Pregenerated sensors for PPP4R3C (Homo sapiens)
Ensembl gene IDs: ENSG00000224960Ensembl transcript IDs: ENST00000412172.4
Found 69 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | CCTCTAGAACAAAACTACATTAACATTATCGACCTGGTTCTTCCCCATTCCAAATCCTCCCCCAAATCGTaGCACAAATTAAGACTTTCT | + |
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Preference number: 2 (lower is better) Translates to: PLEQNYINIIDLVLPHSKSSPKS*HKLRLS Trigger: AGAAAGTCTTAATTTGTGTCACGATTTGGGGGAGGA...TTTGGAATGGGGAAGAACCAGGTCGATAATGTTAATGTAGTTTTGTTCTAGAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000412172.4 |
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| 3UTR-3UTR CAA 90 bp | AAAGATGGTTTCCTCCCCCAAATCGTGACACAAATTAAGACTTTCTTGCTAAAATTGTTGAGCCACATTTaGAGGGTGCCCCATATAGAT | + |
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Preference number: 3 (lower is better) Translates to: KDGFLPQIVTQIKTFLLKLLSHI*RVPHID Trigger: ATCTATATGGGGCACCCTCAAAATGTGGCTCAACAA...TTTTAGCAAGAAAGTCTTAATTTGTGTCACGATTTGGGGGAGGAAACCATCTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000412172.4 |
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| CDS-3UTR TCA 90 bp | CCTCTAGAACAAAACTACATTAACATTATCGACCTGGTTCTTCCCCATTCCAAAGTCTGGAGGTATCTGTaGCCGCAGGATGACCGACCC | + |
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Preference number: 4 (lower is better) Translates to: PLEQNYINIIDLVLPHSKVWRYL*PQDDRP Trigger: GGGTCGGTCATCCTGCGGTCACAGATACCTCCAGAC...TTTGGAATGGGGAAGAACCAGGTCGATAATGTTAATGTAGTTTTGTTCTAGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000412172.4 |
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| CDS-3UTR CCA 90 bp | CAAATCGTGACACAAATTAAGACTTTCTTGCTAAAAAGTTTATCACCCAGGTTCTGCCATAGCGTCCTCTaGCCTCGCCCCGTCAGGTCT | + |
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Preference number: 4 (lower is better) Translates to: QIVTQIKTFLLKSLSPRFCHSVL*PRPVRS Trigger: AGACCTGACGGGGCGAGGCCAGAGGACGCTATGGCA...GAACCTGGGTGATAAACTTTTTAGCAAGAAAGTCTTAATTTGTGTCACGATTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000412172.4 |
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| CDS-3UTR GCA 90 bp | GAACAAAACTACATTAACATTATCGACCTGGTTCTTCCCCATTCCAAACTAAGAACTGTACCTCAGGCCTaGCATAGCGTCCTCTGGCCT | + |
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Preference number: 4 (lower is better) Translates to: EQNYINIIDLVLPHSKLRTVPQA*HSVLWP Trigger: AGGCCAGAGGACGCTATGGCAGGCCTGAGGTACAGT...TCTTAGTTTGGAATGGGGAAGAACCAGGTCGATAATGTTAATGTAGTTTTGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000412172.4 |
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| CDS-3UTR TCA 90 bp | CTAGAACAAAACTACATTAACATTATCGACCTGGTTCTTCCCCATTCCAAACTATCTGTGACCGCAGGATaGCCGACCCATCTGAATCTG | + |
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Preference number: 4 (lower is better) Translates to: LEQNYINIIDLVLPHSKLSVTAG*PTHLNL Trigger: CAGATTCAGATGGGTCGGTCATCCTGCGGTCACAGA...TAGTTTGGAATGGGGAAGAACCAGGTCGATAATGTTAATGTAGTTTTGTTCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000412172.4 |
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| CDS-3UTR CCA 90 bp | AAAGATGGTTTCCTCCCCCAAATCGTGACACAAATTAAGACTTTCTTGCTAAAAACTGCTCGTCATAGGTaGATGAGACCTGACCGGTGC | + |
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Preference number: 4 (lower is better) Translates to: KDGFLPQIVTQIKTFLLKTARHR*MRPDRC Trigger: GCACCGGTCAGGTCTCATCCACCTATGACGAGCAGT...TTTTAGCAAGAAAGTCTTAATTTGTGTCACGATTTGGGGGAGGAAACCATCTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000412172.4 |
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| CDS-3UTR CCA 90 bp | AAAGATGGTTTCCTCCCCCAAATCGTGACACAAATTAAGACTTTCTTGCTAAAACAGCCGGCTGGGTCCTaGAATTTTAGCACCAAACCC | + |
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Preference number: 4 (lower is better) Translates to: KDGFLPQIVTQIKTFLLKQPAGS*NFSTKP Trigger: GGGTTTGGTGCTAAAATTCCAGGACCCAGCCGGCTG...TTTTAGCAAGAAAGTCTTAATTTGTGTCACGATTTGGGGGAGGAAACCATCTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000412172.4 |
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| CDS-3UTR CCA 90 bp | GAACAAAACTACATTAACATTATCGACCTGGTTCTTCCCCATTCCAAACTAAGATCTTTCCAAATATCCTaGCAGCCGGCTGGGTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: EQNYINIIDLVLPHSKLRSFQIS*QPAGSW Trigger: CCAGGACCCAGCCGGCTGCCAGGATATTTGGAAAGA...TCTTAGTTTGGAATGGGGAAGAACCAGGTCGATAATGTTAATGTAGTTTTGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000412172.4 |
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| CDS-3UTR TCA 90 bp | AAAGATGGTTTCCTCCCCCAAATCGTGACACAAATTAAGACTTTCTTGCTAAAACTCACAGTTGTGTTCTaGGGTGGCAGCCAAAAGTGG | + |
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Preference number: 4 (lower is better) Translates to: KDGFLPQIVTQIKTFLLKLTVVF*GGSQKW Trigger: CCACTTTTGGCTGCCACCTCAGAACACAACTGTGAG...TTTTAGCAAGAAAGTCTTAATTTGTGTCACGATTTGGGGGAGGAAACCATCTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000412172.4 |
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| CDS-3UTR GCA 90 bp | GAACAAAACTACATTAACATTATCGACCTGGTTCTTCCCCATTCCAAACTAAGAGAACAAGCAGCGACATaGCCTGGAACTGCTCGTCAT | + |
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Preference number: 4 (lower is better) Translates to: EQNYINIIDLVLPHSKLREQAAT*PGTARH Trigger: ATGACGAGCAGTTCCAGGGCATGTCGCTGCTTGTTC...TCTTAGTTTGGAATGGGGAAGAACCAGGTCGATAATGTTAATGTAGTTTTGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000412172.4 |
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| CDS-3UTR GCA 90 bp | AAAGATGGTTTCCTCCCCCAAATCGTGACACAAATTAAGACTTTCTTGCTAAAACTAAACGAACCACACTaGTACCACTTGGGCTACCTG | + |
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Preference number: 4 (lower is better) Translates to: KDGFLPQIVTQIKTFLLKLNEPH*YHLGYL Trigger: CAGGTAGCCCAAGTGGTAGCAGTGTGGTTCGTTTAG...TTTTAGCAAGAAAGTCTTAATTTGTGTCACGATTTGGGGGAGGAAACCATCTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000412172.4 |
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| CDS-3UTR CCA 90 bp | AAAGATGGTTTCCTCCCCCAAATCGTGACACAAATTAAGACTTTCTTGCTAAAACACACTGCTACCACTTaGGCTACCTGTTCCAATAGC | + |
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Preference number: 4 (lower is better) Translates to: KDGFLPQIVTQIKTFLLKHTATT*ATCSNS Trigger: GCTATTGGAACAGGTAGCCCAAGTGGTAGCAGTGTG...TTTTAGCAAGAAAGTCTTAATTTGTGTCACGATTTGGGGGAGGAAACCATCTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000412172.4 |
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| CDS-3UTR GCA 90 bp | AAAGATGGTTTCCTCCCCCAAATCGTGACACAAATTAAGACTTTCTTGCTAAAAATGAGACCTGACCGGTaGCTAGATTGTTCCATTCCT | + |
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Preference number: 4 (lower is better) Translates to: KDGFLPQIVTQIKTFLLKMRPDR*LDCSIP Trigger: AGGAATGGAACAATCTAGGCACCGGTCAGGTCTCAT...TTTTAGCAAGAAAGTCTTAATTTGTGTCACGATTTGGGGGAGGAAACCATCTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000412172.4 |
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| CDS-3UTR TCA 90 bp | CTAGAACAAAACTACATTAACATTATCGACCTGGTTCTTCCCCATTCCAAACTAGACGGATCCTTACCTTaGGCTTGGCAAATTTCTTTC | + |
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Preference number: 4 (lower is better) Translates to: LEQNYINIIDLVLPHSKLDGSLP*AWQISF Trigger: GAAAGAAATTTGCCAAGCTCAAGGTAAGGATCCGTC...TAGTTTGGAATGGGGAAGAACCAGGTCGATAATGTTAATGTAGTTTTGTTCTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000412172.4 |
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| CDS-3UTR TCA 90 bp | GAACAAAACTACATTAACATTATCGACCTGGTTCTTCCCCATTCCAAACTAAGAATCCCACCACATCCATaGTACACTCGTCAGAAAACA | + |
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Preference number: 4 (lower is better) Translates to: EQNYINIIDLVLPHSKLRIPPHP*YTRQKT Trigger: TGTTTTCTGACGAGTGTATCATGGATGTGGTGGGAT...TCTTAGTTTGGAATGGGGAAGAACCAGGTCGATAATGTTAATGTAGTTTTGTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000412172.4 |
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| CDS-3UTR GCA 90 bp | CCTCTAGAACAAAACTACATTAACATTATCGACCTGGTTCTTCCCCATTCCAAACAAATAGTGCATCCTTaGTTTGAGGCTGTAATGCCT | + |
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Preference number: 4 (lower is better) Translates to: PLEQNYINIIDLVLPHSKQIVHP*FEAVMP Trigger: AGGCATTACAGCCTCAAAGCAAGGATGCACTATTTG...TTTGGAATGGGGAAGAACCAGGTCGATAATGTTAATGTAGTTTTGTTCTAGAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000412172.4 |
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| CDS-3UTR GCA 90 bp | CCTCTAGAACAAAACTACATTAACATTATCGACCTGGTTCTTCCCCATTCCAAAGTGTTGTCAGCATGTTaGGTGGATCAAGTAGAGTAT | + |
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Preference number: 4 (lower is better) Translates to: PLEQNYINIIDLVLPHSKVLSAC*VDQVEY Trigger: ATACTCTACTTGATCCACGCAACATGCTGACAACAC...TTTGGAATGGGGAAGAACCAGGTCGATAATGTTAATGTAGTTTTGTTCTAGAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000412172.4 |
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| CDS-3UTR GCA 90 bp | GAACAAAACTACATTAACATTATCGACCTGGTTCTTCCCCATTCCAAACTAAGATGGGAGAGTCTACCTTaGCTTCATGTTCTTGGTTTC | + |
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Preference number: 4 (lower is better) Translates to: EQNYINIIDLVLPHSKLRWESLP*LHVLGF Trigger: GAAACCAAGAACATGAAGGCAAGGTAGACTCTCCCA...TCTTAGTTTGGAATGGGGAAGAACCAGGTCGATAATGTTAATGTAGTTTTGTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000412172.4 |
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| CDS-3UTR TCA 90 bp | GAACAAAACTACATTAACATTATCGACCTGGTTCTTCCCCATTCCAAACTAAGATTTGATCAAGTGTATTaGGTTCACAGTCAGGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: EQNYINIIDLVLPHSKLRFDQVY*VHSQAA Trigger: TGCTGCCTGACTGTGAACTCAATACACTTGATCAAA...TCTTAGTTTGGAATGGGGAAGAACCAGGTCGATAATGTTAATGTAGTTTTGTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000412172.4 |
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| CDS-3UTR TCA 90 bp | AAAGATGGTTTCCTCCCCCAAATCGTGACACAAATTAAGACTTTCTTGCTAAAATCTTCATCATCTGGATaGTCCACTAAACGAACCACA | + |
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Preference number: 4 (lower is better) Translates to: KDGFLPQIVTQIKTFLLKSSSSG*STKRTT Trigger: TGTGGTTCGTTTAGTGGATCATCCAGATGATGAAGA...TTTTAGCAAGAAAGTCTTAATTTGTGTCACGATTTGGGGGAGGAAACCATCTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000412172.4 |
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| CDS-3UTR TCA 90 bp | AAAGATGGTTTCCTCCCCCAAATCGTGACACAAATTAAGACTTTCTTGCTAAAATCCTCCCCCAAATCGTaGCACAAATTAAGACTTTCT | + |
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Preference number: 4 (lower is better) Translates to: KDGFLPQIVTQIKTFLLKSSPKS*HKLRLS Trigger: AGAAAGTCTTAATTTGTGTCACGATTTGGGGGAGGA...TTTTAGCAAGAAAGTCTTAATTTGTGTCACGATTTGGGGGAGGAAACCATCTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000412172.4 |
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| CDS-3UTR GCA 90 bp | CTAGAACAAAACTACATTAACATTATCGACCTGGTTCTTCCCCATTCCAAACTAGCAGCTGACCTTACTTaGAAATCATCCCTGATCATT | + |
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Preference number: 4 (lower is better) Translates to: LEQNYINIIDLVLPHSKLAADLT*KSSLII Trigger: AATGATCAGGGATGATTTGCAAGTAAGGTCAGCTGC...TAGTTTGGAATGGGGAAGAACCAGGTCGATAATGTTAATGTAGTTTTGTTCTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000412172.4 |
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| CDS-3UTR CCA 90 bp | GAACAAAACTACATTAACATTATCGACCTGGTTCTTCCCCATTCCAAACTAAGATTTAGCACCAAACCCTaGTTCTCAGCTTCATACCAA | + |
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Preference number: 4 (lower is better) Translates to: EQNYINIIDLVLPHSKLRFSTKP*FSASYQ Trigger: TTGGTATGAAGCTGAGAACCAGGGTTTGGTGCTAAA...TCTTAGTTTGGAATGGGGAAGAACCAGGTCGATAATGTTAATGTAGTTTTGTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000412172.4 |
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| CDS-3UTR CCA 90 bp | GAACAAAACTACATTAACATTATCGACCTGGTTCTTCCCCATTCCAAACTAAGAATGTTCACTGTGGTTTaGATAGACGGATCCTTACCT | + |
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Preference number: 4 (lower is better) Translates to: EQNYINIIDLVLPHSKLRMFTVV*IDGSLP Trigger: AGGTAAGGATCCGTCTATCCAAACCACAGTGAACAT...TCTTAGTTTGGAATGGGGAAGAACCAGGTCGATAATGTTAATGTAGTTTTGTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000412172.4 |
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| CDS-3UTR CCA 90 bp | CTAGAACAAAACTACATTAACATTATCGACCTGGTTCTTCCCCATTCCAAACTAGGTGGCAGCCAAAAGTaGTGCTGTAAATTTATGCAT | + |
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Preference number: 4 (lower is better) Translates to: LEQNYINIIDLVLPHSKLGGSQK*CCKFMH Trigger: ATGCATAAATTTACAGCACCACTTTTGGCTGCCACC...TAGTTTGGAATGGGGAAGAACCAGGTCGATAATGTTAATGTAGTTTTGTTCTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000412172.4 |
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| CDS-3UTR CCA 90 bp | AAAGATGGTTTCCTCCCCCAAATCGTGACACAAATTAAGACTTTCTTGCTAAAACAGAAGATGTTCTTTTaGGAGAGTCTACCTTGCCTT | + |
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Preference number: 4 (lower is better) Translates to: KDGFLPQIVTQIKTFLLKQKMFF*ESLPCL Trigger: AAGGCAAGGTAGACTCTCCCAAAAGAACATCTTCTG...TTTTAGCAAGAAAGTCTTAATTTGTGTCACGATTTGGGGGAGGAAACCATCTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000412172.4 |
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| CDS-3UTR CCA 90 bp | CCTCTAGAACAAAACTACATTAACATTATCGACCTGGTTCTTCCCCATTCCAAAGATGAGGTTTCTTCTTaGGGGATGTTTCATCTTCTT | + |
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Preference number: 4 (lower is better) Translates to: PLEQNYINIIDLVLPHSKDEVSS*GMFHLL Trigger: AAGAAGATGAAACATCCCCCAAGAAGAAACCTCATC...TTTGGAATGGGGAAGAACCAGGTCGATAATGTTAATGTAGTTTTGTTCTAGAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000412172.4 |
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| CDS-3UTR TCA 90 bp | CAAATCGTGACACAAATTAAGACTTTCTTGCTAAAAAGTTTATCACCCAGGTTCTTCCTCTGGTTCATCTaGAATGTTCACTGTGGTTTG | + |
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Preference number: 4 (lower is better) Translates to: QIVTQIKTFLLKSLSPRFFLWFI*NVHCGL Trigger: CAAACCACAGTGAACATTTCAGATGAACCAGAGGAA...GAACCTGGGTGATAAACTTTTTAGCAAGAAAGTCTTAATTTGTGTCACGATTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000412172.4 |
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| CDS-3UTR TCA 90 bp | GAACAAAACTACATTAACATTATCGACCTGGTTCTTCCCCATTCCAAACTAAGAGCACACGTGAGCTTCTaGAATTATAAATTCTCGGAT | + |
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Preference number: 4 (lower is better) Translates to: EQNYINIIDLVLPHSKLRAHVSF*NYKFSD Trigger: ATCCGAGAATTTATAATTTCAGAAGCTCACGTGTGC...TCTTAGTTTGGAATGGGGAAGAACCAGGTCGATAATGTTAATGTAGTTTTGTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000412172.4 |
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| CDS-3UTR TCA 90 bp | CAAATCGTGACACAAATTAAGACTTTCTTGCTAAAAAGTTTATCACCCAGGTTCAGAACTACCATCAAATaGACAGCACCTCCTAACTCA | + |
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Preference number: 4 (lower is better) Translates to: QIVTQIKTFLLKSLSPRFRTTIK*TAPPNS Trigger: TGAGTTAGGAGGTGCTGTTCATTTGATGGTAGTTCT...GAACCTGGGTGATAAACTTTTTAGCAAGAAAGTCTTAATTTGTGTCACGATTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000412172.4 |
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| CDS-3UTR TCA 90 bp | GAACAAAACTACATTAACATTATCGACCTGGTTCTTCCCCATTCCAAACTAAGACAGGTGAGTATGCTTTaGATTCATCAATATCAAGGC | + |
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Preference number: 4 (lower is better) Translates to: EQNYINIIDLVLPHSKLRQVSML*IHQYQG Trigger: GCCTTGATATTGATGAATTCAAAGCATACTCACCTG...TCTTAGTTTGGAATGGGGAAGAACCAGGTCGATAATGTTAATGTAGTTTTGTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000412172.4 |
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| CDS-3UTR GCA 90 bp | CTAGAACAAAACTACATTAACATTATCGACCTGGTTCTTCCCCATTCCAAACTAAAAGGTCACTATCTTTaGACACGTGAGCTTCTGAAA | + |
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Preference number: 4 (lower is better) Translates to: LEQNYINIIDLVLPHSKLKGHYL*TRELLK Trigger: TTTCAGAAGCTCACGTGTGCAAAGATAGTGACCTTT...TAGTTTGGAATGGGGAAGAACCAGGTCGATAATGTTAATGTAGTTTTGTTCTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000412172.4 |
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| CDS-3UTR GCA 90 bp | CAAATCGTGACACAAATTAAGACTTTCTTGCTAAAAAGTTTATCACCCAGGTTCGGCAGCCAAAAGTGGTaGTGTAAATTTATGCATGCA | + |
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Preference number: 4 (lower is better) Translates to: QIVTQIKTFLLKSLSPRFGSQKW*CKFMHA Trigger: TGCATGCATAAATTTACAGCACCACTTTTGGCTGCC...GAACCTGGGTGATAAACTTTTTAGCAAGAAAGTCTTAATTTGTGTCACGATTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000412172.4 |
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| CDS-3UTR CCA 90 bp | GAACAAAACTACATTAACATTATCGACCTGGTTCTTCCCCATTCCAAACTAAGATTAACATTATCGACCTaGTTCTTCCCCATTCCAAAC | + |
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Preference number: 4 (lower is better) Translates to: EQNYINIIDLVLPHSKLRLTLST*FFPIPN Trigger: GTTTGGAATGGGGAAGAACCAGGTCGATAATGTTAA...TCTTAGTTTGGAATGGGGAAGAACCAGGTCGATAATGTTAATGTAGTTTTGTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000412172.4 |
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| CDS-3UTR TCA 90 bp | CAAATCGTGACACAAATTAAGACTTTCTTGCTAAAAAGTTTATCACCCAGGTTCAGCAGTTGTGCTGTTTaGTTATCATTGGGGCAATTT | + |
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Preference number: 4 (lower is better) Translates to: QIVTQIKTFLLKSLSPRFSSCAV*LSLGQF Trigger: AAATTGCCCCAATGATAATCAAACAGCACAACTGCT...GAACCTGGGTGATAAACTTTTTAGCAAGAAAGTCTTAATTTGTGTCACGATTTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000412172.4 |
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| CDS-3UTR TCA 90 bp | GAACAAAACTACATTAACATTATCGACCTGGTTCTTCCCCATTCCAAACTAAGAACACACAAAATCAGGTaGGTATGCTTTGAATTCATC | + |
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Preference number: 4 (lower is better) Translates to: EQNYINIIDLVLPHSKLRTHKIR*VCFEFI Trigger: GATGAATTCAAAGCATACTCACCTGATTTTGTGTGT...TCTTAGTTTGGAATGGGGAAGAACCAGGTCGATAATGTTAATGTAGTTTTGTTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000412172.4 |
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| CDS-3UTR TCA 90 bp | GAACAAAACTACATTAACATTATCGACCTGGTTCTTCCCCATTCCAAACTAAGAAAGATGAAGAGAATTTaGAGTCACCAGAAGATGTTC | + |
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Preference number: 4 (lower is better) Translates to: EQNYINIIDLVLPHSKLRKMKRI*SHQKMF Trigger: GAACATCTTCTGGTGACTTCAAATTCTCTTCATCTT...TCTTAGTTTGGAATGGGGAAGAACCAGGTCGATAATGTTAATGTAGTTTTGTTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000412172.4 |
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| CDS-3UTR TCA 90 bp | AAAGATGGTTTCCTCCCCCAAATCGTGACACAAATTAAGACTTTCTTGCTAAAAAATGAAAGTACACTCTaGAAGCTACTTCCTTCCAAT | + |
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Preference number: 4 (lower is better) Translates to: KDGFLPQIVTQIKTFLLKNESTL*KLLPSN Trigger: ATTGGAAGGAAGTAGCTTTCAGAGTGTACTTTCATT...TTTTAGCAAGAAAGTCTTAATTTGTGTCACGATTTGGGGGAGGAAACCATCTTT 37% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENST00000412172.4 |
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| CDS-3UTR GCA 90 bp | CTAGAACAAAACTACATTAACATTATCGACCTGGTTCTTCCCCATTCCAAACTATATCTCAAACAGACATaGCTCGTTGAGGAACAAAAT | + |
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Preference number: 4 (lower is better) Translates to: LEQNYINIIDLVLPHSKLYLKQT*LVEEQN Trigger: ATTTTGTTCCTCAACGAGGCATGTCTGTTTGAGATA...TAGTTTGGAATGGGGAAGAACCAGGTCGATAATGTTAATGTAGTTTTGTTCTAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000412172.4 |
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| CDS-3UTR GCA 90 bp | CAAATCGTGACACAAATTAAGACTTTCTTGCTAAAAAGTTTATCACCCAGGTTCCAAAGCAAGCAGTTGTaGTGTTTGATTATCATTGGG | + |
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Preference number: 4 (lower is better) Translates to: QIVTQIKTFLLKSLSPRFQSKQL*CLIIIG Trigger: CCCAATGATAATCAAACAGCACAACTGCTTGCTTTG...GAACCTGGGTGATAAACTTTTTAGCAAGAAAGTCTTAATTTGTGTCACGATTTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000412172.4 |
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| CDS-3UTR CCA 90 bp | CAAATCGTGACACAAATTAAGACTTTCTTGCTAAAAAGTTTATCACCCAGGTTCAGATTTTCACAAGTGTaGAACAGTTGCAGTAGTTTT | + |
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Preference number: 4 (lower is better) Translates to: QIVTQIKTFLLKSLSPRFRFSQV*NSCSSF Trigger: AAAACTACTGCAACTGTTCCACACTTGTGAAAATCT...GAACCTGGGTGATAAACTTTTTAGCAAGAAAGTCTTAATTTGTGTCACGATTTG 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000412172.4 |
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| CDS GCA 90 bp | CTCGTCTTCGTTCAGGACATAGACTTTTACACTGTACCTCAGGCCTaGCATAGCGTCCTCTGGCCTCGCCCCGTCAGGTCTGTTCTCCAC | + |
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Preference number: 5 (lower is better) Translates to: LVFVQDIDFYTVPQA*HSVLWPRPVRSVLH Trigger: GTGGAGAACAGACCTGACGGGGCGAGGCCAGAGGACGCTATGGCAGGCCTGAGGTACAGTGTAAAAGTCTATGTCCTGAACGAAGACGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000412172.4 |
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| CDS TCA 90 bp | TCATCTGAAATGTTCACTGTGGTTTGGATAGACGGATCCTTACCTTaGGCTTGGCAAATTTCTTTCCAAATATCCTGGCAGCCGGCTGGG | + |
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Preference number: 5 (lower is better) Translates to: SSEMFTVVWIDGSLP*AWQISFQISWQPAG Trigger: CCCAGCCGGCTGCCAGGATATTTGGAAAGAAATTTGCCAAGCTCAAGGTAAGGATCCGTCTATCCAAACCACAGTGAACATTTCAGATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000412172.4 |
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| CDS-3UTR CAA 90 bp | CTAGAACAAAACTACATTAACATTATCGACCTGGTTCTTCCCCATTCCAAACTATCATCCTCCTCACAGTaGTGTTCTGAGGTGGCAGCC | + |
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Preference number: 5 (lower is better) Translates to: LEQNYINIIDLVLPHSKLSSSSQ*CSEVAA Trigger: GGCTGCCACCTCAGAACACAACTGTGAGGAGGATGA...TAGTTTGGAATGGGGAAGAACCAGGTCGATAATGTTAATGTAGTTTTGTTCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000412172.4 |
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| CDS TCA 90 bp | ACCACTTGGGCTACCTGTTCCAATAGCAGCACAAGCAGAATAAGATaGAGAGAATTTGAAGTCACCAGAAGATGTTCTTTTGGGAGAGTC | + |
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Preference number: 5 (lower is better) Translates to: TTWATCSNSSTSRIR*REFEVTRRCSFGRV Trigger: GACTCTCCCAAAAGAACATCTTCTGGTGACTTCAAATTCTCTTCATCTTATTCTGCTTGTGCTGCTATTGGAACAGGTAGCCCAAGTGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000412172.4 |
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| CDS-3UTR CAA 90 bp | CCTCTAGAACAAAACTACATTAACATTATCGACCTGGTTCTTCCCCATTCCAAACACTTTTCTCAGGTGTaGTCAGCATGTTGCGTGGAT | + |
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Preference number: 5 (lower is better) Translates to: PLEQNYINIIDLVLPHSKHFSQV*SACCVD Trigger: ATCCACGCAACATGCTGACAACACCTGAGAAAAGTG...TTTGGAATGGGGAAGAACCAGGTCGATAATGTTAATGTAGTTTTGTTCTAGAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000412172.4 |
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| CDS TCA 90 bp | TCTTTTTCTTCTTCATCTTCCTCTTTTTCTTCTTCATCATCTGGATaGTCCACTAAACGAACCACACTGCTACCACTTGGGCTACCTGTT | + |
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Preference number: 5 (lower is better) Translates to: SFSSSSSSFSSSSSG*STKRTTLLPLGLPV Trigger: AACAGGTAGCCCAAGTGGTAGCAGTGTGGTTCGTTTAGTGGATCATCCAGATGATGAAGAAGAAAAAGAGGAAGATGAAGAAGAAAAAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000412172.4 |
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| CDS-3UTR CAA 90 bp | CCTCTAGAACAAAACTACATTAACATTATCGACCTGGTTCTTCCCCATTCCAAAAATGTTCACTGTGGTTaGGATAGACGGATCCTTACC | + |
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Preference number: 5 (lower is better) Translates to: PLEQNYINIIDLVLPHSKNVHCG*DRRILT Trigger: GGTAAGGATCCGTCTATCCAAACCACAGTGAACATT...TTTGGAATGGGGAAGAACCAGGTCGATAATGTTAATGTAGTTTTGTTCTAGAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000412172.4 |
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| CDS-3UTR CAA 90 bp | CTAGAACAAAACTACATTAACATTATCGACCTGGTTCTTCCCCATTCCAAACTATTGAACTTCGCATCGTaGGTCAAGAAGTCCCTATGC | + |
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Preference number: 5 (lower is better) Translates to: LEQNYINIIDLVLPHSKLLNFAS*VKKSLC Trigger: GCATAGGGACTTCTTGACCAACGATGCGAAGTTCAA...TAGTTTGGAATGGGGAAGAACCAGGTCGATAATGTTAATGTAGTTTTGTTCTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000412172.4 |
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| CDS-3UTR CAA 90 bp | GAACAAAACTACATTAACATTATCGACCTGGTTCTTCCCCATTCCAAACTAAGAGGTGTTGTCAGCATGTaGCGTGGATCAAGTAGAGTA | + |
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Preference number: 5 (lower is better) Translates to: EQNYINIIDLVLPHSKLRGVVSM*RGSSRV Trigger: TACTCTACTTGATCCACGCAACATGCTGACAACACC...TCTTAGTTTGGAATGGGGAAGAACCAGGTCGATAATGTTAATGTAGTTTTGTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000412172.4 |
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| CDS-3UTR CAA 90 bp | GAACAAAACTACATTAACATTATCGACCTGGTTCTTCCCCATTCCAAACTAAGACCAGAAGATGTTCTTTaGGGAGAGTCTACCTTGCCT | + |
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Preference number: 5 (lower is better) Translates to: EQNYINIIDLVLPHSKLRPEDVL*GESTLP Trigger: AGGCAAGGTAGACTCTCCCAAAAGAACATCTTCTGG...TCTTAGTTTGGAATGGGGAAGAACCAGGTCGATAATGTTAATGTAGTTTTGTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000412172.4 |
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| CDS-3UTR CAA 90 bp | CCTCTAGAACAAAACTACATTAACATTATCGACCTGGTTCTTCCCCATTCCAAAAACAGACATGCCTCGTaGAGGAACAAAATTCCCTTA | + |
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Preference number: 5 (lower is better) Translates to: PLEQNYINIIDLVLPHSKNRHAS*RNKIPL Trigger: TAAGGGAATTTTGTTCCTCAACGAGGCATGTCTGTT...TTTGGAATGGGGAAGAACCAGGTCGATAATGTTAATGTAGTTTTGTTCTAGAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000412172.4 |
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| CDS-3UTR CAA 90 bp | CTAGAACAAAACTACATTAACATTATCGACCTGGTTCTTCCCCATTCCAAACTATTGGGAGAGTCTACCTaGCCTTCATGTTCTTGGTTT | + |
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Preference number: 5 (lower is better) Translates to: LEQNYINIIDLVLPHSKLLGEST*PSCSWF Trigger: AAACCAAGAACATGAAGGCAAGGTAGACTCTCCCAA...TAGTTTGGAATGGGGAAGAACCAGGTCGATAATGTTAATGTAGTTTTGTTCTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000412172.4 |
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| CDS-3UTR CAA 90 bp | AAAGATGGTTTCCTCCCCCAAATCGTGACACAAATTAAGACTTTCTTGCTAAAAAGACGGATCCTTACCTaGAGCTTGGCAAATTTCTTT | + |
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Preference number: 5 (lower is better) Translates to: KDGFLPQIVTQIKTFLLKRRILT*SLANFF Trigger: AAAGAAATTTGCCAAGCTCAAGGTAAGGATCCGTCT...TTTTAGCAAGAAAGTCTTAATTTGTGTCACGATTTGGGGGAGGAAACCATCTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000412172.4 |
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| CDS-3UTR CAA 90 bp | CAAATCGTGACACAAATTAAGACTTTCTTGCTAAAAAGTTTATCACCCAGGTTCTTGTTGAGCCACATTTaGAGGGTGCCCCATATAGAT | + |
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Preference number: 5 (lower is better) Translates to: QIVTQIKTFLLKSLSPRFLLSHI*RVPHID Trigger: ATCTATATGGGGCACCCTCAAAATGTGGCTCAACAA...GAACCTGGGTGATAAACTTTTTAGCAAGAAAGTCTTAATTTGTGTCACGATTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000412172.4 |
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| CDS-3UTR CAA 90 bp | CCTCTAGAACAAAACTACATTAACATTATCGACCTGGTTCTTCCCCATTCCAAAATCCTTACCTTGAGCTaGGCAAATTTCTTTCCAAAT | + |
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Preference number: 5 (lower is better) Translates to: PLEQNYINIIDLVLPHSKILTLS*ANFFPN Trigger: ATTTGGAAAGAAATTTGCCAAGCTCAAGGTAAGGAT...TTTGGAATGGGGAAGAACCAGGTCGATAATGTTAATGTAGTTTTGTTCTAGAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000412172.4 |
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| CDS-3UTR CAA 90 bp | CAAATCGTGACACAAATTAAGACTTTCTTGCTAAAAAGTTTATCACCCAGGTTCTCTTGGTGGGTTCTTTaGGTCTCCGTAAATTTATCG | + |
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Preference number: 5 (lower is better) Translates to: QIVTQIKTFLLKSLSPRFSWWVL*VSVNLS Trigger: CGATAAATTTACGGAGACCAAAAGAACCCACCAAGA...GAACCTGGGTGATAAACTTTTTAGCAAGAAAGTCTTAATTTGTGTCACGATTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000412172.4 |
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| CDS-3UTR CAA 90 bp | CTAGAACAAAACTACATTAACATTATCGACCTGGTTCTTCCCCATTCCAAACTAGGGCAATTTTTGCTTTaGTCATATCCAGCTATATCA | + |
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Preference number: 5 (lower is better) Translates to: LEQNYINIIDLVLPHSKLGQFLL*SYPAIS Trigger: TGATATAGCTGGATATGACAAAAGCAAAAATTGCCC...TAGTTTGGAATGGGGAAGAACCAGGTCGATAATGTTAATGTAGTTTTGTTCTAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000412172.4 |
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| CDS-3UTR CAA 90 bp | GAACAAAACTACATTAACATTATCGACCTGGTTCTTCCCCATTCCAAACTAAGATCAGGTGAGTATGCTTaGAATTCATCAATATCAAGG | + |
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Preference number: 5 (lower is better) Translates to: EQNYINIIDLVLPHSKLRSGEYA*NSSISR Trigger: CCTTGATATTGATGAATTCAAAGCATACTCACCTGA...TCTTAGTTTGGAATGGGGAAGAACCAGGTCGATAATGTTAATGTAGTTTTGTTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000412172.4 |
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| CDS-3UTR CAA 90 bp | CTAGAACAAAACTACATTAACATTATCGACCTGGTTCTTCCCCATTCCAAACTATGTGAAACAAGAGGCTaGATATTTTCCACTCTTATG | + |
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Preference number: 5 (lower is better) Translates to: LEQNYINIIDLVLPHSKLCETRG*IFSTLM Trigger: CATAAGAGTGGAAAATATCAAGCCTCTTGTTTCACA...TAGTTTGGAATGGGGAAGAACCAGGTCGATAATGTTAATGTAGTTTTGTTCTAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000412172.4 |
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| CDS CCA 72 bp | TTTTACACTGTACCTCAGGCCTGCCATAGCGTCCTCTaGCCTCGCCCCGTCAGGTCTGTTCTCCACGGCACT | + |
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Preference number: 6 (lower is better) Translates to: FYTVPQACHSVL*PRPVRSVLHGT Trigger: AGTGCCGTGGAGAACAGACCTGACGGGGCGAGGCCAGAGGACGCTATGGCAGGCCTGAGGTACAGTGTAAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000412172.4 |
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| CDS TCA 72 bp | CATAGGGCCTGTCTGGAGGTATCTGTGACCGCAGGATaGCCGACCCATCTGAATCTGACCGAACAAGCAGCG | + |
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Preference number: 6 (lower is better) Translates to: HRACLEVSVTAG*PTHLNLTEQAA Trigger: CGCTGCTTGTTCGGTCAGATTCAGATGGGTCGGTCATCCTGCGGTCACAGATACCTCCAGACAGGCCCTATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000412172.4 |
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| CDS GCA 72 bp | GTTCAGGACATAGACTTTTACACTGTACCTCAGGCCTaGCATAGCGTCCTCTGGCCTCGCCCCGTCAGGTCT | + |
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Preference number: 6 (lower is better) Translates to: VQDIDFYTVPQA*HSVLWPRPVRS Trigger: AGACCTGACGGGGCGAGGCCAGAGGACGCTATGGCAGGCCTGAGGTACAGTGTAAAAGTCTATGTCCTGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000412172.4 |
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| CDS CAA 72 bp | CACTGTGGTTTGGATAGACGGATCCTTACCTTGAGCTaGGCAAATTTCTTTCCAAATATCCTGGCAGCCGGC | + |
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Preference number: 6 (lower is better) Translates to: HCGLDRRILTLS*ANFFPNILAAG Trigger: GCCGGCTGCCAGGATATTTGGAAAGAAATTTGCCAAGCTCAAGGTAAGGATCCGTCTATCCAAACCACAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000412172.4 |
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| CDS CAA 72 bp | CTTTTGTCATATCCAGCTATATCATCCTCCTCACAGTaGTGTTCTGAGGTGGCAGCCAAAAGTGGTGCTGTA | + |
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Preference number: 6 (lower is better) Translates to: LLSYPAISSSSQ*CSEVAAKSGAV Trigger: TACAGCACCACTTTTGGCTGCCACCTCAGAACACAACTGTGAGGAGGATGATATAGCTGGATATGACAAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000412172.4 |
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| CDS CAA 90 bp | CAGTATTCTCTAGATTTTCACAAGTGTGGAACAGTTGCAGTAGTTTaGGAATATAAGCCTCATTTTTCAAGATCTCAGCCAGTCTTTCCC | + |
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Preference number: 6 (lower is better) Translates to: QYSLDFHKCGTVAVV*EYKPHFSRSQPVFP Trigger: GGGAAAGACTGGCTGAGATCTTGAAAAATGAGGCTTATATTCCAAAACTACTGCAACTGTTCCACACTTGTGAAAATCTAGAGAATACTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000412172.4 |
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| CDS TCA 72 bp | AATGAAAAGGTCACTATCTTTGCACACGTGAGCTTCTaGAATTATAAATTCTCGGATCCTGGATGGACTGTA | + |
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Preference number: 6 (lower is better) Translates to: NEKVTIFAHVSF*NYKFSDPGWTV Trigger: TACAGTCCATCCAGGATCCGAGAATTTATAATTTCAGAAGCTCACGTGTGCAAAGATAGTGACCTTTTCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000412172.4 |
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| CDS TCA 72 bp | ATTACATTAATGAAAAGGTCACTATCTTTGCACACGTaGGCTTCTGAAATTATAAATTCTCGGATCCTGGAT | + |
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Preference number: 6 (lower is better) Translates to: ITLMKRSLSLHT*ASEIINSRILD Trigger: ATCCAGGATCCGAGAATTTATAATTTCAGAAGCTCACGTGTGCAAAGATAGTGACCTTTTCATTAATGTAAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000412172.4 |
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