Pregenerated sensors for PRKACG (Homo sapiens)
Ensembl gene IDs: ENSG00000165059Ensembl transcript IDs: ENST00000377276.5
Found 44 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCTCTTTCCACACCGTGTCCCTTGATACAACAGCAAGACCTGGCCTaGATAGAGCTGAGAAACTCGTTTAAAACAGGCAGAAGGGGGCTG | + |
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Preference number: 1 (lower is better) Translates to: PLSTPCPLIQQQDLA*IELRNSFKTGRRGL Trigger: CAGCCCCCTTCTGCCTGTTTTAAACGAGTTTCTCAGCTCTATTCAGGCCAGGTCTTGCTGTTGTATCAAGGGACACGGTGTGGAAAGAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000377276.5 |
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| 3UTR GCA 90 bp | CCAAAGGGTAGGTGTGCTTTTCATTCATCCTCTCTTAGTAAGTGGTaGCTGTTCAGGGCTGGAGTTAAGTTTGAGCCCCTCTTTCCACAC | + |
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Preference number: 1 (lower is better) Translates to: PKGRCAFHSSSLSKW*LFRAGVKFEPLFPH Trigger: GTGTGGAAAGAGGGGCTCAAACTTAACTCCAGCCCTGAACAGGCACCACTTACTAAGAGAGGATGAATGAAAAGCACACCTACCCTTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377276.5 |
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| 3UTR CCA 90 bp | ACGCCAAAGGGTAGGTGTGCTTTTCATTCATCCTCTCTTAGTAAGTaGTGCCTGTTCAGGGCTGGAGTTAAGTTTGAGCCCCTCTTTCCA | + |
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Preference number: 1 (lower is better) Translates to: TPKGRCAFHSSSLSK*CLFRAGVKFEPLFP Trigger: TGGAAAGAGGGGCTCAAACTTAACTCCAGCCCTGAACAGGCACCACTTACTAAGAGAGGATGAATGAAAAGCACACCTACCCTTTGGCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377276.5 |
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| 3UTR-3UTR TCA 90 bp | CCTCTCTTAGTAAGTGGTGCCTGTTCAGGGCTGGAGTTAAGTTTGAGCCCCTCTCCACACCGTGTCCCTTaGTACAACAGCAAGACCTGG | + |
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Preference number: 2 (lower is better) Translates to: PLLVSGACSGLELSLSPSPHRVP*YNSKTW Trigger: CCAGGTCTTGCTGTTGTATCAAGGGACACGGTGTGG...AGAGGGGCTCAAACTTAACTCCAGCCCTGAACAGGCACCACTTACTAAGAGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377276.5 |
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| 3UTR GCA 72 bp | AGGTGTGCTTTTCATTCATCCTCTCTTAGTAAGTGGTaGCTGTTCAGGGCTGGAGTTAAGTTTGAGCCCCTC | + |
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Preference number: 3 (lower is better) Translates to: RCAFHSSSLSKW*LFRAGVKFEPL Trigger: GAGGGGCTCAAACTTAACTCCAGCCCTGAACAGGCACCACTTACTAAGAGAGGATGAATGAAAAGCACACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377276.5 |
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| 3UTR TCA 72 bp | ACACCGTGTCCCTTGATACAACAGCAAGACCTGGCCTaGATAGAGCTGAGAAACTCGTTTAAAACAGGCAGA | + |
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Preference number: 3 (lower is better) Translates to: TPCPLIQQQDLA*IELRNSFKTGR Trigger: TCTGCCTGTTTTAAACGAGTTTCTCAGCTCTATTCAGGCCAGGTCTTGCTGTTGTATCAAGGGACACGGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377276.5 |
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| CDS-3UTR GCA 90 bp | GTAGGTGTGCTTTTCATTCATCCTCTCTTAGTAAGTGGTGCCTGTTCAGGGCTGTCTTGGCGGGGGCGTTaGCCATGGCGGTGGCGGCGG | + |
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Preference number: 4 (lower is better) Translates to: VGVLFIHPLLVSGACSGLSWRGR*PWRWRR Trigger: CCGCCGCCACCGCCATGGGCAACGCCCCCGCCAAGA...CAGCCCTGAACAGGCACCACTTACTAAGAGAGGATGAATGAAAAGCACACCTAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000377276.5 |
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| CDS-3UTR TCA 90 bp | CCTCTCTTAGTAAGTGGTGCCTGTTCAGGGCTGGAGTTAAGTTTGAGCCCCTCTTCAGGTCGCGGTGGATaGGGTCGAGCGAGTGTAGGT | + |
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Preference number: 4 (lower is better) Translates to: PLLVSGACSGLELSLSPSSGRGG*GRASVG Trigger: ACCTACACTCGCTCGACCTCATCCACCGCGACCTGA...AGAGGGGCTCAAACTTAACTCCAGCCCTGAACAGGCACCACTTACTAAGAGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377276.5 |
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| CDS-3UTR TCA 90 bp | TTAGTAAGTGGTGCCTGTTCAGGGCTGGAGTTAAGTTTGAGCCCCTCTTTCCACTTCCGAAGCGCTTGGTaGGGTCCACCTGCAGCAGGC | + |
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Preference number: 4 (lower is better) Translates to: LVSGACSGLELSLSPSFHFRSAW*GPPAAG Trigger: GCCTGCTGCAGGTGGACCTCACCAAGCGCTTCGGAA...GTGGAAAGAGGGGCTCAAACTTAACTCCAGCCCTGAACAGGCACCACTTACTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377276.5 |
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| CDS-3UTR CCA 90 bp | AGTAAGTGGTGCCTGTTCAGGGCTGGAGTTAAGTTTGAGCCCCTCTTTCCACACAGCGAGTGTAGGTACTaGACGGCCAGGACGACCTGG | + |
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Preference number: 4 (lower is better) Translates to: SKWCLFRAGVKFEPLFPHSECRY*TARTTW Trigger: CCAGGTCGTCCTGGCCGTCCAGTACCTACACTCGCT...GTGTGGAAAGAGGGGCTCAAACTTAACTCCAGCCCTGAACAGGCACCACTTACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377276.5 |
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| CDS-3UTR CCA 90 bp | CTGGAGTTAAGTTTGAGCCCCTCTTTCCACACCGTGTCCCTTGATACAACAGCAGTCGGCGTAGAAGGGTaGGAAGCCCACGGCCATCTC | + |
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Preference number: 4 (lower is better) Translates to: LELSLSPSFHTVSLDTTAVGVEG*EAHGHL Trigger: GAGATGGCCGTGGGCTTCCCACCCTTCTACGCCGAC...TGCTGTTGTATCAAGGGACACGGTGTGGAAAGAGGGGCTCAAACTTAACTCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377276.5 |
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| CDS-3UTR TCA 90 bp | CCTCTCTTAGTAAGTGGTGCCTGTTCAGGGCTGGAGTTAAGTTTGAGCCCCTCTCTGAGCCGTTCGAACTaGTCCGAGCTGGCGGTGTTT | + |
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Preference number: 4 (lower is better) Translates to: PLLVSGACSGLELSLSPSLSRSN*SELAVF Trigger: AAACACCGCCAGCTCGGATCAGTTCGAACGGCTCAG...AGAGGGGCTCAAACTTAACTCCAGCCCTGAACAGGCACCACTTACTAAGAGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377276.5 |
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| CDS-3UTR CCA 90 bp | CAGGCAGGATTACGCCAAAGGGTAGGTGTGCTTTTCATTCATCCTCTCTTAGTAGCTCGGTGTCCTTCTTaGCGGGGGCGTTGCCCATGG | + |
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Preference number: 4 (lower is better) Translates to: QAGLRQRVGVLFIHPLLVARCPS*RGRCPW Trigger: CCATGGGCAACGCCCCCGCCAAGAAGGACACCGAGC...TACTAAGAGAGGATGAATGAAAAGCACACCTACCCTTTGGCGTAATCCTGCCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000377276.5 |
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| CDS-3UTR TCA 90 bp | GGCAGGATTACGCCAAAGGGTAGGTGTGCTTTTCATTCATCCTCTCTTAGTAAGCCATGCCCAGCGTCCTaGGCCGTTCGAACTGATCCG | + |
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Preference number: 4 (lower is better) Translates to: GRITPKGRCAFHSSSLSKPCPAS*AVRTDP Trigger: CGGATCAGTTCGAACGGCTCAGGACGCTGGGCATGG...CTTACTAAGAGAGGATGAATGAAAAGCACACCTACCCTTTGGCGTAATCCTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377276.5 |
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| CDS-3UTR TCA 90 bp | CCTCTCTTAGTAAGTGGTGCCTGTTCAGGGCTGGAGTTAAGTTTGAGCCCCTCTACCACTTGTGGTTCTTaGTGTCGCCAACCCCGTTCC | + |
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Preference number: 4 (lower is better) Translates to: PLLVSGACSGLELSLSPSTTCGS*CRQPRS Trigger: GGAACGGGGTTGGCGACATCAAGAACCACAAGTGGT...AGAGGGGCTCAAACTTAACTCCAGCCCTGAACAGGCACCACTTACTAAGAGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377276.5 |
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| CDS-3UTR TCA 90 bp | ATTACGCCAAAGGGTAGGTGTGCTTTTCATTCATCCTCTCTTAGTAAGTGGTGCCGCCAACCCCGTTCCTaGGGTTTCCGAAGCGCTTGG | + |
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Preference number: 4 (lower is better) Translates to: ITPKGRCAFHSSSLSKWCRQPRS*GFRSAW Trigger: CCAAGCGCTTCGGAAACCTCAGGAACGGGGTTGGCG...GCACCACTTACTAAGAGAGGATGAATGAAAAGCACACCTACCCTTTGGCGTAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377276.5 |
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| CDS-3UTR GCA 90 bp | GTAGGTGTGCTTTTCATTCATCCTCTCTTAGTAAGTGGTGCCTGTTCAGGGCTGTTCACGCTCTCCTCCTaGTCGGTGTCCTTCTTGGCG | + |
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Preference number: 4 (lower is better) Translates to: VGVLFIHPLLVSGACSGLFTLSS*SVSFLA Trigger: CGCCAAGAAGGACACCGAGCAGGAGGAGAGCGTGAA...CAGCCCTGAACAGGCACCACTTACTAAGAGAGGATGAATGAAAAGCACACCTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377276.5 |
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| CDS-3UTR GCA 90 bp | CACACCGTGTCCCTTGATACAACAGCAAGACCTGGCCTGAATAGAGCTGAGAAAGGAAAGTCGATCGCCTaGAGGATGCGCTTCTCGTTC | + |
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Preference number: 4 (lower is better) Translates to: HTVSLDTTARPGLNRAEKGKSIA*RMRFSF Trigger: GAACGAGAAGCGCATCCTGCAGGCGATCGACTTTCC...TTTCTCAGCTCTATTCAGGCCAGGTCTTGCTGTTGTATCAAGGGACACGGTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377276.5 |
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| CDS-3UTR CCA 90 bp | CCTCTCTTAGTAAGTGGTGCCTGTTCAGGGCTGGAGTTAAGTTTGAGCCCCTCTGTGGCGAACCACTTGTaGTTCTTGATGTCGCCAACC | + |
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Preference number: 4 (lower is better) Translates to: PLLVSGACSGLELSLSPSVANHL*FLMSPT Trigger: GGTTGGCGACATCAAGAACCACAAGTGGTTCGCCAC...AGAGGGGCTCAAACTTAACTCCAGCCCTGAACAGGCACCACTTACTAAGAGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377276.5 |
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| CDS-3UTR CCA 90 bp | CAGGCAGGATTACGCCAAAGGGTAGGTGTGCTTTTCATTCATCCTCTCTTAGTACGAACTGATCCGAGCTaGCGGTGTTTTGAGCGGGGT | + |
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Preference number: 4 (lower is better) Translates to: QAGLRQRVGVLFIHPLLVRTDPS*RCFERG Trigger: ACCCCGCTCAAAACACCGCCAGCTCGGATCAGTTCG...TACTAAGAGAGGATGAATGAAAAGCACACCTACCCTTTGGCGTAATCCTGCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000377276.5 |
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| CDS-3UTR TCA 90 bp | TCTCTTAGTAAGTGGTGCCTGTTCAGGGCTGGAGTTAAGTTTGAGCCCCTCTTTCTGTGTACTTCGGGATaGAGGGAGCTTCCACCTTCT | + |
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Preference number: 4 (lower is better) Translates to: SLSKWCLFRAGVKFEPLFLCTSG*RELPPS Trigger: AGAAGGTGGAAGCTCCCTTCATCCCGAAGTACACAG...AAAGAGGGGCTCAAACTTAACTCCAGCCCTGAACAGGCACCACTTACTAAGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377276.5 |
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| CDS-3UTR TCA 90 bp | GGCAGGATTACGCCAAAGGGTAGGTGTGCTTTTCATTCATCCTCTCTTAGTAAGCCACACCGTGTCCCTTaGTACAACAGCAAGACCTGG | + |
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Preference number: 4 (lower is better) Translates to: GRITPKGRCAFHSSSLSKPHRVP*YNSKTW Trigger: CCAGGTCTTGCTGTTGTATCAAGGGACACGGTGTGG...CTTACTAAGAGAGGATGAATGAAAAGCACACCTACCCTTTGGCGTAATCCTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377276.5 |
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| CDS-3UTR GCA 90 bp | TCTCTTAGTAAGTGGTGCCTGTTCAGGGCTGGAGTTAAGTTTGAGCCCCTCTTTCGATCGCCTGCAGGATaGGCTTCTCGTTCAGTATGT | + |
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Preference number: 4 (lower is better) Translates to: SLSKWCLFRAGVKFEPLFRSPAG*ASRSVC Trigger: ACATACTGAACGAGAAGCGCATCCTGCAGGCGATCG...AAAGAGGGGCTCAAACTTAACTCCAGCCCTGAACAGGCACCACTTACTAAGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377276.5 |
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| CDS-3UTR GCA 90 bp | CTGGAGTTAAGTTTGAGCCCCTCTTTCCACACCGTGTCCCTTGATACAACAGCAAGTATGTGCTCGACCTaGTTCATCTTCACCACCTTC | + |
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Preference number: 4 (lower is better) Translates to: LELSLSPSFHTVSLDTTASMCST*FIFTTF Trigger: GAAGGTGGTGAAGATGAAGCAGGTCGAGCACATACT...TGCTGTTGTATCAAGGGACACGGTGTGGAAAGAGGGGCTCAAACTTAACTCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377276.5 |
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| CDS-3UTR GCA 90 bp | AGTAAGTGGTGCCTGTTCAGGGCTGGAGTTAAGTTTGAGCCCCTCTTTCCACACTTCTCGTTCAGTATGTaGTCGACCTGCTTCATCTTC | + |
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Preference number: 4 (lower is better) Translates to: SKWCLFRAGVKFEPLFPHFSFSM*STCFIF Trigger: GAAGATGAAGCAGGTCGAGCACATACTGAACGAGAA...GTGTGGAAAGAGGGGCTCAAACTTAACTCCAGCCCTGAACAGGCACCACTTACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377276.5 |
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| CDS-3UTR CCA 90 bp | TTACGCCAAAGGGTAGGTGTGCTTTTCATTCATCCTCTCTTAGTAAGTGGTGCCAGATGGCGATCCAGCTaGTTGTGGCGAACCACTTGT | + |
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Preference number: 4 (lower is better) Translates to: LRQRVGVLFIHPLLVSGARWRSS*LWRTTC Trigger: ACAAGTGGTTCGCCACAACCAGCTGGATCGCCATCT...GGCACCACTTACTAAGAGAGGATGAATGAAAAGCACACCTACCCTTTGGCGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377276.5 |
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| CDS-3UTR TCA 90 bp | CAAAGGGTAGGTGTGCTTTTCATTCATCCTCTCTTAGTAAGTGGTGCCTGTTCACAGCAAGACCTGGCCTaGATAGAGCTGAGAAACTCG | + |
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Preference number: 4 (lower is better) Translates to: QRVGVLFIHPLLVSGACSQQDLA*IELRNS Trigger: CGAGTTTCTCAGCTCTATTCAGGCCAGGTCTTGCTG...TGAACAGGCACCACTTACTAAGAGAGGATGAATGAAAAGCACACCTACCCTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377276.5 |
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| CDS-3UTR GCA 90 bp | CAGGCAGGATTACGCCAAAGGGTAGGTGTGCTTTTCATTCATCCTCTCTTAGTATCTCTTAGTAAGTGGTaGCTGTTCAGGGCTGGAGTT | + |
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Preference number: 4 (lower is better) Translates to: QAGLRQRVGVLFIHPLLVSLSKW*LFRAGV Trigger: AACTCCAGCCCTGAACAGGCACCACTTACTAAGAGA...TACTAAGAGAGGATGAATGAAAAGCACACCTACCCTTTGGCGTAATCCTGCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377276.5 |
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| CDS-3UTR CCA 90 bp | ATTACGCCAAAGGGTAGGTGTGCTTTTCATTCATCCTCTCTTAGTAAGTGGTGCAATCTCCTCTGGCTTTaGCTAGGAACTCGTTCACGC | + |
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Preference number: 4 (lower is better) Translates to: ITPKGRCAFHSSSLSKWCNLLWL*LGTRSR Trigger: GCGTGAACGAGTTCCTAGCCAAAGCCAGAGGAGATT...GCACCACTTACTAAGAGAGGATGAATGAAAAGCACACCTACCCTTTGGCGTAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377276.5 |
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| CDS-3UTR CCA 90 bp | TTACGCCAAAGGGTAGGTGTGCTTTTCATTCATCCTCTCTTAGTAAGTGGTGCCAGAGGAAATCTCCTCTaGCTTTGGCTAGGAACTCGT | + |
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Preference number: 4 (lower is better) Translates to: LRQRVGVLFIHPLLVSGARGNLL*LWLGTR Trigger: ACGAGTTCCTAGCCAAAGCCAGAGGAGATTTCCTCT...GGCACCACTTACTAAGAGAGGATGAATGAAAAGCACACCTACCCTTTGGCGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377276.5 |
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| CDS-3UTR CCA 90 bp | ATTACGCCAAAGGGTAGGTGTGCTTTTCATTCATCCTCTCTTAGTAAGTGGTGCCCTTCTTCTCATAGATaGCGATCCAGCTGGTTGTGG | + |
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Preference number: 4 (lower is better) Translates to: ITPKGRCAFHSSSLSKWCPSSHR*RSSWLW Trigger: CCACAACCAGCTGGATCGCCATCTATGAGAAGAAGG...GCACCACTTACTAAGAGAGGATGAATGAAAAGCACACCTACCCTTTGGCGTAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377276.5 |
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| CDS-3UTR CCA 90 bp | CAAAGGGTAGGTGTGCTTTTCATTCATCCTCTCTTAGTAAGTGGTGCCTGTTCATCCTCTCTTAGTAAGTaGTGCCTGTTCAGGGCTGGA | + |
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Preference number: 4 (lower is better) Translates to: QRVGVLFIHPLLVSGACSSSLSK*CLFRAG Trigger: TCCAGCCCTGAACAGGCACCACTTACTAAGAGAGGA...TGAACAGGCACCACTTACTAAGAGAGGATGAATGAAAAGCACACCTACCCTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377276.5 |
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| CDS-3UTR CAA 90 bp | ATTACGCCAAAGGGTAGGTGTGCTTTTCATTCATCCTCTCTTAGTAAGTGGTGCTTCTTGGCGGGGGCGTaGCCCATGGCGGTGGCGGCG | + |
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Preference number: 5 (lower is better) Translates to: ITPKGRCAFHSSSLSKWCFLAGA*PMAVAA Trigger: CGCCGCCACCGCCATGGGCAACGCCCCCGCCAAGAA...GCACCACTTACTAAGAGAGGATGAATGAAAAGCACACCTACCCTTTGGCGTAAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000377276.5 |
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| CDS CCA 90 bp | TTTGAGCGGGGTTTCCCCATCTGTAGAGGAAATCTCCTCTGGCTTTaGCTAGGAACTCGTTCACGCTCTCCTCCTGCTCGGTGTCCTTCT | + |
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Preference number: 5 (lower is better) Translates to: FERGFPICRGNLLWL*LGTRSRSPPARCPS Trigger: AGAAGGACACCGAGCAGGAGGAGAGCGTGAACGAGTTCCTAGCCAAAGCCAGAGGAGATTTCCTCTACAGATGGGGAAACCCCGCTCAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377276.5 |
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| CDS-3UTR CAA 90 bp | TTAGTAAGTGGTGCCTGTTCAGGGCTGGAGTTAAGTTTGAGCCCCTCTTTCCACAGGTTTCCGAAGCGCTaGGTGAGGTCCACCTGCAGC | + |
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Preference number: 5 (lower is better) Translates to: LVSGACSGLELSLSPSFHRFPKR*VRSTCS Trigger: GCTGCAGGTGGACCTCACCAAGCGCTTCGGAAACCT...GTGGAAAGAGGGGCTCAAACTTAACTCCAGCCCTGAACAGGCACCACTTACTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377276.5 |
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| CDS-3UTR CAA 90 bp | TCTCTTAGTAAGTGGTGCCTGTTCAGGGCTGGAGTTAAGTTTGAGCCCCTCTTTAGGTCAGAGCTGAGTTaGGAGGGAAACCGCACCCTC | + |
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Preference number: 5 (lower is better) Translates to: SLSKWCLFRAGVKFEPLFRSELS*EGNRTL Trigger: GAGGGTGCGGTTTCCCTCCAAACTCAGCTCTGACCT...AAAGAGGGGCTCAAACTTAACTCCAGCCCTGAACAGGCACCACTTACTAAGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377276.5 |
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| CDS-3UTR CAA 90 bp | CACACCGTGTCCCTTGATACAACAGCAAGACCTGGCCTGAATAGAGCTGAGAAAGGGCTGGAGTTAAGTTaGAGCCCCTCTTTCCACACC | + |
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Preference number: 5 (lower is better) Translates to: HTVSLDTTARPGLNRAEKGLELS*SPSFHT Trigger: GGTGTGGAAAGAGGGGCTCAAACTTAACTCCAGCCC...TTTCTCAGCTCTATTCAGGCCAGGTCTTGCTGTTGTATCAAGGGACACGGTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377276.5 |
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| CDS-3UTR CAA 90 bp | CAAAGGGTAGGTGTGCTTTTCATTCATCCTCTCTTAGTAAGTGGTGCCTGTTCACGAGCTGGCGGTGTTTaGAGCGGGGTTTCCCCATCT | + |
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Preference number: 5 (lower is better) Translates to: QRVGVLFIHPLLVSGACSRAGGV*SGVSPS Trigger: AGATGGGGAAACCCCGCTCAAAACACCGCCAGCTCG...TGAACAGGCACCACTTACTAAGAGAGGATGAATGAAAAGCACACCTACCCTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000377276.5 |
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| CDS-3UTR CAA 90 bp | CTGGAGTTAAGTTTGAGCCCCTCTTTCCACACCGTGTCCCTTGATACAACAGCATCCACACCGTGTCCCTaGATACAACAGCAAGACCTG | + |
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Preference number: 5 (lower is better) Translates to: LELSLSPSFHTVSLDTTASTPCP*IQQQDL Trigger: CAGGTCTTGCTGTTGTATCAAGGGACACGGTGTGGA...TGCTGTTGTATCAAGGGACACGGTGTGGAAAGAGGGGCTCAAACTTAACTCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377276.5 |
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| CDS-3UTR CAA 90 bp | ATTACGCCAAAGGGTAGGTGTGCTTTTCATTCATCCTCTCTTAGTAAGTGGTGCAAATCTCCTCTGGCTTaGGCTAGGAACTCGTTCACG | + |
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Preference number: 5 (lower is better) Translates to: ITPKGRCAFHSSSLSKWCKSPLA*ARNSFT Trigger: CGTGAACGAGTTCCTAGCCAAAGCCAGAGGAGATTT...GCACCACTTACTAAGAGAGGATGAATGAAAAGCACACCTACCCTTTGGCGTAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377276.5 |
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| CDS GCA 72 bp | CTGGCTTTGGCTAGGAACTCGTTCACGCTCTCCTCCTaGTCGGTGTCCTTCTTGGCGGGGGCGTTGCCCATG | + |
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Preference number: 6 (lower is better) Translates to: LALARNSFTLSS*SVSFLAGALPM Trigger: CATGGGCAACGCCCCCGCCAAGAAGGACACCGAGCAGGAGGAGAGCGTGAACGAGTTCCTAGCCAAAGCCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000377276.5 |
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| CDS CAA 90 bp | GCCCAGCGTCCTGAGCCGTTCGAACTGATCCGAGCTGGCGGTGTTTaGAGCGGGGTTTCCCCATCTGTAGAGGAAATCTCCTCTGGCTTT | + |
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Preference number: 6 (lower is better) Translates to: AQRPEPFELIRAGGV*SGVSPSVEEISSGF Trigger: AAAGCCAGAGGAGATTTCCTCTACAGATGGGGAAACCCCGCTCAAAACACCGCCAGCTCGGATCAGTTCGAACGGCTCAGGACGCTGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377276.5 |
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| CDS CAA 72 bp | CCTGAGCCGTTCGAACTGATCCGAGCTGGCGGTGTTTaGAGCGGGGTTTCCCCATCTGTAGAGGAAATCTCC | + |
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Preference number: 6 (lower is better) Translates to: PEPFELIRAGGV*SGVSPSVEEIS Trigger: GGAGATTTCCTCTACAGATGGGGAAACCCCGCTCAAAACACCGCCAGCTCGGATCAGTTCGAACGGCTCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377276.5 |
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| CDS CCA 72 bp | GGTTTCCCCATCTGTAGAGGAAATCTCCTCTGGCTTTaGCTAGGAACTCGTTCACGCTCTCCTCCTGCTCGG | + |
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Preference number: 6 (lower is better) Translates to: GFPICRGNLLWL*LGTRSRSPPAR Trigger: CCGAGCAGGAGGAGAGCGTGAACGAGTTCCTAGCCAAAGCCAGAGGAGATTTCCTCTACAGATGGGGAAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377276.5 |
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