RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PRDM6 (Homo sapiens)

Ensembl gene IDs: ENSG00000061455

Ensembl transcript IDs: ENST00000407847.5, ENST00000434521.1, ENST00000464424.1

Found 503 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGAAAGGGACTACACTGCCAACGCTTACCACTAATGAGGCAACTCTaGCCCATTCAGGGTCGCAGATCTCCTTCCCTGAGCAACTCCAGC +
Preference number: 1 (lower is better)
Translates to: GKGLHCQRLPLMRQL*PIQGRRSPSLSNSS
Trigger: GCTGGAGTTGCTCAGGGAAGGAGATCTGCGACCCTGAATGGGTCAGAGTTGCCTCATTAGTGGTAAGCGTTGGCAGTGTAGTCCCTTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR TCA 90 bp TGCATCAAGACCGGGCTGTTTGGAAGAAACCGTGTAAAAAGTGCATaGGCAGTGAGCATGGAAGACATGGAAATGGGATGCGTCTGGGGC +
Preference number: 1 (lower is better)
Translates to: CIKTGLFGRNRVKSA*AVSMEDMEMGCVWG
Trigger: GCCCCAGACGCATCCCATTTCCATGTCTTCCATGCTCACTGCTCATGCACTTTTTACACGGTTTCTTCCAAACAGCCCGGTCTTGATGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR CCA 90 bp CAGGCTGCTGGGTACACTCAGAGGGACCCGTTAACCCTGCTGTTCTaGAAATGCCCTCTTTGTGAGACGTGCCATGATTCCCATTTTAAA +
Preference number: 1 (lower is better)
Translates to: QAAGYTQRDPLTLLF*KCPLCETCHDSHFK
Trigger: TTTAAAATGGGAATCATGGCACGTCTCACAAAGAGGGCATTTCCAGAACAGCAGGGTTAACGGGTCCCTCTGAGTGTACCCAGCAGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR GCA 90 bp CTCCTGCATCAAGACCGGGCTGTTTGGAAGAAACCGTGTAAAAAGTaGATGAGCAGTGAGCATGGAAGACATGGAAATGGGATGCGTCTG +
Preference number: 1 (lower is better)
Translates to: LLHQDRAVWKKPCKK*MSSEHGRHGNGMRL
Trigger: CAGACGCATCCCATTTCCATGTCTTCCATGCTCACTGCTCATGCACTTTTTACACGGTTTCTTCCAAACAGCCCGGTCTTGATGCAGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR GCA 90 bp GCTGGGTACACTCAGAGGGACCCGTTAACCCTGCTGTTCTGGAAATaGCCTCTTTGTGAGACGTGCCATGATTCCCATTTTAAACAACTC +
Preference number: 1 (lower is better)
Translates to: AGYTQRDPLTLLFWK*PLCETCHDSHFKQL
Trigger: GAGTTGTTTAAAATGGGAATCATGGCACGTCTCACAAAGAGGGCATTTCCAGAACAGCAGGGTTAACGGGTCCCTCTGAGTGTACCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR GCA 90 bp CATAGCCTTAATATGAGAGCAATGAATTTGCTCCTAAACGCAGGCTaGTGGGTACACTCAGAGGGACCCGTTAACCCTGCTGTTCTGGAA +
Preference number: 1 (lower is better)
Translates to: HSLNMRAMNLLLNAG*WVHSEGPVNPAVLE
Trigger: TTCCAGAACAGCAGGGTTAACGGGTCCCTCTGAGTGTACCCAGCAGCCTGCGTTTAGGAGCAAATTCATTGCTCTCATATTAAGGCTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR CCA 90 bp AGCCTTAATATGAGAGCAATGAATTTGCTCCTAAACGCAGGCTGCTaGGTACACTCAGAGGGACCCGTTAACCCTGCTGTTCTGGAAATG +
Preference number: 1 (lower is better)
Translates to: SLNMRAMNLLLNAGC*VHSEGPVNPAVLEM
Trigger: CATTTCCAGAACAGCAGGGTTAACGGGTCCCTCTGAGTGTACCCAGCAGCCTGCGTTTAGGAGCAAATTCATTGCTCTCATATTAAGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR CCA 90 bp AAGATGCCAGTCACTGAACTCCGAGTGGAGCTGGCTTGTGGAAGTTaGGCTTGCCAGGACTCGCTGGTTTTTCACGTTGATTTGATTAAA +
Preference number: 1 (lower is better)
Translates to: KMPVTELRVELACGS*ACQDSLVFHVDLIK
Trigger: TTTAATCAAATCAACGTGAAAAACCAGCGAGTCCTGGCAAGCCCAACTTCCACAAGCCAGCTCCACTCGGAGTTCAGTGACTGGCATCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434521.1
3UTR CCA 90 bp AACCACAACCTTCTCCATGGTTCCTCCTCTCAAAGTCTCCTTGTCTaGGCTATTTTCACTTGTGTTTGTAGACATGCTCCTCCCACACTC +
Preference number: 1 (lower is better)
Translates to: NHNLLHGSSSQSLLV*AIFTCVCRHAPPTL
Trigger: GAGTGTGGGAGGAGCATGTCTACAAACACAAGTGAAAATAGCCCAGACAAGGAGACTTTGAGAGGAGGAACCATGGAGAAGGTTGTGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR TCA 90 bp AAAGCAATATTCTTTTCAGTTTGGCTCTGTCTGGCCAGTTGTACCTaGCAGCTGATCTCTGGGTTTGTAGAATGCAATCTTGGGGAGGGC +
Preference number: 1 (lower is better)
Translates to: KAIFFSVWLCLASCT*QLISGFVECNLGEG
Trigger: GCCCTCCCCAAGATTGCATTCTACAAACCCAGAGATCAGCTGTCAGGTACAACTGGCCAGACAGAGCCAAACTGAAAAGAATATTGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR TCA 90 bp GTGGAAGTTGGGCTTGCCAGGACTCGCTGGTTTTTCACGTTGATTTaGTTAAATCCTGATTCAATGGGCCCAGACTTATCCAGAAGAGAG +
Preference number: 1 (lower is better)
Translates to: VEVGLARTRWFFTLI*LNPDSMGPDLSRRE
Trigger: CTCTCTTCTGGATAAGTCTGGGCCCATTGAATCAGGATTTAATCAAATCAACGTGAAAAACCAGCGAGTCCTGGCAAGCCCAACTTCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434521.1
3UTR TCA 90 bp GCTTGCCAGGACTCGCTGGTTTTTCACGTTGATTTGATTAAATCCTaGTTCAATGGGCCCAGACTTATCCAGAAGAGAGAAGTTCCTGCT +
Preference number: 1 (lower is better)
Translates to: ACQDSLVFHVDLIKS*FNGPRLIQKREVPA
Trigger: AGCAGGAACTTCTCTCTTCTGGATAAGTCTGGGCCCATTGAATCAGGATTTAATCAAATCAACGTGAAAAACCAGCGAGTCCTGGCAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434521.1
3UTR CCA 90 bp AAGAGTGTTTTGGAGTACAGGTTACTGCCACATTCAGTGGAAGTTTaGGATCAGCTAGCAAAGCTATCAGGGTGGCAGAGAGATCATTGT +
Preference number: 1 (lower is better)
Translates to: KSVLEYRLLPHSVEV*DQLAKLSGWQRDHC
Trigger: ACAATGATCTCTCTGCCACCCTGATAGCTTTGCTAGCTGATCCCAAACTTCCACTGAATGTGGCAGTAACCTGTACTCCAAAACACTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR CCA 90 bp AGTCTACAAGTGCTGATTTTGTTAACATTAGACAATGCCCACATGTaGATCAACAGGGACTGTGGGTTGGCAGACTTTTGCTCTAAGATG +
Preference number: 1 (lower is better)
Translates to: SLQVLILLTLDNAHM*INRDCGLADFCSKM
Trigger: CATCTTAGAGCAAAAGTCTGCCAACCCACAGTCCCTGTTGATCCACATGTGGGCATTGTCTAATGTTAACAAAATCAGCACTTGTAGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR TCA 90 bp TCACAGTTTCATCTAGATTGTGCCCCAGAACTTGAACTGGTTCCTTaGGTACCTCATGCATGTAACTACACTATCTGTGCCTTTGACAAA +
Preference number: 1 (lower is better)
Translates to: SQFHLDCAPELELVP*VPHACNYTICAFDK
Trigger: TTTGTCAAAGGCACAGATAGTGTAGTTACATGCATGAGGTACTCAAGGAACCAGTTCAAGTTCTGGGGCACAATCTAGATGAAACTGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR GCA 90 bp GACCCGTTAACCCTGCTGTTCTGGAAATGCCCTCTTTGTGAGACGTaGCATGATTCCCATTTTAAACAACTCAATAGATACTTGCATTTT +
Preference number: 1 (lower is better)
Translates to: DPLTLLFWKCPLCET*HDSHFKQLNRYLHF
Trigger: AAAATGCAAGTATCTATTGAGTTGTTTAAAATGGGAATCATGGCACGTCTCACAAAGAGGGCATTTCCAGAACAGCAGGGTTAACGGGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR GCA 90 bp AGAGAAAGTAAGTCTACAAGTGCTGATTTTGTTAACATTAGACAATaGCCACATGTGGATCAACAGGGACTGTGGGTTGGCAGACTTTTG +
Preference number: 1 (lower is better)
Translates to: RESKSTSADFVNIRQ*PHVDQQGLWVGRLL
Trigger: CAAAAGTCTGCCAACCCACAGTCCCTGTTGATCCACATGTGGGCATTGTCTAATGTTAACAAAATCAGCACTTGTAGACTTACTTTCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR CCA 90 bp CTCAAGAAAAGACAAAGTAATCCTATTGATAAAATTAGCTGCTCCTaGGCTATCTGTTCTAACCACAACCTTCTCCATGGTTCCTCCTCT +
Preference number: 1 (lower is better)
Translates to: LKKRQSNPIDKISCS*AICSNHNLLHGSSS
Trigger: AGAGGAGGAACCATGGAGAAGGTTGTGGTTAGAACAGATAGCCCAGGAGCAGCTAATTTTATCAATAGGATTACTTTGTCTTTTCTTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR GCA 90 bp AATATGGCTACATTTCATTCACACTTCCCAGTGACGCACATTGTTTaGAAACGTATCCATCACTTAGGGCAGGGAATTGTAAAATCAGAA +
Preference number: 1 (lower is better)
Translates to: NMATFHSHFPVTHIV*KRIHHLGQGIVKSE
Trigger: TTCTGATTTTACAATTCCCTGCCCTAAGTGATGGATACGTTTGCAAACAATGTGCGTCACTGGGAAGTGTGAATGAAATGTAGCCATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR CCA 90 bp CAAAAGGCAGATGTGAAACTGGGCATTCACTCTAACCATTTTATTTaGTGGAAAGTTGGAGAGAGACATATTTCTATTCCAGTAGGGAAC +
Preference number: 1 (lower is better)
Translates to: QKADVKLGIHSNHFI*WKVGERHISIPVGN
Trigger: GTTCCCTACTGGAATAGAAATATGTCTCTCTCCAACTTTCCACCAAATAAAATGGTTAGAGTGAATGCCCAGTTTCACATCTGCCTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR TCA 90 bp AATCAGCTACTGTTATACAGCAGCATAGATTCCTTACTACTTTCATaGCCAGGAGATAGTAAGAACTGGAGGAAAATTCTAGGTGAATGG +
Preference number: 1 (lower is better)
Translates to: NQLLLYSSIDSLLLS*PGDSKNWRKILGEW
Trigger: CCATTCACCTAGAATTTTCCTCCAGTTCTTACTATCTCCTGGTCATGAAAGTAGTAAGGAATCTATGCTGCTGTATAACAGTAGCTGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR GCA 90 bp ATCAATCTCAAGAAAAGACAAAGTAATCCTATTGATAAAATTAGCTaGTCCTGGGCTATCTGTTCTAACCACAACCTTCTCCATGGTTCC +
Preference number: 1 (lower is better)
Translates to: INLKKRQSNPIDKIS*SWAICSNHNLLHGS
Trigger: GGAACCATGGAGAAGGTTGTGGTTAGAACAGATAGCCCAGGAGCAGCTAATTTTATCAATAGGATTACTTTGTCTTTTCTTGAGATTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR TCA 90 bp ACAAATGTTTCTCAACGAGCTGCTTCGGAACAATATAACGTATTATaGAGCTCCGTACATTTTACATGTTCTTGCAATCTTGACAGGACA +
Preference number: 1 (lower is better)
Translates to: TNVSQRAASEQYNVL*SSVHFTCSCNLDRT
Trigger: TGTCCTGTCAAGATTGCAAGAACATGTAAAATGTACGGAGCTTCATAATACGTTATATTGTTCCGAAGCAGCTCGTTGAGAAACATTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR-3UTR CCA 90 bp GGCCCCGGCAAAGGCACGACCACAGTAGCCGCACTTGAAAGGCCGGTCACTAGAACAACGGAGCGCTGCTaGGTGGTAGGGGCGAGTTTG +
Preference number: 2 (lower is better)
Translates to: GPGKGTTTVAALERPVTRTTERC*VVGASL
Trigger: CAAACTCGCCCCTACCACCCAGCAGCGCTCCGTTGT...TCTAGTGACCGGCCTTTCAAGTGCGGCTACTGTGGTCGTGCCTTTGCCGGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434521.1
3UTR-3UTR CCA 90 bp AGATGCCAGTCACTGAACTCCGAGTGGAGCTGGCTTGTGGAAGTTGGGCTTGCCCTGCTGCACGGAGTCTaGGGGAAAACAACGGAGCGC +
Preference number: 2 (lower is better)
Translates to: RCQSLNSEWSWLVEVGLALLHGV*GKTTER
Trigger: GCGCTCCGTTGTTTTCCCCCAGACTCCGTGCAGCAG...GGCAAGCCCAACTTCCACAAGCCAGCTCCACTCGGAGTTCAGTGACTGGCATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434521.1
3UTR CAA 90 bp CATGGAAGACATGGAAATGGGATGCGTCTGGGGCTGAAGGTAGCATaGACTCAGCGAAGGCTCTCACTCTGCTTCCGTGGTCCCCGCTGG +
Preference number: 2 (lower is better)
Translates to: HGRHGNGMRLGLKVA*TQRRLSLCFRGPRW
Trigger: CCAGCGGGGACCACGGAAGCAGAGTGAGAGCCTTCGCTGAGTCAATGCTACCTTCAGCCCCAGACGCATCCCATTTCCATGTCTTCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR-3UTR CCA 90 bp GGCACGACCACAGTAGCCGCACTTGAAAGGCCGGTCACTAGAGTGAGTGACCACAGTGGAGCTGGCTTGTaGAAGTTGGGCTTGCCAGGA +
Preference number: 2 (lower is better)
Translates to: GTTTVAALERPVTRVSDHSGAGL*KLGLPG
Trigger: TCCTGGCAAGCCCAACTTCCACAAGCCAGCTCCACT...GTGGTCACTCACTCTAGTGACCGGCCTTTCAAGTGCGGCTACTGTGGTCGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434521.1
3UTR-3UTR TCA 90 bp GGTGGTGGCCCCGGCAAAGGCACGACCACAGTAGCCGCACTTGAAAGGCCGGTCGATTTGATTAAATCCTaGTTCAATGGGCCCAGACTT +
Preference number: 2 (lower is better)
Translates to: GGGPGKGTTTVAALERPVDLIKS*FNGPRL
Trigger: AAGTCTGGGCCCATTGAATCAGGATTTAATCAAATC...GACCGGCCTTTCAAGTGCGGCTACTGTGGTCGTGCCTTTGCCGGGGCCACCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434521.1
3UTR-3UTR CCA 90 bp CGTAATGACTCCATTGATGCCTGGAAAGTAACTCACTTAGCATTCAGTCAGAACTTCCGTGGTCCCCGCTaGGGCAGCCAGTGTCAGGCC +
Preference number: 2 (lower is better)
Translates to: RNDSIDAWKVTHLAFSQNFRGPR*GSQCQA
Trigger: GGCCTGACACTGGCTGCCCCAGCGGGGACCACGGAA...GTTCTGACTGAATGCTAAGTGAGTTACTTTCCAGGCATCAATGGAGTCATTACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR-3UTR TCA 90 bp GACCCAAATGATCTCAGTACCTGCTTCAGGGTTCCAAGTCAATGTCCAGGTGTAACTGACACAGCAGAATaGAGGGCTGTACAGTGGGTC +
Preference number: 2 (lower is better)
Translates to: DPNDLSTCFRVPSQCPGVTDTAE*RAVQWV
Trigger: GACCCACTGTACAGCCCTTCATTCTGCTGTGTCAGT...TACACCTGGACATTGACTTGGAACCCTGAAGCAGGTACTGAGATCATTTGGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR-3UTR GCA 90 bp TGGGATATTGAGATTTTTCTAGAAATGCAAAGGTCTGCAGCTCCATCTCTCATCCGAAGGCTCTCACTCTaGTTCCGTGGTCCCCGCTGG +
Preference number: 2 (lower is better)
Translates to: WDIEIFLEMQRSAAPSLIRRLSL*FRGPRW
Trigger: CCAGCGGGGACCACGGAAGCAGAGTGAGAGCCTTCG...GATGAGAGATGGAGCTGCAGACCTTTGCATTTCTAGAAAAATCTCAATATCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR-3UTR GCA 90 bp TTAAATCCTGATTCAATGGGCCCAGACTTATCCAGAAGAGAGAAGTTCCTGCTGAAAACAACGGAGCGCTaGTGGGTGGTAGGGGCGAGT +
Preference number: 2 (lower is better)
Translates to: LNPDSMGPDLSRREKFLLKTTER*WVVGAS
Trigger: ACTCGCCCCTACCACCCAGCAGCGCTCCGTTGTTTT...CAGCAGGAACTTCTCTCTTCTGGATAAGTCTGGGCCCATTGAATCAGGATTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434521.1
3UTR-3UTR CCA 90 bp GACCCAAATGATCTCAGTACCTGCTTCAGGGTTCCAAGTCAATGTCCAGGTGTAACAGACAGCCTAGGCTaGTCTGCTAGAAGCTGGCAA +
Preference number: 2 (lower is better)
Translates to: DPNDLSTCFRVPSQCPGVTDSLG*SARSWQ
Trigger: TTGCCAGCTTCTAGCAGACCAGCCTAGGCTGTCTGT...TACACCTGGACATTGACTTGGAACCCTGAAGCAGGTACTGAGATCATTTGGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR CAA 90 bp AGTTTGGGATCAGCTAGCAAAGCTATCAGGGTGGCAGAGAGATCATaGTTAAGGAAAACCTTCCCATGCCAGACATCAAGGGAGGAGGGA +
Preference number: 2 (lower is better)
Translates to: SLGSASKAIRVAERS*LRKTFPCQTSREEG
Trigger: TCCCTCCTCCCTTGATGTCTGGCATGGGAAGGTTTTCCTTAACAATGATCTCTCTGCCACCCTGATAGCTTTGCTAGCTGATCCCAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR CAA 90 bp CTGGTTTCTGTAGGCATGCATAGCCTTAATATGAGAGCAATGAATTaGCTCCTAAACGCAGGCTGCTGGGTACACTCAGAGGGACCCGTT +
Preference number: 2 (lower is better)
Translates to: LVSVGMHSLNMRAMN*LLNAGCWVHSEGPV
Trigger: AACGGGTCCCTCTGAGTGTACCCAGCAGCCTGCGTTTAGGAGCAAATTCATTGCTCTCATATTAAGGCTATGCATGCCTACAGAAACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR-3UTR TCA 90 bp GCAATTTCTACCACCCATTTGCTGTATCCCAGGGGACTGTGTGTCCACTTTAAAAAGGTAGACAGTCGCTaGGATGCTGCTGGGAGCTAT +
Preference number: 2 (lower is better)
Translates to: AISTTHLLYPRGLCVHFKKVDSR*DAAGSY
Trigger: ATAGCTCCCAGCAGCATCTCAGCGACTGTCTACCTT...TTTAAAGTGGACACACAGTCCCCTGGGATACAGCAAATGGGTGGTAGAAATTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR-3UTR CCA 90 bp TTTTCACTTGTGTTTGTAGACATGCTCCTCCCACACTCAGGAGAGAGGAAAGGGTGGAAGACATGGAAATaGGATGCGTCTGGGGCTGAA +
Preference number: 2 (lower is better)
Translates to: FSLVFVDMLLPHSGERKGWKTWK*DASGAE
Trigger: TTCAGCCCCAGACGCATCCCATTTCCATGTCTTCCA...CCCTTTCCTCTCTCCTGAGTGTGGGAGGAGCATGTCTACAAACACAAGTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR-3UTR CCA 90 bp CGTAATGACTCCATTGATGCCTGGAAAGTAACTCACTTAGCATTCAGTCAGAACCTAAACGCAGGCTGCTaGGTACACTCAGAGGGACCC +
Preference number: 2 (lower is better)
Translates to: RNDSIDAWKVTHLAFSQNLNAGC*VHSEGP
Trigger: GGGTCCCTCTGAGTGTACCCAGCAGCCTGCGTTTAG...GTTCTGACTGAATGCTAAGTGAGTTACTTTCCAGGCATCAATGGAGTCATTACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR CAA 90 bp TTAACATTAGACAATGCCCACATGTGGATCAACAGGGACTGTGGGTaGGCAGACTTTTGCTCTAAGATGGCTGCTTTCCCCAACATGTGG +
Preference number: 2 (lower is better)
Translates to: LTLDNAHMWINRDCG*ADFCSKMAAFPNMW
Trigger: CCACATGTTGGGGAAAGCAGCCATCTTAGAGCAAAAGTCTGCCAACCCACAGTCCCTGTTGATCCACATGTGGGCATTGTCTAATGTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR-3UTR TCA 90 bp GCAATTTCTACCACCCATTTGCTGTATCCCAGGGGACTGTGTGTCCACTTTAAATTGCTAAAAGGGCCTTaGCGATGGGGTTTGGCACTA +
Preference number: 2 (lower is better)
Translates to: AISTTHLLYPRGLCVHFKLLKGP*RWGLAL
Trigger: TAGTGCCAAACCCCATCGTCAAGGCCCTTTTAGCAA...TTTAAAGTGGACACACAGTCCCCTGGGATACAGCAAATGGGTGGTAGAAATTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR CAA 90 bp GTTCTAACCACAACCTTCTCCATGGTTCCTCCTCTCAAAGTCTCCTaGTCTGGGCTATTTTCACTTGTGTTTGTAGACATGCTCCTCCCA +
Preference number: 2 (lower is better)
Translates to: VLTTTFSMVPPLKVS*SGLFSLVFVDMLLP
Trigger: TGGGAGGAGCATGTCTACAAACACAAGTGAAAATAGCCCAGACAAGGAGACTTTGAGAGGAGGAACCATGGAGAAGGTTGTGGTTAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR CAA 90 bp GAAGAGTGTTTTGGAGTACAGGTTACTGCCACATTCAGTGGAAGTTaGGGATCAGCTAGCAAAGCTATCAGGGTGGCAGAGAGATCATTG +
Preference number: 2 (lower is better)
Translates to: EECFGVQVTATFSGS*GSASKAIRVAERSL
Trigger: CAATGATCTCTCTGCCACCCTGATAGCTTTGCTAGCTGATCCCAAACTTCCACTGAATGTGGCAGTAACCTGTACTCCAAAACACTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR-3UTR TCA 90 bp GACCCAAATGATCTCAGTACCTGCTTCAGGGTTCCAAGTCAATGTCCAGGTGTAATTCACACTTCCCAGTaGCGCACATTGTTTGCAAAC +
Preference number: 2 (lower is better)
Translates to: DPNDLSTCFRVPSQCPGVIHTSQ*RTLFAN
Trigger: GTTTGCAAACAATGTGCGTCACTGGGAAGTGTGAAT...TACACCTGGACATTGACTTGGAACCCTGAAGCAGGTACTGAGATCATTTGGGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR-3UTR GCA 90 bp ATCATCATTCCCATCAACCTCTGTGGGAATAAGCGCAGAATGTCCTTATTTTTCCTCCTAAACGCAGGCTaGTGGGTACACTCAGAGGGA +
Preference number: 2 (lower is better)
Translates to: IIIPINLCGNKRRMSLFFLLNAG*WVHSEG
Trigger: TCCCTCTGAGTGTACCCAGCAGCCTGCGTTTAGGAG...GAAAAATAAGGACATTCTGCGCTTATTCCCACAGAGGTTGATGGGAATGATGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR-3UTR GCA 90 bp GAGCCAAACCCTGATTCAGCTCTGACAGACTACCTTTCTTATCTTAAATATCCTAGACAGTCGCTGAGATaGTGCTGGGAGCTATCAGCT +
Preference number: 2 (lower is better)
Translates to: EPNPDSALTDYLSYLKYPRQSLR*CWELSA
Trigger: AGCTGATAGCTCCCAGCAGCATCTCAGCGACTGTCT...AGGATATTTAAGATAAGAAAGGTAGTCTGTCAGAGCTGAATCAGGGTTTGGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR-3UTR CCA 90 bp GTTTTCCTTAATTCGTTAGTCATCACCTTAGCCTCTGCATTTAAACTGGGGGAAGTAAGCCTGTCTTTGTaGACAGACAGCCTAGGCTGG +
Preference number: 2 (lower is better)
Translates to: VFLNSLVITLASAFKLGEVSLSL*TDSLGW
Trigger: CCAGCCTAGGCTGTCTGTCCACAAAGACAGGCTTAC...TTCCCCCAGTTTAAATGCAGAGGCTAAGGTGATGACTAACGAATTAAGGAAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR-3UTR TCA 90 bp CGTAATGACTCCATTGATGCCTGGAAAGTAACTCACTTAGCATTCAGTCAGAACTCAAGAGCCAAACCCTaGTTCAGCTCTGACAGACTA +
Preference number: 2 (lower is better)
Translates to: RNDSIDAWKVTHLAFSQNSRAKP*FSSDRL
Trigger: TAGTCTGTCAGAGCTGAATCAGGGTTTGGCTCTTGA...GTTCTGACTGAATGCTAAGTGAGTTACTTTCCAGGCATCAATGGAGTCATTACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR-3UTR GCA 90 bp ATCATCATTCCCATCAACCTCTGTGGGAATAAGCGCAGAATGTCCTTATTTTTCAGGAAAACCTTCCCATaGCAGACATCAAGGGAGGAG +
Preference number: 2 (lower is better)
Translates to: IIIPINLCGNKRRMSLFFRKTFP*QTSREE
Trigger: CTCCTCCCTTGATGTCTGGCATGGGAAGGTTTTCCT...GAAAAATAAGGACATTCTGCGCTTATTCCCACAGAGGTTGATGGGAATGATGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR-3UTR GCA 90 bp GCAATTTCTACCACCCATTTGCTGTATCCCAGGGGACTGTGTGTCCACTTTAAATGGAGTACAGGTTACTaGCACATTCAGTGGAAGTTT +
Preference number: 2 (lower is better)
Translates to: AISTTHLLYPRGLCVHFKWSTGY*HIQWKF
Trigger: AAACTTCCACTGAATGTGGCAGTAACCTGTACTCCA...TTTAAAGTGGACACACAGTCCCCTGGGATACAGCAAATGGGTGGTAGAAATTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR-3UTR CCA 90 bp GAGAAAGTAAGTCTACAAGTGCTGATTTTGTTAACATTAGACAATGCCCACATGTCGCTGAGATGCTGCTaGGAGCTATCAGCTCTTCCC +
Preference number: 2 (lower is better)
Translates to: EKVSLQVLILLTLDNAHMSLRCC*ELSALP
Trigger: GGGAAGAGCTGATAGCTCCCAGCAGCATCTCAGCGA...CATGTGGGCATTGTCTAATGTTAACAAAATCAGCACTTGTAGACTTACTTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR-3UTR CCA 90 bp CGTAATGACTCCATTGATGCCTGGAAAGTAACTCACTTAGCATTCAGTCAGAACAACCTTATTCTCTTCTaGCCACCCTCCAACACAACC +
Preference number: 2 (lower is better)
Translates to: RNDSIDAWKVTHLAFSQNNLILF*PPSNTT
Trigger: GGTTGTGTTGGAGGGTGGCCAGAAGAGAATAAGGTT...GTTCTGACTGAATGCTAAGTGAGTTACTTTCCAGGCATCAATGGAGTCATTACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR CAA 90 bp ATTTTTCTAGAAATGCAAAGGTCTGCAGCTCCATCTCTCATCCTATaGCACCCTGACTTTTCCCTGGCATTACCTTTCGTCTTAGACTCT +
Preference number: 2 (lower is better)
Translates to: IFLEMQRSAAPSLIL*HPDFSLALPFVLDS
Trigger: AGAGTCTAAGACGAAAGGTAATGCCAGGGAAAAGTCAGGGTGCAATAGGATGAGAGATGGAGCTGCAGACCTTTGCATTTCTAGAAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR CAA 90 bp TGGTTCCTTGAGTACCTCATGCATGTAACTACACTATCTGTGCCTTaGACAAACCAAACCTATAATGACTCCAGTCTTTCTGCTGCACTG +
Preference number: 2 (lower is better)
Translates to: WFLEYLMHVTTLSVP*TNQTYNDSSLSAAL
Trigger: CAGTGCAGCAGAAAGACTGGAGTCATTATAGGTTTGGTTTGTCAAAGGCACAGATAGTGTAGTTACATGCATGAGGTACTCAAGGAACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR-3UTR TCA 90 bp GCAATTTCTACCACCCATTTGCTGTATCCCAGGGGACTGTGTGTCCACTTTAAATTTTCTGGGACTGATTaGAAGTTGCTCAGAGGAAAT +
Preference number: 2 (lower is better)
Translates to: AISTTHLLYPRGLCVHFKFSGTD*KLLRGN
Trigger: ATTTCCTCTGAGCAACTTTCAATCAGTCCCAGAAAA...TTTAAAGTGGACACACAGTCCCCTGGGATACAGCAAATGGGTGGTAGAAATTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR-3UTR TCA 90 bp TTTTCACTTGTGTTTGTAGACATGCTCCTCCCACACTCAGGAGAGAGGAAAGGGATGTTCTTGCAATCTTaGCAGGACAAAATAAGTCCT +
Preference number: 2 (lower is better)
Translates to: FSLVFVDMLLPHSGERKGMFLQS*QDKISP
Trigger: AGGACTTATTTTGTCCTGTCAAGATTGCAAGAACAT...CCCTTTCCTCTCTCCTGAGTGTGGGAGGAGCATGTCTACAAACACAAGTGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR-3UTR TCA 90 bp ATCATCATTCCCATCAACCTCTGTGGGAATAAGCGCAGAATGTCCTTATTTTTCAAAGTGCATGAGCAGTaGGCATGGAAGACATGGAAA +
Preference number: 2 (lower is better)
Translates to: IIIPINLCGNKRRMSLFFKVHEQ*AWKTWK
Trigger: TTTCCATGTCTTCCATGCTCACTGCTCATGCACTTT...GAAAAATAAGGACATTCTGCGCTTATTCCCACAGAGGTTGATGGGAATGATGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR-3UTR GCA 90 bp TGGGAGAAACTAGAGAAGTGTACTAGATTGTTCAGAGAAAGTAAGTCTACAAGTACAACCTGCCCTTCCTaGCTGTTGCCATTTGTCCTA +
Preference number: 2 (lower is better)
Translates to: WEKLEKCTRLFRESKSTSTTCPS*LLPFVL
Trigger: TAGGACAAATGGCAACAGGCAGGAAGGGCAGGTTGT...ACTTGTAGACTTACTTTCTCTGAACAATCTAGTACACTTCTCTAGTTTCTCCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR-3UTR TCA 90 bp TGGGAGAAACTAGAGAAGTGTACTAGATTGTTCAGAGAAAGTAAGTCTACAAGTATCTCTTTCCTGGTCTaGCTTCCATGCCAGGATCAA +
Preference number: 2 (lower is better)
Translates to: WEKLEKCTRLFRESKSTSISFLV*LPCQDQ
Trigger: TTGATCCTGGCATGGAAGTCAGACCAGGAAAGAGAT...ACTTGTAGACTTACTTTCTCTGAACAATCTAGTACACTTCTCTAGTTTCTCCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR-3UTR GCA 90 bp GTTTTCCTTAATTCGTTAGTCATCACCTTAGCCTCTGCATTTAAACTGGGGGAAAATGATCTCAGTACCTaGTTCAGGGTTCCAAGTCAA +
Preference number: 2 (lower is better)
Translates to: VFLNSLVITLASAFKLGENDLST*FRVPSQ
Trigger: TTGACTTGGAACCCTGAAGCAGGTACTGAGATCATT...TTCCCCCAGTTTAAATGCAGAGGCTAAGGTGATGACTAACGAATTAAGGAAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR-3UTR GCA 90 bp TGGGAGAAACTAGAGAAGTGTACTAGATTGTTCAGAGAAAGTAAGTCTACAAGTTTTCTACCACCCATTTaGTGTATCCCAGGGGACTGT +
Preference number: 2 (lower is better)
Translates to: WEKLEKCTRLFRESKSTSFLPPI*CIPGDC
Trigger: ACAGTCCCCTGGGATACAGCAAATGGGTGGTAGAAA...ACTTGTAGACTTACTTTCTCTGAACAATCTAGTACACTTCTCTAGTTTCTCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR-3UTR CCA 90 bp GTTTTCCTTAATTCGTTAGTCATCACCTTAGCCTCTGCATTTAAACTGGGGGAATTCCACTGTGAAATGTaGCAAATGGCTGAGCTGATT +
Preference number: 2 (lower is better)
Translates to: VFLNSLVITLASAFKLGEFHCEM*QMAELI
Trigger: AATCAGCTCAGCCATTTGCCACATTTCACAGTGGAA...TTCCCCCAGTTTAAATGCAGAGGCTAAGGTGATGACTAACGAATTAAGGAAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR-3UTR CCA 90 bp GAGAAAGTAAGTCTACAAGTGCTGATTTTGTTAACATTAGACAATGCCCACATGCCCCAGAACTTGAACTaGTTCCTTGAGTACCTCATG +
Preference number: 2 (lower is better)
Translates to: EKVSLQVLILLTLDNAHMPQNLN*FLEYLM
Trigger: CATGAGGTACTCAAGGAACCAGTTCAAGTTCTGGGG...CATGTGGGCATTGTCTAATGTTAACAAAATCAGCACTTGTAGACTTACTTTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR-3UTR TCA 90 bp TGGGAGAAACTAGAGAAGTGTACTAGATTGTTCAGAGAAAGTAAGTCTACAAGTTTGGTTTTCTGGGACTaGTTGAAAGTTGCTCAGAGG +
Preference number: 2 (lower is better)
Translates to: WEKLEKCTRLFRESKSTSLVFWD*LKVAQR
Trigger: CCTCTGAGCAACTTTCAATCAGTCCCAGAAAACCAA...ACTTGTAGACTTACTTTCTCTGAACAATCTAGTACACTTCTCTAGTTTCTCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR-3UTR GCA 90 bp GTTTTCCTTAATTCGTTAGTCATCACCTTAGCCTCTGCATTTAAACTGGGGGAAACCACACAGTATCCTTaGCTTTTAGTAGTGAGTTCA +
Preference number: 2 (lower is better)
Translates to: VFLNSLVITLASAFKLGETTQYP*LLVVSS
Trigger: TGAACTCACTACTAAAAGGCAAGGATACTGTGTGGT...TTCCCCCAGTTTAAATGCAGAGGCTAAGGTGATGACTAACGAATTAAGGAAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR-3UTR GCA 90 bp TGGGATATTGAGATTTTTCTAGAAATGCAAAGGTCTGCAGCTCCATCTCTCATCGTGACGCACATTGTTTaGAAACGTATCCATCACTTA +
Preference number: 2 (lower is better)
Translates to: WDIEIFLEMQRSAAPSLIVTHIV*KRIHHL
Trigger: TAAGTGATGGATACGTTTGCAAACAATGTGCGTCAC...GATGAGAGATGGAGCTGCAGACCTTTGCATTTCTAGAAAAATCTCAATATCCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR-3UTR CCA 90 bp GTTTTCCTTAATTCGTTAGTCATCACCTTAGCCTCTGCATTTAAACTGGGGGAACTTGACGATGGGGTTTaGCACTATTTTTGTTCACAT +
Preference number: 2 (lower is better)
Translates to: VFLNSLVITLASAFKLGELDDGV*HYFCSH
Trigger: ATGTGAACAAAAATAGTGCCAAACCCCATCGTCAAG...TTCCCCCAGTTTAAATGCAGAGGCTAAGGTGATGACTAACGAATTAAGGAAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR-3UTR CCA 90 bp GAGCCAAACCCTGATTCAGCTCTGACAGACTACCTTTCTTATCTTAAATATCCTCAAAGTCTCCTTGTCTaGGCTATTTTCACTTGTGTT +
Preference number: 2 (lower is better)
Translates to: EPNPDSALTDYLSYLKYPQSLLV*AIFTCV
Trigger: AACACAAGTGAAAATAGCCCAGACAAGGAGACTTTG...AGGATATTTAAGATAAGAAAGGTAGTCTGTCAGAGCTGAATCAGGGTTTGGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR CAA 90 bp AGTGTACTAGATTGTTCAGAGAAAGTAAGTCTACAAGTGCTGATTTaGTTAACATTAGACAATGCCCACATGTGGATCAACAGGGACTGT +
Preference number: 2 (lower is better)
Translates to: SVLDCSEKVSLQVLI*LTLDNAHMWINRDC
Trigger: ACAGTCCCTGTTGATCCACATGTGGGCATTGTCTAATGTTAACAAAATCAGCACTTGTAGACTTACTTTCTCTGAACAATCTAGTACACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR-3UTR TCA 90 bp TTCAGAGAAAGTAAGTCTACAAGTGCTGATTTTGTTAACATTAGACAATGCCCAGAAGCTCATGAGAACTaGGTAGTACATGGTGTTCCA +
Preference number: 2 (lower is better)
Translates to: FRESKSTSADFVNIRQCPEAHEN*VVHGVP
Trigger: TGGAACACCATGTACTACTCAGTTCTCATGAGCTTC...TGGGCATTGTCTAATGTTAACAAAATCAGCACTTGTAGACTTACTTTCTCTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR-3UTR TCA 90 bp GAGAAAGTAAGTCTACAAGTGCTGATTTTGTTAACATTAGACAATGCCCACATGATATCCTTTCCCCAGTaGTTCAGAGCATTTACTCTC +
Preference number: 2 (lower is better)
Translates to: EKVSLQVLILLTLDNAHMISFPQ*FRAFTL
Trigger: GAGAGTAAATGCTCTGAATCACTGGGGAAAGGATAT...CATGTGGGCATTGTCTAATGTTAACAAAATCAGCACTTGTAGACTTACTTTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR-3UTR TCA 90 bp TGGGAGAAACTAGAGAAGTGTACTAGATTGTTCAGAGAAAGTAAGTCTACAAGTCCTATGAGGACACAATaGTGTCATGATCTTTTCCTG +
Preference number: 2 (lower is better)
Translates to: WEKLEKCTRLFRESKSTSPMRTQ*CHDLFL
Trigger: CAGGAAAAGATCATGACATCATTGTGTCCTCATAGG...ACTTGTAGACTTACTTTCTCTGAACAATCTAGTACACTTCTCTAGTTTCTCCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR-3UTR TCA 90 bp TGGGAGAAACTAGAGAAGTGTACTAGATTGTTCAGAGAAAGTAAGTCTACAAGTTTTCTGGTCCCCAGATaGATTTACCTCTCTCAGATT +
Preference number: 2 (lower is better)
Translates to: WEKLEKCTRLFRESKSTSFLVPR*IYLSQI
Trigger: AATCTGAGAGAGGTAAATTCATCTGGGGACCAGAAA...ACTTGTAGACTTACTTTCTCTGAACAATCTAGTACACTTCTCTAGTTTCTCCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR-3UTR GCA 90 bp CGTAATGACTCCATTGATGCCTGGAAAGTAACTCACTTAGCATTCAGTCAGAACAATCATGACTTTCCTTaGAGTTTAATTCCAACCAGT +
Preference number: 2 (lower is better)
Translates to: RNDSIDAWKVTHLAFSQNNHDFP*SLIPTS
Trigger: ACTGGTTGGAATTAAACTGCAAGGAAAGTCATGATT...GTTCTGACTGAATGCTAAGTGAGTTACTTTCCAGGCATCAATGGAGTCATTACG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR-3UTR GCA 90 bp ATCATCATTCCCATCAACCTCTGTGGGAATAAGCGCAGAATGTCCTTATTTTTCGGAAATCTTTGGTTTTaGTTAAGTGTCCGTGACATT +
Preference number: 2 (lower is better)
Translates to: IIIPINLCGNKRRMSLFFGNLWF*LSVRDI
Trigger: AATGTCACGGACACTTAAGCAAAACCAAAGATTTCC...GAAAAATAAGGACATTCTGCGCTTATTCCCACAGAGGTTGATGGGAATGATGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR-3UTR GCA 90 bp TTCAGAGAAAGTAAGTCTACAAGTGCTGATTTTGTTAACATTAGACAATGCCCAAGAACCAAGTCCCTGTaGATTCTTAGTCACAACGGT +
Preference number: 2 (lower is better)
Translates to: FRESKSTSADFVNIRQCPRTKSL*ILSHNG
Trigger: ACCGTTGTGACTAAGAATGCACAGGGACTTGGTTCT...TGGGCATTGTCTAATGTTAACAAAATCAGCACTTGTAGACTTACTTTCTCTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR-3UTR GCA 90 bp GAGAAAGTAAGTCTACAAGTGCTGATTTTGTTAACATTAGACAATGCCCACATGAAACCGTGTAAAAAGTaGATGAGCAGTGAGCATGGA +
Preference number: 2 (lower is better)
Translates to: EKVSLQVLILLTLDNAHMKPCKK*MSSEHG
Trigger: TCCATGCTCACTGCTCATGCACTTTTTACACGGTTT...CATGTGGGCATTGTCTAATGTTAACAAAATCAGCACTTGTAGACTTACTTTCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR-3UTR GCA 90 bp TTCAGAGAAAGTAAGTCTACAAGTGCTGATTTTGTTAACATTAGACAATGCCCACTCCAGTCTTTCTGCTaGACTGCTTTAAACCAACAG +
Preference number: 2 (lower is better)
Translates to: FRESKSTSADFVNIRQCPLQSFC*TALNQQ
Trigger: CTGTTGGTTTAAAGCAGTGCAGCAGAAAGACTGGAG...TGGGCATTGTCTAATGTTAACAAAATCAGCACTTGTAGACTTACTTTCTCTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR-3UTR CCA 90 bp TTCAGAGAAAGTAAGTCTACAAGTGCTGATTTTGTTAACATTAGACAATGCCCACAAGACCGGGCTGTTTaGAAGAAACCGTGTAAAAAG +
Preference number: 2 (lower is better)
Translates to: FRESKSTSADFVNIRQCPQDRAV*KKPCKK
Trigger: CTTTTTACACGGTTTCTTCCAAACAGCCCGGTCTTG...TGGGCATTGTCTAATGTTAACAAAATCAGCACTTGTAGACTTACTTTCTCTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR-3UTR CCA 90 bp ATCATCATTCCCATCAACCTCTGTGGGAATAAGCGCAGAATGTCCTTATTTTTCGGAGATAGTAAGAACTaGAGGAAAATTCTAGGTGAA +
Preference number: 2 (lower is better)
Translates to: IIIPINLCGNKRRMSLFFGDSKN*RKILGE
Trigger: TTCACCTAGAATTTTCCTCCAGTTCTTACTATCTCC...GAAAAATAAGGACATTCTGCGCTTATTCCCACAGAGGTTGATGGGAATGATGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR-3UTR CCA 90 bp GAGAAAGTAAGTCTACAAGTGCTGATTTTGTTAACATTAGACAATGCCCACATGACTAGAAGAGTGTTTTaGAGTACAGGTTACTGCCAC +
Preference number: 2 (lower is better)
Translates to: EKVSLQVLILLTLDNAHMTRRVF*STGYCH
Trigger: GTGGCAGTAACCTGTACTCCAAAACACTCTTCTAGT...CATGTGGGCATTGTCTAATGTTAACAAAATCAGCACTTGTAGACTTACTTTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR-3UTR CCA 90 bp ATCATCATTCCCATCAACCTCTGTGGGAATAAGCGCAGAATGTCCTTATTTTTCCAATATGCTATTTTCTaGTCCCCAGATGAATTTACC +
Preference number: 2 (lower is better)
Translates to: IIIPINLCGNKRRMSLFFQYAIF*SPDEFT
Trigger: GGTAAATTCATCTGGGGACCAGAAAATAGCATATTG...GAAAAATAAGGACATTCTGCGCTTATTCCCACAGAGGTTGATGGGAATGATGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR-3UTR CCA 90 bp GAGAAAGTAAGTCTACAAGTGCTGATTTTGTTAACATTAGACAATGCCCACATGCTGACAGCTGATCTCTaGGTTTGTAGAATGCAATCT +
Preference number: 2 (lower is better)
Translates to: EKVSLQVLILLTLDNAHMLTADL*VCRMQS
Trigger: AGATTGCATTCTACAAACCCAGAGATCAGCTGTCAG...CATGTGGGCATTGTCTAATGTTAACAAAATCAGCACTTGTAGACTTACTTTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR-3UTR TCA 90 bp GAGAAAGTAAGTCTACAAGTGCTGATTTTGTTAACATTAGACAATGCCCACATGTCCTTACTACTTTCATaGCCAGGAGATAGTAAGAAC +
Preference number: 2 (lower is better)
Translates to: EKVSLQVLILLTLDNAHMSLLLS*PGDSKN
Trigger: GTTCTTACTATCTCCTGGTCATGAAAGTAGTAAGGA...CATGTGGGCATTGTCTAATGTTAACAAAATCAGCACTTGTAGACTTACTTTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR-3UTR TCA 90 bp TGGGAGAAACTAGAGAAGTGTACTAGATTGTTCAGAGAAAGTAAGTCTACAAGTAATTCTGTCCAGCAATaGGATTTGGGCATGACAAAA +
Preference number: 2 (lower is better)
Translates to: WEKLEKCTRLFRESKSTSNSVQQ*DLGMTK
Trigger: TTTTGTCATGCCCAAATCTCATTGCTGGACAGAATT...ACTTGTAGACTTACTTTCTCTGAACAATCTAGTACACTTCTCTAGTTTCTCCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR-3UTR TCA 90 bp GAGAAAGTAAGTCTACAAGTGCTGATTTTGTTAACATTAGACAATGCCCACATGCACTATCTGTGCCTTTaGCAAACCAAACCTATAATG +
Preference number: 2 (lower is better)
Translates to: EKVSLQVLILLTLDNAHMHYLCL*QTKPIM
Trigger: CATTATAGGTTTGGTTTGTCAAAGGCACAGATAGTG...CATGTGGGCATTGTCTAATGTTAACAAAATCAGCACTTGTAGACTTACTTTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR-3UTR GCA 90 bp GAGAAAGTAAGTCTACAAGTGCTGATTTTGTTAACATTAGACAATGCCCACATGCATAGGTTTTCTAAGTaGAGTGGTGGCATATTCAGT +
Preference number: 2 (lower is better)
Translates to: EKVSLQVLILLTLDNAHMHRFSK*SGGIFS
Trigger: ACTGAATATGCCACCACTGCACTTAGAAAACCTATG...CATGTGGGCATTGTCTAATGTTAACAAAATCAGCACTTGTAGACTTACTTTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR-3UTR CCA 90 bp TTCAGAGAAAGTAAGTCTACAAGTGCTGATTTTGTTAACATTAGACAATGCCCAAAAATTAGCTGCTCCTaGGCTATCTGTTCTAACCAC +
Preference number: 2 (lower is better)
Translates to: FRESKSTSADFVNIRQCPKISCS*AICSNH
Trigger: GTGGTTAGAACAGATAGCCCAGGAGCAGCTAATTTT...TGGGCATTGTCTAATGTTAACAAAATCAGCACTTGTAGACTTACTTTCTCTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR-3UTR CCA 90 bp TGGGATATTGAGATTTTTCTAGAAATGCAAAGGTCTGCAGCTCCATCTCTCATCTTCAACCTTAACAAATaGAACAGCTTACTCATCTGT +
Preference number: 2 (lower is better)
Translates to: WDIEIFLEMQRSAAPSLIFNLNK*NSLLIC
Trigger: ACAGATGAGTAAGCTGTTCCATTTGTTAAGGTTGAA...GATGAGAGATGGAGCTGCAGACCTTTGCATTTCTAGAAAAATCTCAATATCCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR-3UTR TCA 90 bp GAGAAAGTAAGTCTACAAGTGCTGATTTTGTTAACATTAGACAATGCCCACATGTTGCTTAAGTGTCCGTaGCATTTAATCATGACTTTC +
Preference number: 2 (lower is better)
Translates to: EKVSLQVLILLTLDNAHMLLKCP*HLIMTF
Trigger: GAAAGTCATGATTAAATGTCACGGACACTTAAGCAA...CATGTGGGCATTGTCTAATGTTAACAAAATCAGCACTTGTAGACTTACTTTCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR-3UTR CCA 90 bp TTCAGAGAAAGTAAGTCTACAAGTGCTGATTTTGTTAACATTAGACAATGCCCAGAACTGAGTAGTACATaGTGTTCCACTGTGAAATGT +
Preference number: 2 (lower is better)
Translates to: FRESKSTSADFVNIRQCPELSST*CSTVKC
Trigger: ACATTTCACAGTGGAACACCATGTACTACTCAGTTC...TGGGCATTGTCTAATGTTAACAAAATCAGCACTTGTAGACTTACTTTCTCTGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR-3UTR GCA 90 bp TTCAGAGAAAGTAAGTCTACAAGTGCTGATTTTGTTAACATTAGACAATGCCCAGGCAAATTTTACGACTaGAATTTCTACCACCCATTT +
Preference number: 2 (lower is better)
Translates to: FRESKSTSADFVNIRQCPGKFYD*NFYHPF
Trigger: AAATGGGTGGTAGAAATTGCAGTCGTAAAATTTGCC...TGGGCATTGTCTAATGTTAACAAAATCAGCACTTGTAGACTTACTTTCTCTGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR-3UTR GCA 90 bp GAGAAAGTAAGTCTACAAGTGCTGATTTTGTTAACATTAGACAATGCCCACATGAAGACAACCAAGTTGTaGATCTTAACTTGTTTTGCA +
Preference number: 2 (lower is better)
Translates to: EKVSLQVLILLTLDNAHMKTTKL*ILTCFA
Trigger: TGCAAAACAAGTTAAGATGCACAACTTGGTTGTCTT...CATGTGGGCATTGTCTAATGTTAACAAAATCAGCACTTGTAGACTTACTTTCTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR-3UTR CCA 90 bp GAGAAAGTAAGTCTACAAGTGCTGATTTTGTTAACATTAGACAATGCCCACATGACTTCACTGAGACAATaGTCTAAAGGACTAAAATAC +
Preference number: 2 (lower is better)
Translates to: EKVSLQVLILLTLDNAHMTSLRQ*SKGLKY
Trigger: GTATTTTAGTCCTTTAGACCATTGTCTCAGTGAAGT...CATGTGGGCATTGTCTAATGTTAACAAAATCAGCACTTGTAGACTTACTTTCTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR-3UTR CAA 90 bp AGTGGCCGCATTGGTAGGGTCTGTCGGGGTTCTGCGTGCACACGTGCATCTGTAGCTGGCTTGTGGAAGTaGGGCTTGCCAGGACTCGCT +
Preference number: 3 (lower is better)
Translates to: SGRIGRVCRGSACTRASVAGLWK*GLPGLA
Trigger: AGCGAGTCCTGGCAAGCCCAACTTCCACAAGCCAGC...TACAGATGCACGTGTGCACGCAGAACCCCGACAGACCCTACCAATGCGGCCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434521.1
3UTR CCA 72 bp TTCCAAAGATGCCAGTCACTGAACTCCGAGTGGAGCTaGCTTGTGGAAGTTGGGCTTGCCAGGACTCGCTGG +
Preference number: 3 (lower is better)
Translates to: FQRCQSLNSEWS*LVEVGLARTRW
Trigger: CCAGCGAGTCCTGGCAAGCCCAACTTCCACAAGCCAGCTCCACTCGGAGTTCAGTGACTGGCATCTTTGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434521.1
3UTR GCA 72 bp CAATGGGCCCAGACTTATCCAGAAGAGAGAAGTTCCTaGTGCACGGAGTCTGGGGGAAAACAACGGAGCGCT +
Preference number: 3 (lower is better)
Translates to: QWAQTYPEERSS*CTESGGKQRSA
Trigger: AGCGCTCCGTTGTTTTCCCCCAGACTCCGTGCAGCAGGAACTTCTCTCTTCTGGATAAGTCTGGGCCCATTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434521.1
3UTR TCA 72 bp GCCAGTGTCAGGCCAGGCCAAACTGACACAGCAGAATaGAGGGCTGTACAGTGGGTCCCCATGAAACATGTT +
Preference number: 3 (lower is better)
Translates to: ASVRPGQTDTAE*RAVQWVPMKHV
Trigger: AACATGTTTCATGGGGACCCACTGTACAGCCCTTCATTCTGCTGTGTCAGTTTGGCCTGGCCTGACACTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR TCA 72 bp CTACACTGCCAACGCTTACCACTAATGAGGCAACTCTaGCCCATTCAGGGTCGCAGATCTCCTTCCCTGAGC +
Preference number: 3 (lower is better)
Translates to: LHCQRLPLMRQL*PIQGRRSPSLS
Trigger: GCTCAGGGAAGGAGATCTGCGACCCTGAATGGGTCAGAGTTGCCTCATTAGTGGTAAGCGTTGGCAGTGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR CCA 72 bp GGGTACACTCAGAGGGACCCGTTAACCCTGCTGTTCTaGAAATGCCCTCTTTGTGAGACGTGCCATGATTCC +
Preference number: 3 (lower is better)
Translates to: GYTQRDPLTLLF*KCPLCETCHDS
Trigger: GGAATCATGGCACGTCTCACAAAGAGGGCATTTCCAGAACAGCAGGGTTAACGGGTCCCTCTGAGTGTACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR CCA 72 bp GTCACTGAACTCCGAGTGGAGCTGGCTTGTGGAAGTTaGGCTTGCCAGGACTCGCTGGTTTTTCACGTTGAT +
Preference number: 3 (lower is better)
Translates to: VTELRVELACGS*ACQDSLVFHVD
Trigger: ATCAACGTGAAAAACCAGCGAGTCCTGGCAAGCCCAACTTCCACAAGCCAGCTCCACTCGGAGTTCAGTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434521.1
3UTR TCA 72 bp AACTCTGACCCATTCAGGGTCGCAGATCTCCTTCCCTaGGCAACTCCAGCCTTGTACCCAACTTGTTGCCTT +
Preference number: 3 (lower is better)
Translates to: NSDPFRVADLLP*ATPALYPTCCL
Trigger: AAGGCAACAAGTTGGGTACAAGGCTGGAGTTGCTCAGGGAAGGAGATCTGCGACCCTGAATGGGTCAGAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR CCA 72 bp GTTCCAAGTCAATGTCCAGGTGTAAGCCTGTCTTTGTaGACAGACAGCCTAGGCTGGTCTGCTAGAAGCTGG +
Preference number: 3 (lower is better)
Translates to: VPSQCPGVSLSL*TDSLGWSARSW
Trigger: CCAGCTTCTAGCAGACCAGCCTAGGCTGTCTGTCCACAAAGACAGGCTTACACCTGGACATTGACTTGGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR CCA 72 bp ATGAGAGCAATGAATTTGCTCCTAAACGCAGGCTGCTaGGTACACTCAGAGGGACCCGTTAACCCTGCTGTT +
Preference number: 3 (lower is better)
Translates to: MRAMNLLLNAGC*VHSEGPVNPAV
Trigger: AACAGCAGGGTTAACGGGTCCCTCTGAGTGTACCCAGCAGCCTGCGTTTAGGAGCAAATTCATTGCTCTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR CCA 72 bp GCTCTGTCTGGCCAGTTGTACCTGACAGCTGATCTCTaGGTTTGTAGAATGCAATCTTGGGGAGGGCTGAAA +
Preference number: 3 (lower is better)
Translates to: ALSGQLYLTADL*VCRMQSWGGLK
Trigger: TTTCAGCCCTCCCCAAGATTGCATTCTACAAACCCAGAGATCAGCTGTCAGGTACAACTGGCCAGACAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR CCA 72 bp ACAATGCCCACATGTGGATCAACAGGGACTGTGGGTTaGCAGACTTTTGCTCTAAGATGGCTGCTTTCCCCA +
Preference number: 3 (lower is better)
Translates to: TMPTCGSTGTVG*QTFALRWLLSP
Trigger: TGGGGAAAGCAGCCATCTTAGAGCAAAAGTCTGCCAACCCACAGTCCCTGTTGATCCACATGTGGGCATTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR-3UTR CAA 90 bp TTAAATCCTGATTCAATGGGCCCAGACTTATCCAGAAGAGAGAAGTTCCTGCTGGCGAGTTTGCTGCTTTaGTTGAAGGGCTGCAGGGCG +
Preference number: 3 (lower is better)
Translates to: LNPDSMGPDLSRREKFLLASLLL*LKGCRA
Trigger: CGCCCTGCAGCCCTTCAACAAAAGCAGCAAACTCGC...CAGCAGGAACTTCTCTCTTCTGGATAAGTCTGGGCCCATTGAATCAGGATTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434521.1
3UTR GCA 72 bp ACTCAGAGGGACCCGTTAACCCTGCTGTTCTGGAAATaGCCTCTTTGTGAGACGTGCCATGATTCCCATTTT +
Preference number: 3 (lower is better)
Translates to: TQRDPLTLLFWK*PLCETCHDSHF
Trigger: AAAATGGGAATCATGGCACGTCTCACAAAGAGGGCATTTCCAGAACAGCAGGGTTAACGGGTCCCTCTGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR GCA 72 bp AATATGAGAGCAATGAATTTGCTCCTAAACGCAGGCTaGTGGGTACACTCAGAGGGACCCGTTAACCCTGCT +
Preference number: 3 (lower is better)
Translates to: NMRAMNLLLNAG*WVHSEGPVNPA
Trigger: AGCAGGGTTAACGGGTCCCTCTGAGTGTACCCAGCAGCCTGCGTTTAGGAGCAAATTCATTGCTCTCATATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR GCA 72 bp ATGTGGATCAACAGGGACTGTGGGTTGGCAGACTTTTaGTCTAAGATGGCTGCTTTCCCCAACATGTGGCAA +
Preference number: 3 (lower is better)
Translates to: MWINRDCGLADF*SKMAAFPNMWQ
Trigger: TTGCCACATGTTGGGGAAAGCAGCCATCTTAGAGCAAAAGTCTGCCAACCCACAGTCCCTGTTGATCCACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR-3UTR CAA 90 bp TTTTCACTTGTGTTTGTAGACATGCTCCTCCCACACTCAGGAGAGAGGAAAGGGATTGCTAAAAGGGCCTaGACGATGGGGTTTGGCACT +
Preference number: 3 (lower is better)
Translates to: FSLVFVDMLLPHSGERKGIAKRA*TMGFGT
Trigger: AGTGCCAAACCCCATCGTCAAGGCCCTTTTAGCAAT...CCCTTTCCTCTCTCCTGAGTGTGGGAGGAGCATGTCTACAAACACAAGTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR TCA 72 bp ACCGGGCTGTTTGGAAGAAACCGTGTAAAAAGTGCATaGGCAGTGAGCATGGAAGACATGGAAATGGGATGC +
Preference number: 3 (lower is better)
Translates to: TGLFGRNRVKSA*AVSMEDMEMGC
Trigger: GCATCCCATTTCCATGTCTTCCATGCTCACTGCTCATGCACTTTTTACACGGTTTCTTCCAAACAGCCCGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR TCA 72 bp AAGGTCTGCAGCTCCATCTCTCATCCTATTGCACCCTaGCTTTTCCCTGGCATTACCTTTCGTCTTAGACTC +
Preference number: 3 (lower is better)
Translates to: KVCSSISHPIAP*LFPGITFRLRL
Trigger: GAGTCTAAGACGAAAGGTAATGCCAGGGAAAAGTCAGGGTGCAATAGGATGAGAGATGGAGCTGCAGACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR GCA 72 bp AACCTTATTCTCTTCTGGCCACCCTCCAACACAACCTaGCCTTCCTGCCTGTTGCCATTTGTCCTAATGTAT +
Preference number: 3 (lower is better)
Translates to: NLILFWPPSNTT*PSCLLPFVLMY
Trigger: ATACATTAGGACAAATGGCAACAGGCAGGAAGGGCAGGTTGTGTTGGAGGGTGGCCAGAAGAGAATAAGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR CCA 72 bp ACTGGCCATCAAGGTAGACAGTCGCTGAGATGCTGCTaGGAGCTATCAGCTCTTCCCAAAACTAGATCATTT +
Preference number: 3 (lower is better)
Translates to: TGHQGRQSLRCC*ELSALPKTRSF
Trigger: AAATGATCTAGTTTTGGGAAGAGCTGATAGCTCCCAGCAGCATCTCAGCGACTGTCTACCTTGATGGCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR-3UTR CAA 90 bp TGGGATATTGAGATTTTTCTAGAAATGCAAAGGTCTGCAGCTCCATCTCTCATCGGGCTGAAGGTAGCATaGACTCAGCGAAGGCTCTCA +
Preference number: 3 (lower is better)
Translates to: WDIEIFLEMQRSAAPSLIGLKVA*TQRRLS
Trigger: TGAGAGCCTTCGCTGAGTCAATGCTACCTTCAGCCC...GATGAGAGATGGAGCTGCAGACCTTTGCATTTCTAGAAAAATCTCAATATCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR-3UTR CAA 90 bp ATCATCATTCCCATCAACCTCTGTGGGAATAAGCGCAGAATGTCCTTATTTTTCGGTGTAAGCCTGTCTTaGTGGACAGACAGCCTAGGC +
Preference number: 3 (lower is better)
Translates to: IIIPINLCGNKRRMSLFFGVSLS*WTDSLG
Trigger: GCCTAGGCTGTCTGTCCACAAAGACAGGCTTACACC...GAAAAATAAGGACATTCTGCGCTTATTCCCACAGAGGTTGATGGGAATGATGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR TCA 72 bp ATCTCTGGGTTTGTAGAATGCAATCTTGGGGAGGGCTaGAATAGGTGCCTTCCTAGTAACCTGCGTTGTTGT +
Preference number: 3 (lower is better)
Translates to: ISGFVECNLGEG*NRCLPSNLRCC
Trigger: ACAACAACGCAGGTTACTAGGAAGGCACCTATTTCAGCCCTCCCCAAGATTGCATTCTACAAACCCAGAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR GCA 72 bp AAATGCAAAGGTCTGCAGCTCCATCTCTCATCCTATTaGACCCTGACTTTTCCCTGGCATTACCTTTCGTCT +
Preference number: 3 (lower is better)
Translates to: KCKGLQLHLSSY*TLTFPWHYLSS
Trigger: AGACGAAAGGTAATGCCAGGGAAAAGTCAGGGTGCAATAGGATGAGAGATGGAGCTGCAGACCTTTGCATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR TCA 72 bp CATCTAGATTGTGCCCCAGAACTTGAACTGGTTCCTTaGGTACCTCATGCATGTAACTACACTATCTGTGCC +
Preference number: 3 (lower is better)
Translates to: HLDCAPELELVP*VPHACNYTICA
Trigger: GGCACAGATAGTGTAGTTACATGCATGAGGTACTCAAGGAACCAGTTCAAGTTCTGGGGCACAATCTAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR CCA 72 bp CTTCTCCATGGTTCCTCCTCTCAAAGTCTCCTTGTCTaGGCTATTTTCACTTGTGTTTGTAGACATGCTCCT +
Preference number: 3 (lower is better)
Translates to: LLHGSSSQSLLV*AIFTCVCRHAP
Trigger: AGGAGCATGTCTACAAACACAAGTGAAAATAGCCCAGACAAGGAGACTTTGAGAGGAGGAACCATGGAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR CCA 72 bp GTGCTGATTTTGTTAACATTAGACAATGCCCACATGTaGATCAACAGGGACTGTGGGTTGGCAGACTTTTGC +
Preference number: 3 (lower is better)
Translates to: VLILLTLDNAHM*INRDCGLADFC
Trigger: GCAAAAGTCTGCCAACCCACAGTCCCTGTTGATCCACATGTGGGCATTGTCTAATGTTAACAAAATCAGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR-3UTR CAA 90 bp ATCATCATTCCCATCAACCTCTGTGGGAATAAGCGCAGAATGTCCTTATTTTTCCCATCTCTCATCCTATaGCACCCTGACTTTTCCCTG +
Preference number: 3 (lower is better)
Translates to: IIIPINLCGNKRRMSLFFPSLIL*HPDFSL
Trigger: CAGGGAAAAGTCAGGGTGCAATAGGATGAGAGATGG...GAAAAATAAGGACATTCTGCGCTTATTCCCACAGAGGTTGATGGGAATGATGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR TCA 72 bp TTCTTTTCAGTTTGGCTCTGTCTGGCCAGTTGTACCTaGCAGCTGATCTCTGGGTTTGTAGAATGCAATCTT +
Preference number: 3 (lower is better)
Translates to: FFSVWLCLASCT*QLISGFVECNL
Trigger: AAGATTGCATTCTACAAACCCAGAGATCAGCTGTCAGGTACAACTGGCCAGACAGAGCCAAACTGAAAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR GCA 72 bp AAGTCTACAAGTGCTGATTTTGTTAACATTAGACAATaGCCACATGTGGATCAACAGGGACTGTGGGTTGGC +
Preference number: 3 (lower is better)
Translates to: KSTSADFVNIRQ*PHVDQQGLWVG
Trigger: GCCAACCCACAGTCCCTGTTGATCCACATGTGGGCATTGTCTAATGTTAACAAAATCAGCACTTGTAGACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR CCA 72 bp GGAGATAGTAAGAACTGGAGGAAAATTCTAGGTGAATaGCTTGAGATTGGGCAACAGAGGTCAGAATTAGCC +
Preference number: 3 (lower is better)
Translates to: GDSKNWRKILGE*LEIGQQRSELA
Trigger: GGCTAATTCTGACCTCTGTTGCCCAATCTCAAGCCATTCACCTAGAATTTTCCTCCAGTTCTTACTATCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR-3UTR CAA 90 bp GTTTTCCTTAATTCGTTAGTCATCACCTTAGCCTCTGCATTTAAACTGGGGGAACCTAATCCTGGTCTCTaGATACTGCTGCTAACAACC +
Preference number: 3 (lower is better)
Translates to: VFLNSLVITLASAFKLGEPNPGL*ILLLTT
Trigger: GGTTGTTAGCAGCAGTATCAAGAGACCAGGATTAGG...TTCCCCCAGTTTAAATGCAGAGGCTAAGGTGATGACTAACGAATTAAGGAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR GCA 72 bp ACATTTCATTCACACTTCCCAGTGACGCACATTGTTTaGAAACGTATCCATCACTTAGGGCAGGGAATTGTA +
Preference number: 3 (lower is better)
Translates to: TFHSHFPVTHIV*KRIHHLGQGIV
Trigger: TACAATTCCCTGCCCTAAGTGATGGATACGTTTGCAAACAATGTGCGTCACTGGGAAGTGTGAATGAAATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR GCA 72 bp TGGCAAATTTTACGACTGCAATTTCTACCACCCATTTaGTGTATCCCAGGGGACTGTGTGTCCACTTTAAAT +
Preference number: 3 (lower is better)
Translates to: WQILRLQFLPPI*CIPGDCVSTLN
Trigger: ATTTAAAGTGGACACACAGTCCCCTGGGATACAGCAAATGGGTGGTAGAAATTGCAGTCGTAAAATTTGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR-3UTR CAA 90 bp TGGGATATTGAGATTTTTCTAGAAATGCAAAGGTCTGCAGCTCCATCTCTCATCTGTGACCCAATTTCATaGAGCACCACTGTTGAACCA +
Preference number: 3 (lower is better)
Translates to: WDIEIFLEMQRSAAPSLICDPIS*STTVEP
Trigger: TGGTTCAACAGTGGTGCTCAATGAAATTGGGTCACA...GATGAGAGATGGAGCTGCAGACCTTTGCATTTCTAGAAAAATCTCAATATCCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR-3UTR CAA 90 bp ATCATCATTCCCATCAACCTCTGTGGGAATAAGCGCAGAATGTCCTTATTTTTCGTGGCAGAGAGATCATaGTTAAGGAAAACCTTCCCA +
Preference number: 3 (lower is better)
Translates to: IIIPINLCGNKRRMSLFFVAERS*LRKTFP
Trigger: TGGGAAGGTTTTCCTTAACAATGATCTCTCTGCCAC...GAAAAATAAGGACATTCTGCGCTTATTCCCACAGAGGTTGATGGGAATGATGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR-3UTR CAA 90 bp ATCATCATTCCCATCAACCTCTGTGGGAATAAGCGCAGAATGTCCTTATTTTTCACATTCAGTGGAAGTTaGGGATCAGCTAGCAAAGCT +
Preference number: 3 (lower is better)
Translates to: IIIPINLCGNKRRMSLFFTFSGS*GSASKA
Trigger: AGCTTTGCTAGCTGATCCCAAACTTCCACTGAATGT...GAAAAATAAGGACATTCTGCGCTTATTCCCACAGAGGTTGATGGGAATGATGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR TCA 72 bp GACTCGCTGGTTTTTCACGTTGATTTGATTAAATCCTaGTTCAATGGGCCCAGACTTATCCAGAAGAGAGAA +
Preference number: 3 (lower is better)
Translates to: DSLVFHVDLIKS*FNGPRLIQKRE
Trigger: TTCTCTCTTCTGGATAAGTCTGGGCCCATTGAATCAGGATTTAATCAAATCAACGTGAAAAACCAGCGAGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434521.1
3UTR GCA 72 bp ATTAAAATCATTTTGGACCCAAATGATCTCAGTACCTaGTTCAGGGTTCCAAGTCAATGTCCAGGTGTAAGC +
Preference number: 3 (lower is better)
Translates to: IKIILDPNDLST*FRVPSQCPGVS
Trigger: GCTTACACCTGGACATTGACTTGGAACCCTGAAGCAGGTACTGAGATCATTTGGGTCCAAAATGATTTTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR-3UTR CAA 90 bp TTCAGAGAAAGTAAGTCTACAAGTGCTGATTTTGTTAACATTAGACAATGCCCAGTGAATGGCTTGAGATaGGGCAACAGAGGTCAGAAT +
Preference number: 3 (lower is better)
Translates to: FRESKSTSADFVNIRQCPVNGLR*GNRGQN
Trigger: ATTCTGACCTCTGTTGCCCAATCTCAAGCCATTCAC...TGGGCATTGTCTAATGTTAACAAAATCAGCACTTGTAGACTTACTTTCTCTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR TCA 72 bp AAGGATTGCTTCAAGAGCCAAACCCTGATTCAGCTCTaGCAGACTACCTTTCTTATCTTAAATATCCTTTCC +
Preference number: 3 (lower is better)
Translates to: KDCFKSQTLIQL*QTTFLILNILS
Trigger: GGAAAGGATATTTAAGATAAGAAAGGTAGTCTGTCAGAGCTGAATCAGGGTTTGGCTCTTGAAGCAATCCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR-3UTR CAA 90 bp TTCAGAGAAAGTAAGTCTACAAGTGCTGATTTTGTTAACATTAGACAATGCCCAGCTCAGAGGAAATCTTaGGTTTTGCTTAAGTGTCCG +
Preference number: 3 (lower is better)
Translates to: FRESKSTSADFVNIRQCPAQRKS*VLLKCP
Trigger: CGGACACTTAAGCAAAACCAAAGATTTCCTCTGAGC...TGGGCATTGTCTAATGTTAACAAAATCAGCACTTGTAGACTTACTTTCTCTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR-3UTR CAA 90 bp GAGCCAAACCCTGATTCAGCTCTGACAGACTACCTTTCTTATCTTAAATATCCTTGTGTCTCATTTTTATaGAGGGAAGACAATGGGAAA +
Preference number: 3 (lower is better)
Translates to: EPNPDSALTDYLSYLKYPCVSFL*REDNGK
Trigger: TTTCCCATTGTCTTCCCTCAATAAAAATGAGACACA...AGGATATTTAAGATAAGAAAGGTAGTCTGTCAGAGCTGAATCAGGGTTTGGCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR-3UTR CAA 90 bp TGGGAGAAACTAGAGAAGTGTACTAGATTGTTCAGAGAAAGTAAGTCTACAAGTAACCACACAGTATCCTaGCCTTTTAGTAGTGAGTTC +
Preference number: 3 (lower is better)
Translates to: WEKLEKCTRLFRESKSTSNHTVS*PFSSEF
Trigger: GAACTCACTACTAAAAGGCAAGGATACTGTGTGGTT...ACTTGTAGACTTACTTTCTCTGAACAATCTAGTACACTTCTCTAGTTTCTCCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR-3UTR CAA 90 bp GTTTTCCTTAATTCGTTAGTCATCACCTTAGCCTCTGCATTTAAACTGGGGGAAGCAAAGACAACCAAGTaGTGCATCTTAACTTGTTTT +
Preference number: 3 (lower is better)
Translates to: VFLNSLVITLASAFKLGEAKTTK*CILTCF
Trigger: AAAACAAGTTAAGATGCACAACTTGGTTGTCTTTGC...TTCCCCCAGTTTAAATGCAGAGGCTAAGGTGATGACTAACGAATTAAGGAAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR-3UTR CAA 90 bp GAGAAAGTAAGTCTACAAGTGCTGATTTTGTTAACATTAGACAATGCCCACATGCATGTTCTTGCAATCTaGACAGGACAAAATAAGTCC +
Preference number: 3 (lower is better)
Translates to: EKVSLQVLILLTLDNAHMHVLAI*TGQNKS
Trigger: GGACTTATTTTGTCCTGTCAAGATTGCAAGAACATG...CATGTGGGCATTGTCTAATGTTAACAAAATCAGCACTTGTAGACTTACTTTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR-3UTR CAA 90 bp TTCAGAGAAAGTAAGTCTACAAGTGCTGATTTTGTTAACATTAGACAATGCCCAAGTGACGCACATTGTTaGCAAACGTATCCATCACTT +
Preference number: 3 (lower is better)
Translates to: FRESKSTSADFVNIRQCPSDAHC*QTYPSL
Trigger: AAGTGATGGATACGTTTGCAAACAATGTGCGTCACT...TGGGCATTGTCTAATGTTAACAAAATCAGCACTTGTAGACTTACTTTCTCTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR TCA 72 bp TCTCAACGAGCTGCTTCGGAACAATATAACGTATTATaGAGCTCCGTACATTTTACATGTTCTTGCAATCTT +
Preference number: 3 (lower is better)
Translates to: SQRAASEQYNVL*SSVHFTCSCNL
Trigger: AAGATTGCAAGAACATGTAAAATGTACGGAGCTTCATAATACGTTATATTGTTCCGAAGCAGCTCGTTGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR TCA 72 bp CTGTTATACAGCAGCATAGATTCCTTACTACTTTCATaGCCAGGAGATAGTAAGAACTGGAGGAAAATTCTA +
Preference number: 3 (lower is better)
Translates to: LLYSSIDSLLLS*PGDSKNWRKIL
Trigger: TAGAATTTTCCTCCAGTTCTTACTATCTCCTGGTCATGAAAGTAGTAAGGAATCTATGCTGCTGTATAACAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR TCA 72 bp TTCAATTATGAGCCCTATGAGGACACAATGATGTCATaGTCTTTTCCTGTTATACATAGTTTCCCAAGAAGG +
Preference number: 3 (lower is better)
Translates to: FNYEPYEDTMMS*SFPVIHSFPRR
Trigger: CCTTCTTGGGAAACTATGTATAACAGGAAAAGATCATGACATCATTGTGTCCTCATAGGGCTCATAATTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR TCA 72 bp ACTTGTTTAAGCTTTCCAAACTCCAAAAGGCAGATGTaGAACTGGGCATTCACTCTAACCATTTTATTTGGT +
Preference number: 3 (lower is better)
Translates to: TCLSFPNSKRQM*NWAFTLTILFG
Trigger: ACCAAATAAAATGGTTAGAGTGAATGCCCAGTTTCACATCTGCCTTTTGGAGTTTGGAAAGCTTAAACAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR GCA 90 bp GGTAGCATTGACTCAGCGAAGGCTCTCACTCTGCTTCCGTGGTCCCCGCTGGGGAGCCGGCGCAGCGAGTaGAGTGGCCCATGCATAGGG +
Preference number: 4 (lower is better)
Translates to: GSIDSAKALTLLPWSPLGSRRSE*SGPCIG
Trigger: CCCTATGCATGGGCCACTGCACTCGCTGCGCCGGCT...CCCCAGCGGGGACCACGGAAGCAGAGTGAGAGCCTTCGCTGAGTCAATGCTACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR GCA 90 bp GGTAGCATTGACTCAGCGAAGGCTCTCACTCTGCTTCCGTGGTCCCCGCTGGGGGTTCCTCACGGCGCCTaGCTGCACCTTCTCTGGGGG +
Preference number: 4 (lower is better)
Translates to: GSIDSAKALTLLPWSPLGVPHGA*LHLLWG
Trigger: CCCCCAGAGAAGGTGCAGGCAGGCGCCGTGAGGAAC...CCCCAGCGGGGACCACGGAAGCAGAGTGAGAGCCTTCGCTGAGTCAATGCTACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR GCA 90 bp CTCCGAGTGGAGCTGGCTTGTGGAAGTTGGGCTTGCCAGGACTCGCTGGTTTTTTCTGCGCCGCGCAGATaGCGTAGGCCAGGCCGGGCA +
Preference number: 4 (lower is better)
Translates to: LRVELACGSWACQDSLVFSAPRR*RRPGRA
Trigger: TGCCCGGCCTGGCCTACGGCATCTGCGCGGCGCAGA...AAAAACCAGCGAGTCCTGGCAAGCCCAACTTCCACAAGCCAGCTCCACTCGGAG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000434521.1
CDS-3UTR GCA 90 bp GGTAGCATTGACTCAGCGAAGGCTCTCACTCTGCTTCCGTGGTCCCCGCTGGGGCTCAGCTGGGTGGCCTaGGTGAAGCTCCTCTCACAC +
Preference number: 4 (lower is better)
Translates to: GSIDSAKALTLLPWSPLGLSWVA*VKLLSH
Trigger: GTGTGAGAGGAGCTTCACGCAGGCCACCCAGCTGAG...CCCCAGCGGGGACCACGGAAGCAGAGTGAGAGCCTTCGCTGAGTCAATGCTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CCA 90 bp GAACTCCGAGTGGAGCTGGCTTGTGGAAGTTGGGCTTGCCAGGACTCGCTGGTTGGCCGGGCACAGTACTaGTGCAGAGGCACACCTCGC +
Preference number: 4 (lower is better)
Translates to: ELRVELACGSWACQDSLVGRAQY*CRGTPR
Trigger: GCGAGGTGTGCCTCTGCACCAGTACTGTGCCCGGCC...AACCAGCGAGTCCTGGCAAGCCCAACTTCCACAAGCCAGCTCCACTCGGAGTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434521.1
CDS-3UTR CCA 90 bp GGTGGTGGCCCCGGCAAAGGCACGACCACAGTAGCCGCACTTGAAAGGCCGGTCAGTGGAGCTGGCTTGTaGAAGTTGGGCTTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: GGGPGKGTTTVAALERPVSGAGL*KLGLPG
Trigger: TCCTGGCAAGCCCAACTTCCACAAGCCAGCTCCACT...GACCGGCCTTTCAAGTGCGGCTACTGTGGTCGTGCCTTTGCCGGGGCCACCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434521.1
CDS-3UTR GCA 90 bp AGTGGCCGCATTGGTAGGGTCTGTCGGGGTTCTGCGTGCACACGTGCATCTGTACGGGCACAGTACTGGTaGAGAGGCACACCTCGCGAG +
Preference number: 4 (lower is better)
Translates to: SGRIGRVCRGSACTRASVRAQYW*RGTPRE
Trigger: CTCGCGAGGTGTGCCTCTGCACCAGTACTGTGCCCG...TACAGATGCACGTGTGCACGCAGAACCCCGACAGACCCTACCAATGCGGCCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434521.1
CDS-3UTR GCA 90 bp AGATGCCAGTCACTGAACTCCGAGTGGAGCTGGCTTGTGGAAGTTGGGCTTGCCCTCACGGCGCCTGCCTaGACCTTCTCTGGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: RCQSLNSEWSWLVEVGLALTAPA*TFSGGR
Trigger: TCTGCCCCCAGAGAAGGTGCAGGCAGGCGCCGTGAG...GGCAAGCCCAACTTCCACAAGCCAGCTCCACTCGGAGTTCAGTGACTGGCATCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434521.1
CDS-3UTR GCA 90 bp AGATGCCAGTCACTGAACTCCGAGTGGAGCTGGCTTGTGGAAGTTGGGCTTGCCGTTCCTCACGGCGCCTaGCTGCACCTTCTCTGGGGG +
Preference number: 4 (lower is better)
Translates to: RCQSLNSEWSWLVEVGLAVPHGA*LHLLWG
Trigger: CCCCCAGAGAAGGTGCAGGCAGGCGCCGTGAGGAAC...GGCAAGCCCAACTTCCACAAGCCAGCTCCACTCGGAGTTCAGTGACTGGCATCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434521.1
CDS-3UTR TCA 90 bp GGCCCCGGCAAAGGCACGACCACAGTAGCCGCACTTGAAAGGCCGGTCACTAGAAAAGATGCCAGTCACTaGACTCCGAGTGGAGCTGGC +
Preference number: 4 (lower is better)
Translates to: GPGKGTTTVAALERPVTRKDASH*TPSGAG
Trigger: GCCAGCTCCACTCGGAGTTCAGTGACTGGCATCTTT...TCTAGTGACCGGCCTTTCAAGTGCGGCTACTGTGGTCGTGCCTTTGCCGGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434521.1
CDS-3UTR GCA 90 bp GAGCGCTGCTGGGTGGTAGGGGCGAGTTTGCTGCTTTTGTTGAAGGGCTGCAGGAAAACAACGGAGCGCTaGTGGGTGGTAGGGGCGAGT +
Preference number: 4 (lower is better)
Translates to: ERCWVVGASLLLLLKGCRKTTER*WVVGAS
Trigger: ACTCGCCCCTACCACCCAGCAGCGCTCCGTTGTTTT...CCTGCAGCCCTTCAACAAAAGCAGCAAACTCGCCCCTACCACCCAGCAGCGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000434521.1
CDS-3UTR GCA 90 bp TTTTCACTTGTGTTTGTAGACATGCTCCTCCCACACTCAGGAGAGAGGAAAGGGACCGCCGTGGGCTGCTaGGCTTGGCCGCTGCCGCGT +
Preference number: 4 (lower is better)
Translates to: FSLVFVDMLLPHSGERKGTAVGC*AWPLPR
Trigger: ACGCGGCAGCGGCCAAGCGCAGCAGCCCACGGCGGT...CCCTTTCCTCTCTCCTGAGTGTGGGAGGAGCATGTCTACAAACACAAGTGAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR GCA 90 bp GACCCAAATGATCTCAGTACCTGCTTCAGGGTTCCAAGTCAATGTCCAGGTGTACCGCAGCGCTGCTGGTaGCCACAAGCCGGCGCAGCG +
Preference number: 4 (lower is better)
Translates to: DPNDLSTCFRVPSQCPGVPQRCW*PQAGAA
Trigger: CGCTGCGCCGGCTTGTGGGCACCAGCAGCGCTGCGG...TACACCTGGACATTGACTTGGAACCCTGAAGCAGGTACTGAGATCATTTGGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR GCA 90 bp GGCACGACCACAGTAGCCGCACTTGAAAGGCCGGTCACTAGAGTGAGTGACCACGGTCTGTCGGGGTTCTaGGTGCACACGTGCATCTGT +
Preference number: 4 (lower is better)
Translates to: GTTTVAALERPVTRVSDHGLSGF*VHTCIC
Trigger: ACAGATGCACGTGTGCACGCAGAACCCCGACAGACC...GTGGTCACTCACTCTAGTGACCGGCCTTTCAAGTGCGGCTACTGTGGTCGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434521.1
CDS-3UTR GCA 90 bp GGCACGACCACAGTAGCCGCACTTGAAAGGCCGGTCACTAGAGTGAGTGACCACTACTCCCAGAGATGCTaGGTGTTCCTCACGGCGCCT +
Preference number: 4 (lower is better)
Translates to: GTTTVAALERPVTRVSDHYSQRC*VFLTAP
Trigger: AGGCGCCGTGAGGAACACGCAGCATCTCTGGGAGTA...GTGGTCACTCACTCTAGTGACCGGCCTTTCAAGTGCGGCTACTGTGGTCGTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434521.1
CDS-3UTR CCA 90 bp AACAACGGAGCGCTGCTGGGTGGTAGGGGCGAGTTTGCTGCTTTTGTTGAAGGGTGCCTGCACCTTCTCTaGGGGCAGAAGCACGCCTTG +
Preference number: 4 (lower is better)
Translates to: NNGALLGGRGEFAAFVEGCLHLL*GQKHAL
Trigger: CAAGGCGTGCTTCTGCCCCCAGAGAAGGTGCAGGCA...CCCTTCAACAAAAGCAGCAAACTCGCCCCTACCACCCAGCAGCGCTCCGTTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000434521.1
CDS-3UTR CCA 90 bp ACTCCGAGTGGAGCTGGCTTGTGGAAGTTGGGCTTGCCAGGACTCGCTGGTTTTCTGCTGCACGGAGTCTaGGGGAAAACAACGGAGCGC +
Preference number: 4 (lower is better)
Translates to: TPSGAGLWKLGLPGLAGFLLHGV*GKTTER
Trigger: GCGCTCCGTTGTTTTCCCCCAGACTCCGTGCAGCAG...AAAACCAGCGAGTCCTGGCAAGCCCAACTTCCACAAGCCAGCTCCACTCGGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000434521.1
CDS-3UTR CCA 90 bp CTCCGAGTGGAGCTGGCTTGTGGAAGTTGGGCTTGCCAGGACTCGCTGGTTTTTGGCTGGGAAAAGGACTaGGAGCAGTGGCCGCATTGG +
Preference number: 4 (lower is better)
Translates to: LRVELACGSWACQDSLVFGWEKD*EQWPHW
Trigger: CCAATGCGGCCACTGCTCCCAGTCCTTTTCCCAGCC...AAAAACCAGCGAGTCCTGGCAAGCCCAACTTCCACAAGCCAGCTCCACTCGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434521.1
CDS-3UTR GCA 90 bp GACCCAAATGATCTCAGTACCTGCTTCAGGGTTCCAAGTCAATGTCCAGGTGTATCAACCGCCGTGGGCTaGTGCGCTTGGCCGCTGCCG +
Preference number: 4 (lower is better)
Translates to: DPNDLSTCFRVPSQCPGVSTAVG*CAWPLP
Trigger: CGGCAGCGGCCAAGCGCAGCAGCCCACGGCGGTTGA...TACACCTGGACATTGACTTGGAACCCTGAAGCAGGTACTGAGATCATTTGGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR GCA 90 bp GGCACGACCACAGTAGCCGCACTTGAAAGGCCGGTCACTAGAGTGAGTGACCACAAGGTCCAATCCAGGTaGCTTGCTGGATCCTCTGCG +
Preference number: 4 (lower is better)
Translates to: GTTTVAALERPVTRVSDHKVQSR*LAGSSA
Trigger: CGCAGAGGATCCAGCAAGGCACCTGGATTGGACCTT...GTGGTCACTCACTCTAGTGACCGGCCTTTCAAGTGCGGCTACTGTGGTCGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434521.1
CDS-3UTR CCA 90 bp TTTTCACTTGTGTTTGTAGACATGCTCCTCCCACACTCAGGAGAGAGGAAAGGGCCGACTCAACCGCCGTaGGCTGCTGCGCTTGGCCGC +
Preference number: 4 (lower is better)
Translates to: FSLVFVDMLLPHSGERKGPTQPP*AAALGR
Trigger: GCGGCCAAGCGCAGCAGCCCACGGCGGTTGAGTCGG...CCCTTTCCTCTCTCCTGAGTGTGGGAGGAGCATGTCTACAAACACAAGTGAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CCA 90 bp GACCCAAATGATCTCAGTACCTGCTTCAGGGTTCCAAGTCAATGTCCAGGTGTACGAGGCACAGTTCCTTaGGGGGCAGCGGCTCGGCGG +
Preference number: 4 (lower is better)
Translates to: DPNDLSTCFRVPSQCPGVRGTVP*GAAARR
Trigger: CCGCCGAGCCGCTGCCCCCCAAGGAACTGTGCCTCG...TACACCTGGACATTGACTTGGAACCCTGAAGCAGGTACTGAGATCATTTGGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CCA 90 bp GAACTCCGAGTGGAGCTGGCTTGTGGAAGTTGGGCTTGCCAGGACTCGCTGGTTGGCAGAAGCACGCCTTaGAAAGGTCCAATCCAGGTG +
Preference number: 4 (lower is better)
Translates to: ELRVELACGSWACQDSLVGRSTP*KGPIQV
Trigger: CACCTGGATTGGACCTTTCCAAGGCGTGCTTCTGCC...AACCAGCGAGTCCTGGCAAGCCCAACTTCCACAAGCCAGCTCCACTCGGAGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434521.1
CDS-3UTR CCA 90 bp AACAACGGAGCGCTGCTGGGTGGTAGGGGCGAGTTTGCTGCTTTTGTTGAAGGGCTGGCTTGTGGAAGTTaGGCTTGCCAGGACTCGCTG +
Preference number: 4 (lower is better)
Translates to: NNGALLGGRGEFAAFVEGLACGS*ACQDSL
Trigger: CAGCGAGTCCTGGCAAGCCCAACTTCCACAAGCCAG...CCCTTCAACAAAAGCAGCAAACTCGCCCCTACCACCCAGCAGCGCTCCGTTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434521.1
CDS-3UTR GCA 90 bp TTTTCACTTGTGTTTGTAGACATGCTCCTCCCACACTCAGGAGAGAGGAAAGGGCTGCCGGTGGGTGCGTaGGGGTGTCTCGGTGAGCGT +
Preference number: 4 (lower is better)
Translates to: FSLVFVDMLLPHSGERKGLPVGA*GCLGER
Trigger: ACGCTCACCGAGACACCCGCACGCACCCACCGGCAG...CCCTTTCCTCTCTCCTGAGTGTGGGAGGAGCATGTCTACAAACACAAGTGAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR GCA 90 bp AGTGGCCGCATTGGTAGGGTCTGTCGGGGTTCTGCGTGCACACGTGCATCTGTAATTTACTCCCAGAGATaGTGCGTGTTCCTCACGGCG +
Preference number: 4 (lower is better)
Translates to: SGRIGRVCRGSACTRASVIYSQR*CVFLTA
Trigger: CGCCGTGAGGAACACGCAGCATCTCTGGGAGTAAAT...TACAGATGCACGTGTGCACGCAGAACCCCGACAGACCCTACCAATGCGGCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434521.1
CDS-3UTR CCA 90 bp ACAACGGAGCGCTGCTGGGTGGTAGGGGCGAGTTTGCTGCTTTTGTTGAAGGGCCTCAGTTCTGAAGGCTaGGAAAAGGACTGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: TTERCWVVGASLLLLLKGLSSEG*EKDWEQ
Trigger: CTGCTCCCAGTCCTTTTCCCAGCCTTCAGAACTGAG...GCCCTTCAACAAAAGCAGCAAACTCGCCCCTACCACCCAGCAGCGCTCCGTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000434521.1
CDS-3UTR CCA 90 bp TTTTCACTTGTGTTTGTAGACATGCTCCTCCCACACTCAGGAGAGAGGAAAGGGTTCCGTGGTCCCCGCTaGGGCAGCCAGTGTCAGGCC +
Preference number: 4 (lower is better)
Translates to: FSLVFVDMLLPHSGERKGFRGPR*GSQCQA
Trigger: GGCCTGACACTGGCTGCCCCAGCGGGGACCACGGAA...CCCTTTCCTCTCTCCTGAGTGTGGGAGGAGCATGTCTACAAACACAAGTGAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR TCA 90 bp GACCCAAATGATCTCAGTACCTGCTTCAGGGTTCCAAGTCAATGTCCAGGTGTAAGGCTGGGTCCACTTTaGGGAAGGCCGAACCGCCGG +
Preference number: 4 (lower is better)
Translates to: DPNDLSTCFRVPSQCPGVRLGPL*GRPNRR
Trigger: CCGGCGGTTCGGCCTTCCTCAAAGTGGACCCAGCCT...TACACCTGGACATTGACTTGGAACCCTGAAGCAGGTACTGAGATCATTTGGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR TCA 90 bp AACTCCGAGTGGAGCTGGCTTGTGGAAGTTGGGCTTGCCAGGACTCGCTGGTTTGTGGTTCCTCAGTTCTaGAGGCTGGGAAAAGGACTG +
Preference number: 4 (lower is better)
Translates to: NSEWSWLVEVGLARTRWFVVPQF*RLGKGL
Trigger: CAGTCCTTTTCCCAGCCTTCAGAACTGAGGAACCAC...AAACCAGCGAGTCCTGGCAAGCCCAACTTCCACAAGCCAGCTCCACTCGGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434521.1
CDS-3UTR TCA 90 bp GGTAGCATTGACTCAGCGAAGGCTCTCACTCTGCTTCCGTGGTCCCCGCTGGGGTTGGTTTTCTGGGACTaGTTGAAAGTTGCTCAGAGG +
Preference number: 4 (lower is better)
Translates to: GSIDSAKALTLLPWSPLGLVFWD*LKVAQR
Trigger: CCTCTGAGCAACTTTCAATCAGTCCCAGAAAACCAA...CCCCAGCGGGGACCACGGAAGCAGAGTGAGAGCCTTCGCTGAGTCAATGCTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR TCA 90 bp GGTAGCATTGACTCAGCGAAGGCTCTCACTCTGCTTCCGTGGTCCCCGCTGGGGATTCACACTTCCCAGTaGCGCACATTGTTTGCAAAC +
Preference number: 4 (lower is better)
Translates to: GSIDSAKALTLLPWSPLGIHTSQ*RTLFAN
Trigger: GTTTGCAAACAATGTGCGTCACTGGGAAGTGTGAAT...CCCCAGCGGGGACCACGGAAGCAGAGTGAGAGCCTTCGCTGAGTCAATGCTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR GCA 90 bp GCAATTTCTACCACCCATTTGCTGTATCCCAGGGGACTGTGTGTCCACTTTAAAGCCCTTGAGCGGGCCTaGGCCTCCGTGAGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: AISTTHLLYPRGLCVHFKALERA*ASVREE
Trigger: CTCTTCCCTCACGGAGGCGCAGGCCCGCTCAAGGGC...TTTAAAGTGGACACACAGTCCCCTGGGATACAGCAAATGGGTGGTAGAAATTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR GCA 90 bp GACCCAAATGATCTCAGTACCTGCTTCAGGGTTCCAAGTCAATGTCCAGGTGTACTCACGGCGCCTGCCTaGACCTTCTCTGGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: DPNDLSTCFRVPSQCPGVLTAPA*TFSGGR
Trigger: TCTGCCCCCAGAGAAGGTGCAGGCAGGCGCCGTGAG...TACACCTGGACATTGACTTGGAACCCTGAAGCAGGTACTGAGATCATTTGGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR GCA 90 bp AGATGCCAGTCACTGAACTCCGAGTGGAGCTGGCTTGTGGAAGTTGGGCTTGCCTTCTGCGTGCACACGTaGATCTGTAAGAGGATCCGC +
Preference number: 4 (lower is better)
Translates to: RCQSLNSEWSWLVEVGLAFCVHT*ICKRIR
Trigger: GCGGATCCTCTTACAGATGCACGTGTGCACGCAGAA...GGCAAGCCCAACTTCCACAAGCCAGCTCCACTCGGAGTTCAGTGACTGGCATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434521.1
CDS-3UTR CCA 90 bp TTGATAAAATTAGCTGCTCCTGGGCTATCTGTTCTAACCACAACCTTCTCCATGGTGGGCTGCTGCGCTTaGCCGCTGCCGCGTCCTGGC +
Preference number: 4 (lower is better)
Translates to: LIKLAAPGLSVLTTTFSMVGCCA*PLPRPG
Trigger: GCCAGGACGCGGCAGCGGCCAAGCGCAGCAGCCCAC...CATGGAGAAGGTTGTGGTTAGAACAGATAGCCCAGGAGCAGCTAATTTTATCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR CAA 72 bp CATGGAAATGGGATGCGTCTGGGGCTGAAGGTAGCATaGACTCAGCGAAGGCTCTCACTCTGCTTCCGTGGT +
Preference number: 4 (lower is better)
Translates to: HGNGMRLGLKVA*TQRRLSLCFRG
Trigger: ACCACGGAAGCAGAGTGAGAGCCTTCGCTGAGTCAATGCTACCTTCAGCCCCAGACGCATCCCATTTCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR TCA 90 bp GGTAGCATTGACTCAGCGAAGGCTCTCACTCTGCTTCCGTGGTCCCCGCTGGGGTTTCTGGTCCCCAGATaGATTTACCTCTCTCAGATT +
Preference number: 4 (lower is better)
Translates to: GSIDSAKALTLLPWSPLGFLVPR*IYLSQI
Trigger: AATCTGAGAGAGGTAAATTCATCTGGGGACCAGAAA...CCCCAGCGGGGACCACGGAAGCAGAGTGAGAGCCTTCGCTGAGTCAATGCTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR GCA 90 bp ACAACGGAGCGCTGCTGGGTGGTAGGGGCGAGTTTGCTGCTTTTGTTGAAGGGCCCACATTTCCAAAGATaGCAGTCACTGAACTCCGAG +
Preference number: 4 (lower is better)
Translates to: TTERCWVVGASLLLLLKGPHFQR*QSLNSE
Trigger: CTCGGAGTTCAGTGACTGGCATCTTTGGAAATGTGG...GCCCTTCAACAAAAGCAGCAAACTCGCCCCTACCACCCAGCAGCGCTCCGTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434521.1
CDS-3UTR CCA 90 bp ATCATCATTCCCATCAACCTCTGTGGGAATAAGCGCAGAATGTCCTTATTTTTCGCCCGGGGCCGGAGGTaGCGCCGAGGCACAGTTCCT +
Preference number: 4 (lower is better)
Translates to: IIIPINLCGNKRRMSLFFARGRR*RRGTVP
Trigger: AGGAACTGTGCCTCGGCGCCACCTCCGGCCCCGGGC...GAAAAATAAGGACATTCTGCGCTTATTCCCACAGAGGTTGATGGGAATGATGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CCA 90 bp CGTGGTTCCTCAGTTCTGAAGGCTGGGAAAAGGACTGGGAGCAGTGGCCGCATTTCACTGAACTCCGAGTaGAGCTGGCTTGTGGAAGTT +
Preference number: 4 (lower is better)
Translates to: RGSSVLKAGKRTGSSGRISLNSE*SWLVEV
Trigger: AACTTCCACAAGCCAGCTCCACTCGGAGTTCAGTGA...AATGCGGCCACTGCTCCCAGTCCTTTTCCCAGCCTTCAGAACTGAGGAACCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434521.1
CDS-3UTR CCA 90 bp TTTTCACTTGTGTTTGTAGACATGCTCCTCCCACACTCAGGAGAGAGGAAAGGGTGGTGTCGGCTCAGCTaGGTGGCCTGCGTGAAGCTC +
Preference number: 4 (lower is better)
Translates to: FSLVFVDMLLPHSGERKGWCRLS*VACVKL
Trigger: GAGCTTCACGCAGGCCACCCAGCTGAGCCGACACCA...CCCTTTCCTCTCTCCTGAGTGTGGGAGGAGCATGTCTACAAACACAAGTGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR TCA 90 bp GCAATTTCTACCACCCATTTGCTGTATCCCAGGGGACTGTGTGTCCACTTTAAAGCTGGGTGGCCTGCGTaGAGCTCCTCTCACACCTCT +
Preference number: 4 (lower is better)
Translates to: AISTTHLLYPRGLCVHFKAGWPA*SSSHTS
Trigger: AGAGGTGTGAGAGGAGCTTCACGCAGGCCACCCAGC...TTTAAAGTGGACACACAGTCCCCTGGGATACAGCAAATGGGTGGTAGAAATTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR GCA 90 bp ATCATCATTCCCATCAACCTCTGTGGGAATAAGCGCAGAATGTCCTTATTTTTCGCTGCGCTTGGCCGCTaGCGCGTCCTGGCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: IIIPINLCGNKRRMSLFFAALGR*RVLAPW
Trigger: CCAAGGAGCCAGGACGCGGCAGCGGCCAAGCGCAGC...GAAAAATAAGGACATTCTGCGCTTATTCCCACAGAGGTTGATGGGAATGATGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR GCA 90 bp TGGGATATTGAGATTTTTCTAGAAATGCAAAGGTCTGCAGCTCCATCTCTCATCGCGAACACCGGCAGCTaGGACACCGGCAGGGCCGAG +
Preference number: 4 (lower is better)
Translates to: WDIEIFLEMQRSAAPSLIANTGS*DTGRAE
Trigger: CTCGGCCCTGCCGGTGTCGCAGCTGCCGGTGTTCGC...GATGAGAGATGGAGCTGCAGACCTTTGCATTTCTAGAAAAATCTCAATATCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CCA 90 bp CGTAATGACTCCATTGATGCCTGGAAAGTAACTCACTTAGCATTCAGTCAGAACGCCGCTGCCGCGTCCTaGCTCCTTGGTTCCACGCTC +
Preference number: 4 (lower is better)
Translates to: RNDSIDAWKVTHLAFSQNAAAAS*LLGSTL
Trigger: GAGCGTGGAACCAAGGAGCCAGGACGCGGCAGCGGC...GTTCTGACTGAATGCTAAGTGAGTTACTTTCCAGGCATCAATGGAGTCATTACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CCA 90 bp GAGCCAAACCCTGATTCAGCTCTGACAGACTACCTTTCTTATCTTAAATATCCTGAGTGCGGACGGACCTaGGCGCCCGACTCAACCGCC +
Preference number: 4 (lower is better)
Translates to: EPNPDSALTDYLSYLKYPECGRT*APDSTA
Trigger: GGCGGTTGAGTCGGGCGCCCAGGTCCGTCCGCACTC...AGGATATTTAAGATAAGAAAGGTAGTCTGTCAGAGCTGAATCAGGGTTTGGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CCA 90 bp GCAATTTCTACCACCCATTTGCTGTATCCCAGGGGACTGTGTGTCCACTTTAAAGCGCAGCGAGTGCAGTaGCCCATGCATAGGGCACTC +
Preference number: 4 (lower is better)
Translates to: AISTTHLLYPRGLCVHFKAQRVQ*PMHRAL
Trigger: GAGTGCCCTATGCATGGGCCACTGCACTCGCTGCGC...TTTAAAGTGGACACACAGTCCCCTGGGATACAGCAAATGGGTGGTAGAAATTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CCA 90 bp ATCTGTAAGAGGATCCGCTGGGTGAAAGTCTTAAAGCACTGCCCACATTTCCAAATCCAGGTGCCTTGCTaGATCCTCTGCGCCGCGCAG +
Preference number: 4 (lower is better)
Translates to: ICKRIRWVKVLKHCPHFQIQVPC*ILCAAQ
Trigger: CTGCGCGGCGCAGAGGATCCAGCAAGGCACCTGGAT...TTGGAAATGTGGGCAGTGCTTTAAGACTTTCACCCAGCGGATCCTCTTACAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434521.1
3UTR CAA 72 bp GACAATGCCCACATGTGGATCAACAGGGACTGTGGGTaGGCAGACTTTTGCTCTAAGATGGCTGCTTTCCCC +
Preference number: 4 (lower is better)
Translates to: DNAHMWINRDCG*ADFCSKMAAFP
Trigger: GGGGAAAGCAGCCATCTTAGAGCAAAAGTCTGCCAACCCACAGTCCCTGTTGATCCACATGTGGGCATTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR TCA 90 bp TTCAGAGAAAGTAAGTCTACAAGTGCTGATTTTGTTAACATTAGACAATGCCCACACCACCACCGCACTTaGCGGGCCCGGGGCCGGAGG +
Preference number: 4 (lower is better)
Translates to: FRESKSTSADFVNIRQCPHHHRT*RARGRR
Trigger: CCTCCGGCCCCGGGCCCGTCAAGTGCGGTGGTGGTG...TGGGCATTGTCTAATGTTAACAAAATCAGCACTTGTAGACTTACTTTCTCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR GCA 90 bp TTAAATCCTGATTCAATGGGCCCAGACTTATCCAGAAGAGAGAAGTTCCTGCTGCCAATCCAGGTGCCTTaGTGGATCCTCTGCGCCGCG +
Preference number: 4 (lower is better)
Translates to: LNPDSMGPDLSRREKFLLPIQVP*WILCAA
Trigger: CGCGGCGCAGAGGATCCAGCAAGGCACCTGGATTGG...CAGCAGGAACTTCTCTCTTCTGGATAAGTCTGGGCCCATTGAATCAGGATTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434521.1
CDS-3UTR CCA 90 bp CGTAATGACTCCATTGATGCCTGGAAAGTAACTCACTTAGCATTCAGTCAGAACGGCCGGGCACAGTACTaGTGCAGAGGCACACCTCGC +
Preference number: 4 (lower is better)
Translates to: RNDSIDAWKVTHLAFSQNGRAQY*CRGTPR
Trigger: GCGAGGTGTGCCTCTGCACCAGTACTGTGCCCGGCC...GTTCTGACTGAATGCTAAGTGAGTTACTTTCCAGGCATCAATGGAGTCATTACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CCA 90 bp CGTGGTTCCTCAGTTCTGAAGGCTGGGAAAAGGACTGGGAGCAGTGGCCGCATTTGTAAGAGGATCCGCTaGGTGAAAGTCTTAAAGCAC +
Preference number: 4 (lower is better)
Translates to: RGSSVLKAGKRTGSSGRICKRIR*VKVLKH
Trigger: GTGCTTTAAGACTTTCACCCAGCGGATCCTCTTACA...AATGCGGCCACTGCTCCCAGTCCTTTTCCCAGCCTTCAGAACTGAGGAACCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434521.1
CDS-3UTR CCA 90 bp GACCCAAATGATCTCAGTACCTGCTTCAGGGTTCCAAGTCAATGTCCAGGTGTACTAAACGCAGGCTGCTaGGTACACTCAGAGGGACCC +
Preference number: 4 (lower is better)
Translates to: DPNDLSTCFRVPSQCPGVLNAGC*VHSEGP
Trigger: GGGTCCCTCTGAGTGTACCCAGCAGCCTGCGTTTAG...TACACCTGGACATTGACTTGGAACCCTGAAGCAGGTACTGAGATCATTTGGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR TCA 90 bp GTTTTCCTTAATTCGTTAGTCATCACCTTAGCCTCTGCATTTAAACTGGGGGAATGCGCTACATGCCCCTaGGCAGCGCGGGAGGAGAGT +
Preference number: 4 (lower is better)
Translates to: VFLNSLVITLASAFKLGECATCP*AAREES
Trigger: ACTCTCCTCCCGCGCTGCTCAGGGGCATGTAGCGCA...TTCCCCCAGTTTAAATGCAGAGGCTAAGGTGATGACTAACGAATTAAGGAAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR GCA 90 bp TTGATAAAATTAGCTGCTCCTGGGCTATCTGTTCTAACCACAACCTTCTCCATGCTGAAAACTCGGTGCTaGCGGTGGGTGCGTGCGGGT +
Preference number: 4 (lower is better)
Translates to: LIKLAAPGLSVLTTTFSMLKTRC*RWVRAG
Trigger: ACCCGCACGCACCCACCGGCAGCACCGAGTTTTCAG...CATGGAGAAGGTTGTGGTTAGAACAGATAGCCCAGGAGCAGCTAATTTTATCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR GCA 90 bp TTCAGAGAAAGTAAGTCTACAAGTGCTGATTTTGTTAACATTAGACAATGCCCACCAGCTCCTCTGCGCTaGAGCGGAAGCGCGGGGCGC +
Preference number: 4 (lower is better)
Translates to: FRESKSTSADFVNIRQCPPAPLR*SGSAGR
Trigger: GCGCCCCGCGCTTCCGCTGCAGCGCAGAGGAGCTGG...TGGGCATTGTCTAATGTTAACAAAATCAGCACTTGTAGACTTACTTTCTCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR GCA 90 bp CGTAATGACTCCATTGATGCCTGGAAAGTAACTCACTTAGCATTCAGTCAGAACCGGGCACAGTACTGGTaGAGAGGCACACCTCGCGAG +
Preference number: 4 (lower is better)
Translates to: RNDSIDAWKVTHLAFSQNRAQYW*RGTPRE
Trigger: CTCGCGAGGTGTGCCTCTGCACCAGTACTGTGCCCG...GTTCTGACTGAATGCTAAGTGAGTTACTTTCCAGGCATCAATGGAGTCATTACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR GCA 90 bp GAGAAAGTAAGTCTACAAGTGCTGATTTTGTTAACATTAGACAATGCCCACATGTCTGCGCCGCGCAGATaGCGTAGGCCAGGCCGGGCA +
Preference number: 4 (lower is better)
Translates to: EKVSLQVLILLTLDNAHMSAPRR*RRPGRA
Trigger: TGCCCGGCCTGGCCTACGGCATCTGCGCGGCGCAGA...CATGTGGGCATTGTCTAATGTTAACAAAATCAGCACTTGTAGACTTACTTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR GCA 90 bp TTGATAAAATTAGCTGCTCCTGGGCTATCTGTTCTAACCACAACCTTCTCCATGCCAATCCAGGTGCCTTaGTGGATCCTCTGCGCCGCG +
Preference number: 4 (lower is better)
Translates to: LIKLAAPGLSVLTTTFSMPIQVP*WILCAA
Trigger: CGCGGCGCAGAGGATCCAGCAAGGCACCTGGATTGG...CATGGAGAAGGTTGTGGTTAGAACAGATAGCCCAGGAGCAGCTAATTTTATCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR GCA 90 bp GACCCAAATGATCTCAGTACCTGCTTCAGGGTTCCAAGTCAATGTCCAGGTGTACTCCTAAACGCAGGCTaGTGGGTACACTCAGAGGGA +
Preference number: 4 (lower is better)
Translates to: DPNDLSTCFRVPSQCPGVLLNAG*WVHSEG
Trigger: TCCCTCTGAGTGTACCCAGCAGCCTGCGTTTAGGAG...TACACCTGGACATTGACTTGGAACCCTGAAGCAGGTACTGAGATCATTTGGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CCA 90 bp CGTAATGACTCCATTGATGCCTGGAAAGTAACTCACTTAGCATTCAGTCAGAACTGCAAGCGAGAAAATTaGGAGGCCCGCGGAGGGCGC +
Preference number: 4 (lower is better)
Translates to: RNDSIDAWKVTHLAFSQNCKREN*EARGGR
Trigger: GCGCCCTCCGCGGGCCTCCCAATTTTCTCGCTTGCA...GTTCTGACTGAATGCTAAGTGAGTTACTTTCCAGGCATCAATGGAGTCATTACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CCA 90 bp TTCAGAGAAAGTAAGTCTACAAGTGCTGATTTTGTTAACATTAGACAATGCCCACGGCCGCAGCGCTGCTaGTGCCCACAAGCCGGCGCA +
Preference number: 4 (lower is better)
Translates to: FRESKSTSADFVNIRQCPRPQRC*CPQAGA
Trigger: TGCGCCGGCTTGTGGGCACCAGCAGCGCTGCGGCCG...TGGGCATTGTCTAATGTTAACAAAATCAGCACTTGTAGACTTACTTTCTCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CCA 90 bp TTGATAAAATTAGCTGCTCCTGGGCTATCTGTTCTAACCACAACCTTCTCCATGATCCAGGTGCCTTGCTaGATCCTCTGCGCCGCGCAG +
Preference number: 4 (lower is better)
Translates to: LIKLAAPGLSVLTTTFSMIQVPC*ILCAAQ
Trigger: CTGCGCGGCGCAGAGGATCCAGCAAGGCACCTGGAT...CATGGAGAAGGTTGTGGTTAGAACAGATAGCCCAGGAGCAGCTAATTTTATCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CCA 90 bp GCAATTTCTACCACCCATTTGCTGTATCCCAGGGGACTGTGTGTCCACTTTAAAGTGTGGGTTCGGATGTaGTTGTTGAGGGTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: AISTTHLLYPRGLCVHFKVWVRM*LLRVVA
Trigger: GGCCACCACCCTCAACAACCACATCCGAACCCACAC...TTTAAAGTGGACACACAGTCCCCTGGGATACAGCAAATGGGTGGTAGAAATTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR TCA 90 bp TTCAGAGAAAGTAAGTCTACAAGTGCTGATTTTGTTAACATTAGACAATGCCCAGTGCGGGTGTCTCGGTaGGCGTGCGGGTGCGCGAGA +
Preference number: 4 (lower is better)
Translates to: FRESKSTSADFVNIRQCPVRVSR*ACGCAR
Trigger: TCTCGCGCACCCGCACGCTCACCGAGACACCCGCAC...TGGGCATTGTCTAATGTTAACAAAATCAGCACTTGTAGACTTACTTTCTCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR TCA 90 bp CGTGGTTCCTCAGTTCTGAAGGCTGGGAAAAGGACTGGGAGCAGTGGCCGCATTGATTTGATTAAATCCTaGTTCAATGGGCCCAGACTT +
Preference number: 4 (lower is better)
Translates to: RGSSVLKAGKRTGSSGRIDLIKS*FNGPRL
Trigger: AAGTCTGGGCCCATTGAATCAGGATTTAATCAAATC...AATGCGGCCACTGCTCCCAGTCCTTTTCCCAGCCTTCAGAACTGAGGAACCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434521.1
CDS-3UTR TCA 90 bp GACCCAAATGATCTCAGTACCTGCTTCAGGGTTCCAAGTCAATGTCCAGGTGTAAAGGTAGACAGTCGCTaGGATGCTGCTGGGAGCTAT +
Preference number: 4 (lower is better)
Translates to: DPNDLSTCFRVPSQCPGVKVDSR*DAAGSY
Trigger: ATAGCTCCCAGCAGCATCTCAGCGACTGTCTACCTT...TACACCTGGACATTGACTTGGAACCCTGAAGCAGGTACTGAGATCATTTGGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR GCA 90 bp GAGCCAAACCCTGATTCAGCTCTGACAGACTACCTTTCTTATCTTAAATATCCTATAGTCCAGCTCCTCTaGGCTGCAGCGGAAGCGCGG +
Preference number: 4 (lower is better)
Translates to: EPNPDSALTDYLSYLKYPIVQLL*AAAEAR
Trigger: CCGCGCTTCCGCTGCAGCGCAGAGGAGCTGGACTAT...AGGATATTTAAGATAAGAAAGGTAGTCTGTCAGAGCTGAATCAGGGTTTGGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR GCA 90 bp ATCATCATTCCCATCAACCTCTGTGGGAATAAGCGCAGAATGTCCTTATTTTTCCGAAGGCTCTCACTCTaGTTCCGTGGTCCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: IIIPINLCGNKRRMSLFFRRLSL*FRGPRW
Trigger: CCAGCGGGGACCACGGAAGCAGAGTGAGAGCCTTCG...GAAAAATAAGGACATTCTGCGCTTATTCCCACAGAGGTTGATGGGAATGATGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CCA 90 bp CGTAATGACTCCATTGATGCCTGGAAAGTAACTCACTTAGCATTCAGTCAGAACGGGTCGCTGGTGTGCTaGTTGAGCGGGATGATCTCC +
Preference number: 4 (lower is better)
Translates to: RNDSIDAWKVTHLAFSQNGSLVC*LSGMIS
Trigger: GGAGATCATCCCGCTCAACCAGCACACCAGCGACCC...GTTCTGACTGAATGCTAAGTGAGTTACTTTCCAGGCATCAATGGAGTCATTACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CCA 90 bp GACCCAAATGATCTCAGTACCTGCTTCAGGGTTCCAAGTCAATGTCCAGGTGTAGTAAGCCTGTCTTTGTaGACAGACAGCCTAGGCTGG +
Preference number: 4 (lower is better)
Translates to: DPNDLSTCFRVPSQCPGVVSLSL*TDSLGW
Trigger: CCAGCCTAGGCTGTCTGTCCACAAAGACAGGCTTAC...TACACCTGGACATTGACTTGGAACCCTGAAGCAGGTACTGAGATCATTTGGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR GCA 90 bp TGGGAGAAACTAGAGAAGTGTACTAGATTGTTCAGAGAAAGTAAGTCTACAAGTCGAGAGTGTGCGCCCTaGGTGCGCTACATGCCCCTG +
Preference number: 4 (lower is better)
Translates to: WEKLEKCTRLFRESKSTSRECAP*VRYMPL
Trigger: CAGGGGCATGTAGCGCACGCAGGGCGCACACTCTCG...ACTTGTAGACTTACTTTCTCTGAACAATCTAGTACACTTCTCTAGTTTCTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR GCA 90 bp TGGGAGAAACTAGAGAAGTGTACTAGATTGTTCAGAGAAAGTAAGTCTACAAGTGGGTGCGCGAGAGTGTaGGCCCTGCGTGCGCTACAT +
Preference number: 4 (lower is better)
Translates to: WEKLEKCTRLFRESKSTSGCARV*ALRALH
Trigger: ATGTAGCGCACGCAGGGCGCACACTCTCGCGCACCC...ACTTGTAGACTTACTTTCTCTGAACAATCTAGTACACTTCTCTAGTTTCTCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR GCA 90 bp TGGGATATTGAGATTTTTCTAGAAATGCAAAGGTCTGCAGCTCCATCTCTCATCGAGTGCAGTGGCCCATaGATAGGGCACTCGCCGTTG +
Preference number: 4 (lower is better)
Translates to: WDIEIFLEMQRSAAPSLIECSGP*IGHSPL
Trigger: CAACGGCGAGTGCCCTATGCATGGGCCACTGCACTC...GATGAGAGATGGAGCTGCAGACCTTTGCATTTCTAGAAAAATCTCAATATCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR GCA 90 bp ATCTGTAAGAGGATCCGCTGGGTGAAAGTCTTAAAGCACTGCCCACATTTCCAATGTCGGGGTTCTGCGTaGACACGTGCATCTGTAAGA +
Preference number: 4 (lower is better)
Translates to: ICKRIRWVKVLKHCPHFQCRGSA*TRASVR
Trigger: TCTTACAGATGCACGTGTGCACGCAGAACCCCGACA...TTGGAAATGTGGGCAGTGCTTTAAGACTTTCACCCAGCGGATCCTCTTACAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434521.1
CDS-3UTR GCA 90 bp GCAATTTCTACCACCCATTTGCTGTATCCCAGGGGACTGTGTGTCCACTTTAAACAGTCGCTGAGATGCTaGTGGGAGCTATCAGCTCTT +
Preference number: 4 (lower is better)
Translates to: AISTTHLLYPRGLCVHFKQSLRC*WELSAL
Trigger: AAGAGCTGATAGCTCCCAGCAGCATCTCAGCGACTG...TTTAAAGTGGACACACAGTCCCCTGGGATACAGCAAATGGGTGGTAGAAATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR GCA 90 bp GACCCAAATGATCTCAGTACCTGCTTCAGGGTTCCAAGTCAATGTCCAGGTGTAACAACCTGCCCTTCCTaGCTGTTGCCATTTGTCCTA +
Preference number: 4 (lower is better)
Translates to: DPNDLSTCFRVPSQCPGVTTCPS*LLPFVL
Trigger: TAGGACAAATGGCAACAGGCAGGAAGGGCAGGTTGT...TACACCTGGACATTGACTTGGAACCCTGAAGCAGGTACTGAGATCATTTGGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CCA 90 bp TTCAGAGAAAGTAAGTCTACAAGTGCTGATTTTGTTAACATTAGACAATGCCCAACTCGGTGCTGCCGGTaGGTGCGTGCGGGTGTCTCG +
Preference number: 4 (lower is better)
Translates to: FRESKSTSADFVNIRQCPTRCCR*VRAGVS
Trigger: CGAGACACCCGCACGCACCCACCGGCAGCACCGAGT...TGGGCATTGTCTAATGTTAACAAAATCAGCACTTGTAGACTTACTTTCTCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CCA 90 bp TTGATAAAATTAGCTGCTCCTGGGCTATCTGTTCTAACCACAACCTTCTCCATGTGTCGCAACGGTTGTTaGGGTCGCTGGTGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: LIKLAAPGLSVLTTTFSMCRNGC*GRWCAG
Trigger: ACCAGCACACCAGCGACCCCAACAACCGTTGCGACA...CATGGAGAAGGTTGTGGTTAGAACAGATAGCCCAGGAGCAGCTAATTTTATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CCA 90 bp GAGCCAAACCCTGATTCAGCTCTGACAGACTACCTTTCTTATCTTAAATATCCTTGCCTGCACCTTCTCTaGGGGCAGAAGCACGCCTTG +
Preference number: 4 (lower is better)
Translates to: EPNPDSALTDYLSYLKYPCLHLL*GQKHAL
Trigger: CAAGGCGTGCTTCTGCCCCCAGAGAAGGTGCAGGCA...AGGATATTTAAGATAAGAAAGGTAGTCTGTCAGAGCTGAATCAGGGTTTGGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CCA 90 bp ATCATCATTCCCATCAACCTCTGTGGGAATAAGCGCAGAATGTCCTTATTTTTCACAACGGAGCGCTGCTaGGTGGTAGGGGCGAGTTTG +
Preference number: 4 (lower is better)
Translates to: IIIPINLCGNKRRMSLFFTTERC*VVGASL
Trigger: CAAACTCGCCCCTACCACCCAGCAGCGCTCCGTTGT...GAAAAATAAGGACATTCTGCGCTTATTCCCACAGAGGTTGATGGGAATGATGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CCA 90 bp ATCATCATTCCCATCAACCTCTGTGGGAATAAGCGCAGAATGTCCTTATTTTTCGGCTGGGAAAAGGACTaGGAGCAGTGGCCGCATTGG +
Preference number: 4 (lower is better)
Translates to: IIIPINLCGNKRRMSLFFGWEKD*EQWPHW
Trigger: CCAATGCGGCCACTGCTCCCAGTCCTTTTCCCAGCC...GAAAAATAAGGACATTCTGCGCTTATTCCCACAGAGGTTGATGGGAATGATGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CCA 90 bp TTGATAAAATTAGCTGCTCCTGGGCTATCTGTTCTAACCACAACCTTCTCCATGTTGGCTTGCACTCATTaGGCATCCGCTGGTGTCGGC +
Preference number: 4 (lower is better)
Translates to: LIKLAAPGLSVLTTTFSMLACTH*ASAGVG
Trigger: GCCGACACCAGCGGATGCCCAATGAGTGCAAGCCAA...CATGGAGAAGGTTGTGGTTAGAACAGATAGCCCAGGAGCAGCTAATTTTATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR CAA 72 bp GAAATGCAAAGGTCTGCAGCTCCATCTCTCATCCTATaGCACCCTGACTTTTCCCTGGCATTACCTTTCGTC +
Preference number: 4 (lower is better)
Translates to: EMQRSAAPSLIL*HPDFSLALPFV
Trigger: GACGAAAGGTAATGCCAGGGAAAAGTCAGGGTGCAATAGGATGAGAGATGGAGCTGCAGACCTTTGCATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR TCA 90 bp CGTAATGACTCCATTGATGCCTGGAAAGTAACTCACTTAGCATTCAGTCAGAACAAAGATGCCAGTCACTaGACTCCGAGTGGAGCTGGC +
Preference number: 4 (lower is better)
Translates to: RNDSIDAWKVTHLAFSQNKDASH*TPSGAG
Trigger: GCCAGCTCCACTCGGAGTTCAGTGACTGGCATCTTT...GTTCTGACTGAATGCTAAGTGAGTTACTTTCCAGGCATCAATGGAGTCATTACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR TCA 90 bp TTTTCACTTGTGTTTGTAGACATGCTCCTCCCACACTCAGGAGAGAGGAAAGGGTCAAGAGCCAAACCCTaGTTCAGCTCTGACAGACTA +
Preference number: 4 (lower is better)
Translates to: FSLVFVDMLLPHSGERKGSRAKP*FSSDRL
Trigger: TAGTCTGTCAGAGCTGAATCAGGGTTTGGCTCTTGA...CCCTTTCCTCTCTCCTGAGTGTGGGAGGAGCATGTCTACAAACACAAGTGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR TCA 90 bp GCAATTTCTACCACCCATTTGCTGTATCCCAGGGGACTGTGTGTCCACTTTAAACATCCTATTGCACCCTaGCTTTTCCCTGGCATTACC +
Preference number: 4 (lower is better)
Translates to: AISTTHLLYPRGLCVHFKHPIAP*LFPGIT
Trigger: GGTAATGCCAGGGAAAAGTCAGGGTGCAATAGGATG...TTTAAAGTGGACACACAGTCCCCTGGGATACAGCAAATGGGTGGTAGAAATTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR GCA 90 bp CGTAATGACTCCATTGATGCCTGGAAAGTAACTCACTTAGCATTCAGTCAGAACAAGGTCCAATCCAGGTaGCTTGCTGGATCCTCTGCG +
Preference number: 4 (lower is better)
Translates to: RNDSIDAWKVTHLAFSQNKVQSR*LAGSSA
Trigger: CGCAGAGGATCCAGCAAGGCACCTGGATTGGACCTT...GTTCTGACTGAATGCTAAGTGAGTTACTTTCCAGGCATCAATGGAGTCATTACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR GCA 90 bp ATCATCATTCCCATCAACCTCTGTGGGAATAAGCGCAGAATGTCCTTATTTTTCAAAACAACGGAGCGCTaGTGGGTGGTAGGGGCGAGT +
Preference number: 4 (lower is better)
Translates to: IIIPINLCGNKRRMSLFFKTTER*WVVGAS
Trigger: ACTCGCCCCTACCACCCAGCAGCGCTCCGTTGTTTT...GAAAAATAAGGACATTCTGCGCTTATTCCCACAGAGGTTGATGGGAATGATGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR GCA 90 bp TGGGATATTGAGATTTTTCTAGAAATGCAAAGGTCTGCAGCTCCATCTCTCATCCCCTCCAACACAACCTaGCCTTCCTGCCTGTTGCCA +
Preference number: 4 (lower is better)
Translates to: WDIEIFLEMQRSAAPSLIPSNTT*PSCLLP
Trigger: TGGCAACAGGCAGGAAGGGCAGGTTGTGTTGGAGGG...GATGAGAGATGGAGCTGCAGACCTTTGCATTTCTAGAAAAATCTCAATATCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CCA 90 bp GTTTTCCTTAATTCGTTAGTCATCACCTTAGCCTCTGCATTTAAACTGGGGGAACTGGCTTGTGGAAGTTaGGCTTGCCAGGACTCGCTG +
Preference number: 4 (lower is better)
Translates to: VFLNSLVITLASAFKLGELACGS*ACQDSL
Trigger: CAGCGAGTCCTGGCAAGCCCAACTTCCACAAGCCAG...TTCCCCCAGTTTAAATGCAGAGGCTAAGGTGATGACTAACGAATTAAGGAAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CCA 90 bp TTAAATCCTGATTCAATGGGCCCAGACTTATCCAGAAGAGAGAAGTTCCTGCTGAACTCCGAGTGGAGCTaGCTTGTGGAAGTTGGGCTT +
Preference number: 4 (lower is better)
Translates to: LNPDSMGPDLSRREKFLLNSEWS*LVEVGL
Trigger: AAGCCCAACTTCCACAAGCCAGCTCCACTCGGAGTT...CAGCAGGAACTTCTCTCTTCTGGATAAGTCTGGGCCCATTGAATCAGGATTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434521.1
CDS-3UTR TCA 90 bp TTTTCACTTGTGTTTGTAGACATGCTCCTCCCACACTCAGGAGAGAGGAAAGGGATACAGCAGCATGCATaGTCTCATTGGTCCTTTGCA +
Preference number: 4 (lower is better)
Translates to: FSLVFVDMLLPHSGERKGIQQHA*SHWSFA
Trigger: TGCAAAGGACCAATGAGATCATGCATGCTGCTGTAT...CCCTTTCCTCTCTCCTGAGTGTGGGAGGAGCATGTCTACAAACACAAGTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR GCA 90 bp GAGAAAGTAAGTCTACAAGTGCTGATTTTGTTAACATTAGACAATGCCCACATGGAACTGAAAACTCGGTaGTGCCGGTGGGTGCGTGCG +
Preference number: 4 (lower is better)
Translates to: EKVSLQVLILLTLDNAHMELKTR*CRWVRA
Trigger: CGCACGCACCCACCGGCAGCACCGAGTTTTCAGTTC...CATGTGGGCATTGTCTAATGTTAACAAAATCAGCACTTGTAGACTTACTTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR GCA 90 bp CGTAATGACTCCATTGATGCCTGGAAAGTAACTCACTTAGCATTCAGTCAGAACTATATCTCCCAGAGATaGTGCGTGTTCCTCACGGCG +
Preference number: 4 (lower is better)
Translates to: RNDSIDAWKVTHLAFSQNYISQR*CVFLTA
Trigger: CGCCGTGAGGAACACGCAGCATCTCTGGGAGATATA...GTTCTGACTGAATGCTAAGTGAGTTACTTTCCAGGCATCAATGGAGTCATTACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR GCA 90 bp GACCCAAATGATCTCAGTACCTGCTTCAGGGTTCCAAGTCAATGTCCAGGTGTATTTCATCCTGGGCAATaGATTGTAAGGGGATCCCAA +
Preference number: 4 (lower is better)
Translates to: DPNDLSTCFRVPSQCPGVFHPGQ*IVRGSQ
Trigger: TTGGGATCCCCTTACAATGCATTGCCCAGGATGAAA...TACACCTGGACATTGACTTGGAACCCTGAAGCAGGTACTGAGATCATTTGGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR GCA 90 bp CGTAATGACTCCATTGATGCCTGGAAAGTAACTCACTTAGCATTCAGTCAGAACTTCTGCGTGCACACGTaGATCTGTAAGAGGATCCGC +
Preference number: 4 (lower is better)
Translates to: RNDSIDAWKVTHLAFSQNFCVHT*ICKRIR
Trigger: GCGGATCCTCTTACAGATGCACGTGTGCACGCAGAA...GTTCTGACTGAATGCTAAGTGAGTTACTTTCCAGGCATCAATGGAGTCATTACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CCA 90 bp GAGCCAAACCCTGATTCAGCTCTGACAGACTACCTTTCTTATCTTAAATATCCTGGCAGAAGCACGCCTTaGAAAGGTCCAATCCAGGTG +
Preference number: 4 (lower is better)
Translates to: EPNPDSALTDYLSYLKYPGRSTP*KGPIQV
Trigger: CACCTGGATTGGACCTTTCCAAGGCGTGCTTCTGCC...AGGATATTTAAGATAAGAAAGGTAGTCTGTCAGAGCTGAATCAGGGTTTGGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CCA 90 bp TGGGAGAAACTAGAGAAGTGTACTAGATTGTTCAGAGAAAGTAAGTCTACAAGTTCATTGGGCATCCGCTaGTGTCGGCTCAGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: WEKLEKCTRLFRESKSTSSLGIR*CRLSWV
Trigger: CACCCAGCTGAGCCGACACCAGCGGATGCCCAATGA...ACTTGTAGACTTACTTTCTCTGAACAATCTAGTACACTTCTCTAGTTTCTCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR CAA 72 bp TCAGCTAGCAAAGCTATCAGGGTGGCAGAGAGATCATaGTTAAGGAAAACCTTCCCATGCCAGACATCAAGG +
Preference number: 4 (lower is better)
Translates to: SASKAIRVAERS*LRKTFPCQTSR
Trigger: CCTTGATGTCTGGCATGGGAAGGTTTTCCTTAACAATGATCTCTCTGCCACCCTGATAGCTTTGCTAGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR CAA 72 bp ATAAAAACCCAAGACCCAGGCCCTAATCCTGGTCTCTaGATACTGCTGCTAACAACCAATAGCCCAGTGAGT +
Preference number: 4 (lower is better)
Translates to: IKTQDPGPNPGL*ILLLTTNSPVS
Trigger: ACTCACTGGGCTATTGGTTGTTAGCAGCAGTATCAAGAGACCAGGATTAGGGCCTGGGTCTTGGGTTTTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR CAA 72 bp GTAGGCATGCATAGCCTTAATATGAGAGCAATGAATTaGCTCCTAAACGCAGGCTGCTGGGTACACTCAGAG +
Preference number: 4 (lower is better)
Translates to: VGMHSLNMRAMN*LLNAGCWVHSE
Trigger: CTCTGAGTGTACCCAGCAGCCTGCGTTTAGGAGCAAATTCATTGCTCTCATATTAAGGCTATGCATGCCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR TCA 90 bp TGGGATATTGAGATTTTTCTAGAAATGCAAAGGTCTGCAGCTCCATCTCTCATCACTGACACAGCAGAATaGAGGGCTGTACAGTGGGTC +
Preference number: 4 (lower is better)
Translates to: WDIEIFLEMQRSAAPSLITDTAE*RAVQWV
Trigger: GACCCACTGTACAGCCCTTCATTCTGCTGTGTCAGT...GATGAGAGATGGAGCTGCAGACCTTTGCATTTCTAGAAAAATCTCAATATCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR TCA 90 bp CGTAATGACTCCATTGATGCCTGGAAAGTAACTCACTTAGCATTCAGTCAGAACATTGAGCACCACTGTTaGACCACCAACAGGCTAGCT +
Preference number: 4 (lower is better)
Translates to: RNDSIDAWKVTHLAFSQNIEHHC*TTNRLA
Trigger: AGCTAGCCTGTTGGTGGTTCAACAGTGGTGCTCAAT...GTTCTGACTGAATGCTAAGTGAGTTACTTTCCAGGCATCAATGGAGTCATTACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR TCA 90 bp TGGGATATTGAGATTTTTCTAGAAATGCAAAGGTCTGCAGCTCCATCTCTCATCCTGGCCAGTTGTACCTaGCAGCTGATCTCTGGGTTT +
Preference number: 4 (lower is better)
Translates to: WDIEIFLEMQRSAAPSLILASCT*QLISGF
Trigger: AAACCCAGAGATCAGCTGTCAGGTACAACTGGCCAG...GATGAGAGATGGAGCTGCAGACCTTTGCATTTCTAGAAAAATCTCAATATCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR GCA 90 bp TGGGATATTGAGATTTTTCTAGAAATGCAAAGGTCTGCAGCTCCATCTCTCATCGGAAACCTCCCGACCTaGAAGCGAGAAAATTGGGAG +
Preference number: 4 (lower is better)
Translates to: WDIEIFLEMQRSAAPSLIGNLPT*KRENWE
Trigger: CTCCCAATTTTCTCGCTTGCAGGTCGGGAGGTTTCC...GATGAGAGATGGAGCTGCAGACCTTTGCATTTCTAGAAAAATCTCAATATCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR GCA 90 bp GAGAAAGTAAGTCTACAAGTGCTGATTTTGTTAACATTAGACAATGCCCACATGATCTCCCAGAGATGCTaGGTGTTCCTCACGGCGCCT +
Preference number: 4 (lower is better)
Translates to: EKVSLQVLILLTLDNAHMISQRC*VFLTAP
Trigger: AGGCGCCGTGAGGAACACGCAGCATCTCTGGGAGAT...CATGTGGGCATTGTCTAATGTTAACAAAATCAGCACTTGTAGACTTACTTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR GCA 90 bp GAGCCAAACCCTGATTCAGCTCTGACAGACTACCTTTCTTATCTTAAATATCCTTGTCGGGGTTCTGCGTaGACACGTGCATCTGTAAGA +
Preference number: 4 (lower is better)
Translates to: EPNPDSALTDYLSYLKYPCRGSA*TRASVR
Trigger: TCTTACAGATGCACGTGTGCACGCAGAACCCCGACA...AGGATATTTAAGATAAGAAAGGTAGTCTGTCAGAGCTGAATCAGGGTTTGGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR GCA 90 bp TGGGAGAAACTAGAGAAGTGTACTAGATTGTTCAGAGAAAGTAAGTCTACAAGTGGTCTGTCGGGGTTCTaGGTGCACACGTGCATCTGT +
Preference number: 4 (lower is better)
Translates to: WEKLEKCTRLFRESKSTSGLSGF*VHTCIC
Trigger: ACAGATGCACGTGTGCACGCAGAACCCCGACAGACC...ACTTGTAGACTTACTTTCTCTGAACAATCTAGTACACTTCTCTAGTTTCTCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CCA 90 bp GAGAAAGTAAGTCTACAAGTGCTGATTTTGTTAACATTAGACAATGCCCACATGGTGCTGCAGGTAGGCTaGGTCCACTTTGAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: EKVSLQVLILLTLDNAHMVLQVG*VHFEEG
Trigger: GCCTTCCTCAAAGTGGACCCAGCCTACCTGCAGCAC...CATGTGGGCATTGTCTAATGTTAACAAAATCAGCACTTGTAGACTTACTTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CCA 90 bp TTCAGAGAAAGTAAGTCTACAAGTGCTGATTTTGTTAACATTAGACAATGCCCACTGCTGCACGGAGTCTaGGGGAAAACAACGGAGCGC +
Preference number: 4 (lower is better)
Translates to: FRESKSTSADFVNIRQCPLLHGV*GKTTER
Trigger: GCGCTCCGTTGTTTTCCCCCAGACTCCGTGCAGCAG...TGGGCATTGTCTAATGTTAACAAAATCAGCACTTGTAGACTTACTTTCTCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CCA 90 bp TTGATAAAATTAGCTGCTCCTGGGCTATCTGTTCTAACCACAACCTTCTCCATGTCACTGAACTCCGAGTaGAGCTGGCTTGTGGAAGTT +
Preference number: 4 (lower is better)
Translates to: LIKLAAPGLSVLTTTFSMSLNSE*SWLVEV
Trigger: AACTTCCACAAGCCAGCTCCACTCGGAGTTCAGTGA...CATGGAGAAGGTTGTGGTTAGAACAGATAGCCCAGGAGCAGCTAATTTTATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CCA 90 bp CGTAATGACTCCATTGATGCCTGGAAAGTAACTCACTTAGCATTCAGTCAGAACTGGAAGACATGGAAATaGGATGCGTCTGGGGCTGAA +
Preference number: 4 (lower is better)
Translates to: RNDSIDAWKVTHLAFSQNWKTWK*DASGAE
Trigger: TTCAGCCCCAGACGCATCCCATTTCCATGTCTTCCA...GTTCTGACTGAATGCTAAGTGAGTTACTTTCCAGGCATCAATGGAGTCATTACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CCA 90 bp GAGCCAAACCCTGATTCAGCTCTGACAGACTACCTTTCTTATCTTAAATATCCTCAGTTTGGCTCTGTCTaGCCAGTTGTACCTGACAGC +
Preference number: 4 (lower is better)
Translates to: EPNPDSALTDYLSYLKYPQFGSV*PVVPDS
Trigger: GCTGTCAGGTACAACTGGCCAGACAGAGCCAAACTG...AGGATATTTAAGATAAGAAAGGTAGTCTGTCAGAGCTGAATCAGGGTTTGGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR TCA 90 bp GACCCAAATGATCTCAGTACCTGCTTCAGGGTTCCAAGTCAATGTCCAGGTGTATTTTCTGGGACTGATTaGAAGTTGCTCAGAGGAAAT +
Preference number: 4 (lower is better)
Translates to: DPNDLSTCFRVPSQCPGVFSGTD*KLLRGN
Trigger: ATTTCCTCTGAGCAACTTTCAATCAGTCCCAGAAAA...TACACCTGGACATTGACTTGGAACCCTGAAGCAGGTACTGAGATCATTTGGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR TCA 90 bp TTGATAAAATTAGCTGCTCCTGGGCTATCTGTTCTAACCACAACCTTCTCCATGGTGACCCAATTTCATTaGGCACCACTGTTGAACCAC +
Preference number: 4 (lower is better)
Translates to: LIKLAAPGLSVLTTTFSMVTQFH*APLLNH
Trigger: GTGGTTCAACAGTGGTGCTCAATGAAATTGGGTCAC...CATGGAGAAGGTTGTGGTTAGAACAGATAGCCCAGGAGCAGCTAATTTTATCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR TCA 90 bp TTTTCACTTGTGTTTGTAGACATGCTCCTCCCACACTCAGGAGAGAGGAAAGGGTCCTTACTACTTTCATaGCCAGGAGATAGTAAGAAC +
Preference number: 4 (lower is better)
Translates to: FSLVFVDMLLPHSGERKGSLLLS*PGDSKN
Trigger: GTTCTTACTATCTCCTGGTCATGAAAGTAGTAAGGA...CCCTTTCCTCTCTCCTGAGTGTGGGAGGAGCATGTCTACAAACACAAGTGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR TCA 90 bp GCAATTTCTACCACCCATTTGCTGTATCCCAGGGGACTGTGTGTCCACTTTAAACCTATGAGGACACAATaGTGTCATGATCTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: AISTTHLLYPRGLCVHFKPMRTQ*CHDLFL
Trigger: CAGGAAAAGATCATGACATCATTGTGTCCTCATAGG...TTTAAAGTGGACACACAGTCCCCTGGGATACAGCAAATGGGTGGTAGAAATTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR GCA 90 bp TTCAGAGAAAGTAAGTCTACAAGTGCTGATTTTGTTAACATTAGACAATGCCCATTGGGGTCGCTGGTGTaGTGGTTGAGCGGGATGATC +
Preference number: 4 (lower is better)
Translates to: FRESKSTSADFVNIRQCPLGSLV*WLSGMI
Trigger: GATCATCCCGCTCAACCAGCACACCAGCGACCCCAA...TGGGCATTGTCTAATGTTAACAAAATCAGCACTTGTAGACTTACTTTCTCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR GCA 90 bp TTTTCACTTGTGTTTGTAGACATGCTCCTCCCACACTCAGGAGAGAGGAAAGGGACCACACAGTATCCTTaGCTTTTAGTAGTGAGTTCA +
Preference number: 4 (lower is better)
Translates to: FSLVFVDMLLPHSGERKGTTQYP*LLVVSS
Trigger: TGAACTCACTACTAAAAGGCAAGGATACTGTGTGGT...CCCTTTCCTCTCTCCTGAGTGTGGGAGGAGCATGTCTACAAACACAAGTGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR GCA 90 bp TTGATAAAATTAGCTGCTCCTGGGCTATCTGTTCTAACCACAACCTTCTCCATGTTTCTACCACCCATTTaGTGTATCCCAGGGGACTGT +
Preference number: 4 (lower is better)
Translates to: LIKLAAPGLSVLTTTFSMFLPPI*CIPGDC
Trigger: ACAGTCCCCTGGGATACAGCAAATGGGTGGTAGAAA...CATGGAGAAGGTTGTGGTTAGAACAGATAGCCCAGGAGCAGCTAATTTTATCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR GCA 90 bp GTTTTCCTTAATTCGTTAGTCATCACCTTAGCCTCTGCATTTAAACTGGGGGAACTGCTGTTCTGGAAATaGCCTCTTTGTGAGACGTGC +
Preference number: 4 (lower is better)
Translates to: VFLNSLVITLASAFKLGELLFWK*PLCETC
Trigger: GCACGTCTCACAAAGAGGGCATTTCCAGAACAGCAG...TTCCCCCAGTTTAAATGCAGAGGCTAAGGTGATGACTAACGAATTAAGGAAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CCA 90 bp GAGAAAGTAAGTCTACAAGTGCTGATTTTGTTAACATTAGACAATGCCCACATGAGTGGAGCTGGCTTGTaGAAGTTGGGCTTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: EKVSLQVLILLTLDNAHMSGAGL*KLGLPG
Trigger: TCCTGGCAAGCCCAACTTCCACAAGCCAGCTCCACT...CATGTGGGCATTGTCTAATGTTAACAAAATCAGCACTTGTAGACTTACTTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CCA 90 bp ATCATCATTCCCATCAACCTCTGTGGGAATAAGCGCAGAATGTCCTTATTTTTCGCTTTCCCCAACATGTaGCAATCACCTGATACGGCA +
Preference number: 4 (lower is better)
Translates to: IIIPINLCGNKRRMSLFFAFPNM*QSPDTA
Trigger: TGCCGTATCAGGTGATTGCCACATGTTGGGGAAAGC...GAAAAATAAGGACATTCTGCGCTTATTCCCACAGAGGTTGATGGGAATGATGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR CAA 72 bp ACAACCTTCTCCATGGTTCCTCCTCTCAAAGTCTCCTaGTCTGGGCTATTTTCACTTGTGTTTGTAGACATG +
Preference number: 4 (lower is better)
Translates to: TTFSMVPPLKVS*SGLFSLVFVDM
Trigger: CATGTCTACAAACACAAGTGAAAATAGCCCAGACAAGGAGACTTTGAGAGGAGGAACCATGGAGAAGGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR CAA 72 bp CTGGCAAATTTTACGACTGCAATTTCTACCACCCATTaGCTGTATCCCAGGGGACTGTGTGTCCACTTTAAA +
Preference number: 4 (lower is better)
Translates to: LANFTTAISTTH*LYPRGLCVHFK
Trigger: TTTAAAGTGGACACACAGTCCCCTGGGATACAGCAAATGGGTGGTAGAAATTGCAGTCGTAAAATTTGCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR CAA 72 bp AGCAATATTCTTTTCAGTTTGGCTCTGTCTGGCCAGTaGTACCTGACAGCTGATCTCTGGGTTTGTAGAATG +
Preference number: 4 (lower is better)
Translates to: SNILFSLALSGQ*YLTADLWVCRM
Trigger: CATTCTACAAACCCAGAGATCAGCTGTCAGGTACAACTGGCCAGACAGAGCCAAACTGAAAAGAATATTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR TCA 90 bp TTTTCACTTGTGTTTGTAGACATGCTCCTCCCACACTCAGGAGAGAGGAAAGGGATATTCGACCTGTACTaGACTACTGTTAGATTCTGT +
Preference number: 4 (lower is better)
Translates to: FSLVFVDMLLPHSGERKGIFDLY*TTVRFC
Trigger: ACAGAATCTAACAGTAGTTCAGTACAGGTCGAATAT...CCCTTTCCTCTCTCCTGAGTGTGGGAGGAGCATGTCTACAAACACAAGTGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR TCA 90 bp GCAATTTCTACCACCCATTTGCTGTATCCCAGGGGACTGTGTGTCCACTTTAAAGATTTGATTAAATCCTaGTTCAATGGGCCCAGACTT +
Preference number: 4 (lower is better)
Translates to: AISTTHLLYPRGLCVHFKDLIKS*FNGPRL
Trigger: AAGTCTGGGCCCATTGAATCAGGATTTAATCAAATC...TTTAAAGTGGACACACAGTCCCCTGGGATACAGCAAATGGGTGGTAGAAATTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR TCA 90 bp TGGGAGAAACTAGAGAAGTGTACTAGATTGTTCAGAGAAAGTAAGTCTACAAGTGTGGTTCCTCAGTTCTaGAGGCTGGGAAAAGGACTG +
Preference number: 4 (lower is better)
Translates to: WEKLEKCTRLFRESKSTSVVPQF*RLGKGL
Trigger: CAGTCCTTTTCCCAGCCTTCAGAACTGAGGAACCAC...ACTTGTAGACTTACTTTCTCTGAACAATCTAGTACACTTCTCTAGTTTCTCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR TCA 90 bp GAGCCAAACCCTGATTCAGCTCTGACAGACTACCTTTCTTATCTTAAATATCCTATCTCTTTCCTGGTCTaGCTTCCATGCCAGGATCAA +
Preference number: 4 (lower is better)
Translates to: EPNPDSALTDYLSYLKYPISFLV*LPCQDQ
Trigger: TTGATCCTGGCATGGAAGTCAGACCAGGAAAGAGAT...AGGATATTTAAGATAAGAAAGGTAGTCTGTCAGAGCTGAATCAGGGTTTGGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR TCA 90 bp CGTAATGACTCCATTGATGCCTGGAAAGTAACTCACTTAGCATTCAGTCAGAACGAAGCTCATGAGAACTaGGTAGTACATGGTGTTCCA +
Preference number: 4 (lower is better)
Translates to: RNDSIDAWKVTHLAFSQNEAHEN*VVHGVP
Trigger: TGGAACACCATGTACTACTCAGTTCTCATGAGCTTC...GTTCTGACTGAATGCTAAGTGAGTTACTTTCCAGGCATCAATGGAGTCATTACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR TCA 90 bp TTCAGAGAAAGTAAGTCTACAAGTGCTGATTTTGTTAACATTAGACAATGCCCAGCAGATCTCCTTCCCTaGGCAACTCCAGCCTTGTAC +
Preference number: 4 (lower is better)
Translates to: FRESKSTSADFVNIRQCPADLLP*ATPALY
Trigger: GTACAAGGCTGGAGTTGCTCAGGGAAGGAGATCTGC...TGGGCATTGTCTAATGTTAACAAAATCAGCACTTGTAGACTTACTTTCTCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR TCA 90 bp TTTTCACTTGTGTTTGTAGACATGCTCCTCCCACACTCAGGAGAGAGGAAAGGGAAGGATCCTGACAAGTaGATAACATTTCTGGAACTT +
Preference number: 4 (lower is better)
Translates to: FSLVFVDMLLPHSGERKGKDPDK*ITFLEL
Trigger: AAGTTCCAGAAATGTTATTCACTTGTCAGGATCCTT...CCCTTTCCTCTCTCCTGAGTGTGGGAGGAGCATGTCTACAAACACAAGTGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR TCA 90 bp GCAATTTCTACCACCCATTTGCTGTATCCCAGGGGACTGTGTGTCCACTTTAAAAATTCTGTCCAGCAATaGGATTTGGGCATGACAAAA +
Preference number: 4 (lower is better)
Translates to: AISTTHLLYPRGLCVHFKNSVQQ*DLGMTK
Trigger: TTTTGTCATGCCCAAATCTCATTGCTGGACAGAATT...TTTAAAGTGGACACACAGTCCCCTGGGATACAGCAAATGGGTGGTAGAAATTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR TCA 90 bp CGTAATGACTCCATTGATGCCTGGAAAGTAACTCACTTAGCATTCAGTCAGAACCTTGAACTGGTTCCTTaGGTACCTCATGCATGTAAC +
Preference number: 4 (lower is better)
Translates to: RNDSIDAWKVTHLAFSQNLELVP*VPHACN
Trigger: GTTACATGCATGAGGTACTCAAGGAACCAGTTCAAG...GTTCTGACTGAATGCTAAGTGAGTTACTTTCCAGGCATCAATGGAGTCATTACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR GCA 90 bp TGGGATATTGAGATTTTTCTAGAAATGCAAAGGTCTGCAGCTCCATCTCTCATCTTCTCCGCAGTGCCTTaGACATCGGATATACCTCAT +
Preference number: 4 (lower is better)
Translates to: WDIEIFLEMQRSAAPSLIFSAVP*TSDIPH
Trigger: ATGAGGTATATCCGATGTGCAAGGCACTGCGGAGAA...GATGAGAGATGGAGCTGCAGACCTTTGCATTTCTAGAAAAATCTCAATATCCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR GCA 90 bp GTTTTCCTTAATTCGTTAGTCATCACCTTAGCCTCTGCATTTAAACTGGGGGAATTCTGTTCTCCGCAGTaGCTTGCACATCGGATATAC +
Preference number: 4 (lower is better)
Translates to: VFLNSLVITLASAFKLGEFCSPQ*LAHRIY
Trigger: GTATATCCGATGTGCAAGGCACTGCGGAGAACAGAA...TTCCCCCAGTTTAAATGCAGAGGCTAAGGTGATGACTAACGAATTAAGGAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR GCA 90 bp TGGGATATTGAGATTTTTCTAGAAATGCAAAGGTCTGCAGCTCCATCTCTCATCCCACATTTCCAAAGATaGCAGTCACTGAACTCCGAG +
Preference number: 4 (lower is better)
Translates to: WDIEIFLEMQRSAAPSLIPHFQR*QSLNSE
Trigger: CTCGGAGTTCAGTGACTGGCATCTTTGGAAATGTGG...GATGAGAGATGGAGCTGCAGACCTTTGCATTTCTAGAAAAATCTCAATATCCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR GCA 90 bp TGGGAGAAACTAGAGAAGTGTACTAGATTGTTCAGAGAAAGTAAGTCTACAAGTAGACAGTCGCTGAGATaGTGCTGGGAGCTATCAGCT +
Preference number: 4 (lower is better)
Translates to: WEKLEKCTRLFRESKSTSRQSLR*CWELSA
Trigger: AGCTGATAGCTCCCAGCAGCATCTCAGCGACTGTCT...ACTTGTAGACTTACTTTCTCTGAACAATCTAGTACACTTCTCTAGTTTCTCCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR GCA 90 bp ATCATCATTCCCATCAACCTCTGTGGGAATAAGCGCAGAATGTCCTTATTTTTCCATCTCTCATCCTATTaGACCCTGACTTTTCCCTGG +
Preference number: 4 (lower is better)
Translates to: IIIPINLCGNKRRMSLFFHLSSY*TLTFPW
Trigger: CCAGGGAAAAGTCAGGGTGCAATAGGATGAGAGATG...GAAAAATAAGGACATTCTGCGCTTATTCCCACAGAGGTTGATGGGAATGATGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR GCA 90 bp GTTTTCCTTAATTCGTTAGTCATCACCTTAGCCTCTGCATTTAAACTGGGGGAAGGAAAGGGACTACACTaGCAACGCTTACCACTAATG +
Preference number: 4 (lower is better)
Translates to: VFLNSLVITLASAFKLGEGKGLH*QRLPLM
Trigger: CATTAGTGGTAAGCGTTGGCAGTGTAGTCCCTTTCC...TTCCCCCAGTTTAAATGCAGAGGCTAAGGTGATGACTAACGAATTAAGGAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR GCA 90 bp GCAATTTCTACCACCCATTTGCTGTATCCCAGGGGACTGTGTGTCCACTTTAAACCTCTTTGTGAGACGTaGCATGATTCCCATTTTAAA +
Preference number: 4 (lower is better)
Translates to: AISTTHLLYPRGLCVHFKPLCET*HDSHFK
Trigger: TTTAAAATGGGAATCATGGCACGTCTCACAAAGAGG...TTTAAAGTGGACACACAGTCCCCTGGGATACAGCAAATGGGTGGTAGAAATTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR GCA 90 bp GCAATTTCTACCACCCATTTGCTGTATCCCAGGGGACTGTGTGTCCACTTTAAACATAGGTTTTCTAAGTaGAGTGGTGGCATATTCAGT +
Preference number: 4 (lower is better)
Translates to: AISTTHLLYPRGLCVHFKHRFSK*SGGIFS
Trigger: ACTGAATATGCCACCACTGCACTTAGAAAACCTATG...TTTAAAGTGGACACACAGTCCCCTGGGATACAGCAAATGGGTGGTAGAAATTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CCA 90 bp GAGAAAGTAAGTCTACAAGTGCTGATTTTGTTAACATTAGACAATGCCCACATGAACTCCGAGTGGAGCTaGCTTGTGGAAGTTGGGCTT +
Preference number: 4 (lower is better)
Translates to: EKVSLQVLILLTLDNAHMNSEWS*LVEVGL
Trigger: AAGCCCAACTTCCACAAGCCAGCTCCACTCGGAGTT...CATGTGGGCATTGTCTAATGTTAACAAAATCAGCACTTGTAGACTTACTTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CCA 90 bp GAGAAAGTAAGTCTACAAGTGCTGATTTTGTTAACATTAGACAATGCCCACATGCTCAGTTCTGAAGGCTaGGAAAAGGACTGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: EKVSLQVLILLTLDNAHMLSSEG*EKDWEQ
Trigger: CTGCTCCCAGTCCTTTTCCCAGCCTTCAGAACTGAG...CATGTGGGCATTGTCTAATGTTAACAAAATCAGCACTTGTAGACTTACTTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CCA 90 bp TTGATAAAATTAGCTGCTCCTGGGCTATCTGTTCTAACCACAACCTTCTCCATGCAAGACCGGGCTGTTTaGAAGAAACCGTGTAAAAAG +
Preference number: 4 (lower is better)
Translates to: LIKLAAPGLSVLTTTFSMQDRAV*KKPCKK
Trigger: CTTTTTACACGGTTTCTTCCAAACAGCCCGGTCTTG...CATGGAGAAGGTTGTGGTTAGAACAGATAGCCCAGGAGCAGCTAATTTTATCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CCA 90 bp GAGCCAAACCCTGATTCAGCTCTGACAGACTACCTTTCTTATCTTAAATATCCTCCACAACCTTCTCCATaGTTCCTCCTCTCAAAGTCT +
Preference number: 4 (lower is better)
Translates to: EPNPDSALTDYLSYLKYPPQPSP*FLLSKS
Trigger: AGACTTTGAGAGGAGGAACCATGGAGAAGGTTGTGG...AGGATATTTAAGATAAGAAAGGTAGTCTGTCAGAGCTGAATCAGGGTTTGGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CCA 90 bp GAGAAAGTAAGTCTACAAGTGCTGATTTTGTTAACATTAGACAATGCCCACATGACAGACAGCCTAGGCTaGTCTGCTAGAAGCTGGCAA +
Preference number: 4 (lower is better)
Translates to: EKVSLQVLILLTLDNAHMTDSLG*SARSWQ
Trigger: TTGCCAGCTTCTAGCAGACCAGCCTAGGCTGTCTGT...CATGTGGGCATTGTCTAATGTTAACAAAATCAGCACTTGTAGACTTACTTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CCA 90 bp GACCCAAATGATCTCAGTACCTGCTTCAGGGTTCCAAGTCAATGTCCAGGTGTACAATATGCTATTTTCTaGTCCCCAGATGAATTTACC +
Preference number: 4 (lower is better)
Translates to: DPNDLSTCFRVPSQCPGVQYAIF*SPDEFT
Trigger: GGTAAATTCATCTGGGGACCAGAAAATAGCATATTG...TACACCTGGACATTGACTTGGAACCCTGAAGCAGGTACTGAGATCATTTGGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CCA 90 bp GAGCCAAACCCTGATTCAGCTCTGACAGACTACCTTTCTTATCTTAAATATCCTAACCTTATTCTCTTCTaGCCACCCTCCAACACAACC +
Preference number: 4 (lower is better)
Translates to: EPNPDSALTDYLSYLKYPNLILF*PPSNTT
Trigger: GGTTGTGTTGGAGGGTGGCCAGAAGAGAATAAGGTT...AGGATATTTAAGATAAGAAAGGTAGTCTGTCAGAGCTGAATCAGGGTTTGGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CCA 90 bp TGGGATATTGAGATTTTTCTAGAAATGCAAAGGTCTGCAGCTCCATCTCTCATCCCCCAGAACTTGAACTaGTTCCTTGAGTACCTCATG +
Preference number: 4 (lower is better)
Translates to: WDIEIFLEMQRSAAPSLIPQNLN*FLEYLM
Trigger: CATGAGGTACTCAAGGAACCAGTTCAAGTTCTGGGG...GATGAGAGATGGAGCTGCAGACCTTTGCATTTCTAGAAAAATCTCAATATCCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CCA 90 bp TTGATAAAATTAGCTGCTCCTGGGCTATCTGTTCTAACCACAACCTTCTCCATGAGTGATGTACCAAAGTaGGAGAAAGGCACCAACAAG +
Preference number: 4 (lower is better)
Translates to: LIKLAAPGLSVLTTTFSMSDVPK*EKGTNK
Trigger: CTTGTTGGTGCCTTTCTCCCACTTTGGTACATCACT...CATGGAGAAGGTTGTGGTTAGAACAGATAGCCCAGGAGCAGCTAATTTTATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR CAA 72 bp TACATTTCATTCACACTTCCCAGTGACGCACATTGTTaGCAAACGTATCCATCACTTAGGGCAGGGAATTGT +
Preference number: 4 (lower is better)
Translates to: YISFTLPSDAHC*QTYPSLRAGNC
Trigger: ACAATTCCCTGCCCTAAGTGATGGATACGTTTGCAAACAATGTGCGTCACTGGGAAGTGTGAATGAAATGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR TCA 90 bp TGGGAGAAACTAGAGAAGTGTACTAGATTGTTCAGAGAAAGTAAGTCTACAAGTTTGCTAAAAGGGCCTTaGCGATGGGGTTTGGCACTA +
Preference number: 4 (lower is better)
Translates to: WEKLEKCTRLFRESKSTSLLKGP*RWGLAL
Trigger: TAGTGCCAAACCCCATCGTCAAGGCCCTTTTAGCAA...ACTTGTAGACTTACTTTCTCTGAACAATCTAGTACACTTCTCTAGTTTCTCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR TCA 90 bp ATCATCATTCCCATCAACCTCTGTGGGAATAAGCGCAGAATGTCCTTATTTTTCACCCTGATTCAGCTCTaGCAGACTACCTTTCTTATC +
Preference number: 4 (lower is better)
Translates to: IIIPINLCGNKRRMSLFFTLIQL*QTTFLI
Trigger: GATAAGAAAGGTAGTCTGTCAGAGCTGAATCAGGGT...GAAAAATAAGGACATTCTGCGCTTATTCCCACAGAGGTTGATGGGAATGATGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR GCA 90 bp TTTTCACTTGTGTTTGTAGACATGCTCCTCCCACACTCAGGAGAGAGGAAAGGGAATCATGACTTTCCTTaGAGTTTAATTCCAACCAGT +
Preference number: 4 (lower is better)
Translates to: FSLVFVDMLLPHSGERKGNHDFP*SLIPTS
Trigger: ACTGGTTGGAATTAAACTGCAAGGAAAGTCATGATT...CCCTTTCCTCTCTCCTGAGTGTGGGAGGAGCATGTCTACAAACACAAGTGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR GCA 90 bp TGGGATATTGAGATTTTTCTAGAAATGCAAAGGTCTGCAGCTCCATCTCTCATCCTCCAGTCTTTCTGCTaGACTGCTTTAAACCAACAG +
Preference number: 4 (lower is better)
Translates to: WDIEIFLEMQRSAAPSLILQSFC*TALNQQ
Trigger: CTGTTGGTTTAAAGCAGTGCAGCAGAAAGACTGGAG...GATGAGAGATGGAGCTGCAGACCTTTGCATTTCTAGAAAAATCTCAATATCCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CCA 90 bp GTTTTCCTTAATTCGTTAGTCATCACCTTAGCCTCTGCATTTAAACTGGGGGAATGTAAGAGGATCCGCTaGGTGAAAGTCTTAAAGCAC +
Preference number: 4 (lower is better)
Translates to: VFLNSLVITLASAFKLGECKRIR*VKVLKH
Trigger: GTGCTTTAAGACTTTCACCCAGCGGATCCTCTTACA...TTCCCCCAGTTTAAATGCAGAGGCTAAGGTGATGACTAACGAATTAAGGAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CCA 90 bp GACCCAAATGATCTCAGTACCTGCTTCAGGGTTCCAAGTCAATGTCCAGGTGTATTCAACCTTAACAAATaGAACAGCTTACTCATCTGT +
Preference number: 4 (lower is better)
Translates to: DPNDLSTCFRVPSQCPGVFNLNK*NSLLIC
Trigger: ACAGATGAGTAAGCTGTTCCATTTGTTAAGGTTGAA...TACACCTGGACATTGACTTGGAACCCTGAAGCAGGTACTGAGATCATTTGGGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CCA 90 bp TTGATAAAATTAGCTGCTCCTGGGCTATCTGTTCTAACCACAACCTTCTCCATGACTAGAAGAGTGTTTTaGAGTACAGGTTACTGCCAC +
Preference number: 4 (lower is better)
Translates to: LIKLAAPGLSVLTTTFSMTRRVF*STGYCH
Trigger: GTGGCAGTAACCTGTACTCCAAAACACTCTTCTAGT...CATGGAGAAGGTTGTGGTTAGAACAGATAGCCCAGGAGCAGCTAATTTTATCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CCA 90 bp TGGGATATTGAGATTTTTCTAGAAATGCAAAGGTCTGCAGCTCCATCTCTCATCTTAACCCTGCTGTTCTaGAAATGCCCTCTTTGTGAG +
Preference number: 4 (lower is better)
Translates to: WDIEIFLEMQRSAAPSLILTLLF*KCPLCE
Trigger: CTCACAAAGAGGGCATTTCCAGAACAGCAGGGTTAA...GATGAGAGATGGAGCTGCAGACCTTTGCATTTCTAGAAAAATCTCAATATCCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CCA 90 bp CGTAATGACTCCATTGATGCCTGGAAAGTAACTCACTTAGCATTCAGTCAGAACCTGACAGCTGATCTCTaGGTTTGTAGAATGCAATCT +
Preference number: 4 (lower is better)
Translates to: RNDSIDAWKVTHLAFSQNLTADL*VCRMQS
Trigger: AGATTGCATTCTACAAACCCAGAGATCAGCTGTCAG...GTTCTGACTGAATGCTAAGTGAGTTACTTTCCAGGCATCAATGGAGTCATTACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR TCA 90 bp TGGGATATTGAGATTTTTCTAGAAATGCAAAGGTCTGCAGCTCCATCTCTCATCATATCCTTTCCCCAGTaGTTCAGAGCATTTACTCTC +
Preference number: 4 (lower is better)
Translates to: WDIEIFLEMQRSAAPSLIISFPQ*FRAFTL
Trigger: GAGAGTAAATGCTCTGAATCACTGGGGAAAGGATAT...GATGAGAGATGGAGCTGCAGACCTTTGCATTTCTAGAAAAATCTCAATATCCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR TCA 90 bp TTCAGAGAAAGTAAGTCTACAAGTGCTGATTTTGTTAACATTAGACAATGCCCATTGTGCCCCAGAACTTaGACTGGTTCCTTGAGTACC +
Preference number: 4 (lower is better)
Translates to: FRESKSTSADFVNIRQCPLCPRT*TGSLST
Trigger: GGTACTCAAGGAACCAGTTCAAGTTCTGGGGCACAA...TGGGCATTGTCTAATGTTAACAAAATCAGCACTTGTAGACTTACTTTCTCTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR TCA 90 bp GTTTTCCTTAATTCGTTAGTCATCACCTTAGCCTCTGCATTTAAACTGGGGGAACCTTATCACCCACAGTaGGATTCTTCTCATTCTCTT +
Preference number: 4 (lower is better)
Translates to: VFLNSLVITLASAFKLGEPYHPQ*DSSHSL
Trigger: AAGAGAATGAGAAGAATCTCACTGTGGGTGATAAGG...TTCCCCCAGTTTAAATGCAGAGGCTAAGGTGATGACTAACGAATTAAGGAAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR GCA 90 bp TTCAGAGAAAGTAAGTCTACAAGTGCTGATTTTGTTAACATTAGACAATGCCCAAGGAAAACCTTCCCATaGCAGACATCAAGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: FRESKSTSADFVNIRQCPRKTFP*QTSREE
Trigger: CTCCTCCCTTGATGTCTGGCATGGGAAGGTTTTCCT...TGGGCATTGTCTAATGTTAACAAAATCAGCACTTGTAGACTTACTTTCTCTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR GCA 90 bp GAGCCAAACCCTGATTCAGCTCTGACAGACTACCTTTCTTATCTTAAATATCCTTGGAGTACAGGTTACTaGCACATTCAGTGGAAGTTT +
Preference number: 4 (lower is better)
Translates to: EPNPDSALTDYLSYLKYPWSTGY*HIQWKF
Trigger: AAACTTCCACTGAATGTGGCAGTAACCTGTACTCCA...AGGATATTTAAGATAAGAAAGGTAGTCTGTCAGAGCTGAATCAGGGTTTGGCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR GCA 90 bp GAGCCAAACCCTGATTCAGCTCTGACAGACTACCTTTCTTATCTTAAATATCCTAATGATCTCAGTACCTaGTTCAGGGTTCCAAGTCAA +
Preference number: 4 (lower is better)
Translates to: EPNPDSALTDYLSYLKYPNDLST*FRVPSQ
Trigger: TTGACTTGGAACCCTGAAGCAGGTACTGAGATCATT...AGGATATTTAAGATAAGAAAGGTAGTCTGTCAGAGCTGAATCAGGGTTTGGCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR GCA 90 bp GTTTTCCTTAATTCGTTAGTCATCACCTTAGCCTCTGCATTTAAACTGGGGGAAAGAGTAAAGAAGGATTaGTTCAAGAGCCAAACCCTG +
Preference number: 4 (lower is better)
Translates to: VFLNSLVITLASAFKLGERVKKD*FKSQTL
Trigger: CAGGGTTTGGCTCTTGAAGCAATCCTTCTTTACTCT...TTCCCCCAGTTTAAATGCAGAGGCTAAGGTGATGACTAACGAATTAAGGAAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR GCA 90 bp GCAATTTCTACCACCCATTTGCTGTATCCCAGGGGACTGTGTGTCCACTTTAAAGGGAAAATACAACTTTaGCTTGGGATATTGAGATTT +
Preference number: 4 (lower is better)
Translates to: AISTTHLLYPRGLCVHFKGKIQL*LGILRF
Trigger: AAATCTCAATATCCCAAGGCAAAGTTGTATTTTCCC...TTTAAAGTGGACACACAGTCCCCTGGGATACAGCAAATGGGTGGTAGAAATTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CCA 90 bp TGGGATATTGAGATTTTTCTAGAAATGCAAAGGTCTGCAGCTCCATCTCTCATCCATTCAGTGGAAGTTTaGGATCAGCTAGCAAAGCTA +
Preference number: 4 (lower is better)
Translates to: WDIEIFLEMQRSAAPSLIHSVEV*DQLAKL
Trigger: TAGCTTTGCTAGCTGATCCCAAACTTCCACTGAATG...GATGAGAGATGGAGCTGCAGACCTTTGCATTTCTAGAAAAATCTCAATATCCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CCA 90 bp GAGCCAAACCCTGATTCAGCTCTGACAGACTACCTTTCTTATCTTAAATATCCTGACTCCATTGATGCCTaGAAAGTAACTCACTTAGCA +
Preference number: 4 (lower is better)
Translates to: EPNPDSALTDYLSYLKYPDSIDA*KVTHLA
Trigger: TGCTAAGTGAGTTACTTTCCAGGCATCAATGGAGTC...AGGATATTTAAGATAAGAAAGGTAGTCTGTCAGAGCTGAATCAGGGTTTGGCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CCA 90 bp GAGAAAGTAAGTCTACAAGTGCTGATTTTGTTAACATTAGACAATGCCCACATGACAGGGACTGTGGGTTaGCAGACTTTTGCTCTAAGA +
Preference number: 4 (lower is better)
Translates to: EKVSLQVLILLTLDNAHMTGTVG*QTFALR
Trigger: TCTTAGAGCAAAAGTCTGCCAACCCACAGTCCCTGT...CATGTGGGCATTGTCTAATGTTAACAAAATCAGCACTTGTAGACTTACTTTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CCA 90 bp TTGATAAAATTAGCTGCTCCTGGGCTATCTGTTCTAACCACAACCTTCTCCATGTTCTTGTCATATCAGTaGCCCTTACAGCAAACTACA +
Preference number: 4 (lower is better)
Translates to: LIKLAAPGLSVLTTTFSMFLSYQ*PLQQTT
Trigger: TGTAGTTTGCTGTAAGGGCCACTGATATGACAAGAA...CATGGAGAAGGTTGTGGTTAGAACAGATAGCCCAGGAGCAGCTAATTTTATCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR TCA 90 bp TGGGATATTGAGATTTTTCTAGAAATGCAAAGGTCTGCAGCTCCATCTCTCATCTTAATCCACTTCGATTaGTTCTGGGCTCTCAGTTAT +
Preference number: 4 (lower is better)
Translates to: WDIEIFLEMQRSAAPSLILIHFD*FWALSY
Trigger: ATAACTGAGAGCCCAGAATCAATCGAAGTGGATTAA...GATGAGAGATGGAGCTGCAGACCTTTGCATTTCTAGAAAAATCTCAATATCCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR TCA 90 bp GAGAAAGTAAGTCTACAAGTGCTGATTTTGTTAACATTAGACAATGCCCACATGAAAGTGCATGAGCAGTaGGCATGGAAGACATGGAAA +
Preference number: 4 (lower is better)
Translates to: EKVSLQVLILLTLDNAHMKVHEQ*AWKTWK
Trigger: TTTCCATGTCTTCCATGCTCACTGCTCATGCACTTT...CATGTGGGCATTGTCTAATGTTAACAAAATCAGCACTTGTAGACTTACTTTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR TCA 90 bp GAGCCAAACCCTGATTCAGCTCTGACAGACTACCTTTCTTATCTTAAATATCCTGTGTCTCATTTTTATTaGGGGAAGACAATGGGAAAG +
Preference number: 4 (lower is better)
Translates to: EPNPDSALTDYLSYLKYPVSHFY*GKTMGK
Trigger: CTTTCCCATTGTCTTCCCTCAATAAAAATGAGACAC...AGGATATTTAAGATAAGAAAGGTAGTCTGTCAGAGCTGAATCAGGGTTTGGCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR TCA 90 bp TGGGAGAAACTAGAGAAGTGTACTAGATTGTTCAGAGAAAGTAAGTCTACAAGTCATTTTGGACCCAAATaGTCTCAGTACCTGCTTCAG +
Preference number: 4 (lower is better)
Translates to: WEKLEKCTRLFRESKSTSHFGPK*SQYLLQ
Trigger: CTGAAGCAGGTACTGAGATCATTTGGGTCCAAAATG...ACTTGTAGACTTACTTTCTCTGAACAATCTAGTACACTTCTCTAGTTTCTCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR TCA 90 bp TGGGAGAAACTAGAGAAGTGTACTAGATTGTTCAGAGAAAGTAAGTCTACAAGTCAACCAATAGCCCAGTaGGTTAAGCAAAGACAACCA +
Preference number: 4 (lower is better)
Translates to: WEKLEKCTRLFRESKSTSQPIAQ*VKQRQP
Trigger: TGGTTGTCTTTGCTTAACTCACTGGGCTATTGGTTG...ACTTGTAGACTTACTTTCTCTGAACAATCTAGTACACTTCTCTAGTTTCTCCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR TCA 90 bp TGGGATATTGAGATTTTTCTAGAAATGCAAAGGTCTGCAGCTCCATCTCTCATCCACTATCTGTGCCTTTaGCAAACCAAACCTATAATG +
Preference number: 4 (lower is better)
Translates to: WDIEIFLEMQRSAAPSLIHYLCL*QTKPIM
Trigger: CATTATAGGTTTGGTTTGTCAAAGGCACAGATAGTG...GATGAGAGATGGAGCTGCAGACCTTTGCATTTCTAGAAAAATCTCAATATCCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR TCA 90 bp GAGAAAGTAAGTCTACAAGTGCTGATTTTGTTAACATTAGACAATGCCCACATGTCCAAAAGGCAGATGTaGAACTGGGCATTCACTCTA +
Preference number: 4 (lower is better)
Translates to: EKVSLQVLILLTLDNAHMSKRQM*NWAFTL
Trigger: TAGAGTGAATGCCCAGTTTCACATCTGCCTTTTGGA...CATGTGGGCATTGTCTAATGTTAACAAAATCAGCACTTGTAGACTTACTTTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR GCA 90 bp TTCAGAGAAAGTAAGTCTACAAGTGCTGATTTTGTTAACATTAGACAATGCCCACCACCATCAATAAAGTaGTGTAGTGTCCCATCCTGG +
Preference number: 4 (lower is better)
Translates to: FRESKSTSADFVNIRQCPPPSIK*CSVPSW
Trigger: CCAGGATGGGACACTACAGCACTTTATTGATGGTGG...TGGGCATTGTCTAATGTTAACAAAATCAGCACTTGTAGACTTACTTTCTCTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR GCA 90 bp TGGGAGAAACTAGAGAAGTGTACTAGATTGTTCAGAGAAAGTAAGTCTACAAGTAGAACCAAGTCCCTGTaGATTCTTAGTCACAACGGT +
Preference number: 4 (lower is better)
Translates to: WEKLEKCTRLFRESKSTSRTKSL*ILSHNG
Trigger: ACCGTTGTGACTAAGAATGCACAGGGACTTGGTTCT...ACTTGTAGACTTACTTTCTCTGAACAATCTAGTACACTTCTCTAGTTTCTCCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR GCA 90 bp TGGGAGAAACTAGAGAAGTGTACTAGATTGTTCAGAGAAAGTAAGTCTACAAGTAGAAATGCAAAGGTCTaGAGCTCCATCTCTCATCCT +
Preference number: 4 (lower is better)
Translates to: WEKLEKCTRLFRESKSTSRNAKV*SSISHP
Trigger: AGGATGAGAGATGGAGCTGCAGACCTTTGCATTTCT...ACTTGTAGACTTACTTTCTCTGAACAATCTAGTACACTTCTCTAGTTTCTCCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR GCA 90 bp ATCATCATTCCCATCAACCTCTGTGGGAATAAGCGCAGAATGTCCTTATTTTTCCTTAATGCACACAACTaGGTAATGACTCCATTGATG +
Preference number: 4 (lower is better)
Translates to: IIIPINLCGNKRRMSLFFLNAHN*VMTPLM
Trigger: CATCAATGGAGTCATTACGCAGTTGTGTGCATTAAG...GAAAAATAAGGACATTCTGCGCTTATTCCCACAGAGGTTGATGGGAATGATGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CCA 90 bp GAGAAAGTAAGTCTACAAGTGCTGATTTTGTTAACATTAGACAATGCCCACATGTGTAGTGTCCCATCCTaGTCATATATCTCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: EKVSLQVLILLTLDNAHMCSVPS*SYISQR
Trigger: TCTCTGGGAGATATATGACCAGGATGGGACACTACA...CATGTGGGCATTGTCTAATGTTAACAAAATCAGCACTTGTAGACTTACTTTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CCA 90 bp ATCATCATTCCCATCAACCTCTGTGGGAATAAGCGCAGAATGTCCTTATTTTTCTTTAAGTTTTCATCCTaGGCAATGCATTGTAAGGGG +
Preference number: 4 (lower is better)
Translates to: IIIPINLCGNKRRMSLFFFKFSS*AMHCKG
Trigger: CCCCTTACAATGCATTGCCCAGGATGAAAACTTAAA...GAAAAATAAGGACATTCTGCGCTTATTCCCACAGAGGTTGATGGGAATGATGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CCA 90 bp GTTTTCCTTAATTCGTTAGTCATCACCTTAGCCTCTGCATTTAAACTGGGGGAAAAAATTCTAGGTGAATaGCTTGAGATTGGGCAACAG +
Preference number: 4 (lower is better)
Translates to: VFLNSLVITLASAFKLGEKILGE*LEIGQQ
Trigger: CTGTTGCCCAATCTCAAGCCATTCACCTAGAATTTT...TTCCCCCAGTTTAAATGCAGAGGCTAAGGTGATGACTAACGAATTAAGGAAAAC
40% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR TCA 90 bp GAGCCAAACCCTGATTCAGCTCTGACAGACTACCTTTCTTATCTTAAATATCCTTTGCTTAAGTGTCCGTaGCATTTAATCATGACTTTC +
Preference number: 4 (lower is better)
Translates to: EPNPDSALTDYLSYLKYPLLKCP*HLIMTF
Trigger: GAAAGTCATGATTAAATGTCACGGACACTTAAGCAA...AGGATATTTAAGATAAGAAAGGTAGTCTGTCAGAGCTGAATCAGGGTTTGGCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR GCA 90 bp TGGGAGAAACTAGAGAAGTGTACTAGATTGTTCAGAGAAAGTAAGTCTACAAGTAAACCGTGTAAAAAGTaGATGAGCAGTGAGCATGGA +
Preference number: 4 (lower is better)
Translates to: WEKLEKCTRLFRESKSTSKPCKK*MSSEHG
Trigger: TCCATGCTCACTGCTCATGCACTTTTTACACGGTTT...ACTTGTAGACTTACTTTCTCTGAACAATCTAGTACACTTCTCTAGTTTCTCCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR GCA 90 bp CGTAATGACTCCATTGATGCCTGGAAAGTAACTCACTTAGCATTCAGTCAGAACAAGACAACCAAGTTGTaGATCTTAACTTGTTTTGCA +
Preference number: 4 (lower is better)
Translates to: RNDSIDAWKVTHLAFSQNKTTKL*ILTCFA
Trigger: TGCAAAACAAGTTAAGATGCACAACTTGGTTGTCTT...GTTCTGACTGAATGCTAAGTGAGTTACTTTCCAGGCATCAATGGAGTCATTACG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR GCA 90 bp CGTAATGACTCCATTGATGCCTGGAAAGTAACTCACTTAGCATTCAGTCAGAACAACATGAAAGAGTTGTaGTGTAGAAATAGATCTCCA +
Preference number: 4 (lower is better)
Translates to: RNDSIDAWKVTHLAFSQNNMKEL*CRNRSP
Trigger: TGGAGATCTATTTCTACAGCACAACTCTTTCATGTT...GTTCTGACTGAATGCTAAGTGAGTTACTTTCCAGGCATCAATGGAGTCATTACG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CCA 90 bp GAGAAAGTAAGTCTACAAGTGCTGATTTTGTTAACATTAGACAATGCCCACATGAAAATTAGCTGCTCCTaGGCTATCTGTTCTAACCAC +
Preference number: 4 (lower is better)
Translates to: EKVSLQVLILLTLDNAHMKISCS*AICSNH
Trigger: GTGGTTAGAACAGATAGCCCAGGAGCAGCTAATTTT...CATGTGGGCATTGTCTAATGTTAACAAAATCAGCACTTGTAGACTTACTTTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CCA 90 bp TTGATAAAATTAGCTGCTCCTGGGCTATCTGTTCTAACCACAACCTTCTCCATGACTTCACTGAGACAATaGTCTAAAGGACTAAAATAC +
Preference number: 4 (lower is better)
Translates to: LIKLAAPGLSVLTTTFSMTSLRQ*SKGLKY
Trigger: GTATTTTAGTCCTTTAGACCATTGTCTCAGTGAAGT...CATGGAGAAGGTTGTGGTTAGAACAGATAGCCCAGGAGCAGCTAATTTTATCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR GCA 90 bp GAGAAAGTAAGTCTACAAGTGCTGATTTTGTTAACATTAGACAATGCCCACATGGTTAACATTAGACAATaGCCACATGTGGATCAACAG +
Preference number: 4 (lower is better)
Translates to: EKVSLQVLILLTLDNAHMVNIRQ*PHVDQQ
Trigger: CTGTTGATCCACATGTGGGCATTGTCTAATGTTAAC...CATGTGGGCATTGTCTAATGTTAACAAAATCAGCACTTGTAGACTTACTTTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CCA 90 bp GAGAAAGTAAGTCTACAAGTGCTGATTTTGTTAACATTAGACAATGCCCACATGCTTGACGATGGGGTTTaGCACTATTTTTGTTCACAT +
Preference number: 4 (lower is better)
Translates to: EKVSLQVLILLTLDNAHMLDDGV*HYFCSH
Trigger: ATGTGAACAAAAATAGTGCCAAACCCCATCGTCAAG...CATGTGGGCATTGTCTAATGTTAACAAAATCAGCACTTGTAGACTTACTTTCTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CCA 90 bp GAGAAAGTAAGTCTACAAGTGCTGATTTTGTTAACATTAGACAATGCCCACATGCAAAGTCTCCTTGTCTaGGCTATTTTCACTTGTGTT +
Preference number: 4 (lower is better)
Translates to: EKVSLQVLILLTLDNAHMQSLLV*AIFTCV
Trigger: AACACAAGTGAAAATAGCCCAGACAAGGAGACTTTG...CATGTGGGCATTGTCTAATGTTAACAAAATCAGCACTTGTAGACTTACTTTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CCA 90 bp GAGAAAGTAAGTCTACAAGTGCTGATTTTGTTAACATTAGACAATGCCCACATGATGTGCCCACATGCCTaGAAAATTAGAGTATCCAAT +
Preference number: 4 (lower is better)
Translates to: EKVSLQVLILLTLDNAHMMCPHA*KIRVSN
Trigger: ATTGGATACTCTAATTTTCCAGGCATGTGGGCACAT...CATGTGGGCATTGTCTAATGTTAACAAAATCAGCACTTGTAGACTTACTTTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CCA 90 bp GAGAAAGTAAGTCTACAAGTGCTGATTTTGTTAACATTAGACAATGCCCACATGTGTATGCACATATCCTaGGGAAAATACAACTTTGCC +
Preference number: 4 (lower is better)
Translates to: EKVSLQVLILLTLDNAHMCMHIS*GKYNFA
Trigger: GGCAAAGTTGTATTTTCCCCAGGATATGTGCATACA...CATGTGGGCATTGTCTAATGTTAACAAAATCAGCACTTGTAGACTTACTTTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CCA 90 bp TGGGAGAAACTAGAGAAGTGTACTAGATTGTTCAGAGAAAGTAAGTCTACAAGTGAGAACTTTAAACTTTaGGTTGATGATCACCCAGGT +
Preference number: 4 (lower is better)
Translates to: WEKLEKCTRLFRESKSTSENFKL*VDDHPG
Trigger: ACCTGGGTGATCATCAACCCAAAGTTTAAAGTTCTC...ACTTGTAGACTTACTTTCTCTGAACAATCTAGTACACTTCTCTAGTTTCTCCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CCA 90 bp TGGGAGAAACTAGAGAAGTGTACTAGATTGTTCAGAGAAAGTAAGTCTACAAGTACATTTTCTCCAGGTTaGGAGAAACTAGAGAAGTGT +
Preference number: 4 (lower is better)
Translates to: WEKLEKCTRLFRESKSTSTFSPG*EKLEKC
Trigger: ACACTTCTCTAGTTTCTCCCAACCTGGAGAAAATGT...ACTTGTAGACTTACTTTCTCTGAACAATCTAGTACACTTCTCTAGTTTCTCCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CCA 90 bp GTTTTCCTTAATTCGTTAGTCATCACCTTAGCCTCTGCATTTAAACTGGGGGAATCTAACCATTTTATTTaGTGGAAAGTTGGAGAGAGA +
Preference number: 4 (lower is better)
Translates to: VFLNSLVITLASAFKLGESNHFI*WKVGER
Trigger: TCTCTCTCCAACTTTCCACCAAATAAAATGGTTAGA...TTCCCCCAGTTTAAATGCAGAGGCTAAGGTGATGACTAACGAATTAAGGAAAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR CAA 72 bp GATTGTTCAGAGAAAGTAAGTCTACAAGTGCTGATTTaGTTAACATTAGACAATGCCCACATGTGGATCAAC +
Preference number: 4 (lower is better)
Translates to: DCSEKVSLQVLI*LTLDNAHMWIN
Trigger: GTTGATCCACATGTGGGCATTGTCTAATGTTAACAAAATCAGCACTTGTAGACTTACTTTCTCTGAACAATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR GCA 90 bp TGGGAGAAACTAGAGAAGTGTACTAGATTGTTCAGAGAAAGTAAGTCTACAAGTATTGATAAAATTAGCTaGTCCTGGGCTATCTGTTCT +
Preference number: 4 (lower is better)
Translates to: WEKLEKCTRLFRESKSTSIDKIS*SWAICS
Trigger: AGAACAGATAGCCCAGGAGCAGCTAATTTTATCAAT...ACTTGTAGACTTACTTTCTCTGAACAATCTAGTACACTTCTCTAGTTTCTCCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR GCA 90 bp TTCAGAGAAAGTAAGTCTACAAGTGCTGATTTTGTTAACATTAGACAATGCCCAGTGACGCACATTGTTTaGAAACGTATCCATCACTTA +
Preference number: 4 (lower is better)
Translates to: FRESKSTSADFVNIRQCPVTHIV*KRIHHL
Trigger: TAAGTGATGGATACGTTTGCAAACAATGTGCGTCAC...TGGGCATTGTCTAATGTTAACAAAATCAGCACTTGTAGACTTACTTTCTCTGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR GCA 90 bp TTCAGAGAAAGTAAGTCTACAAGTGCTGATTTTGTTAACATTAGACAATGCCCAAAGAATACAGCAGCATaGATGATCTCATTGGTCCTT +
Preference number: 4 (lower is better)
Translates to: FRESKSTSADFVNIRQCPKNTAA*MISLVL
Trigger: AAGGACCAATGAGATCATGCATGCTGCTGTATTCTT...TGGGCATTGTCTAATGTTAACAAAATCAGCACTTGTAGACTTACTTTCTCTGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CCA 90 bp GAGAAAGTAAGTCTACAAGTGCTGATTTTGTTAACATTAGACAATGCCCACATGGGAGATAGTAAGAACTaGAGGAAAATTCTAGGTGAA +
Preference number: 4 (lower is better)
Translates to: EKVSLQVLILLTLDNAHMGDSKN*RKILGE
Trigger: TTCACCTAGAATTTTCCTCCAGTTCTTACTATCTCC...CATGTGGGCATTGTCTAATGTTAACAAAATCAGCACTTGTAGACTTACTTTCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CCA 90 bp TTCAGAGAAAGTAAGTCTACAAGTGCTGATTTTGTTAACATTAGACAATGCCCAATATTCTTTTCAGTTTaGCTCTGTCTGGCCAGTTGT +
Preference number: 4 (lower is better)
Translates to: FRESKSTSADFVNIRQCPIFFSV*LCLASC
Trigger: ACAACTGGCCAGACAGAGCCAAACTGAAAAGAATAT...TGGGCATTGTCTAATGTTAACAAAATCAGCACTTGTAGACTTACTTTCTCTGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR TCA 90 bp TTCAGAGAAAGTAAGTCTACAAGTGCTGATTTTGTTAACATTAGACAATGCCCAATGTTCTTGCAATCTTaGCAGGACAAAATAAGTCCT +
Preference number: 4 (lower is better)
Translates to: FRESKSTSADFVNIRQCPMFLQS*QDKISP
Trigger: AGGACTTATTTTGTCCTGTCAAGATTGCAAGAACAT...TGGGCATTGTCTAATGTTAACAAAATCAGCACTTGTAGACTTACTTTCTCTGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR GCA 90 bp TTCAGAGAAAGTAAGTCTACAAGTGCTGATTTTGTTAACATTAGACAATGCCCAGGAAATCTTTGGTTTTaGTTAAGTGTCCGTGACATT +
Preference number: 4 (lower is better)
Translates to: FRESKSTSADFVNIRQCPGNLWF*LSVRDI
Trigger: AATGTCACGGACACTTAAGCAAAACCAAAGATTTCC...TGGGCATTGTCTAATGTTAACAAAATCAGCACTTGTAGACTTACTTTCTCTGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CCA 90 bp TTCAGAGAAAGTAAGTCTACAAGTGCTGATTTTGTTAACATTAGACAATGCCCATTTATTTCTTATTCCTaGCCTGGTTTCTGTAGGCAT +
Preference number: 4 (lower is better)
Translates to: FRESKSTSADFVNIRQCPFISYS*PGFCRH
Trigger: ATGCCTACAGAAACCAGGCCAGGAATAAGAAATAAA...TGGGCATTGTCTAATGTTAACAAAATCAGCACTTGTAGACTTACTTTCTCTGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
3UTR CAA 72 bp TTCATGAAATACTTAGAACTGCTAAGGAGAATAATTTaGCCTCTGGCTTTTGCTATACATTTTCTCCAGGTT +
Preference number: 4 (lower is better)
Translates to: FMKYLELLRRII*PLAFAIHFLQV
Trigger: AACCTGGAGAAAATGTATAGCAAAAGCCAGAGGCAAAATTATTCTCCTTAGCAGTTCTAAGTATTTCATGAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS GCA 90 bp TCGGCGGCGACGGCAGCGGCGGCTAGAGGCGCGAACACCGGCAGCTaGGACACCGGCAGGGCCGAGAGACCAGCCAGCGCGGCGGCAGCG +
Preference number: 5 (lower is better)
Translates to: SAATAAAARGANTGS*DTGRAERPASAAAA
Trigger: CGCTGCCGCCGCGCTGGCTGGTCTCTCGGCCCTGCCGGTGTCGCAGCTGCCGGTGTTCGCGCCTCTAGCCGCCGCTGCCGTCGCCGCCGA
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS CCA 90 bp GGGCGCGAGAGTGCGGACGGACCTGGGCGCCCGACTCAACCGCCGTaGGCTGCTGCGCTTGGCCGCTGCCGCGTCCTGGCTCCTTGGTTC +
Preference number: 5 (lower is better)
Translates to: GRESADGPGRPTQPP*AAALGRCRVLAPWF
Trigger: GAACCAAGGAGCCAGGACGCGGCAGCGGCCAAGCGCAGCAGCCCACGGCGGTTGAGTCGGGCGCCCAGGTCCGTCCGCACTCTCGCGCCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS CCA 90 bp CGCAGGAGGAGGCGGAGGAGGCGGAGGTGGAAGAGGAAGCCGGCGTaGACGAGGCGGAGGAGAGAGAGGCGGGCCGCGGGCGCAGGCTGT +
Preference number: 5 (lower is better)
Translates to: RRRRRRRRRWKRKPA*TRRRRERRAAGAGC
Trigger: ACAGCCTGCGCCCGCGGCCCGCCTCTCTCTCCTCCGCCTCGTCCACGCCGGCTTCCTCTTCCACCTCCGCCTCCTCCGCCTCCTCCTGCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS CCA 90 bp CGGCAGCGGCCGCAGCAGCGCAGGAGGAGGCGGAGGAGGCGGAGGTaGAAGAGGAAGCCGGCGTGGACGAGGCGGAGGAGAGAGAGGCGG +
Preference number: 5 (lower is better)
Translates to: RQRPQQRRRRRRRRR*KRKPAWTRRRRERR
Trigger: CCGCCTCTCTCTCCTCCGCCTCGTCCACGCCGGCTTCCTCTTCCACCTCCGCCTCCTCCGCCTCCTCCTGCGCTGCTGCGGCCGCTGCCG
74% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS GCA 90 bp CGAGAGTGCGGACGGACCTGGGCGCCCGACTCAACCGCCGTGGGCTaGTGCGCTTGGCCGCTGCCGCGTCCTGGCTCCTTGGTTCCACGC +
Preference number: 5 (lower is better)
Translates to: RECGRTWAPDSTAVG*CAWPLPRPGSLVPR
Trigger: GCGTGGAACCAAGGAGCCAGGACGCGGCAGCGGCCAAGCGCAGCAGCCCACGGCGGTTGAGTCGGGCGCCCAGGTCCGTCCGCACTCTCG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS GCA 90 bp GCGGCGGCCGCAGCGCTGCTGGTGCCCACAAGCCGGCGCAGCGAGTaGAGTGGCCCATGCATAGGGCACTCGCCGTTGCGGTTGTCCGCG +
Preference number: 5 (lower is better)
Translates to: AAAAALLVPTSRRSE*SGPCIGHSPLRLSA
Trigger: CGCGGACAACCGCAACGGCGAGTGCCCTATGCATGGGCCACTGCACTCGCTGCGCCGGCTTGTGGGCACCAGCAGCGCTGCGGCCGCCGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS TCA 90 bp GAAGAGGCTGCGGCGCGCTCAGGAGACCCGCGGCGCCGCTGCCCTTaGGCGGGCCTGCGCCTCCGTGAGGGAAGAGTTGCTGCCAGTGCT +
Preference number: 5 (lower is better)
Translates to: EEAAARSGDPRRRCP*AGLRLREGRVAASA
Trigger: AGCACTGGCAGCAACTCTTCCCTCACGGAGGCGCAGGCCCGCTCAAGGGCAGCGGCGCCGCGGGTCTCCTGAGCGCGCCGCAGCCTCTTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS GCA 90 bp GAGTGCGGACGGACCTGGGCGCCCGACTCAACCGCCGTGGGCTGCTaGGCTTGGCCGCTGCCGCGTCCTGGCTCCTTGGTTCCACGCTCT +
Preference number: 5 (lower is better)
Translates to: ECGRTWAPDSTAVGC*AWPLPRPGSLVPRS
Trigger: AGAGCGTGGAACCAAGGAGCCAGGACGCGGCAGCGGCCAAGCGCAGCAGCCCACGGCGGTTGAGTCGGGCGCCCAGGTCCGTCCGCACTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS CCA 90 bp AGAAAATTGGGAGGCCCGCGGAGGGCGCGAGAGTGCGGACGGACCTaGGCGCCCGACTCAACCGCCGTGGGCTGCTGCGCTTGGCCGCTG +
Preference number: 5 (lower is better)
Translates to: RKLGGPRRARECGRT*APDSTAVGCCAWPL
Trigger: CAGCGGCCAAGCGCAGCAGCCCACGGCGGTTGAGTCGGGCGCCCAGGTCCGTCCGCACTCTCGCGCCCTCCGCGGGCCTCCCAATTTTCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS GCA 90 bp GACCTGCAAGCGAGAAAATTGGGAGGCCCGCGGAGGGCGCGAGAGTaGGGACGGACCTGGGCGCCCGACTCAACCGCCGTGGGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: DLQARKLGGPRRARE*GRTWAPDSTAVGCC
Trigger: GCAGCAGCCCACGGCGGTTGAGTCGGGCGCCCAGGTCCGTCCGCACTCTCGCGCCCTCCGCGGGCCTCCCAATTTTCTCGCTTGCAGGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS GCA 90 bp TCTGCGCCGCGCAGATGCCGTAGGCCAGGCCGGGCACAGTACTGGTaGAGAGGCACACCTCGCGAGGCAGGTCCCGCAGCCACTCCGGCA +
Preference number: 5 (lower is better)
Translates to: SAPRRCRRPGRAQYW*RGTPREAGPAATPA
Trigger: TGCCGGAGTGGCTGCGGGACCTGCCTCGCGAGGTGTGCCTCTGCACCAGTACTGTGCCCGGCCTGGCCTACGGCATCTGCGCGGCGCAGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407847.5
ENST00000434521.1
ENST00000464424.1
CDS CCA 90 bp TCCTCTGCGCCGCGCAGATGCCGTAGGCCAGGCCGGGCACAGTACTaGTGCAGAGGCACACCTCGCGAGGCAGGTCCCGCAGCCACTCCG +
Preference number: 5 (lower is better)
Translates to: SSAPRRCRRPGRAQY*CRGTPREAGPAATP
Trigger: CGGAGTGGCTGCGGGACCTGCCTCGCGAGGTGTGCCTCTGCACCAGTACTGTGCCCGGCCTGGCCTACGGCATCTGCGCGGCGCAGAGGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407847.5
ENST00000434521.1
ENST00000464424.1
CDS GCA 90 bp TGTCCGGCGCCTCGAACTGAAAACTCGGTGCTGCCGGTGGGTGCGTaGGGGTGTCTCGGTGAGCGTGCGGGTGCGCGAGAGTGTGCGCCC +
Preference number: 5 (lower is better)
Translates to: CPAPRTENSVLPVGA*GCLGERAGARECAP
Trigger: GGGCGCACACTCTCGCGCACCCGCACGCTCACCGAGACACCCGCACGCACCCACCGGCAGCACCGAGTTTTCAGTTCGAGGCGCCGGACA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS GCA 90 bp GATCTCCATGCGCTGCTGGCCATACAGGTAATAGTCCAGCTCCTCTaGGCTGCAGCGGAAGCGCGGGGCGCCGCGACCCTCCCCGCCGCC +
Preference number: 5 (lower is better)
Translates to: DLHALLAIQVIVQLL*AAAEARGAATLPAA
Trigger: GGCGGCGGGGAGGGTCGCGGCGCCCCGCGCTTCCGCTGCAGCGCAGAGGAGCTGGACTATTACCTGTATGGCCAGCAGCGCATGGAGATC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS CCA 90 bp GGCCGCAGCGCTGCTGGTGCCCACAAGCCGGCGCAGCGAGTGCAGTaGCCCATGCATAGGGCACTCGCCGTTGCGGTTGTCCGCGCACAT +
Preference number: 5 (lower is better)
Translates to: GRSAAGAHKPAQRVQ*PMHRALAVAVVRAH
Trigger: ATGTGCGCGGACAACCGCAACGGCGAGTGCCCTATGCATGGGCCACTGCACTCGCTGCGCCGGCTTGTGGGCACCAGCAGCGCTGCGGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS CCA 90 bp GAGATTGTGCCGCCCGGAAACCTCCCGACCTGCAAGCGAGAAAATTaGGAGGCCCGCGGAGGGCGCGAGAGTGCGGACGGACCTGGGCGC +
Preference number: 5 (lower is better)
Translates to: EIVPPGNLPTCKREN*EARGGRESADGPGR
Trigger: GCGCCCAGGTCCGTCCGCACTCTCGCGCCCTCCGCGGGCCTCCCAATTTTCTCGCTTGCAGGTCGGGAGGTTTCCGGGCGGCACAATCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CAA 90 bp GGTAGCATTGACTCAGCGAAGGCTCTCACTCTGCTTCCGTGGTCCCCGCTGGGGCCACCACCACCGCACTaGACGGGCCCGGGGCCGGAG +
Preference number: 5 (lower is better)
Translates to: GSIDSAKALTLLPWSPLGPPPPH*TGPGPE
Trigger: CTCCGGCCCCGGGCCCGTCAAGTGCGGTGGTGGTGG...CCCCAGCGGGGACCACGGAAGCAGAGTGAGAGCCTTCGCTGAGTCAATGCTACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS TCA 90 bp GTGCGGGTGCGCGAGAGTGTGCGCCCTGCGTGCGCTACATGCCCCTaGGCAGCGCGGGAGGAGAGTCCTAGAGATTGTGCCGCCCGGAAA +
Preference number: 5 (lower is better)
Translates to: VRVRESVRPACATCP*AAREESPRDCAARK
Trigger: TTTCCGGGCGGCACAATCTCTAGGACTCTCCTCCCGCGCTGCTCAGGGGCATGTAGCGCACGCAGGGCGCACACTCTCGCGCACCCGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS GCA 90 bp GCGCTGCTGGTGCCCACAAGCCGGCGCAGCGAGTGCAGTGGCCCATaGATAGGGCACTCGCCGTTGCGGTTGTCCGCGCACATGTCGCAA +
Preference number: 5 (lower is better)
Translates to: ALLVPTSRRSECSGP*IGHSPLRLSAHMSQ
Trigger: TTGCGACATGTGCGCGGACAACCGCAACGGCGAGTGCCCTATGCATGGGCCACTGCACTCGCTGCGCCGGCTTGTGGGCACCAGCAGCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS GCA 90 bp GGGAGGAGAGTCCTAGAGATTGTGCCGCCCGGAAACCTCCCGACCTaGAAGCGAGAAAATTGGGAGGCCCGCGGAGGGCGCGAGAGTGCG +
Preference number: 5 (lower is better)
Translates to: GRRVLEIVPPGNLPT*KRENWEARGGRESA
Trigger: CGCACTCTCGCGCCCTCCGCGGGCCTCCCAATTTTCTCGCTTGCAGGTCGGGAGGTTTCCGGGCGGCACAATCTCTAGGACTCTCCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS CCA 90 bp TGCGCCTCCGTGAGGGAAGAGTTGCTGCCAGTGCTGCAGGTAGGCTaGGTCCACTTTGAGGAAGGCCGAACCGCCGGGGTCTCCGGGCTT +
Preference number: 5 (lower is better)
Translates to: CASVREELLPVLQVG*VHFEEGRTAGVSGL
Trigger: AAGCCCGGAGACCCCGGCGGTTCGGCCTTCCTCAAAGTGGACCCAGCCTACCTGCAGCACTGGCAGCAACTCTTCCCTCACGGAGGCGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS TCA 90 bp GAGGGAAGAGTTGCTGCCAGTGCTGCAGGTAGGCTGGGTCCACTTTaGGGAAGGCCGAACCGCCGGGGTCTCCGGGCTTCAGCATGTCCG +
Preference number: 5 (lower is better)
Translates to: EGRVAASAAGRLGPL*GRPNRRGLRASACP
Trigger: CGGACATGCTGAAGCCCGGAGACCCCGGCGGTTCGGCCTTCCTCAAAGTGGACCCAGCCTACCTGCAGCACTGGCAGCAACTCTTCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS GCA 90 bp AAGGTCCAATCCAGGTGCCTTGCTGGATCCTCTGCGCCGCGCAGATaGCGTAGGCCAGGCCGGGCACAGTACTGGTGCAGAGGCACACCT +
Preference number: 5 (lower is better)
Translates to: KVQSRCLAGSSAPRR*RRPGRAQYWCRGTP
Trigger: AGGTGTGCCTCTGCACCAGTACTGTGCCCGGCCTGGCCTACGGCATCTGCGCGGCGCAGAGGATCCAGCAAGGCACCTGGATTGGACCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407847.5
ENST00000434521.1
ENST00000464424.1
CDS GCA 90 bp CCTTCTCTGGGGGCAGAAGCACGCCTTGGAAAGGTCCAATCCAGGTaGCTTGCTGGATCCTCTGCGCCGCGCAGATGCCGTAGGCCAGGC +
Preference number: 5 (lower is better)
Translates to: PSLGAEARLGKVQSR*LAGSSAPRRCRRPG
Trigger: GCCTGGCCTACGGCATCTGCGCGGCGCAGAGGATCCAGCAAGGCACCTGGATTGGACCTTTCCAAGGCGTGCTTCTGCCCCCAGAGAAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000407847.5
ENST00000434521.1
ENST00000464424.1
CDS-3UTR CAA 90 bp GGTAGCATTGACTCAGCGAAGGCTCTCACTCTGCTTCCGTGGTCCCCGCTGGGGTGGGTTCGGATGTGGTaGTTGAGGGTGGTGGCCCCG +
Preference number: 5 (lower is better)
Translates to: GSIDSAKALTLLPWSPLGWVRMW*LRVVAP
Trigger: CGGGGCCACCACCCTCAACAACCACATCCGAACCCA...CCCCAGCGGGGACCACGGAAGCAGAGTGAGAGCCTTCGCTGAGTCAATGCTACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS GCA 90 bp CTGGTCATATATCTCCCAGAGATGCTGCGTGTTCCTCACGGCGCCTaGCTGCACCTTCTCTGGGGGCAGAAGCACGCCTTGGAAAGGTCC +
Preference number: 5 (lower is better)
Translates to: LVIYLPEMLRVPHGA*LHLLWGQKHALERS
Trigger: GGACCTTTCCAAGGCGTGCTTCTGCCCCCAGAGAAGGTGCAGGCAGGCGCCGTGAGGAACACGCAGCATCTCTGGGAGATATATGACCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407847.5
ENST00000464424.1
CDS GCA 90 bp AAGGGACATTTACTCCCAGAGATGCTGCGTGTTCCTCACGGCGCCTaGCTGCACCTTCTCTGGGGGCAGAAGCACGCCTTGGAAAGGTCC +
Preference number: 5 (lower is better)
Translates to: KGHLLPEMLRVPHGA*LHLLWGQKHALERS
Trigger: GGACCTTTCCAAGGCGTGCTTCTGCCCCCAGAGAAGGTGCAGGCAGGCGCCGTGAGGAACACGCAGCATCTCTGGGAGTAAATGTCCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434521.1
CDS-3UTR CAA 90 bp GGTTCCTCAGTTCTGAAGGCTGGGAAAAGGACTGGGAGCAGTGGCCGCATTGGTTCCAATCCAGGTGCCTaGCTGGATCCTCTGCGCCGC +
Preference number: 5 (lower is better)
Translates to: GSSVLKAGKRTGSSGRIGSNPGA*LDPLRR
Trigger: GCGGCGCAGAGGATCCAGCAAGGCACCTGGATTGGA...ACCAATGCGGCCACTGCTCCCAGTCCTTTTCCCAGCCTTCAGAACTGAGGAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434521.1
CDS-3UTR CAA 90 bp GGTTCCTCAGTTCTGAAGGCTGGGAAAAGGACTGGGAGCAGTGGCCGCATTGGTGGAGCAGTGGCCGCATaGGTAGGGTCTGTCGGGGTT +
Preference number: 5 (lower is better)
Translates to: GSSVLKAGKRTGSSGRIGGAVAA*VGSVGV
Trigger: AACCCCGACAGACCCTACCAATGCGGCCACTGCTCC...ACCAATGCGGCCACTGCTCCCAGTCCTTTTCCCAGCCTTCAGAACTGAGGAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434521.1
CDS GCA 90 bp TTGCACTCATTGGGCATCCGCTGGTGTCGGCTCAGCTGGGTGGCCTaGGTGAAGCTCCTCTCACACCTCTCGCACTTGAAGGGCTTTTCT +
Preference number: 5 (lower is better)
Translates to: LHSLGIRWCRLSWVA*VKLLSHLSHLKGFS
Trigger: AGAAAAGCCCTTCAAGTGCGAGAGGTGTGAGAGGAGCTTCACGCAGGCCACCCAGCTGAGCCGACACCAGCGGATGCCCAATGAGTGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS GCA 90 bp GACATTTACTCCCAGAGATGCTGCGTGTTCCTCACGGCGCCTGCCTaGACCTTCTCTGGGGGCAGAAGCACGCCTTGGAAAGGTCCAATC +
Preference number: 5 (lower is better)
Translates to: DIYSQRCCVFLTAPA*TFSGGRSTPWKGPI
Trigger: GATTGGACCTTTCCAAGGCGTGCTTCTGCCCCCAGAGAAGGTGCAGGCAGGCGCCGTGAGGAACACGCAGCATCTCTGGGAGTAAATGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434521.1
CDS CCA 90 bp GTTATTGGCTTGCACTCATTGGGCATCCGCTGGTGTCGGCTCAGCTaGGTGGCCTGCGTGAAGCTCCTCTCACACCTCTCGCACTTGAAG +
Preference number: 5 (lower is better)
Translates to: VIGLHSLGIRWCRLS*VACVKLLSHLSHLK
Trigger: CTTCAAGTGCGAGAGGTGTGAGAGGAGCTTCACGCAGGCCACCCAGCTGAGCCGACACCAGCGGATGCCCAATGAGTGCAAGCCAATAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS CCA 90 bp GATTCTGGGCTCTCAGTTATTGGCTTGCACTCATTGGGCATCCGCTaGTGTCGGCTCAGCTGGGTGGCCTGCGTGAAGCTCCTCTCACAC +
Preference number: 5 (lower is better)
Translates to: DSGLSVIGLHSLGIR*CRLSWVACVKLLSH
Trigger: GTGTGAGAGGAGCTTCACGCAGGCCACCCAGCTGAGCCGACACCAGCGGATGCCCAATGAGTGCAAGCCAATAACTGAGAGCCCAGAATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CAA 90 bp GGCACGACCACAGTAGCCGCACTTGAAAGGCCGGTCACTAGAGTGAGTGACCACGCGAGTTTGCTGCTTTaGTTGAAGGGCTGCAGGGCG +
Preference number: 5 (lower is better)
Translates to: GTTTVAALERPVTRVSDHASLLL*LKGCRA
Trigger: CGCCCTGCAGCCCTTCAACAAAAGCAGCAAACTCGC...GTGGTCACTCACTCTAGTGACCGGCCTTTCAAGTGCGGCTACTGTGGTCGTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434521.1
CDS-3UTR CAA 90 bp CGTGGTTCCTCAGTTCTGAAGGCTGGGAAAAGGACTGGGAGCAGTGGCCGCATTGCTGGCTTGTGGAAGTaGGGCTTGCCAGGACTCGCT +
Preference number: 5 (lower is better)
Translates to: RGSSVLKAGKRTGSSGRIAGLWK*GLPGLA
Trigger: AGCGAGTCCTGGCAAGCCCAACTTCCACAAGCCAGC...AATGCGGCCACTGCTCCCAGTCCTTTTCCCAGCCTTCAGAACTGAGGAACCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434521.1
CDS-3UTR CAA 90 bp AGATGCCAGTCACTGAACTCCGAGTGGAGCTGGCTTGTGGAAGTTGGGCTTGCCCCGAGTGGAGCTGGCTaGTGGAAGTTGGGCTTGCCA +
Preference number: 5 (lower is better)
Translates to: RCQSLNSEWSWLVEVGLAPSGAG*WKLGLP
Trigger: TGGCAAGCCCAACTTCCACAAGCCAGCTCCACTCGG...GGCAAGCCCAACTTCCACAAGCCAGCTCCACTCGGAGTTCAGTGACTGGCATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434521.1
CDS GCA 90 bp TCATATATCTCCCAGAGATGCTGCGTGTTCCTCACGGCGCCTGCCTaGACCTTCTCTGGGGGCAGAAGCACGCCTTGGAAAGGTCCAATC +
Preference number: 5 (lower is better)
Translates to: SYISQRCCVFLTAPA*TFSGGRSTPWKGPI
Trigger: GATTGGACCTTTCCAAGGCGTGCTTCTGCCCCCAGAGAAGGTGCAGGCAGGCGCCGTGAGGAACACGCAGCATCTCTGGGAGATATATGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407847.5
ENST00000464424.1
CDS-3UTR CAA 90 bp ACTCCGAGTGGAGCTGGCTTGTGGAAGTTGGGCTTGCCAGGACTCGCTGGTTTTGGGCAGAAGCACGCCTaGGAAAGGTCCAATCCAGGT +
Preference number: 5 (lower is better)
Translates to: TPSGAGLWKLGLPGLAGFGQKHA*ERSNPG
Trigger: ACCTGGATTGGACCTTTCCAAGGCGTGCTTCTGCCC...AAAACCAGCGAGTCCTGGCAAGCCCAACTTCCACAAGCCAGCTCCACTCGGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434521.1
CDS-3UTR CAA 90 bp ATCATCATTCCCATCAACCTCTGTGGGAATAAGCGCAGAATGTCCTTATTTTTCCGTGGGCTGCTGCGCTaGGCCGCTGCCGCGTCCTGG +
Preference number: 5 (lower is better)
Translates to: IIIPINLCGNKRRMSLFFRGLLR*AAAASW
Trigger: CCAGGACGCGGCAGCGGCCAAGCGCAGCAGCCCACG...GAAAAATAAGGACATTCTGCGCTTATTCCCACAGAGGTTGATGGGAATGATGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CAA 90 bp TCAGTTCTGAAGGCTGGGAAAAGGACTGGGAGCAGTGGCCGCATTGGTAGGGTCTTGTGGAAGTTGGGCTaGCCAGGACTCGCTGGTTTT +
Preference number: 5 (lower is better)
Translates to: SVLKAGKRTGSSGRIGRVLWKLG*PGLAGF
Trigger: AAAACCAGCGAGTCCTGGCAAGCCCAACTTCCACAA...GACCCTACCAATGCGGCCACTGCTCCCAGTCCTTTTCCCAGCCTTCAGAACTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434521.1
CDS GCA 90 bp TCCGTTAATCCACTTCGATTGATTCTGGGCTCTCAGTTATTGGCTTaGACTCATTGGGCATCCGCTGGTGTCGGCTCAGCTGGGTGGCCT +
Preference number: 5 (lower is better)
Translates to: SVNPLRLILGSQLLA*THWASAGVGSAGWP
Trigger: AGGCCACCCAGCTGAGCCGACACCAGCGGATGCCCAATGAGTGCAAGCCAATAACTGAGAGCCCAGAATCAATCGAAGTGGATTAACGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CAA 90 bp GCAATTTCTACCACCCATTTGCTGTATCCCAGGGGACTGTGTGTCCACTTTAAAGGAGCAGTGGCCGCATaGGTAGGGTCTGTCGGGGTT +
Preference number: 5 (lower is better)
Translates to: AISTTHLLYPRGLCVHFKGAVAA*VGSVGV
Trigger: AACCCCGACAGACCCTACCAATGCGGCCACTGCTCC...TTTAAAGTGGACACACAGTCCCCTGGGATACAGCAAATGGGTGGTAGAAATTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CAA 90 bp GACCCAAATGATCTCAGTACCTGCTTCAGGGTTCCAAGTCAATGTCCAGGTGTATCCGTGAGGGAAGAGTaGCTGCCAGTGCTGCAGGTA +
Preference number: 5 (lower is better)
Translates to: DPNDLSTCFRVPSQCPGVSVREE*LPVLQV
Trigger: TACCTGCAGCACTGGCAGCAACTCTTCCCTCACGGA...TACACCTGGACATTGACTTGGAACCCTGAAGCAGGTACTGAGATCATTTGGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CAA 90 bp GCAATTTCTACCACCCATTTGCTGTATCCCAGGGGACTGTGTGTCCACTTTAAAATGTCGCAACGGTTGTaGGGGTCGCTGGTGTGCTGG +
Preference number: 5 (lower is better)
Translates to: AISTTHLLYPRGLCVHFKMSQRL*GSLVCW
Trigger: CCAGCACACCAGCGACCCCAACAACCGTTGCGACAT...TTTAAAGTGGACACACAGTCCCCTGGGATACAGCAAATGGGTGGTAGAAATTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CAA 90 bp TTGATAAAATTAGCTGCTCCTGGGCTATCTGTTCTAACCACAACCTTCTCCATGCACTCGCCGTTGCGGTaGTCCGCGCACATGTCGCAA +
Preference number: 5 (lower is better)
Translates to: LIKLAAPGLSVLTTTFSMHSPLR*SAHMSQ
Trigger: TTGCGACATGTGCGCGGACAACCGCAACGGCGAGTG...CATGGAGAAGGTTGTGGTTAGAACAGATAGCCCAGGAGCAGCTAATTTTATCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CAA 90 bp TTTTCACTTGTGTTTGTAGACATGCTCCTCCCACACTCAGGAGAGAGGAAAGGGGTGGTAGGGGCGAGTTaGCTGCTTTTGTTGAAGGGC +
Preference number: 5 (lower is better)
Translates to: FSLVFVDMLLPHSGERKGVVGAS*LLLLKG
Trigger: GCCCTTCAACAAAAGCAGCAAACTCGCCCCTACCAC...CCCTTTCCTCTCTCCTGAGTGTGGGAGGAGCATGTCTACAAACACAAGTGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CAA 90 bp TTTTCACTTGTGTTTGTAGACATGCTCCTCCCACACTCAGGAGAGAGGAAAGGGGGTGTAAGCCTGTCTTaGTGGACAGACAGCCTAGGC +
Preference number: 5 (lower is better)
Translates to: FSLVFVDMLLPHSGERKGGVSLS*WTDSLG
Trigger: GCCTAGGCTGTCTGTCCACAAAGACAGGCTTACACC...CCCTTTCCTCTCTCCTGAGTGTGGGAGGAGCATGTCTACAAACACAAGTGAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CAA 90 bp CGTAATGACTCCATTGATGCCTGGAAAGTAACTCACTTAGCATTCAGTCAGAACCCGAGTGGAGCTGGCTaGTGGAAGTTGGGCTTGCCA +
Preference number: 5 (lower is better)
Translates to: RNDSIDAWKVTHLAFSQNPSGAG*WKLGLP
Trigger: TGGCAAGCCCAACTTCCACAAGCCAGCTCCACTCGG...GTTCTGACTGAATGCTAAGTGAGTTACTTTCCAGGCATCAATGGAGTCATTACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS GCA 90 bp TACCTCATCCAGCTCGACTTACTAGGTTCCCCACCATCAATAAAGTaGTGTAGTGTCCCATCCTGGTCATATATCTCCCAGAGATGCTGC +
Preference number: 5 (lower is better)
Translates to: YLIQLDLLGSPPSIK*CSVPSWSYISQRCC
Trigger: GCAGCATCTCTGGGAGATATATGACCAGGATGGGACACTACAGCACTTTATTGATGGTGGGGAACCTAGTAAGTCGAGCTGGATGAGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407847.5
ENST00000464424.1
CDS-3UTR CAA 90 bp GAGAAAGTAAGTCTACAAGTGCTGATTTTGTTAACATTAGACAATGCCCACATGCTGCAAGCGAGAAAATaGGGAGGCCCGCGGAGGGCG +
Preference number: 5 (lower is better)
Translates to: EKVSLQVLILLTLDNAHMLQARK*GGPRRA
Trigger: CGCCCTCCGCGGGCCTCCCAATTTTCTCGCTTGCAG...CATGTGGGCATTGTCTAATGTTAACAAAATCAGCACTTGTAGACTTACTTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CAA 90 bp TTAAATCCTGATTCAATGGGCCCAGACTTATCCAGAAGAGAGAAGTTCCTGCTGGTGGTAGGGGCGAGTTaGCTGCTTTTGTTGAAGGGC +
Preference number: 5 (lower is better)
Translates to: LNPDSMGPDLSRREKFLLVVGAS*LLLLKG
Trigger: GCCCTTCAACAAAAGCAGCAAACTCGCCCCTACCAC...CAGCAGGAACTTCTCTCTTCTGGATAAGTCTGGGCCCATTGAATCAGGATTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434521.1
CDS-3UTR CAA 90 bp CGTAATGACTCCATTGATGCCTGGAAAGTAACTCACTTAGCATTCAGTCAGAACATTGGCTTGCACTCATaGGGCATCCGCTGGTGTCGG +
Preference number: 5 (lower is better)
Translates to: RNDSIDAWKVTHLAFSQNIGLHS*GIRWCR
Trigger: CCGACACCAGCGGATGCCCAATGAGTGCAAGCCAAT...GTTCTGACTGAATGCTAAGTGAGTTACTTTCCAGGCATCAATGGAGTCATTACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CAA 90 bp GACCCAAATGATCTCAGTACCTGCTTCAGGGTTCCAAGTCAATGTCCAGGTGTACCATCTCTCATCCTATaGCACCCTGACTTTTCCCTG +
Preference number: 5 (lower is better)
Translates to: DPNDLSTCFRVPSQCPGVPSLIL*HPDFSL
Trigger: CAGGGAAAAGTCAGGGTGCAATAGGATGAGAGATGG...TACACCTGGACATTGACTTGGAACCCTGAAGCAGGTACTGAGATCATTTGGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CAA 90 bp GAGAAAGTAAGTCTACAAGTGCTGATTTTGTTAACATTAGACAATGCCCACATGATAGGGCACTCGCCGTaGCGGTTGTCCGCGCACATG +
Preference number: 5 (lower is better)
Translates to: EKVSLQVLILLTLDNAHMIGHSP*RLSAHM
Trigger: CATGTGCGCGGACAACCGCAACGGCGAGTGCCCTAT...CATGTGGGCATTGTCTAATGTTAACAAAATCAGCACTTGTAGACTTACTTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CAA 90 bp TGGGAGAAACTAGAGAAGTGTACTAGATTGTTCAGAGAAAGTAAGTCTACAAGTTCCAATCCAGGTGCCTaGCTGGATCCTCTGCGCCGC +
Preference number: 5 (lower is better)
Translates to: WEKLEKCTRLFRESKSTSSNPGA*LDPLRR
Trigger: GCGGCGCAGAGGATCCAGCAAGGCACCTGGATTGGA...ACTTGTAGACTTACTTTCTCTGAACAATCTAGTACACTTCTCTAGTTTCTCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CAA 90 bp TGGGATATTGAGATTTTTCTAGAAATGCAAAGGTCTGCAGCTCCATCTCTCATCGGGCAGAAGCACGCCTaGGAAAGGTCCAATCCAGGT +
Preference number: 5 (lower is better)
Translates to: WDIEIFLEMQRSAAPSLIGQKHA*ERSNPG
Trigger: ACCTGGATTGGACCTTTCCAAGGCGTGCTTCTGCCC...GATGAGAGATGGAGCTGCAGACCTTTGCATTTCTAGAAAAATCTCAATATCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CAA 90 bp ATCATCATTCCCATCAACCTCTGTGGGAATAAGCGCAGAATGTCCTTATTTTTCGCGAGTTTGCTGCTTTaGTTGAAGGGCTGCAGGGCG +
Preference number: 5 (lower is better)
Translates to: IIIPINLCGNKRRMSLFFASLLL*LKGCRA
Trigger: CGCCCTGCAGCCCTTCAACAAAAGCAGCAAACTCGC...GAAAAATAAGGACATTCTGCGCTTATTCCCACAGAGGTTGATGGGAATGATGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CAA 90 bp CGTAATGACTCCATTGATGCCTGGAAAGTAACTCACTTAGCATTCAGTCAGAACGGGCTGAAGGTAGCATaGACTCAGCGAAGGCTCTCA +
Preference number: 5 (lower is better)
Translates to: RNDSIDAWKVTHLAFSQNGLKVA*TQRRLS
Trigger: TGAGAGCCTTCGCTGAGTCAATGCTACCTTCAGCCC...GTTCTGACTGAATGCTAAGTGAGTTACTTTCCAGGCATCAATGGAGTCATTACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CAA 90 bp GCAATTTCTACCACCCATTTGCTGTATCCCAGGGGACTGTGTGTCCACTTTAAAATTGCTAAAAGGGCCTaGACGATGGGGTTTGGCACT +
Preference number: 5 (lower is better)
Translates to: AISTTHLLYPRGLCVHFKIAKRA*TMGFGT
Trigger: AGTGCCAAACCCCATCGTCAAGGCCCTTTTAGCAAT...TTTAAAGTGGACACACAGTCCCCTGGGATACAGCAAATGGGTGGTAGAAATTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CAA 90 bp GCAATTTCTACCACCCATTTGCTGTATCCCAGGGGACTGTGTGTCCACTTTAAAATTTCTACCACCCATTaGCTGTATCCCAGGGGACTG +
Preference number: 5 (lower is better)
Translates to: AISTTHLLYPRGLCVHFKISTTH*LYPRGL
Trigger: CAGTCCCCTGGGATACAGCAAATGGGTGGTAGAAAT...TTTAAAGTGGACACACAGTCCCCTGGGATACAGCAAATGGGTGGTAGAAATTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CAA 90 bp TTGATAAAATTAGCTGCTCCTGGGCTATCTGTTCTAACCACAACCTTCTCCATGGCTCTGTCTGGCCAGTaGTACCTGACAGCTGATCTC +
Preference number: 5 (lower is better)
Translates to: LIKLAAPGLSVLTTTFSMALSGQ*YLTADL
Trigger: GAGATCAGCTGTCAGGTACAACTGGCCAGACAGAGC...CATGGAGAAGGTTGTGGTTAGAACAGATAGCCCAGGAGCAGCTAATTTTATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CAA 90 bp TTTTCACTTGTGTTTGTAGACATGCTCCTCCCACACTCAGGAGAGAGGAAAGGGTGTGACCCAATTTCATaGAGCACCACTGTTGAACCA +
Preference number: 5 (lower is better)
Translates to: FSLVFVDMLLPHSGERKGCDPIS*STTVEP
Trigger: TGGTTCAACAGTGGTGCTCAATGAAATTGGGTCACA...CCCTTTCCTCTCTCCTGAGTGTGGGAGGAGCATGTCTACAAACACAAGTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CAA 90 bp GCAATTTCTACCACCCATTTGCTGTATCCCAGGGGACTGTGTGTCCACTTTAAACCTAATCCTGGTCTCTaGATACTGCTGCTAACAACC +
Preference number: 5 (lower is better)
Translates to: AISTTHLLYPRGLCVHFKPNPGL*ILLLTT
Trigger: GGTTGTTAGCAGCAGTATCAAGAGACCAGGATTAGG...TTTAAAGTGGACACACAGTCCCCTGGGATACAGCAAATGGGTGGTAGAAATTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CAA 90 bp TGGGAGAAACTAGAGAAGTGTACTAGATTGTTCAGAGAAAGTAAGTCTACAAGTTCGCTGGTGTGCTGGTaGAGCGGGATGATCTCCATG +
Preference number: 5 (lower is better)
Translates to: WEKLEKCTRLFRESKSTSSLVCW*SGMISM
Trigger: CATGGAGATCATCCCGCTCAACCAGCACACCAGCGA...ACTTGTAGACTTACTTTCTCTGAACAATCTAGTACACTTCTCTAGTTTCTCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CAA 90 bp TTCAGAGAAAGTAAGTCTACAAGTGCTGATTTTGTTAACATTAGACAATGCCCACACATGTCGCAACGGTaGTTGGGGTCGCTGGTGTGC +
Preference number: 5 (lower is better)
Translates to: FRESKSTSADFVNIRQCPHMSQR*LGSLVC
Trigger: GCACACCAGCGACCCCAACAACCGTTGCGACATGTG...TGGGCATTGTCTAATGTTAACAAAATCAGCACTTGTAGACTTACTTTCTCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CAA 90 bp GAGCCAAACCCTGATTCAGCTCTGACAGACTACCTTTCTTATCTTAAATATCCTTTGTGGAAGTTGGGCTaGCCAGGACTCGCTGGTTTT +
Preference number: 5 (lower is better)
Translates to: EPNPDSALTDYLSYLKYPLWKLG*PGLAGF
Trigger: AAAACCAGCGAGTCCTGGCAAGCCCAACTTCCACAA...AGGATATTTAAGATAAGAAAGGTAGTCTGTCAGAGCTGAATCAGGGTTTGGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CAA 90 bp TTCAGAGAAAGTAAGTCTACAAGTGCTGATTTTGTTAACATTAGACAATGCCCAGCTGGCTTGTGGAAGTaGGGCTTGCCAGGACTCGCT +
Preference number: 5 (lower is better)
Translates to: FRESKSTSADFVNIRQCPAGLWK*GLPGLA
Trigger: AGCGAGTCCTGGCAAGCCCAACTTCCACAAGCCAGC...TGGGCATTGTCTAATGTTAACAAAATCAGCACTTGTAGACTTACTTTCTCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CAA 90 bp ATCATCATTCCCATCAACCTCTGTGGGAATAAGCGCAGAATGTCCTTATTTTTCTCACACCTCTCGCACTaGAAGGGCTTTTCTCCAGTG +
Preference number: 5 (lower is better)
Translates to: IIIPINLCGNKRRMSLFFSHLSH*KGFSPV
Trigger: CACTGGAGAAAAGCCCTTCAAGTGCGAGAGGTGTGA...GAAAAATAAGGACATTCTGCGCTTATTCCCACAGAGGTTGATGGGAATGATGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CAA 90 bp GTTTTCCTTAATTCGTTAGTCATCACCTTAGCCTCTGCATTTAAACTGGGGGAACTGGGCTCTCAGTTATaGGCTTGCACTCATTGGGCA +
Preference number: 5 (lower is better)
Translates to: VFLNSLVITLASAFKLGELGSQL*ACTHWA
Trigger: TGCCCAATGAGTGCAAGCCAATAACTGAGAGCCCAG...TTCCCCCAGTTTAAATGCAGAGGCTAAGGTGATGACTAACGAATTAAGGAAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CAA 90 bp GCAATTTCTACCACCCATTTGCTGTATCCCAGGGGACTGTGTGTCCACTTTAAACCTCTCAAAGTCTCCTaGTCTGGGCTATTTTCACTT +
Preference number: 5 (lower is better)
Translates to: AISTTHLLYPRGLCVHFKPLKVS*SGLFSL
Trigger: AAGTGAAAATAGCCCAGACAAGGAGACTTTGAGAGG...TTTAAAGTGGACACACAGTCCCCTGGGATACAGCAAATGGGTGGTAGAAATTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CAA 90 bp TTTTCACTTGTGTTTGTAGACATGCTCCTCCCACACTCAGGAGAGAGGAAAGGGCTAGACTGTTTTCAGTaGGGAGTGATGTACCAAAGT +
Preference number: 5 (lower is better)
Translates to: FSLVFVDMLLPHSGERKGLDCFQ*GVMYQS
Trigger: ACTTTGGTACATCACTCCCAACTGAAAACAGTCTAG...CCCTTTCCTCTCTCCTGAGTGTGGGAGGAGCATGTCTACAAACACAAGTGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CAA 90 bp TTGATAAAATTAGCTGCTCCTGGGCTATCTGTTCTAACCACAACCTTCTCCATGGTGAATGGCTTGAGATaGGGCAACAGAGGTCAGAAT +
Preference number: 5 (lower is better)
Translates to: LIKLAAPGLSVLTTTFSMVNGLR*GNRGQN
Trigger: ATTCTGACCTCTGTTGCCCAATCTCAAGCCATTCAC...CATGGAGAAGGTTGTGGTTAGAACAGATAGCCCAGGAGCAGCTAATTTTATCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CAA 90 bp GCAATTTCTACCACCCATTTGCTGTATCCCAGGGGACTGTGTGTCCACTTTAAAAAGAGTAAAGAAGGATaGCTTCAAGAGCCAAACCCT +
Preference number: 5 (lower is better)
Translates to: AISTTHLLYPRGLCVHFKKSKEG*LQEPNP
Trigger: AGGGTTTGGCTCTTGAAGCAATCCTTCTTTACTCTT...TTTAAAGTGGACACACAGTCCCCTGGGATACAGCAAATGGGTGGTAGAAATTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CAA 90 bp GTTTTCCTTAATTCGTTAGTCATCACCTTAGCCTCTGCATTTAAACTGGGGGAAAACAGGGACTGTGGGTaGGCAGACTTTTGCTCTAAG +
Preference number: 5 (lower is better)
Translates to: VFLNSLVITLASAFKLGENRDCG*ADFCSK
Trigger: CTTAGAGCAAAAGTCTGCCAACCCACAGTCCCTGTT...TTCCCCCAGTTTAAATGCAGAGGCTAAGGTGATGACTAACGAATTAAGGAAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CAA 90 bp GAGAAAGTAAGTCTACAAGTGCTGATTTTGTTAACATTAGACAATGCCCACATGGTTCTCCGCAGTGCCTaGCACATCGGATATACCTCA +
Preference number: 5 (lower is better)
Translates to: EKVSLQVLILLTLDNAHMVLRSA*HIGYTS
Trigger: TGAGGTATATCCGATGTGCAAGGCACTGCGGAGAAC...CATGTGGGCATTGTCTAATGTTAACAAAATCAGCACTTGTAGACTTACTTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CAA 90 bp TGGGATATTGAGATTTTTCTAGAAATGCAAAGGTCTGCAGCTCCATCTCTCATCATGAGAGCAATGAATTaGCTCCTAAACGCAGGCTGC +
Preference number: 5 (lower is better)
Translates to: WDIEIFLEMQRSAAPSLIMRAMN*LLNAGC
Trigger: GCAGCCTGCGTTTAGGAGCAAATTCATTGCTCTCAT...GATGAGAGATGGAGCTGCAGACCTTTGCATTTCTAGAAAAATCTCAATATCCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CAA 90 bp TTCAGAGAAAGTAAGTCTACAAGTGCTGATTTTGTTAACATTAGACAATGCCCACTCTCAGTTATTGGCTaGCACTCATTGGGCATCCGC +
Preference number: 5 (lower is better)
Translates to: FRESKSTSADFVNIRQCPLSVIG*HSLGIR
Trigger: GCGGATGCCCAATGAGTGCAAGCCAATAACTGAGAG...TGGGCATTGTCTAATGTTAACAAAATCAGCACTTGTAGACTTACTTTCTCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CAA 90 bp GTTTTCCTTAATTCGTTAGTCATCACCTTAGCCTCTGCATTTAAACTGGGGGAATTTCACTTAGCCCCGTaGAGGATGTGTTTTTACCTG +
Preference number: 5 (lower is better)
Translates to: VFLNSLVITLASAFKLGEFHLAP*RMCFYL
Trigger: CAGGTAAAAACACATCCTCAACGGGGCTAAGTGAAA...TTCCCCCAGTTTAAATGCAGAGGCTAAGGTGATGACTAACGAATTAAGGAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CAA 90 bp CGTAATGACTCCATTGATGCCTGGAAAGTAACTCACTTAGCATTCAGTCAGAACTACATTTTCTCCAGGTaGGGAGAAACTAGAGAAGTG +
Preference number: 5 (lower is better)
Translates to: RNDSIDAWKVTHLAFSQNYIFSR*GETREV
Trigger: CACTTCTCTAGTTTCTCCCAACCTGGAGAAAATGTA...GTTCTGACTGAATGCTAAGTGAGTTACTTTCCAGGCATCAATGGAGTCATTACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CAA 90 bp ATCATCATTCCCATCAACCTCTGTGGGAATAAGCGCAGAATGTCCTTATTTTTCAACCACACAGTATCCTaGCCTTTTAGTAGTGAGTTC +
Preference number: 5 (lower is better)
Translates to: IIIPINLCGNKRRMSLFFNHTVS*PFSSEF
Trigger: GAACTCACTACTAAAAGGCAAGGATACTGTGTGGTT...GAAAAATAAGGACATTCTGCGCTTATTCCCACAGAGGTTGATGGGAATGATGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CAA 90 bp TGGGAGAAACTAGAGAAGTGTACTAGATTGTTCAGAGAAAGTAAGTCTACAAGTGCTCAGAGGAAATCTTaGGTTTTGCTTAAGTGTCCG +
Preference number: 5 (lower is better)
Translates to: WEKLEKCTRLFRESKSTSAQRKS*VLLKCP
Trigger: CGGACACTTAAGCAAAACCAAAGATTTCCTCTGAGC...ACTTGTAGACTTACTTTCTCTGAACAATCTAGTACACTTCTCTAGTTTCTCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CAA 90 bp ATCATCATTCCCATCAACCTCTGTGGGAATAAGCGCAGAATGTCCTTATTTTTCCATGTTCTTGCAATCTaGACAGGACAAAATAAGTCC +
Preference number: 5 (lower is better)
Translates to: IIIPINLCGNKRRMSLFFHVLAI*TGQNKS
Trigger: GGACTTATTTTGTCCTGTCAAGATTGCAAGAACATG...GAAAAATAAGGACATTCTGCGCTTATTCCCACAGAGGTTGATGGGAATGATGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CAA 90 bp TGGGAGAAACTAGAGAAGTGTACTAGATTGTTCAGAGAAAGTAAGTCTACAAGTGTGGCAGAGAGATCATaGTTAAGGAAAACCTTCCCA +
Preference number: 5 (lower is better)
Translates to: WEKLEKCTRLFRESKSTSVAERS*LRKTFP
Trigger: TGGGAAGGTTTTCCTTAACAATGATCTCTCTGCCAC...ACTTGTAGACTTACTTTCTCTGAACAATCTAGTACACTTCTCTAGTTTCTCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CAA 90 bp TGGGAGAAACTAGAGAAGTGTACTAGATTGTTCAGAGAAAGTAAGTCTACAAGTGTTAATCCACTTCGATaGATTCTGGGCTCTCAGTTA +
Preference number: 5 (lower is better)
Translates to: WEKLEKCTRLFRESKSTSVNPLR*ILGSQL
Trigger: TAACTGAGAGCCCAGAATCAATCGAAGTGGATTAAC...ACTTGTAGACTTACTTTCTCTGAACAATCTAGTACACTTCTCTAGTTTCTCCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CAA 90 bp ATCATCATTCCCATCAACCTCTGTGGGAATAAGCGCAGAATGTCCTTATTTTTCGGTTTGGCACTATTTTaGTTCACATGTTCAACACTT +
Preference number: 5 (lower is better)
Translates to: IIIPINLCGNKRRMSLFFGLALF*FTCSTL
Trigger: AAGTGTTGAACATGTGAACAAAAATAGTGCCAAACC...GAAAAATAAGGACATTCTGCGCTTATTCCCACAGAGGTTGATGGGAATGATGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CAA 90 bp GAGCCAAACCCTGATTCAGCTCTGACAGACTACCTTTCTTATCTTAAATATCCTCAAAGAATAGTGAAATaGTGTGGAGAATTCCTTCTC +
Preference number: 5 (lower is better)
Translates to: EPNPDSALTDYLSYLKYPQRIVK*CGEFLL
Trigger: GAGAAGGAATTCTCCACACAATTTCACTATTCTTTG...AGGATATTTAAGATAAGAAAGGTAGTCTGTCAGAGCTGAATCAGGGTTTGGCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CAA 90 bp TGGGATATTGAGATTTTTCTAGAAATGCAAAGGTCTGCAGCTCCATCTCTCATCCTACAAGTGCTGATTTaGTTAACATTAGACAATGCC +
Preference number: 5 (lower is better)
Translates to: WDIEIFLEMQRSAAPSLILQVLI*LTLDNA
Trigger: GGCATTGTCTAATGTTAACAAAATCAGCACTTGTAG...GATGAGAGATGGAGCTGCAGACCTTTGCATTTCTAGAAAAATCTCAATATCCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CAA 90 bp TGGGATATTGAGATTTTTCTAGAAATGCAAAGGTCTGCAGCTCCATCTCTCATCCTAAGGAGAATAATTTaGCCTCTGGCTTTTGCTATA +
Preference number: 5 (lower is better)
Translates to: WDIEIFLEMQRSAAPSLILRRII*PLAFAI
Trigger: TATAGCAAAAGCCAGAGGCAAAATTATTCTCCTTAG...GATGAGAGATGGAGCTGCAGACCTTTGCATTTCTAGAAAAATCTCAATATCCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CAA 90 bp TGGGAGAAACTAGAGAAGTGTACTAGATTGTTCAGAGAAAGTAAGTCTACAAGTGGGGAAAATACAACTTaGCCTTGGGATATTGAGATT +
Preference number: 5 (lower is better)
Translates to: WEKLEKCTRLFRESKSTSGENTT*PWDIEI
Trigger: AATCTCAATATCCCAAGGCAAAGTTGTATTTTCCCC...ACTTGTAGACTTACTTTCTCTGAACAATCTAGTACACTTCTCTAGTTTCTCCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CAA 90 bp TGGGAGAAACTAGAGAAGTGTACTAGATTGTTCAGAGAAAGTAAGTCTACAAGTTGTGTCTCATTTTTATaGAGGGAAGACAATGGGAAA +
Preference number: 5 (lower is better)
Translates to: WEKLEKCTRLFRESKSTSCVSFL*REDNGK
Trigger: TTTCCCATTGTCTTCCCTCAATAAAAATGAGACACA...ACTTGTAGACTTACTTTCTCTGAACAATCTAGTACACTTCTCTAGTTTCTCCCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CAA 90 bp GAGAAAGTAAGTCTACAAGTGCTGATTTTGTTAACATTAGACAATGCCCACATGACACTATCTGTGCCTTaGACAAACCAAACCTATAAT +
Preference number: 5 (lower is better)
Translates to: EKVSLQVLILLTLDNAHMTLSVP*TNQTYN
Trigger: ATTATAGGTTTGGTTTGTCAAAGGCACAGATAGTGT...CATGTGGGCATTGTCTAATGTTAACAAAATCAGCACTTGTAGACTTACTTTCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS-3UTR CAA 90 bp TGGGAGAAACTAGAGAAGTGTACTAGATTGTTCAGAGAAAGTAAGTCTACAAGTGAGAAGTGTACTAGATaGTTCAGAGAAAGTAAGTCT +
Preference number: 5 (lower is better)
Translates to: WEKLEKCTRLFRESKSTSEKCTR*FRESKS
Trigger: AGACTTACTTTCTCTGAACAATCTAGTACACTTCTC...ACTTGTAGACTTACTTTCTCTGAACAATCTAGTACACTTCTCTAGTTTCTCCCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS CCA 72 bp GGAGGCCCGCGGAGGGCGCGAGAGTGCGGACGGACCTaGGCGCCCGACTCAACCGCCGTGGGCTGCTGCGCT +
Preference number: 6 (lower is better)
Translates to: GGPRRARECGRT*APDSTAVGCCA
Trigger: AGCGCAGCAGCCCACGGCGGTTGAGTCGGGCGCCCAGGTCCGTCCGCACTCTCGCGCCCTCCGCGGGCCTCC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS TCA 72 bp GCGGCGCGCTCAGGAGACCCGCGGCGCCGCTGCCCTTaGGCGGGCCTGCGCCTCCGTGAGGGAAGAGTTGCT +
Preference number: 6 (lower is better)
Translates to: AARSGDPRRRCP*AGLRLREGRVA
Trigger: AGCAACTCTTCCCTCACGGAGGCGCAGGCCCGCTCAAGGGCAGCGGCGCCGCGGGTCTCCTGAGCGCGCCGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS GCA 72 bp GGACGGACCTGGGCGCCCGACTCAACCGCCGTGGGCTaGTGCGCTTGGCCGCTGCCGCGTCCTGGCTCCTTG +
Preference number: 6 (lower is better)
Translates to: GRTWAPDSTAVG*CAWPLPRPGSL
Trigger: CAAGGAGCCAGGACGCGGCAGCGGCCAAGCGCAGCAGCCCACGGCGGTTGAGTCGGGCGCCCAGGTCCGTCC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS GCA 72 bp ACGGCAGCGGCGGCTAGAGGCGCGAACACCGGCAGCTaGGACACCGGCAGGGCCGAGAGACCAGCCAGCGCG +
Preference number: 6 (lower is better)
Translates to: TAAAARGANTGS*DTGRAERPASA
Trigger: CGCGCTGGCTGGTCTCTCGGCCCTGCCGGTGTCGCAGCTGCCGGTGTTCGCGCCTCTAGCCGCCGCTGCCGT
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS CCA 72 bp AGTGCGGACGGACCTGGGCGCCCGACTCAACCGCCGTaGGCTGCTGCGCTTGGCCGCTGCCGCGTCCTGGCT +
Preference number: 6 (lower is better)
Translates to: SADGPGRPTQPP*AAALGRCRVLA
Trigger: AGCCAGGACGCGGCAGCGGCCAAGCGCAGCAGCCCACGGCGGTTGAGTCGGGCGCCCAGGTCCGTCCGCACT
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS TCA 72 bp CTCGGTGCTGCCGGTGGGTGCGTGCGGGTGTCTCGGTaGGCGTGCGGGTGCGCGAGAGTGTGCGCCCTGCGT +
Preference number: 6 (lower is better)
Translates to: LGAAGGCVRVSR*ACGCARVCALR
Trigger: ACGCAGGGCGCACACTCTCGCGCACCCGCACGCTCACCGAGACACCCGCACGCACCCACCGGCAGCACCGAG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS GCA 72 bp CGGACCTGGGCGCCCGACTCAACCGCCGTGGGCTGCTaGGCTTGGCCGCTGCCGCGTCCTGGCTCCTTGGTT +
Preference number: 6 (lower is better)
Translates to: RTWAPDSTAVGC*AWPLPRPGSLV
Trigger: AACCAAGGAGCCAGGACGCGGCAGCGGCCAAGCGCAGCAGCCCACGGCGGTTGAGTCGGGCGCCCAGGTCCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS CCA 72 bp TGGGCGCCCGACTCAACCGCCGTGGGCTGCTGCGCTTaGCCGCTGCCGCGTCCTGGCTCCTTGGTTCCACGC +
Preference number: 6 (lower is better)
Translates to: WAPDSTAVGCCA*PLPRPGSLVPR
Trigger: GCGTGGAACCAAGGAGCCAGGACGCGGCAGCGGCCAAGCGCAGCAGCCCACGGCGGTTGAGTCGGGCGCCCA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS GCA 72 bp CTCGGTGAGCGTGCGGGTGCGCGAGAGTGTGCGCCCTaGGTGCGCTACATGCCCCTGAGCAGCGCGGGAGGA +
Preference number: 6 (lower is better)
Translates to: LGERAGARECAP*VRYMPLSSAGG
Trigger: TCCTCCCGCGCTGCTCAGGGGCATGTAGCGCACGCAGGGCGCACACTCTCGCGCACCCGCACGCTCACCGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS CCA 72 bp CCGCAGCAGCGCAGGAGGAGGCGGAGGAGGCGGAGGTaGAAGAGGAAGCCGGCGTGGACGAGGCGGAGGAGA +
Preference number: 6 (lower is better)
Translates to: PQQRRRRRRRRR*KRKPAWTRRRR
Trigger: TCTCCTCCGCCTCGTCCACGCCGGCTTCCTCTTCCACCTCCGCCTCCTCCGCCTCCTCCTGCGCTGCTGCGG
72% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS GCA 72 bp GCTGGCCATACAGGTAATAGTCCAGCTCCTCTGCGCTaGAGCGGAAGCGCGGGGCGCCGCGACCCTCCCCGC +
Preference number: 6 (lower is better)
Translates to: AGHTGNSPAPLR*SGSAGRRDPPR
Trigger: GCGGGGAGGGTCGCGGCGCCCCGCGCTTCCGCTGCAGCGCAGAGGAGCTGGACTATTACCTGTATGGCCAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS GCA 72 bp GCAGCGCTGCTGGTGCCCACAAGCCGGCGCAGCGAGTaGAGTGGCCCATGCATAGGGCACTCGCCGTTGCGG +
Preference number: 6 (lower is better)
Translates to: AALLVPTSRRSE*SGPCIGHSPLR
Trigger: CCGCAACGGCGAGTGCCCTATGCATGGGCCACTGCACTCGCTGCGCCGGCTTGTGGGCACCAGCAGCGCTGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS GCA 72 bp CGCAGATGCCGTAGGCCAGGCCGGGCACAGTACTGGTaGAGAGGCACACCTCGCGAGGCAGGTCCCGCAGCC +
Preference number: 6 (lower is better)
Translates to: RRCRRPGRAQYW*RGTPREAGPAA
Trigger: GGCTGCGGGACCTGCCTCGCGAGGTGTGCCTCTGCACCAGTACTGTGCCCGGCCTGGCCTACGGCATCTGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407847.5
ENST00000434521.1
ENST00000464424.1
CDS CCA 72 bp CCGCGCAGATGCCGTAGGCCAGGCCGGGCACAGTACTaGTGCAGAGGCACACCTCGCGAGGCAGGTCCCGCA +
Preference number: 6 (lower is better)
Translates to: PRRCRRPGRAQY*CRGTPREAGPA
Trigger: TGCGGGACCTGCCTCGCGAGGTGTGCCTCTGCACCAGTACTGTGCCCGGCCTGGCCTACGGCATCTGCGCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407847.5
ENST00000434521.1
ENST00000464424.1
CDS CAA 72 bp GCCGCCCGGAAACCTCCCGACCTGCAAGCGAGAAAATaGGGAGGCCCGCGGAGGGCGCGAGAGTGCGGACGG +
Preference number: 6 (lower is better)
Translates to: AARKPPDLQARK*GGPRRARECGR
Trigger: CCGTCCGCACTCTCGCGCCCTCCGCGGGCCTCCCAATTTTCTCGCTTGCAGGTCGGGAGGTTTCCGGGCGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS GCA 72 bp GCGCTGCTGGCCATACAGGTAATAGTCCAGCTCCTCTaGGCTGCAGCGGAAGCGCGGGGCGCCGCGACCCTC +
Preference number: 6 (lower is better)
Translates to: ALLAIQVIVQLL*AAAEARGAATL
Trigger: GAGGGTCGCGGCGCCCCGCGCTTCCGCTGCAGCGCAGAGGAGCTGGACTATTACCTGTATGGCCAGCAGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS GCA 72 bp GTGCCCACAAGCCGGCGCAGCGAGTGCAGTGGCCCATaGATAGGGCACTCGCCGTTGCGGTTGTCCGCGCAC +
Preference number: 6 (lower is better)
Translates to: VPTSRRSECSGP*IGHSPLRLSAH
Trigger: GTGCGCGGACAACCGCAACGGCGAGTGCCCTATGCATGGGCCACTGCACTCGCTGCGCCGGCTTGTGGGCAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS CCA 72 bp CCGCCCGGAAACCTCCCGACCTGCAAGCGAGAAAATTaGGAGGCCCGCGGAGGGCGCGAGAGTGCGGACGGA +
Preference number: 6 (lower is better)
Translates to: PPGNLPTCKREN*EARGGRESADG
Trigger: TCCGTCCGCACTCTCGCGCCCTCCGCGGGCCTCCCAATTTTCTCGCTTGCAGGTCGGGAGGTTTCCGGGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS CCA 72 bp GTCCGGCGCCTCGAACTGAAAACTCGGTGCTGCCGGTaGGTGCGTGCGGGTGTCTCGGTGAGCGTGCGGGTG +
Preference number: 6 (lower is better)
Translates to: VRRLELKTRCCR*VRAGVSVSVRV
Trigger: CACCCGCACGCTCACCGAGACACCCGCACGCACCCACCGGCAGCACCGAGTTTTCAGTTCGAGGCGCCGGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS CAA 90 bp AGAGATTGTGCCGCCCGGAAACCTCCCGACCTGCAAGCGAGAAAATaGGGAGGCCCGCGGAGGGCGCGAGAGTGCGGACGGACCTGGGCG +
Preference number: 6 (lower is better)
Translates to: RDCAARKPPDLQARK*GGPRRARECGRTWA
Trigger: CGCCCAGGTCCGTCCGCACTCTCGCGCCCTCCGCGGGCCTCCCAATTTTCTCGCTTGCAGGTCGGGAGGTTTCCGGGCGGCACAATCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS CAA 90 bp GGCGCCGCTGCCCTTGAGCGGGCCTGCGCCTCCGTGAGGGAAGAGTaGCTGCCAGTGCTGCAGGTAGGCTGGGTCCACTTTGAGGAAGGC +
Preference number: 6 (lower is better)
Translates to: GAAALERACASVREE*LPVLQVGWVHFEEG
Trigger: GCCTTCCTCAAAGTGGACCCAGCCTACCTGCAGCACTGGCAGCAACTCTTCCCTCACGGAGGCGCAGGCCCGCTCAAGGGCAGCGGCGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS GCA 72 bp CCTCGAACTGAAAACTCGGTGCTGCCGGTGGGTGCGTaGGGGTGTCTCGGTGAGCGTGCGGGTGCGCGAGAG +
Preference number: 6 (lower is better)
Translates to: PRTENSVLPVGA*GCLGERAGARE
Trigger: CTCTCGCGCACCCGCACGCTCACCGAGACACCCGCACGCACCCACCGGCAGCACCGAGTTTTCAGTTCGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS CCA 72 bp GCTGCTGGTGCCCACAAGCCGGCGCAGCGAGTGCAGTaGCCCATGCATAGGGCACTCGCCGTTGCGGTTGTC +
Preference number: 6 (lower is better)
Translates to: AAGAHKPAQRVQ*PMHRALAVAVV
Trigger: GACAACCGCAACGGCGAGTGCCCTATGCATGGGCCACTGCACTCGCTGCGCCGGCTTGTGGGCACCAGCAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS CAA 90 bp AGCCGGCGCAGCGAGTGCAGTGGCCCATGCATAGGGCACTCGCCGTaGCGGTTGTCCGCGCACATGTCGCAACGGTTGTTGGGGTCGCTG +
Preference number: 6 (lower is better)
Translates to: SRRSECSGPCIGHSP*RLSAHMSQRLLGSL
Trigger: CAGCGACCCCAACAACCGTTGCGACATGTGCGCGGACAACCGCAACGGCGAGTGCCCTATGCATGGGCCACTGCACTCGCTGCGCCGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS CAA 90 bp CTCTGGGGGCAGAAGCACGCCTTGGAAAGGTCCAATCCAGGTGCCTaGCTGGATCCTCTGCGCCGCGCAGATGCCGTAGGCCAGGCCGGG +
Preference number: 6 (lower is better)
Translates to: LWGQKHALERSNPGA*LDPLRRADAVGQAG
Trigger: CCCGGCCTGGCCTACGGCATCTGCGCGGCGCAGAGGATCCAGCAAGGCACCTGGATTGGACCTTTCCAAGGCGTGCTTCTGCCCCCAGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000407847.5
ENST00000434521.1
ENST00000464424.1
CDS TCA 72 bp CGCGAGAGTGTGCGCCCTGCGTGCGCTACATGCCCCTaGGCAGCGCGGGAGGAGAGTCCTAGAGATTGTGCC +
Preference number: 6 (lower is better)
Translates to: RESVRPACATCP*AAREESPRDCA
Trigger: GGCACAATCTCTAGGACTCTCCTCCCGCGCTGCTCAGGGGCATGTAGCGCACGCAGGGCGCACACTCTCGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS GCA 72 bp CAGCATGTCCGGCGCCTCGAACTGAAAACTCGGTGCTaGCGGTGGGTGCGTGCGGGTGTCTCGGTGAGCGTG +
Preference number: 6 (lower is better)
Translates to: QHVRRLELKTRC*RWVRAGVSVSV
Trigger: CACGCTCACCGAGACACCCGCACGCACCCACCGGCAGCACCGAGTTTTCAGTTCGAGGCGCCGGACATGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS GCA 72 bp TCCAGGTGCCTTGCTGGATCCTCTGCGCCGCGCAGATaGCGTAGGCCAGGCCGGGCACAGTACTGGTGCAGA +
Preference number: 6 (lower is better)
Translates to: SRCLAGSSAPRR*RRPGRAQYWCR
Trigger: TCTGCACCAGTACTGTGCCCGGCCTGGCCTACGGCATCTGCGCGGCGCAGAGGATCCAGCAAGGCACCTGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407847.5
ENST00000434521.1
ENST00000464424.1
CDS GCA 72 bp GTCCTAGAGATTGTGCCGCCCGGAAACCTCCCGACCTaGAAGCGAGAAAATTGGGAGGCCCGCGGAGGGCGC +
Preference number: 6 (lower is better)
Translates to: VLEIVPPGNLPT*KRENWEARGGR
Trigger: GCGCCCTCCGCGGGCCTCCCAATTTTCTCGCTTGCAGGTCGGGAGGTTTCCGGGCGGCACAATCTCTAGGAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS GCA 72 bp GGGGCAGAAGCACGCCTTGGAAAGGTCCAATCCAGGTaGCTTGCTGGATCCTCTGCGCCGCGCAGATGCCGT +
Preference number: 6 (lower is better)
Translates to: GAEARLGKVQSR*LAGSSAPRRCR
Trigger: ACGGCATCTGCGCGGCGCAGAGGATCCAGCAAGGCACCTGGATTGGACCTTTCCAAGGCGTGCTTCTGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407847.5
ENST00000434521.1
ENST00000464424.1
CDS CCA 72 bp GTGAGGGAAGAGTTGCTGCCAGTGCTGCAGGTAGGCTaGGTCCACTTTGAGGAAGGCCGAACCGCCGGGGTC +
Preference number: 6 (lower is better)
Translates to: VREELLPVLQVG*VHFEEGRTAGV
Trigger: GACCCCGGCGGTTCGGCCTTCCTCAAAGTGGACCCAGCCTACCTGCAGCACTGGCAGCAACTCTTCCCTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS CAA 72 bp TGCAGTGGCCCATGCATAGGGCACTCGCCGTTGCGGTaGTCCGCGCACATGTCGCAACGGTTGTTGGGGTCG +
Preference number: 6 (lower is better)
Translates to: CSGPCIGHSPLR*SAHMSQRLLGS
Trigger: CGACCCCAACAACCGTTGCGACATGTGCGCGGACAACCGCAACGGCGAGTGCCCTATGCATGGGCCACTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS GCA 72 bp GCGCACATGTCGCAACGGTTGTTGGGGTCGCTGGTGTaGTGGTTGAGCGGGATGATCTCCATGCGCTGCTGG +
Preference number: 6 (lower is better)
Translates to: AHMSQRLLGSLV*WLSGMISMRCW
Trigger: CCAGCAGCGCATGGAGATCATCCCGCTCAACCAGCACACCAGCGACCCCAACAACCGTTGCGACATGTGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS GCA 72 bp TATCTCCCAGAGATGCTGCGTGTTCCTCACGGCGCCTaGCTGCACCTTCTCTGGGGGCAGAAGCACGCCTTG +
Preference number: 6 (lower is better)
Translates to: YLPEMLRVPHGA*LHLLWGQKHAL
Trigger: CAAGGCGTGCTTCTGCCCCCAGAGAAGGTGCAGGCAGGCGCCGTGAGGAACACGCAGCATCTCTGGGAGATA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407847.5
ENST00000464424.1
CDS GCA 72 bp TTGGGCATCCGCTGGTGTCGGCTCAGCTGGGTGGCCTaGGTGAAGCTCCTCTCACACCTCTCGCACTTGAAG +
Preference number: 6 (lower is better)
Translates to: LGIRWCRLSWVA*VKLLSHLSHLK
Trigger: CTTCAAGTGCGAGAGGTGTGAGAGGAGCTTCACGCAGGCCACCCAGCTGAGCCGACACCAGCGGATGCCCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS GCA 72 bp TTACTCCCAGAGATGCTGCGTGTTCCTCACGGCGCCTaGCTGCACCTTCTCTGGGGGCAGAAGCACGCCTTG +
Preference number: 6 (lower is better)
Translates to: LLPEMLRVPHGA*LHLLWGQKHAL
Trigger: CAAGGCGTGCTTCTGCCCCCAGAGAAGGTGCAGGCAGGCGCCGTGAGGAACACGCAGCATCTCTGGGAGTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434521.1
CDS CCA 72 bp CTGCGTGTTCCTCACGGCGCCTGCCTGCACCTTCTCTaGGGGCAGAAGCACGCCTTGGAAAGGTCCAATCCA +
Preference number: 6 (lower is better)
Translates to: LRVPHGACLHLL*GQKHALERSNP
Trigger: TGGATTGGACCTTTCCAAGGCGTGCTTCTGCCCCCAGAGAAGGTGCAGGCAGGCGCCGTGAGGAACACGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407847.5
ENST00000434521.1
ENST00000464424.1
CDS CAA 72 bp AGCGAGTGCAGTGGCCCATGCATAGGGCACTCGCCGTaGCGGTTGTCCGCGCACATGTCGCAACGGTTGTTG +
Preference number: 6 (lower is better)
Translates to: SECSGPCIGHSP*RLSAHMSQRLL
Trigger: CAACAACCGTTGCGACATGTGCGCGGACAACCGCAACGGCGAGTGCCCTATGCATGGGCCACTGCACTCGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS CCA 72 bp CACATGTCGCAACGGTTGTTGGGGTCGCTGGTGTGCTaGTTGAGCGGGATGATCTCCATGCGCTGCTGGCCA +
Preference number: 6 (lower is better)
Translates to: HMSQRLLGSLVC*LSGMISMRCWP
Trigger: TGGCCAGCAGCGCATGGAGATCATCCCGCTCAACCAGCACACCAGCGACCCCAACAACCGTTGCGACATGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS CCA 72 bp CTCTCAGTTATTGGCTTGCACTCATTGGGCATCCGCTaGTGTCGGCTCAGCTGGGTGGCCTGCGTGAAGCTC +
Preference number: 6 (lower is better)
Translates to: LSVIGLHSLGIR*CRLSWVACVKL
Trigger: GAGCTTCACGCAGGCCACCCAGCTGAGCCGACACCAGCGGATGCCCAATGAGTGCAAGCCAATAACTGAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS CAA 72 bp ATGTCGCAACGGTTGTTGGGGTCGCTGGTGTGCTGGTaGAGCGGGATGATCTCCATGCGCTGCTGGCCATAC +
Preference number: 6 (lower is better)
Translates to: MSQRLLGSLVCW*SGMISMRCWPY
Trigger: GTATGGCCAGCAGCGCATGGAGATCATCCCGCTCAACCAGCACACCAGCGACCCCAACAACCGTTGCGACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS CAA 90 bp TCCACTTCGATTGATTCTGGGCTCTCAGTTATTGGCTTGCACTCATaGGGCATCCGCTGGTGTCGGCTCAGCTGGGTGGCCTGCGTGAAG +
Preference number: 6 (lower is better)
Translates to: STSIDSGLSVIGLHS*GIRWCRLSWVACVK
Trigger: CTTCACGCAGGCCACCCAGCTGAGCCGACACCAGCGGATGCCCAATGAGTGCAAGCCAATAACTGAGAGCCCAGAATCAATCGAAGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS CCA 72 bp TTGATTCTGGGCTCTCAGTTATTGGCTTGCACTCATTaGGCATCCGCTGGTGTCGGCTCAGCTGGGTGGCCT +
Preference number: 6 (lower is better)
Translates to: LILGSQLLACTH*ASAGVGSAGWP
Trigger: AGGCCACCCAGCTGAGCCGACACCAGCGGATGCCCAATGAGTGCAAGCCAATAACTGAGAGCCCAGAATCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS CAA 72 bp ATTGATTCTGGGCTCTCAGTTATTGGCTTGCACTCATaGGGCATCCGCTGGTGTCGGCTCAGCTGGGTGGCC +
Preference number: 6 (lower is better)
Translates to: IDSGLSVIGLHS*GIRWCRLSWVA
Trigger: GGCCACCCAGCTGAGCCGACACCAGCGGATGCCCAATGAGTGCAAGCCAATAACTGAGAGCCCAGAATCAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS GCA 72 bp CCACTTCGATTGATTCTGGGCTCTCAGTTATTGGCTTaGACTCATTGGGCATCCGCTGGTGTCGGCTCAGCT +
Preference number: 6 (lower is better)
Translates to: PLRLILGSQLLA*THWASAGVGSA
Trigger: AGCTGAGCCGACACCAGCGGATGCCCAATGAGTGCAAGCCAATAACTGAGAGCCCAGAATCAATCGAAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS CAA 72 bp TCCACTTCGATTGATTCTGGGCTCTCAGTTATTGGCTaGCACTCATTGGGCATCCGCTGGTGTCGGCTCAGC +
Preference number: 6 (lower is better)
Translates to: STSIDSGLSVIG*HSLGIRWCRLS
Trigger: GCTGAGCCGACACCAGCGGATGCCCAATGAGTGCAAGCCAATAACTGAGAGCCCAGAATCAATCGAAGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS CAA 90 bp AGTCAATCCGTTAATCCACTTCGATTGATTCTGGGCTCTCAGTTATaGGCTTGCACTCATTGGGCATCCGCTGGTGTCGGCTCAGCTGGG +
Preference number: 6 (lower is better)
Translates to: SQSVNPLRLILGSQL*ACTHWASAGVGSAG
Trigger: CCCAGCTGAGCCGACACCAGCGGATGCCCAATGAGTGCAAGCCAATAACTGAGAGCCCAGAATCAATCGAAGTGGATTAACGGATTGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS CAA 72 bp GTTAATCCACTTCGATTGATTCTGGGCTCTCAGTTATaGGCTTGCACTCATTGGGCATCCGCTGGTGTCGGC +
Preference number: 6 (lower is better)
Translates to: VNPLRLILGSQL*ACTHWASAGVG
Trigger: GCCGACACCAGCGGATGCCCAATGAGTGCAAGCCAATAACTGAGAGCCCAGAATCAATCGAAGTGGATTAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS GCA 72 bp CAGCTCGACTTACTAGGTTCCCCACCATCAATAAAGTaGTGTAGTGTCCCATCCTGGTCATATATCTCCCAG +
Preference number: 6 (lower is better)
Translates to: QLDLLGSPPSIK*CSVPSWSYISQ
Trigger: CTGGGAGATATATGACCAGGATGGGACACTACAGCACTTTATTGATGGTGGGGAACCTAGTAAGTCGAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407847.5
ENST00000464424.1
CDS CAA 90 bp CCTTGCAGTTTAATTCCAACCAGTCAATCCGTTAATCCACTTCGATaGATTCTGGGCTCTCAGTTATTGGCTTGCACTCATTGGGCATCC +
Preference number: 6 (lower is better)
Translates to: PCSLIPTSQSVNPLR*ILGSQLLACTHWAS
Trigger: GGATGCCCAATGAGTGCAAGCCAATAACTGAGAGCCCAGAATCAATCGAAGTGGATTAACGGATTGACTGGTTGGAATTAAACTGCAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5
CDS CAA 72 bp TTAATTCCAACCAGTCAATCCGTTAATCCACTTCGATaGATTCTGGGCTCTCAGTTATTGGCTTGCACTCAT +
Preference number: 6 (lower is better)
Translates to: LIPTSQSVNPLR*ILGSQLLACTH
Trigger: ATGAGTGCAAGCCAATAACTGAGAGCCCAGAATCAATCGAAGTGGATTAACGGATTGACTGGTTGGAATTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407847.5