RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PPEF2 (Homo sapiens)

Ensembl gene IDs: ENSG00000156194

Ensembl transcript IDs: ENST00000286719.12, ENST00000510607.1, ENST00000511880.7, ENST00000513324.1, ENST00000621010.1, ENST00000652700.1

Found 399 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGCTGCCGGCACCGCTCTAGCTCCAGTTCCACGGAGCTCCGCACCTaGCGGGAGAGCTCCCGCCCGTCCAGGGAACCGCTGCAGGGGATG +
Preference number: 1 (lower is better)
Translates to: CCRHRSSSSSTELRT*RESSRPSREPLQGM
Trigger: CATCCCCTGCAGCGGTTCCCTGGACGGGCGGGAGCTCTCCCGGCAGGTGCGGAGCTCCGTGGAACTGGAGCTAGAGCGGTGCCGGCAGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR GCA 90 bp CCTGCCGGGAGAGCTCCCGCCCGTCCAGGGAACCGCTGCAGGGGATaGTGGAGGACCTGCTGGTTTTCTGGGCCTTGTAGGAGCCAAGCC +
Preference number: 1 (lower is better)
Translates to: PAGRAPARPGNRCRG*WRTCWFSGPCRSQA
Trigger: GGCTTGGCTCCTACAAGGCCCAGAAAACCAGCAGGTCCTCCAGCATCCCCTGCAGCGGTTCCCTGGACGGGCGGGAGCTCTCCCGGCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR GCA 90 bp AGCTCCGCACCTGCCGGGAGAGCTCCCGCCCGTCCAGGGAACCGCTaGAGGGGATGCTGGAGGACCTGCTGGTTTTCTGGGCCTTGTAGG +
Preference number: 1 (lower is better)
Translates to: SSAPAGRAPARPGNR*RGCWRTCWFSGPCR
Trigger: CCTACAAGGCCCAGAAAACCAGCAGGTCCTCCAGCATCCCCTGCAGCGGTTCCCTGGACGGGCGGGAGCTCTCCCGGCAGGTGCGGAGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR GCA 90 bp CGGGAGGGCTCCTCTTTCTCTCCGGTCACCAGGAGGCCTGCTTGCTaGCGGCACCGCTCTAGCTCCAGTTCCACGGAGCTCCGCACCTGC +
Preference number: 1 (lower is better)
Translates to: REGSSFSPVTRRPAC*RHRSSSSSTELRTC
Trigger: GCAGGTGCGGAGCTCCGTGGAACTGGAGCTAGAGCGGTGCCGGCAGCAAGCAGGCCTCCTGGTGACCGGAGAGAAAGAGGAGCCCTCCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR GCA 90 bp GAGCGGGAGGGCTCCTCTTTCTCTCCGGTCACCAGGAGGCCTGCTTaGTGCCGGCACCGCTCTAGCTCCAGTTCCACGGAGCTCCGCACC +
Preference number: 1 (lower is better)
Translates to: EREGSSFSPVTRRPA*CRHRSSSSSTELRT
Trigger: GGTGCGGAGCTCCGTGGAACTGGAGCTAGAGCGGTGCCGGCAGCAAGCAGGCCTCCTGGTGACCGGAGAGAAAGAGGAGCCCTCCCGCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR CCA 90 bp GCCGGGAGAGCTCCCGCCCGTCCAGGGAACCGCTGCAGGGGATGCTaGAGGACCTGCTGGTTTTCTGGGCCTTGTAGGAGCCAAGCCGAA +
Preference number: 1 (lower is better)
Translates to: AGRAPARPGNRCRGC*RTCWFSGPCRSQAE
Trigger: TTCGGCTTGGCTCCTACAAGGCCCAGAAAACCAGCAGGTCCTCCAGCATCCCCTGCAGCGGTTCCCTGGACGGGCGGGAGCTCTCCCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR GCA 90 bp CTGTTCACCAGCTGTGGCCTCAGCATCCGCCATGGCAGTCCTAGGTaGAACACAGACTCCACCGCTGCTGCCCAGTCACTCAAGGTGATT +
Preference number: 1 (lower is better)
Translates to: LFTSCGLSIRHGSPR*NTDSTAAAQSLKVI
Trigger: AATCACCTTGAGTGACTGGGCAGCAGCGGTGGAGTCTGTGTTGCACCTAGGACTGCCATGGCGGATGCTGAGGCCACAGCTGGTGAACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR TCA 90 bp ACTGCTGCAGCCACTGTCTTTAGCATTTGTAGCTTGTGGGCATTCTaGGGCATCGCCCTCTGGGCAGGATTTCTCCACAAGGCGGAAGGC +
Preference number: 1 (lower is better)
Translates to: TAAATVFSICSLWAF*GIALWAGFLHKAEG
Trigger: GCCTTCCGCCTTGTGGAGAAATCCTGCCCAGAGGGCGATGCCTCAGAATGCCCACAAGCTACAAATGCTAAAGACAGTGGCTGCAGCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR CCA 90 bp CGGGGAGAAACCATGGGATGGGTCCCTGTGCAGAGCTCTTCTGGTTaGCTCTTCTCTTCTCCTCCATCTGCTTCTCACTCTTCTGTCTCG +
Preference number: 1 (lower is better)
Translates to: RGETMGWVPVQSSSG*LFSSPPSASHSSVS
Trigger: CGAGACAGAAGAGTGAGAAGCAGATGGAGGAGAAGAGAAGAGCCAACCAGAAGAGCTCTGCACAGGGACCCATCCCATGGTTTCTCCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR TCA 90 bp CTAGGTGCAACACAGACTCCACCGCTGCTGCCCAGTCACTCAAGGTaGTTAAACCTACAGGTGAGAGCTAACCTGTTGCCTTGTCACCTA +
Preference number: 1 (lower is better)
Translates to: LGATQTPPLLPSHSR*LNLQVRANLLPCHL
Trigger: TAGGTGACAAGGCAACAGGTTAGCTCTCACCTGTAGGTTTAATCACCTTGAGTGACTGGGCAGCAGCGGTGGAGTCTGTGTTGCACCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR CCA 90 bp GAGGCACTTTGGGTGATGAAGACCAGGCTGTTCTTAGTGTGCACCTaGACTGCTGCAGCCACTGTCTTTAGCATTTGTAGCTTGTGGGCA +
Preference number: 1 (lower is better)
Translates to: EALWVMKTRLFLVCT*TAAATVFSICSLWA
Trigger: TGCCCACAAGCTACAAATGCTAAAGACAGTGGCTGCAGCAGTCCAGGTGCACACTAAGAACAGCCTGGTCTTCATCACCCAAAGTGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR GCA 90 bp CCCTGTGCAGAGCTCTTCTGGTTGGCTCTTCTCTTCTCCTCCATCTaGTTCTCACTCTTCTGTCTCGTTTTGCACCTCATGGTGGAAACT +
Preference number: 1 (lower is better)
Translates to: PCAELFWLALLFSSI*FSLFCLVLHLMVET
Trigger: AGTTTCCACCATGAGGTGCAAAACGAGACAGAAGAGTGAGAAGCAGATGGAGGAGAAGAGAAGAGCCAACCAGAAGAGCTCTGCACAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR GCA 90 bp GCCTATGAGGCACTTTGGGTGATGAAGACCAGGCTGTTCTTAGTGTaGACCTGGACTGCTGCAGCCACTGTCTTTAGCATTTGTAGCTTG +
Preference number: 1 (lower is better)
Translates to: AYEALWVMKTRLFLV*TWTAAATVFSICSL
Trigger: CAAGCTACAAATGCTAAAGACAGTGGCTGCAGCAGTCCAGGTGCACACTAAGAACAGCCTGGTCTTCATCACCCAAAGTGCCTCATAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR TCA 90 bp CGAGCAAGGTCACAGATGCAGTCATCTGTAATGTCGATATTCATGTaGGAGCTGAACAGCTTCCAGGTCTGCCTGAACTCGTCCAGTGAG +
Preference number: 1 (lower is better)
Translates to: RARSQMQSSVMSIFM*ELNSFQVCLNSSSE
Trigger: CTCACTGGACGAGTTCAGGCAGACCTGGAAGCTGTTCAGCTCTCACATGAATATCGACATTACAGATGACTGCATCTGTGACCTTGCTCG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR CCA 90 bp CTGACACCCCACCATGAAGAATTAGAACTTTCTCATCTATCAGAGTaGCCAGTGGAAGCCAACAGAAAACATCTTGCAGGGTTCTTAGTA +
Preference number: 1 (lower is better)
Translates to: LTPHHEELELSHLSE*PVEANRKHLAGFLV
Trigger: TACTAAGAACCCTGCAAGATGTTTTCTGTTGGCTTCCACTGGCCACTCTGATAGATGAGAAAGTTCTAATTCTTCATGGTGGGGTGTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR GCA 90 bp TTCTCATCTATCAGAGTGGCCAGTGGAAGCCAACAGAAAACATCTTaGAGGGTTCTTAGTATTTCCTTCCCGTGTACCTTGTATTTATTC +
Preference number: 1 (lower is better)
Translates to: FSSIRVASGSQQKTS*RVLSISFPCTLYLF
Trigger: GAATAAATACAAGGTACACGGGAAGGAAATACTAAGAACCCTGCAAGATGTTTTCTGTTGGCTTCCACTGGCCACTCTGATAGATGAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR TCA 90 bp CCTAGAAGTCTAGTTTCCTGCCCAATGGTGTGTATATTTTTATCCTaGCATCCTTCTTACTATCTGCAGGTAATAGAAATAATGGGCACT +
Preference number: 1 (lower is better)
Translates to: PRSLVSCPMVCIFLS*HPSYYLQVIEIMGT
Trigger: AGTGCCCATTATTTCTATTACCTGCAGATAGTAAGAAGGATGTCAGGATAAAAATATACACACCATTGGGCAGGAAACTAGACTTCTAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR-3UTR GCA 90 bp TCCGCAGCTCTCCGGCTTCAGAGTCTGCTTCTGAGGCTGAGCGGGAGGGCTCCTACCAGGAGGCCTGCTTaGTGCCGGCACCGCTCTAGC +
Preference number: 2 (lower is better)
Translates to: SAALRLQSLLLRLSGRAPTRRPA*CRHRSS
Trigger: GCTAGAGCGGTGCCGGCAGCAAGCAGGCCTCCTGGT...AGGAGCCCTCCCGCTCAGCCTCAGAAGCAGACTCTGAAGCCGGAGAGCTGCGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR-3UTR TCA 90 bp GGCTTCCGCAGCTCTCCGGCTTCAGAGTCTGCTTCTGAGGCTGAGCGGGAGGGCGCTGAGCATTGCCTATaGGGCACTTTGGGTGATGAA +
Preference number: 2 (lower is better)
Translates to: GFRSSPASESASEAEREGAEHCL*GTLGDE
Trigger: TTCATCACCCAAAGTGCCTCATAGGCAATGCTCAGC...GCCCTCCCGCTCAGCCTCAGAAGCAGACTCTGAAGCCGGAGAGCTGCGGAAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR-3UTR TCA 90 bp AGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGCCGAGAAGGTTGAGACCCGGTTaGTGTTTGGCAGCTGTACCA +
Preference number: 2 (lower is better)
Translates to: RRLRQENRLGGGLCGEPRRLRPG*CLAAVP
Trigger: TGGTACAGCTGCCAAACATCAACCGGGTCTCAACCT...TCTCGGCTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR-3UTR TCA 90 bp GGCTTCCGCAGCTCTCCGGCTTCAGAGTCTGCTTCTGAGGCTGAGCGGGAGGGCCTCACTGTAACAGGTTaGGACCCGGTTGATGTTTGG +
Preference number: 2 (lower is better)
Translates to: GFRSSPASESASEAEREGLTVTG*DPVDVW
Trigger: CCAAACATCAACCGGGTCTCAACCTGTTACAGTGAG...GCCCTCCCGCTCAGCCTCAGAAGCAGACTCTGAAGCCGGAGAGCTGCGGAAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR-3UTR TCA 90 bp CTACTCAGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGACCGTTGAACACATATaGCCGTTCTGGCGACGGGAG +
Preference number: 2 (lower is better)
Translates to: LLRRLRQENRLGGGLCGETVEHI*PFWRRE
Trigger: CTCCCGTCGCCAGAACGGTCATATGTGTTCAACGGT...CTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCTGAGTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR-3UTR GCA 90 bp TTAGTGTGCACCTGGACTGCTGCAGCCACTGTCTTTAGCATTTGTAGCTTGTGGACGGAGCTCCGCACCTaGCGGGAGAGCTCCCGCCCG +
Preference number: 2 (lower is better)
Translates to: LVCTWTAAATVFSICSLWTELRT*RESSRP
Trigger: CGGGCGGGAGCTCTCCCGGCAGGTGCGGAGCTCCGT...CCACAAGCTACAAATGCTAAAGACAGTGGCTGCAGCAGTCCAGGTGCACACTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR-3UTR CCA 90 bp AGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGCCGAGAGCCTATGAGGCACTTTaGGTGATGAAGACCAGGCTG +
Preference number: 2 (lower is better)
Translates to: RRLRQENRLGGGLCGEPRAYEAL*VMKTRL
Trigger: CAGCCTGGTCTTCATCACCCAAAGTGCCTCATAGGC...TCTCGGCTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286719.12
ENST00000511880.7
ENST00000652700.1
3UTR-3UTR TCA 90 bp AGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGCCGAGAGCTGAGCATTGCCTATaGGGCACTTTGGGTGATGAA +
Preference number: 2 (lower is better)
Translates to: RRLRQENRLGGGLCGEPRAEHCL*GTLGDE
Trigger: TTCATCACCCAAAGTGCCTCATAGGCAATGCTCAGC...TCTCGGCTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286719.12
ENST00000511880.7
ENST00000652700.1
3UTR-3UTR TCA 90 bp TCCGCAGCTCTCCGGCTTCAGAGTCTGCTTCTGAGGCTGAGCGGGAGGGCTCCTAGTCTAGTGAGAAGCTaGGCATTGCCTATGAGGCAC +
Preference number: 2 (lower is better)
Translates to: SAALRLQSLLLRLSGRAPSLVRS*ALPMRH
Trigger: GTGCCTCATAGGCAATGCTCAGCTTCTCACTAGACT...AGGAGCCCTCCCGCTCAGCCTCAGAAGCAGACTCTGAAGCCGGAGAGCTGCGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR-3UTR TCA 90 bp AGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGCCGAGAAGTCTAGTGAGAAGCTaGGCATTGCCTATGAGGCAC +
Preference number: 2 (lower is better)
Translates to: RRLRQENRLGGGLCGEPRSLVRS*ALPMRH
Trigger: GTGCCTCATAGGCAATGCTCAGCTTCTCACTAGACT...TCTCGGCTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286719.12
ENST00000511880.7
ENST00000652700.1
3UTR-3UTR TCA 90 bp CTACTCAGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGCCCACCCCTCCACACTaGAATACACAGGTGATTCTG +
Preference number: 2 (lower is better)
Translates to: LLRRLRQENRLGGGLCGEPTPPH*NTQVIL
Trigger: CAGAATCACCTGTGTATTTCAGTGTGGAGGGGTGGG...CTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCTGAGTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286719.12
ENST00000511880.7
ENST00000652700.1
3UTR-3UTR TCA 90 bp CATTCTGAGGCATCGCCCTCTGGGCAGGATTTCTCCACAAGGCGGAAGGCCTCCCAGCATGTTGTCTGCTaGGCTGTTCACCAGCTGTGG +
Preference number: 2 (lower is better)
Translates to: HSEASPSGQDFSTRRKASQHVVC*AVHQLW
Trigger: CCACAGCTGGTGAACAGCTCAGCAGACAACATGCTG...GGAGGCCTTCCGCCTTGTGGAGAAATCCTGCCCAGAGGGCGATGCCTCAGAATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR-3UTR CCA 90 bp CATTCTGAGGCATCGCCCTCTGGGCAGGATTTCTCCACAAGGCGGAAGGCCTCCGGAGAAACCATGGGATaGGTCCCTGTGCAGAGCTCT +
Preference number: 2 (lower is better)
Translates to: HSEASPSGQDFSTRRKASGETMG*VPVQSS
Trigger: AGAGCTCTGCACAGGGACCCATCCCATGGTTTCTCC...GGAGGCCTTCCGCCTTGTGGAGAAATCCTGCCCAGAGGGCGATGCCTCAGAATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR-3UTR TCA 90 bp CTACTCAGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGGCTGAGCATTGCCTATaGGGCACTTTGGGTGATGAA +
Preference number: 2 (lower is better)
Translates to: LLRRLRQENRLGGGLCGEAEHCL*GTLGDE
Trigger: TTCATCACCCAAAGTGCCTCATAGGCAATGCTCAGC...CTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCTGAGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286719.12
ENST00000511880.7
ENST00000652700.1
3UTR-3UTR TCA 90 bp CCTGCTGGTTTTCTGGGCCTTGTAGGAGCCAAGCCGAAGGGGCGAAGAGGGAAGCCCACCCCTCCACACTaGAATACACAGGTGATTCTG +
Preference number: 2 (lower is better)
Translates to: PAGFLGLVGAKPKGRRGKPTPPH*NTQVIL
Trigger: CAGAATCACCTGTGTATTTCAGTGTGGAGGGGTGGG...CTTCCCTCTTCGCCCCTTCGGCTTGGCTCCTACAAGGCCCAGAAAACCAGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR-3UTR GCA 90 bp CATTCTGAGGCATCGCCCTCTGGGCAGGATTTCTCCACAAGGCGGAAGGCCTCCAACAGCTTCCAGGTCTaGCTGAACTCGTCCAGTGAG +
Preference number: 2 (lower is better)
Translates to: HSEASPSGQDFSTRRKASNSFQV*LNSSSE
Trigger: CTCACTGGACGAGTTCAGGCAGACCTGGAAGCTGTT...GGAGGCCTTCCGCCTTGTGGAGAAATCCTGCCCAGAGGGCGATGCCTCAGAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR-3UTR CCA 90 bp AGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGCCGAGAGTGAAGATTGTGAGGTaGGGTTGGGGCACTCATATA +
Preference number: 2 (lower is better)
Translates to: RRLRQENRLGGGLCGEPRVKIVR*GWGTHI
Trigger: TATATGAGTGCCCCAACCCCACCTCACAATCTTCAC...TCTCGGCTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286719.12
ENST00000511880.7
ENST00000652700.1
3UTR-3UTR GCA 90 bp TTAGTGTGCACCTGGACTGCTGCAGCCACTGTCTTTAGCATTTGTAGCTTGTGGAGGAGGCCTGCTTGCTaGCGGCACCGCTCTAGCTCC +
Preference number: 2 (lower is better)
Translates to: LVCTWTAAATVFSICSLWRRPAC*RHRSSS
Trigger: GGAGCTAGAGCGGTGCCGGCAGCAAGCAGGCCTCCT...CCACAAGCTACAAATGCTAAAGACAGTGGCTGCAGCAGTCCAGGTGCACACTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR-3UTR CCA 90 bp CATTCTGAGGCATCGCCCTCTGGGCAGGATTTCTCCACAAGGCGGAAGGCCTCCAGCCCTCTTGAGCCATaGGATCACTCCACAGGATAT +
Preference number: 2 (lower is better)
Translates to: HSEASPSGQDFSTRRKASSPLEP*DHSTGY
Trigger: ATATCCTGTGGAGTGATCCCATGGCTCAAGAGGGCT...GGAGGCCTTCCGCCTTGTGGAGAAATCCTGCCCAGAGGGCGATGCCTCAGAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR-3UTR GCA 90 bp ACAGCCTCCTCCTCGAATAGTGTTGGCCTTGCAGCCCTCTTGAGCCATGGGATCCTCCGACTCTCAGAGTaGTGGGATTACAGGTGTGAG +
Preference number: 2 (lower is better)
Translates to: TASSSNSVGLAALLSHGILRLSE*WDYRCE
Trigger: CTCACACCTGTAATCCCAGCACTCTGAGAGTCGGAG...GATCCCATGGCTCAAGAGGGCTGCAAGGCCAACACTATTCGAGGAGGAGGCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR-3UTR CCA 90 bp AGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGCCGAGAATTGTGAGGTGGGGTTaGGGCACTCATATACTTAAA +
Preference number: 2 (lower is better)
Translates to: RRLRQENRLGGGLCGEPRIVRWG*GTHILK
Trigger: TTTAAGTATATGAGTGCCCCAACCCCACCTCACAAT...TCTCGGCTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286719.12
ENST00000511880.7
ENST00000652700.1
3UTR-3UTR CCA 90 bp TCCGCAGCTCTCCGGCTTCAGAGTCTGCTTCTGAGGCTGAGCGGGAGGGCTCCTATTGTGAGGTGGGGTTaGGGCACTCATATACTTAAA +
Preference number: 2 (lower is better)
Translates to: SAALRLQSLLLRLSGRAPIVRWG*GTHILK
Trigger: TTTAAGTATATGAGTGCCCCAACCCCACCTCACAAT...AGGAGCCCTCCCGCTCAGCCTCAGAAGCAGACTCTGAAGCCGGAGAGCTGCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR CAA 90 bp TCGGGGAGAAACCATGGGATGGGTCCCTGTGCAGAGCTCTTCTGGTaGGCTCTTCTCTTCTCCTCCATCTGCTTCTCACTCTTCTGTCTC +
Preference number: 2 (lower is better)
Translates to: SGRNHGMGPCAELFW*ALLFSSICFSLFCL
Trigger: GAGACAGAAGAGTGAGAAGCAGATGGAGGAGAAGAGAAGAGCCAACCAGAAGAGCTCTGCACAGGGACCCATCCCATGGTTTCTCCCCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR-3UTR TCA 90 bp TTAGTGTGCACCTGGACTGCTGCAGCCACTGTCTTTAGCATTTGTAGCTTGTGGAGCTACTCAGGAGGCTaGGGCAGGAGAATCGCCTGG +
Preference number: 2 (lower is better)
Translates to: LVCTWTAAATVFSICSLWSYSGG*GRRIAW
Trigger: CCAGGCGATTCTCCTGCCTCAGCCTCCTGAGTAGCT...CCACAAGCTACAAATGCTAAAGACAGTGGCTGCAGCAGTCCAGGTGCACACTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR-3UTR TCA 90 bp CCTGCTGGTTTTCTGGGCCTTGTAGGAGCCAAGCCGAAGGGGCGAAGAGGGAAGCAGATCAGTTATGTCTaGCACCCCACCATGAAGAAT +
Preference number: 2 (lower is better)
Translates to: PAGFLGLVGAKPKGRRGKQISYV*HPTMKN
Trigger: ATTCTTCATGGTGGGGTGTCAGACATAACTGATCTG...CTTCCCTCTTCGCCCCTTCGGCTTGGCTCCTACAAGGCCCAGAAAACCAGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR-3UTR TCA 90 bp CATTCTGAGGCATCGCCCTCTGGGCAGGATTTCTCCACAAGGCGGAAGGCCTCCTGTGGCCATCTTTGTTaGAATCAATGCTCCGAGCAA +
Preference number: 2 (lower is better)
Translates to: HSEASPSGQDFSTRRKASCGHLC*NQCSEQ
Trigger: TTGCTCGGAGCATTGATTTCAACAAAGATGGCCACA...GGAGGCCTTCCGCCTTGTGGAGAAATCCTGCCCAGAGGGCGATGCCTCAGAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR CAA 90 bp TGTTCCTTGGCCAAGTTCTTCAGCCAAGACTTGTACTCCAGCATGTaGTCTGCTGAGCTGTTCACCAGCTGTGGCCTCAGCATCCGCCAT +
Preference number: 2 (lower is better)
Translates to: CSLAKFFSQDLYSSM*SAELFTSCGLSIRH
Trigger: ATGGCGGATGCTGAGGCCACAGCTGGTGAACAGCTCAGCAGACAACATGCTGGAGTACAAGTCTTGGCTGAAGAACTTGGCCAAGGAACA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR-3UTR TCA 90 bp TTAGTGTGCACCTGGACTGCTGCAGCCACTGTCTTTAGCATTTGTAGCTTGTGGGGAGGGTGGATCACCTaGGGTTGGGAGTTCAAGACC +
Preference number: 2 (lower is better)
Translates to: LVCTWTAAATVFSICSLWGGWIT*GWEFKT
Trigger: GGTCTTGAACTCCCAACCTCAGGTGATCCACCCTCC...CCACAAGCTACAAATGCTAAAGACAGTGGCTGCAGCAGTCCAGGTGCACACTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR-3UTR TCA 90 bp CATTCTGAGGCATCGCCCTCTGGGCAGGATTTCTCCACAAGGCGGAAGGCCTCCTCTGACACCCCACCATaGAGAATTAGAACTTTCTCA +
Preference number: 2 (lower is better)
Translates to: HSEASPSGQDFSTRRKASSDTPP*RIRTFS
Trigger: TGAGAAAGTTCTAATTCTTCATGGTGGGGTGTCAGA...GGAGGCCTTCCGCCTTGTGGAGAAATCCTGCCCAGAGGGCGATGCCTCAGAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR-3UTR GCA 90 bp CATTCTGAGGCATCGCCCTCTGGGCAGGATTTCTCCACAAGGCGGAAGGCCTCCTCTTCTGTCTCGTTTTaGACCTCATGGTGGAAACTA +
Preference number: 2 (lower is better)
Translates to: HSEASPSGQDFSTRRKASSSVSF*TSWWKL
Trigger: TAGTTTCCACCATGAGGTGCAAAACGAGACAGAAGA...GGAGGCCTTCCGCCTTGTGGAGAAATCCTGCCCAGAGGGCGATGCCTCAGAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR-3UTR GCA 90 bp ATCTGTAATGTCGATATTCATGTGAGAGCTGAACAGCTTCCAGGTCTGCCTGAACGTCCAGGGAACCGCTaGAGGGGATGCTGGAGGACC +
Preference number: 2 (lower is better)
Translates to: ICNVDIHVRAEQLPGLPERPGNR*RGCWRT
Trigger: GGTCCTCCAGCATCCCCTGCAGCGGTTCCCTGGACG...TTCAGGCAGACCTGGAAGCTGTTCAGCTCTCACATGAATATCGACATTACAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR-3UTR CCA 90 bp CTACTCAGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGGAGTTACATTGTCAGTaGTTCTTAACTGAAGTGGAC +
Preference number: 2 (lower is better)
Translates to: LLRRLRQENRLGGGLCGEELHCQ*FLTEVD
Trigger: GTCCACTTCAGTTAAGAACCACTGACAATGTAACTC...CTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCTGAGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286719.12
ENST00000511880.7
ENST00000652700.1
3UTR-3UTR CCA 90 bp CATTCTGAGGCATCGCCCTCTGGGCAGGATTTCTCCACAAGGCGGAAGGCCTCCTTTTGCACCTCATGGTaGAAACTATCTCATGATCCG +
Preference number: 2 (lower is better)
Translates to: HSEASPSGQDFSTRRKASFCTSW*KLSHDP
Trigger: CGGATCATGAGATAGTTTCCACCATGAGGTGCAAAA...GGAGGCCTTCCGCCTTGTGGAGAAATCCTGCCCAGAGGGCGATGCCTCAGAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR-3UTR CCA 90 bp TTAGTGTGCACCTGGACTGCTGCAGCCACTGTCTTTAGCATTTGTAGCTTGTGGCGCTGCAGGGGATGCTaGAGGACCTGCTGGTTTTCT +
Preference number: 2 (lower is better)
Translates to: LVCTWTAAATVFSICSLWRCRGC*RTCWFS
Trigger: AGAAAACCAGCAGGTCCTCCAGCATCCCCTGCAGCG...CCACAAGCTACAAATGCTAAAGACAGTGGCTGCAGCAGTCCAGGTGCACACTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR CAA 90 bp TTCTCGCGACTCAGTTGTTCCTTGGCCAAGTTCTTCAGCCAAGACTaGTACTCCAGCATGTTGTCTGCTGAGCTGTTCACCAGCTGTGGC +
Preference number: 2 (lower is better)
Translates to: FSRLSCSLAKFFSQD*YSSMLSAELFTSCG
Trigger: GCCACAGCTGGTGAACAGCTCAGCAGACAACATGCTGGAGTACAAGTCTTGGCTGAAGAACTTGGCCAAGGAACAACTGAGTCGCGAGAA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR-3UTR CCA 90 bp CCTGCTGGTTTTCTGGGCCTTGTAGGAGCCAAGCCGAAGGGGCGAAGAGGGAAGTCGTTTTGCACCTCATaGTGGAAACTATCTCATGAT +
Preference number: 2 (lower is better)
Translates to: PAGFLGLVGAKPKGRRGKSFCTS*WKLSHD
Trigger: ATCATGAGATAGTTTCCACCATGAGGTGCAAAACGA...CTTCCCTCTTCGCCCCTTCGGCTTGGCTCCTACAAGGCCCAGAAAACCAGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR CAA 90 bp AAAATAACAGCCTCCTCCTCGAATAGTGTTGGCCTTGCAGCCCTCTaGAGCCATGGGATCACTCCACAGGATATCTACAACCTGCCTCCA +
Preference number: 2 (lower is better)
Translates to: KITASSSNSVGLAAL*SHGITPQDIYNLPP
Trigger: TGGAGGCAGGTTGTAGATATCCTGTGGAGTGATCCCATGGCTCAAGAGGGCTGCAAGGCCAACACTATTCGAGGAGGAGGCTGTTATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR-3UTR TCA 90 bp TGGATCGGTTTCGATACAATGTTTCCAGCAAACTTGATTGTATGTTCTCGCGACGCCTTGCAGCCCTCTTaGGCCATGGGATCACTCCAC +
Preference number: 2 (lower is better)
Translates to: WIGFDTMFPANLIVCSRDALQPS*AMGSLH
Trigger: GTGGAGTGATCCCATGGCTCAAGAGGGCTGCAAGGC...GTCGCGAGAACATACAATCAAGTTTGCTGGAAACATTGTATCGAAACCGATCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR-3UTR TCA 90 bp TTAGTGTGCACCTGGACTGCTGCAGCCACTGTCTTTAGCATTTGTAGCTTGTGGTATTCATGTGAGAGCTaGACAGCTTCCAGGTCTGCC +
Preference number: 2 (lower is better)
Translates to: LVCTWTAAATVFSICSLWYSCES*TASRSA
Trigger: GGCAGACCTGGAAGCTGTTCAGCTCTCACATGAATA...CCACAAGCTACAAATGCTAAAGACAGTGGCTGCAGCAGTCCAGGTGCACACTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR-3UTR GCA 90 bp ATCTGTAATGTCGATATTCATGTGAGAGCTGAACAGCTTCCAGGTCTGCCTGAAAACCGCTGCAGGGGATaGTGGAGGACCTGCTGGTTT +
Preference number: 2 (lower is better)
Translates to: ICNVDIHVRAEQLPGLPENRCRG*WRTCWF
Trigger: AAACCAGCAGGTCCTCCAGCATCCCCTGCAGCGGTT...TTCAGGCAGACCTGGAAGCTGTTCAGCTCTCACATGAATATCGACATTACAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR-3UTR TCA 90 bp AAAATAACAGCCTCCTCCTCGAATAGTGTTGGCCTTGCAGCCCTCTTGAGCCATCCACAAAGTCACCGTTaGACACATATGACCGTTCTG +
Preference number: 2 (lower is better)
Translates to: KITASSSNSVGLAALLSHPQSHR*THMTVL
Trigger: CAGAACGGTCATATGTGTTCAACGGTGACTTTGTGG...ATGGCTCAAGAGGGCTGCAAGGCCAACACTATTCGAGGAGGAGGCTGTTATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR-3UTR GCA 90 bp TTTCCTTGCTCCTCTCTATTTTGTCCAAAAGCTCCAGATCAGTTATGTCTGACACCGAGATCGCGCCAATaGACTCCAGCCTGGGCAACA +
Preference number: 2 (lower is better)
Translates to: FPCSSLFCPKAPDQLCLTPRSRQ*TPAWAT
Trigger: TGTTGCCCAGGCTGGAGTGCATTGGCGCGATCTCGG...TGTCAGACATAACTGATCTGGAGCTTTTGGACAAAATAGAGAGGAGCAAGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR-3UTR CCA 90 bp TTAGTGTGCACCTGGACTGCTGCAGCCACTGTCTTTAGCATTTGTAGCTTGTGGGACCCGGTTGATGTTTaGCAGCTGTACCAGATGTTT +
Preference number: 2 (lower is better)
Translates to: LVCTWTAAATVFSICSLWDPVDV*QLYQMF
Trigger: AAACATCTGGTACAGCTGCCAAACATCAACCGGGTC...CCACAAGCTACAAATGCTAAAGACAGTGGCTGCAGCAGTCCAGGTGCACACTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR CAA 90 bp AGGCGGAAGGCCTCCAGGAACTCATTGATATCAATGTGGCCATCTTaGTTGAAATCAATGCTCCGAGCAAGGTCACAGATGCAGTCATCT +
Preference number: 2 (lower is better)
Translates to: RRKASRNSLISMWPS*LKSMLRARSQMQSS
Trigger: AGATGACTGCATCTGTGACCTTGCTCGGAGCATTGATTTCAACAAAGATGGCCACATTGATATCAATGAGTTCCTGGAGGCCTTCCGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR CAA 90 bp CGGAAGGCCTCCAGGAACTCATTGATATCAATGTGGCCATCTTTGTaGAAATCAATGCTCCGAGCAAGGTCACAGATGCAGTCATCTGTA +
Preference number: 2 (lower is better)
Translates to: RKASRNSLISMWPSL*KSMLRARSQMQSSV
Trigger: TACAGATGACTGCATCTGTGACCTTGCTCGGAGCATTGATTTCAACAAAGATGGCCACATTGATATCAATGAGTTCCTGGAGGCCTTCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR-3UTR TCA 90 bp ATCTGTAATGTCGATATTCATGTGAGAGCTGAACAGCTTCCAGGTCTGCCTGAAAGTCTCCACACACTGTaGTCTCCTCACTGTAACAGG +
Preference number: 2 (lower is better)
Translates to: ICNVDIHVRAEQLPGLPESLHTL*SPHCNR
Trigger: CCTGTTACAGTGAGGAGATCACAGTGTGTGGAGACT...TTCAGGCAGACCTGGAAGCTGTTCAGCTCTCACATGAATATCGACATTACAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR-3UTR GCA 90 bp TTAGTGTGCACCTGGACTGCTGCAGCCACTGTCTTTAGCATTTGTAGCTTGTGGGTAGCAGCATTTCCTTaGTCCTCTCTATTTTGTCCA +
Preference number: 2 (lower is better)
Translates to: LVCTWTAAATVFSICSLWVAAFP*SSLFCP
Trigger: TGGACAAAATAGAGAGGAGCAAGGAAATGCTGCTAC...CCACAAGCTACAAATGCTAAAGACAGTGGCTGCAGCAGTCCAGGTGCACACTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR-3UTR CCA 90 bp TGGATCGGTTTCGATACAATGTTTCCAGCAAACTTGATTGTATGTTCTCGCGACGCCTATGAGGCACTTTaGGTGATGAAGACCAGGCTG +
Preference number: 2 (lower is better)
Translates to: WIGFDTMFPANLIVCSRDAYEAL*VMKTRL
Trigger: CAGCCTGGTCTTCATCACCCAAAGTGCCTCATAGGC...GTCGCGAGAACATACAATCAAGTTTGCTGGAAACATTGTATCGAAACCGATCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR-3UTR TCA 90 bp TTAGTGTGCACCTGGACTGCTGCAGCCACTGTCTTTAGCATTTGTAGCTTGTGGTTCACTGAGAAGATCTaGAGAATGAGCAAACAGCTT +
Preference number: 2 (lower is better)
Translates to: LVCTWTAAATVFSICSLWFTEKI*RMSKQL
Trigger: AAGCTGTTTGCTCATTCTTCAGATCTTCTCAGTGAA...CCACAAGCTACAAATGCTAAAGACAGTGGCTGCAGCAGTCCAGGTGCACACTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR-3UTR CCA 90 bp ATCTGTAATGTCGATATTCATGTGAGAGCTGAACAGCTTCCAGGTCTGCCTGAAGTGAAGATTGTGAGGTaGGGTTGGGGCACTCATATA +
Preference number: 2 (lower is better)
Translates to: ICNVDIHVRAEQLPGLPEVKIVR*GWGTHI
Trigger: TATATGAGTGCCCCAACCCCACCTCACAATCTTCAC...TTCAGGCAGACCTGGAAGCTGTTCAGCTCTCACATGAATATCGACATTACAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR-3UTR CCA 90 bp TGGATCGGTTTCGATACAATGTTTCCAGCAAACTTGATTGTATGTTCTCGCGACTGTGCAGAGCTCTTCTaGTTGGCTCTTCTCTTCTCC +
Preference number: 2 (lower is better)
Translates to: WIGFDTMFPANLIVCSRDCAELF*LALLFS
Trigger: GGAGAAGAGAAGAGCCAACCAGAAGAGCTCTGCACA...GTCGCGAGAACATACAATCAAGTTTGCTGGAAACATTGTATCGAAACCGATCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR-3UTR CCA 90 bp TCTAGGTTGGATCGGTTTCGATACAATGTTTCCAGCAAACTTGATTGTATGTTCTTCGGGGAGAAACCATaGGATGGGTCCCTGTGCAGA +
Preference number: 2 (lower is better)
Translates to: SRLDRFRYNVSSKLDCMFFGEKP*DGSLCR
Trigger: TCTGCACAGGGACCCATCCCATGGTTTCTCCCCGAA...GAACATACAATCAAGTTTGCTGGAAACATTGTATCGAAACCGATCCAACCTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR-3UTR GCA 90 bp TGGATCGGTTTCGATACAATGTTTCCAGCAAACTTGATTGTATGTTCTCGCGACACTCTGCTAATCCTTTaGCTCATGGTGAGTGTGTGG +
Preference number: 2 (lower is better)
Translates to: WIGFDTMFPANLIVCSRDTLLIL*LMVSVW
Trigger: CCACACACTCACCATGAGGCAAAGGATTAGCAGAGT...GTCGCGAGAACATACAATCAAGTTTGCTGGAAACATTGTATCGAAACCGATCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR-3UTR TCA 90 bp ATCTGTAATGTCGATATTCATGTGAGAGCTGAACAGCTTCCAGGTCTGCCTGAATCATCACTTCCTTGGTaGAGCCATATCGTAAGTTCA +
Preference number: 2 (lower is better)
Translates to: ICNVDIHVRAEQLPGLPESSLPW*SHIVSS
Trigger: TGAACTTACGATATGGCTTCACCAAGGAAGTGATGA...TTCAGGCAGACCTGGAAGCTGTTCAGCTCTCACATGAATATCGACATTACAGAT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR-3UTR TCA 90 bp TGGATCGGTTTCGATACAATGTTTCCAGCAAACTTGATTGTATGTTCTCGCGACAGAATTGCCCAAAGCTaGAGTAGACTGATTGTTCCC +
Preference number: 2 (lower is better)
Translates to: WIGFDTMFPANLIVCSRDRIAQS*SRLIVP
Trigger: GGGAACAATCAGTCTACTTCAGCTTTGGGCAATTCT...GTCGCGAGAACATACAATCAAGTTTGCTGGAAACATTGTATCGAAACCGATCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR-3UTR TCA 90 bp TGGATCGGTTTCGATACAATGTTTCCAGCAAACTTGATTGTATGTTCTCGCGACGTCACCTTGTTAGCTTaGTACTGCACAATATGTGGG +
Preference number: 2 (lower is better)
Translates to: WIGFDTMFPANLIVCSRDVTLLA*YCTICG
Trigger: CCCACATATTGTGCAGTATCAAGCTAACAAGGTGAC...GTCGCGAGAACATACAATCAAGTTTGCTGGAAACATTGTATCGAAACCGATCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR-3UTR CCA 90 bp ATTTTCAGCATAAAGTTTCACATGGAGAATAAGGGAGATAGTCTAGTGAGAAGCGCCTATGAGGCACTTTaGGTGATGAAGACCAGGCTG +
Preference number: 2 (lower is better)
Translates to: IFSIKFHMENKGDSLVRSAYEAL*VMKTRL
Trigger: CAGCCTGGTCTTCATCACCCAAAGTGCCTCATAGGC...GCTTCTCACTAGACTATCTCCCTTATTCTCCATGTGAAACTTTATGCTGAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286719.12
ENST00000511880.7
ENST00000652700.1
3UTR-3UTR CCA 90 bp AAAATAACAGCCTCCTCCTCGAATAGTGTTGGCCTTGCAGCCCTCTTGAGCCATGTACCAGATGTTTCTTaGTTTCATACAAAAGGTTCA +
Preference number: 2 (lower is better)
Translates to: KITASSSNSVGLAALLSHVPDVS*FHTKGS
Trigger: TGAACCTTTTGTATGAAACCAAGAAACATCTGGTAC...ATGGCTCAAGAGGGCTGCAAGGCCAACACTATTCGAGGAGGAGGCTGTTATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR-3UTR CCA 90 bp TGGATCGGTTTCGATACAATGTTTCCAGCAAACTTGATTGTATGTTCTCGCGACTATCAGAGTGGCCAGTaGAAGCCAACAGAAAACATC +
Preference number: 2 (lower is better)
Translates to: WIGFDTMFPANLIVCSRDYQSGQ*KPTENI
Trigger: GATGTTTTCTGTTGGCTTCCACTGGCCACTCTGATA...GTCGCGAGAACATACAATCAAGTTTGCTGGAAACATTGTATCGAAACCGATCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR-3UTR CCA 90 bp ATCTGTAATGTCGATATTCATGTGAGAGCTGAACAGCTTCCAGGTCTGCCTGAAAAATGGTCTCTAGGTTaGATCGGTTTCGATACAATG +
Preference number: 2 (lower is better)
Translates to: ICNVDIHVRAEQLPGLPEKWSLG*IGFDTM
Trigger: CATTGTATCGAAACCGATCCAACCTAGAGACCATTT...TTCAGGCAGACCTGGAAGCTGTTCAGCTCTCACATGAATATCGACATTACAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR-3UTR CCA 90 bp ATCTGTAATGTCGATATTCATGTGAGAGCTGAACAGCTTCCAGGTCTGCCTGAACAACTTCATAGTAGTTaGAGGCAGAAAAGATTGTTA +
Preference number: 2 (lower is better)
Translates to: ICNVDIHVRAEQLPGLPEQLHSS*RQKRLL
Trigger: TAACAATCTTTTCTGCCTCCAACTACTATGAAGTTG...TTCAGGCAGACCTGGAAGCTGTTCAGCTCTCACATGAATATCGACATTACAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR-3UTR GCA 90 bp TTTCCTTGCTCCTCTCTATTTTGTCCAAAAGCTCCAGATCAGTTATGTCTGACACAACAGAAAACATCTTaGAGGGTTCTTAGTATTTCC +
Preference number: 2 (lower is better)
Translates to: FPCSSLFCPKAPDQLCLTQQKTS*RVLSIS
Trigger: GGAAATACTAAGAACCCTGCAAGATGTTTTCTGTTG...TGTCAGACATAACTGATCTGGAGCTTTTGGACAAAATAGAGAGGAGCAAGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR-3UTR GCA 90 bp TCTAGGTTGGATCGGTTTCGATACAATGTTTCCAGCAAACTTGATTGTATGTTCGAACGGATCAGGAATTaGATGTTGTATTTTTGTAGC +
Preference number: 2 (lower is better)
Translates to: SRLDRFRYNVSSKLDCMFERIRN*MLYFCS
Trigger: GCTACAAAAATACAACATGCAATTCCTGATCCGTTC...GAACATACAATCAAGTTTGCTGGAAACATTGTATCGAAACCGATCCAACCTAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR GCA 72 bp CACCGCTCTAGCTCCAGTTCCACGGAGCTCCGCACCTaGCGGGAGAGCTCCCGCCCGTCCAGGGAACCGCTG +
Preference number: 3 (lower is better)
Translates to: HRSSSSSTELRT*RESSRPSREPL
Trigger: CAGCGGTTCCCTGGACGGGCGGGAGCTCTCCCGGCAGGTGCGGAGCTCCGTGGAACTGGAGCTAGAGCGGTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR GCA 72 bp CCTGCCGGGAGAGCTCCCGCCCGTCCAGGGAACCGCTaGAGGGGATGCTGGAGGACCTGCTGGTTTTCTGGG +
Preference number: 3 (lower is better)
Translates to: PAGRAPARPGNR*RGCWRTCWFSG
Trigger: CCCAGAAAACCAGCAGGTCCTCCAGCATCCCCTGCAGCGGTTCCCTGGACGGGCGGGAGCTCTCCCGGCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR CCA 72 bp GCTCCCGCCCGTCCAGGGAACCGCTGCAGGGGATGCTaGAGGACCTGCTGGTTTTCTGGGCCTTGTAGGAGC +
Preference number: 3 (lower is better)
Translates to: APARPGNRCRGC*RTCWFSGPCRS
Trigger: GCTCCTACAAGGCCCAGAAAACCAGCAGGTCCTCCAGCATCCCCTGCAGCGGTTCCCTGGACGGGCGGGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR GCA 72 bp AGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTaGGGTGAGCCGAGATCGCGCCAATGCACTCCAGCC +
Preference number: 3 (lower is better)
Translates to: RLRQENRLGGGL*GEPRSRQCTPA
Trigger: GGCTGGAGTGCATTGGCGCGATCTCGGCTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286719.12
ENST00000511880.7
ENST00000652700.1
3UTR GCA 72 bp AGAGCTCCCGCCCGTCCAGGGAACCGCTGCAGGGGATaGTGGAGGACCTGCTGGTTTTCTGGGCCTTGTAGG +
Preference number: 3 (lower is better)
Translates to: RAPARPGNRCRG*WRTCWFSGPCR
Trigger: CCTACAAGGCCCAGAAAACCAGCAGGTCCTCCAGCATCCCCTGCAGCGGTTCCCTGGACGGGCGGGAGCTCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR GCA 72 bp GGCTCCTCTTTCTCTCCGGTCACCAGGAGGCCTGCTTaGTGCCGGCACCGCTCTAGCTCCAGTTCCACGGAG +
Preference number: 3 (lower is better)
Translates to: GSSFSPVTRRPA*CRHRSSSSSTE
Trigger: CTCCGTGGAACTGGAGCTAGAGCGGTGCCGGCAGCAAGCAGGCCTCCTGGTGACCGGAGAGAAAGAGGAGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR GCA 72 bp TCCTCTTTCTCTCCGGTCACCAGGAGGCCTGCTTGCTaGCGGCACCGCTCTAGCTCCAGTTCCACGGAGCTC +
Preference number: 3 (lower is better)
Translates to: SSFSPVTRRPAC*RHRSSSSSTEL
Trigger: GAGCTCCGTGGAACTGGAGCTAGAGCGGTGCCGGCAGCAAGCAGGCCTCCTGGTGACCGGAGAGAAAGAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR CCA 72 bp CCAGGGAACCGCTGCAGGGGATGCTGGAGGACCTGCTaGTTTTCTGGGCCTTGTAGGAGCCAAGCCGAAGGG +
Preference number: 3 (lower is better)
Translates to: PGNRCRGCWRTC*FSGPCRSQAEG
Trigger: CCCTTCGGCTTGGCTCCTACAAGGCCCAGAAAACCAGCAGGTCCTCCAGCATCCCCTGCAGCGGTTCCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR GCA 72 bp CGTCCAGGGAACCGCTGCAGGGGATGCTGGAGGACCTaGTGGTTTTCTGGGCCTTGTAGGAGCCAAGCCGAA +
Preference number: 3 (lower is better)
Translates to: RPGNRCRGCWRT*WFSGPCRSQAE
Trigger: TTCGGCTTGGCTCCTACAAGGCCCAGAAAACCAGCAGGTCCTCCAGCATCCCCTGCAGCGGTTCCCTGGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR GCA 72 bp AGCTGTGGCCTCAGCATCCGCCATGGCAGTCCTAGGTaGAACACAGACTCCACCGCTGCTGCCCAGTCACTC +
Preference number: 3 (lower is better)
Translates to: SCGLSIRHGSPR*NTDSTAAAQSL
Trigger: GAGTGACTGGGCAGCAGCGGTGGAGTCTGTGTTGCACCTAGGACTGCCATGGCGGATGCTGAGGCCACAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR-3UTR CAA 90 bp CATTCTGAGGCATCGCCCTCTGGGCAGGATTTCTCCACAAGGCGGAAGGCCTCCGTGAAAACACTGAGTTaGGGTGTACAGGGACACAGC +
Preference number: 3 (lower is better)
Translates to: HSEASPSGQDFSTRRKASVKTLS*GVQGHS
Trigger: GCTGTGTCCCTGTACACCCAAACTCAGTGTTTTCAC...GGAGGCCTTCCGCCTTGTGGAGAAATCCTGCCCAGAGGGCGATGCCTCAGAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR CCA 72 bp ACAGGATATCTACAACCTGCCTCCACTCCTCCTGAGTaGGCTTCCGCAGCTCTCCGGCTTCAGAGTCTGCTT +
Preference number: 3 (lower is better)
Translates to: TGYLQPASTPPE*ASAALRLQSLL
Trigger: AAGCAGACTCTGAAGCCGGAGAGCTGCGGAAGCCCACTCAGGAGGAGTGGAGGCAGGTTGTAGATATCCTGT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR-3UTR CAA 90 bp CTACTCAGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGTCCACAAAGTCACCGTaGAACACATATGACCGTTCT +
Preference number: 3 (lower is better)
Translates to: LLRRLRQENRLGGGLCGESTKSP*NTYDRS
Trigger: AGAACGGTCATATGTGTTCAACGGTGACTTTGTGGA...CTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCTGAGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR-3UTR CAA 90 bp CCTGCTGGTTTTCTGGGCCTTGTAGGAGCCAAGCCGAAGGGGCGAAGAGGGAAGTTGCTCCTCTCTATTTaGTCCAAAAGCTCCAGATCA +
Preference number: 3 (lower is better)
Translates to: PAGFLGLVGAKPKGRRGKLLLSI*SKSSRS
Trigger: TGATCTGGAGCTTTTGGACAAAATAGAGAGGAGCAA...CTTCCCTCTTCGCCCCTTCGGCTTGGCTCCTACAAGGCCCAGAAAACCAGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR TCA 72 bp TGTCTCGTTTTGCACCTCATGGTGGAAACTATCTCATaGTCCGCTGGCCTCCGACTCTCAGAGTGCTGGGAT +
Preference number: 3 (lower is better)
Translates to: CLVLHLMVETIS*SAGLRLSECWD
Trigger: ATCCCAGCACTCTGAGAGTCGGAGGCCAGCGGATCATGAGATAGTTTCCACCATGAGGTGCAAAACGAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR TCA 72 bp ACACAGACTCCACCGCTGCTGCCCAGTCACTCAAGGTaGTTAAACCTACAGGTGAGAGCTAACCTGTTGCCT +
Preference number: 3 (lower is better)
Translates to: TQTPPLLPSHSR*LNLQVRANLLP
Trigger: AGGCAACAGGTTAGCTCTCACCTGTAGGTTTAATCACCTTGAGTGACTGGGCAGCAGCGGTGGAGTCTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR TCA 72 bp GCCACTGTCTTTAGCATTTGTAGCTTGTGGGCATTCTaGGGCATCGCCCTCTGGGCAGGATTTCTCCACAAG +
Preference number: 3 (lower is better)
Translates to: ATVFSICSLWAF*GIALWAGFLHK
Trigger: CTTGTGGAGAAATCCTGCCCAGAGGGCGATGCCTCAGAATGCCCACAAGCTACAAATGCTAAAGACAGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR-3UTR CAA 90 bp GCTGGTTTTCTGGGCCTTGTAGGAGCCAAGCCGAAGGGGCGAAGAGGGAAGAGACATTTCAGCCAACAATaGCCTATTCCAGGGTTCAAA +
Preference number: 3 (lower is better)
Translates to: AGFLGLVGAKPKGRRGKRHFSQQ*PIPGFK
Trigger: TTTGAACCCTGGAATAGGCAATTGTTGGCTGAAATG...TCTCTTCCCTCTTCGCCCCTTCGGCTTGGCTCCTACAAGGCCCAGAAAACCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR TCA 72 bp GTCTCCACACACTGTGATCTCCTCACTGTAACAGGTTaGGACCCGGTTGATGTTTGGCAGCTGTACCAGATG +
Preference number: 3 (lower is better)
Translates to: VSTHCDLLTVTG*DPVDVWQLYQM
Trigger: CATCTGGTACAGCTGCCAAACATCAACCGGGTCTCAACCTGTTACAGTGAGGAGATCACAGTGTGTGGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR GCA 72 bp GCACTTTGGGTGATGAAGACCAGGCTGTTCTTAGTGTaGACCTGGACTGCTGCAGCCACTGTCTTTAGCATT +
Preference number: 3 (lower is better)
Translates to: ALWVMKTRLFLV*TWTAAATVFSI
Trigger: AATGCTAAAGACAGTGGCTGCAGCAGTCCAGGTGCACACTAAGAACAGCCTGGTCTTCATCACCCAAAGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR-3UTR CAA 90 bp TTAGTGTGCACCTGGACTGCTGCAGCCACTGTCTTTAGCATTTGTAGCTTGTGGGTGAGAGCTAACCTGTaGCCTTGTCACCTAGAAGTC +
Preference number: 3 (lower is better)
Translates to: LVCTWTAAATVFSICSLWVRANL*PCHLEV
Trigger: GACTTCTAGGTGACAAGGCAACAGGTTAGCTCTCAC...CCACAAGCTACAAATGCTAAAGACAGTGGCTGCAGCAGTCCAGGTGCACACTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR GCA 72 bp GAGCTCTTCTGGTTGGCTCTTCTCTTCTCCTCCATCTaGTTCTCACTCTTCTGTCTCGTTTTGCACCTCATG +
Preference number: 3 (lower is better)
Translates to: ELFWLALLFSSI*FSLFCLVLHLM
Trigger: CATGAGGTGCAAAACGAGACAGAAGAGTGAGAAGCAGATGGAGGAGAAGAGAAGAGCCAACCAGAAGAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR CCA 72 bp TCTAGTGAGAAGCTGAGCATTGCCTATGAGGCACTTTaGGTGATGAAGACCAGGCTGTTCTTAGTGTGCACC +
Preference number: 3 (lower is better)
Translates to: SSEKLSIAYEAL*VMKTRLFLVCT
Trigger: GGTGCACACTAAGAACAGCCTGGTCTTCATCACCCAAAGTGCCTCATAGGCAATGCTCAGCTTCTCACTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR-3UTR CAA 90 bp ATCTGTAATGTCGATATTCATGTGAGAGCTGAACAGCTTCCAGGTCTGCCTGAACAGGTTGAGACCCGGTaGATGTTTGGCAGCTGTACC +
Preference number: 3 (lower is better)
Translates to: ICNVDIHVRAEQLPGLPEQVETR*MFGSCT
Trigger: GGTACAGCTGCCAAACATCAACCGGGTCTCAACCTG...TTCAGGCAGACCTGGAAGCTGTTCAGCTCTCACATGAATATCGACATTACAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR-3UTR CAA 90 bp TTAGTGTGCACCTGGACTGCTGCAGCCACTGTCTTTAGCATTTGTAGCTTGTGGCTCTTCTGTCTCGTTTaGCACCTCATGGTGGAAACT +
Preference number: 3 (lower is better)
Translates to: LVCTWTAAATVFSICSLWLFCLV*HLMVET
Trigger: AGTTTCCACCATGAGGTGCAAAACGAGACAGAAGAG...CCACAAGCTACAAATGCTAAAGACAGTGGCTGCAGCAGTCCAGGTGCACACTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR CCA 72 bp AGGCGGAAGGCCTCCAGGAACTCATTGATATCAATGTaGCCATCTTTGTTGAAATCAATGCTCCGAGCAAGG +
Preference number: 3 (lower is better)
Translates to: RRKASRNSLISM*PSLLKSMLRAR
Trigger: CCTTGCTCGGAGCATTGATTTCAACAAAGATGGCCACATTGATATCAATGAGTTCCTGGAGGCCTTCCGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR-3UTR CAA 90 bp TTAGTGTGCACCTGGACTGCTGCAGCCACTGTCTTTAGCATTTGTAGCTTGTGGGATTGTTCCCTGTCTTaGGAACTTCCCAGGAAAATG +
Preference number: 3 (lower is better)
Translates to: LVCTWTAAATVFSICSLWDCSLS*ELPRKM
Trigger: CATTTTCCTGGGAAGTTCCAAAGACAGGGAACAATC...CCACAAGCTACAAATGCTAAAGACAGTGGCTGCAGCAGTCCAGGTGCACACTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR-3UTR CAA 90 bp TTAGTGTGCACCTGGACTGCTGCAGCCACTGTCTTTAGCATTTGTAGCTTGTGGTCCTTCCCGTGTACCTaGTATTTATTCATCACTTCC +
Preference number: 3 (lower is better)
Translates to: LVCTWTAAATVFSICSLWSFPCT*YLFITS
Trigger: GGAAGTGATGAATAAATACAAGGTACACGGGAAGGA...CCACAAGCTACAAATGCTAAAGACAGTGGCTGCAGCAGTCCAGGTGCACACTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR-3UTR CAA 90 bp AAAATAACAGCCTCCTCCTCGAATAGTGTTGGCCTTGCAGCCCTCTTGAGCCATCCATATCCATTAGAATaGCCCAAAGCTGAAGTAGAC +
Preference number: 3 (lower is better)
Translates to: KITASSSNSVGLAALLSHPYPLE*PKAEVD
Trigger: GTCTACTTCAGCTTTGGGCAATTCTAATGGATATGG...ATGGCTCAAGAGGGCTGCAAGGCCAACACTATTCGAGGAGGAGGCTGTTATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR TCA 72 bp TCACAGATGCAGTCATCTGTAATGTCGATATTCATGTaGGAGCTGAACAGCTTCCAGGTCTGCCTGAACTCG +
Preference number: 3 (lower is better)
Translates to: SQMQSSVMSIFM*ELNSFQVCLNS
Trigger: CGAGTTCAGGCAGACCTGGAAGCTGTTCAGCTCTCACATGAATATCGACATTACAGATGACTGCATCTGTGA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR GCA 72 bp ATCAGAGTGGCCAGTGGAAGCCAACAGAAAACATCTTaGAGGGTTCTTAGTATTTCCTTCCCGTGTACCTTG +
Preference number: 3 (lower is better)
Translates to: IRVASGSQQKTS*RVLSISFPCTL
Trigger: CAAGGTACACGGGAAGGAAATACTAAGAACCCTGCAAGATGTTTTCTGTTGGCTTCCACTGGCCACTCTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR-3UTR CAA 90 bp AAAATAACAGCCTCCTCCTCGAATAGTGTTGGCCTTGCAGCCCTCTTGAGCCATTTATTCATCACTTCCTaGGTGAAGCCATATCGTAAG +
Preference number: 3 (lower is better)
Translates to: KITASSSNSVGLAALLSHLFITS*VKPYRK
Trigger: CTTACGATATGGCTTCACCAAGGAAGTGATGAATAA...ATGGCTCAAGAGGGCTGCAAGGCCAACACTATTCGAGGAGGAGGCTGTTATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR GCA 72 bp AAACCTGGGTCTCTGGACAACTTCATAGAACCAAACTaGCATTTCAGCCAACAATTGCCTATTCCAGGGTTC +
Preference number: 3 (lower is better)
Translates to: KPGSLDNFIEPN*HFSQQLPIPGF
Trigger: GAACCCTGGAATAGGCAATTGTTGGCTGAAATGGCAGTTTGGTTCTATGAAGTTGTCCAGAGACCCAGGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR CCA 72 bp CATAGGCCCCTCTGTTGCTGCCAACTTCATAGTAGTTaGAGGCAGAAAAGATTGTTAATACCTTGCGGTTGT +
Preference number: 3 (lower is better)
Translates to: HRPLCCCQLHSS*RQKRLLIPCGC
Trigger: ACAACCGCAAGGTATTAACAATCTTTTCTGCCTCCAACTACTATGAAGTTGGCAGCAACAGAGGGGCCTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR TCA 72 bp AAAAGCTCCAGATCAGTTATGTCTGACACCCCACCATaGAGAATTAGAACTTTCTCATCTATCAGAGTGGCC +
Preference number: 3 (lower is better)
Translates to: KSSRSVMSDTPP*RIRTFSSIRVA
Trigger: GGCCACTCTGATAGATGAGAAAGTTCTAATTCTTCATGGTGGGGTGTCAGACATAACTGATCTGGAGCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR TCA 72 bp CCATATCCATTAGAATTGCCCAAAGCTGAAGTAGACTaGTTGTTCCCTGTCTTTGGAACTTCCCAGGAAAAT +
Preference number: 3 (lower is better)
Translates to: PYPLELPKAEVD*LFPVFGTSQEN
Trigger: ATTTTCCTGGGAAGTTCCAAAGACAGGGAACAATCAGTCTACTTCAGCTTTGGGCAATTCTAATGGATATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR CCA 72 bp ACTATACCTAAGTTCTACTTTGTGAAGATTGTGAGGTaGGGTTGGGGCACTCATATACTTAAAACACATACA +
Preference number: 3 (lower is better)
Translates to: TIPKFYFVKIVR*GWGTHILKTHT
Trigger: TGTATGTGTTTTAAGTATATGAGTGCCCCAACCCCACCTCACAATCTTCACAAAGTAGAACTTAGGTATAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286719.12
ENST00000511880.7
ENST00000652700.1
CDS-3UTR GCA 90 bp CTACTCAGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGACGGAGCTCCGCACCTaGCGGGAGAGCTCCCGCCCG +
Preference number: 4 (lower is better)
Translates to: LLRRLRQENRLGGGLCGETELRT*RESSRP
Trigger: CGGGCGGGAGCTCTCCCGGCAGGTGCGGAGCTCCGT...CTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCTGAGTAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286719.12
ENST00000511880.7
CDS-3UTR GCA 90 bp CATTCTGAGGCATCGCCCTCTGGGCAGGATTTCTCCACAAGGCGGAAGGCCTCCACGGAGCTCCGCACCTaGCGGGAGAGCTCCCGCCCG +
Preference number: 4 (lower is better)
Translates to: HSEASPSGQDFSTRRKASTELRT*RESSRP
Trigger: CGGGCGGGAGCTCTCCCGGCAGGTGCGGAGCTCCGT...GGAGGCCTTCCGCCTTGTGGAGAAATCCTGCCCAGAGGGCGATGCCTCAGAATG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR GCA 90 bp TCCGCAGCTCTCCGGCTTCAGAGTCTGCTTCTGAGGCTGAGCGGGAGGGCTCCTGGTCACCAGGAGGCCTaGTTGCTGCCGGCACCGCTC +
Preference number: 4 (lower is better)
Translates to: SAALRLQSLLLRLSGRAPGHQEA*LLPAPL
Trigger: GAGCGGTGCCGGCAGCAAGCAGGCCTCCTGGTGACC...AGGAGCCCTCCCGCTCAGCCTCAGAAGCAGACTCTGAAGCCGGAGAGCTGCGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR GCA 90 bp AGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGCCGAGAACCAGGAGGCCTGCTTaGTGCCGGCACCGCTCTAGC +
Preference number: 4 (lower is better)
Translates to: RRLRQENRLGGGLCGEPRTRRPA*CRHRSS
Trigger: GCTAGAGCGGTGCCGGCAGCAAGCAGGCCTCCTGGT...TCTCGGCTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286719.12
ENST00000511880.7
CDS-3UTR GCA 90 bp CTACTCAGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGGGTCACCAGGAGGCCTaGTTGCTGCCGGCACCGCTC +
Preference number: 4 (lower is better)
Translates to: LLRRLRQENRLGGGLCGEGHQEA*LLPAPL
Trigger: GAGCGGTGCCGGCAGCAAGCAGGCCTCCTGGTGACC...CTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCTGAGTAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286719.12
ENST00000511880.7
CDS-3UTR TCA 90 bp AGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGCCGAGAGGGCTGGCCCCAGTTTaGCATAGGCCCCTCTGTTGC +
Preference number: 4 (lower is better)
Translates to: RRLRQENRLGGGLCGEPRGLAPV*HRPLCC
Trigger: GCAACAGAGGGGCCTATGTCAAACTGGGGCCAGCCC...TCTCGGCTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286719.12
ENST00000511880.7
ENST00000652700.1
CDS-3UTR CCA 90 bp AGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGCCGAGATGGGAAGGAGAGGCGTaGCCCCGTGTAACTGTCGGG +
Preference number: 4 (lower is better)
Translates to: RRLRQENRLGGGLCGEPRWEGEA*PRVTVG
Trigger: CCCGACAGTTACACGGGGCCACGCCTCTCCTTCCCA...TCTCGGCTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286719.12
ENST00000511880.7
CDS-3UTR TCA 90 bp AGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGCCGAGAGCCTTGCAGCCCTCTTaGGCCATGGGATCACTCCAC +
Preference number: 4 (lower is better)
Translates to: RRLRQENRLGGGLCGEPRALQPS*AMGSLH
Trigger: GTGGAGTGATCCCATGGCTCAAGAGGGCTGCAAGGC...TCTCGGCTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286719.12
ENST00000511880.7
CDS-3UTR TCA 90 bp AGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGCCGAGAAGCTTGTGGGCATTCTaGGGCATCGCCCTCTGGGCA +
Preference number: 4 (lower is better)
Translates to: RRLRQENRLGGGLCGEPRSLWAF*GIALWA
Trigger: TGCCCAGAGGGCGATGCCTCAGAATGCCCACAAGCT...TCTCGGCTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286719.12
ENST00000511880.7
ENST00000652700.1
CDS-3UTR TCA 90 bp AGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGCCGAGAAGCTACTCAGGAGGCTaGGGCAGGAGAATCGCCTGG +
Preference number: 4 (lower is better)
Translates to: RRLRQENRLGGGLCGEPRSYSGG*GRRIAW
Trigger: CCAGGCGATTCTCCTGCCTCAGCCTCCTGAGTAGCT...TCTCGGCTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286719.12
ENST00000511880.7
ENST00000652700.1
CDS-3UTR CCA 90 bp AGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGCCGAGACGCCGGTACCATCTCTaGATCAGGGCTGCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: RRLRQENRLGGGLCGEPRRRYHL*IRAAAL
Trigger: CAAGGCAGCAGCCCTGATCCAGAGATGGTACCGGCG...TCTCGGCTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286719.12
ENST00000511880.7
CDS-3UTR CCA 90 bp GGCTTCCGCAGCTCTCCGGCTTCAGAGTCTGCTTCTGAGGCTGAGCGGGAGGGCCGCTGCAGGGGATGCTaGAGGACCTGCTGGTTTTCT +
Preference number: 4 (lower is better)
Translates to: GFRSSPASESASEAEREGRCRGC*RTCWFS
Trigger: AGAAAACCAGCAGGTCCTCCAGCATCCCCTGCAGCG...GCCCTCCCGCTCAGCCTCAGAAGCAGACTCTGAAGCCGGAGAGCTGCGGAAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR TCA 90 bp CTACTCAGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGAGCTACTCAGGAGGCTaGGGCAGGAGAATCGCCTGG +
Preference number: 4 (lower is better)
Translates to: LLRRLRQENRLGGGLCGESYSGG*GRRIAW
Trigger: CCAGGCGATTCTCCTGCCTCAGCCTCCTGAGTAGCT...CTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCTGAGTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286719.12
ENST00000511880.7
ENST00000652700.1
CDS-3UTR TCA 90 bp AGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGCCGAGAGGAGGGTGGATCACCTaGGGTTGGGAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: RRLRQENRLGGGLCGEPRGGWIT*GWEFKT
Trigger: GGTCTTGAACTCCCAACCTCAGGTGATCCACCCTCC...TCTCGGCTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286719.12
ENST00000511880.7
ENST00000652700.1
CDS-3UTR GCA 90 bp AGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGCCGAGACTGGATCAGGGCTGCTaGCTTGAAGGCTCTCTCTGC +
Preference number: 4 (lower is better)
Translates to: RRLRQENRLGGGLCGEPRLDQGC*LEGSLC
Trigger: GCAGAGAGAGCCTTCAAGGCAGCAGCCCTGATCCAG...TCTCGGCTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286719.12
ENST00000511880.7
CDS-3UTR CCA 90 bp AGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGCCGAGACGCTGCAGGGGATGCTaGAGGACCTGCTGGTTTTCT +
Preference number: 4 (lower is better)
Translates to: RRLRQENRLGGGLCGEPRRCRGC*RTCWFS
Trigger: AGAAAACCAGCAGGTCCTCCAGCATCCCCTGCAGCG...TCTCGGCTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286719.12
ENST00000511880.7
CDS-3UTR CCA 90 bp AGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGCCGAGAATGTGGGGTCAGGGCTaGCCCCAGTTTGACATAGGC +
Preference number: 4 (lower is better)
Translates to: RRLRQENRLGGGLCGEPRMWGQG*PQFDIG
Trigger: GCCTATGTCAAACTGGGGCCAGCCCTGACCCCACAT...TCTCGGCTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286719.12
ENST00000511880.7
ENST00000652700.1
CDS-3UTR TCA 90 bp GGCTTCCGCAGCTCTCCGGCTTCAGAGTCTGCTTCTGAGGCTGAGCGGGAGGGCCCCACCCCTCCACACTaGAATACACAGGTGATTCTG +
Preference number: 4 (lower is better)
Translates to: GFRSSPASESASEAEREGPTPPH*NTQVIL
Trigger: CAGAATCACCTGTGTATTTCAGTGTGGAGGGGTGGG...GCCCTCCCGCTCAGCCTCAGAAGCAGACTCTGAAGCCGGAGAGCTGCGGAAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR GCA 90 bp AGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGCCGAGATCTCTGGATCAGGGCTaGTGCCTTGAAGGCTCTCTC +
Preference number: 4 (lower is better)
Translates to: RRLRQENRLGGGLCGEPRSLDQG*CLEGSL
Trigger: GAGAGAGCCTTCAAGGCAGCAGCCCTGATCCAGAGA...TCTCGGCTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286719.12
ENST00000511880.7
CDS-3UTR GCA 90 bp CTACTCAGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGAACCGCTGCAGGGGATaGTGGAGGACCTGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: LLRRLRQENRLGGGLCGENRCRG*WRTCWF
Trigger: AAACCAGCAGGTCCTCCAGCATCCCCTGCAGCGGTT...CTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCTGAGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286719.12
ENST00000511880.7
CDS-3UTR GCA 90 bp AGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGCCGAGAAGACTCCACCGCTGCTaGCCAGTCACTCAAGGTGAT +
Preference number: 4 (lower is better)
Translates to: RRLRQENRLGGGLCGEPRRLHRC*PVTQGD
Trigger: ATCACCTTGAGTGACTGGGCAGCAGCGGTGGAGTCT...TCTCGGCTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286719.12
ENST00000511880.7
CDS-3UTR CCA 90 bp AGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGCCGAGATCCTGTCTTCAGAGTTaGCTGAGGGATCCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: RRLRQENRLGGGLCGEPRSCLQS*LRDPRL
Trigger: CAGCCTGGGATCCCTCAGCCAACTCTGAAGACAGGA...TCTCGGCTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286719.12
ENST00000511880.7
CDS-3UTR CCA 90 bp GCTGGTTTTCTGGGCCTTGTAGGAGCCAAGCCGAAGGGGCGAAGAGGGAAGAGATGGGAAGGAGAGGCGTaGCCCCGTGTAACTGTCGGG +
Preference number: 4 (lower is better)
Translates to: AGFLGLVGAKPKGRRGKRWEGEA*PRVTVG
Trigger: CCCGACAGTTACACGGGGCCACGCCTCTCCTTCCCA...TCTCTTCCCTCTTCGCCCCTTCGGCTTGGCTCCTACAAGGCCCAGAAAACCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR CCA 90 bp CTACTCAGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGACCAGGGCAGTTGCATaGTCAGGCAGGAGTGGGAAG +
Preference number: 4 (lower is better)
Translates to: LLRRLRQENRLGGGLCGETRAVA*SGRSGK
Trigger: CTTCCCACTCCTGCCTGACCATGCAACTGCCCTGGT...CTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCTGAGTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286719.12
ENST00000511880.7
CDS-3UTR CCA 90 bp AGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGCCGAGAGGAGAAACCATGGGATaGGTCCCTGTGCAGAGCTCT +
Preference number: 4 (lower is better)
Translates to: RRLRQENRLGGGLCGEPRGETMG*VPVQSS
Trigger: AGAGCTCTGCACAGGGACCCATCCCATGGTTTCTCC...TCTCGGCTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286719.12
ENST00000511880.7
CDS-3UTR CCA 90 bp TCCGCAGCTCTCCGGCTTCAGAGTCTGCTTCTGAGGCTGAGCGGGAGGGCTCCTTTCGGGGAGAAACCATaGGATGGGTCCCTGTGCAGA +
Preference number: 4 (lower is better)
Translates to: SAALRLQSLLLRLSGRAPFGEKP*DGSLCR
Trigger: TCTGCACAGGGACCCATCCCATGGTTTCTCCCCGAA...AGGAGCCCTCCCGCTCAGCCTCAGAAGCAGACTCTGAAGCCGGAGAGCTGCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR TCA 90 bp CTACTCAGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGTCAGGGCTGCTGCCTTaGAGGCTCTCTCTGCATTCT +
Preference number: 4 (lower is better)
Translates to: LLRRLRQENRLGGGLCGESGLLP*RLSLHS
Trigger: AGAATGCAGAGAGAGCCTTCAAGGCAGCAGCCCTGA...CTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCTGAGTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286719.12
ENST00000511880.7
CDS-3UTR TCA 90 bp AGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGCCGAGATCCTTTGCCTCATGGTaGGTGTGTGGGTCACCTTGT +
Preference number: 4 (lower is better)
Translates to: RRLRQENRLGGGLCGEPRSFASW*VCGSPC
Trigger: ACAAGGTGACCCACACACTCACCATGAGGCAAAGGA...TCTCGGCTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286719.12
ENST00000511880.7
ENST00000652700.1
CDS-3UTR TCA 90 bp CTACTCAGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGCAGCATGTTGTCTGCTaGGCTGTTCACCAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: LLRRLRQENRLGGGLCGEQHVVC*AVHQLW
Trigger: CCACAGCTGGTGAACAGCTCAGCAGACAACATGCTG...CTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCTGAGTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286719.12
ENST00000511880.7
ENST00000652700.1
CDS-3UTR TCA 90 bp CATTCTGAGGCATCGCCCTCTGGGCAGGATTTCTCCACAAGGCGGAAGGCCTCCGGAGGGTGGATCACCTaGGGTTGGGAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: HSEASPSGQDFSTRRKASGGWIT*GWEFKT
Trigger: GGTCTTGAACTCCCAACCTCAGGTGATCCACCCTCC...GGAGGCCTTCCGCCTTGTGGAGAAATCCTGCCCAGAGGGCGATGCCTCAGAATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR GCA 90 bp CTACTCAGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGCATGGCAGTCCTAGGTaGAACACAGACTCCACCGCT +
Preference number: 4 (lower is better)
Translates to: LLRRLRQENRLGGGLCGEHGSPR*NTDSTA
Trigger: AGCGGTGGAGTCTGTGTTGCACCTAGGACTGCCATG...CTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCTGAGTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286719.12
ENST00000511880.7
CDS-3UTR GCA 90 bp AGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGCCGAGAAACAGCTTCCAGGTCTaGCTGAACTCGTCCAGTGAG +
Preference number: 4 (lower is better)
Translates to: RRLRQENRLGGGLCGEPRNSFQV*LNSSSE
Trigger: CTCACTGGACGAGTTCAGGCAGACCTGGAAGCTGTT...TCTCGGCTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286719.12
ENST00000511880.7
ENST00000652700.1
CDS-3UTR GCA 90 bp CTACTCAGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGAGGCTGTTCTTAGTGTaGACCTGGACTGCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: LLRRLRQENRLGGGLCGERLFLV*TWTAAA
Trigger: GGCTGCAGCAGTCCAGGTGCACACTAAGAACAGCCT...CTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCTGAGTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286719.12
ENST00000511880.7
ENST00000652700.1
CDS-3UTR CCA 90 bp AGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGCCGAGATTCATCTCGGAGTCCTaGGCGAATCTGTCCTCAGTG +
Preference number: 4 (lower is better)
Translates to: RRLRQENRLGGGLCGEPRFISES*ANLSSV
Trigger: CACTGAGGACAGATTCGCCCAGGACTCCGAGATGAA...TCTCGGCTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286719.12
ENST00000511880.7
CDS-3UTR CCA 90 bp CTACTCAGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGGGAGAAACCATGGGATaGGTCCCTGTGCAGAGCTCT +
Preference number: 4 (lower is better)
Translates to: LLRRLRQENRLGGGLCGEGETMG*VPVQSS
Trigger: AGAGCTCTGCACAGGGACCCATCCCATGGTTTCTCC...CTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCTGAGTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286719.12
ENST00000511880.7
CDS-3UTR CCA 90 bp CTACTCAGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGATACTGCACAATATGTaGGGTCAGGGCTGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: LLRRLRQENRLGGGLCGEILHNM*GQGWPQ
Trigger: CTGGGGCCAGCCCTGACCCCACATATTGTGCAGTAT...CTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCTGAGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286719.12
ENST00000511880.7
ENST00000652700.1
CDS-3UTR CCA 90 bp CTACTCAGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGCCTCAGCATCCGCCATaGCAGTCCGACTTTATCTGC +
Preference number: 4 (lower is better)
Translates to: LLRRLRQENRLGGGLCGEPQHPP*QSDFIC
Trigger: GCAGATAAAGTCGGACTGCCATGGCGGATGCTGAGG...CTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCTGAGTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652700.1
CDS-3UTR TCA 90 bp AGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGCCGAGATTTAACATGCAGGCGTaGTCCCCATCCTGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: RRLRQENRLGGGLCGEPRFNMQA*SPSCLQ
Trigger: CTGAAGACAGGATGGGGATCACGCCTGCATGTTAAA...TCTCGGCTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286719.12
ENST00000511880.7
CDS-3UTR TCA 90 bp AGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGCCGAGACGAATCTGTCCTCAGTaGATATGCGGGTCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: RRLRQENRLGGGLCGEPRRICPQ*ICGSGS
Trigger: ACTTCCTGACCCGCATATTCACTGAGGACAGATTCG...TCTCGGCTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286719.12
ENST00000511880.7
CDS-3UTR TCA 90 bp AGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGCCGAGAGCTGTTGTTTCAGTCTaGATGCTTCTACCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: RRLRQENRLGGGLCGEPRAVVSV*MLLPGQ
Trigger: CTGCCCTGGTAGAAGCATTCAGACTGAAACAACAGC...TCTCGGCTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286719.12
CDS-3UTR TCA 90 bp CTACTCAGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGAGGTTGAGACCCGGTTaGTGTTTGGCAGCTGTACCA +
Preference number: 4 (lower is better)
Translates to: LLRRLRQENRLGGGLCGERLRPG*CLAAVP
Trigger: TGGTACAGCTGCCAAACATCAACCGGGTCTCAACCT...CTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCTGAGTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286719.12
ENST00000511880.7
CDS-3UTR TCA 90 bp AGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGCCGAGACTCACTGTAACAGGTTaGGACCCGGTTGATGTTTGG +
Preference number: 4 (lower is better)
Translates to: RRLRQENRLGGGLCGEPRLTVTG*DPVDVW
Trigger: CCAAACATCAACCGGGTCTCAACCTGTTACAGTGAG...TCTCGGCTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286719.12
ENST00000511880.7
CDS-3UTR TCA 90 bp AGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGCCGAGAAGTCTCCACACACTGTaGTCTCCTCACTGTAACAGG +
Preference number: 4 (lower is better)
Translates to: RRLRQENRLGGGLCGEPRSLHTL*SPHCNR
Trigger: CCTGTTACAGTGAGGAGATCACAGTGTGTGGAGACT...TCTCGGCTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286719.12
ENST00000511880.7
CDS-3UTR TCA 90 bp AGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGCCGAGATATTCATGTGAGAGCTaGACAGCTTCCAGGTCTGCC +
Preference number: 4 (lower is better)
Translates to: RRLRQENRLGGGLCGEPRYSCES*TASRSA
Trigger: GGCAGACCTGGAAGCTGTTCAGCTCTCACATGAATA...TCTCGGCTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286719.12
ENST00000511880.7
ENST00000652700.1
CDS-3UTR GCA 90 bp GCTGGTTTTCTGGGCCTTGTAGGAGCCAAGCCGAAGGGGCGAAGAGGGAAGAGAGGAAGATGCTCCAGGTaGAACGCCGCCTCATCTCCA +
Preference number: 4 (lower is better)
Translates to: AGFLGLVGAKPKGRRGKRGRCSR*NAASSP
Trigger: TGGAGATGAGGCGGCGTTGCACCTGGAGCATCTTCC...TCTCTTCCCTCTTCGCCCCTTCGGCTTGGCTCCTACAAGGCCCAGAAAACCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR GCA 90 bp CATTCTGAGGCATCGCCCTCTGGGCAGGATTTCTCCACAAGGCGGAAGGCCTCCGGATGCTGGAGGACCTaGTGGTTTTCTGGGCCTTGT +
Preference number: 4 (lower is better)
Translates to: HSEASPSGQDFSTRRKASGCWRT*WFSGPC
Trigger: ACAAGGCCCAGAAAACCAGCAGGTCCTCCAGCATCC...GGAGGCCTTCCGCCTTGTGGAGAAATCCTGCCCAGAGGGCGATGCCTCAGAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR CCA 90 bp AGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGCCGAGACAGAGCTCTTCTGGTTaGCTCTTCTCTTCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: RRLRQENRLGGGLCGEPRQSSSG*LFSSPP
Trigger: TGGAGGAGAAGAGAAGAGCCAACCAGAAGAGCTCTG...TCTCGGCTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286719.12
ENST00000511880.7
CDS-3UTR CCA 90 bp CTACTCAGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGTTCTTAGTGTGCACCTaGACTGCTGCAGCCACTGTC +
Preference number: 4 (lower is better)
Translates to: LLRRLRQENRLGGGLCGEFLVCT*TAAATV
Trigger: GACAGTGGCTGCAGCAGTCCAGGTGCACACTAAGAA...CTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCTGAGTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286719.12
ENST00000511880.7
ENST00000652700.1
CDS-3UTR CCA 90 bp CTACTCAGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGGCCTATGAGGCACTTTaGGTGATGAAGACCAGGCTG +
Preference number: 4 (lower is better)
Translates to: LLRRLRQENRLGGGLCGEAYEAL*VMKTRL
Trigger: CAGCCTGGTCTTCATCACCCAAAGTGCCTCATAGGC...CTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCTGAGTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286719.12
ENST00000511880.7
ENST00000652700.1
CDS-3UTR TCA 90 bp CTACTCAGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGTTTAACATGCAGGCGTaGTCCCCATCCTGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: LLRRLRQENRLGGGLCGEFNMQA*SPSCLQ
Trigger: CTGAAGACAGGATGGGGATCACGCCTGCATGTTAAA...CTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCTGAGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286719.12
ENST00000511880.7
CDS-3UTR TCA 90 bp CATTCTGAGGCATCGCCCTCTGGGCAGGATTTCTCCACAAGGCGGAAGGCCTCCAGGTTGAGACCCGGTTaGTGTTTGGCAGCTGTACCA +
Preference number: 4 (lower is better)
Translates to: HSEASPSGQDFSTRRKASRLRPG*CLAAVP
Trigger: TGGTACAGCTGCCAAACATCAACCGGGTCTCAACCT...GGAGGCCTTCCGCCTTGTGGAGAAATCCTGCCCAGAGGGCGATGCCTCAGAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR TCA 90 bp CTACTCAGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGCTCACTGTAACAGGTTaGGACCCGGTTGATGTTTGG +
Preference number: 4 (lower is better)
Translates to: LLRRLRQENRLGGGLCGELTVTG*DPVDVW
Trigger: CCAAACATCAACCGGGTCTCAACCTGTTACAGTGAG...CTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCTGAGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286719.12
ENST00000511880.7
CDS-3UTR TCA 90 bp GCTGGTTTTCTGGGCCTTGTAGGAGCCAAGCCGAAGGGGCGAAGAGGGAAGAGAACCGTTGAACACATATaGCCGTTCTGGCGACGGGAG +
Preference number: 4 (lower is better)
Translates to: AGFLGLVGAKPKGRRGKRTVEHI*PFWRRE
Trigger: CTCCCGTCGCCAGAACGGTCATATGTGTTCAACGGT...TCTCTTCCCTCTTCGCCCCTTCGGCTTGGCTCCTACAAGGCCCAGAAAACCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR TCA 90 bp CCTGCTGGTTTTCTGGGCCTTGTAGGAGCCAAGCCGAAGGGGCGAAGAGGGAAGTCCTTTGCCTCATGGTaGGTGTGTGGGTCACCTTGT +
Preference number: 4 (lower is better)
Translates to: PAGFLGLVGAKPKGRRGKSFASW*VCGSPC
Trigger: ACAAGGTGACCCACACACTCACCATGAGGCAAAGGA...CTTCCCTCTTCGCCCCTTCGGCTTGGCTCCTACAAGGCCCAGAAAACCAGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR TCA 90 bp CTACTCAGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGTATTCATGTGAGAGCTaGACAGCTTCCAGGTCTGCC +
Preference number: 4 (lower is better)
Translates to: LLRRLRQENRLGGGLCGEYSCES*TASRSA
Trigger: GGCAGACCTGGAAGCTGTTCAGCTCTCACATGAATA...CTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCTGAGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286719.12
ENST00000511880.7
ENST00000652700.1
CDS-3UTR TCA 90 bp GGCTTCCGCAGCTCTCCGGCTTCAGAGTCTGCTTCTGAGGCTGAGCGGGAGGGCCCTCCAGGAACTCATTaGTATCAATGTGGCCATCTT +
Preference number: 4 (lower is better)
Translates to: GFRSSPASESASEAEREGPPGTH*YQCGHL
Trigger: AAGATGGCCACATTGATATCAATGAGTTCCTGGAGG...GCCCTCCCGCTCAGCCTCAGAAGCAGACTCTGAAGCCGGAGAGCTGCGGAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR GCA 90 bp CTACTCAGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGAGGCCCCTCTGTTGCTaGCAACTTCATAGTAGTTGG +
Preference number: 4 (lower is better)
Translates to: LLRRLRQENRLGGGLCGERPLCC*QLHSSW
Trigger: CCAACTACTATGAAGTTGGCAGCAACAGAGGGGCCT...CTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCTGAGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286719.12
ENST00000511880.7
ENST00000652700.1
CDS-3UTR GCA 90 bp GCTGGTTTTCTGGGCCTTGTAGGAGCCAAGCCGAAGGGGCGAAGAGGGAAGAGACATGGCAGTCCTAGGTaGAACACAGACTCCACCGCT +
Preference number: 4 (lower is better)
Translates to: AGFLGLVGAKPKGRRGKRHGSPR*NTDSTA
Trigger: AGCGGTGGAGTCTGTGTTGCACCTAGGACTGCCATG...TCTCTTCCCTCTTCGCCCCTTCGGCTTGGCTCCTACAAGGCCCAGAAAACCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR GCA 90 bp CCTGCTGGTTTTCTGGGCCTTGTAGGAGCCAAGCCGAAGGGGCGAAGAGGGAAGAACAGCTTCCAGGTCTaGCTGAACTCGTCCAGTGAG +
Preference number: 4 (lower is better)
Translates to: PAGFLGLVGAKPKGRRGKNSFQV*LNSSSE
Trigger: CTCACTGGACGAGTTCAGGCAGACCTGGAAGCTGTT...CTTCCCTCTTCGCCCCTTCGGCTTGGCTCCTACAAGGCCCAGAAAACCAGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR TCA 90 bp CTACTCAGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGGATCCCAGGCTGATCTaGTTTCTTTCAGACCTACAG +
Preference number: 4 (lower is better)
Translates to: LLRRLRQENRLGGGLCGEDPRLI*FLSDLQ
Trigger: CTGTAGGTCTGAAAGAAATCAGATCAGCCTGGGATC...CTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCTGAGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286719.12
ENST00000511880.7
CDS-3UTR TCA 90 bp CTACTCAGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGCCACAAAGTCACCGTTaGACACATATGACCGTTCTG +
Preference number: 4 (lower is better)
Translates to: LLRRLRQENRLGGGLCGEPQSHR*THMTVL
Trigger: CAGAACGGTCATATGTGTTCAACGGTGACTTTGTGG...CTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCTGAGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286719.12
ENST00000511880.7
CDS-3UTR TCA 90 bp AGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGCCGAGACAGATCAGTTATGTCTaGCACCCCACCATGAAGAAT +
Preference number: 4 (lower is better)
Translates to: RRLRQENRLGGGLCGEPRQISYV*HPTMKN
Trigger: ATTCTTCATGGTGGGGTGTCAGACATAACTGATCTG...TCTCGGCTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286719.12
ENST00000511880.7
CDS-3UTR TCA 90 bp AGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGCCGAGAGTCACCTTGTTAGCTTaGTACTGCACAATATGTGGG +
Preference number: 4 (lower is better)
Translates to: RRLRQENRLGGGLCGEPRVTLLA*YCTICG
Trigger: CCCACATATTGTGCAGTATCAAGCTAACAAGGTGAC...TCTCGGCTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286719.12
ENST00000511880.7
ENST00000652700.1
CDS-3UTR TCA 90 bp AGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGCCGAGACCTCCAGGAACTCATTaGTATCAATGTGGCCATCTT +
Preference number: 4 (lower is better)
Translates to: RRLRQENRLGGGLCGEPRPPGTH*YQCGHL
Trigger: AAGATGGCCACATTGATATCAATGAGTTCCTGGAGG...TCTCGGCTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286719.12
ENST00000511880.7
ENST00000652700.1
CDS-3UTR GCA 90 bp CTACTCAGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGCATAGGCCCCTCTGTTaGTGCCAACTTCATAGTAGT +
Preference number: 4 (lower is better)
Translates to: LLRRLRQENRLGGGLCGEHRPLC*CQLHSS
Trigger: ACTACTATGAAGTTGGCAGCAACAGAGGGGCCTATG...CTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCTGAGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286719.12
ENST00000511880.7
ENST00000652700.1
CDS-3UTR GCA 90 bp CTACTCAGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGACTCTGCTAATCCTTTaGCTCATGGTGAGTGTGTGG +
Preference number: 4 (lower is better)
Translates to: LLRRLRQENRLGGGLCGETLLIL*LMVSVW
Trigger: CCACACACTCACCATGAGGCAAAGGATTAGCAGAGT...CTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCTGAGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286719.12
ENST00000511880.7
ENST00000652700.1
CDS-3UTR GCA 90 bp GGCTTCCGCAGCTCTCCGGCTTCAGAGTCTGCTTCTGAGGCTGAGCGGGAGGGCGTAGCAGCATTTCCTTaGTCCTCTCTATTTTGTCCA +
Preference number: 4 (lower is better)
Translates to: GFRSSPASESASEAEREGVAAFP*SSLFCP
Trigger: TGGACAAAATAGAGAGGAGCAAGGAAATGCTGCTAC...GCCCTCCCGCTCAGCCTCAGAAGCAGACTCTGAAGCCGGAGAGCTGCGGAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR CCA 90 bp ACAGCCTCCTCCTCGAATAGTGTTGGCCTTGCAGCCCTCTTGAGCCATGGGATCTCCTGTCTTCAGAGTTaGCTGAGGGATCCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: TASSSNSVGLAALLSHGISCLQS*LRDPRL
Trigger: CAGCCTGGGATCCCTCAGCCAACTCTGAAGACAGGA...GATCCCATGGCTCAAGAGGGCTGCAAGGCCAACACTATTCGAGGAGGAGGCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR CCA 90 bp CTACTCAGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGGACCCGGTTGATGTTTaGCAGCTGTACCAGATGTTT +
Preference number: 4 (lower is better)
Translates to: LLRRLRQENRLGGGLCGEDPVDV*QLYQMF
Trigger: AAACATCTGGTACAGCTGCCAAACATCAACCGGGTC...CTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCTGAGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286719.12
ENST00000511880.7
CDS-3UTR CCA 90 bp AGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGCCGAGATATCAGAGTGGCCAGTaGAAGCCAACAGAAAACATC +
Preference number: 4 (lower is better)
Translates to: RRLRQENRLGGGLCGEPRYQSGQ*KPTENI
Trigger: GATGTTTTCTGTTGGCTTCCACTGGCCACTCTGATA...TCTCGGCTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286719.12
ENST00000511880.7
CDS-3UTR CCA 90 bp CTACTCAGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGTCTCATCTATCAGAGTaGCCAGTGGAAGCCAACAGA +
Preference number: 4 (lower is better)
Translates to: LLRRLRQENRLGGGLCGESHLSE*PVEANR
Trigger: TCTGTTGGCTTCCACTGGCCACTCTGATAGATGAGA...CTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCTGAGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286719.12
ENST00000511880.7
CDS-3UTR CCA 90 bp AGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGCCGAGATCGTTTTGCACCTCATaGTGGAAACTATCTTGCTCC +
Preference number: 4 (lower is better)
Translates to: RRLRQENRLGGGLCGEPRSFCTS*WKLSCS
Trigger: GGAGCAAGATAGTTTCCACCATGAGGTGCAAAACGA...TCTCGGCTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286719.12
CDS-3UTR CCA 90 bp CTACTCAGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGGACTCAGTTGTTCCTTaGCCAAGTTCTTCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: LLRRLRQENRLGGGLCGEDSVVP*PSSSAK
Trigger: CTTGGCTGAAGAACTTGGCCAAGGAACAACTGAGTC...CTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCTGAGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286719.12
ENST00000511880.7
ENST00000652700.1
CDS-3UTR CCA 90 bp TCCGCAGCTCTCCGGCTTCAGAGTCTGCTTCTGAGGCTGAGCGGGAGGGCTCCTAATACAAAATTAGCCTaGTGTGGTGGTGCATGCCTG +
Preference number: 4 (lower is better)
Translates to: SAALRLQSLLLRLSGRAPNTKLA*CGGACL
Trigger: CAGGCATGCACCACCACACCAGGCTAATTTTGTATT...AGGAGCCCTCCCGCTCAGCCTCAGAAGCAGACTCTGAAGCCGGAGAGCTGCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR TCA 90 bp AGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGCCGAGATCATCACTTCCTTGGTaGAGCCATATCGTAAGTTCA +
Preference number: 4 (lower is better)
Translates to: RRLRQENRLGGGLCGEPRSSLPW*SHIVSS
Trigger: TGAACTTACGATATGGCTTCACCAAGGAAGTGATGA...TCTCGGCTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286719.12
ENST00000511880.7
CDS-3UTR TCA 90 bp TCCGCAGCTCTCCGGCTTCAGAGTCTGCTTCTGAGGCTGAGCGGGAGGGCTCCTTCATCACTTCCTTGGTaGAGCCATATCGTAAGTTCA +
Preference number: 4 (lower is better)
Translates to: SAALRLQSLLLRLSGRAPSSLPW*SHIVSS
Trigger: TGAACTTACGATATGGCTTCACCAAGGAAGTGATGA...AGGAGCCCTCCCGCTCAGCCTCAGAAGCAGACTCTGAAGCCGGAGAGCTGCGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR TCA 90 bp AGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGCCGAGAAGGTTTGCATTCATGTaGACGGATCAGGAATTGCAT +
Preference number: 4 (lower is better)
Translates to: RRLRQENRLGGGLCGEPRRFAFM*TDQELH
Trigger: ATGCAATTCCTGATCCGTTCACATGAATGCAAACCT...TCTCGGCTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286719.12
ENST00000511880.7
ENST00000652700.1
CDS-3UTR TCA 90 bp CTACTCAGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGAGAAGATCTGAAGAATaGGCAAACAGCTTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: LLRRLRQENRLGGGLCGERRSEE*ANSFSL
Trigger: GAGGGAGAAGCTGTTTGCTCATTCTTCAGATCTTCT...CTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCTGAGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286719.12
ENST00000511880.7
ENST00000652700.1
CDS-3UTR TCA 90 bp AGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGCCGAGATGTTTCCAGCAAACTTaGTTGTATGTTCTCGCGACT +
Preference number: 4 (lower is better)
Translates to: RRLRQENRLGGGLCGEPRCFQQT*LYVLAT
Trigger: AGTCGCGAGAACATACAATCAAGTTTGCTGGAAACA...TCTCGGCTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286719.12
ENST00000511880.7
ENST00000652700.1
CDS-3UTR TCA 90 bp CTACTCAGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGTGTGGCCATCTTTGTTaGAATCAATGCTCCGAGCAA +
Preference number: 4 (lower is better)
Translates to: LLRRLRQENRLGGGLCGECGHLC*NQCSEQ
Trigger: TTGCTCGGAGCATTGATTTCAACAAAGATGGCCACA...CTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCTGAGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286719.12
ENST00000511880.7
ENST00000652700.1
CDS-3UTR GCA 90 bp CTACTCAGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGGAAATCTCTTTAACATaGAGGCGTGATCCCCATCCT +
Preference number: 4 (lower is better)
Translates to: LLRRLRQENRLGGGLCGEEISLT*RRDPHP
Trigger: AGGATGGGGATCACGCCTGCATGTTAAAGAGATTTC...CTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCTGAGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286719.12
ENST00000511880.7
CDS-3UTR GCA 90 bp AGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGCCGAGATTGACTTGGTCTTGCTaGCCAGCATATTCTATAGAC +
Preference number: 4 (lower is better)
Translates to: RRLRQENRLGGGLCGEPRLTWSC*PAYSID
Trigger: GTCTATAGAATATGCTGGGCAGCAAGACCAAGTCAA...TCTCGGCTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286719.12
ENST00000511880.7
CDS-3UTR GCA 90 bp AGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGCCGAGAAGCTTGACTTGGTCTTaGTGCCCAGCATATTCTATA +
Preference number: 4 (lower is better)
Translates to: RRLRQENRLGGGLCGEPRSLTWS*CPAYSI
Trigger: TATAGAATATGCTGGGCAGCAAGACCAAGTCAAGCT...TCTCGGCTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286719.12
ENST00000511880.7
CDS-3UTR GCA 90 bp AGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGCCGAGACATAGCCTTCAGGTTTaGATTCATGTGAACGGATCA +
Preference number: 4 (lower is better)
Translates to: RRLRQENRLGGGLCGEPRHSLQV*IHVNGS
Trigger: TGATCCGTTCACATGAATGCAAACCTGAAGGCTATG...TCTCGGCTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286719.12
ENST00000511880.7
ENST00000652700.1
CDS-3UTR CCA 90 bp CTACTCAGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGAATACAAAATTAGCCTaGTGTGGTGGTGCATGCCTG +
Preference number: 4 (lower is better)
Translates to: LLRRLRQENRLGGGLCGENTKLA*CGGACL
Trigger: CAGGCATGCACCACCACACCAGGCTAATTTTGTATT...CTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCTGAGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286719.12
ENST00000511880.7
ENST00000652700.1
CDS-3UTR CCA 90 bp TCCGCAGCTCTCCGGCTTCAGAGTCTGCTTCTGAGGCTGAGCGGGAGGGCTCCTTTTTGCACCTCATGGTaGAAACTATCTCATGATCCG +
Preference number: 4 (lower is better)
Translates to: SAALRLQSLLLRLSGRAPFCTSW*KLSHDP
Trigger: CGGATCATGAGATAGTTTCCACCATGAGGTGCAAAA...AGGAGCCCTCCCGCTCAGCCTCAGAAGCAGACTCTGAAGCCGGAGAGCTGCGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR TCA 90 bp CTACTCAGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGTCTGACACCCCACCATaGAGAATTAGAACTTTCTCA +
Preference number: 4 (lower is better)
Translates to: LLRRLRQENRLGGGLCGESDTPP*RIRTFS
Trigger: TGAGAAAGTTCTAATTCTTCATGGTGGGGTGTCAGA...CTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCTGAGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286719.12
ENST00000511880.7
CDS-3UTR TCA 90 bp AGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGCCGAGATTCACTGAGAAGATCTaGAGAATGAGCAAACAGCTT +
Preference number: 4 (lower is better)
Translates to: RRLRQENRLGGGLCGEPRFTEKI*RMSKQL
Trigger: AAGCTGTTTGCTCATTCTTCAGATCTTCTCAGTGAA...TCTCGGCTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286719.12
ENST00000511880.7
ENST00000652700.1
CDS-3UTR TCA 90 bp TCCGCAGCTCTCCGGCTTCAGAGTCTGCTTCTGAGGCTGAGCGGGAGGGCTCCTTTCACTGAGAAGATCTaGAGAATGAGCAAACAGCTT +
Preference number: 4 (lower is better)
Translates to: SAALRLQSLLLRLSGRAPFTEKI*RMSKQL
Trigger: AAGCTGTTTGCTCATTCTTCAGATCTTCTCAGTGAA...AGGAGCCCTCCCGCTCAGCCTCAGAAGCAGACTCTGAAGCCGGAGAGCTGCGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR TCA 90 bp CTACTCAGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGGAGATGAACCCTGAATaGTCACTGTCTATGATCCTA +
Preference number: 4 (lower is better)
Translates to: LLRRLRQENRLGGGLCGEEMNPE*SLSMIL
Trigger: TAGGATCATAGACAGTGATCATTCAGGGTTCATCTC...CTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCTGAGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286719.12
ENST00000511880.7
ENST00000652700.1
CDS-3UTR GCA 90 bp AGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGCCGAGATGGATTCATAGTCACTaGATTTCTTCATCTCGGAGT +
Preference number: 4 (lower is better)
Translates to: RRLRQENRLGGGLCGEPRWIHSH*ISSSRS
Trigger: ACTCCGAGATGAAGAAATGCAGTGACTATGAATCCA...TCTCGGCTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286719.12
ENST00000511880.7
CDS-3UTR GCA 90 bp CTACTCAGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGCATAGCCTTCAGGTTTaGATTCATGTGAACGGATCA +
Preference number: 4 (lower is better)
Translates to: LLRRLRQENRLGGGLCGEHSLQV*IHVNGS
Trigger: TGATCCGTTCACATGAATGCAAACCTGAAGGCTATG...CTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCTGAGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286719.12
ENST00000511880.7
ENST00000652700.1
CDS-3UTR CCA 90 bp GCTGGTTTTCTGGGCCTTGTAGGAGCCAAGCCGAAGGGGCGAAGAGGGAAGAGAGACCCGGTTGATGTTTaGCAGCTGTACCAGATGTTT +
Preference number: 4 (lower is better)
Translates to: AGFLGLVGAKPKGRRGKRDPVDV*QLYQMF
Trigger: AAACATCTGGTACAGCTGCCAAACATCAACCGGGTC...TCTCTTCCCTCTTCGCCCCTTCGGCTTGGCTCCTACAAGGCCCAGAAAACCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR CCA 90 bp CTACTCAGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGTTTTGCACCTCATGGTaGAAACTATCTTGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: LLRRLRQENRLGGGLCGEFCTSW*KLSCSS
Trigger: AGAGGAGCAAGATAGTTTCCACCATGAGGTGCAAAA...CTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCTGAGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286719.12
CDS-3UTR CCA 90 bp ACAGCCTCCTCCTCGAATAGTGTTGGCCTTGCAGCCCTCTTGAGCCATGGGATCTGTGCAGAGCTCTTCTaGTTGGCTCTTCTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: TASSSNSVGLAALLSHGICAELF*LALLFS
Trigger: GGAGAAGAGAAGAGCCAACCAGAAGAGCTCTGCACA...GATCCCATGGCTCAAGAGGGCTGCAAGGCCAACACTATTCGAGGAGGAGGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR CCA 90 bp ACAGCCTCCTCCTCGAATAGTGTTGGCCTTGCAGCCCTCTTGAGCCATGGGATCAGCCCTCTTGAGCCATaGGATCACTCCACAGGATAT +
Preference number: 4 (lower is better)
Translates to: TASSSNSVGLAALLSHGISPLEP*DHSTGY
Trigger: ATATCCTGTGGAGTGATCCCATGGCTCAAGAGGGCT...GATCCCATGGCTCAAGAGGGCTGCAAGGCCAACACTATTCGAGGAGGAGGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR CCA 90 bp TCCGCAGCTCTCCGGCTTCAGAGTCTGCTTCTGAGGCTGAGCGGGAGGGCTCCTAAATGGTCTCTAGGTTaGATCGGTTTCGATACAATG +
Preference number: 4 (lower is better)
Translates to: SAALRLQSLLLRLSGRAPKWSLG*IGFDTM
Trigger: CATTGTATCGAAACCGATCCAACCTAGAGACCATTT...AGGAGCCCTCCCGCTCAGCCTCAGAAGCAGACTCTGAAGCCGGAGAGCTGCGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR CCA 90 bp CTACTCAGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGATTGTGAGGTGGGGTTaGGGCACTCATATACTTAAA +
Preference number: 4 (lower is better)
Translates to: LLRRLRQENRLGGGLCGEIVRWG*GTHILK
Trigger: TTTAAGTATATGAGTGCCCCAACCCCACCTCACAAT...CTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCTGAGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286719.12
ENST00000511880.7
ENST00000652700.1
CDS-3UTR CCA 90 bp TCCGCAGCTCTCCGGCTTCAGAGTCTGCTTCTGAGGCTGAGCGGGAGGGCTCCTGAGTTACATTGTCAGTaGTTCTTAACTGAAGTGGAC +
Preference number: 4 (lower is better)
Translates to: SAALRLQSLLLRLSGRAPELHCQ*FLTEVD
Trigger: GTCCACTTCAGTTAAGAACCACTGACAATGTAACTC...AGGAGCCCTCCCGCTCAGCCTCAGAAGCAGACTCTGAAGCCGGAGAGCTGCGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR CCA 90 bp AGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGCCGAGATCGTTTTGCACCTCATaGTGGAAACTATCTCATGAT +
Preference number: 4 (lower is better)
Translates to: RRLRQENRLGGGLCGEPRSFCTS*WKLSHD
Trigger: ATCATGAGATAGTTTCCACCATGAGGTGCAAAACGA...TCTCGGCTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR CAA 72 bp GCCTCCTCCTCGAATAGTGTTGGCCTTGCAGCCCTCTaGAGCCATGGGATCACTCCACAGGATATCTACAAC +
Preference number: 4 (lower is better)
Translates to: ASSSNSVGLAAL*SHGITPQDIYN
Trigger: GTTGTAGATATCCTGTGGAGTGATCCCATGGCTCAAGAGGGCTGCAAGGCCAACACTATTCGAGGAGGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR TCA 90 bp CTACTCAGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGTTCACTGAGAAGATCTaGAGAATGAGCAAACAGCTT +
Preference number: 4 (lower is better)
Translates to: LLRRLRQENRLGGGLCGEFTEKI*RMSKQL
Trigger: AAGCTGTTTGCTCATTCTTCAGATCTTCTCAGTGAA...CTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCTGAGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286719.12
ENST00000511880.7
ENST00000652700.1
CDS-3UTR TCA 90 bp CCTGCTGGTTTTCTGGGCCTTGTAGGAGCCAAGCCGAAGGGGCGAAGAGGGAAGGAGATGAACCCTGAATaGTCACTGTCTATGATCCTA +
Preference number: 4 (lower is better)
Translates to: PAGFLGLVGAKPKGRRGKEMNPE*SLSMIL
Trigger: TAGGATCATAGACAGTGATCATTCAGGGTTCATCTC...CTTCCCTCTTCGCCCCTTCGGCTTGGCTCCTACAAGGCCCAGAAAACCAGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR TCA 90 bp ACAGCCTCCTCCTCGAATAGTGTTGGCCTTGCAGCCCTCTTGAGCCATGGGATCCCCAGTCACTCAAGGTaGTTAAACCTACAGGTGAGA +
Preference number: 4 (lower is better)
Translates to: TASSSNSVGLAALLSHGIPSHSR*LNLQVR
Trigger: TCTCACCTGTAGGTTTAATCACCTTGAGTGACTGGG...GATCCCATGGCTCAAGAGGGCTGCAAGGCCAACACTATTCGAGGAGGAGGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR GCA 90 bp CCTGCTGGTTTTCTGGGCCTTGTAGGAGCCAAGCCGAAGGGGCGAAGAGGGAAGTTGACTTGGTCTTGCTaGCCAGCATATTCTATAGAC +
Preference number: 4 (lower is better)
Translates to: PAGFLGLVGAKPKGRRGKLTWSC*PAYSID
Trigger: GTCTATAGAATATGCTGGGCAGCAAGACCAAGTCAA...CTTCCCTCTTCGCCCCTTCGGCTTGGCTCCTACAAGGCCCAGAAAACCAGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR GCA 90 bp TTAGTGTGCACCTGGACTGCTGCAGCCACTGTCTTTAGCATTTGTAGCTTGTGGAACCGCTGCAGGGGATaGTGGAGGACCTGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: LVCTWTAAATVFSICSLWNRCRG*WRTCWF
Trigger: AAACCAGCAGGTCCTCCAGCATCCCCTGCAGCGGTT...CCACAAGCTACAAATGCTAAAGACAGTGGCTGCAGCAGTCCAGGTGCACACTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR GCA 90 bp ATCTGTAATGTCGATATTCATGTGAGAGCTGAACAGCTTCCAGGTCTGCCTGAAACCAGGAGGCCTGCTTaGTGCCGGCACCGCTCTAGC +
Preference number: 4 (lower is better)
Translates to: ICNVDIHVRAEQLPGLPETRRPA*CRHRSS
Trigger: GCTAGAGCGGTGCCGGCAGCAAGCAGGCCTCCTGGT...TTCAGGCAGACCTGGAAGCTGTTCAGCTCTCACATGAATATCGACATTACAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR GCA 90 bp AGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGCCGAGAGAACGGATCAGGAATTaGATGTTGTATTTTTGTAGC +
Preference number: 4 (lower is better)
Translates to: RRLRQENRLGGGLCGEPRERIRN*MLYFCS
Trigger: GCTACAAAAATACAACATGCAATTCCTGATCCGTTC...TCTCGGCTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286719.12
ENST00000511880.7
CDS-3UTR GCA 90 bp AGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGCCGAGACAGTCCGACTTTATCTaGATCATGCTTCTTAAATTC +
Preference number: 4 (lower is better)
Translates to: RRLRQENRLGGGLCGEPRQSDFI*IMLLKF
Trigger: GAATTTAAGAAGCATGATGCAGATAAAGTCGGACTG...TCTCGGCTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652700.1
CDS-3UTR CCA 90 bp ACAGCCTCCTCCTCGAATAGTGTTGGCCTTGCAGCCCTCTTGAGCCATGGGATCTCTCATCTATCAGAGTaGCCAGTGGAAGCCAACAGA +
Preference number: 4 (lower is better)
Translates to: TASSSNSVGLAALLSHGISHLSE*PVEANR
Trigger: TCTGTTGGCTTCCACTGGCCACTCTGATAGATGAGA...GATCCCATGGCTCAAGAGGGCTGCAAGGCCAACACTATTCGAGGAGGAGGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR CCA 90 bp AAAATAACAGCCTCCTCCTCGAATAGTGTTGGCCTTGCAGCCCTCTTGAGCCATATGTGGGGTCAGGGCTaGCCCCAGTTTGACATAGGC +
Preference number: 4 (lower is better)
Translates to: KITASSSNSVGLAALLSHMWGQG*PQFDIG
Trigger: GCCTATGTCAAACTGGGGCCAGCCCTGACCCCACAT...ATGGCTCAAGAGGGCTGCAAGGCCAACACTATTCGAGGAGGAGGCTGTTATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR CCA 90 bp CTACTCAGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGAAATGGTCTCTAGGTTaGATCGGTTTCGATACAATG +
Preference number: 4 (lower is better)
Translates to: LLRRLRQENRLGGGLCGEKWSLG*IGFDTM
Trigger: CATTGTATCGAAACCGATCCAACCTAGAGACCATTT...CTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCTGAGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286719.12
ENST00000511880.7
ENST00000652700.1
CDS-3UTR TCA 90 bp ATCTGTAATGTCGATATTCATGTGAGAGCTGAACAGCTTCCAGGTCTGCCTGAAGGGCTGGCCCCAGTTTaGCATAGGCCCCTCTGTTGC +
Preference number: 4 (lower is better)
Translates to: ICNVDIHVRAEQLPGLPEGLAPV*HRPLCC
Trigger: GCAACAGAGGGGCCTATGTCAAACTGGGGCCAGCCC...TTCAGGCAGACCTGGAAGCTGTTCAGCTCTCACATGAATATCGACATTACAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR GCA 90 bp CTACTCAGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGCAACAGAAAACATCTTaGAGGGTTCTTAGTATTTCC +
Preference number: 4 (lower is better)
Translates to: LLRRLRQENRLGGGLCGEQQKTS*RVLSIS
Trigger: GGAAATACTAAGAACCCTGCAAGATGTTTTCTGTTG...CTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCTGAGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286719.12
ENST00000511880.7
CDS-3UTR GCA 90 bp AGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGCCGAGAAGATTGTTAATACCTTaGGGTTGTGACAGAATTCAT +
Preference number: 4 (lower is better)
Translates to: RRLRQENRLGGGLCGEPRRLLIP*GCDRIH
Trigger: ATGAATTCTGTCACAACCGCAAGGTATTAACAATCT...TCTCGGCTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286719.12
ENST00000511880.7
ENST00000652700.1
CDS-3UTR CCA 90 bp AGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGCCGAGAGTACCAGATGTTTCTTaGTTTCATACAAAAGGTTCA +
Preference number: 4 (lower is better)
Translates to: RRLRQENRLGGGLCGEPRVPDVS*FHTKGS
Trigger: TGAACCTTTTGTATGAAACCAAGAAACATCTGGTAC...TCTCGGCTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286719.12
ENST00000511880.7
CDS-3UTR CCA 90 bp AGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGCCGAGACAACTTCATAGTAGTTaGAGGCAGAAAAGATTGTTA +
Preference number: 4 (lower is better)
Translates to: RRLRQENRLGGGLCGEPRQLHSS*RQKRLL
Trigger: TAACAATCTTTTCTGCCTCCAACTACTATGAAGTTG...TCTCGGCTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286719.12
ENST00000511880.7
ENST00000652700.1
CDS-3UTR CCA 90 bp TTAGTGTGCACCTGGACTGCTGCAGCCACTGTCTTTAGCATTTGTAGCTTGTGGATACTGCACAATATGTaGGGTCAGGGCTGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: LVCTWTAAATVFSICSLWILHNM*GQGWPQ
Trigger: CTGGGGCCAGCCCTGACCCCACATATTGTGCAGTAT...CCACAAGCTACAAATGCTAAAGACAGTGGCTGCAGCAGTCCAGGTGCACACTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR GCA 90 bp CCTGCTGGTTTTCTGGGCCTTGTAGGAGCCAAGCCGAAGGGGCGAAGAGGGAAGGAACGGATCAGGAATTaGATGTTGTATTTTTGTAGC +
Preference number: 4 (lower is better)
Translates to: PAGFLGLVGAKPKGRRGKERIRN*MLYFCS
Trigger: GCTACAAAAATACAACATGCAATTCCTGATCCGTTC...CTTCCCTCTTCGCCCCTTCGGCTTGGCTCCTACAAGGCCCAGAAAACCAGCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR GCA 90 bp CTACTCAGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGAGATTGTTAATACCTTaGGGTTGTGACAGAATTCAT +
Preference number: 4 (lower is better)
Translates to: LLRRLRQENRLGGGLCGERLLIP*GCDRIH
Trigger: ATGAATTCTGTCACAACCGCAAGGTATTAACAATCT...CTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCTGAGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286719.12
ENST00000511880.7
ENST00000652700.1
CDS-3UTR GCA 90 bp AAAATAACAGCCTCCTCCTCGAATAGTGTTGGCCTTGCAGCCCTCTTGAGCCATCTCCGACTCTCAGAGTaGTGGGATTACAGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: KITASSSNSVGLAALLSHLRLSE*WDYRCE
Trigger: CTCACACCTGTAATCCCAGCACTCTGAGAGTCGGAG...ATGGCTCAAGAGGGCTGCAAGGCCAACACTATTCGAGGAGGAGGCTGTTATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR CCA 90 bp CTACTCAGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGCAACTTCATAGTAGTTaGAGGCAGAAAAGATTGTTA +
Preference number: 4 (lower is better)
Translates to: LLRRLRQENRLGGGLCGEQLHSS*RQKRLL
Trigger: TAACAATCTTTTCTGCCTCCAACTACTATGAAGTTG...CTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCTGAGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286719.12
ENST00000511880.7
ENST00000652700.1
CDS-3UTR CCA 90 bp AAAATAACAGCCTCCTCCTCGAATAGTGTTGGCCTTGCAGCCCTCTTGAGCCATTTCTTAGTGTGCACCTaGACTGCTGCAGCCACTGTC +
Preference number: 4 (lower is better)
Translates to: KITASSSNSVGLAALLSHFLVCT*TAAATV
Trigger: GACAGTGGCTGCAGCAGTCCAGGTGCACACTAAGAA...ATGGCTCAAGAGGGCTGCAAGGCCAACACTATTCGAGGAGGAGGCTGTTATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR CCA 90 bp AAAATAACAGCCTCCTCCTCGAATAGTGTTGGCCTTGCAGCCCTCTTGAGCCATGCCTATGAGGCACTTTaGGTGATGAAGACCAGGCTG +
Preference number: 4 (lower is better)
Translates to: KITASSSNSVGLAALLSHAYEAL*VMKTRL
Trigger: CAGCCTGGTCTTCATCACCCAAAGTGCCTCATAGGC...ATGGCTCAAGAGGGCTGCAAGGCCAACACTATTCGAGGAGGAGGCTGTTATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR TCA 90 bp AAAATAACAGCCTCCTCCTCGAATAGTGTTGGCCTTGCAGCCCTCTTGAGCCATAGTCTCCACACACTGTaGTCTCCTCACTGTAACAGG +
Preference number: 4 (lower is better)
Translates to: KITASSSNSVGLAALLSHSLHTL*SPHCNR
Trigger: CCTGTTACAGTGAGGAGATCACAGTGTGTGGAGACT...ATGGCTCAAGAGGGCTGCAAGGCCAACACTATTCGAGGAGGAGGCTGTTATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR CCA 90 bp TTAGTGTGCACCTGGACTGCTGCAGCCACTGTCTTTAGCATTTGTAGCTTGTGGCAGAGCTCTTCTGGTTaGCTCTTCTCTTCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: LVCTWTAAATVFSICSLWQSSSG*LFSSPP
Trigger: TGGAGGAGAAGAGAAGAGCCAACCAGAAGAGCTCTG...CCACAAGCTACAAATGCTAAAGACAGTGGCTGCAGCAGTCCAGGTGCACACTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR GCA 90 bp ATTTTCAGCATAAAGTTTCACATGGAGAATAAGGGAGATAGTCTAGTGAGAAGCCGTCCAGGGAACCGCTaGAGGGGATGCTGGAGGACC +
Preference number: 4 (lower is better)
Translates to: IFSIKFHMENKGDSLVRSRPGNR*RGCWRT
Trigger: GGTCCTCCAGCATCCCCTGCAGCGGTTCCCTGGACG...GCTTCTCACTAGACTATCTCCCTTATTCTCCATGTGAAACTTTATGCTGAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286719.12
ENST00000511880.7
CDS-3UTR GCA 90 bp ATTTTCAGCATAAAGTTTCACATGGAGAATAAGGGAGATAGTCTAGTGAGAAGCAGGAGGCCTGCTTGCTaGCGGCACCGCTCTAGCTCC +
Preference number: 4 (lower is better)
Translates to: IFSIKFHMENKGDSLVRSRRPAC*RHRSSS
Trigger: GGAGCTAGAGCGGTGCCGGCAGCAAGCAGGCCTCCT...GCTTCTCACTAGACTATCTCCCTTATTCTCCATGTGAAACTTTATGCTGAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286719.12
ENST00000511880.7
CDS-3UTR GCA 90 bp TGGATCGGTTTCGATACAATGTTTCCAGCAAACTTGATTGTATGTTCTCGCGACCACAGACTCCACCGCTaGTGCCCAGTCACTCAAGGT +
Preference number: 4 (lower is better)
Translates to: WIGFDTMFPANLIVCSRDHRLHR*CPVTQG
Trigger: ACCTTGAGTGACTGGGCAGCAGCGGTGGAGTCTGTG...GTCGCGAGAACATACAATCAAGTTTGCTGGAAACATTGTATCGAAACCGATCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR GCA 90 bp ACAGCCTCCTCCTCGAATAGTGTTGGCCTTGCAGCCCTCTTGAGCCATGGGATCTTCATAGAACCAAACTaGCATTTCAGCCAACAATTG +
Preference number: 4 (lower is better)
Translates to: TASSSNSVGLAALLSHGIFIEPN*HFSQQL
Trigger: CAATTGTTGGCTGAAATGGCAGTTTGGTTCTATGAA...GATCCCATGGCTCAAGAGGGCTGCAAGGCCAACACTATTCGAGGAGGAGGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR GCA 90 bp TGGATCGGTTTCGATACAATGTTTCCAGCAAACTTGATTGTATGTTCTCGCGACCTGAGGCTGGAGGATTaGCTCAGCCCAGGAGGTCAA +
Preference number: 4 (lower is better)
Translates to: WIGFDTMFPANLIVCSRDLRLED*LSPGGQ
Trigger: TTGACCTCCTGGGCTGAGGCAATCCTCCAGCCTCAG...GTCGCGAGAACATACAATCAAGTTTGCTGGAAACATTGTATCGAAACCGATCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR CCA 90 bp AAAATAACAGCCTCCTCCTCGAATAGTGTTGGCCTTGCAGCCCTCTTGAGCCATGTGAAGATTGTGAGGTaGGGTTGGGGCACTCATATA +
Preference number: 4 (lower is better)
Translates to: KITASSSNSVGLAALLSHVKIVR*GWGTHI
Trigger: TATATGAGTGCCCCAACCCCACCTCACAATCTTCAC...ATGGCTCAAGAGGGCTGCAAGGCCAACACTATTCGAGGAGGAGGCTGTTATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR CCA 90 bp TTAGTGTGCACCTGGACTGCTGCAGCCACTGTCTTTAGCATTTGTAGCTTGTGGAGTAGCAGAGTTGGCTaGAAGCTAGGCCGACTTTAT +
Preference number: 4 (lower is better)
Translates to: LVCTWTAAATVFSICSLWSSRVG*KLGRLY
Trigger: ATAAAGTCGGCCTAGCTTCCAGCCAACTCTGCTACT...CCACAAGCTACAAATGCTAAAGACAGTGGCTGCAGCAGTCCAGGTGCACACTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR TCA 90 bp ATTTTCAGCATAAAGTTTCACATGGAGAATAAGGGAGATAGTCTAGTGAGAAGCGGGCTGGCCCCAGTTTaGCATAGGCCCCTCTGTTGC +
Preference number: 4 (lower is better)
Translates to: IFSIKFHMENKGDSLVRSGLAPV*HRPLCC
Trigger: GCAACAGAGGGGCCTATGTCAAACTGGGGCCAGCCC...GCTTCTCACTAGACTATCTCCCTTATTCTCCATGTGAAACTTTATGCTGAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286719.12
ENST00000511880.7
ENST00000652700.1
CDS-3UTR TCA 90 bp AAAATAACAGCCTCCTCCTCGAATAGTGTTGGCCTTGCAGCCCTCTTGAGCCATTGTGGCCATCTTTGTTaGAATCAATGCTCCGAGCAA +
Preference number: 4 (lower is better)
Translates to: KITASSSNSVGLAALLSHCGHLC*NQCSEQ
Trigger: TTGCTCGGAGCATTGATTTCAACAAAGATGGCCACA...ATGGCTCAAGAGGGCTGCAAGGCCAACACTATTCGAGGAGGAGGCTGTTATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR TCA 90 bp AAAATAACAGCCTCCTCCTCGAATAGTGTTGGCCTTGCAGCCCTCTTGAGCCATAGAATTGCCCAAAGCTaGAGTAGACTGATTGTTCCC +
Preference number: 4 (lower is better)
Translates to: KITASSSNSVGLAALLSHRIAQS*SRLIVP
Trigger: GGGAACAATCAGTCTACTTCAGCTTTGGGCAATTCT...ATGGCTCAAGAGGGCTGCAAGGCCAACACTATTCGAGGAGGAGGCTGTTATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR GCA 90 bp TGGATCGGTTTCGATACAATGTTTCCAGCAAACTTGATTGTATGTTCTCGCGACTCTCTGGATCAGGGCTaGTGCCTTGAAGGCTCTCTC +
Preference number: 4 (lower is better)
Translates to: WIGFDTMFPANLIVCSRDSLDQG*CLEGSL
Trigger: GAGAGAGCCTTCAAGGCAGCAGCCCTGATCCAGAGA...GTCGCGAGAACATACAATCAAGTTTGCTGGAAACATTGTATCGAAACCGATCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR CCA 90 bp TTAGTGTGCACCTGGACTGCTGCAGCCACTGTCTTTAGCATTTGTAGCTTGTGGTATCAGAGTGGCCAGTaGAAGCCAACAGAAAACATC +
Preference number: 4 (lower is better)
Translates to: LVCTWTAAATVFSICSLWYQSGQ*KPTENI
Trigger: GATGTTTTCTGTTGGCTTCCACTGGCCACTCTGATA...CCACAAGCTACAAATGCTAAAGACAGTGGCTGCAGCAGTCCAGGTGCACACTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR TCA 90 bp AAAATAACAGCCTCCTCCTCGAATAGTGTTGGCCTTGCAGCCCTCTTGAGCCATTGTTTCCAGCAAACTTaGTTGTATGTTCTCGCGACT +
Preference number: 4 (lower is better)
Translates to: KITASSSNSVGLAALLSHCFQQT*LYVLAT
Trigger: AGTCGCGAGAACATACAATCAAGTTTGCTGGAAACA...ATGGCTCAAGAGGGCTGCAAGGCCAACACTATTCGAGGAGGAGGCTGTTATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR TCA 90 bp ATTTTCAGCATAAAGTTTCACATGGAGAATAAGGGAGATAGTCTAGTGAGAAGCAGCTTGTGGGCATTCTaGGGCATCGCCCTCTGGGCA +
Preference number: 4 (lower is better)
Translates to: IFSIKFHMENKGDSLVRSSLWAF*GIALWA
Trigger: TGCCCAGAGGGCGATGCCTCAGAATGCCCACAAGCT...GCTTCTCACTAGACTATCTCCCTTATTCTCCATGTGAAACTTTATGCTGAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286719.12
ENST00000511880.7
ENST00000652700.1
CDS-3UTR TCA 90 bp ATTTTCAGCATAAAGTTTCACATGGAGAATAAGGGAGATAGTCTAGTGAGAAGCAGCTACTCAGGAGGCTaGGGCAGGAGAATCGCCTGG +
Preference number: 4 (lower is better)
Translates to: IFSIKFHMENKGDSLVRSSYSGG*GRRIAW
Trigger: CCAGGCGATTCTCCTGCCTCAGCCTCCTGAGTAGCT...GCTTCTCACTAGACTATCTCCCTTATTCTCCATGTGAAACTTTATGCTGAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286719.12
ENST00000511880.7
ENST00000652700.1
CDS-3UTR CCA 90 bp ATTTTCAGCATAAAGTTTCACATGGAGAATAAGGGAGATAGTCTAGTGAGAAGCCGCCGGTACCATCTCTaGATCAGGGCTGCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: IFSIKFHMENKGDSLVRSRRYHL*IRAAAL
Trigger: CAAGGCAGCAGCCCTGATCCAGAGATGGTACCGGCG...GCTTCTCACTAGACTATCTCCCTTATTCTCCATGTGAAACTTTATGCTGAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286719.12
ENST00000511880.7
CDS-3UTR CCA 90 bp TCTAGGTTGGATCGGTTTCGATACAATGTTTCCAGCAAACTTGATTGTATGTTCACCAGGGCAGTTGCATaGTCAGGCAGGAGTGGGAAG +
Preference number: 4 (lower is better)
Translates to: SRLDRFRYNVSSKLDCMFTRAVA*SGRSGK
Trigger: CTTCCCACTCCTGCCTGACCATGCAACTGCCCTGGT...GAACATACAATCAAGTTTGCTGGAAACATTGTATCGAAACCGATCCAACCTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR TCA 90 bp ATTTTCAGCATAAAGTTTCACATGGAGAATAAGGGAGATAGTCTAGTGAGAAGCGGAGGGTGGATCACCTaGGGTTGGGAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: IFSIKFHMENKGDSLVRSGGWIT*GWEFKT
Trigger: GGTCTTGAACTCCCAACCTCAGGTGATCCACCCTCC...GCTTCTCACTAGACTATCTCCCTTATTCTCCATGTGAAACTTTATGCTGAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286719.12
ENST00000511880.7
ENST00000652700.1
CDS-3UTR GCA 90 bp ATTTTCAGCATAAAGTTTCACATGGAGAATAAGGGAGATAGTCTAGTGAGAAGCGGAAGATGCTCCAGGTaGAACGCCGCCTCATCTCCA +
Preference number: 4 (lower is better)
Translates to: IFSIKFHMENKGDSLVRSGRCSR*NAASSP
Trigger: TGGAGATGAGGCGGCGTTGCACCTGGAGCATCTTCC...GCTTCTCACTAGACTATCTCCCTTATTCTCCATGTGAAACTTTATGCTGAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286719.12
ENST00000511880.7
CDS-3UTR GCA 90 bp ATCTGTAATGTCGATATTCATGTGAGAGCTGAACAGCTTCCAGGTCTGCCTGAAACTCTGCTAATCCTTTaGCTCATGGTGAGTGTGTGG +
Preference number: 4 (lower is better)
Translates to: ICNVDIHVRAEQLPGLPETLLIL*LMVSVW
Trigger: CCACACACTCACCATGAGGCAAAGGATTAGCAGAGT...TTCAGGCAGACCTGGAAGCTGTTCAGCTCTCACATGAATATCGACATTACAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR GCA 90 bp ATTTTCAGCATAAAGTTTCACATGGAGAATAAGGGAGATAGTCTAGTGAGAAGCCACAGACTCCACCGCTaGTGCCCAGTCACTCAAGGT +
Preference number: 4 (lower is better)
Translates to: IFSIKFHMENKGDSLVRSHRLHR*CPVTQG
Trigger: ACCTTGAGTGACTGGGCAGCAGCGGTGGAGTCTGTG...GCTTCTCACTAGACTATCTCCCTTATTCTCCATGTGAAACTTTATGCTGAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286719.12
ENST00000511880.7
CDS-3UTR CCA 90 bp ATTTTCAGCATAAAGTTTCACATGGAGAATAAGGGAGATAGTCTAGTGAGAAGCATGTGGGGTCAGGGCTaGCCCCAGTTTGACATAGGC +
Preference number: 4 (lower is better)
Translates to: IFSIKFHMENKGDSLVRSMWGQG*PQFDIG
Trigger: GCCTATGTCAAACTGGGGCCAGCCCTGACCCCACAT...GCTTCTCACTAGACTATCTCCCTTATTCTCCATGTGAAACTTTATGCTGAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286719.12
ENST00000511880.7
ENST00000652700.1
3UTR CAA 72 bp AAACTTGATTGTATGTTCTCGCGACTCAGTTGTTCCTaGGCCAAGTTCTTCAGCCAAGACTTGTACTCCAGC +
Preference number: 4 (lower is better)
Translates to: KLDCMFSRLSCS*AKFFSQDLYSS
Trigger: GCTGGAGTACAAGTCTTGGCTGAAGAACTTGGCCAAGGAACAACTGAGTCGCGAGAACATACAATCAAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
3UTR CAA 72 bp GCCTCCAGGAACTCATTGATATCAATGTGGCCATCTTaGTTGAAATCAATGCTCCGAGCAAGGTCACAGATG +
Preference number: 4 (lower is better)
Translates to: ASRNSLISMWPS*LKSMLRARSQM
Trigger: CATCTGTGACCTTGCTCGGAGCATTGATTTCAACAAAGATGGCCACATTGATATCAATGAGTTCCTGGAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR TCA 90 bp ATTTTCAGCATAAAGTTTCACATGGAGAATAAGGGAGATAGTCTAGTGAGAAGCACCGTTGAACACATATaGCCGTTCTGGCGACGGGAG +
Preference number: 4 (lower is better)
Translates to: IFSIKFHMENKGDSLVRSTVEHI*PFWRRE
Trigger: CTCCCGTCGCCAGAACGGTCATATGTGTTCAACGGT...GCTTCTCACTAGACTATCTCCCTTATTCTCCATGTGAAACTTTATGCTGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286719.12
ENST00000511880.7
CDS-3UTR TCA 90 bp TGGATCGGTTTCGATACAATGTTTCCAGCAAACTTGATTGTATGTTCTCGCGACCCACAAAGTCACCGTTaGACACATATGACCGTTCTG +
Preference number: 4 (lower is better)
Translates to: WIGFDTMFPANLIVCSRDPQSHR*THMTVL
Trigger: CAGAACGGTCATATGTGTTCAACGGTGACTTTGTGG...GTCGCGAGAACATACAATCAAGTTTGCTGGAAACATTGTATCGAAACCGATCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR TCA 90 bp ATTTTCAGCATAAAGTTTCACATGGAGAATAAGGGAGATAGTCTAGTGAGAAGCCAGCATGTTGTCTGCTaGGCTGTTCACCAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: IFSIKFHMENKGDSLVRSQHVVC*AVHQLW
Trigger: CCACAGCTGGTGAACAGCTCAGCAGACAACATGCTG...GCTTCTCACTAGACTATCTCCCTTATTCTCCATGTGAAACTTTATGCTGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286719.12
ENST00000511880.7
ENST00000652700.1
CDS-3UTR GCA 90 bp ATTTTCAGCATAAAGTTTCACATGGAGAATAAGGGAGATAGTCTAGTGAGAAGCGGATGCTGGAGGACCTaGTGGTTTTCTGGGCCTTGT +
Preference number: 4 (lower is better)
Translates to: IFSIKFHMENKGDSLVRSGCWRT*WFSGPC
Trigger: ACAAGGCCCAGAAAACCAGCAGGTCCTCCAGCATCC...GCTTCTCACTAGACTATCTCCCTTATTCTCCATGTGAAACTTTATGCTGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286719.12
ENST00000511880.7
CDS-3UTR GCA 90 bp AAAATAACAGCCTCCTCCTCGAATAGTGTTGGCCTTGCAGCCCTCTTGAGCCATAGAAGTCTAGTTTCCTaGCCAATGGTGTGTATATTT +
Preference number: 4 (lower is better)
Translates to: KITASSSNSVGLAALLSHRSLVS*PMVCIF
Trigger: AAATATACACACCATTGGGCAGGAAACTAGACTTCT...ATGGCTCAAGAGGGCTGCAAGGCCAACACTATTCGAGGAGGAGGCTGTTATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR CCA 90 bp ATTTTCAGCATAAAGTTTCACATGGAGAATAAGGGAGATAGTCTAGTGAGAAGCTTCGGGGAGAAACCATaGGATGGGTCCCTGTGCAGA +
Preference number: 4 (lower is better)
Translates to: IFSIKFHMENKGDSLVRSFGEKP*DGSLCR
Trigger: TCTGCACAGGGACCCATCCCATGGTTTCTCCCCGAA...GCTTCTCACTAGACTATCTCCCTTATTCTCCATGTGAAACTTTATGCTGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286719.12
ENST00000511880.7
CDS-3UTR CCA 90 bp ATTTTCAGCATAAAGTTTCACATGGAGAATAAGGGAGATAGTCTAGTGAGAAGCTGCTGGAGGACCTGCTaGTTTTCTGGGCCTTGTAGG +
Preference number: 4 (lower is better)
Translates to: IFSIKFHMENKGDSLVRSCWRTC*FSGPCR
Trigger: CCTACAAGGCCCAGAAAACCAGCAGGTCCTCCAGCA...GCTTCTCACTAGACTATCTCCCTTATTCTCCATGTGAAACTTTATGCTGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286719.12
ENST00000511880.7
CDS-3UTR CCA 90 bp ATTTTCAGCATAAAGTTTCACATGGAGAATAAGGGAGATAGTCTAGTGAGAAGCATACTGCACAATATGTaGGGTCAGGGCTGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: IFSIKFHMENKGDSLVRSILHNM*GQGWPQ
Trigger: CTGGGGCCAGCCCTGACCCCACATATTGTGCAGTAT...GCTTCTCACTAGACTATCTCCCTTATTCTCCATGTGAAACTTTATGCTGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286719.12
ENST00000511880.7
ENST00000652700.1
3UTR CAA 72 bp TCCAGGAACTCATTGATATCAATGTGGCCATCTTTGTaGAAATCAATGCTCCGAGCAAGGTCACAGATGCAG +
Preference number: 4 (lower is better)
Translates to: SRNSLISMWPSL*KSMLRARSQMQ
Trigger: CTGCATCTGTGACCTTGCTCGGAGCATTGATTTCAACAAAGATGGCCACATTGATATCAATGAGTTCCTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR TCA 90 bp TCTAGGTTGGATCGGTTTCGATACAATGTTTCCAGCAAACTTGATTGTATGTTCCGAATCTGTCCTCAGTaGATATGCGGGTCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: SRLDRFRYNVSSKLDCMFRICPQ*ICGSGS
Trigger: ACTTCCTGACCCGCATATTCACTGAGGACAGATTCG...GAACATACAATCAAGTTTGCTGGAAACATTGTATCGAAACCGATCCAACCTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR TCA 90 bp ATTTTCAGCATAAAGTTTCACATGGAGAATAAGGGAGATAGTCTAGTGAGAAGCTCCTTTGCCTCATGGTaGGTGTGTGGGTCACCTTGT +
Preference number: 4 (lower is better)
Translates to: IFSIKFHMENKGDSLVRSSFASW*VCGSPC
Trigger: ACAAGGTGACCCACACACTCACCATGAGGCAAAGGA...GCTTCTCACTAGACTATCTCCCTTATTCTCCATGTGAAACTTTATGCTGAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286719.12
ENST00000511880.7
ENST00000652700.1
CDS-3UTR TCA 90 bp TGGATCGGTTTCGATACAATGTTTCCAGCAAACTTGATTGTATGTTCTCGCGACAGAAGATCTGAAGAATaGGCAAACAGCTTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: WIGFDTMFPANLIVCSRDRRSEE*ANSFSL
Trigger: GAGGGAGAAGCTGTTTGCTCATTCTTCAGATCTTCT...GTCGCGAGAACATACAATCAAGTTTGCTGGAAACATTGTATCGAAACCGATCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR TCA 90 bp TCTAGGTTGGATCGGTTTCGATACAATGTTTCCAGCAAACTTGATTGTATGTTCAGTCTAGTGAGAAGCTaGGCATTGCCTATGAGGCAC +
Preference number: 4 (lower is better)
Translates to: SRLDRFRYNVSSKLDCMFSLVRS*ALPMRH
Trigger: GTGCCTCATAGGCAATGCTCAGCTTCTCACTAGACT...GAACATACAATCAAGTTTGCTGGAAACATTGTATCGAAACCGATCCAACCTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR GCA 90 bp TCTAGGTTGGATCGGTTTCGATACAATGTTTCCAGCAAACTTGATTGTATGTTCGGTGCAGCCCTAGTCTaGCATGTCTTCTTCCTGAAA +
Preference number: 4 (lower is better)
Translates to: SRLDRFRYNVSSKLDCMFGAALV*HVFFLK
Trigger: TTTCAGGAAGAAGACATGGCAGACTAGGGCTGCACC...GAACATACAATCAAGTTTGCTGGAAACATTGTATCGAAACCGATCCAACCTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR GCA 90 bp TTTCCTTGCTCCTCTCTATTTTGTCCAAAAGCTCCAGATCAGTTATGTCTGACACATAGGCCCCTCTGTTaGTGCCAACTTCATAGTAGT +
Preference number: 4 (lower is better)
Translates to: FPCSSLFCPKAPDQLCLTHRPLC*CQLHSS
Trigger: ACTACTATGAAGTTGGCAGCAACAGAGGGGCCTATG...TGTCAGACATAACTGATCTGGAGCTTTTGGACAAAATAGAGAGGAGCAAGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR CCA 90 bp ATTTTCAGCATAAAGTTTCACATGGAGAATAAGGGAGATAGTCTAGTGAGAAGCTTCATCTCGGAGTCCTaGGCGAATCTGTCCTCAGTG +
Preference number: 4 (lower is better)
Translates to: IFSIKFHMENKGDSLVRSFISES*ANLSSV
Trigger: CACTGAGGACAGATTCGCCCAGGACTCCGAGATGAA...GCTTCTCACTAGACTATCTCCCTTATTCTCCATGTGAAACTTTATGCTGAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286719.12
ENST00000511880.7
CDS-3UTR TCA 90 bp ATTTTCAGCATAAAGTTTCACATGGAGAATAAGGGAGATAGTCTAGTGAGAAGCTTCTGGAAAGCAAAATaGTGTTGGGTGGAGGTGCCG +
Preference number: 4 (lower is better)
Translates to: IFSIKFHMENKGDSLVRSFWKAK*CWVEVP
Trigger: CGGCACCTCCACCCAACATCATTTTGCTTTCCAGAA...GCTTCTCACTAGACTATCTCCCTTATTCTCCATGTGAAACTTTATGCTGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286719.12
ENST00000511880.7
CDS-3UTR TCA 90 bp ATTTTCAGCATAAAGTTTCACATGGAGAATAAGGGAGATAGTCTAGTGAGAAGCTATTCATGTGAGAGCTaGACAGCTTCCAGGTCTGCC +
Preference number: 4 (lower is better)
Translates to: IFSIKFHMENKGDSLVRSYSCES*TASRSA
Trigger: GGCAGACCTGGAAGCTGTTCAGCTCTCACATGAATA...GCTTCTCACTAGACTATCTCCCTTATTCTCCATGTGAAACTTTATGCTGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286719.12
ENST00000511880.7
ENST00000652700.1
CDS-3UTR TCA 90 bp ATTTTCAGCATAAAGTTTCACATGGAGAATAAGGGAGATAGTCTAGTGAGAAGCGCTGAGCATTGCCTATaGGGCACTTTGGGTGATGAA +
Preference number: 4 (lower is better)
Translates to: IFSIKFHMENKGDSLVRSAEHCL*GTLGDE
Trigger: TTCATCACCCAAAGTGCCTCATAGGCAATGCTCAGC...GCTTCTCACTAGACTATCTCCCTTATTCTCCATGTGAAACTTTATGCTGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286719.12
ENST00000511880.7
ENST00000652700.1
CDS-3UTR TCA 90 bp ATTTTCAGCATAAAGTTTCACATGGAGAATAAGGGAGATAGTCTAGTGAGAAGCAGTCTAGTGAGAAGCTaGGCATTGCCTATGAGGCAC +
Preference number: 4 (lower is better)
Translates to: IFSIKFHMENKGDSLVRSSLVRS*ALPMRH
Trigger: GTGCCTCATAGGCAATGCTCAGCTTCTCACTAGACT...GCTTCTCACTAGACTATCTCCCTTATTCTCCATGTGAAACTTTATGCTGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286719.12
ENST00000511880.7
ENST00000652700.1
CDS-3UTR TCA 90 bp TCTAGGTTGGATCGGTTTCGATACAATGTTTCCAGCAAACTTGATTGTATGTTCGCTATTGTTTCAGTCTaGATGCTTCTACCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: SRLDRFRYNVSSKLDCMFAIVSV*MLLPGQ
Trigger: CTGCCCTGGTAGAAGCATTCAGACTGAAACAATAGC...GAACATACAATCAAGTTTGCTGGAAACATTGTATCGAAACCGATCCAACCTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR GCA 90 bp ATTTTCAGCATAAAGTTTCACATGGAGAATAAGGGAGATAGTCTAGTGAGAAGCGGTGCAGCCCTAGTCTaGCATGTCTTCTTCCTGAAA +
Preference number: 4 (lower is better)
Translates to: IFSIKFHMENKGDSLVRSGAALV*HVFFLK
Trigger: TTTCAGGAAGAAGACATGGCAGACTAGGGCTGCACC...GCTTCTCACTAGACTATCTCCCTTATTCTCCATGTGAAACTTTATGCTGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286719.12
ENST00000511880.7
CDS-3UTR GCA 90 bp ATTTTCAGCATAAAGTTTCACATGGAGAATAAGGGAGATAGTCTAGTGAGAAGCAGGCCCCTCTGTTGCTaGCAACTTCATAGTAGTTGG +
Preference number: 4 (lower is better)
Translates to: IFSIKFHMENKGDSLVRSRPLCC*QLHSSW
Trigger: CCAACTACTATGAAGTTGGCAGCAACAGAGGGGCCT...GCTTCTCACTAGACTATCTCCCTTATTCTCCATGTGAAACTTTATGCTGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286719.12
ENST00000511880.7
ENST00000652700.1
CDS-3UTR CCA 90 bp ATTTTCAGCATAAAGTTTCACATGGAGAATAAGGGAGATAGTCTAGTGAGAAGCTGTGCAGAGCTCTTCTaGTTGGCTCTTCTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: IFSIKFHMENKGDSLVRSCAELF*LALLFS
Trigger: GGAGAAGAGAAGAGCCAACCAGAAGAGCTCTGCACA...GCTTCTCACTAGACTATCTCCCTTATTCTCCATGTGAAACTTTATGCTGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286719.12
ENST00000511880.7
CDS-3UTR CCA 90 bp ATTTTCAGCATAAAGTTTCACATGGAGAATAAGGGAGATAGTCTAGTGAGAAGCAGCCCTCTTGAGCCATaGGATCACTCCACAGGATAT +
Preference number: 4 (lower is better)
Translates to: IFSIKFHMENKGDSLVRSSPLEP*DHSTGY
Trigger: ATATCCTGTGGAGTGATCCCATGGCTCAAGAGGGCT...GCTTCTCACTAGACTATCTCCCTTATTCTCCATGTGAAACTTTATGCTGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286719.12
ENST00000511880.7
CDS-3UTR CCA 90 bp TCTAGGTTGGATCGGTTTCGATACAATGTTTCCAGCAAACTTGATTGTATGTTCGACTCAGTTGTTCCTTaGCCAAGTTCTTCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: SRLDRFRYNVSSKLDCMFDSVVP*PSSSAK
Trigger: CTTGGCTGAAGAACTTGGCCAAGGAACAACTGAGTC...GAACATACAATCAAGTTTGCTGGAAACATTGTATCGAAACCGATCCAACCTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR CCA 90 bp TGGATCGGTTTCGATACAATGTTTCCAGCAAACTTGATTGTATGTTCTCGCGACATTGTGAGGTGGGGTTaGGGCACTCATATACTTAAA +
Preference number: 4 (lower is better)
Translates to: WIGFDTMFPANLIVCSRDIVRWG*GTHILK
Trigger: TTTAAGTATATGAGTGCCCCAACCCCACCTCACAAT...GTCGCGAGAACATACAATCAAGTTTGCTGGAAACATTGTATCGAAACCGATCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR CCA 90 bp ATCTGTAATGTCGATATTCATGTGAGAGCTGAACAGCTTCCAGGTCTGCCTGAAATTGTTCCCTGTCTTTaGAACTTCCCAGGAAAATGT +
Preference number: 4 (lower is better)
Translates to: ICNVDIHVRAEQLPGLPEIVPCL*NFPGKC
Trigger: ACATTTTCCTGGGAAGTTCCAAAGACAGGGAACAAT...TTCAGGCAGACCTGGAAGCTGTTCAGCTCTCACATGAATATCGACATTACAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR TCA 90 bp TCTAGGTTGGATCGGTTTCGATACAATGTTTCCAGCAAACTTGATTGTATGTTCGTCACCTTGTTAGCTTaGTACTGCACAATATGTGGG +
Preference number: 4 (lower is better)
Translates to: SRLDRFRYNVSSKLDCMFVTLLA*YCTICG
Trigger: CCCACATATTGTGCAGTATCAAGCTAACAAGGTGAC...GAACATACAATCAAGTTTGCTGGAAACATTGTATCGAAACCGATCCAACCTAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR GCA 90 bp TTTCCTTGCTCCTCTCTATTTTGTCCAAAAGCTCCAGATCAGTTATGTCTGACAAGCTTGACTTGGTCTTaGTGCCCAGCATATTCTATA +
Preference number: 4 (lower is better)
Translates to: FPCSSLFCPKAPDQLCLTSLTWS*CPAYSI
Trigger: TATAGAATATGCTGGGCAGCAAGACCAAGTCAAGCT...TGTCAGACATAACTGATCTGGAGCTTTTGGACAAAATAGAGAGGAGCAAGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR GCA 90 bp TGGATCGGTTTCGATACAATGTTTCCAGCAAACTTGATTGTATGTTCTCGCGACTGGATTCATAGTCACTaGATTTCTTCATCTCGGAGT +
Preference number: 4 (lower is better)
Translates to: WIGFDTMFPANLIVCSRDWIHSH*ISSSRS
Trigger: ACTCCGAGATGAAGAAATGCAGTGACTATGAATCCA...GTCGCGAGAACATACAATCAAGTTTGCTGGAAACATTGTATCGAAACCGATCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR GCA 90 bp ATCTGTAATGTCGATATTCATGTGAGAGCTGAACAGCTTCCAGGTCTGCCTGAACAACAGAAAACATCTTaGAGGGTTCTTAGTATTTCC +
Preference number: 4 (lower is better)
Translates to: ICNVDIHVRAEQLPGLPEQQKTS*RVLSIS
Trigger: GGAAATACTAAGAACCCTGCAAGATGTTTTCTGTTG...TTCAGGCAGACCTGGAAGCTGTTCAGCTCTCACATGAATATCGACATTACAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR GCA 90 bp TTTCCTTGCTCCTCTCTATTTTGTCCAAAAGCTCCAGATCAGTTATGTCTGACATCTTCTGTCTCGTTTTaGACCTCATGGTGGAAACTA +
Preference number: 4 (lower is better)
Translates to: FPCSSLFCPKAPDQLCLTSSVSF*TSWWKL
Trigger: TAGTTTCCACCATGAGGTGCAAAACGAGACAGAAGA...TGTCAGACATAACTGATCTGGAGCTTTTGGACAAAATAGAGAGGAGCAAGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR CCA 90 bp ATTTTCAGCATAAAGTTTCACATGGAGAATAAGGGAGATAGTCTAGTGAGAAGCGTGAAGATTGTGAGGTaGGGTTGGGGCACTCATATA +
Preference number: 4 (lower is better)
Translates to: IFSIKFHMENKGDSLVRSVKIVR*GWGTHI
Trigger: TATATGAGTGCCCCAACCCCACCTCACAATCTTCAC...GCTTCTCACTAGACTATCTCCCTTATTCTCCATGTGAAACTTTATGCTGAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286719.12
ENST00000511880.7
ENST00000652700.1
CDS-3UTR TCA 90 bp ATTTTCAGCATAAAGTTTCACATGGAGAATAAGGGAGATAGTCTAGTGAGAAGCGCCATGTCTTCTTCCTaGAAAGCAATGGTGACATTC +
Preference number: 4 (lower is better)
Translates to: IFSIKFHMENKGDSLVRSAMSSS*KAMVTF
Trigger: GAATGTCACCATTGCTTTTCAGGAAGAAGACATGGC...GCTTCTCACTAGACTATCTCCCTTATTCTCCATGTGAAACTTTATGCTGAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286719.12
CDS-3UTR TCA 90 bp ATTTTCAGCATAAAGTTTCACATGGAGAATAAGGGAGATAGTCTAGTGAGAAGCGTCACCTTGTTAGCTTaGTACTGCACAATATGTGGG +
Preference number: 4 (lower is better)
Translates to: IFSIKFHMENKGDSLVRSVTLLA*YCTICG
Trigger: CCCACATATTGTGCAGTATCAAGCTAACAAGGTGAC...GCTTCTCACTAGACTATCTCCCTTATTCTCCATGTGAAACTTTATGCTGAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286719.12
ENST00000511880.7
ENST00000652700.1
CDS-3UTR TCA 90 bp ATTTTCAGCATAAAGTTTCACATGGAGAATAAGGGAGATAGTCTAGTGAGAAGCCCCAGTCACTCAAGGTaGTTAAACCGACTTTATCTG +
Preference number: 4 (lower is better)
Translates to: IFSIKFHMENKGDSLVRSPSHSR*LNRLYL
Trigger: CAGATAAAGTCGGTTTAATCACCTTGAGTGACTGGG...GCTTCTCACTAGACTATCTCCCTTATTCTCCATGTGAAACTTTATGCTGAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286719.12
CDS-3UTR TCA 90 bp ATTTTCAGCATAAAGTTTCACATGGAGAATAAGGGAGATAGTCTAGTGAGAAGCTGTGGCCATCTTTGTTaGAATCAATGCTCCGAGCAA +
Preference number: 4 (lower is better)
Translates to: IFSIKFHMENKGDSLVRSCGHLC*NQCSEQ
Trigger: TTGCTCGGAGCATTGATTTCAACAAAGATGGCCACA...GCTTCTCACTAGACTATCTCCCTTATTCTCCATGTGAAACTTTATGCTGAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286719.12
ENST00000511880.7
ENST00000652700.1
CDS-3UTR GCA 90 bp ATTTTCAGCATAAAGTTTCACATGGAGAATAAGGGAGATAGTCTAGTGAGAAGCGAAATCTCTTTAACATaGAGGCGTGATCCCCATCCT +
Preference number: 4 (lower is better)
Translates to: IFSIKFHMENKGDSLVRSEISLT*RRDPHP
Trigger: AGGATGGGGATCACGCCTGCATGTTAAAGAGATTTC...GCTTCTCACTAGACTATCTCCCTTATTCTCCATGTGAAACTTTATGCTGAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286719.12
ENST00000511880.7
CDS-3UTR CCA 90 bp ATCTGTAATGTCGATATTCATGTGAGAGCTGAACAGCTTCCAGGTCTGCCTGAAGTACCAGATGTTTCTTaGTTTCATACAAAAGGTTCA +
Preference number: 4 (lower is better)
Translates to: ICNVDIHVRAEQLPGLPEVPDVS*FHTKGS
Trigger: TGAACCTTTTGTATGAAACCAAGAAACATCTGGTAC...TTCAGGCAGACCTGGAAGCTGTTCAGCTCTCACATGAATATCGACATTACAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR CCA 90 bp ATTTTCAGCATAAAGTTTCACATGGAGAATAAGGGAGATAGTCTAGTGAGAAGCAATACAAAATTAGCCTaGTGTGGTGGTGCATGCCTG +
Preference number: 4 (lower is better)
Translates to: IFSIKFHMENKGDSLVRSNTKLA*CGGACL
Trigger: CAGGCATGCACCACCACACCAGGCTAATTTTGTATT...GCTTCTCACTAGACTATCTCCCTTATTCTCCATGTGAAACTTTATGCTGAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286719.12
ENST00000511880.7
ENST00000652700.1
CDS-3UTR TCA 90 bp ATTTTCAGCATAAAGTTTCACATGGAGAATAAGGGAGATAGTCTAGTGAGAAGCTCTGACACCCCACCATaGAGAATTAGAACTTTCTCA +
Preference number: 4 (lower is better)
Translates to: IFSIKFHMENKGDSLVRSSDTPP*RIRTFS
Trigger: TGAGAAAGTTCTAATTCTTCATGGTGGGGTGTCAGA...GCTTCTCACTAGACTATCTCCCTTATTCTCCATGTGAAACTTTATGCTGAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286719.12
ENST00000511880.7
CDS-3UTR TCA 90 bp ATTTTCAGCATAAAGTTTCACATGGAGAATAAGGGAGATAGTCTAGTGAGAAGCAGGTTTGCATTCATGTaGACGGATCAGGAATTGCAT +
Preference number: 4 (lower is better)
Translates to: IFSIKFHMENKGDSLVRSRFAFM*TDQELH
Trigger: ATGCAATTCCTGATCCGTTCACATGAATGCAAACCT...GCTTCTCACTAGACTATCTCCCTTATTCTCCATGTGAAACTTTATGCTGAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286719.12
ENST00000511880.7
ENST00000652700.1
CDS-3UTR TCA 90 bp ATTTTCAGCATAAAGTTTCACATGGAGAATAAGGGAGATAGTCTAGTGAGAAGCGAGATGAACCCTGAATaGTCACTGTCTATGATCCTA +
Preference number: 4 (lower is better)
Translates to: IFSIKFHMENKGDSLVRSEMNPE*SLSMIL
Trigger: TAGGATCATAGACAGTGATCATTCAGGGTTCATCTC...GCTTCTCACTAGACTATCTCCCTTATTCTCCATGTGAAACTTTATGCTGAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286719.12
ENST00000511880.7
ENST00000652700.1
CDS-3UTR TCA 90 bp TTTCCTTGCTCCTCTCTATTTTGTCCAAAAGCTCCAGATCAGTTATGTCTGACATGTTTGCTGACAAAATaGAGAGAGAATCTTCTTTGC +
Preference number: 4 (lower is better)
Translates to: FPCSSLFCPKAPDQLCLTCLLTK*RENLLC
Trigger: GCAAAGAAGATTCTCTCTTCATTTTGTCAGCAAACA...TGTCAGACATAACTGATCTGGAGCTTTTGGACAAAATAGAGAGGAGCAAGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR GCA 90 bp ATTTTCAGCATAAAGTTTCACATGGAGAATAAGGGAGATAGTCTAGTGAGAAGCTCTTCTGTCTCGTTTTaGACCTCATGGTGGAAACTA +
Preference number: 4 (lower is better)
Translates to: IFSIKFHMENKGDSLVRSSSVSF*TSWWKL
Trigger: TAGTTTCCACCATGAGGTGCAAAACGAGACAGAAGA...GCTTCTCACTAGACTATCTCCCTTATTCTCCATGTGAAACTTTATGCTGAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286719.12
ENST00000511880.7
CDS-3UTR CCA 90 bp ATTTTCAGCATAAAGTTTCACATGGAGAATAAGGGAGATAGTCTAGTGAGAAGCGCATATTCTATAGACTaGAAGATGCTCCAGGTGCAA +
Preference number: 4 (lower is better)
Translates to: IFSIKFHMENKGDSLVRSAYSID*KMLQVQ
Trigger: TTGCACCTGGAGCATCTTCCAGTCTATAGAATATGC...GCTTCTCACTAGACTATCTCCCTTATTCTCCATGTGAAACTTTATGCTGAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286719.12
ENST00000511880.7
CDS-3UTR CCA 90 bp TGGATCGGTTTCGATACAATGTTTCCAGCAAACTTGATTGTATGTTCTCGCGACCAACTTCATAGTAGTTaGAGGCAGAAAAGATTGTTA +
Preference number: 4 (lower is better)
Translates to: WIGFDTMFPANLIVCSRDQLHSS*RQKRLL
Trigger: TAACAATCTTTTCTGCCTCCAACTACTATGAAGTTG...GTCGCGAGAACATACAATCAAGTTTGCTGGAAACATTGTATCGAAACCGATCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR CCA 90 bp ATTTTCAGCATAAAGTTTCACATGGAGAATAAGGGAGATAGTCTAGTGAGAAGCGAGTTACATTGTCAGTaGTTCTTAACTGAAGTGGAC +
Preference number: 4 (lower is better)
Translates to: IFSIKFHMENKGDSLVRSELHCQ*FLTEVD
Trigger: GTCCACTTCAGTTAAGAACCACTGACAATGTAACTC...GCTTCTCACTAGACTATCTCCCTTATTCTCCATGTGAAACTTTATGCTGAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286719.12
ENST00000511880.7
ENST00000652700.1
CDS-3UTR GCA 90 bp TCTAGGTTGGATCGGTTTCGATACAATGTTTCCAGCAAACTTGATTGTATGTTCAGATTGTTAATACCTTaGGGTTGTGACAGAATTCAT +
Preference number: 4 (lower is better)
Translates to: SRLDRFRYNVSSKLDCMFRLLIP*GCDRIH
Trigger: ATGAATTCTGTCACAACCGCAAGGTATTAACAATCT...GAACATACAATCAAGTTTGCTGGAAACATTGTATCGAAACCGATCCAACCTAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR CAA 90 bp GGCTTCCGCAGCTCTCCGGCTTCAGAGTCTGCTTCTGAGGCTGAGCGGGAGGGCGCTGAGGCTGGAGGATaGCCTCAGCCCAGGAGGTCA +
Preference number: 5 (lower is better)
Translates to: GFRSSPASESASEAEREGAEAGG*PQPRRS
Trigger: TGACCTCCTGGGCTGAGGCAATCCTCCAGCCTCAGC...GCCCTCCCGCTCAGCCTCAGAAGCAGACTCTGAAGCCGGAGAGCTGCGGAAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR CAA 90 bp GGCTTCCGCAGCTCTCCGGCTTCAGAGTCTGCTTCTGAGGCTGAGCGGGAGGGCAGGAAGTCCCTGTCGTaGTGGCTGCTGGGGATGAAG +
Preference number: 5 (lower is better)
Translates to: GFRSSPASESASEAEREGRKSLS*WLLGMK
Trigger: CTTCATCCCCAGCAGCCACAACGACAGGGACTTCCT...GCCCTCCCGCTCAGCCTCAGAAGCAGACTCTGAAGCCGGAGAGCTGCGGAAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR CAA 90 bp CTACTCAGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGGGCCTTGCAGCCCTCTaGAGCCATGGGATCACTCCA +
Preference number: 5 (lower is better)
Translates to: LLRRLRQENRLGGGLCGEGLAAL*SHGITP
Trigger: TGGAGTGATCCCATGGCTCAAGAGGGCTGCAAGGCC...CTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCTGAGTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286719.12
ENST00000511880.7
CDS-3UTR CAA 90 bp AGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGCCGAGAATCCTGTCTTCAGAGTaGGCTGAGGGATCCCAGGCT +
Preference number: 5 (lower is better)
Translates to: RRLRQENRLGGGLCGEPRILSSE*AEGSQA
Trigger: AGCCTGGGATCCCTCAGCCAACTCTGAAGACAGGAT...TCTCGGCTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286719.12
ENST00000511880.7
CDS-3UTR CAA 90 bp AGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGCCGAGAATCAGGGCTGCTGCCTaGAAGGCTCTCTCTGCATTC +
Preference number: 5 (lower is better)
Translates to: RRLRQENRLGGGLCGEPRIRAAA*KALSAF
Trigger: GAATGCAGAGAGAGCCTTCAAGGCAGCAGCCCTGAT...TCTCGGCTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286719.12
ENST00000511880.7
CDS-3UTR CAA 90 bp AGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGCCGAGACAGGTTGAGACCCGGTaGATGTTTGGCAGCTGTACC +
Preference number: 5 (lower is better)
Translates to: RRLRQENRLGGGLCGEPRQVETR*MFGSCT
Trigger: GGTACAGCTGCCAAACATCAACCGGGTCTCAACCTG...TCTCGGCTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286719.12
ENST00000511880.7
CDS-3UTR CAA 90 bp CATTCTGAGGCATCGCCCTCTGGGCAGGATTTCTCCACAAGGCGGAAGGCCTCCGGCCTTGCAGCCCTCTaGAGCCATGGGATCACTCCA +
Preference number: 5 (lower is better)
Translates to: HSEASPSGQDFSTRRKASGLAAL*SHGITP
Trigger: TGGAGTGATCCCATGGCTCAAGAGGGCTGCAAGGCC...GGAGGCCTTCCGCCTTGTGGAGAAATCCTGCCCAGAGGGCGATGCCTCAGAATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR CAA 90 bp CTACTCAGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGATCCTGTCTTCAGAGTaGGCTGAGGGATCCCAGGCT +
Preference number: 5 (lower is better)
Translates to: LLRRLRQENRLGGGLCGEILSSE*AEGSQA
Trigger: AGCCTGGGATCCCTCAGCCAACTCTGAAGACAGGAT...CTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCTGAGTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286719.12
ENST00000511880.7
CDS-3UTR CAA 90 bp AGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGCCGAGAGAAAGCAAAATGATGTaGGGTGGAGGTGCCGCTTCC +
Preference number: 5 (lower is better)
Translates to: RRLRQENRLGGGLCGEPRESKMM*GGGAAS
Trigger: GGAAGCGGCACCTCCACCCAACATCATTTTGCTTTC...TCTCGGCTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286719.12
ENST00000511880.7
CDS-3UTR CAA 90 bp AGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGCCGAGAGTCATGGAGCTTGACTaGGTCTTGCTGCCCAGCATA +
Preference number: 5 (lower is better)
Translates to: RRLRQENRLGGGLCGEPRVMELD*VLLPSI
Trigger: TATGCTGGGCAGCAAGACCAAGTCAAGCTCCATGAC...TCTCGGCTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286719.12
ENST00000511880.7
CDS-3UTR CAA 90 bp CTACTCAGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGGCAGAGCTCTTCTGGTaGGCTCTTCTCTTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: LLRRLRQENRLGGGLCGEAELFW*ALLFSS
Trigger: GGAGGAGAAGAGAAGAGCCAACCAGAAGAGCTCTGC...CTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCTGAGTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286719.12
ENST00000511880.7
CDS-3UTR CAA 90 bp GGCTTCCGCAGCTCTCCGGCTTCAGAGTCTGCTTCTGAGGCTGAGCGGGAGGGCTTGTACTCCAGCATGTaGTCTGCTGAGCTGTTCACC +
Preference number: 5 (lower is better)
Translates to: GFRSSPASESASEAEREGLYSSM*SAELFT
Trigger: GGTGAACAGCTCAGCAGACAACATGCTGGAGTACAA...GCCCTCCCGCTCAGCCTCAGAAGCAGACTCTGAAGCCGGAGAGCTGCGGAAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR CAA 90 bp CTACTCAGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGGTCATGGAGCTTGACTaGGTCTTGCTGCCCAGCATA +
Preference number: 5 (lower is better)
Translates to: LLRRLRQENRLGGGLCGEVMELD*VLLPSI
Trigger: TATGCTGGGCAGCAAGACCAAGTCAAGCTCCATGAC...CTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCTGAGTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286719.12
ENST00000511880.7
CDS-3UTR CAA 90 bp AGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGCCGAGAAAGAAGTCATGGAGCTaGACTTGGTCTTGCTGCCCA +
Preference number: 5 (lower is better)
Translates to: RRLRQENRLGGGLCGEPRKKSWS*TWSCCP
Trigger: TGGGCAGCAAGACCAAGTCAAGCTCCATGACTTCTT...TCTCGGCTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286719.12
ENST00000511880.7
CDS-3UTR CAA 90 bp GGCTTCCGCAGCTCTCCGGCTTCAGAGTCTGCTTCTGAGGCTGAGCGGGAGGGCCTCTTCTGTCTCGTTTaGCACCTCATGGTGGAAACT +
Preference number: 5 (lower is better)
Translates to: GFRSSPASESASEAEREGLFCLV*HLMVET
Trigger: AGTTTCCACCATGAGGTGCAAAACGAGACAGAAGAG...GCCCTCCCGCTCAGCCTCAGAAGCAGACTCTGAAGCCGGAGAGCTGCGGAAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR CAA 90 bp AGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGCCGAGATTGTACTCCAGCATGTaGTCTGCTGAGCTGTTCACC +
Preference number: 5 (lower is better)
Translates to: RRLRQENRLGGGLCGEPRLYSSM*SAELFT
Trigger: GGTGAACAGCTCAGCAGACAACATGCTGGAGTACAA...TCTCGGCTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286719.12
ENST00000511880.7
ENST00000652700.1
CDS-3UTR CAA 90 bp AGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGCCGAGACGACTCAGTTGTTCCTaGGCCAAGTTCTTCAGCCAA +
Preference number: 5 (lower is better)
Translates to: RRLRQENRLGGGLCGEPRRLSCS*AKFFSQ
Trigger: TTGGCTGAAGAACTTGGCCAAGGAACAACTGAGTCG...TCTCGGCTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286719.12
ENST00000511880.7
ENST00000652700.1
CDS-3UTR CAA 90 bp AGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGCCGAGAGTTCTCGCGACTCAGTaGTTCCTTGGCCAAGTTCTT +
Preference number: 5 (lower is better)
Translates to: RRLRQENRLGGGLCGEPRVLATQ*FLGQVL
Trigger: AAGAACTTGGCCAAGGAACAACTGAGTCGCGAGAAC...TCTCGGCTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286719.12
ENST00000511880.7
ENST00000652700.1
CDS-3UTR CAA 90 bp AGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGCCGAGAGTGAAAACACTGAGTTaGGGTGTACAGGGACACAGC +
Preference number: 5 (lower is better)
Translates to: RRLRQENRLGGGLCGEPRVKTLS*GVQGHS
Trigger: GCTGTGTCCCTGTACACCCAAACTCAGTGTTTTCAC...TCTCGGCTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS CCA 90 bp CAGTCTGAATGCTTCTACCAGGGCAGTTGCATGGTCAGGCAGGAGTaGGAAGGAGAGGCGTGGCCCCGTGTAACTGTCGGGTACCTCTAT +
Preference number: 5 (lower is better)
Translates to: QSECFYQGSCMVRQE*EGEAWPRVTVGYLY
Trigger: ATAGAGGTACCCGACAGTTACACGGGGCCACGCCTCTCCTTCCCACTCCTGCCTGACCATGCAACTGCCCTGGTAGAAGCATTCAGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286719.12
ENST00000511880.7
ENST00000621010.1
CDS-3UTR CAA 90 bp CATTCTGAGGCATCGCCCTCTGGGCAGGATTTCTCCACAAGGCGGAAGGCCTCCGAAAGCAAAATGATGTaGGGTGGAGGTGCCGCTTCC +
Preference number: 5 (lower is better)
Translates to: HSEASPSGQDFSTRRKASESKMM*GGGAAS
Trigger: GGAAGCGGCACCTCCACCCAACATCATTTTGCTTTC...GGAGGCCTTCCGCCTTGTGGAGAAATCCTGCCCAGAGGGCGATGCCTCAGAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR CAA 90 bp AGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGCCGAGAGAGCTTGACTTGGTCTaGCTGCCCAGCATATTCTAT +
Preference number: 5 (lower is better)
Translates to: RRLRQENRLGGGLCGEPRELDLV*LPSIFY
Trigger: ATAGAATATGCTGGGCAGCAAGACCAAGTCAAGCTC...TCTCGGCTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286719.12
ENST00000511880.7
CDS-3UTR CAA 90 bp CTACTCAGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGGCGAGCATGGAGCTGTaGTTTCAGTCTGAATGCTTC +
Preference number: 5 (lower is better)
Translates to: LLRRLRQENRLGGGLCGEASMEL*FQSECF
Trigger: GAAGCATTCAGACTGAAACAACAGCTCCATGCTCGC...CTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCTGAGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286719.12
CDS-3UTR CAA 90 bp CTACTCAGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGCACTCTGCTAATCCTTaGCCTCATGGTGAGTGTGTG +
Preference number: 5 (lower is better)
Translates to: LLRRLRQENRLGGGLCGEHSANP*PHGECV
Trigger: CACACACTCACCATGAGGCAAAGGATTAGCAGAGTG...CTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCTGAGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286719.12
ENST00000511880.7
ENST00000652700.1
CDS-3UTR CAA 90 bp CTACTCAGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGCGACTCAGTTGTTCCTaGGCCAAGTTCTTCAGCCAA +
Preference number: 5 (lower is better)
Translates to: LLRRLRQENRLGGGLCGERLSCS*AKFFSQ
Trigger: TTGGCTGAAGAACTTGGCCAAGGAACAACTGAGTCG...CTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCTGAGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286719.12
ENST00000511880.7
ENST00000652700.1
CDS-3UTR CAA 90 bp AGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGCCGAGAGCCTCCAGGAACTCATaGATATCAATGTGGCCATCT +
Preference number: 5 (lower is better)
Translates to: RRLRQENRLGGGLCGEPRASRNS*ISMWPS
Trigger: AGATGGCCACATTGATATCAATGAGTTCCTGGAGGC...TCTCGGCTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286719.12
ENST00000511880.7
ENST00000652700.1
CDS-3UTR CAA 90 bp CCTGCTGGTTTTCTGGGCCTTGTAGGAGCCAAGCCGAAGGGGCGAAGAGGGAAGAAGAAGTCATGGAGCTaGACTTGGTCTTGCTGCCCA +
Preference number: 5 (lower is better)
Translates to: PAGFLGLVGAKPKGRRGKKKSWS*TWSCCP
Trigger: TGGGCAGCAAGACCAAGTCAAGCTCCATGACTTCTT...CTTCCCTCTTCGCCCCTTCGGCTTGGCTCCTACAAGGCCCAGAAAACCAGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR CAA 90 bp AGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGCCGAGATCCACAAAGTCACCGTaGAACACATATGACCGTTCT +
Preference number: 5 (lower is better)
Translates to: RRLRQENRLGGGLCGEPRSTKSP*NTYDRS
Trigger: AGAACGGTCATATGTGTTCAACGGTGACTTTGTGGA...TCTCGGCTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286719.12
ENST00000511880.7
CDS-3UTR CAA 90 bp AGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGCCGAGAGGTCACCTTGTTAGCTaGATACTGCACAATATGTGG +
Preference number: 5 (lower is better)
Translates to: RRLRQENRLGGGLCGEPRGHLVS*ILHNMW
Trigger: CCACATATTGTGCAGTATCAAGCTAACAAGGTGACC...TCTCGGCTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286719.12
ENST00000511880.7
ENST00000652700.1
CDS-3UTR CAA 90 bp CCTGCTGGTTTTCTGGGCCTTGTAGGAGCCAAGCCGAAGGGGCGAAGAGGGAAGCACTCTGCTAATCCTTaGCCTCATGGTGAGTGTGTG +
Preference number: 5 (lower is better)
Translates to: PAGFLGLVGAKPKGRRGKHSANP*PHGECV
Trigger: CACACACTCACCATGAGGCAAAGGATTAGCAGAGTG...CTTCCCTCTTCGCCCCTTCGGCTTGGCTCCTACAAGGCCCAGAAAACCAGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR CAA 90 bp AGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGCCGAGATTCTTCAGCCAAGACTaGTACTCCAGCATGTTGTCT +
Preference number: 5 (lower is better)
Translates to: RRLRQENRLGGGLCGEPRFFSQD*YSSMLS
Trigger: AGACAACATGCTGGAGTACAAGTCTTGGCTGAAGAA...TCTCGGCTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286719.12
ENST00000511880.7
ENST00000652700.1
CDS-3UTR CAA 90 bp AGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGCCGAGAATGTGGCCATCTTTGTaGAAATCAATGCTCCGAGCA +
Preference number: 5 (lower is better)
Translates to: RRLRQENRLGGGLCGEPRMWPSL*KSMLRA
Trigger: TGCTCGGAGCATTGATTTCAACAAAGATGGCCACAT...TCTCGGCTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286719.12
ENST00000511880.7
ENST00000652700.1
CDS-3UTR CAA 90 bp CTACTCAGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGGCCTCCAGGAACTCATaGATATCAATGTGGCCATCT +
Preference number: 5 (lower is better)
Translates to: LLRRLRQENRLGGGLCGEASRNS*ISMWPS
Trigger: AGATGGCCACATTGATATCAATGAGTTCCTGGAGGC...CTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCTGAGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286719.12
ENST00000511880.7
ENST00000652700.1
CDS-3UTR CAA 90 bp AGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGCCGAGAGATTGTTCCCTGTCTTaGGAACTTCCCAGGAAAATG +
Preference number: 5 (lower is better)
Translates to: RRLRQENRLGGGLCGEPRDCSLS*ELPRKM
Trigger: CATTTTCCTGGGAAGTTCCAAAGACAGGGAACAATC...TCTCGGCTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR CAA 90 bp GGCTTCCGCAGCTCTCCGGCTTCAGAGTCTGCTTCTGAGGCTGAGCGGGAGGGCCCATATCCATTAGAATaGCCCAAAGCTGAAGTAGAC +
Preference number: 5 (lower is better)
Translates to: GFRSSPASESASEAEREGPYPLE*PKAEVD
Trigger: GTCTACTTCAGCTTTGGGCAATTCTAATGGATATGG...GCCCTCCCGCTCAGCCTCAGAAGCAGACTCTGAAGCCGGAGAGCTGCGGAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS TCA 90 bp CACTGCATTTCTTCATCTCGGAGTCCTGGGCGAATCTGTCCTCAGTaGATATGCGGGTCAGGAAGTCCCTGTCGTTGTGGCTGCTGGGGA +
Preference number: 5 (lower is better)
Translates to: HCISSSRSPGRICPQ*ICGSGSPCRCGCWG
Trigger: TCCCCAGCAGCCACAACGACAGGGACTTCCTGACCCGCATATTCACTGAGGACAGATTCGCCCAGGACTCCGAGATGAAGAAATGCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286719.12
ENST00000511880.7
ENST00000621010.1
CDS-3UTR CAA 90 bp AGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGCCGAGATCCTTCCCGTGTACCTaGTATTTATTCATCACTTCC +
Preference number: 5 (lower is better)
Translates to: RRLRQENRLGGGLCGEPRSFPCT*YLFITS
Trigger: GGAAGTGATGAATAAATACAAGGTACACGGGAAGGA...TCTCGGCTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286719.12
ENST00000511880.7
CDS-3UTR CAA 90 bp AGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGCCGAGATGGAGGCAGAAAAGATaGTTAATACCTTGCGGTTGT +
Preference number: 5 (lower is better)
Translates to: RRLRQENRLGGGLCGEPRWRQKR*LIPCGC
Trigger: ACAACCGCAAGGTATTAACAATCTTTTCTGCCTCCA...TCTCGGCTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286719.12
ENST00000511880.7
ENST00000652700.1
CDS-3UTR CAA 90 bp AGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGCCGAGAATGTTTCCAGCAAACTaGATTGTATGTTCTCGCGAC +
Preference number: 5 (lower is better)
Translates to: RRLRQENRLGGGLCGEPRMFPAN*IVCSRD
Trigger: GTCGCGAGAACATACAATCAAGTTTGCTGGAAACAT...TCTCGGCTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286719.12
ENST00000511880.7
ENST00000652700.1
CDS-3UTR CAA 90 bp GGCTTCCGCAGCTCTCCGGCTTCAGAGTCTGCTTCTGAGGCTGAGCGGGAGGGCAAAATGGTCTCTAGGTaGGATCGGTTTCGATACAAT +
Preference number: 5 (lower is better)
Translates to: GFRSSPASESASEAEREGKMVSR*DRFRYN
Trigger: ATTGTATCGAAACCGATCCAACCTAGAGACCATTTT...GCCCTCCCGCTCAGCCTCAGAAGCAGACTCTGAAGCCGGAGAGCTGCGGAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR CAA 90 bp CATTCTGAGGCATCGCCCTCTGGGCAGGATTTCTCCACAAGGCGGAAGGCCTCCGCCTCCAGGAACTCATaGATATCAATGTGGCCATCT +
Preference number: 5 (lower is better)
Translates to: HSEASPSGQDFSTRRKASASRNS*ISMWPS
Trigger: AGATGGCCACATTGATATCAATGAGTTCCTGGAGGC...GGAGGCCTTCCGCCTTGTGGAGAAATCCTGCCCAGAGGGCGATGCCTCAGAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR CAA 90 bp GCTGGTTTTCTGGGCCTTGTAGGAGCCAAGCCGAAGGGGCGAAGAGGGAAGAGAGTGAGAGCTAACCTGTaGCCTTGTCACCTAGAAGTC +
Preference number: 5 (lower is better)
Translates to: AGFLGLVGAKPKGRRGKRVRANL*PCHLEV
Trigger: GACTTCTAGGTGACAAGGCAACAGGTTAGCTCTCAC...TCTCTTCCCTCTTCGCCCCTTCGGCTTGGCTCCTACAAGGCCCAGAAAACCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR CAA 90 bp TCCGCAGCTCTCCGGCTTCAGAGTCTGCTTCTGAGGCTGAGCGGGAGGGCTCCTTTATTCATCACTTCCTaGGTGAAGCCATATCGTAAG +
Preference number: 5 (lower is better)
Translates to: SAALRLQSLLLRLSGRAPLFITS*VKPYRK
Trigger: CTTACGATATGGCTTCACCAAGGAAGTGATGAATAA...AGGAGCCCTCCCGCTCAGCCTCAGAAGCAGACTCTGAAGCCGGAGAGCTGCGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR CAA 90 bp CTACTCAGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGTGGAGGCAGAAAAGATaGTTAATACCTTGCGGTTGT +
Preference number: 5 (lower is better)
Translates to: LLRRLRQENRLGGGLCGEWRQKR*LIPCGC
Trigger: ACAACCGCAAGGTATTAACAATCTTTTCTGCCTCCA...CTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCTGAGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286719.12
ENST00000511880.7
ENST00000652700.1
CDS-3UTR CAA 90 bp AGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGCCGAGAAAAATGGTCTCTAGGTaGGATCGGTTTCGATACAAT +
Preference number: 5 (lower is better)
Translates to: RRLRQENRLGGGLCGEPRKMVSR*DRFRYN
Trigger: ATTGTATCGAAACCGATCCAACCTAGAGACCATTTT...TCTCGGCTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000286719.12
ENST00000511880.7
ENST00000652700.1
CDS-3UTR CAA 90 bp AAAATAACAGCCTCCTCCTCGAATAGTGTTGGCCTTGCAGCCCTCTTGAGCCATCTTCTACCAGGGCAGTaGCATGGTCAGGCAGGAGTG +
Preference number: 5 (lower is better)
Translates to: KITASSSNSVGLAALLSHLLPGQ*HGQAGV
Trigger: CACTCCTGCCTGACCATGCAACTGCCCTGGTAGAAG...ATGGCTCAAGAGGGCTGCAAGGCCAACACTATTCGAGGAGGAGGCTGTTATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR CAA 90 bp GCTGGTTTTCTGGGCCTTGTAGGAGCCAAGCCGAAGGGGCGAAGAGGGAAGAGATCCACAAAGTCACCGTaGAACACATATGACCGTTCT +
Preference number: 5 (lower is better)
Translates to: AGFLGLVGAKPKGRRGKRSTKSP*NTYDRS
Trigger: AGAACGGTCATATGTGTTCAACGGTGACTTTGTGGA...TCTCTTCCCTCTTCGCCCCTTCGGCTTGGCTCCTACAAGGCCCAGAAAACCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR CAA 90 bp CTACTCAGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGTTATTCATCACTTCCTaGGTGAAGCCATATCGTAAG +
Preference number: 5 (lower is better)
Translates to: LLRRLRQENRLGGGLCGELFITS*VKPYRK
Trigger: CTTACGATATGGCTTCACCAAGGAAGTGATGAATAA...CTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCTGAGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286719.12
ENST00000511880.7
CDS-3UTR CAA 90 bp CTACTCAGGAGGCTGAGGCAGGAGAATCGCCTGGGAGGCGGACTTTGCGGTGAGAAAATGGTCTCTAGGTaGGATCGGTTTCGATACAAT +
Preference number: 5 (lower is better)
Translates to: LLRRLRQENRLGGGLCGEKMVSR*DRFRYN
Trigger: ATTGTATCGAAACCGATCCAACCTAGAGACCATTTT...CTCACCGCAAAGTCCGCCTCCCAGGCGATTCTCCTGCCTCAGCCTCCTGAGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286719.12
ENST00000511880.7
ENST00000652700.1
CDS-3UTR CAA 90 bp ACAGCCTCCTCCTCGAATAGTGTTGGCCTTGCAGCCCTCTTGAGCCATGGGATCTTCTTCAGCCAAGACTaGTACTCCAGCATGTTGTCT +
Preference number: 5 (lower is better)
Translates to: TASSSNSVGLAALLSHGIFFSQD*YSSMLS
Trigger: AGACAACATGCTGGAGTACAAGTCTTGGCTGAAGAA...GATCCCATGGCTCAAGAGGGCTGCAAGGCCAACACTATTCGAGGAGGAGGCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR CAA 90 bp TTAGTGTGCACCTGGACTGCTGCAGCCACTGTCTTTAGCATTTGTAGCTTGTGGAGCATGGAGCTGCTATaGTTTCAGTCTGAATGCTTC +
Preference number: 5 (lower is better)
Translates to: LVCTWTAAATVFSICSLWSMELL*FQSECF
Trigger: GAAGCATTCAGACTGAAACAATAGCAGCTCCATGCT...CCACAAGCTACAAATGCTAAAGACAGTGGCTGCAGCAGTCCAGGTGCACACTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR CAA 90 bp AAAATAACAGCCTCCTCCTCGAATAGTGTTGGCCTTGCAGCCCTCTTGAGCCATTCCTTCCCGTGTACCTaGTATTTATTCATCACTTCC +
Preference number: 5 (lower is better)
Translates to: KITASSSNSVGLAALLSHSFPCT*YLFITS
Trigger: GGAAGTGATGAATAAATACAAGGTACACGGGAAGGA...ATGGCTCAAGAGGGCTGCAAGGCCAACACTATTCGAGGAGGAGGCTGTTATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR CAA 90 bp TTAGTGTGCACCTGGACTGCTGCAGCCACTGTCTTTAGCATTTGTAGCTTGTGGTTGCTCCTCTCTATTTaGTCCAAAAGCTCCAGATCA +
Preference number: 5 (lower is better)
Translates to: LVCTWTAAATVFSICSLWLLLSI*SKSSRS
Trigger: TGATCTGGAGCTTTTGGACAAAATAGAGAGGAGCAA...CCACAAGCTACAAATGCTAAAGACAGTGGCTGCAGCAGTCCAGGTGCACACTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR CAA 90 bp TTAGTGTGCACCTGGACTGCTGCAGCCACTGTCTTTAGCATTTGTAGCTTGTGGATGTTTCCAGCAAACTaGATTGTATGTTCTCGCGAC +
Preference number: 5 (lower is better)
Translates to: LVCTWTAAATVFSICSLWMFPAN*IVCSRD
Trigger: GTCGCGAGAACATACAATCAAGTTTGCTGGAAACAT...CCACAAGCTACAAATGCTAAAGACAGTGGCTGCAGCAGTCCAGGTGCACACTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR CAA 90 bp ATTTTCAGCATAAAGTTTCACATGGAGAATAAGGGAGATAGTCTAGTGAGAAGCAGGAAGTCCCTGTCGTaGTGGCTGCTGGGGATGAAG +
Preference number: 5 (lower is better)
Translates to: IFSIKFHMENKGDSLVRSRKSLS*WLLGMK
Trigger: CTTCATCCCCAGCAGCCACAACGACAGGGACTTCCT...GCTTCTCACTAGACTATCTCCCTTATTCTCCATGTGAAACTTTATGCTGAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286719.12
ENST00000511880.7
CDS-3UTR CAA 90 bp ATTTTCAGCATAAAGTTTCACATGGAGAATAAGGGAGATAGTCTAGTGAGAAGCCTTCTACCAGGGCAGTaGCATGGTCAGGCAGGAGTG +
Preference number: 5 (lower is better)
Translates to: IFSIKFHMENKGDSLVRSLLPGQ*HGQAGV
Trigger: CACTCCTGCCTGACCATGCAACTGCCCTGGTAGAAG...GCTTCTCACTAGACTATCTCCCTTATTCTCCATGTGAAACTTTATGCTGAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286719.12
ENST00000511880.7
CDS-3UTR CAA 90 bp TGGATCGGTTTCGATACAATGTTTCCAGCAAACTTGATTGTATGTTCTCGCGACGTTCTCGCGACTCAGTaGTTCCTTGGCCAAGTTCTT +
Preference number: 5 (lower is better)
Translates to: WIGFDTMFPANLIVCSRDVLATQ*FLGQVL
Trigger: AAGAACTTGGCCAAGGAACAACTGAGTCGCGAGAAC...GTCGCGAGAACATACAATCAAGTTTGCTGGAAACATTGTATCGAAACCGATCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR CAA 90 bp ATTTTCAGCATAAAGTTTCACATGGAGAATAAGGGAGATAGTCTAGTGAGAAGCCAGGTTGAGACCCGGTaGATGTTTGGCAGCTGTACC +
Preference number: 5 (lower is better)
Translates to: IFSIKFHMENKGDSLVRSQVETR*MFGSCT
Trigger: GGTACAGCTGCCAAACATCAACCGGGTCTCAACCTG...GCTTCTCACTAGACTATCTCCCTTATTCTCCATGTGAAACTTTATGCTGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286719.12
ENST00000511880.7
CDS-3UTR CAA 90 bp ATTTTCAGCATAAAGTTTCACATGGAGAATAAGGGAGATAGTCTAGTGAGAAGCGCAGAGCTCTTCTGGTaGGCTCTTCTCTTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: IFSIKFHMENKGDSLVRSAELFW*ALLFSS
Trigger: GGAGGAGAAGAGAAGAGCCAACCAGAAGAGCTCTGC...GCTTCTCACTAGACTATCTCCCTTATTCTCCATGTGAAACTTTATGCTGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286719.12
ENST00000511880.7
CDS-3UTR CAA 90 bp TTTCCTTGCTCCTCTCTATTTTGTCCAAAAGCTCCAGATCAGTTATGTCTGACAGAGCTTGACTTGGTCTaGCTGCCCAGCATATTCTAT +
Preference number: 5 (lower is better)
Translates to: FPCSSLFCPKAPDQLCLTELDLV*LPSIFY
Trigger: ATAGAATATGCTGGGCAGCAAGACCAAGTCAAGCTC...TGTCAGACATAACTGATCTGGAGCTTTTGGACAAAATAGAGAGGAGCAAGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR CAA 90 bp ATTTTCAGCATAAAGTTTCACATGGAGAATAAGGGAGATAGTCTAGTGAGAAGCTTGTACTCCAGCATGTaGTCTGCTGAGCTGTTCACC +
Preference number: 5 (lower is better)
Translates to: IFSIKFHMENKGDSLVRSLYSSM*SAELFT
Trigger: GGTGAACAGCTCAGCAGACAACATGCTGGAGTACAA...GCTTCTCACTAGACTATCTCCCTTATTCTCCATGTGAAACTTTATGCTGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286719.12
ENST00000511880.7
ENST00000652700.1
CDS-3UTR CAA 90 bp ATTTTCAGCATAAAGTTTCACATGGAGAATAAGGGAGATAGTCTAGTGAGAAGCCGACTCAGTTGTTCCTaGGCCAAGTTCTTCAGCCAA +
Preference number: 5 (lower is better)
Translates to: IFSIKFHMENKGDSLVRSRLSCS*AKFFSQ
Trigger: TTGGCTGAAGAACTTGGCCAAGGAACAACTGAGTCG...GCTTCTCACTAGACTATCTCCCTTATTCTCCATGTGAAACTTTATGCTGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286719.12
ENST00000511880.7
ENST00000652700.1
CDS-3UTR CAA 90 bp ATTTTCAGCATAAAGTTTCACATGGAGAATAAGGGAGATAGTCTAGTGAGAAGCGTTCTCGCGACTCAGTaGTTCCTTGGCCAAGTTCTT +
Preference number: 5 (lower is better)
Translates to: IFSIKFHMENKGDSLVRSVLATQ*FLGQVL
Trigger: AAGAACTTGGCCAAGGAACAACTGAGTCGCGAGAAC...GCTTCTCACTAGACTATCTCCCTTATTCTCCATGTGAAACTTTATGCTGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286719.12
ENST00000511880.7
ENST00000652700.1
CDS-3UTR CAA 90 bp TTTCCTTGCTCCTCTCTATTTTGTCCAAAAGCTCCAGATCAGTTATGTCTGACAATGTGGCCATCTTTGTaGAAATCAATGCTCCGAGCA +
Preference number: 5 (lower is better)
Translates to: FPCSSLFCPKAPDQLCLTMWPSL*KSMLRA
Trigger: TGCTCGGAGCATTGATTTCAACAAAGATGGCCACAT...TGTCAGACATAACTGATCTGGAGCTTTTGGACAAAATAGAGAGGAGCAAGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR CAA 90 bp TTTCCTTGCTCCTCTCTATTTTGTCCAAAAGCTCCAGATCAGTTATGTCTGACATGTAGCAGCATTTCCTaGCTCCTCTCTATTTTGTCC +
Preference number: 5 (lower is better)
Translates to: FPCSSLFCPKAPDQLCLTCSSIS*LLSILS
Trigger: GGACAAAATAGAGAGGAGCAAGGAAATGCTGCTACA...TGTCAGACATAACTGATCTGGAGCTTTTGGACAAAATAGAGAGGAGCAAGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR CAA 90 bp ATTTTCAGCATAAAGTTTCACATGGAGAATAAGGGAGATAGTCTAGTGAGAAGCCTCTTCTGTCTCGTTTaGCACCTCATGGTGGAAACT +
Preference number: 5 (lower is better)
Translates to: IFSIKFHMENKGDSLVRSLFCLV*HLMVET
Trigger: AGTTTCCACCATGAGGTGCAAAACGAGACAGAAGAG...GCTTCTCACTAGACTATCTCCCTTATTCTCCATGTGAAACTTTATGCTGAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286719.12
ENST00000511880.7
CDS-3UTR CAA 90 bp TTTCCTTGCTCCTCTCTATTTTGTCCAAAAGCTCCAGATCAGTTATGTCTGACATCAATGTGGCCATCTTaGTTGAAATCAATGCTCCGA +
Preference number: 5 (lower is better)
Translates to: FPCSSLFCPKAPDQLCLTSMWPS*LKSMLR
Trigger: TCGGAGCATTGATTTCAACAAAGATGGCCACATTGA...TGTCAGACATAACTGATCTGGAGCTTTTGGACAAAATAGAGAGGAGCAAGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511880.7
CDS-3UTR CAA 90 bp ATTTTCAGCATAAAGTTTCACATGGAGAATAAGGGAGATAGTCTAGTGAGAAGCGGTCACCTTGTTAGCTaGATACTGCACAATATGTGG +
Preference number: 5 (lower is better)
Translates to: IFSIKFHMENKGDSLVRSGHLVS*ILHNMW
Trigger: CCACATATTGTGCAGTATCAAGCTAACAAGGTGACC...GCTTCTCACTAGACTATCTCCCTTATTCTCCATGTGAAACTTTATGCTGAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286719.12
ENST00000511880.7
ENST00000652700.1
CDS-3UTR CAA 90 bp ATTTTCAGCATAAAGTTTCACATGGAGAATAAGGGAGATAGTCTAGTGAGAAGCATGTGGCCATCTTTGTaGAAATCAATGCTCCGAGCA +
Preference number: 5 (lower is better)
Translates to: IFSIKFHMENKGDSLVRSMWPSL*KSMLRA
Trigger: TGCTCGGAGCATTGATTTCAACAAAGATGGCCACAT...GCTTCTCACTAGACTATCTCCCTTATTCTCCATGTGAAACTTTATGCTGAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286719.12
ENST00000511880.7
ENST00000652700.1
CDS TCA 90 bp TCCATACTCTTAATGGCCTCCACACTCTTAACAGCCATAATCAGTTaGCTGCAGTCAGCATGTAAGATGACATTTATATTGGCAATGAAA +
Preference number: 5 (lower is better)
Translates to: SILLMASTLLTAIIS*LQSACKMTFILAMK
Trigger: TTTCATTGCCAATATAAATGTCATCTTACATGCTGACTGCAGTCAACTGATTATGGCTGTTAAGAGTGTGGAGGCCATTAAGAGTATGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513324.1
CDS-3UTR CAA 90 bp ATTTTCAGCATAAAGTTTCACATGGAGAATAAGGGAGATAGTCTAGTGAGAAGCTTGCTCCTCTCTATTTaGTCCAAAAGCTCCAGATCA +
Preference number: 5 (lower is better)
Translates to: IFSIKFHMENKGDSLVRSLLLSI*SKSSRS
Trigger: TGATCTGGAGCTTTTGGACAAAATAGAGAGGAGCAA...GCTTCTCACTAGACTATCTCCCTTATTCTCCATGTGAAACTTTATGCTGAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286719.12
ENST00000511880.7
CDS-3UTR CAA 90 bp ATTTTCAGCATAAAGTTTCACATGGAGAATAAGGGAGATAGTCTAGTGAGAAGCATGGTGGAAACTATCTaGCTCCTCTCTATTTTGTCC +
Preference number: 5 (lower is better)
Translates to: IFSIKFHMENKGDSLVRSMVETI*LLSILS
Trigger: GGACAAAATAGAGAGGAGCAAGATAGTTTCCACCAT...GCTTCTCACTAGACTATCTCCCTTATTCTCCATGTGAAACTTTATGCTGAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286719.12
CDS-3UTR CAA 90 bp ATTTTCAGCATAAAGTTTCACATGGAGAATAAGGGAGATAGTCTAGTGAGAAGCTGGAGGCAGAAAAGATaGTTAATACCTTGCGGTTGT +
Preference number: 5 (lower is better)
Translates to: IFSIKFHMENKGDSLVRSWRQKR*LIPCGC
Trigger: ACAACCGCAAGGTATTAACAATCTTTTCTGCCTCCA...GCTTCTCACTAGACTATCTCCCTTATTCTCCATGTGAAACTTTATGCTGAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286719.12
ENST00000511880.7
ENST00000652700.1
CDS-3UTR CAA 90 bp ATTTTCAGCATAAAGTTTCACATGGAGAATAAGGGAGATAGTCTAGTGAGAAGCTCAATGTGGCCATCTTaGTTGAAATCAATGCTCCGA +
Preference number: 5 (lower is better)
Translates to: IFSIKFHMENKGDSLVRSSMWPS*LKSMLR
Trigger: TCGGAGCATTGATTTCAACAAAGATGGCCACATTGA...GCTTCTCACTAGACTATCTCCCTTATTCTCCATGTGAAACTTTATGCTGAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286719.12
ENST00000511880.7
ENST00000652700.1
CDS CCA 72 bp TGCTTCTACCAGGGCAGTTGCATGGTCAGGCAGGAGTaGGAAGGAGAGGCGTGGCCCCGTGTAACTGTCGGG +
Preference number: 6 (lower is better)
Translates to: CFYQGSCMVRQE*EGEAWPRVTVG
Trigger: CCCGACAGTTACACGGGGCCACGCCTCTCCTTCCCACTCCTGCCTGACCATGCAACTGCCCTGGTAGAAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286719.12
ENST00000511880.7
ENST00000621010.1
CDS TCA 72 bp GTTCAGGCTTCTTGCCTCGAAGGAGTAGGCACCCCCTaGCGTCAGTCAGATCAGGCCCCCAAGGAAGATTTG +
Preference number: 6 (lower is better)
Translates to: VQASCLEGVGTP*RQSDQAPKEDL
Trigger: CAAATCTTCCTTGGGGGCCTGATCTGACTGACGTCAGGGGGTGCCTACTCCTTCGAGGCAAGAAGCCTGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000510607.1
CDS TCA 72 bp TCTTCATCTCGGAGTCCTGGGCGAATCTGTCCTCAGTaGATATGCGGGTCAGGAAGTCCCTGTCGTTGTGGC +
Preference number: 6 (lower is better)
Translates to: SSSRSPGRICPQ*ICGSGSPCRCG
Trigger: GCCACAACGACAGGGACTTCCTGACCCGCATATTCACTGAGGACAGATTCGCCCAGGACTCCGAGATGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286719.12
ENST00000511880.7
ENST00000621010.1
CDS GCA 72 bp ACCTACAGAGCCCATAAAGAAGGTGCAGCCCTAGTCTaGCATGTCTTCTTCCTGAAAAGCAATGGTGACATT +
Preference number: 6 (lower is better)
Translates to: TYRAHKEGAALV*HVFFLKSNGDI
Trigger: AATGTCACCATTGCTTTTCAGGAAGAAGACATGGCAGACTAGGGCTGCACCTTCTTTATGGGCTCTGTAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286719.12
ENST00000510607.1
CDS GCA 72 bp TGTAACTGTCGGGTACCTCTATGGATTCATAGTCACTaGATTTCTTCATCTCGGAGTCCTGGGCGAATCTGT +
Preference number: 6 (lower is better)
Translates to: CNCRVPLWIHSH*ISSSRSPGRIC
Trigger: ACAGATTCGCCCAGGACTCCGAGATGAAGAAATGCAGTGACTATGAATCCATAGAGGTACCCGACAGTTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286719.12
ENST00000511880.7
ENST00000621010.1
CDS CAA 72 bp CACCTCATGGTGGAAACTATCTTGCTCCTCTCTATTTaGTCCAAAAGCTCCAGATCAGTTATGTCTGACACC +
Preference number: 6 (lower is better)
Translates to: HLMVETILLLSI*SKSSRSVMSDT
Trigger: GGTGTCAGACATAACTGATCTGGAGCTTTTGGACAAAATAGAGAGGAGCAAGATAGTTTCCACCATGAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286719.12
ENST00000621010.1
CDS TCA 72 bp TTAATGGCCTCCACACTCTTAACAGCCATAATCAGTTaGCTGCAGTCAGCATGTAAGATGACATTTATATTG +
Preference number: 6 (lower is better)
Translates to: LMASTLLTAIIS*LQSACKMTFIL
Trigger: CAATATAAATGTCATCTTACATGCTGACTGCAGTCAACTGATTATGGCTGTTAAGAGTGTGGAGGCCATTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513324.1
CDS CAA 72 bp ATTATTTCATTAACCACTACCTTGCTCCTCTCTATTTaGTCCAAAAGCTCCAGATCAGTTATGTCTGACACC +
Preference number: 6 (lower is better)
Translates to: IISLTTTLLLSI*SKSSRSVMSDT
Trigger: GGTGTCAGACATAACTGATCTGGAGCTTTTGGACAAAATAGAGAGGAGCAAGGTAGTGGTTAATGAAATAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513324.1