Pregenerated sensors for PRDX1 (Homo sapiens)

Ensembl gene IDs: ENSG00000117450

Ensembl transcript IDs: ENST00000262746.5

Found 2 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	TGTGCGCAGCGCTCAAGCAGTCTCGGACTCCGGGCCTCCCCCGGCTaGCTCACGCATCACAGCACCCCCACCCGAGCGCGGGCGGGCCCC	+
Preference number: 5 (lower is better) Translates to: CAQRSSSLGLRASPG*LTHHSTPTRARAGP Trigger: GGGGCCCGCCCGCGCTCGGGTGGGGGTGCTGTGATGCGTGAGGCAGCCGGGGGAGGCCCGGAGTCCGAGACTGCTTGAGCGCTGCGCACA 76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000262746.5
CDS GCA 72 bp	CGCTCAAGCAGTCTCGGACTCCGGGCCTCCCCCGGCTaGCTCACGCATCACAGCACCCCCACCCGAGCGCGG	+
Preference number: 6 (lower is better) Translates to: RSSSLGLRASPG*LTHHSTPTRAR Trigger: CCGCGCTCGGGTGGGGGTGCTGTGATGCGTGAGGCAGCCGGGGGAGGCCCGGAGTCCGAGACTGCTTGAGCG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000262746.5

---

If you would like us to post a table for your organism of interest, or have questions, please reach out to eerik at stanford dot edu or xjgao at stanford.edu