RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PPP4C (Homo sapiens)

Ensembl gene IDs: ENSG00000149923

Ensembl transcript IDs: ENST00000279387.12, ENST00000561610.1, ENST00000562222.5, ENST00000562664.5, ENST00000563200.5, ENST00000563597.5, ENST00000563732.5, ENST00000564966.5, ENST00000566749.5, ENST00000567040.5, ENST00000567642.1, ENST00000567828.1, ENST00000568810.5, ENST00000627746.2

Found 358 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCTCTTGCTTTCGGTCGATTGTCCGAATCTGATCCAGGGTCTGGATaGAGGGGGAGAGGCCCCCGTGCACGCAGAAGATCTTGCCATCGA +
Preference number: 1 (lower is better)
Translates to: PLAFGRLSESDPGSG*RGRGPRARRRSCHR
Trigger: TCGATGGCAAGATCTTCTGCGTGCACGGGGGCCTCTCCCCCTCCATCCAGACCCTGGATCAGATTCGGACAATCGACCGAAAGCAAGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000563597.5
ENST00000563732.5
ENST00000566749.5
ENST00000627746.2
3UTR TCA 90 bp CCAGTTGGTGGGCACGGCAGATCATGTCAATGTCATTGGCTGCGTTaGACTGGGCCACCACGTCACTGCCAAATAGGTAGCCGGCTCCTC +
Preference number: 1 (lower is better)
Translates to: PVGGHGRSCQCHWLR*TGPPRHCQIGSRLL
Trigger: GAGGAGCCGGCTACCTATTTGGCAGTGACGTGGTGGCCCAGTTCAACGCAGCCAATGACATTGACATGATCTGCCGTGCCCACCAACTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566749.5
ENST00000627746.2
3UTR-3UTR CCA 90 bp AGCCTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGAAGGGTGAGGGCCAGAAGGGTTaGAGGGGGCAGGGGCCGGGC +
Preference number: 2 (lower is better)
Translates to: SLRLRKMAESQWCEGQKGEGQKG*RGQGPG
Trigger: GCCCGGCCCCTGCCCCCTCCAACCCTTCTGGCCCTC...ACCCTTCTGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
3UTR-3UTR CCA 90 bp CCACCACGTCACTGCCAAATAGGTAGCCGGCTCCTCGGGGGCTCACGCCCCAGCATGGCAGAGTCACAGTaGTGCGAGGGCCAGAAGGGT +
Preference number: 2 (lower is better)
Translates to: PPRHCQIGSRLLGGSRPSMAESQ*CEGQKG
Trigger: ACCCTTCTGGCCCTCGCACCACTGTGACTCTGCCAT...GCTGGGGCGTGAGCCCCCGAGGAGCCGGCTACCTATTTGGCAGTGACGTGGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000566749.5
ENST00000627746.2
3UTR-3UTR TCA 90 bp CCCAGCCTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGAAGCGCCCAGCCTCCGTCTaGGGAAGATGGCAGAGTCAC +
Preference number: 2 (lower is better)
Translates to: PSLRLRKMAESQWCEGQKRPASV*GRWQSH
Trigger: GTGACTCTGCCATCTTCCTCAGACGGAGGCTGGGCG...CTTCTGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAGGCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
3UTR-3UTR CCA 90 bp CCTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGAAGGGTTGGATCCAGGGTCTGGATaGAGGGGGAGAGGCCCCCGT +
Preference number: 2 (lower is better)
Translates to: PPSEEDGRVTVVRGPEGLDPGSG*RGRGPR
Trigger: ACGGGGGCCTCTCCCCCTCCATCCAGACCCTGGATC...CAACCCTTCTGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000566749.5
ENST00000627746.2
3UTR-3UTR TCA 90 bp CCTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGAAGGGTTGCGCCCAGCCTCCGTCTaGGGAAGATGGCAGAGTCAC +
Preference number: 2 (lower is better)
Translates to: PPSEEDGRVTVVRGPEGLRPASV*GRWQSH
Trigger: GTGACTCTGCCATCTTCCTCAGACGGAGGCTGGGCG...CAACCCTTCTGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
3UTR-3UTR CCA 90 bp ACACATGGGCCCATCATGAGGCACCTCTTGCTTTCGGTCGATTGTCCGAATCTGGAGGGCCAGAAGGGTTaGAGGGGGCAGGGGCCGGGC +
Preference number: 2 (lower is better)
Translates to: THGPIMRHLLLSVDCPNLEGQKG*RGQGPG
Trigger: GCCCGGCCCCTGCCCCCTCCAACCCTTCTGGCCCTC...CAGATTCGGACAATCGACCGAAAGCAAGAGGTGCCTCATGATGGGCCCATGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000566749.5
ENST00000627746.2
3UTR-3UTR CCA 90 bp CCCAGCCTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGAAGCTCGAAGCACCCTCTTaGGGGACAGCAGAGCCAGGA +
Preference number: 2 (lower is better)
Translates to: PSLRLRKMAESQWCEGQKLEAPS*GTAEPG
Trigger: TCCTGGCTCTGCTGTCCCCCAAGAGGGTGCTTCGAG...CTTCTGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAGGCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
3UTR-3UTR TCA 90 bp CCCAGCCTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGAAGTGTCATTGGCTGCGTTaGACTGGGCCACCACGTCAC +
Preference number: 2 (lower is better)
Translates to: PSLRLRKMAESQWCEGQKCHWLR*TGPPRH
Trigger: GTGACGTGGTGGCCCAGTTCAACGCAGCCAATGACA...CTTCTGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAGGCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566749.5
ENST00000627746.2
3UTR-3UTR GCA 90 bp CTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGAAGGGTTGGGCAGAGTCACAGTGGTaGGAGGGCCAGAAGGGTTGG +
Preference number: 2 (lower is better)
Translates to: LRLRKMAESQWCEGQKGWAESQW*EGQKGW
Trigger: CCAACCCTTCTGGCCCTCGCACCACTGTGACTCTGC...CCAACCCTTCTGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
3UTR-3UTR GCA 90 bp TGGATGGAGGGGGAGAGGCCCCCGTGCACGCAGAAGATCTTGCCATCGATGATGGCAGAGTCACAGTGGTaGGAGGGCCAGAAGGGTTGG +
Preference number: 2 (lower is better)
Translates to: WMEGERPPCTQKILPSMMAESQW*EGQKGW
Trigger: CCAACCCTTCTGGCCCTCGCACCACTGTGACTCTGC...CATCATCGATGGCAAGATCTTCTGCGTGCACGGGGGCCTCTCCCCCTCCATCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000566749.5
ENST00000627746.2
3UTR-3UTR CCA 90 bp CCCAGCCTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGAAGTTGGCTGCGTTGAACTaGGCCACCACGTCACTGCCA +
Preference number: 2 (lower is better)
Translates to: PSLRLRKMAESQWCEGQKLAALN*ATTSLP
Trigger: TGGCAGTGACGTGGTGGCCCAGTTCAACGCAGCCAA...CTTCTGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAGGCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566749.5
ENST00000627746.2
3UTR-3UTR CCA 90 bp CAAAGATCTCAGTGCAGTAGCGCCACACAGTCACCGAGCCGTACTTGCGCAGGCGCCGCACACTGTGACTaGCGAGTCCACCCTCTGCAC +
Preference number: 2 (lower is better)
Translates to: QRSQCSSATQSPSRTCAGAAHCD*RVHPLH
Trigger: GTGCAGAGGGTGGACTCGCCAGTCACAGTGTGCGGC...GCCTGCGCAAGTACGGCTCGGTGACTGTGTGGCGCTACTGCACTGAGATCTTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563597.5
3UTR CAA 90 bp GGTCACACATGGGCCCATCATGAGGCACCTCTTGCTTTCGGTCGATaGTCCGAATCTGATCCAGGGTCTGGATGGAGGGGGAGAGGCCCC +
Preference number: 2 (lower is better)
Translates to: GHTWAHHEAPLAFGR*SESDPGSGWRGRGP
Trigger: GGGGCCTCTCCCCCTCCATCCAGACCCTGGATCAGATTCGGACAATCGACCGAAAGCAAGAGGTGCCTCATGATGGGCCCATGTGTGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000563597.5
ENST00000563732.5
ENST00000566749.5
ENST00000627746.2
3UTR-3UTR GCA 90 bp CAAAGATCTCAGTGCAGTAGCGCCACACAGTCACCGAGCCGTACTTGCGCAGGCGCAGAGTCACAGTGGTaGGAGGGCCAGAAGGGTTGG +
Preference number: 2 (lower is better)
Translates to: QRSQCSSATQSPSRTCAGAESQW*EGQKGW
Trigger: CCAACCCTTCTGGCCCTCGCACCACTGTGACTCTGC...GCCTGCGCAAGTACGGCTCGGTGACTGTGTGGCGCTACTGCACTGAGATCTTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566749.5
ENST00000627746.2
3UTR-3UTR GCA 90 bp TGGGCACGGCAGATCATGTCAATGTCATTGGCTGCGTTGAACTGGGCCACCACGGGGGAGAGGCCCCCGTaGACGCAGAAGATCTTGCCA +
Preference number: 2 (lower is better)
Translates to: WARQIMSMSLAALNWATTGERPP*TQKILP
Trigger: TGGCAAGATCTTCTGCGTGCACGGGGGCCTCTCCCC...CGTGGTGGCCCAGTTCAACGCAGCCAATGACATTGACATGATCTGCCGTGCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000563732.5
ENST00000566749.5
ENST00000627746.2
3UTR-3UTR GCA 90 bp ACAGGAAGTAGTCGGCCACGGGCTTCTTGGAGGGGATGCCCCGTGTCTCTTGGGGTAGCAGTAGTTGGGTaGCGACCACACAGTGAGCAC +
Preference number: 2 (lower is better)
Translates to: TGSSRPRASWRGCPVSLGVAVVG*RPHSEH
Trigger: GTGCTCACTGTGTGGTCGGCACCCAACTACTGCTAC...CCCAAGAGACACGGGGCATCCCCTCCAAGAAGCCCGTGGCCGACTACTTCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000566749.5
ENST00000627746.2
3UTR-3UTR TCA 90 bp GGTAGTCAAAGATCTCAGTGCAGTAGCGCCACACAGTCACCGAGCCGTACTTGCCGCCCAGCCTCCGTCTaGGGAAGATGGCAGAGTCAC +
Preference number: 2 (lower is better)
Translates to: GSQRSQCSSATQSPSRTCRPASV*GRWQSH
Trigger: GTGACTCTGCCATCTTCCTCAGACGGAGGCTGGGCG...GCAAGTACGGCTCGGTGACTGTGTGGCGCTACTGCACTGAGATCTTTGACTACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566749.5
ENST00000627746.2
3UTR-3UTR TCA 90 bp CCCAGCCTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGAAGGCCATCGATGATGGCTaGCAGGCTGAGGTAGTCAAA +
Preference number: 2 (lower is better)
Translates to: PSLRLRKMAESQWCEGQKAIDDG*QAEVVK
Trigger: TTTGACTACCTCAGCCTGTCAGCCATCATCGATGGC...CTTCTGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAGGCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566749.5
ENST00000627746.2
3UTR-3UTR GCA 90 bp AGAGGAGGTCACACATGGGCCCATCATGAGGCACCTCTTGCTTTCGGTCGATTGGGGGAGAGGCCCCCGTaGACGCAGAAGATCTTGCCA +
Preference number: 2 (lower is better)
Translates to: RGGHTWAHHEAPLAFGRLGERPP*TQKILP
Trigger: TGGCAAGATCTTCTGCGTGCACGGGGGCCTCTCCCC...CAATCGACCGAAAGCAAGAGGTGCCTCATGATGGGCCCATGTGTGACCTCCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000563597.5
ENST00000563732.5
ENST00000566749.5
ENST00000627746.2
3UTR-3UTR CCA 90 bp GTGGGCACGGCAGATCATGTCAATGTCATTGGCTGCGTTGAACTGGGCCACCACTCACGCCCCAGCCTGTaGTGTCTTCTGGGTCAGACC +
Preference number: 2 (lower is better)
Translates to: VGTADHVNVIGCVELGHHSRPSL*CLLGQT
Trigger: GGTCTGACCCAGAAGACACCACAGGCTGGGGCGTGA...GTGGTGGCCCAGTTCAACGCAGCCAATGACATTGACATGATCTGCCGTGCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563732.5
ENST00000566749.5
ENST00000627746.2
3UTR-3UTR CCA 90 bp ACAGGAAGTAGTCGGCCACGGGCTTCTTGGAGGGGATGCCCCGTGTCTCTTGGGTCCATCACCAGTTGGTaGGCACGGCAGATCATGTCA +
Preference number: 2 (lower is better)
Translates to: TGSSRPRASWRGCPVSLGSITSW*ARQIMS
Trigger: TGACATGATCTGCCGTGCCCACCAACTGGTGATGGA...CCCAAGAGACACGGGGCATCCCCTCCAAGAAGCCCGTGGCCGACTACTTCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566749.5
ENST00000627746.2
3UTR-3UTR TCA 90 bp CAGTCACCGAGCCGTACTTGCGCAGGCACTCATCGTAGAAGCCATAGACCTGCGTGCCCCGGATCAGTGTaGTGCGATCAGGATAGCGAA +
Preference number: 2 (lower is better)
Translates to: QSPSRTCAGTHRRSHRPACPGSV*CDQDSE
Trigger: TTCGCTATCCTGATCGCATCACACTGATCCGGGGCA...CGCAGGTCTATGGCTTCTACGATGAGTGCCTGCGCAAGTACGGCTCGGTGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563597.5
ENST00000563732.5
ENST00000566749.5
ENST00000627746.2
3UTR-3UTR TCA 90 bp GAGGTCACACATGGGCCCATCATGAGGCACCTCTTGCTTTCGGTCGATTGTCCGCACATGGGCCCATCATaGGGCACCTCTTGCTTTCGG +
Preference number: 2 (lower is better)
Translates to: EVTHGPIMRHLLLSVDCPHMGPS*GTSCFR
Trigger: CCGAAAGCAAGAGGTGCCTCATGATGGGCCCATGTG...CGGACAATCGACCGAAAGCAAGAGGTGCCTCATGATGGGCCCATGTGTGACCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563597.5
ENST00000563732.5
ENST00000566749.5
ENST00000627746.2
3UTR-3UTR TCA 90 bp TGGGCACGGCAGATCATGTCAATGTCATTGGCTGCGTTGAACTGGGCCACCACGCACATGGGCCCATCATaGGGCACCTCTTGCTTTCGG +
Preference number: 2 (lower is better)
Translates to: WARQIMSMSLAALNWATTHMGPS*GTSCFR
Trigger: CCGAAAGCAAGAGGTGCCTCATGATGGGCCCATGTG...CGTGGTGGCCCAGTTCAACGCAGCCAATGACATTGACATGATCTGCCGTGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563732.5
ENST00000566749.5
ENST00000627746.2
3UTR-3UTR TCA 90 bp ACACATGGGCCCATCATGAGGCACCTCTTGCTTTCGGTCGATTGTCCGAATCTGTGTCGCCGCACACTGTaGCTGGCGAGTCCACCCTCT +
Preference number: 2 (lower is better)
Translates to: THGPIMRHLLLSVDCPNLCRRTL*LASPPS
Trigger: AGAGGGTGGACTCGCCAGTCACAGTGTGCGGCGACA...CAGATTCGGACAATCGACCGAAAGCAAGAGGTGCCTCATGATGGGCCCATGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563597.5
3UTR-3UTR GCA 90 bp GCAGTAGCGCCACACAGTCACCGAGCCGTACTTGCGCAGGCACTCATCGTAGAATCACCGAGCCGTACTTaGGCAGGCACTCATCGTAGA +
Preference number: 2 (lower is better)
Translates to: AVAPHSHRAVLAQALIVESPSRT*AGTHRR
Trigger: TCTACGATGAGTGCCTGCGCAAGTACGGCTCGGTGA...TTCTACGATGAGTGCCTGCGCAAGTACGGCTCGGTGACTGTGTGGCGCTACTGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563597.5
ENST00000563732.5
ENST00000566749.5
ENST00000627746.2
3UTR-3UTR GCA 90 bp GCGCCACACAGTCACCGAGCCGTACTTGCGCAGGCACTCATCGTAGAAGCCATATCACCGAGCCGTACTTaGGCAGGCACTCATCGTAGA +
Preference number: 2 (lower is better)
Translates to: APHSHRAVLAQALIVEAISPSRT*AGTHRR
Trigger: TCTACGATGAGTGCCTGCGCAAGTACGGCTCGGTGA...TATGGCTTCTACGATGAGTGCCTGCGCAAGTACGGCTCGGTGACTGTGTGGCGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563597.5
ENST00000563732.5
ENST00000566749.5
ENST00000627746.2
3UTR-3UTR GCA 90 bp ACAGGAAGTAGTCGGCCACGGGCTTCTTGGAGGGGATGCCCCGTGTCTCTTGGGAGTCAAAGATCTCAGTaGAGTAGCGCCACACAGTCA +
Preference number: 2 (lower is better)
Translates to: TGSSRPRASWRGCPVSLGSQRSQ*SSATQS
Trigger: TGACTGTGTGGCGCTACTGCACTGAGATCTTTGACT...CCCAAGAGACACGGGGCATCCCCTCCAAGAAGCCCGTGGCCGACTACTTCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566749.5
ENST00000627746.2
3UTR-3UTR GCA 90 bp ATCATGAGGCACCTCTTGCTTTCGGTCGATTGTCCGAATCTGATCCAGGGTCTGGGGGAGAGGCCCCCGTaGACGCAGAAGATCTTGCCA +
Preference number: 2 (lower is better)
Translates to: IMRHLLLSVDCPNLIQGLGERPP*TQKILP
Trigger: TGGCAAGATCTTCTGCGTGCACGGGGGCCTCTCCCC...CAGACCCTGGATCAGATTCGGACAATCGACCGAAAGCAAGAGGTGCCTCATGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000563597.5
ENST00000563732.5
ENST00000566749.5
ENST00000627746.2
3UTR-3UTR TCA 90 bp GTGGGCACGGCAGATCATGTCAATGTCATTGGCTGCGTTGAACTGGGCCACCACTCGATTGTCCGAATCTaGTCCAGGGTCTGGATGGAG +
Preference number: 2 (lower is better)
Translates to: VGTADHVNVIGCVELGHHSIVRI*SRVWME
Trigger: CTCCATCCAGACCCTGGATCAGATTCGGACAATCGA...GTGGTGGCCCAGTTCAACGCAGCCAATGACATTGACATGATCTGCCGTGCCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563732.5
ENST00000566749.5
ENST00000627746.2
3UTR-3UTR CCA 90 bp TTGGTGGGCACGGCAGATCATGTCAATGTCATTGGCTGCGTTGAACTGGGCCACATCTGGCGACTCTCATaGTTGCCCCGGATCAGTGTG +
Preference number: 2 (lower is better)
Translates to: LVGTADHVNVIGCVELGHIWRLS*LPRISV
Trigger: CACACTGATCCGGGGCAACCATGAGAGTCGCCAGAT...GTGGCCCAGTTCAACGCAGCCAATGACATTGACATGATCTGCCGTGCCCACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563732.5
ENST00000566749.5
ENST00000627746.2
3UTR-3UTR CCA 90 bp CTCTTGCTTTCGGTCGATTGTCCGAATCTGATCCAGGGTCTGGATGGAGGGGGAATCTGGCGACTCTCATaGTTGCCCCGGATCAGTGTG +
Preference number: 2 (lower is better)
Translates to: LLLSVDCPNLIQGLDGGGIWRLS*LPRISV
Trigger: CACACTGATCCGGGGCAACCATGAGAGTCGCCAGAT...TCCCCCTCCATCCAGACCCTGGATCAGATTCGGACAATCGACCGAAAGCAAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000563597.5
ENST00000563732.5
ENST00000566749.5
ENST00000627746.2
3UTR-3UTR CCA 90 bp ACACATGGGCCCATCATGAGGCACCTCTTGCTTTCGGTCGATTGTCCGAATCTGGCCTGTGGTGTCTTCTaGGTCAGACCAGAGGAGGTC +
Preference number: 2 (lower is better)
Translates to: THGPIMRHLLLSVDCPNLACGVF*VRPEEV
Trigger: GACCTCCTCTGGTCTGACCCAGAAGACACCACAGGC...CAGATTCGGACAATCGACCGAAAGCAAGAGGTGCCTCATGATGGGCCCATGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563732.5
ENST00000566749.5
ENST00000627746.2
3UTR-3UTR CCA 90 bp GTAACCTTCCATCACCAGTTGGTGGGCACGGCAGATCATGTCAATGTCATTGGCTCACGCCCCAGCCTGTaGTGTCTTCTGGGTCAGACC +
Preference number: 2 (lower is better)
Translates to: VTFHHQLVGTADHVNVIGSRPSL*CLLGQT
Trigger: GGTCTGACCCAGAAGACACCACAGGCTGGGGCGTGA...GCCAATGACATTGACATGATCTGCCGTGCCCACCAACTGGTGATGGAAGGTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566749.5
ENST00000627746.2
3UTR-3UTR TCA 90 bp TTGGTGGGCACGGCAGATCATGTCAATGTCATTGGCTGCGTTGAACTGGGCCACGCCATCGATGATGGCTaGCAGGCTGAGGTAGTCAAA +
Preference number: 2 (lower is better)
Translates to: LVGTADHVNVIGCVELGHAIDDG*QAEVVK
Trigger: TTTGACTACCTCAGCCTGTCAGCCATCATCGATGGC...GTGGCCCAGTTCAACGCAGCCAATGACATTGACATGATCTGCCGTGCCCACCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563732.5
ENST00000566749.5
ENST00000627746.2
3UTR-3UTR TCA 90 bp GTAGCAGTAGTTGGGTGCCGACCACACAGTGAGCACCGTCTCATTGAAGTGCCATCGATTGTCCGAATCTaGTCCAGGGTCTGGATGGAG +
Preference number: 2 (lower is better)
Translates to: VAVVGCRPHSEHRLIEVPSIVRI*SRVWME
Trigger: CTCCATCCAGACCCTGGATCAGATTCGGACAATCGA...TGGCACTTCAATGAGACGGTGCTCACTGTGTGGTCGGCACCCAACTACTGCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566749.5
ENST00000627746.2
3UTR-3UTR GCA 90 bp TTGGGGAGCAGCCTCAAAGATGATGAAATCTTTCTGGAGATGCTCGTCCAGCTCGGGCCACCACGTCACTaGCAAATAGGTAGCCGGCTC +
Preference number: 2 (lower is better)
Translates to: LGSSLKDDEIFLEMLVQLGPPRH*QIGSRL
Trigger: GAGCCGGCTACCTATTTGGCAGTGACGTGGTGGCCC...GAGCTGGACGAGCATCTCCAGAAAGATTTCATCATCTTTGAGGCTGCTCCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566749.5
ENST00000627746.2
3UTR-3UTR GCA 90 bp TTGGTGGGCACGGCAGATCATGTCAATGTCATTGGCTGCGTTGAACTGGGCCACGTCAATGTCATTGGCTaGGTTGAACTGGGCCACCAC +
Preference number: 2 (lower is better)
Translates to: LVGTADHVNVIGCVELGHVNVIG*VELGHH
Trigger: GTGGTGGCCCAGTTCAACGCAGCCAATGACATTGAC...GTGGCCCAGTTCAACGCAGCCAATGACATTGACATGATCTGCCGTGCCCACCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563732.5
ENST00000566749.5
ENST00000627746.2
3UTR-3UTR CCA 90 bp CACCGTCTCATTGAAGTGCCACTTGTAACCTTCCATCACCAGTTGGTGGGCACGATCTGGCGACTCTCATaGTTGCCCCGGATCAGTGTG +
Preference number: 2 (lower is better)
Translates to: HRLIEVPLVTFHHQLVGTIWRLS*LPRISV
Trigger: CACACTGATCCGGGGCAACCATGAGAGTCGCCAGAT...CGTGCCCACCAACTGGTGATGGAAGGTTACAAGTGGCACTTCAATGAGACGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566749.5
ENST00000627746.2
3UTR-3UTR TCA 90 bp ATCATGAGGCACCTCTTGCTTTCGGTCGATTGTCCGAATCTGATCCAGGGTCTGTGCCCCGGATCAGTGTaGTGCGATCAGGATAGCGAA +
Preference number: 2 (lower is better)
Translates to: IMRHLLLSVDCPNLIQGLCPGSV*CDQDSE
Trigger: TTCGCTATCCTGATCGCATCACACTGATCCGGGGCA...CAGACCCTGGATCAGATTCGGACAATCGACCGAAAGCAAGAGGTGCCTCATGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563597.5
ENST00000563732.5
ENST00000566749.5
ENST00000627746.2
3UTR-3UTR GCA 90 bp GTGGGCACGGCAGATCATGTCAATGTCATTGGCTGCGTTGAACTGGGCCACCACAGTCAAAGATCTCAGTaGAGTAGCGCCACACAGTCA +
Preference number: 2 (lower is better)
Translates to: VGTADHVNVIGCVELGHHSQRSQ*SSATQS
Trigger: TGACTGTGTGGCGCTACTGCACTGAGATCTTTGACT...GTGGTGGCCCAGTTCAACGCAGCCAATGACATTGACATGATCTGCCGTGCCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563732.5
ENST00000566749.5
ENST00000627746.2
3UTR-3UTR CCA 90 bp ATTGAAGTGCCACTTGTAACCTTCCATCACCAGTTGGTGGGCACGGCAGATCATATGGCAGAGTCACAGTaGTGCGAGGGCCAGAAGGGT +
Preference number: 2 (lower is better)
Translates to: IEVPLVTFHHQLVGTADHMAESQ*CEGQKG
Trigger: ACCCTTCTGGCCCTCGCACCACTGTGACTCTGCCAT...ATGATCTGCCGTGCCCACCAACTGGTGATGGAAGGTTACAAGTGGCACTTCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566749.5
ENST00000627746.2
3UTR-3UTR CCA 90 bp TTGGGGAGCAGCCTCAAAGATGATGAAATCTTTCTGGAGATGCTCGTCCAGCTCTTGGCTGCGTTGAACTaGGCCACCACGTCACTGCCA +
Preference number: 2 (lower is better)
Translates to: LGSSLKDDEIFLEMLVQLLAALN*ATTSLP
Trigger: TGGCAGTGACGTGGTGGCCCAGTTCAACGCAGCCAA...GAGCTGGACGAGCATCTCCAGAAAGATTTCATCATCTTTGAGGCTGCTCCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566749.5
ENST00000627746.2
3UTR-3UTR GCA 90 bp ACACAGTCACCGAGCCGTACTTGCGCAGGCACTCATCGTAGAAGCCATAGACCTAGTCAAAGATCTCAGTaGAGTAGCGCCACACAGTCA +
Preference number: 2 (lower is better)
Translates to: TQSPSRTCAGTHRRSHRPSQRSQ*SSATQS
Trigger: TGACTGTGTGGCGCTACTGCACTGAGATCTTTGACT...AGGTCTATGGCTTCTACGATGAGTGCCTGCGCAAGTACGGCTCGGTGACTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563597.5
ENST00000563732.5
ENST00000566749.5
ENST00000627746.2
3UTR-3UTR GCA 90 bp CTTGCTTTCGGTCGATTGTCCGAATCTGATCCAGGGTCTGGATGGAGGGGGAGAAGTCAAAGATCTCAGTaGAGTAGCGCCACACAGTCA +
Preference number: 2 (lower is better)
Translates to: LAFGRLSESDPGSGWRGRSQRSQ*SSATQS
Trigger: TGACTGTGTGGCGCTACTGCACTGAGATCTTTGACT...TCTCCCCCTCCATCCAGACCCTGGATCAGATTCGGACAATCGACCGAAAGCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000563597.5
ENST00000563732.5
ENST00000566749.5
ENST00000627746.2
3UTR-3UTR CCA 90 bp AGGATAGCGAACCTTAAGTGCCAGCAGCAGGAGGAACGTTTCGACGCTATAGAAATCTGGCGACTCTCATaGTTGCCCCGGATCAGTGTG +
Preference number: 2 (lower is better)
Translates to: RIANLKCQQQEERFDAIEIWRLS*LPRISV
Trigger: CACACTGATCCGGGGCAACCATGAGAGTCGCCAGAT...TTCTATAGCGTCGAAACGTTCCTCCTGCTGCTGGCACTTAAGGTTCGCTATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563597.5
ENST00000563732.5
ENST00000627746.2
3UTR CAA 90 bp GAGCACCGTCTCATTGAAGTGCCACTTGTAACCTTCCATCACCAGTaGGTGGGCACGGCAGATCATGTCAATGTCATTGGCTGCGTTGAA +
Preference number: 2 (lower is better)
Translates to: EHRLIEVPLVTFHHQ*VGTADHVNVIGCVE
Trigger: TTCAACGCAGCCAATGACATTGACATGATCTGCCGTGCCCACCAACTGGTGATGGAAGGTTACAAGTGGCACTTCAATGAGACGGTGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566749.5
ENST00000627746.2
3UTR-3UTR CAA 90 bp CCCAGCCTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGAAGCCTCGAAGCACCCTCTaGGGGGACAGCAGAGCCAGG +
Preference number: 3 (lower is better)
Translates to: PSLRLRKMAESQWCEGQKPRSTL*GDSRAR
Trigger: CCTGGCTCTGCTGTCCCCCAAGAGGGTGCTTCGAGG...CTTCTGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAGGCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
3UTR-3UTR CAA 90 bp ACTGGGCCACCACGTCACTGCCAAATAGGTAGCCGGCTCCTCGGGGGCTCACGCTGCACGCAGAAGATCTaGCCATCGATGATGGCTGAC +
Preference number: 3 (lower is better)
Translates to: TGPPRHCQIGSRLLGGSRCTQKI*PSMMAD
Trigger: GTCAGCCATCATCGATGGCAAGATCTTCTGCGTGCA...GCGTGAGCCCCCGAGGAGCCGGCTACCTATTTGGCAGTGACGTGGTGGCCCAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000563732.5
ENST00000566749.5
ENST00000627746.2
3UTR-3UTR CAA 90 bp AGAGGAGGTCACACATGGGCCCATCATGAGGCACCTCTTGCTTTCGGTCGATTGCCTCGAAGCACCCTCTaGGGGGACAGCAGAGCCAGG +
Preference number: 3 (lower is better)
Translates to: RGGHTWAHHEAPLAFGRLPRSTL*GDSRAR
Trigger: CCTGGCTCTGCTGTCCCCCAAGAGGGTGCTTCGAGG...CAATCGACCGAAAGCAAGAGGTGCCTCATGATGGGCCCATGTGTGACCTCCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000566749.5
ENST00000627746.2
3UTR-3UTR CAA 90 bp GCCCATCATGAGGCACCTCTTGCTTTCGGTCGATTGTCCGAATCTGATCCAGGGCCTCGAAGCACCCTCTaGGGGGACAGCAGAGCCAGG +
Preference number: 3 (lower is better)
Translates to: AHHEAPLAFGRLSESDPGPRSTL*GDSRAR
Trigger: CCTGGCTCTGCTGTCCCCCAAGAGGGTGCTTCGAGG...CCCTGGATCAGATTCGGACAATCGACCGAAAGCAAGAGGTGCCTCATGATGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000566749.5
ENST00000627746.2
3UTR-3UTR CAA 90 bp CCTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGAAGGGTTGGATGCCCCGTGTCTCTaGGGGAGCAGCCTCAAAGAT +
Preference number: 3 (lower is better)
Translates to: PPSEEDGRVTVVRGPEGLDAPCL*GSSLKD
Trigger: ATCTTTGAGGCTGCTCCCCAAGAGACACGGGGCATC...CAACCCTTCTGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566749.5
ENST00000627746.2
3UTR GCA 72 bp CAGTGCAGTAGCGCCACACAGTCACCGAGCCGTACTTaGGCAGGCACTCATCGTAGAAGCCATAGACCTGCG +
Preference number: 3 (lower is better)
Translates to: QCSSATQSPSRT*AGTHRRSHRPA
Trigger: CGCAGGTCTATGGCTTCTACGATGAGTGCCTGCGCAAGTACGGCTCGGTGACTGTGTGGCGCTACTGCACTG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563597.5
ENST00000563732.5
ENST00000566749.5
ENST00000627746.2
3UTR CCA 72 bp TTCGGTCGATTGTCCGAATCTGATCCAGGGTCTGGATaGAGGGGGAGAGGCCCCCGTGCACGCAGAAGATCT +
Preference number: 3 (lower is better)
Translates to: FGRLSESDPGSG*RGRGPRARRRS
Trigger: AGATCTTCTGCGTGCACGGGGGCCTCTCCCCCTCCATCCAGACCCTGGATCAGATTCGGACAATCGACCGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000563597.5
ENST00000563732.5
ENST00000566749.5
ENST00000627746.2
3UTR-3UTR CAA 90 bp GCGCCACACAGTCACCGAGCCGTACTTGCGCAGGCACTCATCGTAGAAGCCATATGGCGACTCTCATGGTaGCCCCGGATCAGTGTGATG +
Preference number: 3 (lower is better)
Translates to: APHSHRAVLAQALIVEAIWRLSW*PRISVM
Trigger: CATCACACTGATCCGGGGCAACCATGAGAGTCGCCA...TATGGCTTCTACGATGAGTGCCTGCGCAAGTACGGCTCGGTGACTGTGTGGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563597.5
ENST00000563732.5
ENST00000566749.5
ENST00000627746.2
3UTR-3UTR CAA 90 bp ACAGGAAGTAGTCGGCCACGGGCTTCTTGGAGGGGATGCCCCGTGTCTCTTGGGATCATGTCAATGTCATaGGCTGCGTTGAACTGGGCC +
Preference number: 3 (lower is better)
Translates to: TGSSRPRASWRGCPVSLGIMSMS*AALNWA
Trigger: GGCCCAGTTCAACGCAGCCAATGACATTGACATGAT...CCCAAGAGACACGGGGCATCCCCTCCAAGAAGCCCGTGGCCGACTACTTCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566749.5
ENST00000627746.2
3UTR GCA 72 bp GGCTGCCACATTCCCACAGCGGTAGCAGTAGTTGGGTaGCGACCACACAGTGAGCACCGTCTCATTGAAGTG +
Preference number: 3 (lower is better)
Translates to: GCHIPTAVAVVG*RPHSEHRLIEV
Trigger: CACTTCAATGAGACGGTGCTCACTGTGTGGTCGGCACCCAACTACTGCTACCGCTGTGGGAATGTGGCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566749.5
ENST00000627746.2
3UTR-3UTR CAA 90 bp CAAAGATCTCAGTGCAGTAGCGCCACACAGTCACCGAGCCGTACTTGCGCAGGCTGCACGCAGAAGATCTaGCCATCGATGATGGCTGAC +
Preference number: 3 (lower is better)
Translates to: QRSQCSSATQSPSRTCAGCTQKI*PSMMAD
Trigger: GTCAGCCATCATCGATGGCAAGATCTTCTGCGTGCA...GCCTGCGCAAGTACGGCTCGGTGACTGTGTGGCGCTACTGCACTGAGATCTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563597.5
ENST00000563732.5
ENST00000566749.5
ENST00000627746.2
3UTR CCA 72 bp GCCACGGGCTTCTTGGAGGGGATGCCCCGTGTCTCTTaGGGAGCAGCCTCAAAGATGATGAAATCTTTCTGG +
Preference number: 3 (lower is better)
Translates to: ATGFLEGMPRVS*GAASKMMKSFW
Trigger: CCAGAAAGATTTCATCATCTTTGAGGCTGCTCCCCAAGAGACACGGGGCATCCCCTCCAAGAAGCCCGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566749.5
ENST00000627746.2
3UTR-3UTR CAA 90 bp GAGGTCACACATGGGCCCATCATGAGGCACCTCTTGCTTTCGGTCGATTGTCCGTGCACGCAGAAGATCTaGCCATCGATGATGGCTGAC +
Preference number: 3 (lower is better)
Translates to: EVTHGPIMRHLLLSVDCPCTQKI*PSMMAD
Trigger: GTCAGCCATCATCGATGGCAAGATCTTCTGCGTGCA...CGGACAATCGACCGAAAGCAAGAGGTGCCTCATGATGGGCCCATGTGTGACCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563597.5
ENST00000563732.5
ENST00000566749.5
ENST00000627746.2
3UTR-3UTR CAA 90 bp GTGGGCACGGCAGATCATGTCAATGTCATTGGCTGCGTTGAACTGGGCCACCACCTTGCTTTCGGTCGATaGTCCGAATCTGATCCAGGG +
Preference number: 3 (lower is better)
Translates to: VGTADHVNVIGCVELGHHLAFGR*SESDPG
Trigger: CCCTGGATCAGATTCGGACAATCGACCGAAAGCAAG...GTGGTGGCCCAGTTCAACGCAGCCAATGACATTGACATGATCTGCCGTGCCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563732.5
ENST00000566749.5
ENST00000627746.2
3UTR-3UTR CAA 90 bp TGGGCACGGCAGATCATGTCAATGTCATTGGCTGCGTTGAACTGGGCCACCACGATCATGAGGCACCTCTaGCTTTCGGTCGATTGTCCG +
Preference number: 3 (lower is better)
Translates to: WARQIMSMSLAALNWATTIMRHL*LSVDCP
Trigger: CGGACAATCGACCGAAAGCAAGAGGTGCCTCATGAT...CGTGGTGGCCCAGTTCAACGCAGCCAATGACATTGACATGATCTGCCGTGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563732.5
ENST00000566749.5
ENST00000627746.2
3UTR-3UTR CAA 90 bp TGGATGGAGGGGGAGAGGCCCCCGTGCACGCAGAAGATCTTGCCATCGATGATGTTTGAGGTCATAGAATaGTCCATGGATGTCGCCGCA +
Preference number: 3 (lower is better)
Translates to: WMEGERPPCTQKILPSMMFEVIE*SMDVAA
Trigger: TGCGGCGACATCCATGGACAATTCTATGACCTCAAA...CATCATCGATGGCAAGATCTTCTGCGTGCACGGGGGCCTCTCCCCCTCCATCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000563597.5
3UTR TCA 72 bp GGGCACGGCAGATCATGTCAATGTCATTGGCTGCGTTaGACTGGGCCACCACGTCACTGCCAAATAGGTAGC +
Preference number: 3 (lower is better)
Translates to: GHGRSCQCHWLR*TGPPRHCQIGS
Trigger: GCTACCTATTTGGCAGTGACGTGGTGGCCCAGTTCAACGCAGCCAATGACATTGACATGATCTGCCGTGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563732.5
ENST00000566749.5
ENST00000627746.2
3UTR GCA 72 bp ATCTTTCTGGAGATGCTCGTCCAGCTCCAAGATGGCTaGCACATTCCCACAGCGGTAGCAGTAGTTGGGTGC +
Preference number: 3 (lower is better)
Translates to: IFLEMLVQLQDG*HIPTAVAVVGC
Trigger: GCACCCAACTACTGCTACCGCTGTGGGAATGTGGCAGCCATCTTGGAGCTGGACGAGCATCTCCAGAAAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566749.5
ENST00000627746.2
3UTR-3UTR CAA 90 bp AGGATAGCGAACCTTAAGTGCCAGCAGCAGGAGGAACGTTTCGACGCTATAGAATGGCGACTCTCATGGTaGCCCCGGATCAGTGTGATG +
Preference number: 3 (lower is better)
Translates to: RIANLKCQQQEERFDAIEWRLSW*PRISVM
Trigger: CATCACACTGATCCGGGGCAACCATGAGAGTCGCCA...TTCTATAGCGTCGAAACGTTCCTCCTGCTGCTGGCACTTAAGGTTCGCTATCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563597.5
ENST00000563732.5
ENST00000627746.2
3UTR-3UTR CAA 90 bp ACACATGGGCCCATCATGAGGCACCTCTTGCTTTCGGTCGATTGTCCGAATCTGCTTGCTTTCGGTCGATaGTCCGAATCTGATCCAGGG +
Preference number: 3 (lower is better)
Translates to: THGPIMRHLLLSVDCPNLLAFGR*SESDPG
Trigger: CCCTGGATCAGATTCGGACAATCGACCGAAAGCAAG...CAGATTCGGACAATCGACCGAAAGCAAGAGGTGCCTCATGATGGGCCCATGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563597.5
ENST00000563732.5
ENST00000566749.5
ENST00000627746.2
3UTR-3UTR CAA 90 bp AACCTTCCATCACCAGTTGGTGGGCACGGCAGATCATGTCAATGTCATTGGCTGATGTCATTGGCTGCGTaGAACTGGGCCACCACGTCA +
Preference number: 3 (lower is better)
Translates to: NLPSPVGGHGRSCQCHWLMSLAA*NWATTS
Trigger: TGACGTGGTGGCCCAGTTCAACGCAGCCAATGACAT...CAGCCAATGACATTGACATGATCTGCCGTGCCCACCAACTGGTGATGGAAGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566749.5
ENST00000627746.2
3UTR TCA 72 bp CCCGTGCACGCAGAAGATCTTGCCATCGATGATGGCTaGCAGGCTGAGGTAGTCAAAGATCTCAGTGCAGTA +
Preference number: 3 (lower is better)
Translates to: PVHAEDLAIDDG*QAEVVKDLSAV
Trigger: TACTGCACTGAGATCTTTGACTACCTCAGCCTGTCAGCCATCATCGATGGCAAGATCTTCTGCGTGCACGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563597.5
ENST00000563732.5
ENST00000566749.5
ENST00000627746.2
3UTR-3UTR CAA 90 bp GTAACCTTCCATCACCAGTTGGTGGGCACGGCAGATCATGTCAATGTCATTGGCATCATGAGGCACCTCTaGCTTTCGGTCGATTGTCCG +
Preference number: 3 (lower is better)
Translates to: VTFHHQLVGTADHVNVIGIMRHL*LSVDCP
Trigger: CGGACAATCGACCGAAAGCAAGAGGTGCCTCATGAT...GCCAATGACATTGACATGATCTGCCGTGCCCACCAACTGGTGATGGAAGGTTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566749.5
ENST00000627746.2
3UTR GCA 72 bp GGAGCAGCCTCAAAGATGATGAAATCTTTCTGGAGATaGTCGTCCAGCTCCAAGATGGCTGCCACATTCCCA +
Preference number: 3 (lower is better)
Translates to: GAASKMMKSFWR*SSSSKMAATFP
Trigger: TGGGAATGTGGCAGCCATCTTGGAGCTGGACGAGCATCTCCAGAAAGATTTCATCATCTTTGAGGCTGCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CCA 90 bp CACGCCCAGCCTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGAGGGCCAGAAGGGTTaGAGGGGGCAGGGGCCGGGC +
Preference number: 4 (lower is better)
Translates to: HAQPPSEEDGRVTVVRGPEGQKG*RGQGPG
Trigger: GCCCGGCCCCTGCCCCCTCCAACCCTTCTGGCCCTC...TGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAGGCTGGGCGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS-3UTR GCA 90 bp CCACCACGTCACTGCCAAATAGGTAGCCGGCTCCTCGGGGGCTCACGCCCCAGCGGCTCTCCGGCTCCCTaGCTCCCTCTTTCACTCCGC +
Preference number: 4 (lower is better)
Translates to: PPRHCQIGSRLLGGSRPSGSPAP*LPLSLR
Trigger: GCGGAGTGAAAGAGGGAGGCAGGGAGCCGGAGAGCC...GCTGGGGCGTGAGCCCCCGAGGAGCCGGCTACCTATTTGGCAGTGACGTGGTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000563732.5
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CCA 90 bp ACTGGGCCACCACGTCACTGCCAAATAGGTAGCCGGCTCCTCGGGGGCTCACGCCGAGGTCGCCCAGGTTaGGGGTGCAGAAGCCGGGGA +
Preference number: 4 (lower is better)
Translates to: TGPPRHCQIGSRLLGGSRRGRPG*GCRSRG
Trigger: TCCCCGGCTTCTGCACCCCCAACCTGGGCGACCTCG...GCGTGAGCCCCCGAGGAGCCGGCTACCTATTTGGCAGTGACGTGGTGGCCCAGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000566749.5
CDS-3UTR TCA 90 bp CCCAGCCTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGAAGGCCGGTCCAGGTCGCTaGTCTCCGCCATGGCCCACC +
Preference number: 4 (lower is better)
Translates to: PSLRLRKMAESQWCEGQKAGPGR*SPPWPT
Trigger: GGTGGGCCATGGCGGAGATCAGCGACCTGGACCGGC...CTTCTGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAGGCTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS-3UTR TCA 90 bp GAGGGGGAGAGGCCCCCGTGCACGCAGAAGATCTTGCCATCGATGATGGCTGACGCCGGTCCAGGTCGCTaGTCTCCGCCATGGCCCACC +
Preference number: 4 (lower is better)
Translates to: EGERPPCTQKILPSMMADAGPGR*SPPWPT
Trigger: GGTGGGCCATGGCGGAGATCAGCGACCTGGACCGGC...GTCAGCCATCATCGATGGCAAGATCTTCTGCGTGCACGGGGGCCTCTCCCCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000563597.5
ENST00000563732.5
ENST00000566749.5
ENST00000627746.2
CDS-3UTR GCA 90 bp CCCACGCCCAGCCTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCGGCTCTCCGGCTCCCTaGCTCCCTCTTTCACTCCGC +
Preference number: 4 (lower is better)
Translates to: PTPSLRLRKMAESQWCEGGSPAP*LPLSLR
Trigger: GCGGAGTGAAAGAGGGAGGCAGGGAGCCGGAGAGCC...GCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAGGCTGGGCGTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279387.12
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CCA 90 bp ACTGGGCCACCACGTCACTGCCAAATAGGTAGCCGGCTCCTCGGGGGCTCACGCCGGCCACGGGCTTCTTaGAGGGGATGCCCCGTGTCT +
Preference number: 4 (lower is better)
Translates to: TGPPRHCQIGSRLLGGSRRPRAS*RGCPVS
Trigger: AGACACGGGGCATCCCCTCCAAGAAGCCCGTGGCCG...GCGTGAGCCCCCGAGGAGCCGGCTACCTATTTGGCAGTGACGTGGTGGCCCAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CCA 90 bp CTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGAAGGGTTGGGAGGGCCAGAAGGGTTaGAGGGGGCAGGGGCCGGGC +
Preference number: 4 (lower is better)
Translates to: LRLRKMAESQWCEGQKGWEGQKG*RGQGPG
Trigger: GCCCGGCCCCTGCCCCCTCCAACCCTTCTGGCCCTC...CCAACCCTTCTGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS-3UTR TCA 90 bp CTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGAAGGGTTGGGCCGGTCCAGGTCGCTaGTCTCCGCCATGGCCCACC +
Preference number: 4 (lower is better)
Translates to: LRLRKMAESQWCEGQKGWAGPGR*SPPWPT
Trigger: GGTGGGCCATGGCGGAGATCAGCGACCTGGACCGGC...CCAACCCTTCTGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS-3UTR TCA 90 bp TTCGGTCGATTGTCCGAATCTGATCCAGGGTCTGGATGGAGGGGGAGAGGCCCCGCCGGTCCAGGTCGCTaGTCTCCGCCATGGCCCACC +
Preference number: 4 (lower is better)
Translates to: FGRLSESDPGSGWRGRGPAGPGR*SPPWPT
Trigger: GGTGGGCCATGGCGGAGATCAGCGACCTGGACCGGC...GGGGCCTCTCCCCCTCCATCCAGACCCTGGATCAGATTCGGACAATCGACCGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000563597.5
ENST00000563732.5
ENST00000566749.5
ENST00000627746.2
CDS-3UTR TCA 90 bp CCCACGCCCAGCCTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCGCCCAGCCTCCGTCTaGGGAAGATGGCAGAGTCAC +
Preference number: 4 (lower is better)
Translates to: PTPSLRLRKMAESQWCEGRPASV*GRWQSH
Trigger: GTGACTCTGCCATCTTCCTCAGACGGAGGCTGGGCG...GCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAGGCTGGGCGTGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS-3UTR GCA 90 bp CACGCCCAGCCTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGGCTCTCCGGCTCCCTaGCTCCCTCTTTCACTCCGC +
Preference number: 4 (lower is better)
Translates to: HAQPPSEEDGRVTVVRGPGSPAP*LPLSLR
Trigger: GCGGAGTGAAAGAGGGAGGCAGGGAGCCGGAGAGCC...TGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAGGCTGGGCGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279387.12
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CCA 90 bp CACGCCCAGCCTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGATCCAGGGTCTGGATaGAGGGGGAGAGGCCCCCGT +
Preference number: 4 (lower is better)
Translates to: HAQPPSEEDGRVTVVRGPDPGSG*RGRGPR
Trigger: ACGGGGGCCTCTCCCCCTCCATCCAGACCCTGGATC...TGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAGGCTGGGCGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CCA 90 bp CACGCCCAGCCTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCACGGCCACGGGCTTCTTaGAGGGGATGCCCCGTGTCT +
Preference number: 4 (lower is better)
Translates to: HAQPPSEEDGRVTVVRGPRPRAS*RGCPVS
Trigger: AGACACGGGGCATCCCCTCCAAGAAGCCCGTGGCCG...TGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAGGCTGGGCGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS-3UTR GCA 90 bp GAGGGGGAGAGGCCCCCGTGCACGCAGAAGATCTTGCCATCGATGATGGCTGACGGCTCTCCGGCTCCCTaGCTCCCTCTTTCACTCCGC +
Preference number: 4 (lower is better)
Translates to: EGERPPCTQKILPSMMADGSPAP*LPLSLR
Trigger: GCGGAGTGAAAGAGGGAGGCAGGGAGCCGGAGAGCC...GTCAGCCATCATCGATGGCAAGATCTTCTGCGTGCACGGGGGCCTCTCCCCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000563597.5
ENST00000563732.5
ENST00000566749.5
ENST00000627746.2
CDS-3UTR GCA 90 bp AGCCTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGAAGGGTAGGGGTCTCCGCCGCTaGGACTCCGGTTCCGGCTCT +
Preference number: 4 (lower is better)
Translates to: SLRLRKMAESQWCEGQKGRGLRR*DSGSGS
Trigger: AGAGCCGGAACCGGAGTCGCAGCGGCGGAGACCCCT...ACCCTTCTGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279387.12
ENST00000566749.5
ENST00000627746.2
CDS-3UTR GCA 90 bp CACGCCCAGCCTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCACGCAGCTGCTCGATCTaGCGGTCCAGGTCGCTGATC +
Preference number: 4 (lower is better)
Translates to: HAQPPSEEDGRVTVVRGPRSCSI*RSRSLI
Trigger: GATCAGCGACCTGGACCGGCAGATCGAGCAGCTGCG...TGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAGGCTGGGCGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS-3UTR GCA 90 bp CCCACGCCCAGCCTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCGGGCCACCACGTCACTaGCAAATAGGTAGCCGGCTC +
Preference number: 4 (lower is better)
Translates to: PTPSLRLRKMAESQWCEGGPPRH*QIGSRL
Trigger: GAGCCGGCTACCTATTTGGCAGTGACGTGGTGGCCC...GCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAGGCTGGGCGTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CCA 90 bp CACGCCCAGCCTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGCCGCACACTGTGACTaGCGAGTCCACCCTCTGCAC +
Preference number: 4 (lower is better)
Translates to: HAQPPSEEDGRVTVVRGPAAHCD*RVHPLH
Trigger: GTGCAGAGGGTGGACTCGCCAGTCACAGTGTGCGGC...TGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAGGCTGGGCGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
CDS-3UTR CCA 90 bp CCCAGCCTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGAAGCGGCCACGGGCTTCTTaGAGGGGATGCCCCGTGTCT +
Preference number: 4 (lower is better)
Translates to: PSLRLRKMAESQWCEGQKRPRAS*RGCPVS
Trigger: AGACACGGGGCATCCCCTCCAAGAAGCCCGTGGCCG...CTTCTGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAGGCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CCA 90 bp CCCACGCCCAGCCTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCTCGAAGCACCCTCTTaGGGGACAGCAGAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: PTPSLRLRKMAESQWCEGLEAPS*GTAEPG
Trigger: TCCTGGCTCTGCTGTCCCCCAAGAGGGTGCTTCGAG...GCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAGGCTGGGCGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS-3UTR TCA 90 bp ACAGGAAGTAGTCGGCCACGGGCTTCTTGGAGGGGATGCCCCGTGTCTCTTGGGCGCCCAGCCTCCGTCTaGGGAAGATGGCAGAGTCAC +
Preference number: 4 (lower is better)
Translates to: TGSSRPRASWRGCPVSLGRPASV*GRWQSH
Trigger: GTGACTCTGCCATCTTCCTCAGACGGAGGCTGGGCG...CCCAAGAGACACGGGGCATCCCCTCCAAGAAGCCCGTGGCCGACTACTTCCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566749.5
ENST00000627746.2
CDS-3UTR GCA 90 bp GCAGTAGCGCCACACAGTCACCGAGCCGTACTTGCGCAGGCACTCATCGTAGAAAGGGGTCTCCGCCGCTaGGACTCCGGTTCCGGCTCT +
Preference number: 4 (lower is better)
Translates to: AVAPHSHRAVLAQALIVERGLRR*DSGSGS
Trigger: AGAGCCGGAACCGGAGTCGCAGCGGCGGAGACCCCT...TTCTACGATGAGTGCCTGCGCAAGTACGGCTCGGTGACTGTGTGGCGCTACTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563597.5
ENST00000563732.5
ENST00000566749.5
ENST00000627746.2
CDS-3UTR GCA 90 bp CCCAGCCTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGAAGCGCAGCTGCTCGATCTaGCGGTCCAGGTCGCTGATC +
Preference number: 4 (lower is better)
Translates to: PSLRLRKMAESQWCEGQKRSCSI*RSRSLI
Trigger: GATCAGCGACCTGGACCGGCAGATCGAGCAGCTGCG...CTTCTGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAGGCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS-3UTR GCA 90 bp CTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGAAGGGTTGGTCGCAGCGACGCAGCTaGTCGATCTGCCGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: LRLRKMAESQWCEGQKGWSQRRS*SICRSR
Trigger: CCTGGACCGGCAGATCGAGCAGCTGCGTCGCTGCGA...CCAACCCTTCTGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS-3UTR GCA 90 bp AGCCTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGAAGGGTTCGCAGCGACGCAGCTaGTCGATCTGCCGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: SLRLRKMAESQWCEGQKGSQRRS*SICRSR
Trigger: CCTGGACCGGCAGATCGAGCAGCTGCGTCGCTGCGA...ACCCTTCTGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS-3UTR GCA 90 bp TCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGAAGGGTTGGAGGGGTCGCAGCGACGCAGCTaGTCGATCTGCCGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: SEEDGRVTVVRGPEGLEGSQRRS*SICRSR
Trigger: CCTGGACCGGCAGATCGAGCAGCTGCGTCGCTGCGA...CCCCTCCAACCCTTCTGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CCA 90 bp CCCAGCCTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGAAGGCCGCACACTGTGACTaGCGAGTCCACCCTCTGCAC +
Preference number: 4 (lower is better)
Translates to: PSLRLRKMAESQWCEGQKAAHCD*RVHPLH
Trigger: GTGCAGAGGGTGGACTCGCCAGTCACAGTGTGCGGC...CTTCTGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAGGCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
CDS-3UTR CCA 90 bp AGCCTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGAAGGGTGATCCAGGGTCTGGATaGAGGGGGAGAGGCCCCCGT +
Preference number: 4 (lower is better)
Translates to: SLRLRKMAESQWCEGQKGDPGSG*RGRGPR
Trigger: ACGGGGGCCTCTCCCCCTCCATCCAGACCCTGGATC...ACCCTTCTGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CCA 90 bp CACGCCCAGCCTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCATCACGCCCCAGCCTGTaGTGTCTTCTGGGTCAGACC +
Preference number: 4 (lower is better)
Translates to: HAQPPSEEDGRVTVVRGPSRPSL*CLLGQT
Trigger: GGTCTGACCCAGAAGACACCACAGGCTGGGGCGTGA...TGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAGGCTGGGCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CCA 90 bp CCCACGCCCAGCCTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCATGGCAGAGTCACAGTaGTGCGAGGGCCAGAAGGGT +
Preference number: 4 (lower is better)
Translates to: PTPSLRLRKMAESQWCEGMAESQ*CEGQKG
Trigger: ACCCTTCTGGCCCTCGCACCACTGTGACTCTGCCAT...GCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAGGCTGGGCGTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS-3UTR TCA 90 bp AGCCTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGAAGGGTTGTCGCCGCACACTGTaGCTGGCGAGTCCACCCTCT +
Preference number: 4 (lower is better)
Translates to: SLRLRKMAESQWCEGQKGCRRTL*LASPPS
Trigger: AGAGGGTGGACTCGCCAGTCACAGTGTGCGGCGACA...ACCCTTCTGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
CDS-3UTR TCA 90 bp CTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGAAGGGTTGGTGTCGCCGCACACTGTaGCTGGCGAGTCCACCCTCT +
Preference number: 4 (lower is better)
Translates to: LRLRKMAESQWCEGQKGWCRRTL*LASPPS
Trigger: AGAGGGTGGACTCGCCAGTCACAGTGTGCGGCGACA...CCAACCCTTCTGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
CDS-3UTR TCA 90 bp CACGCCCAGCCTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCACACATGGGCCCATCATaGGGCACCTCTTGCTTTCGG +
Preference number: 4 (lower is better)
Translates to: HAQPPSEEDGRVTVVRGPHMGPS*GTSCFR
Trigger: CCGAAAGCAAGAGGTGCCTCATGATGGGCCCATGTG...TGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAGGCTGGGCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS-3UTR TCA 90 bp CACGCCCAGCCTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCATGTCATTGGCTGCGTTaGACTGGGCCACCACGTCAC +
Preference number: 4 (lower is better)
Translates to: HAQPPSEEDGRVTVVRGPCHWLR*TGPPRH
Trigger: GTGACGTGGTGGCCCAGTTCAACGCAGCCAATGACA...TGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAGGCTGGGCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS-3UTR TCA 90 bp AGCCTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGAAGGGTCGCCCAGCCTCCGTCTaGGGAAGATGGCAGAGTCAC +
Preference number: 4 (lower is better)
Translates to: SLRLRKMAESQWCEGQKGRPASV*GRWQSH
Trigger: GTGACTCTGCCATCTTCCTCAGACGGAGGCTGGGCG...ACCCTTCTGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS-3UTR GCA 90 bp TGGGCACGGCAGATCATGTCAATGTCATTGGCTGCGTTGAACTGGGCCACCACGAGGGGTCTCCGCCGCTaGGACTCCGGTTCCGGCTCT +
Preference number: 4 (lower is better)
Translates to: WARQIMSMSLAALNWATTRGLRR*DSGSGS
Trigger: AGAGCCGGAACCGGAGTCGCAGCGGCGGAGACCCCT...CGTGGTGGCCCAGTTCAACGCAGCCAATGACATTGACATGATCTGCCGTGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563732.5
ENST00000566749.5
ENST00000627746.2
CDS-3UTR GCA 90 bp CCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGAAGGGTTGGAGCGCAGCTGCTCGATCTaGCGGTCCAGGTCGCTGATC +
Preference number: 4 (lower is better)
Translates to: PSEEDGRVTVVRGPEGLERSCSI*RSRSLI
Trigger: GATCAGCGACCTGGACCGGCAGATCGAGCAGCTGCG...CTCCAACCCTTCTGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS-3UTR GCA 90 bp CCCAGCCTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGAAGGGCGAGTCCACCCTCTaGACGTTGCTCTCCTCTACC +
Preference number: 4 (lower is better)
Translates to: PSLRLRKMAESQWCEGQKGESTL*TLLSST
Trigger: GGTAGAGGAGAGCAACGTGCAGAGGGTGGACTCGCC...CTTCTGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAGGCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
CDS-3UTR GCA 90 bp ACTGGGCCACCACGTCACTGCCAAATAGGTAGCCGGCTCCTCGGGGGCTCACGCTCACCGAGCCGTACTTaGGCAGGCACTCATCGTAGA +
Preference number: 4 (lower is better)
Translates to: TGPPRHCQIGSRLLGGSRSPSRT*AGTHRR
Trigger: TCTACGATGAGTGCCTGCGCAAGTACGGCTCGGTGA...GCGTGAGCCCCCGAGGAGCCGGCTACCTATTTGGCAGTGACGTGGTGGCCCAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000563732.5
ENST00000566749.5
ENST00000627746.2
CDS-3UTR GCA 90 bp CCCACGCCCAGCCTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCTCACCGAGCCGTACTTaGGCAGGCACTCATCGTAGA +
Preference number: 4 (lower is better)
Translates to: PTPSLRLRKMAESQWCEGSPSRT*AGTHRR
Trigger: TCTACGATGAGTGCCTGCGCAAGTACGGCTCGGTGA...GCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAGGCTGGGCGTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS-3UTR GCA 90 bp TCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGAAGGGTTGGAGGGGGGGGAGAGGCCCCCGTaGACGCAGAAGATCTTGCCA +
Preference number: 4 (lower is better)
Translates to: SEEDGRVTVVRGPEGLEGGERPP*TQKILP
Trigger: TGGCAAGATCTTCTGCGTGCACGGGGGCCTCTCCCC...CCCCTCCAACCCTTCTGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGA
62% GC, longest homopolymer 8 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS-3UTR GCA 90 bp GAGGGGGAGAGGCCCCCGTGCACGCAGAAGATCTTGCCATCGATGATGGCTGACGGGCCACCACGTCACTaGCAAATAGGTAGCCGGCTC +
Preference number: 4 (lower is better)
Translates to: EGERPPCTQKILPSMMADGPPRH*QIGSRL
Trigger: GAGCCGGCTACCTATTTGGCAGTGACGTGGTGGCCC...GTCAGCCATCATCGATGGCAAGATCTTCTGCGTGCACGGGGGCCTCTCCCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000563732.5
ENST00000566749.5
ENST00000627746.2
CDS-3UTR GCA 90 bp GAGGGGGAGAGGCCCCCGTGCACGCAGAAGATCTTGCCATCGATGATGGCTGACGCTTCTTGGAGGGGATaGCCCGTGTCTCTTGGGGAG +
Preference number: 4 (lower is better)
Translates to: EGERPPCTQKILPSMMADASWRG*PVSLGE
Trigger: CTCCCCAAGAGACACGGGGCATCCCCTCCAAGAAGC...GTCAGCCATCATCGATGGCAAGATCTTCTGCGTGCACGGGGGCCTCTCCCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CCA 90 bp TGGATGGAGGGGGAGAGGCCCCCGTGCACGCAGAAGATCTTGCCATCGATGATGGCCGCACACTGTGACTaGCGAGTCCACCCTCTGCAC +
Preference number: 4 (lower is better)
Translates to: WMEGERPPCTQKILPSMMAAHCD*RVHPLH
Trigger: GTGCAGAGGGTGGACTCGCCAGTCACAGTGTGCGGC...CATCATCGATGGCAAGATCTTCTGCGTGCACGGGGGCCTCTCCCCCTCCATCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000563597.5
ENST00000566749.5
CDS-3UTR CCA 90 bp CACGCCCAGCCTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGCCTGTGGTGTCTTCTaGGTCAGACCAGAGGAGGTC +
Preference number: 4 (lower is better)
Translates to: HAQPPSEEDGRVTVVRGPACGVF*VRPEEV
Trigger: GACCTCCTCTGGTCTGACCCAGAAGACACCACAGGC...TGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAGGCTGGGCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CCA 90 bp CCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGAAGGGTTGGAGCGCACAGGGGTCTCCTaGGAAAGGCCAAGACGAGCC +
Preference number: 4 (lower is better)
Translates to: PSEEDGRVTVVRGPEGLERTGVS*ERPRRA
Trigger: GGCTCGTCTTGGCCTTTCCCAGGAGACCCCTGTGCG...CTCCAACCCTTCTGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561610.1
CDS-3UTR TCA 90 bp GAGGTAGTCAAAGATCTCAGTGCAGTAGCGCCACACAGTCACCGAGCCGTACTTGCCGGTCCAGGTCGCTaGTCTCCGCCATGGCCCACC +
Preference number: 4 (lower is better)
Translates to: EVVKDLSAVAPHSHRAVLAGPGR*SPPWPT
Trigger: GGTGGGCCATGGCGGAGATCAGCGACCTGGACCGGC...AAGTACGGCTCGGTGACTGTGTGGCGCTACTGCACTGAGATCTTTGACTACCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563597.5
ENST00000563732.5
ENST00000566749.5
ENST00000627746.2
CDS-3UTR TCA 90 bp CCCACGCCCAGCCTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCGCCATCGATGATGGCTaGCAGGCTGAGGTAGTCAAA +
Preference number: 4 (lower is better)
Translates to: PTPSLRLRKMAESQWCEGAIDDG*QAEVVK
Trigger: TTTGACTACCTCAGCCTGTCAGCCATCATCGATGGC...GCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAGGCTGGGCGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS-3UTR GCA 90 bp AGAGGAGGTCACACATGGGCCCATCATGAGGCACCTCTTGCTTTCGGTCGATTGAGGGGTCTCCGCCGCTaGGACTCCGGTTCCGGCTCT +
Preference number: 4 (lower is better)
Translates to: RGGHTWAHHEAPLAFGRLRGLRR*DSGSGS
Trigger: AGAGCCGGAACCGGAGTCGCAGCGGCGGAGACCCCT...CAATCGACCGAAAGCAAGAGGTGCCTCATGATGGGCCCATGTGTGACCTCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563597.5
ENST00000563732.5
ENST00000566749.5
ENST00000627746.2
CDS-3UTR GCA 90 bp ACACAGTCACCGAGCCGTACTTGCGCAGGCACTCATCGTAGAAGCCATAGACCTAGGGGTCTCCGCCGCTaGGACTCCGGTTCCGGCTCT +
Preference number: 4 (lower is better)
Translates to: TQSPSRTCAGTHRRSHRPRGLRR*DSGSGS
Trigger: AGAGCCGGAACCGGAGTCGCAGCGGCGGAGACCCCT...AGGTCTATGGCTTCTACGATGAGTGCCTGCGCAAGTACGGCTCGGTGACTGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563597.5
ENST00000563732.5
ENST00000566749.5
ENST00000627746.2
CDS-3UTR GCA 90 bp CCTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGAAGGGTTGGGCGAGTCCACCCTCTaGACGTTGCTCTCCTCTACC +
Preference number: 4 (lower is better)
Translates to: PPSEEDGRVTVVRGPEGLGESTL*TLLSST
Trigger: GGTAGAGGAGAGCAACGTGCAGAGGGTGGACTCGCC...CAACCCTTCTGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
CDS-3UTR GCA 90 bp TCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGAAGGGTTGGAGGGGGGGCCACCACGTCACTaGCAAATAGGTAGCCGGCTC +
Preference number: 4 (lower is better)
Translates to: SEEDGRVTVVRGPEGLEGGPPRH*QIGSRL
Trigger: GAGCCGGCTACCTATTTGGCAGTGACGTGGTGGCCC...CCCCTCCAACCCTTCTGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGA
61% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS-3UTR GCA 90 bp TTCGGTCGATTGTCCGAATCTGATCCAGGGTCTGGATGGAGGGGGAGAGGCCCCGGGCCACCACGTCACTaGCAAATAGGTAGCCGGCTC +
Preference number: 4 (lower is better)
Translates to: FGRLSESDPGSGWRGRGPGPPRH*QIGSRL
Trigger: GAGCCGGCTACCTATTTGGCAGTGACGTGGTGGCCC...GGGGCCTCTCCCCCTCCATCCAGACCCTGGATCAGATTCGGACAATCGACCGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000563732.5
ENST00000566749.5
ENST00000627746.2
CDS-3UTR GCA 90 bp CCCACGCCCAGCCTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCGTCAATGTCATTGGCTaGGTTGAACTGGGCCACCAC +
Preference number: 4 (lower is better)
Translates to: PTPSLRLRKMAESQWCEGVNVIG*VELGHH
Trigger: GTGGTGGCCCAGTTCAACGCAGCCAATGACATTGAC...GCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAGGCTGGGCGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS-3UTR GCA 90 bp CCTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGAAGGGTTGGCTTCTTGGAGGGGATaGCCCGTGTCTCTTGGGGAG +
Preference number: 4 (lower is better)
Translates to: PPSEEDGRVTVVRGPEGLASWRG*PVSLGE
Trigger: CTCCCCAAGAGACACGGGGCATCCCCTCCAAGAAGC...CAACCCTTCTGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS-3UTR GCA 90 bp TCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGAAGGGTTGGAGGGGGCTTCTTGGAGGGGATaGCCCGTGTCTCTTGGGGAG +
Preference number: 4 (lower is better)
Translates to: SEEDGRVTVVRGPEGLEGASWRG*PVSLGE
Trigger: CTCCCCAAGAGACACGGGGCATCCCCTCCAAGAAGC...CCCCTCCAACCCTTCTGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS-3UTR GCA 90 bp CCTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGAAGGGTTGGCAGAGTCACAGTGGTaGGAGGGCCAGAAGGGTTGG +
Preference number: 4 (lower is better)
Translates to: PPSEEDGRVTVVRGPEGLAESQW*EGQKGW
Trigger: CCAACCCTTCTGGCCCTCGCACCACTGTGACTCTGC...CAACCCTTCTGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS-3UTR GCA 90 bp CCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGAAGGGTTGGAGGCAGAAGCCGGGGACTaGCACCTTAAGTGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: PSEEDGRVTVVRGPEGLEAEAGD*HLKCQQ
Trigger: CTGCTGGCACTTAAGGTGGCAGTCCCCGGCTTCTGC...CTCCAACCCTTCTGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566749.5
CDS-3UTR GCA 90 bp ACACAGTCACCGAGCCGTACTTGCGCAGGCACTCATCGTAGAAGCCATAGACCTCGCCCAGGTTGGGGGTaGAGAAGCCGGGGACTGCCA +
Preference number: 4 (lower is better)
Translates to: TQSPSRTCAGTHRRSHRPRPGWG*RSRGLP
Trigger: TGGCAGTCCCCGGCTTCTGCACCCCCAACCTGGGCG...AGGTCTATGGCTTCTACGATGAGTGCCTGCGCAAGTACGGCTCGGTGACTGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566749.5
CDS-3UTR CCA 90 bp CCACACAGTCACCGAGCCGTACTTGCGCAGGCACTCATCGTAGAAGCCATAGACGATCCAGGGTCTGGATaGAGGGGGAGAGGCCCCCGT +
Preference number: 4 (lower is better)
Translates to: PHSHRAVLAQALIVEAIDDPGSG*RGRGPR
Trigger: ACGGGGGCCTCTCCCCCTCCATCCAGACCCTGGATC...GTCTATGGCTTCTACGATGAGTGCCTGCGCAAGTACGGCTCGGTGACTGTGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000563597.5
ENST00000563732.5
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CCA 90 bp AGCCTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGAAGGGTTCACGCCCCAGCCTGTaGTGTCTTCTGGGTCAGACC +
Preference number: 4 (lower is better)
Translates to: SLRLRKMAESQWCEGQKGSRPSL*CLLGQT
Trigger: GGTCTGACCCAGAAGACACCACAGGCTGGGGCGTGA...ACCCTTCTGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CCA 90 bp ACTGGGCCACCACGTCACTGCCAAATAGGTAGCCGGCTCCTCGGGGGCTCACGCTCCATCACCAGTTGGTaGGCACGGCAGATCATGTCA +
Preference number: 4 (lower is better)
Translates to: TGPPRHCQIGSRLLGGSRSITSW*ARQIMS
Trigger: TGACATGATCTGCCGTGCCCACCAACTGGTGATGGA...GCGTGAGCCCCCGAGGAGCCGGCTACCTATTTGGCAGTGACGTGGTGGCCCAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CCA 90 bp CCCAGCCTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGAAGCGTCCAGCTCCAAGATaGCTGCCACATTCCCACAGC +
Preference number: 4 (lower is better)
Translates to: PSLRLRKMAESQWCEGQKRPAPR*LPHSHS
Trigger: GCTGTGGGAATGTGGCAGCCATCTTGGAGCTGGACG...CTTCTGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAGGCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CCA 90 bp CACGCCCAGCCTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAATGCCCCGTGTCTCTTaGGGAGCAGCCTCAAAGATG +
Preference number: 4 (lower is better)
Translates to: HAQPPSEEDGRVTVVRGPMPRVS*GAASKM
Trigger: CATCTTTGAGGCTGCTCCCCAAGAGACACGGGGCAT...TGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAGGCTGGGCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CCA 90 bp TCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGAAGGGTTGGAGGGGCTCGAAGCACCCTCTTaGGGGACAGCAGAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: SEEDGRVTVVRGPEGLEGLEAPS*GTAEPG
Trigger: TCCTGGCTCTGCTGTCCCCCAAGAGGGTGCTTCGAG...CCCCTCCAACCCTTCTGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS-3UTR TCA 90 bp TGCGATCAGGATAGCGAACCAGTGACACAGCTCCAAGGTGGGGCTGGTCACGATTGTCGCCGCACACTGTaGCTGGCGAGTCCACCCTCT +
Preference number: 4 (lower is better)
Translates to: CDQDSEPVTQLQGGAGHDCRRTL*LASPPS
Trigger: AGAGGGTGGACTCGCCAGTCACAGTGTGCGGCGACA...ATCGTGACCAGCCCCACCTTGGAGCTGTGTCACTGGTTCGCTATCCTGATCGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566749.5
CDS-3UTR TCA 90 bp CCTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGAAGGGTTGCACATGGGCCCATCATaGGGCACCTCTTGCTTTCGG +
Preference number: 4 (lower is better)
Translates to: PPSEEDGRVTVVRGPEGLHMGPS*GTSCFR
Trigger: CCGAAAGCAAGAGGTGCCTCATGATGGGCCCATGTG...CAACCCTTCTGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS-3UTR TCA 90 bp AGCCTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGAAGGGTTGTCATTGGCTGCGTTaGACTGGGCCACCACGTCAC +
Preference number: 4 (lower is better)
Translates to: SLRLRKMAESQWCEGQKGCHWLR*TGPPRH
Trigger: GTGACGTGGTGGCCCAGTTCAACGCAGCCAATGACA...ACCCTTCTGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS-3UTR GCA 90 bp TTGGTGGGCACGGCAGATCATGTCAATGTCATTGGCTGCGTTGAACTGGGCCACGGCTCTCCGGCTCCCTaGCTCCCTCTTTCACTCCGC +
Preference number: 4 (lower is better)
Translates to: LVGTADHVNVIGCVELGHGSPAP*LPLSLR
Trigger: GCGGAGTGAAAGAGGGAGGCAGGGAGCCGGAGAGCC...GTGGCCCAGTTCAACGCAGCCAATGACATTGACATGATCTGCCGTGCCCACCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563732.5
ENST00000566749.5
ENST00000627746.2
CDS-3UTR GCA 90 bp CAAAGATCTCAGTGCAGTAGCGCCACACAGTCACCGAGCCGTACTTGCGCAGGCGGCGAGTCCACCCTCTaGACGTTGCTCTCCTCTACC +
Preference number: 4 (lower is better)
Translates to: QRSQCSSATQSPSRTCAGGESTL*TLLSST
Trigger: GGTAGAGGAGAGCAACGTGCAGAGGGTGGACTCGCC...GCCTGCGCAAGTACGGCTCGGTGACTGTGTGGCGCTACTGCACTGAGATCTTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563597.5
ENST00000566749.5
CDS-3UTR GCA 90 bp TGCGATCAGGATAGCGAACCAGTGACACAGCTCCAAGGTGGGGCTGGTCACGATGGGGAGAGGCCCCCGTaGACGCAGAAGATCTTGCCA +
Preference number: 4 (lower is better)
Translates to: CDQDSEPVTQLQGGAGHDGERPP*TQKILP
Trigger: TGGCAAGATCTTCTGCGTGCACGGGGGCCTCTCCCC...ATCGTGACCAGCCCCACCTTGGAGCTGTGTCACTGGTTCGCTATCCTGATCGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000566749.5
CDS-3UTR GCA 90 bp ATAGACCTGCGTGATCTGGCGACTCTCATGGTTGCCCCGGATCAGTGTGATGCGGGGGAGAGGCCCCCGTaGACGCAGAAGATCTTGCCA +
Preference number: 4 (lower is better)
Translates to: IDLRDLATLMVAPDQCDAGERPP*TQKILP
Trigger: TGGCAAGATCTTCTGCGTGCACGGGGGCCTCTCCCC...CGCATCACACTGATCCGGGGCAACCATGAGAGTCGCCAGATCACGCAGGTCTAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000563597.5
ENST00000563732.5
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CCA 90 bp ACACAGTCACCGAGCCGTACTTGCGCAGGCACTCATCGTAGAAGCCATAGACCTGATCCAGGGTCTGGATaGAGGGGGAGAGGCCCCCGT +
Preference number: 4 (lower is better)
Translates to: TQSPSRTCAGTHRRSHRPDPGSG*RGRGPR
Trigger: ACGGGGGCCTCTCCCCCTCCATCCAGACCCTGGATC...AGGTCTATGGCTTCTACGATGAGTGCCTGCGCAAGTACGGCTCGGTGACTGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000563597.5
ENST00000563732.5
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CCA 90 bp CTTGCTTTCGGTCGATTGTCCGAATCTGATCCAGGGTCTGGATGGAGGGGGAGAGATCCAGGGTCTGGATaGAGGGGGAGAGGCCCCCGT +
Preference number: 4 (lower is better)
Translates to: LAFGRLSESDPGSGWRGRDPGSG*RGRGPR
Trigger: ACGGGGGCCTCTCCCCCTCCATCCAGACCCTGGATC...TCTCCCCCTCCATCCAGACCCTGGATCAGATTCGGACAATCGACCGAAAGCAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000563597.5
ENST00000563732.5
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CCA 90 bp CCTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGAAGGGTTGGCCTGTGGTGTCTTCTaGGTCAGACCAGAGGAGGTC +
Preference number: 4 (lower is better)
Translates to: PPSEEDGRVTVVRGPEGLACGVF*VRPEEV
Trigger: GACCTCCTCTGGTCTGACCCAGAAGACACCACAGGC...CAACCCTTCTGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CCA 90 bp TCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGAAGGGTTGGAGGGGTTGGCTGCGTTGAACTaGGCCACCACGTCACTGCCA +
Preference number: 4 (lower is better)
Translates to: SEEDGRVTVVRGPEGLEGLAALN*ATTSLP
Trigger: TGGCAGTGACGTGGTGGCCCAGTTCAACGCAGCCAA...CCCCTCCAACCCTTCTGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CCA 90 bp CCTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGAAGGGTTGTTGGCTGCGTTGAACTaGGCCACCACGTCACTGCCA +
Preference number: 4 (lower is better)
Translates to: PPSEEDGRVTVVRGPEGLLAALN*ATTSLP
Trigger: TGGCAGTGACGTGGTGGCCCAGTTCAACGCAGCCAA...CAACCCTTCTGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CCA 90 bp CACGCCCAGCCTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCATCCATCACCAGTTGGTaGGCACGGCAGATCATGTCA +
Preference number: 4 (lower is better)
Translates to: HAQPPSEEDGRVTVVRGPSITSW*ARQIMS
Trigger: TGACATGATCTGCCGTGCCCACCAACTGGTGATGGA...TGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAGGCTGGGCGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CCA 90 bp CCCAGCCTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGAAGCCTTCCATCACCAGTTaGTGGGCACGGCAGATCATG +
Preference number: 4 (lower is better)
Translates to: PSLRLRKMAESQWCEGQKPSITS*WARQIM
Trigger: CATGATCTGCCGTGCCCACCAACTGGTGATGGAAGG...CTTCTGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAGGCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CCA 90 bp AGCCTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGAAGGGTCGTCCAGCTCCAAGATaGCTGCCACATTCCCACAGC +
Preference number: 4 (lower is better)
Translates to: SLRLRKMAESQWCEGQKGRPAPR*LPHSHS
Trigger: GCTGTGGGAATGTGGCAGCCATCTTGGAGCTGGACG...ACCCTTCTGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CCA 90 bp TTGGGGAGCAGCCTCAAAGATGATGAAATCTTTCTGGAGATGCTCGTCCAGCTCGAGGGCCAGAAGGGTTaGAGGGGGCAGGGGCCGGGC +
Preference number: 4 (lower is better)
Translates to: LGSSLKDDEIFLEMLVQLEGQKG*RGQGPG
Trigger: GCCCGGCCCCTGCCCCCTCCAACCCTTCTGGCCCTC...GAGCTGGACGAGCATCTCCAGAAAGATTTCATCATCTTTGAGGCTGCTCCCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CCA 90 bp TCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGAAGGGTTGGAGGGGATGGCAGAGTCACAGTaGTGCGAGGGCCAGAAGGGT +
Preference number: 4 (lower is better)
Translates to: SEEDGRVTVVRGPEGLEGMAESQ*CEGQKG
Trigger: ACCCTTCTGGCCCTCGCACCACTGTGACTCTGCCAT...CCCCTCCAACCCTTCTGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS-3UTR TCA 90 bp CCTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGAAGGGTTGTGCCCCGGATCAGTGTaGTGCGATCAGGATAGCGAA +
Preference number: 4 (lower is better)
Translates to: PPSEEDGRVTVVRGPEGLCPGSV*CDQDSE
Trigger: TTCGCTATCCTGATCGCATCACACTGATCCGGGGCA...CAACCCTTCTGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS-3UTR TCA 90 bp AGCCTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGAAGGGTTGCCCCGGATCAGTGTaGTGCGATCAGGATAGCGAA +
Preference number: 4 (lower is better)
Translates to: SLRLRKMAESQWCEGQKGCPGSV*CDQDSE
Trigger: TTCGCTATCCTGATCGCATCACACTGATCCGGGGCA...ACCCTTCTGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS-3UTR TCA 90 bp TTCGGTCGATTGTCCGAATCTGATCCAGGGTCTGGATGGAGGGGGAGAGGCCCCTGCCCCGGATCAGTGTaGTGCGATCAGGATAGCGAA +
Preference number: 4 (lower is better)
Translates to: FGRLSESDPGSGWRGRGPCPGSV*CDQDSE
Trigger: TTCGCTATCCTGATCGCATCACACTGATCCGGGGCA...GGGGCCTCTCCCCCTCCATCCAGACCCTGGATCAGATTCGGACAATCGACCGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000563597.5
ENST00000563732.5
ENST00000566749.5
ENST00000627746.2
CDS-3UTR TCA 90 bp CCCAGCCTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGAAGTCGATTGTCCGAATCTaGTCCAGGGTCTGGATGGAG +
Preference number: 4 (lower is better)
Translates to: PSLRLRKMAESQWCEGQKSIVRI*SRVWME
Trigger: CTCCATCCAGACCCTGGATCAGATTCGGACAATCGA...CTTCTGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAGGCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS-3UTR TCA 90 bp TGCAGTAGCGCCACACAGTCACCGAGCCGTACTTGCGCAGGCACTCATCGTAGACACATGGGCCCATCATaGGGCACCTCTTGCTTTCGG +
Preference number: 4 (lower is better)
Translates to: CSSATQSPSRTCAGTHRRHMGPS*GTSCFR
Trigger: CCGAAAGCAAGAGGTGCCTCATGATGGGCCCATGTG...TCTACGATGAGTGCCTGCGCAAGTACGGCTCGGTGACTGTGTGGCGCTACTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563597.5
ENST00000563732.5
ENST00000566749.5
ENST00000627746.2
CDS-3UTR TCA 90 bp CAAAGATCTCAGTGCAGTAGCGCCACACAGTCACCGAGCCGTACTTGCGCAGGCCACATGGGCCCATCATaGGGCACCTCTTGCTTTCGG +
Preference number: 4 (lower is better)
Translates to: QRSQCSSATQSPSRTCAGHMGPS*GTSCFR
Trigger: CCGAAAGCAAGAGGTGCCTCATGATGGGCCCATGTG...GCCTGCGCAAGTACGGCTCGGTGACTGTGTGGCGCTACTGCACTGAGATCTTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563597.5
ENST00000563732.5
ENST00000566749.5
ENST00000627746.2
CDS-3UTR TCA 90 bp CCTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGAAGGGTTGGGTCACGATAGGAGATaGGGGCGGAACGGACTAAGA +
Preference number: 4 (lower is better)
Translates to: PPSEEDGRVTVVRGPEGLGHDRR*GRNGLR
Trigger: TCTTAGTCCGTTCCGCCCTCATCTCCTATCGTGACC...CAACCCTTCTGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566749.5
CDS-3UTR GCA 90 bp GCGATCAGGATAGCGAACCTTAAGTGCCAGCAGCAGGAGGAACGTTTCGACGCTCGCAGCTGCTCGATCTaGCGGTCCAGGTCGCTGATC +
Preference number: 4 (lower is better)
Translates to: AIRIANLKCQQQEERFDARSCSI*RSRSLI
Trigger: GATCAGCGACCTGGACCGGCAGATCGAGCAGCTGCG...AGCGTCGAAACGTTCCTCCTGCTGCTGGCACTTAAGGTTCGCTATCCTGATCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563597.5
ENST00000563732.5
ENST00000627746.2
CDS-3UTR GCA 90 bp CCCAGCCTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGAAGCCACCCTCTGCACGTTaGTCTCCTCTACCAAGATCT +
Preference number: 4 (lower is better)
Translates to: PSLRLRKMAESQWCEGQKPPSAR*SPLPRS
Trigger: AGATCTTGGTAGAGGAGAGCAACGTGCAGAGGGTGG...CTTCTGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAGGCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
CDS-3UTR GCA 90 bp AGCCTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGAAGGGTTCACCGAGCCGTACTTaGGCAGGCACTCATCGTAGA +
Preference number: 4 (lower is better)
Translates to: SLRLRKMAESQWCEGQKGSPSRT*AGTHRR
Trigger: TCTACGATGAGTGCCTGCGCAAGTACGGCTCGGTGA...ACCCTTCTGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS-3UTR GCA 90 bp CTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGAAGGGTTGGTCACCGAGCCGTACTTaGGCAGGCACTCATCGTAGA +
Preference number: 4 (lower is better)
Translates to: LRLRKMAESQWCEGQKGWSPSRT*AGTHRR
Trigger: TCTACGATGAGTGCCTGCGCAAGTACGGCTCGGTGA...CCAACCCTTCTGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS-3UTR GCA 90 bp GAGGGGGAGAGGCCCCCGTGCACGCAGAAGATCTTGCCATCGATGATGGCTGACGTCAATGTCATTGGCTaGGTTGAACTGGGCCACCAC +
Preference number: 4 (lower is better)
Translates to: EGERPPCTQKILPSMMADVNVIG*VELGHH
Trigger: GTGGTGGCCCAGTTCAACGCAGCCAATGACATTGAC...GTCAGCCATCATCGATGGCAAGATCTTCTGCGTGCACGGGGGCCTCTCCCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000563732.5
ENST00000566749.5
ENST00000627746.2
CDS-3UTR GCA 90 bp CCTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGAAGGGTTGGTAGCAGTAGTTGGGTaGCGACCACACAGTGAGCAC +
Preference number: 4 (lower is better)
Translates to: PPSEEDGRVTVVRGPEGLVAVVG*RPHSEH
Trigger: GTGCTCACTGTGTGGTCGGCACCCAACTACTGCTAC...CAACCCTTCTGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS-3UTR GCA 90 bp CTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGAAGGGTTGGGTAGCAGTAGTTGGGTaGCGACCACACAGTGAGCAC +
Preference number: 4 (lower is better)
Translates to: LRLRKMAESQWCEGQKGWVAVVG*RPHSEH
Trigger: GTGCTCACTGTGTGGTCGGCACCCAACTACTGCTAC...CCAACCCTTCTGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS-3UTR GCA 90 bp AGCCTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGAAGGGTGTAGCAGTAGTTGGGTaGCGACCACACAGTGAGCAC +
Preference number: 4 (lower is better)
Translates to: SLRLRKMAESQWCEGQKGVAVVG*RPHSEH
Trigger: GTGCTCACTGTGTGGTCGGCACCCAACTACTGCTAC...ACCCTTCTGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS-3UTR GCA 90 bp AGCCTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGAAGGGTCAGCTCCAAGATGGCTaGCACATTCCCACAGCGGTA +
Preference number: 4 (lower is better)
Translates to: SLRLRKMAESQWCEGQKGQLQDG*HIPTAV
Trigger: TACCGCTGTGGGAATGTGGCAGCCATCTTGGAGCTG...ACCCTTCTGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS-3UTR GCA 90 bp CCTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGAAGGGTTGCAGCTCCAAGATGGCTaGCACATTCCCACAGCGGTA +
Preference number: 4 (lower is better)
Translates to: PPSEEDGRVTVVRGPEGLQLQDG*HIPTAV
Trigger: TACCGCTGTGGGAATGTGGCAGCCATCTTGGAGCTG...CAACCCTTCTGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS-3UTR GCA 90 bp CCACACAGTCACCGAGCCGTACTTGCGCAGGCACTCATCGTAGAAGCCATAGACGCAGAGTCACAGTGGTaGGAGGGCCAGAAGGGTTGG +
Preference number: 4 (lower is better)
Translates to: PHSHRAVLAQALIVEAIDAESQW*EGQKGW
Trigger: CCAACCCTTCTGGCCCTCGCACCACTGTGACTCTGC...GTCTATGGCTTCTACGATGAGTGCCTGCGCAAGTACGGCTCGGTGACTGTGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CCA 90 bp AGCCTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGAAGGGTATCTGGCGACTCTCATaGTTGCCCCGGATCAGTGTG +
Preference number: 4 (lower is better)
Translates to: SLRLRKMAESQWCEGQKGIWRLS*LPRISV
Trigger: CACACTGATCCGGGGCAACCATGAGAGTCGCCAGAT...ACCCTTCTGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CCA 90 bp CCACACAGTCACCGAGCCGTACTTGCGCAGGCACTCATCGTAGAAGCCATAGACTCACGCCCCAGCCTGTaGTGTCTTCTGGGTCAGACC +
Preference number: 4 (lower is better)
Translates to: PHSHRAVLAQALIVEAIDSRPSL*CLLGQT
Trigger: GGTCTGACCCAGAAGACACCACAGGCTGGGGCGTGA...GTCTATGGCTTCTACGATGAGTGCCTGCGCAAGTACGGCTCGGTGACTGTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563732.5
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CCA 90 bp GCGCCACACAGTCACCGAGCCGTACTTGCGCAGGCACTCATCGTAGAAGCCATATTGGCTGCGTTGAACTaGGCCACCACGTCACTGCCA +
Preference number: 4 (lower is better)
Translates to: APHSHRAVLAQALIVEAILAALN*ATTSLP
Trigger: TGGCAGTGACGTGGTGGCCCAGTTCAACGCAGCCAA...TATGGCTTCTACGATGAGTGCCTGCGCAAGTACGGCTCGGTGACTGTGTGGCGC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563732.5
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CCA 90 bp TCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGAAGGGTTGGAGGGGCCTTCCATCACCAGTTaGTGGGCACGGCAGATCATG +
Preference number: 4 (lower is better)
Translates to: SEEDGRVTVVRGPEGLEGPSITS*WARQIM
Trigger: CATGATCTGCCGTGCCCACCAACTGGTGATGGAAGG...CCCCTCCAACCCTTCTGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CCA 90 bp TCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGAAGGGTTGGAGGGGATGCCCCGTGTCTCTTaGGGAGCAGCCTCAAAGATG +
Preference number: 4 (lower is better)
Translates to: SEEDGRVTVVRGPEGLEGMPRVS*GAASKM
Trigger: CATCTTTGAGGCTGCTCCCCAAGAGACACGGGGCAT...CCCCTCCAACCCTTCTGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CCA 90 bp GTGGGCACGGCAGATCATGTCAATGTCATTGGCTGCGTTGAACTGGGCCACCACCTCGAAGCACCCTCTTaGGGGACAGCAGAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: VGTADHVNVIGCVELGHHLEAPS*GTAEPG
Trigger: TCCTGGCTCTGCTGTCCCCCAAGAGGGTGCTTCGAG...GTGGTGGCCCAGTTCAACGCAGCCAATGACATTGACATGATCTGCCGTGCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566749.5
ENST00000627746.2
CDS-3UTR TCA 90 bp AGCCTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGAAGGGTGCCATCGATGATGGCTaGCAGGCTGAGGTAGTCAAA +
Preference number: 4 (lower is better)
Translates to: SLRLRKMAESQWCEGQKGAIDDG*QAEVVK
Trigger: TTTGACTACCTCAGCCTGTCAGCCATCATCGATGGC...ACCCTTCTGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS-3UTR TCA 90 bp CCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGAAGGGTTGGAGGCCATCGATGATGGCTaGCAGGCTGAGGTAGTCAAA +
Preference number: 4 (lower is better)
Translates to: PSEEDGRVTVVRGPEGLEAIDDG*QAEVVK
Trigger: TTTGACTACCTCAGCCTGTCAGCCATCATCGATGGC...CTCCAACCCTTCTGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS-3UTR TCA 90 bp AGCCTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGAAGGGTTCGATTGTCCGAATCTaGTCCAGGGTCTGGATGGAG +
Preference number: 4 (lower is better)
Translates to: SLRLRKMAESQWCEGQKGSIVRI*SRVWME
Trigger: CTCCATCCAGACCCTGGATCAGATTCGGACAATCGA...ACCCTTCTGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS-3UTR TCA 90 bp CCACACAGTCACCGAGCCGTACTTGCGCAGGCACTCATCGTAGAAGCCATAGACCACATGGGCCCATCATaGGGCACCTCTTGCTTTCGG +
Preference number: 4 (lower is better)
Translates to: PHSHRAVLAQALIVEAIDHMGPS*GTSCFR
Trigger: CCGAAAGCAAGAGGTGCCTCATGATGGGCCCATGTG...GTCTATGGCTTCTACGATGAGTGCCTGCGCAAGTACGGCTCGGTGACTGTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563597.5
ENST00000563732.5
ENST00000566749.5
ENST00000627746.2
CDS-3UTR GCA 90 bp ATCATGAGGCACCTCTTGCTTTCGGTCGATTGTCCGAATCTGATCCAGGGTCTGTCGCAGCGACGCAGCTaGTCGATCTGCCGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: IMRHLLLSVDCPNLIQGLSQRRS*SICRSR
Trigger: CCTGGACCGGCAGATCGAGCAGCTGCGTCGCTGCGA...CAGACCCTGGATCAGATTCGGACAATCGACCGAAAGCAAGAGGTGCCTCATGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563597.5
ENST00000563732.5
ENST00000566749.5
ENST00000627746.2
CDS-3UTR GCA 90 bp CACGCCCAGCCTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAAGTCAAAGATCTCAGTaGAGTAGCGCCACACAGTCA +
Preference number: 4 (lower is better)
Translates to: HAQPPSEEDGRVTVVRGPSQRSQ*SSATQS
Trigger: TGACTGTGTGGCGCTACTGCACTGAGATCTTTGACT...TGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAGGCTGGGCGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS-3UTR GCA 90 bp AAGTGCCAGCAGCAGGAGGAACGTTTCGACGCTATAGAAGCCACGGTCCACAAAGGGGAGAGGCCCCCGTaGACGCAGAAGATCTTGCCA +
Preference number: 4 (lower is better)
Translates to: KCQQQEERFDAIEATVHKGERPP*TQKILP
Trigger: TGGCAAGATCTTCTGCGTGCACGGGGGCCTCTCCCC...TTTGTGGACCGTGGCTTCTATAGCGTCGAAACGTTCCTCCTGCTGCTGGCACTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000563597.5
ENST00000563732.5
ENST00000627746.2
CDS-3UTR GCA 90 bp ACACATGGGCCCATCATGAGGCACCTCTTGCTTTCGGTCGATTGTCCGAATCTGGGGGAGAGGCCCCCGTaGACGCAGAAGATCTTGCCA +
Preference number: 4 (lower is better)
Translates to: THGPIMRHLLLSVDCPNLGERPP*TQKILP
Trigger: TGGCAAGATCTTCTGCGTGCACGGGGGCCTCTCCCC...CAGATTCGGACAATCGACCGAAAGCAAGAGGTGCCTCATGATGGGCCCATGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000563597.5
ENST00000563732.5
ENST00000566749.5
ENST00000627746.2
CDS-3UTR GCA 90 bp CCTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGAAGGGTTGGTCAATGTCATTGGCTaGGTTGAACTGGGCCACCAC +
Preference number: 4 (lower is better)
Translates to: PPSEEDGRVTVVRGPEGLVNVIG*VELGHH
Trigger: GTGGTGGCCCAGTTCAACGCAGCCAATGACATTGAC...CAACCCTTCTGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS-3UTR GCA 90 bp TTGGTGGGCACGGCAGATCATGTCAATGTCATTGGCTGCGTTGAACTGGGCCACGCAGAGTCACAGTGGTaGGAGGGCCAGAAGGGTTGG +
Preference number: 4 (lower is better)
Translates to: LVGTADHVNVIGCVELGHAESQW*EGQKGW
Trigger: CCAACCCTTCTGGCCCTCGCACCACTGTGACTCTGC...GTGGCCCAGTTCAACGCAGCCAATGACATTGACATGATCTGCCGTGCCCACCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CCA 90 bp ACACATGGGCCCATCATGAGGCACCTCTTGCTTTCGGTCGATTGTCCGAATCTGGCCGCACACTGTGACTaGCGAGTCCACCCTCTGCAC +
Preference number: 4 (lower is better)
Translates to: THGPIMRHLLLSVDCPNLAAHCD*RVHPLH
Trigger: GTGCAGAGGGTGGACTCGCCAGTCACAGTGTGCGGC...CAGATTCGGACAATCGACCGAAAGCAAGAGGTGCCTCATGATGGGCCCATGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563597.5
ENST00000566749.5
CDS-3UTR CCA 90 bp CCACACAGTCACCGAGCCGTACTTGCGCAGGCACTCATCGTAGAAGCCATAGACGCCTGTGGTGTCTTCTaGGTCAGACCAGAGGAGGTC +
Preference number: 4 (lower is better)
Translates to: PHSHRAVLAQALIVEAIDACGVF*VRPEEV
Trigger: GACCTCCTCTGGTCTGACCCAGAAGACACCACAGGC...GTCTATGGCTTCTACGATGAGTGCCTGCGCAAGTACGGCTCGGTGACTGTGTGG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563732.5
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CCA 90 bp GGTAGTCAAAGATCTCAGTGCAGTAGCGCCACACAGTCACCGAGCCGTACTTGCTCACGCCCCAGCCTGTaGTGTCTTCTGGGTCAGACC +
Preference number: 4 (lower is better)
Translates to: GSQRSQCSSATQSPSRTCSRPSL*CLLGQT
Trigger: GGTCTGACCCAGAAGACACCACAGGCTGGGGCGTGA...GCAAGTACGGCTCGGTGACTGTGTGGCGCTACTGCACTGAGATCTTTGACTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563732.5
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CCA 90 bp AGCCTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGAAGGGTTCCATCACCAGTTGGTaGGCACGGCAGATCATGTCA +
Preference number: 4 (lower is better)
Translates to: SLRLRKMAESQWCEGQKGSITSW*ARQIMS
Trigger: TGACATGATCTGCCGTGCCCACCAACTGGTGATGGA...ACCCTTCTGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CCA 90 bp GAGGTCACACATGGGCCCATCATGAGGCACCTCTTGCTTTCGGTCGATTGTCCGCGTCCAGCTCCAAGATaGCTGCCACATTCCCACAGC +
Preference number: 4 (lower is better)
Translates to: EVTHGPIMRHLLLSVDCPRPAPR*LPHSHS
Trigger: GCTGTGGGAATGTGGCAGCCATCTTGGAGCTGGACG...CGGACAATCGACCGAAAGCAAGAGGTGCCTCATGATGGGCCCATGTGTGACCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CCA 90 bp ACTGGGCCACCACGTCACTGCCAAATAGGTAGCCGGCTCCTCGGGGGCTCACGCATGATGAAATCTTTCTaGAGATGCTCGTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: TGPPRHCQIGSRLLGGSRMMKSF*RCSSSS
Trigger: GGAGCTGGACGAGCATCTCCAGAAAGATTTCATCAT...GCGTGAGCCCCCGAGGAGCCGGCTACCTATTTGGCAGTGACGTGGTGGCCCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CCA 90 bp TGCGATCAGGATAGCGAACCAGTGACACAGCTCCAAGGTGGGGCTGGTCACGATATGGCAGAGTCACAGTaGTGCGAGGGCCAGAAGGGT +
Preference number: 4 (lower is better)
Translates to: CDQDSEPVTQLQGGAGHDMAESQ*CEGQKG
Trigger: ACCCTTCTGGCCCTCGCACCACTGTGACTCTGCCAT...ATCGTGACCAGCCCCACCTTGGAGCTGTGTCACTGGTTCGCTATCCTGATCGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566749.5
3UTR CAA 72 bp TGGGCCCATCATGAGGCACCTCTTGCTTTCGGTCGATaGTCCGAATCTGATCCAGGGTCTGGATGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: WAHHEAPLAFGR*SESDPGSGWRG
Trigger: CCCCCTCCATCCAGACCCTGGATCAGATTCGGACAATCGACCGAAAGCAAGAGGTGCCTCATGATGGGCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563597.5
ENST00000563732.5
ENST00000566749.5
ENST00000627746.2
CDS-3UTR TCA 90 bp GCCCATCATGAGGCACCTCTTGCTTTCGGTCGATTGTCCGAATCTGATCCAGGGTGTCATTGGCTGCGTTaGACTGGGCCACCACGTCAC +
Preference number: 4 (lower is better)
Translates to: AHHEAPLAFGRLSESDPGCHWLR*TGPPRH
Trigger: GTGACGTGGTGGCCCAGTTCAACGCAGCCAATGACA...CCCTGGATCAGATTCGGACAATCGACCGAAAGCAAGAGGTGCCTCATGATGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563732.5
ENST00000566749.5
ENST00000627746.2
CDS-3UTR TCA 90 bp GTAGCAGTAGTTGGGTGCCGACCACACAGTGAGCACCGTCTCATTGAAGTGCCATGTCATTGGCTGCGTTaGACTGGGCCACCACGTCAC +
Preference number: 4 (lower is better)
Translates to: VAVVGCRPHSEHRLIEVPCHWLR*TGPPRH
Trigger: GTGACGTGGTGGCCCAGTTCAACGCAGCCAATGACA...TGGCACTTCAATGAGACGGTGCTCACTGTGTGGTCGGCACCCAACTACTGCTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566749.5
ENST00000627746.2
CDS-3UTR TCA 90 bp ATCATGAGGCACCTCTTGCTTTCGGTCGATTGTCCGAATCTGATCCAGGGTCTGCGCCCAGCCTCCGTCTaGGGAAGATGGCAGAGTCAC +
Preference number: 4 (lower is better)
Translates to: IMRHLLLSVDCPNLIQGLRPASV*GRWQSH
Trigger: GTGACTCTGCCATCTTCCTCAGACGGAGGCTGGGCG...CAGACCCTGGATCAGATTCGGACAATCGACCGAAAGCAAGAGGTGCCTCATGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566749.5
ENST00000627746.2
CDS-3UTR GCA 90 bp ATCATGAGGCACCTCTTGCTTTCGGTCGATTGTCCGAATCTGATCCAGGGTCTGCGCAGCTGCTCGATCTaGCGGTCCAGGTCGCTGATC +
Preference number: 4 (lower is better)
Translates to: IMRHLLLSVDCPNLIQGLRSCSI*RSRSLI
Trigger: GATCAGCGACCTGGACCGGCAGATCGAGCAGCTGCG...CAGACCCTGGATCAGATTCGGACAATCGACCGAAAGCAAGAGGTGCCTCATGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563597.5
ENST00000563732.5
ENST00000566749.5
ENST00000627746.2
CDS-3UTR GCA 90 bp AGGATAGCGAACCTTAAGTGCCAGCAGCAGGAGGAACGTTTCGACGCTATAGAATCGCAGCGACGCAGCTaGTCGATCTGCCGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: RIANLKCQQQEERFDAIESQRRS*SICRSR
Trigger: CCTGGACCGGCAGATCGAGCAGCTGCGTCGCTGCGA...TTCTATAGCGTCGAAACGTTCCTCCTGCTGCTGGCACTTAAGGTTCGCTATCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563597.5
ENST00000563732.5
ENST00000627746.2
CDS-3UTR CCA 90 bp GTAGCAGTAGTTGGGTGCCGACCACACAGTGAGCACCGTCTCATTGAAGTGCCATTGGCTGCGTTGAACTaGGCCACCACGTCACTGCCA +
Preference number: 4 (lower is better)
Translates to: VAVVGCRPHSEHRLIEVPLAALN*ATTSLP
Trigger: TGGCAGTGACGTGGTGGCCCAGTTCAACGCAGCCAA...TGGCACTTCAATGAGACGGTGCTCACTGTGTGGTCGGCACCCAACTACTGCTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CCA 90 bp ATAGACCTGCGTGATCTGGCGACTCTCATGGTTGCCCCGGATCAGTGTGATGCGCCTTCCATCACCAGTTaGTGGGCACGGCAGATCATG +
Preference number: 4 (lower is better)
Translates to: IDLRDLATLMVAPDQCDAPSITS*WARQIM
Trigger: CATGATCTGCCGTGCCCACCAACTGGTGATGGAAGG...CGCATCACACTGATCCGGGGCAACCATGAGAGTCGCCAGATCACGCAGGTCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CCA 90 bp GAGGTCACACATGGGCCCATCATGAGGCACCTCTTGCTTTCGGTCGATTGTCCGCCTTCCATCACCAGTTaGTGGGCACGGCAGATCATG +
Preference number: 4 (lower is better)
Translates to: EVTHGPIMRHLLLSVDCPPSITS*WARQIM
Trigger: CATGATCTGCCGTGCCCACCAACTGGTGATGGAAGG...CGGACAATCGACCGAAAGCAAGAGGTGCCTCATGATGGGCCCATGTGTGACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CCA 90 bp GCGATCAGGATAGCGAACCTTAAGTGCCAGCAGCAGGAGGAACGTTTCGACGCTCGTCCAGCTCCAAGATaGCTGCCACATTCCCACAGC +
Preference number: 4 (lower is better)
Translates to: AIRIANLKCQQQEERFDARPAPR*LPHSHS
Trigger: GCTGTGGGAATGTGGCAGCCATCTTGGAGCTGGACG...AGCGTCGAAACGTTCCTCCTGCTGCTGGCACTTAAGGTTCGCTATCCTGATCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627746.2
CDS-3UTR CCA 90 bp TGGGCACGGCAGATCATGTCAATGTCATTGGCTGCGTTGAACTGGGCCACCACGATGCCCCGTGTCTCTTaGGGAGCAGCCTCAAAGATG +
Preference number: 4 (lower is better)
Translates to: WARQIMSMSLAALNWATTMPRVS*GAASKM
Trigger: CATCTTTGAGGCTGCTCCCCAAGAGACACGGGGCAT...CGTGGTGGCCCAGTTCAACGCAGCCAATGACATTGACATGATCTGCCGTGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CCA 90 bp CTTGCTTTCGGTCGATTGTCCGAATCTGATCCAGGGTCTGGATGGAGGGGGAGAATGGCAGAGTCACAGTaGTGCGAGGGCCAGAAGGGT +
Preference number: 4 (lower is better)
Translates to: LAFGRLSESDPGSGWRGRMAESQ*CEGQKG
Trigger: ACCCTTCTGGCCCTCGCACCACTGTGACTCTGCCAT...TCTCCCCCTCCATCCAGACCCTGGATCAGATTCGGACAATCGACCGAAAGCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000566749.5
ENST00000627746.2
3UTR CAA 72 bp ACCAGTTGGTGGGCACGGCAGATCATGTCAATGTCATaGGCTGCGTTGAACTGGGCCACCACGTCACTGCCA +
Preference number: 4 (lower is better)
Translates to: TSWWARQIMSMS*AALNWATTSLP
Trigger: TGGCAGTGACGTGGTGGCCCAGTTCAACGCAGCCAATGACATTGACATGATCTGCCGTGCCCACCAACTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566749.5
ENST00000627746.2
CDS-3UTR TCA 90 bp CTCTTGCTTTCGGTCGATTGTCCGAATCTGATCCAGGGTCTGGATGGAGGGGGATGCCCCGGATCAGTGTaGTGCGATCAGGATAGCGAA +
Preference number: 4 (lower is better)
Translates to: LLLSVDCPNLIQGLDGGGCPGSV*CDQDSE
Trigger: TTCGCTATCCTGATCGCATCACACTGATCCGGGGCA...TCCCCCTCCATCCAGACCCTGGATCAGATTCGGACAATCGACCGAAAGCAAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000563597.5
ENST00000563732.5
ENST00000566749.5
ENST00000627746.2
CDS-3UTR TCA 90 bp GCGATCAGGATAGCGAACCTTAAGTGCCAGCAGCAGGAGGAACGTTTCGACGCTTGCCCCGGATCAGTGTaGTGCGATCAGGATAGCGAA +
Preference number: 4 (lower is better)
Translates to: AIRIANLKCQQQEERFDACPGSV*CDQDSE
Trigger: TTCGCTATCCTGATCGCATCACACTGATCCGGGGCA...AGCGTCGAAACGTTCCTCCTGCTGCTGGCACTTAAGGTTCGCTATCCTGATCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563597.5
ENST00000563732.5
ENST00000627746.2
CDS-3UTR TCA 90 bp CCACACAGTCACCGAGCCGTACTTGCGCAGGCACTCATCGTAGAAGCCATAGACGCCATCGATGATGGCTaGCAGGCTGAGGTAGTCAAA +
Preference number: 4 (lower is better)
Translates to: PHSHRAVLAQALIVEAIDAIDDG*QAEVVK
Trigger: TTTGACTACCTCAGCCTGTCAGCCATCATCGATGGC...GTCTATGGCTTCTACGATGAGTGCCTGCGCAAGTACGGCTCGGTGACTGTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563597.5
ENST00000563732.5
ENST00000566749.5
ENST00000627746.2
CDS-3UTR TCA 90 bp ATAGACCTGCGTGATCTGGCGACTCTCATGGTTGCCCCGGATCAGTGTGATGCGTCGATTGTCCGAATCTaGTCCAGGGTCTGGATGGAG +
Preference number: 4 (lower is better)
Translates to: IDLRDLATLMVAPDQCDASIVRI*SRVWME
Trigger: CTCCATCCAGACCCTGGATCAGATTCGGACAATCGA...CGCATCACACTGATCCGGGGCAACCATGAGAGTCGCCAGATCACGCAGGTCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563597.5
ENST00000563732.5
ENST00000566749.5
ENST00000627746.2
CDS-3UTR TCA 90 bp GAGGTAGTCAAAGATCTCAGTGCAGTAGCGCCACACAGTCACCGAGCCGTACTTCACATGGGCCCATCATaGGGCACCTCTTGCTTTCGG +
Preference number: 4 (lower is better)
Translates to: EVVKDLSAVAPHSHRAVLHMGPS*GTSCFR
Trigger: CCGAAAGCAAGAGGTGCCTCATGATGGGCCCATGTG...AAGTACGGCTCGGTGACTGTGTGGCGCTACTGCACTGAGATCTTTGACTACCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563597.5
ENST00000563732.5
ENST00000566749.5
ENST00000627746.2
CDS-3UTR GCA 90 bp GTGGGCACGGCAGATCATGTCAATGTCATTGGCTGCGTTGAACTGGGCCACCACCCACCCTCTGCACGTTaGTCTCCTCTACCAAGATCT +
Preference number: 4 (lower is better)
Translates to: VGTADHVNVIGCVELGHHPPSAR*SPLPRS
Trigger: AGATCTTGGTAGAGGAGAGCAACGTGCAGAGGGTGG...GTGGTGGCCCAGTTCAACGCAGCCAATGACATTGACATGATCTGCCGTGCCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566749.5
CDS-3UTR GCA 90 bp ATCACCAGTTGGTGGGCACGGCAGATCATGTCAATGTCATTGGCTGCGTTGAACGGCGAGTCCACCCTCTaGACGTTGCTCTCCTCTACC +
Preference number: 4 (lower is better)
Translates to: ITSWWARQIMSMSLAALNGESTL*TLLSST
Trigger: GGTAGAGGAGAGCAACGTGCAGAGGGTGGACTCGCC...GTTCAACGCAGCCAATGACATTGACATGATCTGCCGTGCCCACCAACTGGTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566749.5
CDS-3UTR GCA 90 bp CTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGAAGGGTTGGAGTCAAAGATCTCAGTaGAGTAGCGCCACACAGTCA +
Preference number: 4 (lower is better)
Translates to: LRLRKMAESQWCEGQKGWSQRSQ*SSATQS
Trigger: TGACTGTGTGGCGCTACTGCACTGAGATCTTTGACT...CCAACCCTTCTGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS-3UTR GCA 90 bp GTAACCTTCCATCACCAGTTGGTGGGCACGGCAGATCATGTCAATGTCATTGGCGGGCCACCACGTCACTaGCAAATAGGTAGCCGGCTC +
Preference number: 4 (lower is better)
Translates to: VTFHHQLVGTADHVNVIGGPPRH*QIGSRL
Trigger: GAGCCGGCTACCTATTTGGCAGTGACGTGGTGGCCC...GCCAATGACATTGACATGATCTGCCGTGCCCACCAACTGGTGATGGAAGGTTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566749.5
ENST00000627746.2
CDS-3UTR GCA 90 bp CTTGCTTTCGGTCGATTGTCCGAATCTGATCCAGGGTCTGGATGGAGGGGGAGACAGCTCCAAGATGGCTaGCACATTCCCACAGCGGTA +
Preference number: 4 (lower is better)
Translates to: LAFGRLSESDPGSGWRGRQLQDG*HIPTAV
Trigger: TACCGCTGTGGGAATGTGGCAGCCATCTTGGAGCTG...TCTCCCCCTCCATCCAGACCCTGGATCAGATTCGGACAATCGACCGAAAGCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000566749.5
ENST00000627746.2
CDS-3UTR GCA 90 bp CCCAGCCTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGAAGAAATCTTTCTGGAGATaGTCGTCCAGCTCCAAGATG +
Preference number: 4 (lower is better)
Translates to: PSLRLRKMAESQWCEGQKKSFWR*SSSSKM
Trigger: CATCTTGGAGCTGGACGAGCATCTCCAGAAAGATTT...CTTCTGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAGGCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CCA 90 bp CACCGTCTCATTGAAGTGCCACTTGTAACCTTCCATCACCAGTTGGTGGGCACGTTGGCTGCGTTGAACTaGGCCACCACGTCACTGCCA +
Preference number: 4 (lower is better)
Translates to: HRLIEVPLVTFHHQLVGTLAALN*ATTSLP
Trigger: TGGCAGTGACGTGGTGGCCCAGTTCAACGCAGCCAA...CGTGCCCACCAACTGGTGATGGAAGGTTACAAGTGGCACTTCAATGAGACGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566749.5
ENST00000627746.2
3UTR CAA 72 bp GAGGAGGTCACACATGGGCCCATCATGAGGCACCTCTaGCTTTCGGTCGATTGTCCGAATCTGATCCAGGGT +
Preference number: 4 (lower is better)
Translates to: EEVTHGPIMRHL*LSVDCPNLIQG
Trigger: ACCCTGGATCAGATTCGGACAATCGACCGAAAGCAAGAGGTGCCTCATGATGGGCCCATGTGTGACCTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563597.5
ENST00000563732.5
ENST00000566749.5
ENST00000627746.2
CDS-3UTR TCA 90 bp AGAGGAGGTCACACATGGGCCCATCATGAGGCACCTCTTGCTTTCGGTCGATTGGCCATCGATGATGGCTaGCAGGCTGAGGTAGTCAAA +
Preference number: 4 (lower is better)
Translates to: RGGHTWAHHEAPLAFGRLAIDDG*QAEVVK
Trigger: TTTGACTACCTCAGCCTGTCAGCCATCATCGATGGC...CAATCGACCGAAAGCAAGAGGTGCCTCATGATGGGCCCATGTGTGACCTCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563597.5
ENST00000563732.5
ENST00000566749.5
ENST00000627746.2
CDS-3UTR GCA 90 bp GCGATCAGGATAGCGAACCTTAAGTGCCAGCAGCAGGAGGAACGTTTCGACGCTCCACCCTCTGCACGTTaGTCTCCTCTACCAAGATCT +
Preference number: 4 (lower is better)
Translates to: AIRIANLKCQQQEERFDAPPSAR*SPLPRS
Trigger: AGATCTTGGTAGAGGAGAGCAACGTGCAGAGGGTGG...AGCGTCGAAACGTTCCTCCTGCTGCTGGCACTTAAGGTTCGCTATCCTGATCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563597.5
CDS-3UTR GCA 90 bp ACACATGGGCCCATCATGAGGCACCTCTTGCTTTCGGTCGATTGTCCGAATCTGTCACCGAGCCGTACTTaGGCAGGCACTCATCGTAGA +
Preference number: 4 (lower is better)
Translates to: THGPIMRHLLLSVDCPNLSPSRT*AGTHRR
Trigger: TCTACGATGAGTGCCTGCGCAAGTACGGCTCGGTGA...CAGATTCGGACAATCGACCGAAAGCAAGAGGTGCCTCATGATGGGCCCATGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563597.5
ENST00000563732.5
ENST00000566749.5
ENST00000627746.2
CDS-3UTR GCA 90 bp GAGGTAGTCAAAGATCTCAGTGCAGTAGCGCCACACAGTCACCGAGCCGTACTTTCACCGAGCCGTACTTaGGCAGGCACTCATCGTAGA +
Preference number: 4 (lower is better)
Translates to: EVVKDLSAVAPHSHRAVLSPSRT*AGTHRR
Trigger: TCTACGATGAGTGCCTGCGCAAGTACGGCTCGGTGA...AAGTACGGCTCGGTGACTGTGTGGCGCTACTGCACTGAGATCTTTGACTACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563597.5
ENST00000563732.5
ENST00000566749.5
ENST00000627746.2
CDS-3UTR GCA 90 bp CAGTCACCGAGCCGTACTTGCGCAGGCACTCATCGTAGAAGCCATAGACCTGCGAGTCAAAGATCTCAGTaGAGTAGCGCCACACAGTCA +
Preference number: 4 (lower is better)
Translates to: QSPSRTCAGTHRRSHRPASQRSQ*SSATQS
Trigger: TGACTGTGTGGCGCTACTGCACTGAGATCTTTGACT...CGCAGGTCTATGGCTTCTACGATGAGTGCCTGCGCAAGTACGGCTCGGTGACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563597.5
ENST00000563732.5
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CCA 90 bp TGTAACCTTCCATCACCAGTTGGTGGGCACGGCAGATCATGTCAATGTCATTGGTCACGCCCCAGCCTGTaGTGTCTTCTGGGTCAGACC +
Preference number: 4 (lower is better)
Translates to: CNLPSPVGGHGRSCQCHWSRPSL*CLLGQT
Trigger: GGTCTGACCCAGAAGACACCACAGGCTGGGGCGTGA...CCAATGACATTGACATGATCTGCCGTGCCCACCAACTGGTGATGGAAGGTTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CCA 90 bp CCTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGAAGGGTTGATGATGAAATCTTTCTaGAGATGCTCGTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: PPSEEDGRVTVVRGPEGLMMKSF*RCSSSS
Trigger: GGAGCTGGACGAGCATCTCCAGAAAGATTTCATCAT...CAACCCTTCTGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CCA 90 bp CTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGAAGGGTTGGATGATGAAATCTTTCTaGAGATGCTCGTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: LRLRKMAESQWCEGQKGWMMKSF*RCSSSS
Trigger: GGAGCTGGACGAGCATCTCCAGAAAGATTTCATCAT...CCAACCCTTCTGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS-3UTR TCA 90 bp GAGGTAGTCAAAGATCTCAGTGCAGTAGCGCCACACAGTCACCGAGCCGTACTTTCGATTGTCCGAATCTaGTCCAGGGTCTGGATGGAG +
Preference number: 4 (lower is better)
Translates to: EVVKDLSAVAPHSHRAVLSIVRI*SRVWME
Trigger: CTCCATCCAGACCCTGGATCAGATTCGGACAATCGA...AAGTACGGCTCGGTGACTGTGTGGCGCTACTGCACTGAGATCTTTGACTACCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563597.5
ENST00000563732.5
ENST00000566749.5
ENST00000627746.2
CDS-3UTR TCA 90 bp AACCTTAAGTGCCAGCAGCAGGAGGAACGTTTCGACGCTATAGAAGCCACGGTCTCGATTGTCCGAATCTaGTCCAGGGTCTGGATGGAG +
Preference number: 4 (lower is better)
Translates to: NLKCQQQEERFDAIEATVSIVRI*SRVWME
Trigger: CTCCATCCAGACCCTGGATCAGATTCGGACAATCGA...GACCGTGGCTTCTATAGCGTCGAAACGTTCCTCCTGCTGCTGGCACTTAAGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563597.5
ENST00000563732.5
ENST00000627746.2
CDS-3UTR TCA 90 bp TCCATCACCAGTTGGTGGGCACGGCAGATCATGTCAATGTCATTGGCTGCGTTGTCGATTGTCCGAATCTaGTCCAGGGTCTGGATGGAG +
Preference number: 4 (lower is better)
Translates to: SITSWWARQIMSMSLAALSIVRI*SRVWME
Trigger: CTCCATCCAGACCCTGGATCAGATTCGGACAATCGA...CAACGCAGCCAATGACATTGACATGATCTGCCGTGCCCACCAACTGGTGATGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566749.5
ENST00000627746.2
CDS-3UTR TCA 90 bp ATTGAAGTGCCACTTGTAACCTTCCATCACCAGTTGGTGGGCACGGCAGATCATAGGATAGCGAACCAGTaGCACAGCTCCAAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: IEVPLVTFHHQLVGTADHRIANQ*HSSKVG
Trigger: CCCCACCTTGGAGCTGTGTCACTGGTTCGCTATCCT...ATGATCTGCCGTGCCCACCAACTGGTGATGGAAGGTTACAAGTGGCACTTCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566749.5
CDS-3UTR GCA 90 bp CACCGTCTCATTGAAGTGCCACTTGTAACCTTCCATCACCAGTTGGTGGGCACGGTCAATGTCATTGGCTaGGTTGAACTGGGCCACCAC +
Preference number: 4 (lower is better)
Translates to: HRLIEVPLVTFHHQLVGTVNVIG*VELGHH
Trigger: GTGGTGGCCCAGTTCAACGCAGCCAATGACATTGAC...CGTGCCCACCAACTGGTGATGGAAGGTTACAAGTGGCACTTCAATGAGACGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566749.5
ENST00000627746.2
CDS-3UTR GCA 90 bp GCAGTAGCGCCACACAGTCACCGAGCCGTACTTGCGCAGGCACTCATCGTAGAAAAATCTTTCTGGAGATaGTCGTCCAGCTCCAAGATG +
Preference number: 4 (lower is better)
Translates to: AVAPHSHRAVLAQALIVEKSFWR*SSSSKM
Trigger: CATCTTGGAGCTGGACGAGCATCTCCAGAAAGATTT...TTCTACGATGAGTGCCTGCGCAAGTACGGCTCGGTGACTGTGTGGCGCTACTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000566749.5
ENST00000627746.2
CDS-3UTR TCA 90 bp TGCCGACCACACAGTGAGCACCGTCTCATTGAAGTGCCACTTGTAACCTTCCATGCCATCGATGATGGCTaGCAGGCTGAGGTAGTCAAA +
Preference number: 4 (lower is better)
Translates to: CRPHSEHRLIEVPLVTFHAIDDG*QAEVVK
Trigger: TTTGACTACCTCAGCCTGTCAGCCATCATCGATGGC...ATGGAAGGTTACAAGTGGCACTTCAATGAGACGGTGCTCACTGTGTGGTCGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566749.5
ENST00000627746.2
CDS-3UTR GCA 90 bp GGTAGTCAAAGATCTCAGTGCAGTAGCGCCACACAGTCACCGAGCCGTACTTGCAGTCAAAGATCTCAGTaGAGTAGCGCCACACAGTCA +
Preference number: 4 (lower is better)
Translates to: GSQRSQCSSATQSPSRTCSQRSQ*SSATQS
Trigger: TGACTGTGTGGCGCTACTGCACTGAGATCTTTGACT...GCAAGTACGGCTCGGTGACTGTGTGGCGCTACTGCACTGAGATCTTTGACTACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563597.5
ENST00000563732.5
ENST00000566749.5
ENST00000627746.2
CDS-3UTR GCA 90 bp AGAGGAGGTCACACATGGGCCCATCATGAGGCACCTCTTGCTTTCGGTCGATTGAGTCAAAGATCTCAGTaGAGTAGCGCCACACAGTCA +
Preference number: 4 (lower is better)
Translates to: RGGHTWAHHEAPLAFGRLSQRSQ*SSATQS
Trigger: TGACTGTGTGGCGCTACTGCACTGAGATCTTTGACT...CAATCGACCGAAAGCAAGAGGTGCCTCATGATGGGCCCATGTGTGACCTCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563597.5
ENST00000563732.5
ENST00000566749.5
ENST00000627746.2
CDS-3UTR GCA 90 bp ATTGAAGTGCCACTTGTAACCTTCCATCACCAGTTGGTGGGCACGGCAGATCATGTAGCAGTAGTTGGGTaGCGACCACACAGTGAGCAC +
Preference number: 4 (lower is better)
Translates to: IEVPLVTFHHQLVGTADHVAVVG*RPHSEH
Trigger: GTGCTCACTGTGTGGTCGGCACCCAACTACTGCTAC...ATGATCTGCCGTGCCCACCAACTGGTGATGGAAGGTTACAAGTGGCACTTCAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CCA 90 bp GTGGGCACGGCAGATCATGTCAATGTCATTGGCTGCGTTGAACTGGGCCACCACATGATGAAATCTTTCTaGAGATGCTCGTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: VGTADHVNVIGCVELGHHMMKSF*RCSSSS
Trigger: GGAGCTGGACGAGCATCTCCAGAAAGATTTCATCAT...GTGGTGGCCCAGTTCAACGCAGCCAATGACATTGACATGATCTGCCGTGCCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566749.5
ENST00000627746.2
CDS-3UTR GCA 90 bp TTGGGGAGCAGCCTCAAAGATGATGAAATCTTTCTGGAGATGCTCGTCCAGCTCGTCAATGTCATTGGCTaGGTTGAACTGGGCCACCAC +
Preference number: 4 (lower is better)
Translates to: LGSSLKDDEIFLEMLVQLVNVIG*VELGHH
Trigger: GTGGTGGCCCAGTTCAACGCAGCCAATGACATTGAC...GAGCTGGACGAGCATCTCCAGAAAGATTTCATCATCTTTGAGGCTGCTCCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566749.5
ENST00000627746.2
CDS-3UTR GCA 90 bp GCCTCAAAGATGATGAAATCTTTCTGGAGATGCTCGTCCAGCTCCAAGATGGCTCAGCTCCAAGATGGCTaGCACATTCCCACAGCGGTA +
Preference number: 4 (lower is better)
Translates to: ASKMMKSFWRCSSSSKMAQLQDG*HIPTAV
Trigger: TACCGCTGTGGGAATGTGGCAGCCATCTTGGAGCTG...AGCCATCTTGGAGCTGGACGAGCATCTCCAGAAAGATTTCATCATCTTTGAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CCA 90 bp AGCAGCCTCAAAGATGATGAAATCTTTCTGGAGATGCTCGTCCAGCTCCAAGATATGCCCCGTGTCTCTTaGGGAGCAGCCTCAAAGATG +
Preference number: 4 (lower is better)
Translates to: SSLKDDEIFLEMLVQLQDMPRVS*GAASKM
Trigger: CATCTTTGAGGCTGCTCCCCAAGAGACACGGGGCAT...ATCTTGGAGCTGGACGAGCATCTCCAGAAAGATTTCATCATCTTTGAGGCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566749.5
ENST00000627746.2
3UTR CAA 72 bp CTCATTGAAGTGCCACTTGTAACCTTCCATCACCAGTaGGTGGGCACGGCAGATCATGTCAATGTCATTGGC +
Preference number: 4 (lower is better)
Translates to: LIEVPLVTFHHQ*VGTADHVNVIG
Trigger: GCCAATGACATTGACATGATCTGCCGTGCCCACCAACTGGTGATGGAAGGTTACAAGTGGCACTTCAATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566749.5
ENST00000627746.2
CDS-3UTR GCA 90 bp TTGGGGAGCAGCCTCAAAGATGATGAAATCTTTCTGGAGATGCTCGTCCAGCTCAAATCTTTCTGGAGATaGTCGTCCAGCTCCAAGATG +
Preference number: 4 (lower is better)
Translates to: LGSSLKDDEIFLEMLVQLKSFWR*SSSSKM
Trigger: CATCTTGGAGCTGGACGAGCATCTCCAGAAAGATTT...GAGCTGGACGAGCATCTCCAGAAAGATTTCATCATCTTTGAGGCTGCTCCCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566749.5
ENST00000627746.2
CDS GCA 90 bp AGGGGTCTCCGCCGCTGCGACTCCGGTTCCGGCTCTCCGGCTCCCTaGCTCCCTCTTTCACTCCGCTTTCGACCGCCGCCGCCGCCGCCG +
Preference number: 5 (lower is better)
Translates to: RGLRRCDSGSGSPAP*LPLSLRFRPPPPPP
Trigger: CGGCGGCGGCGGCGGCGGTCGAAAGCGGAGTGAAAGAGGGAGGCAGGGAGCCGGAGAGCCGGAACCGGAGTCGCAGCGGCGGAGACCCCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000279387.12
ENST00000563200.5
ENST00000563597.5
ENST00000563732.5
ENST00000564966.5
ENST00000568810.5
CDS GCA 90 bp CTCTATTACCGCCGCTGCGACTCCGGTTCCGGCTCTCCGGCTCCCTaGCTCCCTCTTTCACTCCGCTTTCGACCGCCGCCGCCGCCGCCG +
Preference number: 5 (lower is better)
Translates to: LYYRRCDSGSGSPAP*LPLSLRFRPPPPPP
Trigger: CGGCGGCGGCGGCGGCGGTCGAAAGCGGAGTGAAAGAGGGAGGCAGGGAGCCGGAGAGCCGGAACCGGAGTCGCAGCGGCGGTAATAGAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567040.5
CDS GCA 90 bp ACTTCGCTCTCCTTGATGAGCTCGCAGCGACGCAGCTGCTCGATCTaGCGGTCCAGGTCGCTGATCTCCGCCATGGCCCACCCCCGGCGC +
Preference number: 5 (lower is better)
Translates to: TSLSLMSSQRRSCSI*RSRSLISAMAHPRR
Trigger: GCGCCGGGGGTGGGCCATGGCGGAGATCAGCGACCTGGACCGGCAGATCGAGCAGCTGCGTCGCTGCGAGCTCATCAAGGAGAGCGAAGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000562222.5
ENST00000562664.5
ENST00000563200.5
ENST00000563597.5
ENST00000563732.5
ENST00000564966.5
ENST00000566749.5
ENST00000567040.5
ENST00000567642.1
ENST00000567828.1
ENST00000568810.5
ENST00000627746.2
CDS GCA 90 bp GCCCGGCCCGAGGTCGCCCAGGTTGGGGGTGCAGAAGCCGGGGACTaGCACCTTAAGTGCCAGCAGCAGGAGGAACGTTTCGACGCTATA +
Preference number: 5 (lower is better)
Translates to: ARPEVAQVGGAEAGD*HLKCQQQEERFDAI
Trigger: TATAGCGTCGAAACGTTCCTCCTGCTGCTGGCACTTAAGGTGGCAGTCCCCGGCTTCTGCACCCCCAACCTGGGCGACCTCGGGCCGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000564966.5
ENST00000566749.5
ENST00000567828.1
ENST00000568810.5
CDS TCA 90 bp GAACCAGTGACACAGCTCCAAGGTGGGGCTGGTCACGATAGGAGATaGGGGCGGAACGGACTAAGACAGGCCCGGCCCGAGGTCGCCCAG +
Preference number: 5 (lower is better)
Translates to: EPVTQLQGGAGHDRR*GRNGLRQARPEVAQ
Trigger: CTGGGCGACCTCGGGCCGGGCCTGTCTTAGTCCGTTCCGCCCTCATCTCCTATCGTGACCAGCCCCACCTTGGAGCTGTGTCACTGGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566749.5
CDS TCA 90 bp TCACCAGTGACACAGCTCCAAGGTGGGGCTGGTCACGATAGGAGATaGGGGCGGAACGGACTAAGACAGGCCCGGCCCGAGGTCGCCCAG +
Preference number: 5 (lower is better)
Translates to: SPVTQLQGGAGHDRR*GRNGLRQARPEVAQ
Trigger: CTGGGCGACCTCGGGCCGGGCCTGTCTTAGTCCGTTCCGCCCTCATCTCCTATCGTGACCAGCCCCACCTTGGAGCTGTGTCACTGGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000564966.5
ENST00000567828.1
ENST00000568810.5
CDS GCA 90 bp AGGGCCTTGACTTCGCTCTCCTTGATGAGCTCGCAGCGACGCAGCTaGTCGATCTGCCGGTCCAGGTCGCTGATCTCCGCCATGGCCCAC +
Preference number: 5 (lower is better)
Translates to: RALTSLSLMSSQRRS*SICRSRSLISAMAH
Trigger: GTGGGCCATGGCGGAGATCAGCGACCTGGACCGGCAGATCGAGCAGCTGCGTCGCTGCGAGCTCATCAAGGAGAGCGAAGTCAAGGCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000562222.5
ENST00000562664.5
ENST00000563200.5
ENST00000563597.5
ENST00000563732.5
ENST00000564966.5
ENST00000566749.5
ENST00000567040.5
ENST00000567642.1
ENST00000567828.1
ENST00000568810.5
ENST00000627746.2
CDS-3UTR CAA 90 bp CCTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGAAGGGTTGTCGGCCACGGGCTTCTaGGAGGGGATGCCCCGTGTC +
Preference number: 5 (lower is better)
Translates to: PPSEEDGRVTVVRGPEGLSATGF*EGMPRV
Trigger: GACACGGGGCATCCCCTCCAAGAAGCCCGTGGCCGA...CAACCCTTCTGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CAA 90 bp CTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGAAGGGTTGGTCGGCCACGGGCTTCTaGGAGGGGATGCCCCGTGTC +
Preference number: 5 (lower is better)
Translates to: LRLRKMAESQWCEGQKGWSATGF*EGMPRV
Trigger: GACACGGGGCATCCCCTCCAAGAAGCCCGTGGCCGA...CCAACCCTTCTGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS TCA 90 bp GCCTCTCCCACCAGTGGCATCAATGACCTGCCACATTCGCAACAGTaGGCCTCTGCCCCTCCCAGAATGCTGCCCCGCTGGCCTCAACCC +
Preference number: 5 (lower is better)
Translates to: ASPTSGINDLPHSQQ*ASAPPRMLPRWPQP
Trigger: GGGTTGAGGCCAGCGGGGCAGCATTCTGGGAGGGGCAGAGGCTCACTGTTGCGAATGTGGCAGGTCATTGATGCCACTGGTGGGAGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564966.5
ENST00000568810.5
CDS-3UTR CAA 90 bp CCCACGCCCAGCCTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCTTGACTTCGCTCTCCTaGATGAGCTCGCAGCGACGC +
Preference number: 5 (lower is better)
Translates to: PTPSLRLRKMAESQWCEGLTSLS*MSSQRR
Trigger: GCGTCGCTGCGAGCTCATCAAGGAGAGCGAAGTCAA...GCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAGGCTGGGCGTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CAA 90 bp ACTGGGCCACCACGTCACTGCCAAATAGGTAGCCGGCTCCTCGGGGGCTCACGCTGGCGACTCTCATGGTaGCCCCGGATCAGTGTGATG +
Preference number: 5 (lower is better)
Translates to: TGPPRHCQIGSRLLGGSRWRLSW*PRISVM
Trigger: CATCACACTGATCCGGGGCAACCATGAGAGTCGCCA...GCGTGAGCCCCCGAGGAGCCGGCTACCTATTTGGCAGTGACGTGGTGGCCCAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000563732.5
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CAA 90 bp CCCACGCCCAGCCTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCGATGCCCCGTGTCTCTaGGGGAGCAGCCTCAAAGAT +
Preference number: 5 (lower is better)
Translates to: PTPSLRLRKMAESQWCEGDAPCL*GSSLKD
Trigger: ATCTTTGAGGCTGCTCCCCAAGAGACACGGGGCATC...GCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAGGCTGGGCGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CAA 90 bp CCTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGAAGGGTTGCCTCGAAGCACCCTCTaGGGGGACAGCAGAGCCAGG +
Preference number: 5 (lower is better)
Translates to: PPSEEDGRVTVVRGPEGLPRSTL*GDSRAR
Trigger: CCTGGCTCTGCTGTCCCCCAAGAGGGTGCTTCGAGG...CAACCCTTCTGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CAA 90 bp CTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGAAGGGTTGGCCTCGAAGCACCCTCTaGGGGGACAGCAGAGCCAGG +
Preference number: 5 (lower is better)
Translates to: LRLRKMAESQWCEGQKGWPRSTL*GDSRAR
Trigger: CCTGGCTCTGCTGTCCCCCAAGAGGGTGCTTCGAGG...CCAACCCTTCTGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CAA 90 bp CTTGCTTTCGGTCGATTGTCCGAATCTGATCCAGGGTCTGGATGGAGGGGGAGACCGAGGTCGCCCAGGTaGGGGGTGCAGAAGCCGGGG +
Preference number: 5 (lower is better)
Translates to: LAFGRLSESDPGSGWRGRPRSPR*GVQKPG
Trigger: CCCCGGCTTCTGCACCCCCAACCTGGGCGACCTCGG...TCTCCCCCTCCATCCAGACCCTGGATCAGATTCGGACAATCGACCGAAAGCAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000566749.5
CDS GCA 90 bp TCTCTGACCTCCTCGTGCCCGCCAGCCTGCCATCCTCACAACCACTaGCCAGCACACTCCTGGCACCTCTTGCCTGAATCGTGTGGCATC +
Preference number: 5 (lower is better)
Translates to: SLTSSCPPACHPHNH*PAHSWHLLPESCGI
Trigger: GATGCCACACGATTCAGGCAAGAGGTGCCAGGAGTGTGCTGGGCAGTGGTTGTGAGGATGGCAGGCTGGCGGGCACGAGGAGGTCAGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564966.5
ENST00000568810.5
CDS-3UTR CAA 90 bp CCCACGCCCAGCCTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCTTAGCGCACAGGGCCTaGACTTCGCTCTCCTTGATG +
Preference number: 5 (lower is better)
Translates to: PTPSLRLRKMAESQWCEGLAHRA*TSLSLM
Trigger: CATCAAGGAGAGCGAAGTCAAGGCCCTGTGCGCTAA...GCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAGGCTGGGCGTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CAA 90 bp CACGCCCAGCCTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCATGGCGACTCTCATGGTaGCCCCGGATCAGTGTGATG +
Preference number: 5 (lower is better)
Translates to: HAQPPSEEDGRVTVVRGPWRLSW*PRISVM
Trigger: CATCACACTGATCCGGGGCAACCATGAGAGTCGCCA...TGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAGGCTGGGCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CAA 90 bp GAGGTCACACATGGGCCCATCATGAGGCACCTCTTGCTTTCGGTCGATTGTCCGTCGGCCACGGGCTTCTaGGAGGGGATGCCCCGTGTC +
Preference number: 5 (lower is better)
Translates to: EVTHGPIMRHLLLSVDCPSATGF*EGMPRV
Trigger: GACACGGGGCATCCCCTCCAAGAAGCCCGTGGCCGA...CGGACAATCGACCGAAAGCAAGAGGTGCCTCATGATGGGCCCATGTGTGACCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566749.5
ENST00000627746.2
CDS CCA 90 bp GCGAGTCCACCCTCTGCACGTTGCTCTCCTCTACCAAGATCTCTCTaGAGACAGGAGAAGACCAGGGTCACCACAGCCAGGCCAGCCCAG +
Preference number: 5 (lower is better)
Translates to: ASPPSARCSPLPRSL*RQEKTRVTTARPAQ
Trigger: CTGGGCTGGCCTGGCTGTGGTGACCCTGGTCTTCTCCTGTCTCCAGAGAGATCTTGGTAGAGGAGAGCAACGTGCAGAGGGTGGACTCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563597.5
CDS-3UTR CAA 90 bp CCCACGCCCAGCCTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCTGCACGCAGAAGATCTaGCCATCGATGATGGCTGAC +
Preference number: 5 (lower is better)
Translates to: PTPSLRLRKMAESQWCEGCTQKI*PSMMAD
Trigger: GTCAGCCATCATCGATGGCAAGATCTTCTGCGTGCA...GCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAGGCTGGGCGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CAA 90 bp CCCACGCCCAGCCTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCATCATGAGGCACCTCTaGCTTTCGGTCGATTGTCCG +
Preference number: 5 (lower is better)
Translates to: PTPSLRLRKMAESQWCEGIMRHL*LSVDCP
Trigger: CGGACAATCGACCGAAAGCAAGAGGTGCCTCATGAT...GCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAGGCTGGGCGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CAA 90 bp CACGCCCAGCCTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAATGTCATTGGCTGCGTaGAACTGGGCCACCACGTCA +
Preference number: 5 (lower is better)
Translates to: HAQPPSEEDGRVTVVRGPMSLAA*NWATTS
Trigger: TGACGTGGTGGCCCAGTTCAACGCAGCCAATGACAT...TGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAGGCTGGGCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CAA 90 bp CACGCCCAGCCTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAACCTTCCATCACCAGTaGGTGGGCACGGCAGATCAT +
Preference number: 5 (lower is better)
Translates to: HAQPPSEEDGRVTVVRGPTFHHQ*VGTADH
Trigger: ATGATCTGCCGTGCCCACCAACTGGTGATGGAAGGT...TGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAGGCTGGGCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CAA 90 bp CCACACAGTCACCGAGCCGTACTTGCGCAGGCACTCATCGTAGAAGCCATAGACCCTCGAAGCACCCTCTaGGGGGACAGCAGAGCCAGG +
Preference number: 5 (lower is better)
Translates to: PHSHRAVLAQALIVEAIDPRSTL*GDSRAR
Trigger: CCTGGCTCTGCTGTCCCCCAAGAGGGTGCTTCGAGG...GTCTATGGCTTCTACGATGAGTGCCTGCGCAAGTACGGCTCGGTGACTGTGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CAA 90 bp TCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGAAGGGTTGGAGGGGTTGACTTCGCTCTCCTaGATGAGCTCGCAGCGACGC +
Preference number: 5 (lower is better)
Translates to: SEEDGRVTVVRGPEGLEGLTSLS*MSSQRR
Trigger: GCGTCGCTGCGAGCTCATCAAGGAGAGCGAAGTCAA...CCCCTCCAACCCTTCTGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CAA 90 bp CCACCACGTCACTGCCAAATAGGTAGCCGGCTCCTCGGGGGCTCACGCCCCAGCTTTGAGGTCATAGAATaGTCCATGGATGTCGCCGCA +
Preference number: 5 (lower is better)
Translates to: PPRHCQIGSRLLGGSRPSFEVIE*SMDVAA
Trigger: TGCGGCGACATCCATGGACAATTCTATGACCTCAAA...GCTGGGGCGTGAGCCCCCGAGGAGCCGGCTACCTATTTGGCAGTGACGTGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000563732.5
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CAA 90 bp TCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGAAGGGTTGGAGGGGTGGCGACTCTCATGGTaGCCCCGGATCAGTGTGATG +
Preference number: 5 (lower is better)
Translates to: SEEDGRVTVVRGPEGLEGWRLSW*PRISVM
Trigger: CATCACACTGATCCGGGGCAACCATGAGAGTCGCCA...CCCCTCCAACCCTTCTGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CAA 90 bp CACGCCCAGCCTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCATGCACGCAGAAGATCTaGCCATCGATGATGGCTGAC +
Preference number: 5 (lower is better)
Translates to: HAQPPSEEDGRVTVVRGPCTQKI*PSMMAD
Trigger: GTCAGCCATCATCGATGGCAAGATCTTCTGCGTGCA...TGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAGGCTGGGCGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CAA 90 bp CTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGAAGGGTTGGGATGCCCCGTGTCTCTaGGGGAGCAGCCTCAAAGAT +
Preference number: 5 (lower is better)
Translates to: LRLRKMAESQWCEGQKGWDAPCL*GSSLKD
Trigger: ATCTTTGAGGCTGCTCCCCAAGAGACACGGGGCATC...CCAACCCTTCTGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CAA 90 bp TCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGAAGGGTTGGAGGGGGATGCCCCGTGTCTCTaGGGGAGCAGCCTCAAAGAT +
Preference number: 5 (lower is better)
Translates to: SEEDGRVTVVRGPEGLEGDAPCL*GSSLKD
Trigger: ATCTTTGAGGCTGCTCCCCAAGAGACACGGGGCATC...CCCCTCCAACCCTTCTGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS TCA 90 bp CTGAAAGACCAGGCCTGGCTCTGCAGGGACAGCAGGTACTCACTGTaGCTGGCGAGTCCACCCTCTGCACGTTGCTCTCCTCTACCAAGA +
Preference number: 5 (lower is better)
Translates to: LKDQAWLCRDSRYSL*LASPPSARCSPLPR
Trigger: TCTTGGTAGAGGAGAGCAACGTGCAGAGGGTGGACTCGCCAGTCACAGTGAGTACCTGCTGTCCCTGCAGAGCCAGGCCTGGTCTTTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567642.1
CDS GCA 90 bp CTGCAGGGACAGCAGGTACTCACTGTGACTGGCGAGTCCACCCTCTaGACGTTGCTCTCCTCTACCAAGATCTCTCTGGCCTTAGCGCAC +
Preference number: 5 (lower is better)
Translates to: LQGQQVLTVTGESTL*TLLSSTKISLALAH
Trigger: GTGCGCTAAGGCCAGAGAGATCTTGGTAGAGGAGAGCAACGTGCAGAGGGTGGACTCGCCAGTCACAGTGAGTACCTGCTGTCCCTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567642.1
CDS CCA 90 bp AAGACCAGGCCTGGCTCTGCAGGGACAGCAGGTACTCACTGTGACTaGCGAGTCCACCCTCTGCACGTTGCTCTCCTCTACCAAGATCTC +
Preference number: 5 (lower is better)
Translates to: KTRPGSAGTAGTHCD*RVHPLHVALLYQDL
Trigger: GAGATCTTGGTAGAGGAGAGCAACGTGCAGAGGGTGGACTCGCCAGTCACAGTGAGTACCTGCTGTCCCTGCAGAGCCAGGCCTGGTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567642.1
CDS-3UTR CAA 90 bp CCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGAAGGGTTGGAGTTAGCGCACAGGGCCTaGACTTCGCTCTCCTTGATG +
Preference number: 5 (lower is better)
Translates to: PSEEDGRVTVVRGPEGLELAHRA*TSLSLM
Trigger: CATCAAGGAGAGCGAAGTCAAGGCCCTGTGCGCTAA...CTCCAACCCTTCTGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CAA 90 bp CTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGAAGGGTTGGTTAGCGCACAGGGCCTaGACTTCGCTCTCCTTGATG +
Preference number: 5 (lower is better)
Translates to: LRLRKMAESQWCEGQKGWLAHRA*TSLSLM
Trigger: CATCAAGGAGAGCGAAGTCAAGGCCCTGTGCGCTAA...CCAACCCTTCTGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CAA 90 bp CCTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGAAGGGTTGTCCACCCTCTGCACGTaGCTCTCCTCTACCAAGATC +
Preference number: 5 (lower is better)
Translates to: PPSEEDGRVTVVRGPEGLSTLCT*LSSTKI
Trigger: GATCTTGGTAGAGGAGAGCAACGTGCAGAGGGTGGA...CAACCCTTCTGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
CDS-3UTR CAA 90 bp CTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGAAGGGTTGGTCCACCCTCTGCACGTaGCTCTCCTCTACCAAGATC +
Preference number: 5 (lower is better)
Translates to: LRLRKMAESQWCEGQKGWSTLCT*LSSTKI
Trigger: GATCTTGGTAGAGGAGAGCAACGTGCAGAGGGTGGA...CCAACCCTTCTGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
CDS-3UTR CAA 90 bp CCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGAAGGGTTGGAGTCCACCCTCTGCACGTaGCTCTCCTCTACCAAGATC +
Preference number: 5 (lower is better)
Translates to: PSEEDGRVTVVRGPEGLESTLCT*LSSTKI
Trigger: GATCTTGGTAGAGGAGAGCAACGTGCAGAGGGTGGA...CTCCAACCCTTCTGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
CDS-3UTR CAA 90 bp TGGATGTCGCCGCACACTGTGACTGGCGAGTCCACCCTCTGCACGTTGCTCTCCTGCACGCAGAAGATCTaGCCATCGATGATGGCTGAC +
Preference number: 5 (lower is better)
Translates to: WMSPHTVTGESTLCTLLSCTQKI*PSMMAD
Trigger: GTCAGCCATCATCGATGGCAAGATCTTCTGCGTGCA...GGAGAGCAACGTGCAGAGGGTGGACTCGCCAGTCACAGTGTGCGGCGACATCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563597.5
CDS-3UTR CAA 90 bp GAGGGGGAGAGGCCCCCGTGCACGCAGAAGATCTTGCCATCGATGATGGCTGACCTTGCTTTCGGTCGATaGTCCGAATCTGATCCAGGG +
Preference number: 5 (lower is better)
Translates to: EGERPPCTQKILPSMMADLAFGR*SESDPG
Trigger: CCCTGGATCAGATTCGGACAATCGACCGAAAGCAAG...GTCAGCCATCATCGATGGCAAGATCTTCTGCGTGCACGGGGGCCTCTCCCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000563597.5
ENST00000563732.5
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CAA 90 bp CTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGAAGGGTTGGATGTCATTGGCTGCGTaGAACTGGGCCACCACGTCA +
Preference number: 5 (lower is better)
Translates to: LRLRKMAESQWCEGQKGWMSLAA*NWATTS
Trigger: TGACGTGGTGGCCCAGTTCAACGCAGCCAATGACAT...CCAACCCTTCTGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CAA 90 bp CTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGAAGGGTTGGACCTTCCATCACCAGTaGGTGGGCACGGCAGATCAT +
Preference number: 5 (lower is better)
Translates to: LRLRKMAESQWCEGQKGWTFHHQ*VGTADH
Trigger: ATGATCTGCCGTGCCCACCAACTGGTGATGGAAGGT...CCAACCCTTCTGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS TCA 90 bp GTCCCATGGAGCCCTGGGCTGGCTTACCTTGCCATCGATGATGGCTaGCAGGCTGAGGTAGTCAAAGATCTCAGTGCAGTAGCGCCACAC +
Preference number: 5 (lower is better)
Translates to: VPWSPGLAYLAIDDG*QAEVVKDLSAVAPH
Trigger: GTGTGGCGCTACTGCACTGAGATCTTTGACTACCTCAGCCTGTCAGCCATCATCGATGGCAAGGTAAGCCAGCCCAGGGCTCCATGGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563200.5
ENST00000567040.5
CDS-3UTR CAA 90 bp GAGGTCACACATGGGCCCATCATGAGGCACCTCTTGCTTTCGGTCGATTGTCCGTTGACTTCGCTCTCCTaGATGAGCTCGCAGCGACGC +
Preference number: 5 (lower is better)
Translates to: EVTHGPIMRHLLLSVDCPLTSLS*MSSQRR
Trigger: GCGTCGCTGCGAGCTCATCAAGGAGAGCGAAGTCAA...CGGACAATCGACCGAAAGCAAGAGGTGCCTCATGATGGGCCCATGTGTGACCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563597.5
ENST00000563732.5
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CAA 90 bp CCACACAGTCACCGAGCCGTACTTGCGCAGGCACTCATCGTAGAAGCCATAGACTTGACTTCGCTCTCCTaGATGAGCTCGCAGCGACGC +
Preference number: 5 (lower is better)
Translates to: PHSHRAVLAQALIVEAIDLTSLS*MSSQRR
Trigger: GCGTCGCTGCGAGCTCATCAAGGAGAGCGAAGTCAA...GTCTATGGCTTCTACGATGAGTGCCTGCGCAAGTACGGCTCGGTGACTGTGTGG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563597.5
ENST00000563732.5
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CAA 90 bp GCGCCACACAGTCACCGAGCCGTACTTGCGCAGGCACTCATCGTAGAAGCCATATTAGCGCACAGGGCCTaGACTTCGCTCTCCTTGATG +
Preference number: 5 (lower is better)
Translates to: APHSHRAVLAQALIVEAILAHRA*TSLSLM
Trigger: CATCAAGGAGAGCGAAGTCAAGGCCCTGTGCGCTAA...TATGGCTTCTACGATGAGTGCCTGCGCAAGTACGGCTCGGTGACTGTGTGGCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563597.5
ENST00000563732.5
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CAA 90 bp CACGCCCAGCCTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCATTTGAGGTCATAGAATaGTCCATGGATGTCGCCGCA +
Preference number: 5 (lower is better)
Translates to: HAQPPSEEDGRVTVVRGPFEVIE*SMDVAA
Trigger: TGCGGCGACATCCATGGACAATTCTATGACCTCAAA...TGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAGGCTGGGCGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CAA 90 bp CCTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGAAGGGTTGTGCACGCAGAAGATCTaGCCATCGATGATGGCTGAC +
Preference number: 5 (lower is better)
Translates to: PPSEEDGRVTVVRGPEGLCTQKI*PSMMAD
Trigger: GTCAGCCATCATCGATGGCAAGATCTTCTGCGTGCA...CAACCCTTCTGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CAA 90 bp AGCCTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGAAGGGTCTTGCTTTCGGTCGATaGTCCGAATCTGATCCAGGG +
Preference number: 5 (lower is better)
Translates to: SLRLRKMAESQWCEGQKGLAFGR*SESDPG
Trigger: CCCTGGATCAGATTCGGACAATCGACCGAAAGCAAG...ACCCTTCTGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CAA 90 bp CCTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGAAGGGTTGCTTGCTTTCGGTCGATaGTCCGAATCTGATCCAGGG +
Preference number: 5 (lower is better)
Translates to: PPSEEDGRVTVVRGPEGLLAFGR*SESDPG
Trigger: CCCTGGATCAGATTCGGACAATCGACCGAAAGCAAG...CAACCCTTCTGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CAA 90 bp AGCCTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGAAGGGTATCATGAGGCACCTCTaGCTTTCGGTCGATTGTCCG +
Preference number: 5 (lower is better)
Translates to: SLRLRKMAESQWCEGQKGIMRHL*LSVDCP
Trigger: CGGACAATCGACCGAAAGCAAGAGGTGCCTCATGAT...ACCCTTCTGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CAA 90 bp CCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGAAGGGTTGGAGATCATGAGGCACCTCTaGCTTTCGGTCGATTGTCCG +
Preference number: 5 (lower is better)
Translates to: PSEEDGRVTVVRGPEGLEIMRHL*LSVDCP
Trigger: CGGACAATCGACCGAAAGCAAGAGGTGCCTCATGAT...CTCCAACCCTTCTGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CAA 90 bp GCAGTAGCGCCACACAGTCACCGAGCCGTACTTGCGCAGGCACTCATCGTAGAAACCTTCCATCACCAGTaGGTGGGCACGGCAGATCAT +
Preference number: 5 (lower is better)
Translates to: AVAPHSHRAVLAQALIVETFHHQ*VGTADH
Trigger: ATGATCTGCCGTGCCCACCAACTGGTGATGGAAGGT...TTCTACGATGAGTGCCTGCGCAAGTACGGCTCGGTGACTGTGTGGCGCTACTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CAA 90 bp CAGTCACCGAGCCGTACTTGCGCAGGCACTCATCGTAGAAGCCATAGACCTGCGACCTTCCATCACCAGTaGGTGGGCACGGCAGATCAT +
Preference number: 5 (lower is better)
Translates to: QSPSRTCAGTHRRSHRPATFHHQ*VGTADH
Trigger: ATGATCTGCCGTGCCCACCAACTGGTGATGGAAGGT...CGCAGGTCTATGGCTTCTACGATGAGTGCCTGCGCAAGTACGGCTCGGTGACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CAA 90 bp GGTAGTCAAAGATCTCAGTGCAGTAGCGCCACACAGTCACCGAGCCGTACTTGCTTGACTTCGCTCTCCTaGATGAGCTCGCAGCGACGC +
Preference number: 5 (lower is better)
Translates to: GSQRSQCSSATQSPSRTCLTSLS*MSSQRR
Trigger: GCGTCGCTGCGAGCTCATCAAGGAGAGCGAAGTCAA...GCAAGTACGGCTCGGTGACTGTGTGGCGCTACTGCACTGAGATCTTTGACTACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563597.5
ENST00000563732.5
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CAA 90 bp TGGGCACGGCAGATCATGTCAATGTCATTGGCTGCGTTGAACTGGGCCACCACGTTAGCGCACAGGGCCTaGACTTCGCTCTCCTTGATG +
Preference number: 5 (lower is better)
Translates to: WARQIMSMSLAALNWATTLAHRA*TSLSLM
Trigger: CATCAAGGAGAGCGAAGTCAAGGCCCTGTGCGCTAA...CGTGGTGGCCCAGTTCAACGCAGCCAATGACATTGACATGATCTGCCGTGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563732.5
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CAA 90 bp AGAGGAGGTCACACATGGGCCCATCATGAGGCACCTCTTGCTTTCGGTCGATTGTGGCGACTCTCATGGTaGCCCCGGATCAGTGTGATG +
Preference number: 5 (lower is better)
Translates to: RGGHTWAHHEAPLAFGRLWRLSW*PRISVM
Trigger: CATCACACTGATCCGGGGCAACCATGAGAGTCGCCA...CAATCGACCGAAAGCAAGAGGTGCCTCATGATGGGCCCATGTGTGACCTCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563597.5
ENST00000563732.5
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CAA 90 bp AGATCTCAGTGCAGTAGCGCCACACAGTCACCGAGCCGTACTTGCGCAGGCACTCTTGCTTTCGGTCGATaGTCCGAATCTGATCCAGGG +
Preference number: 5 (lower is better)
Translates to: RSQCSSATQSPSRTCAGTLAFGR*SESDPG
Trigger: CCCTGGATCAGATTCGGACAATCGACCGAAAGCAAG...AGTGCCTGCGCAAGTACGGCTCGGTGACTGTGTGGCGCTACTGCACTGAGATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563597.5
ENST00000563732.5
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CAA 90 bp GAGGTCACACATGGGCCCATCATGAGGCACCTCTTGCTTTCGGTCGATTGTCCGATGTCATTGGCTGCGTaGAACTGGGCCACCACGTCA +
Preference number: 5 (lower is better)
Translates to: EVTHGPIMRHLLLSVDCPMSLAA*NWATTS
Trigger: TGACGTGGTGGCCCAGTTCAACGCAGCCAATGACAT...CGGACAATCGACCGAAAGCAAGAGGTGCCTCATGATGGGCCCATGTGTGACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563732.5
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CAA 90 bp CCACACAGTCACCGAGCCGTACTTGCGCAGGCACTCATCGTAGAAGCCATAGACATGTCATTGGCTGCGTaGAACTGGGCCACCACGTCA +
Preference number: 5 (lower is better)
Translates to: PHSHRAVLAQALIVEAIDMSLAA*NWATTS
Trigger: TGACGTGGTGGCCCAGTTCAACGCAGCCAATGACAT...GTCTATGGCTTCTACGATGAGTGCCTGCGCAAGTACGGCTCGGTGACTGTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563732.5
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CAA 90 bp TCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGAAGGGTTGGAGGGGATCATGTCAATGTCATaGGCTGCGTTGAACTGGGCC +
Preference number: 5 (lower is better)
Translates to: SEEDGRVTVVRGPEGLEGIMSMS*AALNWA
Trigger: GGCCCAGTTCAACGCAGCCAATGACATTGACATGAT...CCCCTCCAACCCTTCTGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CAA 90 bp CCTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGAAGGGTTGATCATGTCAATGTCATaGGCTGCGTTGAACTGGGCC +
Preference number: 5 (lower is better)
Translates to: PPSEEDGRVTVVRGPEGLIMSMS*AALNWA
Trigger: GGCCCAGTTCAACGCAGCCAATGACATTGACATGAT...CAACCCTTCTGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CAA 90 bp CTCCGTCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGAAGGGTTGGATCATGTCAATGTCATaGGCTGCGTTGAACTGGGCC +
Preference number: 5 (lower is better)
Translates to: LRLRKMAESQWCEGQKGWIMSMS*AALNWA
Trigger: GGCCCAGTTCAACGCAGCCAATGACATTGACATGAT...CCAACCCTTCTGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGACGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CAA 90 bp CTCTTGCTTTCGGTCGATTGTCCGAATCTGATCCAGGGTCTGGATGGAGGGGGAGATGCCCCGTGTCTCTaGGGGAGCAGCCTCAAAGAT +
Preference number: 5 (lower is better)
Translates to: LLLSVDCPNLIQGLDGGGDAPCL*GSSLKD
Trigger: ATCTTTGAGGCTGCTCCCCAAGAGACACGGGGCATC...TCCCCCTCCATCCAGACCCTGGATCAGATTCGGACAATCGACCGAAAGCAAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CAA 90 bp TGTAACCTTCCATCACCAGTTGGTGGGCACGGCAGATCATGTCAATGTCATTGGCCTCGAAGCACCCTCTaGGGGGACAGCAGAGCCAGG +
Preference number: 5 (lower is better)
Translates to: CNLPSPVGGHGRSCQCHWPRSTL*GDSRAR
Trigger: CCTGGCTCTGCTGTCCCCCAAGAGGGTGCTTCGAGG...CCAATGACATTGACATGATCTGCCGTGCCCACCAACTGGTGATGGAAGGTTACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CAA 90 bp TCTGAGGAAGATGGCAGAGTCACAGTGGTGCGAGGGCCAGAAGGGTTGGAGGGGTTTGAGGTCATAGAATaGTCCATGGATGTCGCCGCA +
Preference number: 5 (lower is better)
Translates to: SEEDGRVTVVRGPEGLEGFEVIE*SMDVAA
Trigger: TGCGGCGACATCCATGGACAATTCTATGACCTCAAA...CCCCTCCAACCCTTCTGGCCCTCGCACCACTGTGACTCTGCCATCTTCCTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CAA 90 bp TGCAGTAGCGCCACACAGTCACCGAGCCGTACTTGCGCAGGCACTCATCGTAGAATCATGTCAATGTCATaGGCTGCGTTGAACTGGGCC +
Preference number: 5 (lower is better)
Translates to: CSSATQSPSRTCAGTHRRIMSMS*AALNWA
Trigger: GGCCCAGTTCAACGCAGCCAATGACATTGACATGAT...TCTACGATGAGTGCCTGCGCAAGTACGGCTCGGTGACTGTGTGGCGCTACTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563732.5
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CAA 90 bp ACACATGGGCCCATCATGAGGCACCTCTTGCTTTCGGTCGATTGTCCGAATCTGTTAGCGCACAGGGCCTaGACTTCGCTCTCCTTGATG +
Preference number: 5 (lower is better)
Translates to: THGPIMRHLLLSVDCPNLLAHRA*TSLSLM
Trigger: CATCAAGGAGAGCGAAGTCAAGGCCCTGTGCGCTAA...CAGATTCGGACAATCGACCGAAAGCAAGAGGTGCCTCATGATGGGCCCATGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563597.5
ENST00000563732.5
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CAA 90 bp TGCAGTAGCGCCACACAGTCACCGAGCCGTACTTGCGCAGGCACTCATCGTAGATTTGAGGTCATAGAATaGTCCATGGATGTCGCCGCA +
Preference number: 5 (lower is better)
Translates to: CSSATQSPSRTCAGTHRRFEVIE*SMDVAA
Trigger: TGCGGCGACATCCATGGACAATTCTATGACCTCAAA...TCTACGATGAGTGCCTGCGCAAGTACGGCTCGGTGACTGTGTGGCGCTACTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563597.5
ENST00000563732.5
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CAA 90 bp CAAAGATCTCAGTGCAGTAGCGCCACACAGTCACCGAGCCGTACTTGCGCAGGCTTTGAGGTCATAGAATaGTCCATGGATGTCGCCGCA +
Preference number: 5 (lower is better)
Translates to: QRSQCSSATQSPSRTCAGFEVIE*SMDVAA
Trigger: TGCGGCGACATCCATGGACAATTCTATGACCTCAAA...GCCTGCGCAAGTACGGCTCGGTGACTGTGTGGCGCTACTGCACTGAGATCTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563597.5
ENST00000563732.5
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CAA 90 bp GTAACCTTCCATCACCAGTTGGTGGGCACGGCAGATCATGTCAATGTCATTGGCTGGCGACTCTCATGGTaGCCCCGGATCAGTGTGATG +
Preference number: 5 (lower is better)
Translates to: VTFHHQLVGTADHVNVIGWRLSW*PRISVM
Trigger: CATCACACTGATCCGGGGCAACCATGAGAGTCGCCA...GCCAATGACATTGACATGATCTGCCGTGCCCACCAACTGGTGATGGAAGGTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CAA 90 bp GCGATCAGGATAGCGAACCTTAAGTGCCAGCAGCAGGAGGAACGTTTCGACGCTATCATGAGGCACCTCTaGCTTTCGGTCGATTGTCCG +
Preference number: 5 (lower is better)
Translates to: AIRIANLKCQQQEERFDAIMRHL*LSVDCP
Trigger: CGGACAATCGACCGAAAGCAAGAGGTGCCTCATGAT...AGCGTCGAAACGTTCCTCCTGCTGCTGGCACTTAAGGTTCGCTATCCTGATCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563597.5
ENST00000563732.5
ENST00000627746.2
CDS-3UTR CAA 90 bp ATCATGAGGCACCTCTTGCTTTCGGTCGATTGTCCGAATCTGATCCAGGGTCTGTCCACCCTCTGCACGTaGCTCTCCTCTACCAAGATC +
Preference number: 5 (lower is better)
Translates to: IMRHLLLSVDCPNLIQGLSTLCT*LSSTKI
Trigger: GATCTTGGTAGAGGAGAGCAACGTGCAGAGGGTGGA...CAGACCCTGGATCAGATTCGGACAATCGACCGAAAGCAAGAGGTGCCTCATGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563597.5
ENST00000566749.5
CDS-3UTR CAA 90 bp TGTAACCTTCCATCACCAGTTGGTGGGCACGGCAGATCATGTCAATGTCATTGGTGGCGACTCTCATGGTaGCCCCGGATCAGTGTGATG +
Preference number: 5 (lower is better)
Translates to: CNLPSPVGGHGRSCQCHWWRLSW*PRISVM
Trigger: CATCACACTGATCCGGGGCAACCATGAGAGTCGCCA...CCAATGACATTGACATGATCTGCCGTGCCCACCAACTGGTGATGGAAGGTTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CAA 90 bp GAGGTAGTCAAAGATCTCAGTGCAGTAGCGCCACACAGTCACCGAGCCGTACTTATCATGAGGCACCTCTaGCTTTCGGTCGATTGTCCG +
Preference number: 5 (lower is better)
Translates to: EVVKDLSAVAPHSHRAVLIMRHL*LSVDCP
Trigger: CGGACAATCGACCGAAAGCAAGAGGTGCCTCATGAT...AAGTACGGCTCGGTGACTGTGTGGCGCTACTGCACTGAGATCTTTGACTACCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563597.5
ENST00000563732.5
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CAA 90 bp CACCGTCTCATTGAAGTGCCACTTGTAACCTTCCATCACCAGTTGGTGGGCACGATCATGAGGCACCTCTaGCTTTCGGTCGATTGTCCG +
Preference number: 5 (lower is better)
Translates to: HRLIEVPLVTFHHQLVGTIMRHL*LSVDCP
Trigger: CGGACAATCGACCGAAAGCAAGAGGTGCCTCATGAT...CGTGCCCACCAACTGGTGATGGAAGGTTACAAGTGGCACTTCAATGAGACGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CAA 90 bp ATCATGAGGCACCTCTTGCTTTCGGTCGATTGTCCGAATCTGATCCAGGGTCTGCTTGCTTTCGGTCGATaGTCCGAATCTGATCCAGGG +
Preference number: 5 (lower is better)
Translates to: IMRHLLLSVDCPNLIQGLLAFGR*SESDPG
Trigger: CCCTGGATCAGATTCGGACAATCGACCGAAAGCAAG...CAGACCCTGGATCAGATTCGGACAATCGACCGAAAGCAAGAGGTGCCTCATGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563597.5
ENST00000563732.5
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CAA 90 bp ACATGGGCCCATCATGAGGCACCTCTTGCTTTCGGTCGATTGTCCGAATCTGATCTTGCTTTCGGTCGATaGTCCGAATCTGATCCAGGG +
Preference number: 5 (lower is better)
Translates to: TWAHHEAPLAFGRLSESDLAFGR*SESDPG
Trigger: CCCTGGATCAGATTCGGACAATCGACCGAAAGCAAG...ATCAGATTCGGACAATCGACCGAAAGCAAGAGGTGCCTCATGATGGGCCCATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563597.5
ENST00000563732.5
ENST00000566749.5
ENST00000627746.2
CDS-3UTR CAA 90 bp GAGGTAGTCAAAGATCTCAGTGCAGTAGCGCCACACAGTCACCGAGCCGTACTTATCATGTCAATGTCATaGGCTGCGTTGAACTGGGCC +
Preference number: 5 (lower is better)
Translates to: EVVKDLSAVAPHSHRAVLIMSMS*AALNWA
Trigger: GGCCCAGTTCAACGCAGCCAATGACATTGACATGAT...AAGTACGGCTCGGTGACTGTGTGGCGCTACTGCACTGAGATCTTTGACTACCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563732.5
ENST00000566749.5
ENST00000627746.2
CDS TCA 90 bp GGACAGATAAAAGAGCTTAGGGTTGGGCTTATAGAGCCCCCAAGATaGAGAGGAAACTTCATGTGCCTGAAAGACCAGGCCTGGCTCTGC +
Preference number: 5 (lower is better)
Translates to: GQIKELRVGLIEPPR*RGNFMCLKDQAWLC
Trigger: GCAGAGCCAGGCCTGGTCTTTCAGGCACATGAAGTTTCCTCTTCATCTTGGGGGCTCTATAAGCCCAACCCTAAGCTCTTTTATCTGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567642.1
CDS CCA 72 bp GGGCCGCCGCCCCCTCCGCACCGCACAGGGGTCTCCTaGGAAAGGCCAAGACGAGCCCGCGGATCAGTGTCC +
Preference number: 6 (lower is better)
Translates to: GPPPPPHRTGVS*ERPRRARGSVS
Trigger: GGACACTGATCCGCGGGCTCGTCTTGGCCTTTCCCAGGAGACCCCTGTGCGGTGCGGAGGGGGCGGCGGCCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561610.1
ENST00000567828.1
CDS TCA 72 bp AGCGACGCAGCTGCTCGATCTGCCGGTCCAGGTCGCTaGTCTCCGCCATGGCCCACCCCCGGCGCGGGTCAG +
Preference number: 6 (lower is better)
Translates to: SDAAARSAGPGR*SPPWPTPGAGQ
Trigger: CTGACCCGCGCCGGGGGTGGGCCATGGCGGAGATCAGCGACCTGGACCGGCAGATCGAGCAGCTGCGTCGCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000562222.5
ENST00000562664.5
ENST00000563200.5
ENST00000563597.5
ENST00000563732.5
ENST00000564966.5
ENST00000566749.5
ENST00000567040.5
ENST00000567642.1
ENST00000567828.1
ENST00000568810.5
ENST00000627746.2
CDS GCA 72 bp CGCCGCTGCGACTCCGGTTCCGGCTCTCCGGCTCCCTaGCTCCCTCTTTCACTCCGCTTTCGACCGCCGCCG +
Preference number: 6 (lower is better)
Translates to: RRCDSGSGSPAP*LPLSLRFRPPP
Trigger: CGGCGGCGGTCGAAAGCGGAGTGAAAGAGGGAGGCAGGGAGCCGGAGAGCCGGAACCGGAGTCGCAGCGGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279387.12
ENST00000562664.5
ENST00000563200.5
ENST00000563597.5
ENST00000563732.5
ENST00000564966.5
ENST00000566749.5
ENST00000567040.5
ENST00000568810.5
ENST00000627746.2
CDS CAA 90 bp GCCGCACACCTGGCCTTAGCGCACAGGGCCTTGACTTCGCTCTCCTaGATGAGCTCGCAGCGACGCAGCTGCTCGATCTGCCGGTCCAGG +
Preference number: 6 (lower is better)
Translates to: AAHLALAHRALTSLS*MSSQRRSCSICRSR
Trigger: CCTGGACCGGCAGATCGAGCAGCTGCGTCGCTGCGAGCTCATCAAGGAGAGCGAAGTCAAGGCCCTGTGCGCTAAGGCCAGGTGTGCGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563732.5
ENST00000564966.5
ENST00000567828.1
ENST00000627746.2
CDS GCA 72 bp TCCTTGATGAGCTCGCAGCGACGCAGCTGCTCGATCTaGCGGTCCAGGTCGCTGATCTCCGCCATGGCCCAC +
Preference number: 6 (lower is better)
Translates to: SLMSSQRRSCSI*RSRSLISAMAH
Trigger: GTGGGCCATGGCGGAGATCAGCGACCTGGACCGGCAGATCGAGCAGCTGCGTCGCTGCGAGCTCATCAAGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000562222.5
ENST00000562664.5
ENST00000563200.5
ENST00000563597.5
ENST00000563732.5
ENST00000564966.5
ENST00000566749.5
ENST00000567040.5
ENST00000567642.1
ENST00000567828.1
ENST00000568810.5
ENST00000627746.2
CDS TCA 72 bp ACACAGCTCCAAGGTGGGGCTGGTCACGATAGGAGATaGGGGCGGAACGGACTAAGACAGGCCCGGCCCGAG +
Preference number: 6 (lower is better)
Translates to: TQLQGGAGHDRR*GRNGLRQARPE
Trigger: CTCGGGCCGGGCCTGTCTTAGTCCGTTCCGCCCTCATCTCCTATCGTGACCAGCCCCACCTTGGAGCTGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000564966.5
ENST00000566749.5
ENST00000567828.1
ENST00000568810.5
CDS GCA 72 bp ACTTCGCTCTCCTTGATGAGCTCGCAGCGACGCAGCTaGTCGATCTGCCGGTCCAGGTCGCTGATCTCCGCC +
Preference number: 6 (lower is better)
Translates to: TSLSLMSSQRRS*SICRSRSLISA
Trigger: GGCGGAGATCAGCGACCTGGACCGGCAGATCGAGCAGCTGCGTCGCTGCGAGCTCATCAAGGAGAGCGAAGT
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000562222.5
ENST00000562664.5
ENST00000563200.5
ENST00000563597.5
ENST00000563732.5
ENST00000564966.5
ENST00000566749.5
ENST00000567040.5
ENST00000567642.1
ENST00000567828.1
ENST00000568810.5
ENST00000627746.2
CDS GCA 72 bp GACGGTCTCTCCACACATCCCTCTCTGACCTCCTCGTaGCCGCCAGCCTGCCATCCTCACAACCACTGCCCA +
Preference number: 6 (lower is better)
Translates to: DGLSTHPSLTSS*PPACHPHNHCP
Trigger: TGGGCAGTGGTTGTGAGGATGGCAGGCTGGCGGGCACGAGGAGGTCAGAGAGGGATGTGTGGAGAGACCGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564966.5
ENST00000568810.5
CDS CAA 72 bp GATGTCGCCGCACACCTGGCCTTAGCGCACAGGGCCTaGACTTCGCTCTCCTTGATGAGCTCGCAGCGACGC +
Preference number: 6 (lower is better)
Translates to: DVAAHLALAHRA*TSLSLMSSQRR
Trigger: GCGTCGCTGCGAGCTCATCAAGGAGAGCGAAGTCAAGGCCCTGTGCGCTAAGGCCAGGTGTGCGGCGACATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563732.5
ENST00000564966.5
ENST00000567828.1
ENST00000627746.2
CDS CAA 90 bp ATTCCTGACCTGGCCTTAGCGCACAGGGCCTTGACTTCGCTCTCCTaGATGAGCTCGCAGCGACGCAGCTGCTCGATCTGCCGGTCCAGG +
Preference number: 6 (lower is better)
Translates to: IPDLALAHRALTSLS*MSSQRRSCSICRSR
Trigger: CCTGGACCGGCAGATCGAGCAGCTGCGTCGCTGCGAGCTCATCAAGGAGAGCGAAGTCAAGGCCCTGTGCGCTAAGGCCAGGTCAGGAAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563597.5
CDS TCA 72 bp CAACCACTGCCCAGCACACTCCTGGCACCTCTTGCCTaGATCGTGTGGCATCAGCCACCTCCCAGGCCCACA +
Preference number: 6 (lower is better)
Translates to: QPLPSTLLAPLA*IVWHQPPPRPT
Trigger: TGTGGGCCTGGGAGGTGGCTGATGCCACACGATTCAGGCAAGAGGTGCCAGGAGTGTGCTGGGCAGTGGTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564966.5
ENST00000568810.5
CDS TCA 72 bp CAGGCCTGGCTCTGCAGGGACAGCAGGTACTCACTGTaGCTGGCGAGTCCACCCTCTGCACGTTGCTCTCCT +
Preference number: 6 (lower is better)
Translates to: QAWLCRDSRYSL*LASPPSARCSP
Trigger: AGGAGAGCAACGTGCAGAGGGTGGACTCGCCAGTCACAGTGAGTACCTGCTGTCCCTGCAGAGCCAGGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567642.1
CDS CAA 72 bp CTGGCCTTAGCGCACAGGGCCTTGACTTCGCTCTCCTaGATGAGCTCGCAGCGACGCAGCTGCTCGATCTGC +
Preference number: 6 (lower is better)
Translates to: LALAHRALTSLS*MSSQRRSCSIC
Trigger: GCAGATCGAGCAGCTGCGTCGCTGCGAGCTCATCAAGGAGAGCGAAGTCAAGGCCCTGTGCGCTAAGGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000562222.5
ENST00000562664.5
ENST00000563200.5
ENST00000563597.5
ENST00000563732.5
ENST00000564966.5
ENST00000566749.5
ENST00000567040.5
ENST00000567642.1
ENST00000567828.1
ENST00000568810.5
ENST00000627746.2
CDS CAA 90 bp AAGATCTCTCTGGCCTTAGCGCACAGGGCCTTGACTTCGCTCTCCTaGATGAGCTCGCAGCGACGCAGCTGCTCGATCTGCCGGTCCAGG +
Preference number: 6 (lower is better)
Translates to: KISLALAHRALTSLS*MSSQRRSCSICRSR
Trigger: CCTGGACCGGCAGATCGAGCAGCTGCGTCGCTGCGAGCTCATCAAGGAGAGCGAAGTCAAGGCCCTGTGCGCTAAGGCCAGAGAGATCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000562222.5
ENST00000562664.5
ENST00000563200.5
ENST00000566749.5
ENST00000567040.5
ENST00000567642.1
ENST00000568810.5
CDS CAA 90 bp TGGATGTCGCCGCACACTGTGACTGGCGAGTCCACCCTCTGCACGTaGCTCTCCTCTACCAAGATCTCTCTGGCCTTAGCGCACAGGGCC +
Preference number: 6 (lower is better)
Translates to: WMSPHTVTGESTLCT*LSSTKISLALAHRA
Trigger: GGCCCTGTGCGCTAAGGCCAGAGAGATCTTGGTAGAGGAGAGCAACGTGCAGAGGGTGGACTCGCCAGTCACAGTGTGCGGCGACATCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000562222.5
ENST00000562664.5
ENST00000563200.5
ENST00000566749.5
ENST00000567040.5
ENST00000568810.5
CDS TCA 72 bp ACCAGTGGCATCAATGACCTGCCACATTCGCAACAGTaGGCCTCTGCCCCTCCCAGAATGCTGCCCCGCTGG +
Preference number: 6 (lower is better)
Translates to: TSGINDLPHSQQ*ASAPPRMLPRW
Trigger: CCAGCGGGGCAGCATTCTGGGAGGGGCAGAGGCTCACTGTTGCGAATGTGGCAGGTCATTGATGCCACTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564966.5
ENST00000568810.5
CDS CCA 72 bp CCTGGCTCTGCAGGGACAGCAGGTACTCACTGTGACTaGCGAGTCCACCCTCTGCACGTTGCTCTCCTCTAC +
Preference number: 6 (lower is better)
Translates to: PGSAGTAGTHCD*RVHPLHVALLY
Trigger: GTAGAGGAGAGCAACGTGCAGAGGGTGGACTCGCCAGTCACAGTGAGTACCTGCTGTCCCTGCAGAGCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567642.1
CDS CAA 90 bp GGACAGCAGGTACTCACTGTGACTGGCGAGTCCACCCTCTGCACGTaGCTCTCCTCTACCAAGATCTCTCTGGCCTTAGCGCACAGGGCC +
Preference number: 6 (lower is better)
Translates to: GQQVLTVTGESTLCT*LSSTKISLALAHRA
Trigger: GGCCCTGTGCGCTAAGGCCAGAGAGATCTTGGTAGAGGAGAGCAACGTGCAGAGGGTGGACTCGCCAGTCACAGTGAGTACCTGCTGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567642.1
CDS GCA 72 bp ATGTCGCCGCACACTGTGACTGGCGAGTCCACCCTCTaGACGTTGCTCTCCTCTACCAAGATCTCTCTGGCC +
Preference number: 6 (lower is better)
Translates to: MSPHTVTGESTL*TLLSSTKISLA
Trigger: GGCCAGAGAGATCTTGGTAGAGGAGAGCAACGTGCAGAGGGTGGACTCGCCAGTCACAGTGTGCGGCGACAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000562222.5
ENST00000562664.5
ENST00000563200.5
ENST00000566749.5
ENST00000567040.5
ENST00000568810.5
CDS CAA 72 bp CCGCACACTGTGACTGGCGAGTCCACCCTCTGCACGTaGCTCTCCTCTACCAAGATCTCTCTGGCCTTAGCG +
Preference number: 6 (lower is better)
Translates to: PHTVTGESTLCT*LSSTKISLALA
Trigger: CGCTAAGGCCAGAGAGATCTTGGTAGAGGAGAGCAACGTGCAGAGGGTGGACTCGCCAGTCACAGTGTGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000562222.5
ENST00000562664.5
ENST00000563200.5
ENST00000566749.5
ENST00000567040.5
ENST00000568810.5
CDS CAA 90 bp TGGATGTCGCCGCACACTGTGACTGGCGAGTCCACCCTCTGCACGTaGCTCTCCTCTACCAAGATCTCTCTGGAGACAGGAGAAGACCAG +
Preference number: 6 (lower is better)
Translates to: WMSPHTVTGESTLCT*LSSTKISLETGEDQ
Trigger: CTGGTCTTCTCCTGTCTCCAGAGAGATCTTGGTAGAGGAGAGCAACGTGCAGAGGGTGGACTCGCCAGTCACAGTGTGCGGCGACATCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563597.5
CDS GCA 72 bp ATGTCGCCGCACACTGTGACTGGCGAGTCCACCCTCTaGACGTTGCTCTCCTCTACCAAGATCTCTCTGGAG +
Preference number: 6 (lower is better)
Translates to: MSPHTVTGESTL*TLLSSTKISLE
Trigger: CTCCAGAGAGATCTTGGTAGAGGAGAGCAACGTGCAGAGGGTGGACTCGCCAGTCACAGTGTGCGGCGACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563597.5
CDS GCA 72 bp CAGCAGGTACTCACTGTGACTGGCGAGTCCACCCTCTaGACGTTGCTCTCCTCTACCAAGATCTCTCTGGCC +
Preference number: 6 (lower is better)
Translates to: QQVLTVTGESTL*TLLSSTKISLA
Trigger: GGCCAGAGAGATCTTGGTAGAGGAGAGCAACGTGCAGAGGGTGGACTCGCCAGTCACAGTGAGTACCTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567642.1
CDS CAA 72 bp TCTACCAAGATCTCTCTGGCCTTAGCGCACAGGGCCTaGACTTCGCTCTCCTTGATGAGCTCGCAGCGACGC +
Preference number: 6 (lower is better)
Translates to: STKISLALAHRA*TSLSLMSSQRR
Trigger: GCGTCGCTGCGAGCTCATCAAGGAGAGCGAAGTCAAGGCCCTGTGCGCTAAGGCCAGAGAGATCTTGGTAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000279387.12
ENST00000561610.1
ENST00000562222.5
ENST00000562664.5
ENST00000563200.5
ENST00000566749.5
ENST00000567040.5
ENST00000567642.1
ENST00000568810.5
CDS CAA 72 bp CCGCACACTGTGACTGGCGAGTCCACCCTCTGCACGTaGCTCTCCTCTACCAAGATCTCTCTGGAGACAGGA +
Preference number: 6 (lower is better)
Translates to: PHTVTGESTLCT*LSSTKISLETG
Trigger: TCCTGTCTCCAGAGAGATCTTGGTAGAGGAGAGCAACGTGCAGAGGGTGGACTCGCCAGTCACAGTGTGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563597.5
CDS CAA 72 bp GTACTCACTGTGACTGGCGAGTCCACCCTCTGCACGTaGCTCTCCTCTACCAAGATCTCTCTGGCCTTAGCG +
Preference number: 6 (lower is better)
Translates to: VLTVTGESTLCT*LSSTKISLALA
Trigger: CGCTAAGGCCAGAGAGATCTTGGTAGAGGAGAGCAACGTGCAGAGGGTGGACTCGCCAGTCACAGTGAGTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567642.1
CDS TCA 72 bp AGCCCTGGGCTGGCTTACCTTGCCATCGATGATGGCTaGCAGGCTGAGGTAGTCAAAGATCTCAGTGCAGTA +
Preference number: 6 (lower is better)
Translates to: SPGLAYLAIDDG*QAEVVKDLSAV
Trigger: TACTGCACTGAGATCTTTGACTACCTCAGCCTGTCAGCCATCATCGATGGCAAGGTAAGCCAGCCCAGGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563200.5
ENST00000567040.5
CDS CAA 72 bp GCCACCTACTCTGAACAGCTCTTTGAGGTCATAGAATaGTCCATGGATGTCGCCGCACACCTGGCCTTAGCG +
Preference number: 6 (lower is better)
Translates to: ATYSEQLFEVIE*SMDVAAHLALA
Trigger: CGCTAAGGCCAGGTGTGCGGCGACATCCATGGACAATTCTATGACCTCAAAGAGCTGTTCAGAGTAGGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563732.5
ENST00000564966.5
ENST00000567828.1
ENST00000627746.2
CDS TCA 72 bp AAAGAGCTTAGGGTTGGGCTTATAGAGCCCCCAAGATaGAGAGGAAACTTCATGTGCCTGAAAGACCAGGCC +
Preference number: 6 (lower is better)
Translates to: KELRVGLIEPPR*RGNFMCLKDQA
Trigger: GGCCTGGTCTTTCAGGCACATGAAGTTTCCTCTTCATCTTGGGGGCTCTATAAGCCCAACCCTAAGCTCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567642.1