Pregenerated sensors for PPP1R35 (Homo sapiens)
Ensembl gene IDs: ENSG00000160813Ensembl transcript IDs: ENST00000292330.3, ENST00000470295.5, ENST00000476185.1, ENST00000487452.1, ENST00000491407.1
Found 47 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | CTAACAAATAGTTTAACACAAAAATACGAACTAGCCCTCCAGGGATCTTTGGGGGGGACACAGCCTGGCTaGCGCCTCCTTTCCCCCGCC | + |
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Preference number: 4 (lower is better) Translates to: LTNSLTQKYELALQGSLGGTQPG*RLLSPA Trigger: GGCGGGGGAAAGGAGGCGGCAGCCAGGCTGTGTCCC...CCCCAAAGATCCCTGGAGGGCTAGTTCGTATTTTTGTGTTAAACTATTTGTTAG 53% GC, longest homopolymer 7 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000292330.3 |
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| CDS-3UTR GCA 90 bp | CTAACAAATAGTTTAACACAAAAATACGAACTAGCCCTCCAGGGATCTTTGGGGAAAGTGGCTCCCGGCTaGGGCCCGCAGCTCCAGGCC | + |
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Preference number: 4 (lower is better) Translates to: LTNSLTQKYELALQGSLGKVAPG*GPQLQA Trigger: GGCCTGGAGCTGCGGGCCGCAGCCGGGAGCCACTTT...CCCCAAAGATCCCTGGAGGGCTAGTTCGTATTTTTGTGTTAAACTATTTGTTAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000292330.3 |
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| CDS-3UTR GCA 90 bp | CTAACAAATAGTTTAACACAAAAATACGAACTAGCCCTCCAGGGATCTTTGGGGTGTTCCTCCGGCACCTaGAGGCTCACCAGGTCCCGG | + |
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Preference number: 4 (lower is better) Translates to: LTNSLTQKYELALQGSLGCSSGT*RLTRSR Trigger: CCGGGACCTGGTGAGCCTGCAGGTGCCGGAGGAACA...CCCCAAAGATCCCTGGAGGGCTAGTTCGTATTTTTGTGTTAAACTATTTGTTAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000292330.3 |
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| CDS-3UTR TCA 90 bp | ATTCTAACAAATAGTTTAACACAAAAATACGAACTAGCCCTCCAGGGATCTTTGGGGCGGGGCCGGAGTTaGAGTCGGAGAGGGGGCAGA | + |
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Preference number: 4 (lower is better) Translates to: ILTNSLTQKYELALQGSLGRGRS*SRRGGR Trigger: TCTGCCCCCTCTCCGACTTCAACTCCGGCCCCGCCC...CAAAGATCCCTGGAGGGCTAGTTCGTATTTTTGTGTTAAACTATTTGTTAGAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000292330.3 |
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| CDS-3UTR GCA 90 bp | CTAACAAATAGTTTAACACAAAAATACGAACTAGCCCTCCAGGGATCTTTGGGGGGCCCAAGGCCAGGCTaGTCTTCAGCACGGGCATCT | + |
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Preference number: 4 (lower is better) Translates to: LTNSLTQKYELALQGSLGGPRPG*SSARAS Trigger: AGATGCCCGTGCTGAAGAGCAGCCTGGCCTTGGGCC...CCCCAAAGATCCCTGGAGGGCTAGTTCGTATTTTTGTGTTAAACTATTTGTTAG 50% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENST00000292330.3 |
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| CDS-3UTR CCA 90 bp | ATTCTAACAAATAGTTTAACACAAAAATACGAACTAGCCCTCCAGGGATCTTTGCCCGGAAGAGCCGCTTaGAGCGCGGCACGTTCAGCC | + |
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Preference number: 4 (lower is better) Translates to: ILTNSLTQKYELALQGSLPGRAA*SAARSA Trigger: GGCTGAACGTGCCGCGCTCCAAGCGGCTCTTCCGGG...CAAAGATCCCTGGAGGGCTAGTTCGTATTTTTGTGTTAAACTATTTGTTAGAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000292330.3 |
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| CDS-3UTR CCA 90 bp | ATTCTAACAAATAGTTTAACACAAAAATACGAACTAGCCCTCCAGGGATCTTTGCCCAGGTGGCTCCTTTaGGTGCGGGGCTCGAGCCTG | + |
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Preference number: 4 (lower is better) Translates to: ILTNSLTQKYELALQGSLPRWLL*VRGSSL Trigger: CAGGCTCGAGCCCCGCACCCAAAGGAGCCACCTGGG...CAAAGATCCCTGGAGGGCTAGTTCGTATTTTTGTGTTAAACTATTTGTTAGAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000292330.3 |
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| CDS-3UTR CCA 90 bp | CTAACAAATAGTTTAACACAAAAATACGAACTAGCCCTCCAGGGATCTTTGGGGCAAGATGGTCATGTCTaGCCCAGGCCCAGGTGGCTC | + |
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Preference number: 4 (lower is better) Translates to: LTNSLTQKYELALQGSLGQDGHV*PRPRWL Trigger: GAGCCACCTGGGCCTGGGCCAGACATGACCATCTTG...CCCCAAAGATCCCTGGAGGGCTAGTTCGTATTTTTGTGTTAAACTATTTGTTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000292330.3 |
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| CDS-3UTR TCA 90 bp | ATTCTAACAAATAGTTTAACACAAAAATACGAACTAGCCCTCCAGGGATCTTTGTCTTTGGAGGTGCCTTaGGGGTGCGGGGATGCGGGG | + |
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Preference number: 4 (lower is better) Translates to: ILTNSLTQKYELALQGSLSLEVP*GCGDAG Trigger: CCCCGCATCCCCGCACCCTCAAGGCACCTCCAAAGA...CAAAGATCCCTGGAGGGCTAGTTCGTATTTTTGTGTTAAACTATTTGTTAGAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000292330.3 |
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| CDS-3UTR TCA 90 bp | CTAACAAATAGTTTAACACAAAAATACGAACTAGCCCTCCAGGGATCTTTGGGGCGCCGACTTCAGCTCTaGCTCCCCACAACCCATCAT | + |
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Preference number: 4 (lower is better) Translates to: LTNSLTQKYELALQGSLGRRLQL*LPTTHH Trigger: ATGATGGGTTGTGGGGAGTCAGAGCTGAAGTCGGCG...CCCCAAAGATCCCTGGAGGGCTAGTTCGTATTTTTGTGTTAAACTATTTGTTAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000292330.3 |
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| CDS-3UTR TCA 90 bp | ATTCTAACAAATAGTTTAACACAAAAATACGAACTAGCCCTCCAGGGATCTTTGGAGGAAGGTGTCCTCTaGAGGGCGGGGCCGGAGTTG | + |
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Preference number: 4 (lower is better) Translates to: ILTNSLTQKYELALQGSLEEGVL*RAGPEL Trigger: CAACTCCGGCCCCGCCCTTCAGAGGACACCTTCCTC...CAAAGATCCCTGGAGGGCTAGTTCGTATTTTTGTGTTAAACTATTTGTTAGAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000292330.3 |
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| CDS-3UTR GCA 90 bp | CTAACAAATAGTTTAACACAAAAATACGAACTAGCCCTCCAGGGATCTTTGGGGCGCCTCAGTGTCCGGTaGATGAGGAAGGTGTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: LTNSLTQKYELALQGSLGRLSVR*MRKVSS Trigger: AGAGGACACCTTCCTCATGCACCGGACACTGAGGCG...CCCCAAAGATCCCTGGAGGGCTAGTTCGTATTTTTGTGTTAAACTATTTGTTAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000292330.3 |
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| CDS-3UTR CCA 90 bp | CTAACAAATAGTTTAACACAAAAATACGAACTAGCCCTCCAGGGATCTTTGGGGCTGGGTCACACAAGATaGTCATGTCTGGCCCAGGCC | + |
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Preference number: 4 (lower is better) Translates to: LTNSLTQKYELALQGSLGLGHTR*SCLAQA Trigger: GGCCTGGGCCAGACATGACCATCTTGTGTGACCCAG...CCCCAAAGATCCCTGGAGGGCTAGTTCGTATTTTTGTGTTAAACTATTTGTTAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000292330.3 |
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| CDS-3UTR CCA 90 bp | CTAACAAATAGTTTAACACAAAAATACGAACTAGCCCTCCAGGGATCTTTGGGGCCCTCCAGGGATCTTTaGGGTCTACGCTTCCCATCG | + |
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Preference number: 4 (lower is better) Translates to: LTNSLTQKYELALQGSLGPSRDL*GLRFPS Trigger: CGATGGGAAGCGTAGACCCCAAAGATCCCTGGAGGG...CCCCAAAGATCCCTGGAGGGCTAGTTCGTATTTTTGTGTTAAACTATTTGTTAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000292330.3 |
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| CDS-3UTR CCA 90 bp | CTAACAAATAGTTTAACACAAAAATACGAACTAGCCCTCCAGGGATCTTTGGGGAGGCCGCAGCGGATCTaGAACGACTTTCTCAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LTNSLTQKYELALQGSLGRPQRI*NDFLSC Trigger: ACAGCTGAGAAAGTCGTTCCAGATCCGCTGCGGCCT...CCCCAAAGATCCCTGGAGGGCTAGTTCGTATTTTTGTGTTAAACTATTTGTTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000292330.3 |
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| CDS-3UTR TCA 90 bp | ATTCTAACAAATAGTTTAACACAAAAATACGAACTAGCCCTCCAGGGATCTTTGGAGCCAATTTCTCCCTaGGCGCGGCATTCAGAACCT | + |
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Preference number: 4 (lower is better) Translates to: ILTNSLTQKYELALQGSLEPISP*ARHSEP Trigger: AGGTTCTGAATGCCGCGCTCAGGGAGAAATTGGCTC...CAAAGATCCCTGGAGGGCTAGTTCGTATTTTTGTGTTAAACTATTTGTTAGAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000292330.3 |
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| CDS-3UTR TCA 90 bp | ATTCTAACAAATAGTTTAACACAAAAATACGAACTAGCCCTCCAGGGATCTTTGTCAGTGTCCGGTGCATaGGGAAGGTGTCCTCTGAAG | + |
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Preference number: 4 (lower is better) Translates to: ILTNSLTQKYELALQGSLSVSGA*GRCPLK Trigger: CTTCAGAGGACACCTTCCTCATGCACCGGACACTGA...CAAAGATCCCTGGAGGGCTAGTTCGTATTTTTGTGTTAAACTATTTGTTAGAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000292330.3 |
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| CDS-3UTR GCA 90 bp | ATTCTAACAAATAGTTTAACACAAAAATACGAACTAGCCCTCCAGGGATCTTTGCATCATCTTTGGAGGTaGCTTGAGGGTGCGGGGATG | + |
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Preference number: 4 (lower is better) Translates to: ILTNSLTQKYELALQGSLHHLWR*LEGAGM Trigger: CATCCCCGCACCCTCAAGGCACCTCCAAAGATGATG...CAAAGATCCCTGGAGGGCTAGTTCGTATTTTTGTGTTAAACTATTTGTTAGAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000292330.3 |
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| CDS GCA 90 bp | AGGCCCAAGGCCAGGCTGCTCTTCAGCACGGGCATCTCCAGCTCCTaGGGCACCGCAGGCTGCGGCTCGGACCGCACCGGGGAGGGCGGC | + |
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Preference number: 5 (lower is better) Translates to: RPKARLLFSTGISSS*GTAGCGSDRTGEGG Trigger: GCCGCCCTCCCCGGTGCGGTCCGAGCCGCAGCCTGCGGTGCCGCAGGAGCTGGAGATGCCCGTGCTGAAGAGCAGCCTGGCCTTGGGCCT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000292330.3 ENST00000470295.5 ENST00000476185.1 ENST00000487452.1 ENST00000491407.1 |
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| CDS TCA 90 bp | CACCAGGTCCCGGAAGAGCCGCTTGGAGCGCGGCACGTTCAGCCCTaGGAGCGCAGCGGGGACGGAGGTGAGTGGCGCGCCTCACCCCGA | + |
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Preference number: 5 (lower is better) Translates to: HQVPEEPLGARHVQP*ERSGDGGEWRASPR Trigger: TCGGGGTGAGGCGCGCCACTCACCTCCGTCCCCGCTGCGCTCTCAGGGCTGAACGTGCCGCGCTCCAAGCGGCTCTTCCGGGACCTGGTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000470295.5 ENST00000491407.1 |
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| CDS GCA 90 bp | AGTGGCTCCCGGCTGCGGCCCGCAGCTCCAGGCCCAAGGCCAGGCTaGTCTTCAGCACGGGCATCTCCAGCTCCTGCGGCACCGCAGGCT | + |
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Preference number: 5 (lower is better) Translates to: SGSRLRPAAPGPRPG*SSARASPAPAAPQA Trigger: AGCCTGCGGTGCCGCAGGAGCTGGAGATGCCCGTGCTGAAGAGCAGCCTGGCCTTGGGCCTGGAGCTGCGGGCCGCAGCCGGGAGCCACT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000292330.3 ENST00000470295.5 ENST00000476185.1 ENST00000487452.1 ENST00000491407.1 |
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| CDS CCA 90 bp | GTTCCTCCGGCACCTGCAGGCTCACCAGGTCCCGGAAGAGCCGCTTaGAGCGCGGCACGTTCAGCCCTGAGAGCGCAGCGGGGACGGAGG | + |
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Preference number: 5 (lower is better) Translates to: VPPAPAGSPGPGRAA*SAARSALRAQRGRR Trigger: CCTCCGTCCCCGCTGCGCTCTCAGGGCTGAACGTGCCGCGCTCCAAGCGGCTCTTCCGGGACCTGGTGAGCCTGCAGGTGCCGGAGGAAC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000470295.5 ENST00000491407.1 |
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| CDS TCA 90 bp | CGCTTCCCATCGCCTCAGTGTCCGGTGCATGAGGAAGGTGTCCTCTaGAGGGCGGGGCCGGAGTTGAAGTCGGAGAGGGGGCAGACCGTC | + |
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Preference number: 5 (lower is better) Translates to: RFPSPQCPVHEEGVL*RAGPELKSERGQTV Trigger: GACGGTCTGCCCCCTCTCCGACTTCAACTCCGGCCCCGCCCTTCAGAGGACACCTTCCTCATGCACCGGACACTGAGGCGATGGGAAGCG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000292330.3 ENST00000470295.5 ENST00000476185.1 ENST00000487452.1 ENST00000491407.1 |
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| CDS GCA 90 bp | AATTTCTCCCTGAGCGCGGCATTCAGAACCTGTTCCTCCGGCACCTaGAGGCTCACCAGGTCCCGGAAGAGCCGCTTGGAGCGCGGCACG | + |
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Preference number: 5 (lower is better) Translates to: NFSLSAAFRTCSSGT*RLTRSRKSRLERGT Trigger: CGTGCCGCGCTCCAAGCGGCTCTTCCGGGACCTGGTGAGCCTGCAGGTGCCGGAGGAACAGGTTCTGAATGCCGCGCTCAGGGAGAAATT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000292330.3 ENST00000470295.5 ENST00000487452.1 ENST00000491407.1 |
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| CDS CCA 90 bp | CAGGTGGCTCCCTCGGACACGCTCTCCTCCAGGCCGCAGCGGATCTaGAACGACTTTCTCAGCTGTTCCTCCACGGCCTTCGCAGCATCA | + |
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Preference number: 5 (lower is better) Translates to: QVAPSDTLSSRPQRI*NDFLSCSSTAFAAS Trigger: TGATGCTGCGAAGGCCGTGGAGGAACAGCTGAGAAAGTCGTTCCAGATCCGCTGCGGCCTGGAGGAGAGCGTGTCCGAGGGAGCCACCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000476185.1 |
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| CDS CCA 90 bp | ACGTTCAGCCCCTCGGACACGCTCTCCTCCAGGCCGCAGCGGATCTaGAACGACTTTCTCAGCTGTTCCTCCACGGCCTTCGCAGCATCA | + |
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Preference number: 5 (lower is better) Translates to: TFSPSDTLSSRPQRI*NDFLSCSSTAFAAS Trigger: TGATGCTGCGAAGGCCGTGGAGGAACAGCTGAGAAAGTCGTTCCAGATCCGCTGCGGCCTGGAGGAGAGCGTGTCCGAGGGGCTGAACGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000292330.3 ENST00000487452.1 |
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| CDS TCA 90 bp | GGATCTTTGGGGTCTACGCTTCCCATCGCCTCAGTGTCCGGTGCATaGGGAAGGTGTCCTCTGAAGGGCGGGGCCGGAGTTGAAGTCGGA | + |
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Preference number: 5 (lower is better) Translates to: GSLGSTLPIASVSGA*GRCPLKGGAGVEVG Trigger: TCCGACTTCAACTCCGGCCCCGCCCTTCAGAGGACACCTTCCTCATGCACCGGACACTGAGGCGATGGGAAGCGTAGACCCCAAAGATCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000292330.3 ENST00000470295.5 ENST00000476185.1 ENST00000487452.1 |
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| CDS CCA 90 bp | TCAGGTGTGGAGATTCATAAAATAGCGTTTCTGGGTCACACAAGATaGTCATGTCTGGCCCAGGCCCAGGTGGCTCCTTTGGGTGCGGGG | + |
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Preference number: 5 (lower is better) Translates to: SGVEIHKIAFLGHTR*SCLAQAQVAPLGAG Trigger: CCCCGCACCCAAAGGAGCCACCTGGGCCTGGGCCAGACATGACCATCTTGTGTGACCCAGAAACGCTATTTTATGAATCTCCACACCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000292330.3 ENST00000470295.5 ENST00000487452.1 ENST00000491407.1 |
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| CDS-3UTR CAA 90 bp | CTAACAAATAGTTTAACACAAAAATACGAACTAGCCCTCCAGGGATCTTTGGGGGCCCAGGTGGCTCCTTaGGGTGCGGGGCTCGAGCCT | + |
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Preference number: 5 (lower is better) Translates to: LTNSLTQKYELALQGSLGAQVAP*GAGLEP Trigger: AGGCTCGAGCCCCGCACCCAAAGGAGCCACCTGGGC...CCCCAAAGATCCCTGGAGGGCTAGTTCGTATTTTTGTGTTAAACTATTTGTTAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000292330.3 |
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| CDS-3UTR CAA 90 bp | CTAACAAATAGTTTAACACAAAAATACGAACTAGCCCTCCAGGGATCTTTGGGGAGGGCGGGGCCGGAGTaGAAGTCGGAGAGGGGGCAG | + |
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Preference number: 5 (lower is better) Translates to: LTNSLTQKYELALQGSLGRAGPE*KSERGQ Trigger: CTGCCCCCTCTCCGACTTCAACTCCGGCCCCGCCCT...CCCCAAAGATCCCTGGAGGGCTAGTTCGTATTTTTGTGTTAAACTATTTGTTAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000292330.3 |
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| CDS-3UTR CAA 90 bp | ATTCTAACAAATAGTTTAACACAAAAATACGAACTAGCCCTCCAGGGATCTTTGTCCCGGAAGAGCCGCTaGGAGCGCGGCACGTTCAGC | + |
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Preference number: 5 (lower is better) Translates to: ILTNSLTQKYELALQGSLSRKSR*ERGTFS Trigger: GCTGAACGTGCCGCGCTCCAAGCGGCTCTTCCGGGA...CAAAGATCCCTGGAGGGCTAGTTCGTATTTTTGTGTTAAACTATTTGTTAGAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000292330.3 |
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| CDS-3UTR CAA 90 bp | CTAACAAATAGTTTAACACAAAAATACGAACTAGCCCTCCAGGGATCTTTGGGGGCCCTCCAGGGATCTTaGGGGTCTACGCTTCCCATC | + |
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Preference number: 5 (lower is better) Translates to: LTNSLTQKYELALQGSLGALQGS*GSTLPI Trigger: GATGGGAAGCGTAGACCCCAAAGATCCCTGGAGGGC...CCCCAAAGATCCCTGGAGGGCTAGTTCGTATTTTTGTGTTAAACTATTTGTTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000292330.3 |
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| CDS-3UTR CAA 90 bp | ATTCTAACAAATAGTTTAACACAAAAATACGAACTAGCCCTCCAGGGATCTTTGATCTTTGGAGGTGCCTaGAGGGTGCGGGGATGCGGG | + |
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Preference number: 5 (lower is better) Translates to: ILTNSLTQKYELALQGSLIFGGA*RVRGCG Trigger: CCCGCATCCCCGCACCCTCAAGGCACCTCCAAAGAT...CAAAGATCCCTGGAGGGCTAGTTCGTATTTTTGTGTTAAACTATTTGTTAGAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000292330.3 |
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| CDS CCA 72 bp | CGGGCTCAGGCTCAAGTCCAGGCCGGGCTCGGGCACTaGGGCTCGGAGTTGCGGGACTTGGGGCTCCGGGGG | + |
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Preference number: 6 (lower is better) Translates to: RAQAQVQAGLGH*GSELRDLGLRG Trigger: CCCCCGGAGCCCCAAGTCCCGCAACTCCGAGCCCCAGTGCCCGAGCCCGGCCTGGACTTGAGCCTGAGCCCG 75% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000292330.3 ENST00000487452.1 ENST00000491407.1 |
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| CDS TCA 72 bp | CCGGAAGAGCCGCTTGGAGCGCGGCACGTTCAGCCCTaGGAGCGCAGCGGGGACGGAGGTGAGTGGCGCGCC | + |
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Preference number: 6 (lower is better) Translates to: PEEPLGARHVQP*ERSGDGGEWRA Trigger: GGCGCGCCACTCACCTCCGTCCCCGCTGCGCTCTCAGGGCTGAACGTGCCGCGCTCCAAGCGGCTCTTCCGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000470295.5 ENST00000491407.1 |
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| CDS GCA 72 bp | GCCAGGCTGCTCTTCAGCACGGGCATCTCCAGCTCCTaGGGCACCGCAGGCTGCGGCTCGGACCGCACCGGG | + |
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Preference number: 6 (lower is better) Translates to: ARLLFSTGISSS*GTAGCGSDRTG Trigger: CCCGGTGCGGTCCGAGCCGCAGCCTGCGGTGCCGCAGGAGCTGGAGATGCCCGTGCTGAAGAGCAGCCTGGC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000292330.3 ENST00000470295.5 ENST00000476185.1 ENST00000487452.1 ENST00000491407.1 |
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| CDS CCA 72 bp | GCACCTGCAGGCTCACCAGGTCCCGGAAGAGCCGCTTaGAGCGCGGCACGTTCAGCCCTGAGAGCGCAGCGG | + |
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Preference number: 6 (lower is better) Translates to: APAGSPGPGRAA*SAARSALRAQR Trigger: CCGCTGCGCTCTCAGGGCTGAACGTGCCGCGCTCCAAGCGGCTCTTCCGGGACCTGGTGAGCCTGCAGGTGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000470295.5 ENST00000491407.1 |
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| CDS CAA 90 bp | TGTTCCTCCGGCACCTGCAGGCTCACCAGGTCCCGGAAGAGCCGCTaGGAGCGCGGCACGTTCAGCCCTGAGAGCGCAGCGGGGACGGAG | + |
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Preference number: 6 (lower is better) Translates to: CSSGTCRLTRSRKSR*ERGTFSPESAAGTE Trigger: CTCCGTCCCCGCTGCGCTCTCAGGGCTGAACGTGCCGCGCTCCAAGCGGCTCTTCCGGGACCTGGTGAGCCTGCAGGTGCCGGAGGAACA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000470295.5 ENST00000491407.1 |
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| CDS CAA 90 bp | TGTTCCTCCGGCACCTGCAGGCTCACCAGGTCCCGGAAGAGCCGCTaGGAGCGCGGCACGTTCAGCCCCTCGGACACGCTCTCCTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: CSSGTCRLTRSRKSR*ERGTFSPSDTLSSR Trigger: CCTGGAGGAGAGCGTGTCCGAGGGGCTGAACGTGCCGCGCTCCAAGCGGCTCTTCCGGGACCTGGTGAGCCTGCAGGTGCCGGAGGAACA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000292330.3 ENST00000487452.1 |
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| CDS CCA 72 bp | GCACCTGCAGGCTCACCAGGTCCCGGAAGAGCCGCTTaGAGCGCGGCACGTTCAGCCCCTCGGACACGCTCT | + |
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Preference number: 6 (lower is better) Translates to: APAGSPGPGRAA*SAARSAPRTRS Trigger: AGAGCGTGTCCGAGGGGCTGAACGTGCCGCGCTCCAAGCGGCTCTTCCGGGACCTGGTGAGCCTGCAGGTGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000292330.3 ENST00000487452.1 |
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| CDS TCA 72 bp | TCGCCTCAGTGTCCGGTGCATGAGGAAGGTGTCCTCTaGAGGGCGGGGCCGGAGTTGAAGTCGGAGAGGGGG | + |
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Preference number: 6 (lower is better) Translates to: SPQCPVHEEGVL*RAGPELKSERG Trigger: CCCCCTCTCCGACTTCAACTCCGGCCCCGCCCTTCAGAGGACACCTTCCTCATGCACCGGACACTGAGGCGA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000292330.3 ENST00000470295.5 ENST00000476185.1 ENST00000487452.1 ENST00000491407.1 |
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| CDS GCA 72 bp | CTGAGCGCGGCATTCAGAACCTGTTCCTCCGGCACCTaGAGGCTCACCAGGTCCCGGAAGAGCCGCTTGGAG | + |
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Preference number: 6 (lower is better) Translates to: LSAAFRTCSSGT*RLTRSRKSRLE Trigger: CTCCAAGCGGCTCTTCCGGGACCTGGTGAGCCTGCAGGTGCCGGAGGAACAGGTTCTGAATGCCGCGCTCAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000292330.3 ENST00000470295.5 ENST00000487452.1 ENST00000491407.1 |
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| CDS TCA 72 bp | GGGTCTACGCTTCCCATCGCCTCAGTGTCCGGTGCATaGGGAAGGTGTCCTCTGAAGGGCGGGGCCGGAGTT | + |
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Preference number: 6 (lower is better) Translates to: GSTLPIASVSGA*GRCPLKGGAGV Trigger: AACTCCGGCCCCGCCCTTCAGAGGACACCTTCCTCATGCACCGGACACTGAGGCGATGGGAAGCGTAGACCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000292330.3 ENST00000470295.5 ENST00000476185.1 ENST00000487452.1 |
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| CDS GCA 72 bp | TTTGGGGTCTACGCTTCCCATCGCCTCAGTGTCCGGTaGATGAGGAAGGTGTCCTCTGAAGGGCGGGGCCGG | + |
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Preference number: 6 (lower is better) Translates to: FGVYASHRLSVR*MRKVSSEGRGR Trigger: CCGGCCCCGCCCTTCAGAGGACACCTTCCTCATGCACCGGACACTGAGGCGATGGGAAGCGTAGACCCCAAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000292330.3 ENST00000470295.5 ENST00000476185.1 ENST00000487452.1 |
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| CDS CCA 72 bp | CCCTCGGACACGCTCTCCTCCAGGCCGCAGCGGATCTaGAACGACTTTCTCAGCTGTTCCTCCACGGCCTTC | + |
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Preference number: 6 (lower is better) Translates to: PSDTLSSRPQRI*NDFLSCSSTAF Trigger: GAAGGCCGTGGAGGAACAGCTGAGAAAGTCGTTCCAGATCCGCTGCGGCCTGGAGGAGAGCGTGTCCGAGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000292330.3 ENST00000470295.5 ENST00000476185.1 ENST00000487452.1 ENST00000491407.1 |
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| CDS TCA 72 bp | CTCGAGCCTGTGGCGGCAGGAGAGCCAATTTCTCCCTaGGCGCGGCATTCAGAACCTGTTCCTCCGGCACCT | + |
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Preference number: 6 (lower is better) Translates to: LEPVAAGEPISP*ARHSEPVPPAP Trigger: AGGTGCCGGAGGAACAGGTTCTGAATGCCGCGCTCAGGGAGAAATTGGCTCTCCTGCCGCCACAGGCTCGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000292330.3 ENST00000470295.5 ENST00000487452.1 ENST00000491407.1 |
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| CDS CAA 72 bp | TTAACACAAAAATACGAACTAGCCCTCCAGGGATCTTaGGGGTCTACGCTTCCCATCGCCTCAGTGTCCGGT | + |
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Preference number: 6 (lower is better) Translates to: LTQKYELALQGS*GSTLPIASVSG Trigger: ACCGGACACTGAGGCGATGGGAAGCGTAGACCCCAAAGATCCCTGGAGGGCTAGTTCGTATTTTTGTGTTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000292330.3 ENST00000470295.5 ENST00000476185.1 ENST00000487452.1 |
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