RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PPARD (Homo sapiens)

Ensembl gene IDs: ENSG00000112033

Ensembl transcript IDs: ENST00000311565.4, ENST00000337400.6, ENST00000360694.8, ENST00000418635.6, ENST00000448077.6

Found 831 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTGAGGTGGGGGCCCACCTGGAGGGAACCCTGCCTACTTCCAAGCTaGGAGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAAC +
Preference number: 1 (lower is better)
Translates to: VRWGPTWREPCLLPS*ESAVQRPVQGAISN
Trigger: GTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCTCCCAGCTTGGAAGTAGGCAGGGTTCCCTCCAGGTGGGCCCCCACCTCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR GCA 90 bp GGGGCCCACCTGGAGGGAACCCTGCCTACTTCCAAGCTGGGAGAGTaGCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCT +
Preference number: 1 (lower is better)
Translates to: GAHLEGTLPTSKLGE*RPAASAGGHQQHWP
Trigger: AGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCTCCCAGCTTGGAAGTAGGCAGGGTTCCCTCCAGGTGGGCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR GCA 90 bp GCTCTGCGCCGCTCAGACATGGCATGCCCAGCTGTGCTTTGGCCCTaGTCTGAGGTGAGCGCACCTCAACCTGGGAGCAGGGGAGGGCAG +
Preference number: 1 (lower is better)
Translates to: ALRRSDMACPAVLWP*SEVSAPQPGSRGGQ
Trigger: CTGCCCTCCCCTGCTCCCAGGTTGAGGTGCGCTCACCTCAGAGCAGGGCCAAAGCACAGCTGGGCATGCCATGTCTGAGCGGCGCAGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR CCA 90 bp GGGCGATCGTGGGACTCTGCTGCTCCAGGCCGGGTGCTCAAGGGCTaGTCAATGGAAAAGTCATGTGGGTGGGCCCCTCCAGTGCTGGCC +
Preference number: 1 (lower is better)
Translates to: GRSWDSAAPGRVLKG*SMEKSCGWAPPVLA
Trigger: GGCCAGCACTGGAGGGGCCCACCCACATGACTTTTCCATTGACCAGCCCTTGAGCACCCGGCCTGGAGCAGCAGAGTCCCACGATCGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR GCA 90 bp ACTTGCTCCTCTTCAGTGAGGTGGGGGCCCACCTGGAGGGAACCCTaGCTACTTCCAAGCTGGGAGAGTGCCGTCCAGCGGCCAGTGCAG +
Preference number: 1 (lower is better)
Translates to: TCSSSVRWGPTWREP*LLPSWESAVQRPVQ
Trigger: CTGCACTGGCCGCTGGACGGCACTCTCCCAGCTTGGAAGTAGGCAGGGTTCCCTCCAGGTGGGCCCCCACCTCACTGAAGAGGAGCAAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR GCA 90 bp CATGTGTCTGAGGGCGATCGTGGGACTCTGCTGCTCCAGGCCGGGTaGTCAAGGGCTGGTCAATGGAAAAGTCATGTGGGTGGGCCCCTC +
Preference number: 1 (lower is better)
Translates to: HVSEGDRGTLLLQAG*SRAGQWKSHVGGPL
Trigger: GAGGGGCCCACCCACATGACTTTTCCATTGACCAGCCCTTGAGCACCCGGCCTGGAGCAGCAGAGTCCCACGATCGCCCTCAGACACATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR GCA 90 bp CCAGAGGCCGTGGGTGTCATGTGTCTGAGGGCGATCGTGGGACTCTaGTGCTCCAGGCCGGGTGCTCAAGGGCTGGTCAATGGAAAAGTC +
Preference number: 1 (lower is better)
Translates to: PEAVGVMCLRAIVGL*CSRPGAQGLVNGKV
Trigger: GACTTTTCCATTGACCAGCCCTTGAGCACCCGGCCTGGAGCAGCAGAGTCCCACGATCGCCCTCAGACACATGACACCCACGGCCTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR GCA 90 bp CTGCCCACTGTCCTTTGCAGCAGGGACCCCATGACTATAGGGGGCTaGAGTCAGTCCAGGCCATGCTTAGCCTTCCCTGGAACCCAGGCC +
Preference number: 1 (lower is better)
Translates to: LPTVLCSRDPMTIGG*SQSRPCLAFPGTQA
Trigger: GGCCTGGGTTCCAGGGAAGGCTAAGCATGGCCTGGACTGACTGCAGCCCCCTATAGTCATGGGGTCCCTGCTGCAAAGGACAGTGGGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR GCA 90 bp AAGATCACAGGGACACTTCCCCACACTGTCAGAGCTCAGGCACAGTaGCCTGCAGTGAGGGCCAACCCCCAGGACGACTGGGTGTGCCAG +
Preference number: 1 (lower is better)
Translates to: KITGTLPHTVRAQAQ*PAVRANPQDDWVCQ
Trigger: CTGGCACACCCAGTCGTCCTGGGGGTTGGCCCTCACTGCAGGGCACTGTGCCTGAGCTCTGACAGTGTGGGGAAGTGTCCCTGTGATCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337400.6
3UTR GCA 90 bp GAGGCCGTGGGTGTCATGTGTCTGAGGGCGATCGTGGGACTCTGCTaGTCCAGGCCGGGTGCTCAAGGGCTGGTCAATGGAAAAGTCATG +
Preference number: 1 (lower is better)
Translates to: EAVGVMCLRAIVGLC*SRPGAQGLVNGKVM
Trigger: CATGACTTTTCCATTGACCAGCCCTTGAGCACCCGGCCTGGAGCAGCAGAGTCCCACGATCGCCCTCAGACACATGACACCCACGGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR GCA 90 bp AACCCTGCCTACTTCCAAGCTGGGAGAGTGCCGTCCAGCGGCCAGTaGAGGGGGCCATCAGCAACATTGGCCTGGCAAACCAGTGTGAAG +
Preference number: 1 (lower is better)
Translates to: NPAYFQAGRVPSSGQ*RGPSATLAWQTSVK
Trigger: CTTCACACTGGTTTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCTCCCAGCTTGGAAGTAGGCAGGGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR CCA 90 bp CTGGGTGTCAGTGGGGCTGAGGTGTGCTGCTGGAGCAGGATCAGTTaGGTCAGTGGGTGGCCTCAGCATCGGAGGGGCAATGACAGTCTT +
Preference number: 1 (lower is better)
Translates to: LGVSGAEVCCWSRIS*VSGWPQHRRGNDSL
Trigger: AAGACTGTCATTGCCCCTCCGATGCTGAGGCCACCCACTGACCCAACTGATCCTGCTCCAGCAGCACACCTCAGCCCCACTGACACCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR CCA 90 bp GAAGATGGAAGGACACTGGGTGTCAGTGGGGCTGAGGTGTGCTGCTaGAGCAGGATCAGTTGGGTCAGTGGGTGGCCTCAGCATCGGAGG +
Preference number: 1 (lower is better)
Translates to: EDGRTLGVSGAEVCC*SRISWVSGWPQHRR
Trigger: CCTCCGATGCTGAGGCCACCCACTGACCCAACTGATCCTGCTCCAGCAGCACACCTCAGCCCCACTGACACCCAGTGTCCTTCCATCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR GCA 90 bp TGTGAAGATGGAAGGACACTGGGTGTCAGTGGGGCTGAGGTGTGCTaGTGGAGCAGGATCAGTTGGGTCAGTGGGTGGCCTCAGCATCGG +
Preference number: 1 (lower is better)
Translates to: CEDGRTLGVSGAEVC*WSRISWVSGWPQHR
Trigger: CCGATGCTGAGGCCACCCACTGACCCAACTGATCCTGCTCCAGCAGCACACCTCAGCCCCACTGACACCCAGTGTCCTTCCATCTTCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR TCA 90 bp CTGCCTCAGGGAGGGAAGGGAGGTGCATGGAGCCTGCAGGTAAAGTaGTTTCAGTGCTTATGTGTGTGTGCTGGAGGGGCAGCTTCAGGG +
Preference number: 1 (lower is better)
Translates to: LPQGGKGGAWSLQVK*FQCLCVCAGGAASG
Trigger: CCCTGAAGCTGCCCCTCCAGCACACACACATAAGCACTGAAATCACTTTACCTGCAGGCTCCATGCACCTCCCTTCCCTCCCTGAGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR TCA 90 bp GACACTAGAGGCTGTGCAGGGAGACTTCTAGGTGGCCAGCTGGGCTaGGTAAAGGGGAAGGGGAGGGCAGTAGAGCTATTGGGACAAATG +
Preference number: 1 (lower is better)
Translates to: DTRGCAGRLLGGQLG*VKGKGRAVELLGQM
Trigger: CATTTGTCCCAATAGCTCTACTGCCCTCCCCTTCCCCTTTACTCAGCCCAGCTGGCCACCTAGAAGTCTCCCTGCACAGCCTCTAGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR CCA 90 bp TCAGCAACATTGGCCTGGCAAACCAGTGTGAAGATGGAAGGACACTaGGTGTCAGTGGGGCTGAGGTGTGCTGCTGGAGCAGGATCAGTT +
Preference number: 1 (lower is better)
Translates to: SATLAWQTSVKMEGH*VSVGLRCAAGAGSV
Trigger: AACTGATCCTGCTCCAGCAGCACACCTCAGCCCCACTGACACCCAGTGTCCTTCCATCTTCACACTGGTTTGCCAGGCCAATGTTGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR TCA 90 bp CTTTGGATGGCTCAAGTCTTTTGCTCTGAAGACAGGAGACAGAAGTaGGGACCTAAGCCTGCAGGTGCAATGATGGGGCAGAGGGCAGGC +
Preference number: 1 (lower is better)
Translates to: LWMAQVFCSEDRRQK*GPKPAGAMMGQRAG
Trigger: GCCTGCCCTCTGCCCCATCATTGCACCTGCAGGCTTAGGTCCTCACTTCTGTCTCCTGTCTTCAGAGCAAAAGACTTGAGCCATCCAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR GCA 90 bp GTACATAATGAGATGGAGCTGATCCTGCATGCTCAGTCAGTGCCTTaGATGTTCCACTGCCAAGATCACAGGGACACTTCCCCACACTGT +
Preference number: 1 (lower is better)
Translates to: VHNEMELILHAQSVP*MFHCQDHRDTSPHC
Trigger: ACAGTGTGGGGAAGTGTCCCTGTGATCTTGGCAGTGGAACATGCAAGGCACTGACTGAGCATGCAGGATCAGCTCCATCTCATTATGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337400.6
3UTR TCA 90 bp TTTTTCCTGTCTCCACCTCTATCTACGTACATAATGAGATGGAGCTaGTCCTGCATGCTCAGTCAGTGCCTTGCATGTTCCACTGCCAAG +
Preference number: 1 (lower is better)
Translates to: FFLSPPLSTYIMRWS*SCMLSQCLACSTAK
Trigger: CTTGGCAGTGGAACATGCAAGGCACTGACTGAGCATGCAGGATCAGCTCCATCTCATTATGTACGTAGATAGAGGTGGAGACAGGAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337400.6
3UTR CCA 90 bp GAAATAATACAAAACATCTCACAGAATAAGAAAGGAGGACAGACGTaGGGGGTGGAGAGAGAAAGGGAGGGCAAGGGAGAAGGGAAGAGA +
Preference number: 1 (lower is better)
Translates to: EIIQNISQNKKGGQT*GVEREREGKGEGKR
Trigger: TCTCTTCCCTTCTCCCTTGCCCTCCCTTTCTCTCTCCACCCCCCACGTCTGTCCTCCTTTCTTATTCTGTGAGATGTTTTGTATTATTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR CCA 90 bp GCAGAGAGTGATCCTGGGGCATGGAAGGGAGGCTGCAGCGCCCGTAGGGGCAGGGGGCAGTGGGAGTGCTaGCGGAAGGCCTGCCCCGAG +
Preference number: 2 (lower is better)
Translates to: AESDPGAWKGGCSARRGRGQWEC*RKACPE
Trigger: CTCGGGGCAGGCCTTCCGCCAGCACTCCCACTGCCC...CCTGCCCCTACGGGCGCTGCAGCCTCCCTTCCATGCCCCAGGATCACTCTCTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR TCA 90 bp GCAGAGAGTGATCCTGGGGCATGGAAGGGAGGCTGCAGCGCCCGTAGGGGCAGGAGCCTGCAGGTGCAATaGTGGGGCAGAGGGCAGGCC +
Preference number: 2 (lower is better)
Translates to: AESDPGAWKGGCSARRGRSLQVQ*WGRGQA
Trigger: GGCCTGCCCTCTGCCCCATCATTGCACCTGCAGGCT...CCTGCCCCTACGGGCGCTGCAGCCTCCCTTCCATGCCCCAGGATCACTCTCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR TCA 90 bp GCAGAGAGTGATCCTGGGGCATGGAAGGGAGGCTGCAGCGCCCGTAGGGGCAGGCCTGGCCCTGGATGCTaGCACAATGTGGGCGGCTGC +
Preference number: 2 (lower is better)
Translates to: AESDPGAWKGGCSARRGRPGPGC*HNVGGC
Trigger: GCAGCCGCCCACATTGTGTCAGCATCCAGGGCCAGG...CCTGCCCCTACGGGCGCTGCAGCCTCCCTTCCATGCCCCAGGATCACTCTCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR GCA 90 bp GCAGAGAGTGATCCTGGGGCATGGAAGGGAGGCTGCAGCGCCCGTAGGGGCAGGCCCACTGGGAGCAGGTaGTGGGCTGACCCACCAGGA +
Preference number: 2 (lower is better)
Translates to: AESDPGAWKGGCSARRGRPTGSR*WADPPG
Trigger: TCCTGGTGGGTCAGCCCAGCACCTGCTCCCAGTGGG...CCTGCCCCTACGGGCGCTGCAGCCTCCCTTCCATGCCCCAGGATCACTCTCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR CCA 90 bp GCAGAGAGTGATCCTGGGGCATGGAAGGGAGGCTGCAGCGCCCGTAGGGGCAGGCCAGCGGTGTGGGACTaGTCCCACAAGGTCCCCGGA +
Preference number: 2 (lower is better)
Translates to: AESDPGAWKGGCSARRGRPAVWD*SHKVPG
Trigger: TCCGGGGACCTTGTGGGACCAGTCCCACACCGCTGG...CCTGCCCCTACGGGCGCTGCAGCCTCCCTTCCATGCCCCAGGATCACTCTCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR TCA 90 bp CTACTTCCAAGCTGGGAGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAGCCTGCAGGTGCAATaGTGGGGCAGAGGGCAGGCC +
Preference number: 2 (lower is better)
Translates to: LLPSWESAVQRPVQGAISSLQVQ*WGRGQA
Trigger: GGCCTGCCCTCTGCCCCATCATTGCACCTGCAGGCT...GCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCTCCCAGCTTGGAAGTAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR GCA 90 bp GGGCCCACCTGGAGGGAACCCTGCCTACTTCCAAGCTGGGAGAGTGCCGTCCAGGCGATCGTGGGACTCTaGTGCTCCAGGCCGGGTGCT +
Preference number: 2 (lower is better)
Translates to: GPTWREPCLLPSWESAVQAIVGL*CSRPGA
Trigger: AGCACCCGGCCTGGAGCAGCAGAGTCCCACGATCGC...CTGGACGGCACTCTCCCAGCTTGGAAGTAGGCAGGGTTCCCTCCAGGTGGGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR CCA 90 bp GCAGAGAGTGATCCTGGGGCATGGAAGGGAGGCTGCAGCGCCCGTAGGGGCAGGACTGGGAGCAGGTGCTaGGCTGACCCACCAGGACCT +
Preference number: 2 (lower is better)
Translates to: AESDPGAWKGGCSARRGRTGSRC*ADPPGP
Trigger: AGGTCCTGGTGGGTCAGCCCAGCACCTGCTCCCAGT...CCTGCCCCTACGGGCGCTGCAGCCTCCCTTCCATGCCCCAGGATCACTCTCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR GCA 90 bp CTACTTCCAAGCTGGGAGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCCTGCTCCAGGCCGGGTaGTCAAGGGCTGGTCAATGG +
Preference number: 2 (lower is better)
Translates to: LLPSWESAVQRPVQGAISLLQAG*SRAGQW
Trigger: CCATTGACCAGCCCTTGAGCACCCGGCCTGGAGCAG...GCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCTCCCAGCTTGGAAGTAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR GCA 90 bp AACCCCCATCAGCTGGGTAGGTGGGGAGCGGGAAGAATCCTGCCAGCAGAGAGTTGCTGGCGGAAGGCCTaGCCCGAGCTCTCCCTGGCC +
Preference number: 2 (lower is better)
Translates to: NPHQLGRWGAGRILPAESCWRKA*PELSLA
Trigger: GGCCAGGGAGAGCTCGGGGCAGGCCTTCCGCCAGCA...ACTCTCTGCTGGCAGGATTCTTCCCGCTCCCCACCTACCCAGCTGATGGGGGTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR CCA 90 bp GAGGGAACCCTGCCTACTTCCAAGCTGGGAGAGTGCCGTCCAGCGGCCAGTGCAGGGCCCCTCCAGTGCTaGCCCCATTGGAGTCTGCAG +
Preference number: 2 (lower is better)
Translates to: EGTLPTSKLGECRPAASAGPLQC*PHWSLQ
Trigger: CTGCAGACTCCAATGGGGCCAGCACTGGAGGGGCCC...TGCACTGGCCGCTGGACGGCACTCTCCCAGCTTGGAAGTAGGCAGGGTTCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR CCA 90 bp CTACTTCCAAGCTGGGAGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAGTTGGGTCAGTGGGTaGCCTCAGCATCGGAGGGGC +
Preference number: 2 (lower is better)
Translates to: LLPSWESAVQRPVQGAISSWVSG*PQHRRG
Trigger: GCCCCTCCGATGCTGAGGCCACCCACTGACCCAACT...GCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCTCCCAGCTTGGAAGTAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR CCA 90 bp GCAGAGAGTGATCCTGGGGCATGGAAGGGAGGCTGCAGCGCCCGTAGGGGCAGGTCCTCTTCAGTGAGGTaGGGGCCCACCTGGAGGGAA +
Preference number: 2 (lower is better)
Translates to: AESDPGAWKGGCSARRGRSSSVR*GPTWRE
Trigger: TTCCCTCCAGGTGGGCCCCCACCTCACTGAAGAGGA...CCTGCCCCTACGGGCGCTGCAGCCTCCCTTCCATGCCCCAGGATCACTCTCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR CCA 90 bp AACCCCCATCAGCTGGGTAGGTGGGGAGCGGGAAGAATCCTGCCAGCAGAGAGTGGGCAGTGGGAGTGCTaGCGGAAGGCCTGCCCCGAG +
Preference number: 2 (lower is better)
Translates to: NPHQLGRWGAGRILPAESGQWEC*RKACPE
Trigger: CTCGGGGCAGGCCTTCCGCCAGCACTCCCACTGCCC...ACTCTCTGCTGGCAGGATTCTTCCCGCTCCCCACCTACCCAGCTGATGGGGGTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR TCA 90 bp GTGGGTGGCCTCAGCATCGGAGGGGCAATGACAGTCTTGGGGAGGCATCTGGCTAGCCTGCAGGTGCAATaGTGGGGCAGAGGGCAGGCC +
Preference number: 2 (lower is better)
Translates to: VGGLSIGGAMTVLGRHLASLQVQ*WGRGQA
Trigger: GGCCTGCCCTCTGCCCCATCATTGCACCTGCAGGCT...AGCCAGATGCCTCCCCAAGACTGTCATTGCCCCTCCGATGCTGAGGCCACCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR TCA 90 bp AACCCCCATCAGCTGGGTAGGTGGGGAGCGGGAAGAATCCTGCCAGCAGAGAGTGAGCTCTCCCTGGCCTaGCCCCAGGACTCAGACCCC +
Preference number: 2 (lower is better)
Translates to: NPHQLGRWGAGRILPAESELSLA*PQDSDP
Trigger: GGGGTCTGAGTCCTGGGGTCAGGCCAGGGAGAGCTC...ACTCTCTGCTGGCAGGATTCTTCCCGCTCCCCACCTACCCAGCTGATGGGGGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR GCA 90 bp GGGCCCACCTGGAGGGAACCCTGCCTACTTCCAAGCTGGGAGAGTGCCGTCCAGATCGTGGGACTCTGCTaGTCCAGGCCGGGTGCTCAA +
Preference number: 2 (lower is better)
Translates to: GPTWREPCLLPSWESAVQIVGLC*SRPGAQ
Trigger: TTGAGCACCCGGCCTGGAGCAGCAGAGTCCCACGAT...CTGGACGGCACTCTCCCAGCTTGGAAGTAGGCAGGGTTCCCTCCAGGTGGGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR GCA 90 bp GCAGAGAGTGATCCTGGGGCATGGAAGGGAGGCTGCAGCGCCCGTAGGGGCAGGAGTGGGGCTGAGGTGTaGTGCTGGAGCAGGATCAGT +
Preference number: 2 (lower is better)
Translates to: AESDPGAWKGGCSARRGRSGAEV*CWSRIS
Trigger: ACTGATCCTGCTCCAGCAGCACACCTCAGCCCCACT...CCTGCCCCTACGGGCGCTGCAGCCTCCCTTCCATGCCCCAGGATCACTCTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR GCA 90 bp AACCCCCATCAGCTGGGTAGGTGGGGAGCGGGAAGAATCCTGCCAGCAGAGAGTTGGCCCAGCCCTGCCTaGTCACCTGCAGGCCCCTCT +
Preference number: 2 (lower is better)
Translates to: NPHQLGRWGAGRILPAESWPSPA*SPAGPS
Trigger: AGAGGGGCCTGCAGGTGAGCAGGCAGGGCTGGGCCA...ACTCTCTGCTGGCAGGATTCTTCCCGCTCCCCACCTACCCAGCTGATGGGGGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR CCA 90 bp GTGGGTGGCCTCAGCATCGGAGGGGCAATGACAGTCTTGGGGAGGCATCTGGCTGGGCCCCTCCAGTGCTaGCCCCATTGGAGTCTGCAG +
Preference number: 2 (lower is better)
Translates to: VGGLSIGGAMTVLGRHLAGPLQC*PHWSLQ
Trigger: CTGCAGACTCCAATGGGGCCAGCACTGGAGGGGCCC...AGCCAGATGCCTCCCCAAGACTGTCATTGCCCCTCCGATGCTGAGGCCACCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR CCA 90 bp TGGGAGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGAGGAAGAGAGCTGGCTaGAGGAAGCGGGAGAGAGGG +
Preference number: 2 (lower is better)
Translates to: WESAVQRPVQGAISNIGLRKRAG*RKRERG
Trigger: CCCTCTCTCCCGCTTCCTCCAGCCAGCTCTCTTCCT...CAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCTCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR CCA 90 bp AGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAAGTTGGGTCAGTGGGTaGCCTCAGCATCGGAGGGGC +
Preference number: 2 (lower is better)
Translates to: RVPSSGQCRGPSATLAWQSWVSG*PQHRRG
Trigger: GCCCCTCCGATGCTGAGGCCACCCACTGACCCAACT...TTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR CCA 90 bp GCAGAGAGTGATCCTGGGGCATGGAAGGGAGGCTGCAGCGCCCGTAGGGGCAGGGCTGAGGTGTGCTGCTaGAGCAGGATCAGTTGGGTC +
Preference number: 2 (lower is better)
Translates to: AESDPGAWKGGCSARRGRAEVCC*SRISWV
Trigger: GACCCAACTGATCCTGCTCCAGCAGCACACCTCAGC...CCTGCCCCTACGGGCGCTGCAGCCTCCCTTCCATGCCCCAGGATCACTCTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR CCA 90 bp GCAGAGAGTGATCCTGGGGCATGGAAGGGAGGCTGCAGCGCCCGTAGGGGCAGGGGGCCTGAACTCCCGTaGAGCCAGCTAGAGAAAGGA +
Preference number: 2 (lower is better)
Translates to: AESDPGAWKGGCSARRGRGPELP*SQLEKG
Trigger: TCCTTTCTCTAGCTGGCTCCACGGGAGTTCAGGCCC...CCTGCCCCTACGGGCGCTGCAGCCTCCCTTCCATGCCCCAGGATCACTCTCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR TCA 90 bp GGGCCCACCTGGAGGGAACCCTGCCTACTTCCAAGCTGGGAGAGTGCCGTCCAGTGGGTGTCATGTGTCTaGGGGCGATCGTGGGACTCT +
Preference number: 2 (lower is better)
Translates to: GPTWREPCLLPSWESAVQWVSCV*GRSWDS
Trigger: AGAGTCCCACGATCGCCCTCAGACACATGACACCCA...CTGGACGGCACTCTCCCAGCTTGGAAGTAGGCAGGGTTCCCTCCAGGTGGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR TCA 90 bp AGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAACCAGTGTGAAGAGCCTGCAGGTGCAATaGTGGGGCAGAGGGCAGGCC +
Preference number: 2 (lower is better)
Translates to: SGQCRGPSATLAWQTSVKSLQVQ*WGRGQA
Trigger: GGCCTGCCCTCTGCCCCATCATTGCACCTGCAGGCT...CTTCACACTGGTTTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR TCA 90 bp GCAGAGAGTGATCCTGGGGCATGGAAGGGAGGCTGCAGCGCCCGTAGGGGCAGGGACAGGAGACAGAAGTaGGGACCTAAGCCTGCAGGT +
Preference number: 2 (lower is better)
Translates to: AESDPGAWKGGCSARRGRDRRQK*GPKPAG
Trigger: ACCTGCAGGCTTAGGTCCTCACTTCTGTCTCCTGTC...CCTGCCCCTACGGGCGCTGCAGCCTCCCTTCCATGCCCCAGGATCACTCTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR TCA 90 bp AGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAGCATCGGAGGGGCAATaGCAGTCTTGGGGAGGCATC +
Preference number: 2 (lower is better)
Translates to: RVPSSGQCRGPSATLAWQASEGQ*QSWGGI
Trigger: GATGCCTCCCCAAGACTGTCATTGCCCCTCCGATGC...TTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR TCA 90 bp AACCCCCATCAGCTGGGTAGGTGGGGAGCGGGAAGAATCCTGCCAGCAGAGAGTCCTGGCCCTGGATGCTaGCACAATGTGGGCGGCTGC +
Preference number: 2 (lower is better)
Translates to: NPHQLGRWGAGRILPAESPGPGC*HNVGGC
Trigger: GCAGCCGCCCACATTGTGTCAGCATCCAGGGCCAGG...ACTCTCTGCTGGCAGGATTCTTCCCGCTCCCCACCTACCCAGCTGATGGGGGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR GCA 90 bp GCAGAGAGTGATCCTGGGGCATGGAAGGGAGGCTGCAGCGCCCGTAGGGGCAGGAGTCAGTCCAGGCCATaGTTAGCCTTCCCTGGAACC +
Preference number: 2 (lower is better)
Translates to: AESDPGAWKGGCSARRGRSQSRP*LAFPGT
Trigger: GGTTCCAGGGAAGGCTAAGCATGGCCTGGACTGACT...CCTGCCCCTACGGGCGCTGCAGCCTCCCTTCCATGCCCCAGGATCACTCTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR GCA 90 bp CTACTTCCAAGCTGGGAGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAGTGGGGCTGAGGTGTaGTGCTGGAGCAGGATCAGT +
Preference number: 2 (lower is better)
Translates to: LLPSWESAVQRPVQGAISSGAEV*CWSRIS
Trigger: ACTGATCCTGCTCCAGCAGCACACCTCAGCCCCACT...GCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCTCCCAGCTTGGAAGTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR CCA 90 bp CGTGGGACTCTGCTGCTCCAGGCCGGGTGCTCAAGGGCTGGTCAATGGAAAAGTGGGCCCCTCCAGTGCTaGCCCCATTGGAGTCTGCAG +
Preference number: 2 (lower is better)
Translates to: RGTLLLQAGCSRAGQWKSGPLQC*PHWSLQ
Trigger: CTGCAGACTCCAATGGGGCCAGCACTGGAGGGGCCC...ACTTTTCCATTGACCAGCCCTTGAGCACCCGGCCTGGAGCAGCAGAGTCCCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR CCA 90 bp CCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAACCAGTAGGAAGAGAGCTGGCTaGAGGAAGCGGGAGAGAGGG +
Preference number: 2 (lower is better)
Translates to: PSSGQCRGPSATLAWQTSRKRAG*RKRERG
Trigger: CCCTCTCTCCCGCTTCCTCCAGCCAGCTCTCTTCCT...ACTGGTTTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR CCA 90 bp CTACTTCCAAGCTGGGAGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCTGGAGCAGGATCAGTTaGGTCAGTGGGTGGCCTCAG +
Preference number: 2 (lower is better)
Translates to: LLPSWESAVQRPVQGAISWSRIS*VSGWPQ
Trigger: CTGAGGCCACCCACTGACCCAACTGATCCTGCTCCA...GCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCTCCCAGCTTGGAAGTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR CCA 90 bp GGGCCCACCTGGAGGGAACCCTGCCTACTTCCAAGCTGGGAGAGTGCCGTCCAGTGGAGCAGGATCAGTTaGGTCAGTGGGTGGCCTCAG +
Preference number: 2 (lower is better)
Translates to: GPTWREPCLLPSWESAVQWSRIS*VSGWPQ
Trigger: CTGAGGCCACCCACTGACCCAACTGATCCTGCTCCA...CTGGACGGCACTCTCCCAGCTTGGAAGTAGGCAGGGTTCCCTCCAGGTGGGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR CCA 90 bp TGGGAGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCTGAGGTGTGCTGCTaGAGCAGGATCAGTTGGGTC +
Preference number: 2 (lower is better)
Translates to: WESAVQRPVQGAISNIGLAEVCC*SRISWV
Trigger: GACCCAACTGATCCTGCTCCAGCAGCACACCTCAGC...CAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCTCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR CCA 90 bp AACCCCCATCAGCTGGGTAGGTGGGGAGCGGGAAGAATCCTGCCAGCAGAGAGTCCAGCGGTGTGGGACTaGTCCCACAAGGTCCCCGGA +
Preference number: 2 (lower is better)
Translates to: NPHQLGRWGAGRILPAESPAVWD*SHKVPG
Trigger: TCCGGGGACCTTGTGGGACCAGTCCCACACCGCTGG...ACTCTCTGCTGGCAGGATTCTTCCCGCTCCCCACCTACCCAGCTGATGGGGGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR CCA 90 bp AACCCCCATCAGCTGGGTAGGTGGGGAGCGGGAAGAATCCTGCCAGCAGAGAGTCGTAGGGGCAGGGGCTaGGCACTTCCACCCAGAGTC +
Preference number: 2 (lower is better)
Translates to: NPHQLGRWGAGRILPAESRRGRG*ALPPRV
Trigger: GACTCTGGGTGGAAGTGCCCAGCCCCTGCCCCTACG...ACTCTCTGCTGGCAGGATTCTTCCCGCTCCCCACCTACCCAGCTGATGGGGGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR TCA 90 bp CCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAACCAGTTGGGTGTCATGTGTCTaGGGGCGATCGTGGGACTCT +
Preference number: 2 (lower is better)
Translates to: PSSGQCRGPSATLAWQTSWVSCV*GRSWDS
Trigger: AGAGTCCCACGATCGCCCTCAGACACATGACACCCA...ACTGGTTTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR TCA 90 bp CTACTTCCAAGCTGGGAGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCCCTGGCAAACCAGTGTaGAGATGGAAGGACACTGGG +
Preference number: 2 (lower is better)
Translates to: LLPSWESAVQRPVQGAISPGKPV*RWKDTG
Trigger: CCCAGTGTCCTTCCATCTTCACACTGGTTTGCCAGG...GCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCTCCCAGCTTGGAAGTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR GCA 90 bp AGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAACCAGTGTGAAGCTGCTCCAGGCCGGGTaGTCAAGGGCTGGTCAATGG +
Preference number: 2 (lower is better)
Translates to: SGQCRGPSATLAWQTSVKLLQAG*SRAGQW
Trigger: CCATTGACCAGCCCTTGAGCACCCGGCCTGGAGCAG...CTTCACACTGGTTTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR GCA 90 bp CTACTTCCAAGCTGGGAGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAGTCAGTCCAGGCCATaGTTAGCCTTCCCTGGAACC +
Preference number: 2 (lower is better)
Translates to: LLPSWESAVQRPVQGAISSQSRP*LAFPGT
Trigger: GGTTCCAGGGAAGGCTAAGCATGGCCTGGACTGACT...GCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCTCCCAGCTTGGAAGTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR GCA 90 bp GGGCCCACCTGGAGGGAACCCTGCCTACTTCCAAGCTGGGAGAGTGCCGTCCAGAGTCAGTCCAGGCCATaGTTAGCCTTCCCTGGAACC +
Preference number: 2 (lower is better)
Translates to: GPTWREPCLLPSWESAVQSQSRP*LAFPGT
Trigger: GGTTCCAGGGAAGGCTAAGCATGGCCTGGACTGACT...CTGGACGGCACTCTCCCAGCTTGGAAGTAGGCAGGGTTCCCTCCAGGTGGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR GCA 90 bp GGGCCCACCTGGAGGGAACCCTGCCTACTTCCAAGCTGGGAGAGTGCCGTCCAGATGACTATAGGGGGCTaGAGTCAGTCCAGGCCATGC +
Preference number: 2 (lower is better)
Translates to: GPTWREPCLLPSWESAVQMTIGG*SQSRPC
Trigger: GCATGGCCTGGACTGACTGCAGCCCCCTATAGTCAT...CTGGACGGCACTCTCCCAGCTTGGAAGTAGGCAGGGTTCCCTCCAGGTGGGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR GCA 90 bp AACCCCCATCAGCTGGGTAGGTGGGGAGCGGGAAGAATCCTGCCAGCAGAGAGTTCCAAGCTGGGAGAGTaGCGTCCAGCGGCCAGTGCA +
Preference number: 2 (lower is better)
Translates to: NPHQLGRWGAGRILPAESSKLGE*RPAASA
Trigger: TGCACTGGCCGCTGGACGGCACTCTCCCAGCTTGGA...ACTCTCTGCTGGCAGGATTCTTCCCGCTCCCCACCTACCCAGCTGATGGGGGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR CCA 90 bp CTACTTCCAAGCTGGGAGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAAGATGGAAGGACACTaGGTGTCAGTGGGGCTGAGG +
Preference number: 2 (lower is better)
Translates to: LLPSWESAVQRPVQGAISKMEGH*VSVGLR
Trigger: CCTCAGCCCCACTGACACCCAGTGTCCTTCCATCTT...GCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCTCCCAGCTTGGAAGTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR CCA 90 bp AACCCCCATCAGCTGGGTAGGTGGGGAGCGGGAAGAATCCTGCCAGCAGAGAGTCAGGGACCAGCGGTGTaGGACTGGTCCCACAAGGTC +
Preference number: 2 (lower is better)
Translates to: NPHQLGRWGAGRILPAESQGPAV*DWSHKV
Trigger: GACCTTGTGGGACCAGTCCCACACCGCTGGTCCCTG...ACTCTCTGCTGGCAGGATTCTTCCCGCTCCCCACCTACCCAGCTGATGGGGGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR CAA 90 bp GGGAGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATaGGCCTGGCAAACCAGTGTGAAGATGGAAGGACACTGGGTGTCA +
Preference number: 2 (lower is better)
Translates to: GRVPSSGQCRGPSAT*AWQTSVKMEGHWVS
Trigger: TGACACCCAGTGTCCTTCCATCTTCACACTGGTTTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR TCA 90 bp GAGGGAACCCTGCCTACTTCCAAGCTGGGAGAGTGCCGTCCAGCGGCCAGTGCAGACAGGAGACAGAAGTaGGGACCTAAGCCTGCAGGT +
Preference number: 2 (lower is better)
Translates to: EGTLPTSKLGECRPAASADRRQK*GPKPAG
Trigger: ACCTGCAGGCTTAGGTCCTCACTTCTGTCTCCTGTC...TGCACTGGCCGCTGGACGGCACTCTCCCAGCTTGGAAGTAGGCAGGGTTCCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR TCA 90 bp CCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAACCAGTGACAGGAGACAGAAGTaGGGACCTAAGCCTGCAGGT +
Preference number: 2 (lower is better)
Translates to: PSSGQCRGPSATLAWQTSDRRQK*GPKPAG
Trigger: ACCTGCAGGCTTAGGTCCTCACTTCTGTCTCCTGTC...ACTGGTTTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR TCA 90 bp AACCCCCATCAGCTGGGTAGGTGGGGAGCGGGAAGAATCCTGCCAGCAGAGAGTGCATCGGAGGGGCAATaGCAGTCTTGGGGAGGCATC +
Preference number: 2 (lower is better)
Translates to: NPHQLGRWGAGRILPAESASEGQ*QSWGGI
Trigger: GATGCCTCCCCAAGACTGTCATTGCCCCTCCGATGC...ACTCTCTGCTGGCAGGATTCTTCCCGCTCCCCACCTACCCAGCTGATGGGGGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR TCA 90 bp GAGGGAACCCTGCCTACTTCCAAGCTGGGAGAGTGCCGTCCAGCGGCCAGTGCACCTGGCAAACCAGTGTaGAGATGGAAGGACACTGGG +
Preference number: 2 (lower is better)
Translates to: EGTLPTSKLGECRPAASAPGKPV*RWKDTG
Trigger: CCCAGTGTCCTTCCATCTTCACACTGGTTTGCCAGG...TGCACTGGCCGCTGGACGGCACTCTCCCAGCTTGGAAGTAGGCAGGGTTCCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR GCA 90 bp AGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAAGTCAGTCCAGGCCATaGTTAGCCTTCCCTGGAACC +
Preference number: 2 (lower is better)
Translates to: RVPSSGQCRGPSATLAWQSQSRP*LAFPGT
Trigger: GGTTCCAGGGAAGGCTAAGCATGGCCTGGACTGACT...TTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR CCA 90 bp CTACTTCCAAGCTGGGAGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAATGGAAAAGTCATGTaGGTGGGCCCCTCCAGTGCT +
Preference number: 2 (lower is better)
Translates to: LLPSWESAVQRPVQGAISNGKVM*VGPSSA
Trigger: AGCACTGGAGGGGCCCACCCACATGACTTTTCCATT...GCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCTCCCAGCTTGGAAGTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR CCA 90 bp AGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAACCAGTGTGAAGAGGAAGAGAGCTGGCTaGAGGAAGCGGGAGAGAGGG +
Preference number: 2 (lower is better)
Translates to: SGQCRGPSATLAWQTSVKRKRAG*RKRERG
Trigger: CCCTCTCTCCCGCTTCCTCCAGCCAGCTCTCTTCCT...CTTCACACTGGTTTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR CCA 90 bp GTGGGTGGCCTCAGCATCGGAGGGGCAATGACAGTCTTGGGGAGGCATCTGGCTAGACAGGAAGAGAGCTaGCTGGAGGAAGCGGGAGAG +
Preference number: 2 (lower is better)
Translates to: VGGLSIGGAMTVLGRHLARQEES*LEEAGE
Trigger: CTCTCCCGCTTCCTCCAGCCAGCTCTCTTCCTGTCT...AGCCAGATGCCTCCCCAAGACTGTCATTGCCCCTCCGATGCTGAGGCCACCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR CCA 90 bp CCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAACCAGTAAGATGGAAGGACACTaGGTGTCAGTGGGGCTGAGG +
Preference number: 2 (lower is better)
Translates to: PSSGQCRGPSATLAWQTSKMEGH*VSVGLR
Trigger: CCTCAGCCCCACTGACACCCAGTGTCCTTCCATCTT...ACTGGTTTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR CCA 90 bp AACCCCCATCAGCTGGGTAGGTGGGGAGCGGGAAGAATCCTGCCAGCAGAGAGTTCCTCTTCAGTGAGGTaGGGGCCCACCTGGAGGGAA +
Preference number: 2 (lower is better)
Translates to: NPHQLGRWGAGRILPAESSSSVR*GPTWRE
Trigger: TTCCCTCCAGGTGGGCCCCCACCTCACTGAAGAGGA...ACTCTCTGCTGGCAGGATTCTTCCCGCTCCCCACCTACCCAGCTGATGGGGGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR CCA 90 bp CACTGCCAAGATCACAGGGACACTTCCCCACACTGTCAGAGCTCAGGCACAGTGAACCCCCAGGACGACTaGGTGTGCCAGGCCAGCCCA +
Preference number: 2 (lower is better)
Translates to: HCQDHRDTSPHCQSSGTVNPQDD*VCQASP
Trigger: TGGGCTGGCCTGGCACACCCAGTCGTCCTGGGGGTT...CACTGTGCCTGAGCTCTGACAGTGTGGGGAAGTGTCCCTGTGATCTTGGCAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337400.6
3UTR-3UTR GCA 90 bp AGTGCCTTGCATGTTCCACTGCCAAGATCACAGGGACACTTCCCCACACTGTCACAGGACGACTGGGTGTaGCAGGCCAGCCCACCTGCC +
Preference number: 2 (lower is better)
Translates to: SALHVPLPRSQGHFPTLSQDDWV*QASPPA
Trigger: GGCAGGTGGGCTGGCCTGGCACACCCAGTCGTCCTG...TGACAGTGTGGGGAAGTGTCCCTGTGATCTTGGCAGTGGAACATGCAAGGCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337400.6
3UTR-3UTR CCA 90 bp GGGCCCACCTGGAGGGAACCCTGCCTACTTCCAAGCTGGGAGAGTGCCGTCCAGTCAAGGGCTGGTCAATaGAAAAGTCATGTGGGTGGG +
Preference number: 2 (lower is better)
Translates to: GPTWREPCLLPSWESAVQSRAGQ*KSHVGG
Trigger: CCCACCCACATGACTTTTCCATTGACCAGCCCTTGA...CTGGACGGCACTCTCCCAGCTTGGAAGTAGGCAGGGTTCCCTCCAGGTGGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR CCA 90 bp AGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAACCAGTGTGAAGAGACAGGAAGAGAGCTaGCTGGAGGAAGCGGGAGAG +
Preference number: 2 (lower is better)
Translates to: SGQCRGPSATLAWQTSVKRQEES*LEEAGE
Trigger: CTCTCCCGCTTCCTCCAGCCAGCTCTCTTCCTGTCT...CTTCACACTGGTTTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR CCA 90 bp AGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAACCAGTGTGAAGGCTGAGGTGTGCTGCTaGAGCAGGATCAGTTGGGTC +
Preference number: 2 (lower is better)
Translates to: SGQCRGPSATLAWQTSVKAEVCC*SRISWV
Trigger: GACCCAACTGATCCTGCTCCAGCAGCACACCTCAGC...CTTCACACTGGTTTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR CCA 90 bp AACCCCCATCAGCTGGGTAGGTGGGGAGCGGGAAGAATCCTGCCAGCAGAGAGTTGCGCCGCTCAGACATaGCATGCCCAGCTGTGCTTT +
Preference number: 2 (lower is better)
Translates to: NPHQLGRWGAGRILPAESCAAQT*HAQLCF
Trigger: AAAGCACAGCTGGGCATGCCATGTCTGAGCGGCGCA...ACTCTCTGCTGGCAGGATTCTTCCCGCTCCCCACCTACCCAGCTGATGGGGGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR TCA 90 bp AACCCCCATCAGCTGGGTAGGTGGGGAGCGGGAAGAATCCTGCCAGCAGAGAGTGACAGGAGACAGAAGTaGGGACCTAAGCCTGCAGGT +
Preference number: 2 (lower is better)
Translates to: NPHQLGRWGAGRILPAESDRRQK*GPKPAG
Trigger: ACCTGCAGGCTTAGGTCCTCACTTCTGTCTCCTGTC...ACTCTCTGCTGGCAGGATTCTTCCCGCTCCCCACCTACCCAGCTGATGGGGGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR GCA 90 bp AACCCCCATCAGCTGGGTAGGTGGGGAGCGGGAAGAATCCTGCCAGCAGAGAGTATGACTATAGGGGGCTaGAGTCAGTCCAGGCCATGC +
Preference number: 2 (lower is better)
Translates to: NPHQLGRWGAGRILPAESMTIGG*SQSRPC
Trigger: GCATGGCCTGGACTGACTGCAGCCCCCTATAGTCAT...ACTCTCTGCTGGCAGGATTCTTCCCGCTCCCCACCTACCCAGCTGATGGGGGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR CCA 90 bp GAGGGAACCCTGCCTACTTCCAAGCTGGGAGAGTGCCGTCCAGCGGCCAGTGCATCAAGGGCTGGTCAATaGAAAAGTCATGTGGGTGGG +
Preference number: 2 (lower is better)
Translates to: EGTLPTSKLGECRPAASASRAGQ*KSHVGG
Trigger: CCCACCCACATGACTTTTCCATTGACCAGCCCTTGA...TGCACTGGCCGCTGGACGGCACTCTCCCAGCTTGGAAGTAGGCAGGGTTCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR CCA 90 bp AAGGGGAGGGCAGTAGAGCTATTGGGACAAATGGACATCAGAATGAACAGGCTCGGGCAGTGGGAGTGCTaGCGGAAGGCCTGCCCCGAG +
Preference number: 2 (lower is better)
Translates to: KGRAVELLGQMDIRMNRLGQWEC*RKACPE
Trigger: CTCGGGGCAGGCCTTCCGCCAGCACTCCCACTGCCC...GAGCCTGTTCATTCTGATGTCCATTTGTCCCAATAGCTCTACTGCCCTCCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR TCA 90 bp GAAGGGAGGTGCATGGAGCCTGCAGGTAAAGTGATTTCAGTGCTTATGTGTGTGAGGGGGAGTGGGGCCTaGACTCCCGTGGAGCCAGCT +
Preference number: 2 (lower is better)
Translates to: EGRCMEPAGKVISVLMCVRGSGA*TPVEPA
Trigger: AGCTGGCTCCACGGGAGTTCAGGCCCCACTCCCCCT...CACACACATAAGCACTGAAATCACTTTACCTGCAGGCTCCATGCACCTCCCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR TCA 90 bp GCAGAGAGTGATCCTGGGGCATGGAAGGGAGGCTGCAGCGCCCGTAGGGGCAGGAAATGGACATCAGAATaGACAGGCTCAGTTTATCCC +
Preference number: 2 (lower is better)
Translates to: AESDPGAWKGGCSARRGRKWTSE*TGSVYP
Trigger: GGGATAAACTGAGCCTGTTCATTCTGATGTCCATTT...CCTGCCCCTACGGGCGCTGCAGCCTCCCTTCCATGCCCCAGGATCACTCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR GCA 90 bp GGGCCCACCTGGAGGGAACCCTGCCTACTTCCAAGCTGGGAGAGTGCCGTCCAGATGGCTCAAGTCTTTTaGTCTGAAGACAGGAGACAG +
Preference number: 2 (lower is better)
Translates to: GPTWREPCLLPSWESAVQMAQVF*SEDRRQ
Trigger: CTGTCTCCTGTCTTCAGAGCAAAAGACTTGAGCCAT...CTGGACGGCACTCTCCCAGCTTGGAAGTAGGCAGGGTTCCCTCCAGGTGGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR GCA 90 bp GAAGGGAGGTGCATGGAGCCTGCAGGTAAAGTGATTTCAGTGCTTATGTGTGTGGCGATCGTGGGACTCTaGTGCTCCAGGCCGGGTGCT +
Preference number: 2 (lower is better)
Translates to: EGRCMEPAGKVISVLMCVAIVGL*CSRPGA
Trigger: AGCACCCGGCCTGGAGCAGCAGAGTCCCACGATCGC...CACACACATAAGCACTGAAATCACTTTACCTGCAGGCTCCATGCACCTCCCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR GCA 90 bp CCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAACCAGTATGGCTCAAGTCTTTTaGTCTGAAGACAGGAGACAG +
Preference number: 2 (lower is better)
Translates to: PSSGQCRGPSATLAWQTSMAQVF*SEDRRQ
Trigger: CTGTCTCCTGTCTTCAGAGCAAAAGACTTGAGCCAT...ACTGGTTTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR CCA 90 bp AGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAACCAGTGTGAAGTCAAGGGCTGGTCAATaGAAAAGTCATGTGGGTGGG +
Preference number: 2 (lower is better)
Translates to: SGQCRGPSATLAWQTSVKSRAGQ*KSHVGG
Trigger: CCCACCCACATGACTTTTCCATTGACCAGCCCTTGA...CTTCACACTGGTTTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR TCA 90 bp GAAGGGAGGTGCATGGAGCCTGCAGGTAAAGTGATTTCAGTGCTTATGTGTGTGCTTGCTCCTCTTCAGTaGGGTGGGGGCCCACCTGGA +
Preference number: 2 (lower is better)
Translates to: EGRCMEPAGKVISVLMCVLAPLQ*GGGPPG
Trigger: TCCAGGTGGGCCCCCACCTCACTGAAGAGGAGCAAG...CACACACATAAGCACTGAAATCACTTTACCTGCAGGCTCCATGCACCTCCCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR TCA 90 bp AAGGGGAGGGCAGTAGAGCTATTGGGACAAATGGACATCAGAATGAACAGGCTCCTTGCTCCTCTTCAGTaGGGTGGGGGCCCACCTGGA +
Preference number: 2 (lower is better)
Translates to: KGRAVELLGQMDIRMNRLLAPLQ*GGGPPG
Trigger: TCCAGGTGGGCCCCCACCTCACTGAAGAGGAGCAAG...GAGCCTGTTCATTCTGATGTCCATTTGTCCCAATAGCTCTACTGCCCTCCCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR GCA 90 bp GAAGGGAGGTGCATGGAGCCTGCAGGTAAAGTGATTTCAGTGCTTATGTGTGTGCTGCTCCAGGCCGGGTaGTCAAGGGCTGGTCAATGG +
Preference number: 2 (lower is better)
Translates to: EGRCMEPAGKVISVLMCVLLQAG*SRAGQW
Trigger: CCATTGACCAGCCCTTGAGCACCCGGCCTGGAGCAG...CACACACATAAGCACTGAAATCACTTTACCTGCAGGCTCCATGCACCTCCCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR CCA 90 bp GAAGGGAGGTGCATGGAGCCTGCAGGTAAAGTGATTTCAGTGCTTATGTGTGTGAGTTGGGTCAGTGGGTaGCCTCAGCATCGGAGGGGC +
Preference number: 2 (lower is better)
Translates to: EGRCMEPAGKVISVLMCVSWVSG*PQHRRG
Trigger: GCCCCTCCGATGCTGAGGCCACCCACTGACCCAACT...CACACACATAAGCACTGAAATCACTTTACCTGCAGGCTCCATGCACCTCCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR GCA 90 bp AAGGGGAGGGCAGTAGAGCTATTGGGACAAATGGACATCAGAATGAACAGGCTCATCGTGGGACTCTGCTaGTCCAGGCCGGGTGCTCAA +
Preference number: 2 (lower is better)
Translates to: KGRAVELLGQMDIRMNRLIVGLC*SRPGAQ
Trigger: TTGAGCACCCGGCCTGGAGCAGCAGAGTCCCACGAT...GAGCCTGTTCATTCTGATGTCCATTTGTCCCAATAGCTCTACTGCCCTCCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR GCA 90 bp AAGGGGAGGGCAGTAGAGCTATTGGGACAAATGGACATCAGAATGAACAGGCTCCTCTGGGTTCTCACCTaGCTCAGGGAGGGAAGGGAG +
Preference number: 2 (lower is better)
Translates to: KGRAVELLGQMDIRMNRLLWVLT*LREGRE
Trigger: CTCCCTTCCCTCCCTGAGGCAGGTGAGAACCCAGAG...GAGCCTGTTCATTCTGATGTCCATTTGTCCCAATAGCTCTACTGCCCTCCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR CCA 90 bp AAGGGGAGGGCAGTAGAGCTATTGGGACAAATGGACATCAGAATGAACAGGCTCTGCCTACTTCCAAGCTaGGAGAGTGCCGTCCAGCGG +
Preference number: 2 (lower is better)
Translates to: KGRAVELLGQMDIRMNRLCLLPS*ESAVQR
Trigger: CCGCTGGACGGCACTCTCCCAGCTTGGAAGTAGGCA...GAGCCTGTTCATTCTGATGTCCATTTGTCCCAATAGCTCTACTGCCCTCCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR CCA 90 bp GAAGGGAGGTGCATGGAGCCTGCAGGTAAAGTGATTTCAGTGCTTATGTGTGTGTCCTCTTCAGTGAGGTaGGGGCCCACCTGGAGGGAA +
Preference number: 2 (lower is better)
Translates to: EGRCMEPAGKVISVLMCVSSSVR*GPTWRE
Trigger: TTCCCTCCAGGTGGGCCCCCACCTCACTGAAGAGGA...CACACACATAAGCACTGAAATCACTTTACCTGCAGGCTCCATGCACCTCCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR CCA 90 bp AAGGGGAGGGCAGTAGAGCTATTGGGACAAATGGACATCAGAATGAACAGGCTCTGTGAGGCCAGGCCCTaGCCCTGGATGCTGACACAA +
Preference number: 2 (lower is better)
Translates to: KGRAVELLGQMDIRMNRLCEARP*PWMLTQ
Trigger: TTGTGTCAGCATCCAGGGCCAGGGCCTGGCCTCACA...GAGCCTGTTCATTCTGATGTCCATTTGTCCCAATAGCTCTACTGCCCTCCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR CCA 90 bp GAAGGGAGGTGCATGGAGCCTGCAGGTAAAGTGATTTCAGTGCTTATGTGTGTGTGTGAGGCCAGGCCCTaGCCCTGGATGCTGACACAA +
Preference number: 2 (lower is better)
Translates to: EGRCMEPAGKVISVLMCVCEARP*PWMLTQ
Trigger: TTGTGTCAGCATCCAGGGCCAGGGCCTGGCCTCACA...CACACACATAAGCACTGAAATCACTTTACCTGCAGGCTCCATGCACCTCCCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR TCA 90 bp AGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAGTTCTATGCTGCTGGTaGAATAATACAAAACATCTC +
Preference number: 2 (lower is better)
Translates to: RVPSSGQCRGPSATLAWQVLCCW*NNTKHL
Trigger: GAGATGTTTTGTATTATTTCACCAGCAGCATAGAAC...TTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR GCA 90 bp AAGGGGAGGGCAGTAGAGCTATTGGGACAAATGGACATCAGAATGAACAGGCTCAGTGGGGCTGAGGTGTaGTGCTGGAGCAGGATCAGT +
Preference number: 2 (lower is better)
Translates to: KGRAVELLGQMDIRMNRLSGAEV*CWSRIS
Trigger: ACTGATCCTGCTCCAGCAGCACACCTCAGCCCCACT...GAGCCTGTTCATTCTGATGTCCATTTGTCCCAATAGCTCTACTGCCCTCCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR GCA 90 bp GAAGGGAGGTGCATGGAGCCTGCAGGTAAAGTGATTTCAGTGCTTATGTGTGTGACCTGGAGGGAACCCTaGCTACTTCCAAGCTGGGAG +
Preference number: 2 (lower is better)
Translates to: EGRCMEPAGKVISVLMCVTWREP*LLPSWE
Trigger: CTCCCAGCTTGGAAGTAGGCAGGGTTCCCTCCAGGT...CACACACATAAGCACTGAAATCACTTTACCTGCAGGCTCCATGCACCTCCCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR GCA 90 bp AAGGGGAGGGCAGTAGAGCTATTGGGACAAATGGACATCAGAATGAACAGGCTCACCTGGAGGGAACCCTaGCTACTTCCAAGCTGGGAG +
Preference number: 2 (lower is better)
Translates to: KGRAVELLGQMDIRMNRLTWREP*LLPSWE
Trigger: CTCCCAGCTTGGAAGTAGGCAGGGTTCCCTCCAGGT...GAGCCTGTTCATTCTGATGTCCATTTGTCCCAATAGCTCTACTGCCCTCCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR CCA 90 bp GAAGGGAGGTGCATGGAGCCTGCAGGTAAAGTGATTTCAGTGCTTATGTGTGTGAGACAGGAAGAGAGCTaGCTGGAGGAAGCGGGAGAG +
Preference number: 2 (lower is better)
Translates to: EGRCMEPAGKVISVLMCVRQEES*LEEAGE
Trigger: CTCTCCCGCTTCCTCCAGCCAGCTCTCTTCCTGTCT...CACACACATAAGCACTGAAATCACTTTACCTGCAGGCTCCATGCACCTCCCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR CCA 90 bp GAAGGGAGGTGCATGGAGCCTGCAGGTAAAGTGATTTCAGTGCTTATGTGTGTGGATCAGTTGGGTCAGTaGGTGGCCTCAGCATCGGAG +
Preference number: 2 (lower is better)
Translates to: EGRCMEPAGKVISVLMCVDQLGQ*VASASE
Trigger: CTCCGATGCTGAGGCCACCCACTGACCCAACTGATC...CACACACATAAGCACTGAAATCACTTTACCTGCAGGCTCCATGCACCTCCCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR CCA 90 bp GAAGGGAGGTGCATGGAGCCTGCAGGTAAAGTGATTTCAGTGCTTATGTGTGTGTGGAGCAGGATCAGTTaGGTCAGTGGGTGGCCTCAG +
Preference number: 2 (lower is better)
Translates to: EGRCMEPAGKVISVLMCVWSRIS*VSGWPQ
Trigger: CTGAGGCCACCCACTGACCCAACTGATCCTGCTCCA...CACACACATAAGCACTGAAATCACTTTACCTGCAGGCTCCATGCACCTCCCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR CCA 90 bp AAGGGGAGGGCAGTAGAGCTATTGGGACAAATGGACATCAGAATGAACAGGCTCCTTATGTGTGTGTGCTaGAGGGGCAGCTTCAGGGGG +
Preference number: 2 (lower is better)
Translates to: KGRAVELLGQMDIRMNRLLMCVC*RGSFRG
Trigger: CCCCCTGAAGCTGCCCCTCCAGCACACACACATAAG...GAGCCTGTTCATTCTGATGTCCATTTGTCCCAATAGCTCTACTGCCCTCCCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR CCA 90 bp GAAGGGAGGTGCATGGAGCCTGCAGGTAAAGTGATTTCAGTGCTTATGTGTGTGAAGATGGAAGGACACTaGGTGTCAGTGGGGCTGAGG +
Preference number: 2 (lower is better)
Translates to: EGRCMEPAGKVISVLMCVKMEGH*VSVGLR
Trigger: CCTCAGCCCCACTGACACCCAGTGTCCTTCCATCTT...CACACACATAAGCACTGAAATCACTTTACCTGCAGGCTCCATGCACCTCCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR GCA 90 bp AAGGGGAGGGCAGTAGAGCTATTGGGACAAATGGACATCAGAATGAACAGGCTCCCTTCTCTTGAGACTTaGTCCTCTTCAGTGAGGTGG +
Preference number: 2 (lower is better)
Translates to: KGRAVELLGQMDIRMNRLPSLET*SSSVRW
Trigger: CCACCTCACTGAAGAGGAGCAAGTCTCAAGAGAAGG...GAGCCTGTTCATTCTGATGTCCATTTGTCCCAATAGCTCTACTGCCCTCCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR CCA 90 bp AATATACATTTCAATTTTGGAGATTGTTCAGACACTGAGAAGAGCTGTATCCTCCCGGGGAGGGGGAGGTaGGTCCCAGCAGCTGTCCCT +
Preference number: 2 (lower is better)
Translates to: NIHFNFGDCSDTEKSCILPGRGR*VPAAVP
Trigger: AGGGACAGCTGCTGGGACCCACCTCCCCCTCCCCGG...GAGGATACAGCTCTTCTCAGTGTCTGAACAATCTCCAAAATTGAAATGTATATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR CCA 90 bp AATATACATTTCAATTTTGGAGATTGTTCAGACACTGAGAAGAGCTGTATCCTCTTGCCCCTGCAGGCCTaGAGGGCTCTGCGCCGCTCA +
Preference number: 2 (lower is better)
Translates to: NIHFNFGDCSDTEKSCILLPLQA*RALRRS
Trigger: TGAGCGGCGCAGAGCCCTCCAGGCCTGCAGGGGCAA...GAGGATACAGCTCTTCTCAGTGTCTGAACAATCTCCAAAATTGAAATGTATATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR TCA 90 bp AATATACATTTCAATTTTGGAGATTGTTCAGACACTGAGAAGAGCTGTATCCTCGGCCCTGCTCTGAGGTaGGCGCACCTCAACCTGGGA +
Preference number: 2 (lower is better)
Translates to: NIHFNFGDCSDTEKSCILGPALR*AHLNLG
Trigger: TCCCAGGTTGAGGTGCGCTCACCTCAGAGCAGGGCC...GAGGATACAGCTCTTCTCAGTGTCTGAACAATCTCCAAAATTGAAATGTATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR GCA 90 bp AAGGGGAGGGCAGTAGAGCTATTGGGACAAATGGACATCAGAATGAACAGGCTCATGGCTCAAGTCTTTTaGTCTGAAGACAGGAGACAG +
Preference number: 2 (lower is better)
Translates to: KGRAVELLGQMDIRMNRLMAQVF*SEDRRQ
Trigger: CTGTCTCCTGTCTTCAGAGCAAAAGACTTGAGCCAT...GAGCCTGTTCATTCTGATGTCCATTTGTCCCAATAGCTCTACTGCCCTCCCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR GCA 90 bp AATATACATTTCAATTTTGGAGATTGTTCAGACACTGAGAAGAGCTGTATCCTCCCCACTGGGAGCAGGTaGTGGGCTGACCCACCAGGA +
Preference number: 2 (lower is better)
Translates to: NIHFNFGDCSDTEKSCILPTGSR*WADPPG
Trigger: TCCTGGTGGGTCAGCCCAGCACCTGCTCCCAGTGGG...GAGGATACAGCTCTTCTCAGTGTCTGAACAATCTCCAAAATTGAAATGTATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR GCA 90 bp AATATACATTTCAATTTTGGAGATTGTTCAGACACTGAGAAGAGCTGTATCCTCAGGCCTGGAGGGCTCTaGGCCGCTCAGACATGGCAT +
Preference number: 2 (lower is better)
Translates to: NIHFNFGDCSDTEKSCILRPGGL*AAQTWH
Trigger: ATGCCATGTCTGAGCGGCGCAGAGCCCTCCAGGCCT...GAGGATACAGCTCTTCTCAGTGTCTGAACAATCTCCAAAATTGAAATGTATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR CCA 90 bp AATATACATTTCAATTTTGGAGATTGTTCAGACACTGAGAAGAGCTGTATCCTCAGTTGGGTCAGTGGGTaGCCTCAGCATCGGAGGGGC +
Preference number: 2 (lower is better)
Translates to: NIHFNFGDCSDTEKSCILSWVSG*PQHRRG
Trigger: GCCCCTCCGATGCTGAGGCCACCCACTGACCCAACT...GAGGATACAGCTCTTCTCAGTGTCTGAACAATCTCCAAAATTGAAATGTATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR TCA 90 bp AATATACATTTCAATTTTGGAGATTGTTCAGACACTGAGAAGAGCTGTATCCTCGCATCGGAGGGGCAATaGCAGTCTTGGGGAGGCATC +
Preference number: 2 (lower is better)
Translates to: NIHFNFGDCSDTEKSCILASEGQ*QSWGGI
Trigger: GATGCCTCCCCAAGACTGTCATTGCCCCTCCGATGC...GAGGATACAGCTCTTCTCAGTGTCTGAACAATCTCCAAAATTGAAATGTATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR GCA 90 bp AATATACATTTCAATTTTGGAGATTGTTCAGACACTGAGAAGAGCTGTATCCTCCGCTCAGACATGGCATaGCCAGCTGTGCTTTGGCCC +
Preference number: 2 (lower is better)
Translates to: NIHFNFGDCSDTEKSCILRSDMA*PAVLWP
Trigger: GGGCCAAAGCACAGCTGGGCATGCCATGTCTGAGCG...GAGGATACAGCTCTTCTCAGTGTCTGAACAATCTCCAAAATTGAAATGTATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR TCA 90 bp AATATACATTTCAATTTTGGAGATTGTTCAGACACTGAGAAGAGCTGTATCCTCTGGGTGTCATGTGTCTaGGGGCGATCGTGGGACTCT +
Preference number: 2 (lower is better)
Translates to: NIHFNFGDCSDTEKSCILWVSCV*GRSWDS
Trigger: AGAGTCCCACGATCGCCCTCAGACACATGACACCCA...GAGGATACAGCTCTTCTCAGTGTCTGAACAATCTCCAAAATTGAAATGTATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR TCA 90 bp AAGGGGAGGGCAGTAGAGCTATTGGGACAAATGGACATCAGAATGAACAGGCTCGTTCTATGCTGCTGGTaGAATAATACAAAACATCTC +
Preference number: 2 (lower is better)
Translates to: KGRAVELLGQMDIRMNRLVLCCW*NNTKHL
Trigger: GAGATGTTTTGTATTATTTCACCAGCAGCATAGAAC...GAGCCTGTTCATTCTGATGTCCATTTGTCCCAATAGCTCTACTGCCCTCCCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR CCA 90 bp AATATACATTTCAATTTTGGAGATTGTTCAGACACTGAGAAGAGCTGTATCCTCGCTGAGGTGTGCTGCTaGAGCAGGATCAGTTGGGTC +
Preference number: 2 (lower is better)
Translates to: NIHFNFGDCSDTEKSCILAEVCC*SRISWV
Trigger: GACCCAACTGATCCTGCTCCAGCAGCACACCTCAGC...GAGGATACAGCTCTTCTCAGTGTCTGAACAATCTCCAAAATTGAAATGTATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR CCA 90 bp AATATACATTTCAATTTTGGAGATTGTTCAGACACTGAGAAGAGCTGTATCCTCGATGCTGACACAATGTaGGCGGCTGCTACTGGGCAG +
Preference number: 2 (lower is better)
Translates to: NIHFNFGDCSDTEKSCILDADTM*AAATGQ
Trigger: CTGCCCAGTAGCAGCCGCCCACATTGTGTCAGCATC...GAGGATACAGCTCTTCTCAGTGTCTGAACAATCTCCAAAATTGAAATGTATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR CCA 90 bp AATATACATTTCAATTTTGGAGATTGTTCAGACACTGAGAAGAGCTGTATCCTCCTTATGTGTGTGTGCTaGAGGGGCAGCTTCAGGGGG +
Preference number: 2 (lower is better)
Translates to: NIHFNFGDCSDTEKSCILLMCVC*RGSFRG
Trigger: CCCCCTGAAGCTGCCCCTCCAGCACACACACATAAG...GAGGATACAGCTCTTCTCAGTGTCTGAACAATCTCCAAAATTGAAATGTATATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR CCA 90 bp AATATACATTTCAATTTTGGAGATTGTTCAGACACTGAGAAGAGCTGTATCCTCTGCGCCGCTCAGACATaGCATGCCCAGCTGTGCTTT +
Preference number: 2 (lower is better)
Translates to: NIHFNFGDCSDTEKSCILCAAQT*HAQLCF
Trigger: AAAGCACAGCTGGGCATGCCATGTCTGAGCGGCGCA...GAGGATACAGCTCTTCTCAGTGTCTGAACAATCTCCAAAATTGAAATGTATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR GCA 90 bp AATATACATTTCAATTTTGGAGATTGTTCAGACACTGAGAAGAGCTGTATCCTCGGGCAGAATTGGGTGTaGTGCTTCCTCCAACCACCA +
Preference number: 2 (lower is better)
Translates to: NIHFNFGDCSDTEKSCILGQNWV*CFLQPP
Trigger: TGGTGGTTGGAGGAAGCAGCACACCCAATTCTGCCC...GAGGATACAGCTCTTCTCAGTGTCTGAACAATCTCCAAAATTGAAATGTATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR CCA 90 bp AATATACATTTCAATTTTGGAGATTGTTCAGACACTGAGAAGAGCTGTATCCTCGAGTCACACACAGAATaGCTCCTTGGGAGGGAGGAC +
Preference number: 2 (lower is better)
Translates to: NIHFNFGDCSDTEKSCILESHTE*LLGRED
Trigger: GTCCTCCCTCCCAAGGAGCCATTCTGTGTGTGACTC...GAGGATACAGCTCTTCTCAGTGTCTGAACAATCTCCAAAATTGAAATGTATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR CAA 90 bp AAACACAGGAAGCTGGGGCTCCTAGCAAAAATATACATTTCAATTTaGGAGATTGTTCAGACACTGAGAAGAGCTGTATCCTCAGCACCA +
Preference number: 2 (lower is better)
Translates to: KHRKLGLLAKIYISI*EIVQTLRRAVSSAP
Trigger: TGGTGCTGAGGATACAGCTCTTCTCAGTGTCTGAACAATCTCCAAAATTGAAATGTATATTTTTGCTAGGAGCCCCAGCTTCCTGTGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR CCA 90 bp AATATACATTTCAATTTTGGAGATTGTTCAGACACTGAGAAGAGCTGTATCCTCAATGGAAAAGTCATGTaGGTGGGCCCCTCCAGTGCT +
Preference number: 2 (lower is better)
Translates to: NIHFNFGDCSDTEKSCILNGKVM*VGPSSA
Trigger: AGCACTGGAGGGGCCCACCCACATGACTTTTCCATT...GAGGATACAGCTCTTCTCAGTGTCTGAACAATCTCCAAAATTGAAATGTATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR CCA 72 bp GGGCCCACCTGGAGGGAACCCTGCCTACTTCCAAGCTaGGAGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCC +
Preference number: 3 (lower is better)
Translates to: GPTWREPCLLPS*ESAVQRPVQGA
Trigger: GGCCCCCTGCACTGGCCGCTGGACGGCACTCTCCCAGCTTGGAAGTAGGCAGGGTTCCCTCCAGGTGGGCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR CAA 90 bp GCAGAGAGTGATCCTGGGGCATGGAAGGGAGGCTGCAGCGCCCGTAGGGGCAGGGGGGCAATGACAGTCTaGGGGAGGCATCTGGCTCTC +
Preference number: 3 (lower is better)
Translates to: AESDPGAWKGGCSARRGRGAMTV*GRHLAL
Trigger: GAGAGCCAGATGCCTCCCCAAGACTGTCATTGCCCC...CCTGCCCCTACGGGCGCTGCAGCCTCCCTTCCATGCCCCAGGATCACTCTCTGC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR CAA 90 bp GCAGAGAGTGATCCTGGGGCATGGAAGGGAGGCTGCAGCGCCCGTAGGGGCAGGCCAGGAAGCCTGGGCTaGAACCCCAGTTCTCCTACC +
Preference number: 3 (lower is better)
Translates to: AESDPGAWKGGCSARRGRPGSLG*NPSSPT
Trigger: GGTAGGAGAACTGGGGTTCAAGCCCAGGCTTCCTGG...CCTGCCCCTACGGGCGCTGCAGCCTCCCTTCCATGCCCCAGGATCACTCTCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR GCA 72 bp CTGGAGGGAACCCTGCCTACTTCCAAGCTGGGAGAGTaGCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAA +
Preference number: 3 (lower is better)
Translates to: LEGTLPTSKLGE*RPAASAGGHQQ
Trigger: TTGCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCTCCCAGCTTGGAAGTAGGCAGGGTTCCCTCCAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR GCA 72 bp TCTTCAGTGAGGTGGGGGCCCACCTGGAGGGAACCCTaGCTACTTCCAAGCTGGGAGAGTGCCGTCCAGCGG +
Preference number: 3 (lower is better)
Translates to: SSVRWGPTWREP*LLPSWESAVQR
Trigger: CCGCTGGACGGCACTCTCCCAGCTTGGAAGTAGGCAGGGTTCCCTCCAGGTGGGCCCCCACCTCACTGAAGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR GCA 72 bp GGGACACTTCCCCACACTGTCAGAGCTCAGGCACAGTaGCCTGCAGTGAGGGCCAACCCCCAGGACGACTGG +
Preference number: 3 (lower is better)
Translates to: GTLPHTVRAQAQ*PAVRANPQDDW
Trigger: CCAGTCGTCCTGGGGGTTGGCCCTCACTGCAGGGCACTGTGCCTGAGCTCTGACAGTGTGGGGAAGTGTCCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337400.6
3UTR-3UTR CAA 90 bp TGGGAGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGCTGGAGCAGGATCAGTaGGGTCAGTGGGTGGCCTCA +
Preference number: 3 (lower is better)
Translates to: WESAVQRPVQGAISNIGLLEQDQ*GQWVAS
Trigger: TGAGGCCACCCACTGACCCAACTGATCCTGCTCCAG...CAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCTCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR GCA 72 bp CGCTCAGACATGGCATGCCCAGCTGTGCTTTGGCCCTaGTCTGAGGTGAGCGCACCTCAACCTGGGAGCAGG +
Preference number: 3 (lower is better)
Translates to: RSDMACPAVLWP*SEVSAPQPGSR
Trigger: CCTGCTCCCAGGTTGAGGTGCGCTCACCTCAGAGCAGGGCCAAAGCACAGCTGGGCATGCCATGTCTGAGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR CCA 72 bp CTGCTGCTCCAGGCCGGGTGCTCAAGGGCTGGTCAATaGAAAAGTCATGTGGGTGGGCCCCTCCAGTGCTGG +
Preference number: 3 (lower is better)
Translates to: LLLQAGCSRAGQ*KSHVGGPLQCW
Trigger: CCAGCACTGGAGGGGCCCACCCACATGACTTTTCCATTGACCAGCCCTTGAGCACCCGGCCTGGAGCAGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR CAA 90 bp GAGGGAACCCTGCCTACTTCCAAGCTGGGAGAGTGCCGTCCAGCGGCCAGTGCACTGGAGCAGGATCAGTaGGGTCAGTGGGTGGCCTCA +
Preference number: 3 (lower is better)
Translates to: EGTLPTSKLGECRPAASALEQDQ*GQWVAS
Trigger: TGAGGCCACCCACTGACCCAACTGATCCTGCTCCAG...TGCACTGGCCGCTGGACGGCACTCTCCCAGCTTGGAAGTAGGCAGGGTTCCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR CAA 90 bp CCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAACCAGTCTGGAGCAGGATCAGTaGGGTCAGTGGGTGGCCTCA +
Preference number: 3 (lower is better)
Translates to: PSSGQCRGPSATLAWQTSLEQDQ*GQWVAS
Trigger: TGAGGCCACCCACTGACCCAACTGATCCTGCTCCAG...ACTGGTTTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR CAA 90 bp GGGCCCACCTGGAGGGAACCCTGCCTACTTCCAAGCTGGGAGAGTGCCGTCCAGGGGCCATCAGCAACATaGGCCTGGCAAACCAGTGTG +
Preference number: 3 (lower is better)
Translates to: GPTWREPCLLPSWESAVQGPSAT*AWQTSV
Trigger: CACACTGGTTTGCCAGGCCAATGTTGCTGATGGCCC...CTGGACGGCACTCTCCCAGCTTGGAAGTAGGCAGGGTTCCCTCCAGGTGGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR CCA 72 bp TGGGACTCTGCTGCTCCAGGCCGGGTGCTCAAGGGCTaGTCAATGGAAAAGTCATGTGGGTGGGCCCCTCCA +
Preference number: 3 (lower is better)
Translates to: WDSAAPGRVLKG*SMEKSCGWAPP
Trigger: TGGAGGGGCCCACCCACATGACTTTTCCATTGACCAGCCCTTGAGCACCCGGCCTGGAGCAGCAGAGTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR CCA 72 bp AGTGGGGCTGAGGTGTGCTGCTGGAGCAGGATCAGTTaGGTCAGTGGGTGGCCTCAGCATCGGAGGGGCAAT +
Preference number: 3 (lower is better)
Translates to: SGAEVCCWSRIS*VSGWPQHRRGN
Trigger: ATTGCCCCTCCGATGCTGAGGCCACCCACTGACCCAACTGATCCTGCTCCAGCAGCACACCTCAGCCCCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR CCA 72 bp AGGACACTGGGTGTCAGTGGGGCTGAGGTGTGCTGCTaGAGCAGGATCAGTTGGGTCAGTGGGTGGCCTCAG +
Preference number: 3 (lower is better)
Translates to: RTLGVSGAEVCC*SRISWVSGWPQ
Trigger: CTGAGGCCACCCACTGACCCAACTGATCCTGCTCCAGCAGCACACCTCAGCCCCACTGACACCCAGTGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR GCA 72 bp GAGGGCGATCGTGGGACTCTGCTGCTCCAGGCCGGGTaGTCAAGGGCTGGTCAATGGAAAAGTCATGTGGGT +
Preference number: 3 (lower is better)
Translates to: EGDRGTLLLQAG*SRAGQWKSHVG
Trigger: ACCCACATGACTTTTCCATTGACCAGCCCTTGAGCACCCGGCCTGGAGCAGCAGAGTCCCACGATCGCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR CCA 72 bp GTGTGCTGCTGGAGCAGGATCAGTTGGGTCAGTGGGTaGCCTCAGCATCGGAGGGGCAATGACAGTCTTGGG +
Preference number: 3 (lower is better)
Translates to: VCCWSRISWVSG*PQHRRGNDSLG
Trigger: CCCAAGACTGTCATTGCCCCTCCGATGCTGAGGCCACCCACTGACCCAACTGATCCTGCTCCAGCAGCACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR GCA 72 bp GTCCTTTGCAGCAGGGACCCCATGACTATAGGGGGCTaGAGTCAGTCCAGGCCATGCTTAGCCTTCCCTGGA +
Preference number: 3 (lower is better)
Translates to: VLCSRDPMTIGG*SQSRPCLAFPG
Trigger: TCCAGGGAAGGCTAAGCATGGCCTGGACTGACTGCAGCCCCCTATAGTCATGGGGTCCCTGCTGCAAAGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR CCA 72 bp TTGGCCTGGCAAACCAGTGTGAAGATGGAAGGACACTaGGTGTCAGTGGGGCTGAGGTGTGCTGCTGGAGCA +
Preference number: 3 (lower is better)
Translates to: LAWQTSVKMEGH*VSVGLRCAAGA
Trigger: TGCTCCAGCAGCACACCTCAGCCCCACTGACACCCAGTGTCCTTCCATCTTCACACTGGTTTGCCAGGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR CAA 90 bp TGGGAGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGAGCTTAGTGTTTCTTaGGATGGCTCAAGTCTTTTG +
Preference number: 3 (lower is better)
Translates to: WESAVQRPVQGAISNIGLELSVS*DGSSLL
Trigger: CAAAAGACTTGAGCCATCCAAAGAAACACTAAGCTC...CAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCTCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR CAA 90 bp GGGCCCACCTGGAGGGAACCCTGCCTACTTCCAAGCTGGGAGAGTGCCGTCCAGGAGCTTAGTGTTTCTTaGGATGGCTCAAGTCTTTTG +
Preference number: 3 (lower is better)
Translates to: GPTWREPCLLPSWESAVQELSVS*DGSSLL
Trigger: CAAAAGACTTGAGCCATCCAAAGAAACACTAAGCTC...CTGGACGGCACTCTCCCAGCTTGGAAGTAGGCAGGGTTCCCTCCAGGTGGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR CAA 90 bp CCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAACCAGTGAGCTTAGTGTTTCTTaGGATGGCTCAAGTCTTTTG +
Preference number: 3 (lower is better)
Translates to: PSSGQCRGPSATLAWQTSELSVS*DGSSLL
Trigger: CAAAAGACTTGAGCCATCCAAAGAAACACTAAGCTC...ACTGGTTTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR CAA 90 bp AACCCCCATCAGCTGGGTAGGTGGGGAGCGGGAAGAATCCTGCCAGCAGAGAGTAGGGCAGTAGAGCTATaGGGACAAATGGACATCAGA +
Preference number: 3 (lower is better)
Translates to: NPHQLGRWGAGRILPAESRAVEL*GQMDIR
Trigger: TCTGATGTCCATTTGTCCCAATAGCTCTACTGCCCT...ACTCTCTGCTGGCAGGATTCTTCCCGCTCCCCACCTACCCAGCTGATGGGGGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR TCA 72 bp GGAGGGAAGGGAGGTGCATGGAGCCTGCAGGTAAAGTaGTTTCAGTGCTTATGTGTGTGTGCTGGAGGGGCA +
Preference number: 3 (lower is better)
Translates to: GGKGGAWSLQVK*FQCLCVCAGGA
Trigger: TGCCCCTCCAGCACACACACATAAGCACTGAAATCACTTTACCTGCAGGCTCCATGCACCTCCCTTCCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR GCA 72 bp ATCCTGCATGCTCAGTCAGTGCCTTGCATGTTCCACTaGCAAGATCACAGGGACACTTCCCCACACTGTCAG +
Preference number: 3 (lower is better)
Translates to: ILHAQSVPCMFH*QDHRDTSPHCQ
Trigger: CTGACAGTGTGGGGAAGTGTCCCTGTGATCTTGGCAGTGGAACATGCAAGGCACTGACTGAGCATGCAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337400.6
3UTR GCA 72 bp GAGATGGAGCTGATCCTGCATGCTCAGTCAGTGCCTTaGATGTTCCACTGCCAAGATCACAGGGACACTTCC +
Preference number: 3 (lower is better)
Translates to: EMELILHAQSVP*MFHCQDHRDTS
Trigger: GGAAGTGTCCCTGTGATCTTGGCAGTGGAACATGCAAGGCACTGACTGAGCATGCAGGATCAGCTCCATCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337400.6
3UTR-3UTR CAA 90 bp AGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAACCAGTGTGAAGGAGCTTAGTGTTTCTTaGGATGGCTCAAGTCTTTTG +
Preference number: 3 (lower is better)
Translates to: SGQCRGPSATLAWQTSVKELSVS*DGSSLL
Trigger: CAAAAGACTTGAGCCATCCAAAGAAACACTAAGCTC...CTTCACACTGGTTTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR CAA 90 bp GAAGGGAGGTGCATGGAGCCTGCAGGTAAAGTGATTTCAGTGCTTATGTGTGTGGTCCTAGGGGCAGAATaGGGTGTGCTGCTTCCTCCA +
Preference number: 3 (lower is better)
Translates to: EGRCMEPAGKVISVLMCVVLGAE*GVLLPP
Trigger: TGGAGGAAGCAGCACACCCAATTCTGCCCCTAGGAC...CACACACATAAGCACTGAAATCACTTTACCTGCAGGCTCCATGCACCTCCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR CAA 90 bp AATATACATTTCAATTTTGGAGATTGTTCAGACACTGAGAAGAGCTGTATCCTCGTCCTAGGGGCAGAATaGGGTGTGCTGCTTCCTCCA +
Preference number: 3 (lower is better)
Translates to: NIHFNFGDCSDTEKSCILVLGAE*GVLLPP
Trigger: TGGAGGAAGCAGCACACCCAATTCTGCCCCTAGGAC...GAGGATACAGCTCTTCTCAGTGTCTGAACAATCTCCAAAATTGAAATGTATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR TCA 72 bp AAATATACATTTCAATTTTGGAGATTGTTCAGACACTaGGAAGAGCTGTATCCTCAGCACCAGACCCGGGTC +
Preference number: 3 (lower is better)
Translates to: KYTFQFWRLFRH*EELYPQHQTRV
Trigger: GACCCGGGTCTGGTGCTGAGGATACAGCTCTTCTCAGTGTCTGAACAATCTCCAAAATTGAAATGTATATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
3UTR-3UTR CAA 90 bp AATATACATTTCAATTTTGGAGATTGTTCAGACACTGAGAAGAGCTGTATCCTCAGGGCAGTAGAGCTATaGGGACAAATGGACATCAGA +
Preference number: 3 (lower is better)
Translates to: NIHFNFGDCSDTEKSCILRAVEL*GQMDIR
Trigger: TCTGATGTCCATTTGTCCCAATAGCTCTACTGCCCT...GAGGATACAGCTCTTCTCAGTGTCTGAACAATCTCCAAAATTGAAATGTATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR TCA 90 bp GAGGGCCAACCCCCAGGACGACTGGGTGTGCCAGGCCAGCCCACCTGCCCCACTCCCGGCACTCCATGTTaGGGCTGCCGCATGAGGCCC +
Preference number: 4 (lower is better)
Translates to: EGQPPGRLGVPGQPTCPTPGTPC*GCRMRP
Trigger: GGGCCTCATGCGGCAGCCTCAACATGGAGTGCCGGG...AGTGGGGCAGGTGGGCTGGCCTGGCACACCCAGTCGTCCTGGGGGTTGGCCCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337400.6
CDS-3UTR GCA 90 bp GCAGAGAGTGATCCTGGGGCATGGAAGGGAGGCTGCAGCGCCCGTAGGGGCAGGTGCTGGCGGAAGGCCTaGCCCGAGCTCTCCCTGGCC +
Preference number: 4 (lower is better)
Translates to: AESDPGAWKGGCSARRGRCWRKA*PELSLA
Trigger: GGCCAGGGAGAGCTCGGGGCAGGCCTTCCGCCAGCA...CCTGCCCCTACGGGCGCTGCAGCCTCCCTTCCATGCCCCAGGATCACTCTCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp GAGGGCCAACCCCCAGGACGACTGGGTGTGCCAGGCCAGCCCACCTGCCCCACTAACCCCCAGGACGACTaGGTGTGCCAGGCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: EGQPPGRLGVPGQPTCPTNPQDD*VCQASP
Trigger: TGGGCTGGCCTGGCACACCCAGTCGTCCTGGGGGTT...AGTGGGGCAGGTGGGCTGGCCTGGCACACCCAGTCGTCCTGGGGGTTGGCCCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000337400.6
CDS-3UTR GCA 90 bp TGGGAGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGCAACACTGTCCCGGCTaGCTACGGCGCCACCGCCGC +
Preference number: 4 (lower is better)
Translates to: WESAVQRPVQGAISNIGLQHCPG*LRRHRR
Trigger: GCGGCGGTGGCGCCGTAGGCAGCCGGGACAGTGTTG...CAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCTCCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp TGGGAGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGTGCTGGCGGAAGGCCTaGCCCGAGCTCTCCCTGGCC +
Preference number: 4 (lower is better)
Translates to: WESAVQRPVQGAISNIGLCWRKA*PELSLA
Trigger: GGCCAGGGAGAGCTCGGGGCAGGCCTTCCGCCAGCA...CAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCTCCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp GGGCCCACCTGGAGGGAACCCTGCCTACTTCCAAGCTGGGAGAGTGCCGTCCAGTGCTGGCGGAAGGCCTaGCCCGAGCTCTCCCTGGCC +
Preference number: 4 (lower is better)
Translates to: GPTWREPCLLPSWESAVQCWRKA*PELSLA
Trigger: GGCCAGGGAGAGCTCGGGGCAGGCCTTCCGCCAGCA...CTGGACGGCACTCTCCCAGCTTGGAAGTAGGCAGGGTTCCCTCCAGGTGGGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp GTGCCCTGCAGTGAGGGCCAACCCCCAGGACGACTGGGTGTGCCAGGCCAGCCCTCAGGCACAGTGCCCTaGAGTGAGGGCCAACCCCCA +
Preference number: 4 (lower is better)
Translates to: VPCSEGQPPGRLGVPGQPSGTVP*SEGQPP
Trigger: TGGGGGTTGGCCCTCACTGCAGGGCACTGTGCCTGA...GGGCTGGCCTGGCACACCCAGTCGTCCTGGGGGTTGGCCCTCACTGCAGGGCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000337400.6
CDS-3UTR CCA 90 bp TGGGAGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGGGCAGTGGGAGTGCTaGCGGAAGGCCTGCCCCGAG +
Preference number: 4 (lower is better)
Translates to: WESAVQRPVQGAISNIGLGQWEC*RKACPE
Trigger: CTCGGGGCAGGCCTTCCGCCAGCACTCCCACTGCCC...CAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCTCCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp TGGGAGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGCCGGGGAGGGGGAGGTaGGTCCCAGCAGCTGTCCCT +
Preference number: 4 (lower is better)
Translates to: WESAVQRPVQGAISNIGLPGRGR*VPAAVP
Trigger: AGGGACAGCTGCTGGGACCCACCTCCCCCTCCCCGG...CAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCTCCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR TCA 90 bp CAGGCACAGTGCCCTGCAGTGAGGGCCAACCCCCAGGACGACTGGGTGTGCCAGGGCTGGCTTTGCCGGTaGGGATGCTGCGGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: QAQCPAVRANPQDDWVCQGWLCR*GCCGPS
Trigger: AGAAGGCCCGCAGCATCCTCACCGGCAAAGCCAGCC...CTGGCACACCCAGTCGTCCTGGGGGTTGGCCCTCACTGCAGGGCACTGTGCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337400.6
CDS-3UTR TCA 90 bp GAGGGCCAACCCCCAGGACGACTGGGTGTGCCAGGCCAGCCCACCTGCCCCACTGCAGGAACTCACGGGTaGCAAAGCCACTGCCGTTGG +
Preference number: 4 (lower is better)
Translates to: EGQPPGRLGVPGQPTCPTAGTHG*QSHCRW
Trigger: CCAACGGCAGTGGCTTTGTCACCCGTGAGTTCCTGC...AGTGGGGCAGGTGGGCTGGCCTGGCACACCCAGTCGTCCTGGGGGTTGGCCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337400.6
CDS-3UTR TCA 90 bp GCAGAGAGTGATCCTGGGGCATGGAAGGGAGGCTGCAGCGCCCGTAGGGGCAGGTCTGGGCGTGCTCGGTaGCCAGTTGCCGCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: AESDPGAWKGGCSARRGRSGRAR*PVAAGQ
Trigger: CTGACCTGCGGCAACTGGTCACCGAGCACGCCCAGA...CCTGCCCCTACGGGCGCTGCAGCCTCCCTTCCATGCCCCAGGATCACTCTCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR TCA 90 bp TGGGAGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGAGCTCTCCCTGGCCTaGCCCCAGGACTCAGACCCC +
Preference number: 4 (lower is better)
Translates to: WESAVQRPVQGAISNIGLELSLA*PQDSDP
Trigger: GGGGTCTGAGTCCTGGGGTCAGGCCAGGGAGAGCTC...CAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCTCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR TCA 90 bp CTACTTCCAAGCTGGGAGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAGGGGGAGTGGGGCCTaGACTCCCGTGGAGCCAGCT +
Preference number: 4 (lower is better)
Translates to: LLPSWESAVQRPVQGAISRGSGA*TPVEPA
Trigger: AGCTGGCTCCACGGGAGTTCAGGCCCCACTCCCCCT...GCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCTCCCAGCTTGGAAGTAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR TCA 90 bp GCAGAGAGTGATCCTGGGGCATGGAAGGGAGGCTGCAGCGCCCGTAGGGGCAGGGGTGGCCAGCTGGGCTaGGTAAAGGGGAAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: AESDPGAWKGGCSARRGRGGQLG*VKGKGR
Trigger: CCTCCCCTTCCCCTTTACTCAGCCCAGCTGGCCACC...CCTGCCCCTACGGGCGCTGCAGCCTCCCTTCCATGCCCCAGGATCACTCTCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp CCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAACCAGTCAACACTGTCCCGGCTaGCTACGGCGCCACCGCCGC +
Preference number: 4 (lower is better)
Translates to: PSSGQCRGPSATLAWQTSQHCPG*LRRHRR
Trigger: GCGGCGGTGGCGCCGTAGGCAGCCGGGACAGTGTTG...ACTGGTTTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp GAGGGCCAACCCCCAGGACGACTGGGTGTGCCAGGCCAGCCCACCTGCCCCACTGCTTCCTCCTGTGGCTaGTCCATGGCTGATCTCCCC +
Preference number: 4 (lower is better)
Translates to: EGQPPGRLGVPGQPTCPTASSCG*SMADLP
Trigger: GGGGAGATCAGCCATGGAGCAGCCACAGGAGGAAGC...AGTGGGGCAGGTGGGCTGGCCTGGCACACCCAGTCGTCCTGGGGGTTGGCCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337400.6
CDS-3UTR GCA 90 bp GCAGAGAGTGATCCTGGGGCATGGAAGGGAGGCTGCAGCGCCCGTAGGGGCAGGGCGATCGTGGGACTCTaGTGCTCCAGGCCGGGTGCT +
Preference number: 4 (lower is better)
Translates to: AESDPGAWKGGCSARRGRAIVGL*CSRPGA
Trigger: AGCACCCGGCCTGGAGCAGCAGAGTCCCACGATCGC...CCTGCCCCTACGGGCGCTGCAGCCTCCCTTCCATGCCCCAGGATCACTCTCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp CTACTTCCAAGCTGGGAGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCTGGCCCAGCCCTGCCTaGTCACCTGCAGGCCCCTCT +
Preference number: 4 (lower is better)
Translates to: LLPSWESAVQRPVQGAISWPSPA*SPAGPS
Trigger: AGAGGGGCCTGCAGGTGAGCAGGCAGGGCTGGGCCA...GCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCTCCCAGCTTGGAAGTAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp TGGGAGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGTGGCCCAGCCCTGCCTaGTCACCTGCAGGCCCCTCT +
Preference number: 4 (lower is better)
Translates to: WESAVQRPVQGAISNIGLWPSPA*SPAGPS
Trigger: AGAGGGGCCTGCAGGTGAGCAGGCAGGGCTGGGCCA...CAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCTCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp GCAGAGAGTGATCCTGGGGCATGGAAGGGAGGCTGCAGCGCCCGTAGGGGCAGGCCTGTGGCTGCTCCATaGCTGATCTCCCCTCGGCGC +
Preference number: 4 (lower is better)
Translates to: AESDPGAWKGGCSARRGRPVAAP*LISPRR
Trigger: GCGCCGAGGGGAGATCAGCCATGGAGCAGCCACAGG...CCTGCCCCTACGGGCGCTGCAGCCTCCCTTCCATGCCCCAGGATCACTCTCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
CDS-3UTR CCA 90 bp CCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAACCAGTGGGCAGTGGGAGTGCTaGCGGAAGGCCTGCCCCGAG +
Preference number: 4 (lower is better)
Translates to: PSSGQCRGPSATLAWQTSGQWEC*RKACPE
Trigger: CTCGGGGCAGGCCTTCCGCCAGCACTCCCACTGCCC...ACTGGTTTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp TGGGAGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGTTGCCCCTGCAGGCCTaGAGGGCTCTGCGCCGCTCA +
Preference number: 4 (lower is better)
Translates to: WESAVQRPVQGAISNIGLLPLQA*RALRRS
Trigger: TGAGCGGCGCAGAGCCCTCCAGGCCTGCAGGGGCAA...CAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCTCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR TCA 90 bp GAGGGCCAACCCCCAGGACGACTGGGTGTGCCAGGCCAGCCCACCTGCCCCACTGGCATCGTCTGGGTCTaGACGCAGATGGACCTCTAC +
Preference number: 4 (lower is better)
Translates to: EGQPPGRLGVPGQPTCPTGIVWV*TQMDLY
Trigger: GTAGAGGTCCATCTGCGTTCAGACCCAGACGATGCC...AGTGGGGCAGGTGGGCTGGCCTGGCACACCCAGTCGTCCTGGGGGTTGGCCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337400.6
CDS-3UTR TCA 90 bp GGGCCCACCTGGAGGGAACCCTGCCTACTTCCAAGCTGGGAGAGTGCCGTCCAGGGCTGGCTTTGCCGGTaGGGATGCTGCGGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: GPTWREPCLLPSWESAVQGWLCR*GCCGPS
Trigger: AGAAGGCCCGCAGCATCCTCACCGGCAAAGCCAGCC...CTGGACGGCACTCTCCCAGCTTGGAAGTAGGCAGGGTTCCCTCCAGGTGGGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR TCA 90 bp GGGCCCACCTGGAGGGAACCCTGCCTACTTCCAAGCTGGGAGAGTGCCGTCCAGAGCCTGCAGGTGCAATaGTGGGGCAGAGGGCAGGCC +
Preference number: 4 (lower is better)
Translates to: GPTWREPCLLPSWESAVQSLQVQ*WGRGQA
Trigger: GGCCTGCCCTCTGCCCCATCATTGCACCTGCAGGCT...CTGGACGGCACTCTCCCAGCTTGGAAGTAGGCAGGGTTCCCTCCAGGTGGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR TCA 90 bp GAGGGAACCCTGCCTACTTCCAAGCTGGGAGAGTGCCGTCCAGCGGCCAGTGCAGAGCTCTCCCTGGCCTaGCCCCAGGACTCAGACCCC +
Preference number: 4 (lower is better)
Translates to: EGTLPTSKLGECRPAASAELSLA*PQDSDP
Trigger: GGGGTCTGAGTCCTGGGGTCAGGCCAGGGAGAGCTC...TGCACTGGCCGCTGGACGGCACTCTCCCAGCTTGGAAGTAGGCAGGGTTCCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR TCA 90 bp TGGGAGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGGTGGCCAGCTGGGCTaGGTAAAGGGGAAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: WESAVQRPVQGAISNIGLGGQLG*VKGKGR
Trigger: CCTCCCCTTCCCCTTTACTCAGCCCAGCTGGCCACC...CAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCTCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR TCA 90 bp TGGGAGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGGCCCTGCTCTGAGGTaGGCGCACCTCAACCTGGGA +
Preference number: 4 (lower is better)
Translates to: WESAVQRPVQGAISNIGLGPALR*AHLNLG
Trigger: TCCCAGGTTGAGGTGCGCTCACCTCAGAGCAGGGCC...CAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCTCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp GCAGAGAGTGATCCTGGGGCATGGAAGGGAGGCTGCAGCGCCCGTAGGGGCAGGCCTCGGCGCCACACCTaGAGGCCCAGTCATAGCTCT +
Preference number: 4 (lower is better)
Translates to: AESDPGAWKGGCSARRGRPRRHT*RPSHSS
Trigger: AGAGCTATGACTGGGCCTGCAGGTGTGGCGCCGAGG...CCTGCCCCTACGGGCGCTGCAGCCTCCCTTCCATGCCCCAGGATCACTCTCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
CDS-3UTR GCA 90 bp GCAGAGAGTGATCCTGGGGCATGGAAGGGAGGCTGCAGCGCCCGTAGGGGCAGGCTGCTCCAGGCCGGGTaGTCAAGGGCTGGTCAATGG +
Preference number: 4 (lower is better)
Translates to: AESDPGAWKGGCSARRGRLLQAG*SRAGQW
Trigger: CCATTGACCAGCCCTTGAGCACCCGGCCTGGAGCAG...CCTGCCCCTACGGGCGCTGCAGCCTCCCTTCCATGCCCCAGGATCACTCTCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp TGGGAGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGCCGTCCAGCGGCCAGTaGAGGGGGCCATCAGCAACA +
Preference number: 4 (lower is better)
Translates to: WESAVQRPVQGAISNIGLPSSGQ*RGPSAT
Trigger: TGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGG...CAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCTCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp GGGCCCACCTGGAGGGAACCCTGCCTACTTCCAAGCTGGGAGAGTGCCGTCCAGCCGTCCAGCGGCCAGTaGAGGGGGCCATCAGCAACA +
Preference number: 4 (lower is better)
Translates to: GPTWREPCLLPSWESAVQPSSGQ*RGPSAT
Trigger: TGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGG...CTGGACGGCACTCTCCCAGCTTGGAAGTAGGCAGGGTTCCCTCCAGGTGGGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp GGGCCCACCTGGAGGGAACCCTGCCTACTTCCAAGCTGGGAGAGTGCCGTCCAGCCCACTGGGAGCAGGTaGTGGGCTGACCCACCAGGA +
Preference number: 4 (lower is better)
Translates to: GPTWREPCLLPSWESAVQPTGSR*WADPPG
Trigger: TCCTGGTGGGTCAGCCCAGCACCTGCTCCCAGTGGG...CTGGACGGCACTCTCCCAGCTTGGAAGTAGGCAGGGTTCCCTCCAGGTGGGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp CTACTTCCAAGCTGGGAGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCCCCACTGGGAGCAGGTaGTGGGCTGACCCACCAGGA +
Preference number: 4 (lower is better)
Translates to: LLPSWESAVQRPVQGAISPTGSR*WADPPG
Trigger: TCCTGGTGGGTCAGCCCAGCACCTGCTCCCAGTGGG...GCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCTCCCAGCTTGGAAGTAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp CCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAACCAGTGCATGGAAGGGAGGCTaGAGCGCCCGTAGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: PSSGQCRGPSATLAWQTSAWKGG*SARRGR
Trigger: CCTGCCCCTACGGGCGCTGCAGCCTCCCTTCCATGC...ACTGGTTTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp AGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAGCATGGAAGGGAGGCTaGAGCGCCCGTAGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: RVPSSGQCRGPSATLAWQAWKGG*SARRGR
Trigger: CCTGCCCCTACGGGCGCTGCAGCCTCCCTTCCATGC...TTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp TGGGAGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGGGCCCCTCCAGTGCTaGCCCCATTGGAGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: WESAVQRPVQGAISNIGLGPLQC*PHWSLQ
Trigger: CTGCAGACTCCAATGGGGCCAGCACTGGAGGGGCCC...CAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCTCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp CTACTTCCAAGCTGGGAGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCCCAGCGGTGTGGGACTaGTCCCACAAGGTCCCCGGA +
Preference number: 4 (lower is better)
Translates to: LLPSWESAVQRPVQGAISPAVWD*SHKVPG
Trigger: TCCGGGGACCTTGTGGGACCAGTCCCACACCGCTGG...GCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCTCCCAGCTTGGAAGTAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp GGGCCCACCTGGAGGGAACCCTGCCTACTTCCAAGCTGGGAGAGTGCCGTCCAGCGTAGGGGCAGGGGCTaGGCACTTCCACCCAGAGTC +
Preference number: 4 (lower is better)
Translates to: GPTWREPCLLPSWESAVQRRGRG*ALPPRV
Trigger: GACTCTGGGTGGAAGTGCCCAGCCCCTGCCCCTACG...CTGGACGGCACTCTCCCAGCTTGGAAGTAGGCAGGGTTCCCTCCAGGTGGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR TCA 90 bp GTGGGTGGCCTCAGCATCGGAGGGGCAATGACAGTCTTGGGGAGGCATCTGGCTCCCGGCACTCCATGTTaGGGCTGCCGCATGAGGCCC +
Preference number: 4 (lower is better)
Translates to: VGGLSIGGAMTVLGRHLAPGTPC*GCRMRP
Trigger: GGGCCTCATGCGGCAGCCTCAACATGGAGTGCCGGG...AGCCAGATGCCTCCCCAAGACTGTCATTGCCCCTCCGATGCTGAGGCCACCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000448077.6
CDS-3UTR TCA 90 bp AGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAGGCTGGCTTTGCCGGTaGGGATGCTGCGGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: RVPSSGQCRGPSATLAWQGWLCR*GCCGPS
Trigger: AGAAGGCCCGCAGCATCCTCACCGGCAAAGCCAGCC...TTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR TCA 90 bp CCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAACCAGTCCCGTGGAACGTTCATaGGGCCTGGCCGGTCTCCAC +
Preference number: 4 (lower is better)
Translates to: PSSGQCRGPSATLAWQTSPVERS*GLAGLH
Trigger: GTGGAGACCGGCCAGGCCTCATGAACGTTCCACGGG...ACTGGTTTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR TCA 90 bp AGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAACCTGGCCCTGGATGCTaGCACAATGTGGGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: RVPSSGQCRGPSATLAWQPGPGC*HNVGGC
Trigger: GCAGCCGCCCACATTGTGTCAGCATCCAGGGCCAGG...TTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR TCA 90 bp AGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAGGCCCTGCTCTGAGGTaGGCGCACCTCAACCTGGGA +
Preference number: 4 (lower is better)
Translates to: RVPSSGQCRGPSATLAWQGPALR*AHLNLG
Trigger: TCCCAGGTTGAGGTGCGCTCACCTCAGAGCAGGGCC...TTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR TCA 90 bp CCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAACCAGTGGCCCTGCTCTGAGGTaGGCGCACCTCAACCTGGGA +
Preference number: 4 (lower is better)
Translates to: PSSGQCRGPSATLAWQTSGPALR*AHLNLG
Trigger: TCCCAGGTTGAGGTGCGCTCACCTCAGAGCAGGGCC...ACTGGTTTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp CTACTTCCAAGCTGGGAGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCCCTCGGCGCCACACCTaGAGGCCCAGTCATAGCTCT +
Preference number: 4 (lower is better)
Translates to: LLPSWESAVQRPVQGAISPRRHT*RPSHSS
Trigger: AGAGCTATGACTGGGCCTGCAGGTGTGGCGCCGAGG...GCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCTCCCAGCTTGGAAGTAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
CDS-3UTR GCA 90 bp GAGGGCCAACCCCCAGGACGACTGGGTGTGCCAGGCCAGCCCACCTGCCCCACTAGGCCATTCACCAACTaGTTCCACACCAGCCCCTTC +
Preference number: 4 (lower is better)
Translates to: EGQPPGRLGVPGQPTCPTRPFTN*FHTSPF
Trigger: GAAGGGGCTGGTGTGGAAGCAGTTGGTGAATGGCCT...AGTGGGGCAGGTGGGCTGGCCTGGCACACCCAGTCGTCCTGGGGGTTGGCCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000337400.6
CDS-3UTR GCA 90 bp GCAGAGAGTGATCCTGGGGCATGGAAGGGAGGCTGCAGCGCCCGTAGGGGCAGGTGCATCATCTGGGCGTaGTCGGTGACCAGTTGCCGC +
Preference number: 4 (lower is better)
Translates to: AESDPGAWKGGCSARRGRCIIWA*SVTSCR
Trigger: GCGGCAACTGGTCACCGAGCACGCCCAGATGATGCA...CCTGCCCCTACGGGCGCTGCAGCCTCCCTTCCATGCCCCAGGATCACTCTCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp GCAGAGAGTGATCCTGGGGCATGGAAGGGAGGCTGCAGCGCCCGTAGGGGCAGGTCCTGGAGCAGAGGGTaGAGCGAGGTCTCGGTTTCG +
Preference number: 4 (lower is better)
Translates to: AESDPGAWKGGCSARRGRSWSRG*SEVSVS
Trigger: CGAAACCGAGACCTCGCTGCACCCTCTGCTCCAGGA...CCTGCCCCTACGGGCGCTGCAGCCTCCCTTCCATGCCCCAGGATCACTCTCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp AGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAGCGATCGTGGGACTCTaGTGCTCCAGGCCGGGTGCT +
Preference number: 4 (lower is better)
Translates to: RVPSSGQCRGPSATLAWQAIVGL*CSRPGA
Trigger: AGCACCCGGCCTGGAGCAGCAGAGTCCCACGATCGC...TTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp CCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAACCAGTGCGATCGTGGGACTCTaGTGCTCCAGGCCGGGTGCT +
Preference number: 4 (lower is better)
Translates to: PSSGQCRGPSATLAWQTSAIVGL*CSRPGA
Trigger: AGCACCCGGCCTGGAGCAGCAGAGTCCCACGATCGC...ACTGGTTTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp GGGCCCACCTGGAGGGAACCCTGCCTACTTCCAAGCTGGGAGAGTGCCGTCCAGTCCAAGCTGGGAGAGTaGCGTCCAGCGGCCAGTGCA +
Preference number: 4 (lower is better)
Translates to: GPTWREPCLLPSWESAVQSKLGE*RPAASA
Trigger: TGCACTGGCCGCTGGACGGCACTCTCCCAGCTTGGA...CTGGACGGCACTCTCCCAGCTTGGAAGTAGGCAGGGTTCCCTCCAGGTGGGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp GCAGAGAGTGATCCTGGGGCATGGAAGGGAGGCTGCAGCGCCCGTAGGGGCAGGCTCTGGGTTCTCACCTaGCTCAGGGAGGGAAGGGAG +
Preference number: 4 (lower is better)
Translates to: AESDPGAWKGGCSARRGRLWVLT*LREGRE
Trigger: CTCCCTTCCCTCCCTGAGGCAGGTGAGAACCCAGAG...CCTGCCCCTACGGGCGCTGCAGCCTCCCTTCCATGCCCCAGGATCACTCTCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp AGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAACCCACTGGGAGCAGGTaGTGGGCTGACCCACCAGGA +
Preference number: 4 (lower is better)
Translates to: RVPSSGQCRGPSATLAWQPTGSR*WADPPG
Trigger: TCCTGGTGGGTCAGCCCAGCACCTGCTCCCAGTGGG...TTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp GCAGAGAGTGATCCTGGGGCATGGAAGGGAGGCTGCAGCGCCCGTAGGGGCAGGCGCTCAGACATGGCATaGCCAGCTGTGCTTTGGCCC +
Preference number: 4 (lower is better)
Translates to: AESDPGAWKGGCSARRGRRSDMA*PAVLWP
Trigger: GGGCCAAAGCACAGCTGGGCATGCCATGTCTGAGCG...CCTGCCCCTACGGGCGCTGCAGCCTCCCTTCCATGCCCCAGGATCACTCTCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp GGGCCCACCTGGAGGGAACCCTGCCTACTTCCAAGCTGGGAGAGTGCCGTCCAGAGGCCTGGAGGGCTCTaGGCCGCTCAGACATGGCAT +
Preference number: 4 (lower is better)
Translates to: GPTWREPCLLPSWESAVQRPGGL*AAQTWH
Trigger: ATGCCATGTCTGAGCGGCGCAGAGCCCTCCAGGCCT...CTGGACGGCACTCTCCCAGCTTGGAAGTAGGCAGGGTTCCCTCCAGGTGGGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp GTGGGTGGCCTCAGCATCGGAGGGGCAATGACAGTCTTGGGGAGGCATCTGGCTGCATGGAAGGGAGGCTaGAGCGCCCGTAGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: VGGLSIGGAMTVLGRHLAAWKGG*SARRGR
Trigger: CCTGCCCCTACGGGCGCTGCAGCCTCCCTTCCATGC...AGCCAGATGCCTCCCCAAGACTGTCATTGCCCCTCCGATGCTGAGGCCACCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp AGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAACCTGTGGCTGCTCCATaGCTGATCTCCCCTCGGCGC +
Preference number: 4 (lower is better)
Translates to: RVPSSGQCRGPSATLAWQPVAAP*LISPRR
Trigger: GCGCCGAGGGGAGATCAGCCATGGAGCAGCCACAGG...TTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
CDS-3UTR CCA 90 bp GCAGAGAGTGATCCTGGGGCATGGAAGGGAGGCTGCAGCGCCCGTAGGGGCAGGTCCCCCATTGAGCTCTaGGGCTCCTTCTGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: AESDPGAWKGGCSARRGRSPIEL*GSFCLC
Trigger: GCAGAGGCAGAAGGAGCCCCAGAGCTCAATGGGGGA...CCTGCCCCTACGGGCGCTGCAGCCTCCCTTCCATGCCCCAGGATCACTCTCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
CDS-3UTR CCA 90 bp GTGCCCTGCAGTGAGGGCCAACCCCCAGGACGACTGGGTGTGCCAGGCCAGCCCAGGAAGTGCATGCTGTaGTCCCCCATTGAGCTCTGG +
Preference number: 4 (lower is better)
Translates to: VPCSEGQPPGRLGVPGQPRKCML*SPIELW
Trigger: CCAGAGCTCAATGGGGGACCACAGCATGCACTTCCT...GGGCTGGCCTGGCACACCCAGTCGTCCTGGGGGTTGGCCCTCACTGCAGGGCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000337400.6
CDS-3UTR CCA 90 bp GTGCCCTGCAGTGAGGGCCAACCCCCAGGACGACTGGGTGTGCCAGGCCAGCCCACCTGTGGGTTGTACTaGCTCCCCTCGTTTGCAGTC +
Preference number: 4 (lower is better)
Translates to: VPCSEGQPPGRLGVPGQPTCGLY*LPSFAV
Trigger: GACTGCAAACGAGGGGAGCCAGTACAACCCACAGGT...GGGCTGGCCTGGCACACCCAGTCGTCCTGGGGGTTGGCCCTCACTGCAGGGCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337400.6
CDS-3UTR CCA 90 bp GGGCCCACCTGGAGGGAACCCTGCCTACTTCCAAGCTGGGAGAGTGCCGTCCAGACAAAGGGCGCCGTGTaGCTGGCTTTGCCGGTGAGG +
Preference number: 4 (lower is better)
Translates to: GPTWREPCLLPSWESAVQTKGAV*LALPVR
Trigger: CCTCACCGGCAAAGCCAGCCACACGGCGCCCTTTGT...CTGGACGGCACTCTCCCAGCTTGGAAGTAGGCAGGGTTCCCTCCAGGTGGGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp GCAGAGAGTGATCCTGGGGCATGGAAGGGAGGCTGCAGCGCCCGTAGGGGCAGGGTCTGCAGGGAGGCCTaGGTGCCGCCGTTAGTACAT +
Preference number: 4 (lower is better)
Translates to: AESDPGAWKGGCSARRGRVCREA*VPPLVH
Trigger: ATGTACTAACGGCGGCACCCAGGCCTCCCTGCAGAC...CCTGCCCCTACGGGCGCTGCAGCCTCCCTTCCATGCCCCAGGATCACTCTCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp AGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAGGGCCCCTCCAGTGCTaGCCCCATTGGAGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: RVPSSGQCRGPSATLAWQGPLQC*PHWSLQ
Trigger: CTGCAGACTCCAATGGGGCCAGCACTGGAGGGGCCC...TTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp GCAGAGAGTGATCCTGGGGCATGGAAGGGAGGCTGCAGCGCCCGTAGGGGCAGGAGGAAGAGAGCTGGCTaGAGGAAGCGGGAGAGAGGG +
Preference number: 4 (lower is better)
Translates to: AESDPGAWKGGCSARRGRRKRAG*RKRERG
Trigger: CCCTCTCTCCCGCTTCCTCCAGCCAGCTCTCTTCCT...CCTGCCCCTACGGGCGCTGCAGCCTCCCTTCCATGCCCCAGGATCACTCTCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp GCAGAGAGTGATCCTGGGGCATGGAAGGGAGGCTGCAGCGCCCGTAGGGGCAGGTGCCTACTTCCAAGCTaGGAGAGTGCCGTCCAGCGG +
Preference number: 4 (lower is better)
Translates to: AESDPGAWKGGCSARRGRCLLPS*ESAVQR
Trigger: CCGCTGGACGGCACTCTCCCAGCTTGGAAGTAGGCA...CCTGCCCCTACGGGCGCTGCAGCCTCCCTTCCATGCCCCAGGATCACTCTCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp CTACTTCCAAGCTGGGAGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCCAGCTTCAGGGGGAGTaGGGCCTGAACTCCCGTGGA +
Preference number: 4 (lower is better)
Translates to: LLPSWESAVQRPVQGAISQLQGE*GLNSRG
Trigger: TCCACGGGAGTTCAGGCCCCACTCCCCCTGAAGCTG...GCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCTCCCAGCTTGGAAGTAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp GGGCCCACCTGGAGGGAACCCTGCCTACTTCCAAGCTGGGAGAGTGCCGTCCAGGCAGGCCCCTCTCTCTaGGTTCTCACCTGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: GPTWREPCLLPSWESAVQAGPSL*VLTCLR
Trigger: CCTGAGGCAGGTGAGAACCCAGAGAGAGGGGCCTGC...CTGGACGGCACTCTCCCAGCTTGGAAGTAGGCAGGGTTCCCTCCAGGTGGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp TGGGAGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGACTGGGAGCAGGTGCTaGGCTGACCCACCAGGACCT +
Preference number: 4 (lower is better)
Translates to: WESAVQRPVQGAISNIGLTGSRC*ADPPGP
Trigger: AGGTCCTGGTGGGTCAGCCCAGCACCTGCTCCCAGT...CAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCTCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp TGGGAGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGCAGGGACCAGCGGTGTaGGACTGGTCCCACAAGGTC +
Preference number: 4 (lower is better)
Translates to: WESAVQRPVQGAISNIGLQGPAV*DWSHKV
Trigger: GACCTTGTGGGACCAGTCCCACACCGCTGGTCCCTG...CAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCTCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp CTACTTCCAAGCTGGGAGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCCAGGGACCAGCGGTGTaGGACTGGTCCCACAAGGTC +
Preference number: 4 (lower is better)
Translates to: LLPSWESAVQRPVQGAISQGPAV*DWSHKV
Trigger: GACCTTGTGGGACCAGTCCCACACCGCTGGTCCCTG...GCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCTCCCAGCTTGGAAGTAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp GAGGGAACCCTGCCTACTTCCAAGCTGGGAGAGTGCCGTCCAGCGGCCAGTGCACGTAGGGGCAGGGGCTaGGCACTTCCACCCAGAGTC +
Preference number: 4 (lower is better)
Translates to: EGTLPTSKLGECRPAASARRGRG*ALPPRV
Trigger: GACTCTGGGTGGAAGTGCCCAGCCCCTGCCCCTACG...TGCACTGGCCGCTGGACGGCACTCTCCCAGCTTGGAAGTAGGCAGGGTTCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp TCAAGGGCTGGTCAATGGAAAAGTCATGTGGGTGGGCCCCTCCAGTGCTGGCCCCCGGGGAGGGGGAGGTaGGTCCCAGCAGCTGTCCCT +
Preference number: 4 (lower is better)
Translates to: SRAGQWKSHVGGPLQCWPPGRGR*VPAAVP
Trigger: AGGGACAGCTGCTGGGACCCACCTCCCCCTCCCCGG...GGGCCAGCACTGGAGGGGCCCACCCACATGACTTTTCCATTGACCAGCCCTTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp CGTGGGACTCTGCTGCTCCAGGCCGGGTGCTCAAGGGCTGGTCAATGGAAAAGTCCGGGGAGGGGGAGGTaGGTCCCAGCAGCTGTCCCT +
Preference number: 4 (lower is better)
Translates to: RGTLLLQAGCSRAGQWKSPGRGR*VPAAVP
Trigger: AGGGACAGCTGCTGGGACCCACCTCCCCCTCCCCGG...ACTTTTCCATTGACCAGCCCTTGAGCACCCGGCCTGGAGCAGCAGAGTCCCACG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp GTGCCCTGCAGTGAGGGCCAACCCCCAGGACGACTGGGTGTGCCAGGCCAGCCCCAGGCTGGAGTGCAGTaGTGGGATTTTGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: VPCSEGQPPGRLGVPGQPQAGVQ*WDFGSL
Trigger: CAGTGAGCCAAAATCCCACCACTGCACTCCAGCCTG...GGGCTGGCCTGGCACACCCAGTCGTCCTGGGGGTTGGCCCTCACTGCAGGGCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000337400.6
CDS-3UTR TCA 90 bp AGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAGCTGTGGTCCCCCATTaGGCTCTGGGGCTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: RVPSSGQCRGPSATLAWQAVVPH*ALGLLL
Trigger: CAGAAGGAGCCCCAGAGCTCAATGGGGGACCACAGC...TTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
CDS-3UTR TCA 90 bp AACCCCCATCAGCTGGGTAGGTGGGGAGCGGGAAGAATCCTGCCAGCAGAGAGTCCCGGCACTCCATGTTaGGGCTGCCGCATGAGGCCC +
Preference number: 4 (lower is better)
Translates to: NPHQLGRWGAGRILPAESPGTPC*GCRMRP
Trigger: GGGCCTCATGCGGCAGCCTCAACATGGAGTGCCGGG...ACTCTCTGCTGGCAGGATTCTTCCCGCTCCCCACCTACCCAGCTGATGGGGGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000448077.6
CDS-3UTR TCA 90 bp GCAGAGAGTGATCCTGGGGCATGGAAGGGAGGCTGCAGCGCCCGTAGGGGCAGGACGGATAGCGTTGTGTaGCATGCCCAGTGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: AESDPGAWKGGCSARRGRTDSVV*HAQCQA
Trigger: TGCCTGGCACTGGGCATGTCACACAACGCTATCCGT...CCTGCCCCTACGGGCGCTGCAGCCTCCCTTCCATGCCCCAGGATCACTCTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000448077.6
CDS-3UTR TCA 90 bp CCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAACCAGTCTTGCTCCTCTTCAGTaGGGTGGGGGCCCACCTGGA +
Preference number: 4 (lower is better)
Translates to: PSSGQCRGPSATLAWQTSLAPLQ*GGGPPG
Trigger: TCCAGGTGGGCCCCCACCTCACTGAAGAGGAGCAAG...ACTGGTTTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR TCA 90 bp AGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAACCAGTGTGAAGGAGCTCTCCCTGGCCTaGCCCCAGGACTCAGACCCC +
Preference number: 4 (lower is better)
Translates to: SGQCRGPSATLAWQTSVKELSLA*PQDSDP
Trigger: GGGGTCTGAGTCCTGGGGTCAGGCCAGGGAGAGCTC...CTTCACACTGGTTTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR TCA 90 bp AGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAACCAGTGTGAAGAGGGGGAGTGGGGCCTaGACTCCCGTGGAGCCAGCT +
Preference number: 4 (lower is better)
Translates to: SGQCRGPSATLAWQTSVKRGSGA*TPVEPA
Trigger: AGCTGGCTCCACGGGAGTTCAGGCCCCACTCCCCCT...CTTCACACTGGTTTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR TCA 90 bp GTGGGTGGCCTCAGCATCGGAGGGGCAATGACAGTCTTGGGGAGGCATCTGGCTGGTGGCCAGCTGGGCTaGGTAAAGGGGAAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: VGGLSIGGAMTVLGRHLAGGQLG*VKGKGR
Trigger: CCTCCCCTTCCCCTTTACTCAGCCCAGCTGGCCACC...AGCCAGATGCCTCCCCAAGACTGTCATTGCCCCTCCGATGCTGAGGCCACCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR TCA 90 bp GAGGGAACCCTGCCTACTTCCAAGCTGGGAGAGTGCCGTCCAGCGGCCAGTGCAGCTTTGGCCCTGCTCTaGGGTGAGCGCACCTCAACC +
Preference number: 4 (lower is better)
Translates to: EGTLPTSKLGECRPAASAALALL*GERTST
Trigger: GGTTGAGGTGCGCTCACCTCAGAGCAGGGCCAAAGC...TGCACTGGCCGCTGGACGGCACTCTCCCAGCTTGGAAGTAGGCAGGGTTCCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp GCAGAGAGTGATCCTGGGGCATGGAAGGGAGGCTGCAGCGCCCGTAGGGGCAGGCCGTCACAGCCCATCTaGAGTTGGTCCAGCAGTGAG +
Preference number: 4 (lower is better)
Translates to: AESDPGAWKGGCSARRGRPSQPI*SWSSSE
Trigger: CTCACTGCTGGACCAACTGCAGATGGGCTGTGACGG...CCTGCCCCTACGGGCGCTGCAGCCTCCCTTCCATGCCCCAGGATCACTCTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000448077.6
CDS-3UTR GCA 90 bp GAGGGAACCCTGCCTACTTCCAAGCTGGGAGAGTGCCGTCCAGCGGCCAGTGCACTGGCTCCCCTCGTTTaGAGTCAGCCCTGCCACCAG +
Preference number: 4 (lower is better)
Translates to: EGTLPTSKLGECRPAASALAPLV*SQPCHQ
Trigger: CTGGTGGCAGGGCTGACTGCAAACGAGGGGAGCCAG...TGCACTGGCCGCTGGACGGCACTCTCCCAGCTTGGAAGTAGGCAGGGTTCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp CCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAACCAGTCTGGCTCCCCTCGTTTaGAGTCAGCCCTGCCACCAG +
Preference number: 4 (lower is better)
Translates to: PSSGQCRGPSATLAWQTSLAPLV*SQPCHQ
Trigger: CTGGTGGCAGGGCTGACTGCAAACGAGGGGAGCCAG...ACTGGTTTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp GCAGAGAGTGATCCTGGGGCATGGAAGGGAGGCTGCAGCGCCCGTAGGGGCAGGTCAGGGTGGTTGGCCTaGAGGTGGAATTCGAGGGCA +
Preference number: 4 (lower is better)
Translates to: AESDPGAWKGGCSARRGRSGWLA*RWNSRA
Trigger: TGCCCTCGAATTCCACCTGCAGGCCAACCACCCTGA...CCTGCCCCTACGGGCGCTGCAGCCTCCCTTCCATGCCCCAGGATCACTCTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp GGGCCCACCTGGAGGGAACCCTGCCTACTTCCAAGCTGGGAGAGTGCCGTCCAGTCCTGGAGCAGAGGGTaGAGCGAGGTCTCGGTTTCG +
Preference number: 4 (lower is better)
Translates to: GPTWREPCLLPSWESAVQSWSRG*SEVSVS
Trigger: CGAAACCGAGACCTCGCTGCACCCTCTGCTCCAGGA...CTGGACGGCACTCTCCCAGCTTGGAAGTAGGCAGGGTTCCCTCCAGGTGGGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp CCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAACCAGTTCCAAGCTGGGAGAGTaGCGTCCAGCGGCCAGTGCA +
Preference number: 4 (lower is better)
Translates to: PSSGQCRGPSATLAWQTSSKLGE*RPAASA
Trigger: TGCACTGGCCGCTGGACGGCACTCTCCCAGCTTGGA...ACTGGTTTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp TGGGAGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGCTCTGGGTTCTCACCTaGCTCAGGGAGGGAAGGGAG +
Preference number: 4 (lower is better)
Translates to: WESAVQRPVQGAISNIGLLWVLT*LREGRE
Trigger: CTCCCTTCCCTCCCTGAGGCAGGTGAGAACCCAGAG...CAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCTCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp TCAAGGGCTGGTCAATGGAAAAGTCATGTGGGTGGGCCCCTCCAGTGCTGGCCCTGGCCCAGCCCTGCCTaGTCACCTGCAGGCCCCTCT +
Preference number: 4 (lower is better)
Translates to: SRAGQWKSHVGGPLQCWPWPSPA*SPAGPS
Trigger: AGAGGGGCCTGCAGGTGAGCAGGCAGGGCTGGGCCA...GGGCCAGCACTGGAGGGGCCCACCCACATGACTTTTCCATTGACCAGCCCTTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp CTACTTCCAAGCTGGGAGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCGCTGTGCTTTGGCCCTaGTCTGAGGTGAGCGCACCT +
Preference number: 4 (lower is better)
Translates to: LLPSWESAVQRPVQGAISAVLWP*SEVSAP
Trigger: AGGTGCGCTCACCTCAGAGCAGGGCCAAAGCACAGC...GCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCTCCCAGCTTGGAAGTAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp TGGGAGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGCGCTCAGACATGGCATaGCCAGCTGTGCTTTGGCCC +
Preference number: 4 (lower is better)
Translates to: WESAVQRPVQGAISNIGLRSDMA*PAVLWP
Trigger: GGGCCAAAGCACAGCTGGGCATGCCATGTCTGAGCG...CAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCTCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp CCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAACCAGTAGGCCTGGAGGGCTCTaGGCCGCTCAGACATGGCAT +
Preference number: 4 (lower is better)
Translates to: PSSGQCRGPSATLAWQTSRPGGL*AAQTWH
Trigger: ATGCCATGTCTGAGCGGCGCAGAGCCCTCCAGGCCT...ACTGGTTTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp GTGCCCTGCAGTGAGGGCCAACCCCCAGGACGACTGGGTGTGCCAGGCCAGCCCGGGATTACAGGCGCGTaGCACCACATCTGGCTAATT +
Preference number: 4 (lower is better)
Translates to: VPCSEGQPPGRLGVPGQPGITGA*HHIWLI
Trigger: AATTAGCCAGATGTGGTGGCACGCGCCTGTAATCCC...GGGCTGGCCTGGCACACCCAGTCGTCCTGGGGGTTGGCCCTCACTGCAGGGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337400.6
CDS-3UTR CCA 90 bp TGGGAGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGTCCCCCATTGAGCTCTaGGGCTCCTTCTGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: WESAVQRPVQGAISNIGLSPIEL*GSFCLC
Trigger: GCAGAGGCAGAAGGAGCCCCAGAGCTCAATGGGGGA...CAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCTCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
CDS-3UTR CCA 90 bp GAGGGAACCCTGCCTACTTCCAAGCTGGGAGAGTGCCGTCCAGCGGCCAGTGCACAGGTCGGCCACCTGTaGGTTGTACTGGCTCCCCTC +
Preference number: 4 (lower is better)
Translates to: EGTLPTSKLGECRPAASAQVGHL*VVLAPL
Trigger: GAGGGGAGCCAGTACAACCCACAGGTGGCCGACCTG...TGCACTGGCCGCTGGACGGCACTCTCCCAGCTTGGAAGTAGGCAGGGTTCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp AGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAACAAAGGGCGCCGTGTaGCTGGCTTTGCCGGTGAGG +
Preference number: 4 (lower is better)
Translates to: RVPSSGQCRGPSATLAWQTKGAV*LALPVR
Trigger: CCTCACCGGCAAAGCCAGCCACACGGCGCCCTTTGT...TTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp GCAGAGAGTGATCCTGGGGCATGGAAGGGAGGCTGCAGCGCCCGTAGGGGCAGGCCAGCATGGCGAAGATaGCCTCGTGCACGCCATACT +
Preference number: 4 (lower is better)
Translates to: AESDPGAWKGGCSARRGRPAWRR*PRARHT
Trigger: AGTATGGCGTGCACGAGGCCATCTTCGCCATGCTGG...CCTGCCCCTACGGGCGCTGCAGCCTCCCTTCCATGCCCCAGGATCACTCTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp TGGGAGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGCGCAGGATGGTGTCCTaGATAGCCTCCACCCGTGGA +
Preference number: 4 (lower is better)
Translates to: WESAVQRPVQGAISNIGLRRMVS*IASTRG
Trigger: TCCACGGGTGGAGGCTATCCAGGACACCATCCTGCG...CAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCTCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp GGGCCCACCTGGAGGGAACCCTGCCTACTTCCAAGCTGGGAGAGTGCCGTCCAGCGCAGGATGGTGTCCTaGATAGCCTCCACCCGTGGA +
Preference number: 4 (lower is better)
Translates to: GPTWREPCLLPSWESAVQRRMVS*IASTRG
Trigger: TCCACGGGTGGAGGCTATCCAGGACACCATCCTGCG...CTGGACGGCACTCTCCCAGCTTGGAAGTAGGCAGGGTTCCCTCCAGGTGGGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp CTACTTCCAAGCTGGGAGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAGGAAGAGAGCTGGCTaGAGGAAGCGGGAGAGAGGG +
Preference number: 4 (lower is better)
Translates to: LLPSWESAVQRPVQGAISRKRAG*RKRERG
Trigger: CCCTCTCTCCCGCTTCCTCCAGCCAGCTCTCTTCCT...GCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCTCCCAGCTTGGAAGTAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp GAGGGAACCCTGCCTACTTCCAAGCTGGGAGAGTGCCGTCCAGCGGCCAGTGCAAGGTGGGGGCCCACCTaGAGGGAACCCTGCCTACTT +
Preference number: 4 (lower is better)
Translates to: EGTLPTSKLGECRPAASARWGPT*REPCLL
Trigger: AAGTAGGCAGGGTTCCCTCCAGGTGGGCCCCCACCT...TGCACTGGCCGCTGGACGGCACTCTCCCAGCTTGGAAGTAGGCAGGGTTCCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp GCAGAGAGTGATCCTGGGGCATGGAAGGGAGGCTGCAGCGCCCGTAGGGGCAGGGATGCTGACACAATGTaGGCGGCTGCTACTGGGCAG +
Preference number: 4 (lower is better)
Translates to: AESDPGAWKGGCSARRGRDADTM*AAATGQ
Trigger: CTGCCCAGTAGCAGCCGCCCACATTGTGTCAGCATC...CCTGCCCCTACGGGCGCTGCAGCCTCCCTTCCATGCCCCAGGATCACTCTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp CTACTTCCAAGCTGGGAGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCTGTGAGGCCAGGCCCTaGCCCTGGATGCTGACACAA +
Preference number: 4 (lower is better)
Translates to: LLPSWESAVQRPVQGAISCEARP*PWMLTQ
Trigger: TTGTGTCAGCATCCAGGGCCAGGGCCTGGCCTCACA...GCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCTCCCAGCTTGGAAGTAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp CCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAACCAGTCAGCTTCAGGGGGAGTaGGGCCTGAACTCCCGTGGA +
Preference number: 4 (lower is better)
Translates to: PSSGQCRGPSATLAWQTSQLQGE*GLNSRG
Trigger: TCCACGGGAGTTCAGGCCCCACTCCCCCTGAAGCTG...ACTGGTTTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp GAGGGAACCCTGCCTACTTCCAAGCTGGGAGAGTGCCGTCCAGCGGCCAGTGCAGCAGGCCCCTCTCTCTaGGTTCTCACCTGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: EGTLPTSKLGECRPAASAAGPSL*VLTCLR
Trigger: CCTGAGGCAGGTGAGAACCCAGAGAGAGGGGCCTGC...TGCACTGGCCGCTGGACGGCACTCTCCCAGCTTGGAAGTAGGCAGGGTTCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp CCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAACCAGTACTGGGAGCAGGTGCTaGGCTGACCCACCAGGACCT +
Preference number: 4 (lower is better)
Translates to: PSSGQCRGPSATLAWQTSTGSRC*ADPPGP
Trigger: AGGTCCTGGTGGGTCAGCCCAGCACCTGCTCCCAGT...ACTGGTTTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp GTGGGTGGCCTCAGCATCGGAGGGGCAATGACAGTCTTGGGGAGGCATCTGGCTCCAGCGGTGTGGGACTaGTCCCACAAGGTCCCCGGA +
Preference number: 4 (lower is better)
Translates to: VGGLSIGGAMTVLGRHLAPAVWD*SHKVPG
Trigger: TCCGGGGACCTTGTGGGACCAGTCCCACACCGCTGG...AGCCAGATGCCTCCCCAAGACTGTCATTGCCCCTCCGATGCTGAGGCCACCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp GAGGGAACCCTGCCTACTTCCAAGCTGGGAGAGTGCCGTCCAGCGGCCAGTGCACAGGGACCAGCGGTGTaGGACTGGTCCCACAAGGTC +
Preference number: 4 (lower is better)
Translates to: EGTLPTSKLGECRPAASAQGPAV*DWSHKV
Trigger: GACCTTGTGGGACCAGTCCCACACCGCTGGTCCCTG...TGCACTGGCCGCTGGACGGCACTCTCCCAGCTTGGAAGTAGGCAGGGTTCCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp CGTGGGACTCTGCTGCTCCAGGCCGGGTGCTCAAGGGCTGGTCAATGGAAAAGTTTGCCCCTGCAGGCCTaGAGGGCTCTGCGCCGCTCA +
Preference number: 4 (lower is better)
Translates to: RGTLLLQAGCSRAGQWKSLPLQA*RALRRS
Trigger: TGAGCGGCGCAGAGCCCTCCAGGCCTGCAGGGGCAA...ACTTTTCCATTGACCAGCCCTTGAGCACCCGGCCTGGAGCAGCAGAGTCCCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp GAGGGAACCCTGCCTACTTCCAAGCTGGGAGAGTGCCGTCCAGCGGCCAGTGCAAGTGATCCTGGGGCATaGAAGGGAGGCTGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: EGTLPTSKLGECRPAASASDPGA*KGGCSA
Trigger: GGCGCTGCAGCCTCCCTTCCATGCCCCAGGATCACT...TGCACTGGCCGCTGGACGGCACTCTCCCAGCTTGGAAGTAGGCAGGGTTCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp CCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAACCAGTAGTGATCCTGGGGCATaGAAGGGAGGCTGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: PSSGQCRGPSATLAWQTSSDPGA*KGGCSA
Trigger: GGCGCTGCAGCCTCCCTTCCATGCCCCAGGATCACT...ACTGGTTTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp GCAGAGAGTGATCCTGGGGCATGGAAGGGAGGCTGCAGCGCCCGTAGGGGCAGGCATCAGCTGGGTAGGTaGGGAGCGGGAAGAATCCTG +
Preference number: 4 (lower is better)
Translates to: AESDPGAWKGGCSARRGRHQLGR*GAGRIL
Trigger: CAGGATTCTTCCCGCTCCCCACCTACCCAGCTGATG...CCTGCCCCTACGGGCGCTGCAGCCTCCCTTCCATGCCCCAGGATCACTCTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp GAGGGAACCCTGCCTACTTCCAAGCTGGGAGAGTGCCGTCCAGCGGCCAGTGCACCAACCCCCATCAGCTaGGTAGGTGGGGAGCGGGAA +
Preference number: 4 (lower is better)
Translates to: EGTLPTSKLGECRPAASAPTPIS*VGGERE
Trigger: TTCCCGCTCCCCACCTACCCAGCTGATGGGGGTTGG...TGCACTGGCCGCTGGACGGCACTCTCCCAGCTTGGAAGTAGGCAGGGTTCCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR TCA 90 bp CGTGGGACTCTGCTGCTCCAGGCCGGGTGCTCAAGGGCTGGTCAATGGAAAAGTCCCGTGGAACGTTCATaGGGCCTGGCCGGTCTCCAC +
Preference number: 4 (lower is better)
Translates to: RGTLLLQAGCSRAGQWKSPVERS*GLAGLH
Trigger: GTGGAGACCGGCCAGGCCTCATGAACGTTCCACGGG...ACTTTTCCATTGACCAGCCCTTGAGCACCCGGCCTGGAGCAGCAGAGTCCCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR TCA 90 bp AGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAACCAGTGTGAAGTCTGGGCGTGCTCGGTaGCCAGTTGCCGCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: SGQCRGPSATLAWQTSVKSGRAR*PVAAGQ
Trigger: CTGACCTGCGGCAACTGGTCACCGAGCACGCCCAGA...CTTCACACTGGTTTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR TCA 90 bp TCAAGGGCTGGTCAATGGAAAAGTCATGTGGGTGGGCCCCTCCAGTGCTGGCCCTCTGGGCGTGCTCGGTaGCCAGTTGCCGCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: SRAGQWKSHVGGPLQCWPSGRAR*PVAAGQ
Trigger: CTGACCTGCGGCAACTGGTCACCGAGCACGCCCAGA...GGGCCAGCACTGGAGGGGCCCACCCACATGACTTTTCCATTGACCAGCCCTTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR TCA 90 bp GCAGAGAGTGATCCTGGGGCATGGAAGGGAGGCTGCAGCGCCCGTAGGGGCAGGCGGTTTCGGTCTTCTTaGTCCGCTGCATCATCTGGG +
Preference number: 4 (lower is better)
Translates to: AESDPGAWKGGCSARRGRRFRSS*SAASSG
Trigger: CCCAGATGATGCAGCGGATCAAGAAGACCGAAACCG...CCTGCCCCTACGGGCGCTGCAGCCTCCCTTCCATGCCCCAGGATCACTCTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR TCA 90 bp CTACTTCCAAGCTGGGAGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCTGGGTGTCATGTGTCTaGGGGCGATCGTGGGACTCT +
Preference number: 4 (lower is better)
Translates to: LLPSWESAVQRPVQGAISWVSCV*GRSWDS
Trigger: AGAGTCCCACGATCGCCCTCAGACACATGACACCCA...GCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCTCCCAGCTTGGAAGTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR TCA 90 bp AACCCCCATCAGCTGGGTAGGTGGGGAGCGGGAAGAATCCTGCCAGCAGAGAGTAGCCTGCAGGTGCAATaGTGGGGCAGAGGGCAGGCC +
Preference number: 4 (lower is better)
Translates to: NPHQLGRWGAGRILPAESSLQVQ*WGRGQA
Trigger: GGCCTGCCCTCTGCCCCATCATTGCACCTGCAGGCT...ACTCTCTGCTGGCAGGATTCTTCCCGCTCCCCACCTACCCAGCTGATGGGGGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR TCA 90 bp GAGGGAACCCTGCCTACTTCCAAGCTGGGAGAGTGCCGTCCAGCGGCCAGTGCAGCATCGGAGGGGCAATaGCAGTCTTGGGGAGGCATC +
Preference number: 4 (lower is better)
Translates to: EGTLPTSKLGECRPAASAASEGQ*QSWGGI
Trigger: GATGCCTCCCCAAGACTGTCATTGCCCCTCCGATGC...TGCACTGGCCGCTGGACGGCACTCTCCCAGCTTGGAAGTAGGCAGGGTTCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR TCA 90 bp GCAGAGAGTGATCCTGGGGCATGGAAGGGAGGCTGCAGCGCCCGTAGGGGCAGGCCTGGCAAACCAGTGTaGAGATGGAAGGACACTGGG +
Preference number: 4 (lower is better)
Translates to: AESDPGAWKGGCSARRGRPGKPV*RWKDTG
Trigger: CCCAGTGTCCTTCCATCTTCACACTGGTTTGCCAGG...CCTGCCCCTACGGGCGCTGCAGCCTCCCTTCCATGCCCCAGGATCACTCTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR TCA 90 bp CGTGGGACTCTGCTGCTCCAGGCCGGGTGCTCAAGGGCTGGTCAATGGAAAAGTGGCCCTGCTCTGAGGTaGGCGCACCTCAACCTGGGA +
Preference number: 4 (lower is better)
Translates to: RGTLLLQAGCSRAGQWKSGPALR*AHLNLG
Trigger: TCCCAGGTTGAGGTGCGCTCACCTCAGAGCAGGGCC...ACTTTTCCATTGACCAGCCCTTGAGCACCCGGCCTGGAGCAGCAGAGTCCCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR TCA 90 bp CTACTTCCAAGCTGGGAGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCCAGGAAGCCTGGGCTTaGACCCCAGTTCTCCTACCT +
Preference number: 4 (lower is better)
Translates to: LLPSWESAVQRPVQGAISQEAWA*TPVLLP
Trigger: AGGTAGGAGAACTGGGGTTCAAGCCCAGGCTTCCTG...GCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCTCCCAGCTTGGAAGTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR TCA 90 bp GCAGAGAGTGATCCTGGGGCATGGAAGGGAGGCTGCAGCGCCCGTAGGGGCAGGTTCATAGCCTTGGCCTaGAAGGAAGCACCCCAACCC +
Preference number: 4 (lower is better)
Translates to: AESDPGAWKGGCSARRGRFIALA*KEAPQP
Trigger: GGGTTGGGGTGCTTCCTTTCAGGCCAAGGCTATGAA...CCTGCCCCTACGGGCGCTGCAGCCTCCCTTCCATGCCCCAGGATCACTCTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp AGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAGCTTCCTCCTGTGGCTaGTCCATGGCTGATCTCCCC +
Preference number: 4 (lower is better)
Translates to: RVPSSGQCRGPSATLAWQASSCG*SMADLP
Trigger: GGGGAGATCAGCCATGGAGCAGCCACAGGAGGAAGC...TTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
CDS-3UTR GCA 90 bp GCAGAGAGTGATCCTGGGGCATGGAAGGGAGGCTGCAGCGCCCGTAGGGGCAGGCTGGAAGGAAGTGCATaGTGTGGTCCCCCATTGAGC +
Preference number: 4 (lower is better)
Translates to: AESDPGAWKGGCSARRGRLEGSA*CGPPLS
Trigger: GCTCAATGGGGGACCACAGCATGCACTTCCTTCCAG...CCTGCCCCTACGGGCGCTGCAGCCTCCCTTCCATGCCCCAGGATCACTCTCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
CDS-3UTR GCA 90 bp CTACTTCCAAGCTGGGAGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCCGGTCTCCACTGTGGTaGACTGGCAGCGGTAGAAGA +
Preference number: 4 (lower is better)
Translates to: LLPSWESAVQRPVQGAISRSPLW*TGSGRR
Trigger: TCTTCTACCGCTGCCAGTGCACCACAGTGGAGACCG...GCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCTCCCAGCTTGGAAGTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp TGGGAGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGTGCTCGGTGACCAGTTaGCGCAGGTCAGCCATCTTC +
Preference number: 4 (lower is better)
Translates to: WESAVQRPVQGAISNIGLCSVTS*RRSAIF
Trigger: GAAGATGGCTGACCTGCGGCAACTGGTCACCGAGCA...CAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCTCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp AGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAATGCATCATCTGGGCGTaGTCGGTGACCAGTTGCCGC +
Preference number: 4 (lower is better)
Translates to: RVPSSGQCRGPSATLAWQCIIWA*SVTSCR
Trigger: GCGGCAACTGGTCACCGAGCACGCCCAGATGATGCA...TTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp GAGGGAACCCTGCCTACTTCCAAGCTGGGAGAGTGCCGTCCAGCGGCCAGTGCATGCATCATCTGGGCGTaGTCGGTGACCAGTTGCCGC +
Preference number: 4 (lower is better)
Translates to: EGTLPTSKLGECRPAASACIIWA*SVTSCR
Trigger: GCGGCAACTGGTCACCGAGCACGCCCAGATGATGCA...TGCACTGGCCGCTGGACGGCACTCTCCCAGCTTGGAAGTAGGCAGGGTTCCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp GAGGGAACCCTGCCTACTTCCAAGCTGGGAGAGTGCCGTCCAGCGGCCAGTGCATCCTGGAGCAGAGGGTaGAGCGAGGTCTCGGTTTCG +
Preference number: 4 (lower is better)
Translates to: EGTLPTSKLGECRPAASASWSRG*SEVSVS
Trigger: CGAAACCGAGACCTCGCTGCACCCTCTGCTCCAGGA...TGCACTGGCCGCTGGACGGCACTCTCCCAGCTTGGAAGTAGGCAGGGTTCCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp CCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAACCAGTATCGTGGGACTCTGCTaGTCCAGGCCGGGTGCTCAA +
Preference number: 4 (lower is better)
Translates to: PSSGQCRGPSATLAWQTSIVGLC*SRPGAQ
Trigger: TTGAGCACCCGGCCTGGAGCAGCAGAGTCCCACGAT...ACTGGTTTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp AGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAACCAGTGTGAAGGCGATCGTGGGACTCTaGTGCTCCAGGCCGGGTGCT +
Preference number: 4 (lower is better)
Translates to: SGQCRGPSATLAWQTSVKAIVGL*CSRPGA
Trigger: AGCACCCGGCCTGGAGCAGCAGAGTCCCACGATCGC...CTTCACACTGGTTTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp TGGGAGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGACCTGGAGGGAACCCTaGCTACTTCCAAGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: WESAVQRPVQGAISNIGLTWREP*LLPSWE
Trigger: CTCCCAGCTTGGAAGTAGGCAGGGTTCCCTCCAGGT...CAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCTCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp TCAAGGGCTGGTCAATGGAAAAGTCATGTGGGTGGGCCCCTCCAGTGCTGGCCCCCCACTGGGAGCAGGTaGTGGGCTGACCCACCAGGA +
Preference number: 4 (lower is better)
Translates to: SRAGQWKSHVGGPLQCWPPTGSR*WADPPG
Trigger: TCCTGGTGGGTCAGCCCAGCACCTGCTCCCAGTGGG...GGGCCAGCACTGGAGGGGCCCACCCACATGACTTTTCCATTGACCAGCCCTTGA
63% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp CCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAACCAGTGCTGTGCTTTGGCCCTaGTCTGAGGTGAGCGCACCT +
Preference number: 4 (lower is better)
Translates to: PSSGQCRGPSATLAWQTSAVLWP*SEVSAP
Trigger: AGGTGCGCTCACCTCAGAGCAGGGCCAAAGCACAGC...ACTGGTTTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp CCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAACCAGTTCCCCCATTGAGCTCTaGGGCTCCTTCTGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: PSSGQCRGPSATLAWQTSSPIEL*GSFCLC
Trigger: GCAGAGGCAGAAGGAGCCCCAGAGCTCAATGGGGGA...ACTGGTTTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
CDS-3UTR CCA 90 bp GCAGAGAGTGATCCTGGGGCATGGAAGGGAGGCTGCAGCGCCCGTAGGGGCAGGACCTGTGGGTTGTACTaGCTCCCCTCGTTTGCAGTC +
Preference number: 4 (lower is better)
Translates to: AESDPGAWKGGCSARRGRTCGLY*LPSFAV
Trigger: GACTGCAAACGAGGGGAGCCAGTACAACCCACAGGT...CCTGCCCCTACGGGCGCTGCAGCCTCCCTTCCATGCCCCAGGATCACTCTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp CCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAACCAGTCAAAGCCACTGCCGTTaGCTACCAGCAGCCCGTCCT +
Preference number: 4 (lower is better)
Translates to: PSSGQCRGPSATLAWQTSQSHCR*LPAARP
Trigger: AGGACGGGCTGCTGGTAGCCAACGGCAGTGGCTTTG...ACTGGTTTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp AGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAACAAAGCCACTGCCGTTaGCTACCAGCAGCCCGTCCT +
Preference number: 4 (lower is better)
Translates to: RVPSSGQCRGPSATLAWQQSHCR*LPAARP
Trigger: AGGACGGGCTGCTGGTAGCCAACGGCAGTGGCTTTG...TTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp GAGGGAACCCTGCCTACTTCCAAGCTGGGAGAGTGCCGTCCAGCGGCCAGTGCATGGTTGGCCTGCAGGTaGAATTCGAGGGCACGCAGG +
Preference number: 4 (lower is better)
Translates to: EGTLPTSKLGECRPAASAWLACR*NSRARR
Trigger: CCTGCGTGCCCTCGAATTCCACCTGCAGGCCAACCA...TGCACTGGCCGCTGGACGGCACTCTCCCAGCTTGGAAGTAGGCAGGGTTCCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp AGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAATGGTTGGCCTGCAGGTaGAATTCGAGGGCACGCAGG +
Preference number: 4 (lower is better)
Translates to: RVPSSGQCRGPSATLAWQWLACR*NSRARR
Trigger: CCTGCGTGCCCTCGAATTCCACCTGCAGGCCAACCA...TTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp TGGGAGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGGGCATCAGGGTGGTTaGCCTGCAGGTGGAATTCGA +
Preference number: 4 (lower is better)
Translates to: WESAVQRPVQGAISNIGLGHQGG*PAGGIR
Trigger: TCGAATTCCACCTGCAGGCCAACCACCCTGATGCCC...CAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCTCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp CTACTTCCAAGCTGGGAGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCGGGCATCAGGGTGGTTaGCCTGCAGGTGGAATTCGA +
Preference number: 4 (lower is better)
Translates to: LLPSWESAVQRPVQGAISGHQGG*PAGGIR
Trigger: TCGAATTCCACCTGCAGGCCAACCACCCTGATGCCC...GCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCTCCCAGCTTGGAAGTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp GAGGGAACCCTGCCTACTTCCAAGCTGGGAGAGTGCCGTCCAGCGGCCAGTGCAAGGAAGAGAGCTGGCTaGAGGAAGCGGGAGAGAGGG +
Preference number: 4 (lower is better)
Translates to: EGTLPTSKLGECRPAASARKRAG*RKRERG
Trigger: CCCTCTCTCCCGCTTCCTCCAGCCAGCTCTCTTCCT...TGCACTGGCCGCTGGACGGCACTCTCCCAGCTTGGAAGTAGGCAGGGTTCCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp AGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAAGGAAGAGAGCTGGCTaGAGGAAGCGGGAGAGAGGG +
Preference number: 4 (lower is better)
Translates to: RVPSSGQCRGPSATLAWQRKRAG*RKRERG
Trigger: CCCTCTCTCCCGCTTCCTCCAGCCAGCTCTCTTCCT...TTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp TGGGAGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGAGACAGGAAGAGAGCTaGCTGGAGGAAGCGGGAGAG +
Preference number: 4 (lower is better)
Translates to: WESAVQRPVQGAISNIGLRQEES*LEEAGE
Trigger: CTCTCCCGCTTCCTCCAGCCAGCTCTCTTCCTGTCT...CAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCTCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp TGGGAGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGTGGAGCAGGATCAGTTaGGTCAGTGGGTGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: WESAVQRPVQGAISNIGLWSRIS*VSGWPQ
Trigger: CTGAGGCCACCCACTGACCCAACTGATCCTGCTCCA...CAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCTCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp CCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAACCAGTTGCCTACTTCCAAGCTaGGAGAGTGCCGTCCAGCGG +
Preference number: 4 (lower is better)
Translates to: PSSGQCRGPSATLAWQTSCLLPS*ESAVQR
Trigger: CCGCTGGACGGCACTCTCCCAGCTTGGAAGTAGGCA...ACTGGTTTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp AGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAATGCCTACTTCCAAGCTaGGAGAGTGCCGTCCAGCGG +
Preference number: 4 (lower is better)
Translates to: RVPSSGQCRGPSATLAWQCLLPS*ESAVQR
Trigger: CCGCTGGACGGCACTCTCCCAGCTTGGAAGTAGGCA...TTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp CCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAACCAGTTCCTCTTCAGTGAGGTaGGGGCCCACCTGGAGGGAA +
Preference number: 4 (lower is better)
Translates to: PSSGQCRGPSATLAWQTSSSSVR*GPTWRE
Trigger: TTCCCTCCAGGTGGGCCCCCACCTCACTGAAGAGGA...ACTGGTTTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp GAGGGAACCCTGCCTACTTCCAAGCTGGGAGAGTGCCGTCCAGCGGCCAGTGCATGTGAGGCCAGGCCCTaGCCCTGGATGCTGACACAA +
Preference number: 4 (lower is better)
Translates to: EGTLPTSKLGECRPAASACEARP*PWMLTQ
Trigger: TTGTGTCAGCATCCAGGGCCAGGGCCTGGCCTCACA...TGCACTGGCCGCTGGACGGCACTCTCCCAGCTTGGAAGTAGGCAGGGTTCCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp GGGCCCACCTGGAGGGAACCCTGCCTACTTCCAAGCTGGGAGAGTGCCGTCCAGGGGCCTGAACTCCCGTaGAGCCAGCTAGAGAAAGGA +
Preference number: 4 (lower is better)
Translates to: GPTWREPCLLPSWESAVQGPELP*SQLEKG
Trigger: TCCTTTCTCTAGCTGGCTCCACGGGAGTTCAGGCCC...CTGGACGGCACTCTCCCAGCTTGGAAGTAGGCAGGGTTCCCTCCAGGTGGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp CTACTTCCAAGCTGGGAGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCCTTATGTGTGTGTGCTaGAGGGGCAGCTTCAGGGGG +
Preference number: 4 (lower is better)
Translates to: LLPSWESAVQRPVQGAISLMCVC*RGSFRG
Trigger: CCCCCTGAAGCTGCCCCTCCAGCACACACACATAAG...GCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCTCCCAGCTTGGAAGTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp TGGGAGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGCTTATGTGTGTGTGCTaGAGGGGCAGCTTCAGGGGG +
Preference number: 4 (lower is better)
Translates to: WESAVQRPVQGAISNIGLLMCVC*RGSFRG
Trigger: CCCCCTGAAGCTGCCCCTCCAGCACACACACATAAG...CAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCTCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp GTGGGTGGCCTCAGCATCGGAGGGGCAATGACAGTCTTGGGGAGGCATCTGGCTGCAGGCCCCTCTCTCTaGGTTCTCACCTGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: VGGLSIGGAMTVLGRHLAAGPSL*VLTCLR
Trigger: CCTGAGGCAGGTGAGAACCCAGAGAGAGGGGCCTGC...AGCCAGATGCCTCCCCAAGACTGTCATTGCCCCTCCGATGCTGAGGCCACCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp AGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAACCAGTGTGAAGCCAGCGGTGTGGGACTaGTCCCACAAGGTCCCCGGA +
Preference number: 4 (lower is better)
Translates to: SGQCRGPSATLAWQTSVKPAVWD*SHKVPG
Trigger: TCCGGGGACCTTGTGGGACCAGTCCCACACCGCTGG...CTTCACACTGGTTTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp CTACTTCCAAGCTGGGAGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCTGCGCCGCTCAGACATaGCATGCCCAGCTGTGCTTT +
Preference number: 4 (lower is better)
Translates to: LLPSWESAVQRPVQGAISCAAQT*HAQLCF
Trigger: AAAGCACAGCTGGGCATGCCATGTCTGAGCGGCGCA...GCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCTCCCAGCTTGGAAGTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp GGGCCCACCTGGAGGGAACCCTGCCTACTTCCAAGCTGGGAGAGTGCCGTCCAGTGCGCCGCTCAGACATaGCATGCCCAGCTGTGCTTT +
Preference number: 4 (lower is better)
Translates to: GPTWREPCLLPSWESAVQCAAQT*HAQLCF
Trigger: AAAGCACAGCTGGGCATGCCATGTCTGAGCGGCGCA...CTGGACGGCACTCTCCCAGCTTGGAAGTAGGCAGGGTTCCCTCCAGGTGGGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp GCAGAGAGTGATCCTGGGGCATGGAAGGGAGGCTGCAGCGCCCGTAGGGGCAGGGAGTCACACACAGAATaGCTCCTTGGGAGGGAGGAC +
Preference number: 4 (lower is better)
Translates to: AESDPGAWKGGCSARRGRESHTE*LLGRED
Trigger: GTCCTCCCTCCCAAGGAGCCATTCTGTGTGTGACTC...CCTGCCCCTACGGGCGCTGCAGCCTCCCTTCCATGCCCCAGGATCACTCTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp AGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAACCAGTGTGAAGCGTAGGGGCAGGGGCTaGGCACTTCCACCCAGAGTC +
Preference number: 4 (lower is better)
Translates to: SGQCRGPSATLAWQTSVKRRGRG*ALPPRV
Trigger: GACTCTGGGTGGAAGTGCCCAGCCCCTGCCCCTACG...CTTCACACTGGTTTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp TGGGAGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGCATCAGCTGGGTAGGTaGGGAGCGGGAAGAATCCTG +
Preference number: 4 (lower is better)
Translates to: WESAVQRPVQGAISNIGLHQLGR*GAGRIL
Trigger: CAGGATTCTTCCCGCTCCCCACCTACCCAGCTGATG...CAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCTCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR TCA 90 bp GCAGAGAGTGATCCTGGGGCATGGAAGGGAGGCTGCAGCGCCCGTAGGGGCAGGGGTTCCCATCAGCCTTaGAGCAGTCCTGTAGAGATC +
Preference number: 4 (lower is better)
Translates to: AESDPGAWKGGCSARRGRGSHQP*SSPVEI
Trigger: GATCTCTACAGGACTGCTTCAAGGCTGATGGGAACC...CCTGCCCCTACGGGCGCTGCAGCCTCCCTTCCATGCCCCAGGATCACTCTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000311565.4
CDS-3UTR TCA 90 bp GTGGGTGGCCTCAGCATCGGAGGGGCAATGACAGTCTTGGGGAGGCATCTGGCTTCTTGGCGAACTCAGTaGGCTCCCGCACGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: VGGLSIGGAMTVLGRHLASWRTQ*APARSP
Trigger: TGGAGACCGTGCGGGAGCTCACTGAGTTCGCCAAGA...AGCCAGATGCCTCCCCAAGACTGTCATTGCCCCTCCGATGCTGAGGCCACCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR TCA 90 bp GTGGGTGGCCTCAGCATCGGAGGGGCAATGACAGTCTTGGGGAGGCATCTGGCTGCAGGAACTCACGGGTaGCAAAGCCACTGCCGTTGG +
Preference number: 4 (lower is better)
Translates to: VGGLSIGGAMTVLGRHLAAGTHG*QSHCRW
Trigger: CCAACGGCAGTGGCTTTGTCACCCGTGAGTTCCTGC...AGCCAGATGCCTCCCCAAGACTGTCATTGCCCCTCCGATGCTGAGGCCACCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR TCA 90 bp GTGGGTGGCCTCAGCATCGGAGGGGCAATGACAGTCTTGGGGAGGCATCTGGCTGCATCGGAGGGGCAATaGCAGTCTTGGGGAGGCATC +
Preference number: 4 (lower is better)
Translates to: VGGLSIGGAMTVLGRHLAASEGQ*QSWGGI
Trigger: GATGCCTCCCCAAGACTGTCATTGCCCCTCCGATGC...AGCCAGATGCCTCCCCAAGACTGTCATTGCCCCTCCGATGCTGAGGCCACCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR TCA 90 bp TCAAGGGCTGGTCAATGGAAAAGTCATGTGGGTGGGCCCCTCCAGTGCTGGCCCCTTGCTCCTCTTCAGTaGGGTGGGGGCCCACCTGGA +
Preference number: 4 (lower is better)
Translates to: SRAGQWKSHVGGPLQCWPLAPLQ*GGGPPG
Trigger: TCCAGGTGGGCCCCCACCTCACTGAAGAGGAGCAAG...GGGCCAGCACTGGAGGGGCCCACCCACATGACTTTTCCATTGACCAGCCCTTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR TCA 90 bp AGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAACCAGTGTGAAGCTTGCTCCTCTTCAGTaGGGTGGGGGCCCACCTGGA +
Preference number: 4 (lower is better)
Translates to: SGQCRGPSATLAWQTSVKLAPLQ*GGGPPG
Trigger: TCCAGGTGGGCCCCCACCTCACTGAAGAGGAGCAAG...CTTCACACTGGTTTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR TCA 90 bp TCAAGGGCTGGTCAATGGAAAAGTCATGTGGGTGGGCCCCTCCAGTGCTGGCCCGCTTTGGCCCTGCTCTaGGGTGAGCGCACCTCAACC +
Preference number: 4 (lower is better)
Translates to: SRAGQWKSHVGGPLQCWPALALL*GERTST
Trigger: GGTTGAGGTGCGCTCACCTCAGAGCAGGGCCAAAGC...GGGCCAGCACTGGAGGGGCCCACCCACATGACTTTTCCATTGACCAGCCCTTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR TCA 90 bp CCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAACCAGTCAGGAAGCCTGGGCTTaGACCCCAGTTCTCCTACCT +
Preference number: 4 (lower is better)
Translates to: PSSGQCRGPSATLAWQTSQEAWA*TPVLLP
Trigger: AGGTAGGAGAACTGGGGTTCAAGCCCAGGCTTCCTG...ACTGGTTTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp AACCCCCATCAGCTGGGTAGGTGGGGAGCGGGAAGAATCCTGCCAGCAGAGAGTCCTCGGCGCCACACCTaGAGGCCCAGTCATAGCTCT +
Preference number: 4 (lower is better)
Translates to: NPHQLGRWGAGRILPAESPRRHT*RPSHSS
Trigger: AGAGCTATGACTGGGCCTGCAGGTGTGGCGCCGAGG...ACTCTCTGCTGGCAGGATTCTTCCCGCTCCCCACCTACCCAGCTGATGGGGGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
CDS-3UTR GCA 90 bp GGGCCCACCTGGAGGGAACCCTGCCTACTTCCAAGCTGGGAGAGTGCCGTCCAGGCTGCTGGAAGGAAGTaGATGCTGTGGTCCCCCATT +
Preference number: 4 (lower is better)
Translates to: GPTWREPCLLPSWESAVQAAGRK*MLWSPI
Trigger: AATGGGGGACCACAGCATGCACTTCCTTCCAGCAGC...CTGGACGGCACTCTCCCAGCTTGGAAGTAGGCAGGGTTCCCTCCAGGTGGGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
CDS-3UTR GCA 90 bp CTACTTCCAAGCTGGGAGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCGTTTGCAGTCAGCCCTaGCACCAGCTTCCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: LLPSWESAVQRPVQGAISVCSQP*HQLPLL
Trigger: GAGAAGAGGAAGCTGGTGGCAGGGCTGACTGCAAAC...GCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCTCCCAGCTTGGAAGTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp GGGCCCACCTGGAGGGAACCCTGCCTACTTCCAAGCTGGGAGAGTGCCGTCCAGAGGCCATTCACCAACTaGTTCCACACCAGCCCCTTC +
Preference number: 4 (lower is better)
Translates to: GPTWREPCLLPSWESAVQRPFTN*FHTSPF
Trigger: GAAGGGGCTGGTGTGGAAGCAGTTGGTGAATGGCCT...CTGGACGGCACTCTCCCAGCTTGGAAGTAGGCAGGGTTCCCTCCAGGTGGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp CTACTTCCAAGCTGGGAGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAGGCCATTCACCAACTaGTTCCACACCAGCCCCTTC +
Preference number: 4 (lower is better)
Translates to: LLPSWESAVQRPVQGAISRPFTN*FHTSPF
Trigger: GAAGGGGCTGGTGTGGAAGCAGTTGGTGAATGGCCT...GCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCTCCCAGCTTGGAAGTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp TGGGAGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGAGGCCATTCACCAACTaGTTCCACACCAGCCCCTTC +
Preference number: 4 (lower is better)
Translates to: WESAVQRPVQGAISNIGLRPFTN*FHTSPF
Trigger: GAAGGGGCTGGTGTGGAAGCAGTTGGTGAATGGCCT...CAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCTCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp GAGGGAACCCTGCCTACTTCCAAGCTGGGAGAGTGCCGTCCAGCGGCCAGTGCACGGTCTCCACTGTGGTaGACTGGCAGCGGTAGAAGA +
Preference number: 4 (lower is better)
Translates to: EGTLPTSKLGECRPAASARSPLW*TGSGRR
Trigger: TCTTCTACCGCTGCCAGTGCACCACAGTGGAGACCG...TGCACTGGCCGCTGGACGGCACTCTCCCAGCTTGGAAGTAGGCAGGGTTCCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp CCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAACCAGTTCAGGGTGGTTGGCCTaGAGGTGGAATTCGAGGGCA +
Preference number: 4 (lower is better)
Translates to: PSSGQCRGPSATLAWQTSSGWLA*RWNSRA
Trigger: TGCCCTCGAATTCCACCTGCAGGCCAACCACCCTGA...ACTGGTTTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp AGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAATCAGGGTGGTTGGCCTaGAGGTGGAATTCGAGGGCA +
Preference number: 4 (lower is better)
Translates to: RVPSSGQCRGPSATLAWQSGWLA*RWNSRA
Trigger: TGCCCTCGAATTCCACCTGCAGGCCAACCACCCTGA...TTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp AGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAATGCTCGGTGACCAGTTaGCGCAGGTCAGCCATCTTC +
Preference number: 4 (lower is better)
Translates to: RVPSSGQCRGPSATLAWQCSVTS*RRSAIF
Trigger: GAAGATGGCTGACCTGCGGCAACTGGTCACCGAGCA...TTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp CCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAACCAGTTGCTCGGTGACCAGTTaGCGCAGGTCAGCCATCTTC +
Preference number: 4 (lower is better)
Translates to: PSSGQCRGPSATLAWQTSCSVTS*RRSAIF
Trigger: GAAGATGGCTGACCTGCGGCAACTGGTCACCGAGCA...ACTGGTTTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp GGGCCCACCTGGAGGGAACCCTGCCTACTTCCAAGCTGGGAGAGTGCCGTCCAGGTCTTCTTGATCCGCTaGATCATCTGGGCGTGCTCG +
Preference number: 4 (lower is better)
Translates to: GPTWREPCLLPSWESAVQVFLIR*IIWACS
Trigger: CGAGCACGCCCAGATGATGCAGCGGATCAAGAAGAC...CTGGACGGCACTCTCCCAGCTTGGAAGTAGGCAGGGTTCCCTCCAGGTGGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp CGTGGGACTCTGCTGCTCCAGGCCGGGTGCTCAAGGGCTGGTCAATGGAAAAGTCTGCTCCAGGCCGGGTaGTCAAGGGCTGGTCAATGG +
Preference number: 4 (lower is better)
Translates to: RGTLLLQAGCSRAGQWKSLLQAG*SRAGQW
Trigger: CCATTGACCAGCCCTTGAGCACCCGGCCTGGAGCAG...ACTTTTCCATTGACCAGCCCTTGAGCACCCGGCCTGGAGCAGCAGAGTCCCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp TGGGAGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGATGACTATAGGGGGCTaGAGTCAGTCCAGGCCATGC +
Preference number: 4 (lower is better)
Translates to: WESAVQRPVQGAISNIGLMTIGG*SQSRPC
Trigger: GCATGGCCTGGACTGACTGCAGCCCCCTATAGTCAT...CAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCTCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp CCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAACCAGTAGTGGGGCTGAGGTGTaGTGCTGGAGCAGGATCAGT +
Preference number: 4 (lower is better)
Translates to: PSSGQCRGPSATLAWQTSSGAEV*CWSRIS
Trigger: ACTGATCCTGCTCCAGCAGCACACCTCAGCCCCACT...ACTGGTTTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp TGGGAGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGGGCAGAATTGGGTGTaGTGCTTCCTCCAACCACCA +
Preference number: 4 (lower is better)
Translates to: WESAVQRPVQGAISNIGLGQNWV*CFLQPP
Trigger: TGGTGGTTGGAGGAAGCAGCACACCCAATTCTGCCC...CAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCTCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp GTGGGTGGCCTCAGCATCGGAGGGGCAATGACAGTCTTGGGGAGGCATCTGGCTCTCTGGGTTCTCACCTaGCTCAGGGAGGGAAGGGAG +
Preference number: 4 (lower is better)
Translates to: VGGLSIGGAMTVLGRHLALWVLT*LREGRE
Trigger: CTCCCTTCCCTCCCTGAGGCAGGTGAGAACCCAGAG...AGCCAGATGCCTCCCCAAGACTGTCATTGCCCCTCCGATGCTGAGGCCACCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp GTGGGTGGCCTCAGCATCGGAGGGGCAATGACAGTCTTGGGGAGGCATCTGGCTCGCTCAGACATGGCATaGCCAGCTGTGCTTTGGCCC +
Preference number: 4 (lower is better)
Translates to: VGGLSIGGAMTVLGRHLARSDMA*PAVLWP
Trigger: GGGCCAAAGCACAGCTGGGCATGCCATGTCTGAGCG...AGCCAGATGCCTCCCCAAGACTGTCATTGCCCCTCCGATGCTGAGGCCACCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp CTACTTCCAAGCTGGGAGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCGTTCTCCTACCTCTGTaGTCTGAGACTCCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: LLPSWESAVQRPVQGAISVLLPL*SETPAS
Trigger: GCTGGCTGGAGTCTCAGAGCACAGAGGTAGGAGAAC...GCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCTCCCAGCTTGGAAGTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp TCAAGGGCTGGTCAATGGAAAAGTCATGTGGGTGGGCCCCTCCAGTGCTGGCCCCAGGTCGGCCACCTGTaGGTTGTACTGGCTCCCCTC +
Preference number: 4 (lower is better)
Translates to: SRAGQWKSHVGGPLQCWPQVGHL*VVLAPL
Trigger: GAGGGGAGCCAGTACAACCCACAGGTGGCCGACCTG...GGGCCAGCACTGGAGGGGCCCACCCACATGACTTTTCCATTGACCAGCCCTTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp TCAAGGGCTGGTCAATGGAAAAGTCATGTGGGTGGGCCCCTCCAGTGCTGGCCCACAAAGGGCGCCGTGTaGCTGGCTTTGCCGGTGAGG +
Preference number: 4 (lower is better)
Translates to: SRAGQWKSHVGGPLQCWPTKGAV*LALPVR
Trigger: CCTCACCGGCAAAGCCAGCCACACGGCGCCCTTTGT...GGGCCAGCACTGGAGGGGCCCACCCACATGACTTTTCCATTGACCAGCCCTTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp CGTGGGACTCTGCTGCTCCAGGCCGGGTGCTCAAGGGCTGGTCAATGGAAAAGTACAAAGGGCGCCGTGTaGCTGGCTTTGCCGGTGAGG +
Preference number: 4 (lower is better)
Translates to: RGTLLLQAGCSRAGQWKSTKGAV*LALPVR
Trigger: CCTCACCGGCAAAGCCAGCCACACGGCGCCCTTTGT...ACTTTTCCATTGACCAGCCCTTGAGCACCCGGCCTGGAGCAGCAGAGTCCCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp GCAGAGAGTGATCCTGGGGCATGGAAGGGAGGCTGCAGCGCCCGTAGGGGCAGGAATGTCTCGATGTCGTaGATCACAAAGGGCGCCGTG +
Preference number: 4 (lower is better)
Translates to: AESDPGAWKGGCSARRGRNVSMS*ITKGAV
Trigger: CACGGCGCCCTTTGTGATCCACGACATCGAGACATT...CCTGCCCCTACGGGCGCTGCAGCCTCCCTTCCATGCCCCAGGATCACTCTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp GTGGGTGGCCTCAGCATCGGAGGGGCAATGACAGTCTTGGGGAGGCATCTGGCTCAAAGCCACTGCCGTTaGCTACCAGCAGCCCGTCCT +
Preference number: 4 (lower is better)
Translates to: VGGLSIGGAMTVLGRHLAQSHCR*LPAARP
Trigger: AGGACGGGCTGCTGGTAGCCAACGGCAGTGGCTTTG...AGCCAGATGCCTCCCCAAGACTGTCATTGCCCCTCCGATGCTGAGGCCACCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp CCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAACCAGTGATAGCCTCCACCCGTaGAACGTTCATGAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: PSSGQCRGPSATLAWQTSDSLHP*NVHEAW
Trigger: CCAGGCCTCATGAACGTTCCACGGGTGGAGGCTATC...ACTGGTTTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp GAGGGAACCCTGCCTACTTCCAAGCTGGGAGAGTGCCGTCCAGCGGCCAGTGCATTGGGGAAGAGGTACTaGGCATCAGGGTGGTTGGCC +
Preference number: 4 (lower is better)
Translates to: EGTLPTSKLGECRPAASALGKRY*ASGWLA
Trigger: GGCCAACCACCCTGATGCCCAGTACCTCTTCCCCAA...TGCACTGGCCGCTGGACGGCACTCTCCCAGCTTGGAAGTAGGCAGGGTTCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp TCAAGGGCTGGTCAATGGAAAAGTCATGTGGGTGGGCCCCTCCAGTGCTGGCCCAGTTGGGTCAGTGGGTaGCCTCAGCATCGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: SRAGQWKSHVGGPLQCWPSWVSG*PQHRRG
Trigger: GCCCCTCCGATGCTGAGGCCACCCACTGACCCAACT...GGGCCAGCACTGGAGGGGCCCACCCACATGACTTTTCCATTGACCAGCCCTTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp AGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAACCAGTGTGAAGAGTTGGGTCAGTGGGTaGCCTCAGCATCGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: SGQCRGPSATLAWQTSVKSWVSG*PQHRRG
Trigger: GCCCCTCCGATGCTGAGGCCACCCACTGACCCAACT...CTTCACACTGGTTTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp CGTGGGACTCTGCTGCTCCAGGCCGGGTGCTCAAGGGCTGGTCAATGGAAAAGTAGTTGGGTCAGTGGGTaGCCTCAGCATCGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: RGTLLLQAGCSRAGQWKSSWVSG*PQHRRG
Trigger: GCCCCTCCGATGCTGAGGCCACCCACTGACCCAACT...ACTTTTCCATTGACCAGCCCTTGAGCACCCGGCCTGGAGCAGCAGAGTCCCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp CCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAACCAGTGATCAGTTGGGTCAGTaGGTGGCCTCAGCATCGGAG +
Preference number: 4 (lower is better)
Translates to: PSSGQCRGPSATLAWQTSDQLGQ*VASASE
Trigger: CTCCGATGCTGAGGCCACCCACTGACCCAACTGATC...ACTGGTTTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp CCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAACCAGTGCTGAGGTGTGCTGCTaGAGCAGGATCAGTTGGGTC +
Preference number: 4 (lower is better)
Translates to: PSSGQCRGPSATLAWQTSAEVCC*SRISWV
Trigger: GACCCAACTGATCCTGCTCCAGCAGCACACCTCAGC...ACTGGTTTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp TGGGAGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGAAGATGGAAGGACACTaGGTGTCAGTGGGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: WESAVQRPVQGAISNIGLKMEGH*VSVGLR
Trigger: CCTCAGCCCCACTGACACCCAGTGTCCTTCCATCTT...CAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCTCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp TCAAGGGCTGGTCAATGGAAAAGTCATGTGGGTGGGCCCCTCCAGTGCTGGCCCAGGTGGGGGCCCACCTaGAGGGAACCCTGCCTACTT +
Preference number: 4 (lower is better)
Translates to: SRAGQWKSHVGGPLQCWPRWGPT*REPCLL
Trigger: AAGTAGGCAGGGTTCCCTCCAGGTGGGCCCCCACCT...GGGCCAGCACTGGAGGGGCCCACCCACATGACTTTTCCATTGACCAGCCCTTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp CGTGGGACTCTGCTGCTCCAGGCCGGGTGCTCAAGGGCTGGTCAATGGAAAAGTAGGTGGGGGCCCACCTaGAGGGAACCCTGCCTACTT +
Preference number: 4 (lower is better)
Translates to: RGTLLLQAGCSRAGQWKSRWGPT*REPCLL
Trigger: AAGTAGGCAGGGTTCCCTCCAGGTGGGCCCCCACCT...ACTTTTCCATTGACCAGCCCTTGAGCACCCGGCCTGGAGCAGCAGAGTCCCACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp GTGGGTGGCCTCAGCATCGGAGGGGCAATGACAGTCTTGGGGAGGCATCTGGCTTCCTCTTCAGTGAGGTaGGGGCCCACCTGGAGGGAA +
Preference number: 4 (lower is better)
Translates to: VGGLSIGGAMTVLGRHLASSSVR*GPTWRE
Trigger: TTCCCTCCAGGTGGGCCCCCACCTCACTGAAGAGGA...AGCCAGATGCCTCCCCAAGACTGTCATTGCCCCTCCGATGCTGAGGCCACCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp CGTGGGACTCTGCTGCTCCAGGCCGGGTGCTCAAGGGCTGGTCAATGGAAAAGTCAGCTTCAGGGGGAGTaGGGCCTGAACTCCCGTGGA +
Preference number: 4 (lower is better)
Translates to: RGTLLLQAGCSRAGQWKSQLQGE*GLNSRG
Trigger: TCCACGGGAGTTCAGGCCCCACTCCCCCTGAAGCTG...ACTTTTCCATTGACCAGCCCTTGAGCACCCGGCCTGGAGCAGCAGAGTCCCACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp TCAAGGGCTGGTCAATGGAAAAGTCATGTGGGTGGGCCCCTCCAGTGCTGGCCCCAGCTTCAGGGGGAGTaGGGCCTGAACTCCCGTGGA +
Preference number: 4 (lower is better)
Translates to: SRAGQWKSHVGGPLQCWPQLQGE*GLNSRG
Trigger: TCCACGGGAGTTCAGGCCCCACTCCCCCTGAAGCTG...GGGCCAGCACTGGAGGGGCCCACCCACATGACTTTTCCATTGACCAGCCCTTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp AGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAACTTATGTGTGTGTGCTaGAGGGGCAGCTTCAGGGGG +
Preference number: 4 (lower is better)
Translates to: RVPSSGQCRGPSATLAWQLMCVC*RGSFRG
Trigger: CCCCCTGAAGCTGCCCCTCCAGCACACACACATAAG...TTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp GAGGGAACCCTGCCTACTTCCAAGCTGGGAGAGTGCCGTCCAGCGGCCAGTGCATGCGCCGCTCAGACATaGCATGCCCAGCTGTGCTTT +
Preference number: 4 (lower is better)
Translates to: EGTLPTSKLGECRPAASACAAQT*HAQLCF
Trigger: AAAGCACAGCTGGGCATGCCATGTCTGAGCGGCGCA...TGCACTGGCCGCTGGACGGCACTCTCCCAGCTTGGAAGTAGGCAGGGTTCCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp CTACTTCCAAGCTGGGAGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCGAGTCACACACAGAATaGCTCCTTGGGAGGGAGGAC +
Preference number: 4 (lower is better)
Translates to: LLPSWESAVQRPVQGAISESHTE*LLGRED
Trigger: GTCCTCCCTCCCAAGGAGCCATTCTGTGTGTGACTC...GCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCTCCCAGCTTGGAAGTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp GGGCCCACCTGGAGGGAACCCTGCCTACTTCCAAGCTGGGAGAGTGCCGTCCAGGAGTCACACACAGAATaGCTCCTTGGGAGGGAGGAC +
Preference number: 4 (lower is better)
Translates to: GPTWREPCLLPSWESAVQESHTE*LLGRED
Trigger: GTCCTCCCTCCCAAGGAGCCATTCTGTGTGTGACTC...CTGGACGGCACTCTCCCAGCTTGGAAGTAGGCAGGGTTCCCTCCAGGTGGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp TCAAGGGCTGGTCAATGGAAAAGTCATGTGGGTGGGCCCCTCCAGTGCTGGCCCAGTGATCCTGGGGCATaGAAGGGAGGCTGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: SRAGQWKSHVGGPLQCWPSDPGA*KGGCSA
Trigger: GGCGCTGCAGCCTCCCTTCCATGCCCCAGGATCACT...GGGCCAGCACTGGAGGGGCCCACCCACATGACTTTTCCATTGACCAGCCCTTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp CGTGGGACTCTGCTGCTCCAGGCCGGGTGCTCAAGGGCTGGTCAATGGAAAAGTAGTGATCCTGGGGCATaGAAGGGAGGCTGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: RGTLLLQAGCSRAGQWKSSDPGA*KGGCSA
Trigger: GGCGCTGCAGCCTCCCTTCCATGCCCCAGGATCACT...ACTTTTCCATTGACCAGCCCTTGAGCACCCGGCCTGGAGCAGCAGAGTCCCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp GAGGGAACCCTGCCTACTTCCAAGCTGGGAGAGTGCCGTCCAGCGGCCAGTGCACATCAGCTGGGTAGGTaGGGAGCGGGAAGAATCCTG +
Preference number: 4 (lower is better)
Translates to: EGTLPTSKLGECRPAASAHQLGR*GAGRIL
Trigger: CAGGATTCTTCCCGCTCCCCACCTACCCAGCTGATG...TGCACTGGCCGCTGGACGGCACTCTCCCAGCTTGGAAGTAGGCAGGGTTCCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp TCAAGGGCTGGTCAATGGAAAAGTCATGTGGGTGGGCCCCTCCAGTGCTGGCCCCCAACCCCCATCAGCTaGGTAGGTGGGGAGCGGGAA +
Preference number: 4 (lower is better)
Translates to: SRAGQWKSHVGGPLQCWPPTPIS*VGGERE
Trigger: TTCCCGCTCCCCACCTACCCAGCTGATGGGGGTTGG...GGGCCAGCACTGGAGGGGCCCACCCACATGACTTTTCCATTGACCAGCCCTTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp GCAGAGAGTGATCCTGGGGCATGGAAGGGAGGCTGCAGCGCCCGTAGGGGCAGGCGGGAGAGGTCTCGTTaGTGCATCTGTCTTCATCTG +
Preference number: 4 (lower is better)
Translates to: AESDPGAWKGGCSARRGRRERSR*CICLHL
Trigger: CAGATGAAGACAGATGCACCAACGAGACCTCTCCCG...CCTGCCCCTACGGGCGCTGCAGCCTCCCTTCCATGCCCCAGGATCACTCTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448077.6
CDS-3UTR TCA 90 bp CCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAACCAGTGCAGAAGCCACTGTGTaGGTATCACGTGCATGCCCA +
Preference number: 4 (lower is better)
Translates to: PSSGQCRGPSATLAWQTSAEATV*VSRACP
Trigger: TGGGCATGCACGTGATACTCACACAGTGGCTTCTGC...ACTGGTTTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR TCA 90 bp GTGGGTGGCCTCAGCATCGGAGGGGCAATGACAGTCTTGGGGAGGCATCTGGCTGGCATCGTCTGGGTCTaGACGCAGATGGACCTCTAC +
Preference number: 4 (lower is better)
Translates to: VGGLSIGGAMTVLGRHLAGIVWV*TQMDLY
Trigger: GTAGAGGTCCATCTGCGTTCAGACCCAGACGATGCC...AGCCAGATGCCTCCCCAAGACTGTCATTGCCCCTCCGATGCTGAGGCCACCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
CDS-3UTR TCA 90 bp CGTGGGACTCTGCTGCTCCAGGCCGGGTGCTCAAGGGCTGGTCAATGGAAAAGTTCTTGGCGAACTCAGTaGGCTCCCGCACGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: RGTLLLQAGCSRAGQWKSSWRTQ*APARSP
Trigger: TGGAGACCGTGCGGGAGCTCACTGAGTTCGCCAAGA...ACTTTTCCATTGACCAGCCCTTGAGCACCCGGCCTGGAGCAGCAGAGTCCCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR TCA 90 bp TCAAGGGCTGGTCAATGGAAAAGTCATGTGGGTGGGCCCCTCCAGTGCTGGCCCTCTTGGCGAACTCAGTaGGCTCCCGCACGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: SRAGQWKSHVGGPLQCWPSWRTQ*APARSP
Trigger: TGGAGACCGTGCGGGAGCTCACTGAGTTCGCCAAGA...GGGCCAGCACTGGAGGGGCCCACCCACATGACTTTTCCATTGACCAGCCCTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR TCA 90 bp GTGGGTGGCCTCAGCATCGGAGGGGCAATGACAGTCTTGGGGAGGCATCTGGCTTGGGTGTCATGTGTCTaGGGGCGATCGTGGGACTCT +
Preference number: 4 (lower is better)
Translates to: VGGLSIGGAMTVLGRHLAWVSCV*GRSWDS
Trigger: AGAGTCCCACGATCGCCCTCAGACACATGACACCCA...AGCCAGATGCCTCCCCAAGACTGTCATTGCCCCTCCGATGCTGAGGCCACCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR TCA 90 bp CGTGGGACTCTGCTGCTCCAGGCCGGGTGCTCAAGGGCTGGTCAATGGAAAAGTGCATCGGAGGGGCAATaGCAGTCTTGGGGAGGCATC +
Preference number: 4 (lower is better)
Translates to: RGTLLLQAGCSRAGQWKSASEGQ*QSWGGI
Trigger: GATGCCTCCCCAAGACTGTCATTGCCCCTCCGATGC...ACTTTTCCATTGACCAGCCCTTGAGCACCCGGCCTGGAGCAGCAGAGTCCCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR TCA 90 bp CCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAACCAGTCCTGGCAAACCAGTGTaGAGATGGAAGGACACTGGG +
Preference number: 4 (lower is better)
Translates to: PSSGQCRGPSATLAWQTSPGKPV*RWKDTG
Trigger: CCCAGTGTCCTTCCATCTTCACACTGGTTTGCCAGG...ACTGGTTTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR TCA 90 bp AGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAATTCATAGCCTTGGCCTaGAAGGAAGCACCCCAACCC +
Preference number: 4 (lower is better)
Translates to: RVPSSGQCRGPSATLAWQFIALA*KEAPQP
Trigger: GGGTTGGGGTGCTTCCTTTCAGGCCAAGGCTATGAA...TTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR TCA 90 bp CATGTTCCACTGCCAAGATCACAGGGACACTTCCCCACACTGTCAGAGCTCAGGCACAGTGCCCTGCAGTaGGGGCCAACCCCCAGGACG +
Preference number: 4 (lower is better)
Translates to: HVPLPRSQGHFPTLSELRHSALQ*GPTPRT
Trigger: CGTCCTGGGGGTTGGCCCTCACTGCAGGGCACTGTG...CCTGAGCTCTGACAGTGTGGGGAAGTGTCCCTGTGATCTTGGCAGTGGAACATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000337400.6
CDS-3UTR GCA 90 bp CGTGGGACTCTGCTGCTCCAGGCCGGGTGCTCAAGGGCTGGTCAATGGAAAAGTGCTTCCTCCTGTGGCTaGTCCATGGCTGATCTCCCC +
Preference number: 4 (lower is better)
Translates to: RGTLLLQAGCSRAGQWKSASSCG*SMADLP
Trigger: GGGGAGATCAGCCATGGAGCAGCCACAGGAGGAAGC...ACTTTTCCATTGACCAGCCCTTGAGCACCCGGCCTGGAGCAGCAGAGTCCCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
CDS-3UTR GCA 90 bp AGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAACTCTGGGGCTCCTTCTaGCTCTGCCACTTCCTCTTT +
Preference number: 4 (lower is better)
Translates to: RVPSSGQCRGPSATLAWQLWGSF*LCHFLF
Trigger: AAAGAGGAAGTGGCAGAGGCAGAAGGAGCCCCAGAG...TTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
CDS-3UTR GCA 90 bp CTACTTCCAAGCTGGGAGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCGACGGAAGAAGCCCTTaGACCCCTCACATGCATGAA +
Preference number: 4 (lower is better)
Translates to: LLPSWESAVQRPVQGAISDGRSP*TPHMHE
Trigger: TTCATGCATGTGAGGGGTGCAAGGGCTTCTTCCGTC...GCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCTCCCAGCTTGGAAGTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000448077.6
CDS-3UTR GCA 90 bp TGGGAGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGACGGAAGAAGCCCTTaGACCCCTCACATGCATGAA +
Preference number: 4 (lower is better)
Translates to: WESAVQRPVQGAISNIGLDGRSP*TPHMHE
Trigger: TTCATGCATGTGAGGGGTGCAAGGGCTTCTTCCGTC...CAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCTCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000448077.6
CDS-3UTR GCA 90 bp GAGGGCCAACCCCCAGGACGACTGGGTGTGCCAGGCCAGCCCACCTGCCCCACTTCTTCTTCTGAATCTTaGAGCTGCGCTCACACTTCT +
Preference number: 4 (lower is better)
Translates to: EGQPPGRLGVPGQPTCPTSSSES*SCAHTS
Trigger: AGAAGTGTGAGCGCAGCTGCAAGATTCAGAAGAAGA...AGTGGGGCAGGTGGGCTGGCCTGGCACACCCAGTCGTCCTGGGGGTTGGCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337400.6
CDS-3UTR GCA 90 bp CCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAACCAGTGTTTGCAGTCAGCCCTaGCACCAGCTTCCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: PSSGQCRGPSATLAWQTSVCSQP*HQLPLL
Trigger: GAGAAGAGGAAGCTGGTGGCAGGGCTGACTGCAAAC...ACTGGTTTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp GTGGGTGGCCTCAGCATCGGAGGGGCAATGACAGTCTTGGGGAGGCATCTGGCTCGGTCTCCACTGTGGTaGACTGGCAGCGGTAGAAGA +
Preference number: 4 (lower is better)
Translates to: VGGLSIGGAMTVLGRHLARSPLW*TGSGRR
Trigger: TCTTCTACCGCTGCCAGTGCACCACAGTGGAGACCG...AGCCAGATGCCTCCCCAAGACTGTCATTGCCCCTCCGATGCTGAGGCCACCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp GAGGGAACCCTGCCTACTTCCAAGCTGGGAGAGTGCCGTCCAGCGGCCAGTGCAGCGAAGATGGCCTCGTaGACGCCATACTTGAGAAGG +
Preference number: 4 (lower is better)
Translates to: EGTLPTSKLGECRPAASAAKMAS*TPYLRR
Trigger: CCTTCTCAAGTATGGCGTGCACGAGGCCATCTTCGC...TGCACTGGCCGCTGGACGGCACTCTCCCAGCTTGGAAGTAGGCAGGGTTCCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp GTGGGTGGCCTCAGCATCGGAGGGGCAATGACAGTCTTGGGGAGGCATCTGGCTTCAGGGTGGTTGGCCTaGAGGTGGAATTCGAGGGCA +
Preference number: 4 (lower is better)
Translates to: VGGLSIGGAMTVLGRHLASGWLA*RWNSRA
Trigger: TGCCCTCGAATTCCACCTGCAGGCCAACCACCCTGA...AGCCAGATGCCTCCCCAAGACTGTCATTGCCCCTCCGATGCTGAGGCCACCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp AACCCCCATCAGCTGGGTAGGTGGGGAGCGGGAAGAATCCTGCCAGCAGAGAGTTGCATCATCTGGGCGTaGTCGGTGACCAGTTGCCGC +
Preference number: 4 (lower is better)
Translates to: NPHQLGRWGAGRILPAESCIIWA*SVTSCR
Trigger: GCGGCAACTGGTCACCGAGCACGCCCAGATGATGCA...ACTCTCTGCTGGCAGGATTCTTCCCGCTCCCCACCTACCCAGCTGATGGGGGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp AGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAGTCTTCTTGATCCGCTaGATCATCTGGGCGTGCTCG +
Preference number: 4 (lower is better)
Translates to: RVPSSGQCRGPSATLAWQVFLIR*IIWACS
Trigger: CGAGCACGCCCAGATGATGCAGCGGATCAAGAAGAC...TTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp CCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAACCAGTGTCTTCTTGATCCGCTaGATCATCTGGGCGTGCTCG +
Preference number: 4 (lower is better)
Translates to: PSSGQCRGPSATLAWQTSVFLIR*IIWACS
Trigger: CGAGCACGCCCAGATGATGCAGCGGATCAAGAAGAC...ACTGGTTTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp AACCCCCATCAGCTGGGTAGGTGGGGAGCGGGAAGAATCCTGCCAGCAGAGAGTTCCTGGAGCAGAGGGTaGAGCGAGGTCTCGGTTTCG +
Preference number: 4 (lower is better)
Translates to: NPHQLGRWGAGRILPAESSWSRG*SEVSVS
Trigger: CGAAACCGAGACCTCGCTGCACCCTCTGCTCCAGGA...ACTCTCTGCTGGCAGGATTCTTCCCGCTCCCCACCTACCCAGCTGATGGGGGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp AACCCCCATCAGCTGGGTAGGTGGGGAGCGGGAAGAATCCTGCCAGCAGAGAGTATCGTGGGACTCTGCTaGTCCAGGCCGGGTGCTCAA +
Preference number: 4 (lower is better)
Translates to: NPHQLGRWGAGRILPAESIVGLC*SRPGAQ
Trigger: TTGAGCACCCGGCCTGGAGCAGCAGAGTCCCACGAT...ACTCTCTGCTGGCAGGATTCTTCCCGCTCCCCACCTACCCAGCTGATGGGGGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp TCAAGGGCTGGTCAATGGAAAAGTCATGTGGGTGGGCCCCTCCAGTGCTGGCCCATCGTGGGACTCTGCTaGTCCAGGCCGGGTGCTCAA +
Preference number: 4 (lower is better)
Translates to: SRAGQWKSHVGGPLQCWPIVGLC*SRPGAQ
Trigger: TTGAGCACCCGGCCTGGAGCAGCAGAGTCCCACGAT...GGGCCAGCACTGGAGGGGCCCACCCACATGACTTTTCCATTGACCAGCCCTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp GAGGGAACCCTGCCTACTTCCAAGCTGGGAGAGTGCCGTCCAGCGGCCAGTGCAAGTCAGTCCAGGCCATaGTTAGCCTTCCCTGGAACC +
Preference number: 4 (lower is better)
Translates to: EGTLPTSKLGECRPAASASQSRP*LAFPGT
Trigger: GGTTCCAGGGAAGGCTAAGCATGGCCTGGACTGACT...TGCACTGGCCGCTGGACGGCACTCTCCCAGCTTGGAAGTAGGCAGGGTTCCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp GCAGAGAGTGATCCTGGGGCATGGAAGGGAGGCTGCAGCGCCCGTAGGGGCAGGCCTTCTCTTGAGACTTaGTCCTCTTCAGTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: AESDPGAWKGGCSARRGRPSLET*SSSVRW
Trigger: CCACCTCACTGAAGAGGAGCAAGTCTCAAGAGAAGG...CCTGCCCCTACGGGCGCTGCAGCCTCCCTTCCATGCCCCAGGATCACTCTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp AGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAGGGCAGAATTGGGTGTaGTGCTTCCTCCAACCACCA +
Preference number: 4 (lower is better)
Translates to: RVPSSGQCRGPSATLAWQGQNWV*CFLQPP
Trigger: TGGTGGTTGGAGGAAGCAGCACACCCAATTCTGCCC...TTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp CCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAACCAGTGGGCAGAATTGGGTGTaGTGCTTCCTCCAACCACCA +
Preference number: 4 (lower is better)
Translates to: PSSGQCRGPSATLAWQTSGQNWV*CFLQPP
Trigger: TGGTGGTTGGAGGAAGCAGCACACCCAATTCTGCCC...ACTGGTTTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp CGTGGGACTCTGCTGCTCCAGGCCGGGTGCTCAAGGGCTGGTCAATGGAAAAGTGCTGTGCTTTGGCCCTaGTCTGAGGTGAGCGCACCT +
Preference number: 4 (lower is better)
Translates to: RGTLLLQAGCSRAGQWKSAVLWP*SEVSAP
Trigger: AGGTGCGCTCACCTCAGAGCAGGGCCAAAGCACAGC...ACTTTTCCATTGACCAGCCCTTGAGCACCCGGCCTGGAGCAGCAGAGTCCCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp AACCCCCATCAGCTGGGTAGGTGGGGAGCGGGAAGAATCCTGCCAGCAGAGAGTCGCTCAGACATGGCATaGCCAGCTGTGCTTTGGCCC +
Preference number: 4 (lower is better)
Translates to: NPHQLGRWGAGRILPAESRSDMA*PAVLWP
Trigger: GGGCCAAAGCACAGCTGGGCATGCCATGTCTGAGCG...ACTCTCTGCTGGCAGGATTCTTCCCGCTCCCCACCTACCCAGCTGATGGGGGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp GAGGGAACCCTGCCTACTTCCAAGCTGGGAGAGTGCCGTCCAGCGGCCAGTGCAAGGAAGTGCATGCTGTaGTCCCCCATTGAGCTCTGG +
Preference number: 4 (lower is better)
Translates to: EGTLPTSKLGECRPAASARKCML*SPIELW
Trigger: CCAGAGCTCAATGGGGGACCACAGCATGCACTTCCT...TGCACTGGCCGCTGGACGGCACTCTCCCAGCTTGGAAGTAGGCAGGGTTCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
CDS-3UTR CCA 90 bp CGTGGGACTCTGCTGCTCCAGGCCGGGTGCTCAAGGGCTGGTCAATGGAAAAGTCAGCCCATCTGCAGTTaGTCCAGCAGTGAGGGTGGC +
Preference number: 4 (lower is better)
Translates to: RGTLLLQAGCSRAGQWKSQPICS*SSSEGG
Trigger: GCCACCCTCACTGCTGGACCAACTGCAGATGGGCTG...ACTTTTCCATTGACCAGCCCTTGAGCACCCGGCCTGGAGCAGCAGAGTCCCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000448077.6
CDS-3UTR CCA 90 bp CTACTTCCAAGCTGGGAGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAATGTCTCGATGTCGTaGATCACAAAGGGCGCCGTG +
Preference number: 4 (lower is better)
Translates to: LLPSWESAVQRPVQGAISNVSMS*ITKGAV
Trigger: CACGGCGCCCTTTGTGATCCACGACATCGAGACATT...GCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCTCCCAGCTTGGAAGTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp CGTGGGACTCTGCTGCTCCAGGCCGGGTGCTCAAGGGCTGGTCAATGGAAAAGTCAAAGCCACTGCCGTTaGCTACCAGCAGCCCGTCCT +
Preference number: 4 (lower is better)
Translates to: RGTLLLQAGCSRAGQWKSQSHCR*LPAARP
Trigger: AGGACGGGCTGCTGGTAGCCAACGGCAGTGGCTTTG...ACTTTTCCATTGACCAGCCCTTGAGCACCCGGCCTGGAGCAGCAGAGTCCCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp GGGCCCACCTGGAGGGAACCCTGCCTACTTCCAAGCTGGGAGAGTGCCGTCCAGAACGTTCATGAGGCCTaGCCGGTCTCCACACAGAAT +
Preference number: 4 (lower is better)
Translates to: GPTWREPCLLPSWESAVQNVHEA*PVSTQN
Trigger: ATTCTGTGTGGAGACCGGCCAGGCCTCATGAACGTT...CTGGACGGCACTCTCCCAGCTTGGAAGTAGGCAGGGTTCCCTCCAGGTGGGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp TCAAGGGCTGGTCAATGGAAAAGTCATGTGGGTGGGCCCCTCCAGTGCTGGCCCTGGTTGGCCTGCAGGTaGAATTCGAGGGCACGCAGG +
Preference number: 4 (lower is better)
Translates to: SRAGQWKSHVGGPLQCWPWLACR*NSRARR
Trigger: CCTGCGTGCCCTCGAATTCCACCTGCAGGCCAACCA...GGGCCAGCACTGGAGGGGCCCACCCACATGACTTTTCCATTGACCAGCCCTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp AGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAATACTGGGCATCAGGGTaGTTGGCCTGCAGGTGGAAT +
Preference number: 4 (lower is better)
Translates to: RVPSSGQCRGPSATLAWQYWASG*LACRWN
Trigger: ATTCCACCTGCAGGCCAACCACCCTGATGCCCAGTA...TTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp GGGCCCACCTGGAGGGAACCCTGCCTACTTCCAAGCTGGGAGAGTGCCGTCCAGTCTTCTGCAGCAGCTTaGGGAAGAGGTACTGGGCAT +
Preference number: 4 (lower is better)
Translates to: GPTWREPCLLPSWESAVQSSAAA*GRGTGH
Trigger: ATGCCCAGTACCTCTTCCCCAAGCTGCTGCAGAAGA...CTGGACGGCACTCTCCCAGCTTGGAAGTAGGCAGGGTTCCCTCCAGGTGGGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp GTGGGTGGCCTCAGCATCGGAGGGGCAATGACAGTCTTGGGGAGGCATCTGGCTATCCGCTGCATCATCTaGGCGTGCTCGGTGACCAGT +
Preference number: 4 (lower is better)
Translates to: VGGLSIGGAMTVLGRHLAIRCII*ACSVTS
Trigger: ACTGGTCACCGAGCACGCCCAGATGATGCAGCGGAT...AGCCAGATGCCTCCCCAAGACTGTCATTGCCCCTCCGATGCTGAGGCCACCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp AACCCCCATCAGCTGGGTAGGTGGGGAGCGGGAAGAATCCTGCCAGCAGAGAGTGTCTGCAGGGAGGCCTaGGTGCCGCCGTTAGTACAT +
Preference number: 4 (lower is better)
Translates to: NPHQLGRWGAGRILPAESVCREA*VPPLVH
Trigger: ATGTACTAACGGCGGCACCCAGGCCTCCCTGCAGAC...ACTCTCTGCTGGCAGGATTCTTCCCGCTCCCCACCTACCCAGCTGATGGGGGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp CGTGGGACTCTGCTGCTCCAGGCCGGGTGCTCAAGGGCTGGTCAATGGAAAAGTGTCTGCAGGGAGGCCTaGGTGCCGCCGTTAGTACAT +
Preference number: 4 (lower is better)
Translates to: RGTLLLQAGCSRAGQWKSVCREA*VPPLVH
Trigger: ATGTACTAACGGCGGCACCCAGGCCTCCCTGCAGAC...ACTTTTCCATTGACCAGCCCTTGAGCACCCGGCCTGGAGCAGCAGAGTCCCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp GGGCCCACCTGGAGGGAACCCTGCCTACTTCCAAGCTGGGAGAGTGCCGTCCAGAATGGAAAAGTCATGTaGGTGGGCCCCTCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: GPTWREPCLLPSWESAVQNGKVM*VGPSSA
Trigger: AGCACTGGAGGGGCCCACCCACATGACTTTTCCATT...CTGGACGGCACTCTCCCAGCTTGGAAGTAGGCAGGGTTCCCTCCAGGTGGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp CGTGGGACTCTGCTGCTCCAGGCCGGGTGCTCAAGGGCTGGTCAATGGAAAAGTTCCTCTTCAGTGAGGTaGGGGCCCACCTGGAGGGAA +
Preference number: 4 (lower is better)
Translates to: RGTLLLQAGCSRAGQWKSSSSVR*GPTWRE
Trigger: TTCCCTCCAGGTGGGCCCCCACCTCACTGAAGAGGA...ACTTTTCCATTGACCAGCCCTTGAGCACCCGGCCTGGAGCAGCAGAGTCCCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp TCAAGGGCTGGTCAATGGAAAAGTCATGTGGGTGGGCCCCTCCAGTGCTGGCCCTCCTCTTCAGTGAGGTaGGGGCCCACCTGGAGGGAA +
Preference number: 4 (lower is better)
Translates to: SRAGQWKSHVGGPLQCWPSSSVR*GPTWRE
Trigger: TTCCCTCCAGGTGGGCCCCCACCTCACTGAAGAGGA...GGGCCAGCACTGGAGGGGCCCACCCACATGACTTTTCCATTGACCAGCCCTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp TCAAGGGCTGGTCAATGGAAAAGTCATGTGGGTGGGCCCCTCCAGTGCTGGCCCTGTGAGGCCAGGCCCTaGCCCTGGATGCTGACACAA +
Preference number: 4 (lower is better)
Translates to: SRAGQWKSHVGGPLQCWPCEARP*PWMLTQ
Trigger: TTGTGTCAGCATCCAGGGCCAGGGCCTGGCCTCACA...GGGCCAGCACTGGAGGGGCCCACCCACATGACTTTTCCATTGACCAGCCCTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp GTGGGTGGCCTCAGCATCGGAGGGGCAATGACAGTCTTGGGGAGGCATCTGGCTGGGCCTGAACTCCCGTaGAGCCAGCTAGAGAAAGGA +
Preference number: 4 (lower is better)
Translates to: VGGLSIGGAMTVLGRHLAGPELP*SQLEKG
Trigger: TCCTTTCTCTAGCTGGCTCCACGGGAGTTCAGGCCC...AGCCAGATGCCTCCCCAAGACTGTCATTGCCCCTCCGATGCTGAGGCCACCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp GTGGGTGGCCTCAGCATCGGAGGGGCAATGACAGTCTTGGGGAGGCATCTGGCTCTTATGTGTGTGTGCTaGAGGGGCAGCTTCAGGGGG +
Preference number: 4 (lower is better)
Translates to: VGGLSIGGAMTVLGRHLALMCVC*RGSFRG
Trigger: CCCCCTGAAGCTGCCCCTCCAGCACACACACATAAG...AGCCAGATGCCTCCCCAAGACTGTCATTGCCCCTCCGATGCTGAGGCCACCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp GTGGGTGGCCTCAGCATCGGAGGGGCAATGACAGTCTTGGGGAGGCATCTGGCTTGCGCCGCTCAGACATaGCATGCCCAGCTGTGCTTT +
Preference number: 4 (lower is better)
Translates to: VGGLSIGGAMTVLGRHLACAAQT*HAQLCF
Trigger: AAAGCACAGCTGGGCATGCCATGTCTGAGCGGCGCA...AGCCAGATGCCTCCCCAAGACTGTCATTGCCCCTCCGATGCTGAGGCCACCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR TCA 90 bp CCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAACCAGTTTTTCCAGGGGTATCTaGCCCTGCTTTCCAGACCAC +
Preference number: 4 (lower is better)
Translates to: PSSGQCRGPSATLAWQTSFSRGI*PCFPDH
Trigger: GTGGTCTGGAAAGCAGGGTCAGATACCCCTGGAAAA...ACTGGTTTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000311565.4
CDS-3UTR TCA 90 bp AACCCCCATCAGCTGGGTAGGTGGGGAGCGGGAAGAATCCTGCCAGCAGAGAGTGGCATCGTCTGGGTCTaGACGCAGATGGACCTCTAC +
Preference number: 4 (lower is better)
Translates to: NPHQLGRWGAGRILPAESGIVWV*TQMDLY
Trigger: GTAGAGGTCCATCTGCGTTCAGACCCAGACGATGCC...ACTCTCTGCTGGCAGGATTCTTCCCGCTCCCCACCTACCCAGCTGATGGGGGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
CDS-3UTR TCA 90 bp AGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAACCAGTGTGAAGACGGATAGCGTTGTGTaGCATGCCCAGTGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: SGQCRGPSATLAWQTSVKTDSVV*HAQCQA
Trigger: TGCCTGGCACTGGGCATGTCACACAACGCTATCCGT...CTTCACACTGGTTTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000448077.6
CDS-3UTR TCA 90 bp TCAAGGGCTGGTCAATGGAAAAGTCATGTGGGTGGGCCCCTCCAGTGCTGGCCCTGGGTGTCATGTGTCTaGGGGCGATCGTGGGACTCT +
Preference number: 4 (lower is better)
Translates to: SRAGQWKSHVGGPLQCWPWVSCV*GRSWDS
Trigger: AGAGTCCCACGATCGCCCTCAGACACATGACACCCA...GGGCCAGCACTGGAGGGGCCCACCCACATGACTTTTCCATTGACCAGCCCTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR TCA 90 bp GTGGGTGGCCTCAGCATCGGAGGGGCAATGACAGTCTTGGGGAGGCATCTGGCTGACAGGAGACAGAAGTaGGGACCTAAGCCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: VGGLSIGGAMTVLGRHLADRRQK*GPKPAG
Trigger: ACCTGCAGGCTTAGGTCCTCACTTCTGTCTCCTGTC...AGCCAGATGCCTCCCCAAGACTGTCATTGCCCCTCCGATGCTGAGGCCACCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR TCA 90 bp AGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAACCAGTGTGAAGCAGGAAGCCTGGGCTTaGACCCCAGTTCTCCTACCT +
Preference number: 4 (lower is better)
Translates to: SGQCRGPSATLAWQTSVKQEAWA*TPVLLP
Trigger: AGGTAGGAGAACTGGGGTTCAAGCCCAGGCTTCCTG...CTTCACACTGGTTTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR TCA 90 bp TCAAGGGCTGGTCAATGGAAAAGTCATGTGGGTGGGCCCCTCCAGTGCTGGCCCCAGGAAGCCTGGGCTTaGACCCCAGTTCTCCTACCT +
Preference number: 4 (lower is better)
Translates to: SRAGQWKSHVGGPLQCWPQEAWA*TPVLLP
Trigger: AGGTAGGAGAACTGGGGTTCAAGCCCAGGCTTCCTG...GGGCCAGCACTGGAGGGGCCCACCCACATGACTTTTCCATTGACCAGCCCTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp CACTGCCAAGATCACAGGGACACTTCCCCACACTGTCAGAGCTCAGGCACAGTGCCTCGGCGCCACACCTaGAGGCCCAGTCATAGCTCT +
Preference number: 4 (lower is better)
Translates to: HCQDHRDTSPHCQSSGTVPRRHT*RPSHSS
Trigger: AGAGCTATGACTGGGCCTGCAGGTGTGGCGCCGAGG...CACTGTGCCTGAGCTCTGACAGTGTGGGGAAGTGTCCCTGTGATCTTGGCAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337400.6
CDS-3UTR GCA 90 bp GGGCCCACCTGGAGGGAACCCTGCCTACTTCCAAGCTGGGAGAGTGCCGTCCAGAGAGGTCTGTGTAGCTaGTGGAAGGAAGTGCATGCT +
Preference number: 4 (lower is better)
Translates to: GPTWREPCLLPSWESAVQRGLCS*WKEVHA
Trigger: AGCATGCACTTCCTTCCAGCAGCTACACAGACCTCT...CTGGACGGCACTCTCCCAGCTTGGAAGTAGGCAGGGTTCCCTCCAGGTGGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311565.4
ENST00000360694.8
CDS-3UTR GCA 90 bp TCAAGGGCTGGTCAATGGAAAAGTCATGTGGGTGGGCCCCTCCAGTGCTGGCCCCCGTCACAGCCCATCTaGAGTTGGTCCAGCAGTGAG +
Preference number: 4 (lower is better)
Translates to: SRAGQWKSHVGGPLQCWPPSQPI*SWSSSE
Trigger: CTCACTGCTGGACCAACTGCAGATGGGCTGTGACGG...GGGCCAGCACTGGAGGGGCCCACCCACATGACTTTTCCATTGACCAGCCCTTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000448077.6
CDS-3UTR GCA 90 bp GCAGAGAGTGATCCTGGGGCATGGAAGGGAGGCTGCAGCGCCCGTAGGGGCAGGTCTGAATCTTGCAGCTaGGCTCACACTTCTCGTACT +
Preference number: 4 (lower is better)
Translates to: AESDPGAWKGGCSARRGRSESCS*AHTSRT
Trigger: AGTACGAGAAGTGTGAGCGCAGCTGCAAGATTCAGA...CCTGCCCCTACGGGCGCTGCAGCCTCCCTTCCATGCCCCAGGATCACTCTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000448077.6
CDS-3UTR GCA 90 bp GTGGGTGGCCTCAGCATCGGAGGGGCAATGACAGTCTTGGGGAGGCATCTGGCTCACCAGCCCCTTCTCTaGCTGCCACAATGTCTCGAT +
Preference number: 4 (lower is better)
Translates to: VGGLSIGGAMTVLGRHLAHQPLL*LPQCLD
Trigger: ATCGAGACATTGTGGCAGGCAGAGAAGGGGCTGGTG...AGCCAGATGCCTCCCCAAGACTGTCATTGCCCCTCCGATGCTGAGGCCACCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp AGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAACCAGTGTGAAGAGTGGGGCTGAGGTGTaGTGCTGGAGCAGGATCAGT +
Preference number: 4 (lower is better)
Translates to: SGQCRGPSATLAWQTSVKSGAEV*CWSRIS
Trigger: ACTGATCCTGCTCCAGCAGCACACCTCAGCCCCACT...CTTCACACTGGTTTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp AACCCCCATCAGCTGGGTAGGTGGGGAGCGGGAAGAATCCTGCCAGCAGAGAGTACCTGGAGGGAACCCTaGCTACTTCCAAGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: NPHQLGRWGAGRILPAESTWREP*LLPSWE
Trigger: CTCCCAGCTTGGAAGTAGGCAGGGTTCCCTCCAGGT...ACTCTCTGCTGGCAGGATTCTTCCCGCTCCCCACCTACCCAGCTGATGGGGGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp AGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAACCAGTGTGAAGACCTGGAGGGAACCCTaGCTACTTCCAAGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: SGQCRGPSATLAWQTSVKTWREP*LLPSWE
Trigger: CTCCCAGCTTGGAAGTAGGCAGGGTTCCCTCCAGGT...CTTCACACTGGTTTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp CATGCTCAGTCAGTGCCTTGCATGTTCCACTGCCAAGATCACAGGGACACTTCCCAGGACGACTGGGTGTaGCAGGCCAGCCCACCTGCC +
Preference number: 4 (lower is better)
Translates to: HAQSVPCMFHCQDHRDTSQDDWV*QASPPA
Trigger: GGCAGGTGGGCTGGCCTGGCACACCCAGTCGTCCTG...GGAAGTGTCCCTGTGATCTTGGCAGTGGAACATGCAAGGCACTGACTGAGCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337400.6
CDS-3UTR CCA 90 bp AGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAATGGAAGCGGCAGTACTaGCACTTGTTGCGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: RVPSSGQCRGPSATLAWQWKRQY*HLLRFF
Trigger: GAAGAACCGCAACAAGTGCCAGTACTGCCGCTTCCA...TTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000448077.6
CDS-3UTR CCA 90 bp GAGGGAACCCTGCCTACTTCCAAGCTGGGAGAGTGCCGTCCAGCGGCCAGTGCATGGAAGCGGCAGTACTaGCACTTGTTGCGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: EGTLPTSKLGECRPAASAWKRQY*HLLRFF
Trigger: GAAGAACCGCAACAAGTGCCAGTACTGCCGCTTCCA...TGCACTGGCCGCTGGACGGCACTCTCCCAGCTTGGAAGTAGGCAGGGTTCCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000448077.6
CDS-3UTR CCA 90 bp GGGCCCACCTGGAGGGAACCCTGCCTACTTCCAAGCTGGGAGAGTGCCGTCCAGCATTGTAGATGTGCTTaGAGAAGGCCTTCAGGTCGG +
Preference number: 4 (lower is better)
Translates to: GPTWREPCLLPSWESAVQHCRCA*RRPSGR
Trigger: CCGACCTGAAGGCCTTCTCCAAGCACATCTACAATG...CTGGACGGCACTCTCCCAGCTTGGAAGTAGGCAGGGTTCCCTCCAGGTGGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp AGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAAATGTCTCGATGTCGTaGATCACAAAGGGCGCCGTG +
Preference number: 4 (lower is better)
Translates to: RVPSSGQCRGPSATLAWQNVSMS*ITKGAV
Trigger: CACGGCGCCCTTTGTGATCCACGACATCGAGACATT...TTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp GGGCCCACCTGGAGGGAACCCTGCCTACTTCCAAGCTGGGAGAGTGCCGTCCAGTTGAGAAGGGTAACCTaGTCGTTGAGGAAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: GPTWREPCLLPSWESAVQLRRVT*SLRKRL
Trigger: CAGCCTCTTCCTCAACGACCAGGTTACCCTTCTCAA...CTGGACGGCACTCTCCCAGCTTGGAAGTAGGCAGGGTTCCCTCCAGGTGGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp TGGGAGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGTTGAGAAGGGTAACCTaGTCGTTGAGGAAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: WESAVQRPVQGAISNIGLLRRVT*SLRKRL
Trigger: CAGCCTCTTCCTCAACGACCAGGTTACCCTTCTCAA...CAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCTCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp AACCCCCATCAGCTGGGTAGGTGGGGAGCGGGAAGAATCCTGCCAGCAGAGAGTCCAGCATGGCGAAGATaGCCTCGTGCACGCCATACT +
Preference number: 4 (lower is better)
Translates to: NPHQLGRWGAGRILPAESPAWRR*PRARHT
Trigger: AGTATGGCGTGCACGAGGCCATCTTCGCCATGCTGG...ACTCTCTGCTGGCAGGATTCTTCCCGCTCCCCACCTACCCAGCTGATGGGGGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp CGTGGGACTCTGCTGCTCCAGGCCGGGTGCTCAAGGGCTGGTCAATGGAAAAGTCCAGCATGGCGAAGATaGCCTCGTGCACGCCATACT +
Preference number: 4 (lower is better)
Translates to: RGTLLLQAGCSRAGQWKSPAWRR*PRARHT
Trigger: AGTATGGCGTGCACGAGGCCATCTTCGCCATGCTGG...ACTTTTCCATTGACCAGCCCTTGAGCACCCGGCCTGGAGCAGCAGAGTCCCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp TCAAGGGCTGGTCAATGGAAAAGTCATGTGGGTGGGCCCCTCCAGTGCTGGCCCTTGGGGAAGAGGTACTaGGCATCAGGGTGGTTGGCC +
Preference number: 4 (lower is better)
Translates to: SRAGQWKSHVGGPLQCWPLGKRY*ASGWLA
Trigger: GGCCAACCACCCTGATGCCCAGTACCTCTTCCCCAA...GGGCCAGCACTGGAGGGGCCCACCCACATGACTTTTCCATTGACCAGCCCTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp AGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAACCAGTGTGAAGTTGGGGAAGAGGTACTaGGCATCAGGGTGGTTGGCC +
Preference number: 4 (lower is better)
Translates to: SGQCRGPSATLAWQTSVKLGKRY*ASGWLA
Trigger: GGCCAACCACCCTGATGCCCAGTACCTCTTCCCCAA...CTTCACACTGGTTTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp CGTGGGACTCTGCTGCTCCAGGCCGGGTGCTCAAGGGCTGGTCAATGGAAAAGTATCCGCTGCATCATCTaGGCGTGCTCGGTGACCAGT +
Preference number: 4 (lower is better)
Translates to: RGTLLLQAGCSRAGQWKSIRCII*ACSVTS
Trigger: ACTGGTCACCGAGCACGCCCAGATGATGCAGCGGAT...ACTTTTCCATTGACCAGCCCTTGAGCACCCGGCCTGGAGCAGCAGAGTCCCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp TCAAGGGCTGGTCAATGGAAAAGTCATGTGGGTGGGCCCCTCCAGTGCTGGCCCATCCGCTGCATCATCTaGGCGTGCTCGGTGACCAGT +
Preference number: 4 (lower is better)
Translates to: SRAGQWKSHVGGPLQCWPIRCII*ACSVTS
Trigger: ACTGGTCACCGAGCACGCCCAGATGATGCAGCGGAT...GGGCCAGCACTGGAGGGGCCCACCCACATGACTTTTCCATTGACCAGCCCTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp AGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAAATGGAAAAGTCATGTaGGTGGGCCCCTCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: RVPSSGQCRGPSATLAWQNGKVM*VGPSSA
Trigger: AGCACTGGAGGGGCCCACCCACATGACTTTTCCATT...TTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp CGTGGGACTCTGCTGCTCCAGGCCGGGTGCTCAAGGGCTGGTCAATGGAAAAGTGATCAGTTGGGTCAGTaGGTGGCCTCAGCATCGGAG +
Preference number: 4 (lower is better)
Translates to: RGTLLLQAGCSRAGQWKSDQLGQ*VASASE
Trigger: CTCCGATGCTGAGGCCACCCACTGACCCAACTGATC...ACTTTTCCATTGACCAGCCCTTGAGCACCCGGCCTGGAGCAGCAGAGTCCCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp AACCCCCATCAGCTGGGTAGGTGGGGAGCGGGAAGAATCCTGCCAGCAGAGAGTGATCAGTTGGGTCAGTaGGTGGCCTCAGCATCGGAG +
Preference number: 4 (lower is better)
Translates to: NPHQLGRWGAGRILPAESDQLGQ*VASASE
Trigger: CTCCGATGCTGAGGCCACCCACTGACCCAACTGATC...ACTCTCTGCTGGCAGGATTCTTCCCGCTCCCCACCTACCCAGCTGATGGGGGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp TCAAGGGCTGGTCAATGGAAAAGTCATGTGGGTGGGCCCCTCCAGTGCTGGCCCTGGAGCAGGATCAGTTaGGTCAGTGGGTGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: SRAGQWKSHVGGPLQCWPWSRIS*VSGWPQ
Trigger: CTGAGGCCACCCACTGACCCAACTGATCCTGCTCCA...GGGCCAGCACTGGAGGGGCCCACCCACATGACTTTTCCATTGACCAGCCCTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp CGTGGGACTCTGCTGCTCCAGGCCGGGTGCTCAAGGGCTGGTCAATGGAAAAGTGCTGAGGTGTGCTGCTaGAGCAGGATCAGTTGGGTC +
Preference number: 4 (lower is better)
Translates to: RGTLLLQAGCSRAGQWKSAEVCC*SRISWV
Trigger: GACCCAACTGATCCTGCTCCAGCAGCACACCTCAGC...ACTTTTCCATTGACCAGCCCTTGAGCACCCGGCCTGGAGCAGCAGAGTCCCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp TCAAGGGCTGGTCAATGGAAAAGTCATGTGGGTGGGCCCCTCCAGTGCTGGCCCGCTGAGGTGTGCTGCTaGAGCAGGATCAGTTGGGTC +
Preference number: 4 (lower is better)
Translates to: SRAGQWKSHVGGPLQCWPAEVCC*SRISWV
Trigger: GACCCAACTGATCCTGCTCCAGCAGCACACCTCAGC...GGGCCAGCACTGGAGGGGCCCACCCACATGACTTTTCCATTGACCAGCCCTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp GTGGGTGGCCTCAGCATCGGAGGGGCAATGACAGTCTTGGGGAGGCATCTGGCTAAGATGGAAGGACACTaGGTGTCAGTGGGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: VGGLSIGGAMTVLGRHLAKMEGH*VSVGLR
Trigger: CCTCAGCCCCACTGACACCCAGTGTCCTTCCATCTT...AGCCAGATGCCTCCCCAAGACTGTCATTGCCCCTCCGATGCTGAGGCCACCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp TCAAGGGCTGGTCAATGGAAAAGTCATGTGGGTGGGCCCCTCCAGTGCTGGCCCGATGCTGACACAATGTaGGCGGCTGCTACTGGGCAG +
Preference number: 4 (lower is better)
Translates to: SRAGQWKSHVGGPLQCWPDADTM*AAATGQ
Trigger: CTGCCCAGTAGCAGCCGCCCACATTGTGTCAGCATC...GGGCCAGCACTGGAGGGGCCCACCCACATGACTTTTCCATTGACCAGCCCTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp AACCCCCATCAGCTGGGTAGGTGGGGAGCGGGAAGAATCCTGCCAGCAGAGAGTGATGCTGACACAATGTaGGCGGCTGCTACTGGGCAG +
Preference number: 4 (lower is better)
Translates to: NPHQLGRWGAGRILPAESDADTM*AAATGQ
Trigger: CTGCCCAGTAGCAGCCGCCCACATTGTGTCAGCATC...ACTCTCTGCTGGCAGGATTCTTCCCGCTCCCCACCTACCCAGCTGATGGGGGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp AGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAACCAGTGTGAAGCATCAGCTGGGTAGGTaGGGAGCGGGAAGAATCCTG +
Preference number: 4 (lower is better)
Translates to: SGQCRGPSATLAWQTSVKHQLGR*GAGRIL
Trigger: CAGGATTCTTCCCGCTCCCCACCTACCCAGCTGATG...CTTCACACTGGTTTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp GTGGGTGGCCTCAGCATCGGAGGGGCAATGACAGTCTTGGGGAGGCATCTGGCTTGGACCTCTACAGGGTaGTTCCCATCAGCCTCGTTG +
Preference number: 4 (lower is better)
Translates to: VGGLSIGGAMTVLGRHLAWTSTG*FPSASL
Trigger: CAACGAGGCTGATGGGAACCACCCTGTAGAGGTCCA...AGCCAGATGCCTCCCCAAGACTGTCATTGCCCCTCCGATGCTGAGGCCACCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360694.8
ENST00000418635.6
CDS-3UTR TCA 90 bp AACCCCCATCAGCTGGGTAGGTGGGGAGCGGGAAGAATCCTGCCAGCAGAGAGTGCAGAAGCCACTGTGTaGGTATCACGTGCATGCCCA +
Preference number: 4 (lower is better)
Translates to: NPHQLGRWGAGRILPAESAEATV*VSRACP
Trigger: TGGGCATGCACGTGATACTCACACAGTGGCTTCTGC...ACTCTCTGCTGGCAGGATTCTTCCCGCTCCCCACCTACCCAGCTGATGGGGGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR TCA 90 bp CGTGGGACTCTGCTGCTCCAGGCCGGGTGCTCAAGGGCTGGTCAATGGAAAAGTGCAGAAGCCACTGTGTaGGTATCACGTGCATGCCCA +
Preference number: 4 (lower is better)
Translates to: RGTLLLQAGCSRAGQWKSAEATV*VSRACP
Trigger: TGGGCATGCACGTGATACTCACACAGTGGCTTCTGC...ACTTTTCCATTGACCAGCCCTTGAGCACCCGGCCTGGAGCAGCAGAGTCCCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR TCA 90 bp CGTGGGACTCTGCTGCTCCAGGCCGGGTGCTCAAGGGCTGGTCAATGGAAAAGTCGGTTTCGGTCTTCTTaGTCCGCTGCATCATCTGGG +
Preference number: 4 (lower is better)
Translates to: RGTLLLQAGCSRAGQWKSRFRSS*SAASSG
Trigger: CCCAGATGATGCAGCGGATCAAGAAGACCGAAACCG...ACTTTTCCATTGACCAGCCCTTGAGCACCCGGCCTGGAGCAGCAGAGTCCCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR TCA 90 bp TCAAGGGCTGGTCAATGGAAAAGTCATGTGGGTGGGCCCCTCCAGTGCTGGCCCCGGTTTCGGTCTTCTTaGTCCGCTGCATCATCTGGG +
Preference number: 4 (lower is better)
Translates to: SRAGQWKSHVGGPLQCWPRFRSS*SAASSG
Trigger: CCCAGATGATGCAGCGGATCAAGAAGACCGAAACCG...GGGCCAGCACTGGAGGGGCCCACCCACATGACTTTTCCATTGACCAGCCCTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR TCA 90 bp AGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAACCAGTGTGAAGGACAGGAGACAGAAGTaGGGACCTAAGCCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: SGQCRGPSATLAWQTSVKDRRQK*GPKPAG
Trigger: ACCTGCAGGCTTAGGTCCTCACTTCTGTCTCCTGTC...CTTCACACTGGTTTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR TCA 90 bp TCAAGGGCTGGTCAATGGAAAAGTCATGTGGGTGGGCCCCTCCAGTGCTGGCCCCCTGGCAAACCAGTGTaGAGATGGAAGGACACTGGG +
Preference number: 4 (lower is better)
Translates to: SRAGQWKSHVGGPLQCWPPGKPV*RWKDTG
Trigger: CCCAGTGTCCTTCCATCTTCACACTGGTTTGCCAGG...GGGCCAGCACTGGAGGGGCCCACCCACATGACTTTTCCATTGACCAGCCCTTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR TCA 90 bp CGTGGGACTCTGCTGCTCCAGGCCGGGTGCTCAAGGGCTGGTCAATGGAAAAGTTTCATAGCCTTGGCCTaGAAGGAAGCACCCCAACCC +
Preference number: 4 (lower is better)
Translates to: RGTLLLQAGCSRAGQWKSFIALA*KEAPQP
Trigger: GGGTTGGGGTGCTTCCTTTCAGGCCAAGGCTATGAA...ACTTTTCCATTGACCAGCCCTTGAGCACCCGGCCTGGAGCAGCAGAGTCCCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp GAAGGGAGGTGCATGGAGCCTGCAGGTAAAGTGATTTCAGTGCTTATGTGTGTGCAACACTGTCCCGGCTaGCTACGGCGCCACCGCCGC +
Preference number: 4 (lower is better)
Translates to: EGRCMEPAGKVISVLMCVQHCPG*LRRHRR
Trigger: GCGGCGGTGGCGCCGTAGGCAGCCGGGACAGTGTTG...CACACACATAAGCACTGAAATCACTTTACCTGCAGGCTCCATGCACCTCCCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp AACCCCCATCAGCTGGGTAGGTGGGGAGCGGGAAGAATCCTGCCAGCAGAGAGTCTCTGGGGCTCCTTCTaGCTCTGCCACTTCCTCTTT +
Preference number: 4 (lower is better)
Translates to: NPHQLGRWGAGRILPAESLWGSF*LCHFLF
Trigger: AAAGAGGAAGTGGCAGAGGCAGAAGGAGCCCCAGAG...ACTCTCTGCTGGCAGGATTCTTCCCGCTCCCCACCTACCCAGCTGATGGGGGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
CDS-3UTR GCA 90 bp CACAGGGACACTTCCCCACACTGTCAGAGCTCAGGCACAGTGCCCTGCAGTGAGCTCTGGGGCTCCTTCTaGCTCTGCCACTTCCTCTTT +
Preference number: 4 (lower is better)
Translates to: HRDTSPHCQSSGTVPCSELWGSF*LCHFLF
Trigger: AAAGAGGAAGTGGCAGAGGCAGAAGGAGCCCCAGAG...CTCACTGCAGGGCACTGTGCCTGAGCTCTGACAGTGTGGGGAAGTGTCCCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337400.6
CDS-3UTR GCA 90 bp CGTGGGACTCTGCTGCTCCAGGCCGGGTGCTCAAGGGCTGGTCAATGGAAAAGTCTGGAAGGAAGTGCATaGTGTGGTCCCCCATTGAGC +
Preference number: 4 (lower is better)
Translates to: RGTLLLQAGCSRAGQWKSLEGSA*CGPPLS
Trigger: GCTCAATGGGGGACCACAGCATGCACTTCCTTCCAG...ACTTTTCCATTGACCAGCCCTTGAGCACCCGGCCTGGAGCAGCAGAGTCCCACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
CDS-3UTR GCA 90 bp CGTGGGACTCTGCTGCTCCAGGCCGGGTGCTCAAGGGCTGGTCAATGGAAAAGTGCTGCTGGAAGGAAGTaGATGCTGTGGTCCCCCATT +
Preference number: 4 (lower is better)
Translates to: RGTLLLQAGCSRAGQWKSAAGRK*MLWSPI
Trigger: AATGGGGGACCACAGCATGCACTTCCTTCCAGCAGC...ACTTTTCCATTGACCAGCCCTTGAGCACCCGGCCTGGAGCAGCAGAGTCCCACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
CDS-3UTR GCA 90 bp AGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAAGAGGTCTGTGTAGCTaGTGGAAGGAAGTGCATGCT +
Preference number: 4 (lower is better)
Translates to: RVPSSGQCRGPSATLAWQRGLCS*WKEVHA
Trigger: AGCATGCACTTCCTTCCAGCAGCTACACAGACCTCT...TTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311565.4
ENST00000360694.8
CDS-3UTR GCA 90 bp GTGGGTGGCCTCAGCATCGGAGGGGCAATGACAGTCTTGGGGAGGCATCTGGCTCGTACTCCAGCTTCATaGGGATCGTACGACGGAAGA +
Preference number: 4 (lower is better)
Translates to: VGGLSIGGAMTVLGRHLARTPAS*GSYDGR
Trigger: TCTTCCGTCGTACGATCCGCATGAAGCTGGAGTACG...AGCCAGATGCCTCCCCAAGACTGTCATTGCCCCTCCGATGCTGAGGCCACCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000448077.6
CDS-3UTR GCA 90 bp TCAAGGGCTGGTCAATGGAAAAGTCATGTGGGTGGGCCCCTCCAGTGCTGGCCCGTTTGCAGTCAGCCCTaGCACCAGCTTCCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: SRAGQWKSHVGGPLQCWPVCSQP*HQLPLL
Trigger: GAGAAGAGGAAGCTGGTGGCAGGGCTGACTGCAAAC...GGGCCAGCACTGGAGGGGCCCACCCACATGACTTTTCCATTGACCAGCCCTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp AACCCCCATCAGCTGGGTAGGTGGGGAGCGGGAAGAATCCTGCCAGCAGAGAGTCACCAGCCCCTTCTCTaGCTGCCACAATGTCTCGAT +
Preference number: 4 (lower is better)
Translates to: NPHQLGRWGAGRILPAESHQPLL*LPQCLD
Trigger: ATCGAGACATTGTGGCAGGCAGAGAAGGGGCTGGTG...ACTCTCTGCTGGCAGGATTCTTCCCGCTCCCCACCTACCCAGCTGATGGGGGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp AGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAACCAGTGTGAAGCACCAGCCCCTTCTCTaGCTGCCACAATGTCTCGAT +
Preference number: 4 (lower is better)
Translates to: SGQCRGPSATLAWQTSVKHQPLL*LPQCLD
Trigger: ATCGAGACATTGTGGCAGGCAGAGAAGGGGCTGGTG...CTTCACACTGGTTTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp AACCCCCATCAGCTGGGTAGGTGGGGAGCGGGAAGAATCCTGCCAGCAGAGAGTAGGCCATTCACCAACTaGTTCCACACCAGCCCCTTC +
Preference number: 4 (lower is better)
Translates to: NPHQLGRWGAGRILPAESRPFTN*FHTSPF
Trigger: GAAGGGGCTGGTGTGGAAGCAGTTGGTGAATGGCCT...ACTCTCTGCTGGCAGGATTCTTCCCGCTCCCCACCTACCCAGCTGATGGGGGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp TCAAGGGCTGGTCAATGGAAAAGTCATGTGGGTGGGCCCCTCCAGTGCTGGCCCGCGAAGATGGCCTCGTaGACGCCATACTTGAGAAGG +
Preference number: 4 (lower is better)
Translates to: SRAGQWKSHVGGPLQCWPAKMAS*TPYLRR
Trigger: CCTTCTCAAGTATGGCGTGCACGAGGCCATCTTCGC...GGGCCAGCACTGGAGGGGCCCACCCACATGACTTTTCCATTGACCAGCCCTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp AGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAACCAGTGTGAAGGTCTTCTTGATCCGCTaGATCATCTGGGCGTGCTCG +
Preference number: 4 (lower is better)
Translates to: SGQCRGPSATLAWQTSVKVFLIR*IIWACS
Trigger: CGAGCACGCCCAGATGATGCAGCGGATCAAGAAGAC...CTTCACACTGGTTTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp TCAAGGGCTGGTCAATGGAAAAGTCATGTGGGTGGGCCCCTCCAGTGCTGGCCCATGACTATAGGGGGCTaGAGTCAGTCCAGGCCATGC +
Preference number: 4 (lower is better)
Translates to: SRAGQWKSHVGGPLQCWPMTIGG*SQSRPC
Trigger: GCATGGCCTGGACTGACTGCAGCCCCCTATAGTCAT...GGGCCAGCACTGGAGGGGCCCACCCACATGACTTTTCCATTGACCAGCCCTTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp CGTGGGACTCTGCTGCTCCAGGCCGGGTGCTCAAGGGCTGGTCAATGGAAAAGTATGACTATAGGGGGCTaGAGTCAGTCCAGGCCATGC +
Preference number: 4 (lower is better)
Translates to: RGTLLLQAGCSRAGQWKSMTIGG*SQSRPC
Trigger: GCATGGCCTGGACTGACTGCAGCCCCCTATAGTCAT...ACTTTTCCATTGACCAGCCCTTGAGCACCCGGCCTGGAGCAGCAGAGTCCCACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp CGTGGGACTCTGCTGCTCCAGGCCGGGTGCTCAAGGGCTGGTCAATGGAAAAGTGTTCTCCTACCTCTGTaGTCTGAGACTCCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: RGTLLLQAGCSRAGQWKSVLLPL*SETPAS
Trigger: GCTGGCTGGAGTCTCAGAGCACAGAGGTAGGAGAAC...ACTTTTCCATTGACCAGCCCTTGAGCACCCGGCCTGGAGCAGCAGAGTCCCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp AGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAACCAGTGTGAAGGTTCTCCTACCTCTGTaGTCTGAGACTCCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: SGQCRGPSATLAWQTSVKVLLPL*SETPAS
Trigger: GCTGGCTGGAGTCTCAGAGCACAGAGGTAGGAGAAC...CTTCACACTGGTTTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp TGGGAGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGCATCAGCCTCGTTGGTaGATCTGTCTTCATCTGTTG +
Preference number: 4 (lower is better)
Translates to: WESAVQRPVQGAISNIGLHQPRW*ICLHLL
Trigger: CAACAGATGAAGACAGATGCACCAACGAGGCTGATG...CAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCTCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360694.8
ENST00000418635.6
CDS-3UTR GCA 90 bp GGGCCCACCTGGAGGGAACCCTGCCTACTTCCAAGCTGGGAGAGTGCCGTCCAGGAGAGGTCTCGTTGGTaGATCTGTCTTCATCTGTTG +
Preference number: 4 (lower is better)
Translates to: GPTWREPCLLPSWESAVQERSRW*ICLHLL
Trigger: CAACAGATGAAGACAGATGCACCAACGAGACCTCTC...CTGGACGGCACTCTCCCAGCTTGGAAGTAGGCAGGGTTCCCTCCAGGTGGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448077.6
CDS-3UTR CCA 90 bp AGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAACCAGTGTGAAGGGGTCTGAACGCAGATaGACCTCTACAGGGTGGTTC +
Preference number: 4 (lower is better)
Translates to: SGQCRGPSATLAWQTSVKGSERR*TSTGWF
Trigger: GAACCACCCTGTAGAGGTCCATCTGCGTTCAGACCC...CTTCACACTGGTTTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
CDS-3UTR CCA 90 bp CGTGGGACTCTGCTGCTCCAGGCCGGGTGCTCAAGGGCTGGTCAATGGAAAAGTAGGAAGTGCATGCTGTaGTCCCCCATTGAGCTCTGG +
Preference number: 4 (lower is better)
Translates to: RGTLLLQAGCSRAGQWKSRKCML*SPIELW
Trigger: CCAGAGCTCAATGGGGGACCACAGCATGCACTTCCT...ACTTTTCCATTGACCAGCCCTTGAGCACCCGGCCTGGAGCAGCAGAGTCCCACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
CDS-3UTR CCA 90 bp TCAAGGGCTGGTCAATGGAAAAGTCATGTGGGTGGGCCCCTCCAGTGCTGGCCCACCTGTGGGTTGTACTaGCTCCCCTCGTTTGCAGTC +
Preference number: 4 (lower is better)
Translates to: SRAGQWKSHVGGPLQCWPTCGLY*LPSFAV
Trigger: GACTGCAAACGAGGGGAGCCAGTACAACCCACAGGT...GGGCCAGCACTGGAGGGGCCCACCCACATGACTTTTCCATTGACCAGCCCTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp AGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAACCAGTGTGAAGACCTGTGGGTTGTACTaGCTCCCCTCGTTTGCAGTC +
Preference number: 4 (lower is better)
Translates to: SGQCRGPSATLAWQTSVKTCGLY*LPSFAV
Trigger: GACTGCAAACGAGGGGAGCCAGTACAACCCACAGGT...CTTCACACTGGTTTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp AGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAACATTGTAGATGTGCTTaGAGAAGGCCTTCAGGTCGG +
Preference number: 4 (lower is better)
Translates to: RVPSSGQCRGPSATLAWQHCRCA*RRPSGR
Trigger: CCGACCTGAAGGCCTTCTCCAAGCACATCTACAATG...TTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp CTGCCAAGATCACAGGGACACTTCCCCACACTGTCAGAGCTCAGGCACAGTGCCCCAGCATGGCGAAGATaGCCTCGTGCACGCCATACT +
Preference number: 4 (lower is better)
Translates to: LPRSQGHFPTLSELRHSAPAWRR*PRARHT
Trigger: AGTATGGCGTGCACGAGGCCATCTTCGCCATGCTGG...GGCACTGTGCCTGAGCTCTGACAGTGTGGGGAAGTGTCCCTGTGATCTTGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337400.6
CDS-3UTR CCA 90 bp GTGGGTGGCCTCAGCATCGGAGGGGCAATGACAGTCTTGGGGAGGCATCTGGCTAACGTTCATGAGGCCTaGCCGGTCTCCACACAGAAT +
Preference number: 4 (lower is better)
Translates to: VGGLSIGGAMTVLGRHLANVHEA*PVSTQN
Trigger: ATTCTGTGTGGAGACCGGCCAGGCCTCATGAACGTT...AGCCAGATGCCTCCCCAAGACTGTCATTGCCCCTCCGATGCTGAGGCCACCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp AACCCCCATCAGCTGGGTAGGTGGGGAGCGGGAAGAATCCTGCCAGCAGAGAGTTACTGGGCATCAGGGTaGTTGGCCTGCAGGTGGAAT +
Preference number: 4 (lower is better)
Translates to: NPHQLGRWGAGRILPAESYWASG*LACRWN
Trigger: ATTCCACCTGCAGGCCAACCACCCTGATGCCCAGTA...ACTCTCTGCTGGCAGGATTCTTCCCGCTCCCCACCTACCCAGCTGATGGGGGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp GTGGGTGGCCTCAGCATCGGAGGGGCAATGACAGTCTTGGGGAGGCATCTGGCTAATGGAAAAGTCATGTaGGTGGGCCCCTCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: VGGLSIGGAMTVLGRHLANGKVM*VGPSSA
Trigger: AGCACTGGAGGGGCCCACCCACATGACTTTTCCATT...AGCCAGATGCCTCCCCAAGACTGTCATTGCCCCTCCGATGCTGAGGCCACCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp CCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAACCAGTTCAAGGGCTGGTCAATaGAAAAGTCATGTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: PSSGQCRGPSATLAWQTSSRAGQ*KSHVGG
Trigger: CCCACCCACATGACTTTTCCATTGACCAGCCCTTGA...ACTGGTTTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp TCAAGGGCTGGTCAATGGAAAAGTCATGTGGGTGGGCCCCTCCAGTGCTGGCCCAAGATGGAAGGACACTaGGTGTCAGTGGGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: SRAGQWKSHVGGPLQCWPKMEGH*VSVGLR
Trigger: CCTCAGCCCCACTGACACCCAGTGTCCTTCCATCTT...GGGCCAGCACTGGAGGGGCCCACCCACATGACTTTTCCATTGACCAGCCCTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp AACCCCCATCAGCTGGGTAGGTGGGGAGCGGGAAGAATCCTGCCAGCAGAGAGTAAGATGGAAGGACACTaGGTGTCAGTGGGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: NPHQLGRWGAGRILPAESKMEGH*VSVGLR
Trigger: CCTCAGCCCCACTGACACCCAGTGTCCTTCCATCTT...ACTCTCTGCTGGCAGGATTCTTCCCGCTCCCCACCTACCCAGCTGATGGGGGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp AAGGGGAGGGCAGTAGAGCTATTGGGACAAATGGACATCAGAATGAACAGGCTCCCGGGGAGGGGGAGGTaGGTCCCAGCAGCTGTCCCT +
Preference number: 4 (lower is better)
Translates to: KGRAVELLGQMDIRMNRLPGRGR*VPAAVP
Trigger: AGGGACAGCTGCTGGGACCCACCTCCCCCTCCCCGG...GAGCCTGTTCATTCTGATGTCCATTTGTCCCAATAGCTCTACTGCCCTCCCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp CCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAACCAGTTCCCATCAGCCTCGTTaGTGCATCTGTCTTCATCTG +
Preference number: 4 (lower is better)
Translates to: PSSGQCRGPSATLAWQTSSHQPR*CICLHL
Trigger: CAGATGAAGACAGATGCACCAACGAGGCTGATGGGA...ACTGGTTTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360694.8
ENST00000418635.6
CDS-3UTR TCA 90 bp GAAGGGAGGTGCATGGAGCCTGCAGGTAAAGTGATTTCAGTGCTTATGTGTGTGCCCGGCACTCCATGTTaGGGCTGCCGCATGAGGCCC +
Preference number: 4 (lower is better)
Translates to: EGRCMEPAGKVISVLMCVPGTPC*GCRMRP
Trigger: GGGCCTCATGCGGCAGCCTCAACATGGAGTGCCGGG...CACACACATAAGCACTGAAATCACTTTACCTGCAGGCTCCATGCACCTCCCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000448077.6
CDS-3UTR TCA 90 bp CTCAGTCAGTGCCTTGCATGTTCCACTGCCAAGATCACAGGGACACTTCCCCACTCTTGGCGAACTCAGTaGGCTCCCGCACGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: LSQCLACSTAKITGTLPHSWRTQ*APARSP
Trigger: TGGAGACCGTGCGGGAGCTCACTGAGTTCGCCAAGA...GTGGGGAAGTGTCCCTGTGATCTTGGCAGTGGAACATGCAAGGCACTGACTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337400.6
CDS-3UTR TCA 90 bp AAGGGGAGGGCAGTAGAGCTATTGGGACAAATGGACATCAGAATGAACAGGCTCAGGGGGAGTGGGGCCTaGACTCCCGTGGAGCCAGCT +
Preference number: 4 (lower is better)
Translates to: KGRAVELLGQMDIRMNRLRGSGA*TPVEPA
Trigger: AGCTGGCTCCACGGGAGTTCAGGCCCCACTCCCCCT...GAGCCTGTTCATTCTGATGTCCATTTGTCCCAATAGCTCTACTGCCCTCCCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR TCA 90 bp GGGCCCACCTGGAGGGAACCCTGCCTACTTCCAAGCTGGGAGAGTGCCGTCCAGAGATTGTTCAGACACTaGGAAGAGCTGTATCCTCAG +
Preference number: 4 (lower is better)
Translates to: GPTWREPCLLPSWESAVQRLFRH*EELYPQ
Trigger: CTGAGGATACAGCTCTTCTCAGTGTCTGAACAATCT...CTGGACGGCACTCTCCCAGCTTGGAAGTAGGCAGGGTTCCCTCCAGGTGGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp AGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAATCCTGTAGAGATCACTaGTCCACGGGCTTCAGTTTT +
Preference number: 4 (lower is better)
Translates to: RVPSSGQCRGPSATLAWQSCRDH*STGFSF
Trigger: AAAACTGAAGCCCGTGGAGCAGTGATCTCTACAGGA...TTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311565.4
CDS-3UTR GCA 90 bp TCAAGGGCTGGTCAATGGAAAAGTCATGTGGGTGGGCCCCTCCAGTGCTGGCCCGACGGAAGAAGCCCTTaGACCCCTCACATGCATGAA +
Preference number: 4 (lower is better)
Translates to: SRAGQWKSHVGGPLQCWPDGRSP*TPHMHE
Trigger: TTCATGCATGTGAGGGGTGCAAGGGCTTCTTCCGTC...GGGCCAGCACTGGAGGGGCCCACCCACATGACTTTTCCATTGACCAGCCCTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000448077.6
CDS-3UTR GCA 90 bp AGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAATCTGAATCTTGCAGCTaGGCTCACACTTCTCGTACT +
Preference number: 4 (lower is better)
Translates to: RVPSSGQCRGPSATLAWQSESCS*AHTSRT
Trigger: AGTACGAGAAGTGTGAGCGCAGCTGCAAGATTCAGA...TTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000448077.6
CDS-3UTR GCA 90 bp CTGCCAAGATCACAGGGACACTTCCCCACACTGTCAGAGCTCAGGCACAGTGCCGCGAAGATGGCCTCGTaGACGCCATACTTGAGAAGG +
Preference number: 4 (lower is better)
Translates to: LPRSQGHFPTLSELRHSAAKMAS*TPYLRR
Trigger: CCTTCTCAAGTATGGCGTGCACGAGGCCATCTTCGC...GGCACTGTGCCTGAGCTCTGACAGTGTGGGGAAGTGTCCCTGTGATCTTGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337400.6
CDS-3UTR GCA 90 bp TGGGAGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGATGGCTCAAGTCTTTTaGTCTGAAGACAGGAGACAG +
Preference number: 4 (lower is better)
Translates to: WESAVQRPVQGAISNIGLMAQVF*SEDRRQ
Trigger: CTGTCTCCTGTCTTCAGAGCAAAAGACTTGAGCCAT...CAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCTCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp GAAGGGAGGTGCATGGAGCCTGCAGGTAAAGTGATTTCAGTGCTTATGTGTGTGTGGCCCAGCCCTGCCTaGTCACCTGCAGGCCCCTCT +
Preference number: 4 (lower is better)
Translates to: EGRCMEPAGKVISVLMCVWPSPA*SPAGPS
Trigger: AGAGGGGCCTGCAGGTGAGCAGGCAGGGCTGGGCCA...CACACACATAAGCACTGAAATCACTTTACCTGCAGGCTCCATGCACCTCCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp AAGGGGAGGGCAGTAGAGCTATTGGGACAAATGGACATCAGAATGAACAGGCTCGCATGGAAGGGAGGCTaGAGCGCCCGTAGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: KGRAVELLGQMDIRMNRLAWKGG*SARRGR
Trigger: CCTGCCCCTACGGGCGCTGCAGCCTCCCTTCCATGC...GAGCCTGTTCATTCTGATGTCCATTTGTCCCAATAGCTCTACTGCCCTCCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp AGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAACATCAGCCTCGTTGGTaGATCTGTCTTCATCTGTTG +
Preference number: 4 (lower is better)
Translates to: RVPSSGQCRGPSATLAWQHQPRW*ICLHLL
Trigger: CAACAGATGAAGACAGATGCACCAACGAGGCTGATG...TTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360694.8
ENST00000418635.6
CDS-3UTR CCA 90 bp CATGTTCCACTGCCAAGATCACAGGGACACTTCCCCACACTGTCAGAGCTCAGGTCCCCCATTGAGCTCTaGGGCTCCTTCTGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: HVPLPRSQGHFPTLSELRSPIEL*GSFCLC
Trigger: GCAGAGGCAGAAGGAGCCCCAGAGCTCAATGGGGGA...CCTGAGCTCTGACAGTGTGGGGAAGTGTCCCTGTGATCTTGGCAGTGGAACATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337400.6
CDS-3UTR CCA 90 bp AGTGCCTTGCATGTTCCACTGCCAAGATCACAGGGACACTTCCCCACACTGTCACAGGTCGGCCACCTGTaGGTTGTACTGGCTCCCCTC +
Preference number: 4 (lower is better)
Translates to: SALHVPLPRSQGHFPTLSQVGHL*VVLAPL
Trigger: GAGGGGAGCCAGTACAACCCACAGGTGGCCGACCTG...TGACAGTGTGGGGAAGTGTCCCTGTGATCTTGGCAGTGGAACATGCAAGGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337400.6
CDS-3UTR CCA 90 bp AGTGCCTTGCATGTTCCACTGCCAAGATCACAGGGACACTTCCCCACACTGTCAACAAAGGGCGCCGTGTaGCTGGCTTTGCCGGTGAGG +
Preference number: 4 (lower is better)
Translates to: SALHVPLPRSQGHFPTLSTKGAV*LALPVR
Trigger: CCTCACCGGCAAAGCCAGCCACACGGCGCCCTTTGT...TGACAGTGTGGGGAAGTGTCCCTGTGATCTTGGCAGTGGAACATGCAAGGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337400.6
CDS-3UTR CCA 90 bp AACCCCCATCAGCTGGGTAGGTGGGGAGCGGGAAGAATCCTGCCAGCAGAGAGTAATGTCTCGATGTCGTaGATCACAAAGGGCGCCGTG +
Preference number: 4 (lower is better)
Translates to: NPHQLGRWGAGRILPAESNVSMS*ITKGAV
Trigger: CACGGCGCCCTTTGTGATCCACGACATCGAGACATT...ACTCTCTGCTGGCAGGATTCTTCCCGCTCCCCACCTACCCAGCTGATGGGGGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp TCAAGGGCTGGTCAATGGAAAAGTCATGTGGGTGGGCCCCTCCAGTGCTGGCCCTCTTCTGCAGCAGCTTaGGGAAGAGGTACTGGGCAT +
Preference number: 4 (lower is better)
Translates to: SRAGQWKSHVGGPLQCWPSSAAA*GRGTGH
Trigger: ATGCCCAGTACCTCTTCCCCAAGCTGCTGCAGAAGA...GGGCCAGCACTGGAGGGGCCCACCCACATGACTTTTCCATTGACCAGCCCTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp AACCCCCATCAGCTGGGTAGGTGGGGAGCGGGAAGAATCCTGCCAGCAGAGAGTTCTTCTGCAGCAGCTTaGGGAAGAGGTACTGGGCAT +
Preference number: 4 (lower is better)
Translates to: NPHQLGRWGAGRILPAESSSAAA*GRGTGH
Trigger: ATGCCCAGTACCTCTTCCCCAAGCTGCTGCAGAAGA...ACTCTCTGCTGGCAGGATTCTTCCCGCTCCCCACCTACCCAGCTGATGGGGGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp CGTGGGACTCTGCTGCTCCAGGCCGGGTGCTCAAGGGCTGGTCAATGGAAAAGTTCTTCTGCAGCAGCTTaGGGAAGAGGTACTGGGCAT +
Preference number: 4 (lower is better)
Translates to: RGTLLLQAGCSRAGQWKSSSAAA*GRGTGH
Trigger: ATGCCCAGTACCTCTTCCCCAAGCTGCTGCAGAAGA...ACTTTTCCATTGACCAGCCCTTGAGCACCCGGCCTGGAGCAGCAGAGTCCCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp AGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAACCAGTGTGAAGAATGGAAAAGTCATGTaGGTGGGCCCCTCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: SGQCRGPSATLAWQTSVKNGKVM*VGPSSA
Trigger: AGCACTGGAGGGGCCCACCCACATGACTTTTCCATT...CTTCACACTGGTTTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp GTGGGTGGCCTCAGCATCGGAGGGGCAATGACAGTCTTGGGGAGGCATCTGGCTTCAAGGGCTGGTCAATaGAAAAGTCATGTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: VGGLSIGGAMTVLGRHLASRAGQ*KSHVGG
Trigger: CCCACCCACATGACTTTTCCATTGACCAGCCCTTGA...AGCCAGATGCCTCCCCAAGACTGTCATTGCCCCTCCGATGCTGAGGCCACCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp GAAGGGAGGTGCATGGAGCCTGCAGGTAAAGTGATTTCAGTGCTTATGTGTGTGTTGCCCCTGCAGGCCTaGAGGGCTCTGCGCCGCTCA +
Preference number: 4 (lower is better)
Translates to: EGRCMEPAGKVISVLMCVLPLQA*RALRRS
Trigger: TGAGCGGCGCAGAGCCCTCCAGGCCTGCAGGGGCAA...CACACACATAAGCACTGAAATCACTTTACCTGCAGGCTCCATGCACCTCCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR TCA 90 bp CTCAGTCAGTGCCTTGCATGTTCCACTGCCAAGATCACAGGGACACTTCCCCACACGGATAGCGTTGTGTaGCATGCCCAGTGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: LSQCLACSTAKITGTLPHTDSVV*HAQCQA
Trigger: TGCCTGGCACTGGGCATGTCACACAACGCTATCCGT...GTGGGGAAGTGTCCCTGTGATCTTGGCAGTGGAACATGCAAGGCACTGACTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337400.6
CDS-3UTR TCA 90 bp GAAGGGAGGTGCATGGAGCCTGCAGGTAAAGTGATTTCAGTGCTTATGTGTGTGCCCGTGGAACGTTCATaGGGCCTGGCCGGTCTCCAC +
Preference number: 4 (lower is better)
Translates to: EGRCMEPAGKVISVLMCVPVERS*GLAGLH
Trigger: GTGGAGACCGGCCAGGCCTCATGAACGTTCCACGGG...CACACACATAAGCACTGAAATCACTTTACCTGCAGGCTCCATGCACCTCCCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR TCA 90 bp AAGGGGAGGGCAGTAGAGCTATTGGGACAAATGGACATCAGAATGAACAGGCTCAGCCTGCAGGTGCAATaGTGGGGCAGAGGGCAGGCC +
Preference number: 4 (lower is better)
Translates to: KGRAVELLGQMDIRMNRLSLQVQ*WGRGQA
Trigger: GGCCTGCCCTCTGCCCCATCATTGCACCTGCAGGCT...GAGCCTGTTCATTCTGATGTCCATTTGTCCCAATAGCTCTACTGCCCTCCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR TCA 90 bp GAAGGGAGGTGCATGGAGCCTGCAGGTAAAGTGATTTCAGTGCTTATGTGTGTGAGCCTGCAGGTGCAATaGTGGGGCAGAGGGCAGGCC +
Preference number: 4 (lower is better)
Translates to: EGRCMEPAGKVISVLMCVSLQVQ*WGRGQA
Trigger: GGCCTGCCCTCTGCCCCATCATTGCACCTGCAGGCT...CACACACATAAGCACTGAAATCACTTTACCTGCAGGCTCCATGCACCTCCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR TCA 90 bp GAAGGGAGGTGCATGGAGCCTGCAGGTAAAGTGATTTCAGTGCTTATGTGTGTGCCTGGCCCTGGATGCTaGCACAATGTGGGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: EGRCMEPAGKVISVLMCVPGPGC*HNVGGC
Trigger: GCAGCCGCCCACATTGTGTCAGCATCCAGGGCCAGG...CACACACATAAGCACTGAAATCACTTTACCTGCAGGCTCCATGCACCTCCCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR TCA 90 bp AAGGGGAGGGCAGTAGAGCTATTGGGACAAATGGACATCAGAATGAACAGGCTCCCTGGCCCTGGATGCTaGCACAATGTGGGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: KGRAVELLGQMDIRMNRLPGPGC*HNVGGC
Trigger: GCAGCCGCCCACATTGTGTCAGCATCCAGGGCCAGG...GAGCCTGTTCATTCTGATGTCCATTTGTCCCAATAGCTCTACTGCCCTCCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR TCA 90 bp AGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAAGCCTGCAGGTAAAGTaGTTTCAGTGCTTATGTGTG +
Preference number: 4 (lower is better)
Translates to: RVPSSGQCRGPSATLAWQSLQVK*FQCLCV
Trigger: CACACATAAGCACTGAAATCACTTTACCTGCAGGCT...TTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR TCA 90 bp GGGCCCACCTGGAGGGAACCCTGCCTACTTCCAAGCTGGGAGAGTGCCGTCCAGAAATGGACATCAGAATaGACAGGCTCAGTTTATCCC +
Preference number: 4 (lower is better)
Translates to: GPTWREPCLLPSWESAVQKWTSE*TGSVYP
Trigger: GGGATAAACTGAGCCTGTTCATTCTGATGTCCATTT...CTGGACGGCACTCTCCCAGCTTGGAAGTAGGCAGGGTTCCCTCCAGGTGGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp ACCTCTATCTACGTACATAATGAGATGGAGCTGATCCTGCATGCTCAGTCAGTGCAACACTGTCCCGGCTaGCTACGGCGCCACCGCCGC +
Preference number: 4 (lower is better)
Translates to: TSIYVHNEMELILHAQSVQHCPG*LRRHRR
Trigger: GCGGCGGTGGCGCCGTAGGCAGCCGGGACAGTGTTG...CACTGACTGAGCATGCAGGATCAGCTCCATCTCATTATGTACGTAGATAGAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337400.6
CDS-3UTR GCA 90 bp AGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAACCAGTGTGAAGCCAGACCCTCGTTGGTaGATCTGTCTTCATCTGTTG +
Preference number: 4 (lower is better)
Translates to: SGQCRGPSATLAWQTSVKPDPRW*ICLHLL
Trigger: CAACAGATGAAGACAGATGCACCAACGAGGGTCTGG...CTTCACACTGGTTTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311565.4
CDS-3UTR GCA 90 bp GAGGGAACCCTGCCTACTTCCAAGCTGGGAGAGTGCCGTCCAGCGGCCAGTGCATCTTCTTCTGAATCTTaGAGCTGCGCTCACACTTCT +
Preference number: 4 (lower is better)
Translates to: EGTLPTSKLGECRPAASASSSES*SCAHTS
Trigger: AGAAGTGTGAGCGCAGCTGCAAGATTCAGAAGAAGA...TGCACTGGCCGCTGGACGGCACTCTCCCAGCTTGGAAGTAGGCAGGGTTCCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000448077.6
CDS-3UTR GCA 90 bp AACCCCCATCAGCTGGGTAGGTGGGGAGCGGGAAGAATCCTGCCAGCAGAGAGTCCTTCTCTTGAGACTTaGTCCTCTTCAGTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: NPHQLGRWGAGRILPAESPSLET*SSSVRW
Trigger: CCACCTCACTGAAGAGGAGCAAGTCTCAAGAGAAGG...ACTCTCTGCTGGCAGGATTCTTCCCGCTCCCCACCTACCCAGCTGATGGGGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp AGTGCCTTGCATGTTCCACTGCCAAGATCACAGGGACACTTCCCCACACTGTCAAGAGCTCAGGCACAGTaGCCTGCAGTGAGGGCCAAC +
Preference number: 4 (lower is better)
Translates to: SALHVPLPRSQGHFPTLSRAQAQ*PAVRAN
Trigger: GTTGGCCCTCACTGCAGGGCACTGTGCCTGAGCTCT...TGACAGTGTGGGGAAGTGTCCCTGTGATCTTGGCAGTGGAACATGCAAGGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337400.6
CDS-3UTR CCA 90 bp AAGGGGAGGGCAGTAGAGCTATTGGGACAAATGGACATCAGAATGAACAGGCTCCCTGTGGCTGCTCCATaGCTGATCTCCCCTCGGCGC +
Preference number: 4 (lower is better)
Translates to: KGRAVELLGQMDIRMNRLPVAAP*LISPRR
Trigger: GCGCCGAGGGGAGATCAGCCATGGAGCAGCCACAGG...GAGCCTGTTCATTCTGATGTCCATTTGTCCCAATAGCTCTACTGCCCTCCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
CDS-3UTR CCA 90 bp CAAGATCACAGGGACACTTCCCCACACTGTCAGAGCTCAGGCACAGTGCCCTGCGGTCTGTGTAGCTGCTaGAAGGAAGTGCATGCTGTG +
Preference number: 4 (lower is better)
Translates to: QDHRDTSPHCQSSGTVPCGLCSC*KEVHAV
Trigger: CACAGCATGCACTTCCTTCCAGCAGCTACACAGACC...GCAGGGCACTGTGCCTGAGCTCTGACAGTGTGGGGAAGTGTCCCTGTGATCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337400.6
CDS-3UTR CCA 90 bp AGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAACCAGTGTGAAGCATTGTAGATGTGCTTaGAGAAGGCCTTCAGGTCGG +
Preference number: 4 (lower is better)
Translates to: SGQCRGPSATLAWQTSVKHCRCA*RRPSGR
Trigger: CCGACCTGAAGGCCTTCTCCAAGCACATCTACAATG...CTTCACACTGGTTTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp GAAGGGAGGTGCATGGAGCCTGCAGGTAAAGTGATTTCAGTGCTTATGTGTGTGGGGCCCCTCCAGTGCTaGCCCCATTGGAGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: EGRCMEPAGKVISVLMCVGPLQC*PHWSLQ
Trigger: CTGCAGACTCCAATGGGGCCAGCACTGGAGGGGCCC...CACACACATAAGCACTGAAATCACTTTACCTGCAGGCTCCATGCACCTCCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp AACCCCCATCAGCTGGGTAGGTGGGGAGCGGGAAGAATCCTGCCAGCAGAGAGTTCCCATCAGCCTCGTTaGTGCATCTGTCTTCATCTG +
Preference number: 4 (lower is better)
Translates to: NPHQLGRWGAGRILPAESSHQPR*CICLHL
Trigger: CAGATGAAGACAGATGCACCAACGAGGCTGATGGGA...ACTCTCTGCTGGCAGGATTCTTCCCGCTCCCCACCTACCCAGCTGATGGGGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360694.8
ENST00000418635.6
CDS-3UTR TCA 90 bp GAAGGGAGGTGCATGGAGCCTGCAGGTAAAGTGATTTCAGTGCTTATGTGTGTGGCTGTGGTCCCCCATTaGGCTCTGGGGCTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: EGRCMEPAGKVISVLMCVAVVPH*ALGLLL
Trigger: CAGAAGGAGCCCCAGAGCTCAATGGGGGACCACAGC...CACACACATAAGCACTGAAATCACTTTACCTGCAGGCTCCATGCACCTCCCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
CDS-3UTR TCA 90 bp GCAGAGAGTGATCCTGGGGCATGGAAGGGAGGCTGCAGCGCCCGTAGGGGCAGGTCTTTTTGGTCATGTTaGAGTTTTTCAGGTAGGCAT +
Preference number: 4 (lower is better)
Translates to: AESDPGAWKGGCSARRGRSFWSC*SFSGRH
Trigger: ATGCCTACCTGAAAAACTTCAACATGACCAAAAAGA...CCTGCCCCTACGGGCGCTGCAGCCTCCCTTCCATGCCCCAGGATCACTCTCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR TCA 90 bp CATGTTCCACTGCCAAGATCACAGGGACACTTCCCCACACTGTCAGAGCTCAGGAGAAGACGTGCACGCTaGTCTCCTTGTAGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: HVPLPRSQGHFPTLSELRRRRAR*SPCREA
Trigger: TGCCTCCCTACAAGGAGATCAGCGTGCACGTCTTCT...CCTGAGCTCTGACAGTGTGGGGAAGTGTCCCTGTGATCTTGGCAGTGGAACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337400.6
CDS-3UTR TCA 90 bp AAGGGGAGGGCAGTAGAGCTATTGGGACAAATGGACATCAGAATGAACAGGCTCGCTTTGGCCCTGCTCTaGGGTGAGCGCACCTCAACC +
Preference number: 4 (lower is better)
Translates to: KGRAVELLGQMDIRMNRLALALL*GERTST
Trigger: GGTTGAGGTGCGCTCACCTCAGAGCAGGGCCAAAGC...GAGCCTGTTCATTCTGATGTCCATTTGTCCCAATAGCTCTACTGCCCTCCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp AACCCCCATCAGCTGGGTAGGTGGGGAGCGGGAAGAATCCTGCCAGCAGAGAGTTCTGAATCTTGCAGCTaGGCTCACACTTCTCGTACT +
Preference number: 4 (lower is better)
Translates to: NPHQLGRWGAGRILPAESSESCS*AHTSRT
Trigger: AGTACGAGAAGTGTGAGCGCAGCTGCAAGATTCAGA...ACTCTCTGCTGGCAGGATTCTTCCCGCTCCCCACCTACCCAGCTGATGGGGGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000448077.6
CDS-3UTR GCA 90 bp CTCAGTCAGTGCCTTGCATGTTCCACTGCCAAGATCACAGGGACACTTCCCCACGTTTGCAGTCAGCCCTaGCACCAGCTTCCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: LSQCLACSTAKITGTLPHVCSQP*HQLPLL
Trigger: GAGAAGAGGAAGCTGGTGGCAGGGCTGACTGCAAAC...GTGGGGAAGTGTCCCTGTGATCTTGGCAGTGGAACATGCAAGGCACTGACTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337400.6
CDS-3UTR GCA 90 bp AAGGGGAGGGCAGTAGAGCTATTGGGACAAATGGACATCAGAATGAACAGGCTCCTGGCTCCCCTCGTTTaGAGTCAGCCCTGCCACCAG +
Preference number: 4 (lower is better)
Translates to: KGRAVELLGQMDIRMNRLLAPLV*SQPCHQ
Trigger: CTGGTGGCAGGGCTGACTGCAAACGAGGGGAGCCAG...GAGCCTGTTCATTCTGATGTCCATTTGTCCCAATAGCTCTACTGCCCTCCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp GAAGGGAGGTGCATGGAGCCTGCAGGTAAAGTGATTTCAGTGCTTATGTGTGTGCTGGCTCCCCTCGTTTaGAGTCAGCCCTGCCACCAG +
Preference number: 4 (lower is better)
Translates to: EGRCMEPAGKVISVLMCVLAPLV*SQPCHQ
Trigger: CTGGTGGCAGGGCTGACTGCAAACGAGGGGAGCCAG...CACACACATAAGCACTGAAATCACTTTACCTGCAGGCTCCATGCACCTCCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp GAAGGGAGGTGCATGGAGCCTGCAGGTAAAGTGATTTCAGTGCTTATGTGTGTGTCCAAGCTGGGAGAGTaGCGTCCAGCGGCCAGTGCA +
Preference number: 4 (lower is better)
Translates to: EGRCMEPAGKVISVLMCVSKLGE*RPAASA
Trigger: TGCACTGGCCGCTGGACGGCACTCTCCCAGCTTGGA...CACACACATAAGCACTGAAATCACTTTACCTGCAGGCTCCATGCACCTCCCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp AAGGGGAGGGCAGTAGAGCTATTGGGACAAATGGACATCAGAATGAACAGGCTCAGGCCTGGAGGGCTCTaGGCCGCTCAGACATGGCAT +
Preference number: 4 (lower is better)
Translates to: KGRAVELLGQMDIRMNRLRPGGL*AAQTWH
Trigger: ATGCCATGTCTGAGCGGCGCAGAGCCCTCCAGGCCT...GAGCCTGTTCATTCTGATGTCCATTTGTCCCAATAGCTCTACTGCCCTCCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp CTGCCAAGATCACAGGGACACTTCCCCACACTGTCAGAGCTCAGGCACAGTGCCCCTTGCATGTTCCACTaGCAAGATCACAGGGACACT +
Preference number: 4 (lower is better)
Translates to: LPRSQGHFPTLSELRHSAPCMFH*QDHRDT
Trigger: AGTGTCCCTGTGATCTTGGCAGTGGAACATGCAAGG...GGCACTGTGCCTGAGCTCTGACAGTGTGGGGAAGTGTCCCTGTGATCTTGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337400.6
CDS-3UTR CCA 90 bp AACCCCCATCAGCTGGGTAGGTGGGGAGCGGGAAGAATCCTGCCAGCAGAGAGTATTCCAGACCCTCGTTaGTGCATCTGTCTTCATCTG +
Preference number: 4 (lower is better)
Translates to: NPHQLGRWGAGRILPAESIPDPR*CICLHL
Trigger: CAGATGAAGACAGATGCACCAACGAGGGTCTGGAAT...ACTCTCTGCTGGCAGGATTCTTCCCGCTCCCCACCTACCCAGCTGATGGGGGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000311565.4
CDS-3UTR CCA 90 bp AAGGGGAGGGCAGTAGAGCTATTGGGACAAATGGACATCAGAATGAACAGGCTCCAGGTCGGCCACCTGTaGGTTGTACTGGCTCCCCTC +
Preference number: 4 (lower is better)
Translates to: KGRAVELLGQMDIRMNRLQVGHL*VVLAPL
Trigger: GAGGGGAGCCAGTACAACCCACAGGTGGCCGACCTG...GAGCCTGTTCATTCTGATGTCCATTTGTCCCAATAGCTCTACTGCCCTCCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp AAGGGGAGGGCAGTAGAGCTATTGGGACAAATGGACATCAGAATGAACAGGCTCAGGTGGGGGCCCACCTaGAGGGAACCCTGCCTACTT +
Preference number: 4 (lower is better)
Translates to: KGRAVELLGQMDIRMNRLRWGPT*REPCLL
Trigger: AAGTAGGCAGGGTTCCCTCCAGGTGGGCCCCCACCT...GAGCCTGTTCATTCTGATGTCCATTTGTCCCAATAGCTCTACTGCCCTCCCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp AAGGGGAGGGCAGTAGAGCTATTGGGACAAATGGACATCAGAATGAACAGGCTCGCAGGCCCCTCTCTCTaGGTTCTCACCTGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: KGRAVELLGQMDIRMNRLAGPSL*VLTCLR
Trigger: CCTGAGGCAGGTGAGAACCCAGAGAGAGGGGCCTGC...GAGCCTGTTCATTCTGATGTCCATTTGTCCCAATAGCTCTACTGCCCTCCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp GAAGGGAGGTGCATGGAGCCTGCAGGTAAAGTGATTTCAGTGCTTATGTGTGTGACTGGGAGCAGGTGCTaGGCTGACCCACCAGGACCT +
Preference number: 4 (lower is better)
Translates to: EGRCMEPAGKVISVLMCVTGSRC*ADPPGP
Trigger: AGGTCCTGGTGGGTCAGCCCAGCACCTGCTCCCAGT...CACACACATAAGCACTGAAATCACTTTACCTGCAGGCTCCATGCACCTCCCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR TCA 90 bp TGGGAGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGTCTTTTTGGTCATGTTaGAGTTTTTCAGGTAGGCAT +
Preference number: 4 (lower is better)
Translates to: WESAVQRPVQGAISNIGLSFWSC*SFSGRH
Trigger: ATGCCTACCTGAAAAACTTCAACATGACCAAAAAGA...CAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCTCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR TCA 90 bp CTACTTCCAAGCTGGGAGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCTCTTTTTGGTCATGTTaGAGTTTTTCAGGTAGGCAT +
Preference number: 4 (lower is better)
Translates to: LLPSWESAVQRPVQGAISSFWSC*SFSGRH
Trigger: ATGCCTACCTGAAAAACTTCAACATGACCAAAAAGA...GCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCTCCCAGCTTGGAAGTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR TCA 90 bp AAGGGGAGGGCAGTAGAGCTATTGGGACAAATGGACATCAGAATGAACAGGCTCGCAGGAACTCACGGGTaGCAAAGCCACTGCCGTTGG +
Preference number: 4 (lower is better)
Translates to: KGRAVELLGQMDIRMNRLAGTHG*QSHCRW
Trigger: CCAACGGCAGTGGCTTTGTCACCCGTGAGTTCCTGC...GAGCCTGTTCATTCTGATGTCCATTTGTCCCAATAGCTCTACTGCCCTCCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR TCA 90 bp GAAGGGAGGTGCATGGAGCCTGCAGGTAAAGTGATTTCAGTGCTTATGTGTGTGGCAGGAACTCACGGGTaGCAAAGCCACTGCCGTTGG +
Preference number: 4 (lower is better)
Translates to: EGRCMEPAGKVISVLMCVAGTHG*QSHCRW
Trigger: CCAACGGCAGTGGCTTTGTCACCCGTGAGTTCCTGC...CACACACATAAGCACTGAAATCACTTTACCTGCAGGCTCCATGCACCTCCCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR TCA 90 bp AACCCCCATCAGCTGGGTAGGTGGGGAGCGGGAAGAATCCTGCCAGCAGAGAGTAGCCTGCAGGTAAAGTaGTTTCAGTGCTTATGTGTG +
Preference number: 4 (lower is better)
Translates to: NPHQLGRWGAGRILPAESSLQVK*FQCLCV
Trigger: CACACATAAGCACTGAAATCACTTTACCTGCAGGCT...ACTCTCTGCTGGCAGGATTCTTCCCGCTCCCCACCTACCCAGCTGATGGGGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR TCA 90 bp AGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAACCAGTGTGAAGAGATTGTTCAGACACTaGGAAGAGCTGTATCCTCAG +
Preference number: 4 (lower is better)
Translates to: SGQCRGPSATLAWQTSVKRLFRH*EELYPQ
Trigger: CTGAGGATACAGCTCTTCTCAGTGTCTGAACAATCT...CTTCACACTGGTTTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR TCA 90 bp CGTGGGACTCTGCTGCTCCAGGCCGGGTGCTCAAGGGCTGGTCAATGGAAAAGTAGATTGTTCAGACACTaGGAAGAGCTGTATCCTCAG +
Preference number: 4 (lower is better)
Translates to: RGTLLLQAGCSRAGQWKSRLFRH*EELYPQ
Trigger: CTGAGGATACAGCTCTTCTCAGTGTCTGAACAATCT...ACTTTTCCATTGACCAGCCCTTGAGCACCCGGCCTGGAGCAGCAGAGTCCCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp CTGCCAAGATCACAGGGACACTTCCCCACACTGTCAGAGCTCAGGCACAGTGCCTCCTGTAGAGATCACTaGTCCACGGGCTTCAGTTTT +
Preference number: 4 (lower is better)
Translates to: LPRSQGHFPTLSELRHSASCRDH*STGFSF
Trigger: AAAACTGAAGCCCGTGGAGCAGTGATCTCTACAGGA...GGCACTGTGCCTGAGCTCTGACAGTGTGGGGAAGTGTCCCTGTGATCTTGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337400.6
CDS-3UTR GCA 90 bp AAGGGGAGGGCAGTAGAGCTATTGGGACAAATGGACATCAGAATGAACAGGCTCGCTTCCTCCTGTGGCTaGTCCATGGCTGATCTCCCC +
Preference number: 4 (lower is better)
Translates to: KGRAVELLGQMDIRMNRLASSCG*SMADLP
Trigger: GGGGAGATCAGCCATGGAGCAGCCACAGGAGGAAGC...GAGCCTGTTCATTCTGATGTCCATTTGTCCCAATAGCTCTACTGCCCTCCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
CDS-3UTR GCA 90 bp AGTGCCTTGCATGTTCCACTGCCAAGATCACAGGGACACTTCCCCACACTGTCACTGGAAGGAAGTGCATaGTGTGGTCCCCCATTGAGC +
Preference number: 4 (lower is better)
Translates to: SALHVPLPRSQGHFPTLSLEGSA*CGPPLS
Trigger: GCTCAATGGGGGACCACAGCATGCACTTCCTTCCAG...TGACAGTGTGGGGAAGTGTCCCTGTGATCTTGGCAGTGGAACATGCAAGGCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337400.6
CDS-3UTR GCA 90 bp CGTGGGACTCTGCTGCTCCAGGCCGGGTGCTCAAGGGCTGGTCAATGGAAAAGTTCTTCTTCTGAATCTTaGAGCTGCGCTCACACTTCT +
Preference number: 4 (lower is better)
Translates to: RGTLLLQAGCSRAGQWKSSSSES*SCAHTS
Trigger: AGAAGTGTGAGCGCAGCTGCAAGATTCAGAAGAAGA...ACTTTTCCATTGACCAGCCCTTGAGCACCCGGCCTGGAGCAGCAGAGTCCCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000448077.6
CDS-3UTR GCA 90 bp AGCCACCACGTCTGGCTTAGTCTTTTTCCTGTCTCCACCTCTATCTACGTACATCTGGCTCCCCTCGTTTaGAGTCAGCCCTGCCACCAG +
Preference number: 4 (lower is better)
Translates to: SHHVWLSLFPVSTSIYVHLAPLV*SQPCHQ
Trigger: CTGGTGGCAGGGCTGACTGCAAACGAGGGGAGCCAG...ATGTACGTAGATAGAGGTGGAGACAGGAAAAAGACTAAGCCAGACGTGGTGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337400.6
CDS-3UTR GCA 90 bp AGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAACCAGTGTGAAGATGGCTCAAGTCTTTTaGTCTGAAGACAGGAGACAG +
Preference number: 4 (lower is better)
Translates to: SGQCRGPSATLAWQTSVKMAQVF*SEDRRQ
Trigger: CTGTCTCCTGTCTTCAGAGCAAAAGACTTGAGCCAT...CTTCACACTGGTTTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp GAAGGGAGGTGCATGGAGCCTGCAGGTAAAGTGATTTCAGTGCTTATGTGTGTGGCTGTGCTTTGGCCCTaGTCTGAGGTGAGCGCACCT +
Preference number: 4 (lower is better)
Translates to: EGRCMEPAGKVISVLMCVAVLWP*SEVSAP
Trigger: AGGTGCGCTCACCTCAGAGCAGGGCCAAAGCACAGC...CACACACATAAGCACTGAAATCACTTTACCTGCAGGCTCCATGCACCTCCCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp AGTGCCTTGCATGTTCCACTGCCAAGATCACAGGGACACTTCCCCACACTGTCATCACCCAGGCTGGAGTaGAGTGGTGGGATTTTGGCT +
Preference number: 4 (lower is better)
Translates to: SALHVPLPRSQGHFPTLSSPRLE*SGGILA
Trigger: AGCCAAAATCCCACCACTGCACTCCAGCCTGGGTGA...TGACAGTGTGGGGAAGTGTCCCTGTGATCTTGGCAGTGGAACATGCAAGGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337400.6
CDS-3UTR CCA 90 bp AAGGGGAGGGCAGTAGAGCTATTGGGACAAATGGACATCAGAATGAACAGGCTCCAGCCCATCTGCAGTTaGTCCAGCAGTGAGGGTGGC +
Preference number: 4 (lower is better)
Translates to: KGRAVELLGQMDIRMNRLQPICS*SSSEGG
Trigger: GCCACCCTCACTGCTGGACCAACTGCAGATGGGCTG...GAGCCTGTTCATTCTGATGTCCATTTGTCCCAATAGCTCTACTGCCCTCCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000448077.6
CDS-3UTR TCA 90 bp GAAGGGAGGTGCATGGAGCCTGCAGGTAAAGTGATTTCAGTGCTTATGTGTGTGGGCATCGTCTGGGTCTaGACGCAGATGGACCTCTAC +
Preference number: 4 (lower is better)
Translates to: EGRCMEPAGKVISVLMCVGIVWV*TQMDLY
Trigger: GTAGAGGTCCATCTGCGTTCAGACCCAGACGATGCC...CACACACATAAGCACTGAAATCACTTTACCTGCAGGCTCCATGCACCTCCCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
CDS-3UTR GCA 90 bp CATGCTCAGTCAGTGCCTTGCATGTTCCACTGCCAAGATCACAGGGACACTTCCCGTACTCCAGCTTCATaGGGATCGTACGACGGAAGA +
Preference number: 4 (lower is better)
Translates to: HAQSVPCMFHCQDHRDTSRTPAS*GSYDGR
Trigger: TCTTCCGTCGTACGATCCGCATGAAGCTGGAGTACG...GGAAGTGTCCCTGTGATCTTGGCAGTGGAACATGCAAGGCACTGACTGAGCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337400.6
CDS-3UTR GCA 90 bp AAGGGGAGGGCAGTAGAGCTATTGGGACAAATGGACATCAGAATGAACAGGCTCTGCTCGGTGACCAGTTaGCGCAGGTCAGCCATCTTC +
Preference number: 4 (lower is better)
Translates to: KGRAVELLGQMDIRMNRLCSVTS*RRSAIF
Trigger: GAAGATGGCTGACCTGCGGCAACTGGTCACCGAGCA...GAGCCTGTTCATTCTGATGTCCATTTGTCCCAATAGCTCTACTGCCCTCCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp CATGTTCCACTGCCAAGATCACAGGGACACTTCCCCACACTGTCAGAGCTCAGGGCTCAGTCAGTGCCTTaGATGTTCCACTGCCAAGAT +
Preference number: 4 (lower is better)
Translates to: HVPLPRSQGHFPTLSELRAQSVP*MFHCQD
Trigger: ATCTTGGCAGTGGAACATGCAAGGCACTGACTGAGC...CCTGAGCTCTGACAGTGTGGGGAAGTGTCCCTGTGATCTTGGCAGTGGAACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337400.6
CDS-3UTR CCA 90 bp AGTGCCTTGCATGTTCCACTGCCAAGATCACAGGGACACTTCCCCACACTGTCATGGACCTCTACAGGGTaGTTCCCATCAGCCTTGAAG +
Preference number: 4 (lower is better)
Translates to: SALHVPLPRSQGHFPTLSWTSTG*FPSALK
Trigger: CTTCAAGGCTGATGGGAACCACCCTGTAGAGGTCCA...TGACAGTGTGGGGAAGTGTCCCTGTGATCTTGGCAGTGGAACATGCAAGGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337400.6
CDS-3UTR CCA 90 bp AGTGCCTTGCATGTTCCACTGCCAAGATCACAGGGACACTTCCCCACACTGTCATGGAAGCGGCAGTACTaGCACTTGTTGCGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: SALHVPLPRSQGHFPTLSWKRQY*HLLRFF
Trigger: GAAGAACCGCAACAAGTGCCAGTACTGCCGCTTCCA...TGACAGTGTGGGGAAGTGTCCCTGTGATCTTGGCAGTGGAACATGCAAGGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337400.6
CDS-3UTR CCA 90 bp AGTGCCTTGCATGTTCCACTGCCAAGATCACAGGGACACTTCCCCACACTGTCAAATGTCTCGATGTCGTaGATCACAAAGGGCGCCGTG +
Preference number: 4 (lower is better)
Translates to: SALHVPLPRSQGHFPTLSNVSMS*ITKGAV
Trigger: CACGGCGCCCTTTGTGATCCACGACATCGAGACATT...TGACAGTGTGGGGAAGTGTCCCTGTGATCTTGGCAGTGGAACATGCAAGGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337400.6
CDS-3UTR CCA 90 bp TACGTACATAATGAGATGGAGCTGATCCTGCATGCTCAGTCAGTGCCTTGCATGCAAAGCCACTGCCGTTaGCTACCAGCAGCCCGTCCT +
Preference number: 4 (lower is better)
Translates to: YVHNEMELILHAQSVPCMQSHCR*LPAARP
Trigger: AGGACGGGCTGCTGGTAGCCAACGGCAGTGGCTTTG...CATGCAAGGCACTGACTGAGCATGCAGGATCAGCTCCATCTCATTATGTACGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337400.6
CDS-3UTR CCA 90 bp GAAGGGAGGTGCATGGAGCCTGCAGGTAAAGTGATTTCAGTGCTTATGTGTGTGGATAGCCTCCACCCGTaGAACGTTCATGAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: EGRCMEPAGKVISVLMCVDSLHP*NVHEAW
Trigger: CCAGGCCTCATGAACGTTCCACGGGTGGAGGCTATC...CACACACATAAGCACTGAAATCACTTTACCTGCAGGCTCCATGCACCTCCCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp AAGGGGAGGGCAGTAGAGCTATTGGGACAAATGGACATCAGAATGAACAGGCTCGGGCATCAGGGTGGTTaGCCTGCAGGTGGAATTCGA +
Preference number: 4 (lower is better)
Translates to: KGRAVELLGQMDIRMNRLGHQGG*PAGGIR
Trigger: TCGAATTCCACCTGCAGGCCAACCACCCTGATGCCC...GAGCCTGTTCATTCTGATGTCCATTTGTCCCAATAGCTCTACTGCCCTCCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp GAAGGGAGGTGCATGGAGCCTGCAGGTAAAGTGATTTCAGTGCTTATGTGTGTGTTGGGGAAGAGGTACTaGGCATCAGGGTGGTTGGCC +
Preference number: 4 (lower is better)
Translates to: EGRCMEPAGKVISVLMCVLGKRY*ASGWLA
Trigger: GGCCAACCACCCTGATGCCCAGTACCTCTTCCCCAA...CACACACATAAGCACTGAAATCACTTTACCTGCAGGCTCCATGCACCTCCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp GAAGGGAGGTGCATGGAGCCTGCAGGTAAAGTGATTTCAGTGCTTATGTGTGTGGGGCCTGAACTCCCGTaGAGCCAGCTAGAGAAAGGA +
Preference number: 4 (lower is better)
Translates to: EGRCMEPAGKVISVLMCVGPELP*SQLEKG
Trigger: TCCTTTCTCTAGCTGGCTCCACGGGAGTTCAGGCCC...CACACACATAAGCACTGAAATCACTTTACCTGCAGGCTCCATGCACCTCCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR TCA 90 bp CACGTCTGGCTTAGTCTTTTTCCTGTCTCCACCTCTATCTACGTACATAATGAGGCTGTGGTCCCCCATTaGGCTCTGGGGCTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: HVWLSLFPVSTSIYVHNEAVVPH*ALGLLL
Trigger: CAGAAGGAGCCCCAGAGCTCAATGGGGGACCACAGC...CTCATTATGTACGTAGATAGAGGTGGAGACAGGAAAAAGACTAAGCCAGACGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000337400.6
CDS-3UTR TCA 90 bp GAAGGGAGGTGCATGGAGCCTGCAGGTAAAGTGATTTCAGTGCTTATGTGTGTGAGAAGACGTGCACGCTaGTCTCCTTGTAGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: EGRCMEPAGKVISVLMCVRRRAR*SPCREA
Trigger: TGCCTCCCTACAAGGAGATCAGCGTGCACGTCTTCT...CACACACATAAGCACTGAAATCACTTTACCTGCAGGCTCCATGCACCTCCCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR TCA 90 bp GTGGGTGGCCTCAGCATCGGAGGGGCAATGACAGTCTTGGGGAGGCATCTGGCTGTTCTATGCTGCTGGTaGAATAATACAAAACATCTC +
Preference number: 4 (lower is better)
Translates to: VGGLSIGGAMTVLGRHLAVLCCW*NNTKHL
Trigger: GAGATGTTTTGTATTATTTCACCAGCAGCATAGAAC...AGCCAGATGCCTCCCCAAGACTGTCATTGCCCCTCCGATGCTGAGGCCACCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp AAGGGGAGGGCAGTAGAGCTATTGGGACAAATGGACATCAGAATGAACAGGCTCCTCTGGGGCTCCTTCTaGCTCTGCCACTTCCTCTTT +
Preference number: 4 (lower is better)
Translates to: KGRAVELLGQMDIRMNRLLWGSF*LCHFLF
Trigger: AAAGAGGAAGTGGCAGAGGCAGAAGGAGCCCCAGAG...GAGCCTGTTCATTCTGATGTCCATTTGTCCCAATAGCTCTACTGCCCTCCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
CDS-3UTR GCA 90 bp AGCCACCACGTCTGGCTTAGTCTTTTTCCTGTCTCCACCTCTATCTACGTACATCCGTCACAGCCCATCTaGAGTTGGTCCAGCAGTGAG +
Preference number: 4 (lower is better)
Translates to: SHHVWLSLFPVSTSIYVHPSQPI*SWSSSE
Trigger: CTCACTGCTGGACCAACTGCAGATGGGCTGTGACGG...ATGTACGTAGATAGAGGTGGAGACAGGAAAAAGACTAAGCCAGACGTGGTGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337400.6
CDS-3UTR GCA 90 bp AAGGGGAGGGCAGTAGAGCTATTGGGACAAATGGACATCAGAATGAACAGGCTCGTTTGCAGTCAGCCCTaGCACCAGCTTCCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: KGRAVELLGQMDIRMNRLVCSQP*HQLPLL
Trigger: GAGAAGAGGAAGCTGGTGGCAGGGCTGACTGCAAAC...GAGCCTGTTCATTCTGATGTCCATTTGTCCCAATAGCTCTACTGCCCTCCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp AGCCACCACGTCTGGCTTAGTCTTTTTCCTGTCTCCACCTCTATCTACGTACATCGGTCTCCACTGTGGTaGACTGGCAGCGGTAGAAGA +
Preference number: 4 (lower is better)
Translates to: SHHVWLSLFPVSTSIYVHRSPLW*TGSGRR
Trigger: TCTTCTACCGCTGCCAGTGCACCACAGTGGAGACCG...ATGTACGTAGATAGAGGTGGAGACAGGAAAAAGACTAAGCCAGACGTGGTGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337400.6
CDS-3UTR GCA 90 bp GAAGGGAGGTGCATGGAGCCTGCAGGTAAAGTGATTTCAGTGCTTATGTGTGTGGCGAAGATGGCCTCGTaGACGCCATACTTGAGAAGG +
Preference number: 4 (lower is better)
Translates to: EGRCMEPAGKVISVLMCVAKMAS*TPYLRR
Trigger: CCTTCTCAAGTATGGCGTGCACGAGGCCATCTTCGC...CACACACATAAGCACTGAAATCACTTTACCTGCAGGCTCCATGCACCTCCCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp GAAGGGAGGTGCATGGAGCCTGCAGGTAAAGTGATTTCAGTGCTTATGTGTGTGGGGCAGAATTGGGTGTaGTGCTTCCTCCAACCACCA +
Preference number: 4 (lower is better)
Translates to: EGRCMEPAGKVISVLMCVGQNWV*CFLQPP
Trigger: TGGTGGTTGGAGGAAGCAGCACACCCAATTCTGCCC...CACACACATAAGCACTGAAATCACTTTACCTGCAGGCTCCATGCACCTCCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp AAGGGGAGGGCAGTAGAGCTATTGGGACAAATGGACATCAGAATGAACAGGCTCGTTCTCCTACCTCTGTaGTCTGAGACTCCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: KGRAVELLGQMDIRMNRLVLLPL*SETPAS
Trigger: GCTGGCTGGAGTCTCAGAGCACAGAGGTAGGAGAAC...GAGCCTGTTCATTCTGATGTCCATTTGTCCCAATAGCTCTACTGCCCTCCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp TCTGGCTTAGTCTTTTTCCTGTCTCCACCTCTATCTACGTACATAATGAGATGGCCTGTGGCTGCTCCATaGCTGATCTCCCCTCGGCGC +
Preference number: 4 (lower is better)
Translates to: SGLVFFLSPPLSTYIMRWPVAAP*LISPRR
Trigger: GCGCCGAGGGGAGATCAGCCATGGAGCAGCCACAGG...CCATCTCATTATGTACGTAGATAGAGGTGGAGACAGGAAAAAGACTAAGCCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337400.6
CDS-3UTR CCA 90 bp GAAGGGAGGTGCATGGAGCCTGCAGGTAAAGTGATTTCAGTGCTTATGTGTGTGAGGAAGTGCATGCTGTaGTCCCCCATTGAGCTCTGG +
Preference number: 4 (lower is better)
Translates to: EGRCMEPAGKVISVLMCVRKCML*SPIELW
Trigger: CCAGAGCTCAATGGGGGACCACAGCATGCACTTCCT...CACACACATAAGCACTGAAATCACTTTACCTGCAGGCTCCATGCACCTCCCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
CDS-3UTR CCA 90 bp ACCTCTATCTACGTACATAATGAGATGGAGCTGATCCTGCATGCTCAGTCAGTGCAGCCCATCTGCAGTTaGTCCAGCAGTGAGGGTGGC +
Preference number: 4 (lower is better)
Translates to: TSIYVHNEMELILHAQSVQPICS*SSSEGG
Trigger: GCCACCCTCACTGCTGGACCAACTGCAGATGGGCTG...CACTGACTGAGCATGCAGGATCAGCTCCATCTCATTATGTACGTAGATAGAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337400.6
CDS-3UTR CCA 90 bp AAGGGGAGGGCAGTAGAGCTATTGGGACAAATGGACATCAGAATGAACAGGCTCTACTGGGCATCAGGGTaGTTGGCCTGCAGGTGGAAT +
Preference number: 4 (lower is better)
Translates to: KGRAVELLGQMDIRMNRLYWASG*LACRWN
Trigger: ATTCCACCTGCAGGCCAACCACCCTGATGCCCAGTA...GAGCCTGTTCATTCTGATGTCCATTTGTCCCAATAGCTCTACTGCCCTCCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp AAGGGGAGGGCAGTAGAGCTATTGGGACAAATGGACATCAGAATGAACAGGCTCTGGACCTCTACAGGGTaGTTCCCATCAGCCTCGTTG +
Preference number: 4 (lower is better)
Translates to: KGRAVELLGQMDIRMNRLWTSTG*FPSASL
Trigger: CAACGAGGCTGATGGGAACCACCCTGTAGAGGTCCA...GAGCCTGTTCATTCTGATGTCCATTTGTCCCAATAGCTCTACTGCCCTCCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360694.8
ENST00000418635.6
CDS-3UTR TCA 90 bp AGCCACCACGTCTGGCTTAGTCTTTTTCCTGTCTCCACCTCTATCTACGTACATGCAGAAGCCACTGTGTaGGTATCACGTGCATGCCCA +
Preference number: 4 (lower is better)
Translates to: SHHVWLSLFPVSTSIYVHAEATV*VSRACP
Trigger: TGGGCATGCACGTGATACTCACACAGTGGCTTCTGC...ATGTACGTAGATAGAGGTGGAGACAGGAAAAAGACTAAGCCAGACGTGGTGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337400.6
CDS-3UTR TCA 90 bp CGTGGGACTCTGCTGCTCCAGGCCGGGTGCTCAAGGGCTGGTCAATGGAAAAGTTCTTTTTGGTCATGTTaGAGTTTTTCAGGTAGGCAT +
Preference number: 4 (lower is better)
Translates to: RGTLLLQAGCSRAGQWKSSFWSC*SFSGRH
Trigger: ATGCCTACCTGAAAAACTTCAACATGACCAAAAAGA...ACTTTTCCATTGACCAGCCCTTGAGCACCCGGCCTGGAGCAGCAGAGTCCCACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR TCA 90 bp AGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAACCAGTGTGAAGGTTCTATGCTGCTGGTaGAATAATACAAAACATCTC +
Preference number: 4 (lower is better)
Translates to: SGQCRGPSATLAWQTSVKVLCCW*NNTKHL
Trigger: GAGATGTTTTGTATTATTTCACCAGCAGCATAGAAC...CTTCACACTGGTTTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR TCA 90 bp AGTGCCTTGCATGTTCCACTGCCAAGATCACAGGGACACTTCCCCACACTGTCAATAATGAGATGGAGCTaGTCCTGCATGCTCAGTCAG +
Preference number: 4 (lower is better)
Translates to: SALHVPLPRSQGHFPTLSIMRWS*SCMLSQ
Trigger: CTGACTGAGCATGCAGGATCAGCTCCATCTCATTAT...TGACAGTGTGGGGAAGTGTCCCTGTGATCTTGGCAGTGGAACATGCAAGGCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337400.6
CDS-3UTR GCA 90 bp AAGGGGAGGGCAGTAGAGCTATTGGGACAAATGGACATCAGAATGAACAGGCTCCGTACTCCAGCTTCATaGGGATCGTACGACGGAAGA +
Preference number: 4 (lower is better)
Translates to: KGRAVELLGQMDIRMNRLRTPAS*GSYDGR
Trigger: TCTTCCGTCGTACGATCCGCATGAAGCTGGAGTACG...GAGCCTGTTCATTCTGATGTCCATTTGTCCCAATAGCTCTACTGCCCTCCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000448077.6
CDS-3UTR GCA 90 bp AGCCACCACGTCTGGCTTAGTCTTTTTCCTGTCTCCACCTCTATCTACGTACATCACCAGCCCCTTCTCTaGCTGCCACAATGTCTCGAT +
Preference number: 4 (lower is better)
Translates to: SHHVWLSLFPVSTSIYVHHQPLL*LPQCLD
Trigger: ATCGAGACATTGTGGCAGGCAGAGAAGGGGCTGGTG...ATGTACGTAGATAGAGGTGGAGACAGGAAAAAGACTAAGCCAGACGTGGTGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337400.6
CDS-3UTR CCA 90 bp AGTGCCTTGCATGTTCCACTGCCAAGATCACAGGGACACTTCCCCACACTGTCAATTCCAGACCCTCGTTaGTGCATCTGTCTTCATCTG +
Preference number: 4 (lower is better)
Translates to: SALHVPLPRSQGHFPTLSIPDPR*CICLHL
Trigger: CAGATGAAGACAGATGCACCAACGAGGGTCTGGAAT...TGACAGTGTGGGGAAGTGTCCCTGTGATCTTGGCAGTGGAACATGCAAGGCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337400.6
CDS-3UTR CCA 90 bp AAGGGGAGGGCAGTAGAGCTATTGGGACAAATGGACATCAGAATGAACAGGCTCTGGACCTCTACAGGGTaGTTCCCATCAGCCTTGAAG +
Preference number: 4 (lower is better)
Translates to: KGRAVELLGQMDIRMNRLWTSTG*FPSALK
Trigger: CTTCAAGGCTGATGGGAACCACCCTGTAGAGGTCCA...GAGCCTGTTCATTCTGATGTCCATTTGTCCCAATAGCTCTACTGCCCTCCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311565.4
CDS-3UTR CCA 90 bp AAGGGGAGGGCAGTAGAGCTATTGGGACAAATGGACATCAGAATGAACAGGCTCGGTCTGTGTAGCTGCTaGAAGGAAGTGCATGCTGTG +
Preference number: 4 (lower is better)
Translates to: KGRAVELLGQMDIRMNRLGLCSC*KEVHAV
Trigger: CACAGCATGCACTTCCTTCCAGCAGCTACACAGACC...GAGCCTGTTCATTCTGATGTCCATTTGTCCCAATAGCTCTACTGCCCTCCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311565.4
ENST00000360694.8
CDS-3UTR CCA 90 bp GAAGGGAGGTGCATGGAGCCTGCAGGTAAAGTGATTTCAGTGCTTATGTGTGTGGGTCTGTGTAGCTGCTaGAAGGAAGTGCATGCTGTG +
Preference number: 4 (lower is better)
Translates to: EGRCMEPAGKVISVLMCVGLCSC*KEVHAV
Trigger: CACAGCATGCACTTCCTTCCAGCAGCTACACAGACC...CACACACATAAGCACTGAAATCACTTTACCTGCAGGCTCCATGCACCTCCCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311565.4
ENST00000360694.8
CDS-3UTR CCA 90 bp GAAGGGAGGTGCATGGAGCCTGCAGGTAAAGTGATTTCAGTGCTTATGTGTGTGTGGAAGCGGCAGTACTaGCACTTGTTGCGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: EGRCMEPAGKVISVLMCVWKRQY*HLLRFF
Trigger: GAAGAACCGCAACAAGTGCCAGTACTGCCGCTTCCA...CACACACATAAGCACTGAAATCACTTTACCTGCAGGCTCCATGCACCTCCCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000448077.6
CDS-3UTR GCA 90 bp AGCCACCACGTCTGGCTTAGTCTTTTTCCTGTCTCCACCTCTATCTACGTACATGACGGAAGAAGCCCTTaGACCCCTCACATGCATGAA +
Preference number: 4 (lower is better)
Translates to: SHHVWLSLFPVSTSIYVHDGRSP*TPHMHE
Trigger: TTCATGCATGTGAGGGGTGCAAGGGCTTCTTCCGTC...ATGTACGTAGATAGAGGTGGAGACAGGAAAAAGACTAAGCCAGACGTGGTGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337400.6
CDS-3UTR GCA 90 bp GAAGGGAGGTGCATGGAGCCTGCAGGTAAAGTGATTTCAGTGCTTATGTGTGTGCCTTCTCTTGAGACTTaGTCCTCTTCAGTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: EGRCMEPAGKVISVLMCVPSLET*SSSVRW
Trigger: CCACCTCACTGAAGAGGAGCAAGTCTCAAGAGAAGG...CACACACATAAGCACTGAAATCACTTTACCTGCAGGCTCCATGCACCTCCCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp AGCCACCACGTCTGGCTTAGTCTTTTTCCTGTCTCCACCTCTATCTACGTACATTGCATGCTCAGTCAGTaGCTTGCATGTTCCACTGCC +
Preference number: 4 (lower is better)
Translates to: SHHVWLSLFPVSTSIYVHCMLSQ*LACSTA
Trigger: GGCAGTGGAACATGCAAGGCACTGACTGAGCATGCA...ATGTACGTAGATAGAGGTGGAGACAGGAAAAAGACTAAGCCAGACGTGGTGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337400.6
CDS-3UTR CCA 90 bp AAGGGGAGGGCAGTAGAGCTATTGGGACAAATGGACATCAGAATGAACAGGCTCCATTGTAGATGTGCTTaGAGAAGGCCTTCAGGTCGG +
Preference number: 4 (lower is better)
Translates to: KGRAVELLGQMDIRMNRLHCRCA*RRPSGR
Trigger: CCGACCTGAAGGCCTTCTCCAAGCACATCTACAATG...GAGCCTGTTCATTCTGATGTCCATTTGTCCCAATAGCTCTACTGCCCTCCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp GAAGGGAGGTGCATGGAGCCTGCAGGTAAAGTGATTTCAGTGCTTATGTGTGTGTTGAGAAGGGTAACCTaGTCGTTGAGGAAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: EGRCMEPAGKVISVLMCVLRRVT*SLRKRL
Trigger: CAGCCTCTTCCTCAACGACCAGGTTACCCTTCTCAA...CACACACATAAGCACTGAAATCACTTTACCTGCAGGCTCCATGCACCTCCCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp AATATACATTTCAATTTTGGAGATTGTTCAGACACTGAGAAGAGCTGTATCCTCGGGCAGTGGGAGTGCTaGCGGAAGGCCTGCCCCGAG +
Preference number: 4 (lower is better)
Translates to: NIHFNFGDCSDTEKSCILGQWEC*RKACPE
Trigger: CTCGGGGCAGGCCTTCCGCCAGCACTCCCACTGCCC...GAGGATACAGCTCTTCTCAGTGTCTGAACAATCTCCAAAATTGAAATGTATATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR TCA 90 bp AATATACATTTCAATTTTGGAGATTGTTCAGACACTGAGAAGAGCTGTATCCTCGAGCTCTCCCTGGCCTaGCCCCAGGACTCAGACCCC +
Preference number: 4 (lower is better)
Translates to: NIHFNFGDCSDTEKSCILELSLA*PQDSDP
Trigger: GGGGTCTGAGTCCTGGGGTCAGGCCAGGGAGAGCTC...GAGGATACAGCTCTTCTCAGTGTCTGAACAATCTCCAAAATTGAAATGTATATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp CACGTCTGGCTTAGTCTTTTTCCTGTCTCCACCTCTATCTACGTACATAATGAGGCTGCTGGAAGGAAGTaGATGCTGTGGTCCCCCATT +
Preference number: 4 (lower is better)
Translates to: HVWLSLFPVSTSIYVHNEAAGRK*MLWSPI
Trigger: AATGGGGGACCACAGCATGCACTTCCTTCCAGCAGC...CTCATTATGTACGTAGATAGAGGTGGAGACAGGAAAAAGACTAAGCCAGACGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000337400.6
CDS-3UTR CCA 90 bp AGCCACCACGTCTGGCTTAGTCTTTTTCCTGTCTCCACCTCTATCTACGTACATCATTGTAGATGTGCTTaGAGAAGGCCTTCAGGTCGG +
Preference number: 4 (lower is better)
Translates to: SHHVWLSLFPVSTSIYVHHCRCA*RRPSGR
Trigger: CCGACCTGAAGGCCTTCTCCAAGCACATCTACAATG...ATGTACGTAGATAGAGGTGGAGACAGGAAAAAGACTAAGCCAGACGTGGTGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337400.6
CDS-3UTR CCA 90 bp CACGTCTGGCTTAGTCTTTTTCCTGTCTCCACCTCTATCTACGTACATAATGAGGCAGTGGTGGGATTTTaGCTCACTGCAACCTCCACC +
Preference number: 4 (lower is better)
Translates to: HVWLSLFPVSTSIYVHNEAVVGF*LTATST
Trigger: GGTGGAGGTTGCAGTGAGCCAAAATCCCACCACTGC...CTCATTATGTACGTAGATAGAGGTGGAGACAGGAAAAAGACTAAGCCAGACGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337400.6
CDS-3UTR TCA 90 bp AATATACATTTCAATTTTGGAGATTGTTCAGACACTGAGAAGAGCTGTATCCTCGGCTGGCTTTGCCGGTaGGGATGCTGCGGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: NIHFNFGDCSDTEKSCILGWLCR*GCCGPS
Trigger: AGAAGGCCCGCAGCATCCTCACCGGCAAAGCCAGCC...GAGGATACAGCTCTTCTCAGTGTCTGAACAATCTCCAAAATTGAAATGTATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR TCA 90 bp AATATACATTTCAATTTTGGAGATTGTTCAGACACTGAGAAGAGCTGTATCCTCCCCGTGGAACGTTCATaGGGCCTGGCCGGTCTCCAC +
Preference number: 4 (lower is better)
Translates to: NIHFNFGDCSDTEKSCILPVERS*GLAGLH
Trigger: GTGGAGACCGGCCAGGCCTCATGAACGTTCCACGGG...GAGGATACAGCTCTTCTCAGTGTCTGAACAATCTCCAAAATTGAAATGTATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR TCA 90 bp AATATACATTTCAATTTTGGAGATTGTTCAGACACTGAGAAGAGCTGTATCCTCTCTGGGCGTGCTCGGTaGCCAGTTGCCGCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: NIHFNFGDCSDTEKSCILSGRAR*PVAAGQ
Trigger: CTGACCTGCGGCAACTGGTCACCGAGCACGCCCAGA...GAGGATACAGCTCTTCTCAGTGTCTGAACAATCTCCAAAATTGAAATGTATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR TCA 90 bp AAGGGGAGGGCAGTAGAGCTATTGGGACAAATGGACATCAGAATGAACAGGCTCAGCCTGCAGGTAAAGTaGTTTCAGTGCTTATGTGTG +
Preference number: 4 (lower is better)
Translates to: KGRAVELLGQMDIRMNRLSLQVK*FQCLCV
Trigger: CACACATAAGCACTGAAATCACTTTACCTGCAGGCT...GAGCCTGTTCATTCTGATGTCCATTTGTCCCAATAGCTCTACTGCCCTCCCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR TCA 90 bp GAAGGGAGGTGCATGGAGCCTGCAGGTAAAGTGATTTCAGTGCTTATGTGTGTGAGCCTGCAGGTAAAGTaGTTTCAGTGCTTATGTGTG +
Preference number: 4 (lower is better)
Translates to: EGRCMEPAGKVISVLMCVSLQVK*FQCLCV
Trigger: CACACATAAGCACTGAAATCACTTTACCTGCAGGCT...CACACACATAAGCACTGAAATCACTTTACCTGCAGGCTCCATGCACCTCCCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR TCA 90 bp AATATACATTTCAATTTTGGAGATTGTTCAGACACTGAGAAGAGCTGTATCCTCGGTGGCCAGCTGGGCTaGGTAAAGGGGAAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: NIHFNFGDCSDTEKSCILGGQLG*VKGKGR
Trigger: CCTCCCCTTCCCCTTTACTCAGCCCAGCTGGCCACC...GAGGATACAGCTCTTCTCAGTGTCTGAACAATCTCCAAAATTGAAATGTATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp AATATACATTTCAATTTTGGAGATTGTTCAGACACTGAGAAGAGCTGTATCCTCCCGTCCAGCGGCCAGTaGAGGGGGCCATCAGCAACA +
Preference number: 4 (lower is better)
Translates to: NIHFNFGDCSDTEKSCILPSSGQ*RGPSAT
Trigger: TGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGG...GAGGATACAGCTCTTCTCAGTGTCTGAACAATCTCCAAAATTGAAATGTATATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp AATATACATTTCAATTTTGGAGATTGTTCAGACACTGAGAAGAGCTGTATCCTCCGTAGGGGCAGGGGCTaGGCACTTCCACCCAGAGTC +
Preference number: 4 (lower is better)
Translates to: NIHFNFGDCSDTEKSCILRRGRG*ALPPRV
Trigger: GACTCTGGGTGGAAGTGCCCAGCCCCTGCCCCTACG...GAGGATACAGCTCTTCTCAGTGTCTGAACAATCTCCAAAATTGAAATGTATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR TCA 90 bp TCTGGCTTAGTCTTTTTCCTGTCTCCACCTCTATCTACGTACATAATGAGATGGGGTTCCCATCAGCCTTaGAGCAGTCCTGTAGAGATC +
Preference number: 4 (lower is better)
Translates to: SGLVFFLSPPLSTYIMRWGSHQP*SSPVEI
Trigger: GATCTCTACAGGACTGCTTCAAGGCTGATGGGAACC...CCATCTCATTATGTACGTAGATAGAGGTGGAGACAGGAAAAAGACTAAGCCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337400.6
CDS-3UTR TCA 90 bp AATATACATTTCAATTTTGGAGATTGTTCAGACACTGAGAAGAGCTGTATCCTCGCTGTGGTCCCCCATTaGGCTCTGGGGCTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: NIHFNFGDCSDTEKSCILAVVPH*ALGLLL
Trigger: CAGAAGGAGCCCCAGAGCTCAATGGGGGACCACAGC...GAGGATACAGCTCTTCTCAGTGTCTGAACAATCTCCAAAATTGAAATGTATATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
CDS-3UTR TCA 90 bp AAGGGGAGGGCAGTAGAGCTATTGGGACAAATGGACATCAGAATGAACAGGCTCAAATGGACATCAGAATaGACAGGCTCAGTTTATCCC +
Preference number: 4 (lower is better)
Translates to: KGRAVELLGQMDIRMNRLKWTSE*TGSVYP
Trigger: GGGATAAACTGAGCCTGTTCATTCTGATGTCCATTT...GAGCCTGTTCATTCTGATGTCCATTTGTCCCAATAGCTCTACTGCCCTCCCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR TCA 90 bp GAAGGGAGGTGCATGGAGCCTGCAGGTAAAGTGATTTCAGTGCTTATGTGTGTGAAATGGACATCAGAATaGACAGGCTCAGTTTATCCC +
Preference number: 4 (lower is better)
Translates to: EGRCMEPAGKVISVLMCVKWTSE*TGSVYP
Trigger: GGGATAAACTGAGCCTGTTCATTCTGATGTCCATTT...CACACACATAAGCACTGAAATCACTTTACCTGCAGGCTCCATGCACCTCCCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp CACGTCTGGCTTAGTCTTTTTCCTGTCTCCACCTCTATCTACGTACATAATGAGAGAGGTCTGTGTAGCTaGTGGAAGGAAGTGCATGCT +
Preference number: 4 (lower is better)
Translates to: HVWLSLFPVSTSIYVHNERGLCS*WKEVHA
Trigger: AGCATGCACTTCCTTCCAGCAGCTACACAGACCTCT...CTCATTATGTACGTAGATAGAGGTGGAGACAGGAAAAAGACTAAGCCAGACGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337400.6
CDS-3UTR GCA 90 bp TCTGGCTTAGTCTTTTTCCTGTCTCCACCTCTATCTACGTACATAATGAGATGGGGAGCTGATCCTGCATaGTCAGTCAGTGCCTTGCAT +
Preference number: 4 (lower is better)
Translates to: SGLVFFLSPPLSTYIMRWGADPA*SVSALH
Trigger: ATGCAAGGCACTGACTGAGCATGCAGGATCAGCTCC...CCATCTCATTATGTACGTAGATAGAGGTGGAGACAGGAAAAAGACTAAGCCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337400.6
CDS-3UTR CCA 90 bp CACGTCTGGCTTAGTCTTTTTCCTGTCTCCACCTCTATCTACGTACATAATGAGTTGAGAAGGGTAACCTaGTCGTTGAGGAAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: HVWLSLFPVSTSIYVHNELRRVT*SLRKRL
Trigger: CAGCCTCTTCCTCAACGACCAGGTTACCCTTCTCAA...CTCATTATGTACGTAGATAGAGGTGGAGACAGGAAAAAGACTAAGCCAGACGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337400.6
CDS-3UTR CCA 90 bp AATATACATTTCAATTTTGGAGATTGTTCAGACACTGAGAAGAGCTGTATCCTCCCAACCCCCATCAGCTaGGTAGGTGGGGAGCGGGAA +
Preference number: 4 (lower is better)
Translates to: NIHFNFGDCSDTEKSCILPTPIS*VGGERE
Trigger: TTCCCGCTCCCCACCTACCCAGCTGATGGGGGTTGG...GAGGATACAGCTCTTCTCAGTGTCTGAACAATCTCCAAAATTGAAATGTATATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR TCA 90 bp AATATACATTTCAATTTTGGAGATTGTTCAGACACTGAGAAGAGCTGTATCCTCTCTTGGCGAACTCAGTaGGCTCCCGCACGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: NIHFNFGDCSDTEKSCILSWRTQ*APARSP
Trigger: TGGAGACCGTGCGGGAGCTCACTGAGTTCGCCAAGA...GAGGATACAGCTCTTCTCAGTGTCTGAACAATCTCCAAAATTGAAATGTATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp CACGTCTGGCTTAGTCTTTTTCCTGTCTCCACCTCTATCTACGTACATAATGAGTCTGAATCTTGCAGCTaGGCTCACACTTCTCGTACT +
Preference number: 4 (lower is better)
Translates to: HVWLSLFPVSTSIYVHNESESCS*AHTSRT
Trigger: AGTACGAGAAGTGTGAGCGCAGCTGCAAGATTCAGA...CTCATTATGTACGTAGATAGAGGTGGAGACAGGAAAAAGACTAAGCCAGACGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337400.6
CDS-3UTR TCA 90 bp GAAGGGAGGTGCATGGAGCCTGCAGGTAAAGTGATTTCAGTGCTTATGTGTGTGGTTCTATGCTGCTGGTaGAATAATACAAAACATCTC +
Preference number: 4 (lower is better)
Translates to: EGRCMEPAGKVISVLMCVVLCCW*NNTKHL
Trigger: GAGATGTTTTGTATTATTTCACCAGCAGCATAGAAC...CACACACATAAGCACTGAAATCACTTTACCTGCAGGCTCCATGCACCTCCCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp AATATACATTTCAATTTTGGAGATTGTTCAGACACTGAGAAGAGCTGTATCCTCCCGTCACAGCCCATCTaGAGTTGGTCCAGCAGTGAG +
Preference number: 4 (lower is better)
Translates to: NIHFNFGDCSDTEKSCILPSQPI*SWSSSE
Trigger: CTCACTGCTGGACCAACTGCAGATGGGCTGTGACGG...GAGGATACAGCTCTTCTCAGTGTCTGAACAATCTCCAAAATTGAAATGTATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000448077.6
CDS-3UTR GCA 90 bp AATATACATTTCAATTTTGGAGATTGTTCAGACACTGAGAAGAGCTGTATCCTCACCTGGAGGGAACCCTaGCTACTTCCAAGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: NIHFNFGDCSDTEKSCILTWREP*LLPSWE
Trigger: CTCCCAGCTTGGAAGTAGGCAGGGTTCCCTCCAGGT...GAGGATACAGCTCTTCTCAGTGTCTGAACAATCTCCAAAATTGAAATGTATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp AATATACATTTCAATTTTGGAGATTGTTCAGACACTGAGAAGAGCTGTATCCTCTGGAGCAGGATCAGTTaGGTCAGTGGGTGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: NIHFNFGDCSDTEKSCILWSRIS*VSGWPQ
Trigger: CTGAGGCCACCCACTGACCCAACTGATCCTGCTCCA...GAGGATACAGCTCTTCTCAGTGTCTGAACAATCTCCAAAATTGAAATGTATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp AATATACATTTCAATTTTGGAGATTGTTCAGACACTGAGAAGAGCTGTATCCTCGGGCCTGAACTCCCGTaGAGCCAGCTAGAGAAAGGA +
Preference number: 4 (lower is better)
Translates to: NIHFNFGDCSDTEKSCILGPELP*SQLEKG
Trigger: TCCTTTCTCTAGCTGGCTCCACGGGAGTTCAGGCCC...GAGGATACAGCTCTTCTCAGTGTCTGAACAATCTCCAAAATTGAAATGTATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR TCA 90 bp AATATACATTTCAATTTTGGAGATTGTTCAGACACTGAGAAGAGCTGTATCCTCAGAAGACGTGCACGCTaGTCTCCTTGTAGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: NIHFNFGDCSDTEKSCILRRRAR*SPCREA
Trigger: TGCCTCCCTACAAGGAGATCAGCGTGCACGTCTTCT...GAGGATACAGCTCTTCTCAGTGTCTGAACAATCTCCAAAATTGAAATGTATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp AATATACATTTCAATTTTGGAGATTGTTCAGACACTGAGAAGAGCTGTATCCTCCTGGAAGGAAGTGCATaGTGTGGTCCCCCATTGAGC +
Preference number: 4 (lower is better)
Translates to: NIHFNFGDCSDTEKSCILLEGSA*CGPPLS
Trigger: GCTCAATGGGGGACCACAGCATGCACTTCCTTCCAG...GAGGATACAGCTCTTCTCAGTGTCTGAACAATCTCCAAAATTGAAATGTATATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
CDS-3UTR GCA 90 bp AATATACATTTCAATTTTGGAGATTGTTCAGACACTGAGAAGAGCTGTATCCTCGCTGCTGGAAGGAAGTaGATGCTGTGGTCCCCCATT +
Preference number: 4 (lower is better)
Translates to: NIHFNFGDCSDTEKSCILAAGRK*MLWSPI
Trigger: AATGGGGGACCACAGCATGCACTTCCTTCCAGCAGC...GAGGATACAGCTCTTCTCAGTGTCTGAACAATCTCCAAAATTGAAATGTATATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
CDS-3UTR GCA 90 bp AATATACATTTCAATTTTGGAGATTGTTCAGACACTGAGAAGAGCTGTATCCTCCACCAGCCCCTTCTCTaGCTGCCACAATGTCTCGAT +
Preference number: 4 (lower is better)
Translates to: NIHFNFGDCSDTEKSCILHQPLL*LPQCLD
Trigger: ATCGAGACATTGTGGCAGGCAGAGAAGGGGCTGGTG...GAGGATACAGCTCTTCTCAGTGTCTGAACAATCTCCAAAATTGAAATGTATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp AATATACATTTCAATTTTGGAGATTGTTCAGACACTGAGAAGAGCTGTATCCTCAGTCAGTCCAGGCCATaGTTAGCCTTCCCTGGAACC +
Preference number: 4 (lower is better)
Translates to: NIHFNFGDCSDTEKSCILSQSRP*LAFPGT
Trigger: GGTTCCAGGGAAGGCTAAGCATGGCCTGGACTGACT...GAGGATACAGCTCTTCTCAGTGTCTGAACAATCTCCAAAATTGAAATGTATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp AATATACATTTCAATTTTGGAGATTGTTCAGACACTGAGAAGAGCTGTATCCTCATGACTATAGGGGGCTaGAGTCAGTCCAGGCCATGC +
Preference number: 4 (lower is better)
Translates to: NIHFNFGDCSDTEKSCILMTIGG*SQSRPC
Trigger: GCATGGCCTGGACTGACTGCAGCCCCCTATAGTCAT...GAGGATACAGCTCTTCTCAGTGTCTGAACAATCTCCAAAATTGAAATGTATATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CCA 90 bp AATATACATTTCAATTTTGGAGATTGTTCAGACACTGAGAAGAGCTGTATCCTCTACTGGGCATCAGGGTaGTTGGCCTGCAGGTGGAAT +
Preference number: 4 (lower is better)
Translates to: NIHFNFGDCSDTEKSCILYWASG*LACRWN
Trigger: ATTCCACCTGCAGGCCAACCACCCTGATGCCCAGTA...GAGGATACAGCTCTTCTCAGTGTCTGAACAATCTCCAAAATTGAAATGTATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp AATATACATTTCAATTTTGGAGATTGTTCAGACACTGAGAAGAGCTGTATCCTCCGTACTCCAGCTTCATaGGGATCGTACGACGGAAGA +
Preference number: 4 (lower is better)
Translates to: NIHFNFGDCSDTEKSCILRTPAS*GSYDGR
Trigger: TCTTCCGTCGTACGATCCGCATGAAGCTGGAGTACG...GAGGATACAGCTCTTCTCAGTGTCTGAACAATCTCCAAAATTGAAATGTATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000448077.6
CDS-3UTR GCA 90 bp CACGTCTGGCTTAGTCTTTTTCCTGTCTCCACCTCTATCTACGTACATAATGAGAACATGACAGCATACTaGCTGTTAGTCCTTTTCCTT +
Preference number: 4 (lower is better)
Translates to: HVWLSLFPVSTSIYVHNENMTAY*LLVLFL
Trigger: AAGGAAAAGGACTAACAGGCAGTATGCTGTCATGTT...CTCATTATGTACGTAGATAGAGGTGGAGACAGGAAAAAGACTAAGCCAGACGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337400.6
CDS-3UTR TCA 90 bp CACGTCTGGCTTAGTCTTTTTCCTGTCTCCACCTCTATCTACGTACATAATGAGTCTTTTTGGTCATGTTaGAGTTTTTCAGGTAGGCAT +
Preference number: 4 (lower is better)
Translates to: HVWLSLFPVSTSIYVHNESFWSC*SFSGRH
Trigger: ATGCCTACCTGAAAAACTTCAACATGACCAAAAAGA...CTCATTATGTACGTAGATAGAGGTGGAGACAGGAAAAAGACTAAGCCAGACGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000337400.6
CDS-3UTR CCA 90 bp AATATACATTTCAATTTTGGAGATTGTTCAGACACTGAGAAGAGCTGTATCCTCTTGAGAAGGGTAACCTaGTCGTTGAGGAAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: NIHFNFGDCSDTEKSCILLRRVT*SLRKRL
Trigger: CAGCCTCTTCCTCAACGACCAGGTTACCCTTCTCAA...GAGGATACAGCTCTTCTCAGTGTCTGAACAATCTCCAAAATTGAAATGTATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR TCA 90 bp AATATACATTTCAATTTTGGAGATTGTTCAGACACTGAGAAGAGCTGTATCCTCAGATTGTTCAGACACTaGGAAGAGCTGTATCCTCAG +
Preference number: 4 (lower is better)
Translates to: NIHFNFGDCSDTEKSCILRLFRH*EELYPQ
Trigger: CTGAGGATACAGCTCTTCTCAGTGTCTGAACAATCT...GAGGATACAGCTCTTCTCAGTGTCTGAACAATCTCCAAAATTGAAATGTATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR GCA 90 bp AATATACATTTCAATTTTGGAGATTGTTCAGACACTGAGAAGAGCTGTATCCTCATGGCTCAAGTCTTTTaGTCTGAAGACAGGAGACAG +
Preference number: 4 (lower is better)
Translates to: NIHFNFGDCSDTEKSCILMAQVF*SEDRRQ
Trigger: CTGTCTCCTGTCTTCAGAGCAAAAGACTTGAGCCAT...GAGGATACAGCTCTTCTCAGTGTCTGAACAATCTCCAAAATTGAAATGTATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR TCA 90 bp AATATACATTTCAATTTTGGAGATTGTTCAGACACTGAGAAGAGCTGTATCCTCAAATGGACATCAGAATaGACAGGCTCAGTTTATCCC +
Preference number: 4 (lower is better)
Translates to: NIHFNFGDCSDTEKSCILKWTSE*TGSVYP
Trigger: GGGATAAACTGAGCCTGTTCATTCTGATGTCCATTT...GAGGATACAGCTCTTCTCAGTGTCTGAACAATCTCCAAAATTGAAATGTATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS CCA 90 bp GCTCAGGCACAGTGCCCTGCAGTGAGGGCCAACCCCCAGGACGACTaGGTGTGCCAGGCCAGCCCACCTGCCCCACTCTCACTCACCTCC +
Preference number: 5 (lower is better)
Translates to: AQAQCPAVRANPQDD*VCQASPPAPLSLTS
Trigger: GGAGGTGAGTGAGAGTGGGGCAGGTGGGCTGGCCTGGCACACCCAGTCGTCCTGGGGGTTGGCCCTCACTGCAGGGCACTGTGCCTGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337400.6
CDS-3UTR CAA 90 bp TGGGAGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCCGTGTGGCTGGCTTaGCCGGTGAGGATGCTGCGG +
Preference number: 5 (lower is better)
Translates to: WESAVQRPVQGAISNIGLAVWLA*PVRMLR
Trigger: CCGCAGCATCCTCACCGGCAAAGCCAGCCACACGGC...CAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCTCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CAA 90 bp GTGCCCTGCAGTGAGGGCCAACCCCCAGGACGACTGGGTGTGCCAGGCCAGCCCACCAGCAGCCCGTCCTaGTTGACGATAGAGGCCAGC +
Preference number: 5 (lower is better)
Translates to: VPCSEGQPPGRLGVPGQPTSSPS*LTIEAS
Trigger: GCTGGCCTCTATCGTCAACAAGGACGGGCTGCTGGT...GGGCTGGCCTGGCACACCCAGTCGTCCTGGGGGTTGGCCCTCACTGCAGGGCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337400.6
CDS CCA 90 bp CCTCCTCTTCCCGGACCTCAGGGGCTTCCTCCTGTGGCTGCTCCATaGCTGATCTCCCCTCGGCGCCACACCTGCAGGCCCAGTCATAGC +
Preference number: 5 (lower is better)
Translates to: PPLPGPQGLPPVAAP*LISPRRHTCRPSHS
Trigger: GCTATGACTGGGCCTGCAGGTGTGGCGCCGAGGGGAGATCAGCCATGGAGCAGCCACAGGAGGAAGCCCCTGAGGTCCGGGAAGAGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000337400.6
ENST00000360694.8
ENST00000418635.6
CDS-3UTR CAA 90 bp AGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAGCCGTGTGGCTGGCTTaGCCGGTGAGGATGCTGCGG +
Preference number: 5 (lower is better)
Translates to: RVPSSGQCRGPSATLAWQAVWLA*PVRMLR
Trigger: CCGCAGCATCCTCACCGGCAAAGCCAGCCACACGGC...TTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CAA 90 bp GAGGGAACCCTGCCTACTTCCAAGCTGGGAGAGTGCCGTCCAGCGGCCAGTGCAGCCGTGTGGCTGGCTTaGCCGGTGAGGATGCTGCGG +
Preference number: 5 (lower is better)
Translates to: EGTLPTSKLGECRPAASAAVWLA*PVRMLR
Trigger: CCGCAGCATCCTCACCGGCAAAGCCAGCCACACGGC...TGCACTGGCCGCTGGACGGCACTCTCCCAGCTTGGAAGTAGGCAGGGTTCCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS TCA 90 bp CTCTTCCCGGACCTCAGGGGCTTCCTCCTGTGGCTGCTCCATGGCTaGTCTCCCCTCGGCGCCACACCTGCAGGCCCAGTCATAGCTCTG +
Preference number: 5 (lower is better)
Translates to: LFPDLRGFLLWLLHG*SPLGATPAGPVIAL
Trigger: CAGAGCTATGACTGGGCCTGCAGGTGTGGCGCCGAGGGGAGATCAGCCATGGAGCAGCCACAGGAGGAAGCCCCTGAGGTCCGGGAAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000337400.6
ENST00000360694.8
ENST00000418635.6
CDS GCA 90 bp CACTCCATGTTGAGGCTGCCGCATGAGGCCCCGTCACAGCCCATCTaGAGTTGGTCCAGCAGTGAGGGTGGCGAGGAGCTCCGGGAGAGG +
Preference number: 5 (lower is better)
Translates to: HSMLRLPHEAPSQPI*SWSSSEGGEELRER
Trigger: CCTCTCCCGGAGCTCCTCGCCACCCTCACTGCTGGACCAACTGCAGATGGGCTGTGACGGGGCCTCATGCGGCAGCCTCAACATGGAGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000337400.6
ENST00000360694.8
ENST00000448077.6
CDS-3UTR CAA 90 bp GCAGAGAGTGATCCTGGGGCATGGAAGGGAGGCTGCAGCGCCCGTAGGGGCAGGTCGGCCACCTGTGGGTaGTACTGGCTCCCCTCGTTT +
Preference number: 5 (lower is better)
Translates to: AESDPGAWKGGCSARRGRSATCG*YWLPSF
Trigger: AAACGAGGGGAGCCAGTACAACCCACAGGTGGCCGA...CCTGCCCCTACGGGCGCTGCAGCCTCCCTTCCATGCCCCAGGATCACTCTCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CAA 90 bp GCAGAGAGTGATCCTGGGGCATGGAAGGGAGGCTGCAGCGCCCGTAGGGGCAGGGTGCTCGGTGACCAGTaGCCGCAGGTCAGCCATCTT +
Preference number: 5 (lower is better)
Translates to: AESDPGAWKGGCSARRGRVLGDQ*PQVSHL
Trigger: AAGATGGCTGACCTGCGGCAACTGGTCACCGAGCAC...CCTGCCCCTACGGGCGCTGCAGCCTCCCTTCCATGCCCCAGGATCACTCTCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS CCA 90 bp ATGTTGAGGCTGCCGCATGAGGCCCCGTCACAGCCCATCTGCAGTTaGTCCAGCAGTGAGGGTGGCGAGGAGCTCCGGGAGAGGTCTGTG +
Preference number: 5 (lower is better)
Translates to: MLRLPHEAPSQPICS*SSSEGGEELRERSV
Trigger: CACAGACCTCTCCCGGAGCTCCTCGCCACCCTCACTGCTGGACCAACTGCAGATGGGCTGTGACGGGGCCTCATGCGGCAGCCTCAACAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311565.4
ENST00000337400.6
ENST00000360694.8
CDS CCA 90 bp ATGTTGAGGCTGCCGCATGAGGCCCCGTCACAGCCCATCTGCAGTTaGTCCAGCAGTGAGGGTGGCGAGGAGCTCCGGGAGAGGTCTCGT +
Preference number: 5 (lower is better)
Translates to: MLRLPHEAPSQPICS*SSSEGGEELRERSR
Trigger: ACGAGACCTCTCCCGGAGCTCCTCGCCACCCTCACTGCTGGACCAACTGCAGATGGGCTGTGACGGGGCCTCATGCGGCAGCCTCAACAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448077.6
CDS-3UTR CAA 90 bp GGGCCCACCTGGAGGGAACCCTGCCTACTTCCAAGCTGGGAGAGTGCCGTCCAGTGCTGTGGTCCCCCATaGAGCTCTGGGGCTCCTTCT +
Preference number: 5 (lower is better)
Translates to: GPTWREPCLLPSWESAVQCCGPP*SSGAPS
Trigger: AGAAGGAGCCCCAGAGCTCAATGGGGGACCACAGCA...CTGGACGGCACTCTCCCAGCTTGGAAGTAGGCAGGGTTCCCTCCAGGTGGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
CDS-3UTR CAA 90 bp GTGGGTGGCCTCAGCATCGGAGGGGCAATGACAGTCTTGGGGAGGCATCTGGCTACCCGGCACTCCATGTaGAGGCTGCCGCATGAGGCC +
Preference number: 5 (lower is better)
Translates to: VGGLSIGGAMTVLGRHLATRHSM*RLPHEA
Trigger: GGCCTCATGCGGCAGCCTCAACATGGAGTGCCGGGT...AGCCAGATGCCTCCCCAAGACTGTCATTGCCCCTCCGATGCTGAGGCCACCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000448077.6
CDS-3UTR CAA 90 bp CGTGGGACTCTGCTGCTCCAGGCCGGGTGCTCAAGGGCTGGTCAATGGAAAAGTGCCGTGTGGCTGGCTTaGCCGGTGAGGATGCTGCGG +
Preference number: 5 (lower is better)
Translates to: RGTLLLQAGCSRAGQWKSAVWLA*PVRMLR
Trigger: CCGCAGCATCCTCACCGGCAAAGCCAGCCACACGGC...ACTTTTCCATTGACCAGCCCTTGAGCACCCGGCCTGGAGCAGCAGAGTCCCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CAA 90 bp CAGGCACAGTGCCCTGCAGTGAGGGCCAACCCCCAGGACGACTGGGTGTGCCAGAAGCTGGGGATGCTCTaGGCGAACTCAGTGAGCTCC +
Preference number: 5 (lower is better)
Translates to: QAQCPAVRANPQDDWVCQKLGML*ANSVSS
Trigger: GGAGCTCACTGAGTTCGCCAAGAGCATCCCCAGCTT...CTGGCACACCCAGTCGTCCTGGGGGTTGGCCCTCACTGCAGGGCACTGTGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337400.6
CDS-3UTR CAA 90 bp TGGGAGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGACCAGCAGCCCGTCCTaGTTGACGATAGAGGCCAGC +
Preference number: 5 (lower is better)
Translates to: WESAVQRPVQGAISNIGLTSSPS*LTIEAS
Trigger: GCTGGCCTCTATCGTCAACAAGGACGGGCTGCTGGT...CAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCTCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CAA 90 bp GAGGGAACCCTGCCTACTTCCAAGCTGGGAGAGTGCCGTCCAGCGGCCAGTGCAACAAAGCCACTGCCGTaGGCTACCAGCAGCCCGTCC +
Preference number: 5 (lower is better)
Translates to: EGTLPTSKLGECRPAASATKPLP*ATSSPS
Trigger: GGACGGGCTGCTGGTAGCCAACGGCAGTGGCTTTGT...TGCACTGGCCGCTGGACGGCACTCTCCCAGCTTGGAAGTAGGCAGGGTTCCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CAA 90 bp GGGCCCACCTGGAGGGAACCCTGCCTACTTCCAAGCTGGGAGAGTGCCGTCCAGCTGGAGCAGGATCAGTaGGGTCAGTGGGTGGCCTCA +
Preference number: 5 (lower is better)
Translates to: GPTWREPCLLPSWESAVQLEQDQ*GQWVAS
Trigger: TGAGGCCACCCACTGACCCAACTGATCCTGCTCCAG...CTGGACGGCACTCTCCCAGCTTGGAAGTAGGCAGGGTTCCCTCCAGGTGGGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CAA 90 bp TGGGAGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGCCAGGAAGCCTGGGCTaGAACCCCAGTTCTCCTACC +
Preference number: 5 (lower is better)
Translates to: WESAVQRPVQGAISNIGLPGSLG*NPSSPT
Trigger: GGTAGGAGAACTGGGGTTCAAGCCCAGGCTTCCTGG...CAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCTCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CAA 90 bp CTACTTCCAAGCTGGGAGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCCCAGGAAGCCTGGGCTaGAACCCCAGTTCTCCTACC +
Preference number: 5 (lower is better)
Translates to: LLPSWESAVQRPVQGAISPGSLG*NPSSPT
Trigger: GGTAGGAGAACTGGGGTTCAAGCCCAGGCTTCCTGG...GCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCTCCCAGCTTGGAAGTAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CAA 90 bp TCAAGGGCTGGTCAATGGAAAAGTCATGTGGGTGGGCCCCTCCAGTGCTGGCCCACCCGGCACTCCATGTaGAGGCTGCCGCATGAGGCC +
Preference number: 5 (lower is better)
Translates to: SRAGQWKSHVGGPLQCWPTRHSM*RLPHEA
Trigger: GGCCTCATGCGGCAGCCTCAACATGGAGTGCCGGGT...GGGCCAGCACTGGAGGGGCCCACCCACATGACTTTTCCATTGACCAGCCCTTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000448077.6
CDS-3UTR CAA 90 bp GAGGGAACCCTGCCTACTTCCAAGCTGGGAGAGTGCCGTCCAGCGGCCAGTGCATCGGCCACCTGTGGGTaGTACTGGCTCCCCTCGTTT +
Preference number: 5 (lower is better)
Translates to: EGTLPTSKLGECRPAASASATCG*YWLPSF
Trigger: AAACGAGGGGAGCCAGTACAACCCACAGGTGGCCGA...TGCACTGGCCGCTGGACGGCACTCTCCCAGCTTGGAAGTAGGCAGGGTTCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CAA 90 bp CAAGATCACAGGGACACTTCCCCACACTGTCAGAGCTCAGGCACAGTGCCCTGCGCCGTGTGGCTGGCTTaGCCGGTGAGGATGCTGCGG +
Preference number: 5 (lower is better)
Translates to: QDHRDTSPHCQSSGTVPCAVWLA*PVRMLR
Trigger: CCGCAGCATCCTCACCGGCAAAGCCAGCCACACGGC...GCAGGGCACTGTGCCTGAGCTCTGACAGTGTGGGGAAGTGTCCCTGTGATCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337400.6
CDS-3UTR CAA 90 bp TGGGAGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGAAGCTGGGGATGCTCTaGGCGAACTCAGTGAGCTCC +
Preference number: 5 (lower is better)
Translates to: WESAVQRPVQGAISNIGLKLGML*ANSVSS
Trigger: GGAGCTCACTGAGTTCGCCAAGAGCATCCCCAGCTT...CAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCTCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CAA 90 bp CTACTTCCAAGCTGGGAGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAAGCTGGGGATGCTCTaGGCGAACTCAGTGAGCTCC +
Preference number: 5 (lower is better)
Translates to: LLPSWESAVQRPVQGAISKLGML*ANSVSS
Trigger: GGAGCTCACTGAGTTCGCCAAGAGCATCCCCAGCTT...GCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCTCCCAGCTTGGAAGTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CAA 90 bp GCAGAGAGTGATCCTGGGGCATGGAAGGGAGGCTGCAGCGCCCGTAGGGGCAGGTCGTGCACGCCATACTaGAGAAGGGTAACCTGGTCG +
Preference number: 5 (lower is better)
Translates to: AESDPGAWKGGCSARRGRSCTPY*RRVTWS
Trigger: CGACCAGGTTACCCTTCTCAAGTATGGCGTGCACGA...CCTGCCCCTACGGGCGCTGCAGCCTCCCTTCCATGCCCCAGGATCACTCTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CAA 90 bp CTACTTCCAAGCTGGGAGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAGCAGCCCGTCCTTGTaGACGATAGAGGCCAGCATG +
Preference number: 5 (lower is better)
Translates to: LLPSWESAVQRPVQGAISSSPSL*TIEASM
Trigger: CATGCTGGCCTCTATCGTCAACAAGGACGGGCTGCT...GCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCTCCCAGCTTGGAAGTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CAA 90 bp CCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAACCAGTACCAGCAGCCCGTCCTaGTTGACGATAGAGGCCAGC +
Preference number: 5 (lower is better)
Translates to: PSSGQCRGPSATLAWQTSTSSPS*LTIEAS
Trigger: GCTGGCCTCTATCGTCAACAAGGACGGGCTGCTGGT...ACTGGTTTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CAA 90 bp AGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAACCAGCAGCCCGTCCTaGTTGACGATAGAGGCCAGC +
Preference number: 5 (lower is better)
Translates to: RVPSSGQCRGPSATLAWQTSSPS*LTIEAS
Trigger: GCTGGCCTCTATCGTCAACAAGGACGGGCTGCTGGT...TTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CAA 90 bp GCAGAGAGTGATCCTGGGGCATGGAAGGGAGGCTGCAGCGCCCGTAGGGGCAGGATATCACTGAAGGGTTaGCGGAGGCTGCGCAGGAAC +
Preference number: 5 (lower is better)
Translates to: AESDPGAWKGGCSARRGRISLKG*RRLRRN
Trigger: GTTCCTGCGCAGCCTCCGCAAACCCTTCAGTGATAT...CCTGCCCCTACGGGCGCTGCAGCCTCCCTTCCATGCCCCAGGATCACTCTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CAA 90 bp GAGGGAACCCTGCCTACTTCCAAGCTGGGAGAGTGCCGTCCAGCGGCCAGTGCAGTGCTCGGTGACCAGTaGCCGCAGGTCAGCCATCTT +
Preference number: 5 (lower is better)
Translates to: EGTLPTSKLGECRPAASAVLGDQ*PQVSHL
Trigger: AAGATGGCTGACCTGCGGCAACTGGTCACCGAGCAC...TGCACTGGCCGCTGGACGGCACTCTCCCAGCTTGGAAGTAGGCAGGGTTCCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CAA 90 bp AGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAGGGGCAATGACAGTCTaGGGGAGGCATCTGGCTCTC +
Preference number: 5 (lower is better)
Translates to: RVPSSGQCRGPSATLAWQGAMTV*GRHLAL
Trigger: GAGAGCCAGATGCCTCCCCAAGACTGTCATTGCCCC...TTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CAA 90 bp CCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAACCAGTCCAGGAAGCCTGGGCTaGAACCCCAGTTCTCCTACC +
Preference number: 5 (lower is better)
Translates to: PSSGQCRGPSATLAWQTSPGSLG*NPSSPT
Trigger: GGTAGGAGAACTGGGGTTCAAGCCCAGGCTTCCTGG...ACTGGTTTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS GCA 90 bp GGCCACCTGTGGGTTGTACTGGCTCCCCTCGTTTGCAGTCAGCCCTaGCACCAGCTTCCTCTTCTCAGCCTCCGGCATCCGACCAAAACG +
Preference number: 5 (lower is better)
Translates to: GHLWVVLAPLVCSQP*HQLPLLSLRHPTKT
Trigger: CGTTTTGGTCGGATGCCGGAGGCTGAGAAGAGGAAGCTGGTGGCAGGGCTGACTGCAAACGAGGGGAGCCAGTACAACCCACAGGTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311565.4
ENST00000337400.6
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS CCA 90 bp TGGTTGGCCTGCAGGTGGAATTCGAGGGCACGCAGGATGGTGTCCTaGATAGCCTCCACCCGTGGAACGTTCATGAGGCCTGGCCGGTCT +
Preference number: 5 (lower is better)
Translates to: WLACRWNSRARRMVS*IASTRGTFMRPGRS
Trigger: AGACCGGCCAGGCCTCATGAACGTTCCACGGGTGGAGGCTATCCAGGACACCATCCTGCGTGCCCTCGAATTCCACCTGCAGGCCAACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CAA 90 bp CTACTTCCAAGCTGGGAGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAGGGTAACCTGGTCGTaGAGGAAGAGGCTGCTGAAG +
Preference number: 5 (lower is better)
Translates to: LLPSWESAVQRPVQGAISRVTWS*RKRLLK
Trigger: CTTCAGCAGCCTCTTCCTCAACGACCAGGTTACCCT...GCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCTCCCAGCTTGGAAGTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CAA 90 bp TGGGAGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGAGGGTAACCTGGTCGTaGAGGAAGAGGCTGCTGAAG +
Preference number: 5 (lower is better)
Translates to: WESAVQRPVQGAISNIGLRVTWS*RKRLLK
Trigger: CTTCAGCAGCCTCTTCCTCAACGACCAGGTTACCCT...CAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCTCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CAA 90 bp AGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAAGCAGCCCGTCCTTGTaGACGATAGAGGCCAGCATG +
Preference number: 5 (lower is better)
Translates to: RVPSSGQCRGPSATLAWQSSPSL*TIEASM
Trigger: CATGCTGGCCTCTATCGTCAACAAGGACGGGCTGCT...TTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CAA 90 bp AGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAACCAGTGTGAAGACAAAGCCACTGCCGTaGGCTACCAGCAGCCCGTCC +
Preference number: 5 (lower is better)
Translates to: SGQCRGPSATLAWQTSVKTKPLP*ATSSPS
Trigger: GGACGGGCTGCTGGTAGCCAACGGCAGTGGCTTTGT...CTTCACACTGGTTTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CAA 90 bp GTGGGTGGCCTCAGCATCGGAGGGGCAATGACAGTCTTGGGGAGGCATCTGGCTCTGGAGCAGGATCAGTaGGGTCAGTGGGTGGCCTCA +
Preference number: 5 (lower is better)
Translates to: VGGLSIGGAMTVLGRHLALEQDQ*GQWVAS
Trigger: TGAGGCCACCCACTGACCCAACTGATCCTGCTCCAG...AGCCAGATGCCTCCCCAAGACTGTCATTGCCCCTCCGATGCTGAGGCCACCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CAA 90 bp CCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAACCAGTGGGCCATCAGCAACATaGGCCTGGCAAACCAGTGTG +
Preference number: 5 (lower is better)
Translates to: PSSGQCRGPSATLAWQTSGPSAT*AWQTSV
Trigger: CACACTGGTTTGCCAGGCCAATGTTGCTGATGGCCC...ACTGGTTTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CAA 90 bp AGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAGTCCTAGGGGCAGAATaGGGTGTGCTGCTTCCTCCA +
Preference number: 5 (lower is better)
Translates to: RVPSSGQCRGPSATLAWQVLGAE*GVLLPP
Trigger: TGGAGGAAGCAGCACACCCAATTCTGCCCCTAGGAC...TTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS GCA 90 bp TGCAGCAGCTTGGGGAAGAGGTACTGGGCATCAGGGTGGTTGGCCTaGAGGTGGAATTCGAGGGCACGCAGGATGGTGTCCTGGATAGCC +
Preference number: 5 (lower is better)
Translates to: CSSLGKRYWASGWLA*RWNSRARRMVSWIA
Trigger: GGCTATCCAGGACACCATCCTGCGTGCCCTCGAATTCCACCTGCAGGCCAACCACCCTGATGCCCAGTACCTCTTCCCCAAGCTGCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS CCA 90 bp GCTCCGGGAGAGGTCTGTGTAGCTGCTGGAAGGAAGTGCATGCTGTaGTCCCCCATTGAGCTCTGGGGCTCCTTCTGCCTCTGCCACTTC +
Preference number: 5 (lower is better)
Translates to: APGEVCVAAGRKCML*SPIELWGSFCLCHF
Trigger: GAAGTGGCAGAGGCAGAAGGAGCCCCAGAGCTCAATGGGGGACCACAGCATGCACTTCCTTCCAGCAGCTACACAGACCTCTCCCGGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311565.4
ENST00000337400.6
ENST00000360694.8
CDS-3UTR CAA 90 bp CCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAACCAGTCCAAAACGGATAGCGTaGTGTGACATGCCCAGTGCC +
Preference number: 5 (lower is better)
Translates to: PSSGQCRGPSATLAWQTSPKRIA*CDMPSA
Trigger: GGCACTGGGCATGTCACACAACGCTATCCGTTTTGG...ACTGGTTTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000448077.6
CDS-3UTR CAA 90 bp GAGGGAACCCTGCCTACTTCCAAGCTGGGAGAGTGCCGTCCAGCGGCCAGTGCACCAAAACGGATAGCGTaGTGTGACATGCCCAGTGCC +
Preference number: 5 (lower is better)
Translates to: EGTLPTSKLGECRPAASAPKRIA*CDMPSA
Trigger: GGCACTGGGCATGTCACACAACGCTATCCGTTTTGG...TGCACTGGCCGCTGGACGGCACTCTCCCAGCTTGGAAGTAGGCAGGGTTCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000448077.6
CDS-3UTR CAA 90 bp GTGGGTGGCCTCAGCATCGGAGGGGCAATGACAGTCTTGGGGAGGCATCTGGCTAAGCTGGGGATGCTCTaGGCGAACTCAGTGAGCTCC +
Preference number: 5 (lower is better)
Translates to: VGGLSIGGAMTVLGRHLAKLGML*ANSVSS
Trigger: GGAGCTCACTGAGTTCGCCAAGAGCATCCCCAGCTT...AGCCAGATGCCTCCCCAAGACTGTCATTGCCCCTCCGATGCTGAGGCCACCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CAA 90 bp GTGGGTGGCCTCAGCATCGGAGGGGCAATGACAGTCTTGGGGAGGCATCTGGCTAGCAGCCCGTCCTTGTaGACGATAGAGGCCAGCATG +
Preference number: 5 (lower is better)
Translates to: VGGLSIGGAMTVLGRHLASSPSL*TIEASM
Trigger: CATGCTGGCCTCTATCGTCAACAAGGACGGGCTGCT...AGCCAGATGCCTCCCCAAGACTGTCATTGCCCCTCCGATGCTGAGGCCACCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CAA 90 bp TCAAGGGCTGGTCAATGGAAAAGTCATGTGGGTGGGCCCCTCCAGTGCTGGCCCGTGCTCGGTGACCAGTaGCCGCAGGTCAGCCATCTT +
Preference number: 5 (lower is better)
Translates to: SRAGQWKSHVGGPLQCWPVLGDQ*PQVSHL
Trigger: AAGATGGCTGACCTGCGGCAACTGGTCACCGAGCAC...GGGCCAGCACTGGAGGGGCCCACCCACATGACTTTTCCATTGACCAGCCCTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CAA 90 bp AACCCCCATCAGCTGGGTAGGTGGGGAGCGGGAAGAATCCTGCCAGCAGAGAGTCTGGAGCAGGATCAGTaGGGTCAGTGGGTGGCCTCA +
Preference number: 5 (lower is better)
Translates to: NPHQLGRWGAGRILPAESLEQDQ*GQWVAS
Trigger: TGAGGCCACCCACTGACCCAACTGATCCTGCTCCAG...ACTCTCTGCTGGCAGGATTCTTCCCGCTCCCCACCTACCCAGCTGATGGGGGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CAA 90 bp AGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAACCAGTGTGAAGCTGGAGCAGGATCAGTaGGGTCAGTGGGTGGCCTCA +
Preference number: 5 (lower is better)
Translates to: SGQCRGPSATLAWQTSVKLEQDQ*GQWVAS
Trigger: TGAGGCCACCCACTGACCCAACTGATCCTGCTCCAG...CTTCACACTGGTTTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CAA 90 bp GTGGGTGGCCTCAGCATCGGAGGGGCAATGACAGTCTTGGGGAGGCATCTGGCTGGGCCATCAGCAACATaGGCCTGGCAAACCAGTGTG +
Preference number: 5 (lower is better)
Translates to: VGGLSIGGAMTVLGRHLAGPSAT*AWQTSV
Trigger: CACACTGGTTTGCCAGGCCAATGTTGCTGATGGCCC...AGCCAGATGCCTCCCCAAGACTGTCATTGCCCCTCCGATGCTGAGGCCACCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CAA 90 bp GTGGGTGGCCTCAGCATCGGAGGGGCAATGACAGTCTTGGGGAGGCATCTGGCTGTCCTAGGGGCAGAATaGGGTGTGCTGCTTCCTCCA +
Preference number: 5 (lower is better)
Translates to: VGGLSIGGAMTVLGRHLAVLGAE*GVLLPP
Trigger: TGGAGGAAGCAGCACACCCAATTCTGCCCCTAGGAC...AGCCAGATGCCTCCCCAAGACTGTCATTGCCCCTCCGATGCTGAGGCCACCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CAA 90 bp GAGGGAACCCTGCCTACTTCCAAGCTGGGAGAGTGCCGTCCAGCGGCCAGTGCACCGGGAGAGGTCTCGTaGGTGCATCTGTCTTCATCT +
Preference number: 5 (lower is better)
Translates to: EGTLPTSKLGECRPAASAPGEVS*VHLSSS
Trigger: AGATGAAGACAGATGCACCAACGAGACCTCTCCCGG...TGCACTGGCCGCTGGACGGCACTCTCCCAGCTTGGAAGTAGGCAGGGTTCCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448077.6
CDS TCA 90 bp CGCCACACCTGCAGGCCCAGTCATAGCTCTGGCATCGTCTGGGTCTaGACGCAGATGGACCTCTACAGGGTGGTTCCCATCAGCCTCGTT +
Preference number: 5 (lower is better)
Translates to: RHTCRPSHSSGIVWV*TQMDLYRVVPISLV
Trigger: AACGAGGCTGATGGGAACCACCCTGTAGAGGTCCATCTGCGTTCAGACCCAGACGATGCCAGAGCTATGACTGGGCCTGCAGGTGTGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360694.8
ENST00000418635.6
CDS GCA 90 bp GGCAGGCCATTCACCAACTGCTTCCACACCAGCCCCTTCTCTGCCTaGCACAATGTCTCGATGTCGTGGATCACAAAGGGCGCCGTGTGG +
Preference number: 5 (lower is better)
Translates to: GRPFTNCFHTSPFSA*HNVSMSWITKGAVW
Trigger: CCACACGGCGCCCTTTGTGATCCACGACATCGAGACATTGTGGCAGGCAGAGAAGGGGCTGGTGTGGAAGCAGTTGGTGAATGGCCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311565.4
ENST00000337400.6
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS GCA 90 bp GGGAGGCAGGCCATTCACCAACTGCTTCCACACCAGCCCCTTCTCTaGCTGCCACAATGTCTCGATGTCGTGGATCACAAAGGGCGCCGT +
Preference number: 5 (lower is better)
Translates to: GRQAIHQLLPHQPLL*LPQCLDVVDHKGRR
Trigger: ACGGCGCCCTTTGTGATCCACGACATCGAGACATTGTGGCAGGCAGAGAAGGGGCTGGTGTGGAAGCAGTTGGTGAATGGCCTGCCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311565.4
ENST00000337400.6
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS CCA 90 bp ATGTGCTTGGAGAAGGCCTTCAGGTCGGCCACCTGTGGGTTGTACTaGCTCCCCTCGTTTGCAGTCAGCCCTGCCACCAGCTTCCTCTTC +
Preference number: 5 (lower is better)
Translates to: MCLEKAFRSATCGLY*LPSFAVSPATSFLF
Trigger: GAAGAGGAAGCTGGTGGCAGGGCTGACTGCAAACGAGGGGAGCCAGTACAACCCACAGGTGGCCGACCTGAAGGCCTTCTCCAAGCACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311565.4
ENST00000337400.6
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS CCA 90 bp GGCATTGTAGATGTGCTTGGAGAAGGCCTTCAGGTCGGCCACCTGTaGGTTGTACTGGCTCCCCTCGTTTGCAGTCAGCCCTGCCACCAG +
Preference number: 5 (lower is better)
Translates to: GIVDVLGEGLQVGHL*VVLAPLVCSQPCHQ
Trigger: CTGGTGGCAGGGCTGACTGCAAACGAGGGGAGCCAGTACAACCCACAGGTGGCCGACCTGAAGGCCTTCTCCAAGCACATCTACAATGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311565.4
ENST00000337400.6
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CAA 90 bp CATGTTCCACTGCCAAGATCACAGGGACACTTCCCCACACTGTCAGAGCTCAGGACCCGGCACTCCATGTaGAGGCTGCCGCATGAGGCC +
Preference number: 5 (lower is better)
Translates to: HVPLPRSQGHFPTLSELRTRHSM*RLPHEA
Trigger: GGCCTCATGCGGCAGCCTCAACATGGAGTGCCGGGT...CCTGAGCTCTGACAGTGTGGGGAAGTGTCCCTGTGATCTTGGCAGTGGAACATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337400.6
CDS-3UTR CAA 90 bp CAAGATCACAGGGACACTTCCCCACACTGTCAGAGCTCAGGCACAGTGCCCTGCTCGGCCACCTGTGGGTaGTACTGGCTCCCCTCGTTT +
Preference number: 5 (lower is better)
Translates to: QDHRDTSPHCQSSGTVPCSATCG*YWLPSF
Trigger: AAACGAGGGGAGCCAGTACAACCCACAGGTGGCCGA...GCAGGGCACTGTGCCTGAGCTCTGACAGTGTGGGGAAGTGTCCCTGTGATCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337400.6
CDS-3UTR CAA 90 bp TCAAGGGCTGGTCAATGGAAAAGTCATGTGGGTGGGCCCCTCCAGTGCTGGCCCAAGCTGGGGATGCTCTaGGCGAACTCAGTGAGCTCC +
Preference number: 5 (lower is better)
Translates to: SRAGQWKSHVGGPLQCWPKLGML*ANSVSS
Trigger: GGAGCTCACTGAGTTCGCCAAGAGCATCCCCAGCTT...GGGCCAGCACTGGAGGGGCCCACCCACATGACTTTTCCATTGACCAGCCCTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CAA 90 bp GTGGGTGGCCTCAGCATCGGAGGGGCAATGACAGTCTTGGGGAGGCATCTGGCTAGGGTAACCTGGTCGTaGAGGAAGAGGCTGCTGAAG +
Preference number: 5 (lower is better)
Translates to: VGGLSIGGAMTVLGRHLARVTWS*RKRLLK
Trigger: CTTCAGCAGCCTCTTCCTCAACGACCAGGTTACCCT...AGCCAGATGCCTCCCCAAGACTGTCATTGCCCCTCCGATGCTGAGGCCACCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CAA 90 bp GTGGGTGGCCTCAGCATCGGAGGGGCAATGACAGTCTTGGGGAGGCATCTGGCTATATCACTGAAGGGTTaGCGGAGGCTGCGCAGGAAC +
Preference number: 5 (lower is better)
Translates to: VGGLSIGGAMTVLGRHLAISLKG*RRLRRN
Trigger: GTTCCTGCGCAGCCTCCGCAAACCCTTCAGTGATAT...AGCCAGATGCCTCCCCAAGACTGTCATTGCCCCTCCGATGCTGAGGCCACCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CAA 90 bp GTGGGTGGCCTCAGCATCGGAGGGGCAATGACAGTCTTGGGGAGGCATCTGGCTATCTTCTGCAGCAGCTaGGGGAAGAGGTACTGGGCA +
Preference number: 5 (lower is better)
Translates to: VGGLSIGGAMTVLGRHLAIFCSS*GKRYWA
Trigger: TGCCCAGTACCTCTTCCCCAAGCTGCTGCAGAAGAT...AGCCAGATGCCTCCCCAAGACTGTCATTGCCCCTCCGATGCTGAGGCCACCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CAA 90 bp CCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAACCAGTTCGGTTTCGGTCTTCTaGATCCGCTGCATCATCTGG +
Preference number: 5 (lower is better)
Translates to: PSSGQCRGPSATLAWQTSSVSVF*IRCIIW
Trigger: CCAGATGATGCAGCGGATCAAGAAGACCGAAACCGA...ACTGGTTTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CAA 90 bp CGTGGGACTCTGCTGCTCCAGGCCGGGTGCTCAAGGGCTGGTCAATGGAAAAGTGGGCCATCAGCAACATaGGCCTGGCAAACCAGTGTG +
Preference number: 5 (lower is better)
Translates to: RGTLLLQAGCSRAGQWKSGPSAT*AWQTSV
Trigger: CACACTGGTTTGCCAGGCCAATGTTGCTGATGGCCC...ACTTTTCCATTGACCAGCCCTTGAGCACCCGGCCTGGAGCAGCAGAGTCCCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS TCA 90 bp CGCCACACCTGCAGGCCCAGTCATAGCTCTGGCATCGTCTGGGTCTaGACGCAGATGGACCTCTACAGGGTGGTTCCCATCAGCCTTGAA +
Preference number: 5 (lower is better)
Translates to: RHTCRPSHSSGIVWV*TQMDLYRVVPISLE
Trigger: TTCAAGGCTGATGGGAACCACCCTGTAGAGGTCCATCTGCGTTCAGACCCAGACGATGCCAGAGCTATGACTGGGCCTGCAGGTGTGGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311565.4
ENST00000337400.6
CDS CCA 90 bp GCAGGCCCAGTCATAGCTCTGGCATCGTCTGGGTCTGAACGCAGATaGACCTCTACAGGGTGGTTCCCATCAGCCTCGTTGGTGCATCTG +
Preference number: 5 (lower is better)
Translates to: AGPVIALASSGSERR*TSTGWFPSASLVHL
Trigger: CAGATGCACCAACGAGGCTGATGGGAACCACCCTGTAGAGGTCCATCTGCGTTCAGACCCAGACGATGCCAGAGCTATGACTGGGCCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360694.8
ENST00000418635.6
CDS-3UTR CAA 90 bp GCAGAGAGTGATCCTGGGGCATGGAAGGGAGGCTGCAGCGCCCGTAGGGGCAGGCTGCGGGCCTTCTTTTaGGTCATGTTGAAGTTTTTC +
Preference number: 5 (lower is better)
Translates to: AESDPGAWKGGCSARRGRLRAFF*VMLKFF
Trigger: GAAAAACTTCAACATGACCAAAAAGAAGGCCCGCAG...CCTGCCCCTACGGGCGCTGCAGCCTCCCTTCCATGCCCCAGGATCACTCTCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CAA 90 bp CGTGGGACTCTGCTGCTCCAGGCCGGGTGCTCAAGGGCTGGTCAATGGAAAAGTTCGTGCACGCCATACTaGAGAAGGGTAACCTGGTCG +
Preference number: 5 (lower is better)
Translates to: RGTLLLQAGCSRAGQWKSSCTPY*RRVTWS
Trigger: CGACCAGGTTACCCTTCTCAAGTATGGCGTGCACGA...ACTTTTCCATTGACCAGCCCTTGAGCACCCGGCCTGGAGCAGCAGAGTCCCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CAA 90 bp AGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAACCAGTGTGAAGTCGTGCACGCCATACTaGAGAAGGGTAACCTGGTCG +
Preference number: 5 (lower is better)
Translates to: SGQCRGPSATLAWQTSVKSCTPY*RRVTWS
Trigger: CGACCAGGTTACCCTTCTCAAGTATGGCGTGCACGA...CTTCACACTGGTTTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CAA 90 bp CATGTTCCACTGCCAAGATCACAGGGACACTTCCCCACACTGTCAGAGCTCAGGACAAAGCCACTGCCGTaGGCTACCAGCAGCCCGTCC +
Preference number: 5 (lower is better)
Translates to: HVPLPRSQGHFPTLSELRTKPLP*ATSSPS
Trigger: GGACGGGCTGCTGGTAGCCAACGGCAGTGGCTTTGT...CCTGAGCTCTGACAGTGTGGGGAAGTGTCCCTGTGATCTTGGCAGTGGAACATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337400.6
CDS-3UTR CAA 90 bp AGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAACCAGTGTGAAGATATCACTGAAGGGTTaGCGGAGGCTGCGCAGGAAC +
Preference number: 5 (lower is better)
Translates to: SGQCRGPSATLAWQTSVKISLKG*RRLRRN
Trigger: GTTCCTGCGCAGCCTCCGCAAACCCTTCAGTGATAT...CTTCACACTGGTTTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CAA 90 bp CGTGGGACTCTGCTGCTCCAGGCCGGGTGCTCAAGGGCTGGTCAATGGAAAAGTATCTTCTGCAGCAGCTaGGGGAAGAGGTACTGGGCA +
Preference number: 5 (lower is better)
Translates to: RGTLLLQAGCSRAGQWKSIFCSS*GKRYWA
Trigger: TGCCCAGTACCTCTTCCCCAAGCTGCTGCAGAAGAT...ACTTTTCCATTGACCAGCCCTTGAGCACCCGGCCTGGAGCAGCAGAGTCCCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CAA 90 bp CTACTTCCAAGCTGGGAGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAGGGCAGTAGAGCTATaGGGACAAATGGACATCAGA +
Preference number: 5 (lower is better)
Translates to: LLPSWESAVQRPVQGAISRAVEL*GQMDIR
Trigger: TCTGATGTCCATTTGTCCCAATAGCTCTACTGCCCT...GCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCTCCCAGCTTGGAAGTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS CCA 90 bp GCAGGCCCAGTCATAGCTCTGGCATCGTCTGGGTCTGAACGCAGATaGACCTCTACAGGGTGGTTCCCATCAGCCTTGAAGCAGTCCTGT +
Preference number: 5 (lower is better)
Translates to: AGPVIALASSGSERR*TSTGWFPSALKQSC
Trigger: ACAGGACTGCTTCAAGGCTGATGGGAACCACCCTGTAGAGGTCCATCTGCGTTCAGACCCAGACGATGCCAGAGCTATGACTGGGCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311565.4
ENST00000337400.6
CDS CCA 90 bp ATGGCGAAGATGGCCTCGTGCACGCCATACTTGAGAAGGGTAACCTaGTCGTTGAGGAAGAGGCTGCTGAAGCTGGGGATGCTCTTGGCG +
Preference number: 5 (lower is better)
Translates to: MAKMASCTPYLRRVT*SLRKRLLKLGMLLA
Trigger: CGCCAAGAGCATCCCCAGCTTCAGCAGCCTCTTCCTCAACGACCAGGTTACCCTTCTCAAGTATGGCGTGCACGAGGCCATCTTCGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311565.4
ENST00000337400.6
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CAA 90 bp CAAGATCACAGGGACACTTCCCCACACTGTCAGAGCTCAGGCACAGTGCCCTGCCCAAAACGGATAGCGTaGTGTGACATGCCCAGTGCC +
Preference number: 5 (lower is better)
Translates to: QDHRDTSPHCQSSGTVPCPKRIA*CDMPSA
Trigger: GGCACTGGGCATGTCACACAACGCTATCCGTTTTGG...GCAGGGCACTGTGCCTGAGCTCTGACAGTGTGGGGAAGTGTCCCTGTGATCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337400.6
CDS-3UTR CAA 90 bp GGGCCCACCTGGAGGGAACCCTGCCTACTTCCAAGCTGGGAGAGTGCCGTCCAGCTGCGGGCCTTCTTTTaGGTCATGTTGAAGTTTTTC +
Preference number: 5 (lower is better)
Translates to: GPTWREPCLLPSWESAVQLRAFF*VMLKFF
Trigger: GAAAAACTTCAACATGACCAAAAAGAAGGCCCGCAG...CTGGACGGCACTCTCCCAGCTTGGAAGTAGGCAGGGTTCCCTCCAGGTGGGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CAA 90 bp CTACTTCCAAGCTGGGAGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCCTGCGGGCCTTCTTTTaGGTCATGTTGAAGTTTTTC +
Preference number: 5 (lower is better)
Translates to: LLPSWESAVQRPVQGAISLRAFF*VMLKFF
Trigger: GAAAAACTTCAACATGACCAAAAAGAAGGCCCGCAG...GCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCTCCCAGCTTGGAAGTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CAA 90 bp CAAGATCACAGGGACACTTCCCCACACTGTCAGAGCTCAGGCACAGTGCCCTGCTCGTGCACGCCATACTaGAGAAGGGTAACCTGGTCG +
Preference number: 5 (lower is better)
Translates to: QDHRDTSPHCQSSGTVPCSCTPY*RRVTWS
Trigger: CGACCAGGTTACCCTTCTCAAGTATGGCGTGCACGA...GCAGGGCACTGTGCCTGAGCTCTGACAGTGTGGGGAAGTGTCCCTGTGATCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337400.6
CDS-3UTR CAA 90 bp GCAGAGAGTGATCCTGGGGCATGGAAGGGAGGCTGCAGCGCCCGTAGGGGCAGGTCCAGGGCGTTGAACTaGACAGCAAATTCAAACTTA +
Preference number: 5 (lower is better)
Translates to: AESDPGAWKGGCSARRGRSRALN*TANSNL
Trigger: TAAGTTTGAATTTGCTGTCAAGTTCAACGCCCTGGA...CCTGCCCCTACGGGCGCTGCAGCCTCCCTTCCATGCCCCAGGATCACTCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CAA 90 bp CTACTTCCAAGCTGGGAGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCTCAAGTTCCAGGGCGTaGAACTTGACAGCAAATTCA +
Preference number: 5 (lower is better)
Translates to: LLPSWESAVQRPVQGAISSSSRA*NLTANS
Trigger: TGAATTTGCTGTCAAGTTCAACGCCCTGGAACTTGA...GCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCTCCCAGCTTGGAAGTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CAA 90 bp TGGGAGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGTCAAGTTCCAGGGCGTaGAACTTGACAGCAAATTCA +
Preference number: 5 (lower is better)
Translates to: WESAVQRPVQGAISNIGLSSSRA*NLTANS
Trigger: TGAATTTGCTGTCAAGTTCAACGCCCTGGAACTTGA...CAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCTCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CAA 90 bp TCAAGGGCTGGTCAATGGAAAAGTCATGTGGGTGGGCCCCTCCAGTGCTGGCCCTCGGTTTCGGTCTTCTaGATCCGCTGCATCATCTGG +
Preference number: 5 (lower is better)
Translates to: SRAGQWKSHVGGPLQCWPSVSVF*IRCIIW
Trigger: CCAGATGATGCAGCGGATCAAGAAGACCGAAACCGA...GGGCCAGCACTGGAGGGGCCCACCCACATGACTTTTCCATTGACCAGCCCTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CAA 90 bp AGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAACCAGTGTGAAGTCGGTTTCGGTCTTCTaGATCCGCTGCATCATCTGG +
Preference number: 5 (lower is better)
Translates to: SGQCRGPSATLAWQTSVKSVSVF*IRCIIW
Trigger: CCAGATGATGCAGCGGATCAAGAAGACCGAAACCGA...CTTCACACTGGTTTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CAA 90 bp CGTGGGACTCTGCTGCTCCAGGCCGGGTGCTCAAGGGCTGGTCAATGGAAAAGTTCGGTTTCGGTCTTCTaGATCCGCTGCATCATCTGG +
Preference number: 5 (lower is better)
Translates to: RGTLLLQAGCSRAGQWKSSVSVF*IRCIIW
Trigger: CCAGATGATGCAGCGGATCAAGAAGACCGAAACCGA...ACTTTTCCATTGACCAGCCCTTGAGCACCCGGCCTGGAGCAGCAGAGTCCCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CAA 90 bp CCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAACCAGTAGGGCAGTAGAGCTATaGGGACAAATGGACATCAGA +
Preference number: 5 (lower is better)
Translates to: PSSGQCRGPSATLAWQTSRAVEL*GQMDIR
Trigger: TCTGATGTCCATTTGTCCCAATAGCTCTACTGCCCT...ACTGGTTTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CAA 90 bp CGTGGGACTCTGCTGCTCCAGGCCGGGTGCTCAAGGGCTGGTCAATGGAAAAGTTGGTTCCCATCAGCCTaGAAGCAGTCCTGTAGAGAT +
Preference number: 5 (lower is better)
Translates to: RGTLLLQAGCSRAGQWKSWFPSA*KQSCRD
Trigger: ATCTCTACAGGACTGCTTCAAGGCTGATGGGAACCA...ACTTTTCCATTGACCAGCCCTTGAGCACCCGGCCTGGAGCAGCAGAGTCCCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311565.4
CDS-3UTR CAA 90 bp AAGGGGAGGGCAGTAGAGCTATTGGGACAAATGGACATCAGAATGAACAGGCTCACCCGGCACTCCATGTaGAGGCTGCCGCATGAGGCC +
Preference number: 5 (lower is better)
Translates to: KGRAVELLGQMDIRMNRLTRHSM*RLPHEA
Trigger: GGCCTCATGCGGCAGCCTCAACATGGAGTGCCGGGT...GAGCCTGTTCATTCTGATGTCCATTTGTCCCAATAGCTCTACTGCCCTCCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000448077.6
CDS-3UTR CAA 90 bp TCAAGGGCTGGTCAATGGAAAAGTCATGTGGGTGGGCCCCTCCAGTGCTGGCCCTTCCCATCAGCCTCGTaGGTGCATCTGTCTTCATCT +
Preference number: 5 (lower is better)
Translates to: SRAGQWKSHVGGPLQCWPFPSAS*VHLSSS
Trigger: AGATGAAGACAGATGCACCAACGAGGCTGATGGGAA...GGGCCAGCACTGGAGGGGCCCACCCACATGACTTTTCCATTGACCAGCCCTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360694.8
ENST00000418635.6
CDS-3UTR CAA 90 bp GAAGGGAGGTGCATGGAGCCTGCAGGTAAAGTGATTTCAGTGCTTATGTGTGTGACAAAGCCACTGCCGTaGGCTACCAGCAGCCCGTCC +
Preference number: 5 (lower is better)
Translates to: EGRCMEPAGKVISVLMCVTKPLP*ATSSPS
Trigger: GGACGGGCTGCTGGTAGCCAACGGCAGTGGCTTTGT...CACACACATAAGCACTGAAATCACTTTACCTGCAGGCTCCATGCACCTCCCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CAA 90 bp AAGGGGAGGGCAGTAGAGCTATTGGGACAAATGGACATCAGAATGAACAGGCTCACAAAGCCACTGCCGTaGGCTACCAGCAGCCCGTCC +
Preference number: 5 (lower is better)
Translates to: KGRAVELLGQMDIRMNRLTKPLP*ATSSPS
Trigger: GGACGGGCTGCTGGTAGCCAACGGCAGTGGCTTTGT...GAGCCTGTTCATTCTGATGTCCATTTGTCCCAATAGCTCTACTGCCCTCCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CAA 90 bp GAGGGAACCCTGCCTACTTCCAAGCTGGGAGAGTGCCGTCCAGCGGCCAGTGCATCCAGGGCGTTGAACTaGACAGCAAATTCAAACTTA +
Preference number: 5 (lower is better)
Translates to: EGTLPTSKLGECRPAASASRALN*TANSNL
Trigger: TAAGTTTGAATTTGCTGTCAAGTTCAACGCCCTGGA...TGCACTGGCCGCTGGACGGCACTCTCCCAGCTTGGAAGTAGGCAGGGTTCCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CAA 90 bp GTGGGTGGCCTCAGCATCGGAGGGGCAATGACAGTCTTGGGGAGGCATCTGGCTTCAAGTTCCAGGGCGTaGAACTTGACAGCAAATTCA +
Preference number: 5 (lower is better)
Translates to: VGGLSIGGAMTVLGRHLASSSRA*NLTANS
Trigger: TGAATTTGCTGTCAAGTTCAACGCCCTGGAACTTGA...AGCCAGATGCCTCCCCAAGACTGTCATTGCCCCTCCGATGCTGAGGCCACCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CAA 90 bp AGAGTGCCGTCCAGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAGAGCTTAGTGTTTCTTaGGATGGCTCAAGTCTTTTG +
Preference number: 5 (lower is better)
Translates to: RVPSSGQCRGPSATLAWQELSVS*DGSSLL
Trigger: CAAAAGACTTGAGCCATCCAAAGAAACACTAAGCTC...TTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCTGGACGGCACTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CAA 90 bp GAAGGGAGGTGCATGGAGCCTGCAGGTAAAGTGATTTCAGTGCTTATGTGTGTGTCGGCCACCTGTGGGTaGTACTGGCTCCCCTCGTTT +
Preference number: 5 (lower is better)
Translates to: EGRCMEPAGKVISVLMCVSATCG*YWLPSF
Trigger: AAACGAGGGGAGCCAGTACAACCCACAGGTGGCCGA...CACACACATAAGCACTGAAATCACTTTACCTGCAGGCTCCATGCACCTCCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CAA 90 bp AGTGCCTTGCATGTTCCACTGCCAAGATCACAGGGACACTTCCCCACACTGTCAAGGGTAACCTGGTCGTaGAGGAAGAGGCTGCTGAAG +
Preference number: 5 (lower is better)
Translates to: SALHVPLPRSQGHFPTLSRVTWS*RKRLLK
Trigger: CTTCAGCAGCCTCTTCCTCAACGACCAGGTTACCCT...TGACAGTGTGGGGAAGTGTCCCTGTGATCTTGGCAGTGGAACATGCAAGGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337400.6
CDS-3UTR CAA 90 bp AGTGCCTTGCATGTTCCACTGCCAAGATCACAGGGACACTTCCCCACACTGTCAATATCACTGAAGGGTTaGCGGAGGCTGCGCAGGAAC +
Preference number: 5 (lower is better)
Translates to: SALHVPLPRSQGHFPTLSISLKG*RRLRRN
Trigger: GTTCCTGCGCAGCCTCCGCAAACCCTTCAGTGATAT...TGACAGTGTGGGGAAGTGTCCCTGTGATCTTGGCAGTGGAACATGCAAGGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337400.6
CDS-3UTR CAA 90 bp AGCGGCCAGTGCAGGGGGCCATCAGCAACATTGGCCTGGCAAACCAGTGTGAAGTCAAGTTCCAGGGCGTaGAACTTGACAGCAAATTCA +
Preference number: 5 (lower is better)
Translates to: SGQCRGPSATLAWQTSVKSSSRA*NLTANS
Trigger: TGAATTTGCTGTCAAGTTCAACGCCCTGGAACTTGA...CTTCACACTGGTTTGCCAGGCCAATGTTGCTGATGGCCCCCTGCACTGGCCGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CAA 90 bp GAAGGGAGGTGCATGGAGCCTGCAGGTAAAGTGATTTCAGTGCTTATGTGTGTGGGGGCAATGACAGTCTaGGGGAGGCATCTGGCTCTC +
Preference number: 5 (lower is better)
Translates to: EGRCMEPAGKVISVLMCVGAMTV*GRHLAL
Trigger: GAGAGCCAGATGCCTCCCCAAGACTGTCATTGCCCC...CACACACATAAGCACTGAAATCACTTTACCTGCAGGCTCCATGCACCTCCCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CAA 90 bp GAAGGGAGGTGCATGGAGCCTGCAGGTAAAGTGATTTCAGTGCTTATGTGTGTGCCAGGAAGCCTGGGCTaGAACCCCAGTTCTCCTACC +
Preference number: 5 (lower is better)
Translates to: EGRCMEPAGKVISVLMCVPGSLG*NPSSPT
Trigger: GGTAGGAGAACTGGGGTTCAAGCCCAGGCTTCCTGG...CACACACATAAGCACTGAAATCACTTTACCTGCAGGCTCCATGCACCTCCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CAA 90 bp CTCAGTCAGTGCCTTGCATGTTCCACTGCCAAGATCACAGGGACACTTCCCCACTGGTTCCCATCAGCCTaGAAGCAGTCCTGTAGAGAT +
Preference number: 5 (lower is better)
Translates to: LSQCLACSTAKITGTLPHWFPSA*KQSCRD
Trigger: ATCTCTACAGGACTGCTTCAAGGCTGATGGGAACCA...GTGGGGAAGTGTCCCTGTGATCTTGGCAGTGGAACATGCAAGGCACTGACTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337400.6
CDS-3UTR CAA 90 bp AAGGGGAGGGCAGTAGAGCTATTGGGACAAATGGACATCAGAATGAACAGGCTCAGCAGCCCGTCCTTGTaGACGATAGAGGCCAGCATG +
Preference number: 5 (lower is better)
Translates to: KGRAVELLGQMDIRMNRLSSPSL*TIEASM
Trigger: CATGCTGGCCTCTATCGTCAACAAGGACGGGCTGCT...GAGCCTGTTCATTCTGATGTCCATTTGTCCCAATAGCTCTACTGCCCTCCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CAA 90 bp TCAAGGGCTGGTCAATGGAAAAGTCATGTGGGTGGGCCCCTCCAGTGCTGGCCCGAGCTTAGTGTTTCTTaGGATGGCTCAAGTCTTTTG +
Preference number: 5 (lower is better)
Translates to: SRAGQWKSHVGGPLQCWPELSVS*DGSSLL
Trigger: CAAAAGACTTGAGCCATCCAAAGAAACACTAAGCTC...GGGCCAGCACTGGAGGGGCCCACCCACATGACTTTTCCATTGACCAGCCCTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CAA 90 bp AACCCCCATCAGCTGGGTAGGTGGGGAGCGGGAAGAATCCTGCCAGCAGAGAGTGAGCTTAGTGTTTCTTaGGATGGCTCAAGTCTTTTG +
Preference number: 5 (lower is better)
Translates to: NPHQLGRWGAGRILPAESELSVS*DGSSLL
Trigger: CAAAAGACTTGAGCCATCCAAAGAAACACTAAGCTC...ACTCTCTGCTGGCAGGATTCTTCCCGCTCCCCACCTACCCAGCTGATGGGGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CAA 90 bp AAGGGGAGGGCAGTAGAGCTATTGGGACAAATGGACATCAGAATGAACAGGCTCGGGCCATCAGCAACATaGGCCTGGCAAACCAGTGTG +
Preference number: 5 (lower is better)
Translates to: KGRAVELLGQMDIRMNRLGPSAT*AWQTSV
Trigger: CACACTGGTTTGCCAGGCCAATGTTGCTGATGGCCC...GAGCCTGTTCATTCTGATGTCCATTTGTCCCAATAGCTCTACTGCCCTCCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CAA 90 bp AAGGGGAGGGCAGTAGAGCTATTGGGACAAATGGACATCAGAATGAACAGGCTCGTCCTAGGGGCAGAATaGGGTGTGCTGCTTCCTCCA +
Preference number: 5 (lower is better)
Translates to: KGRAVELLGQMDIRMNRLVLGAE*GVLLPP
Trigger: TGGAGGAAGCAGCACACCCAATTCTGCCCCTAGGAC...GAGCCTGTTCATTCTGATGTCCATTTGTCCCAATAGCTCTACTGCCCTCCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CAA 90 bp GAAGGGAGGTGCATGGAGCCTGCAGGTAAAGTGATTTCAGTGCTTATGTGTGTGATATCACTGAAGGGTTaGCGGAGGCTGCGCAGGAAC +
Preference number: 5 (lower is better)
Translates to: EGRCMEPAGKVISVLMCVISLKG*RRLRRN
Trigger: GTTCCTGCGCAGCCTCCGCAAACCCTTCAGTGATAT...CACACACATAAGCACTGAAATCACTTTACCTGCAGGCTCCATGCACCTCCCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CAA 90 bp GAAGGGAGGTGCATGGAGCCTGCAGGTAAAGTGATTTCAGTGCTTATGTGTGTGATCTTCTGCAGCAGCTaGGGGAAGAGGTACTGGGCA +
Preference number: 5 (lower is better)
Translates to: EGRCMEPAGKVISVLMCVIFCSS*GKRYWA
Trigger: TGCCCAGTACCTCTTCCCCAAGCTGCTGCAGAAGAT...CACACACATAAGCACTGAAATCACTTTACCTGCAGGCTCCATGCACCTCCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CAA 90 bp GAAGGGAGGTGCATGGAGCCTGCAGGTAAAGTGATTTCAGTGCTTATGTGTGTGCATTCCAGACCCTCGTaGGTGCATCTGTCTTCATCT +
Preference number: 5 (lower is better)
Translates to: EGRCMEPAGKVISVLMCVHSRPS*VHLSSS
Trigger: AGATGAAGACAGATGCACCAACGAGGGTCTGGAATG...CACACACATAAGCACTGAAATCACTTTACCTGCAGGCTCCATGCACCTCCCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311565.4
CDS-3UTR CAA 90 bp GAAGGGAGGTGCATGGAGCCTGCAGGTAAAGTGATTTCAGTGCTTATGTGTGTGTTCCCATCAGCCTCGTaGGTGCATCTGTCTTCATCT +
Preference number: 5 (lower is better)
Translates to: EGRCMEPAGKVISVLMCVFPSAS*VHLSSS
Trigger: AGATGAAGACAGATGCACCAACGAGGCTGATGGGAA...CACACACATAAGCACTGAAATCACTTTACCTGCAGGCTCCATGCACCTCCCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360694.8
ENST00000418635.6
CDS-3UTR CAA 90 bp TCTGGCTTAGTCTTTTTCCTGTCTCCACCTCTATCTACGTACATAATGAGATGGAGCAGCCCGTCCTTGTaGACGATAGAGGCCAGCATG +
Preference number: 5 (lower is better)
Translates to: SGLVFFLSPPLSTYIMRWSSPSL*TIEASM
Trigger: CATGCTGGCCTCTATCGTCAACAAGGACGGGCTGCT...CCATCTCATTATGTACGTAGATAGAGGTGGAGACAGGAAAAAGACTAAGCCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337400.6
CDS-3UTR CAA 90 bp GAAGGGAGGTGCATGGAGCCTGCAGGTAAAGTGATTTCAGTGCTTATGTGTGTGAGGGCAGTAGAGCTATaGGGACAAATGGACATCAGA +
Preference number: 5 (lower is better)
Translates to: EGRCMEPAGKVISVLMCVRAVEL*GQMDIR
Trigger: TCTGATGTCCATTTGTCCCAATAGCTCTACTGCCCT...CACACACATAAGCACTGAAATCACTTTACCTGCAGGCTCCATGCACCTCCCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CAA 90 bp ACCTCTATCTACGTACATAATGAGATGGAGCTGATCCTGCATGCTCAGTCAGTGCATTCCAGACCCTCGTaGGTGCATCTGTCTTCATCT +
Preference number: 5 (lower is better)
Translates to: TSIYVHNEMELILHAQSVHSRPS*VHLSSS
Trigger: AGATGAAGACAGATGCACCAACGAGGGTCTGGAATG...CACTGACTGAGCATGCAGGATCAGCTCCATCTCATTATGTACGTAGATAGAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337400.6
CDS-3UTR CAA 90 bp AAGGGGAGGGCAGTAGAGCTATTGGGACAAATGGACATCAGAATGAACAGGCTCTCCAGGGCGTTGAACTaGACAGCAAATTCAAACTTA +
Preference number: 5 (lower is better)
Translates to: KGRAVELLGQMDIRMNRLSRALN*TANSNL
Trigger: TAAGTTTGAATTTGCTGTCAAGTTCAACGCCCTGGA...GAGCCTGTTCATTCTGATGTCCATTTGTCCCAATAGCTCTACTGCCCTCCCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CAA 90 bp GAAGGGAGGTGCATGGAGCCTGCAGGTAAAGTGATTTCAGTGCTTATGTGTGTGTCCAGGGCGTTGAACTaGACAGCAAATTCAAACTTA +
Preference number: 5 (lower is better)
Translates to: EGRCMEPAGKVISVLMCVSRALN*TANSNL
Trigger: TAAGTTTGAATTTGCTGTCAAGTTCAACGCCCTGGA...CACACACATAAGCACTGAAATCACTTTACCTGCAGGCTCCATGCACCTCCCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CAA 90 bp ACCTCTATCTACGTACATAATGAGATGGAGCTGATCCTGCATGCTCAGTCAGTGTCAAGTTCCAGGGCGTaGAACTTGACAGCAAATTCA +
Preference number: 5 (lower is better)
Translates to: TSIYVHNEMELILHAQSVSSSRA*NLTANS
Trigger: TGAATTTGCTGTCAAGTTCAACGCCCTGGAACTTGA...CACTGACTGAGCATGCAGGATCAGCTCCATCTCATTATGTACGTAGATAGAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337400.6
CDS-3UTR CAA 90 bp AATATACATTTCAATTTTGGAGATTGTTCAGACACTGAGAAGAGCTGTATCCTCGGGGCAATGACAGTCTaGGGGAGGCATCTGGCTCTC +
Preference number: 5 (lower is better)
Translates to: NIHFNFGDCSDTEKSCILGAMTV*GRHLAL
Trigger: GAGAGCCAGATGCCTCCCCAAGACTGTCATTGCCCC...GAGGATACAGCTCTTCTCAGTGTCTGAACAATCTCCAAAATTGAAATGTATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CAA 90 bp CACGTCTGGCTTAGTCTTTTTCCTGTCTCCACCTCTATCTACGTACATAATGAGCTGCGGGCCTTCTTTTaGGTCATGTTGAAGTTTTTC +
Preference number: 5 (lower is better)
Translates to: HVWLSLFPVSTSIYVHNELRAFF*VMLKFF
Trigger: GAAAAACTTCAACATGACCAAAAAGAAGGCCCGCAG...CTCATTATGTACGTAGATAGAGGTGGAGACAGGAAAAAGACTAAGCCAGACGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000337400.6
CDS-3UTR CAA 90 bp AATATACATTTCAATTTTGGAGATTGTTCAGACACTGAGAAGAGCTGTATCCTCCCAAAACGGATAGCGTaGTGTGACATGCCCAGTGCC +
Preference number: 5 (lower is better)
Translates to: NIHFNFGDCSDTEKSCILPKRIA*CDMPSA
Trigger: GGCACTGGGCATGTCACACAACGCTATCCGTTTTGG...GAGGATACAGCTCTTCTCAGTGTCTGAACAATCTCCAAAATTGAAATGTATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000448077.6
CDS-3UTR CAA 90 bp AATATACATTTCAATTTTGGAGATTGTTCAGACACTGAGAAGAGCTGTATCCTCAGGGTAACCTGGTCGTaGAGGAAGAGGCTGCTGAAG +
Preference number: 5 (lower is better)
Translates to: NIHFNFGDCSDTEKSCILRVTWS*RKRLLK
Trigger: CTTCAGCAGCCTCTTCCTCAACGACCAGGTTACCCT...GAGGATACAGCTCTTCTCAGTGTCTGAACAATCTCCAAAATTGAAATGTATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CAA 90 bp AATATACATTTCAATTTTGGAGATTGTTCAGACACTGAGAAGAGCTGTATCCTCATCTTCTGCAGCAGCTaGGGGAAGAGGTACTGGGCA +
Preference number: 5 (lower is better)
Translates to: NIHFNFGDCSDTEKSCILIFCSS*GKRYWA
Trigger: TGCCCAGTACCTCTTCCCCAAGCTGCTGCAGAAGAT...GAGGATACAGCTCTTCTCAGTGTCTGAACAATCTCCAAAATTGAAATGTATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS-3UTR CAA 90 bp TCTGGCTTAGTCTTTTTCCTGTCTCCACCTCTATCTACGTACATAATGAGATGGTCCAGGGCGTTGAACTaGACAGCAAATTCAAACTTA +
Preference number: 5 (lower is better)
Translates to: SGLVFFLSPPLSTYIMRWSRALN*TANSNL
Trigger: TAAGTTTGAATTTGCTGTCAAGTTCAACGCCCTGGA...CCATCTCATTATGTACGTAGATAGAGGTGGAGACAGGAAAAAGACTAAGCCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337400.6
CDS CCA 72 bp CTGCCGCATGAGGCCCCGTCACAGCCCATCTGCAGTTaGTCCAGCAGTGAGGGTGGCGAGGAGCTCCGGGAG +
Preference number: 6 (lower is better)
Translates to: LPHEAPSQPICS*SSSEGGEELRE
Trigger: CTCCCGGAGCTCCTCGCCACCCTCACTGCTGGACCAACTGCAGATGGGCTGTGACGGGGCCTCATGCGGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000337400.6
ENST00000360694.8
ENST00000448077.6
CDS TCA 72 bp CCCGCACACCCGGCACTCCATGTTGAGGCTGCCGCATaGGGCCCCGTCACAGCCCATCTGCAGTTGGTCCAG +
Preference number: 6 (lower is better)
Translates to: PAHPALHVEAAA*GPVTAHLQLVQ
Trigger: CTGGACCAACTGCAGATGGGCTGTGACGGGGCCTCATGCGGCAGCCTCAACATGGAGTGCCGGGTGTGCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000337400.6
ENST00000360694.8
ENST00000448077.6
CDS GCA 72 bp TCCTCTTCCCGGACCTCAGGGGCTTCCTCCTGTGGCTaGTCCATGGCTGATCTCCCCTCGGCGCCACACCTG +
Preference number: 6 (lower is better)
Translates to: SSSRTSGASSCG*SMADLPSAPHL
Trigger: CAGGTGTGGCGCCGAGGGGAGATCAGCCATGGAGCAGCCACAGGAGGAAGCCCCTGAGGTCCGGGAAGAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000337400.6
ENST00000360694.8
ENST00000418635.6
CDS GCA 72 bp GCTGCTCCATGGCTGATCTCCCCTCGGCGCCACACCTaGAGGCCCAGTCATAGCTCTGGCATCGTCTGGGTC +
Preference number: 6 (lower is better)
Translates to: AAPWLISPRRHT*RPSHSSGIVWV
Trigger: GACCCAGACGATGCCAGAGCTATGACTGGGCCTGCAGGTGTGGCGCCGAGGGGAGATCAGCCATGGAGCAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000337400.6
ENST00000360694.8
ENST00000418635.6
CDS CCA 72 bp GAGAAGGCCTTCAGGTCGGCCACCTGTGGGTTGTACTaGCTCCCCTCGTTTGCAGTCAGCCCTGCCACCAGC +
Preference number: 6 (lower is better)
Translates to: EKAFRSATCGLY*LPSFAVSPATS
Trigger: GCTGGTGGCAGGGCTGACTGCAAACGAGGGGAGCCAGTACAACCCACAGGTGGCCGACCTGAAGGCCTTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311565.4
ENST00000337400.6
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS CAA 90 bp AGGCCTTCAGGTCGGCCACCTGTGGGTTGTACTGGCTCCCCTCGTTaGCAGTCAGCCCTGCCACCAGCTTCCTCTTCTCAGCCTCCGGCA +
Preference number: 6 (lower is better)
Translates to: RPSGRPPVGCTGSPR*QSALPPASSSQPPA
Trigger: TGCCGGAGGCTGAGAAGAGGAAGCTGGTGGCAGGGCTGACTGCAAACGAGGGGAGCCAGTACAACCCACAGGTGGCCGACCTGAAGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311565.4
ENST00000337400.6
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS CAA 90 bp TGCTCGGTGACCAGTTGCCGCAGGTCAGCCATCTTCTGCAGCAGCTaGGGGAAGAGGTACTGGGCATCAGGGTGGTTGGCCTGCAGGTGG +
Preference number: 6 (lower is better)
Translates to: CSVTSCRRSAIFCSS*GKRYWASGWLACRW
Trigger: CCACCTGCAGGCCAACCACCCTGATGCCCAGTACCTCTTCCCCAAGCTGCTGCAGAAGATGGCTGACCTGCGGCAACTGGTCACCGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS GCA 72 bp TGGGTTGTACTGGCTCCCCTCGTTTGCAGTCAGCCCTaGCACCAGCTTCCTCTTCTCAGCCTCCGGCATCCG +
Preference number: 6 (lower is better)
Translates to: WVVLAPLVCSQP*HQLPLLSLRHP
Trigger: CGGATGCCGGAGGCTGAGAAGAGGAAGCTGGTGGCAGGGCTGACTGCAAACGAGGGGAGCCAGTACAACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311565.4
ENST00000337400.6
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS CCA 72 bp GCAGCTTGGGGAAGAGGTACTGGGCATCAGGGTGGTTaGCCTGCAGGTGGAATTCGAGGGCACGCAGGATGG +
Preference number: 6 (lower is better)
Translates to: AAWGRGTGHQGG*PAGGIRGHAGW
Trigger: CCATCCTGCGTGCCCTCGAATTCCACCTGCAGGCCAACCACCCTGATGCCCAGTACCTCTTCCCCAAGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS CCA 72 bp TGCAGCAGCTTGGGGAAGAGGTACTGGGCATCAGGGTaGTTGGCCTGCAGGTGGAATTCGAGGGCACGCAGG +
Preference number: 6 (lower is better)
Translates to: CSSLGKRYWASG*LACRWNSRARR
Trigger: CCTGCGTGCCCTCGAATTCCACCTGCAGGCCAACCACCCTGATGCCCAGTACCTCTTCCCCAAGCTGCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS CAA 72 bp GGTCGGCCACCTGTGGGTTGTACTGGCTCCCCTCGTTaGCAGTCAGCCCTGCCACCAGCTTCCTCTTCTCAG +
Preference number: 6 (lower is better)
Translates to: GRPPVGCTGSPR*QSALPPASSSQ
Trigger: CTGAGAAGAGGAAGCTGGTGGCAGGGCTGACTGCAAACGAGGGGAGCCAGTACAACCCACAGGTGGCCGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311565.4
ENST00000337400.6
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS CAA 72 bp GATCCGCTGCATCATCTGGGCGTGCTCGGTGACCAGTaGCCGCAGGTCAGCCATCTTCTGCAGCAGCTTGGG +
Preference number: 6 (lower is better)
Translates to: DPLHHLGVLGDQ*PQVSHLLQQLG
Trigger: CCCAAGCTGCTGCAGAAGATGGCTGACCTGCGGCAACTGGTCACCGAGCACGCCCAGATGATGCAGCGGATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS CAA 90 bp TTGCGGAGGCTGCGCAGGAACTCACGGGTGACAAAGCCACTGCCGTaGGCTACCAGCAGCCCGTCCTTGTTGACGATAGAGGCCAGCATG +
Preference number: 6 (lower is better)
Translates to: LRRLRRNSRVTKPLP*ATSSPSLLTIEASM
Trigger: CATGCTGGCCTCTATCGTCAACAAGGACGGGCTGCTGGTAGCCAACGGCAGTGGCTTTGTCACCCGTGAGTTCCTGCGCAGCCTCCGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311565.4
ENST00000337400.6
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS CAA 90 bp ATCTCCTGGAGCAGAGGGTGCAGCGAGGTCTCGGTTTCGGTCTTCTaGATCCGCTGCATCATCTGGGCGTGCTCGGTGACCAGTTGCCGC +
Preference number: 6 (lower is better)
Translates to: ISWSRGCSEVSVSVF*IRCIIWACSVTSCR
Trigger: GCGGCAACTGGTCACCGAGCACGCCCAGATGATGCAGCGGATCAAGAAGACCGAAACCGAGACCTCGCTGCACCCTCTGCTCCAGGAGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS GCA 72 bp TTGGGGAAGAGGTACTGGGCATCAGGGTGGTTGGCCTaGAGGTGGAATTCGAGGGCACGCAGGATGGTGTCC +
Preference number: 6 (lower is better)
Translates to: LGKRYWASGWLA*RWNSRARRMVS
Trigger: GGACACCATCCTGCGTGCCCTCGAATTCCACCTGCAGGCCAACCACCCTGATGCCCAGTACCTCTTCCCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS CCA 72 bp GATGTGCTTGGAGAAGGCCTTCAGGTCGGCCACCTGTaGGTTGTACTGGCTCCCCTCGTTTGCAGTCAGCCC +
Preference number: 6 (lower is better)
Translates to: DVLGEGLQVGHL*VVLAPLVCSQP
Trigger: GGGCTGACTGCAAACGAGGGGAGCCAGTACAACCCACAGGTGGCCGACCTGAAGGCCTTCTCCAAGCACATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311565.4
ENST00000337400.6
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS CCA 72 bp AGCCCCTTCTCTGCCTGCCACAATGTCTCGATGTCGTaGATCACAAAGGGCGCCGTGTGGCTGGCTTTGCCG +
Preference number: 6 (lower is better)
Translates to: SPFSACHNVSMS*ITKGAVWLALP
Trigger: CGGCAAAGCCAGCCACACGGCGCCCTTTGTGATCCACGACATCGAGACATTGTGGCAGGCAGAGAAGGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311565.4
ENST00000337400.6
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS CCA 72 bp CCAGTTGCCGCAGGTCAGCCATCTTCTGCAGCAGCTTaGGGAAGAGGTACTGGGCATCAGGGTGGTTGGCCT +
Preference number: 6 (lower is better)
Translates to: PVAAGQPSSAAA*GRGTGHQGGWP
Trigger: AGGCCAACCACCCTGATGCCCAGTACCTCTTCCCCAAGCTGCTGCAGAAGATGGCTGACCTGCGGCAACTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS CAA 72 bp AGCAGCTTGGGGAAGAGGTACTGGGCATCAGGGTGGTaGGCCTGCAGGTGGAATTCGAGGGCACGCAGGATG +
Preference number: 6 (lower is better)
Translates to: SSLGKRYWASGW*ACRWNSRARRM
Trigger: CATCCTGCGTGCCCTCGAATTCCACCTGCAGGCCAACCACCCTGATGCCCAGTACCTCTTCCCCAAGCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS CAA 72 bp ACCAGTTGCCGCAGGTCAGCCATCTTCTGCAGCAGCTaGGGGAAGAGGTACTGGGCATCAGGGTGGTTGGCC +
Preference number: 6 (lower is better)
Translates to: TSCRRSAIFCSS*GKRYWASGWLA
Trigger: GGCCAACCACCCTGATGCCCAGTACCTCTTCCCCAAGCTGCTGCAGAAGATGGCTGACCTGCGGCAACTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS CAA 72 bp AGCAGAGGGTGCAGCGAGGTCTCGGTTTCGGTCTTCTaGATCCGCTGCATCATCTGGGCGTGCTCGGTGACC +
Preference number: 6 (lower is better)
Translates to: SRGCSEVSVSVF*IRCIIWACSVT
Trigger: GGTCACCGAGCACGCCCAGATGATGCAGCGGATCAAGAAGACCGAAACCGAGACCTCGCTGCACCCTCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS CCA 72 bp GAGGTCTGTGTAGCTGCTGGAAGGAAGTGCATGCTGTaGTCCCCCATTGAGCTCTGGGGCTCCTTCTGCCTC +
Preference number: 6 (lower is better)
Translates to: EVCVAAGRKCML*SPIELWGSFCL
Trigger: GAGGCAGAAGGAGCCCCAGAGCTCAATGGGGGACCACAGCATGCACTTCCTTCCAGCAGCTACACAGACCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311565.4
ENST00000337400.6
ENST00000360694.8
CDS CAA 72 bp ATGTCGTGGATCACAAAGGGCGCCGTGTGGCTGGCTTaGCCGGTGAGGATGCTGCGGGCCTTCTTTTTGGTC +
Preference number: 6 (lower is better)
Translates to: MSWITKGAVWLA*PVRMLRAFFLV
Trigger: GACCAAAAAGAAGGCCCGCAGCATCCTCACCGGCAAAGCCAGCCACACGGCGCCCTTTGTGATCCACGACAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000311565.4
ENST00000337400.6
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS CAA 72 bp CTGCGCAGGAACTCACGGGTGACAAAGCCACTGCCGTaGGCTACCAGCAGCCCGTCCTTGTTGACGATAGAG +
Preference number: 6 (lower is better)
Translates to: LRRNSRVTKPLP*ATSSPSLLTIE
Trigger: CTCTATCGTCAACAAGGACGGGCTGCTGGTAGCCAACGGCAGTGGCTTTGTCACCCGTGAGTTCCTGCGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311565.4
ENST00000337400.6
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS TCA 72 bp TGCAGGCCCAGTCATAGCTCTGGCATCGTCTGGGTCTaGACGCAGATGGACCTCTACAGGGTGGTTCCCATC +
Preference number: 6 (lower is better)
Translates to: CRPSHSSGIVWV*TQMDLYRVVPI
Trigger: GATGGGAACCACCCTGTAGAGGTCCATCTGCGTTCAGACCCAGACGATGCCAGAGCTATGACTGGGCCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000337400.6
ENST00000360694.8
ENST00000418635.6
CDS GCA 72 bp TGCAGCTGCGCTCACACTTCTCGTACTCCAGCTTCATaGGGATCGTACGACGGAAGAAGCCCTTGCACCCCT +
Preference number: 6 (lower is better)
Translates to: CSCAHTSRTPAS*GSYDGRSPCTP
Trigger: AGGGGTGCAAGGGCTTCTTCCGTCGTACGATCCGCATGAAGCTGGAGTACGAGAAGTGTGAGCGCAGCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000337400.6
ENST00000360694.8
ENST00000448077.6
CDS CCA 72 bp AAGAGGTACTGGGCATCAGGGTGGTTGGCCTGCAGGTaGAATTCGAGGGCACGCAGGATGGTGTCCTGGATA +
Preference number: 6 (lower is better)
Translates to: KRYWASGWLACR*NSRARRMVSWI
Trigger: TATCCAGGACACCATCCTGCGTGCCCTCGAATTCCACCTGCAGGCCAACCACCCTGATGCCCAGTACCTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS CCA 72 bp GATAGCTGTGTAGCTGCTGGAAGGAAGTGCATGCTGTaGTCCCCCATTGAGCTCTGGGGCTCCTTCTGCCTC +
Preference number: 6 (lower is better)
Translates to: DSCVAAGRKCML*SPIELWGSFCL
Trigger: GAGGCAGAAGGAGCCCCAGAGCTCAATGGGGGACCACAGCATGCACTTCCTTCCAGCAGCTACACAGCTATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418635.6
CDS CCA 72 bp ATGGCCTCGTGCACGCCATACTTGAGAAGGGTAACCTaGTCGTTGAGGAAGAGGCTGCTGAAGCTGGGGATG +
Preference number: 6 (lower is better)
Translates to: MASCTPYLRRVT*SLRKRLLKLGM
Trigger: CATCCCCAGCTTCAGCAGCCTCTTCCTCAACGACCAGGTTACCCTTCTCAAGTATGGCGTGCACGAGGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311565.4
ENST00000337400.6
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS CCA 72 bp GTCATAGCTCTGGCATCGTCTGGGTCTGAACGCAGATaGACCTCTACAGGGTGGTTCCCATCAGCCTCGTTG +
Preference number: 6 (lower is better)
Translates to: VIALASSGSERR*TSTGWFPSASL
Trigger: CAACGAGGCTGATGGGAACCACCCTGTAGAGGTCCATCTGCGTTCAGACCCAGACGATGCCAGAGCTATGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360694.8
ENST00000418635.6
CDS TCA 72 bp TCACTGCTCCACGGGCTTCAGTTTTCCAGGGGTATCTaGCCCTGCTTTCCAGACCACTCCAGACCATTCCAG +
Preference number: 6 (lower is better)
Translates to: SLLHGLQFSRGI*PCFPDHSRPFQ
Trigger: CTGGAATGGTCTGGAGTGGTCTGGAAAGCAGGGTCAGATACCCCTGGAAAACTGAAGCCCGTGGAGCAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311565.4
ENST00000337400.6
CDS CCA 72 bp GTCATAGCTCTGGCATCGTCTGGGTCTGAACGCAGATaGACCTCTACAGGGTGGTTCCCATCAGCCTTGAAG +
Preference number: 6 (lower is better)
Translates to: VIALASSGSERR*TSTGWFPSALK
Trigger: CTTCAAGGCTGATGGGAACCACCCTGTAGAGGTCCATCTGCGTTCAGACCCAGACGATGCCAGAGCTATGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311565.4
ENST00000337400.6
CDS CCA 72 bp TCGTCTGGGTCTGAACGCAGATGGACCTCTACAGGGTaGTTCCCATCAGCCTCGTTGGTGCATCTGTCTTCA +
Preference number: 6 (lower is better)
Translates to: SSGSERRWTSTG*FPSASLVHLSS
Trigger: TGAAGACAGATGCACCAACGAGGCTGATGGGAACCACCCTGTAGAGGTCCATCTGCGTTCAGACCCAGACGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360694.8
ENST00000418635.6
CDS CAA 72 bp TCGTGCACGCCATACTTGAGAAGGGTAACCTGGTCGTaGAGGAAGAGGCTGCTGAAGCTGGGGATGCTCTTG +
Preference number: 6 (lower is better)
Translates to: SCTPYLRRVTWS*RKRLLKLGMLL
Trigger: CAAGAGCATCCCCAGCTTCAGCAGCCTCTTCCTCAACGACCAGGTTACCCTTCTCAAGTATGGCGTGCACGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311565.4
ENST00000337400.6
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS CAA 90 bp TTGACAGCAAATTCAAACTTAGGCTCAATGATATCACTGAAGGGTTaGCGGAGGCTGCGCAGGAACTCACGGGTGACAAAGCCACTGCCG +
Preference number: 6 (lower is better)
Translates to: LTANSNLGSMISLKG*RRLRRNSRVTKPLP
Trigger: CGGCAGTGGCTTTGTCACCCGTGAGTTCCTGCGCAGCCTCCGCAAACCCTTCAGTGATATCATTGAGCCTAAGTTTGAATTTGCTGTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311565.4
ENST00000337400.6
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6
CDS GCA 72 bp AGTACTGGCACTTGTTGCGGTTCTTCTTCTGAATCTTaGAGCTGCGCTCACACTTCTCGTACTCCAGCTTCA +
Preference number: 6 (lower is better)
Translates to: STGTCCGSSSES*SCAHTSRTPAS
Trigger: TGAAGCTGGAGTACGAGAAGTGTGAGCGCAGCTGCAAGATTCAGAAGAAGAACCGCAACAAGTGCCAGTACT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311565.4
ENST00000337400.6
ENST00000360694.8
ENST00000448077.6
CDS CAA 72 bp AATTCAAACTTAGGCTCAATGATATCACTGAAGGGTTaGCGGAGGCTGCGCAGGAACTCACGGGTGACAAAG +
Preference number: 6 (lower is better)
Translates to: NSNLGSMISLKG*RRLRRNSRVTK
Trigger: CTTTGTCACCCGTGAGTTCCTGCGCAGCCTCCGCAAACCCTTCAGTGATATCATTGAGCCTAAGTTTGAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311565.4
ENST00000337400.6
ENST00000360694.8
ENST00000418635.6
ENST00000448077.6