RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PPP2R3A (Homo sapiens)

Ensembl gene IDs: ENSG00000073711

Ensembl transcript IDs: ENST00000264977.8, ENST00000334546.6, ENST00000447251.2, ENST00000469270.1, ENST00000490467.5

Found 338 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCCAGCCAACACAGAGGCAACTTCAGTCACCTGTGTAGAGAACCGTaGTTGGTACTGTCGCCAAGAGATCCTTGGTACATTCAAGAGTGT +
Preference number: 1 (lower is better)
Translates to: ASQHRGNFSHLCREP*LVLSPRDPWYIQEC
Trigger: ACACTCTTGAATGTACCAAGGATCTCTTGGCGACAGTACCAAGCACGGTTCTCTACACAGGTGACTGAAGTTGCCTCTGTGTTGGCTGGC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264977.8
3UTR CCA 90 bp CACCTGTGTAGAGAACCGTGCTTGGTACTGTCGCCAAGAGATCCTTaGTACATTCAAGAGTGTAGAGTGCTGACTTTGGAAGGCGATGGT +
Preference number: 1 (lower is better)
Translates to: HLCREPCLVLSPRDP*YIQECRVLTLEGDG
Trigger: ACCATCGCCTTCCAAAGTCAGCACTCTACACTCTTGAATGTACCAAGGATCTCTTGGCGACAGTACCAAGCACGGTTCTCTACACAGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264977.8
3UTR CCA 90 bp GCCAACACAGAGGCAACTTCAGTCACCTGTGTAGAGAACCGTGCTTaGTACTGTCGCCAAGAGATCCTTGGTACATTCAAGAGTGTAGAG +
Preference number: 1 (lower is better)
Translates to: ANTEATSVTCVENRA*YCRQEILGTFKSVE
Trigger: CTCTACACTCTTGAATGTACCAAGGATCTCTTGGCGACAGTACCAAGCACGGTTCTCTACACAGGTGACTGAAGTTGCCTCTGTGTTGGC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264977.8
3UTR TCA 90 bp CCAGAGCTTGCCAGCAAAGTTGGAAGGCCCAGTGGTTACAATACCTaGGGATGTAAAGTGACTAGTAGTTTGGCAGGTAACTGTGAAATT +
Preference number: 1 (lower is better)
Translates to: PELASKVGRPSGYNT*GCKVTSSLAGNCEI
Trigger: AATTTCACAGTTACCTGCCAAACTACTAGTCACTTTACATCCTCAGGTATTGTAACCACTGGGCCTTCCAACTTTGCTGGCAAGCTCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264977.8
3UTR-3UTR CCA 90 bp GTGAAGGTTTCTTCTAGGCTCCATAGGAGCCCGGAGGGGACTCAGGGATGCCAGGTAGAGAACCGTGCTTaGTACTGTCGCCAAGAGATC +
Preference number: 2 (lower is better)
Translates to: VKVSSRLHRSPEGTQGCQVENRA*YCRQEI
Trigger: GATCTCTTGGCGACAGTACCAAGCACGGTTCTCTAC...CTGGCATCCCTGAGTCCCCTCCGGGCTCCTATGGAGCCTAGAAGAAACCTTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264977.8
3UTR CAA 90 bp AGCCAACACAGAGGCAACTTCAGTCACCTGTGTAGAGAACCGTGCTaGGTACTGTCGCCAAGAGATCCTTGGTACATTCAAGAGTGTAGA +
Preference number: 2 (lower is better)
Translates to: SQHRGNFSHLCREPC*VLSPRDPWYIQECR
Trigger: TCTACACTCTTGAATGTACCAAGGATCTCTTGGCGACAGTACCAAGCACGGTTCTCTACACAGGTGACTGAAGTTGCCTCTGTGTTGGCT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264977.8
3UTR CAA 90 bp CTTGAGATTTTATATAAGATCCACAGTCAGGGAGGTTACCAGAGCTaGCCAGCAAAGTTGGAAGGCCCAGTGGTTACAATACCTGAGGAT +
Preference number: 2 (lower is better)
Translates to: LEILYKIHSQGGYQS*PAKLEGPVVTIPED
Trigger: ATCCTCAGGTATTGTAACCACTGGGCCTTCCAACTTTGCTGGCAAGCTCTGGTAACCTCCCTGACTGTGGATCTTATATAAAATCTCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264977.8
3UTR-3UTR CCA 90 bp GCAGGATTCCTAGGATTGTTAACTCTCACTGTACTGTACCTTGTTTATAGCATAGATTTGGCTGGACTGTaGCCTGCTGAAAAATGTAGG +
Preference number: 2 (lower is better)
Translates to: AGFLGLLTLTVLYLVYSIDLAGL*PAEKCR
Trigger: CCTACATTTTTCAGCAGGCCACAGTCCAGCCAAATC...TATGCTATAAACAAGGTACAGTACAGTGAGAGTTAACAATCCTAGGAATCCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264977.8
3UTR CAA 90 bp GGCAAATTGGAGGAGCCTCCTAAGTTAAATGTGTATCCAGACCTATaGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTTGGAG +
Preference number: 2 (lower is better)
Translates to: GKLEEPPKLNVYPDL*LKNKVPSADDTHLE
Trigger: CTCCAAGTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAATAGGTCTGGATACACATTTAACTTAGGAGGCTCCTCCAATTTGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000490467.5
3UTR-3UTR TCA 90 bp GCAGGATTCCTAGGATTGTTAACTCTCACTGTACTGTACCTTGTTTATAGCATACATAAAAGAAGTCTCTaGGATGTTTTGGCAGTGCTT +
Preference number: 2 (lower is better)
Translates to: AGFLGLLTLTVLYLVYSIHKRSL*DVLAVL
Trigger: AAGCACTGCCAAAACATCTCAGAGACTTCTTTTATG...TATGCTATAAACAAGGTACAGTACAGTGAGAGTTAACAATCCTAGGAATCCTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264977.8
3UTR GCA 72 bp TCTAGGCTCCATAGGAGCCCGGAGGGGACTCAGGGATaGCAGCCAACACAGAGGCAACTTCAGTCACCTGTG +
Preference number: 3 (lower is better)
Translates to: SRLHRSPEGTQG*QPTQRQLQSPV
Trigger: CACAGGTGACTGAAGTTGCCTCTGTGTTGGCTGGCATCCCTGAGTCCCCTCCGGGCTCCTATGGAGCCTAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264977.8
3UTR-3UTR CAA 90 bp CCCAAGGTTCATTTCACTGCTTGGCCTTTATGCCAGCAAGGAGGGAACCTAGGTAGCTTGCCAGCAAAGTaGGAAGGCCCAGTGGTTACA +
Preference number: 3 (lower is better)
Translates to: PKVHFTAWPLCQQGGNLGSLPAK*EGPVVT
Trigger: TGTAACCACTGGGCCTTCCAACTTTGCTGGCAAGCT...ACCTAGGTTCCCTCCTTGCTGGCATAAAGGCCAAGCAGTGAAATGAACCTTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264977.8
3UTR TCA 72 bp AAGCCTGGTCATTGTATCGAGACAGATCGGCCTGGCTaGTGTAGAGGTCGTGATCAGTATCTAGTTCCCAGA +
Preference number: 3 (lower is better)
Translates to: KPGHCIETDRPG*CRGRDQYLVPR
Trigger: TCTGGGAACTAGATACTGATCACGACCTCTACATCAGCCAGGCCGATCTGTCTCGATACAATGACCAGGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447251.2
3UTR GCA 72 bp CACAGAGGCAACTTCAGTCACCTGTGTAGAGAACCGTaGTTGGTACTGTCGCCAAGAGATCCTTGGTACATT +
Preference number: 3 (lower is better)
Translates to: HRGNFSHLCREP*LVLSPRDPWYI
Trigger: AATGTACCAAGGATCTCTTGGCGACAGTACCAAGCACGGTTCTCTACACAGGTGACTGAAGTTGCCTCTGTG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264977.8
3UTR CCA 72 bp GAGGCAACTTCAGTCACCTGTGTAGAGAACCGTGCTTaGTACTGTCGCCAAGAGATCCTTGGTACATTCAAG +
Preference number: 3 (lower is better)
Translates to: EATSVTCVENRA*YCRQEILGTFK
Trigger: CTTGAATGTACCAAGGATCTCTTGGCGACAGTACCAAGCACGGTTCTCTACACAGGTGACTGAAGTTGCCTC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264977.8
3UTR TCA 72 bp CAAGAGATCCTTGGTACATTCAAGAGTGTAGAGTGCTaGCTTTGGAAGGCGATGGTACCACTTCTGAGGAGA +
Preference number: 3 (lower is better)
Translates to: QEILGTFKSVEC*LWKAMVPLLRR
Trigger: TCTCCTCAGAAGTGGTACCATCGCCTTCCAAAGTCAGCACTCTACACTCTTGAATGTACCAAGGATCTCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264977.8
3UTR TCA 72 bp GCCAGCAAAGTTGGAAGGCCCAGTGGTTACAATACCTaGGGATGTAAAGTGACTAGTAGTTTGGCAGGTAAC +
Preference number: 3 (lower is better)
Translates to: ASKVGRPSGYNT*GCKVTSSLAGN
Trigger: GTTACCTGCCAAACTACTAGTCACTTTACATCCTCAGGTATTGTAACCACTGGGCCTTCCAACTTTGCTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264977.8
3UTR CCA 72 bp AGAGAACCGTGCTTGGTACTGTCGCCAAGAGATCCTTaGTACATTCAAGAGTGTAGAGTGCTGACTTTGGAA +
Preference number: 3 (lower is better)
Translates to: REPCLVLSPRDP*YIQECRVLTLE
Trigger: TTCCAAAGTCAGCACTCTACACTCTTGAATGTACCAAGGATCTCTTGGCGACAGTACCAAGCACGGTTCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264977.8
3UTR TCA 72 bp AAGTTCCAGAATTTTCTGACTCAAGTTTTCTGCAAGTaGAGGTTTCTTCTAGGCTCCATAGGAGCCCGGAGG +
Preference number: 3 (lower is better)
Translates to: KFQNFLTQVFCK*RFLLGSIGARR
Trigger: CCTCCGGGCTCCTATGGAGCCTAGAAGAAACCTTCACTTGCAGAAAACTTGAGTCAGAAAATTCTGGAACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264977.8
3UTR-3UTR CAA 90 bp GCAGGATTCCTAGGATTGTTAACTCTCACTGTACTGTACCTTGTTTATAGCATATGTAGAGTGCTGACTTaGGAAGGCGATGGTACCACT +
Preference number: 3 (lower is better)
Translates to: AGFLGLLTLTVLYLVYSICRVLT*EGDGTT
Trigger: AGTGGTACCATCGCCTTCCAAAGTCAGCACTCTACA...TATGCTATAAACAAGGTACAGTACAGTGAGAGTTAACAATCCTAGGAATCCTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264977.8
3UTR TCA 72 bp GAAGGCCCAGTGGTTACAATACCTGAGGATGTAAAGTaGCTAGTAGTTTGGCAGGTAACTGTGAAATTACAT +
Preference number: 3 (lower is better)
Translates to: EGPVVTIPEDVK*LVVWQVTVKLH
Trigger: ATGTAATTTCACAGTTACCTGCCAAACTACTAGTCACTTTACATCCTCAGGTATTGTAACCACTGGGCCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264977.8
3UTR-3UTR CAA 90 bp TATTCTACCTTAATTCCTCAGAATTCACATTCCTTGCATTCAGCTCCAAGGAAGCAGATGGATATTAAGTaGCTTGGGGGTTTTACTTAC +
Preference number: 3 (lower is better)
Translates to: YSTLIPQNSHSLHSAPRKQMDIK*LGGFTY
Trigger: GTAAGTAAAACCCCCAAGCAACTTAATATCCATCTG...CTTCCTTGGAGCTGAATGCAAGGAATGTGAATTCTGAGGAATTAAGGTAGAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264977.8
3UTR-3UTR CAA 90 bp GCAGGATTCCTAGGATTGTTAACTCTCACTGTACTGTACCTTGTTTATAGCATATGGATATTAAGTTGCTaGGGGGTTTTACTTACATCA +
Preference number: 3 (lower is better)
Translates to: AGFLGLLTLTVLYLVYSIWILSC*GVLLTS
Trigger: TGATGTAAGTAAAACCCCCAAGCAACTTAATATCCA...TATGCTATAAACAAGGTACAGTACAGTGAGAGTTAACAATCCTAGGAATCCTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR TCA 90 bp GGTACCACTTCTGAGGAGAAGCTCCGTAAGAGGTTTGAGGCAAATTGGAGGAGCAAACCGGTCCCAGTCTaGGGGCTCAGGCCCATCGTT +
Preference number: 4 (lower is better)
Translates to: GTTSEEKLRKRFEANWRSKPVPV*GLRPIV
Trigger: AACGATGGGCCTGAGCCCTCAGACTGGGACCGGTTT...GCTCCTCCAATTTGCCTCAAACCTCTTACGGAGCTTCTCCTCAGAAGTGGTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264977.8
ENST00000334546.6
CDS-3UTR GCA 90 bp GGTACCACTTCTGAGGAGAAGCTCCGTAAGAGGTTTGAGGCAAATTGGAGGAGCTGTCTTCTCTCCCCCTaGAGCCCTGAACATGGGGGC +
Preference number: 4 (lower is better)
Translates to: GTTSEEKLRKRFEANWRSCLLSP*SPEHGG
Trigger: GCCCCCATGTTCAGGGCTGCAGGGGGAGAGAAGACA...GCTCCTCCAATTTGCCTCAAACCTCTTACGGAGCTTCTCCTCAGAAGTGGTACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000264977.8
ENST00000334546.6
CDS-3UTR TCA 90 bp CCCAAGGTTCATTTCACTGCTTGGCCTTTATGCCAGCAAGGAGGGAACCTAGGTCCCTGGGTATGCCTGTaGAGGCCTGTTGGGGATAGT +
Preference number: 4 (lower is better)
Translates to: PKVHFTAWPLCQQGGNLGPWVCL*RPVGDS
Trigger: ACTATCCCCAACAGGCCTTCACAGGCATACCCAGGG...ACCTAGGTTCCCTCCTTGCTGGCATAAAGGCCAAGCAGTGAAATGAACCTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR TCA 90 bp ACCACTTCTGAGGAGAAGCTCCGTAAGAGGTTTGAGGCAAATTGGAGGAGCCTCACAGATCGGCCTGGCTaGTGTAGAGGTCGTGATCAG +
Preference number: 4 (lower is better)
Translates to: TTSEEKLRKRFEANWRSLTDRPG*CRGRDQ
Trigger: CTGATCACGACCTCTACATCAGCCAGGCCGATCTGT...GAGGCTCCTCCAATTTGCCTCAAACCTCTTACGGAGCTTCTCCTCAGAAGTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264977.8
ENST00000334546.6
CDS-3UTR TCA 90 bp CTACTGAGAGCCCAGGCAGGCATCAGGTGTTCAATAAATATCAACACTGACTGTCTCCCCCTGCAGCCCTaGACATGGGGGCTTTCCAAT +
Preference number: 4 (lower is better)
Translates to: LLRAQAGIRCSININTDCLPLQP*TWGLSN
Trigger: ATTGGAAAGCCCCCATGTTCAGGGCTGCAGGGGGAG...ACAGTCAGTGTTGATATTTATTGAACACCTGATGCCTGCCTGGGCTCTCAGTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000447251.2
CDS-3UTR GCA 90 bp TTTCTTCTAGGCTCCATAGGAGCCCGGAGGGGACTCAGGGATGCCAGCCAACACGAGCAAAGTCTTCAATaGTTTCCAGGATTCGCAGTA +
Preference number: 4 (lower is better)
Translates to: FLLGSIGARRGLRDASQHEQSLQ*FPGFAV
Trigger: TACTGCGAATCCTGGAAAGCATTGAAGACTTTGCTC...GTGTTGGCTGGCATCCCTGAGTCCCCTCCGGGCTCCTATGGAGCCTAGAAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR GCA 90 bp CTGAGAGCCCAGGCAGGCATCAGGTGTTCAATAAATATCAACACTGACTGTGATTGTCTTCTCTCCCCCTaGAGCCCTGAACATGGGGGC +
Preference number: 4 (lower is better)
Translates to: LRAQAGIRCSININTDCDCLLSP*SPEHGG
Trigger: GCCCCCATGTTCAGGGCTGCAGGGGGAGAGAAGACA...ATCACAGTCAGTGTTGATATTTATTGAACACCTGATGCCTGCCTGGGCTCTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000447251.2
CDS-3UTR CCA 90 bp TTTCTTCTAGGCTCCATAGGAGCCCGGAGGGGACTCAGGGATGCCAGCCAACACACTGATAAATTGGCCTaGGAGGAAGTTGTCAAGGTT +
Preference number: 4 (lower is better)
Translates to: FLLGSIGARRGLRDASQHTDKLA*EEVVKV
Trigger: AACCTTGACAACTTCCTCCCAGGCCAATTTATCAGT...GTGTTGGCTGGCATCCCTGAGTCCCCTCCGGGCTCCTATGGAGCCTAGAAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR TCA 90 bp TTTCTTCTAGGCTCCATAGGAGCCCGGAGGGGACTCAGGGATGCCAGCCAACACACCTTTAATAACTCATaGCTAGGTCCATTCTCTGTC +
Preference number: 4 (lower is better)
Translates to: FLLGSIGARRGLRDASQHTFNNS*LGPFSV
Trigger: GACAGAGAATGGACCTAGTCATGAGTTATTAAAGGT...GTGTTGGCTGGCATCCCTGAGTCCCCTCCGGGCTCCTATGGAGCCTAGAAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR TCA 90 bp CTACTGAGAGCCCAGGCAGGCATCAGGTGTTCAATAAATATCAACACTGACTGTAGTGCTAGGGTCTACTaGGAGCCCAGGCAGGCATCA +
Preference number: 4 (lower is better)
Translates to: LLRAQAGIRCSININTDCSARVY*EPRQAS
Trigger: TGATGCCTGCCTGGGCTCTCAGTAGACCCTAGCACT...ACAGTCAGTGTTGATATTTATTGAACACCTGATGCCTGCCTGGGCTCTCAGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447251.2
CDS-3UTR GCA 90 bp GTGAAGGTTTCTTCTAGGCTCCATAGGAGCCCGGAGGGGACTCAGGGATGCCAGACAGCCACAGACCTTTaGAATTTTCCCCATTTCATA +
Preference number: 4 (lower is better)
Translates to: VKVSSRLHRSPEGTQGCQTATDL*NFPHFI
Trigger: TATGAAATGGGGAAAATTGCAAAGGTCTGTGGCTGT...CTGGCATCCCTGAGTCCCCTCCGGGCTCCTATGGAGCCTAGAAGAAACCTTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR TCA 90 bp CTACTGAGAGCCCAGGCAGGCATCAGGTGTTCAATAAATATCAACACTGACTGTACAGATCGGCCTGGCTaGTGTAGAGGTCGTGATCAG +
Preference number: 4 (lower is better)
Translates to: LLRAQAGIRCSININTDCTDRPG*CRGRDQ
Trigger: CTGATCACGACCTCTACATCAGCCAGGCCGATCTGT...ACAGTCAGTGTTGATATTTATTGAACACCTGATGCCTGCCTGGGCTCTCAGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447251.2
CDS-3UTR TCA 90 bp TTTCTTCTAGGCTCCATAGGAGCCCGGAGGGGACTCAGGGATGCCAGCCAACACCTATTCTTCATCCACTaGTTGAAGCTTTCCACATTT +
Preference number: 4 (lower is better)
Translates to: FLLGSIGARRGLRDASQHLFFIH*LKLSTF
Trigger: AAATGTGGAAAGCTTCAATCAGTGGATGAAGAATAG...GTGTTGGCTGGCATCCCTGAGTCCCCTCCGGGCTCCTATGGAGCCTAGAAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR GCA 90 bp ACCACTTCTGAGGAGAAGCTCCGTAAGAGGTTTGAGGCAAATTGGAGGAGCCTCCCTGTTCTAGAGAGCTaGAGTTGGGCTTTGCTAGAA +
Preference number: 4 (lower is better)
Translates to: TTSEEKLRKRFEANWRSLPVLES*SWALLE
Trigger: TTCTAGCAAAGCCCAACTGCAGCTCTCTAGAACAGG...GAGGCTCCTCCAATTTGCCTCAAACCTCTTACGGAGCTTCTCCTCAGAAGTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264977.8
ENST00000334546.6
CDS-3UTR GCA 90 bp CCCAAGGTTCATTTCACTGCTTGGCCTTTATGCCAGCAAGGAGGGAACCTAGGTTTGGGCAGATTCCTCTaGAACAAGCGTCTCATACTC +
Preference number: 4 (lower is better)
Translates to: PKVHFTAWPLCQQGGNLGLGRFL*NKRLIL
Trigger: GAGTATGAGACGCTTGTTGCAGAGGAATCTGCCCAA...ACCTAGGTTCCCTCCTTGCTGGCATAAAGGCCAAGCAGTGAAATGAACCTTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR GCA 90 bp CAAGAGTGTAGAGTGCTGACTTTGGAAGGCGATGGTACCACTTCTGAGGAGAAGGTTATAAACACAGCCTaGAGTGGGCCTGTTGCTCCT +
Preference number: 4 (lower is better)
Translates to: QECRVLTLEGDGTTSEEKVINTA*SGPVAP
Trigger: AGGAGCAACAGGCCCACTGCAGGCTGTGTTTATAAC...CTTCTCCTCAGAAGTGGTACCATCGCCTTCCAAAGTCAGCACTCTACACTCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334546.6
CDS-3UTR GCA 90 bp GGTACCACTTCTGAGGAGAAGCTCCGTAAGAGGTTTGAGGCAAATTGGAGGAGCGAAATTCAAGCATTGTaGTCTCCCAGCCTCCACAGA +
Preference number: 4 (lower is better)
Translates to: GTTSEEKLRKRFEANWRSEIQAL*SPSLHR
Trigger: TCTGTGGAGGCTGGGAGAGCACAATGCTTGAATTTC...GCTCCTCCAATTTGCCTCAAACCTCTTACGGAGCTTCTCCTCAGAAGTGGTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334546.6
CDS-3UTR CCA 90 bp CAAGAGTGTAGAGTGCTGACTTTGGAAGGCGATGGTACCACTTCTGAGGAGAAGGCGGGAGTGGAATTCTaGAGCATCTTTCAGGAACGT +
Preference number: 4 (lower is better)
Translates to: QECRVLTLEGDGTTSEEKAGVEF*SIFQER
Trigger: ACGTTCCTGAAAGATGCTCCAGAATTCCACTCCCGC...CTTCTCCTCAGAAGTGGTACCATCGCCTTCCAAAGTCAGCACTCTACACTCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264977.8
ENST00000334546.6
CDS-3UTR CCA 90 bp CCCAAGGTTCATTTCACTGCTTGGCCTTTATGCCAGCAAGGAGGGAACCTAGGTTTCTCAACATCCTTCTaGACCGCAAAGGGATCTCTC +
Preference number: 4 (lower is better)
Translates to: PKVHFTAWPLCQQGGNLGFSTSF*TAKGSL
Trigger: GAGAGATCCCTTTGCGGTCCAGAAGGATGTTGAGAA...ACCTAGGTTCCCTCCTTGCTGGCATAAAGGCCAAGCAGTGAAATGAACCTTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR CCA 90 bp CAAGAGTGTAGAGTGCTGACTTTGGAAGGCGATGGTACCACTTCTGAGGAGAAGAAAATGACAGGGAACTaGGAGCTTGTGACAGGCAGG +
Preference number: 4 (lower is better)
Translates to: QECRVLTLEGDGTTSEEKKMTGN*ELVTGR
Trigger: CCTGCCTGTCACAAGCTCCCAGTTCCCTGTCATTTT...CTTCTCCTCAGAAGTGGTACCATCGCCTTCCAAAGTCAGCACTCTACACTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR TCA 90 bp CAAGAGTGTAGAGTGCTGACTTTGGAAGGCGATGGTACCACTTCTGAGGAGAAGCCACATGGCAATGAATaGCTGTGCTGTCACAAATCC +
Preference number: 4 (lower is better)
Translates to: QECRVLTLEGDGTTSEEKPHGNE*LCCHKS
Trigger: GGATTTGTGACAGCACAGTCATTCATTGCCATGTGG...CTTCTCCTCAGAAGTGGTACCATCGCCTTCCAAAGTCAGCACTCTACACTCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264977.8
ENST00000334546.6
CDS-3UTR TCA 90 bp GGTACCACTTCTGAGGAGAAGCTCCGTAAGAGGTTTGAGGCAAATTGGAGGAGCTTCTCCACATGGCAATaGATGACTGTGCTGTCACAA +
Preference number: 4 (lower is better)
Translates to: GTTSEEKLRKRFEANWRSFSTWQ*MTVLSQ
Trigger: TTGTGACAGCACAGTCATTCATTGCCATGTGGAGAA...GCTCCTCCAATTTGCCTCAAACCTCTTACGGAGCTTCTCCTCAGAAGTGGTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264977.8
ENST00000334546.6
CDS-3UTR TCA 90 bp CTACTGAGAGCCCAGGCAGGCATCAGGTGTTCAATAAATATCAACACTGACTGTCATCTTTCAGGAACGTaGGACCAGGGTGGGTATCCA +
Preference number: 4 (lower is better)
Translates to: LLRAQAGIRCSININTDCHLSGT*DQGGYP
Trigger: TGGATACCCACCCTGGTCTCACGTTCCTGAAAGATG...ACAGTCAGTGTTGATATTTATTGAACACCTGATGCCTGCCTGGGCTCTCAGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447251.2
CDS-3UTR TCA 90 bp ACCACTTCTGAGGAGAAGCTCCGTAAGAGGTTTGAGGCAAATTGGAGGAGCCTCCCTGAGGATGTAAAGTaGCTAGTAGTTTGGCAGGTA +
Preference number: 4 (lower is better)
Translates to: TTSEEKLRKRFEANWRSLPEDVK*LVVWQV
Trigger: TACCTGCCAAACTACTAGTCACTTTACATCCTCAGG...GAGGCTCCTCCAATTTGCCTCAAACCTCTTACGGAGCTTCTCCTCAGAAGTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR GCA 90 bp CAAGAGTGTAGAGTGCTGACTTTGGAAGGCGATGGTACCACTTCTGAGGAGAAGCTCCATCCACATCCATaGAGCGGAACCAATACTCAA +
Preference number: 4 (lower is better)
Translates to: QECRVLTLEGDGTTSEEKLHPHP*SGTNTQ
Trigger: TTGAGTATTGGTTCCGCTGCATGGATGTGGATGGAG...CTTCTCCTCAGAAGTGGTACCATCGCCTTCCAAAGTCAGCACTCTACACTCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264977.8
ENST00000334546.6
CDS-3UTR CCA 90 bp CAAGAGTGTAGAGTGCTGACTTTGGAAGGCGATGGTACCACTTCTGAGGAGAAGCTAGAGAGCTGCAGTTaGGCTTTGCTAGAAGACAGA +
Preference number: 4 (lower is better)
Translates to: QECRVLTLEGDGTTSEEKLESCS*ALLEDR
Trigger: TCTGTCTTCTAGCAAAGCCCAACTGCAGCTCTCTAG...CTTCTCCTCAGAAGTGGTACCATCGCCTTCCAAAGTCAGCACTCTACACTCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264977.8
ENST00000334546.6
CDS-3UTR CCA 90 bp CAAGAGTGTAGAGTGCTGACTTTGGAAGGCGATGGTACCACTTCTGAGGAGAAGTTCTCAACATCCTTCTaGACCGCAAAGGGATCTCTC +
Preference number: 4 (lower is better)
Translates to: QECRVLTLEGDGTTSEEKFSTSF*TAKGSL
Trigger: GAGAGATCCCTTTGCGGTCCAGAAGGATGTTGAGAA...CTTCTCCTCAGAAGTGGTACCATCGCCTTCCAAAGTCAGCACTCTACACTCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264977.8
ENST00000334546.6
CDS-3UTR CCA 90 bp TACATTCAAGAGTGTAGAGTGCTGACTTTGGAAGGCGATGGTACCACTTCTGAGCTATGTTGCCCAGGCTaGTCTTTACTCCTGGGCTCA +
Preference number: 4 (lower is better)
Translates to: YIQECRVLTLEGDGTTSELCCPG*SLLLGS
Trigger: TGAGCCCAGGAGTAAAGACCAGCCTGGGCAACATAG...CTCAGAAGTGGTACCATCGCCTTCCAAAGTCAGCACTCTACACTCTTGAATGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264977.8
3UTR CAA 72 bp AGAGGCAACTTCAGTCACCTGTGTAGAGAACCGTGCTaGGTACTGTCGCCAAGAGATCCTTGGTACATTCAA +
Preference number: 4 (lower is better)
Translates to: RGNFSHLCREPC*VLSPRDPWYIQ
Trigger: TTGAATGTACCAAGGATCTCTTGGCGACAGTACCAAGCACGGTTCTCTACACAGGTGACTGAAGTTGCCTCT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR TCA 90 bp ACCACTTCTGAGGAGAAGCTCCGTAAGAGGTTTGAGGCAAATTGGAGGAGCCTCTCATTTTTCTGTGAATaGCAGAGAAACCTCGTTGCC +
Preference number: 4 (lower is better)
Translates to: TTSEEKLRKRFEANWRSLSFFCE*QRNLVA
Trigger: GGCAACGAGGTTTCTCTGTCATTCACAGAAAAATGA...GAGGCTCCTCCAATTTGCCTCAAACCTCTTACGGAGCTTCTCCTCAGAAGTGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR TCA 90 bp TGGTACATTCAAGAGTGTAGAGTGCTGACTTTGGAAGGCGATGGTACCACTTCTAGTCAATTCCATGTGTaGAGGTGTGGCAGGTTCCAG +
Preference number: 4 (lower is better)
Translates to: WYIQECRVLTLEGDGTTSSQFHV*RCGRFQ
Trigger: CTGGAACCTGCCACACCTTCACACATGGAATTGACT...AGAAGTGGTACCATCGCCTTCCAAAGTCAGCACTCTACACTCTTGAATGTACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR TCA 90 bp TGGTACATTCAAGAGTGTAGAGTGCTGACTTTGGAAGGCGATGGTACCACTTCTTCCAGAGTCAGAAGCTaGGAGCTGGACAACATCTTC +
Preference number: 4 (lower is better)
Translates to: WYIQECRVLTLEGDGTTSSRVRS*ELDNIF
Trigger: GAAGATGTTGTCCAGCTCTCAGCTTCTGACTCTGGA...AGAAGTGGTACCATCGCCTTCCAAAGTCAGCACTCTACACTCTTGAATGTACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR TCA 90 bp TTATTACTAGGGCTAAGTCAATTCTGGAGGCCCTTACTACTTTTTCAAGTTCCACTCCCCCTGCAGCCCTaGACATGGGGGCTTTCCAAT +
Preference number: 4 (lower is better)
Translates to: LLLGLSQFWRPLLLFQVPLPLQP*TWGLSN
Trigger: ATTGGAAAGCCCCCATGTTCAGGGCTGCAGGGGGAG...TGGAACTTGAAAAAGTAGTAAGGGCCTCCAGAATTGACTTAGCCCTAGTAATAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR TCA 90 bp ATCCAGACCTATTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTTGGCTCCCCCTGCAGCCCTaGACATGGGGGCTTTCCAAT +
Preference number: 4 (lower is better)
Translates to: IQTYCLKTKFLVQMIHTWLPLQP*TWGLSN
Trigger: ATTGGAAAGCCCCCATGTTCAGGGCTGCAGGGGGAG...CCAAGTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAATAGGTCTGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000490467.5
CDS-3UTR TCA 90 bp GGTCTACTGAGAGCCCAGGCAGGCATCAGGTGTTCAATAAATATCAACACTGACCCTGAAGTAGAGGGATaGAATCCTCCTGTTCTAGAG +
Preference number: 4 (lower is better)
Translates to: GLLRAQAGIRCSININTDPEVEG*NPPVLE
Trigger: CTCTAGAACAGGAGGATTTCATCCCTCTACTTCAGG...GTCAGTGTTGATATTTATTGAACACCTGATGCCTGCCTGGGCTCTCAGTAGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447251.2
CDS-3UTR TCA 90 bp CAAGAGTGTAGAGTGCTGACTTTGGAAGGCGATGGTACCACTTCTGAGGAGAAGCCGCTTCTTAAACCGTaGAGGGAGAACAAAATCACA +
Preference number: 4 (lower is better)
Translates to: QECRVLTLEGDGTTSEEKPLLKP*RENKIT
Trigger: TGTGATTTTGTTCTCCCTTCACGGTTTAAGAAGCGG...CTTCTCCTCAGAAGTGGTACCATCGCCTTCCAAAGTCAGCACTCTACACTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334546.6
CDS-3UTR GCA 90 bp GGTACCACTTCTGAGGAGAAGCTCCGTAAGAGGTTTGAGGCAAATTGGAGGAGCAGATGTGAGCCATTCTaGACCTCTTCAGATCTCTTA +
Preference number: 4 (lower is better)
Translates to: GTTSEEKLRKRFEANWRSRCEPF*TSSDLL
Trigger: TAAGAGATCTGAAGAGGTGCAGAATGGCTCACATCT...GCTCCTCCAATTTGCCTCAAACCTCTTACGGAGCTTCTCCTCAGAAGTGGTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264977.8
ENST00000334546.6
CDS-3UTR GCA 90 bp TACATTCAAGAGTGTAGAGTGCTGACTTTGGAAGGCGATGGTACCACTTCTGAGACTGCTTGGCCTTTATaGCAGCAAGGAGGGAACCTA +
Preference number: 4 (lower is better)
Translates to: YIQECRVLTLEGDGTTSETAWPL*QQGGNL
Trigger: TAGGTTCCCTCCTTGCTGGCATAAAGGCCAAGCAGT...CTCAGAAGTGGTACCATCGCCTTCCAAAGTCAGCACTCTACACTCTTGAATGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR CCA 90 bp TACATTCAAGAGTGTAGAGTGCTGACTTTGGAAGGCGATGGTACCACTTCTGAGTTCAGTGCCAAACACTaGGGAGAAGGGAGTCAGTTG +
Preference number: 4 (lower is better)
Translates to: YIQECRVLTLEGDGTTSEFSAKH*GEGSQL
Trigger: CAACTGACTCCCTTCTCCCCAGTGTTTGGCACTGAA...CTCAGAAGTGGTACCATCGCCTTCCAAAGTCAGCACTCTACACTCTTGAATGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR CCA 90 bp CTGAGAGCCCAGGCAGGCATCAGGTGTTCAATAAATATCAACACTGACTGTGATGCGGGAGTGGAATTCTaGAGCATCTTTCAGGAACGT +
Preference number: 4 (lower is better)
Translates to: LRAQAGIRCSININTDCDAGVEF*SIFQER
Trigger: ACGTTCCTGAAAGATGCTCCAGAATTCCACTCCCGC...ATCACAGTCAGTGTTGATATTTATTGAACACCTGATGCCTGCCTGGGCTCTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447251.2
CDS-3UTR CCA 90 bp TGGTACATTCAAGAGTGTAGAGTGCTGACTTTGGAAGGCGATGGTACCACTTCTAGGGCTCAATTCCCATaGCTTCCATCCGTTCACACT +
Preference number: 4 (lower is better)
Translates to: WYIQECRVLTLEGDGTTSRAQFP*LPSVHT
Trigger: AGTGTGAACGGATGGAAGCCATGGGAATTGAGCCCT...AGAAGTGGTACCATCGCCTTCCAAAGTCAGCACTCTACACTCTTGAATGTACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264977.8
ENST00000334546.6
CDS-3UTR TCA 90 bp CCCAAGGTTCATTTCACTGCTTGGCCTTTATGCCAGCAAGGAGGGAACCTAGGTGTTTATTTTGAATCTTaGTCACCTCTGGAGTCTGCT +
Preference number: 4 (lower is better)
Translates to: PKVHFTAWPLCQQGGNLGVYFES*SPLESA
Trigger: AGCAGACTCCAGAGGTGATCAAGATTCAAAATAAAC...ACCTAGGTTCCCTCCTTGCTGGCATAAAGGCCAAGCAGTGAAATGAACCTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR TCA 90 bp ACCACTTCTGAGGAGAAGCTCCGTAAGAGGTTTGAGGCAAATTGGAGGAGCCTCCTTAGAGTTTGTTCATaGTTACTACAGGTATCTGGG +
Preference number: 4 (lower is better)
Translates to: TTSEEKLRKRFEANWRSLLRVCS*LLQVSG
Trigger: CCCAGATACCTGTAGTAATCATGAACAAACTCTAAG...GAGGCTCCTCCAATTTGCCTCAAACCTCTTACGGAGCTTCTCCTCAGAAGTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264977.8
ENST00000334546.6
CDS-3UTR TCA 90 bp CTACTGAGAGCCCAGGCAGGCATCAGGTGTTCAATAAATATCAACACTGACTGTCCACATGGCAATGAATaGCTGTGCTGTCACAAATCC +
Preference number: 4 (lower is better)
Translates to: LLRAQAGIRCSININTDCPHGNE*LCCHKS
Trigger: GGATTTGTGACAGCACAGTCATTCATTGCCATGTGG...ACAGTCAGTGTTGATATTTATTGAACACCTGATGCCTGCCTGGGCTCTCAGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447251.2
CDS-3UTR TCA 90 bp TGTATCCAGACCTATTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTAAACCGGTCCCAGTCTaGGGGCTCAGGCCCATCGTT +
Preference number: 4 (lower is better)
Translates to: CIQTYCLKTKFLVQMIHTKPVPV*GLRPIV
Trigger: AACGATGGGCCTGAGCCCTCAGACTGGGACCGGTTT...AGTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAATAGGTCTGGATACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000490467.5
CDS-3UTR TCA 90 bp CCCAAGGTTCATTTCACTGCTTGGCCTTTATGCCAGCAAGGAGGGAACCTAGGTAGTGGTTACAATACCTaGGGATGTAAAGTGACTAGT +
Preference number: 4 (lower is better)
Translates to: PKVHFTAWPLCQQGGNLGSGYNT*GCKVTS
Trigger: ACTAGTCACTTTACATCCTCAGGTATTGTAACCACT...ACCTAGGTTCCCTCCTTGCTGGCATAAAGGCCAAGCAGTGAAATGAACCTTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR TCA 90 bp TGGTACATTCAAGAGTGTAGAGTGCTGACTTTGGAAGGCGATGGTACCACTTCTAATCTATGCTTGTCCTaGCATGCAGCTGGTTCCCAA +
Preference number: 4 (lower is better)
Translates to: WYIQECRVLTLEGDGTTSNLCLS*HAAGSQ
Trigger: TTGGGAACCAGCTGCATGTCAGGACAAGCATAGATT...AGAAGTGGTACCATCGCCTTCCAAAGTCAGCACTCTACACTCTTGAATGTACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334546.6
CDS-3UTR GCA 90 bp TATCCAGACCTATTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTTGTGTCTTCTCTCCCCCTaGAGCCCTGAACATGGGGGC +
Preference number: 4 (lower is better)
Translates to: YPDLLLKNKVPSADDTHLCLLSP*SPEHGG
Trigger: GCCCCCATGTTCAGGGCTGCAGGGGGAGAGAAGACA...CAAGTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAATAGGTCTGGATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000490467.5
CDS-3UTR GCA 90 bp CTACTGAGAGCCCAGGCAGGCATCAGGTGTTCAATAAATATCAACACTGACTGTCCTGTTCTAGAGAGCTaGAGTTGGGCTTTGCTAGAA +
Preference number: 4 (lower is better)
Translates to: LLRAQAGIRCSININTDCPVLES*SWALLE
Trigger: TTCTAGCAAAGCCCAACTGCAGCTCTCTAGAACAGG...ACAGTCAGTGTTGATATTTATTGAACACCTGATGCCTGCCTGGGCTCTCAGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447251.2
CDS-3UTR GCA 90 bp TGGTACATTCAAGAGTGTAGAGTGCTGACTTTGGAAGGCGATGGTACCACTTCTTTGGGCAGATTCCTCTaGAACAAGCGTCTCATACTC +
Preference number: 4 (lower is better)
Translates to: WYIQECRVLTLEGDGTTSLGRFL*NKRLIL
Trigger: GAGTATGAGACGCTTGTTGCAGAGGAATCTGCCCAA...AGAAGTGGTACCATCGCCTTCCAAAGTCAGCACTCTACACTCTTGAATGTACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264977.8
ENST00000334546.6
CDS-3UTR CCA 90 bp GTGTATCCAGACCTATTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACGACTACTTGGAGAGGTaGCTGGAGGTGGGAGTGGTG +
Preference number: 4 (lower is better)
Translates to: VYPDLLLKNKVPSADDTHDYLER*LEVGVV
Trigger: CACCACTCCCACCTCCAGCCACCTCTCCAAGTAGTC...GTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAATAGGTCTGGATACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000490467.5
CDS-3UTR CCA 90 bp CTACTGAGAGCCCAGGCAGGCATCAGGTGTTCAATAAATATCAACACTGACTGTCTAGAGAGCTGCAGTTaGGCTTTGCTAGAAGACAGA +
Preference number: 4 (lower is better)
Translates to: LLRAQAGIRCSININTDCLESCS*ALLEDR
Trigger: TCTGTCTTCTAGCAAAGCCCAACTGCAGCTCTCTAG...ACAGTCAGTGTTGATATTTATTGAACACCTGATGCCTGCCTGGGCTCTCAGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447251.2
CDS-3UTR CCA 90 bp GGTACCACTTCTGAGGAGAAGCTCCGTAAGAGGTTTGAGGCAAATTGGAGGAGCACTAGGTCAAGCATCTaGCACAGTAAATCATGGAAT +
Preference number: 4 (lower is better)
Translates to: GTTSEEKLRKRFEANWRSTRSSI*HSKSWN
Trigger: ATTCCATGATTTACTGTGCCAGATGCTTGACCTAGT...GCTCCTCCAATTTGCCTCAAACCTCTTACGGAGCTTCTCCTCAGAAGTGGTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264977.8
ENST00000334546.6
CDS-3UTR TCA 90 bp CAAGAGTGTAGAGTGCTGACTTTGGAAGGCGATGGTACCACTTCTGAGGAGAAGGGTCTCCATCTTCTGTaGAAAAGATTCCAAATCCAT +
Preference number: 4 (lower is better)
Translates to: QECRVLTLEGDGTTSEEKGLHLL*KRFQIH
Trigger: ATGGATTTGGAATCTTTTTCACAGAAGATGGAGACC...CTTCTCCTCAGAAGTGGTACCATCGCCTTCCAAAGTCAGCACTCTACACTCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR TCA 90 bp TACATTCAAGAGTGTAGAGTGCTGACTTTGGAAGGCGATGGTACCACTTCTGAGACCTCTGGAGTCTGCTaGATCAAAACTGCTGAAGTA +
Preference number: 4 (lower is better)
Translates to: YIQECRVLTLEGDGTTSETSGVC*IKTAEV
Trigger: TACTTCAGCAGTTTTGATTCAGCAGACTCCAGAGGT...CTCAGAAGTGGTACCATCGCCTTCCAAAGTCAGCACTCTACACTCTTGAATGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR TCA 90 bp CTATTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTTGGAGAAATCACTCCCCCTGCAGCCCTaGACATGGGGGCTTTCCAAT +
Preference number: 4 (lower is better)
Translates to: LLLKNKVPSADDTHLEKSLPLQP*TWGLSN
Trigger: ATTGGAAAGCCCCCATGTTCAGGGCTGCAGGGGGAG...TGATTTCTCCAAGTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAATAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000490467.5
CDS-3UTR TCA 90 bp CTACTGAGAGCCCAGGCAGGCATCAGGTGTTCAATAAATATCAACACTGACTGTTTCTCCACATGGCAATaGATGACTGTGCTGTCACAA +
Preference number: 4 (lower is better)
Translates to: LLRAQAGIRCSININTDCFSTWQ*MTVLSQ
Trigger: TTGTGACAGCACAGTCATTCATTGCCATGTGGAGAA...ACAGTCAGTGTTGATATTTATTGAACACCTGATGCCTGCCTGGGCTCTCAGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447251.2
CDS-3UTR TCA 90 bp GCAGGATTCCTAGGATTGTTAACTCTCACTGTACTGTACCTTGTTTATAGCATAGGAACTGGGAGCTTGTaGCAGGCAGGATTCCTAGGA +
Preference number: 4 (lower is better)
Translates to: AGFLGLLTLTVLYLVYSIGTGSL*QAGFLG
Trigger: TCCTAGGAATCCTGCCTGTCACAAGCTCCCAGTTCC...TATGCTATAAACAAGGTACAGTACAGTGAGAGTTAACAATCCTAGGAATCCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR GCA 90 bp CTATTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTTGGAGAAATCATGTCTTCTCTCCCCCTaGAGCCCTGAACATGGGGGC +
Preference number: 4 (lower is better)
Translates to: LLLKNKVPSADDTHLEKSCLLSP*SPEHGG
Trigger: GCCCCCATGTTCAGGGCTGCAGGGGGAGAGAAGACA...TGATTTCTCCAAGTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAATAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000490467.5
CDS-3UTR GCA 90 bp TTGGAGGAGCCTCCTAAGTTAAATGTGTATCCAGACCTATTGCTTAAAAACAAAGAGGGGACTCAGGGATaGCAGCCAACACAGAGGCAA +
Preference number: 4 (lower is better)
Translates to: LEEPPKLNVYPDLLLKNKEGTQG*QPTQRQ
Trigger: TTGCCTCTGTGTTGGCTGGCATCCCTGAGTCCCCTC...TTTGTTTTTAAGCAATAGGTCTGGATACACATTTAACTTAGGAGGCTCCTCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR CCA 90 bp CCCAAGGTTCATTTCACTGCTTGGCCTTTATGCCAGCAAGGAGGGAACCTAGGTAGTTTTGAAGAAACATaGAAGTCAGGTTCGTATCCA +
Preference number: 4 (lower is better)
Translates to: PKVHFTAWPLCQQGGNLGSFEET*KSGSYP
Trigger: TGGATACGAACCTGACTTCCATGTTTCTTCAAAACT...ACCTAGGTTCCCTCCTTGCTGGCATAAAGGCCAAGCAGTGAAATGAACCTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR CCA 90 bp TTGGAGGAGCCTCCTAAGTTAAATGTGTATCCAGACCTATTGCTTAAAAACAAAGACTACTTGGAGAGGTaGCTGGAGGTGGGAGTGGTG +
Preference number: 4 (lower is better)
Translates to: LEEPPKLNVYPDLLLKNKDYLER*LEVGVV
Trigger: CACCACTCCCACCTCCAGCCACCTCTCCAAGTAGTC...TTTGTTTTTAAGCAATAGGTCTGGATACACATTTAACTTAGGAGGCTCCTCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000490467.5
CDS-3UTR CCA 90 bp AAATTGGAGGAGCCTCCTAAGTTAAATGTGTATCCAGACCTATTGCTTAAAAACGACTACTTGGAGAGGTaGCTGGAGGTGGGAGTGGTG +
Preference number: 4 (lower is better)
Translates to: KLEEPPKLNVYPDLLLKNDYLER*LEVGVV
Trigger: CACCACTCCCACCTCCAGCCACCTCTCCAAGTAGTC...GTTTTTAAGCAATAGGTCTGGATACACATTTAACTTAGGAGGCTCCTCCAATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000490467.5
CDS-3UTR TCA 90 bp GTGTATCCAGACCTATTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACCATCTTTCAGGAACGTaGGACCAGGGTGGGTATCCA +
Preference number: 4 (lower is better)
Translates to: VYPDLLLKNKVPSADDTHHLSGT*DQGGYP
Trigger: TGGATACCCACCCTGGTCTCACGTTCCTGAAAGATG...GTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAATAGGTCTGGATACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000490467.5
CDS-3UTR TCA 90 bp GGTCTACTGAGAGCCCAGGCAGGCATCAGGTGTTCAATAAATATCAACACTGACCACTCCAAGATCTGTTaGCTGTGTAGAATATTCTCT +
Preference number: 4 (lower is better)
Translates to: GLLRAQAGIRCSININTDHSKIC*LCRIFS
Trigger: AGAGAATATTCTACACAGTCAACAGATCTTGGAGTG...GTCAGTGTTGATATTTATTGAACACCTGATGCCTGCCTGGGCTCTCAGTAGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447251.2
CDS-3UTR TCA 90 bp TATCCAGACCTATTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTTGACAGATCGGCCTGGCTaGTGTAGAGGTCGTGATCAG +
Preference number: 4 (lower is better)
Translates to: YPDLLLKNKVPSADDTHLTDRPG*CRGRDQ
Trigger: CTGATCACGACCTCTACATCAGCCAGGCCGATCTGT...CAAGTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAATAGGTCTGGATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000490467.5
CDS-3UTR CCA 90 bp GCAGGATTCCTAGGATTGTTAACTCTCACTGTACTGTACCTTGTTTATAGCATAGGCTGGAGGTGGGAGTaGTGTTCCAGGTTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: AGFLGLLTLTVLYLVYSIGWRWE*CSRFLF
Trigger: GAAAAGAAACCTGGAACACCACTCCCACCTCCAGCC...TATGCTATAAACAAGGTACAGTACAGTGAGAGTTAACAATCCTAGGAATCCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR TCA 90 bp CTGAGAGCCCAGGCAGGCATCAGGTGTTCAATAAATATCAACACTGACTGTGATCTTAGAGTTTGTTCATaGTTACTACAGGTATCTGGG +
Preference number: 4 (lower is better)
Translates to: LRAQAGIRCSININTDCDLRVCS*LLQVSG
Trigger: CCCAGATACCTGTAGTAATCATGAACAAACTCTAAG...ATCACAGTCAGTGTTGATATTTATTGAACACCTGATGCCTGCCTGGGCTCTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447251.2
CDS-3UTR TCA 90 bp CCAGACCTATTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTTGGAGCCACATGGCAATGAATaGCTGTGCTGTCACAAATCC +
Preference number: 4 (lower is better)
Translates to: PDLLLKNKVPSADDTHLEPHGNE*LCCHKS
Trigger: GGATTTGTGACAGCACAGTCATTCATTGCCATGTGG...CTCCAAGTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAATAGGTCTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000490467.5
CDS-3UTR TCA 90 bp AAATTGGAGGAGCCTCCTAAGTTAAATGTGTATCCAGACCTATTGCTTAAAAACCATCTTTCAGGAACGTaGGACCAGGGTGGGTATCCA +
Preference number: 4 (lower is better)
Translates to: KLEEPPKLNVYPDLLLKNHLSGT*DQGGYP
Trigger: TGGATACCCACCCTGGTCTCACGTTCCTGAAAGATG...GTTTTTAAGCAATAGGTCTGGATACACATTTAACTTAGGAGGCTCCTCCAATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000490467.5
CDS-3UTR TCA 90 bp CTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTTGGAGAAATCAAAGTCTACAGATCGGCCTGGCTaGTGTAGAGGTCGTGATCAG +
Preference number: 4 (lower is better)
Translates to: LKNKVPSADDTHLEKSKSTDRPG*CRGRDQ
Trigger: CTGATCACGACCTCTACATCAGCCAGGCCGATCTGT...AGACTTTGATTTCTCCAAGTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000490467.5
CDS-3UTR GCA 90 bp GTGTATCCAGACCTATTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACGGTCTATCACCACGCTaGTGTAGTGGTTCACAGTAC +
Preference number: 4 (lower is better)
Translates to: VYPDLLLKNKVPSADDTHGLSPR*CSGSQY
Trigger: GTACTGTGAACCACTACAGCAGCGTGGTGATAGACC...GTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAATAGGTCTGGATACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR GCA 90 bp TACATTCAAGAGTGTAGAGTGCTGACTTTGGAAGGCGATGGTACCACTTCTGAGTCCCTCTGCTTGATTTaGATTCAACTAGTTCTTGAG +
Preference number: 4 (lower is better)
Translates to: YIQECRVLTLEGDGTTSESLCLI*IQLVLE
Trigger: CTCAAGAACTAGTTGAATGCAAATCAAGCAGAGGGA...CTCAGAAGTGGTACCATCGCCTTCCAAAGTCAGCACTCTACACTCTTGAATGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR GCA 90 bp CTGAGAGCCCAGGCAGGCATCAGGTGTTCAATAAATATCAACACTGACTGTGATACAGCCACAGACCTTTaGAATTTTCCCCATTTCATA +
Preference number: 4 (lower is better)
Translates to: LRAQAGIRCSININTDCDTATDL*NFPHFI
Trigger: TATGAAATGGGGAAAATTGCAAAGGTCTGTGGCTGT...ATCACAGTCAGTGTTGATATTTATTGAACACCTGATGCCTGCCTGGGCTCTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447251.2
CDS-3UTR GCA 90 bp TTATTACTAGGGCTAAGTCAATTCTGGAGGCCCTTACTACTTTTTCAAGTTCCACTGTGTAGAGAACCGTaGTTGGTACTGTCGCCAAGA +
Preference number: 4 (lower is better)
Translates to: LLLGLSQFWRPLLLFQVPLCREP*LVLSPR
Trigger: TCTTGGCGACAGTACCAAGCACGGTTCTCTACACAG...TGGAACTTGAAAAAGTAGTAAGGGCCTCCAGAATTGACTTAGCCCTAGTAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR CCA 90 bp AAATTGGAGGAGCCTCCTAAGTTAAATGTGTATCCAGACCTATTGCTTAAAAACGGCTGGAGGTGGGAGTaGTGTTCCAGGTTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: KLEEPPKLNVYPDLLLKNGWRWE*CSRFLF
Trigger: GAAAAGAAACCTGGAACACCACTCCCACCTCCAGCC...GTTTTTAAGCAATAGGTCTGGATACACATTTAACTTAGGAGGCTCCTCCAATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000490467.5
CDS-3UTR CCA 90 bp TGGTACATTCAAGAGTGTAGAGTGCTGACTTTGGAAGGCGATGGTACCACTTCTAGGAAAGTAGAACCGTaGAATGTTTATGGACAATGG +
Preference number: 4 (lower is better)
Translates to: WYIQECRVLTLEGDGTTSRKVEP*NVYGQW
Trigger: CCATTGTCCATAAACATTCCACGGTTCTACTTTCCT...AGAAGTGGTACCATCGCCTTCCAAAGTCAGCACTCTACACTCTTGAATGTACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264977.8
ENST00000334546.6
CDS-3UTR CCA 90 bp TATTCTACCTTAATTCCTCAGAATTCACATTCCTTGCATTCAGCTCCAAGGAAGAGGGCTCAATTCCCATaGCTTCCATCCGTTCACACT +
Preference number: 4 (lower is better)
Translates to: YSTLIPQNSHSLHSAPRKRAQFP*LPSVHT
Trigger: AGTGTGAACGGATGGAAGCCATGGGAATTGAGCCCT...CTTCCTTGGAGCTGAATGCAAGGAATGTGAATTCTGAGGAATTAAGGTAGAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR CCA 90 bp ATCCAGACCTATTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTTGGAGGGCTCAATTCCCATaGCTTCCATCCGTTCACACT +
Preference number: 4 (lower is better)
Translates to: IQTYCLKTKFLVQMIHTWRAQFP*LPSVHT
Trigger: AGTGTGAACGGATGGAAGCCATGGGAATTGAGCCCT...CCAAGTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAATAGGTCTGGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000490467.5
CDS-3UTR CCA 90 bp CCAGACCTATTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTTGGAGTTCTCAACATCCTTCTaGACCGCAAAGGGATCTCTC +
Preference number: 4 (lower is better)
Translates to: PDLLLKNKVPSADDTHLEFSTSF*TAKGSL
Trigger: GAGAGATCCCTTTGCGGTCCAGAAGGATGTTGAGAA...CTCCAAGTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAATAGGTCTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000490467.5
CDS-3UTR CCA 90 bp CAGACCTATTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTTGGAGAGTAGAGAACCGTGCTTaGTACTGTCGCCAAGAGATC +
Preference number: 4 (lower is better)
Translates to: QTYCLKTKFLVQMIHTWRVENRA*YCRQEI
Trigger: GATCTCTTGGCGACAGTACCAAGCACGGTTCTCTAC...TCTCCAAGTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAATAGGTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR TCA 90 bp TATTCTACCTTAATTCCTCAGAATTCACATTCCTTGCATTCAGCTCCAAGGAAGTCTGCATCTTTGAACTaGGACACAGGGATGTGCAAG +
Preference number: 4 (lower is better)
Translates to: YSTLIPQNSHSLHSAPRKSASLN*DTGMCK
Trigger: CTTGCACATCCCTGTGTCTCAGTTCAAAGATGCAGA...CTTCCTTGGAGCTGAATGCAAGGAATGTGAATTCTGAGGAATTAAGGTAGAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR TCA 90 bp TACATTCAAGAGTGTAGAGTGCTGACTTTGGAAGGCGATGGTACCACTTCTGAGCATTCAACTAGTTCTTaGGCAAAGTCTTCAATGCTT +
Preference number: 4 (lower is better)
Translates to: YIQECRVLTLEGDGTTSEHSTSS*AKSSML
Trigger: AAGCATTGAAGACTTTGCTCAAGAACTAGTTGAATG...CTCAGAAGTGGTACCATCGCCTTCCAAAGTCAGCACTCTACACTCTTGAATGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR TCA 90 bp CTACTGAGAGCCCAGGCAGGCATCAGGTGTTCAATAAATATCAACACTGACTGTTTAGAGGCATCATCATaGTGGTTATTCAGCAACTTT +
Preference number: 4 (lower is better)
Translates to: LLRAQAGIRCSININTDCLEASS*WLFSNF
Trigger: AAAGTTGCTGAATAACCATCATGATGATGCCTCTAA...ACAGTCAGTGTTGATATTTATTGAACACCTGATGCCTGCCTGGGCTCTCAGTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447251.2
CDS-3UTR TCA 90 bp ATCCAGACCTATTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTTGGCCTGAAGTAGAGGGATaGAATCCTCCTGTTCTAGAG +
Preference number: 4 (lower is better)
Translates to: IQTYCLKTKFLVQMIHTWPEVEG*NPPVLE
Trigger: CTCTAGAACAGGAGGATTTCATCCCTCTACTTCAGG...CCAAGTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAATAGGTCTGGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000490467.5
CDS-3UTR TCA 90 bp TTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTTGGAGAAATCAAAGCATCTTTCAGGAACGTaGGACCAGGGTGGGTATCCA +
Preference number: 4 (lower is better)
Translates to: LLKNKVPSADDTHLEKSKHLSGT*DQGGYP
Trigger: TGGATACCCACCCTGGTCTCACGTTCCTGAAAGATG...CTTTGATTTCTCCAAGTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000490467.5
CDS-3UTR TCA 90 bp TACATTCAAGAGTGTAGAGTGCTGACTTTGGAAGGCGATGGTACCACTTCTGAGTATCTCCCAAAGAAATaGAATTCAAGCATTGTGCTC +
Preference number: 4 (lower is better)
Translates to: YIQECRVLTLEGDGTTSEYLPKK*NSSIVL
Trigger: GAGCACAATGCTTGAATTTCATTTCTTTGGGAGATA...CTCAGAAGTGGTACCATCGCCTTCCAAAGTCAGCACTCTACACTCTTGAATGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334546.6
CDS-3UTR GCA 90 bp GCAGGATTCCTAGGATTGTTAACTCTCACTGTACTGTACCTTGTTTATAGCATACCTGTTCTAGAGAGCTaGAGTTGGGCTTTGCTAGAA +
Preference number: 4 (lower is better)
Translates to: AGFLGLLTLTVLYLVYSIPVLES*SWALLE
Trigger: TTCTAGCAAAGCCCAACTGCAGCTCTCTAGAACAGG...TATGCTATAAACAAGGTACAGTACAGTGAGAGTTAACAATCCTAGGAATCCTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR GCA 90 bp TGGTACATTCAAGAGTGTAGAGTGCTGACTTTGGAAGGCGATGGTACCACTTCTAAACCAAACAAAATCTaGATAGCTCATTCTTCCCTC +
Preference number: 4 (lower is better)
Translates to: WYIQECRVLTLEGDGTTSKPNKI*IAHSSL
Trigger: GAGGGAAGAATGAGCTATGCAGATTTTGTTTGGTTT...AGAAGTGGTACCATCGCCTTCCAAAGTCAGCACTCTACACTCTTGAATGTACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264977.8
ENST00000334546.6
CDS-3UTR CCA 90 bp TGGTACATTCAAGAGTGTAGAGTGCTGACTTTGGAAGGCGATGGTACCACTTCTTCAGAAGCTGAGAGCTaGACAACATCTTCATATTTA +
Preference number: 4 (lower is better)
Translates to: WYIQECRVLTLEGDGTTSSEAES*TTSSYL
Trigger: TAAATATGAAGATGTTGTCCAGCTCTCAGCTTCTGA...AGAAGTGGTACCATCGCCTTCCAAAGTCAGCACTCTACACTCTTGAATGTACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR CCA 90 bp CTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTTGGAGAAATCAAAGTCTGGCTGGAGGTGGGAGTaGTGTTCCAGGTTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: LKNKVPSADDTHLEKSKSGWRWE*CSRFLF
Trigger: GAAAAGAAACCTGGAACACCACTCCCACCTCCAGCC...AGACTTTGATTTCTCCAAGTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000490467.5
CDS-3UTR CCA 90 bp GTGTATCCAGACCTATTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACACAACATTATTCACATaGGGAACCGGGGAGAGAGGT +
Preference number: 4 (lower is better)
Translates to: VYPDLLLKNKVPSADDTHTTLFT*GTGERG
Trigger: ACCTCTCTCCCCGGTTCCCCATGTGAATAATGTTGT...GTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAATAGGTCTGGATACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000490467.5
CDS-3UTR CCA 90 bp TATTCTACCTTAATTCCTCAGAATTCACATTCCTTGCATTCAGCTCCAAGGAAGCTAGAGAGCTGCAGTTaGGCTTTGCTAGAAGACAGA +
Preference number: 4 (lower is better)
Translates to: YSTLIPQNSHSLHSAPRKLESCS*ALLEDR
Trigger: TCTGTCTTCTAGCAAAGCCCAACTGCAGCTCTCTAG...CTTCCTTGGAGCTGAATGCAAGGAATGTGAATTCTGAGGAATTAAGGTAGAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR CCA 90 bp TATCCAGACCTATTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTTGGCGGGAGTGGAATTCTaGAGCATCTTTCAGGAACGT +
Preference number: 4 (lower is better)
Translates to: YPDLLLKNKVPSADDTHLAGVEF*SIFQER
Trigger: ACGTTCCTGAAAGATGCTCCAGAATTCCACTCCCGC...CAAGTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAATAGGTCTGGATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000490467.5
CDS-3UTR CCA 90 bp ATCCAGACCTATTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTTGGACTCCAGCTCATACATaGAGAGTACACCGTCTCCAT +
Preference number: 4 (lower is better)
Translates to: IQTYCLKTKFLVQMIHTWTPAHT*RVHRLH
Trigger: ATGGAGACGGTGTACTCTCCATGTATGAGCTGGAGT...CCAAGTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAATAGGTCTGGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000490467.5
CDS-3UTR CCA 90 bp CCAGACCTATTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTTGGAGTCTTCAAAGCCTTCCTaGAATTGTGCTTGGGCAGAT +
Preference number: 4 (lower is better)
Translates to: PDLLLKNKVPSADDTHLESSKPS*NCAWAD
Trigger: ATCTGCCCAAGCACAATTCCAGGAAGGCTTTGAAGA...CTCCAAGTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAATAGGTCTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000490467.5
CDS-3UTR CCA 90 bp GTGTATCCAGACCTATTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACGGATATTATAGGATTTaGCTGGACTGTGGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: VYPDLLLKNKVPSADDTHGYYRI*LDCGLL
Trigger: CAGCAGGCCACAGTCCAGCCAAATCCTATAATATCC...GTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAATAGGTCTGGATACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR CCA 90 bp TTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTTGGAGAAATCAAAGAAACACAGCCTGCAGTaGGCCTGTTGCTCCTTGTTG +
Preference number: 4 (lower is better)
Translates to: LLKNKVPSADDTHLEKSKKHSLQ*ACCSLL
Trigger: CAACAAGGAGCAACAGGCCCACTGCAGGCTGTGTTT...CTTTGATTTCTCCAAGTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334546.6
CDS-3UTR CCA 90 bp GGTCTACTGAGAGCCCAGGCAGGCATCAGGTGTTCAATAAATATCAACACTGACTTTGTATATCCATCATaGACTGCTAATTTTGCCAAG +
Preference number: 4 (lower is better)
Translates to: GLLRAQAGIRCSININTDFVYPS*TANFAK
Trigger: CTTGGCAAAATTAGCAGTCCATGATGGATATACAAA...GTCAGTGTTGATATTTATTGAACACCTGATGCCTGCCTGGGCTCTCAGTAGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447251.2
CDS-3UTR TCA 90 bp TATTCTACCTTAATTCCTCAGAATTCACATTCCTTGCATTCAGCTCCAAGGAAGTCCCACTGGCAAAACTaGTTGCTTCTCCTGCAATAT +
Preference number: 4 (lower is better)
Translates to: YSTLIPQNSHSLHSAPRKSHWQN*LLLLQY
Trigger: ATATTGCAGGAGAAGCAATCAGTTTTGCCAGTGGGA...CTTCCTTGGAGCTGAATGCAAGGAATGTGAATTCTGAGGAATTAAGGTAGAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR TCA 90 bp TATTCTACCTTAATTCCTCAGAATTCACATTCCTTGCATTCAGCTCCAAGGAAGCAGGTTCGTATCCAGTaGGTTTCTATGAGACAAAGG +
Preference number: 4 (lower is better)
Translates to: YSTLIPQNSHSLHSAPRKQVRIQ*VSMRQR
Trigger: CCTTTGTCTCATAGAAACTCACTGGATACGAACCTG...CTTCCTTGGAGCTGAATGCAAGGAATGTGAATTCTGAGGAATTAAGGTAGAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR TCA 90 bp GTGTATCCAGACCTATTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTTCTCCACATGGCAATaGATGACTGTGCTGTCACAA +
Preference number: 4 (lower is better)
Translates to: VYPDLLLKNKVPSADDTHFSTWQ*MTVLSQ
Trigger: TTGTGACAGCACAGTCATTCATTGCCATGTGGAGAA...GTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAATAGGTCTGGATACAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000490467.5
CDS-3UTR TCA 90 bp AAATTGGAGGAGCCTCCTAAGTTAAATGTGTATCCAGACCTATTGCTTAAAAACCCTGAAGTAGAGGGATaGAATCCTCCTGTTCTAGAG +
Preference number: 4 (lower is better)
Translates to: KLEEPPKLNVYPDLLLKNPEVEG*NPPVLE
Trigger: CTCTAGAACAGGAGGATTTCATCCCTCTACTTCAGG...GTTTTTAAGCAATAGGTCTGGATACACATTTAACTTAGGAGGCTCCTCCAATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000490467.5
CDS-3UTR TCA 90 bp ATCCAGACCTATTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTTGGCAAGTTTTCTGCAAGTaGAGGTTTCTTCTAGGCTCC +
Preference number: 4 (lower is better)
Translates to: IQTYCLKTKFLVQMIHTWQVFCK*RFLLGS
Trigger: GGAGCCTAGAAGAAACCTTCACTTGCAGAAAACTTG...CCAAGTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAATAGGTCTGGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR GCA 90 bp GTGTATCCAGACCTATTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTCAGGATACAGTAGCTaGTGCACATGTGTGGCAAAT +
Preference number: 4 (lower is better)
Translates to: VYPDLLLKNKVPSADDTHSGYSS*CTCVAN
Trigger: ATTTGCCACACATGTGCAGCAGCTACTGTATCCTGA...GTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAATAGGTCTGGATACAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR GCA 90 bp TTGGAGGAGCCTCCTAAGTTAAATGTGTATCCAGACCTATTGCTTAAAAACAAACCTGTTCTAGAGAGCTaGAGTTGGGCTTTGCTAGAA +
Preference number: 4 (lower is better)
Translates to: LEEPPKLNVYPDLLLKNKPVLES*SWALLE
Trigger: TTCTAGCAAAGCCCAACTGCAGCTCTCTAGAACAGG...TTTGTTTTTAAGCAATAGGTCTGGATACACATTTAACTTAGGAGGCTCCTCCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000490467.5
CDS-3UTR GCA 90 bp AAATTGGAGGAGCCTCCTAAGTTAAATGTGTATCCAGACCTATTGCTTAAAAACCTCCATCCACATCCATaGAGCGGAACCAATACTCAA +
Preference number: 4 (lower is better)
Translates to: KLEEPPKLNVYPDLLLKNLHPHP*SGTNTQ
Trigger: TTGAGTATTGGTTCCGCTGCATGGATGTGGATGGAG...GTTTTTAAGCAATAGGTCTGGATACACATTTAACTTAGGAGGCTCCTCCAATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000490467.5
CDS-3UTR GCA 90 bp CTATTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTTGGAGAAATCACTGCAGTGGGCCTGTTaGTCCTTGTTGGTAGCTTTA +
Preference number: 4 (lower is better)
Translates to: LLLKNKVPSADDTHLEKSLQWAC*SLLVAL
Trigger: TAAAGCTACCAACAAGGAGCAACAGGCCCACTGCAG...TGATTTCTCCAAGTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAATAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334546.6
CDS-3UTR CCA 90 bp TTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTTGGAGAAATCAAAGGCGGGAGTGGAATTCTaGAGCATCTTTCAGGAACGT +
Preference number: 4 (lower is better)
Translates to: LLKNKVPSADDTHLEKSKAGVEF*SIFQER
Trigger: ACGTTCCTGAAAGATGCTCCAGAATTCCACTCCCGC...CTTTGATTTCTCCAAGTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000490467.5
CDS-3UTR CCA 90 bp TATCCAGACCTATTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTTGACTCCAGCTCATACATaGAGAGTACACCGTCTCCAT +
Preference number: 4 (lower is better)
Translates to: YPDLLLKNKVPSADDTHLTPAHT*RVHRLH
Trigger: ATGGAGACGGTGTACTCTCCATGTATGAGCTGGAGT...CAAGTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAATAGGTCTGGATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000490467.5
CDS-3UTR CCA 90 bp ATCCAGACCTATTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTTGGTCTTCAAAGCCTTCCTaGAATTGTGCTTGGGCAGAT +
Preference number: 4 (lower is better)
Translates to: IQTYCLKTKFLVQMIHTWSSKPS*NCAWAD
Trigger: ATCTGCCCAAGCACAATTCCAGGAAGGCTTTGAAGA...CCAAGTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAATAGGTCTGGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000490467.5
CDS-3UTR CCA 90 bp CTATTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTTGGAGAAATCAGCTTGCCAGCAAAGTTaGAAGGCCCAGTGGTTACAA +
Preference number: 4 (lower is better)
Translates to: LLLKNKVPSADDTHLEKSACQQS*KAQWLQ
Trigger: TTGTAACCACTGGGCCTTCCAACTTTGCTGGCAAGC...TGATTTCTCCAAGTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAATAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR CCA 90 bp CCAGACCTATTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTTGGAGCTGGTAAAGGCTGGATaGATTGGTAGGAGATTTCAT +
Preference number: 4 (lower is better)
Translates to: PDLLLKNKVPSADDTHLELVKAG*IGRRFH
Trigger: ATGAAATCTCCTACCAATCCATCCAGCCTTTACCAG...CTCCAAGTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAATAGGTCTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR CCA 90 bp TGTATCCAGACCTATTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTGTCCTGACATGCAGCTaGTTCCCAAATACAGTCTGT +
Preference number: 4 (lower is better)
Translates to: CIQTYCLKTKFLVQMIHTVLTCS*FPNTVC
Trigger: ACAGACTGTATTTGGGAACCAGCTGCATGTCAGGAC...AGTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAATAGGTCTGGATACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334546.6
CDS-3UTR TCA 90 bp AAATTGGAGGAGCCTCCTAAGTTAAATGTGTATCCAGACCTATTGCTTAAAAACTCAGATCTGCATCTTTaGACTGAGACACAGGGATGT +
Preference number: 4 (lower is better)
Translates to: KLEEPPKLNVYPDLLLKNSDLHL*TETQGC
Trigger: ACATCCCTGTGTCTCAGTTCAAAGATGCAGATCTGA...GTTTTTAAGCAATAGGTCTGGATACACATTTAACTTAGGAGGCTCCTCCAATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR TCA 90 bp CCAGACCTATTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTTGGAGCTTAGAGTTTGTTCATaGTTACTACAGGTATCTGGG +
Preference number: 4 (lower is better)
Translates to: PDLLLKNKVPSADDTHLELRVCS*LLQVSG
Trigger: CCCAGATACCTGTAGTAATCATGAACAAACTCTAAG...CTCCAAGTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAATAGGTCTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000490467.5
CDS-3UTR TCA 90 bp CTATTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTTGGAGAAATCACCTGAAGTAGAGGGATaGAATCCTCCTGTTCTAGAG +
Preference number: 4 (lower is better)
Translates to: LLLKNKVPSADDTHLEKSPEVEG*NPPVLE
Trigger: CTCTAGAACAGGAGGATTTCATCCCTCTACTTCAGG...TGATTTCTCCAAGTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAATAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000490467.5
CDS-3UTR TCA 90 bp CTATTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTTGGAGAAATCAAAGAGTGTAGAGTGCTaGCTTTGGAAGGCGATGGTA +
Preference number: 4 (lower is better)
Translates to: LLLKNKVPSADDTHLEKSKSVEC*LWKAMV
Trigger: TACCATCGCCTTCCAAAGTCAGCACTCTACACTCTT...TGATTTCTCCAAGTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAATAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264977.8
ENST00000334546.6
CDS-3UTR TCA 90 bp CTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTTGGAGAAATCAAAGTCTAAGAGTGTAGAGTGCTaGCTTTGGAAGGCGATGGTA +
Preference number: 4 (lower is better)
Translates to: LKNKVPSADDTHLEKSKSKSVEC*LWKAMV
Trigger: TACCATCGCCTTCCAAAGTCAGCACTCTACACTCTT...AGACTTTGATTTCTCCAAGTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264977.8
ENST00000334546.6
CDS-3UTR TCA 90 bp GCAGGATTCCTAGGATTGTTAACTCTCACTGTACTGTACCTTGTTTATAGCATATTGAATGGTACACAGTaGCAAGATGCAGGGAAGATA +
Preference number: 4 (lower is better)
Translates to: AGFLGLLTLTVLYLVYSILNGTQ*QDAGKI
Trigger: TATCTTCCCTGCATCTTGTCACTGTGTACCATTCAA...TATGCTATAAACAAGGTACAGTACAGTGAGAGTTAACAATCCTAGGAATCCTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR TCA 90 bp CTATTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTTGGAGAAATCATTGACCTGCACATGTTaGGAATATGGAGCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: LLLKNKVPSADDTHLEKSLTCTC*EYGAFW
Trigger: CCAGAAGGCTCCATATTCTCAACATGTGCAGGTCAA...TGATTTCTCCAAGTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAATAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334546.6
CDS-3UTR TCA 90 bp TATCCAGACCTATTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTTGCTGTGTCTGCTGAAATaGCTTCAGCCGCTTCTTAAA +
Preference number: 4 (lower is better)
Translates to: YPDLLLKNKVPSADDTHLLCLLK*LQPLLK
Trigger: TTTAAGAAGCGGCTGAAGTCATTTCAGCAGACACAG...CAAGTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAATAGGTCTGGATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334546.6
CDS-3UTR GCA 90 bp TTGGAGGAGCCTCCTAAGTTAAATGTGTATCCAGACCTATTGCTTAAAAACAAAGATGTGCAAGAGGTCTaGACAAACACTATGGTGTAC +
Preference number: 4 (lower is better)
Translates to: LEEPPKLNVYPDLLLKNKDVQEV*TNTMVY
Trigger: GTACACCATAGTGTTTGTGCAGACCTCTTGCACATC...TTTGTTTTTAAGCAATAGGTCTGGATACACATTTAACTTAGGAGGCTCCTCCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR GCA 90 bp GTGTATCCAGACCTATTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACGTGATAGGCTCCCTCTaGTTGATTTGCATTCAACTA +
Preference number: 4 (lower is better)
Translates to: VYPDLLLKNKVPSADDTHVIGSL*LICIQL
Trigger: TAGTTGAATGCAAATCAAGCAGAGGGAGCCTATCAC...GTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAATAGGTCTGGATACAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR GCA 90 bp ATCCAGACCTATTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTTGGAGATGTGAGCCATTCTaGACCTCTTCAGATCTCTTA +
Preference number: 4 (lower is better)
Translates to: IQTYCLKTKFLVQMIHTWRCEPF*TSSDLL
Trigger: TAAGAGATCTGAAGAGGTGCAGAATGGCTCACATCT...CCAAGTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAATAGGTCTGGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000490467.5
CDS-3UTR GCA 90 bp TTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTTGGAGAAATCAAAGTTGGGCAGATTCCTCTaGAACAAGCGTCTCATACTC +
Preference number: 4 (lower is better)
Translates to: LLKNKVPSADDTHLEKSKLGRFL*NKRLIL
Trigger: GAGTATGAGACGCTTGTTGCAGAGGAATCTGCCCAA...CTTTGATTTCTCCAAGTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000490467.5
CDS-3UTR GCA 90 bp TGTATCCAGACCTATTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTATGCTTGTCCTGACATaGAGCTGGTTCCCAAATACA +
Preference number: 4 (lower is better)
Translates to: CIQTYCLKTKFLVQMIHTMLVLT*SWFPNT
Trigger: TGTATTTGGGAACCAGCTGCATGTCAGGACAAGCAT...AGTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAATAGGTCTGGATACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334546.6
CDS-3UTR CCA 90 bp GCAGGATTCCTAGGATTGTTAACTCTCACTGTACTGTACCTTGTTTATAGCATAGACTGTGATTGGACCTaGACAGCTTTTAGAGTTCTA +
Preference number: 4 (lower is better)
Translates to: AGFLGLLTLTVLYLVYSIDCDWT*TAFRVL
Trigger: TAGAACTCTAAAAGCTGTCCAGGTCCAATCACAGTC...TATGCTATAAACAAGGTACAGTACAGTGAGAGTTAACAATCCTAGGAATCCTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR CCA 90 bp TTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTTGGAGAAATCAAAGACAACATTATTCACATaGGGAACCGGGGAGAGAGGT +
Preference number: 4 (lower is better)
Translates to: LLKNKVPSADDTHLEKSKTTLFT*GTGERG
Trigger: ACCTCTCTCCCCGGTTCCCCATGTGAATAATGTTGT...CTTTGATTTCTCCAAGTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000490467.5
CDS-3UTR CCA 90 bp TTATTACTAGGGCTAAGTCAATTCTGGAGGCCCTTACTACTTTTTCAAGTTCCAACCGTGGAATGTTTATaGACAATGGCGCATTCACAA +
Preference number: 4 (lower is better)
Translates to: LLLGLSQFWRPLLLFQVPTVECL*TMAHSQ
Trigger: TTGTGAATGCGCCATTGTCCATAAACATTCCACGGT...TGGAACTTGAAAAAGTAGTAAGGGCCTCCAGAATTGACTTAGCCCTAGTAATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR CCA 90 bp GTGTATCCAGACCTATTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACACCGTGGAATGTTTATaGACAATGGCGCATTCACAA +
Preference number: 4 (lower is better)
Translates to: VYPDLLLKNKVPSADDTHTVECL*TMAHSQ
Trigger: TTGTGAATGCGCCATTGTCCATAAACATTCCACGGT...GTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAATAGGTCTGGATACAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000490467.5
CDS-3UTR CCA 90 bp TTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTTGGAGAAATCAAAGCTAGAGAGCTGCAGTTaGGCTTTGCTAGAAGACAGA +
Preference number: 4 (lower is better)
Translates to: LLKNKVPSADDTHLEKSKLESCS*ALLEDR
Trigger: TCTGTCTTCTAGCAAAGCCCAACTGCAGCTCTCTAG...CTTTGATTTCTCCAAGTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000490467.5
CDS-3UTR CCA 90 bp TATCCAGACCTATTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTTGCTGCTTGATGAAGCCTaGTCATTGTATCGAGACAGA +
Preference number: 4 (lower is better)
Translates to: YPDLLLKNKVPSADDTHLLLDEA*SLYRDR
Trigger: TCTGTCTCGATACAATGACCAGGCTTCATCAAGCAG...CAAGTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAATAGGTCTGGATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000490467.5
CDS-3UTR CCA 90 bp TTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTTGGAGAAATCAAAGACTCCAGCTCATACATaGAGAGTACACCGTCTCCAT +
Preference number: 4 (lower is better)
Translates to: LLKNKVPSADDTHLEKSKTPAHT*RVHRLH
Trigger: ATGGAGACGGTGTACTCTCCATGTATGAGCTGGAGT...CTTTGATTTCTCCAAGTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000490467.5
CDS-3UTR CCA 90 bp GTGTATCCAGACCTATTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTGGCACAGTAAATCATaGAATGGCAAGGGCTCAATT +
Preference number: 4 (lower is better)
Translates to: VYPDLLLKNKVPSADDTHWHSKS*NGKGSI
Trigger: AATTGAGCCCTTGCCATTCCATGATTTACTGTGCCA...GTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAATAGGTCTGGATACAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000490467.5
CDS-3UTR CCA 90 bp ATCCAGACCTATTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTTGGTGGCACAGTAAATCATaGAATGGCAAGGGCTCAATT +
Preference number: 4 (lower is better)
Translates to: IQTYCLKTKFLVQMIHTWWHSKS*NGKGSI
Trigger: AATTGAGCCCTTGCCATTCCATGATTTACTGTGCCA...CCAAGTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAATAGGTCTGGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000490467.5
CDS-3UTR CCA 90 bp AAATTGGAGGAGCCTCCTAAGTTAAATGTGTATCCAGACCTATTGCTTAAAAACTCTTCAAAGCCTTCCTaGAATTGTGCTTGGGCAGAT +
Preference number: 4 (lower is better)
Translates to: KLEEPPKLNVYPDLLLKNSSKPS*NCAWAD
Trigger: ATCTGCCCAAGCACAATTCCAGGAAGGCTTTGAAGA...GTTTTTAAGCAATAGGTCTGGATACACATTTAACTTAGGAGGCTCCTCCAATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000490467.5
CDS-3UTR CCA 90 bp TTATTACTAGGGCTAAGTCAATTCTGGAGGCCCTTACTACTTTTTCAAGTTCCAGGGCTAAGTCAATTCTaGAGGCCCTTACTACTTTTT +
Preference number: 4 (lower is better)
Translates to: LLLGLSQFWRPLLLFQVPGLSQF*RPLLLF
Trigger: AAAAAGTAGTAAGGGCCTCCAGAATTGACTTAGCCC...TGGAACTTGAAAAAGTAGTAAGGGCCTCCAGAATTGACTTAGCCCTAGTAATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR CCA 90 bp CTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTTGGAGAAATCAAAGTCTGATTTGGCTGGACTGTaGCCTGCTGAAAAATGTAGG +
Preference number: 4 (lower is better)
Translates to: LKNKVPSADDTHLEKSKSDLAGL*PAEKCR
Trigger: CCTACATTTTTCAGCAGGCCACAGTCCAGCCAAATC...AGACTTTGATTTCTCCAAGTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR CCA 90 bp CTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTTGGAGAAATCAAAGTCTGACTTTGTAAGAGAATaGGGTCTTGCTCTGTCGCCT +
Preference number: 4 (lower is better)
Translates to: LKNKVPSADDTHLEKSKSDFVRE*GLALSP
Trigger: AGGCGACAGAGCAAGACCCCATTCTCTTACAAAGTC...AGACTTTGATTTCTCCAAGTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR CCA 90 bp TTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTTGGAGAAATCAAAGCCCAAATACAGTCTGTaGCTCCCAATACCTGCTCAT +
Preference number: 4 (lower is better)
Translates to: LLKNKVPSADDTHLEKSKPKYSL*LPIPAH
Trigger: ATGAGCAGGTATTGGGAGCCACAGACTGTATTTGGG...CTTTGATTTCTCCAAGTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334546.6
CDS-3UTR TCA 90 bp TTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTTGGAGAAATCAAAGTTCTCCACATGGCAATaGATGACTGTGCTGTCACAA +
Preference number: 4 (lower is better)
Translates to: LLKNKVPSADDTHLEKSKFSTWQ*MTVLSQ
Trigger: TTGTGACAGCACAGTCATTCATTGCCATGTGGAGAA...CTTTGATTTCTCCAAGTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000490467.5
CDS-3UTR TCA 90 bp CCAGACCTATTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTTGGAGCTATTCTTCATCCACTaGTTGAAGCTTTCCACATTT +
Preference number: 4 (lower is better)
Translates to: PDLLLKNKVPSADDTHLELFFIH*LKLSTF
Trigger: AAATGTGGAAAGCTTCAATCAGTGGATGAAGAATAG...CTCCAAGTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAATAGGTCTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000490467.5
CDS-3UTR GCA 90 bp TTGGAGGAGCCTCCTAAGTTAAATGTGTATCCAGACCTATTGCTTAAAAACAAAGGATACAGTAGCTGCTaGACATGTGTGGCAAATTTA +
Preference number: 4 (lower is better)
Translates to: LEEPPKLNVYPDLLLKNKGYSSC*TCVANL
Trigger: TAAATTTGCCACACATGTGCAGCAGCTACTGTATCC...TTTGTTTTTAAGCAATAGGTCTGGATACACATTTAACTTAGGAGGCTCCTCCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR GCA 90 bp GTGTATCCAGACCTATTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACCATAGAGTTCAGATCTaGATCTTTGAACTGAGACAC +
Preference number: 4 (lower is better)
Translates to: VYPDLLLKNKVPSADDTHHRVQI*IFELRH
Trigger: GTGTCTCAGTTCAAAGATGCAGATCTGAACTCTATG...GTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAATAGGTCTGGATACAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR GCA 90 bp CAGACCTATTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTTGGAGATCCCTTTCTGTAAGCTaGATGGTTAGAGTTTTTGAG +
Preference number: 4 (lower is better)
Translates to: QTYCLKTKFLVQMIHTWRSLSVS*MVRVFE
Trigger: CTCAAAAACTCTAACCATGCAGCTTACAGAAAGGGA...TCTCCAAGTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAATAGGTCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR GCA 90 bp ATCCAGACCTATTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTTGGACAGCCACAGACCTTTaGAATTTTCCCCATTTCATA +
Preference number: 4 (lower is better)
Translates to: IQTYCLKTKFLVQMIHTWTATDL*NFPHFI
Trigger: TATGAAATGGGGAAAATTGCAAAGGTCTGTGGCTGT...CCAAGTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAATAGGTCTGGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000490467.5
CDS-3UTR GCA 90 bp TATTCTACCTTAATTCCTCAGAATTCACATTCCTTGCATTCAGCTCCAAGGAAGTTTTCCCCTTGTTACTaGACCAGAGAATATCCTTTC +
Preference number: 4 (lower is better)
Translates to: YSTLIPQNSHSLHSAPRKFSPCY*TREYPF
Trigger: GAAAGGATATTCTCTGGTGCAGTAACAAGGGGAAAA...CTTCCTTGGAGCTGAATGCAAGGAATGTGAATTCTGAGGAATTAAGGTAGAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR GCA 90 bp ATCCAGACCTATTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTTGGCTCTTAGAGTTATTTTaGCATCAACAGCTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: IQTYCLKTKFLVQMIHTWLLELF*HQQLAS
Trigger: TGAAGCCAGCTGTTGATGGCAAAATAACTCTAAGAG...CCAAGTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAATAGGTCTGGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000490467.5
CDS-3UTR GCA 90 bp TATCCAGACCTATTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTTGAGATGTGAGCCATTCTaGACCTCTTCAGATCTCTTA +
Preference number: 4 (lower is better)
Translates to: YPDLLLKNKVPSADDTHLRCEPF*TSSDLL
Trigger: TAAGAGATCTGAAGAGGTGCAGAATGGCTCACATCT...CAAGTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAATAGGTCTGGATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000490467.5
CDS-3UTR GCA 90 bp TGTATCCAGACCTATTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTAGAATTCACATTCCTTaGATTCAGCTCCAAGGAAGG +
Preference number: 4 (lower is better)
Translates to: CIQTYCLKTKFLVQMIHTRIHIP*IQLQGR
Trigger: CCTTCCTTGGAGCTGAATGCAAGGAATGTGAATTCT...AGTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAATAGGTCTGGATACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR CCA 90 bp GTGTATCCAGACCTATTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACAAATCCACTTACTGGTaGGACTTGGAACTTTCTAGA +
Preference number: 4 (lower is better)
Translates to: VYPDLLLKNKVPSADDTHKSTYW*DLELSR
Trigger: TCTAGAAAGTTCCAAGTCCCACCAGTAAGTGGATTT...GTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAATAGGTCTGGATACAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR CCA 90 bp TATTCTACCTTAATTCCTCAGAATTCACATTCCTTGCATTCAGCTCCAAGGAAGAATCTTGATCACCTCTaGAGTCTGCTGAATCAAAAC +
Preference number: 4 (lower is better)
Translates to: YSTLIPQNSHSLHSAPRKNLDHL*SLLNQN
Trigger: GTTTTGATTCAGCAGACTCCAGAGGTGATCAAGATT...CTTCCTTGGAGCTGAATGCAAGGAATGTGAATTCTGAGGAATTAAGGTAGAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR CCA 90 bp TATTCTACCTTAATTCCTCAGAATTCACATTCCTTGCATTCAGCTCCAAGGAAGAGGAAAGTAGAACCGTaGAATGTTTATGGACAATGG +
Preference number: 4 (lower is better)
Translates to: YSTLIPQNSHSLHSAPRKRKVEP*NVYGQW
Trigger: CCATTGTCCATAAACATTCCACGGTTCTACTTTCCT...CTTCCTTGGAGCTGAATGCAAGGAATGTGAATTCTGAGGAATTAAGGTAGAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR CCA 90 bp CCTCCTAAGTTAAATGTGTATCCAGACCTATTGCTTAAAAACAAAGTTCCTAGTCTGCTTGATGAAGCCTaGTCATTGTATCGAGACAGA +
Preference number: 4 (lower is better)
Translates to: PPKLNVYPDLLLKNKVPSLLDEA*SLYRDR
Trigger: TCTGTCTCGATACAATGACCAGGCTTCATCAAGCAG...ACTAGGAACTTTGTTTTTAAGCAATAGGTCTGGATACACATTTAACTTAGGAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000490467.5
CDS-3UTR CCA 90 bp GTGTATCCAGACCTATTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACACTAGGTCAAGCATCTaGCACAGTAAATCATGGAAT +
Preference number: 4 (lower is better)
Translates to: VYPDLLLKNKVPSADDTHTRSSI*HSKSWN
Trigger: ATTCCATGATTTACTGTGCCAGATGCTTGACCTAGT...GTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAATAGGTCTGGATACAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000490467.5
CDS-3UTR CCA 90 bp CTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTTGGAGAAATCAAAGTCTGTTCATTTCACTGCTTaGCCTTTATGCCAGCAAGGA +
Preference number: 4 (lower is better)
Translates to: LKNKVPSADDTHLEKSKSVHFTA*PLCQQG
Trigger: TCCTTGCTGGCATAAAGGCCAAGCAGTGAAATGAAC...AGACTTTGATTTCTCCAAGTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264977.8
3UTR CAA 72 bp GAGGAGCCTCCTAAGTTAAATGTGTATCCAGACCTATaGCTTAAAAACAAAGTTCCTAGTGCAGATGATACA +
Preference number: 4 (lower is better)
Translates to: EEPPKLNVYPDL*LKNKVPSADDT
Trigger: TGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAATAGGTCTGGATACACATTTAACTTAGGAGGCTCCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000490467.5
CDS-3UTR TCA 90 bp TTGGAGGAGCCTCCTAAGTTAAATGTGTATCCAGACCTATTGCTTAAAAACAAACTTAGAGTTTGTTCATaGTTACTACAGGTATCTGGG +
Preference number: 4 (lower is better)
Translates to: LEEPPKLNVYPDLLLKNKLRVCS*LLQVSG
Trigger: CCCAGATACCTGTAGTAATCATGAACAAACTCTAAG...TTTGTTTTTAAGCAATAGGTCTGGATACACATTTAACTTAGGAGGCTCCTCCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000490467.5
CDS-3UTR TCA 90 bp TTATTACTAGGGCTAAGTCAATTCTGGAGGCCCTTACTACTTTTTCAAGTTCCATTAGAGGCATCATCATaGTGGTTATTCAGCAACTTT +
Preference number: 4 (lower is better)
Translates to: LLLGLSQFWRPLLLFQVPLEASS*WLFSNF
Trigger: AAAGTTGCTGAATAACCATCATGATGATGCCTCTAA...TGGAACTTGAAAAAGTAGTAAGGGCCTCCAGAATTGACTTAGCCCTAGTAATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR TCA 90 bp CAGACCTATTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTTGGAGATTAGAGGCATCATCATaGTGGTTATTCAGCAACTTT +
Preference number: 4 (lower is better)
Translates to: QTYCLKTKFLVQMIHTWRLEASS*WLFSNF
Trigger: AAAGTTGCTGAATAACCATCATGATGATGCCTCTAA...TCTCCAAGTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAATAGGTCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000490467.5
CDS-3UTR TCA 90 bp AAATTGGAGGAGCCTCCTAAGTTAAATGTGTATCCAGACCTATTGCTTAAAAACCACTCCAAGATCTGTTaGCTGTGTAGAATATTCTCT +
Preference number: 4 (lower is better)
Translates to: KLEEPPKLNVYPDLLLKNHSKIC*LCRIFS
Trigger: AGAGAATATTCTACACAGTCAACAGATCTTGGAGTG...GTTTTTAAGCAATAGGTCTGGATACACATTTAACTTAGGAGGCTCCTCCAATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000490467.5
CDS-3UTR TCA 90 bp TTATTACTAGGGCTAAGTCAATTCTGGAGGCCCTTACTACTTTTTCAAGTTCCAAGTTCCAGAATTTTCTaGCTCAAGTTTTCTGCAAGT +
Preference number: 4 (lower is better)
Translates to: LLLGLSQFWRPLLLFQVPSSRIF*LKFSAS
Trigger: ACTTGCAGAAAACTTGAGTCAGAAAATTCTGGAACT...TGGAACTTGAAAAAGTAGTAAGGGCCTCCAGAATTGACTTAGCCCTAGTAATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR GCA 90 bp TTGGAGGAGCCTCCTAAGTTAAATGTGTATCCAGACCTATTGCTTAAAAACAAAACTGGCAAAACTGATTaGTTCTCCTGCAATATCCTT +
Preference number: 4 (lower is better)
Translates to: LEEPPKLNVYPDLLLKNKTGKTD*FSCNIL
Trigger: AAGGATATTGCAGGAGAAGCAATCAGTTTTGCCAGT...TTTGTTTTTAAGCAATAGGTCTGGATACACATTTAACTTAGGAGGCTCCTCCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR GCA 90 bp TTGGAGGAGCCTCCTAAGTTAAATGTGTATCCAGACCTATTGCTTAAAAACAAATTTTCCCCTTGTTACTaGACCAGAGAATATCCTTTC +
Preference number: 4 (lower is better)
Translates to: LEEPPKLNVYPDLLLKNKFSPCY*TREYPF
Trigger: GAAAGGATATTCTCTGGTGCAGTAACAAGGGGAAAA...TTTGTTTTTAAGCAATAGGTCTGGATACACATTTAACTTAGGAGGCTCCTCCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000490467.5
CDS-3UTR GCA 90 bp AAATTGGAGGAGCCTCCTAAGTTAAATGTGTATCCAGACCTATTGCTTAAAAACTTTTCCCCTTGTTACTaGACCAGAGAATATCCTTTC +
Preference number: 4 (lower is better)
Translates to: KLEEPPKLNVYPDLLLKNFSPCY*TREYPF
Trigger: GAAAGGATATTCTCTGGTGCAGTAACAAGGGGAAAA...GTTTTTAAGCAATAGGTCTGGATACACATTTAACTTAGGAGGCTCCTCCAATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000490467.5
CDS-3UTR GCA 90 bp GTGTATCCAGACCTATTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACAAACCAAACAAAATCTaGATAGCTCATTCTTCCCTC +
Preference number: 4 (lower is better)
Translates to: VYPDLLLKNKVPSADDTHKPNKI*IAHSSL
Trigger: GAGGGAAGAATGAGCTATGCAGATTTTGTTTGGTTT...GTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAATAGGTCTGGATACAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000490467.5
CDS-3UTR GCA 90 bp AAATTGGAGGAGCCTCCTAAGTTAAATGTGTATCCAGACCTATTGCTTAAAAACCTCTTAGAGTTATTTTaGCATCAACAGCTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: KLEEPPKLNVYPDLLLKNLLELF*HQQLAS
Trigger: TGAAGCCAGCTGTTGATGGCAAAATAACTCTAAGAG...GTTTTTAAGCAATAGGTCTGGATACACATTTAACTTAGGAGGCTCCTCCAATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000490467.5
CDS-3UTR CCA 90 bp TGTATCCAGACCTATTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTCTTACTGGTGGGACTTaGAACTTTCTAGAACTTGTT +
Preference number: 4 (lower is better)
Translates to: CIQTYCLKTKFLVQMIHTLTGGT*NFLELV
Trigger: AACAAGTTCTAGAAAGTTCCAAGTCCCACCAGTAAG...AGTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAATAGGTCTGGATACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR CCA 90 bp TTGGAGGAGCCTCCTAAGTTAAATGTGTATCCAGACCTATTGCTTAAAAACAAAGTTAATGACTGTGATTaGACCTGGACAGCTTTTAGA +
Preference number: 4 (lower is better)
Translates to: LEEPPKLNVYPDLLLKNKVNDCD*TWTAFR
Trigger: TCTAAAAGCTGTCCAGGTCCAATCACAGTCATTAAC...TTTGTTTTTAAGCAATAGGTCTGGATACACATTTAACTTAGGAGGCTCCTCCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR CCA 90 bp CCTCCTAAGTTAAATGTGTATCCAGACCTATTGCTTAAAAACAAAGTTCCTAGTACCGTGGAATGTTTATaGACAATGGCGCATTCACAA +
Preference number: 4 (lower is better)
Translates to: PPKLNVYPDLLLKNKVPSTVECL*TMAHSQ
Trigger: TTGTGAATGCGCCATTGTCCATAAACATTCCACGGT...ACTAGGAACTTTGTTTTTAAGCAATAGGTCTGGATACACATTTAACTTAGGAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000490467.5
CDS-3UTR CCA 90 bp AAATTGGAGGAGCCTCCTAAGTTAAATGTGTATCCAGACCTATTGCTTAAAAACAGGAAAGTAGAACCGTaGAATGTTTATGGACAATGG +
Preference number: 4 (lower is better)
Translates to: KLEEPPKLNVYPDLLLKNRKVEP*NVYGQW
Trigger: CCATTGTCCATAAACATTCCACGGTTCTACTTTCCT...GTTTTTAAGCAATAGGTCTGGATACACATTTAACTTAGGAGGCTCCTCCAATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000490467.5
CDS-3UTR CCA 90 bp CTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTTGGAGAAATCAAAGTCTTGGCACAGTAAATCATaGAATGGCAAGGGCTCAATT +
Preference number: 4 (lower is better)
Translates to: LKNKVPSADDTHLEKSKSWHSKS*NGKGSI
Trigger: AATTGAGCCCTTGCCATTCCATGATTTACTGTGCCA...AGACTTTGATTTCTCCAAGTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000490467.5
CDS-3UTR CCA 90 bp TTGGAGGAGCCTCCTAAGTTAAATGTGTATCCAGACCTATTGCTTAAAAACAAAACTAGGTCAAGCATCTaGCACAGTAAATCATGGAAT +
Preference number: 4 (lower is better)
Translates to: LEEPPKLNVYPDLLLKNKTRSSI*HSKSWN
Trigger: ATTCCATGATTTACTGTGCCAGATGCTTGACCTAGT...TTTGTTTTTAAGCAATAGGTCTGGATACACATTTAACTTAGGAGGCTCCTCCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000490467.5
CDS-3UTR CCA 90 bp CTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTTGGAGAAATCAAAGTCTTCGCCAAGAGATCCTTaGTACATTCAAGAGTGTAGA +
Preference number: 4 (lower is better)
Translates to: LKNKVPSADDTHLEKSKSSPRDP*YIQECR
Trigger: TCTACACTCTTGAATGTACCAAGGATCTCTTGGCGA...AGACTTTGATTTCTCCAAGTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR CCA 90 bp AAATTGGAGGAGCCTCCTAAGTTAAATGTGTATCCAGACCTATTGCTTAAAAACTTGATGACTGACAGATaGATATTAAGTTGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: KLEEPPKLNVYPDLLLKNLMTDR*ILSCLG
Trigger: CCCCAAGCAACTTAATATCCATCTGTCAGTCATCAA...GTTTTTAAGCAATAGGTCTGGATACACATTTAACTTAGGAGGCTCCTCCAATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR TCA 90 bp CCTCCTAAGTTAAATGTGTATCCAGACCTATTGCTTAAAAACAAAGTTCCTAGTTCCAGTGAGTTTCTATaGGACAAAGGTTTTTCCTCA +
Preference number: 4 (lower is better)
Translates to: PPKLNVYPDLLLKNKVPSSSEFL*DKGFSS
Trigger: TGAGGAAAAACCTTTGTCTCATAGAAACTCACTGGA...ACTAGGAACTTTGTTTTTAAGCAATAGGTCTGGATACACATTTAACTTAGGAGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR TCA 90 bp TGTATCCAGACCTATTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTTGCAATTCAATAGTTTaGAATCGTCCAGAGTCAGAA +
Preference number: 4 (lower is better)
Translates to: CIQTYCLKTKFLVQMIHTCNSIV*NRPESE
Trigger: TTCTGACTCTGGACGATTTCAAACTATTGAATTGCA...AGTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAATAGGTCTGGATACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR TCA 90 bp AAATTGGAGGAGCCTCCTAAGTTAAATGTGTATCCAGACCTATTGCTTAAAAACTTAGAGGCATCATCATaGTGGTTATTCAGCAACTTT +
Preference number: 4 (lower is better)
Translates to: KLEEPPKLNVYPDLLLKNLEASS*WLFSNF
Trigger: AAAGTTGCTGAATAACCATCATGATGATGCCTCTAA...GTTTTTAAGCAATAGGTCTGGATACACATTTAACTTAGGAGGCTCCTCCAATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000490467.5
CDS-3UTR TCA 90 bp CTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTTGGAGAAATCAAAGTCTCACTCCAAGATCTGTTaGCTGTGTAGAATATTCTCT +
Preference number: 4 (lower is better)
Translates to: LKNKVPSADDTHLEKSKSHSKIC*LCRIFS
Trigger: AGAGAATATTCTACACAGTCAACAGATCTTGGAGTG...AGACTTTGATTTCTCCAAGTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000490467.5
CDS-3UTR TCA 90 bp TGTATCCAGACCTATTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTCTATTCTTCATCCACTaGTTGAAGCTTTCCACATTT +
Preference number: 4 (lower is better)
Translates to: CIQTYCLKTKFLVQMIHTLFFIH*LKLSTF
Trigger: AAATGTGGAAAGCTTCAATCAGTGGATGAAGAATAG...AGTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAATAGGTCTGGATACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000490467.5
CDS-3UTR TCA 90 bp CTATTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTTGGAGAAATCACATAAAAGAAGTCTCTaGGATGTTTTGGCAGTGCTT +
Preference number: 4 (lower is better)
Translates to: LLLKNKVPSADDTHLEKSHKRSL*DVLAVL
Trigger: AAGCACTGCCAAAACATCTCAGAGACTTCTTTTATG...TGATTTCTCCAAGTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAATAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR GCA 90 bp GCAGGATTCCTAGGATTGTTAACTCTCACTGTACTGTACCTTGTTTATAGCATAAAGTCTGTAAGTTGCTaGCATAATATCAAATCCACT +
Preference number: 4 (lower is better)
Translates to: AGFLGLLTLTVLYLVYSIKSVSC*HNIKST
Trigger: AGTGGATTTGATATTATGGCAGCAACTTACAGACTT...TATGCTATAAACAAGGTACAGTACAGTGAGAGTTAACAATCCTAGGAATCCTGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR GCA 90 bp GTGTATCCAGACCTATTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTCATTATTCCCAGACTaGATGAATTCAAATGGTAAC +
Preference number: 4 (lower is better)
Translates to: VYPDLLLKNKVPSADDTHSLFPD*MNSNGN
Trigger: GTTACCATTTGAATTCATGCAGTCTGGGAATAATGA...GTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAATAGGTCTGGATACAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR GCA 90 bp TTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTTGGAGAAATCAAAGACAGCCACAGACCTTTaGAATTTTCCCCATTTCATA +
Preference number: 4 (lower is better)
Translates to: LLKNKVPSADDTHLEKSKTATDL*NFPHFI
Trigger: TATGAAATGGGGAAAATTGCAAAGGTCTGTGGCTGT...CTTTGATTTCTCCAAGTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000490467.5
CDS-3UTR GCA 90 bp TTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTTGGAGAAATCAAAGCTCTTAGAGTTATTTTaGCATCAACAGCTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: LLKNKVPSADDTHLEKSKLLELF*HQQLAS
Trigger: TGAAGCCAGCTGTTGATGGCAAAATAACTCTAAGAG...CTTTGATTTCTCCAAGTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000490467.5
CDS-3UTR CCA 90 bp TTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTTGGAGAAATCAAAGATCAAATCCACTTACTaGTGGGACTTGGAACTTTCT +
Preference number: 4 (lower is better)
Translates to: LLKNKVPSADDTHLEKSKIKSTY*WDLELS
Trigger: AGAAAGTTCCAAGTCCCACCAGTAAGTGGATTTGAT...CTTTGATTTCTCCAAGTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR CCA 90 bp CTATTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTTGGAGAAATCATGGAGTTGTTTGGAATaGATTGTACAGTGTCCATCT +
Preference number: 4 (lower is better)
Translates to: LLLKNKVPSADDTHLEKSWSCLE*IVQCPS
Trigger: AGATGGACACTGTACAATCCATTCCAAACAACTCCA...TGATTTCTCCAAGTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAATAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR GCA 90 bp CTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTTGGAGAAATCAAAGTCTAAACCAAACAAAATCTaGATAGCTCATTCTTCCCTC +
Preference number: 4 (lower is better)
Translates to: LKNKVPSADDTHLEKSKSKPNKI*IAHSSL
Trigger: GAGGGAAGAATGAGCTATGCAGATTTTGTTTGGTTT...AGACTTTGATTTCTCCAAGTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000490467.5
CDS-3UTR GCA 90 bp CTATTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTTGGAGAAATCAAGATGTGCACCACCATaGCCAGCTAAATTTATTTTT +
Preference number: 4 (lower is better)
Translates to: LLLKNKVPSADDTHLEKSRCAPP*PAKFIF
Trigger: AAAAATAAATTTAGCTGGGCATGGTGGTGCACATCT...TGATTTCTCCAAGTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAATAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR CCA 90 bp AAATTGGAGGAGCCTCCTAAGTTAAATGTGTATCCAGACCTATTGCTTAAAAACTATAAACACTTTGAATaGTACACAGTGACAAGATGC +
Preference number: 4 (lower is better)
Translates to: KLEEPPKLNVYPDLLLKNYKHFE*YTVTRC
Trigger: GCATCTTGTCACTGTGTACCATTCAAAGTGTTTATA...GTTTTTAAGCAATAGGTCTGGATACACATTTAACTTAGGAGGCTCCTCCAATTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264977.8
3UTR CAA 72 bp ATATATTCTACCTTAATTCCTCAGAATTCACATTCCTaGCATTCAGCTCCAAGGAAGGAGTACAATAAAACA +
Preference number: 4 (lower is better)
Translates to: IYSTLIPQNSHS*HSAPRKEYNKT
Trigger: TGTTTTATTGTACTCCTTCCTTGGAGCTGAATGCAAGGAATGTGAATTCTGAGGAATTAAGGTAGAATATAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR GCA 90 bp TTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTTGGAGAAATCAAAGAGATGGATATTAAGTTaGTTGGGGGTTTTACTTACA +
Preference number: 4 (lower is better)
Translates to: LLKNKVPSADDTHLEKSKRWILS*LGVLLT
Trigger: TGTAAGTAAAACCCCCAAGCAACTTAATATCCATCT...CTTTGATTTCTCCAAGTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS GCA 90 bp TTGCCCGCGGCTCCTCCTCCGGCGGCTCAGCTCGCGGGCAGCGCTTaGCTCCAAGCCTCCCCGCGGCGCGGACTCTCGGGCTACGAATGC +
Preference number: 5 (lower is better)
Translates to: LPAAPPPAAQLAGSA*LQASPRRGLSGYEC
Trigger: GCATTCGTAGCCCGAGAGTCCGCGCCGCGGGGAGGCTTGGAGGCAAGCGCTGCCCGCGAGCTGAGCCGCCGGAGGAGGAGCCGCGGGCAA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264977.8
ENST00000490467.5
CDS TCA 90 bp GCTGGAGGTGGGAGTGGTGTTCCAGGTTTCTTTTCTGGTTTATTTTaGATCTCGTTGCCCGCGGCTCCTCCTCCGGCGGCTCAGCTCGCG +
Preference number: 5 (lower is better)
Translates to: AGGGSGVPGFFSGLF*ISLPAAPPPAAQLA
Trigger: CGCGAGCTGAGCCGCCGGAGGAGGAGCCGCGGGCAACGAGATTCAAAATAAACCAGAAAAGAAACCTGGAACACCACTCCCACCTCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490467.5
CDS GCA 90 bp GGAGTGGTGTTCCAGGTTTCTTTTCTGGTTTATTTTGAATCTCGTTaGCCGCGGCTCCTCCTCCGGCGGCTCAGCTCGCGGGCAGCGCTT +
Preference number: 5 (lower is better)
Translates to: GVVFQVSFLVYFESR*PRLLLRRLSSRAAL
Trigger: AAGCGCTGCCCGCGAGCTGAGCCGCCGGAGGAGGAGCCGCGGGCAACGAGATTCAAAATAAACCAGAAAAGAAACCTGGAACACCACTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490467.5
CDS TCA 90 bp TGCAACAAGCGTCTCATACTCCTCAGCGGCAAACCGGTCCCAGTCTaGGGGCTCAGGCCCATCGTTCTCAACATCCTTCTGGACCGCAAA +
Preference number: 5 (lower is better)
Translates to: CNKRLILLSGKPVPV*GLRPIVLNILLDRK
Trigger: TTTGCGGTCCAGAAGGATGTTGAGAACGATGGGCCTGAGCCCTCAGACTGGGACCGGTTTGCCGCTGAGGAGTATGAGACGCTTGTTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000469270.1
ENST00000490467.5
CDS-3UTR CAA 90 bp TTTCTTCTAGGCTCCATAGGAGCCCGGAGGGGACTCAGGGATGCCAGCCAACACAATGTAGATCCTCTCTaGACCCTGGGTATGCCTGTG +
Preference number: 5 (lower is better)
Translates to: FLLGSIGARRGLRDASQHNVDPL*TLGMPV
Trigger: CACAGGCATACCCAGGGTCAAGAGAGGATCTACATT...GTGTTGGCTGGCATCCCTGAGTCCCCTCCGGGCTCCTATGGAGCCTAGAAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR CAA 90 bp ATCCAGACCTATTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTTGGGCTCGCGGGCAGCGCTaGCCTCCAAGCCTCCCCGCG +
Preference number: 5 (lower is better)
Translates to: IQTYCLKTKFLVQMIHTWARGQR*PPSLPA
Trigger: CGCGGGGAGGCTTGGAGGCAAGCGCTGCCCGCGAGC...CCAAGTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAATAGGTCTGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264977.8
ENST00000490467.5
CDS TCA 90 bp ATGACTGTGCTGTCACAAATCCTGTCTTCTCTCCCCCTGCAGCCCTaGACATGGGGGCTTTCCAATAGAGAGGACAGCCACAGACCTTTG +
Preference number: 5 (lower is better)
Translates to: MTVLSQILSSLPLQP*TWGLSNREDSHRPL
Trigger: CAAAGGTCTGTGGCTGTCCTCTCTATTGGAAAGCCCCCATGTTCAGGGCTGCAGGGGGAGAGAAGACAGGATTTGTGACAGCACAGTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000447251.2
ENST00000490467.5
CDS-3UTR CAA 90 bp ACCACTTCTGAGGAGAAGCTCCGTAAGAGGTTTGAGGCAAATTGGAGGAGCCTCCCTGCAGTGGGCCTGTaGCTCCTTGTTGGTAGCTTT +
Preference number: 5 (lower is better)
Translates to: TTSEEKLRKRFEANWRSLPAVGL*LLVGSF
Trigger: AAAGCTACCAACAAGGAGCAACAGGCCCACTGCAGG...GAGGCTCCTCCAATTTGCCTCAAACCTCTTACGGAGCTTCTCCTCAGAAGTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334546.6
CDS-3UTR CAA 90 bp CTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTTGGAGAAATCAAAGTCTGCTCGCGGGCAGCGCTaGCCTCCAAGCCTCCCCGCG +
Preference number: 5 (lower is better)
Translates to: LKNKVPSADDTHLEKSKSARGQR*PPSLPA
Trigger: CGCGGGGAGGCTTGGAGGCAAGCGCTGCCCGCGAGC...AGACTTTGATTTCTCCAAGTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264977.8
ENST00000490467.5
CDS-3UTR CAA 90 bp TTTCTTCTAGGCTCCATAGGAGCCCGGAGGGGACTCAGGGATGCCAGCCAACACAATTTGTGGAGTTGTTaGGAATGGATTGTACAGTGT +
Preference number: 5 (lower is better)
Translates to: FLLGSIGARRGLRDASQHNLWSC*EWIVQC
Trigger: ACACTGTACAATCCATTCCAAACAACTCCACAAATT...GTGTTGGCTGGCATCCCTGAGTCCCCTCCGGGCTCCTATGGAGCCTAGAAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR CAA 90 bp CAAGAGTGTAGAGTGCTGACTTTGGAAGGCGATGGTACCACTTCTGAGGAGAAGTGTAGAGTGCTGACTTaGGAAGGCGATGGTACCACT +
Preference number: 5 (lower is better)
Translates to: QECRVLTLEGDGTTSEEKCRVLT*EGDGTT
Trigger: AGTGGTACCATCGCCTTCCAAAGTCAGCACTCTACA...CTTCTCCTCAGAAGTGGTACCATCGCCTTCCAAAGTCAGCACTCTACACTCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264977.8
ENST00000334546.6
CDS-3UTR CAA 90 bp ACCACTTCTGAGGAGAAGCTCCGTAAGAGGTTTGAGGCAAATTGGAGGAGCCTCAATGAAATTCAAGCATaGTGCTCTCCCAGCCTCCAC +
Preference number: 5 (lower is better)
Translates to: TTSEEKLRKRFEANWRSLNEIQA*CSPSLH
Trigger: GTGGAGGCTGGGAGAGCACAATGCTTGAATTTCATT...GAGGCTCCTCCAATTTGCCTCAAACCTCTTACGGAGCTTCTCCTCAGAAGTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334546.6
CDS-3UTR CAA 90 bp CCCAAGGTTCATTTCACTGCTTGGCCTTTATGCCAGCAAGGAGGGAACCTAGGTGCTGAAGTAGTATCTTaGGCTTTATCACCAACAGGA +
Preference number: 5 (lower is better)
Translates to: PKVHFTAWPLCQQGGNLGAEVVS*ALSPTG
Trigger: TCCTGTTGGTGATAAAGCCAAAGATACTACTTCAGC...ACCTAGGTTCCCTCCTTGCTGGCATAAAGGCCAAGCAGTGAAATGAACCTTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR CAA 90 bp ACCACTTCTGAGGAGAAGCTCCGTAAGAGGTTTGAGGCAAATTGGAGGAGCCTCTCTCTTAGAGTTATTTaGCCATCAACAGCTGGCTTC +
Preference number: 5 (lower is better)
Translates to: TTSEEKLRKRFEANWRSLSLRVI*PSTAGF
Trigger: GAAGCCAGCTGTTGATGGCAAAATAACTCTAAGAGA...GAGGCTCCTCCAATTTGCCTCAAACCTCTTACGGAGCTTCTCCTCAGAAGTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264977.8
ENST00000334546.6
CDS-3UTR CAA 90 bp TGGTACATTCAAGAGTGTAGAGTGCTGACTTTGGAAGGCGATGGTACCACTTCTTGTAGAGTGCTGACTTaGGAAGGCGATGGTACCACT +
Preference number: 5 (lower is better)
Translates to: WYIQECRVLTLEGDGTTSCRVLT*EGDGTT
Trigger: AGTGGTACCATCGCCTTCCAAAGTCAGCACTCTACA...AGAAGTGGTACCATCGCCTTCCAAAGTCAGCACTCTACACTCTTGAATGTACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264977.8
ENST00000334546.6
CDS-3UTR CAA 90 bp CCCAAGGTTCATTTCACTGCTTGGCCTTTATGCCAGCAAGGAGGGAACCTAGGTCAGATGGATATTAAGTaGCTTGGGGGTTTTACTTAC +
Preference number: 5 (lower is better)
Translates to: PKVHFTAWPLCQQGGNLGQMDIK*LGGFTY
Trigger: GTAAGTAAAACCCCCAAGCAACTTAATATCCATCTG...ACCTAGGTTCCCTCCTTGCTGGCATAAAGGCCAAGCAGTGAAATGAACCTTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS TCA 90 bp TGCTTGATGAAGCCTGGTCATTGTATCGAGACAGATCGGCCTGGCTaGTGTAGAGGTCGTGATCAGTATCTAGTTCCCAGAATTTACAAT +
Preference number: 5 (lower is better)
Translates to: CLMKPGHCIETDRPG*CRGRDQYLVPRIYN
Trigger: ATTGTAAATTCTGGGAACTAGATACTGATCACGACCTCTACATCAGCCAGGCCGATCTGTCTCGATACAATGACCAGGCTTCATCAAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000490467.5
CDS GCA 90 bp CAGATCTGCATCTTTGAACTGAGACACAGGGATGTGCAAGAGGTCTaGACAAACACTATGGTGTACCACAATGCAGTCAATTCCATGTGT +
Preference number: 5 (lower is better)
Translates to: QICIFELRHRDVQEV*TNTMVYHNAVNSMC
Trigger: ACACATGGAATTGACTGCATTGTGGTACACCATAGTGTTTGTGCAGACCTCTTGCACATCCCTGTGTCTCAGTTCAAAGATGCAGATCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR CAA 90 bp TATCCAGACCTATTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTTGGCCTGTGAAGGCCTGTaGGGGATAGTCTCCTTCAGC +
Preference number: 5 (lower is better)
Translates to: YPDLLLKNKVPSADDTHLACEGL*GIVSFS
Trigger: GCTGAAGGAGACTATCCCCAACAGGCCTTCACAGGC...CAAGTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAATAGGTCTGGATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR CAA 90 bp ACCACTTCTGAGGAGAAGCTCCGTAAGAGGTTTGAGGCAAATTGGAGGAGCCTCCTTTTCTGGTTTATTTaGAATCTTGATCACCTCTGG +
Preference number: 5 (lower is better)
Translates to: TTSEEKLRKRFEANWRSLLFWFI*NLDHLW
Trigger: CCAGAGGTGATCAAGATTCAAAATAAACCAGAAAAG...GAGGCTCCTCCAATTTGCCTCAAACCTCTTACGGAGCTTCTCCTCAGAAGTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR CAA 90 bp TGGTACATTCAAGAGTGTAGAGTGCTGACTTTGGAAGGCGATGGTACCACTTCTGACAGCCACAGACCTTaGCAATTTTCCCCATTTCAT +
Preference number: 5 (lower is better)
Translates to: WYIQECRVLTLEGDGTTSDSHRP*QFSPFH
Trigger: ATGAAATGGGGAAAATTGCAAAGGTCTGTGGCTGTC...AGAAGTGGTACCATCGCCTTCCAAAGTCAGCACTCTACACTCTTGAATGTACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264977.8
ENST00000334546.6
CDS-3UTR CAA 90 bp CTGAGAGCCCAGGCAGGCATCAGGTGTTCAATAAATATCAACACTGACTGTGATGACAGCCACAGACCTTaGCAATTTTCCCCATTTCAT +
Preference number: 5 (lower is better)
Translates to: LRAQAGIRCSININTDCDDSHRP*QFSPFH
Trigger: ATGAAATGGGGAAAATTGCAAAGGTCTGTGGCTGTC...ATCACAGTCAGTGTTGATATTTATTGAACACCTGATGCCTGCCTGGGCTCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447251.2
CDS-3UTR CAA 90 bp CAAGAGTGTAGAGTGCTGACTTTGGAAGGCGATGGTACCACTTCTGAGGAGAAGAGCAAGTTGTCAATCTaGTCAGGTAGGAAGGTATTT +
Preference number: 5 (lower is better)
Translates to: QECRVLTLEGDGTTSEEKSKLSI*SGRKVF
Trigger: AAATACCTTCCTACCTGACAAGATTGACAACTTGCT...CTTCTCCTCAGAAGTGGTACCATCGCCTTCCAAAGTCAGCACTCTACACTCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334546.6
CDS TCA 90 bp TCTTGTGATAGGCTCCCTCTGCTTGATTTGCATTCAACTAGTTCTTaGGCAAAGTCTTCAATGCTTTCCAGGATTCGCAGTAAGAGGGCT +
Preference number: 5 (lower is better)
Translates to: SCDRLPLLDLHSTSS*AKSSMLSRIRSKRA
Trigger: AGCCCTCTTACTGCGAATCCTGGAAAGCATTGAAGACTTTGCTCAAGAACTAGTTGAATGCAAATCAAGCAGAGGGAGCCTATCACAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS GCA 90 bp CACGCTGCTGTAGTGGTTCACAGTACTAACCACAAGTCTGTAAGTTaGTGCCATAATATCAAATCCACTTACTGGTGGGACTTGGAACTT +
Preference number: 5 (lower is better)
Translates to: HAAVVVHSTNHKSVS*CHNIKSTYWWDLEL
Trigger: AAGTTCCAAGTCCCACCAGTAAGTGGATTTGATATTATGGCAGCAACTTACAGACTTGTGGTTAGTACTGTGAACCACTACAGCAGCGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR CAA 90 bp GTGTATCCAGACCTATTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACGATGAAGCCTGGTCATaGTATCGAGACAGATCGGCC +
Preference number: 5 (lower is better)
Translates to: VYPDLLLKNKVPSADDTHDEAWS*YRDRSA
Trigger: GGCCGATCTGTCTCGATACAATGACCAGGCTTCATC...GTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAATAGGTCTGGATACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000490467.5
CDS-3UTR CAA 90 bp CCAGACCTATTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTTGGAGAAAGCCTTCCTGGAATaGTGCTTGGGCAGATTCCTC +
Preference number: 5 (lower is better)
Translates to: PDLLLKNKVPSADDTHLEKAFLE*CLGRFL
Trigger: GAGGAATCTGCCCAAGCACAATTCCAGGAAGGCTTT...CTCCAAGTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAATAGGTCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000490467.5
CDS-3UTR CAA 90 bp TATTCTACCTTAATTCCTCAGAATTCACATTCCTTGCATTCAGCTCCAAGGAAGAGCTCCGTAAGAGGTTaGAGGCAAATTGGAGGAGCC +
Preference number: 5 (lower is better)
Translates to: YSTLIPQNSHSLHSAPRKSSVRG*RQIGGA
Trigger: GGCTCCTCCAATTTGCCTCAAACCTCTTACGGAGCT...CTTCCTTGGAGCTGAATGCAAGGAATGTGAATTCTGAGGAATTAAGGTAGAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR CAA 90 bp AAATTGGAGGAGCCTCCTAAGTTAAATGTGTATCCAGACCTATTGCTTAAAAACGGAGGTTACCAGAGCTaGCCAGCAAAGTTGGAAGGC +
Preference number: 5 (lower is better)
Translates to: KLEEPPKLNVYPDLLLKNGGYQS*PAKLEG
Trigger: GCCTTCCAACTTTGCTGGCAAGCTCTGGTAACCTCC...GTTTTTAAGCAATAGGTCTGGATACACATTTAACTTAGGAGGCTCCTCCAATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS GCA 90 bp GCTGCTGTAGTGGTTCACAGTACTAACCACAAGTCTGTAAGTTGCTaGCATAATATCAAATCCACTTACTGGTGGGACTTGGAACTTTCT +
Preference number: 5 (lower is better)
Translates to: AAVVVHSTNHKSVSC*HNIKSTYWWDLELS
Trigger: AGAAAGTTCCAAGTCCCACCAGTAAGTGGATTTGATATTATGGCAGCAACTTACAGACTTGTGGTTAGTACTGTGAACCACTACAGCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR CAA 90 bp TACATTCAAGAGTGTAGAGTGCTGACTTTGGAAGGCGATGGTACCACTTCTGAGCTGGTAGGATTCCTTTaGTCTTCTTCAGAGATCAAA +
Preference number: 5 (lower is better)
Translates to: YIQECRVLTLEGDGTTSELVGFL*SSSEIK
Trigger: TTTGATCTCTGAAGAAGACAAAAGGAATCCTACCAG...CTCAGAAGTGGTACCATCGCCTTCCAAAGTCAGCACTCTACACTCTTGAATGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264977.8
ENST00000334546.6
CDS-3UTR CAA 90 bp GTGTATCCAGACCTATTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTTCCTGGAATTGTGCTaGGGCAGATTCCTCTGCAAC +
Preference number: 5 (lower is better)
Translates to: VYPDLLLKNKVPSADDTHFLELC*GRFLCN
Trigger: GTTGCAGAGGAATCTGCCCAAGCACAATTCCAGGAA...GTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAATAGGTCTGGATACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000490467.5
CDS-3UTR CAA 90 bp AAATTGGAGGAGCCTCCTAAGTTAAATGTGTATCCAGACCTATTGCTTAAAAACAGCTCCGTAAGAGGTTaGAGGCAAATTGGAGGAGCC +
Preference number: 5 (lower is better)
Translates to: KLEEPPKLNVYPDLLLKNSSVRG*RQIGGA
Trigger: GGCTCCTCCAATTTGCCTCAAACCTCTTACGGAGCT...GTTTTTAAGCAATAGGTCTGGATACACATTTAACTTAGGAGGCTCCTCCAATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000490467.5
CDS-3UTR CAA 90 bp TGTATCCAGACCTATTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTAGCTCCGTAAGAGGTTaGAGGCAAATTGGAGGAGCC +
Preference number: 5 (lower is better)
Translates to: CIQTYCLKTKFLVQMIHTSSVRG*RQIGGA
Trigger: GGCTCCTCCAATTTGCCTCAAACCTCTTACGGAGCT...AGTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAATAGGTCTGGATACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000490467.5
CDS-3UTR CAA 90 bp TGTATCCAGACCTATTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTAGCTTGCCAGCAAAGTaGGAAGGCCCAGTGGTTACA +
Preference number: 5 (lower is better)
Translates to: CIQTYCLKTKFLVQMIHTSLPAK*EGPVVT
Trigger: TGTAACCACTGGGCCTTCCAACTTTGCTGGCAAGCT...AGTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAATAGGTCTGGATACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS TCA 90 bp GTCATTTTGCAATTCAATAGTTTGAAATCGTCCAGAGTCAGAAGCTaGGAGCTGGACAACATCTTCATATTTAGGGGGTTGTTCAGTGCC +
Preference number: 5 (lower is better)
Translates to: VILQFNSLKSSRVRS*ELDNIFIFRGLFSA
Trigger: GGCACTGAACAACCCCCTAAATATGAAGATGTTGTCCAGCTCTCAGCTTCTGACTCTGGACGATTTCAAACTATTGAATTGCAAAATGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS TCA 90 bp CTAGCTCTCCCCTTAAATCCGGGTCCCTTCGTAGAGATGTTTCCTTaGTCATCATCTTTGAAAAGTAAATGTTTACTTCGCAACTGTCCA +
Preference number: 5 (lower is better)
Translates to: LALPLNPGPFVEMFP*SSSLKSKCLLRNCP
Trigger: TGGACAGTTGCGAAGTAAACATTTACTTTTCAAAGATGATGATCAAGGAAACATCTCTACGAAGGGACCCGGATTTAAGGGGAGAGCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334546.6
CDS-3UTR CAA 90 bp TACATTCAAGAGTGTAGAGTGCTGACTTTGGAAGGCGATGGTACCACTTCTGAGGGAAACCATTTATATTaGAGGTTTGGTCACTATCAG +
Preference number: 5 (lower is better)
Translates to: YIQECRVLTLEGDGTTSEGNHLY*RFGHYQ
Trigger: CTGATAGTGACCAAACCTCAAATATAAATGGTTTCC...CTCAGAAGTGGTACCATCGCCTTCCAAAGTCAGCACTCTACACTCTTGAATGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR CAA 90 bp TGGTACATTCAAGAGTGTAGAGTGCTGACTTTGGAAGGCGATGGTACCACTTCTAAGGAATTTGTGGAGTaGTTTGGAATGGATTGTACA +
Preference number: 5 (lower is better)
Translates to: WYIQECRVLTLEGDGTTSKEFVE*FGMDCT
Trigger: TGTACAATCCATTCCAAACAACTCCACAAATTCCTT...AGAAGTGGTACCATCGCCTTCCAAAGTCAGCACTCTACACTCTTGAATGTACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR CAA 90 bp CCAGACCTATTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTTGGAGGACAGCCACAGACCTTaGCAATTTTCCCCATTTCAT +
Preference number: 5 (lower is better)
Translates to: PDLLLKNKVPSADDTHLEDSHRP*QFSPFH
Trigger: ATGAAATGGGGAAAATTGCAAAGGTCTGTGGCTGTC...CTCCAAGTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAATAGGTCTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000490467.5
CDS-3UTR CAA 90 bp CTATTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTTGGAGAAATCAGATGAAGCCTGGTCATaGTATCGAGACAGATCGGCC +
Preference number: 5 (lower is better)
Translates to: LLLKNKVPSADDTHLEKSDEAWS*YRDRSA
Trigger: GGCCGATCTGTCTCGATACAATGACCAGGCTTCATC...TGATTTCTCCAAGTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAATAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000490467.5
CDS-3UTR CAA 90 bp CTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTTGGAGAAATCAAAGTCTGATGAAGCCTGGTCATaGTATCGAGACAGATCGGCC +
Preference number: 5 (lower is better)
Translates to: LKNKVPSADDTHLEKSKSDEAWS*YRDRSA
Trigger: GGCCGATCTGTCTCGATACAATGACCAGGCTTCATC...AGACTTTGATTTCTCCAAGTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000490467.5
CDS-3UTR CAA 90 bp TATCCAGACCTATTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTTGTTCCTGGAATTGTGCTaGGGCAGATTCCTCTGCAAC +
Preference number: 5 (lower is better)
Translates to: YPDLLLKNKVPSADDTHLFLELC*GRFLCN
Trigger: GTTGCAGAGGAATCTGCCCAAGCACAATTCCAGGAA...CAAGTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAATAGGTCTGGATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000490467.5
CDS-3UTR CAA 90 bp AAATTGGAGGAGCCTCCTAAGTTAAATGTGTATCCAGACCTATTGCTTAAAAACTTCCTGGAATTGTGCTaGGGCAGATTCCTCTGCAAC +
Preference number: 5 (lower is better)
Translates to: KLEEPPKLNVYPDLLLKNFLELC*GRFLCN
Trigger: GTTGCAGAGGAATCTGCCCAAGCACAATTCCAGGAA...GTTTTTAAGCAATAGGTCTGGATACACATTTAACTTAGGAGGCTCCTCCAATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000490467.5
CDS-3UTR CAA 90 bp TTGGAGGAGCCTCCTAAGTTAAATGTGTATCCAGACCTATTGCTTAAAAACAAAAAAGCCTTCCTGGAATaGTGCTTGGGCAGATTCCTC +
Preference number: 5 (lower is better)
Translates to: LEEPPKLNVYPDLLLKNKKAFLE*CLGRFL
Trigger: GAGGAATCTGCCCAAGCACAATTCCAGGAAGGCTTT...TTTGTTTTTAAGCAATAGGTCTGGATACACATTTAACTTAGGAGGCTCCTCCAA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000490467.5
CDS-3UTR CAA 90 bp TACATTCAAGAGTGTAGAGTGCTGACTTTGGAAGGCGATGGTACCACTTCTGAGAAAGTGACTAGTAGTTaGGCAGGTAACTGTGAAATT +
Preference number: 5 (lower is better)
Translates to: YIQECRVLTLEGDGTTSEKVTSS*AGNCEI
Trigger: AATTTCACAGTTACCTGCCAAACTACTAGTCACTTT...CTCAGAAGTGGTACCATCGCCTTCCAAAGTCAGCACTCTACACTCTTGAATGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR CAA 90 bp ATCCAGACCTATTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTTGGTGGGCCTGTTGCTCCTaGTTGGTAGCTTTATGTCAA +
Preference number: 5 (lower is better)
Translates to: IQTYCLKTKFLVQMIHTWWACCS*LVALCQ
Trigger: TTGACATAAAGCTACCAACAAGGAGCAACAGGCCCA...CCAAGTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAATAGGTCTGGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334546.6
CDS-3UTR CAA 90 bp CTGAGAGCCCAGGCAGGCATCAGGTGTTCAATAAATATCAACACTGACTGTGATCATGGACTGCTAATTTaGCCAAGTCTTCATTACTTT +
Preference number: 5 (lower is better)
Translates to: LRAQAGIRCSININTDCDHGLLI*PSLHYF
Trigger: AAAGTAATGAAGACTTGGCAAAATTAGCAGTCCATG...ATCACAGTCAGTGTTGATATTTATTGAACACCTGATGCCTGCCTGGGCTCTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447251.2
CDS-3UTR CAA 90 bp ATCCAGACCTATTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTTGGCTTTTCTGGTTTATTTaGAATCTCGTTGCCCGCGGC +
Preference number: 5 (lower is better)
Translates to: IQTYCLKTKFLVQMIHTWLFWFI*NLVARG
Trigger: GCCGCGGGCAACGAGATTCAAAATAAACCAGAAAAG...CCAAGTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAATAGGTCTGGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490467.5
CDS-3UTR CAA 90 bp CTATTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTTGGAGAAATCAAAAGCCTTCCTGGAATaGTGCTTGGGCAGATTCCTC +
Preference number: 5 (lower is better)
Translates to: LLLKNKVPSADDTHLEKSKAFLE*CLGRFL
Trigger: GAGGAATCTGCCCAAGCACAATTCCAGGAAGGCTTT...TGATTTCTCCAAGTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAATAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000490467.5
CDS-3UTR CAA 90 bp CTATTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTTGGAGAAATCATGTAGAGAACCGTGCTaGGTACTGTCGCCAAGAGAT +
Preference number: 5 (lower is better)
Translates to: LLLKNKVPSADDTHLEKSCREPC*VLSPRD
Trigger: ATCTCTTGGCGACAGTACCAAGCACGGTTCTCTACA...TGATTTCTCCAAGTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAATAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR CAA 90 bp TTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTTGGAGAAATCAAAGGGTTCATTTCACTGCTaGGCCTTTATGCCAGCAAGG +
Preference number: 5 (lower is better)
Translates to: LLKNKVPSADDTHLEKSKGSFHC*AFMPAR
Trigger: CCTTGCTGGCATAAAGGCCAAGCAGTGAAATGAACC...CTTTGATTTCTCCAAGTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR CAA 90 bp TTATTACTAGGGCTAAGTCAATTCTGGAGGCCCTTACTACTTTTTCAAGTTCCAGCAGGATTCCTAGGATaGTTAACTCTCACTGTACTG +
Preference number: 5 (lower is better)
Translates to: LLLGLSQFWRPLLLFQVPAGFLG*LTLTVL
Trigger: CAGTACAGTGAGAGTTAACAATCCTAGGAATCCTGC...TGGAACTTGAAAAAGTAGTAAGGGCCTCCAGAATTGACTTAGCCCTAGTAATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS TCA 90 bp CTTCGTTTCATTGTAGACACCGGCAGCTATTCTTCATCCACTGATTaGAGCTTTCCACATTTCTCTGGAAGGCTTGCACTTAATATTTTA +
Preference number: 5 (lower is better)
Translates to: LRFIVDTGSYSSSTD*SFPHFSGRLALNIL
Trigger: TAAAATATTAAGTGCAAGCCTTCCAGAGAAATGTGGAAAGCTTCAATCAGTGGATGAAGAATAGCTGCCGGTGTCTACAATGAAACGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000490467.5
CDS GCA 90 bp TTTGCATCATTTCCTTTTCTTGTGATAGGCTCCCTCTGCTTGATTTaGATTCAACTAGTTCTTGAGCAAAGTCTTCAATGCTTTCCAGGA +
Preference number: 5 (lower is better)
Translates to: FASFPFLVIGSLCLI*IQLVLEQSLQCFPG
Trigger: TCCTGGAAAGCATTGAAGACTTTGCTCAAGAACTAGTTGAATGCAAATCAAGCAGAGGGAGCCTATCACAAGAAAAGGAAATGATGCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS GCA 90 bp CCTGTAGAATTTGCATCATTTCCTTTTCTTGTGATAGGCTCCCTCTaGTTGATTTGCATTCAACTAGTTCTTGAGCAAAGTCTTCAATGC +
Preference number: 5 (lower is better)
Translates to: PVEFASFPFLVIGSL*LICIQLVLEQSLQC
Trigger: GCATTGAAGACTTTGCTCAAGAACTAGTTGAATGCAAATCAAGCAGAGGGAGCCTATCACAAGAAAAGGAAATGATGCAAATTCTACAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR CAA 90 bp CAGACCTATTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTTGGAGAACTTACTGGTGGGACTaGGAACTTTCTAGAACTTGT +
Preference number: 5 (lower is better)
Translates to: QTYCLKTKFLVQMIHTWRTYWWD*ELSRTC
Trigger: ACAAGTTCTAGAAAGTTCCAAGTCCCACCAGTAAGT...TCTCCAAGTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAATAGGTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR CAA 90 bp TATTCTACCTTAATTCCTCAGAATTCACATTCCTTGCATTCAGCTCCAAGGAAGATAGGCTCCCTCTGCTaGATTTGCATTCAACTAGTT +
Preference number: 5 (lower is better)
Translates to: YSTLIPQNSHSLHSAPRKIGSLC*ICIQLV
Trigger: AACTAGTTGAATGCAAATCAAGCAGAGGGAGCCTAT...CTTCCTTGGAGCTGAATGCAAGGAATGTGAATTCTGAGGAATTAAGGTAGAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR CAA 90 bp TATCCAGACCTATTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTTGGACAGCCACAGACCTTaGCAATTTTCCCCATTTCAT +
Preference number: 5 (lower is better)
Translates to: YPDLLLKNKVPSADDTHLDSHRP*QFSPFH
Trigger: ATGAAATGGGGAAAATTGCAAAGGTCTGTGGCTGTC...CAAGTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAATAGGTCTGGATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000490467.5
CDS-3UTR CAA 90 bp ATCCAGACCTATTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTTGGTCTCTTAGAGTTATTTaGCCATCAACAGCTGGCTTC +
Preference number: 5 (lower is better)
Translates to: IQTYCLKTKFLVQMIHTWSLRVI*PSTAGF
Trigger: GAAGCCAGCTGTTGATGGCAAAATAACTCTAAGAGA...CCAAGTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAATAGGTCTGGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000490467.5
CDS-3UTR CAA 90 bp CAGACCTATTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTTGGAGATCTCTTAGAGTTATTTaGCCATCAACAGCTGGCTTC +
Preference number: 5 (lower is better)
Translates to: QTYCLKTKFLVQMIHTWRSLRVI*PSTAGF
Trigger: GAAGCCAGCTGTTGATGGCAAAATAACTCTAAGAGA...TCTCCAAGTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAATAGGTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000490467.5
CDS-3UTR CAA 90 bp TATTCTACCTTAATTCCTCAGAATTCACATTCCTTGCATTCAGCTCCAAGGAAGGCAATAATGTATAGCTaGTTCAAAACGCCGGTCTAT +
Preference number: 5 (lower is better)
Translates to: YSTLIPQNSHSLHSAPRKAIMYS*FKTPVY
Trigger: ATAGACCGGCGTTTTGAACAAGCTATACATTATTGC...CTTCCTTGGAGCTGAATGCAAGGAATGTGAATTCTGAGGAATTAAGGTAGAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR CAA 90 bp TTATTACTAGGGCTAAGTCAATTCTGGAGGCCCTTACTACTTTTTCAAGTTCCAGTATTGTTTTTCCCCTaGTTACTGCACCAGAGAATA +
Preference number: 5 (lower is better)
Translates to: LLLGLSQFWRPLLLFQVPVLFFP*LLHQRI
Trigger: TATTCTCTGGTGCAGTAACAAGGGGAAAAACAATAC...TGGAACTTGAAAAAGTAGTAAGGGCCTCCAGAATTGACTTAGCCCTAGTAATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR CAA 90 bp CAGACCTATTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTTGGAGACTGGTAGGATTCCTTTaGTCTTCTTCAGAGATCAAA +
Preference number: 5 (lower is better)
Translates to: QTYCLKTKFLVQMIHTWRLVGFL*SSSEIK
Trigger: TTTGATCTCTGAAGAAGACAAAAGGAATCCTACCAG...TCTCCAAGTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAATAGGTCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000490467.5
CDS-3UTR CAA 90 bp CAGACCTATTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTTGGAGAATCAGATTTAGCAAGTaGTCAATCTTGTCAGGTAGG +
Preference number: 5 (lower is better)
Translates to: QTYCLKTKFLVQMIHTWRIRFSK*SILSGR
Trigger: CCTACCTGACAAGATTGACAACTTGCTAAATCTGAT...TCTCCAAGTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAATAGGTCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334546.6
CDS CCA 90 bp AACCACAAGTCTGTAAGTTGCTGCCATAATATCAAATCCACTTACTaGTGGGACTTGGAACTTTCTAGAACTTGTTTCATGAAAATTCTC +
Preference number: 5 (lower is better)
Translates to: NHKSVSCCHNIKSTY*WDLELSRTCFMKIL
Trigger: GAGAATTTTCATGAAACAAGTTCTAGAAAGTTCCAAGTCCCACCAGTAAGTGGATTTGATATTATGGCAGCAACTTACAGACTTGTGGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR CAA 90 bp CCTCCTAAGTTAAATGTGTATCCAGACCTATTGCTTAAAAACAAAGTTCCTAGTCTTACCAATTTCATTTaGCATTGGGGTGGGGCATTT +
Preference number: 5 (lower is better)
Translates to: PPKLNVYPDLLLKNKVPSLTNFI*HWGGAF
Trigger: AAATGCCCCACCCCAATGCAAAATGAAATTGGTAAG...ACTAGGAACTTTGTTTTTAAGCAATAGGTCTGGATACACATTTAACTTAGGAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR CAA 90 bp ATCCAGACCTATTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTTGGTCCTCTTCCTCTATTTaGTGTCCATTGGTTTCAATA +
Preference number: 5 (lower is better)
Translates to: IQTYCLKTKFLVQMIHTWSSSSI*CPLVSI
Trigger: TATTGAAACCAATGGACACAAAATAGAGGAAGAGGA...CCAAGTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAATAGGTCTGGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR CAA 90 bp TGTATCCAGACCTATTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTGTATTGTTTTTCCCCTaGTTACTGCACCAGAGAATA +
Preference number: 5 (lower is better)
Translates to: CIQTYCLKTKFLVQMIHTVLFFP*LLHQRI
Trigger: TATTCTCTGGTGCAGTAACAAGGGGAAAAACAATAC...AGTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAATAGGTCTGGATACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000490467.5
CDS-3UTR CAA 90 bp TGTATCCAGACCTATTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTCTGGTAGGATTCCTTTaGTCTTCTTCAGAGATCAAA +
Preference number: 5 (lower is better)
Translates to: CIQTYCLKTKFLVQMIHTLVGFL*SSSEIK
Trigger: TTTGATCTCTGAAGAAGACAAAAGGAATCCTACCAG...AGTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAATAGGTCTGGATACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000490467.5
CDS-3UTR CAA 90 bp CCTCCTAAGTTAAATGTGTATCCAGACCTATTGCTTAAAAACAAAGTTCCTAGTGCCTGTTGCTCCTTGTaGGTAGCTTTATGTCAAATT +
Preference number: 5 (lower is better)
Translates to: PPKLNVYPDLLLKNKVPSACCSL*VALCQI
Trigger: AATTTGACATAAAGCTACCAACAAGGAGCAACAGGC...ACTAGGAACTTTGTTTTTAAGCAATAGGTCTGGATACACATTTAACTTAGGAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334546.6
CDS-3UTR CAA 90 bp CCTCCTAAGTTAAATGTGTATCCAGACCTATTGCTTAAAAACAAAGTTCCTAGTGTATTGTTTTTCCCCTaGTTACTGCACCAGAGAATA +
Preference number: 5 (lower is better)
Translates to: PPKLNVYPDLLLKNKVPSVLFFP*LLHQRI
Trigger: TATTCTCTGGTGCAGTAACAAGGGGAAAAACAATAC...ACTAGGAACTTTGTTTTTAAGCAATAGGTCTGGATACACATTTAACTTAGGAGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000490467.5
CDS-3UTR CAA 90 bp TTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTTGGAGAAATCAAAGTTGCAATTCAATAGTTaGAAATCGTCCAGAGTCAGA +
Preference number: 5 (lower is better)
Translates to: LLKNKVPSADDTHLEKSKLQFNS*KSSRVR
Trigger: TCTGACTCTGGACGATTTCAAACTATTGAATTGCAA...CTTTGATTTCTCCAAGTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR CAA 90 bp CCTCCTAAGTTAAATGTGTATCCAGACCTATTGCTTAAAAACAAAGTTCCTAGTTGGATATTAAGTTGCTaGGGGGTTTTACTTACATCA +
Preference number: 5 (lower is better)
Translates to: PPKLNVYPDLLLKNKVPSWILSC*GVLLTS
Trigger: TGATGTAAGTAAAACCCCCAAGCAACTTAATATCCA...ACTAGGAACTTTGTTTTTAAGCAATAGGTCTGGATACACATTTAACTTAGGAGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR CAA 90 bp CTATTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTTGGAGAAATCAAAAGGGAAGCTATTCTaGACACTTTCAGAACTAGTT +
Preference number: 5 (lower is better)
Translates to: LLLKNKVPSADDTHLEKSKGKLF*TLSELV
Trigger: AACTAGTTCTGAAAGTGTCAAGAATAGCTTCCCTTT...TGATTTCTCCAAGTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAATAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS-3UTR CAA 90 bp TTGCTTAAAAACAAAGTTCCTAGTGCAGATGATACACACTTGGAGAAATCAAAGATTCTCCTTTTCTTTTaGCCTACCATAACTCTAACC +
Preference number: 5 (lower is better)
Translates to: LLKNKVPSADDTHLEKSKILLFF*PTITLT
Trigger: GGTTAGAGTTATGGTAGGCAAAAAGAAAAGGAGAAT...CTTTGATTTCTCCAAGTGTGTATCATCTGCACTAGGAACTTTGTTTTTAAGCAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS GCA 72 bp GCTCCTCCTCCGGCGGCTCAGCTCGCGGGCAGCGCTTaGCTCCAAGCCTCCCCGCGGCGCGGACTCTCGGGC +
Preference number: 6 (lower is better)
Translates to: APPPAAQLAGSA*LQASPRRGLSG
Trigger: GCCCGAGAGTCCGCGCCGCGGGGAGGCTTGGAGGCAAGCGCTGCCCGCGAGCTGAGCCGCCGGAGGAGGAGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264977.8
ENST00000490467.5
CDS CAA 72 bp GGCTCCTCCTCCGGCGGCTCAGCTCGCGGGCAGCGCTaGCCTCCAAGCCTCCCCGCGGCGCGGACTCTCGGG +
Preference number: 6 (lower is better)
Translates to: GSSSGGSARGQR*PPSLPAARTLG
Trigger: CCCGAGAGTCCGCGCCGCGGGGAGGCTTGGAGGCAAGCGCTGCCCGCGAGCTGAGCCGCCGGAGGAGGAGCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264977.8
ENST00000490467.5
CDS CAA 90 bp GTTGCCCGCGGCTCCTCCTCCGGCGGCTCAGCTCGCGGGCAGCGCTaGCCTCCAAGCCTCCCCGCGGCGCGGACTCTCGGGCTACGAATG +
Preference number: 6 (lower is better)
Translates to: VARGSSSGGSARGQR*PPSLPAARTLGLRM
Trigger: CATTCGTAGCCCGAGAGTCCGCGCCGCGGGGAGGCTTGGAGGCAAGCGCTGCCCGCGAGCTGAGCCGCCGGAGGAGGAGCCGCGGGCAAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264977.8
ENST00000490467.5
CDS CAA 90 bp GGCTGGAGGTGGGAGTGGTGTTCCAGGTTTCTTTTCTGGTTTATTTaGAATCTCGTTGCCCGCGGCTCCTCCTCCGGCGGCTCAGCTCGC +
Preference number: 6 (lower is better)
Translates to: GWRWEWCSRFLFWFI*NLVARGSSSGGSAR
Trigger: GCGAGCTGAGCCGCCGGAGGAGGAGCCGCGGGCAACGAGATTCAAAATAAACCAGAAAAGAAACCTGGAACACCACTCCCACCTCCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490467.5
CDS TCA 72 bp CGTCTCATACTCCTCAGCGGCAAACCGGTCCCAGTCTaGGGGCTCAGGCCCATCGTTCTCAACATCCTTCTG +
Preference number: 6 (lower is better)
Translates to: RLILLSGKPVPV*GLRPIVLNILL
Trigger: CAGAAGGATGTTGAGAACGATGGGCCTGAGCCCTCAGACTGGGACCGGTTTGCCGCTGAGGAGTATGAGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000469270.1
ENST00000490467.5
CDS CCA 72 bp GAACCGGGGAGAGAGGTCGGGGACTACTTGGAGAGGTaGCTGGAGGTGGGAGTGGTGTTCCAGGTTTCTTTT +
Preference number: 6 (lower is better)
Translates to: EPGREVGDYLER*LEVGVVFQVSF
Trigger: AAAAGAAACCTGGAACACCACTCCCACCTCCAGCCACCTCTCCAAGTAGTCCCCGACCTCTCTCCCCGGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000490467.5
CDS CCA 72 bp GGCTGGAGGTGGGAGTGGTGTTCCAGGTTTCTTTTCTaGTTTATTTTGAATCTCGTTGCCCGCGGCTCCTCC +
Preference number: 6 (lower is better)
Translates to: GWRWEWCSRFLF*FILNLVARGSS
Trigger: GGAGGAGCCGCGGGCAACGAGATTCAAAATAAACCAGAAAAGAAACCTGGAACACCACTCCCACCTCCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490467.5
CDS CAA 72 bp TCCTCTCTTGACCCTGGGTATGCCTGTGAAGGCCTGTaGGGGATAGTCTCCTTCAGCCGAAGAAAGCCCATT +
Preference number: 6 (lower is better)
Translates to: SSLDPGYACEGL*GIVSFSRRKPI
Trigger: AATGGGCTTTCTTCGGCTGAAGGAGACTATCCCCAACAGGCCTTCACAGGCATACCCAGGGTCAAGAGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS TCA 72 bp AGCGGGAGTGGAATTCTGGAGCATCTTTCAGGAACGTaGGACCAGGGTGGGTATCCACCACATCCTGAAGTA +
Preference number: 6 (lower is better)
Translates to: SGSGILEHLSGT*DQGGYPPHPEV
Trigger: TACTTCAGGATGTGGTGGATACCCACCCTGGTCTCACGTTCCTGAAAGATGCTCCAGAATTCCACTCCCGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000447251.2
ENST00000490467.5
CDS TCA 72 bp CTCCCAGCCTCCACAGACCACAATCTATGCTTGTCCTaGCATGCAGCTGGTTCCCAAATACAGTCTGTGGCT +
Preference number: 6 (lower is better)
Translates to: LPASTDHNLCLS*HAAGSQIQSVA
Trigger: AGCCACAGACTGTATTTGGGAACCAGCTGCATGTCAGGACAAGCATAGATTGTGGTCTGTGGAGGCTGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334546.6
CDS GCA 72 bp AAAGCCTTCCTGGAATTGTGCTTGGGCAGATTCCTCTaGAACAAGCGTCTCATACTCCTCAGCGGCAAACCG +
Preference number: 6 (lower is better)
Translates to: KAFLELCLGRFL*NKRLILLSGKP
Trigger: CGGTTTGCCGCTGAGGAGTATGAGACGCTTGTTGCAGAGGAATCTGCCCAAGCACAATTCCAGGAAGGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000490467.5
CDS GCA 72 bp ATTGCCTTCCTGGAATTGTGCTTGGGCAGATTCCTCTaGAACAAGCGTCTCATACTCCTCAGCGGCAAACCG +
Preference number: 6 (lower is better)
Translates to: IAFLELCLGRFL*NKRLILLSGKP
Trigger: CGGTTTGCCGCTGAGGAGTATGAGACGCTTGTTGCAGAGGAATCTGCCCAAGCACAATTCCAGGAAGGCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469270.1
CDS CAA 90 bp AAATGTAGATCCTCTCTTGACCCTGGGTATGCCTGTGAAGGCCTGTaGGGGATAGTCTCCTTCAGCCGAAGAAAGCCCATTTTCATGGGG +
Preference number: 6 (lower is better)
Translates to: KCRSSLDPGYACEGL*GIVSFSRRKPIFMG
Trigger: CCCCATGAAAATGGGCTTTCTTCGGCTGAAGGAGACTATCCCCAACAGGCCTTCACAGGCATACCCAGGGTCAAGAGAGGATCTACATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS CCA 72 bp TTTATGGACAATGGCGCATTCACAACATTATTCACATaGGGAACCGGGGAGAGAGGTCGGGGACTACTTGGA +
Preference number: 6 (lower is better)
Translates to: FMDNGAFTTLFT*GTGERGRGLLG
Trigger: TCCAAGTAGTCCCCGACCTCTCTCCCCGGTTCCCCATGTGAATAATGTTGTGAATGCGCCATTGTCCATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000490467.5
CDS CCA 72 bp CACAGACCACAATCTATGCTTGTCCTGACATGCAGCTaGTTCCCAAATACAGTCTGTGGCTCCCAATACCTG +
Preference number: 6 (lower is better)
Translates to: HRPQSMLVLTCS*FPNTVCGSQYL
Trigger: CAGGTATTGGGAGCCACAGACTGTATTTGGGAACCAGCTGCATGTCAGGACAAGCATAGATTGTGGTCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334546.6
CDS CAA 90 bp TCCATGTGTGAAGGTGTGGCAGGTTCCAGTGCAATAATGTATAGCTaGTTCAAAACGCCGGTCTATCACCACGCTGCTGTAGTGGTTCAC +
Preference number: 6 (lower is better)
Translates to: SMCEGVAGSSAIMYS*FKTPVYHHAAVVVH
Trigger: GTGAACCACTACAGCAGCGTGGTGATAGACCGGCGTTTTGAACAAGCTATACATTATTGCACTGGAACCTGCCACACCTTCACACATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS CAA 72 bp GAAGGTGTGGCAGGTTCCAGTGCAATAATGTATAGCTaGTTCAAAACGCCGGTCTATCACCACGCTGCTGTA +
Preference number: 6 (lower is better)
Translates to: EGVAGSSAIMYS*FKTPVYHHAAV
Trigger: TACAGCAGCGTGGTGATAGACCGGCGTTTTGAACAAGCTATACATTATTGCACTGGAACCTGCCACACCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS CAA 72 bp AGAGGGATGAAATCCTCCTGTTCTAGAGAGCTGCAGTaGGGCTTTGCTAGAAGACAGATGAATTTAGAGGCA +
Preference number: 6 (lower is better)
Translates to: RGMKSSCSRELQ*GFARRQMNLEA
Trigger: TGCCTCTAAATTCATCTGTCTTCTAGCAAAGCCCAACTGCAGCTCTCTAGAACAGGAGGATTTCATCCCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000447251.2
ENST00000490467.5
CDS CAA 72 bp TATAAACACAGCCTGCAGTGGGCCTGTTGCTCCTTGTaGGTAGCTTTATGTCAAATTGACCTGCACATGTTG +
Preference number: 6 (lower is better)
Translates to: YKHSLQWACCSL*VALCQIDLHML
Trigger: CAACATGTGCAGGTCAATTTGACATAAAGCTACCAACAAGGAGCAACAGGCCCACTGCAGGCTGTGTTTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334546.6
CDS CAA 72 bp AGTTATAAACACAGCCTGCAGTGGGCCTGTTGCTCCTaGTTGGTAGCTTTATGTCAAATTGACCTGCACATG +
Preference number: 6 (lower is better)
Translates to: SYKHSLQWACCS*LVALCQIDLHM
Trigger: CATGTGCAGGTCAATTTGACATAAAGCTACCAACAAGGAGCAACAGGCCCACTGCAGGCTGTGTTTATAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334546.6
CDS CAA 90 bp CTTTCCAGGATTCGCAGTAAGAGGGCTCGATCCTCTTCCTCTATTTaGTGTCCATTGGTTTCAATAATCCTTGTTAGACAGGAAGGTGAG +
Preference number: 6 (lower is better)
Translates to: LSRIRSKRARSSSSI*CPLVSIILVRQEGE
Trigger: CTCACCTTCCTGTCTAACAAGGATTATTGAAACCAATGGACACAAAATAGAGGAAGAGGATCGAGCCCTCTTACTGCGAATCCTGGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS TCA 72 bp AGGCTCCCTCTGCTTGATTTGCATTCAACTAGTTCTTaGGCAAAGTCTTCAATGCTTTCCAGGATTCGCAGT +
Preference number: 6 (lower is better)
Translates to: RLPLLDLHSTSS*AKSSMLSRIRS
Trigger: ACTGCGAATCCTGGAAAGCATTGAAGACTTTGCTCAAGAACTAGTTGAATGCAAATCAAGCAGAGGGAGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS TCA 72 bp TTTCATTGTAGACACCGGCAGCTATTCTTCATCCACTaGTTGAAGCTTTCCACATTTCTCTGGAAGGCTTGC +
Preference number: 6 (lower is better)
Translates to: FHCRHRQLFFIH*LKLSTFLWKAC
Trigger: GCAAGCCTTCCAGAGAAATGTGGAAAGCTTCAATCAGTGGATGAAGAATAGCTGCCGGTGTCTACAATGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000490467.5
CDS GCA 72 bp ATCTTTGAACTGAGACACAGGGATGTGCAAGAGGTCTaGACAAACACTATGGTGTACCACAATGCAGTCAAT +
Preference number: 6 (lower is better)
Translates to: IFELRHRDVQEV*TNTMVYHNAVN
Trigger: ATTGACTGCATTGTGGTACACCATAGTGTTTGTGCAGACCTCTTGCACATCCCTGTGTCTCAGTTCAAAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS CCA 72 bp GGAGTCCTTCAGGAAAGTAGAACCGTGGAATGTTTATaGACAATGGCGCATTCACAACATTATTCACATGGG +
Preference number: 6 (lower is better)
Translates to: GVLQESRTVECL*TMAHSQHYSHG
Trigger: CCCATGTGAATAATGTTGTGAATGCGCCATTGTCCATAAACATTCCACGGTTCTACTTTCCTGAAGGACTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000490467.5
CDS TCA 72 bp CATGATGGTTATTCAGCAACTTTCTCCACATGGCAATaGATGACTGTGCTGTCACAAATCCTGTCTTCTCTC +
Preference number: 6 (lower is better)
Translates to: HDGYSATFSTWQ*MTVLSQILSSL
Trigger: GAGAGAAGACAGGATTTGTGACAGCACAGTCATTCATTGCCATGTGGAGAAAGTTGCTGAATAACCATCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000447251.2
ENST00000490467.5
CDS GCA 72 bp GTGGTTCACAGTACTAACCACAAGTCTGTAAGTTGCTaGCATAATATCAAATCCACTTACTGGTGGGACTTG +
Preference number: 6 (lower is better)
Translates to: VVHSTNHKSVSC*HNIKSTYWWDL
Trigger: CAAGTCCCACCAGTAAGTGGATTTGATATTATGGCAGCAACTTACAGACTTGTGGTTAGTACTGTGAACCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS GCA 72 bp GTAGTGGTTCACAGTACTAACCACAAGTCTGTAAGTTaGTGCCATAATATCAAATCCACTTACTGGTGGGAC +
Preference number: 6 (lower is better)
Translates to: VVVHSTNHKSVS*CHNIKSTYWWD
Trigger: GTCCCACCAGTAAGTGGATTTGATATTATGGCAGCAACTTACAGACTTGTGGTTAGTACTGTGAACCACTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS CCA 72 bp TGTCCTGACATGCAGCTGGTTCCCAAATACAGTCTGTaGCTCCCAATACCTGCTCATAATTTTCAAGTTATA +
Preference number: 6 (lower is better)
Translates to: CPDMQLVPKYSL*LPIPAHNFQVI
Trigger: TATAACTTGAAAATTATGAGCAGGTATTGGGAGCCACAGACTGTATTTGGGAACCAGCTGCATGTCAGGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334546.6
CDS CAA 90 bp CACCAACAGGACTTCTACAGACTGATAAATTGGCCTGGGAGGAAGTaGTCAAGGTTTCCTGTAGAATTTGCATCATTTCCTTTTCTTGTG +
Preference number: 6 (lower is better)
Translates to: HQQDFYRLINWPGRK*SRFPVEFASFPFLV
Trigger: CACAAGAAAAGGAAATGATGCAAATTCTACAGGAAACCTTGACAACTTCCTCCCAGGCCAATTTATCAGTCTGTAGAAGTCCTGTTGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS CAA 90 bp TTTTCAAGTTATAAACACAGCCTGCAGTGGGCCTGTTGCTCCTTGTaGGTAGCTTTATGTCAAATTGACCTGCACATGTTGAGAATATGG +
Preference number: 6 (lower is better)
Translates to: FSSYKHSLQWACCSL*VALCQIDLHMLRIW
Trigger: CCATATTCTCAACATGTGCAGGTCAATTTGACATAAAGCTACCAACAAGGAGCAACAGGCCCACTGCAGGCTGTGTTTATAACTTGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334546.6
CDS TCA 72 bp CAATTCAATAGTTTGAAATCGTCCAGAGTCAGAAGCTaGGAGCTGGACAACATCTTCATATTTAGGGGGTTG +
Preference number: 6 (lower is better)
Translates to: QFNSLKSSRVRS*ELDNIFIFRGL
Trigger: CAACCCCCTAAATATGAAGATGTTGTCCAGCTCTCAGCTTCTGACTCTGGACGATTTCAAACTATTGAATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS CAA 72 bp ATTCGCAGTAAGAGGGCTCGATCCTCTTCCTCTATTTaGTGTCCATTGGTTTCAATAATCCTTGTTAGACAG +
Preference number: 6 (lower is better)
Translates to: IRSKRARSSSSI*CPLVSIILVRQ
Trigger: CTGTCTAACAAGGATTATTGAAACCAATGGACACAAAATAGAGGAAGAGGATCGAGCCCTCTTACTGCGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS CAA 72 bp GACTTCTACAGACTGATAAATTGGCCTGGGAGGAAGTaGTCAAGGTTTCCTGTAGAATTTGCATCATTTCCT +
Preference number: 6 (lower is better)
Translates to: DFYRLINWPGRK*SRFPVEFASFP
Trigger: AGGAAATGATGCAAATTCTACAGGAAACCTTGACAACTTCCTCCCAGGCCAATTTATCAGTCTGTAGAAGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS CAA 90 bp ATTCGCAGTAAGAGGGCTCGATCCTCTTCCTCTATTTTGTGTCCATaGGTTTCAATAATCCTTGTTAGACAGGAAGGTGAGACTTTTTCT +
Preference number: 6 (lower is better)
Translates to: IRSKRARSSSSILCP*VSIILVRQEGETFS
Trigger: AGAAAAAGTCTCACCTTCCTGTCTAACAAGGATTATTGAAACCAATGGACACAAAATAGAGGAAGAGGATCGAGCCCTCTTACTGCGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS CAA 90 bp CTTCCAAATATAATGGCTTTTCCCATGAAGGGAAACCATTTATATTaGAGGTTTGGTCACTATCAGGATACAGTAGCTGCTGCACATGTG +
Preference number: 6 (lower is better)
Translates to: LPNIMAFPMKGNHLY*RFGHYQDTVAAAHV
Trigger: CACATGTGCAGCAGCTACTGTATCCTGATAGTGACCAAACCTCAAATATAAATGGTTTCCCTTCATGGGAAAAGCCATTATATTTGGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS CAA 72 bp GCATCATTTCCTTTTCTTGTGATAGGCTCCCTCTGCTaGATTTGCATTCAACTAGTTCTTGAGCAAAGTCTT +
Preference number: 6 (lower is better)
Translates to: ASFPFLVIGSLC*ICIQLVLEQSL
Trigger: AAGACTTTGCTCAAGAACTAGTTGAATGCAAATCAAGCAGAGGGAGCCTATCACAAGAAAAGGAAATGATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS TCA 72 bp TTTGCTAGAAGACAGATGAATTTAGAGGCATCATCATaGTGGTTATTCAGCAACTTTCTCCACATGGCAATG +
Preference number: 6 (lower is better)
Translates to: FARRQMNLEASS*WLFSNFLHMAM
Trigger: CATTGCCATGTGGAGAAAGTTGCTGAATAACCATCATGATGATGCCTCTAAATTCATCTGTCTTCTAGCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264977.8
ENST00000334546.6
ENST00000447251.2
ENST00000490467.5
CDS TCA 72 bp TTTGATTGTTCAGTGATCTCGGTTTCCAGTGAAAGATaGGACTCATTAAAGGAAATGGACATGAGAAGACTC +
Preference number: 6 (lower is better)
Translates to: FDCSVISVSSER*DSLKEMDMRRL
Trigger: GAGTCTTCTCATGTCCATTTCCTTTAATGAGTCTCATCTTTCACTGGAAACCGAGATCACTGAACAATCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469270.1
CDS GCA 72 bp TTTGCATCATTTCCTTTTCTTGTGATAGGCTCCCTCTaGTTGATTTGCATTCAACTAGTTCTTGAGCAAAGT +
Preference number: 6 (lower is better)
Translates to: FASFPFLVIGSL*LICIQLVLEQS
Trigger: ACTTTGCTCAAGAACTAGTTGAATGCAAATCAAGCAGAGGGAGCCTATCACAAGAAAAGGAAATGATGCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS CCA 72 bp TCTGTAAGTTGCTGCCATAATATCAAATCCACTTACTaGTGGGACTTGGAACTTTCTAGAACTTGTTTCATG +
Preference number: 6 (lower is better)
Translates to: SVSCCHNIKSTY*WDLELSRTCFM
Trigger: CATGAAACAAGTTCTAGAAAGTTCCAAGTCCCACCAGTAAGTGGATTTGATATTATGGCAGCAACTTACAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS CCA 72 bp TCTAAAGGATTCATGGTTAATGACTGTGATTGGACCTaGACAGCTTTTAGAGTTCTAGGATCATTTACCTCT +
Preference number: 6 (lower is better)
Translates to: SKGFMVNDCDWT*TAFRVLGSFTS
Trigger: AGAGGTAAATGATCCTAGAACTCTAAAAGCTGTCCAGGTCCAATCACAGTCATTAACCATGAATCCTTTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS CAA 90 bp GTAGAATTTGCATCATTTCCTTTTCTTGTGATAGGCTCCCTCTGCTaGATTTGCATTCAACTAGTTCTTGAGCAAAGTCTTCAATGCTTT +
Preference number: 6 (lower is better)
Translates to: VEFASFPFLVIGSLC*ICIQLVLEQSLQCF
Trigger: AAAGCATTGAAGACTTTGCTCAAGAACTAGTTGAATGCAAATCAAGCAGAGGGAGCCTATCACAAGAAAAGGAAATGATGCAAATTCTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS CCA 72 bp GATTCCAAATCCATTAACAATTTATCTATCTCTTCCTaGCTACTGGAATTTGTAAAATCTCTCTGGTCTCCC +
Preference number: 6 (lower is better)
Translates to: DSKSINNLSISS*LLEFVKSLWSP
Trigger: GGGAGACCAGAGAGATTTTACAAATTCCAGTAGCCAGGAAGAGATAGATAAATTGTTAATGGATTTGGAATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS CAA 72 bp TGCTGCCATAATATCAAATCCACTTACTGGTGGGACTaGGAACTTTCTAGAACTTGTTTCATGAAAATTCTC +
Preference number: 6 (lower is better)
Translates to: CCHNIKSTYWWD*ELSRTCFMKIL
Trigger: GAGAATTTTCATGAAACAAGTTCTAGAAAGTTCCAAGTCCCACCAGTAAGTGGATTTGATATTATGGCAGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264977.8
CDS CAA 90 bp TCTGTAAGTTGCTGCCATAATATCAAATCCACTTACTGGTGGGACTaGGAACTTTCTAGAACTTGTTTCATGAAAATTCTCCTAAATGAC +
Preference number: 6 (lower is better)
Translates to: SVSCCHNIKSTYWWD*ELSRTCFMKILLND
Trigger: GTCATTTAGGAGAATTTTCATGAAACAAGTTCTAGAAAGTTCCAAGTCCCACCAGTAAGTGGATTTGATATTATGGCAGCAACTTACAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264977.8