAACAGTGGGCTCATGGATGATATGGAAGAAGCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR-3UTR TCA 90 bp AGTCTCAGGAGTGTCACTGTGGCTAGCACTTGGATTGATCAGGTGTGTGGGGTACTTCCTGTGTCATTCTaGAAGAGGGTAATACATTTG +
Preference number: 2 (lower is better)
Translates to: SLRSVTVASTWIDQVCGVLPVSF*KRVIHL
Trigger: CAAATGTATTACCCTCTTTCAGAATGACACAGGAAG...TACCCCACACACCTGATCAATCCAAGTGCTAGCCACAGTGACACTCCTGAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR-3UTR TCA 90 bp ACCGAGGGCTTTCATTTCTGTTTCTTCAGTCTCAGGAGTGTCACTGTGGCTAGCTACAAATGCTTCTGTTaGTTTGTCTTGGCAACTCAG +
Preference number: 2 (lower is better)
Translates to: TEGFHFCFFSLRSVTVASYKCFC*FVLATQ
Trigger: CTGAGTTGCCAAGACAAATCAACAGAAGCATTTGTA...GCTAGCCACAGTGACACTCCTGAGACTGAAGAAACAGAAATGAAAGCCCTCGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR-3UTR GCA 90 bp CCCTTTTCACTTGACAAGATCATTTCCAGCATGTCTCCATGGAGTTTTTCCATAGACCACATCAGACTCTaGCCCAGGGCTAAGCAAATC +
Preference number: 2 (lower is better)
Translates to: PFSLDKIISSMSPWSFSIDHIRL*PRAKQI
Trigger: GATTTGCTTAGCCCTGGGGCAGAGTCTGATGTGGTC...TATGGAAAAACTCCATGGAGACATGCTGGAAATGATCTTGTCAAGTGAAAAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR-3UTR CCA 90 bp ATTTTCTCCCACATAATACACTACATTTGCCGTAGTGATTTCGAAACAATGAGGAGCTTCTTGCAGTACTaGCACACTGTGGGCCGGGTG +
Preference number: 2 (lower is better)
Translates to: IFSHIIHYICRSDFETMRSFLQY*HTVGRV
Trigger: CACCCGGCCCACAGTGTGCCAGTACTGCAAGAAGCT...CCTCATTGTTTCGAAATCACTACGGCAAATGTAGTGTATTATGTGGGAGAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR-3UTR CCA 90 bp CCCTTTTCACTTGACAAGATCATTTCCAGCATGTCTCCATGGAGTTTTTCCATAGGCATAAGGGCATGCTaGATGGCTATCTCCCACATC +
Preference number: 2 (lower is better)
Translates to: PFSLDKIISSMSPWSFSIGIRAC*MAISHI
Trigger: GATGTGGGAGATAGCCATCCAGCATGCCCTTATGCC...TATGGAAAAACTCCATGGAGACATGCTGGAAATGATCTTGTCAAGTGAAAAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR CAA 90 bp TTTAGGCTTAAGAGCACTAGGTCTTGCACAGCTAGGTGCATTGTCTaGAGTTTAAATATACTGAGGCACACCAGGCAGGCAAAGGATTCA +
Preference number: 2 (lower is better)
Translates to: FRLKSTRSCTARCIV*SLNILRHTRQAKDS
Trigger: TGAATCCTTTGCCTGCCTGGTGTGCCTCAGTATATTTAAACTCAAGACAATGCACCTAGCTGTGCAAGACCTAGTGCTCTTAAGCCTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
3UTR CAA 90 bp ATCCATCCTTCTTTCATGACTGTGCTGCTTTTCCTCTTCGTGTGTTaGACAGACTGCACTACCCTCATGAGTGGGATATTGTTGCTTGTT +
Preference number: 2 (lower is better)
Translates to: IHPSFMTVLLFLFVC*TDCTTLMSGILLLV
Trigger: AACAAGCAACAATATCCCACTCATGAGGGTAGTGCAGTCTGTCAAACACACGAAGAGGAAAAGCAGCACAGTCATGAAAGAAGGATGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR-3UTR TCA 90 bp CCCTTTTCACTTGACAAGATCATTTCCAGCATGTCTCCATGGAGTTTTTCCATAGGAGCTCTGTATGAATaGACAAAGAGAGCGTGGGGA +
Preference number: 2 (lower is better)
Translates to: PFSLDKIISSMSPWSFSIGALYE*TKRAWG
Trigger: TCCCCACGCTCTCTTTGTTCATTCATACAGAGCTCC...TATGGAAAAACTCCATGGAGACATGCTGGAAATGATCTTGTCAAGTGAAAAGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000651571.1
3UTR-3UTR TCA 90 bp CTGACAGAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTTCCTCTTCGTGTGTTTaGCAGACTGCACTACCCTCA +
Preference number: 2 (lower is better)
Translates to: LTENNGSSARQMLNLTVCSSSCV*QTALPS
Trigger: TGAGGGTAGTGCAGTCTGTCAAACACACGAAGAGGA...ACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTCTGTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR-3UTR CCA 90 bp CAAGATCATTTCCAGCATGTCTCCATGGAGTTTTTCCATAACAACAAACACTCTGGCATAAGGGCATGCTaGATGGCTATCTCCCACATC +
Preference number: 2 (lower is better)
Translates to: QDHFQHVSMEFFHNNKHSGIRAC*MAISHI
Trigger: GATGTGGGAGATAGCCATCCAGCATGCCCTTATGCC...AGAGTGTTTGTTGTTATGGAAAAACTCCATGGAGACATGCTGGAAATGATCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR-3UTR TCA 90 bp GCATTTAGGCTTAAGAGCACTAGGTCTTGCACAGCTAGGTGCATTGTCTTGAGTAGAGTTTGTTTACAATaGCAACACCAATGGGACACA +
Preference number: 2 (lower is better)
Translates to: AFRLKSTRSCTARCIVLSRVCLQ*QHQWDT
Trigger: TGTGTCCCATTGGTGTTGTCATTGTAAACAAACTCT...ACTCAAGACAATGCACCTAGCTGTGCAAGACCTAGTGCTCTTAAGCCTAAATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
3UTR-3UTR TCA 90 bp GAGTTTGTTTACAATGACAACACCAATGGGACACACCAAACAGAACTACTTCACGATCCATCTACACAATaGAGTTGTGGCAATCCCAGG +
Preference number: 2 (lower is better)
Translates to: EFVYNDNTNGTHQTELLHDPSTQ*SCGNPR
Trigger: CCTGGGATTGCCACAACTTCATTGTGTAGATGGATC...GTGAAGTAGTTCTGTTTGGTGTGTCCCATTGGTGTTGTCATTGTAAACAAACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651571.1
3UTR-3UTR TCA 90 bp GGAGTTGTTCATAGAACACTGGAAATAATCGACTCTTCAAGAGTTTGTTTACAAGCGTGGGGACGAATCTaGAAGTCTTCAAAGGTGGCG +
Preference number: 2 (lower is better)
Translates to: GVVHRTLEIIDSSRVCLQAWGRI*KSSKVA
Trigger: CGCCACCTTTGAAGACTTTCAGATTCGTCCCCACGC...TTGTAAACAAACTCTTGAAGAGTCGATTATTTCCAGTGTTCTATGAACAACTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651571.1
3UTR-3UTR GCA 90 bp ATTTTCTCCCACATAATACACTACATTTGCCGTAGTGATTTCGAAACAATGAGGCTGGCACTCTGCCATTaGCATCTCTGCATCTTGGAC +
Preference number: 2 (lower is better)
Translates to: IFSHIIHYICRSDFETMRLALCH*HLCILD
Trigger: GTCCAAGATGCAGAGATGGCAATGGCAGAGTGCCAG...CCTCATTGTTTCGAAATCACTACGGCAAATGTAGTGTATTATGTGGGAGAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR-3UTR GCA 90 bp CAAGATCATTTCCAGCATGTCTCCATGGAGTTTTTCCATAACAACAAACACTCTGTGTGTTTGACAGACTaGACTACCCTCATGAGTGGG +
Preference number: 2 (lower is better)
Translates to: QDHFQHVSMEFFHNNKHSVCLTD*TTLMSG
Trigger: CCCACTCATGAGGGTAGTGCAGTCTGTCAAACACAC...AGAGTGTTTGTTGTTATGGAAAAACTCCATGGAGACATGCTGGAAATGATCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR-3UTR GCA 90 bp TGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTATTTATTAGTTCCAAGCGCTCCCCGATTTTaGATTCCAGCTCTCGCAAAT +
Preference number: 2 (lower is better)
Translates to: WQFCKANVKPDRMYLLVPSAPRF*IPALAN
Trigger: ATTTGCGAGAGCTGGAATGCAAAATCGGGGAGCGCT...TGGAACTAATAAATACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR-3UTR CCA 90 bp GAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTATTTATTCGCCACTGTCGTTCTaGCACTCTGCCATTGCCATC +
Preference number: 2 (lower is better)
Translates to: ENNGSSARQMLNLTVCIYSPLSF*HSAIAI
Trigger: GATGGCAATGGCAGAGTGCCAGAACGACAGTGGCGA...ATAAATACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR-3UTR CCA 90 bp GAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTATTTATCTCGTGGTCTGGGTCTaGATCTTGCATCTCGCCACT +
Preference number: 2 (lower is better)
Translates to: ENNGSSARQMLNLTVCIYLVVWV*ILHLAT
Trigger: AGTGGCGAGATGCAAGATCCAGACCCAGACCACGAG...ATAAATACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR-3UTR TCA 90 bp GCATTTAGGCTTAAGAGCACTAGGTCTTGCACAGCTAGGTGCATTGTCTTGAGTAGCTTTGTTCTCATCTaGCAGAAAATAATGGCAGTT +
Preference number: 2 (lower is better)
Translates to: AFRLKSTRSCTARCIVLSSFVLI*QKIMAV
Trigger: AACTGCCATTATTTTCTGTCAGATGAGAACAAAGCT...ACTCAAGACAATGCACCTAGCTGTGCAAGACCTAGTGCTCTTAAGCCTAAATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
3UTR-3UTR TCA 90 bp GCATTTAGGCTTAAGAGCACTAGGTCTTGCACAGCTAGGTGCATTGTCTTGAGTTGTCTCTTACCAAAATaGAGCTCCAGTAAGAAAAAC +
Preference number: 2 (lower is better)
Translates to: AFRLKSTRSCTARCIVLSCLLPK*SSSKKN
Trigger: GTTTTTCTTACTGGAGCTTCATTTTGGTAAGAGACA...ACTCAAGACAATGCACCTAGCTGTGCAAGACCTAGTGCTCTTAAGCCTAAATGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
3UTR-3UTR TCA 90 bp CTGGTTCCAGAGACAAAATTTCAGATAAAGGAATTTCCTTGTAGTACCTGCTTCCTTCCATATCATCCATaGGCCCACTGTTCCTTTCAC +
Preference number: 2 (lower is better)
Translates to: LVPETKFQIKEFPCSTCFLPYHP*AHCSFH
Trigger: GTGAAAGGAACAGTGGGCTCATGGATGATATGGAAG...GAAGCAGGTACTACAAGGAAATTCCTTTATCTGAAATTTTGTCTCTGGAACCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR-3UTR CCA 90 bp CCCTTTTCACTTGACAAGATCATTTCCAGCATGTCTCCATGGAGTTTTTCCATAGCCATCTCTGCATCTTaGACCATTGCTTCTTCCATA +
Preference number: 2 (lower is better)
Translates to: PFSLDKIISSMSPWSFSIAISAS*TIASSI
Trigger: TATGGAAGAAGCAATGGTCCAAGATGCAGAGATGGC...TATGGAAAAACTCCATGGAGACATGCTGGAAATGATCTTGTCAAGTGAAAAGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR-3UTR TCA 90 bp TGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTATTTATTAGTTCCAAGGTTGCTGAGCAGCTaGTTTTCCATAGTACAACAG +
Preference number: 2 (lower is better)
Translates to: WQFCKANVKPDRMYLLVPRLLSS*FSIVQQ
Trigger: CTGTTGTACTATGGAAAATCAGCTGCTCAGCAACCT...TGGAACTAATAAATACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331968.11
ENST00000616995.4
3UTR-3UTR TCA 90 bp GAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTATTTATCACCAACGCCACTGGTaGGAACACTGTTATTTGGTG +
Preference number: 2 (lower is better)
Translates to: ENNGSSARQMLNLTVCIYHQRHW*EHCYLV
Trigger: CACCAAATAACAGTGTTCTCACCAGTGGCGTTGGTG...ATAAATACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR-3UTR TCA 90 bp AGGCTTAAGAGCACTAGGTCTTGCACAGCTAGGTGCATTGTCTTGAGTTTAAATAGCTTTGTTCTCATCTaGCAGAAAATAATGGCAGTT +
Preference number: 2 (lower is better)
Translates to: RLKSTRSCTARCIVLSLNSFVLI*QKIMAV
Trigger: AACTGCCATTATTTTCTGTCAGATGAGAACAAAGCT...ATTTAAACTCAAGACAATGCACCTAGCTGTGCAAGACCTAGTGCTCTTAAGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
3UTR-3UTR TCA 90 bp CTGACAGAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTTACAAATGCTTCTGTTaGTTTGTCTTGGCAACTCAG +
Preference number: 2 (lower is better)
Translates to: LTENNGSSARQMLNLTVCYKCFC*FVLATQ
Trigger: CTGAGTTGCCAAGACAAATCAACAGAAGCATTTGTA...ACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTCTGTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
3UTR-3UTR TCA 90 bp CCCTTTTCACTTGACAAGATCATTTCCAGCATGTCTCCATGGAGTTTTTCCATAAGAGTTTGTTTACAATaGCAACACCAATGGGACACA +
Preference number: 2 (lower is better)
Translates to: PFSLDKIISSMSPWSFSIRVCLQ*QHQWDT
Trigger: TGTGTCCCATTGGTGTTGTCATTGTAAACAAACTCT...TATGGAAAAACTCCATGGAGACATGCTGGAAATGATCTTGTCAAGTGAAAAGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651571.1
3UTR-3UTR TCA 90 bp TGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTATTTATTAGTTCCAAGATCAATGGCTTCATaGGATATTTCCTTCCAGGGA +
Preference number: 2 (lower is better)
Translates to: WQFCKANVKPDRMYLLVPRSMAS*DISFQG
Trigger: TCCCTGGAAGGAAATATCTCATGAAGCCATTGATCT...TGGAACTAATAAATACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR-3UTR GCA 90 bp CTGACAGAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTTGGATGACAAATGTGTaGGGCACTTTAACTTTAGAC +
Preference number: 2 (lower is better)
Translates to: LTENNGSSARQMLNLTVCWMTNV*GTLTLD
Trigger: GTCTAAAGTTAAAGTGCCGCACACATTTGTCATCCA...ACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTCTGTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR-3UTR GCA 90 bp GAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTATTTATTGTGCTCTGGCAACCTaGCCTTTTCACTTGACAAGA +
Preference number: 2 (lower is better)
Translates to: ENNGSSARQMLNLTVCIYCALAT*PFHLTR
Trigger: TCTTGTCAAGTGAAAAGGGCAGGTTGCCAGAGCACA...ATAAATACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR-3UTR TCA 90 bp CTGACAGAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTAGCTTTGTTCTCATCTaGCAGAAAATAATGGCAGTT +
Preference number: 2 (lower is better)
Translates to: LTENNGSSARQMLNLTVCSFVLI*QKIMAV
Trigger: AACTGCCATTATTTTCTGTCAGATGAGAACAAAGCT...ACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTCTGTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
3UTR-3UTR TCA 90 bp GAGTTTGTTTACAATGACAACACCAATGGGACACACCAAACAGAACTACTTCACAGCTTTGTTCTCATCTaGCAGAAAATAATGGCAGTT +
Preference number: 2 (lower is better)
Translates to: EFVYNDNTNGTHQTELLHSFVLI*QKIMAV
Trigger: AACTGCCATTATTTTCTGTCAGATGAGAACAAAGCT...GTGAAGTAGTTCTGTTTGGTGTGTCCCATTGGTGTTGTCATTGTAAACAAACTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
3UTR-3UTR TCA 90 bp GAGTTTGTTTACAATGACAACACCAATGGGACACACCAAACAGAACTACTTCACTGTCTCTTACCAAAATaGAGCTCCAGTAAGAAAAAC +
Preference number: 2 (lower is better)
Translates to: EFVYNDNTNGTHQTELLHCLLPK*SSSKKN
Trigger: GTTTTTCTTACTGGAGCTTCATTTTGGTAAGAGACA...GTGAAGTAGTTCTGTTTGGTGTGTCCCATTGGTGTTGTCATTGTAAACAAACTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
3UTR-3UTR TCA 90 bp TGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTATTTATTAGTTCCACTTCCTGTGTCATTCTaGAAGAGGGTAATACATTTG +
Preference number: 2 (lower is better)
Translates to: WQFCKANVKPDRMYLLVPLPVSF*KRVIHL
Trigger: CAAATGTATTACCCTCTTTCAGAATGACACAGGAAG...TGGAACTAATAAATACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR-3UTR TCA 90 bp TGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTATTTATTAGTTCCATCATCAGGAAAAATCTaGTATACTGTGCTGATGTCC +
Preference number: 2 (lower is better)
Translates to: WQFCKANVKPDRMYLLVPSSGKI*YTVLMS
Trigger: GGACATCAGCACAGTATATCAGATTTTTCCTGATGA...TGGAACTAATAAATACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR-3UTR GCA 90 bp ATTGCTTCTTCCATATCATCCATGAGCCCACTGTTCCTTTCACTATCATTGTCATCTTGCACAGCTAGGTaGATTGTCTTGAGTTTAAAT +
Preference number: 2 (lower is better)
Translates to: IASSISSMSPLFLSLSLSSCTAR*IVLSLN
Trigger: ATTTAAACTCAAGACAATGCACCTAGCTGTGCAAGA...TGACAATGATAGTGAAAGGAACAGTGGGCTCATGGATGATATGGAAGAAGCAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651571.1
3UTR-3UTR CCA 90 bp CTGACAGAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTTCTGTTGATTTGTCTTaGCAACTCAGATACATCAAC +
Preference number: 2 (lower is better)
Translates to: LTENNGSSARQMLNLTVCSVDLS*QLRYIN
Trigger: GTTGATGTATCTGAGTTGCCAAGACAAATCAACAGA...ACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTCTGTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
3UTR-3UTR TCA 90 bp GAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTATTTATAAAAATACACAAAGGTaGAAGGTTGCTGAGCAGCTG +
Preference number: 2 (lower is better)
Translates to: ENNGSSARQMLNLTVCIYKNTQR*KVAEQL
Trigger: CAGCTGCTCAGCAACCTTTCACCTTTGTGTATTTTT...ATAAATACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331968.11
ENST00000616995.4
3UTR-3UTR TCA 90 bp GAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTATTTATACGATATTTTTAAAATaGAGGTGCCGCAAAGCCACG +
Preference number: 2 (lower is better)
Translates to: ENNGSSARQMLNLTVCIYTIFLK*RCRKAT
Trigger: CGTGGCTTTGCGGCACCTTCATTTTAAAAATATCGT...ATAAATACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR-3UTR GCA 90 bp AGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATACAAATGCTTCTGTCTGATGGTGATTTTTaGTCAAAGCCAGGACTCACA +
Preference number: 2 (lower is better)
Translates to: RELLLIQHSWSHKIQMLLSDGDF*SKPGLT
Trigger: TGTGAGTCCTGGCTTTGAGCAAAAATCACCATCAGA...CAGAAGCATTTGTATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000651616.1
3UTR-3UTR CCA 90 bp CAAGATCATTTCCAGCATGTCTCCATGGAGTTTTTCCATAACAACAAACACTCTTCTGTTGATTTGTCTTaGCAACTCAGATACATCAAC +
Preference number: 2 (lower is better)
Translates to: QDHFQHVSMEFFHNNKHSSVDLS*QLRYIN
Trigger: GTTGATGTATCTGAGTTGCCAAGACAAATCAACAGA...AGAGTGTTTGTTGTTATGGAAAAACTCCATGGAGACATGCTGGAAATGATCTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR-3UTR CCA 90 bp AGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATACAAATGCTTCTGGAAAGTCTTCAAAGGTaGCGGAAGCTTTATCTAGCA +
Preference number: 2 (lower is better)
Translates to: RELLLIQHSWSHKIQMLLESLQR*RKLYLA
Trigger: TGCTAGATAAAGCTTCCGCCACCTTTGAAGACTTTC...CAGAAGCATTTGTATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651571.1
3UTR-3UTR TCA 90 bp GAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTATTTATTACAAATGCTTCTGTTaGTTTGTCTTGGCAACTCAG +
Preference number: 2 (lower is better)
Translates to: ENNGSSARQMLNLTVCIYYKCFC*FVLATQ
Trigger: CTGAGTTGCCAAGACAAATCAACAGAAGCATTTGTA...ATAAATACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
3UTR-3UTR GCA 90 bp GAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTATTTATTGCATCTTGGACCATTaGTTCTTCCATATCATCCAT +
Preference number: 2 (lower is better)
Translates to: ENNGSSARQMLNLTVCIYCILDH*FFHIIH
Trigger: ATGGATGATATGGAAGAAGCAATGGTCCAAGATGCA...ATAAATACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR-3UTR CCA 90 bp ACACACCAAACAGAACTACTTCACAGATACATTCTGTCTCTTACCAAAATGAAGTCTGTTGATTTGTCTTaGCAACTCAGATACATCAAC +
Preference number: 2 (lower is better)
Translates to: THQTELLHRYILSLTKMKSVDLS*QLRYIN
Trigger: GTTGATGTATCTGAGTTGCCAAGACAAATCAACAGA...CTTCATTTTGGTAAGAGACAGAATGTATCTGTGAAGTAGTTCTGTTTGGTGTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
3UTR-3UTR CCA 90 bp GAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTATTTATTCCAGCATGTCTCCATaGAGTTTTTCCATAACAACA +
Preference number: 2 (lower is better)
Translates to: ENNGSSARQMLNLTVCIYSSMSP*SFSITT
Trigger: TGTTGTTATGGAAAAACTCCATGGAGACATGCTGGA...ATAAATACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR-3UTR CCA 90 bp GTTTCGTGTTTCAGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATATCTGTTGATTTGTCTTaGCAACTCAGATACATCAAC +
Preference number: 2 (lower is better)
Translates to: VSCFRELLLIQHSWSHKISVDLS*QLRYIN
Trigger: GTTGATGTATCTGAGTTGCCAAGACAAATCAACAGA...TATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCTGAAACACGAAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
3UTR-3UTR CCA 90 bp TCGTGTTTCAGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATACAATCTGTTGATTTGTCTTaGCAACTCAGATACATCAAC +
Preference number: 2 (lower is better)
Translates to: SCFRELLLIQHSWSHKIQSVDLS*QLRYIN
Trigger: GTTGATGTATCTGAGTTGCCAAGACAAATCAACAGA...TTGTATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCTGAAACACGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
3UTR TCA 72 bp GACCTCAGGAGCCAGGTAAGCGGGGGTACCCACCACTaGCCTCCGGAAAGACTTCTCTCCAATGATCCGGGC +
Preference number: 3 (lower is better)
Translates to: DLRSQVSGGTHH*PPERLLSNDPG
Trigger: GCCCGGATCATTGGAGAGAAGTCTTTCCGGAGGTCAGTGGTGGGTACCCCCGCTTACCTGGCTCCTGAGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR GCA 72 bp TGGCTAGCACTTGGATTGATCAGGTGTGTGGGGTACTaGAGCCCCTGCTCGCCTGCATACTTCTCCCACCTC +
Preference number: 3 (lower is better)
Translates to: WLALGLIRCVGY*SPCSPAYFSHL
Trigger: GAGGTGGGAGAAGTATGCAGGCGAGCAGGGGCTGCAGTACCCCACACACCTGATCAATCCAAGTGCTAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR TCA 72 bp TGTGCGGATGGTGCTGACCCCAGTGAGGGAAACGTTTaGGAGCCTTCTCCGCCTCACACCGCTGCAATTGTT +
Preference number: 3 (lower is better)
Translates to: CADGADPSEGNV*EPSPPHTAAIV
Trigger: AACAATTGCAGCGGTGTGAGGCGGAGAAGGCTCTCAAACGTTTCCCTCACTGGGGTCAGCACCATCCGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651571.1
3UTR GCA 72 bp GTTCTGTTGGCGTCCTCGTGGTCTGGGTCTGGATCTTaGATCTCGCCACTGTCGTTCTGGCACTCTGCCATT +
Preference number: 3 (lower is better)
Translates to: VLLASSWSGSGS*ISPLSFWHSAI
Trigger: AATGGCAGAGTGCCAGAACGACAGTGGCGAGATGCAAGATCCAGACCCAGACCACGAGGACGCCAACAGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR GCA 72 bp CTTGGATTGATCAGGTGTGTGGGGTACTGCAGCCCCTaGTCGCCTGCATACTTCTCCCACCTCAGGTCATCA +
Preference number: 3 (lower is better)
Translates to: LGLIRCVGYCSP*SPAYFSHLRSS
Trigger: TGATGACCTGAGGTGGGAGAAGTATGCAGGCGAGCAGGGGCTGCAGTACCCCACACACCTGATCAATCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR CCA 72 bp ACTGATGGTTCTGTTGGCGTCCTCGTGGTCTGGGTCTaGATCTTGCATCTCGCCACTGTCGTTCTGGCACTC +
Preference number: 3 (lower is better)
Translates to: TDGSVGVLVVWV*ILHLATVVLAL
Trigger: GAGTGCCAGAACGACAGTGGCGAGATGCAAGATCCAGACCCAGACCACGAGGACGCCAACAGAACCATCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR-3UTR CAA 90 bp AGTCCTGTAGCCAAGGGTGGCTCAAGGTCTTATCCACACTGTAGCGCTTTCTCAGGACTGATGGTTCTGTaGGCGTCCTCGTGGTCTGGG +
Preference number: 3 (lower is better)
Translates to: SPVAKGGSRSYPHCSAFSGLMVL*ASSWSG
Trigger: CCCAGACCACGAGGACGCCAACAGAACCATCAGTCC...TGAGAAAGCGCTACAGTGTGGATAAGACCTTGAGCCACCCTTGGCTACAGGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR-3UTR CAA 90 bp ACCGAGGGCTTTCATTTCTGTTTCTTCAGTCTCAGGAGTGTCACTGTGGCTAGCCCCACGGAGGAGCCCTaGGGAATGACGGGCATAAGG +
Preference number: 3 (lower is better)
Translates to: TEGFHFCFFSLRSVTVASPTEEP*GMTGIR
Trigger: CCTTATGCCCGTCATTCCCAAGGGCTCCTCCGTGGG...GCTAGCCACAGTGACACTCCTGAGACTGAAGAAACAGAAATGAAAGCCCTCGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR CCA 72 bp TCTGGGTCTGGATCTTGCATCTCGCCACTGTCGTTCTaGCACTCTGCCATTGCCATCTCTGCATCTTGGACC +
Preference number: 3 (lower is better)
Translates to: SGSGSCISPLSF*HSAIAISASWT
Trigger: GGTCCAAGATGCAGAGATGGCAATGGCAGAGTGCCAGAACGACAGTGGCGAGATGCAAGATCCAGACCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR CCA 72 bp CTTGTTGATGGACTGATGGTTCTGTTGGCGTCCTCGTaGTCTGGGTCTGGATCTTGCATCTCGCCACTGTCG +
Preference number: 3 (lower is better)
Translates to: LVDGLMVLLASS*SGSGSCISPLS
Trigger: CGACAGTGGCGAGATGCAAGATCCAGACCCAGACCACGAGGACGCCAACAGAACCATCAGTCCATCAACAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR-3UTR CAA 90 bp TTGGTTCCTGTACCCACGGAGGAGCCCTTGGGAATGACGGGCATAAGGGCATGCCTGCATCTTGGACCATaGCTTCTTCCATATCATCCA +
Preference number: 3 (lower is better)
Translates to: LVPVPTEEPLGMTGIRACLHLGP*LLPYHP
Trigger: TGGATGATATGGAAGAAGCAATGGTCCAAGATGCAG...GCATGCCCTTATGCCCGTCATTCCCAAGGGCTCCTCCGTGGGTACAGGAACCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR-3UTR CAA 90 bp GTGCAAGTTGGTTCCTGTACCCACGGAGGAGCCCTTGGGAATGACGGGCATAAGTGCCATCTCTGCATCTaGGACCATTGCTTCTTCCAT +
Preference number: 3 (lower is better)
Translates to: VQVGSCTHGGALGNDGHKCHLCI*DHCFFH
Trigger: ATGGAAGAAGCAATGGTCCAAGATGCAGAGATGGCA...CTTATGCCCGTCATTCCCAAGGGCTCCTCCGTGGGTACAGGAACCAACTTGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR-3UTR CAA 90 bp ACCGAGGGCTTTCATTTCTGTTTCTTCAGTCTCAGGAGTGTCACTGTGGCTAGCGTCTGGGTCTGGATCTaGCATCTCGCCACTGTCGTT +
Preference number: 3 (lower is better)
Translates to: TEGFHFCFFSLRSVTVASVWVWI*HLATVV
Trigger: AACGACAGTGGCGAGATGCAAGATCCAGACCCAGAC...GCTAGCCACAGTGACACTCCTGAGACTGAAGAAACAGAAATGAAAGCCCTCGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR-3UTR CAA 90 bp GGCATAAGGGCATGCTGGATGGCTATCTCCCACATCCTGGCCACATCTGCACCAAAGAAAAACACTGATTaGCAAAGGCACAGTGGAGAC +
Preference number: 3 (lower is better)
Translates to: GIRACWMAISHILATSAPKKNTD*QRHSGD
Trigger: GTCTCCACTGTGCCTTTGCAAATCAGTGTTTTTCTT...TGGTGCAGATGTGGCCAGGATGTGGGAGATAGCCATCCAGCATGCCCTTATGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651571.1
3UTR GCA 72 bp TTGCATCTCGCCACTGTCGTTCTGGCACTCTGCCATTaGCATCTCTGCATCTTGGACCATTGCTTCTTCCAT +
Preference number: 3 (lower is better)
Translates to: LHLATVVLALCH*HLCILDHCFFH
Trigger: ATGGAAGAAGCAATGGTCCAAGATGCAGAGATGGCAATGGCAGAGTGCCAGAACGACAGTGGCGAGATGCAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR TCA 72 bp TGCACCAACGCCACTGGTGAGAACACTGTTATTTGGTaGTGGGCTGGAAGGATTGACCACATTTTCTCCCAC +
Preference number: 3 (lower is better)
Translates to: CTNATGENTVIW*WAGRIDHIFSH
Trigger: GTGGGAGAAAATGTGGTCAATCCTTCCAGCCCATCACCAAATAACAGTGTTCTCACCAGTGGCGTTGGTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR GCA 72 bp GTCATCACTCCCTTCTTCCATGACCACATCAGACTCTaGCCCAGGGCTAAGCAAATCTCCATTAATGGTCAC +
Preference number: 3 (lower is better)
Translates to: VITPFFHDHIRL*PRAKQISINGH
Trigger: GTGACCATTAATGGAGATTTGCTTAGCCCTGGGGCAGAGTCTGATGTGGTCATGGAAGAAGGGAGTGATGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR GCA 72 bp GCCACTGTCGTTCTGGCACTCTGCCATTGCCATCTCTaGATCTTGGACCATTGCTTCTTCCATATCATCCAT +
Preference number: 3 (lower is better)
Translates to: ATVVLALCHCHL*ILDHCFFHIIH
Trigger: ATGGATGATATGGAAGAAGCAATGGTCCAAGATGCAGAGATGGCAATGGCAGAGTGCCAGAACGACAGTGGC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR CCA 72 bp TCGTTCTGGCACTCTGCCATTGCCATCTCTGCATCTTaGACCATTGCTTCTTCCATATCATCCATGAGCCCA +
Preference number: 3 (lower is better)
Translates to: SFWHSAIAISAS*TIASSISSMSP
Trigger: TGGGCTCATGGATGATATGGAAGAAGCAATGGTCCAAGATGCAGAGATGGCAATGGCAGAGTGCCAGAACGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR-3UTR CAA 90 bp GTCTGGGTCTGGATCTTGCATCTCGCCACTGTCGTTCTGGCACTCTGCCATTGCTGTTTCAGGGAACTTTaGTTAATACAACACAGTTGG +
Preference number: 3 (lower is better)
Translates to: VWVWILHLATVVLALCHCCFREL*LIQHSW
Trigger: CCAACTGTGTTGTATTAACAAAAGTTCCCTGAAACA...GCAATGGCAGAGTGCCAGAACGACAGTGGCGAGATGCAAGATCCAGACCCAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR-3UTR CAA 90 bp AGTCTCAGGAGTGTCACTGTGGCTAGCACTTGGATTGATCAGGTGTGTGGGGTATTCCTTTCACTATCATaGTCATCACTCCCTTCTTCC +
Preference number: 3 (lower is better)
Translates to: SLRSVTVASTWIDQVCGVFLSLS*SSLPSS
Trigger: GGAAGAAGGGAGTGATGACAATGATAGTGAAAGGAA...TACCCCACACACCTGATCAATCCAAGTGCTAGCCACAGTGACACTCCTGAGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR-3UTR CAA 90 bp AGTCCTGTAGCCAAGGGTGGCTCAAGGTCTTATCCACACTGTAGCGCTTTCTCATGTATGATTGAGAATTaGACCTCTTCTCTCGACCAA +
Preference number: 3 (lower is better)
Translates to: SPVAKGGSRSYPHCSAFSCMIEN*TSSLDQ
Trigger: TTGGTCGAGAGAAGAGGTCAAATTCTCAATCATACA...TGAGAAAGCGCTACAGTGTGGATAAGACCTTGAGCCACCCTTGGCTACAGGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR CCA 72 bp AGGCAGTTGTTTGGTACTTTCGGTGCACAACGTTTATaGCAGTTGAATCTGCAATCTTTGCACTGCAAGCCC +
Preference number: 3 (lower is better)
Translates to: RQLFGTFGAQRL*QLNLQSLHCKP
Trigger: GGGCTTGCAGTGCAAAGATTGCAGATTCAACTGCCATAAACGTTGTGCACCGAAAGTACCAAACAACTGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR CCA 72 bp TTCATTTCTGTTTCTTCAGTCTCAGGAGTGTCACTGTaGCTAGCACTTGGATTGATCAGGTGTGTGGGGTAC +
Preference number: 3 (lower is better)
Translates to: FISVSSVSGVSL*LALGLIRCVGY
Trigger: GTACCCCACACACCTGATCAATCCAAGTGCTAGCCACAGTGACACTCCTGAGACTGAAGAAACAGAAATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR-3UTR CAA 90 bp ATTGCTTCTTCCATATCATCCATGAGCCCACTGTTCCTTTCACTATCATTGTCACGCCAAGGCAGTTGTTaGGTACTTTCGGTGCACAAC +
Preference number: 3 (lower is better)
Translates to: IASSISSMSPLFLSLSLSRQGSC*VLSVHN
Trigger: GTTGTGCACCGAAAGTACCAAACAACTGCCTTGGCG...TGACAATGATAGTGAAAGGAACAGTGGGCTCATGGATGATATGGAAGAAGCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR-3UTR CAA 90 bp GCATTTAGGCTTAAGAGCACTAGGTCTTGCACAGCTAGGTGCATTGTCTTGAGTCTCACACCGCTGCAATaGTTGGGTATTTTAAATGCA +
Preference number: 3 (lower is better)
Translates to: AFRLKSTRSCTARCIVLSLTPLQ*LGILNA
Trigger: TGCATTTAAAATACCCAACAATTGCAGCGGTGTGAG...ACTCAAGACAATGCACCTAGCTGTGCAAGACCTAGTGCTCTTAAGCCTAAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651571.1
3UTR-3UTR CAA 90 bp CTGGTTCCAGAGACAAAATTTCAGATAAAGGAATTTCCTTGTAGTACCTGCTTCCGCCAAGGCAGTTGTTaGGTACTTTCGGTGCACAAC +
Preference number: 3 (lower is better)
Translates to: LVPETKFQIKEFPCSTCFRQGSC*VLSVHN
Trigger: GTTGTGCACCGAAAGTACCAAACAACTGCCTTGGCG...GAAGCAGGTACTACAAGGAAATTCCTTTATCTGAAATTTTGTCTCTGGAACCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR-3UTR CAA 90 bp CAAGATCATTTCCAGCATGTCTCCATGGAGTTTTTCCATAACAACAAACACTCTTCTGGCACTCTGCCATaGCCATCTCTGCATCTTGGA +
Preference number: 3 (lower is better)
Translates to: QDHFQHVSMEFFHNNKHSSGTLP*PSLHLG
Trigger: TCCAAGATGCAGAGATGGCAATGGCAGAGTGCCAGA...AGAGTGTTTGTTGTTATGGAAAAACTCCATGGAGACATGCTGGAAATGATCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR-3UTR CAA 90 bp TGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTATTTATTAGTTCCAGATGGGCTGGAAGGATaGACCACATTTTCTCCCACA +
Preference number: 3 (lower is better)
Translates to: WQFCKANVKPDRMYLLVPDGLEG*TTFSPT
Trigger: TGTGGGAGAAAATGTGGTCAATCCTTCCAGCCCATC...TGGAACTAATAAATACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR-3UTR CAA 90 bp TTAATGGTCACTTCGCCAAGGCAGTTGTTTGGTACTTTCGGTGCACAACGTTTAAATGCTTCTGTTGATTaGTCTTGGCAACTCAGATAC +
Preference number: 3 (lower is better)
Translates to: LMVTSPRQLFGTFGAQRLNASVD*SWQLRY
Trigger: GTATCTGAGTTGCCAAGACAAATCAACAGAAGCATT...TAAACGTTGTGCACCGAAAGTACCAAACAACTGCCTTGGCGAAGTGACCATTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR-3UTR CAA 90 bp ATCTCTGCATCTTGGACCATTGCTTCTTCCATATCATCCATGAGCCCACTGTTCTGTTTCAGGGAACTTTaGTTAATACAACACAGTTGG +
Preference number: 3 (lower is better)
Translates to: ISASWTIASSISSMSPLFCFREL*LIQHSW
Trigger: CCAACTGTGTTGTATTAACAAAAGTTCCCTGAAACA...GAACAGTGGGCTCATGGATGATATGGAAGAAGCAATGGTCCAAGATGCAGAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR-3UTR CAA 90 bp GAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTATTTATCCCTTCAGAAGCTTCTaGCAGTACTGGCACACTGTG +
Preference number: 3 (lower is better)
Translates to: ENNGSSARQMLNLTVCIYPFRSF*QYWHTV
Trigger: CACAGTGTGCCAGTACTGCAAGAAGCTTCTGAAGGG...ATAAATACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR-3UTR CAA 90 bp ATTTTCTCCCACATAATACACTACATTTGCCGTAGTGATTTCGAAACAATGAGGTTGAATCTGCAATCTTaGCACTGCAAGCCCTGCCTG +
Preference number: 3 (lower is better)
Translates to: IFSHIIHYICRSDFETMRLNLQS*HCKPCL
Trigger: CAGGCAGGGCTTGCAGTGCAAAGATTGCAGATTCAA...CCTCATTGTTTCGAAATCACTACGGCAAATGTAGTGTATTATGTGGGAGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR CCA 72 bp AATGGCTTCATGAGATATTTCCTTCCAGGGATTTGGTaGATACATGAAAGCTGCATTCTGAATTTGGTCGTG +
Preference number: 3 (lower is better)
Translates to: NGFMRYFLPGIW*IHESCILNLVV
Trigger: CACGACCAAATTCAGAATGCAGCTTTCATGTATCCACCAAATCCCTGGAAGGAAATATCTCATGAAGCCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR-3UTR CAA 90 bp CTGACAGAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTAAGAAAAACACTGATTaGCAAAGGCACAGTGGAGAC +
Preference number: 3 (lower is better)
Translates to: LTENNGSSARQMLNLTVCKKNTD*QRHSGD
Trigger: GTCTCCACTGTGCCTTTGCAAATCAGTGTTTTTCTT...ACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTCTGTCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
3UTR-3UTR CAA 90 bp GAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTATTTATTTCACATTTAAGACCTaGACGTACCAGCCCCCACAG +
Preference number: 3 (lower is better)
Translates to: ENNGSSARQMLNLTVCIYFTFKT*TYQPPQ
Trigger: CTGTGGGGGCTGGTACGTCAAGGTCTTAAATGTGAA...ATAAATACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651571.1
3UTR-3UTR CAA 90 bp GAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTATTTATTTCCTCTTCGTGTGTTaGACAGACTGCACTACCCTC +
Preference number: 3 (lower is better)
Translates to: ENNGSSARQMLNLTVCIYFLFVC*TDCTTL
Trigger: GAGGGTAGTGCAGTCTGTCAAACACACGAAGAGGAA...ATAAATACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR-3UTR CAA 90 bp CCCTTTTCACTTGACAAGATCATTTCCAGCATGTCTCCATGGAGTTTTTCCATAGAAGGTTCTGTAGAATaGCAACCTCATTACGAAGCT +
Preference number: 3 (lower is better)
Translates to: PFSLDKIISSMSPWSFSIEGSVE*QPHYEA
Trigger: AGCTTCGTAATGAGGTTGCAATTCTACAGAACCTTC...TATGGAAAAACTCCATGGAGACATGCTGGAAATGATCTTGTCAAGTGAAAAGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR-3UTR CAA 90 bp CTGACAGAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTAATGCTTCTGTTGATTaGTCTTGGCAACTCAGATAC +
Preference number: 3 (lower is better)
Translates to: LTENNGSSARQMLNLTVCNASVD*SWQLRY
Trigger: GTATCTGAGTTGCCAAGACAAATCAACAGAAGCATT...ACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTCTGTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
3UTR-3UTR CAA 90 bp TGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTATTTATTAGTTCCAAAGAAAAACACTGATTaGCAAAGGCACAGTGGAGAC +
Preference number: 3 (lower is better)
Translates to: WQFCKANVKPDRMYLLVPKKNTD*QRHSGD
Trigger: GTCTCCACTGTGCCTTTGCAAATCAGTGTTTTTCTT...TGGAACTAATAAATACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
3UTR-3UTR CAA 90 bp TGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTATTTATTAGTTCCAAATGCTTCTGTTGATTaGTCTTGGCAACTCAGATAC +
Preference number: 3 (lower is better)
Translates to: WQFCKANVKPDRMYLLVPNASVD*SWQLRY
Trigger: GTATCTGAGTTGCCAAGACAAATCAACAGAAGCATT...TGGAACTAATAAATACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
3UTR-3UTR CAA 90 bp CAAGATCATTTCCAGCATGTCTCCATGGAGTTTTTCCATAACAACAAACACTCTTGTATGATTGAGAATTaGACCTCTTCTCTCGACCAA +
Preference number: 3 (lower is better)
Translates to: QDHFQHVSMEFFHNNKHSCMIEN*TSSLDQ
Trigger: TTGGTCGAGAGAAGAGGTCAAATTCTCAATCATACA...AGAGTGTTTGTTGTTATGGAAAAACTCCATGGAGACATGCTGGAAATGATCTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR-3UTR CAA 90 bp CAAGATCATTTCCAGCATGTCTCCATGGAGTTTTTCCATAACAACAAACACTCTTCTTGTCAAGGTGAATaGGTCGTCCAATGTATGATT +
Preference number: 3 (lower is better)
Translates to: QDHFQHVSMEFFHNNKHSSCQGE*VVQCMI
Trigger: AATCATACATTGGACGACCAATTCACCTTGACAAGA...AGAGTGTTTGTTGTTATGGAAAAACTCCATGGAGACATGCTGGAAATGATCTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR-3UTR CAA 90 bp ATTTTCTCCCACATAATACACTACATTTGCCGTAGTGATTTCGAAACAATGAGGAATGCTTCTGTTGATTaGTCTTGGCAACTCAGATAC +
Preference number: 3 (lower is better)
Translates to: IFSHIIHYICRSDFETMRNASVD*SWQLRY
Trigger: GTATCTGAGTTGCCAAGACAAATCAACAGAAGCATT...CCTCATTGTTTCGAAATCACTACGGCAAATGTAGTGTATTATGTGGGAGAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR-3UTR CAA 90 bp GAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTATTTATTTCCTTTCACTATCATaGTCATCACTCCCTTCTTCC +
Preference number: 3 (lower is better)
Translates to: ENNGSSARQMLNLTVCIYFLSLS*SSLPSS
Trigger: GGAAGAAGGGAGTGATGACAATGATAGTGAAAGGAA...ATAAATACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR GCA 72 bp ATTTCTAAGGCATTTAGGCTTAAGAGCACTAGGTCTTaGACAGCTAGGTGCATTGTCTTGAGTTTAAATATA +
Preference number: 3 (lower is better)
Translates to: ISKAFRLKSTRS*TARCIVLSLNI
Trigger: TATATTTAAACTCAAGACAATGCACCTAGCTGTGCAAGACCTAGTGCTCTTAAGCCTAAATGCCTTAGAAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
3UTR-3UTR CAA 90 bp GAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTATTTATAATGCTTCTGTTGATTaGTCTTGGCAACTCAGATAC +
Preference number: 3 (lower is better)
Translates to: ENNGSSARQMLNLTVCIYNASVD*SWQLRY
Trigger: GTATCTGAGTTGCCAAGACAAATCAACAGAAGCATT...ATAAATACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
3UTR-3UTR CAA 90 bp ACACACCAAACAGAACTACTTCACAGATACATTCTGTCTCTTACCAAAATGAAGTGTTTCAGGGAACTTTaGTTAATACAACACAGTTGG +
Preference number: 3 (lower is better)
Translates to: THQTELLHRYILSLTKMKCFREL*LIQHSW
Trigger: CCAACTGTGTTGTATTAACAAAAGTTCCCTGAAACA...CTTCATTTTGGTAAGAGACAGAATGTATCTGTGAAGTAGTTCTGTTTGGTGTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
3UTR-3UTR CAA 90 bp GAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTATTTATTGTTTCAGGGAACTTTaGTTAATACAACACAGTTGG +
Preference number: 3 (lower is better)
Translates to: ENNGSSARQMLNLTVCIYCFREL*LIQHSW
Trigger: CCAACTGTGTTGTATTAACAAAAGTTCCCTGAAACA...ATAAATACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
3UTR CCA 72 bp GTCACACAAAATACAAATGCTTCTGTTGATTTGTCTTaGCAACTCAGATACATCAACAGTGCTAACAGTTTA +
Preference number: 3 (lower is better)
Translates to: VTQNTNASVDLS*QLRYINSANSL
Trigger: TAAACTGTTAGCACTGTTGATGTATCTGAGTTGCCAAGACAAATCAACAGAAGCATTTGTATTTTGTGTGAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR GCA 90 bp TGTACCCACGGAGGAGCCCTTGGGAATGACGGGCATAAGGGCATGCTGGATGGCCAGCCCCTGCTCGCCTaGATACTTCTCCCACCTCAG +
Preference number: 4 (lower is better)
Translates to: CTHGGALGNDGHKGMLDGQPLLA*ILLPPQ
Trigger: CTGAGGTGGGAGAAGTATGCAGGCGAGCAGGGGCTG...GCCATCCAGCATGCCCTTATGCCCGTCATTCCCAAGGGCTCCTCCGTGGGTACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp TTGGTTCCTGTACCCACGGAGGAGCCCTTGGGAATGACGGGCATAAGGGCATGCGAACTCAGAGGATGCTaGCACGCTCACCGAGGGCTT +
Preference number: 4 (lower is better)
Translates to: LVPVPTEEPLGMTGIRACELRGC*HAHRGL
Trigger: AAGCCCTCGGTGAGCGTGTCAGCATCCTCTGAGTTC...GCATGCCCTTATGCCCGTCATTCCCAAGGGCTCCTCCGTGGGTACAGGAACCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR GCA 90 bp GTCTGGGTCTGGATCTTGCATCTCGCCACTGTCGTTCTGGCACTCTGCCATTGCGGGTACTGCAGCCCCTaGTCGCCTGCATACTTCTCC +
Preference number: 4 (lower is better)
Translates to: VWVWILHLATVVLALCHCGYCSP*SPAYFS
Trigger: GGAGAAGTATGCAGGCGAGCAGGGGCTGCAGTACCC...GCAATGGCAGAGTGCCAGAACGACAGTGGCGAGATGCAAGATCCAGACCCAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp TTGGTTCCTGTACCCACGGAGGAGCCCTTGGGAATGACGGGCATAAGGGCATGCACTGCAAGCCCTGCCTaGAAAGCCCCTTCAGAAGCT +
Preference number: 4 (lower is better)
Translates to: LVPVPTEEPLGMTGIRACTASPA*KAPSEA
Trigger: AGCTTCTGAAGGGGCTTTTCAGGCAGGGCTTGCAGT...GCATGCCCTTATGCCCGTCATTCCCAAGGGCTCCTCCGTGGGTACAGGAACCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CCA 90 bp GTGCAAGTTGGTTCCTGTACCCACGGAGGAGCCCTTGGGAATGACGGGCATAAGAGCTTCTTGCAGTACTaGCACACTGTGGGCCGGGTG +
Preference number: 4 (lower is better)
Translates to: VQVGSCTHGGALGNDGHKSFLQY*HTVGRV
Trigger: CACCCGGCCCACAGTGTGCCAGTACTGCAAGAAGCT...CTTATGCCCGTCATTCCCAAGGGCTCCTCCGTGGGTACAGGAACCAACTTGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CCA 90 bp TTGGTTCCTGTACCCACGGAGGAGCCCTTGGGAATGACGGGCATAAGGGCATGCTCGCCACTGTCGTTCTaGCACTCTGCCATTGCCATC +
Preference number: 4 (lower is better)
Translates to: LVPVPTEEPLGMTGIRACSPLSF*HSAIAI
Trigger: GATGGCAATGGCAGAGTGCCAGAACGACAGTGGCGA...GCATGCCCTTATGCCCGTCATTCCCAAGGGCTCCTCCGTGGGTACAGGAACCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR CAA 72 bp GGTTCTGTTGGCGTCCTCGTGGTCTGGGTCTGGATCTaGCATCTCGCCACTGTCGTTCTGGCACTCTGCCAT +
Preference number: 4 (lower is better)
Translates to: GSVGVLVVWVWI*HLATVVLALCH
Trigger: ATGGCAGAGTGCCAGAACGACAGTGGCGAGATGCAAGATCCAGACCCAGACCACGAGGACGCCAACAGAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp GTCTGGGTCTGGATCTTGCATCTCGCCACTGTCGTTCTGGCACTCTGCCATTGCAGTGAGGGAAACGTTTaGGAGCCTTCTCCGCCTCAC +
Preference number: 4 (lower is better)
Translates to: VWVWILHLATVVLALCHCSEGNV*EPSPPH
Trigger: GTGAGGCGGAGAAGGCTCTCAAACGTTTCCCTCACT...GCAATGGCAGAGTGCCAGAACGACAGTGGCGAGATGCAAGATCCAGACCCAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp TTGGTTCCTGTACCCACGGAGGAGCCCTTGGGAATGACGGGCATAAGGGCATGCAGAGAGTTCAGCAGATaGTGTGCGGATGGTGCTGAC +
Preference number: 4 (lower is better)
Translates to: LVPVPTEEPLGMTGIRACREFSR*CADGAD
Trigger: GTCAGCACCATCCGCACATCATCTGCTGAACTCTCT...GCATGCCCTTATGCCCGTCATTCCCAAGGGCTCCTCCGTGGGTACAGGAACCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR GCA 90 bp AGAGATATCTCTGTGCAAGTTGGTTCCTGTACCCACGGAGGAGCCCTTGGGAATAGGTGTGTGGGGTACTaGAGCCCCTGCTCGCCTGCA +
Preference number: 4 (lower is better)
Translates to: RDISVQVGSCTHGGALGNRCVGY*SPCSPA
Trigger: TGCAGGCGAGCAGGGGCTGCAGTACCCCACACACCT...ATTCCCAAGGGCTCCTCCGTGGGTACAGGAACCAACTTGCACAGAGATATCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CCA 90 bp GTGCAAGTTGGTTCCTGTACCCACGGAGGAGCCCTTGGGAATGACGGGCATAAGCTCGTGGTCTGGGTCTaGATCTTGCATCTCGCCACT +
Preference number: 4 (lower is better)
Translates to: VQVGSCTHGGALGNDGHKLVVWV*ILHLAT
Trigger: AGTGGCGAGATGCAAGATCCAGACCCAGACCACGAG...CTTATGCCCGTCATTCCCAAGGGCTCCTCCGTGGGTACAGGAACCAACTTGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CCA 90 bp TGTTGGCGTCCTCGTGGTCTGGGTCTGGATCTTGCATCTCGCCACTGTCGTTCTGCAGCGTGTCCTTGCTaGTGTAGTGGACCATCCATC +
Preference number: 4 (lower is better)
Translates to: CWRPRGLGLDLASRHCRSAACPC*CSGPSI
Trigger: GATGGATGGTCCACTACACCAGCAAGGACACGCTGC...AGAACGACAGTGGCGAGATGCAAGATCCAGACCCAGACCACGAGGACGCCAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CCA 90 bp TGTACCCACGGAGGAGCCCTTGGGAATGACGGGCATAAGGGCATGCTGGATGGCTATCTCTGTGCAAGTTaGTTCCTGTACCCACGGAGG +
Preference number: 4 (lower is better)
Translates to: CTHGGALGNDGHKGMLDGYLCAS*FLYPRR
Trigger: CCTCCGTGGGTACAGGAACCAACTTGCACAGAGATA...GCCATCCAGCATGCCCTTATGCCCGTCATTCCCAAGGGCTCCTCCGTGGGTACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR CAA 72 bp TCAGTCTCAGGAGTGTCACTGTGGCTAGCACTTGGATaGATCAGGTGTGTGGGGTACTGCAGCCCCTGCTCG +
Preference number: 4 (lower is better)
Translates to: SVSGVSLWLALG*IRCVGYCSPCS
Trigger: CGAGCAGGGGCTGCAGTACCCCACACACCTGATCAATCCAAGTGCTAGCCACAGTGACACTCCTGAGACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR GCA 90 bp TGTTGGCGTCCTCGTGGTCTGGGTCTGGATCTTGCATCTCGCCACTGTCGTTCTGACCACATCAGACTCTaGCCCAGGGCTAAGCAAATC +
Preference number: 4 (lower is better)
Translates to: CWRPRGLGLDLASRHCRSDHIRL*PRAKQI
Trigger: GATTTGCTTAGCCCTGGGGCAGAGTCTGATGTGGTC...AGAACGACAGTGGCGAGATGCAAGATCCAGACCCAGACCACGAGGACGCCAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR GCA 90 bp TGTTGGCGTCCTCGTGGTCTGGGTCTGGATCTTGCATCTCGCCACTGTCGTTCTGTCGTTCTGGCACTCTaGCATTGCCATCTCTGCATC +
Preference number: 4 (lower is better)
Translates to: CWRPRGLGLDLASRHCRSVVLAL*HCHLCI
Trigger: GATGCAGAGATGGCAATGGCAGAGTGCCAGAACGAC...AGAACGACAGTGGCGAGATGCAAGATCCAGACCCAGACCACGAGGACGCCAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR GCA 90 bp GCTATCCAATCTCCAATAGTGCCGTTTCCGCAGCGTGTCCTTGCTGGTGTAGTGCATCCTGGCCACATCTaGACCAACGCCACTGGTGAG +
Preference number: 4 (lower is better)
Translates to: AIQSPIVPFPQRVLAGVVHPGHI*TNATGE
Trigger: CTCACCAGTGGCGTTGGTGCAGATGTGGCCAGGATG...CACTACACCAGCAAGGACACGCTGCGGAAACGGCACTATTGGAGATTGGATAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CCA 90 bp GTGCAAGTTGGTTCCTGTACCCACGGAGGAGCCCTTGGGAATGACGGGCATAAGGGCATAAGGGCATGCTaGATGGCTATCTCCCACATC +
Preference number: 4 (lower is better)
Translates to: VQVGSCTHGGALGNDGHKGIRAC*MAISHI
Trigger: GATGTGGGAGATAGCCATCCAGCATGCCCTTATGCC...CTTATGCCCGTCATTCCCAAGGGCTCCTCCGTGGGTACAGGAACCAACTTGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp GAGTTTGTTTACAATGACAACACCAATGGGACACACCAAACAGAACTACTTCACGAGGCGGGAGGACTCTaGGGCCCGGAACGCGGCAGC +
Preference number: 4 (lower is better)
Translates to: EFVYNDNTNGTHQTELLHEAGGL*GPERGS
Trigger: GCTGCCGCGTTCCGGGCCTCAGAGTCCTCCCGCCTC...GTGAAGTAGTTCTGTTTGGTGTGTCCCATTGGTGTTGTCATTGTAAACAAACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331968.11
CDS-3UTR TCA 90 bp TGTTGGCGTCCTCGTGGTCTGGGTCTGGATCTTGCATCTCGCCACTGTCGTTCTGGAGCTCTGTATGAATaGACAAAGAGAGCGTGGGGA +
Preference number: 4 (lower is better)
Translates to: CWRPRGLGLDLASRHCRSGALYE*TKRAWG
Trigger: TCCCCACGCTCTCTTTGTTCATTCATACAGAGCTCC...AGAACGACAGTGGCGAGATGCAAGATCCAGACCCAGACCACGAGGACGCCAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp GTCTGGATCTTGCATCTCGCCACTGTCGTTCTGGCACTCTGCCATTGCCATCTCTCACATTTAAGACCTTaGCGTACCAGCCCCCACAGC +
Preference number: 4 (lower is better)
Translates to: VWILHLATVVLALCHCHLSHLRP*RTSPHS
Trigger: GCTGTGGGGGCTGGTACGTCAAGGTCTTAAATGTGA...GAGATGGCAATGGCAGAGTGCCAGAACGACAGTGGCGAGATGCAAGATCCAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR GCA 90 bp GTGCAAGTTGGTTCCTGTACCCACGGAGGAGCCCTTGGGAATGACGGGCATAAGCTGCAATCTTTGCACTaGAAGCCCTGCCTGAAAAGC +
Preference number: 4 (lower is better)
Translates to: VQVGSCTHGGALGNDGHKLQSLH*KPCLKS
Trigger: GCTTTTCAGGCAGGGCTTGCAGTGCAAAGATTGCAG...CTTATGCCCGTCATTCCCAAGGGCTCCTCCGTGGGTACAGGAACCAACTTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR GCA 90 bp CACAGAGATATCTCTGTGCAAGTTGGTTCCTGTACCCACGGAGGAGCCCTTGGGTCTGGGTCTGGATCTTaGATCTCGCCACTGTCGTTC +
Preference number: 4 (lower is better)
Translates to: HRDISVQVGSCTHGGALGSGSGS*ISPLSF
Trigger: GAACGACAGTGGCGAGATGCAAGATCCAGACCCAGA...CCCAAGGGCTCCTCCGTGGGTACAGGAACCAACTTGCACAGAGATATCTCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR GCA 90 bp AGAGATATCTCTGTGCAAGTTGGTTCCTGTACCCACGGAGGAGCCCTTGGGAATCATCCTGGCCACATCTaGACCAACGCCACTGGTGAG +
Preference number: 4 (lower is better)
Translates to: RDISVQVGSCTHGGALGNHPGHI*TNATGE
Trigger: CTCACCAGTGGCGTTGGTGCAGATGTGGCCAGGATG...ATTCCCAAGGGCTCCTCCGTGGGTACAGGAACCAACTTGCACAGAGATATCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR GCA 90 bp ATCTTGCATCTCGCCACTGTCGTTCTGGCACTCTGCCATTGCCATCTCTGCATCACGGGCATAAGGGCATaGTGGATGGCTATCTCCCAC +
Preference number: 4 (lower is better)
Translates to: ILHLATVVLALCHCHLCITGIRA*WMAISH
Trigger: GTGGGAGATAGCCATCCAGCATGCCCTTATGCCCGT...GATGCAGAGATGGCAATGGCAGAGTGCCAGAACGACAGTGGCGAGATGCAAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR GCA 90 bp TGTTGGCGTCCTCGTGGTCTGGGTCTGGATCTTGCATCTCGCCACTGTCGTTCTAGCGCTCCCCGATTTTaGATTCCAGCTCTCGCAAAT +
Preference number: 4 (lower is better)
Translates to: CWRPRGLGLDLASRHCRSSAPRF*IPALAN
Trigger: ATTTGCGAGAGCTGGAATGCAAAATCGGGGAGCGCT...AGAACGACAGTGGCGAGATGCAAGATCCAGACCCAGACCACGAGGACGCCAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR GCA 90 bp GTGCAAGTTGGTTCCTGTACCCACGGAGGAGCCCTTGGGAATGACGGGCATAAGAGCGCTCCCCGATTTTaGATTCCAGCTCTCGCAAAT +
Preference number: 4 (lower is better)
Translates to: VQVGSCTHGGALGNDGHKSAPRF*IPALAN
Trigger: ATTTGCGAGAGCTGGAATGCAAAATCGGGGAGCGCT...CTTATGCCCGTCATTCCCAAGGGCTCCTCCGTGGGTACAGGAACCAACTTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CCA 90 bp AGTCTCAGGAGTGTCACTGTGGCTAGCACTTGGATTGATCAGGTGTGTGGGGTAAGCTTCTTGCAGTACTaGCACACTGTGGGCCGGGTG +
Preference number: 4 (lower is better)
Translates to: SLRSVTVASTWIDQVCGVSFLQY*HTVGRV
Trigger: CACCCGGCCCACAGTGTGCCAGTACTGCAAGAAGCT...TACCCCACACACCTGATCAATCCAAGTGCTAGCCACAGTGACACTCCTGAGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CCA 90 bp GCTATCCAATCTCCAATAGTGCCGTTTCCGCAGCGTGTCCTTGCTGGTGTAGTGTCGCCACTGTCGTTCTaGCACTCTGCCATTGCCATC +
Preference number: 4 (lower is better)
Translates to: AIQSPIVPFPQRVLAGVVSPLSF*HSAIAI
Trigger: GATGGCAATGGCAGAGTGCCAGAACGACAGTGGCGA...CACTACACCAGCAAGGACACGCTGCGGAAACGGCACTATTGGAGATTGGATAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp GCTATCCAATCTCCAATAGTGCCGTTTCCGCAGCGTGTCCTTGCTGGTGTAGTGTCACATTTAAGACCTTaGCGTACCAGCCCCCACAGC +
Preference number: 4 (lower is better)
Translates to: AIQSPIVPFPQRVLAGVVSHLRP*RTSPHS
Trigger: GCTGTGGGGGCTGGTACGTCAAGGTCTTAAATGTGA...CACTACACCAGCAAGGACACGCTGCGGAAACGGCACTATTGGAGATTGGATAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp AGTCCTGTAGCCAAGGGTGGCTCAAGGTCTTATCCACACTGTAGCGCTTTCTCACACTCCCTTCTTCCATaGCCACATCAGACTCTGCCC +
Preference number: 4 (lower is better)
Translates to: SPVAKGGSRSYPHCSAFSHSLLP*PHQTLP
Trigger: GGGCAGAGTCTGATGTGGTCATGGAAGAAGGGAGTG...TGAGAAAGCGCTACAGTGTGGATAAGACCTTGAGCCACCCTTGGCTACAGGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp GTCTGGGTCTGGATCTTGCATCTCGCCACTGTCGTTCTGGCACTCTGCCATTGCACTGCACTACCCTCATaGGTGGGATATTGTTGCTTG +
Preference number: 4 (lower is better)
Translates to: VWVWILHLATVVLALCHCTALPS*VGYCCL
Trigger: CAAGCAACAATATCCCACTCATGAGGGTAGTGCAGT...GCAATGGCAGAGTGCCAGAACGACAGTGGCGAGATGCAAGATCCAGACCCAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR GCA 90 bp AGGCTTAAGAGCACTAGGTCTTGCACAGCTAGGTGCATTGTCTTGAGTTTAAATGCAGATGGAACGAGATaGCCCCGACCGGGGCCGCGA +
Preference number: 4 (lower is better)
Translates to: RLKSTRSCTARCIVLSLNADGTR*PRPGPR
Trigger: TCGCGGCCCCGGTCGGGGGCATCTCGTTCCATCTGC...ATTTAAACTCAAGACAATGCACCTAGCTGTGCAAGACCTAGTGCTCTTAAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331968.11
ENST00000616995.4
CDS-3UTR CCA 90 bp AGTCCTGTAGCCAAGGGTGGCTCAAGGTCTTATCCACACTGTAGCGCTTTCTCAGCAGCGTGTCCTTGCTaGTGTAGTGGACCATCCATC +
Preference number: 4 (lower is better)
Translates to: SPVAKGGSRSYPHCSAFSAACPC*CSGPSI
Trigger: GATGGATGGTCCACTACACCAGCAAGGACACGCTGC...TGAGAAAGCGCTACAGTGTGGATAAGACCTTGAGCCACCCTTGGCTACAGGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp ACCGAGGGCTTTCATTTCTGTTTCTTCAGTCTCAGGAGTGTCACTGTGGCTAGCGCGTGGGGACGAATCTaGAAGTCTTCAAAGGTGGCG +
Preference number: 4 (lower is better)
Translates to: TEGFHFCFFSLRSVTVASAWGRI*KSSKVA
Trigger: CGCCACCTTTGAAGACTTTCAGATTCGTCCCCACGC...GCTAGCCACAGTGACACTCCTGAGACTGAAGAAACAGAAATGAAAGCCCTCGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp GCTATCCAATCTCCAATAGTGCCGTTTCCGCAGCGTGTCCTTGCTGGTGTAGTGTCCTCTTCGTGTGTTTaGCAGACTGCACTACCCTCA +
Preference number: 4 (lower is better)
Translates to: AIQSPIVPFPQRVLAGVVSSSCV*QTALPS
Trigger: TGAGGGTAGTGCAGTCTGTCAAACACACGAAGAGGA...CACTACACCAGCAAGGACACGCTGCGGAAACGGCACTATTGGAGATTGGATAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR GCA 90 bp CTGACAGAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTCCGCCGCCAAGAATCTaGCGCCTGGCGCGCTCGGAA +
Preference number: 4 (lower is better)
Translates to: LTENNGSSARQMLNLTVCPPPRI*RLARSE
Trigger: TTCCGAGCGCGCCAGGCGGCAGATTCTTGGCGGCGG...ACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTCTGTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331968.11
CDS-3UTR GCA 90 bp AGGCTTAAGAGCACTAGGTCTTGCACAGCTAGGTGCATTGTCTTGAGTTTAAATTCCCCGGACGAGTCCTaGAGCAGCAGCACCGGCTCA +
Preference number: 4 (lower is better)
Translates to: RLKSTRSCTARCIVLSLNSPDES*SSSTGS
Trigger: TGAGCCGGTGCTGCTGCTGCAGGACTCGTCCGGGGA...ATTTAAACTCAAGACAATGCACCTAGCTGTGCAAGACCTAGTGCTCTTAAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331968.11
ENST00000616995.4
CDS-3UTR GCA 90 bp CACAGAGATATCTCTGTGCAAGTTGGTTCCTGTACCCACGGAGGAGCCCTTGGGTCTGATGGTGATTTTTaGAGAAGGGGCTCATCAGGG +
Preference number: 4 (lower is better)
Translates to: HRDISVQVGSCTHGGALGSDGDF*RRGSSG
Trigger: CCCTGATGAGCCCCTTCTGCAAAAATCACCATCAGA...CCCAAGGGCTCCTCCGTGGGTACAGGAACCAACTTGCACAGAGATATCTCTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651571.1
CDS-3UTR GCA 90 bp AGAGATATCTCTGTGCAAGTTGGTTCCTGTACCCACGGAGGAGCCCTTGGGAATGTCGTTCTGGCACTCTaGCATTGCCATCTCTGCATC +
Preference number: 4 (lower is better)
Translates to: RDISVQVGSCTHGGALGNVVLAL*HCHLCI
Trigger: GATGCAGAGATGGCAATGGCAGAGTGCCAGAACGAC...ATTCCCAAGGGCTCCTCCGTGGGTACAGGAACCAACTTGCACAGAGATATCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CCA 90 bp AGTCCTGTAGCCAAGGGTGGCTCAAGGTCTTATCCACACTGTAGCGCTTTCTCAGGCATAAGGGCATGCTaGATGGCTATCTCCCACATC +
Preference number: 4 (lower is better)
Translates to: SPVAKGGSRSYPHCSAFSGIRAC*MAISHI
Trigger: GATGTGGGAGATAGCCATCCAGCATGCCCTTATGCC...TGAGAAAGCGCTACAGTGTGGATAAGACCTTGAGCCACCCTTGGCTACAGGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp GTCTGGATCTTGCATCTCGCCACTGTCGTTCTGGCACTCTGCCATTGCCATCTCAACACTGTTATTTGGTaGTGGGCTGGAAGGATTGAC +
Preference number: 4 (lower is better)
Translates to: VWILHLATVVLALCHCHLNTVIW*WAGRID
Trigger: GTCAATCCTTCCAGCCCATCACCAAATAACAGTGTT...GAGATGGCAATGGCAGAGTGCCAGAACGACAGTGGCGAGATGCAAGATCCAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp GTCTGGGTCTGGATCTTGCATCTCGCCACTGTCGTTCTGGCACTCTGCCATTGCAAGACTTCTCTCCAATaGTCCGGGCAAAACCAAAAT +
Preference number: 4 (lower is better)
Translates to: VWVWILHLATVVLALCHCKTSLQ*SGQNQN
Trigger: ATTTTGGTTTTGCCCGGATCATTGGAGAGAAGTCTT...GCAATGGCAGAGTGCCAGAACGACAGTGGCGAGATGCAAGATCCAGACCCAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp GCATTTAGGCTTAAGAGCACTAGGTCTTGCACAGCTAGGTGCATTGTCTTGAGTGAACTCAGAGGATGCTaGCACGCTCACCGAGGGCTT +
Preference number: 4 (lower is better)
Translates to: AFRLKSTRSCTARCIVLSELRGC*HAHRGL
Trigger: AAGCCCTCGGTGAGCGTGTCAGCATCCTCTGAGTTC...ACTCAAGACAATGCACCTAGCTGTGCAAGACCTAGTGCTCTTAAGCCTAAATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR GCA 90 bp ACCGAGGGCTTTCATTTCTGTTTCTTCAGTCTCAGGAGTGTCACTGTGGCTAGCTTGCACTGCAAGCCCTaGCTGAAAAGCCCCTTCAGA +
Preference number: 4 (lower is better)
Translates to: TEGFHFCFFSLRSVTVASLHCKP*LKSPFR
Trigger: TCTGAAGGGGCTTTTCAGGCAGGGCTTGCAGTGCAA...GCTAGCCACAGTGACACTCCTGAGACTGAAGAAACAGAAATGAAAGCCCTCGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR GCA 90 bp ATCTTGCATCTCGCCACTGTCGTTCTGGCACTCTGCCATTGCCATCTCTGCATCTGCCATTGCCATCTCTaGATCTTGGACCATTGCTTC +
Preference number: 4 (lower is better)
Translates to: ILHLATVVLALCHCHLCICHCHL*ILDHCF
Trigger: GAAGCAATGGTCCAAGATGCAGAGATGGCAATGGCA...GATGCAGAGATGGCAATGGCAGAGTGCCAGAACGACAGTGGCGAGATGCAAGAT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR GCA 90 bp AGTCTCAGGAGTGTCACTGTGGCTAGCACTTGGATTGATCAGGTGTGTGGGGTAGTGTGTTTGACAGACTaGACTACCCTCATGAGTGGG +
Preference number: 4 (lower is better)
Translates to: SLRSVTVASTWIDQVCGVVCLTD*TTLMSG
Trigger: CCCACTCATGAGGGTAGTGCAGTCTGTCAAACACAC...TACCCCACACACCTGATCAATCCAAGTGCTAGCCACAGTGACACTCCTGAGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR GCA 90 bp CATTGCCATCTCTGCATCTTGGACCATTGCTTCTTCCATATCATCCATGAGCCCACGGGCATAAGGGCATaGTGGATGGCTATCTCCCAC +
Preference number: 4 (lower is better)
Translates to: HCHLCILDHCFFHIIHEPTGIRA*WMAISH
Trigger: GTGGGAGATAGCCATCCAGCATGCCCTTATGCCCGT...GGGCTCATGGATGATATGGAAGAAGCAATGGTCCAAGATGCAGAGATGGCAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR GCA 90 bp AGGCTTAAGAGCACTAGGTCTTGCACAGCTAGGTGCATTGTCTTGAGTTTAAATAGGTGTGTGGGGTACTaGAGCCCCTGCTCGCCTGCA +
Preference number: 4 (lower is better)
Translates to: RLKSTRSCTARCIVLSLNRCVGY*SPCSPA
Trigger: TGCAGGCGAGCAGGGGCTGCAGTACCCCACACACCT...ATTTAAACTCAAGACAATGCACCTAGCTGTGCAAGACCTAGTGCTCTTAAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR CCA 90 bp GCTATCCAATCTCCAATAGTGCCGTTTCCGCAGCGTGTCCTTGCTGGTGTAGTGATAAGATCGCCTTCCTaGATATCACTGGCCGCTTTC +
Preference number: 4 (lower is better)
Translates to: AIQSPIVPFPQRVLAGVVIRSPS*ISLAAF
Trigger: GAAAGCGGCCAGTGATATCCAGGAAGGCGATCTTAT...CACTACACCAGCAAGGACACGCTGCGGAAACGGCACTATTGGAGATTGGATAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CCA 90 bp AGTCCTGTAGCCAAGGGTGGCTCAAGGTCTTATCCACACTGTAGCGCTTTCTCATATCTCTGTGCAAGTTaGTTCCTGTACCCACGGAGG +
Preference number: 4 (lower is better)
Translates to: SPVAKGGSRSYPHCSAFSYLCAS*FLYPRR
Trigger: CCTCCGTGGGTACAGGAACCAACTTGCACAGAGATA...TGAGAAAGCGCTACAGTGTGGATAAGACCTTGAGCCACCCTTGGCTACAGGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CCA 90 bp CACAGAGATATCTCTGTGCAAGTTGGTTCCTGTACCCACGGAGGAGCCCTTGGGTTCCTTCCAGGGATTTaGTGGATACATGAAAGCTGC +
Preference number: 4 (lower is better)
Translates to: HRDISVQVGSCTHGGALGFLPGI*WIHESC
Trigger: GCAGCTTTCATGTATCCACCAAATCCCTGGAAGGAA...CCCAAGGGCTCCTCCGTGGGTACAGGAACCAACTTGCACAGAGATATCTCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp AGTCTCAGGAGTGTCACTGTGGCTAGCACTTGGATTGATCAGGTGTGTGGGGTAAAAGGTGGCGGAAGCTaGCAAGACCACTTCAATAAG +
Preference number: 4 (lower is better)
Translates to: SLRSVTVASTWIDQVCGVKGGGS*QDHFNK
Trigger: CTTATTGAAGTGGTCTTGTCAGCTTCCGCCACCTTT...TACCCCACACACCTGATCAATCCAAGTGCTAGCCACAGTGACACTCCTGAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651616.1
CDS-3UTR TCA 90 bp GCATTTAGGCTTAAGAGCACTAGGTCTTGCACAGCTAGGTGCATTGTCTTGAGTGCGTGGGGACGAATCTaGAAGTCTTCAAAGGTGGCG +
Preference number: 4 (lower is better)
Translates to: AFRLKSTRSCTARCIVLSAWGRI*KSSKVA
Trigger: CGCCACCTTTGAAGACTTTCAGATTCGTCCCCACGC...ACTCAAGACAATGCACCTAGCTGTGCAAGACCTAGTGCTCTTAAGCCTAAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR TCA 90 bp GCATTTAGGCTTAAGAGCACTAGGTCTTGCACAGCTAGGTGCATTGTCTTGAGTAGTGAGGGAAACGTTTaGGAGCCTTCTCCGCCTCAC +
Preference number: 4 (lower is better)
Translates to: AFRLKSTRSCTARCIVLSSEGNV*EPSPPH
Trigger: GTGAGGCGGAGAAGGCTCTCAAACGTTTCCCTCACT...ACTCAAGACAATGCACCTAGCTGTGCAAGACCTAGTGCTCTTAAGCCTAAATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR TCA 90 bp TGTTGGCGTCCTCGTGGTCTGGGTCTGGATCTTGCATCTCGCCACTGTCGTTCTCGTCCAATGTATGATTaGGAATTTGACCTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: CWRPRGLGLDLASRHCRSRPMYD*EFDLFS
Trigger: AGAGAAGAGGTCAAATTCTCAATCATACATTGGACG...AGAACGACAGTGGCGAGATGCAAGATCCAGACCCAGACCACGAGGACGCCAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp AGAGATATCTCTGTGCAAGTTGGTTCCTGTACCCACGGAGGAGCCCTTGGGAATCTTCCATATCATCCATaGGCCCACTGTTCCTTTCAC +
Preference number: 4 (lower is better)
Translates to: RDISVQVGSCTHGGALGNLPYHP*AHCSFH
Trigger: GTGAAAGGAACAGTGGGCTCATGGATGATATGGAAG...ATTCCCAAGGGCTCCTCCGTGGGTACAGGAACCAACTTGCACAGAGATATCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp GTCTGGGTCTGGATCTTGCATCTCGCCACTGTCGTTCTGGCACTCTGCCATTGCCTTCCTGTGTCATTCTaGAAGAGGGTAATACATTTG +
Preference number: 4 (lower is better)
Translates to: VWVWILHLATVVLALCHCLPVSF*KRVIHL
Trigger: CAAATGTATTACCCTCTTTCAGAATGACACAGGAAG...GCAATGGCAGAGTGCCAGAACGACAGTGGCGAGATGCAAGATCCAGACCCAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp ATCTTGCATCTCGCCACTGTCGTTCTGGCACTCTGCCATTGCCATCTCTGCATCAACACTGTTATTTGGTaGTGGGCTGGAAGGATTGAC +
Preference number: 4 (lower is better)
Translates to: ILHLATVVLALCHCHLCINTVIW*WAGRID
Trigger: GTCAATCCTTCCAGCCCATCACCAAATAACAGTGTT...GATGCAGAGATGGCAATGGCAGAGTGCCAGAACGACAGTGGCGAGATGCAAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR GCA 90 bp CATTGCCATCTCTGCATCTTGGACCATTGCTTCTTCCATATCATCCATGAGCCCGACCACATCAGACTCTaGCCCAGGGCTAAGCAAATC +
Preference number: 4 (lower is better)
Translates to: HCHLCILDHCFFHIIHEPDHIRL*PRAKQI
Trigger: GATTTGCTTAGCCCTGGGGCAGAGTCTGATGTGGTC...GGGCTCATGGATGATATGGAAGAAGCAATGGTCCAAGATGCAGAGATGGCAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR GCA 90 bp TTAATGGTCACTTCGCCAAGGCAGTTGTTTGGTACTTTCGGTGCACAACGTTTATCCGCAGCGTGTCCTTaGTGGTGTAGTGGACCATCC +
Preference number: 4 (lower is better)
Translates to: LMVTSPRQLFGTFGAQRLSAACP*WCSGPS
Trigger: GGATGGTCCACTACACCAGCAAGGACACGCTGCGGA...TAAACGTTGTGCACCGAAAGTACCAAACAACTGCCTTGGCGAAGTGACCATTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR GCA 90 bp GTGCAAGTTGGTTCCTGTACCCACGGAGGAGCCCTTGGGAATGACGGGCATAAGTTTCCTTGTAGTACCTaGTTCCTGTGTCATTCTGAA +
Preference number: 4 (lower is better)
Translates to: VQVGSCTHGGALGNDGHKFPCST*FLCHSE
Trigger: TTCAGAATGACACAGGAAGCAGGTACTACAAGGAAA...CTTATGCCCGTCATTCCCAAGGGCTCCTCCGTGGGTACAGGAACCAACTTGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR GCA 90 bp AGTCCTGTAGCCAAGGGTGGCTCAAGGTCTTATCCACACTGTAGCGCTTTCTCAAAGAGCACTAGGTCTTaGACAGCTAGGTGCATTGTC +
Preference number: 4 (lower is better)
Translates to: SPVAKGGSRSYPHCSAFSKSTRS*TARCIV
Trigger: GACAATGCACCTAGCTGTGCAAGACCTAGTGCTCTT...TGAGAAAGCGCTACAGTGTGGATAAGACCTTGAGCCACCCTTGGCTACAGGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651571.1
CDS-3UTR CCA 90 bp TGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTATTTATTAGTTCCACAAGAATCTGCCGCCTaGCGCGCTCGGAAGGACGGG +
Preference number: 4 (lower is better)
Translates to: WQFCKANVKPDRMYLLVPQESAA*RARKDG
Trigger: CCCGTCCTTCCGAGCGCGCCAGGCGGCAGATTCTTG...TGGAACTAATAAATACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331968.11
CDS-3UTR CCA 90 bp AGTCTCAGGAGTGTCACTGTGGCTAGCACTTGGATTGATCAGGTGTGTGGGGTAGAAAGTCTTCAAAGGTaGCGGAAGCTGACAAGACCA +
Preference number: 4 (lower is better)
Translates to: SLRSVTVASTWIDQVCGVESLQR*RKLTRP
Trigger: TGGTCTTGTCAGCTTCCGCCACCTTTGAAGACTTTC...TACCCCACACACCTGATCAATCCAAGTGCTAGCCACAGTGACACTCCTGAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651616.1
CDS-3UTR CCA 90 bp GCATTTAGGCTTAAGAGCACTAGGTCTTGCACAGCTAGGTGCATTGTCTTGAGTCTCGTGGTCTGGGTCTaGATCTTGCATCTCGCCACT +
Preference number: 4 (lower is better)
Translates to: AFRLKSTRSCTARCIVLSLVVWV*ILHLAT
Trigger: AGTGGCGAGATGCAAGATCCAGACCCAGACCACGAG...ACTCAAGACAATGCACCTAGCTGTGCAAGACCTAGTGCTCTTAAGCCTAAATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR CCA 90 bp GGCATAAGGGCATGCTGGATGGCTATCTCCCACATCCTGGCCACATCTGCACCATCCAGCATGTCTCCATaGAGTTTTTCCATAACAACA +
Preference number: 4 (lower is better)
Translates to: GIRACWMAISHILATSAPSSMSP*SFSITT
Trigger: TGTTGTTATGGAAAAACTCCATGGAGACATGCTGGA...TGGTGCAGATGTGGCCAGGATGTGGGAGATAGCCATCCAGCATGCCCTTATGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CCA 90 bp AGAGATATCTCTGTGCAAGTTGGTTCCTGTACCCACGGAGGAGCCCTTGGGAATTCAGGAGTGTCACTGTaGCTAGCACTTGGATTGATC +
Preference number: 4 (lower is better)
Translates to: RDISVQVGSCTHGGALGNSGVSL*LALGLI
Trigger: GATCAATCCAAGTGCTAGCCACAGTGACACTCCTGA...ATTCCCAAGGGCTCCTCCGTGGGTACAGGAACCAACTTGCACAGAGATATCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp GCATTTAGGCTTAAGAGCACTAGGTCTTGCACAGCTAGGTGCATTGTCTTGAGTTCACATTTAAGACCTTaGCGTACCAGCCCCCACAGC +
Preference number: 4 (lower is better)
Translates to: AFRLKSTRSCTARCIVLSSHLRP*RTSPHS
Trigger: GCTGTGGGGGCTGGTACGTCAAGGTCTTAAATGTGA...ACTCAAGACAATGCACCTAGCTGTGCAAGACCTAGTGCTCTTAAGCCTAAATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR TCA 90 bp AGTCCTGTAGCCAAGGGTGGCTCAAGGTCTTATCCACACTGTAGCGCTTTCTCAGTGATTTCGAAACAATaGGGATTGGCCCCATTAGGA +
Preference number: 4 (lower is better)
Translates to: SPVAKGGSRSYPHCSAFSVISKQ*GLAPLG
Trigger: TCCTAATGGGGCCAATCCTCATTGTTTCGAAATCAC...TGAGAAAGCGCTACAGTGTGGATAAGACCTTGAGCCACCCTTGGCTACAGGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp CACAGAGATATCTCTGTGCAAGTTGGTTCCTGTACCCACGGAGGAGCCCTTGGGTCATCAGGAAAAATCTaGTATACTGTGCTGATGTCC +
Preference number: 4 (lower is better)
Translates to: HRDISVQVGSCTHGGALGSSGKI*YTVLMS
Trigger: GGACATCAGCACAGTATATCAGATTTTTCCTGATGA...CCCAAGGGCTCCTCCGTGGGTACAGGAACCAACTTGCACAGAGATATCTCTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp ATCTTGCATCTCGCCACTGTCGTTCTGGCACTCTGCCATTGCCATCTCTGCATCACGATATTTTTAAAATaGAGGTGCCGCAAAGCCACG +
Preference number: 4 (lower is better)
Translates to: ILHLATVVLALCHCHLCITIFLK*RCRKAT
Trigger: CGTGGCTTTGCGGCACCTTCATTTTAAAAATATCGT...GATGCAGAGATGGCAATGGCAGAGTGCCAGAACGACAGTGGCGAGATGCAAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp CATCTGACAGAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTAGGGGGTACCCACCACTaGCCTCCGGAAAGACTTCTC +
Preference number: 4 (lower is better)
Translates to: HLTENNGSSARQMLNLTVGGTHH*PPERLL
Trigger: GAGAAGTCTTTCCGGAGGTCAGTGGTGGGTACCCCC...TACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTCTGTCAGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp CTGACAGAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTGGGGGTACCCACCACTaGCCTCCGGAAAGACTTCTC +
Preference number: 4 (lower is better)
Translates to: LTENNGSSARQMLNLTVCGGTHH*PPERLL
Trigger: GAGAAGTCTTTCCGGAGGTCAGTGGTGGGTACCCCC...ACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTCTGTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp GTCTGGGTCTGGATCTTGCATCTCGCCACTGTCGTTCTGGCACTCTGCCATTGCGATTTGGTGGATACATaGAAGCTGCATTCTGAATTT +
Preference number: 4 (lower is better)
Translates to: VWVWILHLATVVLALCHCDLVDT*KLHSEF
Trigger: AAATTCAGAATGCAGCTTTCATGTATCCACCAAATC...GCAATGGCAGAGTGCCAGAACGACAGTGGCGAGATGCAAGATCCAGACCCAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp GACAACACCAATGGGACACACCAAACAGAACTACTTCACAGATACATTCTGTCTGAACTCAGAGGATGCTaGCACGCTCACCGAGGGCTT +
Preference number: 4 (lower is better)
Translates to: DNTNGTHQTELLHRYILSELRGC*HAHRGL
Trigger: AAGCCCTCGGTGAGCGTGTCAGCATCCTCTGAGTTC...AGACAGAATGTATCTGTGAAGTAGTTCTGTTTGGTGTGTCCCATTGGTGTTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR GCA 90 bp GTTTCGTGTTTCAGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATAGCAGATGGAACGAGATaGCCCCGACCGGGGCCGCGA +
Preference number: 4 (lower is better)
Translates to: VSCFRELLLIQHSWSHKIADGTR*PRPGPR
Trigger: TCGCGGCCCCGGTCGGGGGCATCTCGTTCCATCTGC...TATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCTGAAACACGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
CDS-3UTR GCA 90 bp AGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATACAAATGCTTCTGGCAGATGGAACGAGATaGCCCCGACCGGGGCCGCGA +
Preference number: 4 (lower is better)
Translates to: RELLLIQHSWSHKIQMLLADGTR*PRPGPR
Trigger: TCGCGGCCCCGGTCGGGGGCATCTCGTTCCATCTGC...CAGAAGCATTTGTATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
CDS-3UTR GCA 90 bp ACACACCAAACAGAACTACTTCACAGATACATTCTGTCTCTTACCAAAATGAAGTCCCCGGACGAGTCCTaGAGCAGCAGCACCGGCTCA +
Preference number: 4 (lower is better)
Translates to: THQTELLHRYILSLTKMKSPDES*SSSTGS
Trigger: TGAGCCGGTGCTGCTGCTGCAGGACTCGTCCGGGGA...CTTCATTTTGGTAAGAGACAGAATGTATCTGTGAAGTAGTTCTGTTTGGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331968.11
ENST00000616995.4
CDS-3UTR GCA 90 bp ATCTCTGCATCTTGGACCATTGCTTCTTCCATATCATCCATGAGCCCACTGTTCTTGCACTGCAAGCCCTaGCTGAAAAGCCCCTTCAGA +
Preference number: 4 (lower is better)
Translates to: ISASWTIASSISSMSPLFLHCKP*LKSPFR
Trigger: TCTGAAGGGGCTTTTCAGGCAGGGCTTGCAGTGCAA...GAACAGTGGGCTCATGGATGATATGGAAGAAGCAATGGTCCAAGATGCAGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR GCA 90 bp CATTGCCATCTCTGCATCTTGGACCATTGCTTCTTCCATATCATCCATGAGCCCCTGCAATCTTTGCACTaGAAGCCCTGCCTGAAAAGC +
Preference number: 4 (lower is better)
Translates to: HCHLCILDHCFFHIIHEPLQSLH*KPCLKS
Trigger: GCTTTTCAGGCAGGGCTTGCAGTGCAAAGATTGCAG...GGGCTCATGGATGATATGGAAGAAGCAATGGTCCAAGATGCAGAGATGGCAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR GCA 90 bp GCATTTAGGCTTAAGAGCACTAGGTCTTGCACAGCTAGGTGCATTGTCTTGAGTCTGGCACTCTGCCATTaGCATCTCTGCATCTTGGAC +
Preference number: 4 (lower is better)
Translates to: AFRLKSTRSCTARCIVLSLALCH*HLCILD
Trigger: GTCCAAGATGCAGAGATGGCAATGGCAGAGTGCCAG...ACTCAAGACAATGCACCTAGCTGTGCAAGACCTAGTGCTCTTAAGCCTAAATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR GCA 90 bp GCTATCCAATCTCCAATAGTGCCGTTTCCGCAGCGTGTCCTTGCTGGTGTAGTGAAAAACTTCGTTATGTaGTCTGGCAACCTGCCCTTT +
Preference number: 4 (lower is better)
Translates to: AIQSPIVPFPQRVLAGVVKNFVM*SGNLPF
Trigger: AAAGGGCAGGTTGCCAGAGCACATAACGAAGTTTTT...CACTACACCAGCAAGGACACGCTGCGGAAACGGCACTATTGGAGATTGGATAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR GCA 90 bp TGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTATTTATTAGTTCCAAGGTGTGTGGGGTACTaGAGCCCCTGCTCGCCTGCA +
Preference number: 4 (lower is better)
Translates to: WQFCKANVKPDRMYLLVPRCVGY*SPCSPA
Trigger: TGCAGGCGAGCAGGGGCTGCAGTACCCCACACACCT...TGGAACTAATAAATACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CCA 90 bp GAGTTTGTTTACAATGACAACACCAATGGGACACACCAAACAGAACTACTTCACAGGCCGATCTGCAGATaGAACGAGATGCCCCCGACC +
Preference number: 4 (lower is better)
Translates to: EFVYNDNTNGTHQTELLHRPICR*NEMPPT
Trigger: GGTCGGGGGCATCTCGTTCCATCTGCAGATCGGCCT...GTGAAGTAGTTCTGTTTGGTGTGTCCCATTGGTGTTGTCATTGTAAACAAACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331968.11
ENST00000616995.4
CDS-3UTR CCA 90 bp GACAACACCAATGGGACACACCAAACAGAACTACTTCACAGATACATTCTGTCTAGTACTGGCACACTGTaGGCCGGGTGTAGGAGTGGA +
Preference number: 4 (lower is better)
Translates to: DNTNGTHQTELLHRYILSSTGTL*AGCRSG
Trigger: TCCACTCCTACACCCGGCCCACAGTGTGCCAGTACT...AGACAGAATGTATCTGTGAAGTAGTTCTGTTTGGTGTGTCCCATTGGTGTTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR CCA 90 bp AGAGATATCTCTGTGCAAGTTGGTTCCTGTACCCACGGAGGAGCCCTTGGGAATGCCATCTCTGCATCTTaGACCATTGCTTCTTCCATA +
Preference number: 4 (lower is better)
Translates to: RDISVQVGSCTHGGALGNAISAS*TIASSI
Trigger: TATGGAAGAAGCAATGGTCCAAGATGCAGAGATGGC...ATTCCCAAGGGCTCCTCCGTGGGTACAGGAACCAACTTGCACAGAGATATCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CCA 90 bp GACAACACCAATGGGACACACCAAACAGAACTACTTCACAGATACATTCTGTCTGGCGTCCTCGTGGTCTaGGTCTGGATCTTGCATCTC +
Preference number: 4 (lower is better)
Translates to: DNTNGTHQTELLHRYILSGVLVV*VWILHL
Trigger: GAGATGCAAGATCCAGACCCAGACCACGAGGACGCC...AGACAGAATGTATCTGTGAAGTAGTTCTGTTTGGTGTGTCCCATTGGTGTTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR CCA 90 bp AGGCTTAAGAGCACTAGGTCTTGCACAGCTAGGTGCATTGTCTTGAGTTTAAATGGCGTCCTCGTGGTCTaGGTCTGGATCTTGCATCTC +
Preference number: 4 (lower is better)
Translates to: RLKSTRSCTARCIVLSLNGVLVV*VWILHL
Trigger: GAGATGCAAGATCCAGACCCAGACCACGAGGACGCC...ATTTAAACTCAAGACAATGCACCTAGCTGTGCAAGACCTAGTGCTCTTAAGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR CCA 90 bp GCATTTAGGCTTAAGAGCACTAGGTCTTGCACAGCTAGGTGCATTGTCTTGAGTGGCATAAGGGCATGCTaGATGGCTATCTCCCACATC +
Preference number: 4 (lower is better)
Translates to: AFRLKSTRSCTARCIVLSGIRAC*MAISHI
Trigger: GATGTGGGAGATAGCCATCCAGCATGCCCTTATGCC...ACTCAAGACAATGCACCTAGCTGTGCAAGACCTAGTGCTCTTAAGCCTAAATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR CCA 90 bp ACCGAGGGCTTTCATTTCTGTTTCTTCAGTCTCAGGAGTGTCACTGTGGCTAGCTCAGGAGTGTCACTGTaGCTAGCACTTGGATTGATC +
Preference number: 4 (lower is better)
Translates to: TEGFHFCFFSLRSVTVASSGVSL*LALGLI
Trigger: GATCAATCCAAGTGCTAGCCACAGTGACACTCCTGA...GCTAGCCACAGTGACACTCCTGAGACTGAAGAAACAGAAATGAAAGCCCTCGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp GCTATCCAATCTCCAATAGTGCCGTTTCCGCAGCGTGTCCTTGCTGGTGTAGTGAACGTTTATGGCAGTTaGATCTGCAATCTTTGCACT +
Preference number: 4 (lower is better)
Translates to: AIQSPIVPFPQRVLAGVVNVYGS*ICNLCT
Trigger: AGTGCAAAGATTGCAGATTCAACTGCCATAAACGTT...CACTACACCAGCAAGGACACGCTGCGGAAACGGCACTATTGGAGATTGGATAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp GCATTTAGGCTTAAGAGCACTAGGTCTTGCACAGCTAGGTGCATTGTCTTGAGTCACCAACGCCACTGGTaGGAACACTGTTATTTGGTG +
Preference number: 4 (lower is better)
Translates to: AFRLKSTRSCTARCIVLSHQRHW*EHCYLV
Trigger: CACCAAATAACAGTGTTCTCACCAGTGGCGTTGGTG...ACTCAAGACAATGCACCTAGCTGTGCAAGACCTAGTGCTCTTAAGCCTAAATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR TCA 90 bp CACAGAGATATCTCTGTGCAAGTTGGTTCCTGTACCCACGGAGGAGCCCTTGGGTCTGATATACTGTGCTaGTGTCCACATTTTCTTGAA +
Preference number: 4 (lower is better)
Translates to: HRDISVQVGSCTHGGALGSDILC*CPHFLE
Trigger: TTCAAGAAAATGTGGACATCAGCACAGTATATCAGA...CCCAAGGGCTCCTCCGTGGGTACAGGAACCAACTTGCACAGAGATATCTCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp CACAGAGATATCTCTGTGCAAGTTGGTTCCTGTACCCACGGAGGAGCCCTTGGGAGCTTTGTTCTCATCTaGCAGAAAATAATGGCAGTT +
Preference number: 4 (lower is better)
Translates to: HRDISVQVGSCTHGGALGSFVLI*QKIMAV
Trigger: AACTGCCATTATTTTCTGTCAGATGAGAACAAAGCT...CCCAAGGGCTCCTCCGTGGGTACAGGAACCAACTTGCACAGAGATATCTCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR GCA 90 bp TCGTGTTTCAGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATACAATCCCCGGACGAGTCCTaGAGCAGCAGCACCGGCTCA +
Preference number: 4 (lower is better)
Translates to: SCFRELLLIQHSWSHKIQSPDES*SSSTGS
Trigger: TGAGCCGGTGCTGCTGCTGCAGGACTCGTCCGGGGA...TTGTATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCTGAAACACGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
CDS-3UTR GCA 90 bp CTGACAGAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTTCCGCAGCGTGTCCTTaGTGGTGTAGTGGACCATCC +
Preference number: 4 (lower is better)
Translates to: LTENNGSSARQMLNLTVCSAACP*WCSGPS
Trigger: GGATGGTCCACTACACCAGCAAGGACACGCTGCGGA...ACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTCTGTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR GCA 90 bp GACAACACCAATGGGACACACCAAACAGAACTACTTCACAGATACATTCTGTCTACGGGCATAAGGGCATaGTGGATGGCTATCTCCCAC +
Preference number: 4 (lower is better)
Translates to: DNTNGTHQTELLHRYILSTGIRA*WMAISH
Trigger: GTGGGAGATAGCCATCCAGCATGCCCTTATGCCCGT...AGACAGAATGTATCTGTGAAGTAGTTCTGTTTGGTGTGTCCCATTGGTGTTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR CCA 90 bp GCATTTAGGCTTAAGAGCACTAGGTCTTGCACAGCTAGGTGCATTGTCTTGAGTCTTCCTGGATATCACTaGCCGCTTTCACCAGCTGAA +
Preference number: 4 (lower is better)
Translates to: AFRLKSTRSCTARCIVLSLPGYH*PLSPAE
Trigger: TTCAGCTGGTGAAAGCGGCCAGTGATATCCAGGAAG...ACTCAAGACAATGCACCTAGCTGTGCAAGACCTAGTGCTCTTAAGCCTAAATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR CCA 90 bp CATCTGACAGAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTAAGTACTGGCACACTGTaGGCCGGGTGTAGGAGTGGA +
Preference number: 4 (lower is better)
Translates to: HLTENNGSSARQMLNLTVSTGTL*AGCRSG
Trigger: TCCACTCCTACACCCGGCCCACAGTGTGCCAGTACT...TACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTCTGTCAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CCA 90 bp CTGACAGAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTAGCTTCTTGCAGTACTaGCACACTGTGGGCCGGGTG +
Preference number: 4 (lower is better)
Translates to: LTENNGSSARQMLNLTVCSFLQY*HTVGRV
Trigger: CACCCGGCCCACAGTGTGCCAGTACTGCAAGAAGCT...ACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTCTGTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CCA 90 bp AGGCTTAAGAGCACTAGGTCTTGCACAGCTAGGTGCATTGTCTTGAGTTTAAATTCGCCACTGTCGTTCTaGCACTCTGCCATTGCCATC +
Preference number: 4 (lower is better)
Translates to: RLKSTRSCTARCIVLSLNSPLSF*HSAIAI
Trigger: GATGGCAATGGCAGAGTGCCAGAACGACAGTGGCGA...ATTTAAACTCAAGACAATGCACCTAGCTGTGCAAGACCTAGTGCTCTTAAGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR CCA 90 bp CATCTGACAGAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTAGGCGTCCTCGTGGTCTaGGTCTGGATCTTGCATCTC +
Preference number: 4 (lower is better)
Translates to: HLTENNGSSARQMLNLTVGVLVV*VWILHL
Trigger: GAGATGCAAGATCCAGACCCAGACCACGAGGACGCC...TACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTCTGTCAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CCA 90 bp CATCTGACAGAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTACTGTTGGCGTCCTCGTaGTCTGGGTCTGGATCTTGC +
Preference number: 4 (lower is better)
Translates to: HLTENNGSSARQMLNLTVLLASS*SGSGSC
Trigger: GCAAGATCCAGACCCAGACCACGAGGACGCCAACAG...TACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTCTGTCAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CCA 90 bp ATTGCTTCTTCCATATCATCCATGAGCCCACTGTTCCTTTCACTATCATTGTCACTGTTGGCGTCCTCGTaGTCTGGGTCTGGATCTTGC +
Preference number: 4 (lower is better)
Translates to: IASSISSMSPLFLSLSLSLLASS*SGSGSC
Trigger: GCAAGATCCAGACCCAGACCACGAGGACGCCAACAG...TGACAATGATAGTGAAAGGAACAGTGGGCTCATGGATGATATGGAAGAAGCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CCA 90 bp GACAACACCAATGGGACACACCAAACAGAACTACTTCACAGATACATTCTGTCTCTATCTCCCACATCCTaGCCACATCTGCACCAACGC +
Preference number: 4 (lower is better)
Translates to: DNTNGTHQTELLHRYILSLSPTS*PHLHQR
Trigger: GCGTTGGTGCAGATGTGGCCAGGATGTGGGAGATAG...AGACAGAATGTATCTGTGAAGTAGTTCTGTTTGGTGTGTCCCATTGGTGTTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR CCA 90 bp CATTGCCATCTCTGCATCTTGGACCATTGCTTCTTCCATATCATCCATGAGCCCCTTCGTTATGTGCTCTaGCAACCTGCCCTTTTCACT +
Preference number: 4 (lower is better)
Translates to: HCHLCILDHCFFHIIHEPLRYVL*QPALFT
Trigger: AGTGAAAAGGGCAGGTTGCCAGAGCACATAACGAAG...GGGCTCATGGATGATATGGAAGAAGCAATGGTCCAAGATGCAGAGATGGCAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CCA 90 bp AGTCCTGTAGCCAAGGGTGGCTCAAGGTCTTATCCACACTGTAGCGCTTTCTCACTTCCAGGGATTTGGTaGATACATGAAAGCTGCATT +
Preference number: 4 (lower is better)
Translates to: SPVAKGGSRSYPHCSAFSLPGIW*IHESCI
Trigger: AATGCAGCTTTCATGTATCCACCAAATCCCTGGAAG...TGAGAAAGCGCTACAGTGTGGATAAGACCTTGAGCCACCCTTGGCTACAGGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CCA 90 bp ATCTCTGCATCTTGGACCATTGCTTCTTCCATATCATCCATGAGCCCACTGTTCTCCTGTAGCCAAGGGTaGCTCAAGGTCTTATCCACA +
Preference number: 4 (lower is better)
Translates to: ISASWTIASSISSMSPLFSCSQG*LKVLST
Trigger: TGTGGATAAGACCTTGAGCCACCCTTGGCTACAGGA...GAACAGTGGGCTCATGGATGATATGGAAGAAGCAATGGTCCAAGATGCAGAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp ATTGCTTCTTCCATATCATCCATGAGCCCACTGTTCCTTTCACTATCATTGTCAAGTGAGGGAAACGTTTaGGAGCCTTCTCCGCCTCAC +
Preference number: 4 (lower is better)
Translates to: IASSISSMSPLFLSLSLSSEGNV*EPSPPH
Trigger: GTGAGGCGGAGAAGGCTCTCAAACGTTTCCCTCACT...TGACAATGATAGTGAAAGGAACAGTGGGCTCATGGATGATATGGAAGAAGCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp CTGACAGAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTACTGCAAGCCCTGCCTaGAAAGCCCCTTCAGAAGCT +
Preference number: 4 (lower is better)
Translates to: LTENNGSSARQMLNLTVCTASPA*KAPSEA
Trigger: AGCTTCTGAAGGGGCTTTTCAGGCAGGGCTTGCAGT...ACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTCTGTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp GAGTTTGTTTACAATGACAACACCAATGGGACACACCAAACAGAACTACTTCACCACTCCCTTCTTCCATaGCCACATCAGACTCTGCCC +
Preference number: 4 (lower is better)
Translates to: EFVYNDNTNGTHQTELLHHSLLP*PHQTLP
Trigger: GGGCAGAGTCTGATGTGGTCATGGAAGAAGGGAGTG...GTGAAGTAGTTCTGTTTGGTGTGTCCCATTGGTGTTGTCATTGTAAACAAACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR TCA 90 bp CATCTGACAGAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTACACTCCCTTCTTCCATaGCCACATCAGACTCTGCCC +
Preference number: 4 (lower is better)
Translates to: HLTENNGSSARQMLNLTVHSLLP*PHQTLP
Trigger: GGGCAGAGTCTGATGTGGTCATGGAAGAAGGGAGTG...TACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTCTGTCAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp GCATTTAGGCTTAAGAGCACTAGGTCTTGCACAGCTAGGTGCATTGTCTTGAGTCTTCCATATCATCCATaGGCCCACTGTTCCTTTCAC +
Preference number: 4 (lower is better)
Translates to: AFRLKSTRSCTARCIVLSLPYHP*AHCSFH
Trigger: GTGAAAGGAACAGTGGGCTCATGGATGATATGGAAG...ACTCAAGACAATGCACCTAGCTGTGCAAGACCTAGTGCTCTTAAGCCTAAATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR TCA 90 bp AGAGATATCTCTGTGCAAGTTGGTTCCTGTACCCACGGAGGAGCCCTTGGGAATGATATTGTTGCTTGTTaGTGGACTGATGGTTCTGTT +
Preference number: 4 (lower is better)
Translates to: RDISVQVGSCTHGGALGNDIVAC*WTDGSV
Trigger: AACAGAACCATCAGTCCATCAACAAGCAACAATATC...ATTCCCAAGGGCTCCTCCGTGGGTACAGGAACCAACTTGCACAGAGATATCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp ACCGAGGGCTTTCATTTCTGTTTCTTCAGTCTCAGGAGTGTCACTGTGGCTAGCACGATATTTTTAAAATaGAGGTGCCGCAAAGCCACG +
Preference number: 4 (lower is better)
Translates to: TEGFHFCFFSLRSVTVASTIFLK*RCRKAT
Trigger: CGTGGCTTTGCGGCACCTTCATTTTAAAAATATCGT...GCTAGCCACAGTGACACTCCTGAGACTGAAGAAACAGAAATGAAAGCCCTCGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp TGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTATTTATTAGTTCCAGAACTCAGAGGATGCTaGCACGCTCACCGAGGGCTT +
Preference number: 4 (lower is better)
Translates to: WQFCKANVKPDRMYLLVPELRGC*HAHRGL
Trigger: AAGCCCTCGGTGAGCGTGTCAGCATCCTCTGAGTTC...TGGAACTAATAAATACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR GCA 90 bp GCATTTAGGCTTAAGAGCACTAGGTCTTGCACAGCTAGGTGCATTGTCTTGAGTTCTGATGGTGATTTTTaGAGAAGGGGCTCATCAGGG +
Preference number: 4 (lower is better)
Translates to: AFRLKSTRSCTARCIVLSSDGDF*RRGSSG
Trigger: CCCTGATGAGCCCCTTCTGCAAAAATCACCATCAGA...ACTCAAGACAATGCACCTAGCTGTGCAAGACCTAGTGCTCTTAAGCCTAAATGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR GCA 90 bp GACAACACCAATGGGACACACCAAACAGAACTACTTCACAGATACATTCTGTCTTTGCACTGCAAGCCCTaGCTGAAAAGCCCCTTCAGA +
Preference number: 4 (lower is better)
Translates to: DNTNGTHQTELLHRYILSLHCKP*LKSPFR
Trigger: TCTGAAGGGGCTTTTCAGGCAGGGCTTGCAGTGCAA...AGACAGAATGTATCTGTGAAGTAGTTCTGTTTGGTGTGTCCCATTGGTGTTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR GCA 90 bp GCATTTAGGCTTAAGAGCACTAGGTCTTGCACAGCTAGGTGCATTGTCTTGAGTTGCCATTGCCATCTCTaGATCTTGGACCATTGCTTC +
Preference number: 4 (lower is better)
Translates to: AFRLKSTRSCTARCIVLSCHCHL*ILDHCF
Trigger: GAAGCAATGGTCCAAGATGCAGAGATGGCAATGGCA...ACTCAAGACAATGCACCTAGCTGTGCAAGACCTAGTGCTCTTAAGCCTAAATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR GCA 90 bp TGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTATTTATTAGTTCCATCCGCAGCGTGTCCTTaGTGGTGTAGTGGACCATCC +
Preference number: 4 (lower is better)
Translates to: WQFCKANVKPDRMYLLVPSAACP*WCSGPS
Trigger: GGATGGTCCACTACACCAGCAAGGACACGCTGCGGA...TGGAACTAATAAATACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR GCA 90 bp TGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTATTTATTAGTTCCACATCCTGGCCACATCTaGACCAACGCCACTGGTGAG +
Preference number: 4 (lower is better)
Translates to: WQFCKANVKPDRMYLLVPHPGHI*TNATGE
Trigger: CTCACCAGTGGCGTTGGTGCAGATGTGGCCAGGATG...TGGAACTAATAAATACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR GCA 90 bp ACACCAAACAGAACTACTTCACAGATACATTCTGTCTCTTACCAAAATGAAGCTCAGCCCCTGCTCGCCTaGATACTTCTCCCACCTCAG +
Preference number: 4 (lower is better)
Translates to: TPNRTTSQIHSVSYQNEAQPLLA*ILLPPQ
Trigger: CTGAGGTGGGAGAAGTATGCAGGCGAGCAGGGGCTG...AGCTTCATTTTGGTAAGAGACAGAATGTATCTGTGAAGTAGTTCTGTTTGGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR GCA 90 bp ACACCAAACAGAACTACTTCACAGATACATTCTGTCTCTTACCAAAATGAAGCTGGGTACTGCAGCCCCTaGTCGCCTGCATACTTCTCC +
Preference number: 4 (lower is better)
Translates to: TPNRTTSQIHSVSYQNEAGYCSP*SPAYFS
Trigger: GGAGAAGTATGCAGGCGAGCAGGGGCTGCAGTACCC...AGCTTCATTTTGGTAAGAGACAGAATGTATCTGTGAAGTAGTTCTGTTTGGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR GCA 90 bp AGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATACAAATGCTTCTGAGGTGTGTGGGGTACTaGAGCCCCTGCTCGCCTGCA +
Preference number: 4 (lower is better)
Translates to: RELLLIQHSWSHKIQMLLRCVGY*SPCSPA
Trigger: TGCAGGCGAGCAGGGGCTGCAGTACCCCACACACCT...CAGAAGCATTTGTATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CCA 90 bp AGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATACAAATGCTTCTGTTCCGGAAAAGTCCCTaGGCTGGGGGAGGGCAAGGG +
Preference number: 4 (lower is better)
Translates to: RELLLIQHSWSHKIQMLLFRKSP*AGGGQG
Trigger: CCCTTGCCCTCCCCCAGCCCAGGGACTTTTCCGGAA...CAGAAGCATTTGTATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000331968.11
CDS-3UTR CCA 90 bp ACACCAAACAGAACTACTTCACAGATACATTCTGTCTCTTACCAAAATGAAGCTAGGCCGATCTGCAGATaGAACGAGATGCCCCCGACC +
Preference number: 4 (lower is better)
Translates to: TPNRTTSQIHSVSYQNEARPICR*NEMPPT
Trigger: GGTCGGGGGCATCTCGTTCCATCTGCAGATCGGCCT...AGCTTCATTTTGGTAAGAGACAGAATGTATCTGTGAAGTAGTTCTGTTTGGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331968.11
ENST00000616995.4
CDS-3UTR CCA 90 bp CATCTGACAGAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATCGCCACTGTCGTTCTaGCACTCTGCCATTGCCATC +
Preference number: 4 (lower is better)
Translates to: HLTENNGSSARQMLNLTVSPLSF*HSAIAI
Trigger: GATGGCAATGGCAGAGTGCCAGAACGACAGTGGCGA...TACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTCTGTCAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CCA 90 bp TGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTATTTATTAGTTCCAGGCGTCCTCGTGGTCTaGGTCTGGATCTTGCATCTC +
Preference number: 4 (lower is better)
Translates to: WQFCKANVKPDRMYLLVPGVLVV*VWILHL
Trigger: GAGATGCAAGATCCAGACCCAGACCACGAGGACGCC...TGGAACTAATAAATACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CCA 90 bp TGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTATTTATTAGTTCCACTGTTGGCGTCCTCGTaGTCTGGGTCTGGATCTTGC +
Preference number: 4 (lower is better)
Translates to: WQFCKANVKPDRMYLLVPLLASS*SGSGSC
Trigger: GCAAGATCCAGACCCAGACCACGAGGACGCCAACAG...TGGAACTAATAAATACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CCA 90 bp CTGACAGAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTGCAGCGTGTCCTTGCTaGTGTAGTGGACCATCCATC +
Preference number: 4 (lower is better)
Translates to: LTENNGSSARQMLNLTVCAACPC*CSGPSI
Trigger: GATGGATGGTCCACTACACCAGCAAGGACACGCTGC...ACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTCTGTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CCA 90 bp CATCTGACAGAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTAGCAGCGTGTCCTTGCTaGTGTAGTGGACCATCCATC +
Preference number: 4 (lower is better)
Translates to: HLTENNGSSARQMLNLTVAACPC*CSGPSI
Trigger: GATGGATGGTCCACTACACCAGCAAGGACACGCTGC...TACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTCTGTCAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CCA 90 bp TTAATGGTCACTTCGCCAAGGCAGTTGTTTGGTACTTTCGGTGCACAACGTTTATCCTGTAGCCAAGGGTaGCTCAAGGTCTTATCCACA +
Preference number: 4 (lower is better)
Translates to: LMVTSPRQLFGTFGAQRLSCSQG*LKVLST
Trigger: TGTGGATAAGACCTTGAGCCACCCTTGGCTACAGGA...TAAACGTTGTGCACCGAAAGTACCAAACAACTGCCTTGGCGAAGTGACCATTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CCA 90 bp GCATTTAGGCTTAAGAGCACTAGGTCTTGCACAGCTAGGTGCATTGTCTTGAGTTCAGGAGTGTCACTGTaGCTAGCACTTGGATTGATC +
Preference number: 4 (lower is better)
Translates to: AFRLKSTRSCTARCIVLSSGVSL*LALGLI
Trigger: GATCAATCCAAGTGCTAGCCACAGTGACACTCCTGA...ACTCAAGACAATGCACCTAGCTGTGCAAGACCTAGTGCTCTTAAGCCTAAATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
3UTR CAA 72 bp AAGAGCACTAGGTCTTGCACAGCTAGGTGCATTGTCTaGAGTTTAAATATACTGAGGCACACCAGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: KSTRSCTARCIV*SLNILRHTRQA
Trigger: TGCCTGCCTGGTGTGCCTCAGTATATTTAAACTCAAGACAATGCACCTAGCTGTGCAAGACCTAGTGCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR TCA 90 bp CTGACAGAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTAGAGAGTTCAGCAGATaGTGTGCGGATGGTGCTGAC +
Preference number: 4 (lower is better)
Translates to: LTENNGSSARQMLNLTVCREFSR*CADGAD
Trigger: GTCAGCACCATCCGCACATCATCTGCTGAACTCTCT...ACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTCTGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp TGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTATTTATTAGTTCCAACTGCAAGCCCTGCCTaGAAAGCCCCTTCAGAAGCT +
Preference number: 4 (lower is better)
Translates to: WQFCKANVKPDRMYLLVPTASPA*KAPSEA
Trigger: AGCTTCTGAAGGGGCTTTTCAGGCAGGGCTTGCAGT...TGGAACTAATAAATACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp GACAACACCAATGGGACACACCAAACAGAACTACTTCACAGATACATTCTGTCTTCCTCTTCGTGTGTTTaGCAGACTGCACTACCCTCA +
Preference number: 4 (lower is better)
Translates to: DNTNGTHQTELLHRYILSSSSCV*QTALPS
Trigger: TGAGGGTAGTGCAGTCTGTCAAACACACGAAGAGGA...AGACAGAATGTATCTGTGAAGTAGTTCTGTTTGGTGTGTCCCATTGGTGTTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR TCA 90 bp GTTTCGTGTTTCAGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATAGGGGGTACCCACCACTaGCCTCCGGAAAGACTTCTC +
Preference number: 4 (lower is better)
Translates to: VSCFRELLLIQHSWSHKIGGTHH*PPERLL
Trigger: GAGAAGTCTTTCCGGAGGTCAGTGGTGGGTACCCCC...TATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCTGAAACACGAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp ACCGAGGGCTTTCATTTCTGTTTCTTCAGTCTCAGGAGTGTCACTGTGGCTAGCATGAAAGCTGCATTCTaGATTTGGTCGTGTATGTCT +
Preference number: 4 (lower is better)
Translates to: TEGFHFCFFSLRSVTVASMKAAF*IWSCMS
Trigger: AGACATACACGACCAAATTCAGAATGCAGCTTTCAT...GCTAGCCACAGTGACACTCCTGAGACTGAAGAAACAGAAATGAAAGCCCTCGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp AGAGATATCTCTGTGCAAGTTGGTTCCTGTACCCACGGAGGAGCCCTTGGGAATGATTTGGTGGATACATaGAAGCTGCATTCTGAATTT +
Preference number: 4 (lower is better)
Translates to: RDISVQVGSCTHGGALGNDLVDT*KLHSEF
Trigger: AAATTCAGAATGCAGCTTTCATGTATCCACCAAATC...ATTCCCAAGGGCTCCTCCGTGGGTACAGGAACCAACTTGCACAGAGATATCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp GCATTTAGGCTTAAGAGCACTAGGTCTTGCACAGCTAGGTGCATTGTCTTGAGTAGGTTGCTGAGCAGCTaGTTTTCCATAGTACAACAG +
Preference number: 4 (lower is better)
Translates to: AFRLKSTRSCTARCIVLSRLLSS*FSIVQQ
Trigger: CTGTTGTACTATGGAAAATCAGCTGCTCAGCAACCT...ACTCAAGACAATGCACCTAGCTGTGCAAGACCTAGTGCTCTTAAGCCTAAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331968.11
ENST00000616995.4
CDS-3UTR GCA 90 bp GGAGTTGTTCATAGAACACTGGAAATAATCGACTCTTCAAGAGTTTGTTTACAACGGCTCAGGCCGATCTaGAGATGGAACGAGATGCCC +
Preference number: 4 (lower is better)
Translates to: GVVHRTLEIIDSSRVCLQRLRPI*RWNEMP
Trigger: GGGCATCTCGTTCCATCTGCAGATCGGCCTGAGCCG...TTGTAAACAAACTCTTGAAGAGTCGATTATTTCCAGTGTTCTATGAACAACTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331968.11
ENST00000616995.4
CDS-3UTR GCA 90 bp CTGACAGAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTTTGCACTGCAAGCCCTaGCTGAAAAGCCCCTTCAGA +
Preference number: 4 (lower is better)
Translates to: LTENNGSSARQMLNLTVCLHCKP*LKSPFR
Trigger: TCTGAAGGGGCTTTTCAGGCAGGGCTTGCAGTGCAA...ACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTCTGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR GCA 90 bp AGACACCCTACATTCTACAATAAACTAAGTCATCCCCAAGAAGTCTTTCTTCATCATCCTGGCCACATCTaGACCAACGCCACTGGTGAG +
Preference number: 4 (lower is better)
Translates to: RHPTFYNKLSHPQEVFLHHPGHI*TNATGE
Trigger: CTCACCAGTGGCGTTGGTGCAGATGTGGCCAGGATG...ATGAAGAAAGACTTCTTGGGGATGACTTAGTTTATTGTAGAATGTAGGGTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546371.1
CDS-3UTR GCA 90 bp GAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTATTTATCAGCCCCTGCTCGCCTaGATACTTCTCCCACCTCAG +
Preference number: 4 (lower is better)
Translates to: ENNGSSARQMLNLTVCIYQPLLA*ILLPPQ
Trigger: CTGAGGTGGGAGAAGTATGCAGGCGAGCAGGGGCTG...ATAAATACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR GCA 90 bp AGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATACAAATGCTTCTGCAGCCCCTGCTCGCCTaGATACTTCTCCCACCTCAG +
Preference number: 4 (lower is better)
Translates to: RELLLIQHSWSHKIQMLLQPLLA*ILLPPQ
Trigger: CTGAGGTGGGAGAAGTATGCAGGCGAGCAGGGGCTG...CAGAAGCATTTGTATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR GCA 90 bp AGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATACAAATGCTTCTGGGGTACTGCAGCCCCTaGTCGCCTGCATACTTCTCC +
Preference number: 4 (lower is better)
Translates to: RELLLIQHSWSHKIQMLLGYCSP*SPAYFS
Trigger: GGAGAAGTATGCAGGCGAGCAGGGGCTGCAGTACCC...CAGAAGCATTTGTATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR GCA 90 bp TCGTGTTTCAGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATACAAGGGTACTGCAGCCCCTaGTCGCCTGCATACTTCTCC +
Preference number: 4 (lower is better)
Translates to: SCFRELLLIQHSWSHKIQGYCSP*SPAYFS
Trigger: GGAGAAGTATGCAGGCGAGCAGGGGCTGCAGTACCC...TTGTATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCTGAAACACGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CCA 90 bp GTTTCGTGTTTCAGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATAAGGCCGATCTGCAGATaGAACGAGATGCCCCCGACC +
Preference number: 4 (lower is better)
Translates to: VSCFRELLLIQHSWSHKIRPICR*NEMPPT
Trigger: GGTCGGGGGCATCTCGTTCCATCTGCAGATCGGCCT...TATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCTGAAACACGAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
CDS-3UTR CCA 90 bp CTGACAGAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTACTTCTGGTCGACAATaGAGCAAGCCATCTCGCGGA +
Preference number: 4 (lower is better)
Translates to: LTENNGSSARQMLNLTVCTSGRQ*SKPSRG
Trigger: TCCGCGAGATGGCTTGCTCCATTGTCGACCAGAAGT...ACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTCTGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331968.11
ENST00000415220.6
CDS-3UTR CCA 90 bp ACACACCAAACAGAACTACTTCACAGATACATTCTGTCTCTTACCAAAATGAAGAGCTTCTTGCAGTACTaGCACACTGTGGGCCGGGTG +
Preference number: 4 (lower is better)
Translates to: THQTELLHRYILSLTKMKSFLQY*HTVGRV
Trigger: CACCCGGCCCACAGTGTGCCAGTACTGCAAGAAGCT...CTTCATTTTGGTAAGAGACAGAATGTATCTGTGAAGTAGTTCTGTTTGGTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR CCA 90 bp TGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTATTTATTAGTTCCATCGCCACTGTCGTTCTaGCACTCTGCCATTGCCATC +
Preference number: 4 (lower is better)
Translates to: WQFCKANVKPDRMYLLVPSPLSF*HSAIAI
Trigger: GATGGCAATGGCAGAGTGCCAGAACGACAGTGGCGA...TGGAACTAATAAATACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CCA 90 bp ATTTTCTCCCACATAATACACTACATTTGCCGTAGTGATTTCGAAACAATGAGGGGCGTCCTCGTGGTCTaGGTCTGGATCTTGCATCTC +
Preference number: 4 (lower is better)
Translates to: IFSHIIHYICRSDFETMRGVLVV*VWILHL
Trigger: GAGATGCAAGATCCAGACCCAGACCACGAGGACGCC...CCTCATTGTTTCGAAATCACTACGGCAAATGTAGTGTATTATGTGGGAGAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CCA 90 bp CATCTGACAGAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTAGGCATAAGGGCATGCTaGATGGCTATCTCCCACATC +
Preference number: 4 (lower is better)
Translates to: HLTENNGSSARQMLNLTVGIRAC*MAISHI
Trigger: GATGTGGGAGATAGCCATCCAGCATGCCCTTATGCC...TACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTCTGTCAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CCA 90 bp AGGCTTAAGAGCACTAGGTCTTGCACAGCTAGGTGCATTGTCTTGAGTTTAAATTCCTGTAGCCAAGGGTaGCTCAAGGTCTTATCCACA +
Preference number: 4 (lower is better)
Translates to: RLKSTRSCTARCIVLSLNSCSQG*LKVLST
Trigger: TGTGGATAAGACCTTGAGCCACCCTTGGCTACAGGA...ATTTAAACTCAAGACAATGCACCTAGCTGTGCAAGACCTAGTGCTCTTAAGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR CCA 90 bp AGGCTTAAGAGCACTAGGTCTTGCACAGCTAGGTGCATTGTCTTGAGTTTAAATACTGTGGCTAGCACTTaGATTGATCAGGTGTGTGGG +
Preference number: 4 (lower is better)
Translates to: RLKSTRSCTARCIVLSLNTVAST*IDQVCG
Trigger: CCCACACACCTGATCAATCCAAGTGCTAGCCACAGT...ATTTAAACTCAAGACAATGCACCTAGCTGTGCAAGACCTAGTGCTCTTAAGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR CCA 90 bp AGTCTCAGGAGTGTCACTGTGGCTAGCACTTGGATTGATCAGGTGTGTGGGGTATCTGTTGATTTGTCTTaGCAACTCAGATACATCAAC +
Preference number: 4 (lower is better)
Translates to: SLRSVTVASTWIDQVCGVSVDLS*QLRYIN
Trigger: GTTGATGTATCTGAGTTGCCAAGACAAATCAACAGA...TACCCCACACACCTGATCAATCCAAGTGCTAGCCACAGTGACACTCCTGAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
3UTR CAA 72 bp TCTTTCATGACTGTGCTGCTTTTCCTCTTCGTGTGTTaGACAGACTGCACTACCCTCATGAGTGGGATATTG +
Preference number: 4 (lower is better)
Translates to: SFMTVLLFLFVC*TDCTTLMSGIL
Trigger: CAATATCCCACTCATGAGGGTAGTGCAGTCTGTCAAACACACGAAGAGGAAAAGCAGCACAGTCATGAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp CATCTGACAGAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTAGCCGCTTTCACCAGCTaGAGGATGTTTTCAGAGGTA +
Preference number: 4 (lower is better)
Translates to: HLTENNGSSARQMLNLTVAAFTS*RMFSEV
Trigger: TACCTCTGAAAACATCCTTCAGCTGGTGAAAGCGGC...TACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTCTGTCAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp AGGCTTAAGAGCACTAGGTCTTGCACAGCTAGGTGCATTGTCTTGAGTTTAAATAAAGGTGGCGGAAGCTaGCAAGACCACTTCAATAAG +
Preference number: 4 (lower is better)
Translates to: RLKSTRSCTARCIVLSLNKGGGS*QDHFNK
Trigger: CTTATTGAAGTGGTCTTGTCAGCTTCCGCCACCTTT...ATTTAAACTCAAGACAATGCACCTAGCTGTGCAAGACCTAGTGCTCTTAAGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331968.11
ENST00000616995.4
CDS-3UTR TCA 90 bp ACACCAAACAGAACTACTTCACAGATACATTCTGTCTCTTACCAAAATGAAGCTGCGTGGGGACGAATCTaGAAGTCTTCAAAGGTGGCG +
Preference number: 4 (lower is better)
Translates to: TPNRTTSQIHSVSYQNEAAWGRI*KSSKVA
Trigger: CGCCACCTTTGAAGACTTTCAGATTCGTCCCCACGC...AGCTTCATTTTGGTAAGAGACAGAATGTATCTGTGAAGTAGTTCTGTTTGGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR TCA 90 bp CATCTGACAGAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTAGGAGCTCTGTATGAATaGACAAAGAGAGCGTGGGGA +
Preference number: 4 (lower is better)
Translates to: HLTENNGSSARQMLNLTVGALYE*TKRAWG
Trigger: TCCCCACGCTCTCTTTGTTCATTCATACAGAGCTCC...TACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTCTGTCAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp CTGACAGAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTGGAGCTCTGTATGAATaGACAAAGAGAGCGTGGGGA +
Preference number: 4 (lower is better)
Translates to: LTENNGSSARQMLNLTVCGALYE*TKRAWG
Trigger: TCCCCACGCTCTCTTTGTTCATTCATACAGAGCTCC...ACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTCTGTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp ACACACCAAACAGAACTACTTCACAGATACATTCTGTCTCTTACCAAAATGAAGAGTGAGGGAAACGTTTaGGAGCCTTCTCCGCCTCAC +
Preference number: 4 (lower is better)
Translates to: THQTELLHRYILSLTKMKSEGNV*EPSPPH
Trigger: GTGAGGCGGAGAAGGCTCTCAAACGTTTCCCTCACT...CTTCATTTTGGTAAGAGACAGAATGTATCTGTGAAGTAGTTCTGTTTGGTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR TCA 90 bp TGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTATTTATTAGTTCCAAGAGAGTTCAGCAGATaGTGTGCGGATGGTGCTGAC +
Preference number: 4 (lower is better)
Translates to: WQFCKANVKPDRMYLLVPREFSR*CADGAD
Trigger: GTCAGCACCATCCGCACATCATCTGCTGAACTCTCT...TGGAACTAATAAATACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp ACACCAAACAGAACTACTTCACAGATACATTCTGTCTCTTACCAAAATGAAGCTACTGCAAGCCCTGCCTaGAAAGCCCCTTCAGAAGCT +
Preference number: 4 (lower is better)
Translates to: TPNRTTSQIHSVSYQNEATASPA*KAPSEA
Trigger: AGCTTCTGAAGGGGCTTTTCAGGCAGGGCTTGCAGT...AGCTTCATTTTGGTAAGAGACAGAATGTATCTGTGAAGTAGTTCTGTTTGGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR TCA 90 bp GACAACACCAATGGGACACACCAAACAGAACTACTTCACAGATACATTCTGTCTACTGCACTACCCTCATaGGTGGGATATTGTTGCTTG +
Preference number: 4 (lower is better)
Translates to: DNTNGTHQTELLHRYILSTALPS*VGYCCL
Trigger: CAAGCAACAATATCCCACTCATGAGGGTAGTGCAGT...AGACAGAATGTATCTGTGAAGTAGTTCTGTTTGGTGTGTCCCATTGGTGTTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR TCA 90 bp CATCTGACAGAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTACACCAACGCCACTGGTaGGAACACTGTTATTTGGTG +
Preference number: 4 (lower is better)
Translates to: HLTENNGSSARQMLNLTVHQRHW*EHCYLV
Trigger: CACCAAATAACAGTGTTCTCACCAGTGGCGTTGGTG...TACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTCTGTCAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp ATTGCTTCTTCCATATCATCCATGAGCCCACTGTTCCTTTCACTATCATTGTCACACCAACGCCACTGGTaGGAACACTGTTATTTGGTG +
Preference number: 4 (lower is better)
Translates to: IASSISSMSPLFLSLSLSHQRHW*EHCYLV
Trigger: CACCAAATAACAGTGTTCTCACCAGTGGCGTTGGTG...TGACAATGATAGTGAAAGGAACAGTGGGCTCATGGATGATATGGAAGAAGCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp GAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTATTTATGAACTCAGAGGATGCTaGCACGCTCACCGAGGGCTT +
Preference number: 4 (lower is better)
Translates to: ENNGSSARQMLNLTVCIYELRGC*HAHRGL
Trigger: AAGCCCTCGGTGAGCGTGTCAGCATCCTCTGAGTTC...ATAAATACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp GCATTTAGGCTTAAGAGCACTAGGTCTTGCACAGCTAGGTGCATTGTCTTGAGTAAAAATACACAAAGGTaGAAGGTTGCTGAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: AFRLKSTRSCTARCIVLSKNTQR*KVAEQL
Trigger: CAGCTGCTCAGCAACCTTTCACCTTTGTGTATTTTT...ACTCAAGACAATGCACCTAGCTGTGCAAGACCTAGTGCTCTTAAGCCTAAATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331968.11
ENST00000616995.4
CDS-3UTR GCA 90 bp CAAGATCATTTCCAGCATGTCTCCATGGAGTTTTTCCATAACAACAAACACTCTCTGGCACTCTGCCATTaGCATCTCTGCATCTTGGAC +
Preference number: 4 (lower is better)
Translates to: QDHFQHVSMEFFHNNKHSLALCH*HLCILD
Trigger: GTCCAAGATGCAGAGATGGCAATGGCAGAGTGCCAG...AGAGTGTTTGTTGTTATGGAAAAACTCCATGGAGACATGCTGGAAATGATCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR GCA 90 bp TGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTATTTATTAGTTCCATCTGGGTCTGGATCTTaGATCTCGCCACTGTCGTTC +
Preference number: 4 (lower is better)
Translates to: WQFCKANVKPDRMYLLVPSGSGS*ISPLSF
Trigger: GAACGACAGTGGCGAGATGCAAGATCCAGACCCAGA...TGGAACTAATAAATACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR GCA 90 bp TCGTGTTTCAGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATACAATCCGCAGCGTGTCCTTaGTGGTGTAGTGGACCATCC +
Preference number: 4 (lower is better)
Translates to: SCFRELLLIQHSWSHKIQSAACP*WCSGPS
Trigger: GGATGGTCCACTACACCAGCAAGGACACGCTGCGGA...TTGTATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCTGAAACACGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR GCA 90 bp CTTTTATTTAGACACCCTACATTCTACAATAAACTAAGTCATCCCCAAGAAGTCTCCGCAGCGTGTCCTTaGTGGTGTAGTGGACCATCC +
Preference number: 4 (lower is better)
Translates to: LLFRHPTFYNKLSHPQEVSAACP*WCSGPS
Trigger: GGATGGTCCACTACACCAGCAAGGACACGCTGCGGA...GACTTCTTGGGGATGACTTAGTTTATTGTAGAATGTAGGGTGTCTAAATAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546371.1
CDS-3UTR GCA 90 bp GAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTATTTATTCCGCAGCGTGTCCTTaGTGGTGTAGTGGACCATCC +
Preference number: 4 (lower is better)
Translates to: ENNGSSARQMLNLTVCIYSAACP*WCSGPS
Trigger: GGATGGTCCACTACACCAGCAAGGACACGCTGCGGA...ATAAATACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR GCA 90 bp TCGTGTTTCAGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATACAACATCCTGGCCACATCTaGACCAACGCCACTGGTGAG +
Preference number: 4 (lower is better)
Translates to: SCFRELLLIQHSWSHKIQHPGHI*TNATGE
Trigger: CTCACCAGTGGCGTTGGTGCAGATGTGGCCAGGATG...TTGTATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCTGAAACACGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR GCA 90 bp CACCCTACATTCTACAATAAACTAAGTCATCCCCAAGAAGTCTTTCTTCATTCTACGGGCATAAGGGCATaGTGGATGGCTATCTCCCAC +
Preference number: 4 (lower is better)
Translates to: HPTFYNKLSHPQEVFLHSTGIRA*WMAISH
Trigger: GTGGGAGATAGCCATCCAGCATGCCCTTATGCCCGT...AGAATGAAGAAAGACTTCTTGGGGATGACTTAGTTTATTGTAGAATGTAGGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546371.1
CDS-3UTR GCA 90 bp ACACACCAAACAGAACTACTTCACAGATACATTCTGTCTCTTACCAAAATGAAGACGGGCATAAGGGCATaGTGGATGGCTATCTCCCAC +
Preference number: 4 (lower is better)
Translates to: THQTELLHRYILSLTKMKTGIRA*WMAISH
Trigger: GTGGGAGATAGCCATCCAGCATGCCCTTATGCCCGT...CTTCATTTTGGTAAGAGACAGAATGTATCTGTGAAGTAGTTCTGTTTGGTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR CCA 90 bp ATTGCTTCTTCCATATCATCCATGAGCCCACTGTTCCTTTCACTATCATTGTCACTTCCTGGATATCACTaGCCGCTTTCACCAGCTGAA +
Preference number: 4 (lower is better)
Translates to: IASSISSMSPLFLSLSLSLPGYH*PLSPAE
Trigger: TTCAGCTGGTGAAAGCGGCCAGTGATATCCAGGAAG...TGACAATGATAGTGAAAGGAACAGTGGGCTCATGGATGATATGGAAGAAGCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CCA 90 bp GGAGTTGTTCATAGAACACTGGAAATAATCGACTCTTCAAGAGTTTGTTTACAAAGTACTGGCACACTGTaGGCCGGGTGTAGGAGTGGA +
Preference number: 4 (lower is better)
Translates to: GVVHRTLEIIDSSRVCLQSTGTL*AGCRSG
Trigger: TCCACTCCTACACCCGGCCCACAGTGTGCCAGTACT...TTGTAAACAAACTCTTGAAGAGTCGATTATTTCCAGTGTTCTATGAACAACTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR CCA 90 bp AGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATACAAATGCTTCTGAGTACTGGCACACTGTaGGCCGGGTGTAGGAGTGGA +
Preference number: 4 (lower is better)
Translates to: RELLLIQHSWSHKIQMLLSTGTL*AGCRSG
Trigger: TCCACTCCTACACCCGGCCCACAGTGTGCCAGTACT...CAGAAGCATTTGTATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CCA 90 bp AGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATACAAATGCTTCTGAGCTTCTTGCAGTACTaGCACACTGTGGGCCGGGTG +
Preference number: 4 (lower is better)
Translates to: RELLLIQHSWSHKIQMLLSFLQY*HTVGRV
Trigger: CACCCGGCCCACAGTGTGCCAGTACTGCAAGAAGCT...CAGAAGCATTTGTATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CCA 90 bp ATCTCTGCATCTTGGACCATTGCTTCTTCCATATCATCCATGAGCCCACTGTTCGGTGCACAACGTTTATaGCAGTTGAATCTGCAATCT +
Preference number: 4 (lower is better)
Translates to: ISASWTIASSISSMSPLFGAQRL*QLNLQS
Trigger: AGATTGCAGATTCAACTGCCATAAACGTTGTGCACC...GAACAGTGGGCTCATGGATGATATGGAAGAAGCAATGGTCCAAGATGCAGAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CCA 90 bp TCGTGTTTCAGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATACAACTGTTGGCGTCCTCGTaGTCTGGGTCTGGATCTTGC +
Preference number: 4 (lower is better)
Translates to: SCFRELLLIQHSWSHKIQLLASS*SGSGSC
Trigger: GCAAGATCCAGACCCAGACCACGAGGACGCCAACAG...TTGTATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCTGAAACACGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CCA 90 bp AGACACCCTACATTCTACAATAAACTAAGTCATCCCCAAGAAGTCTTTCTTCATCTATCTCCCACATCCTaGCCACATCTGCACCAACGC +
Preference number: 4 (lower is better)
Translates to: RHPTFYNKLSHPQEVFLHLSPTS*PHLHQR
Trigger: GCGTTGGTGCAGATGTGGCCAGGATGTGGGAGATAG...ATGAAGAAAGACTTCTTGGGGATGACTTAGTTTATTGTAGAATGTAGGGTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546371.1
CDS-3UTR CCA 90 bp ACACCAAACAGAACTACTTCACAGATACATTCTGTCTCTTACCAAAATGAAGCTCTATCTCCCACATCCTaGCCACATCTGCACCAACGC +
Preference number: 4 (lower is better)
Translates to: TPNRTTSQIHSVSYQNEALSPTS*PHLHQR
Trigger: GCGTTGGTGCAGATGTGGCCAGGATGTGGGAGATAG...AGCTTCATTTTGGTAAGAGACAGAATGTATCTGTGAAGTAGTTCTGTTTGGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR CCA 90 bp GACAACACCAATGGGACACACCAAACAGAACTACTTCACAGATACATTCTGTCTCTTCGTTATGTGCTCTaGCAACCTGCCCTTTTCACT +
Preference number: 4 (lower is better)
Translates to: DNTNGTHQTELLHRYILSLRYVL*QPALFT
Trigger: AGTGAAAAGGGCAGGTTGCCAGAGCACATAACGAAG...AGACAGAATGTATCTGTGAAGTAGTTCTGTTTGGTGTGTCCCATTGGTGTTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR CCA 90 bp GCATTTAGGCTTAAGAGCACTAGGTCTTGCACAGCTAGGTGCATTGTCTTGAGTCTTCCAGGGATTTGGTaGATACATGAAAGCTGCATT +
Preference number: 4 (lower is better)
Translates to: AFRLKSTRSCTARCIVLSLPGIW*IHESCI
Trigger: AATGCAGCTTTCATGTATCCACCAAATCCCTGGAAG...ACTCAAGACAATGCACCTAGCTGTGCAAGACCTAGTGCTCTTAAGCCTAAATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR CCA 90 bp GAGTTTGTTTACAATGACAACACCAATGGGACACACCAAACAGAACTACTTCACACTGTGGCTAGCACTTaGATTGATCAGGTGTGTGGG +
Preference number: 4 (lower is better)
Translates to: EFVYNDNTNGTHQTELLHTVAST*IDQVCG
Trigger: CCCACACACCTGATCAATCCAAGTGCTAGCCACAGT...GTGAAGTAGTTCTGTTTGGTGTGTCCCATTGGTGTTGTCATTGTAAACAAACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR CCA 90 bp CTGACAGAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTACTGTGGCTAGCACTTaGATTGATCAGGTGTGTGGG +
Preference number: 4 (lower is better)
Translates to: LTENNGSSARQMLNLTVCTVAST*IDQVCG
Trigger: CCCACACACCTGATCAATCCAAGTGCTAGCCACAGT...ACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTCTGTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
3UTR CAA 72 bp ATATCATCCATGAGCCCACTGTTCCTTTCACTATCATaGTCATCACTCCCTTCTTCCATGACCACATCAGAC +
Preference number: 4 (lower is better)
Translates to: ISSMSPLFLSLS*SSLPSSMTTSD
Trigger: GTCTGATGTGGTCATGGAAGAAGGGAGTGATGACAATGATAGTGAAAGGAACAGTGGGCTCATGGATGATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp GAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTATTTATGCGTGGGGACGAATCTaGAAGTCTTCAAAGGTGGCG +
Preference number: 4 (lower is better)
Translates to: ENNGSSARQMLNLTVCIYAWGRI*KSSKVA
Trigger: CGCCACCTTTGAAGACTTTCAGATTCGTCCCCACGC...ATAAATACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp GTTTCGTGTTTCAGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATAAGTGAGGGAAACGTTTaGGAGCCTTCTCCGCCTCAC +
Preference number: 4 (lower is better)
Translates to: VSCFRELLLIQHSWSHKISEGNV*EPSPPH
Trigger: GTGAGGCGGAGAAGGCTCTCAAACGTTTCCCTCACT...TATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCTGAAACACGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp GCATTTAGGCTTAAGAGCACTAGGTCTTGCACAGCTAGGTGCATTGTCTTGAGTCGTCCAATGTATGATTaGGAATTTGACCTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: AFRLKSTRSCTARCIVLSRPMYD*EFDLFS
Trigger: AGAGAAGAGGTCAAATTCTCAATCATACATTGGACG...ACTCAAGACAATGCACCTAGCTGTGCAAGACCTAGTGCTCTTAAGCCTAAATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR TCA 90 bp AGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATACAAATGCTTCTGACTGCAAGCCCTGCCTaGAAAGCCCCTTCAGAAGCT +
Preference number: 4 (lower is better)
Translates to: RELLLIQHSWSHKIQMLLTASPA*KAPSEA
Trigger: AGCTTCTGAAGGGGCTTTTCAGGCAGGGCTTGCAGT...CAGAAGCATTTGTATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp TCGTGTTTCAGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATACAACACTCCCTTCTTCCATaGCCACATCAGACTCTGCCC +
Preference number: 4 (lower is better)
Translates to: SCFRELLLIQHSWSHKIQHSLLP*PHQTLP
Trigger: GGGCAGAGTCTGATGTGGTCATGGAAGAAGGGAGTG...TTGTATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCTGAAACACGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp GGAGTTGTTCATAGAACACTGGAAATAATCGACTCTTCAAGAGTTTGTTTACAACACTCCCTTCTTCCATaGCCACATCAGACTCTGCCC +
Preference number: 4 (lower is better)
Translates to: GVVHRTLEIIDSSRVCLQHSLLP*PHQTLP
Trigger: GGGCAGAGTCTGATGTGGTCATGGAAGAAGGGAGTG...TTGTAAACAAACTCTTGAAGAGTCGATTATTTCCAGTGTTCTATGAACAACTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR TCA 90 bp CATCTGACAGAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTACTTCCATATCATCCATaGGCCCACTGTTCCTTTCAC +
Preference number: 4 (lower is better)
Translates to: HLTENNGSSARQMLNLTVLPYHP*AHCSFH
Trigger: GTGAAAGGAACAGTGGGCTCATGGATGATATGGAAG...TACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTCTGTCAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp GCATTTAGGCTTAAGAGCACTAGGTCTTGCACAGCTAGGTGCATTGTCTTGAGTTACAAATGCTTCTGTTaGTTTGTCTTGGCAACTCAG +
Preference number: 4 (lower is better)
Translates to: AFRLKSTRSCTARCIVLSYKCFC*FVLATQ
Trigger: CTGAGTTGCCAAGACAAATCAACAGAAGCATTTGTA...ACTCAAGACAATGCACCTAGCTGTGCAAGACCTAGTGCTCTTAAGCCTAAATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR GCA 90 bp TGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTATTTATTAGTTCCACTGCAATCTTTGCACTaGAAGCCCTGCCTGAAAAGC +
Preference number: 4 (lower is better)
Translates to: WQFCKANVKPDRMYLLVPLQSLH*KPCLKS
Trigger: GCTTTTCAGGCAGGGCTTGCAGTGCAAAGATTGCAG...TGGAACTAATAAATACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR GCA 90 bp ACACACCAAACAGAACTACTTCACAGATACATTCTGTCTCTTACCAAAATGAAGGACCACATCAGACTCTaGCCCAGGGCTAAGCAAATC +
Preference number: 4 (lower is better)
Translates to: THQTELLHRYILSLTKMKDHIRL*PRAKQI
Trigger: GATTTGCTTAGCCCTGGGGCAGAGTCTGATGTGGTC...CTTCATTTTGGTAAGAGACAGAATGTATCTGTGAAGTAGTTCTGTTTGGTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR GCA 90 bp ATCTCTGCATCTTGGACCATTGCTTCTTCCATATCATCCATGAGCCCACTGTTCTGCATCTTGGACCATTaGTTCTTCCATATCATCCAT +
Preference number: 4 (lower is better)
Translates to: ISASWTIASSISSMSPLFCILDH*FFHIIH
Trigger: ATGGATGATATGGAAGAAGCAATGGTCCAAGATGCA...GAACAGTGGGCTCATGGATGATATGGAAGAAGCAATGGTCCAAGATGCAGAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR GCA 90 bp ACACACCAAACAGAACTACTTCACAGATACATTCTGTCTCTTACCAAAATGAAGTCTGGGTCTGGATCTTaGATCTCGCCACTGTCGTTC +
Preference number: 4 (lower is better)
Translates to: THQTELLHRYILSLTKMKSGSGS*ISPLSF
Trigger: GAACGACAGTGGCGAGATGCAAGATCCAGACCCAGA...CTTCATTTTGGTAAGAGACAGAATGTATCTGTGAAGTAGTTCTGTTTGGTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR GCA 90 bp TGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTATTTATTAGTTCCAGTGTGTTTGACAGACTaGACTACCCTCATGAGTGGG +
Preference number: 4 (lower is better)
Translates to: WQFCKANVKPDRMYLLVPVCLTD*TTLMSG
Trigger: CCCACTCATGAGGGTAGTGCAGTCTGTCAAACACAC...TGGAACTAATAAATACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR GCA 90 bp AGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATACAAATGCTTCTGACGGGCATAAGGGCATaGTGGATGGCTATCTCCCAC +
Preference number: 4 (lower is better)
Translates to: RELLLIQHSWSHKIQMLLTGIRA*WMAISH
Trigger: GTGGGAGATAGCCATCCAGCATGCCCTTATGCCCGT...CAGAAGCATTTGTATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR GCA 90 bp GAGTTTGTTTACAATGACAACACCAATGGGACACACCAAACAGAACTACTTCACTGTGCTCTGGCAACCTaGCCTTTTCACTTGACAAGA +
Preference number: 4 (lower is better)
Translates to: EFVYNDNTNGTHQTELLHCALAT*PFHLTR
Trigger: TCTTGTCAAGTGAAAAGGGCAGGTTGCCAGAGCACA...GTGAAGTAGTTCTGTTTGGTGTGTCCCATTGGTGTTGTCATTGTAAACAAACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR CCA 90 bp TGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTATTTATTAGTTCCACATTCAGGGAACTTCTaGTCGACAATGGAGCAAGCC +
Preference number: 4 (lower is better)
Translates to: WQFCKANVKPDRMYLLVPHSGNF*STMEQA
Trigger: GGCTTGCTCCATTGTCGACCAGAAGTTCCCTGAATG...TGGAACTAATAAATACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331968.11
ENST00000415220.6
CDS-3UTR CCA 90 bp CATCTGACAGAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTAGAAAGTCTTCAAAGGTaGCGGAAGCTGACAAGACCA +
Preference number: 4 (lower is better)
Translates to: HLTENNGSSARQMLNLTVESLQR*RKLTRP
Trigger: TGGTCTTGTCAGCTTCCGCCACCTTTGAAGACTTTC...TACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTCTGTCAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651616.1
CDS-3UTR CCA 90 bp TGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTATTTATTAGTTCCAGCCAAGGCAGTTGTTTaGTACTTTCGGTGCACAACG +
Preference number: 4 (lower is better)
Translates to: WQFCKANVKPDRMYLLVPAKAVV*YFRCTT
Trigger: CGTTGTGCACCGAAAGTACCAAACAACTGCCTTGGC...TGGAACTAATAAATACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CCA 90 bp GGAGTTGTTCATAGAACACTGGAAATAATCGACTCTTCAAGAGTTTGTTTACAACTCGTGGTCTGGGTCTaGATCTTGCATCTCGCCACT +
Preference number: 4 (lower is better)
Translates to: GVVHRTLEIIDSSRVCLQLVVWV*ILHLAT
Trigger: AGTGGCGAGATGCAAGATCCAGACCCAGACCACGAG...TTGTAAACAAACTCTTGAAGAGTCGATTATTTCCAGTGTTCTATGAACAACTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR CCA 90 bp GTTTCGTGTTTCAGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATACTCGTGGTCTGGGTCTaGATCTTGCATCTCGCCACT +
Preference number: 4 (lower is better)
Translates to: VSCFRELLLIQHSWSHKILVVWV*ILHLAT
Trigger: AGTGGCGAGATGCAAGATCCAGACCCAGACCACGAG...TATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCTGAAACACGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CCA 90 bp TCGTGTTTCAGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATACAACTCGTGGTCTGGGTCTaGATCTTGCATCTCGCCACT +
Preference number: 4 (lower is better)
Translates to: SCFRELLLIQHSWSHKIQLVVWV*ILHLAT
Trigger: AGTGGCGAGATGCAAGATCCAGACCCAGACCACGAG...TTGTATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCTGAAACACGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CCA 90 bp TTTAGACACCCTACATTCTACAATAAACTAAGTCATCCCCAAGAAGTCTTTCTTGCAGCGTGTCCTTGCTaGTGTAGTGGACCATCCATC +
Preference number: 4 (lower is better)
Translates to: FRHPTFYNKLSHPQEVFLAACPC*CSGPSI
Trigger: GATGGATGGTCCACTACACCAGCAAGGACACGCTGC...AAGAAAGACTTCTTGGGGATGACTTAGTTTATTGTAGAATGTAGGGTGTCTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546371.1
CDS-3UTR CCA 90 bp GGAGTTGTTCATAGAACACTGGAAATAATCGACTCTTCAAGAGTTTGTTTACAAGCAGCGTGTCCTTGCTaGTGTAGTGGACCATCCATC +
Preference number: 4 (lower is better)
Translates to: GVVHRTLEIIDSSRVCLQAACPC*CSGPSI
Trigger: GATGGATGGTCCACTACACCAGCAAGGACACGCTGC...TTGTAAACAAACTCTTGAAGAGTCGATTATTTCCAGTGTTCTATGAACAACTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR CCA 90 bp GTTTCGTGTTTCAGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATACTATCTCCCACATCCTaGCCACATCTGCACCAACGC +
Preference number: 4 (lower is better)
Translates to: VSCFRELLLIQHSWSHKILSPTS*PHLHQR
Trigger: GCGTTGGTGCAGATGTGGCCAGGATGTGGGAGATAG...TATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCTGAAACACGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CCA 90 bp GAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTATTTATCTATCTCCCACATCCTaGCCACATCTGCACCAACGC +
Preference number: 4 (lower is better)
Translates to: ENNGSSARQMLNLTVCIYLSPTS*PHLHQR
Trigger: GCGTTGGTGCAGATGTGGCCAGGATGTGGGAGATAG...ATAAATACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CCA 90 bp AGACACCCTACATTCTACAATAAACTAAGTCATCCCCAAGAAGTCTTTCTTCATGGCATAAGGGCATGCTaGATGGCTATCTCCCACATC +
Preference number: 4 (lower is better)
Translates to: RHPTFYNKLSHPQEVFLHGIRAC*MAISHI
Trigger: GATGTGGGAGATAGCCATCCAGCATGCCCTTATGCC...ATGAAGAAAGACTTCTTGGGGATGACTTAGTTTATTGTAGAATGTAGGGTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546371.1
CDS-3UTR CCA 90 bp TGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTATTTATTAGTTCCATATCTCTGTGCAAGTTaGTTCCTGTACCCACGGAGG +
Preference number: 4 (lower is better)
Translates to: WQFCKANVKPDRMYLLVPYLCAS*FLYPRR
Trigger: CCTCCGTGGGTACAGGAACCAACTTGCACAGAGATA...TGGAACTAATAAATACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CCA 90 bp CTGACAGAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTCTTCGTTATGTGCTCTaGCAACCTGCCCTTTTCACT +
Preference number: 4 (lower is better)
Translates to: LTENNGSSARQMLNLTVCLRYVL*QPALFT
Trigger: AGTGAAAAGGGCAGGTTGCCAGAGCACATAACGAAG...ACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTCTGTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CCA 90 bp TGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTATTTATTAGTTCCATCCTGTAGCCAAGGGTaGCTCAAGGTCTTATCCACA +
Preference number: 4 (lower is better)
Translates to: WQFCKANVKPDRMYLLVPSCSQG*LKVLST
Trigger: TGTGGATAAGACCTTGAGCCACCCTTGGCTACAGGA...TGGAACTAATAAATACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CCA 90 bp CTGGTTCCAGAGACAAAATTTCAGATAAAGGAATTTCCTTGTAGTACCTGCTTCACTGTGGCTAGCACTTaGATTGATCAGGTGTGTGGG +
Preference number: 4 (lower is better)
Translates to: LVPETKFQIKEFPCSTCFTVAST*IDQVCG
Trigger: CCCACACACCTGATCAATCCAAGTGCTAGCCACAGT...GAAGCAGGTACTACAAGGAAATTCCTTTATCTGAAATTTTGTCTCTGGAACCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CCA 90 bp CACCCTACATTCTACAATAAACTAAGTCATCCCCAAGAAGTCTTTCTTCATTCTACTCACTGTGCAAGTTaGTTCCTGTACCCACGGAGG +
Preference number: 4 (lower is better)
Translates to: HPTFYNKLSHPQEVFLHSTHCAS*FLYPRR
Trigger: CCTCCGTGGGTACAGGAACCAACTTGCACAGTGAGT...AGAATGAAGAAAGACTTCTTGGGGATGACTTAGTTTATTGTAGAATGTAGGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546371.1
CDS-3UTR TCA 90 bp ACACACCAAACAGAACTACTTCACAGATACATTCTGTCTCTTACCAAAATGAAGGCCGCTTTCACCAGCTaGAGGATGTTTTCAGAGGTA +
Preference number: 4 (lower is better)
Translates to: THQTELLHRYILSLTKMKAAFTS*RMFSEV
Trigger: TACCTCTGAAAACATCCTTCAGCTGGTGAAAGCGGC...CTTCATTTTGGTAAGAGACAGAATGTATCTGTGAAGTAGTTCTGTTTGGTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR TCA 90 bp ATTTTCTCCCACATAATACACTACATTTGCCGTAGTGATTTCGAAACAATGAGGGGAGCTCTGTATGAATaGACAAAGAGAGCGTGGGGA +
Preference number: 4 (lower is better)
Translates to: IFSHIIHYICRSDFETMRGALYE*TKRAWG
Trigger: TCCCCACGCTCTCTTTGTTCATTCATACAGAGCTCC...CCTCATTGTTTCGAAATCACTACGGCAAATGTAGTGTATTATGTGGGAGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp GAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTATTTATTCACATTTAAGACCTTaGCGTACCAGCCCCCACAGC +
Preference number: 4 (lower is better)
Translates to: ENNGSSARQMLNLTVCIYSHLRP*RTSPHS
Trigger: GCTGTGGGGGCTGGTACGTCAAGGTCTTAAATGTGA...ATAAATACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp AGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATACAAATGCTTCTGTCACATTTAAGACCTTaGCGTACCAGCCCCCACAGC +
Preference number: 4 (lower is better)
Translates to: RELLLIQHSWSHKIQMLLSHLRP*RTSPHS
Trigger: GCTGTGGGGGCTGGTACGTCAAGGTCTTAAATGTGA...CAGAAGCATTTGTATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp TGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTATTTATTAGTTCCACTTCCATATCATCCATaGGCCCACTGTTCCTTTCAC +
Preference number: 4 (lower is better)
Translates to: WQFCKANVKPDRMYLLVPLPYHP*AHCSFH
Trigger: GTGAAAGGAACAGTGGGCTCATGGATGATATGGAAG...TGGAACTAATAAATACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp ACACCAAACAGAACTACTTCACAGATACATTCTGTCTCTTACCAAAATGAAGCTTCCTCTTCGTGTGTTTaGCAGACTGCACTACCCTCA +
Preference number: 4 (lower is better)
Translates to: TPNRTTSQIHSVSYQNEASSSCV*QTALPS
Trigger: TGAGGGTAGTGCAGTCTGTCAAACACACGAAGAGGA...AGCTTCATTTTGGTAAGAGACAGAATGTATCTGTGAAGTAGTTCTGTTTGGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR TCA 90 bp TTAATGGTCACTTCGCCAAGGCAGTTGTTTGGTACTTTCGGTGCACAACGTTTACTTCCTGTGTCATTCTaGAAGAGGGTAATACATTTG +
Preference number: 4 (lower is better)
Translates to: LMVTSPRQLFGTFGAQRLLPVSF*KRVIHL
Trigger: CAAATGTATTACCCTCTTTCAGAATGACACAGGAAG...TAAACGTTGTGCACCGAAAGTACCAAACAACTGCCTTGGCGAAGTGACCATTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp CTGACAGAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTAACACTGTTATTTGGTaGTGGGCTGGAAGGATTGAC +
Preference number: 4 (lower is better)
Translates to: LTENNGSSARQMLNLTVCNTVIW*WAGRID
Trigger: GTCAATCCTTCCAGCCCATCACCAAATAACAGTGTT...ACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTCTGTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp ACACCAAACAGAACTACTTCACAGATACATTCTGTCTCTTACCAAAATGAAGCTCACCAACGCCACTGGTaGGAACACTGTTATTTGGTG +
Preference number: 4 (lower is better)
Translates to: TPNRTTSQIHSVSYQNEAHQRHW*EHCYLV
Trigger: CACCAAATAACAGTGTTCTCACCAGTGGCGTTGGTG...AGCTTCATTTTGGTAAGAGACAGAATGTATCTGTGAAGTAGTTCTGTTTGGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR TCA 90 bp AGGCTTAAGAGCACTAGGTCTTGCACAGCTAGGTGCATTGTCTTGAGTTTAAATACGATATTTTTAAAATaGAGGTGCCGCAAAGCCACG +
Preference number: 4 (lower is better)
Translates to: RLKSTRSCTARCIVLSLNTIFLK*RCRKAT
Trigger: CGTGGCTTTGCGGCACCTTCATTTTAAAAATATCGT...ATTTAAACTCAAGACAATGCACCTAGCTGTGCAAGACCTAGTGCTCTTAAGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR TCA 90 bp AGGCTTAAGAGCACTAGGTCTTGCACAGCTAGGTGCATTGTCTTGAGTTTAAATAAGACTTCTCTCCAATaGTCCGGGCAAAACCAAAAT +
Preference number: 4 (lower is better)
Translates to: RLKSTRSCTARCIVLSLNKTSLQ*SGQNQN
Trigger: ATTTTGGTTTTGCCCGGATCATTGGAGAGAAGTCTT...ATTTAAACTCAAGACAATGCACCTAGCTGTGCAAGACCTAGTGCTCTTAAGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR TCA 90 bp GACAACACCAATGGGACACACCAAACAGAACTACTTCACAGATACATTCTGTCTAGATCAATGGCTTCATaGGATATTTCCTTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: DNTNGTHQTELLHRYILSRSMAS*DISFQG
Trigger: TCCCTGGAAGGAAATATCTCATGAAGCCATTGATCT...AGACAGAATGTATCTGTGAAGTAGTTCTGTTTGGTGTGTCCCATTGGTGTTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR TCA 90 bp CTGGTTCCAGAGACAAAATTTCAGATAAAGGAATTTCCTTGTAGTACCTGCTTCGATCCATCTACACAATaGAGTTGTGGCAATCCCAGG +
Preference number: 4 (lower is better)
Translates to: LVPETKFQIKEFPCSTCFDPSTQ*SCGNPR
Trigger: CCTGGGATTGCCACAACTTCATTGTGTAGATGGATC...GAAGCAGGTACTACAAGGAAATTCCTTTATCTGAAATTTTGTCTCTGGAACCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651571.1
CDS-3UTR GCA 90 bp GTTTCGTGTTTCAGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATAGACCACATCAGACTCTaGCCCAGGGCTAAGCAAATC +
Preference number: 4 (lower is better)
Translates to: VSCFRELLLIQHSWSHKIDHIRL*PRAKQI
Trigger: GATTTGCTTAGCCCTGGGGCAGAGTCTGATGTGGTC...TATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCTGAAACACGAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR GCA 90 bp GAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTATTTATGACCACATCAGACTCTaGCCCAGGGCTAAGCAAATC +
Preference number: 4 (lower is better)
Translates to: ENNGSSARQMLNLTVCIYDHIRL*PRAKQI
Trigger: GATTTGCTTAGCCCTGGGGCAGAGTCTGATGTGGTC...ATAAATACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR GCA 90 bp TGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTATTTATTAGTTCCATGCCATTGCCATCTCTaGATCTTGGACCATTGCTTC +
Preference number: 4 (lower is better)
Translates to: WQFCKANVKPDRMYLLVPCHCHL*ILDHCF
Trigger: GAAGCAATGGTCCAAGATGCAGAGATGGCAATGGCA...TGGAACTAATAAATACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR GCA 90 bp TCGTGTTTCAGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATACAACTGGCACTCTGCCATTaGCATCTCTGCATCTTGGAC +
Preference number: 4 (lower is better)
Translates to: SCFRELLLIQHSWSHKIQLALCH*HLCILD
Trigger: GTCCAAGATGCAGAGATGGCAATGGCAGAGTGCCAG...TTGTATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCTGAAACACGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR GCA 90 bp GAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTATTTATCTGGCACTCTGCCATTaGCATCTCTGCATCTTGGAC +
Preference number: 4 (lower is better)
Translates to: ENNGSSARQMLNLTVCIYLALCH*HLCILD
Trigger: GTCCAAGATGCAGAGATGGCAATGGCAGAGTGCCAG...ATAAATACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR GCA 90 bp GGAGTTGTTCATAGAACACTGGAAATAATCGACTCTTCAAGAGTTTGTTTACAACTGGCACTCTGCCATTaGCATCTCTGCATCTTGGAC +
Preference number: 4 (lower is better)
Translates to: GVVHRTLEIIDSSRVCLQLALCH*HLCILD
Trigger: GTCCAAGATGCAGAGATGGCAATGGCAGAGTGCCAG...TTGTAAACAAACTCTTGAAGAGTCGATTATTTCCAGTGTTCTATGAACAACTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR GCA 90 bp GTTTCGTGTTTCAGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATAGTCGTTCTGGCACTCTaGCATTGCCATCTCTGCATC +
Preference number: 4 (lower is better)
Translates to: VSCFRELLLIQHSWSHKIVVLAL*HCHLCI
Trigger: GATGCAGAGATGGCAATGGCAGAGTGCCAGAACGAC...TATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCTGAAACACGAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR GCA 90 bp AGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATACAAATGCTTCTGGTCGTTCTGGCACTCTaGCATTGCCATCTCTGCATC +
Preference number: 4 (lower is better)
Translates to: RELLLIQHSWSHKIQMLLVVLAL*HCHLCI
Trigger: GATGCAGAGATGGCAATGGCAGAGTGCCAGAACGAC...CAGAAGCATTTGTATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR GCA 90 bp TCGTGTTTCAGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATACAATCTGGGTCTGGATCTTaGATCTCGCCACTGTCGTTC +
Preference number: 4 (lower is better)
Translates to: SCFRELLLIQHSWSHKIQSGSGS*ISPLSF
Trigger: GAACGACAGTGGCGAGATGCAAGATCCAGACCCAGA...TTGTATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCTGAAACACGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR GCA 90 bp AGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATACAAATGCTTCTGTCTGGGTCTGGATCTTaGATCTCGCCACTGTCGTTC +
Preference number: 4 (lower is better)
Translates to: RELLLIQHSWSHKIQMLLSGSGS*ISPLSF
Trigger: GAACGACAGTGGCGAGATGCAAGATCCAGACCCAGA...CAGAAGCATTTGTATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR GCA 90 bp CATCTGACAGAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTAACAGAGATATCTCTGTaGAAGTTGGTTCCTGTACCC +
Preference number: 4 (lower is better)
Translates to: HLTENNGSSARQMLNLTVTEISL*KLVPVP
Trigger: GGGTACAGGAACCAACTTGCACAGAGATATCTCTGT...TACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTCTGTCAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR GCA 90 bp CTGGTTCCAGAGACAAAATTTCAGATAAAGGAATTTCCTTGTAGTACCTGCTTCTGTGCTCTGGCAACCTaGCCTTTTCACTTGACAAGA +
Preference number: 4 (lower is better)
Translates to: LVPETKFQIKEFPCSTCFCALAT*PFHLTR
Trigger: TCTTGTCAAGTGAAAAGGGCAGGTTGCCAGAGCACA...GAAGCAGGTACTACAAGGAAATTCCTTTATCTGAAATTTTGTCTCTGGAACCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR GCA 90 bp TGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTATTTATTAGTTCCAAAGAGCACTAGGTCTTaGACAGCTAGGTGCATTGTC +
Preference number: 4 (lower is better)
Translates to: WQFCKANVKPDRMYLLVPKSTRS*TARCIV
Trigger: GACAATGCACCTAGCTGTGCAAGACCTAGTGCTCTT...TGGAACTAATAAATACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR GCA 90 bp TTTAGACACCCTACATTCTACAATAAACTAAGTCATCCCCAAGAAGTCTTTCTTCTGGCAGACTCACTGTaGAAGTTGGTTCCTGTACCC +
Preference number: 4 (lower is better)
Translates to: FRHPTFYNKLSHPQEVFLLADSL*KLVPVP
Trigger: GGGTACAGGAACCAACTTGCACAGTGAGTCTGCCAG...AAGAAAGACTTCTTGGGGATGACTTAGTTTATTGTAGAATGTAGGGTGTCTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546371.1
CDS-3UTR CCA 90 bp AGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATACAAATGCTTCTGACTTCTGGTCGACAATaGAGCAAGCCATCTCGCGGA +
Preference number: 4 (lower is better)
Translates to: RELLLIQHSWSHKIQMLLTSGRQ*SKPSRG
Trigger: TCCGCGAGATGGCTTGCTCCATTGTCGACCAGAAGT...CAGAAGCATTTGTATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331968.11
ENST00000415220.6
CDS-3UTR CCA 90 bp ACACACCAAACAGAACTACTTCACAGATACATTCTGTCTCTTACCAAAATGAAGCATTCAGGGAACTTCTaGTCGACAATGGAGCAAGCC +
Preference number: 4 (lower is better)
Translates to: THQTELLHRYILSLTKMKHSGNF*STMEQA
Trigger: GGCTTGCTCCATTGTCGACCAGAAGTTCCCTGAATG...CTTCATTTTGGTAAGAGACAGAATGTATCTGTGAAGTAGTTCTGTTTGGTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331968.11
CDS-3UTR CCA 90 bp TGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTATTTATTAGTTCCAATAAGATCGCCTTCCTaGATATCACTGGCCGCTTTC +
Preference number: 4 (lower is better)
Translates to: WQFCKANVKPDRMYLLVPIRSPS*ISLAAF
Trigger: GAAAGCGGCCAGTGATATCCAGGAAGGCGATCTTAT...TGGAACTAATAAATACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CCA 90 bp CTGACAGAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTGCCATCTCTGCATCTTaGACCATTGCTTCTTCCATA +
Preference number: 4 (lower is better)
Translates to: LTENNGSSARQMLNLTVCAISAS*TIASSI
Trigger: TATGGAAGAAGCAATGGTCCAAGATGCAGAGATGGC...ACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTCTGTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CCA 90 bp GTTTCGTGTTTCAGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATAGGCATAAGGGCATGCTaGATGGCTATCTCCCACATC +
Preference number: 4 (lower is better)
Translates to: VSCFRELLLIQHSWSHKIGIRAC*MAISHI
Trigger: GATGTGGGAGATAGCCATCCAGCATGCCCTTATGCC...TATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCTGAAACACGAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CCA 90 bp ACACCAAACAGAACTACTTCACAGATACATTCTGTCTCTTACCAAAATGAAGCTTATCTCTGTGCAAGTTaGTTCCTGTACCCACGGAGG +
Preference number: 4 (lower is better)
Translates to: TPNRTTSQIHSVSYQNEAYLCAS*FLYPRR
Trigger: CCTCCGTGGGTACAGGAACCAACTTGCACAGAGATA...AGCTTCATTTTGGTAAGAGACAGAATGTATCTGTGAAGTAGTTCTGTTTGGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR CCA 90 bp CATCTGACAGAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATTCCTTCCAGGGATTTaGTGGATACATGAAAGCTGC +
Preference number: 4 (lower is better)
Translates to: HLTENNGSSARQMLNLTVFLPGI*WIHESC
Trigger: GCAGCTTTCATGTATCCACCAAATCCCTGGAAGGAA...TACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTCTGTCAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp GTTTCGTGTTTCAGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATAGCCGCTTTCACCAGCTaGAGGATGTTTTCAGAGGTA +
Preference number: 4 (lower is better)
Translates to: VSCFRELLLIQHSWSHKIAAFTS*RMFSEV
Trigger: TACCTCTGAAAACATCCTTCAGCTGGTGAAAGCGGC...TATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCTGAAACACGAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp TCGTGTTTCAGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATACAAGCCGCTTTCACCAGCTaGAGGATGTTTTCAGAGGTA +
Preference number: 4 (lower is better)
Translates to: SCFRELLLIQHSWSHKIQAAFTS*RMFSEV
Trigger: TACCTCTGAAAACATCCTTCAGCTGGTGAAAGCGGC...TTGTATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCTGAAACACGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp TCGTGTTTCAGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATACAAGGAGCTCTGTATGAATaGACAAAGAGAGCGTGGGGA +
Preference number: 4 (lower is better)
Translates to: SCFRELLLIQHSWSHKIQGALYE*TKRAWG
Trigger: TCCCCACGCTCTCTTTGTTCATTCATACAGAGCTCC...TTGTATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCTGAAACACGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp GACAACACCAATGGGACACACCAAACAGAACTACTTCACAGATACATTCTGTCTAACGTTTATGGCAGTTaGATCTGCAATCTTTGCACT +
Preference number: 4 (lower is better)
Translates to: DNTNGTHQTELLHRYILSNVYGS*ICNLCT
Trigger: AGTGCAAAGATTGCAGATTCAACTGCCATAAACGTT...AGACAGAATGTATCTGTGAAGTAGTTCTGTTTGGTGTGTCCCATTGGTGTTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR TCA 90 bp AGGCTTAAGAGCACTAGGTCTTGCACAGCTAGGTGCATTGTCTTGAGTTTAAATGATATTGTTGCTTGTTaGTGGACTGATGGTTCTGTT +
Preference number: 4 (lower is better)
Translates to: RLKSTRSCTARCIVLSLNDIVAC*WTDGSV
Trigger: AACAGAACCATCAGTCCATCAACAAGCAACAATATC...ATTTAAACTCAAGACAATGCACCTAGCTGTGCAAGACCTAGTGCTCTTAAGCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR TCA 90 bp TCGTGTTTCAGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATACAATCCTCTTCGTGTGTTTaGCAGACTGCACTACCCTCA +
Preference number: 4 (lower is better)
Translates to: SCFRELLLIQHSWSHKIQSSSCV*QTALPS
Trigger: TGAGGGTAGTGCAGTCTGTCAAACACACGAAGAGGA...TTGTATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCTGAAACACGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp GGAGTTGTTCATAGAACACTGGAAATAATCGACTCTTCAAGAGTTTGTTTACAATCCTCTTCGTGTGTTTaGCAGACTGCACTACCCTCA +
Preference number: 4 (lower is better)
Translates to: GVVHRTLEIIDSSRVCLQSSSCV*QTALPS
Trigger: TGAGGGTAGTGCAGTCTGTCAAACACACGAAGAGGA...TTGTAAACAAACTCTTGAAGAGTCGATTATTTCCAGTGTTCTATGAACAACTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR TCA 90 bp AGGCTTAAGAGCACTAGGTCTTGCACAGCTAGGTGCATTGTCTTGAGTTTAAATCTTCCTGTGTCATTCTaGAAGAGGGTAATACATTTG +
Preference number: 4 (lower is better)
Translates to: RLKSTRSCTARCIVLSLNLPVSF*KRVIHL
Trigger: CAAATGTATTACCCTCTTTCAGAATGACACAGGAAG...ATTTAAACTCAAGACAATGCACCTAGCTGTGCAAGACCTAGTGCTCTTAAGCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR TCA 90 bp TGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTATTTATTAGTTCCAGTGATTTCGAAACAATaGGGATTGGCCCCATTAGGA +
Preference number: 4 (lower is better)
Translates to: WQFCKANVKPDRMYLLVPVISKQ*GLAPLG
Trigger: TCCTAATGGGGCCAATCCTCATTGTTTCGAAATCAC...TGGAACTAATAAATACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp AGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATACAAATGCTTCTGCACCAACGCCACTGGTaGGAACACTGTTATTTGGTG +
Preference number: 4 (lower is better)
Translates to: RELLLIQHSWSHKIQMLLHQRHW*EHCYLV
Trigger: CACCAAATAACAGTGTTCTCACCAGTGGCGTTGGTG...CAGAAGCATTTGTATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp CTTTTATTTAGACACCCTACATTCTACAATAAACTAAGTCATCCCCAAGAAGTCCACCAACGCCACTGGTaGGAACACTGTTATTTGGTG +
Preference number: 4 (lower is better)
Translates to: LLFRHPTFYNKLSHPQEVHQRHW*EHCYLV
Trigger: CACCAAATAACAGTGTTCTCACCAGTGGCGTTGGTG...GACTTCTTGGGGATGACTTAGTTTATTGTAGAATGTAGGGTGTCTAAATAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546371.1
CDS-3UTR TCA 90 bp CTGACAGAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTACGATATTTTTAAAATaGAGGTGCCGCAAAGCCACG +
Preference number: 4 (lower is better)
Translates to: LTENNGSSARQMLNLTVCTIFLK*RCRKAT
Trigger: CGTGGCTTTGCGGCACCTTCATTTTAAAAATATCGT...ACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTCTGTCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp CTGACAGAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTAAGACTTCTCTCCAATaGTCCGGGCAAAACCAAAAT +
Preference number: 4 (lower is better)
Translates to: LTENNGSSARQMLNLTVCKTSLQ*SGQNQN
Trigger: ATTTTGGTTTTGCCCGGATCATTGGAGAGAAGTCTT...ACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTCTGTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp CATCTGACAGAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTAAGATCAATGGCTTCATaGGATATTTCCTTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: HLTENNGSSARQMLNLTVRSMAS*DISFQG
Trigger: TCCCTGGAAGGAAATATCTCATGAAGCCATTGATCT...TACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTCTGTCAGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp GAGTTTGTTTACAATGACAACACCAATGGGACACACCAAACAGAACTACTTCACAGATCAATGGCTTCATaGGATATTTCCTTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: EFVYNDNTNGTHQTELLHRSMAS*DISFQG
Trigger: TCCCTGGAAGGAAATATCTCATGAAGCCATTGATCT...GTGAAGTAGTTCTGTTTGGTGTGTCCCATTGGTGTTGTCATTGTAAACAAACTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR TCA 90 bp CATCTGACAGAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTAAAAAATACACAAAGGTaGAAGGTTGCTGAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: HLTENNGSSARQMLNLTVKNTQR*KVAEQL
Trigger: CAGCTGCTCAGCAACCTTTCACCTTTGTGTATTTTT...TACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTCTGTCAGATG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000331968.11
ENST00000616995.4
CDS-3UTR GCA 90 bp AGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATACAAATGCTTCTGCTGCAATCTTTGCACTaGAAGCCCTGCCTGAAAAGC +
Preference number: 4 (lower is better)
Translates to: RELLLIQHSWSHKIQMLLLQSLH*KPCLKS
Trigger: GCTTTTCAGGCAGGGCTTGCAGTGCAAAGATTGCAG...CAGAAGCATTTGTATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR GCA 90 bp ACACCAAACAGAACTACTTCACAGATACATTCTGTCTCTTACCAAAATGAAGCTTGCCATTGCCATCTCTaGATCTTGGACCATTGCTTC +
Preference number: 4 (lower is better)
Translates to: TPNRTTSQIHSVSYQNEACHCHL*ILDHCF
Trigger: GAAGCAATGGTCCAAGATGCAGAGATGGCAATGGCA...AGCTTCATTTTGGTAAGAGACAGAATGTATCTGTGAAGTAGTTCTGTTTGGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR GCA 90 bp GAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTATTTATGTGTGTTTGACAGACTaGACTACCCTCATGAGTGGG +
Preference number: 4 (lower is better)
Translates to: ENNGSSARQMLNLTVCIYVCLTD*TTLMSG
Trigger: CCCACTCATGAGGGTAGTGCAGTCTGTCAAACACAC...ATAAATACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR GCA 90 bp AGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATACAAATGCTTCTGGTGTGTTTGACAGACTaGACTACCCTCATGAGTGGG +
Preference number: 4 (lower is better)
Translates to: RELLLIQHSWSHKIQMLLVCLTD*TTLMSG
Trigger: CCCACTCATGAGGGTAGTGCAGTCTGTCAAACACAC...CAGAAGCATTTGTATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR GCA 90 bp GGAGTTGTTCATAGAACACTGGAAATAATCGACTCTTCAAGAGTTTGTTTACAAGTGTGTTTGACAGACTaGACTACCCTCATGAGTGGG +
Preference number: 4 (lower is better)
Translates to: GVVHRTLEIIDSSRVCLQVCLTD*TTLMSG
Trigger: CCCACTCATGAGGGTAGTGCAGTCTGTCAAACACAC...TTGTAAACAAACTCTTGAAGAGTCGATTATTTCCAGTGTTCTATGAACAACTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR GCA 90 bp TGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTATTTATTAGTTCCAACAGAGATATCTCTGTaGAAGTTGGTTCCTGTACCC +
Preference number: 4 (lower is better)
Translates to: WQFCKANVKPDRMYLLVPTEISL*KLVPVP
Trigger: GGGTACAGGAACCAACTTGCACAGAGATATCTCTGT...TGGAACTAATAAATACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR GCA 90 bp ACACCAAACAGAACTACTTCACAGATACATTCTGTCTCTTACCAAAATGAAGCTTGTGCTCTGGCAACCTaGCCTTTTCACTTGACAAGA +
Preference number: 4 (lower is better)
Translates to: TPNRTTSQIHSVSYQNEACALAT*PFHLTR
Trigger: TCTTGTCAAGTGAAAAGGGCAGGTTGCCAGAGCACA...AGCTTCATTTTGGTAAGAGACAGAATGTATCTGTGAAGTAGTTCTGTTTGGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR GCA 90 bp CTGACAGAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTAAAAACTTCGTTATGTaGTCTGGCAACCTGCCCTTT +
Preference number: 4 (lower is better)
Translates to: LTENNGSSARQMLNLTVCKNFVM*SGNLPF
Trigger: AAAGGGCAGGTTGCCAGAGCACATAACGAAGTTTTT...ACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTCTGTCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR GCA 90 bp TCGTGTTTCAGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATACAAAGCGCTCCCCGATTTTaGATTCCAGCTCTCGCAAAT +
Preference number: 4 (lower is better)
Translates to: SCFRELLLIQHSWSHKIQSAPRF*IPALAN
Trigger: ATTTGCGAGAGCTGGAATGCAAAATCGGGGAGCGCT...TTGTATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCTGAAACACGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR GCA 90 bp AGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATACAAATGCTTCTGAGCGCTCCCCGATTTTaGATTCCAGCTCTCGCAAAT +
Preference number: 4 (lower is better)
Translates to: RELLLIQHSWSHKIQMLLSAPRF*IPALAN
Trigger: ATTTGCGAGAGCTGGAATGCAAAATCGGGGAGCGCT...CAGAAGCATTTGTATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR GCA 90 bp CATCTGACAGAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATCTGATGGTGATTTTTaGTCAAAGCCAGGACTCACA +
Preference number: 4 (lower is better)
Translates to: HLTENNGSSARQMLNLTVSDGDF*SKPGLT
Trigger: TGTGAGTCCTGGCTTTGAGCAAAAATCACCATCAGA...TACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTCTGTCAGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000415220.6
ENST00000651616.1
CDS-3UTR CCA 90 bp TCGTGTTTCAGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATACAACTTCCTGGATATCACTaGCCGCTTTCACCAGCTGAA +
Preference number: 4 (lower is better)
Translates to: SCFRELLLIQHSWSHKIQLPGYH*PLSPAE
Trigger: TTCAGCTGGTGAAAGCGGCCAGTGATATCCAGGAAG...TTGTATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCTGAAACACGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CCA 90 bp AGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATACAAATGCTTCTGCTTCCTGGATATCACTaGCCGCTTTCACCAGCTGAA +
Preference number: 4 (lower is better)
Translates to: RELLLIQHSWSHKIQMLLLPGYH*PLSPAE
Trigger: TTCAGCTGGTGAAAGCGGCCAGTGATATCCAGGAAG...CAGAAGCATTTGTATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CCA 90 bp CATCTGACAGAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTAGGTGCACAACGTTTATaGCAGTTGAATCTGCAATCT +
Preference number: 4 (lower is better)
Translates to: HLTENNGSSARQMLNLTVGAQRL*QLNLQS
Trigger: AGATTGCAGATTCAACTGCCATAAACGTTGTGCACC...TACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTCTGTCAGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CCA 90 bp GTTTCGTGTTTCAGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATAGCCAAGGCAGTTGTTTaGTACTTTCGGTGCACAACG +
Preference number: 4 (lower is better)
Translates to: VSCFRELLLIQHSWSHKIAKAVV*YFRCTT
Trigger: CGTTGTGCACCGAAAGTACCAAACAACTGCCTTGGC...TATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCTGAAACACGAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CCA 90 bp GAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTATTTATGCCAAGGCAGTTGTTTaGTACTTTCGGTGCACAACG +
Preference number: 4 (lower is better)
Translates to: ENNGSSARQMLNLTVCIYAKAVV*YFRCTT
Trigger: CGTTGTGCACCGAAAGTACCAAACAACTGCCTTGGC...ATAAATACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CCA 90 bp GAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTATTTATTATCTCTGTGCAAGTTaGTTCCTGTACCCACGGAGG +
Preference number: 4 (lower is better)
Translates to: ENNGSSARQMLNLTVCIYYLCAS*FLYPRR
Trigger: CCTCCGTGGGTACAGGAACCAACTTGCACAGAGATA...ATAAATACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CCA 90 bp GAGTTTGTTTACAATGACAACACCAATGGGACACACCAAACAGAACTACTTCACCTTCCAGGGATTTGGTaGATACATGAAAGCTGCATT +
Preference number: 4 (lower is better)
Translates to: EFVYNDNTNGTHQTELLHLPGIW*IHESCI
Trigger: AATGCAGCTTTCATGTATCCACCAAATCCCTGGAAG...GTGAAGTAGTTCTGTTTGGTGTGTCCCATTGGTGTTGTCATTGTAAACAAACTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR CCA 90 bp TGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTATTTATTAGTTCCATTCCTTCCAGGGATTTaGTGGATACATGAAAGCTGC +
Preference number: 4 (lower is better)
Translates to: WQFCKANVKPDRMYLLVPFLPGI*WIHESC
Trigger: GCAGCTTTCATGTATCCACCAAATCCCTGGAAGGAA...TGGAACTAATAAATACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CCA 90 bp GAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTATTTATTCCTGTAGCCAAGGGTaGCTCAAGGTCTTATCCACA +
Preference number: 4 (lower is better)
Translates to: ENNGSSARQMLNLTVCIYSCSQG*LKVLST
Trigger: TGTGGATAAGACCTTGAGCCACCCTTGGCTACAGGA...ATAAATACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CCA 90 bp TCGTGTTTCAGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATACAAACTGTGGCTAGCACTTaGATTGATCAGGTGTGTGGG +
Preference number: 4 (lower is better)
Translates to: SCFRELLLIQHSWSHKIQTVAST*IDQVCG
Trigger: CCCACACACCTGATCAATCCAAGTGCTAGCCACAGT...TTGTATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCTGAAACACGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CCA 90 bp CACCCTACATTCTACAATAAACTAAGTCATCCCCAAGAAGTCTTTCTTCATTCTGGCTGGTTAGAAAACTaGCAGACTCACTGTGCAAGT +
Preference number: 4 (lower is better)
Translates to: HPTFYNKLSHPQEVFLHSGWLEN*QTHCAS
Trigger: ACTTGCACAGTGAGTCTGCCAGTTTTCTAACCAGCC...AGAATGAAGAAAGACTTCTTGGGGATGACTTAGTTTATTGTAGAATGTAGGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546371.1
CDS-3UTR CCA 90 bp ACACACCAAACAGAACTACTTCACAGATACATTCTGTCTCTTACCAAAATGAAGACTTTTGATCGACAATaGAGCAAGCCATCTCGCGGA +
Preference number: 4 (lower is better)
Translates to: THQTELLHRYILSLTKMKTFDRQ*SKPSRG
Trigger: TCCGCGAGATGGCTTGCTCCATTGTCGATCAAAAGT...CTTCATTTTGGTAAGAGACAGAATGTATCTGTGAAGTAGTTCTGTTTGGTGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616995.4
CDS-3UTR CCA 90 bp ATTGCTTCTTCCATATCATCCATGAGCCCACTGTTCCTTTCACTATCATTGTCAGAAAGTCTTCAAAGGTaGCGGAAGCTTTATCTAGCA +
Preference number: 4 (lower is better)
Translates to: IASSISSMSPLFLSLSLSESLQR*RKLYLA
Trigger: TGCTAGATAAAGCTTCCGCCACCTTTGAAGACTTTC...TGACAATGATAGTGAAAGGAACAGTGGGCTCATGGATGATATGGAAGAAGCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651571.1
CDS-3UTR TCA 90 bp TCGTGTTTCAGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATACAAAAAGGTGGCGGAAGCTaGCAAGACCACTTCAATAAG +
Preference number: 4 (lower is better)
Translates to: SCFRELLLIQHSWSHKIQKGGGS*QDHFNK
Trigger: CTTATTGAAGTGGTCTTGTCAGCTTCCGCCACCTTT...TTGTATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCTGAAACACGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651616.1
CDS-3UTR TCA 90 bp GTTTCGTGTTTCAGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATAAAAGGTGGCGGAAGCTaGCAAGACCACTTCAATAAG +
Preference number: 4 (lower is better)
Translates to: VSCFRELLLIQHSWSHKIKGGGS*QDHFNK
Trigger: CTTATTGAAGTGGTCTTGTCAGCTTCCGCCACCTTT...TATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCTGAAACACGAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651616.1
CDS-3UTR TCA 90 bp TCGTGTTTCAGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATACAACTTCCATATCATCCATaGGCCCACTGTTCCTTTCAC +
Preference number: 4 (lower is better)
Translates to: SCFRELLLIQHSWSHKIQLPYHP*AHCSFH
Trigger: GTGAAAGGAACAGTGGGCTCATGGATGATATGGAAG...TTGTATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCTGAAACACGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp CATCTGACAGAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTAGATATTGTTGCTTGTTaGTGGACTGATGGTTCTGTT +
Preference number: 4 (lower is better)
Translates to: HLTENNGSSARQMLNLTVDIVAC*WTDGSV
Trigger: AACAGAACCATCAGTCCATCAACAAGCAACAATATC...TACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTCTGTCAGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp CTGACAGAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTGATATTGTTGCTTGTTaGTGGACTGATGGTTCTGTT +
Preference number: 4 (lower is better)
Translates to: LTENNGSSARQMLNLTVCDIVAC*WTDGSV
Trigger: AACAGAACCATCAGTCCATCAACAAGCAACAATATC...ACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTCTGTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp GAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTATTTATACTGCACTACCCTCATaGGTGGGATATTGTTGCTTG +
Preference number: 4 (lower is better)
Translates to: ENNGSSARQMLNLTVCIYTALPS*VGYCCL
Trigger: CAAGCAACAATATCCCACTCATGAGGGTAGTGCAGT...ATAAATACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp GTTTCGTGTTTCAGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATAACTGCACTACCCTCATaGGTGGGATATTGTTGCTTG +
Preference number: 4 (lower is better)
Translates to: VSCFRELLLIQHSWSHKITALPS*VGYCCL
Trigger: CAAGCAACAATATCCCACTCATGAGGGTAGTGCAGT...TATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCTGAAACACGAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp CTGACAGAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTCTTCCTGTGTCATTCTaGAAGAGGGTAATACATTTG +
Preference number: 4 (lower is better)
Translates to: LTENNGSSARQMLNLTVCLPVSF*KRVIHL
Trigger: CAAATGTATTACCCTCTTTCAGAATGACACAGGAAG...ACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTCTGTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp AGACACCCTACATTCTACAATAAACTAAGTCATCCCCAAGAAGTCTTTCTTCATGTGATTTCGAAACAATaGGGATTGGCCCCATTAGGA +
Preference number: 4 (lower is better)
Translates to: RHPTFYNKLSHPQEVFLHVISKQ*GLAPLG
Trigger: TCCTAATGGGGCCAATCCTCATTGTTTCGAAATCAC...ATGAAGAAAGACTTCTTGGGGATGACTTAGTTTATTGTAGAATGTAGGGTGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546371.1
CDS-3UTR TCA 90 bp ACACACCAAACAGAACTACTTCACAGATACATTCTGTCTCTTACCAAAATGAAGAACACTGTTATTTGGTaGTGGGCTGGAAGGATTGAC +
Preference number: 4 (lower is better)
Translates to: THQTELLHRYILSLTKMKNTVIW*WAGRID
Trigger: GTCAATCCTTCCAGCCCATCACCAAATAACAGTGTT...CTTCATTTTGGTAAGAGACAGAATGTATCTGTGAAGTAGTTCTGTTTGGTGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR TCA 90 bp CTGACAGAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTTCATCAGGAAAAATCTaGTATACTGTGCTGATGTCC +
Preference number: 4 (lower is better)
Translates to: LTENNGSSARQMLNLTVCSSGKI*YTVLMS
Trigger: GGACATCAGCACAGTATATCAGATTTTTCCTGATGA...ACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTCTGTCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp CAAGATCATTTCCAGCATGTCTCCATGGAGTTTTTCCATAACAACAAACACTCTAAGACTTCTCTCCAATaGTCCGGGCAAAACCAAAAT +
Preference number: 4 (lower is better)
Translates to: QDHFQHVSMEFFHNNKHSKTSLQ*SGQNQN
Trigger: ATTTTGGTTTTGCCCGGATCATTGGAGAGAAGTCTT...AGAGTGTTTGTTGTTATGGAAAAACTCCATGGAGACATGCTGGAAATGATCTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp GAGTTTGTTTACAATGACAACACCAATGGGACACACCAAACAGAACTACTTCACATGAAAGCTGCATTCTaGATTTGGTCGTGTATGTCT +
Preference number: 4 (lower is better)
Translates to: EFVYNDNTNGTHQTELLHMKAAF*IWSCMS
Trigger: AGACATACACGACCAAATTCAGAATGCAGCTTTCAT...GTGAAGTAGTTCTGTTTGGTGTGTCCCATTGGTGTTGTCATTGTAAACAAACTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR TCA 90 bp CTGGTTCCAGAGACAAAATTTCAGATAAAGGAATTTCCTTGTAGTACCTGCTTCAGATCAATGGCTTCATaGGATATTTCCTTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: LVPETKFQIKEFPCSTCFRSMAS*DISFQG
Trigger: TCCCTGGAAGGAAATATCTCATGAAGCCATTGATCT...GAAGCAGGTACTACAAGGAAATTCCTTTATCTGAAATTTTGTCTCTGGAACCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp GACAACACCAATGGGACACACCAAACAGAACTACTTCACAGATACATTCTGTCTTGTCTCTTACCAAAATaGAGCTCCAGTAAGAAAAAC +
Preference number: 4 (lower is better)
Translates to: DNTNGTHQTELLHRYILSCLLPK*SSSKKN
Trigger: GTTTTTCTTACTGGAGCTTCATTTTGGTAAGAGACA...AGACAGAATGTATCTGTGAAGTAGTTCTGTTTGGTGTGTCCCATTGGTGTTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR TCA 90 bp CTGACAGAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTAGAGTTTGTTTACAATaGCAACACCAATGGGACACA +
Preference number: 4 (lower is better)
Translates to: LTENNGSSARQMLNLTVCRVCLQ*QHQWDT
Trigger: TGTGTCCCATTGGTGTTGTCATTGTAAACAAACTCT...ACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTCTGTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR TCA 90 bp ACACACCAAACAGAACTACTTCACAGATACATTCTGTCTCTTACCAAAATGAAGAGGTTGCTGAGCAGCTaGTTTTCCATAGTACAACAG +
Preference number: 4 (lower is better)
Translates to: THQTELLHRYILSLTKMKRLLSS*FSIVQQ
Trigger: CTGTTGTACTATGGAAAATCAGCTGCTCAGCAACCT...CTTCATTTTGGTAAGAGACAGAATGTATCTGTGAAGTAGTTCTGTTTGGTGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331968.11
ENST00000616995.4
CDS-3UTR TCA 90 bp GGAGTTGTTCATAGAACACTGGAAATAATCGACTCTTCAAGAGTTTGTTTACAACATTCAGGGAACTTTTaGTCGACAATGGAGCAAGCC +
Preference number: 4 (lower is better)
Translates to: GVVHRTLEIIDSSRVCLQHSGNF*STMEQA
Trigger: GGCTTGCTCCATTGTCGATCAAAAGTTCCCTGAATG...TTGTAAACAAACTCTTGAAGAGTCGATTATTTCCAGTGTTCTATGAACAACTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616995.4
CDS-3UTR GCA 90 bp GAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTATTTATTCTGATGGTGATTTTTaGAGAAGGGGCTCATCAGGG +
Preference number: 4 (lower is better)
Translates to: ENNGSSARQMLNLTVCIYSDGDF*RRGSSG
Trigger: CCCTGATGAGCCCCTTCTGCAAAAATCACCATCAGA...ATAAATACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR GCA 90 bp CATCTGACAGAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGCATCTTGGACCATTaGTTCTTCCATATCATCCAT +
Preference number: 4 (lower is better)
Translates to: HLTENNGSSARQMLNLTVCILDH*FFHIIH
Trigger: ATGGATGATATGGAAGAAGCAATGGTCCAAGATGCA...TACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTCTGTCAGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR GCA 90 bp GTTTCGTGTTTCAGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATATGCCATTGCCATCTCTaGATCTTGGACCATTGCTTC +
Preference number: 4 (lower is better)
Translates to: VSCFRELLLIQHSWSHKICHCHL*ILDHCF
Trigger: GAAGCAATGGTCCAAGATGCAGAGATGGCAATGGCA...TATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCTGAAACACGAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR GCA 90 bp GAGTTTGTTTACAATGACAACACCAATGGGACACACCAAACAGAACTACTTCACTTTCCTTGTAGTACCTaGTTCCTGTGTCATTCTGAA +
Preference number: 4 (lower is better)
Translates to: EFVYNDNTNGTHQTELLHFPCST*FLCHSE
Trigger: TTCAGAATGACACAGGAAGCAGGTACTACAAGGAAA...GTGAAGTAGTTCTGTTTGGTGTGTCCCATTGGTGTTGTCATTGTAAACAAACTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR GCA 90 bp ACACACCAAACAGAACTACTTCACAGATACATTCTGTCTCTTACCAAAATGAAGACAGAGATATCTCTGTaGAAGTTGGTTCCTGTACCC +
Preference number: 4 (lower is better)
Translates to: THQTELLHRYILSLTKMKTEISL*KLVPVP
Trigger: GGGTACAGGAACCAACTTGCACAGAGATATCTCTGT...CTTCATTTTGGTAAGAGACAGAATGTATCTGTGAAGTAGTTCTGTTTGGTGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR GCA 90 bp ATTTTCTCCCACATAATACACTACATTTGCCGTAGTGATTTCGAAACAATGAGGACAGAGATATCTCTGTaGAAGTTGGTTCCTGTACCC +
Preference number: 4 (lower is better)
Translates to: IFSHIIHYICRSDFETMRTEISL*KLVPVP
Trigger: GGGTACAGGAACCAACTTGCACAGAGATATCTCTGT...CCTCATTGTTTCGAAATCACTACGGCAAATGTAGTGTATTATGTGGGAGAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR GCA 90 bp GGAGTTGTTCATAGAACACTGGAAATAATCGACTCTTCAAGAGTTTGTTTACAATGTGCTCTGGCAACCTaGCCTTTTCACTTGACAAGA +
Preference number: 4 (lower is better)
Translates to: GVVHRTLEIIDSSRVCLQCALAT*PFHLTR
Trigger: TCTTGTCAAGTGAAAAGGGCAGGTTGCCAGAGCACA...TTGTAAACAAACTCTTGAAGAGTCGATTATTTCCAGTGTTCTATGAACAACTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR GCA 90 bp AGGCTTAAGAGCACTAGGTCTTGCACAGCTAGGTGCATTGTCTTGAGTTTAAATTCTTGCACAGCTAGGTaGATTGTCTTGAGTTTAAAT +
Preference number: 4 (lower is better)
Translates to: RLKSTRSCTARCIVLSLNSCTAR*IVLSLN
Trigger: ATTTAAACTCAAGACAATGCACCTAGCTGTGCAAGA...ATTTAAACTCAAGACAATGCACCTAGCTGTGCAAGACCTAGTGCTCTTAAGCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR GCA 90 bp TCGTGTTTCAGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATACAAAAGAGCACTAGGTCTTaGACAGCTAGGTGCATTGTC +
Preference number: 4 (lower is better)
Translates to: SCFRELLLIQHSWSHKIQKSTRS*TARCIV
Trigger: GACAATGCACCTAGCTGTGCAAGACCTAGTGCTCTT...TTGTATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCTGAAACACGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR CCA 90 bp TCGTGTTTCAGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATACAAATAAGATCGCCTTCCTaGATATCACTGGCCGCTTTC +
Preference number: 4 (lower is better)
Translates to: SCFRELLLIQHSWSHKIQIRSPS*ISLAAF
Trigger: GAAAGCGGCCAGTGATATCCAGGAAGGCGATCTTAT...TTGTATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCTGAAACACGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CCA 90 bp GTTTCGTGTTTCAGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATAATAAGATCGCCTTCCTaGATATCACTGGCCGCTTTC +
Preference number: 4 (lower is better)
Translates to: VSCFRELLLIQHSWSHKIIRSPS*ISLAAF
Trigger: GAAAGCGGCCAGTGATATCCAGGAAGGCGATCTTAT...TATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCTGAAACACGAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CCA 90 bp GAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTATTTATATAAGATCGCCTTCCTaGATATCACTGGCCGCTTTC +
Preference number: 4 (lower is better)
Translates to: ENNGSSARQMLNLTVCIYIRSPS*ISLAAF
Trigger: GAAAGCGGCCAGTGATATCCAGGAAGGCGATCTTAT...ATAAATACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CCA 90 bp GTTTCGTGTTTCAGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATAGAAAGTCTTCAAAGGTaGCGGAAGCTGACAAGACCA +
Preference number: 4 (lower is better)
Translates to: VSCFRELLLIQHSWSHKIESLQR*RKLTRP
Trigger: TGGTCTTGTCAGCTTCCGCCACCTTTGAAGACTTTC...TATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCTGAAACACGAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651616.1
CDS-3UTR CCA 90 bp TCGTGTTTCAGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATACAAGAAAGTCTTCAAAGGTaGCGGAAGCTGACAAGACCA +
Preference number: 4 (lower is better)
Translates to: SCFRELLLIQHSWSHKIQESLQR*RKLTRP
Trigger: TGGTCTTGTCAGCTTCCGCCACCTTTGAAGACTTTC...TTGTATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCTGAAACACGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651616.1
CDS-3UTR CCA 90 bp TGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTATTTATTAGTTCCAGGTGCACAACGTTTATaGCAGTTGAATCTGCAATCT +
Preference number: 4 (lower is better)
Translates to: WQFCKANVKPDRMYLLVPGAQRL*QLNLQS
Trigger: AGATTGCAGATTCAACTGCCATAAACGTTGTGCACC...TGGAACTAATAAATACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CCA 90 bp GGAGTTGTTCATAGAACACTGGAAATAATCGACTCTTCAAGAGTTTGTTTACAACTTCGTTATGTGCTCTaGCAACCTGCCCTTTTCACT +
Preference number: 4 (lower is better)
Translates to: GVVHRTLEIIDSSRVCLQLRYVL*QPALFT
Trigger: AGTGAAAAGGGCAGGTTGCCAGAGCACATAACGAAG...TTGTAAACAAACTCTTGAAGAGTCGATTATTTCCAGTGTTCTATGAACAACTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR CCA 90 bp TCGTGTTTCAGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATACAACTTCGTTATGTGCTCTaGCAACCTGCCCTTTTCACT +
Preference number: 4 (lower is better)
Translates to: SCFRELLLIQHSWSHKIQLRYVL*QPALFT
Trigger: AGTGAAAAGGGCAGGTTGCCAGAGCACATAACGAAG...TTGTATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCTGAAACACGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CCA 90 bp ACACACCAAACAGAACTACTTCACAGATACATTCTGTCTCTTACCAAAATGAAGTTCCTTCCAGGGATTTaGTGGATACATGAAAGCTGC +
Preference number: 4 (lower is better)
Translates to: THQTELLHRYILSLTKMKFLPGI*WIHESC
Trigger: GCAGCTTTCATGTATCCACCAAATCCCTGGAAGGAA...CTTCATTTTGGTAAGAGACAGAATGTATCTGTGAAGTAGTTCTGTTTGGTGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR CCA 90 bp TCGTGTTTCAGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATACAATCAGGAGTGTCACTGTaGCTAGCACTTGGATTGATC +
Preference number: 4 (lower is better)
Translates to: SCFRELLLIQHSWSHKIQSGVSL*LALGLI
Trigger: GATCAATCCAAGTGCTAGCCACAGTGACACTCCTGA...TTGTATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCTGAAACACGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CCA 90 bp GTTTCGTGTTTCAGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATATCAGGAGTGTCACTGTaGCTAGCACTTGGATTGATC +
Preference number: 4 (lower is better)
Translates to: VSCFRELLLIQHSWSHKISGVSL*LALGLI
Trigger: GATCAATCCAAGTGCTAGCCACAGTGACACTCCTGA...TATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCTGAAACACGAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp CTGACAGAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTAAAATCTTGTCAAGGTaGATTGGTCGTCCAATGTAT +
Preference number: 4 (lower is better)
Translates to: LTENNGSSARQMLNLTVCKILSR*IGRPMY
Trigger: ATACATTGGACGACCAATTCACCTTGACAAGATTTT...ACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTCTGTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp TGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTATTTATTAGTTCCAAACGTTTATGGCAGTTaGATCTGCAATCTTTGCACT +
Preference number: 4 (lower is better)
Translates to: WQFCKANVKPDRMYLLVPNVYGS*ICNLCT
Trigger: AGTGCAAAGATTGCAGATTCAACTGCCATAAACGTT...TGGAACTAATAAATACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp TGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTATTTATTAGTTCCAGATATTGTTGCTTGTTaGTGGACTGATGGTTCTGTT +
Preference number: 4 (lower is better)
Translates to: WQFCKANVKPDRMYLLVPDIVAC*WTDGSV
Trigger: AACAGAACCATCAGTCCATCAACAAGCAACAATATC...TGGAACTAATAAATACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp GGAGTTGTTCATAGAACACTGGAAATAATCGACTCTTCAAGAGTTTGTTTACAAGTGATTTCGAAACAATaGGGATTGGCCCCATTAGGA +
Preference number: 4 (lower is better)
Translates to: GVVHRTLEIIDSSRVCLQVISKQ*GLAPLG
Trigger: TCCTAATGGGGCCAATCCTCATTGTTTCGAAATCAC...TTGTAAACAAACTCTTGAAGAGTCGATTATTTCCAGTGTTCTATGAACAACTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR TCA 90 bp GAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTATTTATGTGATTTCGAAACAATaGGGATTGGCCCCATTAGGA +
Preference number: 4 (lower is better)
Translates to: ENNGSSARQMLNLTVCIYVISKQ*GLAPLG
Trigger: TCCTAATGGGGCCAATCCTCATTGTTTCGAAATCAC...ATAAATACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp TCGTGTTTCAGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATACAAGTGATTTCGAAACAATaGGGATTGGCCCCATTAGGA +
Preference number: 4 (lower is better)
Translates to: SCFRELLLIQHSWSHKIQVISKQ*GLAPLG
Trigger: TCCTAATGGGGCCAATCCTCATTGTTTCGAAATCAC...TTGTATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCTGAAACACGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp GGAGTTGTTCATAGAACACTGGAAATAATCGACTCTTCAAGAGTTTGTTTACAAAACACTGTTATTTGGTaGTGGGCTGGAAGGATTGAC +
Preference number: 4 (lower is better)
Translates to: GVVHRTLEIIDSSRVCLQNTVIW*WAGRID
Trigger: GTCAATCCTTCCAGCCCATCACCAAATAACAGTGTT...TTGTAAACAAACTCTTGAAGAGTCGATTATTTCCAGTGTTCTATGAACAACTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR TCA 90 bp CTTTTATTTAGACACCCTACATTCTACAATAAACTAAGTCATCCCCAAGAAGTCAACACTGTTATTTGGTaGTGGGCTGGAAGGATTGAC +
Preference number: 4 (lower is better)
Translates to: LLFRHPTFYNKLSHPQEVNTVIW*WAGRID
Trigger: GTCAATCCTTCCAGCCCATCACCAAATAACAGTGTT...GACTTCTTGGGGATGACTTAGTTTATTGTAGAATGTAGGGTGTCTAAATAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546371.1
CDS-3UTR TCA 90 bp CAAGATCATTTCCAGCATGTCTCCATGGAGTTTTTCCATAACAACAAACACTCTATGAAAGCTGCATTCTaGATTTGGTCGTGTATGTCT +
Preference number: 4 (lower is better)
Translates to: QDHFQHVSMEFFHNNKHSMKAAF*IWSCMS
Trigger: AGACATACACGACCAAATTCAGAATGCAGCTTTCAT...AGAGTGTTTGTTGTTATGGAAAAACTCCATGGAGACATGCTGGAAATGATCTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp ACACCAAACAGAACTACTTCACAGATACATTCTGTCTCTTACCAAAATGAAGCTAGATCAATGGCTTCATaGGATATTTCCTTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: TPNRTTSQIHSVSYQNEARSMAS*DISFQG
Trigger: TCCCTGGAAGGAAATATCTCATGAAGCCATTGATCT...AGCTTCATTTTGGTAAGAGACAGAATGTATCTGTGAAGTAGTTCTGTTTGGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR TCA 90 bp CATCTGACAGAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTCTCTTACCAAAATaGAGCTCCAGTAAGAAAAAC +
Preference number: 4 (lower is better)
Translates to: HLTENNGSSARQMLNLTVCLLPK*SSSKKN
Trigger: GTTTTTCTTACTGGAGCTTCATTTTGGTAAGAGACA...TACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTCTGTCAGATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR TCA 90 bp CTGGTTCCAGAGACAAAATTTCAGATAAAGGAATTTCCTTGTAGTACCTGCTTCAGAGTTTGTTTACAATaGCAACACCAATGGGACACA +
Preference number: 4 (lower is better)
Translates to: LVPETKFQIKEFPCSTCFRVCLQ*QHQWDT
Trigger: TGTGTCCCATTGGTGTTGTCATTGTAAACAAACTCT...GAAGCAGGTACTACAAGGAAATTCCTTTATCTGAAATTTTGTCTCTGGAACCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651571.1
CDS-3UTR GCA 90 bp TGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTATTTATTAGTTCCATGGATGACAAATGTGTaGGGCACTTTAACTTTAGAC +
Preference number: 4 (lower is better)
Translates to: WQFCKANVKPDRMYLLVPWMTNV*GTLTLD
Trigger: GTCTAAAGTTAAAGTGCCGCACACATTTGTCATCCA...TGGAACTAATAAATACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR GCA 90 bp CTGGTTCCAGAGACAAAATTTCAGATAAAGGAATTTCCTTGTAGTACCTGCTTCTGCATCTTGGACCATTaGTTCTTCCATATCATCCAT +
Preference number: 4 (lower is better)
Translates to: LVPETKFQIKEFPCSTCFCILDH*FFHIIH
Trigger: ATGGATGATATGGAAGAAGCAATGGTCCAAGATGCA...GAAGCAGGTACTACAAGGAAATTCCTTTATCTGAAATTTTGTCTCTGGAACCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR GCA 90 bp GTTTCGTGTTTCAGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATAACAGAGATATCTCTGTaGAAGTTGGTTCCTGTACCC +
Preference number: 4 (lower is better)
Translates to: VSCFRELLLIQHSWSHKITEISL*KLVPVP
Trigger: GGGTACAGGAACCAACTTGCACAGAGATATCTCTGT...TATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCTGAAACACGAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR GCA 90 bp ACACACCAAACAGAACTACTTCACAGATACATTCTGTCTCTTACCAAAATGAAGAAAAACTTCGTTATGTaGTCTGGCAACCTGCCCTTT +
Preference number: 4 (lower is better)
Translates to: THQTELLHRYILSLTKMKKNFVM*SGNLPF
Trigger: AAAGGGCAGGTTGCCAGAGCACATAACGAAGTTTTT...CTTCATTTTGGTAAGAGACAGAATGTATCTGTGAAGTAGTTCTGTTTGGTGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR CCA 90 bp TCGTGTTTCAGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATACAAGCCATCTCTGCATCTTaGACCATTGCTTCTTCCATA +
Preference number: 4 (lower is better)
Translates to: SCFRELLLIQHSWSHKIQAISAS*TIASSI
Trigger: TATGGAAGAAGCAATGGTCCAAGATGCAGAGATGGC...TTGTATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCTGAAACACGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CCA 90 bp ATTTTCTCCCACATAATACACTACATTTGCCGTAGTGATTTCGAAACAATGAGGCTTCCAGGGATTTGGTaGATACATGAAAGCTGCATT +
Preference number: 4 (lower is better)
Translates to: IFSHIIHYICRSDFETMRLPGIW*IHESCI
Trigger: AATGCAGCTTTCATGTATCCACCAAATCCCTGGAAG...CCTCATTGTTTCGAAATCACTACGGCAAATGTAGTGTATTATGTGGGAGAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CCA 90 bp GAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTATTTATTTCCTTCCAGGGATTTaGTGGATACATGAAAGCTGC +
Preference number: 4 (lower is better)
Translates to: ENNGSSARQMLNLTVCIYFLPGI*WIHESC
Trigger: GCAGCTTTCATGTATCCACCAAATCCCTGGAAGGAA...ATAAATACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CCA 90 bp CATCTGACAGAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATCTGTTGATTTGTCTTaGCAACTCAGATACATCAAC +
Preference number: 4 (lower is better)
Translates to: HLTENNGSSARQMLNLTVSVDLS*QLRYIN
Trigger: GTTGATGTATCTGAGTTGCCAAGACAAATCAACAGA...TACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTCTGTCAGATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
3UTR CAA 72 bp CAGTTGGTCACACAAAATACAAATGCTTCTGTTGATTaGTCTTGGCAACTCAGATACATCAACAGTGCTAAC +
Preference number: 4 (lower is better)
Translates to: QLVTQNTNASVD*SWQLRYINSAN
Trigger: GTTAGCACTGTTGATGTATCTGAGTTGCCAAGACAAATCAACAGAAGCATTTGTATTTTGTGTGACCAACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp TGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTATTTATTAGTTCCAAAAATCTTGTCAAGGTaGATTGGTCGTCCAATGTAT +
Preference number: 4 (lower is better)
Translates to: WQFCKANVKPDRMYLLVPKILSR*IGRPMY
Trigger: ATACATTGGACGACCAATTCACCTTGACAAGATTTT...TGGAACTAATAAATACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp AGACACCCTACATTCTACAATAAACTAAGTCATCCCCAAGAAGTCTTTCTTCATCTTCCTGTGTCATTCTaGAAGAGGGTAATACATTTG +
Preference number: 4 (lower is better)
Translates to: RHPTFYNKLSHPQEVFLHLPVSF*KRVIHL
Trigger: CAAATGTATTACCCTCTTTCAGAATGACACAGGAAG...ATGAAGAAAGACTTCTTGGGGATGACTTAGTTTATTGTAGAATGTAGGGTGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546371.1
CDS-3UTR TCA 90 bp GGAGTTGTTCATAGAACACTGGAAATAATCGACTCTTCAAGAGTTTGTTTACAAAAGACTTCTCTCCAATaGTCCGGGCAAAACCAAAAT +
Preference number: 4 (lower is better)
Translates to: GVVHRTLEIIDSSRVCLQKTSLQ*SGQNQN
Trigger: ATTTTGGTTTTGCCCGGATCATTGGAGAGAAGTCTT...TTGTAAACAAACTCTTGAAGAGTCGATTATTTCCAGTGTTCTATGAACAACTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR TCA 90 bp TGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTATTTATTAGTTCCAAGCTTTGTTCTCATCTaGCAGAAAATAATGGCAGTT +
Preference number: 4 (lower is better)
Translates to: WQFCKANVKPDRMYLLVPSFVLI*QKIMAV
Trigger: AACTGCCATTATTTTCTGTCAGATGAGAACAAAGCT...TGGAACTAATAAATACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp ACACCAAACAGAACTACTTCACAGATACATTCTGTCTCTTACCAAAATGAAGCTTACAAATGCTTCTGTTaGTTTGTCTTGGCAACTCAG +
Preference number: 4 (lower is better)
Translates to: TPNRTTSQIHSVSYQNEAYKCFC*FVLATQ
Trigger: CTGAGTTGCCAAGACAAATCAACAGAAGCATTTGTA...AGCTTCATTTTGGTAAGAGACAGAATGTATCTGTGAAGTAGTTCTGTTTGGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR GCA 90 bp ACACCAAACAGAACTACTTCACAGATACATTCTGTCTCTTACCAAAATGAAGCTTGGATGACAAATGTGTaGGGCACTTTAACTTTAGAC +
Preference number: 4 (lower is better)
Translates to: TPNRTTSQIHSVSYQNEAWMTNV*GTLTLD
Trigger: GTCTAAAGTTAAAGTGCCGCACACATTTGTCATCCA...AGCTTCATTTTGGTAAGAGACAGAATGTATCTGTGAAGTAGTTCTGTTTGGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR GCA 90 bp ACACACCAAACAGAACTACTTCACAGATACATTCTGTCTCTTACCAAAATGAAGTTTCCTTGTAGTACCTaGTTCCTGTGTCATTCTGAA +
Preference number: 4 (lower is better)
Translates to: THQTELLHRYILSLTKMKFPCST*FLCHSE
Trigger: TTCAGAATGACACAGGAAGCAGGTACTACAAGGAAA...CTTCATTTTGGTAAGAGACAGAATGTATCTGTGAAGTAGTTCTGTTTGGTGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR GCA 90 bp GAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTATTTATAAAAACTTCGTTATGTaGTCTGGCAACCTGCCCTTT +
Preference number: 4 (lower is better)
Translates to: ENNGSSARQMLNLTVCIYKNFVM*SGNLPF
Trigger: AAAGGGCAGGTTGCCAGAGCACATAACGAAGTTTTT...ATAAATACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR GCA 90 bp AGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATACAAATGCTTCTGAAAAACTTCGTTATGTaGTCTGGCAACCTGCCCTTT +
Preference number: 4 (lower is better)
Translates to: RELLLIQHSWSHKIQMLLKNFVM*SGNLPF
Trigger: AAAGGGCAGGTTGCCAGAGCACATAACGAAGTTTTT...CAGAAGCATTTGTATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR GCA 90 bp GTTTCGTGTTTCAGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATATCTGATGGTGATTTTTaGTCAAAGCCAGGACTCACA +
Preference number: 4 (lower is better)
Translates to: VSCFRELLLIQHSWSHKISDGDF*SKPGLT
Trigger: TGTGAGTCCTGGCTTTGAGCAAAAATCACCATCAGA...TATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCTGAAACACGAAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000415220.6
ENST00000651616.1
CDS-3UTR CCA 90 bp AGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATACAAATGCTTCTGGGTGCACAACGTTTATaGCAGTTGAATCTGCAATCT +
Preference number: 4 (lower is better)
Translates to: RELLLIQHSWSHKIQMLLGAQRL*QLNLQS
Trigger: AGATTGCAGATTCAACTGCCATAAACGTTGTGCACC...CAGAAGCATTTGTATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CCA 90 bp GTTTCGTGTTTCAGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATACTTCCAGGGATTTGGTaGATACATGAAAGCTGCATT +
Preference number: 4 (lower is better)
Translates to: VSCFRELLLIQHSWSHKILPGIW*IHESCI
Trigger: AATGCAGCTTTCATGTATCCACCAAATCCCTGGAAG...TATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCTGAAACACGAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CCA 90 bp TCGTGTTTCAGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATACAATACACAATGAAGTTGTaGCAATCCCAGGATCTCACA +
Preference number: 4 (lower is better)
Translates to: SCFRELLLIQHSWSHKIQYTMKL*QSQDLT
Trigger: TGTGAGATCCTGGGATTGCCACAACTTCATTGTGTA...TTGTATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCTGAAACACGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651571.1
CDS-3UTR TCA 90 bp GAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTATTTATCGTCCAATGTATGATTaGGAATTTGACCTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: ENNGSSARQMLNLTVCIYRPMYD*EFDLFS
Trigger: AGAGAAGAGGTCAAATTCTCAATCATACATTGGACG...ATAAATACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp GTTTCGTGTTTCAGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATACGTCCAATGTATGATTaGGAATTTGACCTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: VSCFRELLLIQHSWSHKIRPMYD*EFDLFS
Trigger: AGAGAAGAGGTCAAATTCTCAATCATACATTGGACG...TATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCTGAAACACGAAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp ATTTTCTCCCACATAATACACTACATTTGCCGTAGTGATTTCGAAACAATGAGGAAAATCTTGTCAAGGTaGATTGGTCGTCCAATGTAT +
Preference number: 4 (lower is better)
Translates to: IFSHIIHYICRSDFETMRKILSR*IGRPMY
Trigger: ATACATTGGACGACCAATTCACCTTGACAAGATTTT...CCTCATTGTTTCGAAATCACTACGGCAAATGTAGTGTATTATGTGGGAGAAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp AGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATACAAATGCTTCTGAACGTTTATGGCAGTTaGATCTGCAATCTTTGCACT +
Preference number: 4 (lower is better)
Translates to: RELLLIQHSWSHKIQMLLNVYGS*ICNLCT
Trigger: AGTGCAAAGATTGCAGATTCAACTGCCATAAACGTT...CAGAAGCATTTGTATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp TCGTGTTTCAGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATACAAAACGTTTATGGCAGTTaGATCTGCAATCTTTGCACT +
Preference number: 4 (lower is better)
Translates to: SCFRELLLIQHSWSHKIQNVYGS*ICNLCT
Trigger: AGTGCAAAGATTGCAGATTCAACTGCCATAAACGTT...TTGTATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCTGAAACACGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp TCGTGTTTCAGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATACAACTTCCTGTGTCATTCTaGAAGAGGGTAATACATTTG +
Preference number: 4 (lower is better)
Translates to: SCFRELLLIQHSWSHKIQLPVSF*KRVIHL
Trigger: CAAATGTATTACCCTCTTTCAGAATGACACAGGAAG...TTGTATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCTGAAACACGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp ACACCAAACAGAACTACTTCACAGATACATTCTGTCTCTTACCAAAATGAAGCTTCTGATATACTGTGCTaGTGTCCACATTTTCTTGAA +
Preference number: 4 (lower is better)
Translates to: TPNRTTSQIHSVSYQNEASDILC*CPHFLE
Trigger: TTCAAGAAAATGTGGACATCAGCACAGTATATCAGA...AGCTTCATTTTGGTAAGAGACAGAATGTATCTGTGAAGTAGTTCTGTTTGGTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR TCA 90 bp ACACACCAAACAGAACTACTTCACAGATACATTCTGTCTCTTACCAAAATGAAGTCTGATATACTGTGCTaGTGTCCACATTTTCTTGAA +
Preference number: 4 (lower is better)
Translates to: THQTELLHRYILSLTKMKSDILC*CPHFLE
Trigger: TTCAAGAAAATGTGGACATCAGCACAGTATATCAGA...CTTCATTTTGGTAAGAGACAGAATGTATCTGTGAAGTAGTTCTGTTTGGTGTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR TCA 90 bp ATTTTCTCCCACATAATACACTACATTTGCCGTAGTGATTTCGAAACAATGAGGTCTGATATACTGTGCTaGTGTCCACATTTTCTTGAA +
Preference number: 4 (lower is better)
Translates to: IFSHIIHYICRSDFETMRSDILC*CPHFLE
Trigger: TTCAAGAAAATGTGGACATCAGCACAGTATATCAGA...CCTCATTGTTTCGAAATCACTACGGCAAATGTAGTGTATTATGTGGGAGAAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp GAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTATTTATTCATCAGGAAAAATCTaGTATACTGTGCTGATGTCC +
Preference number: 4 (lower is better)
Translates to: ENNGSSARQMLNLTVCIYSSGKI*YTVLMS
Trigger: GGACATCAGCACAGTATATCAGATTTTTCCTGATGA...ATAAATACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp GAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTATTTATATGAAAGCTGCATTCTaGATTTGGTCGTGTATGTCT +
Preference number: 4 (lower is better)
Translates to: ENNGSSARQMLNLTVCIYMKAAF*IWSCMS
Trigger: AGACATACACGACCAAATTCAGAATGCAGCTTTCAT...ATAAATACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp ACACACCAAACAGAACTACTTCACAGATACATTCTGTCTCTTACCAAAATGAAGAGCTTTGTTCTCATCTaGCAGAAAATAATGGCAGTT +
Preference number: 4 (lower is better)
Translates to: THQTELLHRYILSLTKMKSFVLI*QKIMAV
Trigger: AACTGCCATTATTTTCTGTCAGATGAGAACAAAGCT...CTTCATTTTGGTAAGAGACAGAATGTATCTGTGAAGTAGTTCTGTTTGGTGTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR TCA 90 bp GTTTCGTGTTTCAGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATATACAAATGCTTCTGTTaGTTTGTCTTGGCAACTCAG +
Preference number: 4 (lower is better)
Translates to: VSCFRELLLIQHSWSHKIYKCFC*FVLATQ
Trigger: CTGAGTTGCCAAGACAAATCAACAGAAGCATTTGTA...TATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCTGAAACACGAAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp TCGTGTTTCAGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATACAATACAAATGCTTCTGTTaGTTTGTCTTGGCAACTCAG +
Preference number: 4 (lower is better)
Translates to: SCFRELLLIQHSWSHKIQYKCFC*FVLATQ
Trigger: CTGAGTTGCCAAGACAAATCAACAGAAGCATTTGTA...TTGTATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCTGAAACACGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR GCA 90 bp GTTTCGTGTTTCAGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATATGGATGACAAATGTGTaGGGCACTTTAACTTTAGAC +
Preference number: 4 (lower is better)
Translates to: VSCFRELLLIQHSWSHKIWMTNV*GTLTLD
Trigger: GTCTAAAGTTAAAGTGCCGCACACATTTGTCATCCA...TATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCTGAAACACGAAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR GCA 90 bp GGAGTTGTTCATAGAACACTGGAAATAATCGACTCTTCAAGAGTTTGTTTACAATGGATGACAAATGTGTaGGGCACTTTAACTTTAGAC +
Preference number: 4 (lower is better)
Translates to: GVVHRTLEIIDSSRVCLQWMTNV*GTLTLD
Trigger: GTCTAAAGTTAAAGTGCCGCACACATTTGTCATCCA...TTGTAAACAAACTCTTGAAGAGTCGATTATTTCCAGTGTTCTATGAACAACTCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR GCA 90 bp TCGTGTTTCAGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATACAATGCATCTTGGACCATTaGTTCTTCCATATCATCCAT +
Preference number: 4 (lower is better)
Translates to: SCFRELLLIQHSWSHKIQCILDH*FFHIIH
Trigger: ATGGATGATATGGAAGAAGCAATGGTCCAAGATGCA...TTGTATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCTGAAACACGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR GCA 90 bp AGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATACAAATGCTTCTGTTTCCTTGTAGTACCTaGTTCCTGTGTCATTCTGAA +
Preference number: 4 (lower is better)
Translates to: RELLLIQHSWSHKIQMLLFPCST*FLCHSE
Trigger: TTCAGAATGACACAGGAAGCAGGTACTACAAGGAAA...CAGAAGCATTTGTATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR GCA 90 bp CTTTTATTTAGACACCCTACATTCTACAATAAACTAAGTCATCCCCAAGAAGTCTTTCCTTGTAGTACCTaGTTCCTGTGTCATTCTGAA +
Preference number: 4 (lower is better)
Translates to: LLFRHPTFYNKLSHPQEVFPCST*FLCHSE
Trigger: TTCAGAATGACACAGGAAGCAGGTACTACAAGGAAA...GACTTCTTGGGGATGACTTAGTTTATTGTAGAATGTAGGGTGTCTAAATAAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546371.1
CDS-3UTR GCA 90 bp TCGTGTTTCAGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATACAATTTCCTTGTAGTACCTaGTTCCTGTGTCATTCTGAA +
Preference number: 4 (lower is better)
Translates to: SCFRELLLIQHSWSHKIQFPCST*FLCHSE
Trigger: TTCAGAATGACACAGGAAGCAGGTACTACAAGGAAA...TTGTATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCTGAAACACGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CCA 90 bp AGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATACAAATGCTTCTGTCCAGCATGTCTCCATaGAGTTTTTCCATAACAACA +
Preference number: 4 (lower is better)
Translates to: RELLLIQHSWSHKIQMLLSSMSP*SFSITT
Trigger: TGTTGTTATGGAAAAACTCCATGGAGACATGCTGGA...CAGAAGCATTTGTATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CCA 90 bp GTTTCGTGTTTCAGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATATCCAGCATGTCTCCATaGAGTTTTTCCATAACAACA +
Preference number: 4 (lower is better)
Translates to: VSCFRELLLIQHSWSHKISSMSP*SFSITT
Trigger: TGTTGTTATGGAAAAACTCCATGGAGACATGCTGGA...TATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCTGAAACACGAAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CCA 90 bp GGAGTTGTTCATAGAACACTGGAAATAATCGACTCTTCAAGAGTTTGTTTACAATCCAGCATGTCTCCATaGAGTTTTTCCATAACAACA +
Preference number: 4 (lower is better)
Translates to: GVVHRTLEIIDSSRVCLQSSMSP*SFSITT
Trigger: TGTTGTTATGGAAAAACTCCATGGAGACATGCTGGA...TTGTAAACAAACTCTTGAAGAGTCGATTATTTCCAGTGTTCTATGAACAACTCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR TCA 90 bp TCGTGTTTCAGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATACAAAAAATCTTGTCAAGGTaGATTGGTCGTCCAATGTAT +
Preference number: 4 (lower is better)
Translates to: SCFRELLLIQHSWSHKIQKILSR*IGRPMY
Trigger: ATACATTGGACGACCAATTCACCTTGACAAGATTTT...TTGTATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCTGAAACACGA
36% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp GGAGTTGTTCATAGAACACTGGAAATAATCGACTCTTCAAGAGTTTGTTTACAAAAAATCTTGTCAAGGTaGATTGGTCGTCCAATGTAT +
Preference number: 4 (lower is better)
Translates to: GVVHRTLEIIDSSRVCLQKILSR*IGRPMY
Trigger: ATACATTGGACGACCAATTCACCTTGACAAGATTTT...TTGTAAACAAACTCTTGAAGAGTCGATTATTTCCAGTGTTCTATGAACAACTCC
36% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR TCA 90 bp GTTTCGTGTTTCAGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATATCTGATATACTGTGCTaGTGTCCACATTTTCTTGAA +
Preference number: 4 (lower is better)
Translates to: VSCFRELLLIQHSWSHKISDILC*CPHFLE
Trigger: TTCAAGAAAATGTGGACATCAGCACAGTATATCAGA...TATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCTGAAACACGAAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp TCGTGTTTCAGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATACAAGATTTGGTGGATACATaGAAGCTGCATTCTGAATTT +
Preference number: 4 (lower is better)
Translates to: SCFRELLLIQHSWSHKIQDLVDT*KLHSEF
Trigger: AAATTCAGAATGCAGCTTTCATGTATCCACCAAATC...TTGTATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCTGAAACACGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp GAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTATTTATGATTTGGTGGATACATaGAAGCTGCATTCTGAATTT +
Preference number: 4 (lower is better)
Translates to: ENNGSSARQMLNLTVCIYDLVDT*KLHSEF
Trigger: AAATTCAGAATGCAGCTTTCATGTATCCACCAAATC...ATAAATACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR TCA 90 bp GAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTATTTATAGCTTTGTTCTCATCTaGCAGAAAATAATGGCAGTT +
Preference number: 4 (lower is better)
Translates to: ENNGSSARQMLNLTVCIYSFVLI*QKIMAV
Trigger: AACTGCCATTATTTTCTGTCAGATGAGAACAAAGCT...ATAAATACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR GCA 90 bp GGAGTTGTTCATAGAACACTGGAAATAATCGACTCTTCAAGAGTTTGTTTACAATCTTGCACAGCTAGGTaGATTGTCTTGAGTTTAAAT +
Preference number: 4 (lower is better)
Translates to: GVVHRTLEIIDSSRVCLQSCTAR*IVLSLN
Trigger: ATTTAAACTCAAGACAATGCACCTAGCTGTGCAAGA...TTGTAAACAAACTCTTGAAGAGTCGATTATTTCCAGTGTTCTATGAACAACTCC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR GCA 90 bp TCGTGTTTCAGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATACAATCTTGCACAGCTAGGTaGATTGTCTTGAGTTTAAAT +
Preference number: 4 (lower is better)
Translates to: SCFRELLLIQHSWSHKIQSCTAR*IVLSLN
Trigger: ATTTAAACTCAAGACAATGCACCTAGCTGTGCAAGA...TTGTATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCTGAAACACGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS GCA 90 bp GCAGCACCGGCTCACGGCTCAGGCCGATCTGCAGATGGAACGAGATaGCCCCGACCGGGGCCGCGACAGGAGCCAAGAACGGCGCGGGCC +
Preference number: 5 (lower is better)
Translates to: AAPAHGSGRSADGTR*PRPGPRQEPRTARA
Trigger: GGCCCGCGCCGTTCTTGGCTCCTGTCGCGGCCCCGGTCGGGGGCATCTCGTTCCATCTGCAGATCGGCCTGAGCCGTGAGCCGGTGCTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
CDS GCA 90 bp GACGAGTCCTGCAGCAGCAGCACCGGCTCACGGCTCAGGCCGATCTaGAGATGGAACGAGATGCCCCCGACCGGGGCCGCGACAGGAGCC +
Preference number: 5 (lower is better)
Translates to: DESCSSSTGSRLRPI*RWNEMPPTGAATGA
Trigger: GGCTCCTGTCGCGGCCCCGGTCGGGGGCATCTCGTTCCATCTGCAGATCGGCCTGAGCCGTGAGCCGGTGCTGCTGCTGCAGGACTCGTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
CDS GCA 90 bp GCAGTGCTCCTGATGCCATCCAGGAATCCCCTTTACTGGTTCCGTTaGACTGTCTGGAAGGGCACCGGGACATGGGAGGGCCTATCCCCT +
Preference number: 5 (lower is better)
Translates to: AVLLMPSRNPLYWFR*TVWKGTGTWEGLSP
Trigger: AGGGGATAGGCCCTCCCATGTCCCGGTGCCCTTCCAGACAGTGCAACGGAACCAGTAAAGGGGATTCCTGGATGGCATCAGGAGCACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551644.5
CDS CCA 90 bp CTGATGCCATCCAGGAATCCCCTTTACTGGTTCCGTTGCACTGTCTaGAAGGGCACCGGGACATGGGAGGGCCTATCCCCTTCAGGGCTG +
Preference number: 5 (lower is better)
Translates to: LMPSRNPLYWFRCTV*KGTGTWEGLSPSGL
Trigger: CAGCCCTGAAGGGGATAGGCCCTCCCATGTCCCGGTGCCCTTCCAGACAGTGCAACGGAACCAGTAAAGGGGATTCCTGGATGGCATCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551644.5
CDS CCA 90 bp GATGTCTGTGCAGTGCTCCTGATGCCATCCAGGAATCCCCTTTACTaGTTCCGTTGCACTGTCTGGAAGGGCACCGGGACATGGGAGGGC +
Preference number: 5 (lower is better)
Translates to: DVCAVLLMPSRNPLY*FRCTVWKGTGTWEG
Trigger: GCCCTCCCATGTCCCGGTGCCCTTCCAGACAGTGCAACGGAACCAGTAAAGGGGATTCCTGGATGGCATCAGGAGCACTGCACAGACATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551644.5
CDS-3UTR CAA 90 bp TGTACCCACGGAGGAGCCCTTGGGAATGACGGGCATAAGGGCATGCTGGATGGCGTCTGGGTCTGGATCTaGCATCTCGCCACTGTCGTT +
Preference number: 5 (lower is better)
Translates to: CTHGGALGNDGHKGMLDGVWVWI*HLATVV
Trigger: AACGACAGTGGCGAGATGCAAGATCCAGACCCAGAC...GCCATCCAGCATGCCCTTATGCCCGTCATTCCCAAGGGCTCCTCCGTGGGTACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CAA 90 bp TGTTGGCGTCCTCGTGGTCTGGGTCTGGATCTTGCATCTCGCCACTGTCGTTCTGGACTGATGGTTCTGTaGGCGTCCTCGTGGTCTGGG +
Preference number: 5 (lower is better)
Translates to: CWRPRGLGLDLASRHCRSGLMVL*ASSWSG
Trigger: CCCAGACCACGAGGACGCCAACAGAACCATCAGTCC...AGAACGACAGTGGCGAGATGCAAGATCCAGACCCAGACCACGAGGACGCCAACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CAA 90 bp TGTTGGCGTCCTCGTGGTCTGGGTCTGGATCTTGCATCTCGCCACTGTCGTTCTGTCTGGGTCTGGATCTaGCATCTCGCCACTGTCGTT +
Preference number: 5 (lower is better)
Translates to: CWRPRGLGLDLASRHCRSVWVWI*HLATVV
Trigger: AACGACAGTGGCGAGATGCAAGATCCAGACCCAGAC...AGAACGACAGTGGCGAGATGCAAGATCCAGACCCAGACCACGAGGACGCCAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CAA 90 bp TGTTGGCGTCCTCGTGGTCTGGGTCTGGATCTTGCATCTCGCCACTGTCGTTCTTGGCTAGCACTTGGATaGATCAGGTGTGTGGGGTAC +
Preference number: 5 (lower is better)
Translates to: CWRPRGLGLDLASRHCRSWLALG*IRCVGY
Trigger: GTACCCCACACACCTGATCAATCCAAGTGCTAGCCA...AGAACGACAGTGGCGAGATGCAAGATCCAGACCCAGACCACGAGGACGCCAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CAA 90 bp TGTTGGCGTCCTCGTGGTCTGGGTCTGGATCTTGCATCTCGCCACTGTCGTTCTGATGGGCTGGAAGGATaGACCACATTTTCTCCCACA +
Preference number: 5 (lower is better)
Translates to: CWRPRGLGLDLASRHCRSDGLEG*TTFSPT
Trigger: TGTGGGAGAAAATGTGGTCAATCCTTCCAGCCCATC...AGAACGACAGTGGCGAGATGCAAGATCCAGACCCAGACCACGAGGACGCCAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CAA 90 bp TGTACCCACGGAGGAGCCCTTGGGAATGACGGGCATAAGGGCATGCTGGATGGCATCTACACAATGAAGTaGTGGCAATCCCAGGATCTC +
Preference number: 5 (lower is better)
Translates to: CTHGGALGNDGHKGMLDGIYTMK*WQSQDL
Trigger: GAGATCCTGGGATTGCCACAACTTCATTGTGTAGAT...GCCATCCAGCATGCCCTTATGCCCGTCATTCCCAAGGGCTCCTCCGTGGGTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651571.1
CDS-3UTR CAA 90 bp TGTACCCACGGAGGAGCCCTTGGGAATGACGGGCATAAGGGCATGCTGGATGGCTTCCTTTCACTATCATaGTCATCACTCCCTTCTTCC +
Preference number: 5 (lower is better)
Translates to: CTHGGALGNDGHKGMLDGFLSLS*SSLPSS
Trigger: GGAAGAAGGGAGTGATGACAATGATAGTGAAAGGAA...GCCATCCAGCATGCCCTTATGCCCGTCATTCCCAAGGGCTCCTCCGTGGGTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CAA 90 bp CACAGAGATATCTCTGTGCAAGTTGGTTCCTGTACCCACGGAGGAGCCCTTGGGATATCTCTGTGCAAGTaGGTTCCTGTACCCACGGAG +
Preference number: 5 (lower is better)
Translates to: HRDISVQVGSCTHGGALGISLCK*VPVPTE
Trigger: CTCCGTGGGTACAGGAACCAACTTGCACAGAGATAT...CCCAAGGGCTCCTCCGTGGGTACAGGAACCAACTTGCACAGAGATATCTCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CAA 90 bp AGAGATATCTCTGTGCAAGTTGGTTCCTGTACCCACGGAGGAGCCCTTGGGAATTTGAATCTGCAATCTTaGCACTGCAAGCCCTGCCTG +
Preference number: 5 (lower is better)
Translates to: RDISVQVGSCTHGGALGNLNLQS*HCKPCL
Trigger: CAGGCAGGGCTTGCAGTGCAAAGATTGCAGATTCAA...ATTCCCAAGGGCTCCTCCGTGGGTACAGGAACCAACTTGCACAGAGATATCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CAA 90 bp AGTCTCAGGAGTGTCACTGTGGCTAGCACTTGGATTGATCAGGTGTGTGGGGTAGATGGGCTGGAAGGATaGACCACATTTTCTCCCACA +
Preference number: 5 (lower is better)
Translates to: SLRSVTVASTWIDQVCGVDGLEG*TTFSPT
Trigger: TGTGGGAGAAAATGTGGTCAATCCTTCCAGCCCATC...TACCCCACACACCTGATCAATCCAAGTGCTAGCCACAGTGACACTCCTGAGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CAA 90 bp TGTACCCACGGAGGAGCCCTTGGGAATGACGGGCATAAGGGCATGCTGGATGGCGCTGGCTTTCTTGTTTaGTTGGAAATCGTAATTTGT +
Preference number: 5 (lower is better)
Translates to: CTHGGALGNDGHKGMLDGAGFLV*LEIVIC
Trigger: ACAAATTACGATTTCCAACAAAACAAGAAAGCCAGC...GCCATCCAGCATGCCCTTATGCCCGTCATTCCCAAGGGCTCCTCCGTGGGTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CAA 90 bp AGGCTTAAGAGCACTAGGTCTTGCACAGCTAGGTGCATTGTCTTGAGTTTAAATGGCAGCAGGAAAGTTTaGCAGCCGCTGAGCCAGGAG +
Preference number: 5 (lower is better)
Translates to: RLKSTRSCTARCIVLSLNGSRKV*QPLSQE
Trigger: CTCCTGGCTCAGCGGCTGCAAAACTTTCCTGCTGCC...ATTTAAACTCAAGACAATGCACCTAGCTGTGCAAGACCTAGTGCTCTTAAGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331968.11
CDS-3UTR CAA 90 bp CACAGAGATATCTCTGTGCAAGTTGGTTCCTGTACCCACGGAGGAGCCCTTGGGCTCACACCGCTGCAATaGTTGGGTATTTTAAATGCA +
Preference number: 5 (lower is better)
Translates to: HRDISVQVGSCTHGGALGLTPLQ*LGILNA
Trigger: TGCATTTAAAATACCCAACAATTGCAGCGGTGTGAG...CCCAAGGGCTCCTCCGTGGGTACAGGAACCAACTTGCACAGAGATATCTCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CAA 90 bp GTCTGGGTCTGGATCTTGCATCTCGCCACTGTCGTTCTGGCACTCTGCCATTGCTGTATGATTGAGAATTaGACCTCTTCTCTCGACCAA +
Preference number: 5 (lower is better)
Translates to: VWVWILHLATVVLALCHCCMIEN*TSSLDQ
Trigger: TTGGTCGAGAGAAGAGGTCAAATTCTCAATCATACA...GCAATGGCAGAGTGCCAGAACGACAGTGGCGAGATGCAAGATCCAGACCCAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CAA 90 bp CTGACAGAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTCCCACGGAGGAGCCCTaGGGAATGACGGGCATAAGG +
Preference number: 5 (lower is better)
Translates to: LTENNGSSARQMLNLTVCPTEEP*GMTGIR
Trigger: CCTTATGCCCGTCATTCCCAAGGGCTCCTCCGTGGG...ACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTCTGTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CAA 90 bp ATTGCTTCTTCCATATCATCCATGAGCCCACTGTTCCTTTCACTATCATTGTCACCCACGGAGGAGCCCTaGGGAATGACGGGCATAAGG +
Preference number: 5 (lower is better)
Translates to: IASSISSMSPLFLSLSLSPTEEP*GMTGIR
Trigger: CCTTATGCCCGTCATTCCCAAGGGCTCCTCCGTGGG...TGACAATGATAGTGAAAGGAACAGTGGGCTCATGGATGATATGGAAGAAGCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CAA 90 bp GTCTGGATCTTGCATCTCGCCACTGTCGTTCTGGCACTCTGCCATTGCCATCTCAGCTGCATTCTGAATTaGGTCGTGTATGTCTTCATC +
Preference number: 5 (lower is better)
Translates to: VWILHLATVVLALCHCHLSCILN*VVYVFI
Trigger: GATGAAGACATACACGACCAAATTCAGAATGCAGCT...GAGATGGCAATGGCAGAGTGCCAGAACGACAGTGGCGAGATGCAAGATCCAGAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CAA 90 bp GGCATAAGGGCATGCTGGATGGCTATCTCCCACATCCTGGCCACATCTGCACCAAATGCTTCTGTTGATTaGTCTTGGCAACTCAGATAC +
Preference number: 5 (lower is better)
Translates to: GIRACWMAISHILATSAPNASVD*SWQLRY
Trigger: GTATCTGAGTTGCCAAGACAAATCAACAGAAGCATT...TGGTGCAGATGTGGCCAGGATGTGGGAGATAGCCATCCAGCATGCCCTTATGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CAA 90 bp TGTTGGCGTCCTCGTGGTCTGGGTCTGGATCTTGCATCTCGCCACTGTCGTTCTAATGCTTCTGTTGATTaGTCTTGGCAACTCAGATAC +
Preference number: 5 (lower is better)
Translates to: CWRPRGLGLDLASRHCRSNASVD*SWQLRY
Trigger: GTATCTGAGTTGCCAAGACAAATCAACAGAAGCATT...AGAACGACAGTGGCGAGATGCAAGATCCAGACCCAGACCACGAGGACGCCAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CAA 90 bp GTCTGGATCTTGCATCTCGCCACTGTCGTTCTGGCACTCTGCCATTGCCATCTCTCTTGTCAAGGTGAATaGGTCGTCCAATGTATGATT +
Preference number: 5 (lower is better)
Translates to: VWILHLATVVLALCHCHLSCQGE*VVQCMI
Trigger: AATCATACATTGGACGACCAATTCACCTTGACAAGA...GAGATGGCAATGGCAGAGTGCCAGAACGACAGTGGCGAGATGCAAGATCCAGAC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CAA 90 bp GCATTTAGGCTTAAGAGCACTAGGTCTTGCACAGCTAGGTGCATTGTCTTGAGTCGCCAAGGCAGTTGTTaGGTACTTTCGGTGCACAAC +
Preference number: 5 (lower is better)
Translates to: AFRLKSTRSCTARCIVLSRQGSC*VLSVHN
Trigger: GTTGTGCACCGAAAGTACCAAACAACTGCCTTGGCG...ACTCAAGACAATGCACCTAGCTGTGCAAGACCTAGTGCTCTTAAGCCTAAATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR CAA 90 bp ATCTCTGCATCTTGGACCATTGCTTCTTCCATATCATCCATGAGCCCACTGTTCCGCCAAGGCAGTTGTTaGGTACTTTCGGTGCACAAC +
Preference number: 5 (lower is better)
Translates to: ISASWTIASSISSMSPLFRQGSC*VLSVHN
Trigger: GTTGTGCACCGAAAGTACCAAACAACTGCCTTGGCG...GAACAGTGGGCTCATGGATGATATGGAAGAAGCAATGGTCCAAGATGCAGAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CAA 90 bp CTGACAGAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTGGACTGATGGTTCTGTaGGCGTCCTCGTGGTCTGGG +
Preference number: 5 (lower is better)
Translates to: LTENNGSSARQMLNLTVCGLMVL*ASSWSG
Trigger: CCCAGACCACGAGGACGCCAACAGAACCATCAGTCC...ACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTCTGTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CAA 90 bp GTCTGGATCTTGCATCTCGCCACTGTCGTTCTGGCACTCTGCCATTGCCATCTCGCTAGGTGCATTGTCTaGAGTTTAAATATACTGAGG +
Preference number: 5 (lower is better)
Translates to: VWILHLATVVLALCHCHLARCIV*SLNILR
Trigger: CCTCAGTATATTTAAACTCAAGACAATGCACCTAGC...GAGATGGCAATGGCAGAGTGCCAGAACGACAGTGGCGAGATGCAAGATCCAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651571.1
CDS-3UTR CAA 90 bp GCATTTAGGCTTAAGAGCACTAGGTCTTGCACAGCTAGGTGCATTGTCTTGAGTTTCACATTTAAGACCTaGACGTACCAGCCCCCACAG +
Preference number: 5 (lower is better)
Translates to: AFRLKSTRSCTARCIVLSFTFKT*TYQPPQ
Trigger: CTGTGGGGGCTGGTACGTCAAGGTCTTAAATGTGAA...ACTCAAGACAATGCACCTAGCTGTGCAAGACCTAGTGCTCTTAAGCCTAAATGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR CAA 90 bp TTAATGGTCACTTCGCCAAGGCAGTTGTTTGGTACTTTCGGTGCACAACGTTTACCCTTCAGAAGCTTCTaGCAGTACTGGCACACTGTG +
Preference number: 5 (lower is better)
Translates to: LMVTSPRQLFGTFGAQRLPFRSF*QYWHTV
Trigger: CACAGTGTGCCAGTACTGCAAGAAGCTTCTGAAGGG...TAAACGTTGTGCACCGAAAGTACCAAACAACTGCCTTGGCGAAGTGACCATTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CAA 90 bp TGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTATTTATTAGTTCCAGGACTGATGGTTCTGTaGGCGTCCTCGTGGTCTGGG +
Preference number: 5 (lower is better)
Translates to: WQFCKANVKPDRMYLLVPGLMVL*ASSWSG
Trigger: CCCAGACCACGAGGACGCCAACAGAACCATCAGTCC...TGGAACTAATAAATACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CAA 90 bp ACACCAAACAGAACTACTTCACAGATACATTCTGTCTCTTACCAAAATGAAGCTCCCACGGAGGAGCCCTaGGGAATGACGGGCATAAGG +
Preference number: 5 (lower is better)
Translates to: TPNRTTSQIHSVSYQNEAPTEEP*GMTGIR
Trigger: CCTTATGCCCGTCATTCCCAAGGGCTCCTCCGTGGG...AGCTTCATTTTGGTAAGAGACAGAATGTATCTGTGAAGTAGTTCTGTTTGGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR CAA 90 bp CACCCTACATTCTACAATAAACTAAGTCATCCCCAAGAAGTCTTTCTTCATTCTCCCACGGAGGAGCCCTaGGGAATGACGGGCATAAGG +
Preference number: 5 (lower is better)
Translates to: HPTFYNKLSHPQEVFLHSPTEEP*GMTGIR
Trigger: CCTTATGCCCGTCATTCCCAAGGGCTCCTCCGTGGG...AGAATGAAGAAAGACTTCTTGGGGATGACTTAGTTTATTGTAGAATGTAGGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546371.1
CDS-3UTR CAA 90 bp GTCTGGATCTTGCATCTCGCCACTGTCGTTCTGGCACTCTGCCATTGCCATCTCACTTGCAGCAAATTGTaGATAAGATCAATGGCTTCA +
Preference number: 5 (lower is better)
Translates to: VWILHLATVVLALCHCHLTCSKL*IRSMAS
Trigger: TGAAGCCATTGATCTTATCAACAATTTGCTGCAAGT...GAGATGGCAATGGCAGAGTGCCAGAACGACAGTGGCGAGATGCAAGATCCAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CAA 90 bp AGAGATATCTCTGTGCAAGTTGGTTCCTGTACCCACGGAGGAGCCCTTGGGAATAAGAAAAACACTGATTaGCAAAGGCACAGTGGAGAC +
Preference number: 5 (lower is better)
Translates to: RDISVQVGSCTHGGALGNKKNTD*QRHSGD
Trigger: GTCTCCACTGTGCCTTTGCAAATCAGTGTTTTTCTT...ATTCCCAAGGGCTCCTCCGTGGGTACAGGAACCAACTTGCACAGAGATATCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651571.1
CDS-3UTR CAA 90 bp GACAACACCAATGGGACACACCAAACAGAACTACTTCACAGATACATTCTGTCTCCCTTCAGAAGCTTCTaGCAGTACTGGCACACTGTG +
Preference number: 5 (lower is better)
Translates to: DNTNGTHQTELLHRYILSPFRSF*QYWHTV
Trigger: CACAGTGTGCCAGTACTGCAAGAAGCTTCTGAAGGG...AGACAGAATGTATCTGTGAAGTAGTTCTGTTTGGTGTGTCCCATTGGTGTTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR CAA 90 bp ACCGAGGGCTTTCATTTCTGTTTCTTCAGTCTCAGGAGTGTCACTGTGGCTAGCTTCCTTTCACTATCATaGTCATCACTCCCTTCTTCC +
Preference number: 5 (lower is better)
Translates to: TEGFHFCFFSLRSVTVASFLSLS*SSLPSS
Trigger: GGAAGAAGGGAGTGATGACAATGATAGTGAAAGGAA...GCTAGCCACAGTGACACTCCTGAGACTGAAGAAACAGAAATGAAAGCCCTCGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CAA 90 bp CATTGCCATCTCTGCATCTTGGACCATTGCTTCTTCCATATCATCCATGAGCCCCTGCATCTTGGACCATaGCTTCTTCCATATCATCCA +
Preference number: 5 (lower is better)
Translates to: HCHLCILDHCFFHIIHEPLHLGP*LLPYHP
Trigger: TGGATGATATGGAAGAAGCAATGGTCCAAGATGCAG...GGGCTCATGGATGATATGGAAGAAGCAATGGTCCAAGATGCAGAGATGGCAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CAA 90 bp GTTTCGTGTTTCAGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATACCCACGGAGGAGCCCTaGGGAATGACGGGCATAAGG +
Preference number: 5 (lower is better)
Translates to: VSCFRELLLIQHSWSHKIPTEEP*GMTGIR
Trigger: CCTTATGCCCGTCATTCCCAAGGGCTCCTCCGTGGG...TATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCTGAAACACGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CAA 90 bp ACCGAGGGCTTTCATTTCTGTTTCTTCAGTCTCAGGAGTGTCACTGTGGCTAGCAGCTGCATTCTGAATTaGGTCGTGTATGTCTTCATC +
Preference number: 5 (lower is better)
Translates to: TEGFHFCFFSLRSVTVASSCILN*VVYVFI
Trigger: GATGAAGACATACACGACCAAATTCAGAATGCAGCT...GCTAGCCACAGTGACACTCCTGAGACTGAAGAAACAGAAATGAAAGCCCTCGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CAA 90 bp GAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTATTTATGGCAGCAGGAAAGTTTaGCAGCCGCTGAGCCAGGAG +
Preference number: 5 (lower is better)
Translates to: ENNGSSARQMLNLTVCIYGSRKV*QPLSQE
Trigger: CTCCTGGCTCAGCGGCTGCAAAACTTTCCTGCTGCC...ATAAATACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331968.11
ENST00000415220.6
CDS-3UTR CAA 90 bp CATTGCCATCTCTGCATCTTGGACCATTGCTTCTTCCATATCATCCATGAGCCCCTCACACCGCTGCAATaGTTGGGTATTTTAAATGCA +
Preference number: 5 (lower is better)
Translates to: HCHLCILDHCFFHIIHEPLTPLQ*LGILNA
Trigger: TGCATTTAAAATACCCAACAATTGCAGCGGTGTGAG...GGGCTCATGGATGATATGGAAGAAGCAATGGTCCAAGATGCAGAGATGGCAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CAA 90 bp CATCTGACAGAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTACCCTTCAGAAGCTTCTaGCAGTACTGGCACACTGTG +
Preference number: 5 (lower is better)
Translates to: HLTENNGSSARQMLNLTVPFRSF*QYWHTV
Trigger: CACAGTGTGCCAGTACTGCAAGAAGCTTCTGAAGGG...TACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTCTGTCAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CAA 90 bp CCCTTTTCACTTGACAAGATCATTTCCAGCATGTCTCCATGGAGTTTTTCCATACCCTTCAGAAGCTTCTaGCAGTACTGGCACACTGTG +
Preference number: 5 (lower is better)
Translates to: PFSLDKIISSMSPWSFSIPFRSF*QYWHTV
Trigger: CACAGTGTGCCAGTACTGCAAGAAGCTTCTGAAGGG...TATGGAAAAACTCCATGGAGACATGCTGGAAATGATCTTGTCAAGTGAAAAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CAA 90 bp CTGACAGAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTCGCCAAGGCAGTTGTTaGGTACTTTCGGTGCACAAC +
Preference number: 5 (lower is better)
Translates to: LTENNGSSARQMLNLTVCRQGSC*VLSVHN
Trigger: GTTGTGCACCGAAAGTACCAAACAACTGCCTTGGCG...ACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTCTGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CAA 90 bp GAGTTTGTTTACAATGACAACACCAATGGGACACACCAAACAGAACTACTTCACTCTGGCACTCTGCCATaGCCATCTCTGCATCTTGGA +
Preference number: 5 (lower is better)
Translates to: EFVYNDNTNGTHQTELLHSGTLP*PSLHLG
Trigger: TCCAAGATGCAGAGATGGCAATGGCAGAGTGCCAGA...GTGAAGTAGTTCTGTTTGGTGTGTCCCATTGGTGTTGTCATTGTAAACAAACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR CAA 90 bp TCGTGTTTCAGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATACAAGGACTGATGGTTCTGTaGGCGTCCTCGTGGTCTGGG +
Preference number: 5 (lower is better)
Translates to: SCFRELLLIQHSWSHKIQGLMVL*ASSWSG
Trigger: CCCAGACCACGAGGACGCCAACAGAACCATCAGTCC...TTGTATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCTGAAACACGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CAA 90 bp GTTTCGTGTTTCAGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATAGGACTGATGGTTCTGTaGGCGTCCTCGTGGTCTGGG +
Preference number: 5 (lower is better)
Translates to: VSCFRELLLIQHSWSHKIGLMVL*ASSWSG
Trigger: CCCAGACCACGAGGACGCCAACAGAACCATCAGTCC...TATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCTGAAACACGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CAA 90 bp GACAACACCAATGGGACACACCAAACAGAACTACTTCACAGATACATTCTGTCTTTCCTCTTCGTGTGTTaGACAGACTGCACTACCCTC +
Preference number: 5 (lower is better)
Translates to: DNTNGTHQTELLHRYILSFLFVC*TDCTTL
Trigger: GAGGGTAGTGCAGTCTGTCAAACACACGAAGAGGAA...AGACAGAATGTATCTGTGAAGTAGTTCTGTTTGGTGTGTCCCATTGGTGTTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR CAA 90 bp CTGACAGAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTTGGCTAGCACTTGGATaGATCAGGTGTGTGGGGTAC +
Preference number: 5 (lower is better)
Translates to: LTENNGSSARQMLNLTVCWLALG*IRCVGY
Trigger: GTACCCCACACACCTGATCAATCCAAGTGCTAGCCA...ACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTCTGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CAA 90 bp CTGACAGAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTTTCACATTTAAGACCTaGACGTACCAGCCCCCACAG +
Preference number: 5 (lower is better)
Translates to: LTENNGSSARQMLNLTVCFTFKT*TYQPPQ
Trigger: CTGTGGGGGCTGGTACGTCAAGGTCTTAAATGTGAA...ACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTCTGTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CAA 90 bp TGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTATTTATTAGTTCCACCCTTCAGAAGCTTCTaGCAGTACTGGCACACTGTG +
Preference number: 5 (lower is better)
Translates to: WQFCKANVKPDRMYLLVPPFRSF*QYWHTV
Trigger: CACAGTGTGCCAGTACTGCAAGAAGCTTCTGAAGGG...TGGAACTAATAAATACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CAA 90 bp GACAACACCAATGGGACACACCAAACAGAACTACTTCACAGATACATTCTGTCTTGCCATCTCTGCATCTaGGACCATTGCTTCTTCCAT +
Preference number: 5 (lower is better)
Translates to: DNTNGTHQTELLHRYILSCHLCI*DHCFFH
Trigger: ATGGAAGAAGCAATGGTCCAAGATGCAGAGATGGCA...AGACAGAATGTATCTGTGAAGTAGTTCTGTTTGGTGTGTCCCATTGGTGTTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR CAA 90 bp TGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTATTTATTAGTTCCATCTGGCACTCTGCCATaGCCATCTCTGCATCTTGGA +
Preference number: 5 (lower is better)
Translates to: WQFCKANVKPDRMYLLVPSGTLP*PSLHLG
Trigger: TCCAAGATGCAGAGATGGCAATGGCAGAGTGCCAGA...TGGAACTAATAAATACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CAA 90 bp ACACACCAAACAGAACTACTTCACAGATACATTCTGTCTCTTACCAAAATGAAGGTCTGGGTCTGGATCTaGCATCTCGCCACTGTCGTT +
Preference number: 5 (lower is better)
Translates to: THQTELLHRYILSLTKMKVWVWI*HLATVV
Trigger: AACGACAGTGGCGAGATGCAAGATCCAGACCCAGAC...CTTCATTTTGGTAAGAGACAGAATGTATCTGTGAAGTAGTTCTGTTTGGTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR CAA 90 bp CATCTGACAGAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTAGATGGGCTGGAAGGATaGACCACATTTTCTCCCACA +
Preference number: 5 (lower is better)
Translates to: HLTENNGSSARQMLNLTVDGLEG*TTFSPT
Trigger: TGTGGGAGAAAATGTGGTCAATCCTTCCAGCCCATC...TACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTCTGTCAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CAA 90 bp CTGACAGAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTATATCTCTGTGCAAGTaGGTTCCTGTACCCACGGAG +
Preference number: 5 (lower is better)
Translates to: LTENNGSSARQMLNLTVCISLCK*VPVPTE
Trigger: CTCCGTGGGTACAGGAACCAACTTGCACAGAGATAT...ACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTCTGTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CAA 90 bp CATCTGACAGAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTAATATCTCTGTGCAAGTaGGTTCCTGTACCCACGGAG +
Preference number: 5 (lower is better)
Translates to: HLTENNGSSARQMLNLTVISLCK*VPVPTE
Trigger: CTCCGTGGGTACAGGAACCAACTTGCACAGAGATAT...TACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTCTGTCAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CAA 90 bp ATTGCTTCTTCCATATCATCCATGAGCCCACTGTTCCTTTCACTATCATTGTCAATATCTCTGTGCAAGTaGGTTCCTGTACCCACGGAG +
Preference number: 5 (lower is better)
Translates to: IASSISSMSPLFLSLSLSISLCK*VPVPTE
Trigger: CTCCGTGGGTACAGGAACCAACTTGCACAGAGATAT...TGACAATGATAGTGAAAGGAACAGTGGGCTCATGGATGATATGGAAGAAGCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CAA 90 bp GCATTTAGGCTTAAGAGCACTAGGTCTTGCACAGCTAGGTGCATTGTCTTGAGTAGCTGCATTCTGAATTaGGTCGTGTATGTCTTCATC +
Preference number: 5 (lower is better)
Translates to: AFRLKSTRSCTARCIVLSSCILN*VVYVFI
Trigger: GATGAAGACATACACGACCAAATTCAGAATGCAGCT...ACTCAAGACAATGCACCTAGCTGTGCAAGACCTAGTGCTCTTAAGCCTAAATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR CAA 90 bp GCATTTAGGCTTAAGAGCACTAGGTCTTGCACAGCTAGGTGCATTGTCTTGAGTAAGAAAAACACTGATTaGCAAAGGCACAGTGGAGAC +
Preference number: 5 (lower is better)
Translates to: AFRLKSTRSCTARCIVLSKKNTD*QRHSGD
Trigger: GTCTCCACTGTGCCTTTGCAAATCAGTGTTTTTCTT...ACTCAAGACAATGCACCTAGCTGTGCAAGACCTAGTGCTCTTAAGCCTAAATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR CAA 90 bp GCATTTAGGCTTAAGAGCACTAGGTCTTGCACAGCTAGGTGCATTGTCTTGAGTTTTCCCACATGGGTTTaGGAGTTGTTCATAGAACAC +
Preference number: 5 (lower is better)
Translates to: AFRLKSTRSCTARCIVLSFPTWV*ELFIEH
Trigger: GTGTTCTATGAACAACTCCAAAACCCATGTGGGAAA...ACTCAAGACAATGCACCTAGCTGTGCAAGACCTAGTGCTCTTAAGCCTAAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR CAA 90 bp ATTTTCTCCCACATAATACACTACATTTGCCGTAGTGATTTCGAAACAATGAGGCGCCAAGGCAGTTGTTaGGTACTTTCGGTGCACAAC +
Preference number: 5 (lower is better)
Translates to: IFSHIIHYICRSDFETMRRQGSC*VLSVHN
Trigger: GTTGTGCACCGAAAGTACCAAACAACTGCCTTGGCG...CCTCATTGTTTCGAAATCACTACGGCAAATGTAGTGTATTATGTGGGAGAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CAA 90 bp GAGTTTGTTTACAATGACAACACCAATGGGACACACCAAACAGAACTACTTCACTGCCATCTCTGCATCTaGGACCATTGCTTCTTCCAT +
Preference number: 5 (lower is better)
Translates to: EFVYNDNTNGTHQTELLHCHLCI*DHCFFH
Trigger: ATGGAAGAAGCAATGGTCCAAGATGCAGAGATGGCA...GTGAAGTAGTTCTGTTTGGTGTGTCCCATTGGTGTTGTCATTGTAAACAAACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR CAA 90 bp ACACCAAACAGAACTACTTCACAGATACATTCTGTCTCTTACCAAAATGAAGCTTCTGGCACTCTGCCATaGCCATCTCTGCATCTTGGA +
Preference number: 5 (lower is better)
Translates to: TPNRTTSQIHSVSYQNEASGTLP*PSLHLG
Trigger: TCCAAGATGCAGAGATGGCAATGGCAGAGTGCCAGA...AGCTTCATTTTGGTAAGAGACAGAATGTATCTGTGAAGTAGTTCTGTTTGGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR CAA 90 bp GAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTATTTATGTCTGGGTCTGGATCTaGCATCTCGCCACTGTCGTT +
Preference number: 5 (lower is better)
Translates to: ENNGSSARQMLNLTVCIYVWVWI*HLATVV
Trigger: AACGACAGTGGCGAGATGCAAGATCCAGACCCAGAC...ATAAATACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CAA 90 bp GTTTCGTGTTTCAGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATAGTCTGGGTCTGGATCTaGCATCTCGCCACTGTCGTT +
Preference number: 5 (lower is better)
Translates to: VSCFRELLLIQHSWSHKIVWVWI*HLATVV
Trigger: AACGACAGTGGCGAGATGCAAGATCCAGACCCAGAC...TATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCTGAAACACGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CAA 90 bp TTAATGGTCACTTCGCCAAGGCAGTTGTTTGGTACTTTCGGTGCACAACGTTTAGAAGGTTCTGTAGAATaGCAACCTCATTACGAAGCT +
Preference number: 5 (lower is better)
Translates to: LMVTSPRQLFGTFGAQRLEGSVE*QPHYEA
Trigger: AGCTTCGTAATGAGGTTGCAATTCTACAGAACCTTC...TAAACGTTGTGCACCGAAAGTACCAAACAACTGCCTTGGCGAAGTGACCATTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CAA 90 bp ACACACCAAACAGAACTACTTCACAGATACATTCTGTCTCTTACCAAAATGAAGTGGCTAGCACTTGGATaGATCAGGTGTGTGGGGTAC +
Preference number: 5 (lower is better)
Translates to: THQTELLHRYILSLTKMKWLALG*IRCVGY
Trigger: GTACCCCACACACCTGATCAATCCAAGTGCTAGCCA...CTTCATTTTGGTAAGAGACAGAATGTATCTGTGAAGTAGTTCTGTTTGGTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR CAA 90 bp CTTTTATTTAGACACCCTACATTCTACAATAAACTAAGTCATCCCCAAGAAGTCGACTCACTGTGCAAGTaGGTTCCTGTACCCACGGAG +
Preference number: 5 (lower is better)
Translates to: LLFRHPTFYNKLSHPQEVDSLCK*VPVPTE
Trigger: CTCCGTGGGTACAGGAACCAACTTGCACAGTGAGTC...GACTTCTTGGGGATGACTTAGTTTATTGTAGAATGTAGGGTGTCTAAATAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546371.1
CDS-3UTR CAA 90 bp GTTTCGTGTTTCAGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATACGCCAAGGCAGTTGTTaGGTACTTTCGGTGCACAAC +
Preference number: 5 (lower is better)
Translates to: VSCFRELLLIQHSWSHKIRQGSC*VLSVHN
Trigger: GTTGTGCACCGAAAGTACCAAACAACTGCCTTGGCG...TATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCTGAAACACGAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CAA 90 bp GAGTTTGTTTACAATGACAACACCAATGGGACACACCAAACAGAACTACTTCACCTGCATCTTGGACCATaGCTTCTTCCATATCATCCA +
Preference number: 5 (lower is better)
Translates to: EFVYNDNTNGTHQTELLHLHLGP*LLPYHP
Trigger: TGGATGATATGGAAGAAGCAATGGTCCAAGATGCAG...GTGAAGTAGTTCTGTTTGGTGTGTCCCATTGGTGTTGTCATTGTAAACAAACTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR CAA 90 bp CTGACAGAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTCTGCATCTTGGACCATaGCTTCTTCCATATCATCCA +
Preference number: 5 (lower is better)
Translates to: LTENNGSSARQMLNLTVCLHLGP*LLPYHP
Trigger: TGGATGATATGGAAGAAGCAATGGTCCAAGATGCAG...ACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTCTGTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CAA 90 bp AGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATACAAATGCTTCTGTCTGGCACTCTGCCATaGCCATCTCTGCATCTTGGA +
Preference number: 5 (lower is better)
Translates to: RELLLIQHSWSHKIQMLLSGTLP*PSLHLG
Trigger: TCCAAGATGCAGAGATGGCAATGGCAGAGTGCCAGA...CAGAAGCATTTGTATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CAA 90 bp CTGACAGAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTACCTGCCCTTTTCACTaGACAAGATCATTTCCAGCA +
Preference number: 5 (lower is better)
Translates to: LTENNGSSARQMLNLTVCTCPFH*TRSFPA
Trigger: TGCTGGAAATGATCTTGTCAAGTGAAAAGGGCAGGT...ACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTCTGTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CAA 90 bp AGGCTTAAGAGCACTAGGTCTTGCACAGCTAGGTGCATTGTCTTGAGTTTAAATAGCTGCATTCTGAATTaGGTCGTGTATGTCTTCATC +
Preference number: 5 (lower is better)
Translates to: RLKSTRSCTARCIVLSLNSCILN*VVYVFI
Trigger: GATGAAGACATACACGACCAAATTCAGAATGCAGCT...ATTTAAACTCAAGACAATGCACCTAGCTGTGCAAGACCTAGTGCTCTTAAGCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR CAA 90 bp AGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATACAAATGCTTCTGTGGCTAGCACTTGGATaGATCAGGTGTGTGGGGTAC +
Preference number: 5 (lower is better)
Translates to: RELLLIQHSWSHKIQMLLWLALG*IRCVGY
Trigger: GTACCCCACACACCTGATCAATCCAAGTGCTAGCCA...CAGAAGCATTTGTATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CAA 90 bp GAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTATTTATTGGCTAGCACTTGGATaGATCAGGTGTGTGGGGTAC +
Preference number: 5 (lower is better)
Translates to: ENNGSSARQMLNLTVCIYWLALG*IRCVGY
Trigger: GTACCCCACACACCTGATCAATCCAAGTGCTAGCCA...ATAAATACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS TCA 90 bp TTCAGTTTGCAGACCCAGCTATGGCTTTCAACTCCTTTCTCTGCTTaGTTAATCCAACTTACTGTCTTACTTTTCCACTTGTATGGTCTC +
Preference number: 5 (lower is better)
Translates to: FSLQTQLWLSTPFSA*LIQLTVLLFHLYGL
Trigger: GAGACCATACAAGTGGAAAAGTAAGACAGTAAGTTGGATTAATCAAGCAGAGAAAGGAGTTGAAAGCCATAGCTGGGTCTGCAAACTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549503.1
CDS-3UTR CAA 90 bp AGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATACAAATGCTTCTGTTCACATTTAAGACCTaGACGTACCAGCCCCCACAG +
Preference number: 5 (lower is better)
Translates to: RELLLIQHSWSHKIQMLLFTFKT*TYQPPQ
Trigger: CTGTGGGGGCTGGTACGTCAAGGTCTTAAATGTGAA...CAGAAGCATTTGTATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CAA 90 bp CTGACAGAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTCTCACACCGCTGCAATaGTTGGGTATTTTAAATGCA +
Preference number: 5 (lower is better)
Translates to: LTENNGSSARQMLNLTVCLTPLQ*LGILNA
Trigger: TGCATTTAAAATACCCAACAATTGCAGCGGTGTGAG...ACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTCTGTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CAA 90 bp GACAACACCAATGGGACACACCAAACAGAACTACTTCACAGATACATTCTGTCTTGTATGATTGAGAATTaGACCTCTTCTCTCGACCAA +
Preference number: 5 (lower is better)
Translates to: DNTNGTHQTELLHRYILSCMIEN*TSSLDQ
Trigger: TTGGTCGAGAGAAGAGGTCAAATTCTCAATCATACA...AGACAGAATGTATCTGTGAAGTAGTTCTGTTTGGTGTGTCCCATTGGTGTTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR CAA 90 bp GAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTATTTATTTGAATCTGCAATCTTaGCACTGCAAGCCCTGCCTG +
Preference number: 5 (lower is better)
Translates to: ENNGSSARQMLNLTVCIYLNLQS*HCKPCL
Trigger: CAGGCAGGGCTTGCAGTGCAAAGATTGCAGATTCAA...ATAAATACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CAA 90 bp GTTTCGTGTTTCAGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATATTGAATCTGCAATCTTaGCACTGCAAGCCCTGCCTG +
Preference number: 5 (lower is better)
Translates to: VSCFRELLLIQHSWSHKILNLQS*HCKPCL
Trigger: CAGGCAGGGCTTGCAGTGCAAAGATTGCAGATTCAA...TATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCTGAAACACGAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CAA 90 bp GGAGTTGTTCATAGAACACTGGAAATAATCGACTCTTCAAGAGTTTGTTTACAATTGAATCTGCAATCTTaGCACTGCAAGCCCTGCCTG +
Preference number: 5 (lower is better)
Translates to: GVVHRTLEIIDSSRVCLQLNLQS*HCKPCL
Trigger: CAGGCAGGGCTTGCAGTGCAAAGATTGCAGATTCAA...TTGTAAACAAACTCTTGAAGAGTCGATTATTTCCAGTGTTCTATGAACAACTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR CAA 90 bp CATCTGACAGAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATTCCTTTCACTATCATaGTCATCACTCCCTTCTTCC +
Preference number: 5 (lower is better)
Translates to: HLTENNGSSARQMLNLTVFLSLS*SSLPSS
Trigger: GGAAGAAGGGAGTGATGACAATGATAGTGAAAGGAA...TACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTCTGTCAGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CAA 90 bp CTGACAGAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTTTCCTTTCACTATCATaGTCATCACTCCCTTCTTCC +
Preference number: 5 (lower is better)
Translates to: LTENNGSSARQMLNLTVCFLSLS*SSLPSS
Trigger: GGAAGAAGGGAGTGATGACAATGATAGTGAAAGGAA...ACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTCTGTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CAA 90 bp GTTTCGTGTTTCAGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATATTCCTCTTCGTGTGTTaGACAGACTGCACTACCCTC +
Preference number: 5 (lower is better)
Translates to: VSCFRELLLIQHSWSHKIFLFVC*TDCTTL
Trigger: GAGGGTAGTGCAGTCTGTCAAACACACGAAGAGGAA...TATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCTGAAACACGAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CAA 90 bp TCGTGTTTCAGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATACAATTCCTCTTCGTGTGTTaGACAGACTGCACTACCCTC +
Preference number: 5 (lower is better)
Translates to: SCFRELLLIQHSWSHKIQFLFVC*TDCTTL
Trigger: GAGGGTAGTGCAGTCTGTCAAACACACGAAGAGGAA...TTGTATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCTGAAACACGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CAA 90 bp TTTAGACACCCTACATTCTACAATAAACTAAGTCATCCCCAAGAAGTCTTTCTTGATGGGCTGGAAGGATaGACCACATTTTCTCCCACA +
Preference number: 5 (lower is better)
Translates to: FRHPTFYNKLSHPQEVFLDGLEG*TTFSPT
Trigger: TGTGGGAGAAAATGTGGTCAATCCTTCCAGCCCATC...AAGAAAGACTTCTTGGGGATGACTTAGTTTATTGTAGAATGTAGGGTGTCTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546371.1
CDS-3UTR CAA 90 bp CTGACAGAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTGAAGGTTCTGTAGAATaGCAACCTCATTACGAAGCT +
Preference number: 5 (lower is better)
Translates to: LTENNGSSARQMLNLTVCEGSVE*QPHYEA
Trigger: AGCTTCGTAATGAGGTTGCAATTCTACAGAACCTTC...ACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTCTGTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CAA 90 bp GACAACACCAATGGGACACACCAAACAGAACTACTTCACAGATACATTCTGTCTAATGCTTCTGTTGATTaGTCTTGGCAACTCAGATAC +
Preference number: 5 (lower is better)
Translates to: DNTNGTHQTELLHRYILSNASVD*SWQLRY
Trigger: GTATCTGAGTTGCCAAGACAAATCAACAGAAGCATT...AGACAGAATGTATCTGTGAAGTAGTTCTGTTTGGTGTGTCCCATTGGTGTTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR CAA 90 bp CATCTGACAGAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATTTCCCACATGGGTTTaGGAGTTGTTCATAGAACAC +
Preference number: 5 (lower is better)
Translates to: HLTENNGSSARQMLNLTVFPTWV*ELFIEH
Trigger: GTGTTCTATGAACAACTCCAAAACCCATGTGGGAAA...TACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTCTGTCAGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR CAA 90 bp CTGACAGAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTACACCGCTGCAATTGTaGGGTATTTTAAATGCACAT +
Preference number: 5 (lower is better)
Translates to: LTENNGSSARQMLNLTVCTPLQL*GILNAH
Trigger: ATGTGCATTTAAAATACCCAACAATTGCAGCGGTGT...ACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTCTGTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CAA 90 bp GAGTTTGTTTACAATGACAACACCAATGGGACACACCAAACAGAACTACTTCACACACCGCTGCAATTGTaGGGTATTTTAAATGCACAT +
Preference number: 5 (lower is better)
Translates to: EFVYNDNTNGTHQTELLHTPLQL*GILNAH
Trigger: ATGTGCATTTAAAATACCCAACAATTGCAGCGGTGT...GTGAAGTAGTTCTGTTTGGTGTGTCCCATTGGTGTTGTCATTGTAAACAAACTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR CAA 90 bp GAGTTTGTTTACAATGACAACACCAATGGGACACACCAAACAGAACTACTTCACTGTATGATTGAGAATTaGACCTCTTCTCTCGACCAA +
Preference number: 5 (lower is better)
Translates to: EFVYNDNTNGTHQTELLHCMIEN*TSSLDQ
Trigger: TTGGTCGAGAGAAGAGGTCAAATTCTCAATCATACA...GTGAAGTAGTTCTGTTTGGTGTGTCCCATTGGTGTTGTCATTGTAAACAAACTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR CAA 90 bp CTGACAGAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTTCTTGTCAAGGTGAATaGGTCGTCCAATGTATGATT +
Preference number: 5 (lower is better)
Translates to: LTENNGSSARQMLNLTVCSCQGE*VVQCMI
Trigger: AATCATACATTGGACGACCAATTCACCTTGACAAGA...ACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTCTGTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CAA 90 bp ATTTTCTCCCACATAATACACTACATTTGCCGTAGTGATTTCGAAACAATGAGGCTGCATCTTGGACCATaGCTTCTTCCATATCATCCA +
Preference number: 5 (lower is better)
Translates to: IFSHIIHYICRSDFETMRLHLGP*LLPYHP
Trigger: TGGATGATATGGAAGAAGCAATGGTCCAAGATGCAG...CCTCATTGTTTCGAAATCACTACGGCAAATGTAGTGTATTATGTGGGAGAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CAA 90 bp GGAGTTGTTCATAGAACACTGGAAATAATCGACTCTTCAAGAGTTTGTTTACAATGCCATCTCTGCATCTaGGACCATTGCTTCTTCCAT +
Preference number: 5 (lower is better)
Translates to: GVVHRTLEIIDSSRVCLQCHLCI*DHCFFH
Trigger: ATGGAAGAAGCAATGGTCCAAGATGCAGAGATGGCA...TTGTAAACAAACTCTTGAAGAGTCGATTATTTCCAGTGTTCTATGAACAACTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR CAA 90 bp TCGTGTTTCAGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATACAATGCCATCTCTGCATCTaGGACCATTGCTTCTTCCAT +
Preference number: 5 (lower is better)
Translates to: SCFRELLLIQHSWSHKIQCHLCI*DHCFFH
Trigger: ATGGAAGAAGCAATGGTCCAAGATGCAGAGATGGCA...TTGTATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCTGAAACACGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CAA 90 bp AGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATACAAATGCTTCTGTGCCATCTCTGCATCTaGGACCATTGCTTCTTCCAT +
Preference number: 5 (lower is better)
Translates to: RELLLIQHSWSHKIQMLLCHLCI*DHCFFH
Trigger: ATGGAAGAAGCAATGGTCCAAGATGCAGAGATGGCA...CAGAAGCATTTGTATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CAA 90 bp ACACCAAACAGAACTACTTCACAGATACATTCTGTCTCTTACCAAAATGAAGCTACCTGCCCTTTTCACTaGACAAGATCATTTCCAGCA +
Preference number: 5 (lower is better)
Translates to: TPNRTTSQIHSVSYQNEATCPFH*TRSFPA
Trigger: TGCTGGAAATGATCTTGTCAAGTGAAAAGGGCAGGT...AGCTTCATTTTGGTAAGAGACAGAATGTATCTGTGAAGTAGTTCTGTTTGGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR CAA 90 bp TGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTATTTATTAGTTCCAAGCTGCATTCTGAATTaGGTCGTGTATGTCTTCATC +
Preference number: 5 (lower is better)
Translates to: WQFCKANVKPDRMYLLVPSCILN*VVYVFI
Trigger: GATGAAGACATACACGACCAAATTCAGAATGCAGCT...TGGAACTAATAAATACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CAA 90 bp TGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTATTTATTAGTTCCATGTATGATTGAGAATTaGACCTCTTCTCTCGACCAA +
Preference number: 5 (lower is better)
Translates to: WQFCKANVKPDRMYLLVPCMIEN*TSSLDQ
Trigger: TTGGTCGAGAGAAGAGGTCAAATTCTCAATCATACA...TGGAACTAATAAATACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CAA 90 bp GTTTCGTGTTTCAGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATACTGCATCTTGGACCATaGCTTCTTCCATATCATCCA +
Preference number: 5 (lower is better)
Translates to: VSCFRELLLIQHSWSHKILHLGP*LLPYHP
Trigger: TGGATGATATGGAAGAAGCAATGGTCCAAGATGCAG...TATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCTGAAACACGAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CAA 90 bp CTGACAGAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTGCTGGCTTTCTTGTTTaGTTGGAAATCGTAATTTGT +
Preference number: 5 (lower is better)
Translates to: LTENNGSSARQMLNLTVCAGFLV*LEIVIC
Trigger: ACAAATTACGATTTCCAACAAAACAAGAAAGCCAGC...ACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTCTGTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CAA 90 bp GAGTTTGTTTACAATGACAACACCAATGGGACACACCAAACAGAACTACTTCACGCTGGCTTTCTTGTTTaGTTGGAAATCGTAATTTGT +
Preference number: 5 (lower is better)
Translates to: EFVYNDNTNGTHQTELLHAGFLV*LEIVIC
Trigger: ACAAATTACGATTTCCAACAAAACAAGAAAGCCAGC...GTGAAGTAGTTCTGTTTGGTGTGTCCCATTGGTGTTGTCATTGTAAACAAACTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR CAA 90 bp ACACCAAACAGAACTACTTCACAGATACATTCTGTCTCTTACCAAAATGAAGCTGAAGGTTCTGTAGAATaGCAACCTCATTACGAAGCT +
Preference number: 5 (lower is better)
Translates to: TPNRTTSQIHSVSYQNEAEGSVE*QPHYEA
Trigger: AGCTTCGTAATGAGGTTGCAATTCTACAGAACCTTC...AGCTTCATTTTGGTAAGAGACAGAATGTATCTGTGAAGTAGTTCTGTTTGGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR CAA 90 bp GGAGTTGTTCATAGAACACTGGAAATAATCGACTCTTCAAGAGTTTGTTTACAAACCTGCCCTTTTCACTaGACAAGATCATTTCCAGCA +
Preference number: 5 (lower is better)
Translates to: GVVHRTLEIIDSSRVCLQTCPFH*TRSFPA
Trigger: TGCTGGAAATGATCTTGTCAAGTGAAAAGGGCAGGT...TTGTAAACAAACTCTTGAAGAGTCGATTATTTCCAGTGTTCTATGAACAACTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR CAA 90 bp TCGTGTTTCAGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATACAAACCTGCCCTTTTCACTaGACAAGATCATTTCCAGCA +
Preference number: 5 (lower is better)
Translates to: SCFRELLLIQHSWSHKIQTCPFH*TRSFPA
Trigger: TGCTGGAAATGATCTTGTCAAGTGAAAAGGGCAGGT...TTGTATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCTGAAACACGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CAA 90 bp GTTTCGTGTTTCAGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATAACCTGCCCTTTTCACTaGACAAGATCATTTCCAGCA +
Preference number: 5 (lower is better)
Translates to: VSCFRELLLIQHSWSHKITCPFH*TRSFPA
Trigger: TGCTGGAAATGATCTTGTCAAGTGAAAAGGGCAGGT...TATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCTGAAACACGAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CAA 90 bp CTGACAGAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTACTTGCAGCAAATTGTaGATAAGATCAATGGCTTCA +
Preference number: 5 (lower is better)
Translates to: LTENNGSSARQMLNLTVCTCSKL*IRSMAS
Trigger: TGAAGCCATTGATCTTATCAACAATTTGCTGCAAGT...ACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTCTGTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CAA 90 bp ACACCAAACAGAACTACTTCACAGATACATTCTGTCTCTTACCAAAATGAAGCTTTTCCCACATGGGTTTaGGAGTTGTTCATAGAACAC +
Preference number: 5 (lower is better)
Translates to: TPNRTTSQIHSVSYQNEAFPTWV*ELFIEH
Trigger: GTGTTCTATGAACAACTCCAAAACCCATGTGGGAAA...AGCTTCATTTTGGTAAGAGACAGAATGTATCTGTGAAGTAGTTCTGTTTGGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR CAA 90 bp TCGTGTTTCAGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATACAACTCACACCGCTGCAATaGTTGGGTATTTTAAATGCA +
Preference number: 5 (lower is better)
Translates to: SCFRELLLIQHSWSHKIQLTPLQ*LGILNA
Trigger: TGCATTTAAAATACCCAACAATTGCAGCGGTGTGAG...TTGTATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCTGAAACACGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CAA 90 bp GTTTCGTGTTTCAGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATACTCACACCGCTGCAATaGTTGGGTATTTTAAATGCA +
Preference number: 5 (lower is better)
Translates to: VSCFRELLLIQHSWSHKILTPLQ*LGILNA
Trigger: TGCATTTAAAATACCCAACAATTGCAGCGGTGTGAG...TATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCTGAAACACGAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CAA 90 bp TCGTGTTTCAGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATACAATTCCTTTCACTATCATaGTCATCACTCCCTTCTTCC +
Preference number: 5 (lower is better)
Translates to: SCFRELLLIQHSWSHKIQFLSLS*SSLPSS
Trigger: GGAAGAAGGGAGTGATGACAATGATAGTGAAAGGAA...TTGTATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCTGAAACACGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CAA 90 bp AGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATACAAATGCTTCTGGAAGGTTCTGTAGAATaGCAACCTCATTACGAAGCT +
Preference number: 5 (lower is better)
Translates to: RELLLIQHSWSHKIQMLLEGSVE*QPHYEA
Trigger: AGCTTCGTAATGAGGTTGCAATTCTACAGAACCTTC...CAGAAGCATTTGTATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CAA 90 bp TGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTATTTATTAGTTCCATGTTTCAGGGAACTTTaGTTAATACAACACAGTTGG +
Preference number: 5 (lower is better)
Translates to: WQFCKANVKPDRMYLLVPCFREL*LIQHSW
Trigger: CCAACTGTGTTGTATTAACAAAAGTTCCCTGAAACA...TGGAACTAATAAATACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CAA 90 bp GTTTCGTGTTTCAGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATAAAGAAAAACACTGATTaGCAAAGGCACAGTGGAGAC +
Preference number: 5 (lower is better)
Translates to: VSCFRELLLIQHSWSHKIKKNTD*QRHSGD
Trigger: GTCTCCACTGTGCCTTTGCAAATCAGTGTTTTTCTT...TATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCTGAAACACGAAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR CAA 90 bp TCGTGTTTCAGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATACAAACACCGCTGCAATTGTaGGGTATTTTAAATGCACAT +
Preference number: 5 (lower is better)
Translates to: SCFRELLLIQHSWSHKIQTPLQL*GILNAH
Trigger: ATGTGCATTTAAAATACCCAACAATTGCAGCGGTGT...TTGTATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCTGAAACACGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CAA 90 bp GTTTCGTGTTTCAGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATAACACCGCTGCAATTGTaGGGTATTTTAAATGCACAT +
Preference number: 5 (lower is better)
Translates to: VSCFRELLLIQHSWSHKITPLQL*GILNAH
Trigger: ATGTGCATTTAAAATACCCAACAATTGCAGCGGTGT...TATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCTGAAACACGAAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CAA 90 bp GAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTATTTATACACCGCTGCAATTGTaGGGTATTTTAAATGCACAT +
Preference number: 5 (lower is better)
Translates to: ENNGSSARQMLNLTVCIYTPLQL*GILNAH
Trigger: ATGTGCATTTAAAATACCCAACAATTGCAGCGGTGT...ATAAATACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CAA 90 bp AGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATACAAATGCTTCTGTGTATGATTGAGAATTaGACCTCTTCTCTCGACCAA +
Preference number: 5 (lower is better)
Translates to: RELLLIQHSWSHKIQMLLCMIEN*TSSLDQ
Trigger: TTGGTCGAGAGAAGAGGTCAAATTCTCAATCATACA...CAGAAGCATTTGTATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CAA 90 bp TCGTGTTTCAGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATACAATCTTGTCAAGGTGAATaGGTCGTCCAATGTATGATT +
Preference number: 5 (lower is better)
Translates to: SCFRELLLIQHSWSHKIQSCQGE*VVQCMI
Trigger: AATCATACATTGGACGACCAATTCACCTTGACAAGA...TTGTATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCTGAAACACGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CAA 90 bp AGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATACAAATGCTTCTGTCTTGTCAAGGTGAATaGGTCGTCCAATGTATGATT +
Preference number: 5 (lower is better)
Translates to: RELLLIQHSWSHKIQMLLSCQGE*VVQCMI
Trigger: AATCATACATTGGACGACCAATTCACCTTGACAAGA...CAGAAGCATTTGTATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CAA 90 bp ACACCAAACAGAACTACTTCACAGATACATTCTGTCTCTTACCAAAATGAAGCTGCTGGCTTTCTTGTTTaGTTGGAAATCGTAATTTGT +
Preference number: 5 (lower is better)
Translates to: TPNRTTSQIHSVSYQNEAAGFLV*LEIVIC
Trigger: ACAAATTACGATTTCCAACAAAACAAGAAAGCCAGC...AGCTTCATTTTGGTAAGAGACAGAATGTATCTGTGAAGTAGTTCTGTTTGGTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR CAA 90 bp ACACACCAAACAGAACTACTTCACAGATACATTCTGTCTCTTACCAAAATGAAGACTTGCAGCAAATTGTaGATAAGATCAATGGCTTCA +
Preference number: 5 (lower is better)
Translates to: THQTELLHRYILSLTKMKTCSKL*IRSMAS
Trigger: TGAAGCCATTGATCTTATCAACAATTTGCTGCAAGT...CTTCATTTTGGTAAGAGACAGAATGTATCTGTGAAGTAGTTCTGTTTGGTGTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR CAA 90 bp ATTTTCTCCCACATAATACACTACATTTGCCGTAGTGATTTCGAAACAATGAGGACTTGCAGCAAATTGTaGATAAGATCAATGGCTTCA +
Preference number: 5 (lower is better)
Translates to: IFSHIIHYICRSDFETMRTCSKL*IRSMAS
Trigger: TGAAGCCATTGATCTTATCAACAATTTGCTGCAAGT...CCTCATTGTTTCGAAATCACTACGGCAAATGTAGTGTATTATGTGGGAGAAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CAA 90 bp TCGTGTTTCAGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATACAAGCTAGGTGCATTGTCTaGAGTTTAAATATACTGAGG +
Preference number: 5 (lower is better)
Translates to: SCFRELLLIQHSWSHKIQARCIV*SLNILR
Trigger: CCTCAGTATATTTAAACTCAAGACAATGCACCTAGC...TTGTATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCTGAAACACGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR CAA 90 bp GTTTCGTGTTTCAGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATAGCTAGGTGCATTGTCTaGAGTTTAAATATACTGAGG +
Preference number: 5 (lower is better)
Translates to: VSCFRELLLIQHSWSHKIARCIV*SLNILR
Trigger: CCTCAGTATATTTAAACTCAAGACAATGCACCTAGC...TATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCTGAAACACGAAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000616995.4
ENST00000651571.1
CDS-3UTR CAA 90 bp GAAAATAATGGCAGTTCTGCAAGGCAAATGTTAAACCTGACCGTATGTATTTATGCTGGCTTTCTTGTTTaGTTGGAAATCGTAATTTGT +
Preference number: 5 (lower is better)
Translates to: ENNGSSARQMLNLTVCIYAGFLV*LEIVIC
Trigger: ACAAATTACGATTTCCAACAAAACAAGAAAGCCAGC...ATAAATACATACGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CAA 90 bp TCGTGTTTCAGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATACAAACTTGCAGCAAATTGTaGATAAGATCAATGGCTTCA +
Preference number: 5 (lower is better)
Translates to: SCFRELLLIQHSWSHKIQTCSKL*IRSMAS
Trigger: TGAAGCCATTGATCTTATCAACAATTTGCTGCAAGT...TTGTATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCTGAAACACGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS-3UTR CAA 90 bp TCGTGTTTCAGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATACAATGTTTCAGGGAACTTTaGTTAATACAACACAGTTGG +
Preference number: 5 (lower is better)
Translates to: SCFRELLLIQHSWSHKIQCFREL*LIQHSW
Trigger: CCAACTGTGTTGTATTAACAAAAGTTCCCTGAAACA...TTGTATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCTGAAACACGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS GCA 72 bp TGCAGCAGCAGCACCGGCTCACGGCTCAGGCCGATCTaGAGATGGAACGAGATGCCCCCGACCGGGGCCGCG +
Preference number: 6 (lower is better)
Translates to: CSSSTGSRLRPI*RWNEMPPTGAA
Trigger: CGCGGCCCCGGTCGGGGGCATCTCGTTCCATCTGCAGATCGGCCTGAGCCGTGAGCCGGTGCTGCTGCTGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
CDS GCA 72 bp GCTCACGGCTCAGGCCGATCTGCAGATGGAACGAGATaGCCCCGACCGGGGCCGCGACAGGAGCCAAGAACG +
Preference number: 6 (lower is better)
Translates to: AHGSGRSADGTR*PRPGPRQEPRT
Trigger: CGTTCTTGGCTCCTGTCGCGGCCCCGGTCGGGGGCATCTCGTTCCATCTGCAGATCGGCCTGAGCCGTGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000616995.4
CDS CCA 72 bp GAGGGCCTATCCCCTTCAGGGCTGAAGCTCTCCCATTaGCACCAAGTTTCCCAGGTCTCCTCTGTCCCGGGG +
Preference number: 6 (lower is better)
Translates to: EGLSPSGLKLSH*HQVSQVSSVPG
Trigger: CCCCGGGACAGAGGAGACCTGGGAAACTTGGTGCCAATGGGAGAGCTTCAGCCCTGAAGGGGATAGGCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551644.5
CDS CAA 72 bp GGAGGGCCTATCCCCTTCAGGGCTGAAGCTCTCCCATaGGCACCAAGTTTCCCAGGTCTCCTCTGTCCCGGG +
Preference number: 6 (lower is better)
Translates to: GGPIPFRAEALP*APSFPGLLCPG
Trigger: CCCGGGACAGAGGAGACCTGGGAAACTTGGTGCCAATGGGAGAGCTTCAGCCCTGAAGGGGATAGGCCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551644.5
CDS TCA 72 bp GCACCGGGACATGGGAGGGCCTATCCCCTTCAGGGCTaGAGCTCTCCCATTGGCACCAAGTTTCCCAGGTCT +
Preference number: 6 (lower is better)
Translates to: APGHGRAYPLQG*SSPIGTKFPRS
Trigger: AGACCTGGGAAACTTGGTGCCAATGGGAGAGCTTCAGCCCTGAAGGGGATAGGCCCTCCCATGTCCCGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551644.5
CDS CAA 90 bp TGCAGTGCTCCTGATGCCATCCAGGAATCCCCTTTACTGGTTCCGTaGCACTGTCTGGAAGGGCACCGGGACATGGGAGGGCCTATCCCC +
Preference number: 6 (lower is better)
Translates to: CSAPDAIQESPLLVP*HCLEGHRDMGGPIP
Trigger: GGGGATAGGCCCTCCCATGTCCCGGTGCCCTTCCAGACAGTGCAACGGAACCAGTAAAGGGGATTCCTGGATGGCATCAGGAGCACTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551644.5
CDS GCA 72 bp CTGATGCCATCCAGGAATCCCCTTTACTGGTTCCGTTaGACTGTCTGGAAGGGCACCGGGACATGGGAGGGC +
Preference number: 6 (lower is better)
Translates to: LMPSRNPLYWFR*TVWKGTGTWEG
Trigger: GCCCTCCCATGTCCCGGTGCCCTTCCAGACAGTGCAACGGAACCAGTAAAGGGGATTCCTGGATGGCATCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551644.5
CDS CCA 72 bp TCCAGGAATCCCCTTTACTGGTTCCGTTGCACTGTCTaGAAGGGCACCGGGACATGGGAGGGCCTATCCCCT +
Preference number: 6 (lower is better)
Translates to: SRNPLYWFRCTV*KGTGTWEGLSP
Trigger: AGGGGATAGGCCCTCCCATGTCCCGGTGCCCTTCCAGACAGTGCAACGGAACCAGTAAAGGGGATTCCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551644.5
CDS CAA 72 bp CCTGATGCCATCCAGGAATCCCCTTTACTGGTTCCGTaGCACTGTCTGGAAGGGCACCGGGACATGGGAGGG +
Preference number: 6 (lower is better)
Translates to: PDAIQESPLLVP*HCLEGHRDMGG
Trigger: CCCTCCCATGTCCCGGTGCCCTTCCAGACAGTGCAACGGAACCAGTAAAGGGGATTCCTGGATGGCATCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551644.5
CDS CCA 72 bp GCAGTGCTCCTGATGCCATCCAGGAATCCCCTTTACTaGTTCCGTTGCACTGTCTGGAAGGGCACCGGGACA +
Preference number: 6 (lower is better)
Translates to: AVLLMPSRNPLY*FRCTVWKGTGT
Trigger: TGTCCCGGTGCCCTTCCAGACAGTGCAACGGAACCAGTAAAGGGGATTCCTGGATGGCATCAGGAGCACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551644.5
CDS CCA 72 bp CGTAGAAACCACATTCAGGGAACTTCTGGTCGACAATaGAGCAAGCCATCTCGCGGACGTGCGCCAGGCTGT +
Preference number: 6 (lower is better)
Translates to: RRNHIQGTSGRQ*SKPSRGRAPGC
Trigger: ACAGCCTGGCGCACGTCCGCGAGATGGCTTGCTCCATTGTCGACCAGAAGTTCCCTGAATGTGGTTTCTACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331968.11
ENST00000415220.6
CDS CAA 72 bp GGGCTGGTTAGAAAACTGGCAGACTCACTGTGCAAGTaGGTTCCTGTACCCACGGAGGAGCCCTTGGGAATG +
Preference number: 6 (lower is better)
Translates to: GLVRKLADSLCK*VPVPTEEPLGM
Trigger: CATTCCCAAGGGCTCCTCCGTGGGTACAGGAACCAACTTGCACAGTGAGTCTGCCAGTTTTCTAACCAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546371.1
CDS CCA 72 bp CGTAGAAACCACATTCAGGGAACTTTTGATCGACAATaGAGCAAGCCATCTCGCGGACGTGCGCCAGGCTGT +
Preference number: 6 (lower is better)
Translates to: RRNHIQGTFDRQ*SKPSRGRAPGC
Trigger: ACAGCCTGGCGCACGTCCGCGAGATGGCTTGCTCCATTGTCGATCAAAAGTTCCCTGAATGTGGTTTCTACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616995.4
CDS CAA 90 bp ATGAGCTTTGGGCTGGTTAGAAAACTGGCAGACTCACTGTGCAAGTaGGTTCCTGTACCCACGGAGGAGCCCTTGGGAATGACGGGCATA +
Preference number: 6 (lower is better)
Translates to: MSFGLVRKLADSLCK*VPVPTEEPLGMTGI
Trigger: TATGCCCGTCATTCCCAAGGGCTCCTCCGTGGGTACAGGAACCAACTTGCACAGTGAGTCTGCCAGTTTTCTAACCAGCCCAAAGCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546371.1
CDS TCA 72 bp TCGCCTTCCTGGATATCACTGGCCGCTTTCACCAGCTaGAGGATGTTTTCAGAGGTAGGGTCATGGCGAAAA +
Preference number: 6 (lower is better)
Translates to: SPSWISLAAFTS*RMFSEVGSWRK
Trigger: TTTTCGCCATGACCCTACCTCTGAAAACATCCTTCAGCTGGTGAAAGCGGCCAGTGATATCCAGGAAGGCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000331968.11
ENST00000415220.6
ENST00000549503.1
ENST00000616995.4
ENST00000651571.1
ENST00000651616.1
CDS TCA 72 bp AAGTTCCACATGGCTGGGGAGGGCTCAGAATCATGGTaGGAGGTGAAAGGCACTTCTTACATCATGGCAGCA +
Preference number: 6 (lower is better)
Translates to: KFHMAGEGSESW*EVKGTSYIMAA
Trigger: TGCTGCCATGATGTAAGAAGTGCCTTTCACCTCTCACCATGATTCTGAGCCCTCCCCAGCCATGTGGAACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549503.1
CDS TCA 72 bp GATTTTTGCACGGTTCAGATGTCTGTGCAGTGCTCCTaGTGCCATCCAGGAATCCCCTTTACTGGTTCCGTT +
Preference number: 6 (lower is better)
Translates to: DFCTVQMSVQCS*CHPGIPFTGSV
Trigger: AACGGAACCAGTAAAGGGGATTCCTGGATGGCATCAGGAGCACTGCACAGACATCTGAACCGTGCAAAAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551644.5
CDS GCA 72 bp ACTCTGATGGTGATTTTTGCACGGTTCAGATGTCTGTaGAGTGCTCCTGATGCCATCCAGGAATCCCCTTTA +
Preference number: 6 (lower is better)
Translates to: TLMVIFARFRCL*SAPDAIQESPL
Trigger: TAAAGGGGATTCCTGGATGGCATCAGGAGCACTGCACAGACATCTGAACCGTGCAAAAATCACCATCAGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551644.5
CDS TCA 72 bp ATCACCACACTCTCTAATATGGAAGAAGCACAGACATaGCAGCTGATCTTTTACCTACCTCCATTAATGGTC +
Preference number: 6 (lower is better)
Translates to: ITTLSNMEEAQT*QLIFYLPPLMV
Trigger: GACCATTAATGGAGGTAGGTAAAAGATCAGCTGTCATGTCTGTGCTTCTTCCATATTAGAGAGTGTGGTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468370.5
CDS CCA 72 bp AGTTGTTTTATAGGATCCATCTACACAATGAAGTTGTaGCAATCCCAGGATCTCACACAACTGACAAGACCA +
Preference number: 6 (lower is better)
Translates to: SCFIGSIYTMKL*QSQDLTQLTRP
Trigger: TGGTCTTGTCAGTTGTGTGAGATCCTGGGATTGCCACAACTTCATTGTGTAGATGGATCCTATAAAACAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651571.1
CDS CAA 90 bp CTTCAGTTTGCAGACCCAGCTATGGCTTTCAACTCCTTTCTCTGCTaGATTAATCCAACTTACTGTCTTACTTTTCCACTTGTATGGTCT +
Preference number: 6 (lower is better)
Translates to: LQFADPAMAFNSFLC*INPTYCLTFPLVWS
Trigger: AGACCATACAAGTGGAAAAGTAAGACAGTAAGTTGGATTAATCAAGCAGAGAAAGGAGTTGAAAGCCATAGCTGGGTCTGCAAACTGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549503.1
CDS GCA 72 bp TTTGCAGACCCAGCTATGGCTTTCAACTCCTTTCTCTaGTTGATTAATCCAACTTACTGTCTTACTTTTCCA +
Preference number: 6 (lower is better)
Translates to: FADPAMAFNSFL*LINPTYCLTFP
Trigger: TGGAAAAGTAAGACAGTAAGTTGGATTAATCAAGCAGAGAAAGGAGTTGAAAGCCATAGCTGGGTCTGCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549503.1
CDS CAA 72 bp AAAAGTTGTTTTATAGGATCCATCTACACAATGAAGTaGTGGCAATCCCAGGATCTCACACAACTGACAAGA +
Preference number: 6 (lower is better)
Translates to: KSCFIGSIYTMK*WQSQDLTQLTR
Trigger: TCTTGTCAGTTGTGTGAGATCCTGGGATTGCCACAACTTCATTGTGTAGATGGATCCTATAAAACAACTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651571.1