RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PPM1L (Homo sapiens)

Ensembl gene IDs: ENSG00000163590

Ensembl transcript IDs: ENST00000295839.9, ENST00000464260.5, ENST00000480117.1, ENST00000497343.5, ENST00000498165.6

Found 567 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGACAACCTGGCTTTCACCAGCCTACTGCTGCACCCTTGCACAGCTaGTGGCCCACTTGGGTGGAGGCTTCCAGTGGCACCCTCCACTGG +
Preference number: 1 (lower is better)
Translates to: GQPGFHQPTAAPLHS*WPTWVEASSGTLHW
Trigger: CCAGTGGAGGGTGCCACTGGAAGCCTCCACCCAAGTGGGCCAGCAGCTGTGCAAGGGTGCAGCAGTAGGCTGGTGAAAGCCAGGTTGTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498165.6
3UTR CCA 90 bp TTTCACCAGCCTACTGCTGCACCCTTGCACAGCTGCTGGCCCACTTaGGTGGAGGCTTCCAGTGGCACCCTCCACTGGGACAGTCCCACC +
Preference number: 1 (lower is better)
Translates to: FHQPTAAPLHSCWPT*VEASSGTLHWDSPT
Trigger: GGTGGGACTGTCCCAGTGGAGGGTGCCACTGGAAGCCTCCACCCAAGTGGGCCAGCAGCTGTGCAAGGGTGCAGCAGTAGGCTGGTGAAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498165.6
3UTR CCA 90 bp CAACCTGGCTTTCACCAGCCTACTGCTGCACCCTTGCACAGCTGCTaGCCCACTTGGGTGGAGGCTTCCAGTGGCACCCTCCACTGGGAC +
Preference number: 1 (lower is better)
Translates to: QPGFHQPTAAPLHSC*PTWVEASSGTLHWD
Trigger: GTCCCAGTGGAGGGTGCCACTGGAAGCCTCCACCCAAGTGGGCCAGCAGCTGTGCAAGGGTGCAGCAGTAGGCTGGTGAAAGCCAGGTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498165.6
3UTR GCA 90 bp AAAGATCTGGACAACCTGGCTTTCACCAGCCTACTGCTGCACCCTTaGACAGCTGCTGGCCCACTTGGGTGGAGGCTTCCAGTGGCACCC +
Preference number: 1 (lower is better)
Translates to: KDLDNLAFTSLLLHP*TAAGPLGWRLPVAP
Trigger: GGGTGCCACTGGAAGCCTCCACCCAAGTGGGCCAGCAGCTGTGCAAGGGTGCAGCAGTAGGCTGGTGAAAGCCAGGTTGTCCAGATCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498165.6
3UTR GCA 90 bp TACAATCCCTCTCCTGAAGTGGCAGCGAGTAACCCGGGCAGGCTTTaGTCTGGGTCACTCAGCCCTCTCTCCACCACAATCTGCCACCAG +
Preference number: 1 (lower is better)
Translates to: YNPSPEVAASNPGRL*SGSLSPLSTTICHQ
Trigger: CTGGTGGCAGATTGTGGTGGAGAGAGGGCTGAGTGACCCAGAGCAAAGCCTGCCCGGGTTACTCGCTGCCACTTCAGGAGAGGGATTGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498165.6
3UTR GCA 90 bp TCCCCTAGAAAGATCTGGACAACCTGGCTTTCACCAGCCTACTGCTaGACCCTTGCACAGCTGCTGGCCCACTTGGGTGGAGGCTTCCAG +
Preference number: 1 (lower is better)
Translates to: SPRKIWTTWLSPAYC*TLAQLLAHLGGGFQ
Trigger: CTGGAAGCCTCCACCCAAGTGGGCCAGCAGCTGTGCAAGGGTGCAGCAGTAGGCTGGTGAAAGCCAGGTTGTCCAGATCTTTCTAGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498165.6
3UTR GCA 90 bp CTTGAATTCCTGACTTACTGTGTTGCAACTGCCAGGTCCCTTTGCTaGCTCCCCTGCAGGCCTGCAGGCCACGGGGCGGTTTGTATTTGC +
Preference number: 1 (lower is better)
Translates to: LEFLTYCVATARSLC*LPCRPAGHGAVCIC
Trigger: GCAAATACAAACCGCCCCGTGGCCTGCAGGCCTGCAGGGGAGGCAGCAAAGGGACCTGGCAGTTGCAACACAGTAAGTCAGGAATTCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
3UTR GCA 90 bp ACGCTTGAATTCCTGACTTACTGTGTTGCAACTGCCAGGTCCCTTTaGTGCCTCCCCTGCAGGCCTGCAGGCCACGGGGCGGTTTGTATT +
Preference number: 1 (lower is better)
Translates to: TLEFLTYCVATARSL*CLPCRPAGHGAVCI
Trigger: AATACAAACCGCCCCGTGGCCTGCAGGCCTGCAGGGGAGGCAGCAAAGGGACCTGGCAGTTGCAACACAGTAAGTCAGGAATTCAAGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
3UTR CCA 90 bp GCCTCCCCTGCAGGCCTGCAGGCCACGGGGCGGTTTGTATTTGCCTaGGGAAAGCTCCCTGATGTGGATGGAGATTTGCAACCAAATGTT +
Preference number: 1 (lower is better)
Translates to: ASPAGLQATGRFVFA*GKLPDVDGDLQPNV
Trigger: AACATTTGGTTGCAAATCTCCATCCACATCAGGGAGCTTTCCCCAGGCAAATACAAACCGCCCCGTGGCCTGCAGGCCTGCAGGGGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
3UTR CCA 90 bp CCAGTGGAGCAGCAGCAGAGCACTGCATTAATGGAGACCTGGGCCTaGCATCGTGCTGGGGTCTCAGAAGCACATGGCCATTCCTGTCTT +
Preference number: 1 (lower is better)
Translates to: PVEQQQSTALMETWA*HRAGVSEAHGHSCL
Trigger: AAGACAGGAATGGCCATGTGCTTCTGAGACCCCAGCACGATGCCAGGCCCAGGTCTCCATTAATGCAGTGCTCTGCTGCTGCTCCACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498165.6
3UTR CCA 90 bp AAATTGCCAGTGGAGCAGCAGCAGAGCACTGCATTAATGGAGACCTaGGCCTGGCATCGTGCTGGGGTCTCAGAAGCACATGGCCATTCC +
Preference number: 1 (lower is better)
Translates to: KLPVEQQQSTALMET*AWHRAGVSEAHGHS
Trigger: GGAATGGCCATGTGCTTCTGAGACCCCAGCACGATGCCAGGCCCAGGTCTCCATTAATGCAGTGCTCTGCTGCTGCTCCACTGGCAATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498165.6
3UTR CCA 90 bp GAAGCAAGGGAAGAGGGTTATCTCTGCTGTGCAGGCAGTTGCCACTaGTCTCTCATTCTCTCTGCTTCTCGCAGTCCCCAAGAGCAGCCA +
Preference number: 1 (lower is better)
Translates to: EAREEGYLCCAGSCH*SLILSASRSPQEQP
Trigger: TGGCTGCTCTTGGGGACTGCGAGAAGCAGAGAGAATGAGAGACCAGTGGCAACTGCCTGCACAGCAGAGATAACCCTCTTCCCTTGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
3UTR TCA 90 bp CAGTTTGATGGTGGGTGGGGGCAACTCTTAGGAGTCAGAATGTCCTaGATTTCCAAGCAAACTCAGCCGCCTGGCCTGGCCATCTCAGCA +
Preference number: 1 (lower is better)
Translates to: QFDGGWGQLLGVRMS*ISKQTQPPGLAISA
Trigger: TGCTGAGATGGCCAGGCCAGGCGGCTGAGTTTGCTTGGAAATTCAGGACATTCTGACTCCTAAGAGTTGCCCCCACCCACCATCAAACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498165.6
3UTR TCA 90 bp GACACCCCAATAGGGTGTAAGCCCCAAGAAGGCAGTGATGGCGCCTaGGTGCTCACCATGGATACATTCACTCAGACACAGTCACTGCCT +
Preference number: 1 (lower is better)
Translates to: DTPIGCKPQEGSDGA*VLTMDTFTQTQSLP
Trigger: AGGCAGTGACTGTGTCTGAGTGAATGTATCCATGGTGAGCACTCAGGCGCCATCACTGCCTTCTTGGGGCTTACACCCTATTGGGGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498165.6
3UTR GCA 90 bp GCAGCAGCAGAGCACTGCATTAATGGAGACCTGGGCCTGGCATCGTaGTGGGGTCTCAGAAGCACATGGCCATTCCTGTCTTCATTTCTA +
Preference number: 1 (lower is better)
Translates to: AAAEHCINGDLGLAS*WGLRSTWPFLSSFL
Trigger: TAGAAATGAAGACAGGAATGGCCATGTGCTTCTGAGACCCCAGCACGATGCCAGGCCCAGGTCTCCATTAATGCAGTGCTCTGCTGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498165.6
3UTR GCA 90 bp TGCTCTGGGTCACTCAGCCCTCTCTCCACCACAATCTGCCACCAGTaGCCTTACAGTAATCTGCTTGTGCTCAATGTCCTCGGAGGTTTT +
Preference number: 1 (lower is better)
Translates to: CSGSLSPLSTTICHQ*PYSNLLVLNVLGGF
Trigger: AAAACCTCCGAGGACATTGAGCACAAGCAGATTACTGTAAGGGCACTGGTGGCAGATTGTGGTGGAGAGAGGGCTGAGTGACCCAGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498165.6
3UTR CCA 90 bp AGGGCAGGGTTCCACGGCGAGGAGGTGGCCGGTGAATGTGGCATATaGGAAGCTATAACCACAAATGCTCACAGGGAAAGAACAAAACCA +
Preference number: 1 (lower is better)
Translates to: RAGFHGEEVAGECGI*EAITTNAHRERTKP
Trigger: TGGTTTTGTTCTTTCCCTGTGAGCATTTGTGGTTATAGCTTCCCATATGCCACATTCACCGGCCACCTCCTCGCCGTGGAACCCTGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
3UTR CCA 90 bp GGTGTAAGCCCCAAGAAGGCAGTGATGGCGCCTGAGTGCTCACCATaGATACATTCACTCAGACACAGTCACTGCCTGGCACATAGTAGA +
Preference number: 1 (lower is better)
Translates to: GVSPKKAVMAPECSP*IHSLRHSHCLAHSR
Trigger: TCTACTATGTGCCAGGCAGTGACTGTGTCTGAGTGAATGTATCCATGGTGAGCACTCAGGCGCCATCACTGCCTTCTTGGGGCTTACACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498165.6
3UTR GCA 90 bp TTAAAGGAAGCAAGGGAAGAGGGTTATCTCTGCTGTGCAGGCAGTTaGCACTGGTCTCTCATTCTCTCTGCTTCTCGCAGTCCCCAAGAG +
Preference number: 1 (lower is better)
Translates to: LKEAREEGYLCCAGS*HWSLILSASRSPQE
Trigger: CTCTTGGGGACTGCGAGAAGCAGAGAGAATGAGAGACCAGTGGCAACTGCCTGCACAGCAGAGATAACCCTCTTCCCTTGCTTCCTTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
3UTR TCA 90 bp GGGTGGTCTGTCCTGTCCACTGTTACAAAGAGAGGACACAACAGCTaGTGCCTGGAGGACCCTGAACAGGATCTTGAAAAGAATCTTCAG +
Preference number: 1 (lower is better)
Translates to: GWSVLSTVTKRGHNS*CLEDPEQDLEKNLQ
Trigger: CTGAAGATTCTTTTCAAGATCCTGTTCAGGGTCCTCCAGGCATCAGCTGTTGTGTCCTCTCTTTGTAACAGTGGACAGGACAGACCACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
3UTR GCA 90 bp TTATCTCTGCTGTGCAGGCAGTTGCCACTGGTCTCTCATTCTCTCTaGTTCTCGCAGTCCCCAAGAGCAGCCAAAATAGTAAACCATTCC +
Preference number: 1 (lower is better)
Translates to: LSLLCRQLPLVSHSL*FSQSPRAAKIVNHS
Trigger: GGAATGGTTTACTATTTTGGCTGCTCTTGGGGACTGCGAGAAGCAGAGAGAATGAGAGACCAGTGGCAACTGCCTGCACAGCAGAGATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
3UTR GCA 90 bp GTCAAGGAGAAGCTTATCCCAGTAGTTTCCCACCAAATCCCAAGCTaGAGTAGCTGGGAACTCTGCACCTGGCTTCAAGGAACACACATA +
Preference number: 1 (lower is better)
Translates to: VKEKLIPVVSHQIPS*SSWELCTWLQGTHI
Trigger: TATGTGTGTTCCTTGAAGCCAGGTGCAGAGTTCCCAGCTACTGCAGCTTGGGATTTGGTGGGAAACTACTGGGATAAGCTTCTCCTTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
3UTR TCA 90 bp GCTATGGGCTGTAAAGTGCTGACACCATTGGTGCTGATTTCAGTTTaGTGGTGGGTGGGGGCAACTCTTAGGAGTCAGAATGTCCTGAAT +
Preference number: 1 (lower is better)
Translates to: AMGCKVLTPLVLISV*WWVGATLRSQNVLN
Trigger: ATTCAGGACATTCTGACTCCTAAGAGTTGCCCCCACCCACCATCAAACTGAAATCAGCACCAATGGTGTCAGCACTTTACAGCCCATAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498165.6
3UTR GCA 90 bp GCCCTCTCTCCACCACAATCTGCCACCAGTGCCCTTACAGTAATCTaGTTGTGCTCAATGTCCTCGGAGGTTTTTGAGATTAACTTGGAT +
Preference number: 1 (lower is better)
Translates to: ALSPPQSATSALTVI*LCSMSSEVFEINLD
Trigger: ATCCAAGTTAATCTCAAAAACCTCCGAGGACATTGAGCACAAGCAGATTACTGTAAGGGCACTGGTGGCAGATTGTGGTGGAGAGAGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498165.6
3UTR CCA 90 bp GGAAGCTATAACCACAAATGCTCACAGGGAAAGAACAAAACCAGGTaGATACAGAGGGCTGGGAGGCAACGGAAGTTTCGTTTGGCTGTT +
Preference number: 1 (lower is better)
Translates to: GSYNHKCSQGKNKTR*IQRAGRQRKFRLAV
Trigger: AACAGCCAAACGAAACTTCCGTTGCCTCCCAGCCCTCTGTATCCACCTGGTTTTGTTCTTTCCCTGTGAGCATTTGTGGTTATAGCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
3UTR TCA 90 bp AATAATTCTGGCCCACTTATCAATATGGGTTCACGCTTGAATTCCTaGCTTACTGTGTTGCAACTGCCAGGTCCCTTTGCTGCCTCCCCT +
Preference number: 1 (lower is better)
Translates to: NNSGPLINMGSRLNS*LTVLQLPGPFAASP
Trigger: AGGGGAGGCAGCAAAGGGACCTGGCAGTTGCAACACAGTAAGTCAGGAATTCAAGCGTGAACCCATATTGATAAGTGGGCCAGAATTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
3UTR TCA 90 bp TGGATACAGAGGGCTGGGAGGCAACGGAAGTTTCGTTTGGCTGTTTaGGTCACCTTAGGCAAAGAGAGTGACCCAGCATTTTCTCTAAAT +
Preference number: 1 (lower is better)
Translates to: WIQRAGRQRKFRLAV*VTLGKESDPAFSLN
Trigger: ATTTAGAGAAAATGCTGGGTCACTCTCTTTGCCTAAGGTGACTCAAACAGCCAAACGAAACTTCCGTTGCCTCCCAGCCCTCTGTATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
3UTR GCA 90 bp ACTCTGCACCTGGCTTCAAGGAACACACATACAGTTATAGGCTGCTaGTTCTCAGAACACTGCCTGACACTTGAAAACCACTTGGAAAGG +
Preference number: 1 (lower is better)
Translates to: TLHLASRNTHTVIGC*FSEHCLTLENHLER
Trigger: CCTTTCCAAGTGGTTTTCAAGTGTCAGGCAGTGTTCTGAGAAGCAGCAGCCTATAACTGTATGTGTGTTCCTTGAAGCCAGGTGCAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
3UTR GCA 90 bp GGAACTCTGCACCTGGCTTCAAGGAACACACATACAGTTATAGGCTaGTGCTTCTCAGAACACTGCCTGACACTTGAAAACCACTTGGAA +
Preference number: 1 (lower is better)
Translates to: GTLHLASRNTHTVIG*CFSEHCLTLENHLE
Trigger: TTCCAAGTGGTTTTCAAGTGTCAGGCAGTGTTCTGAGAAGCAGCAGCCTATAACTGTATGTGTGTTCCTTGAAGCCAGGTGCAGAGTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
3UTR GCA 90 bp TATTTAACTATTAAAGGAAGCAAGGGAAGAGGGTTATCTCTGCTGTaGAGGCAGTTGCCACTGGTCTCTCATTCTCTCTGCTTCTCGCAG +
Preference number: 1 (lower is better)
Translates to: YLTIKGSKGRGLSLL*RQLPLVSHSLCFSQ
Trigger: CTGCGAGAAGCAGAGAGAATGAGAGACCAGTGGCAACTGCCTGCACAGCAGAGATAACCCTCTTCCCTTGCTTCCTTTAATAGTTAAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
3UTR GCA 90 bp CTCCCTGATGTGGATGGAGATTTGCAACCAAATGTTGAAGACTGCTaGCTTTCCATTGTCAAGGAGAAGCTTATCCCAGTAGTTTCCCAC +
Preference number: 1 (lower is better)
Translates to: LPDVDGDLQPNVEDC*LSIVKEKLIPVVSH
Trigger: GTGGGAAACTACTGGGATAAGCTTCTCCTTGACAATGGAAAGGCAGCAGTCTTCAACATTTGGTTGCAAATCTCCATCCACATCAGGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
3UTR GCA 90 bp GGTTTGTATTTGCCTGGGGAAAGCTCCCTGATGTGGATGGAGATTTaGAACCAAATGTTGAAGACTGCTGCCTTTCCATTGTCAAGGAGA +
Preference number: 1 (lower is better)
Translates to: GLYLPGESSLMWMEI*NQMLKTAAFPLSRR
Trigger: TCTCCTTGACAATGGAAAGGCAGCAGTCTTCAACATTTGGTTGCAAATCTCCATCCACATCAGGGAGCTTTCCCCAGGCAAATACAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
3UTR GCA 90 bp TCTCCACCACAATCTGCCACCAGTGCCCTTACAGTAATCTGCTTGTaGTCAATGTCCTCGGAGGTTTTTGAGATTAACTTGGATTTGGCA +
Preference number: 1 (lower is better)
Translates to: SPPQSATSALTVICL*SMSSEVFEINLDLA
Trigger: TGCCAAATCCAAGTTAATCTCAAAAACCTCCGAGGACATTGAGCACAAGCAGATTACTGTAAGGGCACTGGTGGCAGATTGTGGTGGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498165.6
3UTR CCA 90 bp AAACCATTCCAAATCTGCTTCCAAGCTGCTACTGAGCAGAAAACATaGGCTCAGAAGGACAAAGCATTCTCAGGACAGCTCTGTCTCTTG +
Preference number: 1 (lower is better)
Translates to: KPFQICFQAATEQKT*AQKDKAFSGQLCLL
Trigger: CAAGAGACAGAGCTGTCCTGAGAATGCTTTGTCCTTCTGAGCCCATGTTTTCTGCTCAGTAGCAGCTTGGAAGCAGATTTGGAATGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
3UTR GCA 90 bp AAGCTCCCTGATGTGGATGGAGATTTGCAACCAAATGTTGAAGACTaGTGCCTTTCCATTGTCAAGGAGAAGCTTATCCCAGTAGTTTCC +
Preference number: 1 (lower is better)
Translates to: KLPDVDGDLQPNVED*CLSIVKEKLIPVVS
Trigger: GGAAACTACTGGGATAAGCTTCTCCTTGACAATGGAAAGGCAGCAGTCTTCAACATTTGGTTGCAAATCTCCATCCACATCAGGGAGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
3UTR GCA 90 bp GAGTCTAGGAAGCCTTGGGTGACAATTCCAAAGCTTTGGCAGTGCTaGTTAGGGAAGCTTCACATGCAAACATCTCAAATCAATTTCCCT +
Preference number: 1 (lower is better)
Translates to: ESRKPWVTIPKLWQC*LGKLHMQTSQINFP
Trigger: AGGGAAATTGATTTGAGATGTTTGCATGTGAAGCTTCCCTAAGCAGCACTGCCAAAGCTTTGGAATTGTCACCCAAGGCTTCCTAGACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498165.6
3UTR GCA 90 bp AGGGAGTCTAGGAAGCCTTGGGTGACAATTCCAAAGCTTTGGCAGTaGTGCTTAGGGAAGCTTCACATGCAAACATCTCAAATCAATTTC +
Preference number: 1 (lower is better)
Translates to: RESRKPWVTIPKLWQ*CLGKLHMQTSQINF
Trigger: GAAATTGATTTGAGATGTTTGCATGTGAAGCTTCCCTAAGCAGCACTGCCAAAGCTTTGGAATTGTCACCCAAGGCTTCCTAGACTCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498165.6
3UTR GCA 90 bp AAGACGCCTTGTGAACCTCAATTAGAGAGAAAGTTATGTAACTCGTaGACTCAGCACCATCTGTTAAGAAATTCTGCAGGGCACGTAACC +
Preference number: 1 (lower is better)
Translates to: KTPCEPQLERKLCNS*TQHHLLRNSAGHVT
Trigger: GGTTACGTGCCCTGCAGAATTTCTTAACAGATGGTGCTGAGTGCACGAGTTACATAACTTTCTCTCTAATTGAGGTTCACAAGGCGTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498165.6
3UTR CCA 90 bp ACCTGTGACTGTGTTTATCTGACTTCAGTTTTACTGTCCACGATTTaGAACGTGAATGGAATCTGGGACAGTAAAGGTGTTGAGGAGAGC +
Preference number: 1 (lower is better)
Translates to: TCDCVYLTSVLLSTI*NVNGIWDSKGVEES
Trigger: GCTCTCCTCAACACCTTTACTGTCCCAGATTCCATTCACGTTCCAAATCGTGGACAGTAAAACTGAAGTCAGATAAACACAGTCACAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498165.6
3UTR GCA 90 bp ATAAATGAAACCACATCTCTAAATACAGTCTATGCCTTTGCTGCATaGTTGCTTTTTGGTGGAGCTTTGAACAGGGAAACTGTCTGTGAT +
Preference number: 1 (lower is better)
Translates to: INETTSLNTVYAFAA*LLFGGALNRETVCD
Trigger: ATCACAGACAGTTTCCCTGTTCAAAGCTCCACCAAAAAGCAAGCATGCAGCAAAGGCATAGACTGTATTTAGAGATGTGGTTTCATTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498165.6
3UTR TCA 90 bp CCAGCTTACATCCTTCACTATAACACTCTCTGTATAATATTCTTATaGCATATACAAGATTCAAGAAGCCAATACCTCAGTCCACAGCAA +
Preference number: 1 (lower is better)
Translates to: PAYILHYNTLCIIFL*HIQDSRSQYLSPQQ
Trigger: TTGCTGTGGACTGAGGTATTGGCTTCTTGAATCTTGTATATGTCATAAGAATATTATACAGAGAGTGTTATAGTGAAGGATGTAAGCTGG
37% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498165.6
3UTR GCA 90 bp TACAAAAGTAAGCAAATCTCATGGGAAATCATTAGCAATTCTCAGTaGAGTCAAAGAAAGTTAAGTGCTTGGAGAAATCAAGACAGATTG +
Preference number: 1 (lower is better)
Translates to: YKSKQISWEIISNSQ*SQRKLSAWRNQDRL
Trigger: CAATCTGTCTTGATTTCTCCAAGCACTTAACTTTCTTTGACTGCACTGAGAATTGCTAATGATTTCCCATGAGATTTGCTTACTTTTGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
3UTR CAA 90 bp CTTTCACCAGCCTACTGCTGCACCCTTGCACAGCTGCTGGCCCACTaGGGTGGAGGCTTCCAGTGGCACCCTCCACTGGGACAGTCCCAC +
Preference number: 2 (lower is better)
Translates to: LSPAYCCTLAQLLAH*GGGFQWHPPLGQSH
Trigger: GTGGGACTGTCCCAGTGGAGGGTGCCACTGGAAGCCTCCACCCAAGTGGGCCAGCAGCTGTGCAAGGGTGCAGCAGTAGGCTGGTGAAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498165.6
3UTR-3UTR TCA 90 bp CTACTGCTGCACCCTTGCACAGCTGCTGGCCCACTTGGGTGGAGGCTTCCAGTGGGGCACCCCCAGGAGTaGTGTCTGCACATCCCCAAC +
Preference number: 2 (lower is better)
Translates to: LLLHPCTAAGPLGWRLPVGHPQE*CLHIPN
Trigger: GTTGGGGATGTGCAGACATCACTCCTGGGGGTGCCC...CACTGGAAGCCTCCACCCAAGTGGGCCAGCAGCTGTGCAAGGGTGCAGCAGTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000498165.6
3UTR CAA 90 bp GAAAGATCTGGACAACCTGGCTTTCACCAGCCTACTGCTGCACCCTaGCACAGCTGCTGGCCCACTTGGGTGGAGGCTTCCAGTGGCACC +
Preference number: 2 (lower is better)
Translates to: ERSGQPGFHQPTAAP*HSCWPTWVEASSGT
Trigger: GGTGCCACTGGAAGCCTCCACCCAAGTGGGCCAGCAGCTGTGCAAGGGTGCAGCAGTAGGCTGGTGAAAGCCAGGTTGTCCAGATCTTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498165.6
3UTR-3UTR TCA 90 bp ACAGAGGGCTGGGAGGCAACGGAAGTTTCGTTTGGCTGTTTGAGTCACCTTAGGCTGACCACTCACAGGTaGCGCAGTGGCCTGTCTCCT +
Preference number: 2 (lower is better)
Translates to: TEGWEATEVSFGCLSHLRLTTHR*RSGLSP
Trigger: AGGAGACAGGCCACTGCGTCACCTGTGAGTGGTCAG...CCTAAGGTGACTCAAACAGCCAAACGAAACTTCCGTTGCCTCCCAGCCCTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
3UTR CAA 90 bp ACATGGGCTCAGAAGGACAAAGCATTCTCAGGACAGCTCTGTCTCTaGGCAGAGGGTGTTGCCACATCAGCCCCTGACCACTCACAGGTG +
Preference number: 2 (lower is better)
Translates to: TWAQKDKAFSGQLCL*AEGVATSAPDHSQV
Trigger: CACCTGTGAGTGGTCAGGGGCTGATGTGGCAACACCCTCTGCCAAGAGACAGAGCTGTCCTGAGAATGCTTTGTCCTTCTGAGCCCATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
3UTR-3UTR TCA 90 bp GACTATTGGCAATTCGAACTCGAGCTAGCTAGGGAGTCTAGGAAGCCTTGGGTGCGAGGAGGTGGCCGGTaGATGTGGCATATGGGAAGC +
Preference number: 2 (lower is better)
Translates to: DYWQFELELARESRKPWVRGGGR*MWHMGS
Trigger: GCTTCCCATATGCCACATTCACCGGCCACCTCCTCG...CACCCAAGGCTTCCTAGACTCCCTAGCTAGCTCGAGTTCGAATTGCCAATAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498165.6
3UTR-3UTR CCA 90 bp CTACTGCTGCACCCTTGCACAGCTGCTGGCCCACTTGGGTGGAGGCTTCCAGTGTCATTTCCCCTAACGTaGTTTCTTGGTCACGTAAGA +
Preference number: 2 (lower is better)
Translates to: LLLHPCTAAGPLGWRLPVSFPLT*FLGHVR
Trigger: TCTTACGTGACCAAGAAACCACGTTAGGGGAAATGA...CACTGGAAGCCTCCACCCAAGTGGGCCAGCAGCTGTGCAAGGGTGCAGCAGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498165.6
3UTR-3UTR TCA 90 bp CTACTGCTGCACCCTTGCACAGCTGCTGGCCCACTTGGGTGGAGGCTTCCAGTGTTTTTCCCTGATACTTaGCTATTACATCCGCCTTTG +
Preference number: 2 (lower is better)
Translates to: LLLHPCTAAGPLGWRLPVFFPDT*LLHPPL
Trigger: CAAAGGCGGATGTAATAGTCAAGTATCAGGGAAAAA...CACTGGAAGCCTCCACCCAAGTGGGCCAGCAGCTGTGCAAGGGTGCAGCAGTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498165.6
3UTR-3UTR GCA 90 bp AGAACAAAACCAGGTGGATACAGAGGGCTGGGAGGCAACGGAAGTTTCGTTTGGGGGTTATCTCTGCTGTaGAGGCAGTTGCCACTGGTC +
Preference number: 2 (lower is better)
Translates to: RTKPGGYRGLGGNGSFVWGLSLL*RQLPLV
Trigger: GACCAGTGGCAACTGCCTGCACAGCAGAGATAACCC...CCAAACGAAACTTCCGTTGCCTCCCAGCCCTCTGTATCCACCTGGTTTTGTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
3UTR-3UTR CCA 90 bp GACTATTGGCAATTCGAACTCGAGCTAGCTAGGGAGTCTAGGAAGCCTTGGGTGTCCTGCAGCACTGGGTaGTCTGTCCTGTCCACTGTT +
Preference number: 2 (lower is better)
Translates to: DYWQFELELARESRKPWVSCSTG*SVLSTV
Trigger: AACAGTGGACAGGACAGACCACCCAGTGCTGCAGGA...CACCCAAGGCTTCCTAGACTCCCTAGCTAGCTCGAGTTCGAATTGCCAATAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498165.6
3UTR CAA 90 bp TACCCGAGCACCCATCAAAGCGACCCAAATGACACGCCATGCATCTaGAGTGACCGTGCACTGCCATATACTCTGAGCTCTACTACAGGT +
Preference number: 2 (lower is better)
Translates to: YPSTHQSDPNDTPCI*SDRALPYTLSSTTG
Trigger: ACCTGTAGTAGAGCTCAGAGTATATGGCAGTGCACGGTCACTCAAGATGCATGGCGTGTCATTTGGGTCGCTTTGATGGGTGCTCGGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498165.6
3UTR-3UTR TCA 90 bp ACCACAAATGCTCACAGGGAAAGAACAAAACCAGGTGGATACAGAGGGCTGGGAAGAGGACACAACAGCTaGTGCCTGGAGGACCCTGAA +
Preference number: 2 (lower is better)
Translates to: TTNAHRERTKPGGYRGLGRGHNS*CLEDPE
Trigger: TTCAGGGTCCTCCAGGCATCAGCTGTTGTGTCCTCT...TCCCAGCCCTCTGTATCCACCTGGTTTTGTTCTTTCCCTGTGAGCATTTGTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
3UTR-3UTR GCA 90 bp ACAGAGGGCTGGGAGGCAACGGAAGTTTCGTTTGGCTGTTTGAGTCACCTTAGGGTCTCTCATTCTCTCTaGTTCTCGCAGTCCCCAAGA +
Preference number: 2 (lower is better)
Translates to: TEGWEATEVSFGCLSHLRVSHSL*FSQSPR
Trigger: TCTTGGGGACTGCGAGAAGCAGAGAGAATGAGAGAC...CCTAAGGTGACTCAAACAGCCAAACGAAACTTCCGTTGCCTCCCAGCCCTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
3UTR-3UTR CCA 90 bp GCAGAAAACATGGGCTCAGAAGGACAAAGCATTCTCAGGACAGCTCTGTCTCTTTCACAGGTGACGCAGTaGCCTGTCTCCTGCAGCACT +
Preference number: 2 (lower is better)
Translates to: AENMGSEGQSILRTALSLSQVTQ*PVSCST
Trigger: AGTGCTGCAGGAGACAGGCCACTGCGTCACCTGTGA...AAGAGACAGAGCTGTCCTGAGAATGCTTTGTCCTTCTGAGCCCATGTTTTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
3UTR-3UTR CCA 90 bp ACCACAAATGCTCACAGGGAAAGAACAAAACCAGGTGGATACAGAGGGCTGGGACCAAGCTGCAGTAGCTaGGAACTCTGCACCTGGCTT +
Preference number: 2 (lower is better)
Translates to: TTNAHRERTKPGGYRGLGPSCSS*ELCTWL
Trigger: AAGCCAGGTGCAGAGTTCCCAGCTACTGCAGCTTGG...TCCCAGCCCTCTGTATCCACCTGGTTTTGTTCTTTCCCTGTGAGCATTTGTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
3UTR CAA 90 bp ATTAAAGGAAGCAAGGGAAGAGGGTTATCTCTGCTGTGCAGGCAGTaGCCACTGGTCTCTCATTCTCTCTGCTTCTCGCAGTCCCCAAGA +
Preference number: 2 (lower is better)
Translates to: IKGSKGRGLSLLCRQ*PLVSHSLCFSQSPR
Trigger: TCTTGGGGACTGCGAGAAGCAGAGAGAATGAGAGACCAGTGGCAACTGCCTGCACAGCAGAGATAACCCTCTTCCCTTGCTTCCTTTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
3UTR-3UTR TCA 90 bp CTCAGTCCACAGCAAGGAATAAAATGCAGCCACTGGTTACCAGTACTATGTACACTGACCACTCACAGGTaGCGCAGTGGCCTGTCTCCT +
Preference number: 2 (lower is better)
Translates to: LSPQQGIKCSHWLPVLCTLTTHR*RSGLSP
Trigger: AGGAGACAGGCCACTGCGTCACCTGTGAGTGGTCAG...TGTACATAGTACTGGTAACCAGTGGCTGCATTTTATTCCTTGCTGTGGACTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498165.6
3UTR-3UTR GCA 90 bp ACCACAAATGCTCACAGGGAAAGAACAAAACCAGGTGGATACAGAGGGCTGGGAGAAGAGGGTTATCTCTaGTGTGCAGGCAGTTGCCAC +
Preference number: 2 (lower is better)
Translates to: TTNAHRERTKPGGYRGLGEEGYL*CAGSCH
Trigger: GTGGCAACTGCCTGCACAGCAGAGATAACCCTCTTC...TCCCAGCCCTCTGTATCCACCTGGTTTTGTTCTTTCCCTGTGAGCATTTGTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
3UTR-3UTR GCA 90 bp ACCACAAATGCTCACAGGGAAAGAACAAAACCAGGTGGATACAGAGGGCTGGGACCTGACTTACTGTGTTaGAACTGCCAGGTCCCTTTG +
Preference number: 2 (lower is better)
Translates to: TTNAHRERTKPGGYRGLGPDLLC*NCQVPL
Trigger: CAAAGGGACCTGGCAGTTGCAACACAGTAAGTCAGG...TCCCAGCCCTCTGTATCCACCTGGTTTTGTTCTTTCCCTGTGAGCATTTGTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
3UTR-3UTR CCA 90 bp GCACCTGGCTTCAAGGAACACACATACAGTTATAGGCTGCTGCTTCTCAGAACAGCAGGCAGTTGCCACTaGTCTCTCATTCTCTCTGCT +
Preference number: 2 (lower is better)
Translates to: APGFKEHTYSYRLLLLRTAGSCH*SLILSA
Trigger: AGCAGAGAGAATGAGAGACCAGTGGCAACTGCCTGC...TGTTCTGAGAAGCAGCAGCCTATAACTGTATGTGTGTTCCTTGAAGCCAGGTGC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
3UTR CAA 90 bp CCTGGGGAAAGCTCCCTGATGTGGATGGAGATTTGCAACCAAATGTaGAAGACTGCTGCCTTTCCATTGTCAAGGAGAAGCTTATCCCAG +
Preference number: 2 (lower is better)
Translates to: PGESSLMWMEICNQM*KTAAFPLSRRSLSQ
Trigger: CTGGGATAAGCTTCTCCTTGACAATGGAAAGGCAGCAGTCTTCAACATTTGGTTGCAAATCTCCATCCACATCAGGGAGCTTTCCCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
3UTR-3UTR TCA 90 bp AGGAAGCAAGGGAAGAGGGTTATCTCTGCTGTGCAGGCAGTTGCCACTGGTCTCATTTTGGACACTGGATaGAAGAGTTGGGAAAACATG +
Preference number: 2 (lower is better)
Translates to: RKQGKRVISAVQAVATGLILDTG*KSWENM
Trigger: CATGTTTTCCCAACTCTTTCATCCAGTGTCCAAAAT...GAGACCAGTGGCAACTGCCTGCACAGCAGAGATAACCCTCTTCCCTTGCTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
3UTR-3UTR TCA 90 bp AGAACAAAACCAGGTGGATACAGAGGGCTGGGAGGCAACGGAAGTTTCGTTTGGTCACGCTTGAATTCCTaGCTTACTGTGTTGCAACTG +
Preference number: 2 (lower is better)
Translates to: RTKPGGYRGLGGNGSFVWSRLNS*LTVLQL
Trigger: CAGTTGCAACACAGTAAGTCAGGAATTCAAGCGTGA...CCAAACGAAACTTCCGTTGCCTCCCAGCCCTCTGTATCCACCTGGTTTTGTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
3UTR-3UTR GCA 90 bp AACCACAAATGCTCACAGGGAAAGAACAAAACCAGGTGGATACAGAGGGCTGGGACAGTTATAGGCTGCTaGTTCTCAGAACACTGCCTG +
Preference number: 2 (lower is better)
Translates to: NHKCSQGKNKTRWIQRAGTVIGC*FSEHCL
Trigger: CAGGCAGTGTTCTGAGAAGCAGCAGCCTATAACTGT...CCCAGCCCTCTGTATCCACCTGGTTTTGTTCTTTCCCTGTGAGCATTTGTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
3UTR-3UTR GCA 90 bp AGAACAAAACCAGGTGGATACAGAGGGCTGGGAGGCAACGGAAGTTTCGTTTGGCATACAGTTATAGGCTaGTGCTTCTCAGAACACTGC +
Preference number: 2 (lower is better)
Translates to: RTKPGGYRGLGGNGSFVWHTVIG*CFSEHC
Trigger: GCAGTGTTCTGAGAAGCAGCAGCCTATAACTGTATG...CCAAACGAAACTTCCGTTGCCTCCCAGCCCTCTGTATCCACCTGGTTTTGTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
3UTR CAA 90 bp CGGTTTGTATTTGCCTGGGGAAAGCTCCCTGATGTGGATGGAGATTaGCAACCAAATGTTGAAGACTGCTGCCTTTCCATTGTCAAGGAG +
Preference number: 2 (lower is better)
Translates to: RFVFAWGKLPDVDGD*QPNVEDCCLSIVKE
Trigger: CTCCTTGACAATGGAAAGGCAGCAGTCTTCAACATTTGGTTGCAAATCTCCATCCACATCAGGGAGCTTTCCCCAGGCAAATACAAACCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
3UTR-3UTR TCA 90 bp TGGGTGGTCTGTCCTGTCCACTGTTACAAAGAGAGGACACAACAGCTGATGCCTAAGAGACCAGTGTGTTaGAAGTCCTTTAGTCTAAGG +
Preference number: 2 (lower is better)
Translates to: WVVCPVHCYKERTQQLMPKRPVC*KSFSLR
Trigger: CCTTAGACTAAAGGACTTTCAACACACTGGTCTCTT...AGGCATCAGCTGTTGTGTCCTCTCTTTGTAACAGTGGACAGGACAGACCACCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
3UTR-3UTR GCA 90 bp AGAACAAAACCAGGTGGATACAGAGGGCTGGGAGGCAACGGAAGTTTCGTTTGGTCACTCCTTTCTCAATaGAAACAGCTTACTTGCCAG +
Preference number: 2 (lower is better)
Translates to: RTKPGGYRGLGGNGSFVWSLLSQ*KQLTCQ
Trigger: CTGGCAAGTAAGCTGTTTGCATTGAGAAAGGAGTGA...CCAAACGAAACTTCCGTTGCCTCCCAGCCCTCTGTATCCACCTGGTTTTGTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
3UTR-3UTR CCA 90 bp AAGAAAGTTAAGTGCTTGGAGAAATCAAGACAGATTGCAGCCCTCCACATCTACTCCTGCAGCACTGGGTaGTCTGTCCTGTCCACTGTT +
Preference number: 2 (lower is better)
Translates to: KKVKCLEKSRQIAALHIYSCSTG*SVLSTV
Trigger: AACAGTGGACAGGACAGACCACCCAGTGCTGCAGGA...GTAGATGTGGAGGGCTGCAATCTGTCTTGATTTCTCCAAGCACTTAACTTTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
3UTR-3UTR CCA 90 bp ACCACAAATGCTCACAGGGAAAGAACAAAACCAGGTGGATACAGAGGGCTGGGAGAAAGCTCCCTGATGTaGATGGAGATTTGCAACCAA +
Preference number: 2 (lower is better)
Translates to: TTNAHRERTKPGGYRGLGESSLM*MEICNQ
Trigger: TTGGTTGCAAATCTCCATCCACATCAGGGAGCTTTC...TCCCAGCCCTCTGTATCCACCTGGTTTTGTTCTTTCCCTGTGAGCATTTGTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
3UTR-3UTR CCA 90 bp TCCACAGAGCAGGATTTAGACGTTTTCATTACTACACGAAGAAGTCATCATTTGGGCCTGGCATCGTGCTaGGGTCTCAGAAGCACATGG +
Preference number: 2 (lower is better)
Translates to: STEQDLDVFITTRRSHHLGLASC*GLRSTW
Trigger: CCATGTGCTTCTGAGACCCCAGCACGATGCCAGGCC...CAAATGATGACTTCTTCGTGTAGTAATGAAAACGTCTAAATCCTGCTCTGTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498165.6
3UTR CAA 90 bp CTCTCTCCACCACAATCTGCCACCAGTGCCCTTACAGTAATCTGCTaGTGCTCAATGTCCTCGGAGGTTTTTGAGATTAACTTGGATTTG +
Preference number: 2 (lower is better)
Translates to: LSPPQSATSALTVIC*CSMSSEVFEINLDL
Trigger: CAAATCCAAGTTAATCTCAAAAACCTCCGAGGACATTGAGCACAAGCAGATTACTGTAAGGGCACTGGTGGCAGATTGTGGTGGAGAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498165.6
3UTR-3UTR TCA 90 bp AGGGAAGAGGGTTATCTCTGCTGTGCAGGCAGTTGCCACTGGTCTCTCATTCTCTTCAGGGAGACTAAATaGCACATATGCTATTCACTT +
Preference number: 2 (lower is better)
Translates to: REEGYLCCAGSCHWSLILFRETK*HICYSL
Trigger: AAGTGAATAGCATATGTGTCATTTAGTCTCCCTGAA...GAGAATGAGAGACCAGTGGCAACTGCCTGCACAGCAGAGATAACCCTCTTCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
3UTR-3UTR TCA 90 bp AACCACAAATGCTCACAGGGAAAGAACAAAACCAGGTGGATACAGAGGGCTGGGTTTGCAACCAAATGTTaGAGACTGCTGCCTTTCCAT +
Preference number: 2 (lower is better)
Translates to: NHKCSQGKNKTRWIQRAGFATKC*RLLPFH
Trigger: ATGGAAAGGCAGCAGTCTTCAACATTTGGTTGCAAA...CCCAGCCCTCTGTATCCACCTGGTTTTGTTCTTTCCCTGTGAGCATTTGTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
3UTR-3UTR TCA 90 bp GCACCTGGCTTCAAGGAACACACATACAGTTATAGGCTGCTGCTTCTCAGAACAAAGAGACCAGTGTGTTaGAAGTCCTTTAGTCTAAGG +
Preference number: 2 (lower is better)
Translates to: APGFKEHTYSYRLLLLRTKRPVC*KSFSLR
Trigger: CCTTAGACTAAAGGACTTTCAACACACTGGTCTCTT...TGTTCTGAGAAGCAGCAGCCTATAACTGTATGTGTGTTCCTTGAAGCCAGGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
3UTR-3UTR TCA 90 bp TGGGTGGTCTGTCCTGTCCACTGTTACAAAGAGAGGACACAACAGCTGATGCCTTTCAGGGAGACTAAATaGCACATATGCTATTCACTT +
Preference number: 2 (lower is better)
Translates to: WVVCPVHCYKERTQQLMPFRETK*HICYSL
Trigger: AAGTGAATAGCATATGTGTCATTTAGTCTCCCTGAA...AGGCATCAGCTGTTGTGTCCTCTCTTTGTAACAGTGGACAGGACAGACCACCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
3UTR-3UTR GCA 90 bp AGAACAAAACCAGGTGGATACAGAGGGCTGGGAGGCAACGGAAGTTTCGTTTGGATGTGGATGGAGATTTaGAACCAAATGTTGAAGACT +
Preference number: 2 (lower is better)
Translates to: RTKPGGYRGLGGNGSFVWMWMEI*NQMLKT
Trigger: AGTCTTCAACATTTGGTTGCAAATCTCCATCCACAT...CCAAACGAAACTTCCGTTGCCTCCCAGCCCTCTGTATCCACCTGGTTTTGTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
3UTR-3UTR CCA 90 bp CACTCCTTTCTCAATGCAAACAGCTTACTTGCCAGGGAACACTGTGACTCATTCACTGAGCAGAAAACATaGGCTCAGAAGGACAAAGCA +
Preference number: 2 (lower is better)
Translates to: HSFLNANSLLAREHCDSFTEQKT*AQKDKA
Trigger: TGCTTTGTCCTTCTGAGCCCATGTTTTCTGCTCAGT...GAATGAGTCACAGTGTTCCCTGGCAAGTAAGCTGTTTGCATTGAGAAAGGAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
3UTR-3UTR CCA 90 bp CTCAGTCCACAGCAAGGAATAAAATGCAGCCACTGGTTACCAGTACTATGTACATCCTGGACACTGCTTTaGGAAAACTCTACAGCAGCA +
Preference number: 2 (lower is better)
Translates to: LSPQQGIKCSHWLPVLCTSWTLL*ENSTAA
Trigger: TGCTGCTGTAGAGTTTTCCCAAAGCAGTGTCCAGGA...TGTACATAGTACTGGTAACCAGTGGCTGCATTTTATTCCTTGCTGTGGACTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498165.6
3UTR-3UTR TCA 90 bp GACACAACAGCTGATGCCTGGAGGACCCTGAACAGGATCTTGAAAAGAATCTTCATTTTGGACACTGGATaGAAGAGTTGGGAAAACATG +
Preference number: 2 (lower is better)
Translates to: DTTADAWRTLNRILKRIFILDTG*KSWENM
Trigger: CATGTTTTCCCAACTCTTTCATCCAGTGTCCAAAAT...GAAGATTCTTTTCAAGATCCTGTTCAGGGTCCTCCAGGCATCAGCTGTTGTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
3UTR-3UTR GCA 90 bp TCCACAGAGCAGGATTTAGACGTTTTCATTACTACACGAAGAAGTCATCATTTGCACCAAATCCCAAGCTaGAGTAGCTGGGAACTCTGC +
Preference number: 2 (lower is better)
Translates to: STEQDLDVFITTRRSHHLHQIPS*SSWELC
Trigger: GCAGAGTTCCCAGCTACTGCAGCTTGGGATTTGGTG...CAAATGATGACTTCTTCGTGTAGTAATGAAAACGTCTAAATCCTGCTCTGTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498165.6
3UTR-3UTR CCA 90 bp ACTGAGCAGAAAACATGGGCTCAGAAGGACAAAGCATTCTCAGGACAGCTCTGTATTCCATGTCTGGGGTaGATGATCCTAATTACAACT +
Preference number: 2 (lower is better)
Translates to: TEQKTWAQKDKAFSGQLCIPCLG*MILITT
Trigger: AGTTGTAATTAGGATCATCCACCCCAGACATGGAAT...ACAGAGCTGTCCTGAGAATGCTTTGTCCTTCTGAGCCCATGTTTTCTGCTCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
3UTR-3UTR TCA 90 bp TCCCCTAACGTGGTTTCTTGGTCACGTAAGATGAAAAATCAGGGTATCTGTTGGAAGAGACCAGTGTGTTaGAAGTCCTTTAGTCTAAGG +
Preference number: 2 (lower is better)
Translates to: SPNVVSWSRKMKNQGICWKRPVC*KSFSLR
Trigger: CCTTAGACTAAAGGACTTTCAACACACTGGTCTCTT...CCAACAGATACCCTGATTTTTCATCTTACGTGACCAAGAAACCACGTTAGGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
3UTR-3UTR TCA 90 bp GCAGAAAACATGGGCTCAGAAGGACAAAGCATTCTCAGGACAGCTCTGTCTCTTTTCAGGGAGACTAAATaGCACATATGCTATTCACTT +
Preference number: 2 (lower is better)
Translates to: AENMGSEGQSILRTALSLFRETK*HICYSL
Trigger: AAGTGAATAGCATATGTGTCATTTAGTCTCCCTGAA...AAGAGACAGAGCTGTCCTGAGAATGCTTTGTCCTTCTGAGCCCATGTTTTCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
3UTR-3UTR GCA 90 bp TCCACAGAGCAGGATTTAGACGTTTTCATTACTACACGAAGAAGTCATCATTTGCCTGACTTACTGTGTTaGAACTGCCAGGTCCCTTTG +
Preference number: 2 (lower is better)
Translates to: STEQDLDVFITTRRSHHLPDLLC*NCQVPL
Trigger: CAAAGGGACCTGGCAGTTGCAACACAGTAAGTCAGG...CAAATGATGACTTCTTCGTGTAGTAATGAAAACGTCTAAATCCTGCTCTGTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498165.6
3UTR-3UTR CCA 90 bp TCCACAGAGCAGGATTTAGACGTTTTCATTACTACACGAAGAAGTCATCATTTGGGAGGCCAAGGCTGGTaGATTACAAGGTCAGGATAT +
Preference number: 2 (lower is better)
Translates to: STEQDLDVFITTRRSHHLGGQGW*ITRSGY
Trigger: ATATCCTGACCTTGTAATCCACCAGCCTTGGCCTCC...CAAATGATGACTTCTTCGTGTAGTAATGAAAACGTCTAAATCCTGCTCTGTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498165.6
3UTR CAA 90 bp CAGTGCAGTCAAAGAAAGTTAAGTGCTTGGAGAAATCAAGACAGATaGCAGCCCTCCACATCTACAAGGCAATTTCTTCACTCTCTCAAA +
Preference number: 2 (lower is better)
Translates to: QCSQRKLSAWRNQDR*QPSTSTRQFLHSLK
Trigger: TTTGAGAGAGTGAAGAAATTGCCTTGTAGATGTGGAGGGCTGCAATCTGTCTTGATTTCTCCAAGCACTTAACTTTCTTTGACTGCACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
3UTR CAA 90 bp AGATCTTGGAATGAATTTGAGACATATTTAGCTATGGCAGGGCTCTaGCTCATTATTCATATAAAAGAAAGGGATGGCCGGGTGCAGTGG +
Preference number: 2 (lower is better)
Translates to: RSWNEFETYLAMAGL*LIIHIKERDGRVQW
Trigger: CCACTGCACCCGGCCATCCCTTTCTTTTATATGAATAATGAGCAAGAGCCCTGCCATAGCTAAATATGTCTCAAATTCATTCCAAGATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498165.6
3UTR-3UTR CCA 90 bp TCCCCTAACGTGGTTTCTTGGTCACGTAAGATGAAAAATCAGGGTATCTGTTGGATTCCATGTCTGGGGTaGATGATCCTAATTACAACT +
Preference number: 2 (lower is better)
Translates to: SPNVVSWSRKMKNQGICWIPCLG*MILITT
Trigger: AGTTGTAATTAGGATCATCCACCCCAGACATGGAAT...CCAACAGATACCCTGATTTTTCATCTTACGTGACCAAGAAACCACGTTAGGGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
3UTR-3UTR CCA 90 bp CACTCCTTTCTCAATGCAAACAGCTTACTTGCCAGGGAACACTGTGACTCATTCCCTAACGTGGTTTCTTaGTCACGTAAGATGAAAAAT +
Preference number: 2 (lower is better)
Translates to: HSFLNANSLLAREHCDSFPNVVS*SRKMKN
Trigger: ATTTTTCATCTTACGTGACCAAGAAACCACGTTAGG...GAATGAGTCACAGTGTTCCCTGGCAAGTAAGCTGTTTGCATTGAGAAAGGAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
3UTR-3UTR CCA 90 bp GCACCTGGCTTCAAGGAACACACATACAGTTATAGGCTGCTGCTTCTCAGAACAAAATGGAAGGAATCATaGTATTGTGGCTTGCTTTTT +
Preference number: 2 (lower is better)
Translates to: APGFKEHTYSYRLLLLRTKWKES*YCGLLF
Trigger: AAAAAGCAAGCCACAATACCATGATTCCTTCCATTT...TGTTCTGAGAAGCAGCAGCCTATAACTGTATGTGTGTTCCTTGAAGCCAGGTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
3UTR-3UTR TCA 90 bp TCCACAGAGCAGGATTTAGACGTTTTCATTACTACACGAAGAAGTCATCATTTGTTTCGTTTGGCTGTTTaGGTCACCTTAGGCAAAGAG +
Preference number: 2 (lower is better)
Translates to: STEQDLDVFITTRRSHHLFRLAV*VTLGKE
Trigger: CTCTTTGCCTAAGGTGACTCAAACAGCCAAACGAAA...CAAATGATGACTTCTTCGTGTAGTAATGAAAACGTCTAAATCCTGCTCTGTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498165.6
3UTR-3UTR TCA 90 bp TCCACAGAGCAGGATTTAGACGTTTTCATTACTACACGAAGAAGTCATCATTTGCTTAGGCAAAGAGAGTaGCCCAGCATTTTCTCTAAA +
Preference number: 2 (lower is better)
Translates to: STEQDLDVFITTRRSHHLLRQRE*PSIFSK
Trigger: TTTAGAGAAAATGCTGGGTCACTCTCTTTGCCTAAG...CAAATGATGACTTCTTCGTGTAGTAATGAAAACGTCTAAATCCTGCTCTGTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498165.6
3UTR-3UTR GCA 90 bp TCCACAGAGCAGGATTTAGACGTTTTCATTACTACACGAAGAAGTCATCATTTGGAAATCAAGACAGATTaGAGCCCTCCACATCTACAA +
Preference number: 2 (lower is better)
Translates to: STEQDLDVFITTRRSHHLEIKTD*SPPHLQ
Trigger: TTGTAGATGTGGAGGGCTGCAATCTGTCTTGATTTC...CAAATGATGACTTCTTCGTGTAGTAATGAAAACGTCTAAATCCTGCTCTGTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498165.6
3UTR-3UTR GCA 90 bp TCTGTTGGTGAATTTAACAGCTGCCTATTACATATGGTAAGGACTAAGCAAAAGAAACCATTCCAAATCTaGTTCCAAGCTGCTACTGAG +
Preference number: 2 (lower is better)
Translates to: SVGEFNSCLLHMVRTKQKKPFQI*FQAATE
Trigger: CTCAGTAGCAGCTTGGAAGCAGATTTGGAATGGTTT...CTTTTGCTTAGTCCTTACCATATGTAATAGGCAGCTGTTAAATTCACCAACAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
3UTR-3UTR CCA 90 bp TCCACAGAGCAGGATTTAGACGTTTTCATTACTACACGAAGAAGTCATCATTTGAAAAATAAAGAAAGTTaGCTATGGGCTGTAAAGTGC +
Preference number: 2 (lower is better)
Translates to: STEQDLDVFITTRRSHHLKNKES*LWAVKC
Trigger: GCACTTTACAGCCCATAGCCAACTTTCTTTATTTTT...CAAATGATGACTTCTTCGTGTAGTAATGAAAACGTCTAAATCCTGCTCTGTGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498165.6
3UTR CCA 72 bp CCTACTGCTGCACCCTTGCACAGCTGCTGGCCCACTTaGGTGGAGGCTTCCAGTGGCACCCTCCACTGGGAC +
Preference number: 3 (lower is better)
Translates to: PTAAPLHSCWPT*VEASSGTLHWD
Trigger: GTCCCAGTGGAGGGTGCCACTGGAAGCCTCCACCCAAGTGGGCCAGCAGCTGTGCAAGGGTGCAGCAGTAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498165.6
3UTR GCA 72 bp TTCCTGACTTACTGTGTTGCAACTGCCAGGTCCCTTTaGTGCCTCCCCTGCAGGCCTGCAGGCCACGGGGCG +
Preference number: 3 (lower is better)
Translates to: FLTYCVATARSL*CLPCRPAGHGA
Trigger: CGCCCCGTGGCCTGCAGGCCTGCAGGGGAGGCAGCAAAGGGACCTGGCAGTTGCAACACAGTAAGTCAGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
3UTR CCA 72 bp TTTCACCAGCCTACTGCTGCACCCTTGCACAGCTGCTaGCCCACTTGGGTGGAGGCTTCCAGTGGCACCCTC +
Preference number: 3 (lower is better)
Translates to: FHQPTAAPLHSC*PTWVEASSGTL
Trigger: GAGGGTGCCACTGGAAGCCTCCACCCAAGTGGGCCAGCAGCTGTGCAAGGGTGCAGCAGTAGGCTGGTGAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498165.6
3UTR GCA 72 bp AGGCAGGAGAATGGTGTGAACCTGGGAGGCGGAGCTTaGAGTGACCTGACATTGCGCCACGGCATTCCAGCC +
Preference number: 3 (lower is better)
Translates to: RQENGVNLGGGA*SDLTLRHGIPA
Trigger: GGCTGGAATGCCGTGGCGCAATGTCAGGTCACTGCAAGCTCCGCCTCCCAGGTTCACACCATTCTCCTGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498165.6
3UTR GCA 72 bp TCTCCTGAAGTGGCAGCGAGTAACCCGGGCAGGCTTTaGTCTGGGTCACTCAGCCCTCTCTCCACCACAATC +
Preference number: 3 (lower is better)
Translates to: SPEVAASNPGRL*SGSLSPLSTTI
Trigger: GATTGTGGTGGAGAGAGGGCTGAGTGACCCAGAGCAAAGCCTGCCCGGGTTACTCGCTGCCACTTCAGGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498165.6
3UTR TCA 72 bp GGAGAGGGCAGGGTTCCACGGCGAGGAGGTGGCCGGTaGATGTGGCATATGGGAAGCTATAACCACAAATGC +
Preference number: 3 (lower is better)
Translates to: GEGRVPRRGGGR*MWHMGSYNHKC
Trigger: GCATTTGTGGTTATAGCTTCCCATATGCCACATTCACCGGCCACCTCCTCGCCGTGGAACCCTGCCCTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
3UTR CCA 72 bp CAGGTGACGCAGTGGCCTGTCTCCTGCAGCACTGGGTaGTCTGTCCTGTCCACTGTTACAAAGAGAGGACAC +
Preference number: 3 (lower is better)
Translates to: QVTQWPVSCSTG*SVLSTVTKRGH
Trigger: GTGTCCTCTCTTTGTAACAGTGGACAGGACAGACCACCCAGTGCTGCAGGAGACAGGCCACTGCGTCACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
3UTR CCA 72 bp GTGGAGCAGCAGCAGAGCACTGCATTAATGGAGACCTaGGCCTGGCATCGTGCTGGGGTCTCAGAAGCACAT +
Preference number: 3 (lower is better)
Translates to: VEQQQSTALMET*AWHRAGVSEAH
Trigger: ATGTGCTTCTGAGACCCCAGCACGATGCCAGGCCCAGGTCTCCATTAATGCAGTGCTCTGCTGCTGCTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498165.6
3UTR GCA 72 bp GAGCACTGCATTAATGGAGACCTGGGCCTGGCATCGTaGTGGGGTCTCAGAAGCACATGGCCATTCCTGTCT +
Preference number: 3 (lower is better)
Translates to: EHCINGDLGLAS*WGLRSTWPFLS
Trigger: AGACAGGAATGGCCATGTGCTTCTGAGACCCCAGCACGATGCCAGGCCCAGGTCTCCATTAATGCAGTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498165.6
3UTR CCA 72 bp CACTGCATTAATGGAGACCTGGGCCTGGCATCGTGCTaGGGTCTCAGAAGCACATGGCCATTCCTGTCTTCA +
Preference number: 3 (lower is better)
Translates to: HCINGDLGLASC*GLRSTWPFLSS
Trigger: TGAAGACAGGAATGGCCATGTGCTTCTGAGACCCCAGCACGATGCCAGGCCCAGGTCTCCATTAATGCAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498165.6
3UTR CCA 72 bp CCCAAGAAGGCAGTGATGGCGCCTGAGTGCTCACCATaGATACATTCACTCAGACACAGTCACTGCCTGGCA +
Preference number: 3 (lower is better)
Translates to: PKKAVMAPECSP*IHSLRHSHCLA
Trigger: TGCCAGGCAGTGACTGTGTCTGAGTGAATGTATCCATGGTGAGCACTCAGGCGCCATCACTGCCTTCTTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498165.6
3UTR-3UTR CAA 90 bp AGAACAAAACCAGGTGGATACAGAGGGCTGGGAGGCAACGGAAGTTTCGTTTGGGGACAGCTCTGTCTCTaGGCAGAGGGTGTTGCCACA +
Preference number: 3 (lower is better)
Translates to: RTKPGGYRGLGGNGSFVWGQLCL*AEGVAT
Trigger: TGTGGCAACACCCTCTGCCAAGAGACAGAGCTGTCC...CCAAACGAAACTTCCGTTGCCTCCCAGCCCTCTGTATCCACCTGGTTTTGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
3UTR-3UTR CAA 90 bp AACCACAAATGCTCACAGGGAAAGAACAAAACCAGGTGGATACAGAGGGCTGGGAGGCCACGGGGCGGTTaGTATTTGCCTGGGGAAAGC +
Preference number: 3 (lower is better)
Translates to: NHKCSQGKNKTRWIQRAGRPRGG*YLPGES
Trigger: GCTTTCCCCAGGCAAATACAAACCGCCCCGTGGCCT...CCCAGCCCTCTGTATCCACCTGGTTTTGTTCTTTCCCTGTGAGCATTTGTGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
3UTR GCA 72 bp GCAAGGGAAGAGGGTTATCTCTGCTGTGCAGGCAGTTaGCACTGGTCTCTCATTCTCTCTGCTTCTCGCAGT +
Preference number: 3 (lower is better)
Translates to: AREEGYLCCAGS*HWSLILSASRS
Trigger: ACTGCGAGAAGCAGAGAGAATGAGAGACCAGTGGCAACTGCCTGCACAGCAGAGATAACCCTCTTCCCTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
3UTR GCA 72 bp TCACTCAGCCCTCTCTCCACCACAATCTGCCACCAGTaGCCTTACAGTAATCTGCTTGTGCTCAATGTCCTC +
Preference number: 3 (lower is better)
Translates to: SLSPLSTTICHQ*PYSNLLVLNVL
Trigger: GAGGACATTGAGCACAAGCAGATTACTGTAAGGGCACTGGTGGCAGATTGTGGTGGAGAGAGGGCTGAGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498165.6
3UTR CCA 72 bp TTCCACGGCGAGGAGGTGGCCGGTGAATGTGGCATATaGGAAGCTATAACCACAAATGCTCACAGGGAAAGA +
Preference number: 3 (lower is better)
Translates to: FHGEEVAGECGI*EAITTNAHRER
Trigger: TCTTTCCCTGTGAGCATTTGTGGTTATAGCTTCCCATATGCCACATTCACCGGCCACCTCCTCGCCGTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
3UTR TCA 72 bp AGGGCTGGGAGGCAACGGAAGTTTCGTTTGGCTGTTTaGGTCACCTTAGGCAAAGAGAGTGACCCAGCATTT +
Preference number: 3 (lower is better)
Translates to: RAGRQRKFRLAV*VTLGKESDPAF
Trigger: AAATGCTGGGTCACTCTCTTTGCCTAAGGTGACTCAAACAGCCAAACGAAACTTCCGTTGCCTCCCAGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
3UTR CCA 72 bp CCAGTAGTTTCCCACCAAATCCCAAGCTGCAGTAGCTaGGAACTCTGCACCTGGCTTCAAGGAACACACATA +
Preference number: 3 (lower is better)
Translates to: PVVSHQIPSCSS*ELCTWLQGTHI
Trigger: TATGTGTGTTCCTTGAAGCCAGGTGCAGAGTTCCCAGCTACTGCAGCTTGGGATTTGGTGGGAAACTACTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
3UTR-3UTR CAA 90 bp AAGAAAGTTAAGTGCTTGGAGAAATCAAGACAGATTGCAGCCCTCCACATCTACTCTTGGCAGAGGGTGTaGCCACATCAGCCCCTGACC +
Preference number: 3 (lower is better)
Translates to: KKVKCLEKSRQIAALHIYSWQRV*PHQPLT
Trigger: GGTCAGGGGCTGATGTGGCAACACCCTCTGCCAAGA...GTAGATGTGGAGGGCTGCAATCTGTCTTGATTTCTCCAAGCACTTAACTTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
3UTR-3UTR CAA 90 bp CACTCCTTTCTCAATGCAAACAGCTTACTTGCCAGGGAACACTGTGACTCATTCCTGCTGTGCAGGCAGTaGCCACTGGTCTCTCATTCT +
Preference number: 3 (lower is better)
Translates to: HSFLNANSLLAREHCDSFLLCRQ*PLVSHS
Trigger: AGAATGAGAGACCAGTGGCAACTGCCTGCACAGCAG...GAATGAGTCACAGTGTTCCCTGGCAAGTAAGCTGTTTGCATTGAGAAAGGAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
3UTR TCA 72 bp GTCCTGTCCACTGTTACAAAGAGAGGACACAACAGCTaGTGCCTGGAGGACCCTGAACAGGATCTTGAAAAG +
Preference number: 3 (lower is better)
Translates to: VLSTVTKRGHNS*CLEDPEQDLEK
Trigger: CTTTTCAAGATCCTGTTCAGGGTCCTCCAGGCATCAGCTGTTGTGTCCTCTCTTTGTAACAGTGGACAGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
3UTR CCA 72 bp AACCACAAATGCTCACAGGGAAAGAACAAAACCAGGTaGATACAGAGGGCTGGGAGGCAACGGAAGTTTCGT +
Preference number: 3 (lower is better)
Translates to: NHKCSQGKNKTR*IQRAGRQRKFR
Trigger: ACGAAACTTCCGTTGCCTCCCAGCCCTCTGTATCCACCTGGTTTTGTTCTTTCCCTGTGAGCATTTGTGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
3UTR CCA 72 bp TTCGAACTCGAGCTAGCTAGGGAGTCTAGGAAGCCTTaGGTGACAATTCCAAAGCTTTGGCAGTGCTGCTTA +
Preference number: 3 (lower is better)
Translates to: FELELARESRKP*VTIPKLWQCCL
Trigger: TAAGCAGCACTGCCAAAGCTTTGGAATTGTCACCCAAGGCTTCCTAGACTCCCTAGCTAGCTCGAGTTCGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498165.6
3UTR-3UTR CAA 90 bp AGAACAAAACCAGGTGGATACAGAGGGCTGGGAGGCAACGGAAGTTTCGTTTGGACCCTGAACAGGATCTaGAAAAGAATCTTCAGGGAG +
Preference number: 3 (lower is better)
Translates to: RTKPGGYRGLGGNGSFVWTLNRI*KRIFRE
Trigger: CTCCCTGAAGATTCTTTTCAAGATCCTGTTCAGGGT...CCAAACGAAACTTCCGTTGCCTCCCAGCCCTCTGTATCCACCTGGTTTTGTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
3UTR TCA 72 bp GGCCCACTTATCAATATGGGTTCACGCTTGAATTCCTaGCTTACTGTGTTGCAACTGCCAGGTCCCTTTGCT +
Preference number: 3 (lower is better)
Translates to: GPLINMGSRLNS*LTVLQLPGPFA
Trigger: AGCAAAGGGACCTGGCAGTTGCAACACAGTAAGTCAGGAATTCAAGCGTGAACCCATATTGATAAGTGGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
3UTR GCA 72 bp TTGCCTGGGGAAAGCTCCCTGATGTGGATGGAGATTTaGAACCAAATGTTGAAGACTGCTGCCTTTCCATTG +
Preference number: 3 (lower is better)
Translates to: LPGESSLMWMEI*NQMLKTAAFPL
Trigger: CAATGGAAAGGCAGCAGTCTTCAACATTTGGTTGCAAATCTCCATCCACATCAGGGAGCTTTCCCCAGGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
3UTR GCA 72 bp TTGGAAGCTTCATGGTATCAACTGCCCCCTGCCCTTTaGAATCCGCCACCTAGCCTAAGAGATCTTACTTTT +
Preference number: 3 (lower is better)
Translates to: LEASWYQLPPAL*NPPPSLRDLTF
Trigger: AAAAGTAAGATCTCTTAGGCTAGGTGGCGGATTGCAAAGGGCAGGGGGCAGTTGATACCATGAAGCTTCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498165.6
3UTR GCA 72 bp CCACCACAATCTGCCACCAGTGCCCTTACAGTAATCTaGTTGTGCTCAATGTCCTCGGAGGTTTTTGAGATT +
Preference number: 3 (lower is better)
Translates to: PPQSATSALTVI*LCSMSSEVFEI
Trigger: AATCTCAAAAACCTCCGAGGACATTGAGCACAAGCAGATTACTGTAAGGGCACTGGTGGCAGATTGTGGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498165.6
3UTR CCA 72 bp CAAATCTGCTTCCAAGCTGCTACTGAGCAGAAAACATaGGCTCAGAAGGACAAAGCATTCTCAGGACAGCTC +
Preference number: 3 (lower is better)
Translates to: QICFQAATEQKT*AQKDKAFSGQL
Trigger: GAGCTGTCCTGAGAATGCTTTGTCCTTCTGAGCCCATGTTTTCTGCTCAGTAGCAGCTTGGAAGCAGATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
3UTR-3UTR CAA 90 bp GCACCTGGCTTCAAGGAACACACATACAGTTATAGGCTGCTGCTTCTCAGAACAATGCAAACAGCTTACTaGCCAGGGAACACTGTGACT +
Preference number: 3 (lower is better)
Translates to: APGFKEHTYSYRLLLLRTMQTAY*PGNTVT
Trigger: AGTCACAGTGTTCCCTGGCAAGTAAGCTGTTTGCAT...TGTTCTGAGAAGCAGCAGCCTATAACTGTATGTGTGTTCCTTGAAGCCAGGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
3UTR TCA 72 bp TGTAAAGTGCTGACACCATTGGTGCTGATTTCAGTTTaGTGGTGGGTGGGGGCAACTCTTAGGAGTCAGAAT +
Preference number: 3 (lower is better)
Translates to: CKVLTPLVLISV*WWVGATLRSQN
Trigger: ATTCTGACTCCTAAGAGTTGCCCCCACCCACCATCAAACTGAAATCAGCACCAATGGTGTCAGCACTTTACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498165.6
3UTR GCA 72 bp CTGGCTTCAAGGAACACACATACAGTTATAGGCTGCTaGTTCTCAGAACACTGCCTGACACTTGAAAACCAC +
Preference number: 3 (lower is better)
Translates to: LASRNTHTVIGC*FSEHCLTLENH
Trigger: GTGGTTTTCAAGTGTCAGGCAGTGTTCTGAGAAGCAGCAGCCTATAACTGTATGTGTGTTCCTTGAAGCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
3UTR GCA 72 bp CACCTGGCTTCAAGGAACACACATACAGTTATAGGCTaGTGCTTCTCAGAACACTGCCTGACACTTGAAAAC +
Preference number: 3 (lower is better)
Translates to: HLASRNTHTVIG*CFSEHCLTLEN
Trigger: GTTTTCAAGTGTCAGGCAGTGTTCTGAGAAGCAGCAGCCTATAACTGTATGTGTGTTCCTTGAAGCCAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
3UTR GCA 72 bp CAATCTGCCACCAGTGCCCTTACAGTAATCTGCTTGTaGTCAATGTCCTCGGAGGTTTTTGAGATTAACTTG +
Preference number: 3 (lower is better)
Translates to: QSATSALTVICL*SMSSEVFEINL
Trigger: CAAGTTAATCTCAAAAACCTCCGAGGACATTGAGCACAAGCAGATTACTGTAAGGGCACTGGTGGCAGATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498165.6
3UTR-3UTR CAA 90 bp AACCACAAATGCTCACAGGGAAAGAACAAAACCAGGTGGATACAGAGGGCTGGGTTCCTTCATCTACTGTaGAAAATGGAAGGAATCATG +
Preference number: 3 (lower is better)
Translates to: NHKCSQGKNKTRWIQRAGFLHLL*KMEGIM
Trigger: CATGATTCCTTCCATTTTCAACAGTAGATGAAGGAA...CCCAGCCCTCTGTATCCACCTGGTTTTGTTCTTTCCCTGTGAGCATTTGTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
3UTR-3UTR CAA 90 bp TCCACAGAGCAGGATTTAGACGTTTTCATTACTACACGAAGAAGTCATCATTTGGCACCATGGGGACTATaGGCAATTCGAACTCGAGCT +
Preference number: 3 (lower is better)
Translates to: STEQDLDVFITTRRSHHLAPWGL*AIRTRA
Trigger: AGCTCGAGTTCGAATTGCCAATAGTCCCCATGGTGC...CAAATGATGACTTCTTCGTGTAGTAATGAAAACGTCTAAATCCTGCTCTGTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498165.6
3UTR TCA 72 bp TGTCTGGGTATCCTAAAGGGGTTTTTCCCTGATACTTaGCTATTACATCCGCCTTTGCTTCTGCATGAACAC +
Preference number: 3 (lower is better)
Translates to: CLGILKGFFPDT*LLHPPLLLHEH
Trigger: GTGTTCATGCAGAAGCAAAGGCGGATGTAATAGTCAAGTATCAGGGAAAAACCCCTTTAGGATACCCAGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498165.6
3UTR GCA 72 bp GATGTGGATGGAGATTTGCAACCAAATGTTGAAGACTaGTGCCTTTCCATTGTCAAGGAGAAGCTTATCCCA +
Preference number: 3 (lower is better)
Translates to: DVDGDLQPNVED*CLSIVKEKLIP
Trigger: TGGGATAAGCTTCTCCTTGACAATGGAAAGGCAGCAGTCTTCAACATTTGGTTGCAAATCTCCATCCACATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
3UTR-3UTR CAA 90 bp GCACCTGGCTTCAAGGAACACACATACAGTTATAGGCTGCTGCTTCTCAGAACATTCCTTCATCTACTGTaGAAAATGGAAGGAATCATG +
Preference number: 3 (lower is better)
Translates to: APGFKEHTYSYRLLLLRTFLHLL*KMEGIM
Trigger: CATGATTCCTTCCATTTTCAACAGTAGATGAAGGAA...TGTTCTGAGAAGCAGCAGCCTATAACTGTATGTGTGTTCCTTGAAGCCAGGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
3UTR GCA 72 bp TGTGAACCTCAATTAGAGAGAAAGTTATGTAACTCGTaGACTCAGCACCATCTGTTAAGAAATTCTGCAGGG +
Preference number: 3 (lower is better)
Translates to: CEPQLERKLCNS*TQHHLLRNSAG
Trigger: CCCTGCAGAATTTCTTAACAGATGGTGCTGAGTGCACGAGTTACATAACTTTCTCTCTAATTGAGGTTCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498165.6
3UTR-3UTR CAA 90 bp CAAAATAGTAAACCATTCCAAATCTGCTTCCAAGCTGCTACTGAGCAGAAAACAACCCTGAACAGGATCTaGAAAAGAATCTTCAGGGAG +
Preference number: 3 (lower is better)
Translates to: QNSKPFQICFQAATEQKTTLNRI*KRIFRE
Trigger: CTCCCTGAAGATTCTTTTCAAGATCCTGTTCAGGGT...TGTTTTCTGCTCAGTAGCAGCTTGGAAGCAGATTTGGAATGGTTTACTATTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
3UTR TCA 72 bp TCATTTCCCCTAACGTGGTTTCTTGGTCACGTAAGATaGAAAATCAGGGTATCTGTTGGTGAATTTAACAGC +
Preference number: 3 (lower is better)
Translates to: SFPLTWFLGHVR*KIRVSVGEFNS
Trigger: GCTGTTAAATTCACCAACAGATACCCTGATTTTTCATCTTACGTGACCAAGAAACCACGTTAGGGGAAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
3UTR GCA 72 bp GGTTTTTCCCTGATACTTGACTATTACATCCGCCTTTaGTTCTGCATGAACACGTTTTACATCGTGAATTAT +
Preference number: 3 (lower is better)
Translates to: GFSLILDYYIRL*FCMNTFYIVNY
Trigger: ATAATTCACGATGTAAAACGTGTTCATGCAGAAGCAAAGGCGGATGTAATAGTCAAGTATCAGGGAAAAACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498165.6
3UTR CCA 72 bp TGTGCTCAATGTCCTCGGAGGTTTTTGAGATTAACTTaGATTTGGCAAATGTTAGGTGGGATTTTGTGTTTA +
Preference number: 3 (lower is better)
Translates to: CAQCPRRFLRLT*IWQMLGGILCL
Trigger: TAAACACAAAATCCCACCTAACATTTGCCAAATCCAAGTTAATCTCAAAAACCTCCGAGGACATTGAGCACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498165.6
3UTR GCA 72 bp TCCCTGATACTTGACTATTACATCCGCCTTTGCTTCTaGATGAACACGTTTTACATCGTGAATTATCTAATT +
Preference number: 3 (lower is better)
Translates to: SLILDYYIRLCF*MNTFYIVNYLI
Trigger: AATTAGATAATTCACGATGTAAAACGTGTTCATGCAGAAGCAAAGGCGGATGTAATAGTCAAGTATCAGGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498165.6
3UTR CCA 72 bp GGAAAACAGTGGACTCAATTTCCTAGAATCCAACAGTaGAATCAATTTCCTAGAATCACTTCAGATTCAATT +
Preference number: 3 (lower is better)
Translates to: GKQWTQFPRIQQ*NQFPRITSDSI
Trigger: AATTGAATCTGAAGTGATTCTAGGAAATTGATTCCACTGTTGGATTCTAGGAAATTGAGTCCACTGTTTTCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498165.6
3UTR CAA 72 bp GCCTACTGCTGCACCCTTGCACAGCTGCTGGCCCACTaGGGTGGAGGCTTCCAGTGGCACCCTCCACTGGGA +
Preference number: 4 (lower is better)
Translates to: AYCCTLAQLLAH*GGGFQWHPPLG
Trigger: TCCCAGTGGAGGGTGCCACTGGAAGCCTCCACCCAAGTGGGCCAGCAGCTGTGCAAGGGTGCAGCAGTAGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR TCA 90 bp CTACTGCTGCACCCTTGCACAGCTGCTGGCCCACTTGGGTGGAGGCTTCCAGTGCTGACCACTCACAGGTaGCGCAGTGGCCTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: LLLHPCTAAGPLGWRLPVLTTHR*RSGLSP
Trigger: AGGAGACAGGCCACTGCGTCACCTGTGAGTGGTCAG...CACTGGAAGCCTCCACCCAAGTGGGCCAGCAGCTGTGCAAGGGTGCAGCAGTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498165.6
3UTR CAA 72 bp GGACAACCTGGCTTTCACCAGCCTACTGCTGCACCCTaGCACAGCTGCTGGCCCACTTGGGTGGAGGCTTCC +
Preference number: 4 (lower is better)
Translates to: GQPGFHQPTAAP*HSCWPTWVEAS
Trigger: GGAAGCCTCCACCCAAGTGGGCCAGCAGCTGTGCAAGGGTGCAGCAGTAGGCTGGTGAAAGCCAGGTTGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR CCA 90 bp CTACTGCTGCACCCTTGCACAGCTGCTGGCCCACTTGGGTGGAGGCTTCCAGTGTCCTGCAGCACTGGGTaGTCTGTCCTGTCCACTGTT +
Preference number: 4 (lower is better)
Translates to: LLLHPCTAAGPLGWRLPVSCSTG*SVLSTV
Trigger: AACAGTGGACAGGACAGACCACCCAGTGCTGCAGGA...CACTGGAAGCCTCCACCCAAGTGGGCCAGCAGCTGTGCAAGGGTGCAGCAGTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR TCA 90 bp CTACTGCTGCACCCTTGCACAGCTGCTGGCCCACTTGGGTGGAGGCTTCCAGTGTCCATAGAGCCAAGCTaGTGCACAGCAGGAAAAGCG +
Preference number: 4 (lower is better)
Translates to: LLLHPCTAAGPLGWRLPVSIEPS*CTAGKA
Trigger: CGCTTTTCCTGCTGTGCATCAGCTTGGCTCTATGGA...CACTGGAAGCCTCCACCCAAGTGGGCCAGCAGCTGTGCAAGGGTGCAGCAGTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR TCA 90 bp CTACTGCTGCACCCTTGCACAGCTGCTGGCCCACTTGGGTGGAGGCTTCCAGTGGCCATGCATCTTGAGTaGCCGTGCACTGCCATATAC +
Preference number: 4 (lower is better)
Translates to: LLLHPCTAAGPLGWRLPVAMHLE*PCTAIY
Trigger: GTATATGGCAGTGCACGGTCACTCAAGATGCATGGC...CACTGGAAGCCTCCACCCAAGTGGGCCAGCAGCTGTGCAAGGGTGCAGCAGTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR GCA 90 bp AGGGAAGAGGGTTATCTCTGCTGTGCAGGCAGTTGCCACTGGTCTCTCATTCTCGCCAGGTCCCTTTGCTaGCTCCCCTGCAGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: REEGYLCCAGSCHWSLILARSLC*LPCRPA
Trigger: TGCAGGCCTGCAGGGGAGGCAGCAAAGGGACCTGGC...GAGAATGAGAGACCAGTGGCAACTGCCTGCACAGCAGAGATAACCCTCTTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR CCA 90 bp CTACTGCTGCACCCTTGCACAGCTGCTGGCCCACTTGGGTGGAGGCTTCCAGTGCACATCCCCAACAGCTaGAAAAGGGCTAGGGAGAGA +
Preference number: 4 (lower is better)
Translates to: LLLHPCTAAGPLGWRLPVHIPNS*KRARER
Trigger: TCTCTCCCTAGCCCTTTTCCAGCTGTTGGGGATGTG...CACTGGAAGCCTCCACCCAAGTGGGCCAGCAGCTGTGCAAGGGTGCAGCAGTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR TCA 90 bp CTACTGCTGCACCCTTGCACAGCTGCTGGCCCACTTGGGTGGAGGCTTCCAGTGTCAAAGCGACCCAAATaGCACGCCATGCATCTTGAG +
Preference number: 4 (lower is better)
Translates to: LLLHPCTAAGPLGWRLPVSKRPK*HAMHLE
Trigger: CTCAAGATGCATGGCGTGTCATTTGGGTCGCTTTGA...CACTGGAAGCCTCCACCCAAGTGGGCCAGCAGCTGTGCAAGGGTGCAGCAGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR GCA 90 bp GACACAACAGCTGATGCCTGGAGGACCCTGAACAGGATCTTGAAAAGAATCTTCCCTCCCCTGCAGGCCTaGAGGCCACGGGGCGGTTTG +
Preference number: 4 (lower is better)
Translates to: DTTADAWRTLNRILKRIFPPLQA*RPRGGL
Trigger: CAAACCGCCCCGTGGCCTGCAGGCCTGCAGGGGAGG...GAAGATTCTTTTCAAGATCCTGTTCAGGGTCCTCCAGGCATCAGCTGTTGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR GCA 90 bp CTACTGCTGCACCCTTGCACAGCTGCTGGCCCACTTGGGTGGAGGCTTCCAGTGCTTCATGGTATCAACTaGCCCCTGCCCTTTGCAATC +
Preference number: 4 (lower is better)
Translates to: LLLHPCTAAGPLGWRLPVLHGIN*PLPFAI
Trigger: GATTGCAAAGGGCAGGGGGCAGTTGATACCATGAAG...CACTGGAAGCCTCCACCCAAGTGGGCCAGCAGCTGTGCAAGGGTGCAGCAGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR CCA 90 bp ACAGAGGGCTGGGAGGCAACGGAAGTTTCGTTTGGCTGTTTGAGTCACCTTAGGCTCAGCCGCCTGGCCTaGCCATCTCAGCACTGCTCA +
Preference number: 4 (lower is better)
Translates to: TEGWEATEVSFGCLSHLRLSRLA*PSQHCS
Trigger: TGAGCAGTGCTGAGATGGCCAGGCCAGGCGGCTGAG...CCTAAGGTGACTCAAACAGCCAAACGAAACTTCCGTTGCCTCCCAGCCCTCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR CCA 90 bp CTACTGCTGCACCCTTGCACAGCTGCTGGCCCACTTGGGTGGAGGCTTCCAGTGCTATTGGAAGCTTCATaGTATCAACTGCCCCCTGCC +
Preference number: 4 (lower is better)
Translates to: LLLHPCTAAGPLGWRLPVLLEAS*YQLPPA
Trigger: GGCAGGGGGCAGTTGATACCATGAAGCTTCCAATAG...CACTGGAAGCCTCCACCCAAGTGGGCCAGCAGCTGTGCAAGGGTGCAGCAGTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR CCA 90 bp AGGAAGCAAGGGAAGAGGGTTATCTCTGCTGTGCAGGCAGTTGCCACTGGTCTCGGGCAGGCTTTGCTCTaGGTCACTCAGCCCTCTCTC +
Preference number: 4 (lower is better)
Translates to: RKQGKRVISAVQAVATGLGQALL*VTQPSL
Trigger: GAGAGAGGGCTGAGTGACCCAGAGCAAAGCCTGCCC...GAGACCAGTGGCAACTGCCTGCACAGCAGAGATAACCCTCTTCCCTTGCTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR TCA 90 bp GACTATTGGCAATTCGAACTCGAGCTAGCTAGGGAGTCTAGGAAGCCTTGGGTGGCCCCAAGAAGGCAGTaGTGGCGCCTGAGTGCTCAC +
Preference number: 4 (lower is better)
Translates to: DYWQFELELARESRKPWVAPRRQ*WRLSAH
Trigger: GTGAGCACTCAGGCGCCATCACTGCCTTCTTGGGGC...CACCCAAGGCTTCCTAGACTCCCTAGCTAGCTCGAGTTCGAATTGCCAATAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR TCA 90 bp CTACTGCTGCACCCTTGCACAGCTGCTGGCCCACTTGGGTGGAGGCTTCCAGTGTACACTCAGGAACACTaGAGATACTCAGTTCTGGGC +
Preference number: 4 (lower is better)
Translates to: LLLHPCTAAGPLGWRLPVYTQEH*RYSVLG
Trigger: GCCCAGAACTGAGTATCTTCAGTGTTCCTGAGTGTA...CACTGGAAGCCTCCACCCAAGTGGGCCAGCAGCTGTGCAAGGGTGCAGCAGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR GCA 90 bp AACCACAAATGCTCACAGGGAAAGAACAAAACCAGGTGGATACAGAGGGCTGGGGCCAGGTCCCTTTGCTaGCTCCCCTGCAGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: NHKCSQGKNKTRWIQRAGARSLC*LPCRPA
Trigger: TGCAGGCCTGCAGGGGAGGCAGCAAAGGGACCTGGC...CCCAGCCCTCTGTATCCACCTGGTTTTGTTCTTTCCCTGTGAGCATTTGTGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR CCA 90 bp AGGAAGCAAGGGAAGAGGGTTATCTCTGCTGTGCAGGCAGTTGCCACTGGTCTCATGGCCAGGATTCCCTaGACCCTCCAGGAGCCATTG +
Preference number: 4 (lower is better)
Translates to: RKQGKRVISAVQAVATGLMARIP*TLQEPL
Trigger: CAATGGCTCCTGGAGGGTCCAGGGAATCCTGGCCAT...GAGACCAGTGGCAACTGCCTGCACAGCAGAGATAACCCTCTTCCCTTGCTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
CDS-3UTR CCA 90 bp GACTATTGGCAATTCGAACTCGAGCTAGCTAGGGAGTCTAGGAAGCCTTGGGTGCCAGGGACCGAGACATaGCCAGGATTCCCTGGACCC +
Preference number: 4 (lower is better)
Translates to: DYWQFELELARESRKPWVPGTET*PGFPGP
Trigger: GGGTCCAGGGAATCCTGGCCATGTCTCGGTCCCTGG...CACCCAAGGCTTCCTAGACTCCCTAGCTAGCTCGAGTTCGAATTGCCAATAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR TCA 90 bp AGGAAGCAAGGGAAGAGGGTTATCTCTGCTGTGCAGGCAGTTGCCACTGGTCTCAGAGGACACAACAGCTaGTGCCTGGAGGACCCTGAA +
Preference number: 4 (lower is better)
Translates to: RKQGKRVISAVQAVATGLRGHNS*CLEDPE
Trigger: TTCAGGGTCCTCCAGGCATCAGCTGTTGTGTCCTCT...GAGACCAGTGGCAACTGCCTGCACAGCAGAGATAACCCTCTTCCCTTGCTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
CDS-3UTR TCA 90 bp CTACTGCTGCACCCTTGCACAGCTGCTGGCCCACTTGGGTGGAGGCTTCCAGTGTGCCAGGGAACACTGTaGCTCATTCAGTATCATTTC +
Preference number: 4 (lower is better)
Translates to: LLLHPCTAAGPLGWRLPVCQGTL*LIQYHF
Trigger: GAAATGATACTGAATGAGTCACAGTGTTCCCTGGCA...CACTGGAAGCCTCCACCCAAGTGGGCCAGCAGCTGTGCAAGGGTGCAGCAGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR TCA 90 bp CTACTGCTGCACCCTTGCACAGCTGCTGGCCCACTTGGGTGGAGGCTTCCAGTGTTTCGTTTGGCTGTTTaGGTCACCTTAGGCAAAGAG +
Preference number: 4 (lower is better)
Translates to: LLLHPCTAAGPLGWRLPVFRLAV*VTLGKE
Trigger: CTCTTTGCCTAAGGTGACTCAAACAGCCAAACGAAA...CACTGGAAGCCTCCACCCAAGTGGGCCAGCAGCTGTGCAAGGGTGCAGCAGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR GCA 90 bp CTACTGCTGCACCCTTGCACAGCTGCTGGCCCACTTGGGTGGAGGCTTCCAGTGTGCTTCTCAGAACACTaGCTGACACTTGAAAACCAC +
Preference number: 4 (lower is better)
Translates to: LLLHPCTAAGPLGWRLPVCFSEH*LTLENH
Trigger: GTGGTTTTCAAGTGTCAGGCAGTGTTCTGAGAAGCA...CACTGGAAGCCTCCACCCAAGTGGGCCAGCAGCTGTGCAAGGGTGCAGCAGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR CCA 90 bp AGGGAAGAGGGTTATCTCTGCTGTGCAGGCAGTTGCCACTGGTCTCTCATTCTCTCCACGGCGAGGAGGTaGCCGGTGAATGTGGCATAT +
Preference number: 4 (lower is better)
Translates to: REEGYLCCAGSCHWSLILSTARR*PVNVAY
Trigger: ATATGCCACATTCACCGGCCACCTCCTCGCCGTGGA...GAGAATGAGAGACCAGTGGCAACTGCCTGCACAGCAGAGATAACCCTCTTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR CCA 90 bp GACTATTGGCAATTCGAACTCGAGCTAGCTAGGGAGTCTAGGAAGCCTTGGGTGATGGAGACCTGGGCCTaGCATCGTGCTGGGGTCTCA +
Preference number: 4 (lower is better)
Translates to: DYWQFELELARESRKPWVMETWA*HRAGVS
Trigger: TGAGACCCCAGCACGATGCCAGGCCCAGGTCTCCAT...CACCCAAGGCTTCCTAGACTCCCTAGCTAGCTCGAGTTCGAATTGCCAATAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR CCA 90 bp TGGGTGGTCTGTCCTGTCCACTGTTACAAAGAGAGGACACAACAGCTGATGCCTGCTGAGGCAGGAGAATaGTGTGAACCTGGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: WVVCPVHCYKERTQQLMPAEAGE*CEPGRR
Trigger: CCGCCTCCCAGGTTCACACCATTCTCCTGCCTCAGC...AGGCATCAGCTGTTGTGTCCTCTCTTTGTAACAGTGGACAGGACAGACCACCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR TCA 90 bp TGGGTGGTCTGTCCTGTCCACTGTTACAAAGAGAGGACACAACAGCTGATGCCTCTCTTGGCCCCAAAGTaGGGTTCATCCAAGCGCTCC +
Preference number: 4 (lower is better)
Translates to: WVVCPVHCYKERTQQLMPLLAPK*GSSKRS
Trigger: GGAGCGCTTGGATGAACCTCACTTTGGGGCCAAGAG...AGGCATCAGCTGTTGTGTCCTCTCTTTGTAACAGTGGACAGGACAGACCACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
CDS-3UTR TCA 90 bp AGAACAAAACCAGGTGGATACAGAGGGCTGGGAGGCAACGGAAGTTTCGTTTGGGGCAGTGATGGCGCCTaGGTGCTCACCATGGATACA +
Preference number: 4 (lower is better)
Translates to: RTKPGGYRGLGGNGSFVWGSDGA*VLTMDT
Trigger: TGTATCCATGGTGAGCACTCAGGCGCCATCACTGCC...CCAAACGAAACTTCCGTTGCCTCCCAGCCCTCTGTATCCACCTGGTTTTGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR GCA 90 bp AACCACAAATGCTCACAGGGAAAGAACAAAACCAGGTGGATACAGAGGGCTGGGCTGGGCCTGGCATCGTaGTGGGGTCTCAGAAGCACA +
Preference number: 4 (lower is better)
Translates to: NHKCSQGKNKTRWIQRAGLGLAS*WGLRST
Trigger: TGTGCTTCTGAGACCCCAGCACGATGCCAGGCCCAG...CCCAGCCCTCTGTATCCACCTGGTTTTGTTCTTTCCCTGTGAGCATTTGTGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR GCA 90 bp AACCACAAATGCTCACAGGGAAAGAACAAAACCAGGTGGATACAGAGGGCTGGGAACCCGGGCAGGCTTTaGTCTGGGTCACTCAGCCCT +
Preference number: 4 (lower is better)
Translates to: NHKCSQGKNKTRWIQRAGNPGRL*SGSLSP
Trigger: AGGGCTGAGTGACCCAGAGCAAAGCCTGCCCGGGTT...CCCAGCCCTCTGTATCCACCTGGTTTTGTTCTTTCCCTGTGAGCATTTGTGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR CCA 90 bp ACTACATTGGCCAAGGGCACCCTCTGTTCGTCACTGATTATAGACCTAAGACCACCAGGGACCGAGACATaGCCAGGATTCCCTGGACCC +
Preference number: 4 (lower is better)
Translates to: TTLAKGTLCSSLIIDLRPPGTET*PGFPGP
Trigger: GGGTCCAGGGAATCCTGGCCATGTCTCGGTCCCTGG...TGGTCTTAGGTCTATAATCAGTGACGAACAGAGGGTGCCCTTGGCCAATGTAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
CDS-3UTR CCA 90 bp AGAACAAAACCAGGTGGATACAGAGGGCTGGGAGGCAACGGAAGTTTCGTTTGGTCACAGGTGACGCAGTaGCCTGTCTCCTGCAGCACT +
Preference number: 4 (lower is better)
Translates to: RTKPGGYRGLGGNGSFVWSQVTQ*PVSCST
Trigger: AGTGCTGCAGGAGACAGGCCACTGCGTCACCTGTGA...CCAAACGAAACTTCCGTTGCCTCCCAGCCCTCTGTATCCACCTGGTTTTGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR CCA 90 bp AACCACAAATGCTCACAGGGAAAGAACAAAACCAGGTGGATACAGAGGGCTGGGAAGCGGTCCTCCATGTaGTCTCTCCGGCCCTGGATG +
Preference number: 4 (lower is better)
Translates to: NHKCSQGKNKTRWIQRAGKRSSM*SLRPWM
Trigger: CATCCAGGGCCGGAGAGACCACATGGAGGACCGCTT...CCCAGCCCTCTGTATCCACCTGGTTTTGTTCTTTCCCTGTGAGCATTTGTGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR CCA 90 bp AACCACAAATGCTCACAGGGAAAGAACAAAACCAGGTGGATACAGAGGGCTGGGGCAAACTCAGCCGCCTaGCCTGGCCATCTCAGCACT +
Preference number: 4 (lower is better)
Translates to: NHKCSQGKNKTRWIQRAGANSAA*PGHLST
Trigger: AGTGCTGAGATGGCCAGGCCAGGCGGCTGAGTTTGC...CCCAGCCCTCTGTATCCACCTGGTTTTGTTCTTTCCCTGTGAGCATTTGTGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR CCA 90 bp GGGATTCCATGTCTGGGGTGGATGATCCTAATTACAACTCCCACACTTTTCACTGCTGGCCCACTTGGGTaGAGGCTTCCAGTGGCACCC +
Preference number: 4 (lower is better)
Translates to: GIPCLGWMILITTPTLFTAGPLG*RLPVAP
Trigger: GGGTGCCACTGGAAGCCTCCACCCAAGTGGGCCAGC...AGTGAAAAGTGTGGGAGTTGTAATTAGGATCATCCACCCCAGACATGGAATCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498165.6
3UTR CAA 72 bp AGCAAGGGAAGAGGGTTATCTCTGCTGTGCAGGCAGTaGCCACTGGTCTCTCATTCTCTCTGCTTCTCGCAG +
Preference number: 4 (lower is better)
Translates to: SKGRGLSLLCRQ*PLVSHSLCFSQ
Trigger: CTGCGAGAAGCAGAGAGAATGAGAGACCAGTGGCAACTGCCTGCACAGCAGAGATAACCCTCTTCCCTTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
CDS-3UTR TCA 90 bp TGGGTGGTCTGTCCTGTCCACTGTTACAAAGAGAGGACACAACAGCTGATGCCTAGAGGACACAACAGCTaGTGCCTGGAGGACCCTGAA +
Preference number: 4 (lower is better)
Translates to: WVVCPVHCYKERTQQLMPRGHNS*CLEDPE
Trigger: TTCAGGGTCCTCCAGGCATCAGCTGTTGTGTCCTCT...AGGCATCAGCTGTTGTGTCCTCTCTTTGTAACAGTGGACAGGACAGACCACCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
CDS-3UTR TCA 90 bp ACTACATTGGCCAAGGGCACCCTCTGTTCGTCACTGATTATAGACCTAAGACCACTGACCACTCACAGGTaGCGCAGTGGCCTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: TTLAKGTLCSSLIIDLRPLTTHR*RSGLSP
Trigger: AGGAGACAGGCCACTGCGTCACCTGTGAGTGGTCAG...TGGTCTTAGGTCTATAATCAGTGACGAACAGAGGGTGCCCTTGGCCAATGTAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
CDS-3UTR TCA 90 bp AGGAAGCAAGGGAAGAGGGTTATCTCTGCTGTGCAGGCAGTTGCCACTGGTCTCACACTGCCTGACACTTaGAAACCACTTGGAAAGGGG +
Preference number: 4 (lower is better)
Translates to: RKQGKRVISAVQAVATGLTLPDT*KPLGKG
Trigger: CCCCTTTCCAAGTGGTTTTCAAGTGTCAGGCAGTGT...GAGACCAGTGGCAACTGCCTGCACAGCAGAGATAACCCTCTTCCCTTGCTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR TCA 90 bp GACACAACAGCTGATGCCTGGAGGACCCTGAACAGGATCTTGAAAAGAATCTTCCGAGGAGGTGGCCGGTaGATGTGGCATATGGGAAGC +
Preference number: 4 (lower is better)
Translates to: DTTADAWRTLNRILKRIFRGGGR*MWHMGS
Trigger: GCTTCCCATATGCCACATTCACCGGCCACCTCCTCG...GAAGATTCTTTTCAAGATCCTGTTCAGGGTCCTCCAGGCATCAGCTGTTGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR TCA 90 bp GCAGAAAACATGGGCTCAGAAGGACAAAGCATTCTCAGGACAGCTCTGTCTCTTCGAGGAGGTGGCCGGTaGATGTGGCATATGGGAAGC +
Preference number: 4 (lower is better)
Translates to: AENMGSEGQSILRTALSLRGGGR*MWHMGS
Trigger: GCTTCCCATATGCCACATTCACCGGCCACCTCCTCG...AAGAGACAGAGCTGTCCTGAGAATGCTTTGTCCTTCTGAGCCCATGTTTTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR TCA 90 bp GTCTGTCCTGTCCACTGTTACAAAGAGAGGACACAACAGCTGATGCCTGGAGGAGCAAGAAGTAGCGCATaGTGCGACCCAGCAGAGACA +
Preference number: 4 (lower is better)
Translates to: VCPVHCYKERTQQLMPGGARSSA*CDPAET
Trigger: TGTCTCTGCTGGGTCGCATCATGCGCTACTTCTTGC...TCCTCCAGGCATCAGCTGTTGTGTCCTCTCTTTGTAACAGTGGACAGGACAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR TCA 90 bp GGGATTCCATGTCTGGGGTGGATGATCCTAATTACAACTCCCACACTTTTCACTGGGCACCCCCAGGAGTaGTGTCTGCACATCCCCAAC +
Preference number: 4 (lower is better)
Translates to: GIPCLGWMILITTPTLFTGHPQE*CLHIPN
Trigger: GTTGGGGATGTGCAGACATCACTCCTGGGGGTGCCC...AGTGAAAAGTGTGGGAGTTGTAATTAGGATCATCCACCCCAGACATGGAATCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR GCA 90 bp ACTACATTGGCCAAGGGCACCCTCTGTTCGTCACTGATTATAGACCTAAGACCACAGTGGCCTGTCTCCTaGAGCACTGGGTGGTCTGTC +
Preference number: 4 (lower is better)
Translates to: TTLAKGTLCSSLIIDLRPQWPVS*STGWSV
Trigger: GACAGACCACCCAGTGCTGCAGGAGACAGGCCACTG...TGGTCTTAGGTCTATAATCAGTGACGAACAGAGGGTGCCCTTGGCCAATGTAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
CDS-3UTR GCA 90 bp ACTGAGCAGAAAACATGGGCTCAGAAGGACAAAGCATTCTCAGGACAGCTCTGTCAGTGGCCTGTCTCCTaGAGCACTGGGTGGTCTGTC +
Preference number: 4 (lower is better)
Translates to: TEQKTWAQKDKAFSGQLCQWPVS*STGWSV
Trigger: GACAGACCACCCAGTGCTGCAGGAGACAGGCCACTG...ACAGAGCTGTCCTGAGAATGCTTTGTCCTTCTGAGCCCATGTTTTCTGCTCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
CDS-3UTR GCA 90 bp TGGGTGGTCTGTCCTGTCCACTGTTACAAAGAGAGGACACAACAGCTGATGCCTGGGTTATCTCTGCTGTaGAGGCAGTTGCCACTGGTC +
Preference number: 4 (lower is better)
Translates to: WVVCPVHCYKERTQQLMPGLSLL*RQLPLV
Trigger: GACCAGTGGCAACTGCCTGCACAGCAGAGATAACCC...AGGCATCAGCTGTTGTGTCCTCTCTTTGTAACAGTGGACAGGACAGACCACCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
CDS-3UTR GCA 90 bp AGGAAGCAAGGGAAGAGGGTTATCTCTGCTGTGCAGGCAGTTGCCACTGGTCTCAGTAGCTGGGAACTCTaGACCTGGCTTCAAGGAACA +
Preference number: 4 (lower is better)
Translates to: RKQGKRVISAVQAVATGLSSWEL*TWLQGT
Trigger: TGTTCCTTGAAGCCAGGTGCAGAGTTCCCAGCTACT...GAGACCAGTGGCAACTGCCTGCACAGCAGAGATAACCCTCTTCCCTTGCTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR GCA 90 bp CACTCCTTTCTCAATGCAAACAGCTTACTTGCCAGGGAACACTGTGACTCATTCACTGCCAGGTCCCTTTaGTGCCTCCCCTGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: HSFLNANSLLAREHCDSFTARSL*CLPCRP
Trigger: AGGCCTGCAGGGGAGGCAGCAAAGGGACCTGGCAGT...GAATGAGTCACAGTGTTCCCTGGCAAGTAAGCTGTTTGCATTGAGAAAGGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR CCA 90 bp TGGGTGGTCTGTCCTGTCCACTGTTACAAAGAGAGGACACAACAGCTGATGCCTGTGGATACAGAGGGCTaGGAGGCAACGGAAGTTTCG +
Preference number: 4 (lower is better)
Translates to: WVVCPVHCYKERTQQLMPVDTEG*EATEVS
Trigger: CGAAACTTCCGTTGCCTCCCAGCCCTCTGTATCCAC...AGGCATCAGCTGTTGTGTCCTCTCTTTGTAACAGTGGACAGGACAGACCACCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR CCA 90 bp CTACTGCTGCACCCTTGCACAGCTGCTGGCCCACTTGGGTGGAGGCTTCCAGTGGGTGAATGTGGCATATaGGAAGCTATAACCACAAAT +
Preference number: 4 (lower is better)
Translates to: LLLHPCTAAGPLGWRLPVGECGI*EAITTN
Trigger: ATTTGTGGTTATAGCTTCCCATATGCCACATTCACC...CACTGGAAGCCTCCACCCAAGTGGGCCAGCAGCTGTGCAAGGGTGCAGCAGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR CCA 90 bp AGAACAAAACCAGGTGGATACAGAGGGCTGGGAGGCAACGGAAGTTTCGTTTGGGGCTGGACTTCACGATaGTCTTCACCTCGTCGGTGT +
Preference number: 4 (lower is better)
Translates to: RTKPGGYRGLGGNGSFVWGWTSR*SSPRRC
Trigger: ACACCGACGAGGTGAAGACCATCGTGAAGTCCAGCC...CCAAACGAAACTTCCGTTGCCTCCCAGCCCTCTGTATCCACCTGGTTTTGTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR CCA 90 bp GGGATTCCATGTCTGGGGTGGATGATCCTAATTACAACTCCCACACTTTTCACTAGCTGCTGGCCCACTTaGGTGGAGGCTTCCAGTGGC +
Preference number: 4 (lower is better)
Translates to: GIPCLGWMILITTPTLFTSCWPT*VEASSG
Trigger: GCCACTGGAAGCCTCCACCCAAGTGGGCCAGCAGCT...AGTGAAAAGTGTGGGAGTTGTAATTAGGATCATCCACCCCAGACATGGAATCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR TCA 90 bp AGGAAGCAAGGGAAGAGGGTTATCTCTGCTGTGCAGGCAGTTGCCACTGGTCTCCTGCTTCTTCATTGCTaGAAGCATCCCAGAGACCAT +
Preference number: 4 (lower is better)
Translates to: RKQGKRVISAVQAVATGLLLLHC*KHPRDH
Trigger: ATGGTCTCTGGGATGCTTTCAGCAATGAAGAAGCAG...GAGACCAGTGGCAACTGCCTGCACAGCAGAGATAACCCTCTTCCCTTGCTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
CDS-3UTR TCA 90 bp GACACAACAGCTGATGCCTGGAGGACCCTGAACAGGATCTTGAAAAGAATCTTCCTCTTGGCCCCAAAGTaGGGTTCATCCAAGCGCTCC +
Preference number: 4 (lower is better)
Translates to: DTTADAWRTLNRILKRIFLLAPK*GSSKRS
Trigger: GGAGCGCTTGGATGAACCTCACTTTGGGGCCAAGAG...GAAGATTCTTTTCAAGATCCTGTTCAGGGTCCTCCAGGCATCAGCTGTTGTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
CDS-3UTR TCA 90 bp AACCACAAATGCTCACAGGGAAAGAACAAAACCAGGTGGATACAGAGGGCTGGGTGTTGGCCAGATCCGTaGGAACTTCGAAGCGGTCCT +
Preference number: 4 (lower is better)
Translates to: NHKCSQGKNKTRWIQRAGCWPDP*ELRSGP
Trigger: AGGACCGCTTCGAAGTTCTCACGGATCTGGCCAACA...CCCAGCCCTCTGTATCCACCTGGTTTTGTTCTTTCCCTGTGAGCATTTGTGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR TCA 90 bp ACCACAAATGCTCACAGGGAAAGAACAAAACCAGGTGGATACAGAGGGCTGGGAACACGCCATGCATCTTaGGTGACCGTGCACTGCCAT +
Preference number: 4 (lower is better)
Translates to: TTNAHRERTKPGGYRGLGTRHAS*VTVHCH
Trigger: ATGGCAGTGCACGGTCACTCAAGATGCATGGCGTGT...TCCCAGCCCTCTGTATCCACCTGGTTTTGTTCTTTCCCTGTGAGCATTTGTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR GCA 90 bp AACCACAAATGCTCACAGGGAAAGAACAAAACCAGGTGGATACAGAGGGCTGGGGGGTTATCTCTGCTGTaGAGGCAGTTGCCACTGGTC +
Preference number: 4 (lower is better)
Translates to: NHKCSQGKNKTRWIQRAGGLSLL*RQLPLV
Trigger: GACCAGTGGCAACTGCCTGCACAGCAGAGATAACCC...CCCAGCCCTCTGTATCCACCTGGTTTTGTTCTTTCCCTGTGAGCATTTGTGGTT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR GCA 90 bp TCCACAGAGCAGGATTTAGACGTTTTCATTACTACACGAAGAAGTCATCATTTGCCTCCCCTGCAGGCCTaGAGGCCACGGGGCGGTTTG +
Preference number: 4 (lower is better)
Translates to: STEQDLDVFITTRRSHHLPPLQA*RPRGGL
Trigger: CAAACCGCCCCGTGGCCTGCAGGCCTGCAGGGGAGG...CAAATGATGACTTCTTCGTGTAGTAATGAAAACGTCTAAATCCTGCTCTGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR GCA 90 bp GCACCTGGCTTCAAGGAACACACATACAGTTATAGGCTGCTGCTTCTCAGAACACCGAAGATGGACGGGTaGGTCTTGTTGGCCAGATCC +
Preference number: 4 (lower is better)
Translates to: APGFKEHTYSYRLLLLRTPKMDG*VLLARS
Trigger: GGATCTGGCCAACAAGACGCACCCGTCCATCTTCGG...TGTTCTGAGAAGCAGCAGCCTATAACTGTATGTGTGTTCCTTGAAGCCAGGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR GCA 90 bp CTCAGTCCACAGCAAGGAATAAAATGCAGCCACTGGTTACCAGTACTATGTACAGCAGTCTCTCCCCCGTaGCCGTCGAAGATCCCGAAG +
Preference number: 4 (lower is better)
Translates to: LSPQQGIKCSHWLPVLCTAVSPP*PSKIPK
Trigger: CTTCGGGATCTTCGACGGGCACGGGGGAGAGACTGC...TGTACATAGTACTGGTAACCAGTGGCTGCATTTTATTCCTTGCTGTGGACTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR GCA 90 bp AGTAAACCATTCCAAATCTGCTTCCAAGCTGCTACTGAGCAGAAAACATGGGCTGCACCCTTGCACAGCTaGTGGCCCACTTGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: SKPFQICFQAATEQKTWAAPLHS*WPTWVE
Trigger: CTCCACCCAAGTGGGCCAGCAGCTGTGCAAGGGTGC...AGCCCATGTTTTCTGCTCAGTAGCAGCTTGGAAGCAGATTTGGAATGGTTTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR CCA 90 bp AACCACAAATGCTCACAGGGAAAGAACAAAACCAGGTGGATACAGAGGGCTGGGTCCTGCAGCACTGGGTaGTCTGTCCTGTCCACTGTT +
Preference number: 4 (lower is better)
Translates to: NHKCSQGKNKTRWIQRAGSCSTG*SVLSTV
Trigger: AACAGTGGACAGGACAGACCACCCAGTGCTGCAGGA...CCCAGCCCTCTGTATCCACCTGGTTTTGTTCTTTCCCTGTGAGCATTTGTGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR CCA 90 bp GACACAACAGCTGATGCCTGGAGGACCCTGAACAGGATCTTGAAAAGAATCTTCTCACAGGTGACGCAGTaGCCTGTCTCCTGCAGCACT +
Preference number: 4 (lower is better)
Translates to: DTTADAWRTLNRILKRIFSQVTQ*PVSCST
Trigger: AGTGCTGCAGGAGACAGGCCACTGCGTCACCTGTGA...GAAGATTCTTTTCAAGATCCTGTTCAGGGTCCTCCAGGCATCAGCTGTTGTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
CDS-3UTR CCA 90 bp TGGGTGGTCTGTCCTGTCCACTGTTACAAAGAGAGGACACAACAGCTGATGCCTGCAGGCAGTTGCCACTaGTCTCTCATTCTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: WVVCPVHCYKERTQQLMPAGSCH*SLILSA
Trigger: AGCAGAGAGAATGAGAGACCAGTGGCAACTGCCTGC...AGGCATCAGCTGTTGTGTCCTCTCTTTGTAACAGTGGACAGGACAGACCACCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
CDS-3UTR CCA 90 bp ACAGAGGGCTGGGAGGCAACGGAAGTTTCGTTTGGCTGTTTGAGTCACCTTAGGATTTCCAGTTCCACATaGCTGGGGAGGCCTCAGAAT +
Preference number: 4 (lower is better)
Translates to: TEGWEATEVSFGCLSHLRISSST*LGRPQN
Trigger: ATTCTGAGGCCTCCCCAGCCATGTGGAACTGGAAAT...CCTAAGGTGACTCAAACAGCCAAACGAAACTTCCGTTGCCTCCCAGCCCTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464260.5
CDS-3UTR CCA 90 bp ACCACAAATGCTCACAGGGAAAGAACAAAACCAGGTGGATACAGAGGGCTGGGAGTGGATACAGAGGGCTaGGAGGCAACGGAAGTTTCG +
Preference number: 4 (lower is better)
Translates to: TTNAHRERTKPGGYRGLGVDTEG*EATEVS
Trigger: CGAAACTTCCGTTGCCTCCCAGCCCTCTGTATCCAC...TCCCAGCCCTCTGTATCCACCTGGTTTTGTTCTTTCCCTGTGAGCATTTGTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR CCA 90 bp GCAGAAAACATGGGCTCAGAAGGACAAAGCATTCTCAGGACAGCTCTGTCTCTTTCCACGGCGAGGAGGTaGCCGGTGAATGTGGCATAT +
Preference number: 4 (lower is better)
Translates to: AENMGSEGQSILRTALSLSTARR*PVNVAY
Trigger: ATATGCCACATTCACCGGCCACCTCCTCGCCGTGGA...AAGAGACAGAGCTGTCCTGAGAATGCTTTGTCCTTCTGAGCCCATGTTTTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR CCA 90 bp AGGAAGCAAGGGAAGAGGGTTATCTCTGCTGTGCAGGCAGTTGCCACTGGTCTCCACCATGGGGACTATTaGCAATTCGAACTCGAGCTA +
Preference number: 4 (lower is better)
Translates to: RKQGKRVISAVQAVATGLHHGDY*QFELEL
Trigger: TAGCTCGAGTTCGAATTGCCAATAGTCCCCATGGTG...GAGACCAGTGGCAACTGCCTGCACAGCAGAGATAACCCTCTTCCCTTGCTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR CCA 90 bp TCCCCTAACGTGGTTTCTTGGTCACGTAAGATGAAAAATCAGGGTATCTGTTGGCCCTTGCACAGCTGCTaGCCCACTTGGGTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: SPNVVSWSRKMKNQGICWPLHSC*PTWVEA
Trigger: AGCCTCCACCCAAGTGGGCCAGCAGCTGTGCAAGGG...CCAACAGATACCCTGATTTTTCATCTTACGTGACCAAGAAACCACGTTAGGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR TCA 90 bp AGGGAAGAGGGTTATCTCTGCTGTGCAGGCAGTTGCCACTGGTCTCTCATTCTCCTGATGCCAAGATCATaGACTCAGGCTGAAGCTTGT +
Preference number: 4 (lower is better)
Translates to: REEGYLCCAGSCHWSLILLMPRS*TQAEAC
Trigger: ACAAGCTTCAGCCTGAGTTCATGATCTTGGCATCAG...GAGAATGAGAGACCAGTGGCAACTGCCTGCACAGCAGAGATAACCCTCTTCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
CDS-3UTR TCA 90 bp ACAGAGGGCTGGGAGGCAACGGAAGTTTCGTTTGGCTGTTTGAGTCACCTTAGGCTGCTTCTTCATTGCTaGAAGCATCCCAGAGACCAT +
Preference number: 4 (lower is better)
Translates to: TEGWEATEVSFGCLSHLRLLLHC*KHPRDH
Trigger: ATGGTCTCTGGGATGCTTTCAGCAATGAAGAAGCAG...CCTAAGGTGACTCAAACAGCCAAACGAAACTTCCGTTGCCTCCCAGCCCTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR TCA 90 bp GACTATTGGCAATTCGAACTCGAGCTAGCTAGGGAGTCTAGGAAGCCTTGGGTGCTAGGAAGCCTTGGGTaGCAATTCCAAAGCTTTGGC +
Preference number: 4 (lower is better)
Translates to: DYWQFELELARESRKPWVLGSLG*QFQSFG
Trigger: GCCAAAGCTTTGGAATTGTCACCCAAGGCTTCCTAG...CACCCAAGGCTTCCTAGACTCCCTAGCTAGCTCGAGTTCGAATTGCCAATAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR GCA 90 bp AGTAAACCATTCCAAATCTGCTTCCAAGCTGCTACTGAGCAGAAAACATGGGCTCAGTGGCCTGTCTCCTaGAGCACTGGGTGGTCTGTC +
Preference number: 4 (lower is better)
Translates to: SKPFQICFQAATEQKTWAQWPVS*STGWSV
Trigger: GACAGACCACCCAGTGCTGCAGGAGACAGGCCACTG...AGCCCATGTTTTCTGCTCAGTAGCAGCTTGGAAGCAGATTTGGAATGGTTTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
CDS-3UTR GCA 90 bp GTCTGTCCTGTCCACTGTTACAAAGAGAGGACACAACAGCTGATGCCTGGAGGATTACTGTGTTGCAACTaGCAGGTCCCTTTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: VCPVHCYKERTQQLMPGGLLCCN*QVPLLP
Trigger: AGGCAGCAAAGGGACCTGGCAGTTGCAACACAGTAA...TCCTCCAGGCATCAGCTGTTGTGTCCTCTCTTTGTAACAGTGGACAGGACAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR GCA 90 bp ACTGAGCAGAAAACATGGGCTCAGAAGGACAAAGCATTCTCAGGACAGCTCTGTCCCAGGAGTGATGTCTaGACATCCCCAACAGCTGGA +
Preference number: 4 (lower is better)
Translates to: TEQKTWAQKDKAFSGQLCPRSDV*TSPTAG
Trigger: TCCAGCTGTTGGGGATGTGCAGACATCACTCCTGGG...ACAGAGCTGTCCTGAGAATGCTTTGTCCTTCTGAGCCCATGTTTTCTGCTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR GCA 90 bp GACTATTGGCAATTCGAACTCGAGCTAGCTAGGGAGTCTAGGAAGCCTTGGGTGCCAAAGCTTTGGCAGTaGTGCTTAGGGAAGCTTCAC +
Preference number: 4 (lower is better)
Translates to: DYWQFELELARESRKPWVPKLWQ*CLGKLH
Trigger: GTGAAGCTTCCCTAAGCAGCACTGCCAAAGCTTTGG...CACCCAAGGCTTCCTAGACTCCCTAGCTAGCTCGAGTTCGAATTGCCAATAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR GCA 90 bp GGGATTCCATGTCTGGGGTGGATGATCCTAATTACAACTCCCACACTTTTCACTGTATCAACTGCCCCCTaGCCTTTGCAATCCGCCACC +
Preference number: 4 (lower is better)
Translates to: GIPCLGWMILITTPTLFTVSTAP*PLQSAT
Trigger: GGTGGCGGATTGCAAAGGGCAGGGGGCAGTTGATAC...AGTGAAAAGTGTGGGAGTTGTAATTAGGATCATCCACCCCAGACATGGAATCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR GCA 90 bp ACAGAGGGCTGGGAGGCAACGGAAGTTTCGTTTGGCTGTTTGAGTCACCTTAGGGCCCTTACAGTAATCTaGTTGTGCTCAATGTCCTCG +
Preference number: 4 (lower is better)
Translates to: TEGWEATEVSFGCLSHLRALTVI*LCSMSS
Trigger: CGAGGACATTGAGCACAAGCAGATTACTGTAAGGGC...CCTAAGGTGACTCAAACAGCCAAACGAAACTTCCGTTGCCTCCCAGCCCTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR CCA 90 bp GTCTGTCCTGTCCACTGTTACAAAGAGAGGACACAACAGCTGATGCCTGGAGGACAGGATGTCTGGGTCTaGGATGACCACGTTGAGATT +
Preference number: 4 (lower is better)
Translates to: VCPVHCYKERTQQLMPGGQDVWV*DDHVEI
Trigger: AATCTCAACGTGGTCATCCCAGACCCAGACATCCTG...TCCTCCAGGCATCAGCTGTTGTGTCCTCTCTTTGTAACAGTGGACAGGACAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
CDS-3UTR CCA 90 bp TGGGTGGTCTGTCCTGTCCACTGTTACAAAGAGAGGACACAACAGCTGATGCCTGAGGCCTCAGAATCATaGCAGGAGATGAAAGGCACT +
Preference number: 4 (lower is better)
Translates to: WVVCPVHCYKERTQQLMPEASES*QEMKGT
Trigger: AGTGCCTTTCATCTCCTGCCATGATTCTGAGGCCTC...AGGCATCAGCTGTTGTGTCCTCTCTTTGTAACAGTGGACAGGACAGACCACCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464260.5
CDS-3UTR CCA 90 bp ACAGAGGGCTGGGAGGCAACGGAAGTTTCGTTTGGCTGTTTGAGTCACCTTAGGACAAAAACTGGCAGCTaGAGCTCAATTCAGGGTGGT +
Preference number: 4 (lower is better)
Translates to: TEGWEATEVSFGCLSHLRTKTGS*SSIQGG
Trigger: ACCACCCTGAATTGAGCTCCAGCTGCCAGTTTTTGT...CCTAAGGTGACTCAAACAGCCAAACGAAACTTCCGTTGCCTCCCAGCCCTCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR CCA 90 bp GCAGAAAACATGGGCTCAGAAGGACAAAGCATTCTCAGGACAGCTCTGTCTCTTCCAAGCTGCAGTAGCTaGGAACTCTGCACCTGGCTT +
Preference number: 4 (lower is better)
Translates to: AENMGSEGQSILRTALSLPSCSS*ELCTWL
Trigger: AAGCCAGGTGCAGAGTTCCCAGCTACTGCAGCTTGG...AAGAGACAGAGCTGTCCTGAGAATGCTTTGTCCTTCTGAGCCCATGTTTTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR CCA 90 bp GTCTGTCCTGTCCACTGTTACAAAGAGAGGACACAACAGCTGATGCCTGGAGGACGGTTTGTATTTGCCTaGGGAAAGCTCCCTGATGTG +
Preference number: 4 (lower is better)
Translates to: VCPVHCYKERTQQLMPGGRFVFA*GKLPDV
Trigger: CACATCAGGGAGCTTTCCCCAGGCAAATACAAACCG...TCCTCCAGGCATCAGCTGTTGTGTCCTCTCTTTGTAACAGTGGACAGGACAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR CCA 90 bp AAGAAAGTTAAGTGCTTGGAGAAATCAAGACAGATTGCAGCCCTCCACATCTACTGGTCTCTCCGGCCCTaGATGGAGTACACCGCCACG +
Preference number: 4 (lower is better)
Translates to: KKVKCLEKSRQIAALHIYWSLRP*MEYTAT
Trigger: CGTGGCGGTGTACTCCATCCAGGGCCGGAGAGACCA...GTAGATGTGGAGGGCTGCAATCTGTCTTGATTTCTCCAAGCACTTAACTTTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR CCA 90 bp ACTGAGCAGAAAACATGGGCTCAGAAGGACAAAGCATTCTCAGGACAGCTCTGTCGAAGATCCCGAAGATaGACGGGTGCGTCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: TEQKTWAQKDKAFSGQLCRRSRR*TGASCW
Trigger: CCAACAAGACGCACCCGTCCATCTTCGGGATCTTCG...ACAGAGCTGTCCTGAGAATGCTTTGTCCTTCTGAGCCCATGTTTTCTGCTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498165.6
3UTR CAA 72 bp ACCCATCAAAGCGACCCAAATGACACGCCATGCATCTaGAGTGACCGTGCACTGCCATATACTCTGAGCTCT +
Preference number: 4 (lower is better)
Translates to: THQSDPNDTPCI*SDRALPYTLSS
Trigger: AGAGCTCAGAGTATATGGCAGTGCACGGTCACTCAAGATGCATGGCGTGTCATTTGGGTCGCTTTGATGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR TCA 90 bp CACTCCTTTCTCAATGCAAACAGCTTACTTGCCAGGGAACACTGTGACTCATTCGTCGATCGTTCTGCATaGTCTCGGCTACCTTGCCCT +
Preference number: 4 (lower is better)
Translates to: HSFLNANSLLAREHCDSFVDRSA*SRLPCP
Trigger: AGGGCAAGGTAGCCGAGATCATGCAGAACGATCGAC...GAATGAGTCACAGTGTTCCCTGGCAAGTAAGCTGTTTGCATTGAGAAAGGAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR TCA 90 bp GCAGAAAACATGGGCTCAGAAGGACAAAGCATTCTCAGGACAGCTCTGTCTCTTGTGCTGATTTCAGTTTaGTGGTGGGTGGGGGCAACT +
Preference number: 4 (lower is better)
Translates to: AENMGSEGQSILRTALSLVLISV*WWVGAT
Trigger: AGTTGCCCCCACCCACCATCAAACTGAAATCAGCAC...AAGAGACAGAGCTGTCCTGAGAATGCTTTGTCCTTCTGAGCCCATGTTTTCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR GCA 90 bp ACTGAGCAGAAAACATGGGCTCAGAAGGACAAAGCATTCTCAGGACAGCTCTGTTGCTGTGCAGGCAGTTaGCACTGGTCTCTCATTCTC +
Preference number: 4 (lower is better)
Translates to: TEQKTWAQKDKAFSGQLCCCAGS*HWSLIL
Trigger: GAGAATGAGAGACCAGTGGCAACTGCCTGCACAGCA...ACAGAGCTGTCCTGAGAATGCTTTGTCCTTCTGAGCCCATGTTTTCTGCTCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
CDS-3UTR GCA 90 bp GCAGAAAACATGGGCTCAGAAGGACAAAGCATTCTCAGGACAGCTCTGTCTCTTGAAGAGGGTTATCTCTaGTGTGCAGGCAGTTGCCAC +
Preference number: 4 (lower is better)
Translates to: AENMGSEGQSILRTALSLEEGYL*CAGSCH
Trigger: GTGGCAACTGCCTGCACAGCAGAGATAACCCTCTTC...AAGAGACAGAGCTGTCCTGAGAATGCTTTGTCCTTCTGAGCCCATGTTTTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
CDS-3UTR GCA 90 bp GCAGAAAACATGGGCTCAGAAGGACAAAGCATTCTCAGGACAGCTCTGTCTCTTCACCAAATCCCAAGCTaGAGTAGCTGGGAACTCTGC +
Preference number: 4 (lower is better)
Translates to: AENMGSEGQSILRTALSLHQIPS*SSWELC
Trigger: GCAGAGTTCCCAGCTACTGCAGCTTGGGATTTGGTG...AAGAGACAGAGCTGTCCTGAGAATGCTTTGTCCTTCTGAGCCCATGTTTTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR GCA 90 bp AGGAAGCAAGGGAAGAGGGTTATCTCTGCTGTGCAGGCAGTTGCCACTGGTCTCAATGTTGAAGACTGCTaGCTTTCCATTGTCAAGGAG +
Preference number: 4 (lower is better)
Translates to: RKQGKRVISAVQAVATGLNVEDC*LSIVKE
Trigger: CTCCTTGACAATGGAAAGGCAGCAGTCTTCAACATT...GAGACCAGTGGCAACTGCCTGCACAGCAGAGATAACCCTCTTCCCTTGCTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR CCA 90 bp CAGTTTCTTAACTACATTGGCCAAGGGCACCCTCTGTTCGTCACTGATTATAGAATGGCCAGGATTCCCTaGACCCTCCAGGAGCCATTG +
Preference number: 4 (lower is better)
Translates to: QFLNYIGQGHPLFVTDYRMARIP*TLQEPL
Trigger: CAATGGCTCCTGGAGGGTCCAGGGAATCCTGGCCAT...TCTATAATCAGTGACGAACAGAGGGTGCCCTTGGCCAATGTAGTTAAGAAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
CDS-3UTR CCA 90 bp AACCACAAATGCTCACAGGGAAAGAACAAAACCAGGTGGATACAGAGGGCTGGGAAAGGTCAGGATGTCTaGGTCTGGGATGACCACGTT +
Preference number: 4 (lower is better)
Translates to: NHKCSQGKNKTRWIQRAGKGQDV*VWDDHV
Trigger: AACGTGGTCATCCCAGACCCAGACATCCTGACCTTT...CCCAGCCCTCTGTATCCACCTGGTTTTGTTCTTTCCCTGTGAGCATTTGTGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR CCA 90 bp ACCACAAATGCTCACAGGGAAAGAACAAAACCAGGTGGATACAGAGGGCTGGGAAAAGGTCAGGATGTCTaGGTCTGGGATGACCACGTT +
Preference number: 4 (lower is better)
Translates to: TTNAHRERTKPGGYRGLGKGQDV*VWDDHV
Trigger: AACGTGGTCATCCCAGACCCAGACATCCTGACCTTT...TCCCAGCCCTCTGTATCCACCTGGTTTTGTTCTTTCCCTGTGAGCATTTGTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR CCA 90 bp CAGTTTCTTAACTACATTGGCCAAGGGCACCCTCTGTTCGTCACTGATTATAGATGTCTCCTGCAGCACTaGGTGGTCTGTCCTGTCCAC +
Preference number: 4 (lower is better)
Translates to: QFLNYIGQGHPLFVTDYRCLLQH*VVCPVH
Trigger: GTGGACAGGACAGACCACCCAGTGCTGCAGGAGACA...TCTATAATCAGTGACGAACAGAGGGTGCCCTTGGCCAATGTAGTTAAGAAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
CDS-3UTR CCA 90 bp AGGGAAGAGGGTTATCTCTGCTGTGCAGGCAGTTGCCACTGGTCTCTCATTCTCACTGAGCAGAAAACATaGGCTCAGAAGGACAAAGCA +
Preference number: 4 (lower is better)
Translates to: REEGYLCCAGSCHWSLILTEQKT*AQKDKA
Trigger: TGCTTTGTCCTTCTGAGCCCATGTTTTCTGCTCAGT...GAGAATGAGAGACCAGTGGCAACTGCCTGCACAGCAGAGATAACCCTCTTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
CDS-3UTR CCA 90 bp GCAGAAAACATGGGCTCAGAAGGACAAAGCATTCTCAGGACAGCTCTGTCTCTTGCAGGCAGTTGCCACTaGTCTCTCATTCTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: AENMGSEGQSILRTALSLAGSCH*SLILSA
Trigger: AGCAGAGAGAATGAGAGACCAGTGGCAACTGCCTGC...AAGAGACAGAGCTGTCCTGAGAATGCTTTGTCCTTCTGAGCCCATGTTTTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
CDS-3UTR CCA 90 bp ACTGAGCAGAAAACATGGGCTCAGAAGGACAAAGCATTCTCAGGACAGCTCTGTTACACCGCCACGTTGTaGTTCTTGAACTCCCAGGTC +
Preference number: 4 (lower is better)
Translates to: TEQKTWAQKDKAFSGQLCYTATL*FLNSQV
Trigger: GACCTGGGAGTTCAAGAACCACAACGTGGCGGTGTA...ACAGAGCTGTCCTGAGAATGCTTTGTCCTTCTGAGCCCATGTTTTCTGCTCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR CCA 90 bp CAGTTTCTTAACTACATTGGCCAAGGGCACCCTCTGTTCGTCACTGATTATAGAGCATTAATGGAGACCTaGGCCTGGCATCGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: QFLNYIGQGHPLFVTDYRALMET*AWHRAG
Trigger: CCCAGCACGATGCCAGGCCCAGGTCTCCATTAATGC...TCTATAATCAGTGACGAACAGAGGGTGCCCTTGGCCAATGTAGTTAAGAAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR CCA 90 bp GCACCTGGCTTCAAGGAACACACATACAGTTATAGGCTGCTGCTTCTCAGAACATTGGGAGGCCAAGGCTaGTGGATTACAAGGTCAGGA +
Preference number: 4 (lower is better)
Translates to: APGFKEHTYSYRLLLLRTLGGQG*WITRSG
Trigger: TCCTGACCTTGTAATCCACCAGCCTTGGCCTCCCAA...TGTTCTGAGAAGCAGCAGCCTATAACTGTATGTGTGTTCCTTGAAGCCAGGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR TCA 90 bp ACCACAAATGCTCACAGGGAAAGAACAAAACCAGGTGGATACAGAGGGCTGGGACTGATGCCAAGATCATaGACTCAGGCTGAAGCTTGT +
Preference number: 4 (lower is better)
Translates to: TTNAHRERTKPGGYRGLGLMPRS*TQAEAC
Trigger: ACAAGCTTCAGCCTGAGTTCATGATCTTGGCATCAG...TCCCAGCCCTCTGTATCCACCTGGTTTTGTTCTTTCCCTGTGAGCATTTGTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR TCA 90 bp AACCACAAATGCTCACAGGGAAAGAACAAAACCAGGTGGATACAGAGGGCTGGGATCCCAGAGACCATCTaGTGCCAAGATCATGAACTC +
Preference number: 4 (lower is better)
Translates to: NHKCSQGKNKTRWIQRAGIPETI*CQDHEL
Trigger: GAGTTCATGATCTTGGCATCAGATGGTCTCTGGGAT...CCCAGCCCTCTGTATCCACCTGGTTTTGTTCTTTCCCTGTGAGCATTTGTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR TCA 90 bp AACCACAAATGCTCACAGGGAAAGAACAAAACCAGGTGGATACAGAGGGCTGGGCTGCTTCTTCATTGCTaGAAGCATCCCAGAGACCAT +
Preference number: 4 (lower is better)
Translates to: NHKCSQGKNKTRWIQRAGLLLHC*KHPRDH
Trigger: ATGGTCTCTGGGATGCTTTCAGCAATGAAGAAGCAG...CCCAGCCCTCTGTATCCACCTGGTTTTGTTCTTTCCCTGTGAGCATTTGTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR TCA 90 bp GTCTGTCCTGTCCACTGTTACAAAGAGAGGACACAACAGCTGATGCCTGGAGGATATTCAGCTGCAGTCTaGGACTGGGAAGAAAAAGAG +
Preference number: 4 (lower is better)
Translates to: VCPVHCYKERTQQLMPGGYSAAV*DWEEKE
Trigger: CTCTTTTTCTTCCCAGTCTCAGACTGCAGCTGAATA...TCCTCCAGGCATCAGCTGTTGTGTCCTCTCTTTGTAACAGTGGACAGGACAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464260.5
CDS-3UTR TCA 90 bp GACACAACAGCTGATGCCTGGAGGACCCTGAACAGGATCTTGAAAAGAATCTTCACACTGCCTGACACTTaGAAACCACTTGGAAAGGGG +
Preference number: 4 (lower is better)
Translates to: DTTADAWRTLNRILKRIFTLPDT*KPLGKG
Trigger: CCCCTTTCCAAGTGGTTTTCAAGTGTCAGGCAGTGT...GAAGATTCTTTTCAAGATCCTGTTCAGGGTCCTCCAGGCATCAGCTGTTGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR TCA 90 bp ACAGAGGGCTGGGAGGCAACGGAAGTTTCGTTTGGCTGTTTGAGTCACCTTAGGTTTGCAACCAAATGTTaGAGACTGCTGCCTTTCCAT +
Preference number: 4 (lower is better)
Translates to: TEGWEATEVSFGCLSHLRFATKC*RLLPFH
Trigger: ATGGAAAGGCAGCAGTCTTCAACATTTGGTTGCAAA...CCTAAGGTGACTCAAACAGCCAAACGAAACTTCCGTTGCCTCCCAGCCCTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR TCA 90 bp AGAACAAAACCAGGTGGATACAGAGGGCTGGGAGGCAACGGAAGTTTCGTTTGGGGAGTCAGAATGTCCTaGATTTCCAAGCAAACTCAG +
Preference number: 4 (lower is better)
Translates to: RTKPGGYRGLGGNGSFVWGVRMS*ISKQTQ
Trigger: CTGAGTTTGCTTGGAAATTCAGGACATTCTGACTCC...CCAAACGAAACTTCCGTTGCCTCCCAGCCCTCTGTATCCACCTGGTTTTGTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR GCA 90 bp AGGAAGCAAGGGAAGAGGGTTATCTCTGCTGTGCAGGCAGTTGCCACTGGTCTCACTGATGAAACCACCTaGTCTCTTTATCCTCTTTCT +
Preference number: 4 (lower is better)
Translates to: RKQGKRVISAVQAVATGLTDETT*SLYPLS
Trigger: AGAAAGAGGATAAAGAGAGCAGGTGGTTTCATCAGT...GAGACCAGTGGCAACTGCCTGCACAGCAGAGATAACCCTCTTCCCTTGCTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
CDS-3UTR GCA 90 bp GCAGAAAACATGGGCTCAGAAGGACAAAGCATTCTCAGGACAGCTCTGTCTCTTGTCTCTCATTCTCTCTaGTTCTCGCAGTCCCCAAGA +
Preference number: 4 (lower is better)
Translates to: AENMGSEGQSILRTALSLVSHSL*FSQSPR
Trigger: TCTTGGGGACTGCGAGAAGCAGAGAGAATGAGAGAC...AAGAGACAGAGCTGTCCTGAGAATGCTTTGTCCTTCTGAGCCCATGTTTTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
CDS-3UTR GCA 90 bp GACTATTGGCAATTCGAACTCGAGCTAGCTAGGGAGTCTAGGAAGCCTTGGGTGCATACAGTTATAGGCTaGTGCTTCTCAGAACACTGC +
Preference number: 4 (lower is better)
Translates to: DYWQFELELARESRKPWVHTVIG*CFSEHC
Trigger: GCAGTGTTCTGAGAAGCAGCAGCCTATAACTGTATG...CACCCAAGGCTTCCTAGACTCCCTAGCTAGCTCGAGTTCGAATTGCCAATAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR GCA 90 bp GCAGAAAACATGGGCTCAGAAGGACAAAGCATTCTCAGGACAGCTCTGTCTCTTTTACTGTGTTGCAACTaGCAGGTCCCTTTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: AENMGSEGQSILRTALSLLLCCN*QVPLLP
Trigger: AGGCAGCAAAGGGACCTGGCAGTTGCAACACAGTAA...AAGAGACAGAGCTGTCCTGAGAATGCTTTGTCCTTCTGAGCCCATGTTTTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR GCA 90 bp GCACCTGGCTTCAAGGAACACACATACAGTTATAGGCTGCTGCTTCTCAGAACACCTGACTTACTGTGTTaGAACTGCCAGGTCCCTTTG +
Preference number: 4 (lower is better)
Translates to: APGFKEHTYSYRLLLLRTPDLLC*NCQVPL
Trigger: CAAAGGGACCTGGCAGTTGCAACACAGTAAGTCAGG...TGTTCTGAGAAGCAGCAGCCTATAACTGTATGTGTGTTCCTTGAAGCCAGGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR GCA 90 bp AGAACAAAACCAGGTGGATACAGAGGGCTGGGAGGCAACGGAAGTTTCGTTTGGTTCTCTCCTGGACACTaGTTTGGGAAAACTCTACAG +
Preference number: 4 (lower is better)
Translates to: RTKPGGYRGLGGNGSFVWFSPGH*FGKTLQ
Trigger: CTGTAGAGTTTTCCCAAAGCAGTGTCCAGGAGAGAA...CCAAACGAAACTTCCGTTGCCTCCCAGCCCTCTGTATCCACCTGGTTTTGTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR GCA 90 bp TCCCCTAACGTGGTTTCTTGGTCACGTAAGATGAAAAATCAGGGTATCTGTTGGGCAGCAGCAGAGCACTaGATTAATGGAGACCTGGGC +
Preference number: 4 (lower is better)
Translates to: SPNVVSWSRKMKNQGICWAAAEH*INGDLG
Trigger: GCCCAGGTCTCCATTAATGCAGTGCTCTGCTGCTGC...CCAACAGATACCCTGATTTTTCATCTTACGTGACCAAGAAACCACGTTAGGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR GCA 90 bp AGGGAAGAGGGTTATCTCTGCTGTGCAGGCAGTTGCCACTGGTCTCTCATTCTCCAATTCAGAGTTAATTaGCTTGGGGCAAGTTGGTCA +
Preference number: 4 (lower is better)
Translates to: REEGYLCCAGSCHWSLILQFRVN*LGASWS
Trigger: TGACCAACTTGCCCCAAGGCAATTAACTCTGAATTG...GAGAATGAGAGACCAGTGGCAACTGCCTGCACAGCAGAGATAACCCTCTTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR GCA 90 bp AGGGAAGAGGGTTATCTCTGCTGTGCAGGCAGTTGCCACTGGTCTCTCATTCTCTACAGTCTATGCCTTTaGTGCATGCTTGCTTTTTGG +
Preference number: 4 (lower is better)
Translates to: REEGYLCCAGSCHWSLILYSLCL*CMLAFW
Trigger: CCAAAAAGCAAGCATGCAGCAAAGGCATAGACTGTA...GAGAATGAGAGACCAGTGGCAACTGCCTGCACAGCAGAGATAACCCTCTTCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR GCA 90 bp AGAACAAAACCAGGTGGATACAGAGGGCTGGGAGGCAACGGAAGTTTCGTTTGGACAGTAATCTGCTTGTaGTCAATGTCCTCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: RTKPGGYRGLGGNGSFVWTVICL*SMSSEV
Trigger: AACCTCCGAGGACATTGAGCACAAGCAGATTACTGT...CCAAACGAAACTTCCGTTGCCTCCCAGCCCTCTGTATCCACCTGGTTTTGTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR GCA 90 bp AAGAAAGTTAAGTGCTTGGAGAAATCAAGACAGATTGCAGCCCTCCACATCTACCTACTGCTGCACCCTTaGACAGCTGCTGGCCCACTT +
Preference number: 4 (lower is better)
Translates to: KKVKCLEKSRQIAALHIYLLLHP*TAAGPL
Trigger: AAGTGGGCCAGCAGCTGTGCAAGGGTGCAGCAGTAG...GTAGATGTGGAGGGCTGCAATCTGTCTTGATTTCTCCAAGCACTTAACTTTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR CCA 90 bp GTCTGTCCTGTCCACTGTTACAAAGAGAGGACACAACAGCTGATGCCTGGAGGAACTGAGCAGAAAACATaGGCTCAGAAGGACAAAGCA +
Preference number: 4 (lower is better)
Translates to: VCPVHCYKERTQQLMPGGTEQKT*AQKDKA
Trigger: TGCTTTGTCCTTCTGAGCCCATGTTTTCTGCTCAGT...TCCTCCAGGCATCAGCTGTTGTGTCCTCTCTTTGTAACAGTGGACAGGACAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
CDS-3UTR CCA 90 bp TGGGTGGTCTGTCCTGTCCACTGTTACAAAGAGAGGACACAACAGCTGATGCCTACTGAGCAGAAAACATaGGCTCAGAAGGACAAAGCA +
Preference number: 4 (lower is better)
Translates to: WVVCPVHCYKERTQQLMPTEQKT*AQKDKA
Trigger: TGCTTTGTCCTTCTGAGCCCATGTTTTCTGCTCAGT...AGGCATCAGCTGTTGTGTCCTCTCTTTGTAACAGTGGACAGGACAGACCACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
CDS-3UTR CCA 90 bp CAGTTTCTTAACTACATTGGCCAAGGGCACCCTCTGTTCGTCACTGATTATAGACCAGTTCCACATGGCTaGGGAGGCCTCAGAATCATG +
Preference number: 4 (lower is better)
Translates to: QFLNYIGQGHPLFVTDYRPVPHG*GGLRIM
Trigger: CATGATTCTGAGGCCTCCCCAGCCATGTGGAACTGG...TCTATAATCAGTGACGAACAGAGGGTGCCCTTGGCCAATGTAGTTAAGAAACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464260.5
CDS-3UTR CCA 90 bp AGTAAACCATTCCAAATCTGCTTCCAAGCTGCTACTGAGCAGAAAACATGGGCTCCAAGCTGCAGTAGCTaGGAACTCTGCACCTGGCTT +
Preference number: 4 (lower is better)
Translates to: SKPFQICFQAATEQKTWAPSCSS*ELCTWL
Trigger: AAGCCAGGTGCAGAGTTCCCAGCTACTGCAGCTTGG...AGCCCATGTTTTCTGCTCAGTAGCAGCTTGGAAGCAGATTTGGAATGGTTTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR CCA 90 bp AGAACAAAACCAGGTGGATACAGAGGGCTGGGAGGCAACGGAAGTTTCGTTTGGGGTCTCAGAAGCACATaGCCATTCCTGTCTTCATTT +
Preference number: 4 (lower is better)
Translates to: RTKPGGYRGLGGNGSFVWGLRST*PFLSSF
Trigger: AAATGAAGACAGGAATGGCCATGTGCTTCTGAGACC...CCAAACGAAACTTCCGTTGCCTCCCAGCCCTCTGTATCCACCTGGTTTTGTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR CCA 90 bp GACTATTGGCAATTCGAACTCGAGCTAGCTAGGGAGTCTAGGAAGCCTTGGGTGTGCATGCTTGCTTTTTaGTGGAGCTTTGAACAGGGA +
Preference number: 4 (lower is better)
Translates to: DYWQFELELARESRKPWVCMLAF*WSFEQG
Trigger: TCCCTGTTCAAAGCTCCACCAAAAAGCAAGCATGCA...CACCCAAGGCTTCCTAGACTCCCTAGCTAGCTCGAGTTCGAATTGCCAATAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR CCA 90 bp AAGAAAGTTAAGTGCTTGGAGAAATCAAGACAGATTGCAGCCCTCCACATCTACATCCCTCTCCTGAAGTaGCAGCGAGTAACCCGGGCA +
Preference number: 4 (lower is better)
Translates to: KKVKCLEKSRQIAALHIYIPLLK*QRVTRA
Trigger: TGCCCGGGTTACTCGCTGCCACTTCAGGAGAGGGAT...GTAGATGTGGAGGGCTGCAATCTGTCTTGATTTCTCCAAGCACTTAACTTTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR CCA 90 bp AACCACAAATGCTCACAGGGAAAGAACAAAACCAGGTGGATACAGAGGGCTGGGGAAGATACTCAGTTCTaGGCTGTCTTTGGGGGCATA +
Preference number: 4 (lower is better)
Translates to: NHKCSQGKNKTRWIQRAGEDTQF*AVFGGI
Trigger: TATGCCCCCAAAGACAGCCCAGAACTGAGTATCTTC...CCCAGCCCTCTGTATCCACCTGGTTTTGTTCTTTCCCTGTGAGCATTTGTGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR TCA 90 bp ACAGAGGGCTGGGAGGCAACGGAAGTTTCGTTTGGCTGTTTGAGTCACCTTAGGCATTTCTCGGTCAATTaGCAAAATCTGCTGTTCAAG +
Preference number: 4 (lower is better)
Translates to: TEGWEATEVSFGCLSHLRHFSVN*QNLLFK
Trigger: CTTGAACAGCAGATTTTGTCAATTGACCGAGAAATG...CCTAAGGTGACTCAAACAGCCAAACGAAACTTCCGTTGCCTCCCAGCCCTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR TCA 90 bp GTCTGTCCTGTCCACTGTTACAAAGAGAGGACACAACAGCTGATGCCTGGAGGAAAGAGACCAGTGTGTTaGAAGTCCTTTAGTCTAAGG +
Preference number: 4 (lower is better)
Translates to: VCPVHCYKERTQQLMPGGKRPVC*KSFSLR
Trigger: CCTTAGACTAAAGGACTTTCAACACACTGGTCTCTT...TCCTCCAGGCATCAGCTGTTGTGTCCTCTCTTTGTAACAGTGGACAGGACAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
CDS-3UTR TCA 90 bp TGGGTGGTCTGTCCTGTCCACTGTTACAAAGAGAGGACACAACAGCTGATGCCTCTTAGGCAAAGAGAGTaGCCCAGCATTTTCTCTAAA +
Preference number: 4 (lower is better)
Translates to: WVVCPVHCYKERTQQLMPLRQRE*PSIFSK
Trigger: TTTAGAGAAAATGCTGGGTCACTCTCTTTGCCTAAG...AGGCATCAGCTGTTGTGTCCTCTCTTTGTAACAGTGGACAGGACAGACCACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR TCA 90 bp GGGATTCCATGTCTGGGGTGGATGATCCTAATTACAACTCCCACACTTTTCACTCCACGTTGTGGTTCTTaGACTCCCAGGTCTTGGAAA +
Preference number: 4 (lower is better)
Translates to: GIPCLGWMILITTPTLFTPRCGS*TPRSWK
Trigger: TTTCCAAGACCTGGGAGTTCAAGAACCACAACGTGG...AGTGAAAAGTGTGGGAGTTGTAATTAGGATCATCCACCCCAGACATGGAATCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR TCA 90 bp ACAGAGGGCTGGGAGGCAACGGAAGTTTCGTTTGGCTGTTTGAGTCACCTTAGGAGTCAGCTTCATATATaGAAGGCTCATGCTTCTAAG +
Preference number: 4 (lower is better)
Translates to: TEGWEATEVSFGCLSHLRSQLHI*KAHASK
Trigger: CTTAGAAGCATGAGCCTTTCATATATGAAGCTGACT...CCTAAGGTGACTCAAACAGCCAAACGAAACTTCCGTTGCCTCCCAGCCCTCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR GCA 90 bp ACAGAGGGCTGGGAGGCAACGGAAGTTTCGTTTGGCTGTTTGAGTCACCTTAGGCTTGATGAATCGAACTaGTTCTTCATTGCTGAAAGC +
Preference number: 4 (lower is better)
Translates to: TEGWEATEVSFGCLSHLRLDESN*FFIAES
Trigger: GCTTTCAGCAATGAAGAAGCAGTTCGATTCATCAAG...CCTAAGGTGACTCAAACAGCCAAACGAAACTTCCGTTGCCTCCCAGCCCTCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR GCA 90 bp TGGGTGGTCTGTCCTGTCCACTGTTACAAAGAGAGGACACAACAGCTGATGCCTAAACCATTCCAAATCTaGTTCCAAGCTGCTACTGAG +
Preference number: 4 (lower is better)
Translates to: WVVCPVHCYKERTQQLMPKPFQI*FQAATE
Trigger: CTCAGTAGCAGCTTGGAAGCAGATTTGGAATGGTTT...AGGCATCAGCTGTTGTGTCCTCTCTTTGTAACAGTGGACAGGACAGACCACCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
CDS-3UTR GCA 90 bp TCCCCTAACGTGGTTTCTTGGTCACGTAAGATGAAAAATCAGGGTATCTGTTGGTGCTGTGCAGGCAGTTaGCACTGGTCTCTCATTCTC +
Preference number: 4 (lower is better)
Translates to: SPNVVSWSRKMKNQGICWCCAGS*HWSLIL
Trigger: GAGAATGAGAGACCAGTGGCAACTGCCTGCACAGCA...CCAACAGATACCCTGATTTTTCATCTTACGTGACCAAGAAACCACGTTAGGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR GCA 90 bp CAGTTTCTTAACTACATTGGCCAAGGGCACCCTCTGTTCGTCACTGATTATAGATGCTGTGCAGGCAGTTaGCACTGGTCTCTCATTCTC +
Preference number: 4 (lower is better)
Translates to: QFLNYIGQGHPLFVTDYRCCAGS*HWSLIL
Trigger: GAGAATGAGAGACCAGTGGCAACTGCCTGCACAGCA...TCTATAATCAGTGACGAACAGAGGGTGCCCTTGGCCAATGTAGTTAAGAAACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
CDS-3UTR GCA 90 bp TCCCCTAACGTGGTTTCTTGGTCACGTAAGATGAAAAATCAGGGTATCTGTTGGGAAGAGGGTTATCTCTaGTGTGCAGGCAGTTGCCAC +
Preference number: 4 (lower is better)
Translates to: SPNVVSWSRKMKNQGICWEEGYL*CAGSCH
Trigger: GTGGCAACTGCCTGCACAGCAGAGATAACCCTCTTC...CCAACAGATACCCTGATTTTTCATCTTACGTGACCAAGAAACCACGTTAGGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR GCA 90 bp CACTCCTTTCTCAATGCAAACAGCTTACTTGCCAGGGAACACTGTGACTCATTCAGTAGCTGGGAACTCTaGACCTGGCTTCAAGGAACA +
Preference number: 4 (lower is better)
Translates to: HSFLNANSLLAREHCDSFSSWEL*TWLQGT
Trigger: TGTTCCTTGAAGCCAGGTGCAGAGTTCCCAGCTACT...GAATGAGTCACAGTGTTCCCTGGCAAGTAAGCTGTTTGCATTGAGAAAGGAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR GCA 90 bp CTCAGTCCACAGCAAGGAATAAAATGCAGCCACTGGTTACCAGTACTATGTACACACCAAATCCCAAGCTaGAGTAGCTGGGAACTCTGC +
Preference number: 4 (lower is better)
Translates to: LSPQQGIKCSHWLPVLCTHQIPS*SSWELC
Trigger: GCAGAGTTCCCAGCTACTGCAGCTTGGGATTTGGTG...TGTACATAGTACTGGTAACCAGTGGCTGCATTTTATTCCTTGCTGTGGACTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR GCA 90 bp ACAGAGGGCTGGGAGGCAACGGAAGTTTCGTTTGGCTGTTTGAGTCACCTTAGGAAGTTATGTAACTCGTaGACTCAGCACCATCTGTTA +
Preference number: 4 (lower is better)
Translates to: TEGWEATEVSFGCLSHLRKLCNS*TQHHLL
Trigger: TAACAGATGGTGCTGAGTGCACGAGTTACATAACTT...CCTAAGGTGACTCAAACAGCCAAACGAAACTTCCGTTGCCTCCCAGCCCTCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR GCA 90 bp CAAAATAGTAAACCATTCCAAATCTGCTTCCAAGCTGCTACTGAGCAGAAAACACTGCCCCCTGCCCTTTaGAATCCGCCACCTAGCCTA +
Preference number: 4 (lower is better)
Translates to: QNSKPFQICFQAATEQKTLPPAL*NPPPSL
Trigger: TAGGCTAGGTGGCGGATTGCAAAGGGCAGGGGGCAG...TGTTTTCTGCTCAGTAGCAGCTTGGAAGCAGATTTGGAATGGTTTACTATTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR CCA 90 bp CCATGTCTGGGGTGGATGATCCTAATTACAACTCCCACACTTTTCACTAAATTATCACAGGTGACGCAGTaGCCTGTCTCCTGCAGCACT +
Preference number: 4 (lower is better)
Translates to: PCLGWMILITTPTLFTKLSQVTQ*PVSCST
Trigger: AGTGCTGCAGGAGACAGGCCACTGCGTCACCTGTGA...TAATTTAGTGAAAAGTGTGGGAGTTGTAATTAGGATCATCCACCCCAGACATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
CDS-3UTR CCA 90 bp GACACAACAGCTGATGCCTGGAGGACCCTGAACAGGATCTTGAAAAGAATCTTCTCCTGGACACTGCTTTaGGAAAACTCTACAGCAGCA +
Preference number: 4 (lower is better)
Translates to: DTTADAWRTLNRILKRIFSWTLL*ENSTAA
Trigger: TGCTGCTGTAGAGTTTTCCCAAAGCAGTGTCCAGGA...GAAGATTCTTTTCAAGATCCTGTTCAGGGTCCTCCAGGCATCAGCTGTTGTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR CCA 90 bp ACTGAGCAGAAAACATGGGCTCAGAAGGACAAAGCATTCTCAGGACAGCTCTGTTCCTGGACACTGCTTTaGGAAAACTCTACAGCAGCA +
Preference number: 4 (lower is better)
Translates to: TEQKTWAQKDKAFSGQLCSWTLL*ENSTAA
Trigger: TGCTGCTGTAGAGTTTTCCCAAAGCAGTGTCCAGGA...ACAGAGCTGTCCTGAGAATGCTTTGTCCTTCTGAGCCCATGTTTTCTGCTCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR CCA 90 bp AGTAAACCATTCCAAATCTGCTTCCAAGCTGCTACTGAGCAGAAAACATGGGCTCAGTTTGATGGTGGGTaGGGGCAACTCTTAGGAGTC +
Preference number: 4 (lower is better)
Translates to: SKPFQICFQAATEQKTWAQFDGG*GQLLGV
Trigger: GACTCCTAAGAGTTGCCCCCACCCACCATCAAACTG...AGCCCATGTTTTCTGCTCAGTAGCAGCTTGGAAGCAGATTTGGAATGGTTTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR CCA 90 bp AGAACAAAACCAGGTGGATACAGAGGGCTGGGAGGCAACGGAAGTTTCGTTTGGCAAAATTTGGCACCATaGGGACTATTGGCAATTCGA +
Preference number: 4 (lower is better)
Translates to: RTKPGGYRGLGGNGSFVWQNLAP*GLLAIR
Trigger: TCGAATTGCCAATAGTCCCCATGGTGCCAAATTTTG...CCAAACGAAACTTCCGTTGCCTCCCAGCCCTCTGTATCCACCTGGTTTTGTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR CCA 90 bp AGGGAAGAGGGTTATCTCTGCTGTGCAGGCAGTTGCCACTGGTCTCTCATTCTCGTTGCAAGAGAGATCTaGCAACAACTTAGAGAACAA +
Preference number: 4 (lower is better)
Translates to: REEGYLCCAGSCHWSLILVAREI*QQLREQ
Trigger: TTGTTCTCTAAGTTGTTGCCAGATCTCTCTTGCAAC...GAGAATGAGAGACCAGTGGCAACTGCCTGCACAGCAGAGATAACCCTCTTCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR CCA 90 bp ACCACAAATGCTCACAGGGAAAGAACAAAACCAGGTGGATACAGAGGGCTGGGATCATTTCTCCAGAGCTaGATGACAAATGCTGGTGTG +
Preference number: 4 (lower is better)
Translates to: TTNAHRERTKPGGYRGLGSFLQS*MTNAGV
Trigger: CACACCAGCATTTGTCATCCAGCTCTGGAGAAATGA...TCCCAGCCCTCTGTATCCACCTGGTTTTGTTCTTTCCCTGTGAGCATTTGTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR CCA 90 bp CTCAGTCCACAGCAAGGAATAAAATGCAGCCACTGGTTACCAGTACTATGTACAAAAATTAGCCAGGTGTaGTGGAGGCCGCCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: LSPQQGIKCSHWLPVLCTKISQV*WRPPVV
Trigger: GACTACAGGCGGCCTCCACCACACCTGGCTAATTTT...TGTACATAGTACTGGTAACCAGTGGCTGCATTTTATTCCTTGCTGTGGACTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR CCA 90 bp CACTCCTTTCTCAATGCAAACAGCTTACTTGCCAGGGAACACTGTGACTCATTCAAGATCTGGACAACCTaGCTTTCACCAGCCTACTGC +
Preference number: 4 (lower is better)
Translates to: HSFLNANSLLAREHCDSFKIWTT*LSPAYC
Trigger: GCAGTAGGCTGGTGAAAGCCAGGTTGTCCAGATCTT...GAATGAGTCACAGTGTTCCCTGGCAAGTAAGCTGTTTGCATTGAGAAAGGAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR TCA 90 bp GCAGAAAACATGGGCTCAGAAGGACAAAGCATTCTCAGGACAGCTCTGTCTCTTTTCAGCTGCAGTTGTTaGAAAAGCAGGCATGTTCTG +
Preference number: 4 (lower is better)
Translates to: AENMGSEGQSILRTALSLFSCSC*KSRHVL
Trigger: CAGAACATGCCTGCTTTTTCAACAACTGCAGCTGAA...AAGAGACAGAGCTGTCCTGAGAATGCTTTGTCCTTCTGAGCCCATGTTTTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000295839.9
CDS-3UTR TCA 90 bp TGGGTGGTCTGTCCTGTCCACTGTTACAAAGAGAGGACACAACAGCTGATGCCTATTTTGGACACTGGATaGAAGAGTTGGGAAAACATG +
Preference number: 4 (lower is better)
Translates to: WVVCPVHCYKERTQQLMPILDTG*KSWENM
Trigger: CATGTTTTCCCAACTCTTTCATCCAGTGTCCAAAAT...AGGCATCAGCTGTTGTGTCCTCTCTTTGTAACAGTGGACAGGACAGACCACCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
CDS-3UTR TCA 90 bp TCTGTTGGTGAATTTAACAGCTGCCTATTACATATGGTAAGGACTAAGCAAAAGCTGACCACTCACAGGTaGCGCAGTGGCCTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: SVGEFNSCLLHMVRTKQKLTTHR*RSGLSP
Trigger: AGGAGACAGGCCACTGCGTCACCTGTGAGTGGTCAG...CTTTTGCTTAGTCCTTACCATATGTAATAGGCAGCTGTTAAATTCACCAACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR TCA 90 bp TGGGTGGTCTGTCCTGTCCACTGTTACAAAGAGAGGACACAACAGCTGATGCCTCTTGGTCACGTAAGATaGAAAATCAGGGTATCTGTT +
Preference number: 4 (lower is better)
Translates to: WVVCPVHCYKERTQQLMPLGHVR*KIRVSV
Trigger: AACAGATACCCTGATTTTTCATCTTACGTGACCAAG...AGGCATCAGCTGTTGTGTCCTCTCTTTGTAACAGTGGACAGGACAGACCACCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR TCA 90 bp ACTGAGCAGAAAACATGGGCTCAGAAGGACAAAGCATTCTCAGGACAGCTCTGTTCACGCTTGAATTCCTaGCTTACTGTGTTGCAACTG +
Preference number: 4 (lower is better)
Translates to: TEQKTWAQKDKAFSGQLCSRLNS*LTVLQL
Trigger: CAGTTGCAACACAGTAAGTCAGGAATTCAAGCGTGA...ACAGAGCTGTCCTGAGAATGCTTTGTCCTTCTGAGCCCATGTTTTCTGCTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR TCA 90 bp GCACCTGGCTTCAAGGAACACACATACAGTTATAGGCTGCTGCTTCTCAGAACACTTCTGCAGTTTGCTTaGGTGTTGGCAAGAAATTCC +
Preference number: 4 (lower is better)
Translates to: APGFKEHTYSYRLLLLRTLLQFA*VLARNS
Trigger: GGAATTTCTTGCCAACACTCAAGCAAACTGCAGAAG...TGTTCTGAGAAGCAGCAGCCTATAACTGTATGTGTGTTCCTTGAAGCCAGGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR TCA 90 bp ACAGAGGGCTGGGAGGCAACGGAAGTTTCGTTTGGCTGTTTGAGTCACCTTAGGTCCATCCTTAATAACTaGGCTCCATCTATGGTTTTA +
Preference number: 4 (lower is better)
Translates to: TEGWEATEVSFGCLSHLRSILNN*APSMVL
Trigger: TAAAACCATAGATGGAGCTCAGTTATTAAGGATGGA...CCTAAGGTGACTCAAACAGCCAAACGAAACTTCCGTTGCCTCCCAGCCCTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR GCA 90 bp AACCACAAATGCTCACAGGGAAAGAACAAAACCAGGTGGATACAGAGGGCTGGGAAACCATTCCAAATCTaGTTCCAAGCTGCTACTGAG +
Preference number: 4 (lower is better)
Translates to: NHKCSQGKNKTRWIQRAGKPFQI*FQAATE
Trigger: CTCAGTAGCAGCTTGGAAGCAGATTTGGAATGGTTT...CCCAGCCCTCTGTATCCACCTGGTTTTGTTCTTTCCCTGTGAGCATTTGTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR GCA 90 bp AGTAAACCATTCCAAATCTGCTTCCAAGCTGCTACTGAGCAGAAAACATGGGCTGTCTCTCATTCTCTCTaGTTCTCGCAGTCCCCAAGA +
Preference number: 4 (lower is better)
Translates to: SKPFQICFQAATEQKTWAVSHSL*FSQSPR
Trigger: TCTTGGGGACTGCGAGAAGCAGAGAGAATGAGAGAC...AGCCCATGTTTTCTGCTCAGTAGCAGCTTGGAAGCAGATTTGGAATGGTTTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
CDS-3UTR GCA 90 bp ATCCTAATTACAACTCCCACACTTTTCACTAAATTAAAAGAGACCAGTGTGTTGACTGCCAGGTCCCTTTaGTGCCTCCCCTGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: ILITTPTLFTKLKETSVLTARSL*CLPCRP
Trigger: AGGCCTGCAGGGGAGGCAGCAAAGGGACCTGGCAGT...CAACACACTGGTCTCTTTTAATTTAGTGAAAAGTGTGGGAGTTGTAATTAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR GCA 90 bp TCCCCTAACGTGGTTTCTTGGTCACGTAAGATGAAAAATCAGGGTATCTGTTGGCCTGACTTACTGTGTTaGAACTGCCAGGTCCCTTTG +
Preference number: 4 (lower is better)
Translates to: SPNVVSWSRKMKNQGICWPDLLC*NCQVPL
Trigger: CAAAGGGACCTGGCAGTTGCAACACAGTAAGTCAGG...CCAACAGATACCCTGATTTTTCATCTTACGTGACCAAGAAACCACGTTAGGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR GCA 90 bp GCACCTGGCTTCAAGGAACACACATACAGTTATAGGCTGCTGCTTCTCAGAACATTCTCTCCTGGACACTaGTTTGGGAAAACTCTACAG +
Preference number: 4 (lower is better)
Translates to: APGFKEHTYSYRLLLLRTFSPGH*FGKTLQ
Trigger: CTGTAGAGTTTTCCCAAAGCAGTGTCCAGGAGAGAA...TGTTCTGAGAAGCAGCAGCCTATAACTGTATGTGTGTTCCTTGAAGCCAGGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR GCA 90 bp GGGATTCCATGTCTGGGGTGGATGATCCTAATTACAACTCCCACACTTTTCACTGAGCTGGATGACAAATaGTGGTGTGACATGCTAAGG +
Preference number: 4 (lower is better)
Translates to: GIPCLGWMILITTPTLFTELDDK*WCDMLR
Trigger: CCTTAGCATGTCACACCAGCATTTGTCATCCAGCTC...AGTGAAAAGTGTGGGAGTTGTAATTAGGATCATCCACCCCAGACATGGAATCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR GCA 90 bp GACTATTGGCAATTCGAACTCGAGCTAGCTAGGGAGTCTAGGAAGCCTTGGGTGTCAGAGGAGTATTCTTaGTTAATGTCCCATGGTTCT +
Preference number: 4 (lower is better)
Translates to: DYWQFELELARESRKPWVSEEYS*LMSHGS
Trigger: AGAACCATGGGACATTAAGCAAGAATACTCCTCTGA...CACCCAAGGCTTCCTAGACTCCCTAGCTAGCTCGAGTTCGAATTGCCAATAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR CCA 90 bp ATCCTAATTACAACTCCCACACTTTTCACTAAATTAAAAGAGACCAGTGTGTTGCCAGGGACCGAGACATaGCCAGGATTCCCTGGACCC +
Preference number: 4 (lower is better)
Translates to: ILITTPTLFTKLKETSVLPGTET*PGFPGP
Trigger: GGGTCCAGGGAATCCTGGCCATGTCTCGGTCCCTGG...CAACACACTGGTCTCTTTTAATTTAGTGAAAAGTGTGGGAGTTGTAATTAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
CDS-3UTR CCA 90 bp CAAAATAGTAAACCATTCCAAATCTGCTTCCAAGCTGCTACTGAGCAGAAAACATGTCTCCTGCAGCACTaGGTGGTCTGTCCTGTCCAC +
Preference number: 4 (lower is better)
Translates to: QNSKPFQICFQAATEQKTCLLQH*VVCPVH
Trigger: GTGGACAGGACAGACCACCCAGTGCTGCAGGAGACA...TGTTTTCTGCTCAGTAGCAGCTTGGAAGCAGATTTGGAATGGTTTACTATTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
CDS-3UTR CCA 90 bp ACTGAGCAGAAAACATGGGCTCAGAAGGACAAAGCATTCTCAGGACAGCTCTGTGAAAGCTCCCTGATGTaGATGGAGATTTGCAACCAA +
Preference number: 4 (lower is better)
Translates to: TEQKTWAQKDKAFSGQLCESSLM*MEICNQ
Trigger: TTGGTTGCAAATCTCCATCCACATCAGGGAGCTTTC...ACAGAGCTGTCCTGAGAATGCTTTGTCCTTCTGAGCCCATGTTTTCTGCTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR CCA 90 bp AACCACAAATGCTCACAGGGAAAGAACAAAACCAGGTGGATACAGAGGGCTGGGTCTCAAATTCTCTCCTaGACACTGCTTTGGGAAAAC +
Preference number: 4 (lower is better)
Translates to: NHKCSQGKNKTRWIQRAGSQILS*TLLWEN
Trigger: GTTTTCCCAAAGCAGTGTCCAGGAGAGAATTTGAGA...CCCAGCCCTCTGTATCCACCTGGTTTTGTTCTTTCCCTGTGAGCATTTGTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR CCA 90 bp CAAAATAGTAAACCATTCCAAATCTGCTTCCAAGCTGCTACTGAGCAGAAAACATCACGGCGTCCCGGCTaGACTTCACGATGGTCTTCA +
Preference number: 4 (lower is better)
Translates to: QNSKPFQICFQAATEQKTSRRPG*TSRWSS
Trigger: TGAAGACCATCGTGAAGTCCAGCCGGGACGCCGTGA...TGTTTTCTGCTCAGTAGCAGCTTGGAAGCAGATTTGGAATGGTTTACTATTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR CCA 90 bp AGGGAAGAGGGTTATCTCTGCTGTGCAGGCAGTTGCCACTGGTCTCTCATTCTCATAAAATGCAGCCACTaGTTACCAGTACTATGTACA +
Preference number: 4 (lower is better)
Translates to: REEGYLCCAGSCHWSLILIKCSH*LPVLCT
Trigger: TGTACATAGTACTGGTAACCAGTGGCTGCATTTTAT...GAGAATGAGAGACCAGTGGCAACTGCCTGCACAGCAGAGATAACCCTCTTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498165.6
3UTR CAA 72 bp CCACAATCTGCCACCAGTGCCCTTACAGTAATCTGCTaGTGCTCAATGTCCTCGGAGGTTTTTGAGATTAAC +
Preference number: 4 (lower is better)
Translates to: PQSATSALTVIC*CSMSSEVFEIN
Trigger: GTTAATCTCAAAAACCTCCGAGGACATTGAGCACAAGCAGATTACTGTAAGGGCACTGGTGGCAGATTGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR TCA 90 bp TCCCCTAACGTGGTTTCTTGGTCACGTAAGATGAAAAATCAGGGTATCTGTTGGATCCCAGAGACCATCTaGTGCCAAGATCATGAACTC +
Preference number: 4 (lower is better)
Translates to: SPNVVSWSRKMKNQGICWIPETI*CQDHEL
Trigger: GAGTTCATGATCTTGGCATCAGATGGTCTCTGGGAT...CCAACAGATACCCTGATTTTTCATCTTACGTGACCAAGAAACCACGTTAGGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR TCA 90 bp ACTGAGCAGAAAACATGGGCTCAGAAGGACAAAGCATTCTCAGGACAGCTCTGTAAGAGACCAGTGTGTTaGAAGTCCTTTAGTCTAAGG +
Preference number: 4 (lower is better)
Translates to: TEQKTWAQKDKAFSGQLCKRPVC*KSFSLR
Trigger: CCTTAGACTAAAGGACTTTCAACACACTGGTCTCTT...ACAGAGCTGTCCTGAGAATGCTTTGTCCTTCTGAGCCCATGTTTTCTGCTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
CDS-3UTR TCA 90 bp ACTACATTGGCCAAGGGCACCCTCTGTTCGTCACTGATTATAGACCTAAGACCAACACAGACCTTTCATTaGCACAGTTGCAAGAGAGAT +
Preference number: 4 (lower is better)
Translates to: TTLAKGTLCSSLIIDLRPTQTFH*HSCKRD
Trigger: ATCTCTCTTGCAACTGTGTCAATGAAAGGTCTGTGT...TGGTCTTAGGTCTATAATCAGTGACGAACAGAGGGTGCCCTTGGCCAATGTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR TCA 90 bp ACTGAGCAGAAAACATGGGCTCAGAAGGACAAAGCATTCTCAGGACAGCTCTGTGTTCTGCTATCAATATaGGGCTGCTGTTGGTCATAT +
Preference number: 4 (lower is better)
Translates to: TEQKTWAQKDKAFSGQLCVLLSI*GCCWSY
Trigger: ATATGACCAACAGCAGCCTCATATTGATAGCAGAAC...ACAGAGCTGTCCTGAGAATGCTTTGTCCTTCTGAGCCCATGTTTTCTGCTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR TCA 90 bp ACTACATTGGCCAAGGGCACCCTCTGTTCGTCACTGATTATAGACCTAAGACCAAAAGGTAATGAGAGCTaGTACAATCCCTCTCCTGAA +
Preference number: 4 (lower is better)
Translates to: TTLAKGTLCSSLIIDLRPKGNES*YNPSPE
Trigger: TTCAGGAGAGGGATTGTATCAGCTCTCATTACCTTT...TGGTCTTAGGTCTATAATCAGTGACGAACAGAGGGTGCCCTTGGCCAATGTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR TCA 90 bp AGTAAACCATTCCAAATCTGCTTCCAAGCTGCTACTGAGCAGAAAACATGGGCTCCACGATTTGGAACGTaGATGGAATCTGGGACAGTA +
Preference number: 4 (lower is better)
Translates to: SKPFQICFQAATEQKTWAPRFGT*MESGTV
Trigger: TACTGTCCCAGATTCCATTCACGTTCCAAATCGTGG...AGCCCATGTTTTCTGCTCAGTAGCAGCTTGGAAGCAGATTTGGAATGGTTTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR GCA 90 bp CAAAATAGTAAACCATTCCAAATCTGCTTCCAAGCTGCTACTGAGCAGAAAACAGGGTTATCTCTGCTGTaGAGGCAGTTGCCACTGGTC +
Preference number: 4 (lower is better)
Translates to: QNSKPFQICFQAATEQKTGLSLL*RQLPLV
Trigger: GACCAGTGGCAACTGCCTGCACAGCAGAGATAACCC...TGTTTTCTGCTCAGTAGCAGCTTGGAAGCAGATTTGGAATGGTTTACTATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
CDS-3UTR GCA 90 bp GCACCTGGCTTCAAGGAACACACATACAGTTATAGGCTGCTGCTTCTCAGAACATCACTCCTTTCTCAATaGAAACAGCTTACTTGCCAG +
Preference number: 4 (lower is better)
Translates to: APGFKEHTYSYRLLLLRTSLLSQ*KQLTCQ
Trigger: CTGGCAAGTAAGCTGTTTGCATTGAGAAAGGAGTGA...TGTTCTGAGAAGCAGCAGCCTATAACTGTATGTGTGTTCCTTGAAGCCAGGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR GCA 90 bp CTCAGTCCACAGCAAGGAATAAAATGCAGCCACTGGTTACCAGTACTATGTACAACAGTTATAGGCTGCTaGTTCTCAGAACACTGCCTG +
Preference number: 4 (lower is better)
Translates to: LSPQQGIKCSHWLPVLCTTVIGC*FSEHCL
Trigger: CAGGCAGTGTTCTGAGAAGCAGCAGCCTATAACTGT...TGTACATAGTACTGGTAACCAGTGGCTGCATTTTATTCCTTGCTGTGGACTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR GCA 90 bp CACTCCTTTCTCAATGCAAACAGCTTACTTGCCAGGGAACACTGTGACTCATTCCATACAGTTATAGGCTaGTGCTTCTCAGAACACTGC +
Preference number: 4 (lower is better)
Translates to: HSFLNANSLLAREHCDSFHTVIG*CFSEHC
Trigger: GCAGTGTTCTGAGAAGCAGCAGCCTATAACTGTATG...GAATGAGTCACAGTGTTCCCTGGCAAGTAAGCTGTTTGCATTGAGAAAGGAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR GCA 90 bp ACAGAGGGCTGGGAGGCAACGGAAGTTTCGTTTGGCTGTTTGAGTCACCTTAGGCATTATTCTACTTTCTaGACACTGTATATGCTTGAG +
Preference number: 4 (lower is better)
Translates to: TEGWEATEVSFGCLSHLRHYSTF*TLYMLE
Trigger: CTCAAGCATATACAGTGTGCAGAAAGTAGAATAATG...CCTAAGGTGACTCAAACAGCCAAACGAAACTTCCGTTGCCTCCCAGCCCTCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR CCA 90 bp CAAAATAGTAAACCATTCCAAATCTGCTTCCAAGCTGCTACTGAGCAGAAAACATCCTGCAGCACTGGGTaGTCTGTCCTGTCCACTGTT +
Preference number: 4 (lower is better)
Translates to: QNSKPFQICFQAATEQKTSCSTG*SVLSTV
Trigger: AACAGTGGACAGGACAGACCACCCAGTGCTGCAGGA...TGTTTTCTGCTCAGTAGCAGCTTGGAAGCAGATTTGGAATGGTTTACTATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
CDS-3UTR CCA 90 bp ACAGAGGGCTGGGAGGCAACGGAAGTTTCGTTTGGCTGTTTGAGTCACCTTAGGAAATGGAAGGAATCATaGTATTGTGGCTTGCTTTTT +
Preference number: 4 (lower is better)
Translates to: TEGWEATEVSFGCLSHLRKWKES*YCGLLF
Trigger: AAAAAGCAAGCCACAATACCATGATTCCTTCCATTT...CCTAAGGTGACTCAAACAGCCAAACGAAACTTCCGTTGCCTCCCAGCCCTCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR CCA 90 bp CAGTTTCTTAACTACATTGGCCAAGGGCACCCTCTGTTCGTCACTGATTATAGATGGGAACTCTGCACCTaGCTTCAAGGAACACACATA +
Preference number: 4 (lower is better)
Translates to: QFLNYIGQGHPLFVTDYRWELCT*LQGTHI
Trigger: TATGTGTGTTCCTTGAAGCCAGGTGCAGAGTTCCCA...TCTATAATCAGTGACGAACAGAGGGTGCCCTTGGCCAATGTAGTTAAGAAACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR CCA 90 bp AGGGAAGAGGGTTATCTCTGCTGTGCAGGCAGTTGCCACTGGTCTCTCATTCTCAAAAATAAAGAAAGTTaGCTATGGGCTGTAAAGTGC +
Preference number: 4 (lower is better)
Translates to: REEGYLCCAGSCHWSLILKNKES*LWAVKC
Trigger: GCACTTTACAGCCCATAGCCAACTTTCTTTATTTTT...GAGAATGAGAGACCAGTGGCAACTGCCTGCACAGCAGAGATAACCCTCTTCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR CCA 90 bp ATCCTAATTACAACTCCCACACTTTTCACTAAATTAAAAGAGACCAGTGTGTTGGGCCTGGCATCGTGCTaGGGTCTCAGAAGCACATGG +
Preference number: 4 (lower is better)
Translates to: ILITTPTLFTKLKETSVLGLASC*GLRSTW
Trigger: CCATGTGCTTCTGAGACCCCAGCACGATGCCAGGCC...CAACACACTGGTCTCTTTTAATTTAGTGAAAAGTGTGGGAGTTGTAATTAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR CCA 90 bp GTCTGTCCTGTCCACTGTTACAAAGAGAGGACACAACAGCTGATGCCTGGAGGAAATAAAAATAGGCCATaGAGAGATGTTCTTGCTCCT +
Preference number: 4 (lower is better)
Translates to: VCPVHCYKERTQQLMPGGNKNRP*RDVLAP
Trigger: AGGAGCAAGAACATCTCTCCATGGCCTATTTTTATT...TCCTCCAGGCATCAGCTGTTGTGTCCTCTCTTTGTAACAGTGGACAGGACAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR TCA 90 bp ATCCTAATTACAACTCCCACACTTTTCACTAAATTAAAAGAGACCAGTGTGTTGCTCTTGGCCCCAAAGTaGGGTTCATCCAAGCGCTCC +
Preference number: 4 (lower is better)
Translates to: ILITTPTLFTKLKETSVLLLAPK*GSSKRS
Trigger: GGAGCGCTTGGATGAACCTCACTTTGGGGCCAAGAG...CAACACACTGGTCTCTTTTAATTTAGTGAAAAGTGTGGGAGTTGTAATTAGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
CDS-3UTR TCA 90 bp AACCACAAATGCTCACAGGGAAAGAACAAAACCAGGTGGATACAGAGGGCTGGGTTCAGGGAGACTAAATaGCACATATGCTATTCACTT +
Preference number: 4 (lower is better)
Translates to: NHKCSQGKNKTRWIQRAGFRETK*HICYSL
Trigger: AAGTGAATAGCATATGTGTCATTTAGTCTCCCTGAA...CCCAGCCCTCTGTATCCACCTGGTTTTGTTCTTTCCCTGTGAGCATTTGTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR TCA 90 bp TCTGTTGGTGAATTTAACAGCTGCCTATTACATATGGTAAGGACTAAGCAAAAGAGAGGACACAACAGCTaGTGCCTGGAGGACCCTGAA +
Preference number: 4 (lower is better)
Translates to: SVGEFNSCLLHMVRTKQKRGHNS*CLEDPE
Trigger: TTCAGGGTCCTCCAGGCATCAGCTGTTGTGTCCTCT...CTTTTGCTTAGTCCTTACCATATGTAATAGGCAGCTGTTAAATTCACCAACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR TCA 90 bp GCAGAAAACATGGGCTCAGAAGGACAAAGCATTCTCAGGACAGCTCTGTCTCTTACTTCTTACATGTGTTaGAAAAGCAGGCATGTTCTG +
Preference number: 4 (lower is better)
Translates to: AENMGSEGQSILRTALSLTSYMC*KSRHVL
Trigger: CAGAACATGCCTGCTTTTTCAACACATGTAAGAAGT...AAGAGACAGAGCTGTCCTGAGAATGCTTTGTCCTTCTGAGCCCATGTTTTCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464260.5
CDS-3UTR TCA 90 bp ACTGAGCAGAAAACATGGGCTCAGAAGGACAAAGCATTCTCAGGACAGCTCTGTCTTGGTCACGTAAGATaGAAAATCAGGGTATCTGTT +
Preference number: 4 (lower is better)
Translates to: TEQKTWAQKDKAFSGQLCLGHVR*KIRVSV
Trigger: AACAGATACCCTGATTTTTCATCTTACGTGACCAAG...ACAGAGCTGTCCTGAGAATGCTTTGTCCTTCTGAGCCCATGTTTTCTGCTCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR TCA 90 bp AGTAAACCATTCCAAATCTGCTTCCAAGCTGCTACTGAGCAGAAAACATGGGCTTGCCAGGGAACACTGTaGCTCATTCAGTATCATTTC +
Preference number: 4 (lower is better)
Translates to: SKPFQICFQAATEQKTWACQGTL*LIQYHF
Trigger: GAAATGATACTGAATGAGTCACAGTGTTCCCTGGCA...AGCCCATGTTTTCTGCTCAGTAGCAGCTTGGAAGCAGATTTGGAATGGTTTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR TCA 90 bp GGGATTCCATGTCTGGGGTGGATGATCCTAATTACAACTCCCACACTTTTCACTTTTGCAACCAAATGTTaGAGACTGCTGCCTTTCCAT +
Preference number: 4 (lower is better)
Translates to: GIPCLGWMILITTPTLFTFATKC*RLLPFH
Trigger: ATGGAAAGGCAGCAGTCTTCAACATTTGGTTGCAAA...AGTGAAAAGTGTGGGAGTTGTAATTAGGATCATCCACCCCAGACATGGAATCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR TCA 90 bp AGTAAACCATTCCAAATCTGCTTCCAAGCTGCTACTGAGCAGAAAACATGGGCTTCACGCTTGAATTCCTaGCTTACTGTGTTGCAACTG +
Preference number: 4 (lower is better)
Translates to: SKPFQICFQAATEQKTWASRLNS*LTVLQL
Trigger: CAGTTGCAACACAGTAAGTCAGGAATTCAAGCGTGA...AGCCCATGTTTTCTGCTCAGTAGCAGCTTGGAAGCAGATTTGGAATGGTTTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR TCA 90 bp AGTAAACCATTCCAAATCTGCTTCCAAGCTGCTACTGAGCAGAAAACATGGGCTTTTCGTTTGGCTGTTTaGGTCACCTTAGGCAAAGAG +
Preference number: 4 (lower is better)
Translates to: SKPFQICFQAATEQKTWAFRLAV*VTLGKE
Trigger: CTCTTTGCCTAAGGTGACTCAAACAGCCAAACGAAA...AGCCCATGTTTTCTGCTCAGTAGCAGCTTGGAAGCAGATTTGGAATGGTTTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR TCA 90 bp GCACCTGGCTTCAAGGAACACACATACAGTTATAGGCTGCTGCTTCTCAGAACATTTTTCCCTGATACTTaGCTATTACATCCGCCTTTG +
Preference number: 4 (lower is better)
Translates to: APGFKEHTYSYRLLLLRTFFPDT*LLHPPL
Trigger: CAAAGGCGGATGTAATAGTCAAGTATCAGGGAAAAA...TGTTCTGAGAAGCAGCAGCCTATAACTGTATGTGTGTTCCTTGAAGCCAGGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR TCA 90 bp AGTAAACCATTCCAAATCTGCTTCCAAGCTGCTACTGAGCAGAAAACATGGGCTTCCCAGTTGTACCTGTaGCTGTGTTTATCTGACTTC +
Preference number: 4 (lower is better)
Translates to: SKPFQICFQAATEQKTWASQLYL*LCLSDF
Trigger: GAAGTCAGATAAACACAGTCACAGGTACAACTGGGA...AGCCCATGTTTTCTGCTCAGTAGCAGCTTGGAAGCAGATTTGGAATGGTTTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR GCA 90 bp AACCACAAATGCTCACAGGGAAAGAACAAAACCAGGTGGATACAGAGGGCTGGGGGTGAATTTAACAGCTaGCTATTACATATGGTAAGG +
Preference number: 4 (lower is better)
Translates to: NHKCSQGKNKTRWIQRAGGEFNS*LLHMVR
Trigger: CCTTACCATATGTAATAGGCAGCTGTTAAATTCACC...CCCAGCCCTCTGTATCCACCTGGTTTTGTTCTTTCCCTGTGAGCATTTGTGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR GCA 90 bp GGGATTCCATGTCTGGGGTGGATGATCCTAATTACAACTCCCACACTTTTCACTAATGTTGAAGACTGCTaGCTTTCCATTGTCAAGGAG +
Preference number: 4 (lower is better)
Translates to: GIPCLGWMILITTPTLFTNVEDC*LSIVKE
Trigger: CTCCTTGACAATGGAAAGGCAGCAGTCTTCAACATT...AGTGAAAAGTGTGGGAGTTGTAATTAGGATCATCCACCCCAGACATGGAATCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR GCA 90 bp CACTCCTTTCTCAATGCAAACAGCTTACTTGCCAGGGAACACTGTGACTCATTCCCAAATGTTGAAGACTaGTGCCTTTCCATTGTCAAG +
Preference number: 4 (lower is better)
Translates to: HSFLNANSLLAREHCDSFPNVED*CLSIVK
Trigger: CTTGACAATGGAAAGGCAGCAGTCTTCAACATTTGG...GAATGAGTCACAGTGTTCCCTGGCAAGTAAGCTGTTTGCATTGAGAAAGGAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR GCA 90 bp AACCACAAATGCTCACAGGGAAAGAACAAAACCAGGTGGATACAGAGGGCTGGGAGCTATAACCACAAATaGTCACAGGGAAAGAACAAA +
Preference number: 4 (lower is better)
Translates to: NHKCSQGKNKTRWIQRAGSYNHK*SQGKNK
Trigger: TTTGTTCTTTCCCTGTGAGCATTTGTGGTTATAGCT...CCCAGCCCTCTGTATCCACCTGGTTTTGTTCTTTCCCTGTGAGCATTTGTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR GCA 90 bp GACACAACAGCTGATGCCTGGAGGACCCTGAACAGGATCTTGAAAAGAATCTTCTCTAAATACAGTCTATaGCTTTGCTGCATGCTTGCT +
Preference number: 4 (lower is better)
Translates to: DTTADAWRTLNRILKRIFSKYSL*LCCMLA
Trigger: AGCAAGCATGCAGCAAAGGCATAGACTGTATTTAGA...GAAGATTCTTTTCAAGATCCTGTTCAGGGTCCTCCAGGCATCAGCTGTTGTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR GCA 90 bp GCAGAAAACATGGGCTCAGAAGGACAAAGCATTCTCAGGACAGCTCTGTCTCTTTTCTGTGACCTGAACTaGAGTTGTGTAAGTGCTATA +
Preference number: 4 (lower is better)
Translates to: AENMGSEGQSILRTALSLFCDLN*SCVSAI
Trigger: TATAGCACTTACACAACTGCAGTTCAGGTCACAGAA...AAGAGACAGAGCTGTCCTGAGAATGCTTTGTCCTTCTGAGCCCATGTTTTCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR CCA 90 bp CACTCCTTTCTCAATGCAAACAGCTTACTTGCCAGGGAACACTGTGACTCATTCCTGTTTAAGGGCCTCTaGGAGTCGAGATTTTACATA +
Preference number: 4 (lower is better)
Translates to: HSFLNANSLLAREHCDSFLFKGL*ESRFYI
Trigger: TATGTAAAATCTCGACTCCCAGAGGCCCTTAAACAG...GAATGAGTCACAGTGTTCCCTGGCAAGTAAGCTGTTTGCATTGAGAAAGGAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR CCA 90 bp CCATGTCTGGGGTGGATGATCCTAATTACAACTCCCACACTTTTCACTAAATTACAGGATGTCTGGGTCTaGGATGACCACGTTGAGATT +
Preference number: 4 (lower is better)
Translates to: PCLGWMILITTPTLFTKLQDVWV*DDHVEI
Trigger: AATCTCAACGTGGTCATCCCAGACCCAGACATCCTG...TAATTTAGTGAAAAGTGTGGGAGTTGTAATTAGGATCATCCACCCCAGACATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
CDS-3UTR CCA 90 bp TCCACAGAGCAGGATTTAGACGTTTTCATTACTACACGAAGAAGTCATCATTTGGCAGGCAGTTGCCACTaGTCTCTCATTCTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: STEQDLDVFITTRRSHHLAGSCH*SLILSA
Trigger: AGCAGAGAGAATGAGAGACCAGTGGCAACTGCCTGC...CAAATGATGACTTCTTCGTGTAGTAATGAAAACGTCTAAATCCTGCTCTGTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR CCA 90 bp TCCCCTAACGTGGTTTCTTGGTCACGTAAGATGAAAAATCAGGGTATCTGTTGGGAAAGCTCCCTGATGTaGATGGAGATTTGCAACCAA +
Preference number: 4 (lower is better)
Translates to: SPNVVSWSRKMKNQGICWESSLM*MEICNQ
Trigger: TTGGTTGCAAATCTCCATCCACATCAGGGAGCTTTC...CCAACAGATACCCTGATTTTTCATCTTACGTGACCAAGAAACCACGTTAGGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR CCA 90 bp GGGATTCCATGTCTGGGGTGGATGATCCTAATTACAACTCCCACACTTTTCACTTCTCAAATTCTCTCCTaGACACTGCTTTGGGAAAAC +
Preference number: 4 (lower is better)
Translates to: GIPCLGWMILITTPTLFTSQILS*TLLWEN
Trigger: GTTTTCCCAAAGCAGTGTCCAGGAGAGAATTTGAGA...AGTGAAAAGTGTGGGAGTTGTAATTAGGATCATCCACCCCAGACATGGAATCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR CCA 90 bp CAGTTTCTTAACTACATTGGCCAAGGGCACCCTCTGTTCGTCACTGATTATAGAAACCATCCCAAAATTTaGCACCATGGGGACTATTGG +
Preference number: 4 (lower is better)
Translates to: QFLNYIGQGHPLFVTDYRNHPKI*HHGDYW
Trigger: CCAATAGTCCCCATGGTGCCAAATTTTGGGATGGTT...TCTATAATCAGTGACGAACAGAGGGTGCCCTTGGCCAATGTAGTTAAGAAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR CCA 90 bp CACTCCTTTCTCAATGCAAACAGCTTACTTGCCAGGGAACACTGTGACTCATTCAAAGGTGGGATGATATaGGACAGGAGTTTTAGAAGG +
Preference number: 4 (lower is better)
Translates to: HSFLNANSLLAREHCDSFKGGMI*DRSFRR
Trigger: CCTTCTAAAACTCCTGTCCCATATCATCCCACCTTT...GAATGAGTCACAGTGTTCCCTGGCAAGTAAGCTGTTTGCATTGAGAAAGGAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR CCA 90 bp GGGATTCCATGTCTGGGGTGGATGATCCTAATTACAACTCCCACACTTTTCACTATGCTTGCTTTTTGGTaGAGCTTTGAACAGGGAAAC +
Preference number: 4 (lower is better)
Translates to: GIPCLGWMILITTPTLFTMLAFW*SFEQGN
Trigger: GTTTCCCTGTTCAAAGCTCCACCAAAAAGCAAGCAT...AGTGAAAAGTGTGGGAGTTGTAATTAGGATCATCCACCCCAGACATGGAATCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000498165.6
3UTR CAA 72 bp CACCAGCTCACTCCTTTCTCAATGCAAACAGCTTACTaGCCAGGGAACACTGTGACTCATTCAGTATCATTT +
Preference number: 4 (lower is better)
Translates to: HQLTPFSMQTAY*PGNTVTHSVSF
Trigger: AAATGATACTGAATGAGTCACAGTGTTCCCTGGCAAGTAAGCTGTTTGCATTGAGAAAGGAGTGAGCTGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR TCA 90 bp CAAAATAGTAAACCATTCCAAATCTGCTTCCAAGCTGCTACTGAGCAGAAAACACCACGTTGGCCACAGTaGGGTCTTTATCTGATAGCA +
Preference number: 4 (lower is better)
Translates to: QNSKPFQICFQAATEQKTPRWPQ*GLYLIA
Trigger: TGCTATCAGATAAAGACCTCACTGTGGCCAACGTGG...TGTTTTCTGCTCAGTAGCAGCTTGGAAGCAGATTTGGAATGGTTTACTATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
CDS-3UTR TCA 90 bp CCATGTCTGGGGTGGATGATCCTAATTACAACTCCCACACTTTTCACTAAATTAATCCCAGAGACCATCTaGTGCCAAGATCATGAACTC +
Preference number: 4 (lower is better)
Translates to: PCLGWMILITTPTLFTKLIPETI*CQDHEL
Trigger: GAGTTCATGATCTTGGCATCAGATGGTCTCTGGGAT...TAATTTAGTGAAAAGTGTGGGAGTTGTAATTAGGATCATCCACCCCAGACATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
CDS-3UTR GCA 90 bp GGGATTCCATGTCTGGGGTGGATGATCCTAATTACAACTCCCACACTTTTCACTCAATCAAACACGTTGTaGCTGCTTCATCATAGGATA +
Preference number: 4 (lower is better)
Translates to: GIPCLGWMILITTPTLFTQSNTL*LLHHRI
Trigger: TATCCTATGATGAAGCAGGCACAACGTGTTTGATTG...AGTGAAAAGTGTGGGAGTTGTAATTAGGATCATCCACCCCAGACATGGAATCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
CDS-3UTR GCA 90 bp GGGATTCCATGTCTGGGGTGGATGATCCTAATTACAACTCCCACACTTTTCACTTTTTACATATTCAGCTaGAGTCTGAGACTGGGAAGA +
Preference number: 4 (lower is better)
Translates to: GIPCLGWMILITTPTLFTFYIFS*SLRLGR
Trigger: TCTTCCCAGTCTCAGACTGCAGCTGAATATGTAAAA...AGTGAAAAGTGTGGGAGTTGTAATTAGGATCATCCACCCCAGACATGGAATCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000464260.5
CDS-3UTR GCA 90 bp GCAGAAAACATGGGCTCAGAAGGACAAAGCATTCTCAGGACAGCTCTGTCTCTTATGTGGATGGAGATTTaGAACCAAATGTTGAAGACT +
Preference number: 4 (lower is better)
Translates to: AENMGSEGQSILRTALSLMWMEI*NQMLKT
Trigger: AGTCTTCAACATTTGGTTGCAAATCTCCATCCACAT...AAGAGACAGAGCTGTCCTGAGAATGCTTTGTCCTTCTGAGCCCATGTTTTCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR GCA 90 bp GCAGAAAACATGGGCTCAGAAGGACAAAGCATTCTCAGGACAGCTCTGTCTCTTAGCTATAACCACAAATaGTCACAGGGAAAGAACAAA +
Preference number: 4 (lower is better)
Translates to: AENMGSEGQSILRTALSLSYNHK*SQGKNK
Trigger: TTTGTTCTTTCCCTGTGAGCATTTGTGGTTATAGCT...AAGAGACAGAGCTGTCCTGAGAATGCTTTGTCCTTCTGAGCCCATGTTTTCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR GCA 90 bp CAGTTTCTTAACTACATTGGCCAAGGGCACCCTCTGTTCGTCACTGATTATAGAATCCGCCTTTGCTTCTaGATGAACACGTTTTACATC +
Preference number: 4 (lower is better)
Translates to: QFLNYIGQGHPLFVTDYRIRLCF*MNTFYI
Trigger: GATGTAAAACGTGTTCATGCAGAAGCAAAGGCGGAT...TCTATAATCAGTGACGAACAGAGGGTGCCCTTGGCCAATGTAGTTAAGAAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR GCA 90 bp ACCACAAATGCTCACAGGGAAAGAACAAAACCAGGTGGATACAGAGGGCTGGGAAAAAGTGGTAACAACTaGCTTTTCTTCATCTATGTG +
Preference number: 4 (lower is better)
Translates to: TTNAHRERTKPGGYRGLGKSGNN*LFFIYV
Trigger: CACATAGATGAAGAAAAGGCAGTTGTTACCACTTTT...TCCCAGCCCTCTGTATCCACCTGGTTTTGTTCTTTCCCTGTGAGCATTTGTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR GCA 90 bp CAAAATAGTAAACCATTCCAAATCTGCTTCCAAGCTGCTACTGAGCAGAAAACACCAAATGACACGCCATaGATCTTGAGTGACCGTGCA +
Preference number: 4 (lower is better)
Translates to: QNSKPFQICFQAATEQKTPNDTP*ILSDRA
Trigger: TGCACGGTCACTCAAGATGCATGGCGTGTCATTTGG...TGTTTTCTGCTCAGTAGCAGCTTGGAAGCAGATTTGGAATGGTTTACTATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR CCA 90 bp CAAAATAGTAAACCATTCCAAATCTGCTTCCAAGCTGCTACTGAGCAGAAAACAAAAGGTCAGGATGTCTaGGTCTGGGATGACCACGTT +
Preference number: 4 (lower is better)
Translates to: QNSKPFQICFQAATEQKTKGQDV*VWDDHV
Trigger: AACGTGGTCATCCCAGACCCAGACATCCTGACCTTT...TGTTTTCTGCTCAGTAGCAGCTTGGAAGCAGATTTGGAATGGTTTACTATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
CDS-3UTR CCA 90 bp ACTGAGCAGAAAACATGGGCTCAGAAGGACAAAGCATTCTCAGGACAGCTCTGTCCTAACGTGGTTTCTTaGTCACGTAAGATGAAAAAT +
Preference number: 4 (lower is better)
Translates to: TEQKTWAQKDKAFSGQLCPNVVS*SRKMKN
Trigger: ATTTTTCATCTTACGTGACCAAGAAACCACGTTAGG...ACAGAGCTGTCCTGAGAATGCTTTGTCCTTCTGAGCCCATGTTTTCTGCTCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR CCA 90 bp AGTAAACCATTCCAAATCTGCTTCCAAGCTGCTACTGAGCAGAAAACATGGGCTTCATTTCCCCTAACGTaGTTTCTTGGTCACGTAAGA +
Preference number: 4 (lower is better)
Translates to: SKPFQICFQAATEQKTWASFPLT*FLGHVR
Trigger: TCTTACGTGACCAAGAAACCACGTTAGGGGAAATGA...AGCCCATGTTTTCTGCTCAGTAGCAGCTTGGAAGCAGATTTGGAATGGTTTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR CCA 90 bp CAAAATAGTAAACCATTCCAAATCTGCTTCCAAGCTGCTACTGAGCAGAAAACACGGTTTGTATTTGCCTaGGGAAAGCTCCCTGATGTG +
Preference number: 4 (lower is better)
Translates to: QNSKPFQICFQAATEQKTRFVFA*GKLPDV
Trigger: CACATCAGGGAGCTTTCCCCAGGCAAATACAAACCG...TGTTTTCTGCTCAGTAGCAGCTTGGAAGCAGATTTGGAATGGTTTACTATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR CCA 90 bp ACCACAAATGCTCACAGGGAAAGAACAAAACCAGGTGGATACAGAGGGCTGGGAAGATTAACTTGGATTTaGCAAATGTTAGGTGGGATT +
Preference number: 4 (lower is better)
Translates to: TTNAHRERTKPGGYRGLGRLTWI*QMLGGI
Trigger: AATCCCACCTAACATTTGCCAAATCCAAGTTAATCT...TCCCAGCCCTCTGTATCCACCTGGTTTTGTTCTTTCCCTGTGAGCATTTGTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR CCA 90 bp TCCCCTAACGTGGTTTCTTGGTCACGTAAGATGAAAAATCAGGGTATCTGTTGGAACGTGAATGGAATCTaGGACAGTAAAGGTGTTGAG +
Preference number: 4 (lower is better)
Translates to: SPNVVSWSRKMKNQGICWNVNGI*DSKGVE
Trigger: CTCAACACCTTTACTGTCCCAGATTCCATTCACGTT...CCAACAGATACCCTGATTTTTCATCTTACGTGACCAAGAAACCACGTTAGGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR CCA 90 bp AGTAAACCATTCCAAATCTGCTTCCAAGCTGCTACTGAGCAGAAAACATGGGCTTTACTGTCCACGATTTaGAACGTGAATGGAATCTGG +
Preference number: 4 (lower is better)
Translates to: SKPFQICFQAATEQKTWALLSTI*NVNGIW
Trigger: CCAGATTCCATTCACGTTCCAAATCGTGGACAGTAA...AGCCCATGTTTTCTGCTCAGTAGCAGCTTGGAAGCAGATTTGGAATGGTTTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR TCA 90 bp CAGTTTCTTAACTACATTGGCCAAGGGCACCCTCTGTTCGTCACTGATTATAGACATTTCTCGGTCAATTaGCAAAATCTGCTGTTCAAG +
Preference number: 4 (lower is better)
Translates to: QFLNYIGQGHPLFVTDYRHFSVN*QNLLFK
Trigger: CTTGAACAGCAGATTTTGTCAATTGACCGAGAAATG...TCTATAATCAGTGACGAACAGAGGGTGCCCTTGGCCAATGTAGTTAAGAAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
CDS-3UTR TCA 90 bp AGTAAACCATTCCAAATCTGCTTCCAAGCTGCTACTGAGCAGAAAACATGGGCTATTTTGGACACTGGATaGAAGAGTTGGGAAAACATG +
Preference number: 4 (lower is better)
Translates to: SKPFQICFQAATEQKTWAILDTG*KSWENM
Trigger: CATGTTTTCCCAACTCTTTCATCCAGTGTCCAAAAT...AGCCCATGTTTTCTGCTCAGTAGCAGCTTGGAAGCAGATTTGGAATGGTTTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
CDS-3UTR TCA 90 bp CTCAGTCCACAGCAAGGAATAAAATGCAGCCACTGGTTACCAGTACTATGTACAGATTTGTTTCATCCATaGCTTTGGGGTAATCTCTCA +
Preference number: 4 (lower is better)
Translates to: LSPQQGIKCSHWLPVLCTDLFHP*LWGNLS
Trigger: TGAGAGATTACCCCAAAGTCATGGATGAAACAAATC...TGTACATAGTACTGGTAACCAGTGGCTGCATTTTATTCCTTGCTGTGGACTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR TCA 90 bp CACTCCTTTCTCAATGCAAACAGCTTACTTGCCAGGGAACACTGTGACTCATTCTACAAATTATGTATGTaGGCAGAGTTTACATTGGGG +
Preference number: 4 (lower is better)
Translates to: HSFLNANSLLAREHCDSFYKLCM*AEFTLG
Trigger: CCCCAATGTAAACTCTGCTCACATACATAATTTGTA...GAATGAGTCACAGTGTTCCCTGGCAAGTAAGCTGTTTGCATTGAGAAAGGAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR GCA 90 bp CAGTTTCTTAACTACATTGGCCAAGGGCACCCTCTGTTCGTCACTGATTATAGACAATCAAACACGTTGTaGCTGCTTCATCATAGGATA +
Preference number: 4 (lower is better)
Translates to: QFLNYIGQGHPLFVTDYRQSNTL*LLHHRI
Trigger: TATCCTATGATGAAGCAGGCACAACGTGTTTGATTG...TCTATAATCAGTGACGAACAGAGGGTGCCCTTGGCCAATGTAGTTAAGAAACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
CDS-3UTR GCA 90 bp AGTAAACCATTCCAAATCTGCTTCCAAGCTGCTACTGAGCAGAAAACATGGGCTACTGATGAAACCACCTaGTCTCTTTATCCTCTTTCT +
Preference number: 4 (lower is better)
Translates to: SKPFQICFQAATEQKTWATDETT*SLYPLS
Trigger: AGAAAGAGGATAAAGAGAGCAGGTGGTTTCATCAGT...AGCCCATGTTTTCTGCTCAGTAGCAGCTTGGAAGCAGATTTGGAATGGTTTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
CDS-3UTR GCA 90 bp ATCCTAATTACAACTCCCACACTTTTCACTAAATTAAAAGAGACCAGTGTGTTGGAAGAGGGTTATCTCTaGTGTGCAGGCAGTTGCCAC +
Preference number: 4 (lower is better)
Translates to: ILITTPTLFTKLKETSVLEEGYL*CAGSCH
Trigger: GTGGCAACTGCCTGCACAGCAGAGATAACCCTCTTC...CAACACACTGGTCTCTTTTAATTTAGTGAAAAGTGTGGGAGTTGTAATTAGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
CDS-3UTR GCA 90 bp AAGAAAGTTAAGTGCTTGGAGAAATCAAGACAGATTGCAGCCCTCCACATCTACGAAATCAAGACAGATTaGAGCCCTCCACATCTACAA +
Preference number: 4 (lower is better)
Translates to: KKVKCLEKSRQIAALHIYEIKTD*SPPHLQ
Trigger: TTGTAGATGTGGAGGGCTGCAATCTGTCTTGATTTC...GTAGATGTGGAGGGCTGCAATCTGTCTTGATTTCTCCAAGCACTTAACTTTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR GCA 90 bp ATCCTAATTACAACTCCCACACTTTTCACTAAATTAAAAGAGACCAGTGTGTTGCCGAGTCGATCGTTCTaGATGATCTCGGCTACCTTG +
Preference number: 4 (lower is better)
Translates to: ILITTPTLFTKLKETSVLPSRSF*MISATL
Trigger: CAAGGTAGCCGAGATCATGCAGAACGATCGACTCGG...CAACACACTGGTCTCTTTTAATTTAGTGAAAAGTGTGGGAGTTGTAATTAGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR GCA 90 bp CAGTTTCTTAACTACATTGGCCAAGGGCACCCTCTGTTCGTCACTGATTATAGATATTACATCCGCCTTTaGTTCTGCATGAACACGTTT +
Preference number: 4 (lower is better)
Translates to: QFLNYIGQGHPLFVTDYRYYIRL*FCMNTF
Trigger: AAACGTGTTCATGCAGAAGCAAAGGCGGATGTAATA...TCTATAATCAGTGACGAACAGAGGGTGCCCTTGGCCAATGTAGTTAAGAAACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR GCA 90 bp GCACCTGGCTTCAAGGAACACACATACAGTTATAGGCTGCTGCTTCTCAGAACAAAATGGAATAGGGACTaGAATTTTACTAACTTCGCA +
Preference number: 4 (lower is better)
Translates to: APGFKEHTYSYRLLLLRTKWNRD*NFTNFA
Trigger: TGCGAAGTTAGTAAAATTGCAGTCCCTATTCCATTT...TGTTCTGAGAAGCAGCAGCCTATAACTGTATGTGTGTTCCTTGAAGCCAGGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR CCA 90 bp GCAGAAAACATGGGCTCAGAAGGACAAAGCATTCTCAGGACAGCTCTGTCTCTTAAAAAGAGGTTTAATTaGATTTCCAGTTCCACATGG +
Preference number: 4 (lower is better)
Translates to: AENMGSEGQSILRTALSLKKRFN*ISSSTW
Trigger: CCATGTGGAACTGGAAATCCAATTAAACCTCTTTTT...AAGAGACAGAGCTGTCCTGAGAATGCTTTGTCCTTCTGAGCCCATGTTTTCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464260.5
CDS-3UTR CCA 90 bp TCCACAGAGCAGGATTTAGACGTTTTCATTACTACACGAAGAAGTCATCATTTGTGGGAACTCTGCACCTaGCTTCAAGGAACACACATA +
Preference number: 4 (lower is better)
Translates to: STEQDLDVFITTRRSHHLWELCT*LQGTHI
Trigger: TATGTGTGTTCCTTGAAGCCAGGTGCAGAGTTCCCA...CAAATGATGACTTCTTCGTGTAGTAATGAAAACGTCTAAATCCTGCTCTGTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR CCA 90 bp GCAGAAAACATGGGCTCAGAAGGACAAAGCATTCTCAGGACAGCTCTGTCTCTTCACTTTGGGAAACACTaGATTCTATTATTTCTACAG +
Preference number: 4 (lower is better)
Translates to: AENMGSEGQSILRTALSLHFGKH*ILLFLQ
Trigger: CTGTAGAAATAATAGAATCCAGTGTTTCCCAAAGTG...AAGAGACAGAGCTGTCCTGAGAATGCTTTGTCCTTCTGAGCCCATGTTTTCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR CCA 90 bp TCCCCTAACGTGGTTTCTTGGTCACGTAAGATGAAAAATCAGGGTATCTGTTGGAGTTTGCTTGAGTGTTaGCAAGAAATTCCCAATCTC +
Preference number: 4 (lower is better)
Translates to: SPNVVSWSRKMKNQGICWSLLEC*QEIPNL
Trigger: GAGATTGGGAATTTCTTGCCAACACTCAAGCAAACT...CCAACAGATACCCTGATTTTTCATCTTACGTGACCAAGAAACCACGTTAGGGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR TCA 90 bp CCATGTCTGGGGTGGATGATCCTAATTACAACTCCCACACTTTTCACTAAATTAAAGAGACCAGTGTGTTaGAAGTCCTTTAGTCTAAGG +
Preference number: 4 (lower is better)
Translates to: PCLGWMILITTPTLFTKLKRPVC*KSFSLR
Trigger: CCTTAGACTAAAGGACTTTCAACACACTGGTCTCTT...TAATTTAGTGAAAAGTGTGGGAGTTGTAATTAGGATCATCCACCCCAGACATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
CDS-3UTR TCA 90 bp AGTAAACCATTCCAAATCTGCTTCCAAGCTGCTACTGAGCAGAAAACATGGGCTTTCAGGGAGACTAAATaGCACATATGCTATTCACTT +
Preference number: 4 (lower is better)
Translates to: SKPFQICFQAATEQKTWAFRETK*HICYSL
Trigger: AAGTGAATAGCATATGTGTCATTTAGTCTCCCTGAA...AGCCCATGTTTTCTGCTCAGTAGCAGCTTGGAAGCAGATTTGGAATGGTTTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
CDS-3UTR TCA 90 bp CTCAGTCCACAGCAAGGAATAAAATGCAGCCACTGGTTACCAGTACTATGTACATTCAGGGAGACTAAATaGCACATATGCTATTCACTT +
Preference number: 4 (lower is better)
Translates to: LSPQQGIKCSHWLPVLCTFRETK*HICYSL
Trigger: AAGTGAATAGCATATGTGTCATTTAGTCTCCCTGAA...TGTACATAGTACTGGTAACCAGTGGCTGCATTTTATTCCTTGCTGTGGACTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR TCA 90 bp CCATGTCTGGGGTGGATGATCCTAATTACAACTCCCACACTTTTCACTAAATTAAGAGAGAAGAACTTCTaGGACATTATACTGTTCCCC +
Preference number: 4 (lower is better)
Translates to: PCLGWMILITTPTLFTKLREKNF*DIILFP
Trigger: GGGGAACAGTATAATGTCTCAGAAGTTCTTCTCTCT...TAATTTAGTGAAAAGTGTGGGAGTTGTAATTAGGATCATCCACCCCAGACATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR TCA 90 bp AGTAAACCATTCCAAATCTGCTTCCAAGCTGCTACTGAGCAGAAAACATGGGCTACGAGAAAGCCTGATTaGTTTTACAGTCATTTTGAC +
Preference number: 4 (lower is better)
Translates to: SKPFQICFQAATEQKTWATRKPD*FYSHFD
Trigger: GTCAAAATGACTGTAAAATCAATCAGGCTTTCTCGT...AGCCCATGTTTTCTGCTCAGTAGCAGCTTGGAAGCAGATTTGGAATGGTTTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR TCA 90 bp CTCAGTCCACAGCAAGGAATAAAATGCAGCCACTGGTTACCAGTACTATGTACAAGGTATAATAACCTCTaGAGACTTCCAAGAGTAATG +
Preference number: 4 (lower is better)
Translates to: LSPQQGIKCSHWLPVLCTRYNNL*RLPRVM
Trigger: CATTACTCTTGGAAGTCTTCAGAGGTTATTATACCT...TGTACATAGTACTGGTAACCAGTGGCTGCATTTTATTCCTTGCTGTGGACTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR GCA 90 bp CAAAATAGTAAACCATTCCAAATCTGCTTCCAAGCTGCTACTGAGCAGAAAACATGCTTCTCAGAACACTaGCTGACACTTGAAAACCAC +
Preference number: 4 (lower is better)
Translates to: QNSKPFQICFQAATEQKTCFSEH*LTLENH
Trigger: GTGGTTTTCAAGTGTCAGGCAGTGTTCTGAGAAGCA...TGTTTTCTGCTCAGTAGCAGCTTGGAAGCAGATTTGGAATGGTTTACTATTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR GCA 90 bp TCTGTTGGTGAATTTAACAGCTGCCTATTACATATGGTAAGGACTAAGCAAAAGACAGTTATAGGCTGCTaGTTCTCAGAACACTGCCTG +
Preference number: 4 (lower is better)
Translates to: SVGEFNSCLLHMVRTKQKTVIGC*FSEHCL
Trigger: CAGGCAGTGTTCTGAGAAGCAGCAGCCTATAACTGT...CTTTTGCTTAGTCCTTACCATATGTAATAGGCAGCTGTTAAATTCACCAACAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR GCA 90 bp AGTAAACCATTCCAAATCTGCTTCCAAGCTGCTACTGAGCAGAAAACATGGGCTATGTGGATGGAGATTTaGAACCAAATGTTGAAGACT +
Preference number: 4 (lower is better)
Translates to: SKPFQICFQAATEQKTWAMWMEI*NQMLKT
Trigger: AGTCTTCAACATTTGGTTGCAAATCTCCATCCACAT...AGCCCATGTTTTCTGCTCAGTAGCAGCTTGGAAGCAGATTTGGAATGGTTTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR CCA 90 bp ATCCTAATTACAACTCCCACACTTTTCACTAAATTAAAAGAGACCAGTGTGTTGCAGGATGTCTGGGTCTaGGATGACCACGTTGAGATT +
Preference number: 4 (lower is better)
Translates to: ILITTPTLFTKLKETSVLQDVWV*DDHVEI
Trigger: AATCTCAACGTGGTCATCCCAGACCCAGACATCCTG...CAACACACTGGTCTCTTTTAATTTAGTGAAAAGTGTGGGAGTTGTAATTAGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
CDS-3UTR CCA 90 bp ATCCTAATTACAACTCCCACACTTTTCACTAAATTAAAAGAGACCAGTGTGTTGGGAGGCCAAGGCTGGTaGATTACAAGGTCAGGATAT +
Preference number: 4 (lower is better)
Translates to: ILITTPTLFTKLKETSVLGGQGW*ITRSGY
Trigger: ATATCCTGACCTTGTAATCCACCAGCCTTGGCCTCC...CAACACACTGGTCTCTTTTAATTTAGTGAAAAGTGTGGGAGTTGTAATTAGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR TCA 90 bp TCTGTTGGTGAATTTAACAGCTGCCTATTACATATGGTAAGGACTAAGCAAAAGCACTGCCATATACTCTaGGCTCTACTACAGGTAATG +
Preference number: 4 (lower is better)
Translates to: SVGEFNSCLLHMVRTKQKHCHIL*ALLQVM
Trigger: CATTACCTGTAGTAGAGCTCAGAGTATATGGCAGTG...CTTTTGCTTAGTCCTTACCATATGTAATAGGCAGCTGTTAAATTCACCAACAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR GCA 90 bp CCATGTCTGGGGTGGATGATCCTAATTACAACTCCCACACTTTTCACTAAATTACTTGATGAATCGAACTaGTTCTTCATTGCTGAAAGC +
Preference number: 4 (lower is better)
Translates to: PCLGWMILITTPTLFTKLLDESN*FFIAES
Trigger: GCTTTCAGCAATGAAGAAGCAGTTCGATTCATCAAG...TAATTTAGTGAAAAGTGTGGGAGTTGTAATTAGGATCATCCACCCCAGACATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
CDS-3UTR GCA 90 bp CAAAATAGTAAACCATTCCAAATCTGCTTCCAAGCTGCTACTGAGCAGAAAACATCACTCCTTTCTCAATaGAAACAGCTTACTTGCCAG +
Preference number: 4 (lower is better)
Translates to: QNSKPFQICFQAATEQKTSLLSQ*KQLTCQ
Trigger: CTGGCAAGTAAGCTGTTTGCATTGAGAAAGGAGTGA...TGTTTTCTGCTCAGTAGCAGCTTGGAAGCAGATTTGGAATGGTTTACTATTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR GCA 90 bp CAAAATAGTAAACCATTCCAAATCTGCTTCCAAGCTGCTACTGAGCAGAAAACACCAAATGTTGAAGACTaGTGCCTTTCCATTGTCAAG +
Preference number: 4 (lower is better)
Translates to: QNSKPFQICFQAATEQKTPNVED*CLSIVK
Trigger: CTTGACAATGGAAAGGCAGCAGTCTTCAACATTTGG...TGTTTTCTGCTCAGTAGCAGCTTGGAAGCAGATTTGGAATGGTTTACTATTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR GCA 90 bp AAGAAAGTTAAGTGCTTGGAGAAATCAAGACAGATTGCAGCCCTCCACATCTACTCATGCAATCCTGTTTaGCATTTACCCAAAATGATG +
Preference number: 4 (lower is better)
Translates to: KKVKCLEKSRQIAALHIYSCNPV*HLPKMM
Trigger: CATCATTTTGGGTAAATGGCAAACAGGATTGCATGA...GTAGATGTGGAGGGCTGCAATCTGTCTTGATTTCTCCAAGCACTTAACTTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR GCA 90 bp AGTAAACCATTCCAAATCTGCTTCCAAGCTGCTACTGAGCAGAAAACATGGGCTGTTAAAATGAATACTTaGTACATGCTCTCCTCAAAG +
Preference number: 4 (lower is better)
Translates to: SKPFQICFQAATEQKTWAVKMNT*YMLSSK
Trigger: CTTTGAGGAGAGCATGTAGCAAGTATTCATTTTAAC...AGCCCATGTTTTCTGCTCAGTAGCAGCTTGGAAGCAGATTTGGAATGGTTTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR CCA 90 bp CAGTTTCTTAACTACATTGGCCAAGGGCACCCTCTGTTCGTCACTGATTATAGAAAATGGAAGGAATCATaGTATTGTGGCTTGCTTTTT +
Preference number: 4 (lower is better)
Translates to: QFLNYIGQGHPLFVTDYRKWKES*YCGLLF
Trigger: AAAAAGCAAGCCACAATACCATGATTCCTTCCATTT...TCTATAATCAGTGACGAACAGAGGGTGCCCTTGGCCAATGTAGTTAAGAAACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR CCA 90 bp ATCCTAATTACAACTCCCACACTTTTCACTAAATTAAAAGAGACCAGTGTGTTGACAAAAACTGGCAGCTaGAGCTCAATTCAGGGTGGT +
Preference number: 4 (lower is better)
Translates to: ILITTPTLFTKLKETSVLTKTGS*SSIQGG
Trigger: ACCACCCTGAATTGAGCTCCAGCTGCCAGTTTTTGT...CAACACACTGGTCTCTTTTAATTTAGTGAAAAGTGTGGGAGTTGTAATTAGGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR CCA 90 bp CCATGTCTGGGGTGGATGATCCTAATTACAACTCCCACACTTTTCACTAAATTAGGTGAATGTGGCATATaGGAAGCTATAACCACAAAT +
Preference number: 4 (lower is better)
Translates to: PCLGWMILITTPTLFTKLGECGI*EAITTN
Trigger: ATTTGTGGTTATAGCTTCCCATATGCCACATTCACC...TAATTTAGTGAAAAGTGTGGGAGTTGTAATTAGGATCATCCACCCCAGACATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
3UTR CAA 72 bp CTGCCTTTTCTAAACACAGACCTTTCATTGACACAGTaGCAAGAGAGATCTGGCAACAACTTAGAGAACAAA +
Preference number: 4 (lower is better)
Translates to: LPFLNTDLSLTQ*QERSGNNLENK
Trigger: TTTGTTCTCTAAGTTGTTGCCAGATCTCTCTTGCAACTGTGTCAATGAAAGGTCTGTGTTTAGAAAAGGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498165.6
3UTR CAA 72 bp TATGCCTTTGCTGCATGCTTGCTTTTTGGTGGAGCTTaGAACAGGGAAACTGTCTGTGATGATTTGTTAAAA +
Preference number: 4 (lower is better)
Translates to: YAFAACLLFGGA*NRETVCDDLLK
Trigger: TTTTAACAAATCATCACAGACAGTTTCCCTGTTCAAAGCTCCACCAAAAAGCAAGCATGCAGCAAAGGCATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR TCA 90 bp CAAAATAGTAAACCATTCCAAATCTGCTTCCAAGCTGCTACTGAGCAGAAAACAATTTTGGACACTGGATaGAAGAGTTGGGAAAACATG +
Preference number: 4 (lower is better)
Translates to: QNSKPFQICFQAATEQKTILDTG*KSWENM
Trigger: CATGTTTTCCCAACTCTTTCATCCAGTGTCCAAAAT...TGTTTTCTGCTCAGTAGCAGCTTGGAAGCAGATTTGGAATGGTTTACTATTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
CDS-3UTR TCA 90 bp TCCACAGAGCAGGATTTAGACGTTTTCATTACTACACGAAGAAGTCATCATTTGTTAGAAGACGCCTTGTaGACCTCAATTAGAGAGAAA +
Preference number: 4 (lower is better)
Translates to: STEQDLDVFITTRRSHHLLEDAL*TSIREK
Trigger: TTTCTCTCTAATTGAGGTTCACAAGGCGTCTTCTAA...CAAATGATGACTTCTTCGTGTAGTAATGAAAACGTCTAAATCCTGCTCTGTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR TCA 90 bp CAAAATAGTAAACCATTCCAAATCTGCTTCCAAGCTGCTACTGAGCAGAAAACAAAAGGGGTTTTTCCCTaGTACTTGACTATTACATCC +
Preference number: 4 (lower is better)
Translates to: QNSKPFQICFQAATEQKTKGVFP*YLTITS
Trigger: GGATGTAATAGTCAAGTATCAGGGAAAAACCCCTTT...TGTTTTCTGCTCAGTAGCAGCTTGGAAGCAGATTTGGAATGGTTTACTATTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR GCA 90 bp CAAAATAGTAAACCATTCCAAATCTGCTTCCAAGCTGCTACTGAGCAGAAAACACAATCAAACACGTTGTaGCTGCTTCATCATAGGATA +
Preference number: 4 (lower is better)
Translates to: QNSKPFQICFQAATEQKTQSNTL*LLHHRI
Trigger: TATCCTATGATGAAGCAGGCACAACGTGTTTGATTG...TGTTTTCTGCTCAGTAGCAGCTTGGAAGCAGATTTGGAATGGTTTACTATTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
CDS-3UTR GCA 90 bp CCATGTCTGGGGTGGATGATCCTAATTACAACTCCCACACTTTTCACTAAATTAGGTGAATTTAACAGCTaGCTATTACATATGGTAAGG +
Preference number: 4 (lower is better)
Translates to: PCLGWMILITTPTLFTKLGEFNS*LLHMVR
Trigger: CCTTACCATATGTAATAGGCAGCTGTTAAATTCACC...TAATTTAGTGAAAAGTGTGGGAGTTGTAATTAGGATCATCCACCCCAGACATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR GCA 90 bp TCTGTTGGTGAATTTAACAGCTGCCTATTACATATGGTAAGGACTAAGCAAAAGCAGCAAGGAATAAAATaGAGCCACTGGTTACCAGTA +
Preference number: 4 (lower is better)
Translates to: SVGEFNSCLLHMVRTKQKQQGIK*SHWLPV
Trigger: TACTGGTAACCAGTGGCTGCATTTTATTCCTTGCTG...CTTTTGCTTAGTCCTTACCATATGTAATAGGCAGCTGTTAAATTCACCAACAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR CCA 90 bp TCTGTTGGTGAATTTAACAGCTGCCTATTACATATGGTAAGGACTAAGCAAAAGCTGTTTAAGGGCCTCTaGGAGTCGAGATTTTACATA +
Preference number: 4 (lower is better)
Translates to: SVGEFNSCLLHMVRTKQKLFKGL*ESRFYI
Trigger: TATGTAAAATCTCGACTCCCAGAGGCCCTTAAACAG...CTTTTGCTTAGTCCTTACCATATGTAATAGGCAGCTGTTAAATTCACCAACAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR CCA 90 bp CAAAATAGTAAACCATTCCAAATCTGCTTCCAAGCTGCTACTGAGCAGAAAACAATTCCATGTCTGGGGTaGATGATCCTAATTACAACT +
Preference number: 4 (lower is better)
Translates to: QNSKPFQICFQAATEQKTIPCLG*MILITT
Trigger: AGTTGTAATTAGGATCATCCACCCCAGACATGGAAT...TGTTTTCTGCTCAGTAGCAGCTTGGAAGCAGATTTGGAATGGTTTACTATTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
3UTR CAA 72 bp AATGAATTTGAGACATATTTAGCTATGGCAGGGCTCTaGCTCATTATTCATATAAAAGAAAGGGATGGCCGG +
Preference number: 4 (lower is better)
Translates to: NEFETYLAMAGL*LIIHIKERDGR
Trigger: CCGGCCATCCCTTTCTTTTATATGAATAATGAGCAAGAGCCCTGCCATAGCTAAATATGTCTCAAATTCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498165.6
3UTR CAA 72 bp TTGTGCTCAATGTCCTCGGAGGTTTTTGAGATTAACTaGGATTTGGCAAATGTTAGGTGGGATTTTGTGTTT +
Preference number: 4 (lower is better)
Translates to: LCSMSSEVFEIN*DLANVRWDFVF
Trigger: AAACACAAAATCCCACCTAACATTTGCCAAATCCAAGTTAATCTCAAAAACCTCCGAGGACATTGAGCACAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR TCA 90 bp TCTGTTGGTGAATTTAACAGCTGCCTATTACATATGGTAAGGACTAAGCAAAAGCATTTCTCGGTCAATTaGCAAAATCTGCTGTTCAAG +
Preference number: 4 (lower is better)
Translates to: SVGEFNSCLLHMVRTKQKHFSVN*QNLLFK
Trigger: CTTGAACAGCAGATTTTGTCAATTGACCGAGAAATG...CTTTTGCTTAGTCCTTACCATATGTAATAGGCAGCTGTTAAATTCACCAACAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR TCA 90 bp ATCCTAATTACAACTCCCACACTTTTCACTAAATTAAAAGAGACCAGTGTGTTGCTTAGGCAAAGAGAGTaGCCCAGCATTTTCTCTAAA +
Preference number: 4 (lower is better)
Translates to: ILITTPTLFTKLKETSVLLRQRE*PSIFSK
Trigger: TTTAGAGAAAATGCTGGGTCACTCTCTTTGCCTAAG...CAACACACTGGTCTCTTTTAATTTAGTGAAAAGTGTGGGAGTTGTAATTAGGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR GCA 90 bp ATCCTAATTACAACTCCCACACTTTTCACTAAATTAAAAGAGACCAGTGTGTTGGAAATCAAGACAGATTaGAGCCCTCCACATCTACAA +
Preference number: 4 (lower is better)
Translates to: ILITTPTLFTKLKETSVLEIKTD*SPPHLQ
Trigger: TTGTAGATGTGGAGGGCTGCAATCTGTCTTGATTTC...CAACACACTGGTCTCTTTTAATTTAGTGAAAAGTGTGGGAGTTGTAATTAGGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR GCA 90 bp CAAAATAGTAAACCATTCCAAATCTGCTTCCAAGCTGCTACTGAGCAGAAAACATTATCTTCTGCAGTTTaGTTGAGTGTTGGCAAGAAA +
Preference number: 4 (lower is better)
Translates to: QNSKPFQICFQAATEQKTLSSAV*LSVGKK
Trigger: TTTCTTGCCAACACTCAAGCAAACTGCAGAAGATAA...TGTTTTCTGCTCAGTAGCAGCTTGGAAGCAGATTTGGAATGGTTTACTATTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR CCA 90 bp ATCCTAATTACAACTCCCACACTTTTCACTAAATTAAAAGAGACCAGTGTGTTGCTGTTTAAGGGCCTCTaGGAGTCGAGATTTTACATA +
Preference number: 4 (lower is better)
Translates to: ILITTPTLFTKLKETSVLLFKGL*ESRFYI
Trigger: TATGTAAAATCTCGACTCCCAGAGGCCCTTAAACAG...CAACACACTGGTCTCTTTTAATTTAGTGAAAAGTGTGGGAGTTGTAATTAGGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
CDS-3UTR CCA 90 bp TCTGTTGGTGAATTTAACAGCTGCCTATTACATATGGTAAGGACTAAGCAAAAGATTCCATGTCTGGGGTaGATGATCCTAATTACAACT +
Preference number: 4 (lower is better)
Translates to: SVGEFNSCLLHMVRTKQKIPCLG*MILITT
Trigger: AGTTGTAATTAGGATCATCCACCCCAGACATGGAAT...CTTTTGCTTAGTCCTTACCATATGTAATAGGCAGCTGTTAAATTCACCAACAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR CCA 90 bp CAAAATAGTAAACCATTCCAAATCTGCTTCCAAGCTGCTACTGAGCAGAAAACACCTAACGTGGTTTCTTaGTCACGTAAGATGAAAAAT +
Preference number: 4 (lower is better)
Translates to: QNSKPFQICFQAATEQKTPNVVS*SRKMKN
Trigger: ATTTTTCATCTTACGTGACCAAGAAACCACGTTAGG...TGTTTTCTGCTCAGTAGCAGCTTGGAAGCAGATTTGGAATGGTTTACTATTTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR TCA 90 bp TCTGTTGGTGAATTTAACAGCTGCCTATTACATATGGTAAGGACTAAGCAAAAGAAGTCTAGCTATCAATaGCTTAATCCAGAGGCAATT +
Preference number: 4 (lower is better)
Translates to: SVGEFNSCLLHMVRTKQKKSSYQ*LNPEAI
Trigger: AATTGCCTCTGGATTAAGTCATTGATAGCTAGACTT...CTTTTGCTTAGTCCTTACCATATGTAATAGGCAGCTGTTAAATTCACCAACAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR GCA 90 bp ATCCTAATTACAACTCCCACACTTTTCACTAAATTAAAAGAGACCAGTGTGTTGCTTGATGAATCGAACTaGTTCTTCATTGCTGAAAGC +
Preference number: 4 (lower is better)
Translates to: ILITTPTLFTKLKETSVLLDESN*FFIAES
Trigger: GCTTTCAGCAATGAAGAAGCAGTTCGATTCATCAAG...CAACACACTGGTCTCTTTTAATTTAGTGAAAAGTGTGGGAGTTGTAATTAGGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
CDS-3UTR CCA 90 bp TCCACAGAGCAGGATTTAGACGTTTTCATTACTACACGAAGAAGTCATCATTTGTTAGAAGAGCATCTTTaGAACTTGTGTTCTTTGGAA +
Preference number: 4 (lower is better)
Translates to: STEQDLDVFITTRRSHHLLEEHL*NLCSLE
Trigger: TTCCAAAGAACACAAGTTCCAAAGATGCTCTTCTAA...CAAATGATGACTTCTTCGTGTAGTAATGAAAACGTCTAAATCCTGCTCTGTGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR TCA 90 bp ATCCTAATTACAACTCCCACACTTTTCACTAAATTAAAAGAGACCAGTGTGTTGCACTTCAGATTCAATTaGAATGATGATGCCATCACT +
Preference number: 4 (lower is better)
Translates to: ILITTPTLFTKLKETSVLHFRFN*NDDAIT
Trigger: AGTGATGGCATCATCATTTCAATTGAATCTGAAGTG...CAACACACTGGTCTCTTTTAATTTAGTGAAAAGTGTGGGAGTTGTAATTAGGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498165.6
3UTR CAA 72 bp AATCTGGAAAACACTGGGCTAACTGACAGTAGATATTaGTTGTGTTTTTCTCTCCTCACAGGACATTTAAAT +
Preference number: 4 (lower is better)
Translates to: NLENTGLTDSRY*LCFSLLTGHLN
Trigger: ATTTAAATGTCCTGTGAGGAGAGAAAAACACAACAAATATCTACTGTCAGTTAGCCCAGTGTTTTCCAGATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS TCA 90 bp GCAAGAAGAATCAAGTTAAAGTTGCGCTGGGCGGGTCTGCCGCGGTaGGCGGGAGAGTTCAGGGGCGCCGGCGCCCGCGCGGTCCCTCCG +
Preference number: 5 (lower is better)
Translates to: ARRIKLKLRWAGLPR*AGEFRGAGARAVPP
Trigger: CGGAGGGACCGCGCGGGCGCCGGCGCCCCTGAACTCTCCCGCTCACCGCGGCAGACCCGCCCAGCGCAACTTTAACTTGATTCTTCTTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497343.5
CDS GCA 90 bp GCAGTCTCTCCCCCGTGCCCGTCGAAGATCCCGAAGATGGACGGGTaGGTCTTGTTGGCCAGATCCGTGAGAACTTCGAAGCGGTCCTCC +
Preference number: 5 (lower is better)
Translates to: AVSPPCPSKIPKMDG*VLLARSVRTSKRSS
Trigger: GGAGGACCGCTTCGAAGTTCTCACGGATCTGGCCAACAAGACGCACCCGTCCATCTTCGGGATCTTCGACGGGCACGGGGGAGAGACTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497343.5
ENST00000498165.6
CDS-3UTR CAA 90 bp CTACTGCTGCACCCTTGCACAGCTGCTGGCCCACTTGGGTGGAGGCTTCCAGTGCGCGAGTCACCCACGTaGGCCACAGTGAGGTCTTTA +
Preference number: 5 (lower is better)
Translates to: LLLHPCTAAGPLGWRLPVRESPT*ATVRSL
Trigger: TAAAGACCTCACTGTGGCCAACGTGGGTGACTCGCG...CACTGGAAGCCTCCACCCAAGTGGGCCAGCAGCTGTGCAAGGGTGCAGCAGTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS TCA 90 bp GGTCTCTCCGGCCCTGGATGGAGTACACCGCCACGTTGTGGTTCTTaGACTCCCAGGTCTTGGAAAACTCGGCCTCGAGCACATCAAGCC +
Preference number: 5 (lower is better)
Translates to: GLSGPGWSTPPRCGS*TPRSWKTRPRAHQA
Trigger: GGCTTGATGTGCTCGAGGCCGAGTTTTCCAAGACCTGGGAGTTCAAGAACCACAACGTGGCGGTGTACTCCATCCAGGGCCGGAGAGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497343.5
ENST00000498165.6
CDS CCA 90 bp TCCGTGAGAACTTCGAAGCGGTCCTCCATGTGGTCTCTCCGGCCCTaGATGGAGTACACCGCCACGTTGTGGTTCTTGAACTCCCAGGTC +
Preference number: 5 (lower is better)
Translates to: SVRTSKRSSMWSLRP*MEYTATLWFLNSQV
Trigger: GACCTGGGAGTTCAAGAACCACAACGTGGCGGTGTACTCCATCCAGGGCCGGAGAGACCACATGGAGGACCGCTTCGAAGTTCTCACGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497343.5
ENST00000498165.6
CDS CCA 90 bp GTCTTGTTGGCCAGATCCGTGAGAACTTCGAAGCGGTCCTCCATGTaGTCTCTCCGGCCCTGGATGGAGTACACCGCCACGTTGTGGTTC +
Preference number: 5 (lower is better)
Translates to: VLLARSVRTSKRSSM*SLRPWMEYTATLWF
Trigger: GAACCACAACGTGGCGGTGTACTCCATCCAGGGCCGGAGAGACCACATGGAGGACCGCTTCGAAGTTCTCACGGATCTGGCCAACAAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497343.5
ENST00000498165.6
CDS CCA 90 bp TCCATGTGGTCTCTCCGGCCCTGGATGGAGTACACCGCCACGTTGTaGTTCTTGAACTCCCAGGTCTTGGAAAACTCGGCCTCGAGCACA +
Preference number: 5 (lower is better)
Translates to: SMWSLRPWMEYTATL*FLNSQVLENSASST
Trigger: TGTGCTCGAGGCCGAGTTTTCCAAGACCTGGGAGTTCAAGAACCACAACGTGGCGGTGTACTCCATCCAGGGCCGGAGAGACCACATGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497343.5
ENST00000498165.6
CDS CCA 90 bp CCTTGCCCTTCACCATCTTCACGGCGTCCCGGCTGGACTTCACGATaGTCTTCACCTCGTCGGTGTGGAAGAAGTAACTCCATAGAGCCA +
Preference number: 5 (lower is better)
Translates to: PCPSPSSRRPGWTSR*SSPRRCGRSNSIEP
Trigger: TGGCTCTATGGAGTTACTTCTTCCACACCGACGAGGTGAAGACCATCGTGAAGTCCAGCCGGGACGCCGTGAAGATGGTGAAGGGCAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497343.5
ENST00000498165.6
CDS-3UTR CAA 90 bp ACAGAGGGCTGGGAGGCAACGGAAGTTTCGTTTGGCTGTTTGAGTCACCTTAGGCGGGGCGGTTTGTATTaGCCTGGGGAAAGCTCCCTG +
Preference number: 5 (lower is better)
Translates to: TEGWEATEVSFGCLSHLRRGGLY*PGESSL
Trigger: CAGGGAGCTTTCCCCAGGCAAATACAAACCGCCCCG...CCTAAGGTGACTCAAACAGCCAAACGAAACTTCCGTTGCCTCCCAGCCCTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR CAA 90 bp CTACTGCTGCACCCTTGCACAGCTGCTGGCCCACTTGGGTGGAGGCTTCCAGTGAGAAATCAAGACAGATaGCAGCCCTCCACATCTACA +
Preference number: 5 (lower is better)
Translates to: LLLHPCTAAGPLGWRLPVRNQDR*QPSTST
Trigger: TGTAGATGTGGAGGGCTGCAATCTGTCTTGATTTCT...CACTGGAAGCCTCCACCCAAGTGGGCCAGCAGCTGTGCAAGGGTGCAGCAGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR CAA 90 bp GACACAACAGCTGATGCCTGGAGGACCCTGAACAGGATCTTGAAAAGAATCTTCCAGCTGCTGGCCCACTaGGGTGGAGGCTTCCAGTGG +
Preference number: 5 (lower is better)
Translates to: DTTADAWRTLNRILKRIFQLLAH*GGGFQW
Trigger: CCACTGGAAGCCTCCACCCAAGTGGGCCAGCAGCTG...GAAGATTCTTTTCAAGATCCTGTTCAGGGTCCTCCAGGCATCAGCTGTTGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS TCA 90 bp CTTTGTCACACAGGACCCCGCGCGAGTCACCCACGTTGGCCACAGTaGGGTCTTTATCTGATAGCAGAGCAATCAAACACGTTGTGCCTG +
Preference number: 5 (lower is better)
Translates to: LCHTGPRASHPRWPQ*GLYLIAEQSNTLCL
Trigger: CAGGCACAACGTGTTTGATTGCTCTGCTATCAGATAAAGACCTCACTGTGGCCAACGTGGGTGACTCGCGCGGGGTCCTGTGTGACAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000480117.1
ENST00000498165.6
CDS-3UTR CAA 90 bp TGGGTGGTCTGTCCTGTCCACTGTTACAAAGAGAGGACACAACAGCTGATGCCTCGCGAGTCACCCACGTaGGCCACAGTGAGGTCTTTA +
Preference number: 5 (lower is better)
Translates to: WVVCPVHCYKERTQQLMPRESPT*ATVRSL
Trigger: TAAAGACCTCACTGTGGCCAACGTGGGTGACTCGCG...AGGCATCAGCTGTTGTGTCCTCTCTTTGTAACAGTGGACAGGACAGACCACCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
CDS-3UTR CAA 90 bp GTCTGTCCTGTCCACTGTTACAAAGAGAGGACACAACAGCTGATGCCTGGAGGAGGACAGCTCTGTCTCTaGGCAGAGGGTGTTGCCACA +
Preference number: 5 (lower is better)
Translates to: VCPVHCYKERTQQLMPGGGQLCL*AEGVAT
Trigger: TGTGGCAACACCCTCTGCCAAGAGACAGAGCTGTCC...TCCTCCAGGCATCAGCTGTTGTGTCCTCTCTTTGTAACAGTGGACAGGACAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
CDS-3UTR CAA 90 bp GCAGAAAACATGGGCTCAGAAGGACAAAGCATTCTCAGGACAGCTCTGTCTCTTCCTACTGCTGCACCCTaGCACAGCTGCTGGCCCACT +
Preference number: 5 (lower is better)
Translates to: AENMGSEGQSILRTALSLPTAAP*HSCWPT
Trigger: AGTGGGCCAGCAGCTGTGCAAGGGTGCAGCAGTAGG...AAGAGACAGAGCTGTCCTGAGAATGCTTTGTCCTTCTGAGCCCATGTTTTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR CAA 90 bp CTACTGCTGCACCCTTGCACAGCTGCTGGCCCACTTGGGTGGAGGCTTCCAGTGAGGTTTCGCCAAGCCTaGTTGTATTTATCATGGATG +
Preference number: 5 (lower is better)
Translates to: LLLHPCTAAGPLGWRLPVRFRQA*LYLSWM
Trigger: CATCCATGATAAATACAACAAGGCTTGGCGAAACCT...CACTGGAAGCCTCCACCCAAGTGGGCCAGCAGCTGTGCAAGGGTGCAGCAGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS CCA 90 bp CTCAGGCTGAAGCTTGTCCAGGTCAAAGGTCAGGATGTCTGGGTCTaGGATGACCACGTTGAGATTTTTCAGCGGATAATCCCCCAGGGA +
Preference number: 5 (lower is better)
Translates to: LRLKLVQVKGQDVWV*DDHVEIFQRIIPQG
Trigger: TCCCTGGGGGATTATCCGCTGAAAAATCTCAACGTGGTCATCCCAGACCCAGACATCCTGACCTTTGACCTGGACAAGCTTCAGCCTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000480117.1
ENST00000498165.6
CDS-3UTR CAA 90 bp AACCACAAATGCTCACAGGGAAAGAACAAAACCAGGTGGATACAGAGGGCTGGGATAGCGTTCCCATCTTaGTCACACAGGACCCCGCGC +
Preference number: 5 (lower is better)
Translates to: NHKCSQGKNKTRWIQRAGIAFPS*SHRTPR
Trigger: GCGCGGGGTCCTGTGTGACAAAGATGGGAACGCTAT...CCCAGCCCTCTGTATCCACCTGGTTTTGTTCTTTCCCTGTGAGCATTTGTGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR CAA 90 bp GACACAACAGCTGATGCCTGGAGGACCCTGAACAGGATCTTGAAAAGAATCTTCTCTTGGCAGAGGGTGTaGCCACATCAGCCCCTGACC +
Preference number: 5 (lower is better)
Translates to: DTTADAWRTLNRILKRIFSWQRV*PHQPLT
Trigger: GGTCAGGGGCTGATGTGGCAACACCCTCTGCCAAGA...GAAGATTCTTTTCAAGATCCTGTTCAGGGTCCTCCAGGCATCAGCTGTTGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
CDS-3UTR CAA 90 bp GTCTGTCCTGTCCACTGTTACAAAGAGAGGACACAACAGCTGATGCCTGGAGGACTGCTGTGCAGGCAGTaGCCACTGGTCTCTCATTCT +
Preference number: 5 (lower is better)
Translates to: VCPVHCYKERTQQLMPGGLLCRQ*PLVSHS
Trigger: AGAATGAGAGACCAGTGGCAACTGCCTGCACAGCAG...TCCTCCAGGCATCAGCTGTTGTGTCCTCTCTTTGTAACAGTGGACAGGACAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
CDS-3UTR CAA 90 bp GACACAACAGCTGATGCCTGGAGGACCCTGAACAGGATCTTGAAAAGAATCTTCCGGGGCGGTTTGTATTaGCCTGGGGAAAGCTCCCTG +
Preference number: 5 (lower is better)
Translates to: DTTADAWRTLNRILKRIFRGGLY*PGESSL
Trigger: CAGGGAGCTTTCCCCAGGCAAATACAAACCGCCCCG...GAAGATTCTTTTCAAGATCCTGTTCAGGGTCCTCCAGGCATCAGCTGTTGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR CAA 90 bp GACACAACAGCTGATGCCTGGAGGACCCTGAACAGGATCTTGAAAAGAATCTTCAGGCCACGGGGCGGTTaGTATTTGCCTGGGGAAAGC +
Preference number: 5 (lower is better)
Translates to: DTTADAWRTLNRILKRIFRPRGG*YLPGES
Trigger: GCTTTCCCCAGGCAAATACAAACCGCCCCGTGGCCT...GAAGATTCTTTTCAAGATCCTGTTCAGGGTCCTCCAGGCATCAGCTGTTGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR CAA 90 bp GACTATTGGCAATTCGAACTCGAGCTAGCTAGGGAGTCTAGGAAGCCTTGGGTGGAGTACACCGCCACGTaGTGGTTCTTGAACTCCCAG +
Preference number: 5 (lower is better)
Translates to: DYWQFELELARESRKPWVEYTAT*WFLNSQ
Trigger: CTGGGAGTTCAAGAACCACAACGTGGCGGTGTACTC...CACCCAAGGCTTCCTAGACTCCCTAGCTAGCTCGAGTTCGAATTGCCAATAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR CAA 90 bp TGGGTGGTCTGTCCTGTCCACTGTTACAAAGAGAGGACACAACAGCTGATGCCTGGTGCTGATTTCAGTTaGATGGTGGGTGGGGGCAAC +
Preference number: 5 (lower is better)
Translates to: WVVCPVHCYKERTQQLMPGADFS*MVGGGN
Trigger: GTTGCCCCCACCCACCATCAAACTGAAATCAGCACC...AGGCATCAGCTGTTGTGTCCTCTCTTTGTAACAGTGGACAGGACAGACCACCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS TCA 90 bp TCTTCACCTCGTCGGTGTGGAAGAAGTAACTCCATAGAGCCAAGCTaGTGCACAGCAGGAAAAGCGTCTCGGGTCTCAGCAAGAAGTAGC +
Preference number: 5 (lower is better)
Translates to: SSPRRCGRSNSIEPS*CTAGKASRVSARSS
Trigger: GCTACTTCTTGCTGAGACCCGAGACGCTTTTCCTGCTGTGCATCAGCTTGGCTCTATGGAGTTACTTCTTCCACACCGACGAGGTGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497343.5
ENST00000498165.6
CDS-3UTR CAA 90 bp GACACAACAGCTGATGCCTGGAGGACCCTGAACAGGATCTTGAAAAGAATCTTCCGCGAGTCACCCACGTaGGCCACAGTGAGGTCTTTA +
Preference number: 5 (lower is better)
Translates to: DTTADAWRTLNRILKRIFRESPT*ATVRSL
Trigger: TAAAGACCTCACTGTGGCCAACGTGGGTGACTCGCG...GAAGATTCTTTTCAAGATCCTGTTCAGGGTCCTCCAGGCATCAGCTGTTGTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
CDS-3UTR CAA 90 bp ACTACATTGGCCAAGGGCACCCTCTGTTCGTCACTGATTATAGACCTAAGACCAATAGCGTTCCCATCTTaGTCACACAGGACCCCGCGC +
Preference number: 5 (lower is better)
Translates to: TTLAKGTLCSSLIIDLRPIAFPS*SHRTPR
Trigger: GCGCGGGGTCCTGTGTGACAAAGATGGGAACGCTAT...TGGTCTTAGGTCTATAATCAGTGACGAACAGAGGGTGCCCTTGGCCAATGTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
CDS-3UTR CAA 90 bp ACTGAGCAGAAAACATGGGCTCAGAAGGACAAAGCATTCTCAGGACAGCTCTGTGGACAGCTCTGTCTCTaGGCAGAGGGTGTTGCCACA +
Preference number: 5 (lower is better)
Translates to: TEQKTWAQKDKAFSGQLCGQLCL*AEGVAT
Trigger: TGTGGCAACACCCTCTGCCAAGAGACAGAGCTGTCC...ACAGAGCTGTCCTGAGAATGCTTTGTCCTTCTGAGCCCATGTTTTCTGCTCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
CDS-3UTR CAA 90 bp GACTATTGGCAATTCGAACTCGAGCTAGCTAGGGAGTCTAGGAAGCCTTGGGTGGCCACGTTGTGGTTCTaGAACTCCCAGGTCTTGGAA +
Preference number: 5 (lower is better)
Translates to: DYWQFELELARESRKPWVATLWF*NSQVLE
Trigger: TTCCAAGACCTGGGAGTTCAAGAACCACAACGTGGC...CACCCAAGGCTTCCTAGACTCCCTAGCTAGCTCGAGTTCGAATTGCCAATAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR CAA 90 bp AGGAAGCAAGGGAAGAGGGTTATCTCTGCTGTGCAGGCAGTTGCCACTGGTCTCGACAATTCCAAAGCTTaGGCAGTGCTGCTTAGGGAA +
Preference number: 5 (lower is better)
Translates to: RKQGKRVISAVQAVATGLDNSKA*AVLLRE
Trigger: TTCCCTAAGCAGCACTGCCAAAGCTTTGGAATTGTC...GAGACCAGTGGCAACTGCCTGCACAGCAGAGATAACCCTCTTCCCTTGCTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS TCA 90 bp TGCACAGCAGGAAAAGCGTCTCGGGTCTCAGCAAGAAGTAGCGCATaGTGCGACCCAGCAGAGACAGCAAAGTCATTGTATCCTCTATCA +
Preference number: 5 (lower is better)
Translates to: CTAGKASRVSARSSA*CDPAETAKSLYPLS
Trigger: TGATAGAGGATACAATGACTTTGCTGTCTCTGCTGGGTCGCATCATGCGCTACTTCTTGCTGAGACCCGAGACGCTTTTCCTGCTGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497343.5
ENST00000498165.6
CDS CCA 90 bp CATGAACTCAGGCTGAAGCTTGTCCAGGTCAAAGGTCAGGATGTCTaGGTCTGGGATGACCACGTTGAGATTTTTCAGCGGATAATCCCC +
Preference number: 5 (lower is better)
Translates to: HELRLKLVQVKGQDV*VWDDHVEIFQRIIP
Trigger: GGGGATTATCCGCTGAAAAATCTCAACGTGGTCATCCCAGACCCAGACATCCTGACCTTTGACCTGGACAAGCTTCAGCCTGAGTTCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000480117.1
ENST00000498165.6
CDS-3UTR CAA 90 bp AGGGAAGAGGGTTATCTCTGCTGTGCAGGCAGTTGCCACTGGTCTCTCATTCTCTCATCCAAGCGCTCCTaGATGAATCGAACTGCTTCT +
Preference number: 5 (lower is better)
Translates to: REEGYLCCAGSCHWSLILSSKRS*MNRTAS
Trigger: AGAAGCAGTTCGATTCATCAAGGAGCGCTTGGATGA...GAGAATGAGAGACCAGTGGCAACTGCCTGCACAGCAGAGATAACCCTCTTCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
CDS-3UTR CAA 90 bp AGTAAACCATTCCAAATCTGCTTCCAAGCTGCTACTGAGCAGAAAACATGGGCTTCTTGGCAGAGGGTGTaGCCACATCAGCCCCTGACC +
Preference number: 5 (lower is better)
Translates to: SKPFQICFQAATEQKTWASWQRV*PHQPLT
Trigger: GGTCAGGGGCTGATGTGGCAACACCCTCTGCCAAGA...AGCCCATGTTTTCTGCTCAGTAGCAGCTTGGAAGCAGATTTGGAATGGTTTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
CDS-3UTR CAA 90 bp ACTGAGCAGAAAACATGGGCTCAGAAGGACAAAGCATTCTCAGGACAGCTCTGTCTGCTGTGCAGGCAGTaGCCACTGGTCTCTCATTCT +
Preference number: 5 (lower is better)
Translates to: TEQKTWAQKDKAFSGQLCLLCRQ*PLVSHS
Trigger: AGAATGAGAGACCAGTGGCAACTGCCTGCACAGCAG...ACAGAGCTGTCCTGAGAATGCTTTGTCCTTCTGAGCCCATGTTTTCTGCTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
CDS-3UTR CAA 90 bp GCAGAAAACATGGGCTCAGAAGGACAAAGCATTCTCAGGACAGCTCTGTCTCTTATGATCTCGGCTACCTaGCCCTTCACCATCTTCACG +
Preference number: 5 (lower is better)
Translates to: AENMGSEGQSILRTALSLMISAT*PFTIFT
Trigger: CGTGAAGATGGTGAAGGGCAAGGTAGCCGAGATCAT...AAGAGACAGAGCTGTCCTGAGAATGCTTTGTCCTTCTGAGCCCATGTTTTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR CAA 90 bp AGTAAACCATTCCAAATCTGCTTCCAAGCTGCTACTGAGCAGAAAACATGGGCTATGGACGGGTGCGTCTaGTTGGCCAGATCCGTGAGA +
Preference number: 5 (lower is better)
Translates to: SKPFQICFQAATEQKTWAMDGCV*LARSVR
Trigger: TCTCACGGATCTGGCCAACAAGACGCACCCGTCCAT...AGCCCATGTTTTCTGCTCAGTAGCAGCTTGGAAGCAGATTTGGAATGGTTTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR CAA 90 bp GCAGAAAACATGGGCTCAGAAGGACAAAGCATTCTCAGGACAGCTCTGTCTCTTGCACCATGGGGACTATaGGCAATTCGAACTCGAGCT +
Preference number: 5 (lower is better)
Translates to: AENMGSEGQSILRTALSLAPWGL*AIRTRA
Trigger: AGCTCGAGTTCGAATTGCCAATAGTCCCCATGGTGC...AAGAGACAGAGCTGTCCTGAGAATGCTTTGTCCTTCTGAGCCCATGTTTTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR CAA 90 bp AGGGAAGAGGGTTATCTCTGCTGTGCAGGCAGTTGCCACTGGTCTCTCATTCTCCTTTCATTGACACAGTaGCAAGAGAGATCTGGCAAC +
Preference number: 5 (lower is better)
Translates to: REEGYLCCAGSCHWSLILLSLTQ*QERSGN
Trigger: GTTGCCAGATCTCTCTTGCAACTGTGTCAATGAAAG...GAGAATGAGAGACCAGTGGCAACTGCCTGCACAGCAGAGATAACCCTCTTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR CAA 90 bp GACACAACAGCTGATGCCTGGAGGACCCTGAACAGGATCTTGAAAAGAATCTTCACCCTCCAGGAGCCATaGAAACTGATGAAACCACCT +
Preference number: 5 (lower is better)
Translates to: DTTADAWRTLNRILKRIFTLQEP*KLMKPP
Trigger: AGGTGGTTTCATCAGTTTCAATGGCTCCTGGAGGGT...GAAGATTCTTTTCAAGATCCTGTTCAGGGTCCTCCAGGCATCAGCTGTTGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
CDS-3UTR CAA 90 bp TGGGTGGTCTGTCCTGTCCACTGTTACAAAGAGAGGACACAACAGCTGATGCCTACCCTGAACAGGATCTaGAAAAGAATCTTCAGGGAG +
Preference number: 5 (lower is better)
Translates to: WVVCPVHCYKERTQQLMPTLNRI*KRIFRE
Trigger: CTCCCTGAAGATTCTTTTCAAGATCCTGTTCAGGGT...AGGCATCAGCTGTTGTGTCCTCTCTTTGTAACAGTGGACAGGACAGACCACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
CDS-3UTR CAA 90 bp GACTATTGGCAATTCGAACTCGAGCTAGCTAGGGAGTCTAGGAAGCCTTGGGTGCTTTTTGGTGGAGCTTaGAACAGGGAAACTGTCTGT +
Preference number: 5 (lower is better)
Translates to: DYWQFELELARESRKPWVLFGGA*NRETVC
Trigger: ACAGACAGTTTCCCTGTTCAAAGCTCCACCAAAAAG...CACCCAAGGCTTCCTAGACTCCCTAGCTAGCTCGAGTTCGAATTGCCAATAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR CAA 90 bp AGGAAGCAAGGGAAGAGGGTTATCTCTGCTGTGCAGGCAGTTGCCACTGGTCTCGAGATTAACTTGGATTaGGCAAATGTTAGGTGGGAT +
Preference number: 5 (lower is better)
Translates to: RKQGKRVISAVQAVATGLEINLD*ANVRWD
Trigger: ATCCCACCTAACATTTGCCAAATCCAAGTTAATCTC...GAGACCAGTGGCAACTGCCTGCACAGCAGAGATAACCCTCTTCCCTTGCTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR CAA 90 bp AACCACAAATGCTCACAGGGAAAGAACAAAACCAGGTGGATACAGAGGGCTGGGCATGGAGAGATGTTCTaGCTCCTCCCTTTTCTCCTT +
Preference number: 5 (lower is better)
Translates to: NHKCSQGKNKTRWIQRAGHGEMF*LLPFLL
Trigger: AAGGAGAAAAGGGAGGAGCAAGAACATCTCTCCATG...CCCAGCCCTCTGTATCCACCTGGTTTTGTTCTTTCCCTGTGAGCATTTGTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS CCA 90 bp CATATTCAGCTGCAGTCTGAGACTGGGAAGAAAAAGAGGTTTAATTaGATTTCCAGTTCCACATGGCTGGGGAGGCCTCAGAATCATGGC +
Preference number: 5 (lower is better)
Translates to: HIQLQSETGKKKRFN*ISSSTWLGRPQNHG
Trigger: GCCATGATTCTGAGGCCTCCCCAGCCATGTGGAACTGGAAATCCAATTAAACCTCTTTTTCTTCCCAGTCTCAGACTGCAGCTGAATATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464260.5
CDS CCA 90 bp TTCTTTGTCTTTCTCGTAGTCCTGAAGATGCTGTTTAAGGGCCTCTaGGAGTCGAGATTTTACATATTCAGCTGCAGTCTCTCCCCCGTG +
Preference number: 5 (lower is better)
Translates to: FFVFLVVLKMLFKGL*ESRFYIFSCSLSPV
Trigger: CACGGGGGAGAGACTGCAGCTGAATATGTAAAATCTCGACTCCCAGAGGCCCTTAAACAGCATCTTCAGGACTACGAGAAAGACAAAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497343.5
ENST00000498165.6
CDS-3UTR CAA 90 bp ACTGAGCAGAAAACATGGGCTCAGAAGGACAAAGCATTCTCAGGACAGCTCTGTGAGCAATCAAACACGTaGTGCCTGCTTCATCATAGG +
Preference number: 5 (lower is better)
Translates to: TEQKTWAQKDKAFSGQLCEQSNT*CLLHHR
Trigger: CCTATGATGAAGCAGGCACAACGTGTTTGATTGCTC...ACAGAGCTGTCCTGAGAATGCTTTGTCCTTCTGAGCCCATGTTTTCTGCTCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
CDS-3UTR CAA 90 bp ACTACATTGGCCAAGGGCACCCTCTGTTCGTCACTGATTATAGACCTAAGACCATCATCCAAGCGCTCCTaGATGAATCGAACTGCTTCT +
Preference number: 5 (lower is better)
Translates to: TTLAKGTLCSSLIIDLRPSSKRS*MNRTAS
Trigger: AGAAGCAGTTCGATTCATCAAGGAGCGCTTGGATGA...TGGTCTTAGGTCTATAATCAGTGACGAACAGAGGGTGCCCTTGGCCAATGTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
CDS-3UTR CAA 90 bp ACAGAGGGCTGGGAGGCAACGGAAGTTTCGTTTGGCTGTTTGAGTCACCTTAGGCACTTCTTACATGTGTaGAAAAAGCAGGCATGTTCT +
Preference number: 5 (lower is better)
Translates to: TEGWEATEVSFGCLSHLRHFLHV*KKQACS
Trigger: AGAACATGCCTGCTTTTTCAACACATGTAAGAAGTG...CCTAAGGTGACTCAAACAGCCAAACGAAACTTCCGTTGCCTCCCAGCCCTCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464260.5
CDS-3UTR CAA 90 bp AACCACAAATGCTCACAGGGAAAGAACAAAACCAGGTGGATACAGAGGGCTGGGGTTTCGTTTGGCTGTTaGAGTCACCTTAGGCAAAGA +
Preference number: 5 (lower is better)
Translates to: NHKCSQGKNKTRWIQRAGVSFGC*SHLRQR
Trigger: TCTTTGCCTAAGGTGACTCAAACAGCCAAACGAAAC...CCCAGCCCTCTGTATCCACCTGGTTTTGTTCTTTCCCTGTGAGCATTTGTGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR CAA 90 bp TGGGTGGTCTGTCCTGTCCACTGTTACAAAGAGAGGACACAACAGCTGATGCCTGTCTTGGGAACAGCTTaGGAGCTTTCTATATGTGTT +
Preference number: 5 (lower is better)
Translates to: WVVCPVHCYKERTQQLMPVLGTA*ELSICV
Trigger: AACACATATAGAAAGCTCCAAAGCTGTTCCCAAGAC...AGGCATCAGCTGTTGTGTCCTCTCTTTGTAACAGTGGACAGGACAGACCACCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR CAA 90 bp AGGGAAGAGGGTTATCTCTGCTGTGCAGGCAGTTGCCACTGGTCTCTCATTCTCGCTCATGCTTCTAAGTaGCAAATTGTACTGCTACTA +
Preference number: 5 (lower is better)
Translates to: REEGYLCCAGSCHWSLILAHASK*QIVLLL
Trigger: TAGTAGCAGTACAATTTGCAACTTAGAAGCATGAGC...GAGAATGAGAGACCAGTGGCAACTGCCTGCACAGCAGAGATAACCCTCTTCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR CAA 90 bp AACCACAAATGCTCACAGGGAAAGAACAAAACCAGGTGGATACAGAGGGCTGGGCCTAGCCTCAACAGTTaGCTGTTCAACAGTGGTAAA +
Preference number: 5 (lower is better)
Translates to: NHKCSQGKNKTRWIQRAGPSLNS*LFNSGK
Trigger: TTTACCACTGTTGAACAGCAAACTGTTGAGGCTAGG...CCCAGCCCTCTGTATCCACCTGGTTTTGTTCTTTCCCTGTGAGCATTTGTGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR CAA 90 bp GACTATTGGCAATTCGAACTCGAGCTAGCTAGGGAGTCTAGGAAGCCTTGGGTGATCAGAGGAGTATTCTaGCTTAATGTCCCATGGTTC +
Preference number: 5 (lower is better)
Translates to: DYWQFELELARESRKPWVIRGVF*LNVPWF
Trigger: GAACCATGGGACATTAAGCAAGAATACTCCTCTGAT...CACCCAAGGCTTCCTAGACTCCCTAGCTAGCTCGAGTTCGAATTGCCAATAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS CCA 90 bp CTGGGAAGAAAAAGAGGTTTAATTGGATTTCCAGTTCCACATGGCTaGGGAGGCCTCAGAATCATGGCAGGAGATGAAAGGCACTTCTTA +
Preference number: 5 (lower is better)
Translates to: LGRKRGLIGFPVPHG*GGLRIMAGDERHFL
Trigger: TAAGAAGTGCCTTTCATCTCCTGCCATGATTCTGAGGCCTCCCCAGCCATGTGGAACTGGAAATCCAATTAAACCTCTTTTTCTTCCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464260.5
CDS CCA 90 bp TTCTTTGTCTTTCTCGTAGTCCTGAAGATGCTGTTTAAGGGCCTCTaGGAGTCGAGATTTTACATATTCAGCTGCAGTCCTGCGCCAGAT +
Preference number: 5 (lower is better)
Translates to: FFVFLVVLKMLFKGL*ESRFYIFSCSPAPD
Trigger: ATCTGGCGCAGGACTGCAGCTGAATATGTAAAATCTCGACTCCCAGAGGCCCTTAAACAGCATCTTCAGGACTACGAGAAAGACAAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480117.1
CDS-3UTR CAA 90 bp AGAACAAAACCAGGTGGATACAGAGGGCTGGGAGGCAACGGAAGTTTCGTTTGGGCATTTCTCGGTCAATaGACAAAATCTGCTGTTCAA +
Preference number: 5 (lower is better)
Translates to: RTKPGGYRGLGGNGSFVWAFLGQ*TKSAVQ
Trigger: TTGAACAGCAGATTTTGTCAATTGACCGAGAAATGC...CCAAACGAAACTTCCGTTGCCTCCCAGCCCTCTGTATCCACCTGGTTTTGTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR CAA 90 bp CAAAATAGTAAACCATTCCAAATCTGCTTCCAAGCTGCTACTGAGCAGAAAACAATAGCGTTCCCATCTTaGTCACACAGGACCCCGCGC +
Preference number: 5 (lower is better)
Translates to: QNSKPFQICFQAATEQKTIAFPS*SHRTPR
Trigger: GCGCGGGGTCCTGTGTGACAAAGATGGGAACGCTAT...TGTTTTCTGCTCAGTAGCAGCTTGGAAGCAGATTTGGAATGGTTTACTATTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
CDS-3UTR CAA 90 bp CTCAGTCCACAGCAAGGAATAAAATGCAGCCACTGGTTACCAGTACTATGTACAACCCTCCAGGAGCCATaGAAACTGATGAAACCACCT +
Preference number: 5 (lower is better)
Translates to: LSPQQGIKCSHWLPVLCTTLQEP*KLMKPP
Trigger: AGGTGGTTTCATCAGTTTCAATGGCTCCTGGAGGGT...TGTACATAGTACTGGTAACCAGTGGCTGCATTTTATTCCTTGCTGTGGACTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR CAA 90 bp GACACAACAGCTGATGCCTGGAGGACCCTGAACAGGATCTTGAAAAGAATCTTCACCCTGAACAGGATCTaGAAAAGAATCTTCAGGGAG +
Preference number: 5 (lower is better)
Translates to: DTTADAWRTLNRILKRIFTLNRI*KRIFRE
Trigger: CTCCCTGAAGATTCTTTTCAAGATCCTGTTCAGGGT...GAAGATTCTTTTCAAGATCCTGTTCAGGGTCCTCCAGGCATCAGCTGTTGTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
CDS-3UTR CAA 90 bp CAAAATAGTAAACCATTCCAAATCTGCTTCCAAGCTGCTACTGAGCAGAAAACAGGACAGCTCTGTCTCTaGGCAGAGGGTGTTGCCACA +
Preference number: 5 (lower is better)
Translates to: QNSKPFQICFQAATEQKTGQLCL*AEGVAT
Trigger: TGTGGCAACACCCTCTGCCAAGAGACAGAGCTGTCC...TGTTTTCTGCTCAGTAGCAGCTTGGAAGCAGATTTGGAATGGTTTACTATTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
CDS-3UTR CAA 90 bp AGGGAAGAGGGTTATCTCTGCTGTGCAGGCAGTTGCCACTGGTCTCTCATTCTCTTCCTTCATCTACTGTaGAAAATGGAAGGAATCATG +
Preference number: 5 (lower is better)
Translates to: REEGYLCCAGSCHWSLILFLHLL*KMEGIM
Trigger: CATGATTCCTTCCATTTTCAACAGTAGATGAAGGAA...GAGAATGAGAGACCAGTGGCAACTGCCTGCACAGCAGAGATAACCCTCTTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR CAA 90 bp CACTCCTTTCTCAATGCAAACAGCTTACTTGCCAGGGAACACTGTGACTCATTCATGCAAACAGCTTACTaGCCAGGGAACACTGTGACT +
Preference number: 5 (lower is better)
Translates to: HSFLNANSLLAREHCDSFMQTAY*PGNTVT
Trigger: AGTCACAGTGTTCCCTGGCAAGTAAGCTGTTTGCAT...GAATGAGTCACAGTGTTCCCTGGCAAGTAAGCTGTTTGCATTGAGAAAGGAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR CAA 90 bp TCTGTTGGTGAATTTAACAGCTGCCTATTACATATGGTAAGGACTAAGCAAAAGAGGCCACGGGGCGGTTaGTATTTGCCTGGGGAAAGC +
Preference number: 5 (lower is better)
Translates to: SVGEFNSCLLHMVRTKQKRPRGG*YLPGES
Trigger: GCTTTCCCCAGGCAAATACAAACCGCCCCGTGGCCT...CTTTTGCTTAGTCCTTACCATATGTAATAGGCAGCTGTTAAATTCACCAACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR CAA 90 bp GCACCTGGCTTCAAGGAACACACATACAGTTATAGGCTGCTGCTTCTCAGAACAGTTTCGTTTGGCTGTTaGAGTCACCTTAGGCAAAGA +
Preference number: 5 (lower is better)
Translates to: APGFKEHTYSYRLLLLRTVSFGC*SHLRQR
Trigger: TCTTTGCCTAAGGTGACTCAAACAGCCAAACGAAAC...TGTTCTGAGAAGCAGCAGCCTATAACTGTATGTGTGTTCCTTGAAGCCAGGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR CAA 90 bp ACCACAAATGCTCACAGGGAAAGAACAAAACCAGGTGGATACAGAGGGCTGGGAGAGCATCTTTGGAACTaGTGTTCTTTGGAACACACT +
Preference number: 5 (lower is better)
Translates to: TTNAHRERTKPGGYRGLGEHLWN*CSLEHT
Trigger: AGTGTGTTCCAAAGAACACAAGTTCCAAAGATGCTC...TCCCAGCCCTCTGTATCCACCTGGTTTTGTTCTTTCCCTGTGAGCATTTGTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS CCA 90 bp TTCTTTGTCTTTCTCGTAGTCCTGAAGATGCTGTTTAAGGGCCTCTaGGAGTCGAGATTTTACATATTCAGCTGCAGTCTGAGACTGGGA +
Preference number: 5 (lower is better)
Translates to: FFVFLVVLKMLFKGL*ESRFYIFSCSLRLG
Trigger: TCCCAGTCTCAGACTGCAGCTGAATATGTAAAATCTCGACTCCCAGAGGCCCTTAAACAGCATCTTCAGGACTACGAGAAAGACAAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464260.5
CDS-3UTR CAA 90 bp ACTACATTGGCCAAGGGCACCCTCTGTTCGTCACTGATTATAGACCTAAGACCAATTCAGCTGCAGTTGTaGAAAAAGCAGGCATGTTCT +
Preference number: 5 (lower is better)
Translates to: TTLAKGTLCSSLIIDLRPIQLQL*KKQACS
Trigger: AGAACATGCCTGCTTTTTCAACAACTGCAGCTGAAT...TGGTCTTAGGTCTATAATCAGTGACGAACAGAGGGTGCCCTTGGCCAATGTAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295839.9
CDS-3UTR CAA 90 bp AGTAAACCATTCCAAATCTGCTTCCAAGCTGCTACTGAGCAGAAAACATGGGCTTCATCCAAGCGCTCCTaGATGAATCGAACTGCTTCT +
Preference number: 5 (lower is better)
Translates to: SKPFQICFQAATEQKTWASSKRS*MNRTAS
Trigger: AGAAGCAGTTCGATTCATCAAGGAGCGCTTGGATGA...AGCCCATGTTTTCTGCTCAGTAGCAGCTTGGAAGCAGATTTGGAATGGTTTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
CDS-3UTR CAA 90 bp ATCCTAATTACAACTCCCACACTTTTCACTAAATTAAAAGAGACCAGTGTGTTGTCTTGGCAGAGGGTGTaGCCACATCAGCCCCTGACC +
Preference number: 5 (lower is better)
Translates to: ILITTPTLFTKLKETSVLSWQRV*PHQPLT
Trigger: GGTCAGGGGCTGATGTGGCAACACCCTCTGCCAAGA...CAACACACTGGTCTCTTTTAATTTAGTGAAAAGTGTGGGAGTTGTAATTAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
CDS-3UTR CAA 90 bp GCAGAAAACATGGGCTCAGAAGGACAAAGCATTCTCAGGACAGCTCTGTCTCTTAAATCAGGGTATCTGTaGGTGAATTTAACAGCTGCC +
Preference number: 5 (lower is better)
Translates to: AENMGSEGQSILRTALSLKSGYL*VNLTAA
Trigger: GGCAGCTGTTAAATTCACCAACAGATACCCTGATTT...AAGAGACAGAGCTGTCCTGAGAATGCTTTGTCCTTCTGAGCCCATGTTTTCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR CAA 90 bp GGGATTCCATGTCTGGGGTGGATGATCCTAATTACAACTCCCACACTTTTCACTCTATTACATCCGCCTTaGCTTCTGCATGAACACGTT +
Preference number: 5 (lower is better)
Translates to: GIPCLGWMILITTPTLFTLLHPP*LLHEHV
Trigger: AACGTGTTCATGCAGAAGCAAAGGCGGATGTAATAG...AGTGAAAAGTGTGGGAGTTGTAATTAGGATCATCCACCCCAGACATGGAATCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR CAA 90 bp ACTGAGCAGAAAACATGGGCTCAGAAGGACAAAGCATTCTCAGGACAGCTCTGTTCTTCTGCAGTTTGCTaGAGTGTTGGCAAGAAATTC +
Preference number: 5 (lower is better)
Translates to: TEQKTWAQKDKAFSGQLCSSAVC*SVGKKF
Trigger: GAATTTCTTGCCAACACTCAAGCAAACTGCAGAAGA...ACAGAGCTGTCCTGAGAATGCTTTGTCCTTCTGAGCCCATGTTTTCTGCTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR CAA 90 bp TCTGTTGGTGAATTTAACAGCTGCCTATTACATATGGTAAGGACTAAGCAAAAGGACACGCCATGCATCTaGAGTGACCGTGCACTGCCA +
Preference number: 5 (lower is better)
Translates to: SVGEFNSCLLHMVRTKQKDTPCI*SDRALP
Trigger: TGGCAGTGCACGGTCACTCAAGATGCATGGCGTGTC...CTTTTGCTTAGTCCTTACCATATGTAATAGGCAGCTGTTAAATTCACCAACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR CAA 90 bp CAGTTTCTTAACTACATTGGCCAAGGGCACCCTCTGTTCGTCACTGATTATAGAACCCTGAACAGGATCTaGAAAAGAATCTTCAGGGAG +
Preference number: 5 (lower is better)
Translates to: QFLNYIGQGHPLFVTDYRTLNRI*KRIFRE
Trigger: CTCCCTGAAGATTCTTTTCAAGATCCTGTTCAGGGT...TCTATAATCAGTGACGAACAGAGGGTGCCCTTGGCCAATGTAGTTAAGAAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
CDS-3UTR CAA 90 bp GGGATTCCATGTCTGGGGTGGATGATCCTAATTACAACTCCCACACTTTTCACTAAATCAGGGTATCTGTaGGTGAATTTAACAGCTGCC +
Preference number: 5 (lower is better)
Translates to: GIPCLGWMILITTPTLFTKSGYL*VNLTAA
Trigger: GGCAGCTGTTAAATTCACCAACAGATACCCTGATTT...AGTGAAAAGTGTGGGAGTTGTAATTAGGATCATCCACCCCAGACATGGAATCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR CAA 90 bp AAGAAAGTTAAGTGCTTGGAGAAATCAAGACAGATTGCAGCCCTCCACATCTACATGCAAACAGCTTACTaGCCAGGGAACACTGTGACT +
Preference number: 5 (lower is better)
Translates to: KKVKCLEKSRQIAALHIYMQTAY*PGNTVT
Trigger: AGTCACAGTGTTCCCTGGCAAGTAAGCTGTTTGCAT...GTAGATGTGGAGGGCTGCAATCTGTCTTGATTTCTCCAAGCACTTAACTTTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR CAA 90 bp TCTGTTGGTGAATTTAACAGCTGCCTATTACATATGGTAAGGACTAAGCAAAAGTTGAACTCCCAGGTCTaGGAAAACTCGGCCTCGAGC +
Preference number: 5 (lower is better)
Translates to: SVGEFNSCLLHMVRTKQKLNSQV*ENSASS
Trigger: GCTCGAGGCCGAGTTTTCCAAGACCTGGGAGTTCAA...CTTTTGCTTAGTCCTTACCATATGTAATAGGCAGCTGTTAAATTCACCAACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR CAA 90 bp ATCCTAATTACAACTCCCACACTTTTCACTAAATTAAAAGAGACCAGTGTGTTGGACGGGTGCGTCTTGTaGGCCAGATCCGTGAGAACT +
Preference number: 5 (lower is better)
Translates to: ILITTPTLFTKLKETSVLDGCVL*ARSVRT
Trigger: AGTTCTCACGGATCTGGCCAACAAGACGCACCCGTC...CAACACACTGGTCTCTTTTAATTTAGTGAAAAGTGTGGGAGTTGTAATTAGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR CAA 90 bp CAGTTTCTTAACTACATTGGCCAAGGGCACCCTCTGTTCGTCACTGATTATAGAAAACCATCCCAAAATTaGGCACCATGGGGACTATTG +
Preference number: 5 (lower is better)
Translates to: QFLNYIGQGHPLFVTDYRKPSQN*APWGLL
Trigger: CAATAGTCCCCATGGTGCCAAATTTTGGGATGGTTT...TCTATAATCAGTGACGAACAGAGGGTGCCCTTGGCCAATGTAGTTAAGAAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR CAA 90 bp GCACCTGGCTTCAAGGAACACACATACAGTTATAGGCTGCTGCTTCTCAGAACAGCTATGGCAGGGCTCTaGCTCATTATTCATATAAAA +
Preference number: 5 (lower is better)
Translates to: APGFKEHTYSYRLLLLRTAMAGL*LIIHIK
Trigger: TTTTATATGAATAATGAGCAAGAGCCCTGCCATAGC...TGTTCTGAGAAGCAGCAGCCTATAACTGTATGTGTGTTCCTTGAAGCCAGGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR CAA 90 bp GGGATTCCATGTCTGGGGTGGATGATCCTAATTACAACTCCCACACTTTTCACTGCATTTCTCGGTCAATaGACAAAATCTGCTGTTCAA +
Preference number: 5 (lower is better)
Translates to: GIPCLGWMILITTPTLFTAFLGQ*TKSAVQ
Trigger: TTGAACAGCAGATTTTGTCAATTGACCGAGAAATGC...AGTGAAAAGTGTGGGAGTTGTAATTAGGATCATCCACCCCAGACATGGAATCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000498165.6
CDS-3UTR CAA 90 bp CTCAGTCCACAGCAAGGAATAAAATGCAGCCACTGGTTACCAGTACTATGTACATCAGAGTTAATTGCCTaGGGGCAAGTTGGTCATATA +
Preference number: 5 (lower is better)
Translates to: LSPQQGIKCSHWLPVLCTSELIA*GQVGHI
Trigger: TATATGACCAACTTGCCCCAAGGCAATTAACTCTGA...TGTACATAGTACTGGTAACCAGTGGCTGCATTTTATTCCTTGCTGTGGACTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR CAA 90 bp CCATGTCTGGGGTGGATGATCCTAATTACAACTCCCACACTTTTCACTAAATTACTTACAGTAATCTGCTaGTGCTCAATGTCCTCGGAG +
Preference number: 5 (lower is better)
Translates to: PCLGWMILITTPTLFTKLLTVIC*CSMSSE
Trigger: CTCCGAGGACATTGAGCACAAGCAGATTACTGTAAG...TAATTTAGTGAAAAGTGTGGGAGTTGTAATTAGGATCATCCACCCCAGACATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR CAA 90 bp GCACCTGGCTTCAAGGAACACACATACAGTTATAGGCTGCTGCTTCTCAGAACATTACTCTCCCTTGATTaGGGCTTCTGTATTTTCTTA +
Preference number: 5 (lower is better)
Translates to: APGFKEHTYSYRLLLLRTLLSLD*GFCIFL
Trigger: TAAGAAAATACAGAAGCCCAAATCAAGGGAGAGTAA...TGTTCTGAGAAGCAGCAGCCTATAACTGTATGTGTGTTCCTTGAAGCCAGGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR CAA 90 bp TCCCCTAACGTGGTTTCTTGGTCACGTAAGATGAAAAATCAGGGTATCTGTTGGTTTACTGTCCACGATTaGGAACGTGAATGGAATCTG +
Preference number: 5 (lower is better)
Translates to: SPNVVSWSRKMKNQGICWFTVHD*EREWNL
Trigger: CAGATTCCATTCACGTTCCAAATCGTGGACAGTAAA...CCAACAGATACCCTGATTTTTCATCTTACGTGACCAAGAAACCACGTTAGGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS CCA 90 bp GTCAAAGCAGAGTCTGATCTTTTCTTTCTTAGGAAATCTGAGTCATaGCTTGATTTGGACTTGCTGACTTGCTGGTATACTGTTTCCCCT +
Preference number: 5 (lower is better)
Translates to: VKAESDLFFLRKSES*LDLDLLTCWYTVSP
Trigger: AGGGGAAACAGTATACCAGCAAGTCAGCAAGTCCAAATCAAGCCATGACTCAGATTTCCTAAGAAAGAAAAGATCAGACTCTGCTTTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480117.1
CDS-3UTR CAA 90 bp TCCCCTAACGTGGTTTCTTGGTCACGTAAGATGAAAAATCAGGGTATCTGTTGGGCATTTCTCGGTCAATaGACAAAATCTGCTGTTCAA +
Preference number: 5 (lower is better)
Translates to: SPNVVSWSRKMKNQGICWAFLGQ*TKSAVQ
Trigger: TTGAACAGCAGATTTTGTCAATTGACCGAGAAATGC...CCAACAGATACCCTGATTTTTCATCTTACGTGACCAAGAAACCACGTTAGGGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR CAA 90 bp GGGATTCCATGTCTGGGGTGGATGATCCTAATTACAACTCCCACACTTTTCACTTTCCTTCATCTACTGTaGAAAATGGAAGGAATCATG +
Preference number: 5 (lower is better)
Translates to: GIPCLGWMILITTPTLFTFLHLL*KMEGIM
Trigger: CATGATTCCTTCCATTTTCAACAGTAGATGAAGGAA...AGTGAAAAGTGTGGGAGTTGTAATTAGGATCATCCACCCCAGACATGGAATCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR CAA 90 bp AAGAAAGTTAAGTGCTTGGAGAAATCAAGACAGATTGCAGCCCTCCACATCTACATTTGCAACCAAATGTaGAAGACTGCTGCCTTTCCA +
Preference number: 5 (lower is better)
Translates to: KKVKCLEKSRQIAALHIYICNQM*KTAAFP
Trigger: TGGAAAGGCAGCAGTCTTCAACATTTGGTTGCAAAT...GTAGATGTGGAGGGCTGCAATCTGTCTTGATTTCTCCAAGCACTTAACTTTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR CAA 90 bp GGGATTCCATGTCTGGGGTGGATGATCCTAATTACAACTCCCACACTTTTCACTGACAGTAGATATTTGTaGTGTTTTTCTCTCCTCACA +
Preference number: 5 (lower is better)
Translates to: GIPCLGWMILITTPTLFTDSRYL*CFSLLT
Trigger: TGTGAGGAGAGAAAAACACAACAAATATCTACTGTC...AGTGAAAAGTGTGGGAGTTGTAATTAGGATCATCCACCCCAGACATGGAATCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR CAA 90 bp CAGTTTCTTAACTACATTGGCCAAGGGCACCCTCTGTTCGTCACTGATTATAGAATTATCTTCTGCAGTTaGCTTGAGTGTTGGCAAGAA +
Preference number: 5 (lower is better)
Translates to: QFLNYIGQGHPLFVTDYRIIFCS*LECWQE
Trigger: TTCTTGCCAACACTCAAGCAAACTGCAGAAGATAAT...TCTATAATCAGTGACGAACAGAGGGTGCCCTTGGCCAATGTAGTTAAGAAACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR CAA 90 bp AGTAAACCATTCCAAATCTGCTTCCAAGCTGCTACTGAGCAGAAAACATGGGCTTTTCGCCAAGCCTTGTaGTATTTATCATGGATGGTT +
Preference number: 5 (lower is better)
Translates to: SKPFQICFQAATEQKTWAFRQAL*YLSWMV
Trigger: AACCATCCATGATAAATACAACAAGGCTTGGCGAAA...AGCCCATGTTTTCTGCTCAGTAGCAGCTTGGAAGCAGATTTGGAATGGTTTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR CAA 90 bp AGTAAACCATTCCAAATCTGCTTCCAAGCTGCTACTGAGCAGAAAACATGGGCTAATATGAGGCTGCTGTaGGTCATATTAAGTCATACT +
Preference number: 5 (lower is better)
Translates to: SKPFQICFQAATEQKTWANMRLL*VILSHT
Trigger: AGTATGACTTAATATGACCAACAGCAGCCTCATATT...AGCCCATGTTTTCTGCTCAGTAGCAGCTTGGAAGCAGATTTGGAATGGTTTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR CAA 90 bp AGTAAACCATTCCAAATCTGCTTCCAAGCTGCTACTGAGCAGAAAACATGGGCTCCCATTGGGTCAATATaGAGTGTTATAATATCTCTG +
Preference number: 5 (lower is better)
Translates to: SKPFQICFQAATEQKTWAPIGSI*SVIISL
Trigger: CAGAGATATTATAACACTCAATATTGACCCAATGGG...AGCCCATGTTTTCTGCTCAGTAGCAGCTTGGAAGCAGATTTGGAATGGTTTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR CAA 90 bp TCCACAGAGCAGGATTTAGACGTTTTCATTACTACACGAAGAAGTCATCATTTGATTTGCAACCAAATGTaGAAGACTGCTGCCTTTCCA +
Preference number: 5 (lower is better)
Translates to: STEQDLDVFITTRRSHHLICNQM*KTAAFP
Trigger: TGGAAAGGCAGCAGTCTTCAACATTTGGTTGCAAAT...CAAATGATGACTTCTTCGTGTAGTAATGAAAACGTCTAAATCCTGCTCTGTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR CAA 90 bp ATCCTAATTACAACTCCCACACTTTTCACTAAATTAAAAGAGACCAGTGTGTTGAGAAATCAAGACAGATaGCAGCCCTCCACATCTACA +
Preference number: 5 (lower is better)
Translates to: ILITTPTLFTKLKETSVLRNQDR*QPSTST
Trigger: TGTAGATGTGGAGGGCTGCAATCTGTCTTGATTTCT...CAACACACTGGTCTCTTTTAATTTAGTGAAAAGTGTGGGAGTTGTAATTAGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464260.5
ENST00000498165.6
CDS-3UTR CAA 90 bp CAAAATAGTAAACCATTCCAAATCTGCTTCCAAGCTGCTACTGAGCAGAAAACACTCATGCAATCCTGTTaGCCATTTACCCAAAATGAT +
Preference number: 5 (lower is better)
Translates to: QNSKPFQICFQAATEQKTLMQSC*PFTQND
Trigger: ATCATTTTGGGTAAATGGCAAACAGGATTGCATGAG...TGTTTTCTGCTCAGTAGCAGCTTGGAAGCAGATTTGGAATGGTTTACTATTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR CAA 90 bp CAAAATAGTAAACCATTCCAAATCTGCTTCCAAGCTGCTACTGAGCAGAAAACAACTGACAGTAGATATTaGTTGTGTTTTTCTCTCCTC +
Preference number: 5 (lower is better)
Translates to: QNSKPFQICFQAATEQKTTDSRY*LCFSLL
Trigger: GAGGAGAGAAAAACACAACAAATATCTACTGTCAGT...TGTTTTCTGCTCAGTAGCAGCTTGGAAGCAGATTTGGAATGGTTTACTATTTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS-3UTR CAA 90 bp TCTGTTGGTGAATTTAACAGCTGCCTATTACATATGGTAAGGACTAAGCAAAAGTTTAGAAGAGCATCTTaGGAACTTGTGTTCTTTGGA +
Preference number: 5 (lower is better)
Translates to: SVGEFNSCLLHMVRTKQKFRRAS*ELVFFG
Trigger: TCCAAAGAACACAAGTTCCAAAGATGCTCTTCTAAA...CTTTTGCTTAGTCCTTACCATATGTAATAGGCAGCTGTTAAATTCACCAACAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498165.6
CDS TCA 72 bp ATCAAGTTAAAGTTGCGCTGGGCGGGTCTGCCGCGGTaGGCGGGAGAGTTCAGGGGCGCCGGCGCCCGCGCG +
Preference number: 6 (lower is better)
Translates to: IKLKLRWAGLPR*AGEFRGAGARA
Trigger: CGCGCGGGCGCCGGCGCCCCTGAACTCTCCCGCTCACCGCGGCAGACCCGCCCAGCGCAACTTTAACTTGAT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497343.5
CDS CCA 72 bp GCCAGATCCGTGAGAACTTCGAAGCGGTCCTCCATGTaGTCTCTCCGGCCCTGGATGGAGTACACCGCCACG +
Preference number: 6 (lower is better)
Translates to: ARSVRTSKRSSM*SLRPWMEYTAT
Trigger: CGTGGCGGTGTACTCCATCCAGGGCCGGAGAGACCACATGGAGGACCGCTTCGAAGTTCTCACGGATCTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497343.5
ENST00000498165.6
CDS CAA 72 bp CCCCCGAGTCGATCGTTCTGCATGATCTCGGCTACCTaGCCCTTCACCATCTTCACGGCGTCCCGGCTGGAC +
Preference number: 6 (lower is better)
Translates to: PPSRSFCMISAT*PFTIFTASRLD
Trigger: GTCCAGCCGGGACGCCGTGAAGATGGTGAAGGGCAAGGTAGCCGAGATCATGCAGAACGATCGACTCGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497343.5
ENST00000498165.6
CDS CAA 90 bp TCTCCCCCGTGCCCGTCGAAGATCCCGAAGATGGACGGGTGCGTCTaGTTGGCCAGATCCGTGAGAACTTCGAAGCGGTCCTCCATGTGG +
Preference number: 6 (lower is better)
Translates to: SPPCPSKIPKMDGCV*LARSVRTSKRSSMW
Trigger: CCACATGGAGGACCGCTTCGAAGTTCTCACGGATCTGGCCAACAAGACGCACCCGTCCATCTTCGGGATCTTCGACGGGCACGGGGGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497343.5
ENST00000498165.6
CDS GCA 72 bp CCCCCGTGCCCGTCGAAGATCCCGAAGATGGACGGGTaGGTCTTGTTGGCCAGATCCGTGAGAACTTCGAAG +
Preference number: 6 (lower is better)
Translates to: PPCPSKIPKMDG*VLLARSVRTSK
Trigger: CTTCGAAGTTCTCACGGATCTGGCCAACAAGACGCACCCGTCCATCTTCGGGATCTTCGACGGGCACGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497343.5
ENST00000498165.6
CDS CCA 72 bp CTACCTTGCCCTTCACCATCTTCACGGCGTCCCGGCTaGACTTCACGATGGTCTTCACCTCGTCGGTGTGGA +
Preference number: 6 (lower is better)
Translates to: LPCPSPSSRRPG*TSRWSSPRRCG
Trigger: TCCACACCGACGAGGTGAAGACCATCGTGAAGTCCAGCCGGGACGCCGTGAAGATGGTGAAGGGCAAGGTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497343.5
ENST00000498165.6
CDS CAA 72 bp CGGCCCTGGATGGAGTACACCGCCACGTTGTGGTTCTaGAACTCCCAGGTCTTGGAAAACTCGGCCTCGAGC +
Preference number: 6 (lower is better)
Translates to: RPWMEYTATLWF*NSQVLENSASS
Trigger: GCTCGAGGCCGAGTTTTCCAAGACCTGGGAGTTCAAGAACCACAACGTGGCGGTGTACTCCATCCAGGGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497343.5
ENST00000498165.6
CDS CAA 72 bp TGCCCGTCGAAGATCCCGAAGATGGACGGGTGCGTCTaGTTGGCCAGATCCGTGAGAACTTCGAAGCGGTCC +
Preference number: 6 (lower is better)
Translates to: CPSKIPKMDGCV*LARSVRTSKRS
Trigger: GGACCGCTTCGAAGTTCTCACGGATCTGGCCAACAAGACGCACCCGTCCATCTTCGGGATCTTCGACGGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497343.5
ENST00000498165.6
CDS CAA 90 bp TGGTCTCTCCGGCCCTGGATGGAGTACACCGCCACGTTGTGGTTCTaGAACTCCCAGGTCTTGGAAAACTCGGCCTCGAGCACATCAAGC +
Preference number: 6 (lower is better)
Translates to: WSLRPWMEYTATLWF*NSQVLENSASSTSS
Trigger: GCTTGATGTGCTCGAGGCCGAGTTTTCCAAGACCTGGGAGTTCAAGAACCACAACGTGGCGGTGTACTCCATCCAGGGCCGGAGAGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497343.5
ENST00000498165.6
CDS TCA 72 bp GGCCCTGGATGGAGTACACCGCCACGTTGTGGTTCTTaGACTCCCAGGTCTTGGAAAACTCGGCCTCGAGCA +
Preference number: 6 (lower is better)
Translates to: GPGWSTPPRCGS*TPRSWKTRPRA
Trigger: TGCTCGAGGCCGAGTTTTCCAAGACCTGGGAGTTCAAGAACCACAACGTGGCGGTGTACTCCATCCAGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497343.5
ENST00000498165.6
CDS TCA 72 bp CGAAGATGGACGGGTGCGTCTTGTTGGCCAGATCCGTaGGAACTTCGAAGCGGTCCTCCATGTGGTCTCTCC +
Preference number: 6 (lower is better)
Translates to: RRWTGASCWPDP*ELRSGPPCGLS
Trigger: GGAGAGACCACATGGAGGACCGCTTCGAAGTTCTCACGGATCTGGCCAACAAGACGCACCCGTCCATCTTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497343.5
ENST00000498165.6
CDS CCA 72 bp TCTCTCCGGCCCTGGATGGAGTACACCGCCACGTTGTaGTTCTTGAACTCCCAGGTCTTGGAAAACTCGGCC +
Preference number: 6 (lower is better)
Translates to: SLRPWMEYTATL*FLNSQVLENSA
Trigger: GGCCGAGTTTTCCAAGACCTGGGAGTTCAAGAACCACAACGTGGCGGTGTACTCCATCCAGGGCCGGAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497343.5
ENST00000498165.6
CDS CAA 72 bp TGGTCTCTCCGGCCCTGGATGGAGTACACCGCCACGTaGTGGTTCTTGAACTCCCAGGTCTTGGAAAACTCG +
Preference number: 6 (lower is better)
Translates to: WSLRPWMEYTAT*WFLNSQVLENS
Trigger: CGAGTTTTCCAAGACCTGGGAGTTCAAGAACCACAACGTGGCGGTGTACTCCATCCAGGGCCGGAGAGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497343.5
ENST00000498165.6
CDS TCA 72 bp ACAGGACCCCGCGCGAGTCACCCACGTTGGCCACAGTaGGGTCTTTATCTGATAGCAGAGCAATCAAACACG +
Preference number: 6 (lower is better)
Translates to: TGPRASHPRWPQ*GLYLIAEQSNT
Trigger: CGTGTTTGATTGCTCTGCTATCAGATAAAGACCTCACTGTGGCCAACGTGGGTGACTCGCGCGGGGTCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000480117.1
ENST00000498165.6
CDS CAA 72 bp TCTTTGTCACACAGGACCCCGCGCGAGTCACCCACGTaGGCCACAGTGAGGTCTTTATCTGATAGCAGAGCA +
Preference number: 6 (lower is better)
Translates to: SLSHRTPRESPT*ATVRSLSDSRA
Trigger: TGCTCTGCTATCAGATAAAGACCTCACTGTGGCCAACGTGGGTGACTCGCGCGGGGTCCTGTGTGACAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000480117.1
ENST00000498165.6
CDS CAA 90 bp GCGTTCCCATCTTTGTCACACAGGACCCCGCGCGAGTCACCCACGTaGGCCACAGTGAGGTCTTTATCTGATAGCAGAGCAATCAAACAC +
Preference number: 6 (lower is better)
Translates to: AFPSLSHRTPRESPT*ATVRSLSDSRAIKH
Trigger: GTGTTTGATTGCTCTGCTATCAGATAAAGACCTCACTGTGGCCAACGTGGGTGACTCGCGCGGGGTCCTGTGTGACAAAGATGGGAACGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000480117.1
ENST00000498165.6
CDS TCA 72 bp CGTCGGTGTGGAAGAAGTAACTCCATAGAGCCAAGCTaGTGCACAGCAGGAAAAGCGTCTCGGGTCTCAGCA +
Preference number: 6 (lower is better)
Translates to: RRCGRSNSIEPS*CTAGKASRVSA
Trigger: TGCTGAGACCCGAGACGCTTTTCCTGCTGTGCATCAGCTTGGCTCTATGGAGTTACTTCTTCCACACCGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497343.5
ENST00000498165.6
CDS CCA 72 bp AGGCTGAAGCTTGTCCAGGTCAAAGGTCAGGATGTCTaGGTCTGGGATGACCACGTTGAGATTTTTCAGCGG +
Preference number: 6 (lower is better)
Translates to: RLKLVQVKGQDV*VWDDHVEIFQR
Trigger: CCGCTGAAAAATCTCAACGTGGTCATCCCAGACCCAGACATCCTGACCTTTGACCTGGACAAGCTTCAGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000480117.1
ENST00000498165.6
CDS CAA 72 bp GACATGGCCAGGATTCCCTGGACCCTCCAGGAGCCATaGAAACTGATGAAACCACCTGCTCTCTTTATCCTC +
Preference number: 6 (lower is better)
Translates to: DMARIPWTLQEP*KLMKPPALFIL
Trigger: GAGGATAAAGAGAGCAGGTGGTTTCATCAGTTTCAATGGCTCCTGGAGGGTCCAGGGAATCCTGGCCATGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000480117.1
ENST00000498165.6
CDS TCA 72 bp GGAAAAGCGTCTCGGGTCTCAGCAAGAAGTAGCGCATaGTGCGACCCAGCAGAGACAGCAAAGTCATTGTAT +
Preference number: 6 (lower is better)
Translates to: GKASRVSARSSA*CDPAETAKSLY
Trigger: ATACAATGACTTTGCTGTCTCTGCTGGGTCGCATCATGCGCTACTTCTTGCTGAGACCCGAGACGCTTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497343.5
ENST00000498165.6
CDS TCA 72 bp ACATGGCTGGGGAGGCCTCAGAATCATGGCAGGAGATaGAAGGCACTTCTTACATGTGTTGAAAAAGCAGGC +
Preference number: 6 (lower is better)
Translates to: TWLGRPQNHGRR*KALLTCVEKAG
Trigger: GCCTGCTTTTTCAACACATGTAAGAAGTGCCTTTCATCTCCTGCCATGATTCTGAGGCCTCCCCAGCCATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464260.5
CDS CAA 90 bp GGCCTCAGAATCATGGCAGGAGATGAAAGGCACTTCTTACATGTGTaGAAAAAGCAGGCATGTTCTGGTCTAGCCCTCTCTGCTAATGGC +
Preference number: 6 (lower is better)
Translates to: GLRIMAGDERHFLHV*KKQACSGLALSANG
Trigger: GCCATTAGCAGAGAGGGCTAGACCAGAACATGCCTGCTTTTTCAACACATGTAAGAAGTGCCTTTCATCTCCTGCCATGATTCTGAGGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464260.5
CDS GCA 72 bp GTGAGGTTCATCCAAGCGCTCCTTGATGAATCGAACTaGTTCTTCATTGCTGAAAGCATCCCAGAGACCATC +
Preference number: 6 (lower is better)
Translates to: VRFIQALLDESN*FFIAESIPETI
Trigger: GATGGTCTCTGGGATGCTTTCAGCAATGAAGAAGCAGTTCGATTCATCAAGGAGCGCTTGGATGAACCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000480117.1
ENST00000498165.6
CDS CCA 72 bp AAGCTTGTCCAGGTCAAAGGTCAGGATGTCTGGGTCTaGGATGACCACGTTGAGATTTTTCAGCGGATAATC +
Preference number: 6 (lower is better)
Translates to: KLVQVKGQDVWV*DDHVEIFQRII
Trigger: GATTATCCGCTGAAAAATCTCAACGTGGTCATCCCAGACCCAGACATCCTGACCTTTGACCTGGACAAGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000480117.1
ENST00000498165.6
CDS TCA 72 bp TGCTTCTTCATTGCTGAAAGCATCCCAGAGACCATCTaGTGCCAAGATCATGAACTCAGGCTGAAGCTTGTC +
Preference number: 6 (lower is better)
Translates to: CFFIAESIPETI*CQDHELRLKLV
Trigger: GACAAGCTTCAGCCTGAGTTCATGATCTTGGCATCAGATGGTCTCTGGGATGCTTTCAGCAATGAAGAAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000480117.1
ENST00000498165.6
CDS CCA 72 bp AAAAGAGGTTTAATTGGATTTCCAGTTCCACATGGCTaGGGAGGCCTCAGAATCATGGCAGGAGATGAAAGG +
Preference number: 6 (lower is better)
Translates to: KRGLIGFPVPHG*GGLRIMAGDER
Trigger: CCTTTCATCTCCTGCCATGATTCTGAGGCCTCCCCAGCCATGTGGAACTGGAAATCCAATTAAACCTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464260.5
CDS CCA 72 bp TTTCTCGTAGTCCTGAAGATGCTGTTTAAGGGCCTCTaGGAGTCGAGATTTTACATATTCAGCTGCAGTCTG +
Preference number: 6 (lower is better)
Translates to: FLVVLKMLFKGL*ESRFYIFSCSL
Trigger: CAGACTGCAGCTGAATATGTAAAATCTCGACTCCCAGAGGCCCTTAAACAGCATCTTCAGGACTACGAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464260.5
CDS CCA 72 bp TTTCTCGTAGTCCTGAAGATGCTGTTTAAGGGCCTCTaGGAGTCGAGATTTTACATATTCAGCTGCAGTCCT +
Preference number: 6 (lower is better)
Translates to: FLVVLKMLFKGL*ESRFYIFSCSP
Trigger: AGGACTGCAGCTGAATATGTAAAATCTCGACTCCCAGAGGCCCTTAAACAGCATCTTCAGGACTACGAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480117.1
CDS CCA 72 bp TTTCTCGTAGTCCTGAAGATGCTGTTTAAGGGCCTCTaGGAGTCGAGATTTTACATATTCAGCTGCAGTCTC +
Preference number: 6 (lower is better)
Translates to: FLVVLKMLFKGL*ESRFYIFSCSL
Trigger: GAGACTGCAGCTGAATATGTAAAATCTCGACTCCCAGAGGCCCTTAAACAGCATCTTCAGGACTACGAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497343.5
ENST00000498165.6
CDS CAA 72 bp ATCATGGCAGGAGATGAAAGGCACTTCTTACATGTGTaGAAAAAGCAGGCATGTTCTGGTCTAGCCCTCTCT +
Preference number: 6 (lower is better)
Translates to: IMAGDERHFLHV*KKQACSGLALS
Trigger: AGAGAGGGCTAGACCAGAACATGCCTGCTTTTTCAACACATGTAAGAAGTGCCTTTCATCTCCTGCCATGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464260.5
CDS CCA 72 bp TTTCTCGTAGTCCTGAAGATGCTGTTTAAGGGCCTCTaGGAGTCGAGATTTTACATATTCAGCTGCAGTTGT +
Preference number: 6 (lower is better)
Translates to: FLVVLKMLFKGL*ESRFYIFSCSC
Trigger: ACAACTGCAGCTGAATATGTAAAATCTCGACTCCCAGAGGCCCTTAAACAGCATCTTCAGGACTACGAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295839.9
CDS CAA 72 bp AGGATACAGTCAATTTTTCTAGCATTTCTCGGTCAATaGACAAAATCTGCTGTTCAAGGATGGTCTGGTAAG +
Preference number: 6 (lower is better)
Translates to: RIQSIFLAFLGQ*TKSAVQGWSGK
Trigger: CTTACCAGACCATCCTTGAACAGCAGATTTTGTCAATTGACCGAGAAATGCTAGAAAAATTGACTGTATCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000480117.1
ENST00000497343.5
ENST00000498165.6
CDS CAA 90 bp CTTCATCATAGGATACAGTCAATTTTTCTAGCATTTCTCGGTCAATaGACAAAATCTGCTGTTCAAGGATGGTCTGGTAAGATAATACAC +
Preference number: 6 (lower is better)
Translates to: LHHRIQSIFLAFLGQ*TKSAVQGWSGKIIH
Trigger: GTGTATTATCTTACCAGACCATCCTTGAACAGCAGATTTTGTCAATTGACCGAGAAATGCTAGAAAAATTGACTGTATCCTATGATGAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000480117.1
ENST00000497343.5
ENST00000498165.6
CDS CCA 72 bp TTTCTCGGTCAATTGACAAAATCTGCTGTTCAAGGATaGTCTGGTAAGATAATACACTATTTTCTTTGTCTT +
Preference number: 6 (lower is better)
Translates to: FLGQLTKSAVQG*SGKIIHYFLCL
Trigger: AAGACAAAGAAAATAGTGTATTATCTTACCAGACCATCCTTGAACAGCAGATTTTGTCAATTGACCGAGAAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000295839.9
ENST00000464260.5
ENST00000480117.1
ENST00000497343.5
ENST00000498165.6