Pregenerated sensors for PPRC1 (Homo sapiens)
Ensembl gene IDs: ENSG00000148840Ensembl transcript IDs: ENST00000278070.7, ENST00000370012.1, ENST00000413464.6, ENST00000462933.1, ENST00000489648.5, ENST00000495914.1
Found 157 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 72 bp | TTTATTAGTCTGCATAGTGACTTATGTTCCAAACACTaGGGATCCCCTCAGCCCCTCCTATCTTACATAGGA | + |
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Preference number: 3 (lower is better) Translates to: FISLHSDLCSKH*GSPQPLLSYIG Trigger: TCCTATGTAAGATAGGAGGGGCTGAGGGGATCCCCAGTGTTTGGAACATAAGTCACTATGCAGACTAATAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000413464.6 |
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| CDS TCA 90 bp | CGCGACTCCGTCTCTCCGTCCCCGGCGCGCCGCCATCTTGGCCCCTaGACACCCAGCGCTGCTCTGATCGCTGGCGCCGCCTCGCCCAGC | + |
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Preference number: 5 (lower is better) Translates to: RDSVSPSPARRHLGP*TPSAALIAGAASPS Trigger: GCTGGGCGAGGCGGCGCCAGCGATCAGAGCAGCGCTGGGTGTTCAGGGGCCAAGATGGCGGCGCGCCGGGGACGGAGAGACGGAGTCGCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000413464.6 |
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| CDS GCA 90 bp | TCCGTCCCCGGCGCGCCGCCATCTTGGCCCCTGAACACCCAGCGCTaGTCTGATCGCTGGCGCCGCCTCGCCCAGCCGATTGTGGGAAAG | + |
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Preference number: 5 (lower is better) Translates to: SVPGAPPSWPLNTQR*SDRWRRLAQPIVGK Trigger: CTTTCCCACAATCGGCTGGGCGAGGCGGCGCCAGCGATCAGAGCAGCGCTGGGTGTTCAGGGGCCAAGATGGCGGCGCGCCGGGGACGGA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000413464.6 |
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| CDS CCA 90 bp | ACCTGCTCGCCGCCGCTCACAGCGCCCAAAGTCCCATACGGCGCTTaGCTTCGACTTCCCCAACCACTGCCGCGGGCTCCCCCGCCAGGG | + |
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Preference number: 5 (lower is better) Translates to: TCSPPLTAPKVPYGA*LRLPQPLPRAPPPG Trigger: CCCTGGCGGGGGAGCCCGCGGCAGTGGTTGGGGAAGTCGAAGCCAAGCGCCGTATGGGACTTTGGGCGCTGTGAGCGGCGGCGAGCAGGT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000413464.6 |
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| CDS TCA 90 bp | CCCCGGCGCGCCGCCATCTTGGCCCCTGAACACCCAGCGCTGCTCTaGTCGCTGGCGCCGCCTCGCCCAGCCGATTGTGGGAAAGGAACT | + |
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Preference number: 5 (lower is better) Translates to: PRRAAILAPEHPALL*SLAPPRPADCGKGT Trigger: AGTTCCTTTCCCACAATCGGCTGGGCGAGGCGGCGCCAGCGATCAGAGCAGCGCTGGGTGTTCAGGGGCCAAGATGGCGGCGCGCCGGGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000413464.6 |
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| CDS TCA 90 bp | GCAAGGCAGGGTGCTGAGGGATCTGCCTGCTCACTGCTAGTCCTGTaGTCAAGCGGCTCCCGGGAGGCAGCTATGCATGGGGGCGGAGGG | + |
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Preference number: 5 (lower is better) Translates to: ARQGAEGSACSLLVL*SSGSREAAMHGGGG Trigger: CCCTCCGCCCCCATGCATAGCTGCCTCCCGGGAGCCGCTTGATCACAGGACTAGCAGTGAGCAGGCAGATCCCTCAGCACCCTGCCTTGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000370012.1 |
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| CDS GCA 90 bp | CCCAGCCGAGAGAGACTGACAAAGCCAGAATCACCCGCCTCCTCATaGAGCAGCACCTGCTCGCCGCCGCTCACAGCGCCCAAAGTCCCA | + |
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Preference number: 5 (lower is better) Translates to: PSRERLTKPESPASS*SSTCSPPLTAPKVP Trigger: TGGGACTTTGGGCGCTGTGAGCGGCGGCGAGCAGGTGCTGCTGCATGAGGAGGCGGGTGATTCTGGCTTTGTCAGTCTCTCTCGGCTGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000413464.6 |
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| CDS CCA 90 bp | CAGGAGCACAGGCCGGGGTCCAGGAGAGACCTGTCGCACCACAACTaGGATCTCCAGGTCATCGCCAGCTGTGGCTGCCTGCCCCACAAT | + |
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Preference number: 5 (lower is better) Translates to: QEHRPGSRRDLSHHN*DLQVIASCGCLPHN Trigger: ATTGTGGGGCAGGCAGCCACAGCTGGCGATGACCTGGAGATCCCAGTTGTGGTGCGACAGGTCTCTCCTGGACCCCGGCCTGTGCTCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000413464.6 |
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| CDS CCA 90 bp | CCTGCCCTTTCGAGCTCTCTGGGAACCTGGTGCTGCATTGGCAGGTaGGTTCTGAGGCTCCTTGGGCACCACCGGCTCCACGACCTCCCT | + |
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Preference number: 5 (lower is better) Translates to: PALSSSLGTWCCIGR*VLRLLGHHRLHDLP Trigger: AGGGAGGTCGTGGAGCCGGTGGTGCCCAAGGAGCCTCAGAACCCACCTGCCAATGCAGCACCAGGTTCCCAGAGAGCTCGAAAGGGCAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000413464.6 |
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| CDS CCA 90 bp | AAGCGGCTCCCGGGAGGCAGCTATGCATGGGGGCGGAGGGGCAGCTaGGCCCAAGGACAAGACAGGTTTGATGGTGATGTCCTGATGGCG | + |
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Preference number: 5 (lower is better) Translates to: KRLPGGSYAWGRRGS*AQGQDRFDGDVLMA Trigger: CGCCATCAGGACATCACCATCAAACCTGTCTTGTCCTTGGGCCCAGCTGCCCCTCCGCCCCCATGCATAGCTGCCTCCCGGGAGCCGCTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000370012.1 |
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| CDS TCA 90 bp | TTTCGAGCTCTCTGGGAACCTGGTGCTGCATTGGCAGGTGGGTTCTaGGGCTCCTTGGGCACCACCGGCTCCACGACCTCCCTGGGCTTC | + |
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Preference number: 5 (lower is better) Translates to: FRALWEPGAALAGGF*GSLGTTGSTTSLGF Trigger: GAAGCCCAGGGAGGTCGTGGAGCCGGTGGTGCCCAAGGAGCCTCAGAACCCACCTGCCAATGCAGCACCAGGTTCCCAGAGAGCTCGAAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000413464.6 |
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| CDS TCA 90 bp | GGAGATGCAGGCACTGGCTTGACCTCCACCTTGGTAGGCTCTGTCTaGGGAGCTCCATGGCCAGGTAGCCCAAGACTGAGGGGAGGAGCC | + |
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Preference number: 5 (lower is better) Translates to: GDAGTGLTSTLVGSV*GAPWPGSPRLRGGA Trigger: GGCTCCTCCCCTCAGTCTTGGGCTACCTGGCCATGGAGCTCCTCAGACAGAGCCTACCAAGGTGGAGGTCAAGCCAGTGCCTGCATCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000278070.7 ENST00000370012.1 ENST00000413464.6 |
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| CDS GCA 90 bp | CTGTCGCACCACAACTGGGATCTCCAGGTCATCGCCAGCTGTGGCTaGCTGCCCCACAATCTCCAGCACTACGCAGCCCTCAGGCAGTGT | + |
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Preference number: 5 (lower is better) Translates to: LSHHNWDLQVIASCG*LPHNLQHYAALRQC Trigger: ACACTGCCTGAGGGCTGCGTAGTGCTGGAGATTGTGGGGCAGGCAGCCACAGCTGGCGATGACCTGGAGATCCCAGTTGTGGTGCGACAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000413464.6 |
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| CDS CCA 90 bp | AGACCTGTCGCACCACAACTGGGATCTCCAGGTCATCGCCAGCTGTaGCTGCCTGCCCCACAATCTCCAGCACTACGCAGCCCTCAGGCA | + |
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Preference number: 5 (lower is better) Translates to: RPVAPQLGSPGHRQL*LPAPQSPALRSPQA Trigger: TGCCTGAGGGCTGCGTAGTGCTGGAGATTGTGGGGCAGGCAGCCACAGCTGGCGATGACCTGGAGATCCCAGTTGTGGTGCGACAGGTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000413464.6 |
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| CDS CCA 90 bp | ACTGCTAGTCCTGTGATCAAGCGGCTCCCGGGAGGCAGCTATGCATaGGGGCGGAGGGGCAGCTGGGCCCAAGGACAAGACAGGTTTGAT | + |
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Preference number: 5 (lower is better) Translates to: TASPVIKRLPGGSYA*GRRGSWAQGQDRFD Trigger: ATCAAACCTGTCTTGTCCTTGGGCCCAGCTGCCCCTCCGCCCCCATGCATAGCTGCCTCCCGGGAGCCGCTTGATCACAGGACTAGCAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000370012.1 |
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| CDS TCA 90 bp | CATCTGGCTGCTCCTGAAGCTCATCCTCAAGTGATGCCAGGTGGGTaGGGTTGGGCAGGCAGTATGGGTGCATGGCCCGCACCAGCTCAC | + |
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Preference number: 5 (lower is better) Translates to: HLAAPEAHPQVMPGG*GWAGSMGAWPAPAH Trigger: GTGAGCTGGTGCGGGCCATGCACCCATACTGCCTGCCCAACCTCACCCACCTGGCATCACTTGAGGATGAGCTTCAGGAGCAGCCAGATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000413464.6 |
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| CDS GCA 90 bp | GGCAGTATGGGTGCATGGCCCGCACCAGCTCACTCAGGGAGGAGATaGTCTCATCACCAGCTGCTGGCACTGCCATCTCTGCTGCTGTTG | + |
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Preference number: 5 (lower is better) Translates to: GSMGAWPAPAHSGRR*SHHQLLALPSLLLL Trigger: CAACAGCAGCAGAGATGGCAGTGCCAGCAGCTGGTGATGAGAGCATCTCCTCCCTGAGTGAGCTGGTGCGGGCCATGCACCCATACTGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000413464.6 |
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| CDS GCA 90 bp | CGCACCACAACTGGGATCTCCAGGTCATCGCCAGCTGTGGCTGCCTaGCCCACAATCTCCAGCACTACGCAGCCCTCAGGCAGTGTCAAA | + |
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Preference number: 5 (lower is better) Translates to: RTTTGISRSSPAVAA*PTISSTTQPSGSVK Trigger: TTTGACACTGCCTGAGGGCTGCGTAGTGCTGGAGATTGTGGGGCAGGCAGCCACAGCTGGCGATGACCTGGAGATCCCAGTTGTGGTGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000413464.6 |
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| CDS GCA 90 bp | GCTCTTCTTCTTCCTGCCCTTTCGAGCTCTCTGGGAACCTGGTGCTaGATTGGCAGGTGGGTTCTGAGGCTCCTTGGGCACCACCGGCTC | + |
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Preference number: 5 (lower is better) Translates to: ALLLPALSSSLGTWC*IGRWVLRLLGHHRL Trigger: GAGCCGGTGGTGCCCAAGGAGCCTCAGAACCCACCTGCCAATGCAGCACCAGGTTCCCAGAGAGCTCGAAAGGGCAGGAAGAAGAAGAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000413464.6 |
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| CDS CCA 90 bp | TCTTCTTCCTGCCCTTTCGAGCTCTCTGGGAACCTGGTGCTGCATTaGCAGGTGGGTTCTGAGGCTCCTTGGGCACCACCGGCTCCACGA | + |
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Preference number: 5 (lower is better) Translates to: SSSCPFELSGNLVLH*QVGSEAPWAPPAPR Trigger: TCGTGGAGCCGGTGGTGCCCAAGGAGCCTCAGAACCCACCTGCCAATGCAGCACCAGGTTCCCAGAGAGCTCGAAAGGGCAGGAAGAAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000413464.6 |
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| CDS TCA 90 bp | GAACCACTGCAGGGTCAACTGCTGCTGAGTCAGCCAGGACTGGGTTaGTCAGCACTGGCTCAGCCGGGAGAGGCTCAACCAGTTCTGAGC | + |
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Preference number: 5 (lower is better) Translates to: EPLQGQLLLSQPGLG*SALAQPGEAQPVLS Trigger: GCTCAGAACTGGTTGAGCCTCTCCCGGCTGAGCCAGTGCTGATCAACCCAGTCCTGGCTGACTCAGCAGCAGTTGACCCTGCAGTGGTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000413464.6 |
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| CDS GCA 90 bp | TCCTCAAGTGATGCCAGGTGGGTGAGGTTGGGCAGGCAGTATGGGTaGATGGCCCGCACCAGCTCACTCAGGGAGGAGATGCTCTCATCA | + |
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Preference number: 5 (lower is better) Translates to: SSSDARWVRLGRQYG*MARTSSLREEMLSS Trigger: TGATGAGAGCATCTCCTCCCTGAGTGAGCTGGTGCGGGCCATGCACCCATACTGCCTGCCCAACCTCACCCACCTGGCATCACTTGAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000413464.6 |
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| CDS GCA 90 bp | CTTGCTCTTCTTCTTCCTGCCCTTTCGAGCTCTCTGGGAACCTGGTaGTGCATTGGCAGGTGGGTTCTGAGGCTCCTTGGGCACCACCGG | + |
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Preference number: 5 (lower is better) Translates to: LALLLPALSSSLGTW*CIGRWVLRLLGHHR Trigger: CCGGTGGTGCCCAAGGAGCCTCAGAACCCACCTGCCAATGCAGCACCAGGTTCCCAGAGAGCTCGAAAGGGCAGGAAGAAGAAGAGCAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000413464.6 |
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| CDS GCA 90 bp | GGAGGGGAAGGTCTCGCCAACAGTGGCATCTCCTGGGATGGCACCTaGTCAGTGGGAGATGAGGCCACAGGTTTGCTTACAGGTGGCTCA | + |
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Preference number: 5 (lower is better) Translates to: GGEGLANSGISWDGT*SVGDEATGLLTGGS Trigger: TGAGCCACCTGTAAGCAAACCTGTGGCCTCATCTCCCACTGAGCAGGTGCCATCCCAGGAGATGCCACTGTTGGCGAGACCTTCCCCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000413464.6 |
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| CDS CCA 90 bp | AGGTTGGGGAACAGCTCTCCCAATGGAGGCTGGAGGCAAAGGAGGTaGGGGAACAGTAGACCAGAATGGAGCATGTTGAGGCCCTGGGCC | + |
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Preference number: 5 (lower is better) Translates to: RLGNSSPNGGWRQRR*GNSRPEWSMLRPWA Trigger: GGCCCAGGGCCTCAACATGCTCCATTCTGGTCTACTGTTCCCCCACCTCCTTTGCCTCCAGCCTCCATTGGGAGAGCTGTTCCCCAACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000413464.6 |
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| CDS TCA 90 bp | CGCCAACAGTGGCATCTCCTGGGATGGCACCTGCTCAGTGGGAGATaGGGCCACAGGTTTGCTTACAGGTGGCTCAGGACTAGGAGAAGC | + |
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Preference number: 5 (lower is better) Translates to: RQQWHLLGWHLLSGR*GHRFAYRWLRTRRS Trigger: GCTTCTCCTAGTCCTGAGCCACCTGTAAGCAAACCTGTGGCCTCATCTCCCACTGAGCAGGTGCCATCCCAGGAGATGCCACTGTTGGCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000413464.6 |
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| CDS GCA 90 bp | GGGACTTTGCACCAGGGCAGACACCTTGTGTTTCGGATGGGGAGATaGAGGCACTGGCTTGACCTCCACCTTGGTAGGCTCTGTCTGAGG | + |
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Preference number: 5 (lower is better) Translates to: GTLHQGRHLVFRMGR*RHWLDLHLGRLCLR Trigger: CCTCAGACAGAGCCTACCAAGGTGGAGGTCAAGCCAGTGCCTGCATCTCCCCATCCGAAACACAAGGTGTCTGCCCTGGTGCAAAGTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000278070.7 ENST00000370012.1 ENST00000413464.6 |
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| CDS GCA 90 bp | TGCCTTCGGCCCCCAAAGCAGAGATCAAAGGGCTGCTCATCTGCCTaGCGCAGCTTGTGGCCACTCTCAATGGCTGCAAATGCCTCCTCA | + |
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Preference number: 5 (lower is better) Translates to: CLRPPKQRSKGCSSA*RSLWPLSMAANASS Trigger: TGAGGAGGCATTTGCAGCCATTGAGAGTGGCCACAAGCTGCGGCAGGCAGATGAGCAGCCCTTTGATCTCTGCTTTGGGGGCCGAAGGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000278070.7 ENST00000370012.1 ENST00000413464.6 ENST00000495914.1 |
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| CDS GCA 90 bp | GAACTGCCTTCGGCCCCCAAAGCAGAGATCAAAGGGCTGCTCATCTaGCTGCCGCAGCTTGTGGCCACTCTCAATGGCTGCAAATGCCTC | + |
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Preference number: 5 (lower is better) Translates to: ELPSAPKAEIKGLLI*LPQLVATLNGCKCL Trigger: GAGGCATTTGCAGCCATTGAGAGTGGCCACAAGCTGCGGCAGGCAGATGAGCAGCCCTTTGATCTCTGCTTTGGGGGCCGAAGGCAGTTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000278070.7 ENST00000370012.1 ENST00000413464.6 ENST00000495914.1 |
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| CDS CCA 90 bp | CTCCTTGCTCTTCTTCTTCCTGCCCTTTCGAGCTCTCTGGGAACCTaGTGCTGCATTGGCAGGTGGGTTCTGAGGCTCCTTGGGCACCAC | + |
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Preference number: 5 (lower is better) Translates to: LLALLLPALSSSLGT*CCIGRWVLRLLGHH Trigger: GTGGTGCCCAAGGAGCCTCAGAACCCACCTGCCAATGCAGCACCAGGTTCCCAGAGAGCTCGAAAGGGCAGGAAGAAGAAGAGCAAGGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000413464.6 |
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| CDS CCA 90 bp | TGGGATGACAAGACAAGGGATGTCTGCCAGCCCTGTGGGAGTCTCTaGAAGGCTAGGCCACTTCCCAGTTGGGGGCTGTGGACTTCTCTC | + |
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Preference number: 5 (lower is better) Translates to: WDDKTRDVCQPCGSL*KARPLPSWGLWTSL Trigger: GAGAGAAGTCCACAGCCCCCAACTGGGAAGTGGCCTAGCCTTCCAGAGACTCCCACAGGGCTGGCAGACATCCCTTGTCTTGTCATCCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000413464.6 |
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| CDS CCA 90 bp | ACAGACTGCACAGGAGGGGAAGGTCTCGCCAACAGTGGCATCTCCTaGGATGGCACCTGCTCAGTGGGAGATGAGGCCACAGGTTTGCTT | + |
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Preference number: 5 (lower is better) Translates to: TDCTGGEGLANSGIS*DGTCSVGDEATGLL Trigger: AAGCAAACCTGTGGCCTCATCTCCCACTGAGCAGGTGCCATCCCAGGAGATGCCACTGTTGGCGAGACCTTCCCCTCCTGTGCAGTCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000413464.6 |
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| CDS CCA 90 bp | CACCAGGGCAGACACCTTGTGTTTCGGATGGGGAGATGCAGGCACTaGCTTGACCTCCACCTTGGTAGGCTCTGTCTGAGGAGCTCCATG | + |
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Preference number: 5 (lower is better) Translates to: HQGRHLVFRMGRCRH*LDLHLGRLCLRSSM Trigger: CATGGAGCTCCTCAGACAGAGCCTACCAAGGTGGAGGTCAAGCCAGTGCCTGCATCTCCCCATCCGAAACACAAGGTGTCTGCCCTGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000278070.7 ENST00000370012.1 ENST00000413464.6 |
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| CDS CCA 90 bp | GACTCGACTAGGGCCATGGACCCCTTCTTGGAGGCGAACTGCAGCTaGATGTTTGGCCTCCGTAACTCCTTCAGGCTTCAGGGTTCCCTC | + |
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Preference number: 5 (lower is better) Translates to: DSTRAMDPFLEANCS*MFGLRNSFRLQGSL Trigger: GAGGGAACCCTGAAGCCTGAAGGAGTTACGGAGGCCAAACATCCAGCTGCAGTTCGCCTCCAAGAAGGGGTCCATGGCCCTAGTCGAGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000370012.1 |
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| CDS TCA 90 bp | AGCACTACGCAGCCCTCAGGCAGTGTCAAATCATCTGGCTGCTCCTaGAGCTCATCCTCAAGTGATGCCAGGTGGGTGAGGTTGGGCAGG | + |
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Preference number: 5 (lower is better) Translates to: STTQPSGSVKSSGCS*SSSSSDARWVRLGR Trigger: CCTGCCCAACCTCACCCACCTGGCATCACTTGAGGATGAGCTTCAGGAGCAGCCAGATGATTTGACACTGCCTGAGGGCTGCGTAGTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000413464.6 |
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| CDS TCA 90 bp | CTGAGAGGTCACTTCTGTACCTACAGTAGACTGCCCGCGAGAAGATaGCCTCAGCCTCCTGGCATAGCCTTCCACACAGGCTGCTGGCTG | + |
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Preference number: 5 (lower is better) Translates to: LRGHFCTYSRLPARR*PQPPGIAFHTGCWL Trigger: CAGCCAGCAGCCTGTGTGGAAGGCTATGCCAGGAGGCTGAGGTCATCTTCTCGCGGGCAGTCTACTGTAGGTACAGAAGTGACCTCTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000413464.6 |
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| CDS TCA 90 bp | GGGGCAGCTGGGCCCAAGGACAAGACAGGTTTGATGGTGATGTCCTaGTGGCGCTTGACATTCCATCGGGAGCCCACCTCTGGAATGACT | + |
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Preference number: 5 (lower is better) Translates to: GAAGPKDKTGLMVMS*WRLTFHREPTSGMT Trigger: AGTCATTCCAGAGGTGGGCTCCCGATGGAATGTCAAGCGCCATCAGGACATCACCATCAAACCTGTCTTGTCCTTGGGCCCAGCTGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000370012.1 |
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| CDS GCA 90 bp | GTTGGGGGCTGTGGACTTCTCTCTTCTGTTTCTGCTTGGCGTTGCTaGCTTCGTCGCCGGTACTCAGATAAGCTGAGAGGCCGAGGTCTG | + |
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Preference number: 5 (lower is better) Translates to: VGGCGLLSSVSAWRC*LRRRYSDKLRGRGL Trigger: CAGACCTCGGCCTCTCAGCTTATCTGAGTACCGGCGACGAAGGCAGCAACGCCAAGCAGAAACAGAAGAGAGAAGTCCACAGCCCCCAAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000413464.6 |
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| CDS GCA 90 bp | CCAGTTGGGGGCTGTGGACTTCTCTCTTCTGTTTCTGCTTGGCGTTaGTGCCTTCGTCGCCGGTACTCAGATAAGCTGAGAGGCCGAGGT | + |
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Preference number: 5 (lower is better) Translates to: PVGGCGLLSSVSAWR*CLRRRYSDKLRGRG Trigger: ACCTCGGCCTCTCAGCTTATCTGAGTACCGGCGACGAAGGCAGCAACGCCAAGCAGAAACAGAAGAGAGAAGTCCACAGCCCCCAACTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000413464.6 |
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| CDS GCA 90 bp | CACATGGACTCGACTAGGGCCATGGACCCCTTCTTGGAGGCGAACTaGAGCTGGATGTTTGGCCTCCGTAACTCCTTCAGGCTTCAGGGT | + |
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Preference number: 5 (lower is better) Translates to: HMDSTRAMDPFLEAN*SWMFGLRNSFRLQG Trigger: ACCCTGAAGCCTGAAGGAGTTACGGAGGCCAAACATCCAGCTGCAGTTCGCCTCCAAGAAGGGGTCCATGGCCCTAGTCGAGTCCATGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000370012.1 |
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| CDS CCA 90 bp | CCGCACCAGCTCACTCAGGGAGGAGATGCTCTCATCACCAGCTGCTaGCACTGCCATCTCTGCTGCTGTTGCTTTATCTTCCTCCTCAGG | + |
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Preference number: 5 (lower is better) Translates to: PHQLTQGGDALITSC*HCHLCCCCFIFLLR Trigger: CCTGAGGAGGAAGATAAAGCAACAGCAGCAGAGATGGCAGTGCCAGCAGCTGGTGATGAGAGCATCTCCTCCCTGAGTGAGCTGGTGCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000413464.6 |
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| CDS CCA 90 bp | CTGGGCCAGACGGGACAGCATCAACTGGTGGCAAGTTATCTGAGATaGGAACCACTGCAGGGTCAACTGCTGCTGAGTCAGCCAGGACTG | + |
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Preference number: 5 (lower is better) Translates to: LGQTGQHQLVASYLR*EPLQGQLLLSQPGL Trigger: CAGTCCTGGCTGACTCAGCAGCAGTTGACCCTGCAGTGGTTCCCATCTCAGATAACTTGCCACCAGTTGATGCTGTCCCGTCTGGCCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000413464.6 |
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| CDS CCA 90 bp | CTCAAGGGGTGTTTCAGGGCTTCTCTGCAGAGCTGTCTTCTTGGCTaGGGCTGGTGGGATGACAAGACAAGGGATGTCTGCCAGCCCTGT | + |
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Preference number: 5 (lower is better) Translates to: LKGCFRASLQSCLLG*GWWDDKTRDVCQPC Trigger: ACAGGGCTGGCAGACATCCCTTGTCTTGTCATCCCACCAGCCCCAGCCAAGAAGACAGCTCTGCAGAGAAGCCCTGAAACACCCCTTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000413464.6 |
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| CDS TCA 90 bp | AGGCAGTGTCAAATCATCTGGCTGCTCCTGAAGCTCATCCTCAAGTaGTGCCAGGTGGGTGAGGTTGGGCAGGCAGTATGGGTGCATGGC | + |
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Preference number: 5 (lower is better) Translates to: RQCQIIWLLLKLILK*CQVGEVGQAVWVHG Trigger: GCCATGCACCCATACTGCCTGCCCAACCTCACCCACCTGGCATCACTTGAGGATGAGCTTCAGGAGCAGCCAGATGATTTGACACTGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000413464.6 |
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| CDS TCA 90 bp | GACTCTAGAGCTGACTACAGCGTCCCTGCAACAGAGGCATCCAGTTaGCAGTCCTGGAGTGTCAGCCGGCTGCTGACTAACAGCTGTAGG | + |
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Preference number: 5 (lower is better) Translates to: DSRADYSVPATEASS*QSWSVSRLLTNSCR Trigger: CCTACAGCTGTTAGTCAGCAGCCGGCTGACACTCCAGGACTGTCAACTGGATGCCTCTGTTGCAGGGACGCTGTAGTCAGCTCTAGAGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000462933.1 |
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| CDS GCA 90 bp | GGAGGAGATGCTCTCATCACCAGCTGCTGGCACTGCCATCTCTGCTaGTGTTGCTTTATCTTCCTCCTCAGGGCAGGCCAAATGCATGGG | + |
|
Preference number: 5 (lower is better) Translates to: GGDALITSCWHCHLC*CCFIFLLRAGQMHG Trigger: CCCATGCATTTGGCCTGCCCTGAGGAGGAAGATAAAGCAACAGCAGCAGAGATGGCAGTGCCAGCAGCTGGTGATGAGAGCATCTCCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000413464.6 |
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| CDS GCA 90 bp | CTCATCTGCCTGCCGCAGCTTGTGGCCACTCTCAATGGCTGCAAATaGCTCCTCAGCATAGCGATAAGTGACGAAGCCGTAGTTGTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: LICLPQLVATLNGCK*LLSIAISDEAVVVP Trigger: GGGGACAACTACGGCTTCGTCACTTATCGCTATGCTGAGGAGGCATTTGCAGCCATTGAGAGTGGCCACAAGCTGCGGCAGGCAGATGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000278070.7 ENST00000370012.1 ENST00000413464.6 ENST00000495914.1 |
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| CDS GCA 90 bp | GGGCTGCTCATCTGCCTGCCGCAGCTTGTGGCCACTCTCAATGGCTaGAAATGCCTCCTCAGCATAGCGATAAGTGACGAAGCCGTAGTT | + |
|
Preference number: 5 (lower is better) Translates to: GLLICLPQLVATLNG*KCLLSIAISDEAVV Trigger: AACTACGGCTTCGTCACTTATCGCTATGCTGAGGAGGCATTTGCAGCCATTGAGAGTGGCCACAAGCTGCGGCAGGCAGATGAGCAGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000278070.7 ENST00000370012.1 ENST00000413464.6 ENST00000495914.1 |
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| CDS CCA 90 bp | CTGCTGCTGTTGCTTTATCTTCCTCCTCAGGGCAGGCCAAATGCATaGGGAAGTCCGGGATACTGCTCACACAGTTGTCAAGCTCCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: LLLLLYLPPQGRPNA*GSPGYCSHSCQAPR Trigger: CCGGGGAGCTTGACAACTGTGTGAGCAGTATCCCGGACTTCCCCATGCATTTGGCCTGCCCTGAGGAGGAAGATAAAGCAACAGCAGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000413464.6 |
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| CDS CCA 90 bp | CAGGGCCAACTGCAGTGGGATCAGCTTCAACAGAGTCAACTGGCATaGGGCTGGCTTGGGCAGAGTCGACCAATGAGAGATGGGTTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: QGQLQWDQLQQSQLA*GWLGQSRPMRDGLV Trigger: TACCAACCCATCTCTCATTGGTCGACTCTGCCCAAGCCAGCCCCATGCCAGTTGACTCTGTTGAAGCTGATCCCACTGCAGTTGGCCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000413464.6 |
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| CDS CCA 90 bp | CACTTCCCAGTTGGGGGCTGTGGACTTCTCTCTTCTGTTTCTGCTTaGCGTTGCTGCCTTCGTCGCCGGTACTCAGATAAGCTGAGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: HFPVGGCGLLSSVSA*RCCLRRRYSDKLRG Trigger: GCCTCTCAGCTTATCTGAGTACCGGCGACGAAGGCAGCAACGCCAAGCAGAAACAGAAGAGAGAAGTCCACAGCCCCCAACTGGGAAGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000413464.6 |
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| CDS CCA 90 bp | TTCATCTGGGGACTTTGCACCAGGGCAGACACCTTGTGTTTCGGATaGGGAGATGCAGGCACTGGCTTGACCTCCACCTTGGTAGGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: FIWGLCTRADTLCFG*GDAGTGLTSTLVGS Trigger: AGAGCCTACCAAGGTGGAGGTCAAGCCAGTGCCTGCATCTCCCCATCCGAAACACAAGGTGTCTGCCCTGGTGCAAAGTCCCCAGATGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000278070.7 ENST00000370012.1 ENST00000413464.6 |
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| CDS CCA 90 bp | GGATGTTTGGCCTCCGTAACTCCTTCAGGCTTCAGGGTTCCCTCCTaGGCGGTGGACTTAGGAGATTTGGCTTTGGCCAGCAGTGAGACA | + |
|
Preference number: 5 (lower is better) Translates to: GCLASVTPSGFRVPS*AVDLGDLALASSET Trigger: TGTCTCACTGCTGGCCAAAGCCAAATCTCCTAAGTCCACCGCCCAGGAGGGAACCCTGAAGCCTGAAGGAGTTACGGAGGCCAAACATCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000370012.1 |
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| CDS GCA 90 bp | ACACCTTCAGCAGACACACATGCTAGAGCCTTCATCTGGGGACTTTaGACCAGGGCAGACACCTTGTGTTTCGGATGGGGAGATGCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: TPSADTHARAFIWGL*TRADTLCFGWGDAG Trigger: GCCTGCATCTCCCCATCCGAAACACAAGGTGTCTGCCCTGGTGCAAAGTCCCCAGATGAAGGCTCTAGCATGTGTGTCTGCTGAAGGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000278070.7 ENST00000370012.1 ENST00000413464.6 |
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| CDS GCA 90 bp | CATAAGACAATTCAAGACTCAACTCTTAGGCACCTGCATCCCAGGTaGATGGCGCTCCCTGAACACATGCTCACCGCCGCCTCCTGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: HKTIQDSTLRHLHPR*MALPEHMLTAASCH Trigger: GTGACAGGAGGCGGCGGTGAGCATGTGTTCAGGGAGCGCCATGCACCTGGGATGCAGGTGCCTAAGAGTTGAGTCTTGAATTGTCTTATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000495914.1 |
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| CDS CCA 90 bp | AGACAATTCAAGACTCAACTCTTAGGCACCTGCATCCCAGGTGCATaGCGCTCCCTGAACACATGCTCACCGCCGCCTCCTGTCACTTCT | + |
|
Preference number: 5 (lower is better) Translates to: RQFKTQLLGTCIPGA*RSLNTCSPPPPVTS Trigger: AGAAGTGACAGGAGGCGGCGGTGAGCATGTGTTCAGGGAGCGCCATGCACCTGGGATGCAGGTGCCTAAGAGTTGAGTCTTGAATTGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000495914.1 |
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| CDS TCA 90 bp | CCACCTCCTTCACATCGAGTCTCACCTGCCCAGCTCACACCAACCTaGAATCAATGTGGAGGGGAACATGCTTGGCAGAACAGGATGGAG | + |
|
Preference number: 5 (lower is better) Translates to: PPPSHRVSPAQLTPT*NQCGGEHAWQNRME Trigger: CTCCATCCTGTTCTGCCAAGCATGTTCCCCTCCACATTGATTTCAGGTTGGTGTGAGCTGGGCAGGTGAGACTCGATGTGAAGGAGGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000462933.1 |
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| CDS GCA 90 bp | CCTACAGGCACAAGGCAAATCTCAAGGGGTGTTTCAGGGCTTCTCTaGAGAGCTGTCTTCTTGGCTGGGGCTGGTGGGATGACAAGACAA | + |
|
Preference number: 5 (lower is better) Translates to: PTGTRQISRGVSGLL*RAVFLAGAGGMTRQ Trigger: TTGTCTTGTCATCCCACCAGCCCCAGCCAAGAAGACAGCTCTGCAGAGAAGCCCTGAAACACCCCTTGAGATTTGCCTTGTGCCTGTAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000413464.6 |
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| CDS TCA 90 bp | TTTCTCAGAGCAGAGGGTTACCTTGGGCACAGCAGCCTCTGTCTCTaGCTCCAGTGTAGGCATAAGCAGCTGCAAGGCAGAACTAGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: FLRAEGYLGHSSLCL*LQCRHKQLQGRTSL Trigger: GAGACTAGTTCTGCCTTGCAGCTGCTTATGCCTACACTGGAGTCAGAGACAGAGGCTGCTGTGCCCAAGGTAACCCTCTGCTCTGAGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000413464.6 |
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| CDS GCA 90 bp | ATCTCTGCTGCTGTTGCTTTATCTTCCTCCTCAGGGCAGGCCAAATaGATGGGGAAGTCCGGGATACTGCTCACACAGTTGTCAAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: ISAAVALSSSSGQAK*MGKSGILLTQLSSS Trigger: GGAGCTTGACAACTGTGTGAGCAGTATCCCGGACTTCCCCATGCATTTGGCCTGCCCTGAGGAGGAAGATAAAGCAACAGCAGCAGAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000413464.6 |
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| CDS CCA 90 bp | GCAGTGGGATCAGCTTCAACAGAGTCAACTGGCATGGGGCTGGCTTaGGCAGAGTCGACCAATGAGAGATGGGTTGGTATAGGATTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: AVGSASTESTGMGLA*AESTNERWVGIGLV Trigger: AACCAATCCTATACCAACCCATCTCTCATTGGTCGACTCTGCCCAAGCCAGCCCCATGCCAGTTGACTCTGTTGAAGCTGATCCCACTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000413464.6 |
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| CDS CCA 90 bp | TCAACAGTCACACCTTCAGCAGACACACATGCTAGAGCCTTCATCTaGGGACTTTGCACCAGGGCAGACACCTTGTGTTTCGGATGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: STVTPSADTHARAFI*GLCTRADTLCFGWG Trigger: TCCCCATCCGAAACACAAGGTGTCTGCCCTGGTGCAAAGTCCCCAGATGAAGGCTCTAGCATGTGTGTCTGCTGAAGGTGTGACTGTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000278070.7 ENST00000370012.1 ENST00000413464.6 |
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| CDS GCA 90 bp | GAGAGGAGCCCTCCCGGGGTGACACAAGCAGCTCCGAATCAGGAATaGTGTCAAATGGAGAAAGGTTCTCAGAATCTGCATTGTCCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: ERSPPGVTQAAPNQE*CQMEKGSQNLHCPR Trigger: TCTTGGACAATGCAGATTCTGAGAACCTTTCTCCATTTGACAGCATTCCTGATTCGGAGCTGCTTGTGTCACCCCGGGAGGGCTCCTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000413464.6 |
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| CDS TCA 90 bp | ATTCCAATCTCACTGATGAAAGCCTGTACCACATCTTCAGAACCCTaGGTACGTGGGGTAGGCAGGAAGGACAGCTTCCTTAGACGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: IPISLMKACTTSSEP*VRGVGRKDSFLRRA Trigger: AGCCCGTCTAAGGAAGCTGTCCTTCCTGCCTACCCCACGTACTCAGGGTTCTGAAGATGTGGTACAGGCTTTCATCAGTGAGATTGGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000278070.7 ENST00000370012.1 ENST00000413464.6 ENST00000489648.5 |
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| CDS CCA 90 bp | CGTCGCCGGTACTCAGATAAGCTGAGAGGCCGAGGTCTGGCTTCATaGGTTGTAGCACTGGTACCACTTTCAATTTTCAGAGAATCCACA | + |
|
Preference number: 5 (lower is better) Translates to: RRRYSDKLRGRGLAS*VVALVPLSIFREST Trigger: TGTGGATTCTCTGAAAATTGAAAGTGGTACCAGTGCTACAACCCATGAAGCCAGACCTCGGCCTCTCAGCTTATCTGAGTACCGGCGACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000413464.6 |
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| CDS CCA 90 bp | GACACTCCTTTTTGGCTTCTGATTTCTCAAACTGCTCCAGCAGACTaGACAGGTCCGATGCCTCAATTCCTGTGGAGGCACACAACACAG | + |
|
Preference number: 5 (lower is better) Translates to: DTPFWLLISQTAPAD*TGPMPQFLWRHTTQ Trigger: CTGTGTTGTGTGCCTCCACAGGAATTGAGGCATCGGACCTGTCCAGTCTGCTGGAGCAGTTTGAGAAATCAGAAGCCAAAAAGGAGTGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000462933.1 |
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| CDS TCA 90 bp | GCACTCCTCAATCTCTCCAAAAACGGAGAACCTCTGTTTCAGCTCTaGTCGAGTCATGCGGCCAGGTATCTTTCCAATGAAGACCACCCT | + |
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Preference number: 5 (lower is better) Translates to: ALLNLSKNGEPLFQL*SSHAARYLSNEDHP Trigger: AGGGTGGTCTTCATTGGAAAGATACCTGGCCGCATGACTCGATCAGAGCTGAAACAGAGGTTCTCCGTTTTTGGAGAGATTGAGGAGTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000278070.7 ENST00000370012.1 ENST00000413464.6 ENST00000489648.5 ENST00000495914.1 |
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| CDS GCA 90 bp | CTCCGAATCAGGAATGCTGTCAAATGGAGAAAGGTTCTCAGAATCTaGATTGTCCAAGATCTCCGTCAGAGCCGTGAGCAGCGACACTTC | + |
|
Preference number: 5 (lower is better) Translates to: LRIRNAVKWRKVLRI*IVQDLRQSREQRHF Trigger: GAAGTGTCGCTGCTCACGGCTCTGACGGAGATCTTGGACAATGCAGATTCTGAGAACCTTTCTCCATTTGACAGCATTCCTGATTCGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000413464.6 |
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| CDS TCA 90 bp | CCAAAGGAGAAAAAGGATAGCAGGGAAGGGCCCAAGGTTACCTCCTaGGGTTCTTCTGGGCCTGTTTCAACAATGTGTCAAAGTCAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: PKEKKDSREGPKVTS*GSSGPVSTMCQSQE Trigger: CTCTTGACTTTGACACATTGTTGAAACAGGCCCAGAAGAACCTCAGGAGGTAACCTTGGGCCCTTCCCTGCTATCCTTTTTCTCCTTTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000278070.7 ENST00000370012.1 ENST00000413464.6 |
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| CDS CCA 90 bp | CAATGTGTCAAAGTCAAGAGAATCAAATTTGCTCTTTACAGGTGCTaGGTCAAAGTCTTCCCGGTTGGAGTCAAGATCAGAATAGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: QCVKVKRIKFALYRC*VKVFPVGVKIRIAP Trigger: AGGAGCTATTCTGATCTTGACTCCAACCGGGAAGACTTTGACCCAGCACCTGTAAAGAGCAAATTTGATTCTCTTGACTTTGACACATTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000278070.7 ENST00000370012.1 ENST00000413464.6 |
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| CDS GCA 90 bp | CAACAATGTGTCAAAGTCAAGAGAATCAAATTTGCTCTTTACAGGTaGTGGGTCAAAGTCTTCCCGGTTGGAGTCAAGATCAGAATAGCT | + |
|
Preference number: 5 (lower is better) Translates to: QQCVKVKRIKFALYR*WVKVFPVGVKIRIA Trigger: AGCTATTCTGATCTTGACTCCAACCGGGAAGACTTTGACCCAGCACCTGTAAAGAGCAAATTTGATTCTCTTGACTTTGACACATTGTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000278070.7 ENST00000370012.1 ENST00000413464.6 |
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| CDS TCA 72 bp | GTCTCTCCGTCCCCGGCGCGCCGCCATCTTGGCCCCTaGACACCCAGCGCTGCTCTGATCGCTGGCGCCGCC | + |
|
Preference number: 6 (lower is better) Translates to: VSPSPARRHLGP*TPSAALIAGAA Trigger: GGCGGCGCCAGCGATCAGAGCAGCGCTGGGTGTTCAGGGGCCAAGATGGCGGCGCGCCGGGGACGGAGAGAC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000413464.6 |
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| CDS GCA 72 bp | GGCGCGCCGCCATCTTGGCCCCTGAACACCCAGCGCTaGTCTGATCGCTGGCGCCGCCTCGCCCAGCCGATT | + |
|
Preference number: 6 (lower is better) Translates to: GAPPSWPLNTQR*SDRWRRLAQPI Trigger: AATCGGCTGGGCGAGGCGGCGCCAGCGATCAGAGCAGCGCTGGGTGTTCAGGGGCCAAGATGGCGGCGCGCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000413464.6 |
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| CDS CAA 90 bp | CACCTGCTCGCCGCCGCTCACAGCGCCCAAAGTCCCATACGGCGCTaGGCTTCGACTTCCCCAACCACTGCCGCGGGCTCCCCCGCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: HLLAAAHSAQSPIRR*ASTSPTTAAGSPAR Trigger: CCTGGCGGGGGAGCCCGCGGCAGTGGTTGGGGAAGTCGAAGCCAAGCGCCGTATGGGACTTTGGGCGCTGTGAGCGGCGGCGAGCAGGTG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000413464.6 |
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| CDS TCA 72 bp | GCCGCCATCTTGGCCCCTGAACACCCAGCGCTGCTCTaGTCGCTGGCGCCGCCTCGCCCAGCCGATTGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: AAILAPEHPALL*SLAPPRPADCG Trigger: CCCACAATCGGCTGGGCGAGGCGGCGCCAGCGATCAGAGCAGCGCTGGGTGTTCAGGGGCCAAGATGGCGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000413464.6 |
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| CDS GCA 72 bp | GAGCTGACAGAACGGCTGTTGCGGCCTCGGCGGCCCTaGCAGCCCTGGCTTGAGGGGCTGGCTGACCTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: ELTERLLRPRRP*QPWLEGLADLQ Trigger: CTGCAGGTCAGCCAGCCCCTCAAGCCAGGGCTGGCAGGGCCGCCGAGGCCGCAACAGCCGTTCTGTCAGCTC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000370012.1 |
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| CDS CCA 72 bp | CGACTCCGTCTCTCCGTCCCCGGCGCGCCGCCATCTTaGCCCCTGAACACCCAGCGCTGCTCTGATCGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: RLRLSVPGAPPS*PLNTQRCSDRW Trigger: CCAGCGATCAGAGCAGCGCTGGGTGTTCAGGGGCCAAGATGGCGGCGCGCCGGGGACGGAGAGACGGAGTCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000413464.6 |
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| CDS CCA 72 bp | CCGCCGCTCACAGCGCCCAAAGTCCCATACGGCGCTTaGCTTCGACTTCCCCAACCACTGCCGCGGGCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: PPLTAPKVPYGA*LRLPQPLPRAP Trigger: GGGAGCCCGCGGCAGTGGTTGGGGAAGTCGAAGCCAAGCGCCGTATGGGACTTTGGGCGCTGTGAGCGGCGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000413464.6 |
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| CDS CAA 72 bp | GCCGCCGCTCACAGCGCCCAAAGTCCCATACGGCGCTaGGCTTCGACTTCCCCAACCACTGCCGCGGGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: AAAHSAQSPIRR*ASTSPTTAAGS Trigger: GGAGCCCGCGGCAGTGGTTGGGGAAGTCGAAGCCAAGCGCCGTATGGGACTTTGGGCGCTGTGAGCGGCGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000413464.6 |
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| CDS GCA 72 bp | GGCCCTGCCAGCCCTGGCTTGAGGGGCTGGCTGACCTaGAGGCTTTTCGGTAACAGCGCATTGACCGCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: GPASPGLRGWLT*RLFGNSALTAA Trigger: AGCAGCGGTCAATGCGCTGTTACCGAAAAGCCTGCAGGTCAGCCAGCCCCTCAAGCCAGGGCTGGCAGGGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000370012.1 |
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| CDS CCA 72 bp | AGGCCGGGGTCCAGGAGAGACCTGTCGCACCACAACTaGGATCTCCAGGTCATCGCCAGCTGTGGCTGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: RPGSRRDLSHHN*DLQVIASCGCL Trigger: CAGGCAGCCACAGCTGGCGATGACCTGGAGATCCCAGTTGTGGTGCGACAGGTCTCTCCTGGACCCCGGCCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000413464.6 |
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| CDS CCA 72 bp | TCTTGGCCCCTGAACACCCAGCGCTGCTCTGATCGCTaGCGCCGCCTCGCCCAGCCGATTGTGGGAAAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: SWPLNTQRCSDR*RRLAQPIVGKE Trigger: TTCCTTTCCCACAATCGGCTGGGCGAGGCGGCGCCAGCGATCAGAGCAGCGCTGGGTGTTCAGGGGCCAAGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000413464.6 |
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| CDS GCA 72 bp | ACTGGGATCTCCAGGTCATCGCCAGCTGTGGCTGCCTaGCCCACAATCTCCAGCACTACGCAGCCCTCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: TGISRSSPAVAA*PTISSTTQPSG Trigger: GCCTGAGGGCTGCGTAGTGCTGGAGATTGTGGGGCAGGCAGCCACAGCTGGCGATGACCTGGAGATCCCAGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000413464.6 |
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| CDS GCA 72 bp | CACAACTGGGATCTCCAGGTCATCGCCAGCTGTGGCTaGCTGCCCCACAATCTCCAGCACTACGCAGCCCTC | + |
|
Preference number: 6 (lower is better) Translates to: HNWDLQVIASCG*LPHNLQHYAAL Trigger: GAGGGCTGCGTAGTGCTGGAGATTGTGGGGCAGGCAGCCACAGCTGGCGATGACCTGGAGATCCCAGTTGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000413464.6 |
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| CDS GCA 72 bp | CTCCAAGTTCTTAGGGCTAGAATTCTCCAAGGCAGCTaGCCAGGCCCGAGCCCAAGCCCGGGGCTTCCCCTT | + |
|
Preference number: 6 (lower is better) Translates to: LQVLRARILQGS*PGPSPSPGLPL Trigger: AAGGGGAAGCCCCGGGCTTGGGCTCGGGCCTGGGCAGCTGCCTTGGAGAATTCTAGCCCTAAGAACTTGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000413464.6 |
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| CDS CAA 72 bp | GGCTGGCTGACCTGCAGGCTTTTCGGTAACAGCGCATaGACCGCTGCTTGGCTGAGGGTTCAGGGGGAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: GWLTCRLFGNSA*TAAWLRVQGES Trigger: GGACTCCCCCTGAACCCTCAGCCAAGCAGCGGTCAATGCGCTGTTACCGAAAAGCCTGCAGGTCAGCCAGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000370012.1 |
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| CDS CAA 90 bp | CTAGGGCCATGGACCCCTTCTTGGAGGCGAACTGCAGCTGGATGTTaGGCCTCCGTAACTCCTTCAGGCTTCAGGGTTCCCTCCTGGGCG | + |
|
Preference number: 6 (lower is better) Translates to: LGPWTPSWRRTAAGC*ASVTPSGFRVPSWA Trigger: CGCCCAGGAGGGAACCCTGAAGCCTGAAGGAGTTACGGAGGCCAAACATCCAGCTGCAGTTCGCCTCCAAGAAGGGGTCCATGGCCCTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000370012.1 |
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| CDS CAA 90 bp | GAGGAAGACGATGATGAGGATGAGGAAGATGCTTCGCTAGTCCGGTaGGACCCAGAGCTGACAGAACGGCTGTTGCGGCCTCGGCGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: EEDDDEDEEDASLVR*DPELTERLLRPRRP Trigger: GGGCCGCCGAGGCCGCAACAGCCGTTCTGTCAGCTCTGGGTCCAACCGGACTAGCGAAGCATCTTCCTCATCCTCATCATCGTCTTCCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000370012.1 |
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| CDS TCA 72 bp | GCTCCTGAAGCTCATCCTCAAGTGATGCCAGGTGGGTaGGGTTGGGCAGGCAGTATGGGTGCATGGCCCGCA | + |
|
Preference number: 6 (lower is better) Translates to: APEAHPQVMPGG*GWAGSMGAWPA Trigger: TGCGGGCCATGCACCCATACTGCCTGCCCAACCTCACCCACCTGGCATCACTTGAGGATGAGCTTCAGGAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000413464.6 |
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| CDS TCA 72 bp | GGCACTGGCTTGACCTCCACCTTGGTAGGCTCTGTCTaGGGAGCTCCATGGCCAGGTAGCCCAAGACTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: GTGLTSTLVGSV*GAPWPGSPRLR Trigger: CCTCAGTCTTGGGCTACCTGGCCATGGAGCTCCTCAGACAGAGCCTACCAAGGTGGAGGTCAAGCCAGTGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000278070.7 ENST00000370012.1 ENST00000413464.6 |
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| CDS GCA 72 bp | CTTCCTGCCCTTTCGAGCTCTCTGGGAACCTGGTGCTaGATTGGCAGGTGGGTTCTGAGGCTCCTTGGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: LPALSSSLGTWC*IGRWVLRLLGH Trigger: GTGCCCAAGGAGCCTCAGAACCCACCTGCCAATGCAGCACCAGGTTCCCAGAGAGCTCGAAAGGGCAGGAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000413464.6 |
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| CDS GCA 72 bp | TCGGCCCCCAAAGCAGAGATCAAAGGGCTGCTCATCTaGCTGCCGCAGCTTGTGGCCACTCTCAATGGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SAPKAEIKGLLI*LPQLVATLNGC Trigger: GCAGCCATTGAGAGTGGCCACAAGCTGCGGCAGGCAGATGAGCAGCCCTTTGATCTCTGCTTTGGGGGCCGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000278070.7 ENST00000370012.1 ENST00000413464.6 ENST00000495914.1 |
||
| CDS CCA 72 bp | TCTACTGCTGCCTGTACTGGGCCCCAGTGGGTCAACTaGGGTGATGAGGTCACGTTCTGGGGGTGTCCGAGA | + |
|
Preference number: 6 (lower is better) Translates to: STAACTGPQWVN*GDEVTFWGCPR Trigger: TCTCGGACACCCCCAGAACGTGACCTCATCACCCCAGTTGACCCACTGGGGCCCAGTACAGGCAGCAGTAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000413464.6 |
||
| CDS CCA 72 bp | ACAGGAGGGGAAGGTCTCGCCAACAGTGGCATCTCCTaGGATGGCACCTGCTCAGTGGGAGATGAGGCCACA | + |
|
Preference number: 6 (lower is better) Translates to: TGGEGLANSGIS*DGTCSVGDEAT Trigger: TGTGGCCTCATCTCCCACTGAGCAGGTGCCATCCCAGGAGATGCCACTGTTGGCGAGACCTTCCCCTCCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000413464.6 |
||
| CDS CCA 72 bp | CACAGACTGCACAGGAGGGGAAGGTCTCGCCAACAGTaGCATCTCCTGGGATGGCACCTGCTCAGTGGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: HRLHRRGRSRQQ*HLLGWHLLSGR Trigger: TCTCCCACTGAGCAGGTGCCATCCCAGGAGATGCCACTGTTGGCGAGACCTTCCCCTCCTGTGCAGTCTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000413464.6 |
||
| CDS CCA 72 bp | TGGAGGCAAAGGAGGTGGGGGAACAGTAGACCAGAATaGAGCATGTTGAGGCCCTGGGCCCCATCCCAAGGG | + |
|
Preference number: 6 (lower is better) Translates to: WRQRRWGNSRPE*SMLRPWAPSQG Trigger: CCCTTGGGATGGGGCCCAGGGCCTCAACATGCTCCATTCTGGTCTACTGTTCCCCCACCTCCTTTGCCTCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000413464.6 |
||
| CDS CAA 72 bp | TTCAGGGTTCCCTCCTGGGCGGTGGACTTAGGAGATTaGGCTTTGGCCAGCAGTGAGACAGCAGCCAGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: FRVPSWAVDLGD*ALASSETAARG Trigger: GCCCCTGGCTGCTGTCTCACTGCTGGCCAAAGCCAAATCTCCTAAGTCCACCGCCCAGGAGGGAACCCTGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000370012.1 |
||
| CDS CAA 72 bp | GCCCACATGGACTCGACTAGGGCCATGGACCCCTTCTaGGAGGCGAACTGCAGCTGGATGTTTGGCCTCCGT | + |
|
Preference number: 6 (lower is better) Translates to: AHMDSTRAMDPF*EANCSWMFGLR Trigger: ACGGAGGCCAAACATCCAGCTGCAGTTCGCCTCCAAGAAGGGGTCCATGGCCCTAGTCGAGTCCATGTGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000370012.1 |
||
| CDS CAA 90 bp | GGGCAGGCCAAATGCATGGGGAAGTCCGGGATACTGCTCACACAGTaGTCAAGCTCCCCGGCAAGAATCTGGCCACTGAAGCTGGCCACC | + |
|
Preference number: 6 (lower is better) Translates to: GQAKCMGKSGILLTQ*SSSPARIWPLKLAT Trigger: GGTGGCCAGCTTCAGTGGCCAGATTCTTGCCGGGGAGCTTGACAACTGTGTGAGCAGTATCCCGGACTTCCCCATGCATTTGGCCTGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000413464.6 |
||
| CDS CAA 90 bp | GGAACCACTGCAGGGTCAACTGCTGCTGAGTCAGCCAGGACTGGGTaGATCAGCACTGGCTCAGCCGGGAGAGGCTCAACCAGTTCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: GTTAGSTAAESARTG*ISTGSAGRGSTSSE Trigger: CTCAGAACTGGTTGAGCCTCTCCCGGCTGAGCCAGTGCTGATCAACCCAGTCCTGGCTGACTCAGCAGCAGTTGACCCTGCAGTGGTTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000413464.6 |
||
| CDS GCA 72 bp | CTTCTTCCTGCCCTTTCGAGCTCTCTGGGAACCTGGTaGTGCATTGGCAGGTGGGTTCTGAGGCTCCTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: LLPALSSSLGTW*CIGRWVLRLLG Trigger: CCCAAGGAGCCTCAGAACCCACCTGCCAATGCAGCACCAGGTTCCCAGAGAGCTCGAAAGGGCAGGAAGAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000413464.6 |
||
| CDS CCA 72 bp | TCTGGGGCTTGTAACCGGTCTAGGGGCCTCTTCTCCTaGGGAATGTCAACGCCGCCTGAGTTTCCTACAGCC | + |
|
Preference number: 6 (lower is better) Translates to: SGACNRSRGLFS*GMSTPPEFPTA Trigger: GGCTGTAGGAAACTCAGGCGGCGTTGACATTCCCCAGGAGAAGAGGCCCCTAGACCGGTTACAAGCCCCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000370012.1 |
||
| CDS CCA 72 bp | GCCTCCGTAACTCCTTCAGGCTTCAGGGTTCCCTCCTaGGCGGTGGACTTAGGAGATTTGGCTTTGGCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: ASVTPSGFRVPS*AVDLGDLALAS Trigger: GCTGGCCAAAGCCAAATCTCCTAAGTCCACCGCCCAGGAGGGAACCCTGAAGCCTGAAGGAGTTACGGAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000370012.1 |
||
| CDS CCA 72 bp | CCCACATGGACTCGACTAGGGCCATGGACCCCTTCTTaGAGGCGAACTGCAGCTGGATGTTTGGCCTCCGTA | + |
|
Preference number: 6 (lower is better) Translates to: PTWTRLGPWTPS*RRTAAGCLASV Trigger: TACGGAGGCCAAACATCCAGCTGCAGTTCGCCTCCAAGAAGGGGTCCATGGCCCTAGTCGAGTCCATGTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000370012.1 |
||
| CDS CAA 90 bp | TCAGCACTGGCTCAGCCGGGAGAGGCTCAACCAGTTCTGAGCTGGTaGAAGCAAGGTCAACCAACCCAGGGTCAACAGGTACAGGGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: SALAQPGEAQPVLSW*KQGQPTQGQQVQGQ Trigger: CTGGCCCTGTACCTGTTGACCCTGGGTTGGTTGACCTTGCTTCAACCAGCTCAGAACTGGTTGAGCCTCTCCCGGCTGAGCCAGTGCTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000413464.6 |
||
| CDS CAA 90 bp | ATCTCCTGGGATGGCACCTGCTCAGTGGGAGATGAGGCCACAGGTTaGCTTACAGGTGGCTCAGGACTAGGAGAAGCAGGGCTGGGACCT | + |
|
Preference number: 6 (lower is better) Translates to: ISWDGTCSVGDEATG*LTGGSGLGEAGLGP Trigger: AGGTCCCAGCCCTGCTTCTCCTAGTCCTGAGCCACCTGTAAGCAAACCTGTGGCCTCATCTCCCACTGAGCAGGTGCCATCCCAGGAGAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000413464.6 |
||
| CDS CAA 90 bp | TGGAGGCAAAGGAGGTGGGGGAACAGTAGACCAGAATGGAGCATGTaGAGGCCCTGGGCCCCATCCCAAGGGCCCATAGGTACATGTGGA | + |
|
Preference number: 6 (lower is better) Translates to: WRQRRWGNSRPEWSM*RPWAPSQGPIGTCG Trigger: TCCACATGTACCTATGGGCCCTTGGGATGGGGCCCAGGGCCTCAACATGCTCCATTCTGGTCTACTGTTCCCCCACCTCCTTTGCCTCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000413464.6 |
||
| CDS CAA 90 bp | CCTTCAGGCTTCAGGGTTCCCTCCTGGGCGGTGGACTTAGGAGATTaGGCTTTGGCCAGCAGTGAGACAGCAGCCAGGGGCTTCCATAAC | + |
|
Preference number: 6 (lower is better) Translates to: PSGFRVPSWAVDLGD*ALASSETAARGFHN Trigger: GTTATGGAAGCCCCTGGCTGCTGTCTCACTGCTGGCCAAAGCCAAATCTCCTAAGTCCACCGCCCAGGAGGGAACCCTGAAGCCTGAAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000370012.1 |
||
| CDS CAA 90 bp | CATGCTAGAGCCTTCATCTGGGGACTTTGCACCAGGGCAGACACCTaGTGTTTCGGATGGGGAGATGCAGGCACTGGCTTGACCTCCACC | + |
|
Preference number: 6 (lower is better) Translates to: HARAFIWGLCTRADT*CFGWGDAGTGLTST Trigger: GGTGGAGGTCAAGCCAGTGCCTGCATCTCCCCATCCGAAACACAAGGTGTCTGCCCTGGTGCAAAGTCCCCAGATGAAGGCTCTAGCATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000278070.7 ENST00000370012.1 ENST00000413464.6 |
||
| CDS TCA 72 bp | TGGCATCTCCTGGGATGGCACCTGCTCAGTGGGAGATaGGGCCACAGGTTTGCTTACAGGTGGCTCAGGACT | + |
|
Preference number: 6 (lower is better) Translates to: WHLLGWHLLSGR*GHRFAYRWLRT Trigger: AGTCCTGAGCCACCTGTAAGCAAACCTGTGGCCTCATCTCCCACTGAGCAGGTGCCATCCCAGGAGATGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000413464.6 |
||
| CDS TCA 72 bp | GCTGACTACAGCGTCCCTGCAACAGAGGCATCCAGTTaGCAGTCCTGGAGTGTCAGCCGGCTGCTGACTAAC | + |
|
Preference number: 6 (lower is better) Translates to: ADYSVPATEASS*QSWSVSRLLTN Trigger: GTTAGTCAGCAGCCGGCTGACACTCCAGGACTGTCAACTGGATGCCTCTGTTGCAGGGACGCTGTAGTCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000462933.1 |
||
| CDS GCA 72 bp | CCCAGTTGGGGGCTGTGGACTTCTCTCTTCTGTTTCTaGTTGGCGTTGCTGCCTTCGTCGCCGGTACTCAGA | + |
|
Preference number: 6 (lower is better) Translates to: PSWGLWTSLFCF*LALLPSSPVLR Trigger: TCTGAGTACCGGCGACGAAGGCAGCAACGCCAAGCAGAAACAGAAGAGAGAAGTCCACAGCCCCCAACTGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000413464.6 |
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| CDS GCA 72 bp | GGTCTCGCCAACAGTGGCATCTCCTGGGATGGCACCTaGTCAGTGGGAGATGAGGCCACAGGTTTGCTTACA | + |
|
Preference number: 6 (lower is better) Translates to: GLANSGISWDGT*SVGDEATGLLT Trigger: TGTAAGCAAACCTGTGGCCTCATCTCCCACTGAGCAGGTGCCATCCCAGGAGATGCCACTGTTGGCGAGACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000413464.6 |
||
| CDS GCA 72 bp | TCGACTAGGGCCATGGACCCCTTCTTGGAGGCGAACTaGAGCTGGATGTTTGGCCTCCGTAACTCCTTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: STRAMDPFLEAN*SWMFGLRNSFR Trigger: CCTGAAGGAGTTACGGAGGCCAAACATCCAGCTGCAGTTCGCCTCCAAGAAGGGGTCCATGGCCCTAGTCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000370012.1 |
||
| CDS GCA 72 bp | ATTCAAGACTCAACTCTTAGGCACCTGCATCCCAGGTaGATGGCGCTCCCTGAACACATGCTCACCGCCGCC | + |
|
Preference number: 6 (lower is better) Translates to: IQDSTLRHLHPR*MALPEHMLTAA Trigger: GGCGGCGGTGAGCATGTGTTCAGGGAGCGCCATGCACCTGGGATGCAGGTGCCTAAGAGTTGAGTCTTGAAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000495914.1 |
||
| CDS CCA 72 bp | GGGCCAGCTGGAGTGCCCCTAGACTCCATTTTAGGTTaGGGAACAGCTCTCCCAATGGAGGCTGGAGGCAAA | + |
|
Preference number: 6 (lower is better) Translates to: GPAGVPLDSILG*GTALPMEAGGK Trigger: TTTGCCTCCAGCCTCCATTGGGAGAGCTGTTCCCCAACCTAAAATGGAGTCTAGGGGCACTCCAGCTGGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000278070.7 ENST00000370012.1 ENST00000413464.6 |
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| CDS CCA 72 bp | GGACTTTGCACCAGGGCAGACACCTTGTGTTTCGGATaGGGAGATGCAGGCACTGGCTTGACCTCCACCTTG | + |
|
Preference number: 6 (lower is better) Translates to: GLCTRADTLCFG*GDAGTGLTSTL Trigger: CAAGGTGGAGGTCAAGCCAGTGCCTGCATCTCCCCATCCGAAACACAAGGTGTCTGCCCTGGTGCAAAGTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000278070.7 ENST00000370012.1 ENST00000413464.6 |
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| CDS CAA 72 bp | GATGGCACCTGCTCAGTGGGAGATGAGGCCACAGGTTaGCTTACAGGTGGCTCAGGACTAGGAGAAGCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: DGTCSVGDEATG*LTGGSGLGEAG Trigger: CCCTGCTTCTCCTAGTCCTGAGCCACCTGTAAGCAAACCTGTGGCCTCATCTCCCACTGAGCAGGTGCCATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000413464.6 |
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| CDS CAA 72 bp | GCCTTCATCTGGGGACTTTGCACCAGGGCAGACACCTaGTGTTTCGGATGGGGAGATGCAGGCACTGGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: AFIWGLCTRADT*CFGWGDAGTGL Trigger: CAAGCCAGTGCCTGCATCTCCCCATCCGAAACACAAGGTGTCTGCCCTGGTGCAAAGTCCCCAGATGAAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000278070.7 ENST00000370012.1 ENST00000413464.6 |
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| CDS TCA 72 bp | CACTTCTGTACCTACAGTAGACTGCCCGCGAGAAGATaGCCTCAGCCTCCTGGCATAGCCTTCCACACAGGC | + |
|
Preference number: 6 (lower is better) Translates to: HFCTYSRLPARR*PQPPGIAFHTG Trigger: GCCTGTGTGGAAGGCTATGCCAGGAGGCTGAGGTCATCTTCTCGCGGGCAGTCTACTGTAGGTACAGAAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000413464.6 |
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| CDS TCA 72 bp | GGGCCCAAGGACAAGACAGGTTTGATGGTGATGTCCTaGTGGCGCTTGACATTCCATCGGGAGCCCACCTCT | + |
|
Preference number: 6 (lower is better) Translates to: GPKDKTGLMVMS*WRLTFHREPTS Trigger: AGAGGTGGGCTCCCGATGGAATGTCAAGCGCCATCAGGACATCACCATCAAACCTGTCTTGTCCTTGGGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000370012.1 |
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| CDS GCA 72 bp | CAGGGCAGGCCAAATGCATGGGGAAGTCCGGGATACTaGTCACACAGTTGTCAAGCTCCCCGGCAAGAATCT | + |
|
Preference number: 6 (lower is better) Translates to: QGRPNAWGSPGY*SHSCQAPRQES Trigger: AGATTCTTGCCGGGGAGCTTGACAACTGTGTGAGCAGTATCCCGGACTTCCCCATGCATTTGGCCTGCCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000413464.6 |
||
| CDS CAA 72 bp | GCTCAGCCGGGAGAGGCTCAACCAGTTCTGAGCTGGTaGAAGCAAGGTCAACCAACCCAGGGTCAACAGGTA | + |
|
Preference number: 6 (lower is better) Translates to: AQPGEAQPVLSW*KQGQPTQGQQV Trigger: TACCTGTTGACCCTGGGTTGGTTGACCTTGCTTCAACCAGCTCAGAACTGGTTGAGCCTCTCCCGGCTGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000413464.6 |
||
| CDS CAA 72 bp | GATGATGAGGATGAGGAAGATGCTTCGCTAGTCCGGTaGGACCCAGAGCTGACAGAACGGCTGTTGCGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: DDEDEEDASLVR*DPELTERLLRP Trigger: AGGCCGCAACAGCCGTTCTGTCAGCTCTGGGTCCAACCGGACTAGCGAAGCATCTTCCTCATCCTCATCATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000370012.1 |
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| CDS CAA 90 bp | AGCAGTGTCTCATCCTGCAGCATTAGCTCCTCCATTTCCAGGTCCTaGTCCCTCAGAGATGGGCCCAGCCGAGAGAGACTGACAAAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: SSVSSCSISSSISRS*SLRDGPSRERLTKP Trigger: TGGCTTTGTCAGTCTCTCTCGGCTGGGCCCATCTCTGAGGGACAAGGACCTGGAAATGGAGGAGCTAATGCTGCAGGATGAGACACTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000413464.6 |
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| CDS TCA 72 bp | AGTAAGCAGCTTGTGCAGAGAGGAGCCCTCCCGGGGTaGCACAAGCAGCTCCGAATCAGGAATGCTGTCAAA | + |
|
Preference number: 6 (lower is better) Translates to: SKQLVQRGALPG*HKQLRIRNAVK Trigger: TTTGACAGCATTCCTGATTCGGAGCTGCTTGTGTCACCCCGGGAGGGCTCCTCTCTGCACAAGCTGCTTACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000413464.6 |
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| CDS TCA 72 bp | CTGTCTGAGGAGCTCCATGGCCAGGTAGCCCAAGACTaGGGGGAGGAGCCATCGACAAGGGAAGTACATTTT | + |
|
Preference number: 6 (lower is better) Translates to: LSEELHGQVAQD*GEEPSTREVHF Trigger: AAAATGTACTTCCCTTGTCGATGGCTCCTCCCCTCAGTCTTGGGCTACCTGGCCATGGAGCTCCTCAGACAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000278070.7 ENST00000370012.1 ENST00000413464.6 |
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| CDS GCA 72 bp | GCAGACACACATGCTAGAGCCTTCATCTGGGGACTTTaGACCAGGGCAGACACCTTGTGTTTCGGATGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: ADTHARAFIWGL*TRADTLCFGWG Trigger: TCCCCATCCGAAACACAAGGTGTCTGCCCTGGTGCAAAGTCCCCAGATGAAGGCTCTAGCATGTGTGTCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000278070.7 ENST00000370012.1 ENST00000413464.6 |
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| CDS CCA 72 bp | TGGGATCAGCTTCAACAGAGTCAACTGGCATGGGGCTaGCTTGGGCAGAGTCGACCAATGAGAGATGGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: WDQLQQSQLAWG*LGQSRPMRDGL Trigger: CAACCCATCTCTCATTGGTCGACTCTGCCCAAGCCAGCCCCATGCCAGTTGACTCTGTTGAAGCTGATCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000413464.6 |
||
| CDS CCA 72 bp | CTGCAGTGGGATCAGCTTCAACAGAGTCAACTGGCATaGGGCTGGCTTGGGCAGAGTCGACCAATGAGAGAT | + |
|
Preference number: 6 (lower is better) Translates to: LQWDQLQQSQLA*GWLGQSRPMRD Trigger: ATCTCTCATTGGTCGACTCTGCCCAAGCCAGCCCCATGCCAGTTGACTCTGTTGAAGCTGATCCCACTGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000413464.6 |
||
| CDS CAA 90 bp | AGATGCTCTCATCACCAGCTGCTGGCACTGCCATCTCTGCTGCTGTaGCTTTATCTTCCTCCTCAGGGCAGGCCAAATGCATGGGGAAGT | + |
|
Preference number: 6 (lower is better) Translates to: RCSHHQLLALPSLLL*LYLPPQGRPNAWGS Trigger: ACTTCCCCATGCATTTGGCCTGCCCTGAGGAGGAAGATAAAGCAACAGCAGCAGAGATGGCAGTGCCAGCAGCTGGTGATGAGAGCATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000413464.6 |
||
| CDS GCA 72 bp | GCCTCTGTCTCTGACTCCAGTGTAGGCATAAGCAGCTaGAAGGCAGAACTAGTCTCTAGCGAGTCATCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: ASVSDSSVGISS*KAELVSSESSR Trigger: CCTGGATGACTCGCTAGAGACTAGTTCTGCCTTGCAGCTGCTTATGCCTACACTGGAGTCAGAGACAGAGGC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000413464.6 |
||
| CDS GCA 72 bp | TGTGGACTTCTCTCTTCTGTTTCTGCTTGGCGTTGCTaGCTTCGTCGCCGGTACTCAGATAAGCTGAGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: CGLLSSVSAWRC*LRRRYSDKLRG Trigger: GCCTCTCAGCTTATCTGAGTACCGGCGACGAAGGCAGCAACGCCAAGCAGAAACAGAAGAGAGAAGTCCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000413464.6 |
||
| CDS GCA 72 bp | GGCTGTGGACTTCTCTCTTCTGTTTCTGCTTGGCGTTaGTGCCTTCGTCGCCGGTACTCAGATAAGCTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: GCGLLSSVSAWR*CLRRRYSDKLR Trigger: TCTCAGCTTATCTGAGTACCGGCGACGAAGGCAGCAACGCCAAGCAGAAACAGAAGAGAGAAGTCCACAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000413464.6 |
||
| CDS CCA 72 bp | ACGGGACAGCATCAACTGGTGGCAAGTTATCTGAGATaGGAACCACTGCAGGGTCAACTGCTGCTGAGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: TGQHQLVASYLR*EPLQGQLLLSQ Trigger: CTGACTCAGCAGCAGTTGACCCTGCAGTGGTTCCCATCTCAGATAACTTGCCACCAGTTGATGCTGTCCCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000413464.6 |
||
| CDS CCA 72 bp | CGAAGCCGTAGTTGTCCCCTTGGACACGGAAGTGGATaGTGCACTCCTCAATCTCTCCAAAAACGGAGAACC | + |
|
Preference number: 6 (lower is better) Translates to: RSRSCPLGHGSG*CTPQSLQKRRT Trigger: GGTTCTCCGTTTTTGGAGAGATTGAGGAGTGCACCATCCACTTCCGTGTCCAAGGGGACAACTACGGCTTCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000278070.7 ENST00000370012.1 ENST00000413464.6 ENST00000489648.5 ENST00000495914.1 |
||
| CDS CCA 72 bp | CTCACCTGCCCAGCTCACACCAACCTGAAATCAATGTaGAGGGGAACATGCTTGGCAGAACAGGATGGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: LTCPAHTNLKSM*RGTCLAEQDGG Trigger: TCCTCCATCCTGTTCTGCCAAGCATGTTCCCCTCCACATTGATTTCAGGTTGGTGTGAGCTGGGCAGGTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000462933.1 |
||
| CDS CAA 72 bp | AAATGCATGGGGAAGTCCGGGATACTGCTCACACAGTaGTCAAGCTCCCCGGCAAGAATCTGGCCACTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: KCMGKSGILLTQ*SSSPARIWPLK Trigger: CTTCAGTGGCCAGATTCTTGCCGGGGAGCTTGACAACTGTGTGAGCAGTATCCCGGACTTCCCCATGCATTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000413464.6 |
||
| CDS TCA 72 bp | TCACATCGAGTCTCACCTGCCCAGCTCACACCAACCTaGAATCAATGTGGAGGGGAACATGCTTGGCAGAAC | + |
|
Preference number: 6 (lower is better) Translates to: SHRVSPAQLTPT*NQCGGEHAWQN Trigger: GTTCTGCCAAGCATGTTCCCCTCCACATTGATTTCAGGTTGGTGTGAGCTGGGCAGGTGAGACTCGATGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000462933.1 |
||
| CDS GCA 72 bp | CTTCCCGGTTGGAGTCAAGATCAGAATAGCTCCTCTTaGAGAACTGCCTTCGGCCCCCAAAGCAGAGATCAA | + |
|
Preference number: 6 (lower is better) Translates to: LPGWSQDQNSSS*RTAFGPQSRDQ Trigger: TTGATCTCTGCTTTGGGGGCCGAAGGCAGTTCTGCAAGAGGAGCTATTCTGATCTTGACTCCAACCGGGAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000278070.7 ENST00000370012.1 ENST00000413464.6 |
||
| CDS CCA 72 bp | ATGGGGCTGGCTTGGGCAGAGTCGACCAATGAGAGATaGGTTGGTATAGGATTGGTTTGGATAGTGTCAGCC | + |
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Preference number: 6 (lower is better) Translates to: MGLAWAESTNER*VGIGLVWIVSA Trigger: GGCTGACACTATCCAAACCAATCCTATACCAACCCATCTCTCATTGGTCGACTCTGCCCAAGCCAGCCCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000413464.6 |
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| CDS CCA 72 bp | TCAGCTTCAACAGAGTCAACTGGCATGGGGCTGGCTTaGGCAGAGTCGACCAATGAGAGATGGGTTGGTATA | + |
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Preference number: 6 (lower is better) Translates to: SASTESTGMGLA*AESTNERWVGI Trigger: TATACCAACCCATCTCTCATTGGTCGACTCTGCCCAAGCCAGCCCCATGCCAGTTGACTCTGTTGAAGCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000413464.6 |
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| CDS CCA 72 bp | ACACCTTCAGCAGACACACATGCTAGAGCCTTCATCTaGGGACTTTGCACCAGGGCAGACACCTTGTGTTTC | + |
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Preference number: 6 (lower is better) Translates to: TPSADTHARAFI*GLCTRADTLCF Trigger: GAAACACAAGGTGTCTGCCCTGGTGCAAAGTCCCCAGATGAAGGCTCTAGCATGTGTGTCTGCTGAAGGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000278070.7 ENST00000370012.1 ENST00000413464.6 |
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| CDS CAA 90 bp | GACAGGTCCGATGCCTCAATTCCTGTGGAGGCACACAACACAGGATaGAAAACGAGCCCCTATCAACTTAGTACACAGGTCCCAGGAAGC | + |
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Preference number: 6 (lower is better) Translates to: DRSDASIPVEAHNTG*KTSPYQLSTQVPGS Trigger: GCTTCCTGGGACCTGTGTACTAAGTTGATAGGGGCTCGTTTTCAATCCTGTGTTGTGTGCCTCCACAGGAATTGAGGCATCGGACCTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000462933.1 |
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| CDS TCA 72 bp | TCACTGATGAAAGCCTGTACCACATCTTCAGAACCCTaGGTACGTGGGGTAGGCAGGAAGGACAGCTTCCTT | + |
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Preference number: 6 (lower is better) Translates to: SLMKACTTSSEP*VRGVGRKDSFL Trigger: AAGGAAGCTGTCCTTCCTGCCTACCCCACGTACTCAGGGTTCTGAAGATGTGGTACAGGCTTTCATCAGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000278070.7 ENST00000370012.1 ENST00000413464.6 ENST00000489648.5 |
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| CDS GCA 72 bp | CCTCCCGGGGTGACACAAGCAGCTCCGAATCAGGAATaGTGTCAAATGGAGAAAGGTTCTCAGAATCTGCAT | + |
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Preference number: 6 (lower is better) Translates to: PPGVTQAAPNQE*CQMEKGSQNLH Trigger: ATGCAGATTCTGAGAACCTTTCTCCATTTGACAGCATTCCTGATTCGGAGCTGCTTGTGTCACCCCGGGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000413464.6 |
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| CDS GCA 72 bp | TTTCTCAAACTGCTCCAGCAGACTGGACAGGTCCGATaGCTCAATTCCTGTGGAGGCACACAACACAGGATT | + |
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Preference number: 6 (lower is better) Translates to: FLKLLQQTGQVR*LNSCGGTQHRI Trigger: AATCCTGTGTTGTGTGCCTCCACAGGAATTGAGGCATCGGACCTGTCCAGTCTGCTGGAGCAGTTTGAGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000462933.1 |
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| CDS CCA 72 bp | TTGCTTTATCTTCCTCCTCAGGGCAGGCCAAATGCATaGGGAAGTCCGGGATACTGCTCACACAGTTGTCAA | + |
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Preference number: 6 (lower is better) Translates to: LLYLPPQGRPNA*GSPGYCSHSCQ Trigger: TTGACAACTGTGTGAGCAGTATCCCGGACTTCCCCATGCATTTGGCCTGCCCTGAGGAGGAAGATAAAGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000413464.6 |
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| CDS CCA 72 bp | TTTTGGCTTCTGATTTCTCAAACTGCTCCAGCAGACTaGACAGGTCCGATGCCTCAATTCCTGTGGAGGCAC | + |
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Preference number: 6 (lower is better) Translates to: FWLLISQTAPAD*TGPMPQFLWRH Trigger: GTGCCTCCACAGGAATTGAGGCATCGGACCTGTCCAGTCTGCTGGAGCAGTTTGAGAAATCAGAAGCCAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000462933.1 |
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| CDS GCA 72 bp | GGAGGACACTCCTTTTTGGCTTCTGATTTCTCAAACTaGTCCAGCAGACTGGACAGGTCCGATGCCTCAATT | + |
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Preference number: 6 (lower is better) Translates to: GGHSFLASDFSN*SSRLDRSDASI Trigger: AATTGAGGCATCGGACCTGTCCAGTCTGCTGGAGCAGTTTGAGAAATCAGAAGCCAAAAAGGAGTGTCCTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000278070.7 ENST00000370012.1 ENST00000413464.6 ENST00000462933.1 ENST00000489648.5 |
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| CDS CAA 72 bp | ATGCTGTCAAATGGAGAAAGGTTCTCAGAATCTGCATaGTCCAAGATCTCCGTCAGAGCCGTGAGCAGCGAC | + |
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Preference number: 6 (lower is better) Translates to: MLSNGERFSESA*SKISVRAVSSD Trigger: GTCGCTGCTCACGGCTCTGACGGAGATCTTGGACAATGCAGATTCTGAGAACCTTTCTCCATTTGACAGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000413464.6 |
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| CDS TCA 72 bp | AAAAAGGATAGCAGGGAAGGGCCCAAGGTTACCTCCTaGGGTTCTTCTGGGCCTGTTTCAACAATGTGTCAA | + |
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Preference number: 6 (lower is better) Translates to: KKDSREGPKVTS*GSSGPVSTMCQ Trigger: TTGACACATTGTTGAAACAGGCCCAGAAGAACCTCAGGAGGTAACCTTGGGCCCTTCCCTGCTATCCTTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000278070.7 ENST00000370012.1 ENST00000413464.6 |
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| CDS GCA 72 bp | AGGAATGCTGTCAAATGGAGAAAGGTTCTCAGAATCTaGATTGTCCAAGATCTCCGTCAGAGCCGTGAGCAG | + |
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Preference number: 6 (lower is better) Translates to: RNAVKWRKVLRI*IVQDLRQSREQ Trigger: CTGCTCACGGCTCTGACGGAGATCTTGGACAATGCAGATTCTGAGAACCTTTCTCCATTTGACAGCATTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000413464.6 |
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| CDS CAA 72 bp | GATGCCTCAATTCCTGTGGAGGCACACAACACAGGATaGAAAACGAGCCCCTATCAACTTAGTACACAGGTC | + |
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Preference number: 6 (lower is better) Translates to: DASIPVEAHNTG*KTSPYQLSTQV Trigger: GACCTGTGTACTAAGTTGATAGGGGCTCGTTTTCAATCCTGTGTTGTGTGCCTCCACAGGAATTGAGGCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000462933.1 |
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| CDS CCA 72 bp | TACTCAGATAAGCTGAGAGGCCGAGGTCTGGCTTCATaGGTTGTAGCACTGGTACCACTTTCAATTTTCAGA | + |
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Preference number: 6 (lower is better) Translates to: YSDKLRGRGLAS*VVALVPLSIFR Trigger: TCTGAAAATTGAAAGTGGTACCAGTGCTACAACCCATGAAGCCAGACCTCGGCCTCTCAGCTTATCTGAGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000278070.7 ENST00000413464.6 |
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| CDS TCA 72 bp | AATCTCTCCAAAAACGGAGAACCTCTGTTTCAGCTCTaGTCGAGTCATGCGGCCAGGTATCTTTCCAATGAA | + |
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Preference number: 6 (lower is better) Translates to: NLSKNGEPLFQL*SSHAARYLSNE Trigger: TTCATTGGAAAGATACCTGGCCGCATGACTCGATCAGAGCTGAAACAGAGGTTCTCCGTTTTTGGAGAGATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000278070.7 ENST00000370012.1 ENST00000413464.6 ENST00000489648.5 ENST00000495914.1 |
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| CDS GCA 72 bp | GTCAAAGTCAAGAGAATCAAATTTGCTCTTTACAGGTaGTGGGTCAAAGTCTTCCCGGTTGGAGTCAAGATC | + |
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Preference number: 6 (lower is better) Translates to: VKVKRIKFALYR*WVKVFPVGVKI Trigger: GATCTTGACTCCAACCGGGAAGACTTTGACCCAGCACCTGTAAAGAGCAAATTTGATTCTCTTGACTTTGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000278070.7 ENST00000370012.1 ENST00000413464.6 |
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