RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for POU2F3 (Homo sapiens)

Ensembl gene IDs: ENSG00000137709

Ensembl transcript IDs: ENST00000260264.8, ENST00000529039.1, ENST00000532638.1, ENST00000533620.5, ENST00000543440.7, ENST00000606153.1

Found 417 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCCAGGGTGCCCAAATGCCTGGGATGCCAGTCCCGGCCCAGTCTGTaGGAGGAGGAGACCGCTTTGTTGCTGTGGAAAGGGGAGGAGATT +
Preference number: 1 (lower is better)
Translates to: PRVPKCLGCQSRPSL*EEETALLLWKGEEI
Trigger: AATCTCCTCCCCTTTCCACAGCAACAAAGCGGTCTCCTCCTCCCACAGACTGGGCCGGGACTGGCATCCCAGGCATTTGGGCACCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533620.5
3UTR CCA 90 bp AGGGAGGAAGGGAAAGAACAAGCACTCCTGAGCCCTAGGCAGACGTaGACAGACAGAAGGGCACCAGCAGGCGTTGCAACATGCCCAGGG +
Preference number: 1 (lower is better)
Translates to: REEGKEQALLSPRQT*TDRRAPAGVATCPG
Trigger: CCCTGGGCATGTTGCAACGCCTGCTGGTGCCCTTCTGTCTGTCCACGTCTGCCTAGGGCTCAGGAGTGCTTGTTCTTTCCCTTCCTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
3UTR CCA 90 bp CTGGGTAGATGCTTGGGCACTGGGAGATGCTGGGATGCTTCCAGGTaGGGTTCTAAAGAGGATCCTGGCAGCCCAGGGTGCCCAAATGCC +
Preference number: 1 (lower is better)
Translates to: LGRCLGTGRCWDASR*GSKEDPGSPGCPNA
Trigger: GGCATTTGGGCACCCTGGGCTGCCAGGATCCTCTTTAGAACCCCACCTGGAAGCATCCCAGCATCTCCCAGTGCCCAAGCATCTACCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533620.5
3UTR GCA 90 bp AGGCAGACGTGGACAGACAGAAGGGCACCAGCAGGCGTTGCAACATaGCCAGGGCACCCACCAAGGGCAGCTCTTTTACACCTTCTGCAA +
Preference number: 1 (lower is better)
Translates to: RQTWTDRRAPAGVAT*PGHPPRAALLHLLQ
Trigger: TTGCAGAAGGTGTAAAAGAGCTGCCCTTGGTGGGTGCCCTGGGCATGTTGCAACGCCTGCTGGTGCCCTTCTGTCTGTCCACGTCTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
3UTR GCA 90 bp GATGCCAGTCCCGGCCCAGTCTGTGGGAGGAGGAGACCGCTTTGTTaGTGTGGAAAGGGGAGGAGATTTGGCTGCAGACCTAGGTGGTTA +
Preference number: 1 (lower is better)
Translates to: DASPGPVCGRRRPLC*CGKGRRFGCRPRWL
Trigger: TAACCACCTAGGTCTGCAGCCAAATCTCCTCCCCTTTCCACAGCAACAAAGCGGTCTCCTCCTCCCACAGACTGGGCCGGGACTGGCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533620.5
3UTR CCA 90 bp TGGAGGCGGAGTTCACTGCTGCTTTGGAGTTATTTTGAGATGCAGTaGGGCTGCTGGCGTGGAGTCCTGAGCCAGGAGATGAAGGCCTGC +
Preference number: 1 (lower is better)
Translates to: WRRSSLLLWSYFEMQ*GCWRGVLSQEMKAC
Trigger: GCAGGCCTTCATCTCCTGGCTCAGGACTCCACGCCAGCAGCCCCACTGCATCTCAAAATAACTCCAAAGCAGCAGTGAACTCCGCCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533620.5
3UTR TCA 90 bp GCACTTGGTTCAATCACAGTTTGGATCTCCGGAGGCCCTTGCTCTTaGAGAAGACAAGAGTCTGGGTTCATTGATAGTGGAGATTTTCTT +
Preference number: 1 (lower is better)
Translates to: ALGSITVWISGGPCS*RRQESGFIDSGDFL
Trigger: AAGAAAATCTCCACTATCAATGAACCCAGACTCTTGTCTTCTTCAAGAGCAAGGGCCTCCGGAGATCCAAACTGTGATTGAACCAAGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
3UTR TCA 90 bp AGAATAACAGCAAGAAGTCTTTTCTCTGAAAGACTATTGCCACAGTaGAGCTGGCTAAAATATTTGGAACTAGAAGGCAAGGGCATAGGC +
Preference number: 1 (lower is better)
Translates to: RITARSLFSERLLPQ*SWLKYLELEGKGIG
Trigger: GCCTATGCCCTTGCCTTCTAGTTCCAAATATTTTAGCCAGCTTCACTGTGGCAATAGTCTTTCAGAGAAAAGACTTCTTGCTGTTATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
3UTR-3UTR CCA 90 bp AGATGCTGGGATGCTTCCAGGTGGGGTTCTAAAGAGGATCCTGGCAGCCCAGGGTCCCGGCCCAGTCTGTaGGAGGAGGAGACCGCTTTG +
Preference number: 2 (lower is better)
Translates to: RCWDASRWGSKEDPGSPGSRPSL*EEETAL
Trigger: CAAAGCGGTCTCCTCCTCCCACAGACTGGGCCGGGA...CCCTGGGCTGCCAGGATCCTCTTTAGAACCCCACCTGGAAGCATCCCAGCATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533620.5
3UTR-3UTR GCA 90 bp AGTTATTTTGAGATGCAGTGGGGCTGCTGGCGTGGAGTCCTGAGCCAGGAGATGCCCAGGGTGCCCAAATaGCTGGGATGCCAGTCCCGG +
Preference number: 2 (lower is better)
Translates to: SYFEMQWGCWRGVLSQEMPRVPK*LGCQSR
Trigger: CCGGGACTGGCATCCCAGGCATTTGGGCACCCTGGG...CATCTCCTGGCTCAGGACTCCACGCCAGCAGCCCCACTGCATCTCAAAATAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533620.5
3UTR-3UTR GCA 90 bp GATAATGTTCCCAAAGAAGTCAACAAAGATTCCCAGCCCAGGCCAGGCGCGGTGGGCACCAGCAGGCGTTaGAACATGCCCAGGGCACCC +
Preference number: 2 (lower is better)
Translates to: DNVPKEVNKDSQPRPGAVGTSRR*NMPRAP
Trigger: GGGTGCCCTGGGCATGTTGCAACGCCTGCTGGTGCC...CACCGCGCCTGGCCTGGGCTGGGAATCTTTGTTGACTTCTTTGGGAACATTATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
3UTR-3UTR GCA 90 bp AGTTATTTTGAGATGCAGTGGGGCTGCTGGCGTGGAGTCCTGAGCCAGGAGATGGGTAGGAGCTGGGCGTaGTCACTGAGGGGTCTGACG +
Preference number: 2 (lower is better)
Translates to: SYFEMQWGCWRGVLSQEMGRSWA*SLRGLT
Trigger: CGTCAGACCCCTCAGTGAGCACGCCCAGCTCCTACC...CATCTCCTGGCTCAGGACTCCACGCCAGCAGCCCCACTGCATCTCAAAATAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000533620.5
3UTR-3UTR TCA 90 bp AGTCCTGAGCCAGGAGATGAAGGCCTGCTGTTGTTCCCAGGGGAACAGGATGACTGTAGACAGGTGGTTTaGTGGGTGTGGCCACAGGGC +
Preference number: 2 (lower is better)
Translates to: SPEPGDEGLLLFPGEQDDCRQVV*WVWPQG
Trigger: GCCCTGTGGCCACACCCATCAAACCACCTGTCTACA...GTCATCCTGTTCCCCTGGGAACAACAGCAGGCCTTCATCTCCTGGCTCAGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533620.5
3UTR-3UTR GCA 90 bp GGGGTTCTAAAGAGGATCCTGGCAGCCCAGGGTGCCCAAATGCCTGGGATGCCAAGGAGACCGCTTTGTTaGTGTGGAAAGGGGAGGAGA +
Preference number: 2 (lower is better)
Translates to: GVLKRILAAQGAQMPGMPRRPLC*CGKGRR
Trigger: TCTCCTCCCCTTTCCACAGCAACAAAGCGGTCTCCT...TGGCATCCCAGGCATTTGGGCACCCTGGGCTGCCAGGATCCTCTTTAGAACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533620.5
3UTR-3UTR CCA 90 bp AGTCCTGAGCCAGGAGATGAAGGCCTGCTGTTGTTCCCAGGGGAACAGGATGACAGCTGGGTAGATGCTTaGGCACTGGGAGATGCTGGG +
Preference number: 2 (lower is better)
Translates to: SPEPGDEGLLLFPGEQDDSWVDA*ALGDAG
Trigger: CCCAGCATCTCCCAGTGCCCAAGCATCTACCCAGCT...GTCATCCTGTTCCCCTGGGAACAACAGCAGGCCTTCATCTCCTGGCTCAGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533620.5
3UTR-3UTR CCA 90 bp CCCCAGCCAAATGGCTGTCCCCAGAAGCCCACGGATGAGTTGGAGAATAACAGCGGTTCAATCACAGTTTaGATCTCCGGAGGCCCTTGC +
Preference number: 2 (lower is better)
Translates to: PQPNGCPQKPTDELENNSGSITV*ISGGPC
Trigger: GCAAGGGCCTCCGGAGATCCAAACTGTGATTGAACC...GCTGTTATTCTCCAACTCATCCGTGGGCTTCTGGGGACAGCCATTTGGCTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
3UTR-3UTR CCA 90 bp AGATACCAGCCGGGAGTTGTAGACAGGTGGTTTGATGGGTGTGGCCACAGGGCATGGGATGCTTCCAGGTaGGGTTCTAAAGAGGATCCT +
Preference number: 2 (lower is better)
Translates to: RYQPGVVDRWFDGCGHRAWDASR*GSKEDP
Trigger: AGGATCCTCTTTAGAACCCCACCTGGAAGCATCCCA...TGCCCTGTGGCCACACCCATCAAACCACCTGTCTACAACTCCCGGCTGGTATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533620.5
3UTR-3UTR TCA 90 bp CTTCCTTTTCTGCTGCCAGGAGAAAGGAGAGGGGACAGGATAAAGAGAAACACAAAGAACAAGCACTCCTaGGCCCTAGGCAGACGTGGA +
Preference number: 2 (lower is better)
Translates to: LPFLLPGERRGDRIKRNTKNKHS*ALGRRG
Trigger: TCCACGTCTGCCTAGGGCTCAGGAGTGCTTGTTCTT...TGTGTTTCTCTTTATCCTGTCCCCTCTCCTTTCTCCTGGCAGCAGAAAAGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
3UTR-3UTR GCA 90 bp GGAGTTCACTGCTGCTTTGGAGTTATTTTGAGATGCAGTGGGGCTGCTGGCGTGAGCTTAATGCGCCTCTaGTTGAAGGTCTTGGCAAAC +
Preference number: 2 (lower is better)
Translates to: GVHCCFGVILRCSGAAGVSLMRL*LKVLAN
Trigger: GTTTGCCAAGACCTTCAAGCAGAGGCGCATTAAGCT...CACGCCAGCAGCCCCACTGCATCTCAAAATAACTCCAAAGCAGCAGTGAACTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533620.5
3UTR-3UTR CCA 90 bp GAAAGGGCTATATACAGGTACTTTGCCACCATCATTGTTGTGTGTTTGCTCTTGGGCACCCCAGCCAAATaGCTGTCCCCAGAAGCCCAC +
Preference number: 2 (lower is better)
Translates to: ERAIYRYFATIIVVCLLLGTPAK*LSPEAH
Trigger: GTGGGCTTCTGGGGACAGCCATTTGGCTGGGGTGCC...CAAGAGCAAACACACAACAATGATGGTGGCAAAGTACCTGTATATAGCCCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
3UTR CAA 90 bp CTCCTAGGAGGGGCTGTGTATTTCAAGAGCATTAGGAGTCTGCACTaGGTTCAATCACAGTTTGGATCTCCGGAGGCCCTTGCTCTTGAA +
Preference number: 2 (lower is better)
Translates to: LLGGAVYFKSIRSLH*VQSQFGSPEALALE
Trigger: TTCAAGAGCAAGGGCCTCCGGAGATCCAAACTGTGATTGAACCAAGTGCAGACTCCTAATGCTCTTGAAATACACAGCCCCTCCTAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
3UTR-3UTR TCA 90 bp CCCCAGCCAAATGGCTGTCCCCAGAAGCCCACGGATGAGTTGGAGAATAACAGCTTTCTTCCACTCTTCTaGAGGCAATCTGTCTGTATA +
Preference number: 2 (lower is better)
Translates to: PQPNGCPQKPTDELENNSFLPLF*RQSVCI
Trigger: TATACAGACAGATTGCCTTCAGAAGAGTGGAAGAAA...GCTGTTATTCTCCAACTCATCCGTGGGCTTCTGGGGACAGCCATTTGGCTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
3UTR-3UTR TCA 90 bp CCCCAGCCAAATGGCTGTCCCCAGAAGCCCACGGATGAGTTGGAGAATAACAGCAGACTATTGCCACAGTaGAGCTGGCTAAAATATTTG +
Preference number: 2 (lower is better)
Translates to: PQPNGCPQKPTDELENNSRLLPQ*SWLKYL
Trigger: CAAATATTTTAGCCAGCTTCACTGTGGCAATAGTCT...GCTGTTATTCTCCAACTCATCCGTGGGCTTCTGGGGACAGCCATTTGGCTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
3UTR-3UTR CCA 90 bp CTTCCTTTTCTGCTGCCAGGAGAAAGGAGAGGGGACAGGATAAAGAGAAACACAGGTTCAATCACAGTTTaGATCTCCGGAGGCCCTTGC +
Preference number: 2 (lower is better)
Translates to: LPFLLPGERRGDRIKRNTGSITV*ISGGPC
Trigger: GCAAGGGCCTCCGGAGATCCAAACTGTGATTGAACC...TGTGTTTCTCTTTATCCTGTCCCCTCTCCTTTCTCCTGGCAGCAGAAAAGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
3UTR-3UTR TCA 90 bp TTGGTCTCGATGCTGGTCCGTTTCTTTCTCTTCCTACCAAATACTTCACTGAGGAGATGGTGGTCTGGCTaGAGTCGTTGCCATACAGCT +
Preference number: 2 (lower is better)
Translates to: LVSMLVRFFLFLPNTSLRRWWSG*SRCHTA
Trigger: AGCTGTATGGCAACGACTTCAGCCAGACCACCATCT...CCTCAGTGAAGTATTTGGTAGGAAGAGAAAGAAACGGACCAGCATCGAGACCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533620.5
3UTR-3UTR CCA 90 bp GAAAGGGCTATATACAGGTACTTTGCCACCATCATTGTTGTGTGTTTGCTCTTGAGCCCTAGGCAGACGTaGACAGACAGAAGGGCACCA +
Preference number: 2 (lower is better)
Translates to: ERAIYRYFATIIVVCLLLSPRQT*TDRRAP
Trigger: TGGTGCCCTTCTGTCTGTCCACGTCTGCCTAGGGCT...CAAGAGCAAACACACAACAATGATGGTGGCAAAGTACCTGTATATAGCCCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
3UTR-3UTR CCA 90 bp GATGCTGGTCCGTTTCTTTCTCTTCCTACCAAATACTTCACTGAGGCTGGGGTAACCGCTTTGTTGCTGTaGAAAGGGGAGGAGATTTGG +
Preference number: 2 (lower is better)
Translates to: DAGPFLSLPTKYFTEAGVTALLL*KGEEIW
Trigger: CCAAATCTCCTCCCCTTTCCACAGCAACAAAGCGGT...TACCCCAGCCTCAGTGAAGTATTTGGTAGGAAGAGAAAGAAACGGACCAGCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533620.5
3UTR-3UTR CCA 90 bp GTTAAAACTGGAGGCGGAGTTCACTGCTGCTTTGGAGTTATTTTGAGATGCAGTGGAGTTGTAGACAGGTaGTTTGATGGGTGTGGCCAC +
Preference number: 2 (lower is better)
Translates to: VKTGGGVHCCFGVILRCSGVVDR*FDGCGH
Trigger: GTGGCCACACCCATCAAACCACCTGTCTACAACTCC...ACTGCATCTCAAAATAACTCCAAAGCAGCAGTGAACTCCGCCTCCAGTTTTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533620.5
3UTR CAA 90 bp TCTCCGGAGGCCCTTGCTCTTGAAGAAGACAAGAGTCTGGGTTCATaGATAGTGGAGATTTTCTTCCACTCTTCTGAAGGCAATCTGTCT +
Preference number: 2 (lower is better)
Translates to: SPEALALEEDKSLGS*IVEIFFHSSEGNLS
Trigger: AGACAGATTGCCTTCAGAAGAGTGGAAGAAAATCTCCACTATCAATGAACCCAGACTCTTGTCTTCTTCAAGAGCAAGGGCCTCCGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
3UTR CAA 90 bp TGTATTTCAAGAGCATTAGGAGTCTGCACTTGGTTCAATCACAGTTaGGATCTCCGGAGGCCCTTGCTCTTGAAGAAGACAAGAGTCTGG +
Preference number: 2 (lower is better)
Translates to: CISRALGVCTWFNHS*DLRRPLLLKKTRVW
Trigger: CCAGACTCTTGTCTTCTTCAAGAGCAAGGGCCTCCGGAGATCCAAACTGTGATTGAACCAAGTGCAGACTCCTAATGCTCTTGAAATACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
3UTR-3UTR GCA 90 bp CTTCCTTTTCTGCTGCCAGGAGAAAGGAGAGGGGACAGGATAAAGAGAAACACAAGAGCATTAGGAGTCTaGACTTGGTTCAATCACAGT +
Preference number: 2 (lower is better)
Translates to: LPFLLPGERRGDRIKRNTRALGV*TWFNHS
Trigger: ACTGTGATTGAACCAAGTGCAGACTCCTAATGCTCT...TGTGTTTCTCTTTATCCTGTCCCCTCTCCTTTCTCCTGGCAGCAGAAAAGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
3UTR-3UTR CCA 90 bp TCAGAAAACTTAGCTGTACAGAGAAAACATCAAGGCTTTGGTGGAGATATCAGATCCCCTTCTGGTGTTTaGCACCCCAGCCAAATGGCT +
Preference number: 2 (lower is better)
Translates to: SENLAVQRKHQGFGGDIRSPSGV*HPSQMA
Trigger: AGCCATTTGGCTGGGGTGCCAAACACCAGAAGGGGA...TCTGATATCTCCACCAAAGCCTTGATGTTTTCTCTGTACAGCTAAGTTTTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
3UTR-3UTR GCA 90 bp GTTAAAACTGGAGGCGGAGTTCACTGCTGCTTTGGAGTTATTTTGAGATGCAGTTTCTCCATGGACAACTaGTCTGCAATCATGGAGATC +
Preference number: 2 (lower is better)
Translates to: VKTGGGVHCCFGVILRCSFSMDN*SAIMEI
Trigger: GATCTCCATGATTGCAGAGCAGTTGTCCATGGAGAA...ACTGCATCTCAAAATAACTCCAAAGCAGCAGTGAACTCCGCCTCCAGTTTTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533620.5
3UTR-3UTR CCA 90 bp GAAAGGGCTATATACAGGTACTTTGCCACCATCATTGTTGTGTGTTTGCTCTTGTTAGGAGTCTGCACTTaGTTCAATCACAGTTTGGAT +
Preference number: 2 (lower is better)
Translates to: ERAIYRYFATIIVVCLLLLGVCT*FNHSLD
Trigger: ATCCAAACTGTGATTGAACCAAGTGCAGACTCCTAA...CAAGAGCAAACACACAACAATGATGGTGGCAAAGTACCTGTATATAGCCCTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
3UTR-3UTR CCA 90 bp TCAGAAAACTTAGCTGTACAGAGAAAACATCAAGGCTTTGGTGGAGATATCAGATCAGTTCAGGGGTTGTaGCCAAGTTCAGAGTCAAAA +
Preference number: 2 (lower is better)
Translates to: SENLAVQRKHQGFGGDIRSVQGL*PSSESK
Trigger: TTTTGACTCTGAACTTGGCCACAACCCCTGAACTGA...TCTGATATCTCCACCAAAGCCTTGATGTTTTCTCTGTACAGCTAAGTTTTCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
3UTR-3UTR TCA 90 bp GTGTATTTCAAGAGCATTAGGAGTCTGCACTTGGTTCAATCACAGTTTGGATCTTTTCTTCCACTCTTCTaGAGGCAATCTGTCTGTATA +
Preference number: 2 (lower is better)
Translates to: VYFKSIRSLHLVQSQFGSFLPLF*RQSVCI
Trigger: TATACAGACAGATTGCCTTCAGAAGAGTGGAAGAAA...AGATCCAAACTGTGATTGAACCAAGTGCAGACTCCTAATGCTCTTGAAATACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
3UTR-3UTR TCA 90 bp TCAGAAAACTTAGCTGTACAGAGAAAACATCAAGGCTTTGGTGGAGATATCAGAAGACTATTGCCACAGTaGAGCTGGCTAAAATATTTG +
Preference number: 2 (lower is better)
Translates to: SENLAVQRKHQGFGGDIRRLLPQ*SWLKYL
Trigger: CAAATATTTTAGCCAGCTTCACTGTGGCAATAGTCT...TCTGATATCTCCACCAAAGCCTTGATGTTTTCTCTGTACAGCTAAGTTTTCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
3UTR CCA 72 bp CCCAAATGCCTGGGATGCCAGTCCCGGCCCAGTCTGTaGGAGGAGGAGACCGCTTTGTTGCTGTGGAAAGGG +
Preference number: 3 (lower is better)
Translates to: PKCLGCQSRPSL*EEETALLLWKG
Trigger: CCCTTTCCACAGCAACAAAGCGGTCTCCTCCTCCCACAGACTGGGCCGGGACTGGCATCCCAGGCATTTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533620.5
3UTR GCA 72 bp CCCGGCCCAGTCTGTGGGAGGAGGAGACCGCTTTGTTaGTGTGGAAAGGGGAGGAGATTTGGCTGCAGACCT +
Preference number: 3 (lower is better)
Translates to: PGPVCGRRRPLC*CGKGRRFGCRP
Trigger: AGGTCTGCAGCCAAATCTCCTCCCCTTTCCACAGCAACAAAGCGGTCTCCTCCTCCCACAGACTGGGCCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533620.5
3UTR CCA 72 bp TGCTTGGGCACTGGGAGATGCTGGGATGCTTCCAGGTaGGGTTCTAAAGAGGATCCTGGCAGCCCAGGGTGC +
Preference number: 3 (lower is better)
Translates to: CLGTGRCWDASR*GSKEDPGSPGC
Trigger: GCACCCTGGGCTGCCAGGATCCTCTTTAGAACCCCACCTGGAAGCATCCCAGCATCTCCCAGTGCCCAAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533620.5
3UTR-3UTR CAA 90 bp GATAATGTTCCCAAAGAAGTCAACAAAGATTCCCAGCCCAGGCCAGGCGCGGTGGGGCACCAGCAGGCGTaGCAACATGCCCAGGGCACC +
Preference number: 3 (lower is better)
Translates to: DNVPKEVNKDSQPRPGAVGHQQA*QHAQGT
Trigger: GGTGCCCTGGGCATGTTGCAACGCCTGCTGGTGCCC...CACCGCGCCTGGCCTGGGCTGGGAATCTTTGTTGACTTCTTTGGGAACATTATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
3UTR-3UTR CAA 90 bp GGGGTTCTAAAGAGGATCCTGGCAGCCCAGGGTGCCCAAATGCCTGGGATGCCAGAGGAGGAGACCGCTTaGTTGCTGTGGAAAGGGGAG +
Preference number: 3 (lower is better)
Translates to: GVLKRILAAQGAQMPGMPEEETA*LLWKGE
Trigger: CTCCCCTTTCCACAGCAACAAAGCGGTCTCCTCCTC...TGGCATCCCAGGCATTTGGGCACCCTGGGCTGCCAGGATCCTCTTTAGAACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533620.5
3UTR GCA 72 bp TGCTGGCGTGGAGTCCTGAGCCAGGAGATGAAGGCCTaGTGTTGTTCCCAGGGGAACAGGATGACGTTACTG +
Preference number: 3 (lower is better)
Translates to: CWRGVLSQEMKA*CCSQGNRMTLL
Trigger: CAGTAACGTCATCCTGTTCCCCTGGGAACAACAGCAGGCCTTCATCTCCTGGCTCAGGACTCCACGCCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533620.5
3UTR CCA 72 bp GGGAAAGAACAAGCACTCCTGAGCCCTAGGCAGACGTaGACAGACAGAAGGGCACCAGCAGGCGTTGCAACA +
Preference number: 3 (lower is better)
Translates to: GKEQALLSPRQT*TDRRAPAGVAT
Trigger: TGTTGCAACGCCTGCTGGTGCCCTTCTGTCTGTCCACGTCTGCCTAGGGCTCAGGAGTGCTTGTTCTTTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
3UTR-3UTR CAA 90 bp CCCCAGCCAAATGGCTGTCCCCAGAAGCCCACGGATGAGTTGGAGAATAACAGCCGGAGGCCCTTGCTCTaGAAGAAGACAAGAGTCTGG +
Preference number: 3 (lower is better)
Translates to: PQPNGCPQKPTDELENNSRRPLL*KKTRVW
Trigger: CCAGACTCTTGTCTTCTTCAAGAGCAAGGGCCTCCG...GCTGTTATTCTCCAACTCATCCGTGGGCTTCTGGGGACAGCCATTTGGCTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
3UTR TCA 72 bp CTGGAGGCGGAGTTCACTGCTGCTTTGGAGTTATTTTaGGATGCAGTGGGGCTGCTGGCGTGGAGTCCTGAG +
Preference number: 3 (lower is better)
Translates to: LEAEFTAALELF*DAVGLLAWSPE
Trigger: CTCAGGACTCCACGCCAGCAGCCCCACTGCATCTCAAAATAACTCCAAAGCAGCAGTGAACTCCGCCTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533620.5
3UTR-3UTR CAA 90 bp GGTGGTTTGATGGGTGTGGCCACAGGGCAGTTGATTCGCTTCTCCTTTTGGCGTGAAAGGGGAGGAGATTaGGCTGCAGACCTAGGTGGT +
Preference number: 3 (lower is better)
Translates to: GGLMGVATGQLIRFSFWRERGGD*AADLGG
Trigger: ACCACCTAGGTCTGCAGCCAAATCTCCTCCCCTTTC...ACGCCAAAAGGAGAAGCGAATCAACTGCCCTGTGGCCACACCCATCAAACCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533620.5
3UTR-3UTR CAA 90 bp GGAGTTCACTGCTGCTTTGGAGTTATTTTGAGATGCAGTGGGGCTGCTGGCGTGGAGGAGACCGCTTTGTaGCTGTGGAAAGGGGAGGAG +
Preference number: 3 (lower is better)
Translates to: GVHCCFGVILRCSGAAGVEETAL*LWKGEE
Trigger: CTCCTCCCCTTTCCACAGCAACAAAGCGGTCTCCTC...CACGCCAGCAGCCCCACTGCATCTCAAAATAACTCCAAAGCAGCAGTGAACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000533620.5
3UTR-3UTR CAA 90 bp GGAGTTCACTGCTGCTTTGGAGTTATTTTGAGATGCAGTGGGGCTGCTGGCGTGGTGGCCACAGGGCAGTaGATTCGCTTCTCCTTTTGG +
Preference number: 3 (lower is better)
Translates to: GVHCCFGVILRCSGAAGVVATGQ*IRFSFW
Trigger: CCAAAAGGAGAAGCGAATCAACTGCCCTGTGGCCAC...CACGCCAGCAGCCCCACTGCATCTCAAAATAACTCCAAAGCAGCAGTGAACTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000533620.5
3UTR-3UTR CAA 90 bp CTTCCTTTTCTGCTGCCAGGAGAAAGGAGAGGGGACAGGATAAAGAGAAACACACTCCCCTTCTGGTGTTaGGCACCCCAGCCAAATGGC +
Preference number: 3 (lower is better)
Translates to: LPFLLPGERRGDRIKRNTLPFWC*APQPNG
Trigger: GCCATTTGGCTGGGGTGCCAAACACCAGAAGGGGAG...TGTGTTTCTCTTTATCCTGTCCCCTCTCCTTTCTCCTGGCAGCAGAAAAGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
3UTR-3UTR CAA 90 bp AGTTATTTTGAGATGCAGTGGGGCTGCTGGCGTGGAGTCCTGAGCCAGGAGATGCCTCCGAGCTGGGTTTaGGGTTATCTTGAAACCTCT +
Preference number: 3 (lower is better)
Translates to: SYFEMQWGCWRGVLSQEMPPSWV*GYLETS
Trigger: AGAGGTTTCAAGATAACCCAAAACCCAGCTCGGAGG...CATCTCCTGGCTCAGGACTCCACGCCAGCAGCCCCACTGCATCTCAAAATAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533620.5
3UTR-3UTR CAA 90 bp CCCCAGCCAAATGGCTGTCCCCAGAAGCCCACGGATGAGTTGGAGAATAACAGCAGCTGGCTAAAATATTaGGAACTAGAAGGCAAGGGC +
Preference number: 3 (lower is better)
Translates to: PQPNGCPQKPTDELENNSSWLKY*ELEGKG
Trigger: GCCCTTGCCTTCTAGTTCCAAATATTTTAGCCAGCT...GCTGTTATTCTCCAACTCATCCGTGGGCTTCTGGGGACAGCCATTTGGCTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
3UTR-3UTR CAA 90 bp CTTCCTTTTCTGCTGCCAGGAGAAAGGAGAGGGGACAGGATAAAGAGAAACACAGATCTCCGGAGGCCCTaGCTCTTGAAGAAGACAAGA +
Preference number: 3 (lower is better)
Translates to: LPFLLPGERRGDRIKRNTDLRRP*LLKKTR
Trigger: TCTTGTCTTCTTCAAGAGCAAGGGCCTCCGGAGATC...TGTGTTTCTCTTTATCCTGTCCCCTCTCCTTTCTCCTGGCAGCAGAAAAGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
3UTR CCA 72 bp GGGCTGTGTATTTCAAGAGCATTAGGAGTCTGCACTTaGTTCAATCACAGTTTGGATCTCCGGAGGCCCTTG +
Preference number: 3 (lower is better)
Translates to: GLCISRALGVCT*FNHSLDLRRPL
Trigger: CAAGGGCCTCCGGAGATCCAAACTGTGATTGAACCAAGTGCAGACTCCTAATGCTCTTGAAATACACAGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
3UTR-3UTR CAA 90 bp GAAAGGGCTATATACAGGTACTTTGCCACCATCATTGTTGTGTGTTTGCTCTTGCGGAGGCCCTTGCTCTaGAAGAAGACAAGAGTCTGG +
Preference number: 3 (lower is better)
Translates to: ERAIYRYFATIIVVCLLLRRPLL*KKTRVW
Trigger: CCAGACTCTTGTCTTCTTCAAGAGCAAGGGCCTCCG...CAAGAGCAAACACACAACAATGATGGTGGCAAAGTACCTGTATATAGCCCTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
3UTR-3UTR CAA 90 bp ATTGCCACAGTGAAGCTGGCTAAAATATTTGGAACTAGAAGGCAAGGGCATAGGTGGTTCAATCACAGTTaGGATCTCCGGAGGCCCTTG +
Preference number: 3 (lower is better)
Translates to: IATVKLAKIFGTRRQGHRWFNHS*DLRRPL
Trigger: CAAGGGCCTCCGGAGATCCAAACTGTGATTGAACCA...CCTATGCCCTTGCCTTCTAGTTCCAAATATTTTAGCCAGCTTCACTGTGGCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
3UTR-3UTR CAA 90 bp GATAATGTTCCCAAAGAAGTCAACAAAGATTCCCAGCCCAGGCCAGGCGCGGTGGAAAACATCAAGGCTTaGGTGGAGATATCAGATTCA +
Preference number: 3 (lower is better)
Translates to: DNVPKEVNKDSQPRPGAVENIKA*VEISDS
Trigger: TGAATCTGATATCTCCACCAAAGCCTTGATGTTTTC...CACCGCGCCTGGCCTGGGCTGGGAATCTTTGTTGACTTCTTTGGGAACATTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
3UTR-3UTR CAA 90 bp GAAAGGGCTATATACAGGTACTTTGCCACCATCATTGTTGTGTGTTTGCTCTTGGGATCAGTTCAGGGGTaGTGGCCAAGTTCAGAGTCA +
Preference number: 3 (lower is better)
Translates to: ERAIYRYFATIIVVCLLLGSVQG*WPSSES
Trigger: TGACTCTGAACTTGGCCACAACCCCTGAACTGATCC...CAAGAGCAAACACACAACAATGATGGTGGCAAAGTACCTGTATATAGCCCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
3UTR TCA 72 bp TCAATCACAGTTTGGATCTCCGGAGGCCCTTGCTCTTaGAGAAGACAAGAGTCTGGGTTCATTGATAGTGGA +
Preference number: 3 (lower is better)
Translates to: SITVWISGGPCS*RRQESGFIDSG
Trigger: TCCACTATCAATGAACCCAGACTCTTGTCTTCTTCAAGAGCAAGGGCCTCCGGAGATCCAAACTGTGATTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
3UTR-3UTR CAA 90 bp ATTGCCACAGTGAAGCTGGCTAAAATATTTGGAACTAGAAGGCAAGGGCATAGGAAGAGTCTGGGTTCATaGATAGTGGAGATTTTCTTC +
Preference number: 3 (lower is better)
Translates to: IATVKLAKIFGTRRQGHRKSLGS*IVEIFF
Trigger: GAAGAAAATCTCCACTATCAATGAACCCAGACTCTT...CCTATGCCCTTGCCTTCTAGTTCCAAATATTTTAGCCAGCTTCACTGTGGCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
3UTR-3UTR CAA 90 bp GAAAGGGCTATATACAGGTACTTTGCCACCATCATTGTTGTGTGTTTGCTCTTGATTAGGAGTCTGCACTaGGTTCAATCACAGTTTGGA +
Preference number: 3 (lower is better)
Translates to: ERAIYRYFATIIVVCLLLIRSLH*VQSQFG
Trigger: TCCAAACTGTGATTGAACCAAGTGCAGACTCCTAAT...CAAGAGCAAACACACAACAATGATGGTGGCAAAGTACCTGTATATAGCCCTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
3UTR TCA 72 bp GCAAGAAGTCTTTTCTCTGAAAGACTATTGCCACAGTaGAGCTGGCTAAAATATTTGGAACTAGAAGGCAAG +
Preference number: 3 (lower is better)
Translates to: ARSLFSERLLPQ*SWLKYLELEGK
Trigger: CTTGCCTTCTAGTTCCAAATATTTTAGCCAGCTTCACTGTGGCAATAGTCTTTCAGAGAAAAGACTTCTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR GCA 90 bp AGGGTGCCCAAATGCCTGGGATGCCAGTCCCGGCCCAGTCTGTGGGAGGAGGAGGGTAGGAGCTGGGCGTaGTCACTGAGGGGTCTGACG +
Preference number: 4 (lower is better)
Translates to: RVPKCLGCQSRPSLWEEEGRSWA*SLRGLT
Trigger: CGTCAGACCCCTCAGTGAGCACGCCCAGCTCCTACC...CTCCTCCTCCCACAGACTGGGCCGGGACTGGCATCCCAGGCATTTGGGCACCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533620.5
CDS-3UTR CCA 90 bp GCCTGGGATGCCAGTCCCGGCCCAGTCTGTGGGAGGAGGAGACCGCTTTGTTGCTCCCGGCCCAGTCTGTaGGAGGAGGAGACCGCTTTG +
Preference number: 4 (lower is better)
Translates to: AWDASPGPVCGRRRPLCCSRPSL*EEETAL
Trigger: CAAAGCGGTCTCCTCCTCCCACAGACTGGGCCGGGA...GCAACAAAGCGGTCTCCTCCTCCCACAGACTGGGCCGGGACTGGCATCCCAGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533620.5
CDS-3UTR TCA 90 bp GGTGGGGTTCTAAAGAGGATCCTGGCAGCCCAGGGTGCCCAAATGCCTGGGATGGGGGCCCAGAGACCCTaGGGGAGATACCAGCCGGGA +
Preference number: 4 (lower is better)
Translates to: GGVLKRILAAQGAQMPGMGAQRP*GRYQPG
Trigger: TCCCGGCTGGTATCTCCCTCAGGGTCTCTGGGCCCC...CATCCCAGGCATTTGGGCACCCTGGGCTGCCAGGATCCTCTTTAGAACCCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000533620.5
CDS-3UTR GCA 90 bp AAAGAGGATCCTGGCAGCCCAGGGTGCCCAAATGCCTGGGATGCCAGTCCCGGCCCCAAATGCCTGGGATaGCAGTCCCGGCCCAGTCTG +
Preference number: 4 (lower is better)
Translates to: KEDPGSPGCPNAWDASPGPKCLG*QSRPSL
Trigger: CAGACTGGGCCGGGACTGGCATCCCAGGCATTTGGG...GCCGGGACTGGCATCCCAGGCATTTGGGCACCCTGGGCTGCCAGGATCCTCTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533620.5
CDS-3UTR TCA 90 bp GCCTGGGATGCCAGTCCCGGCCCAGTCTGTGGGAGGAGGAGACCGCTTTGTTGCTGCCCAGGCTGGGTCTaGGATAGCAGGAACTGGGAT +
Preference number: 4 (lower is better)
Translates to: AWDASPGPVCGRRRPLCCCPGWV*DSRNWD
Trigger: ATCCCAGTTCCTGCTATCTCAGACCCAGCCTGGGCA...GCAACAAAGCGGTCTCCTCCTCCCACAGACTGGGCCGGGACTGGCATCCCAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533620.5
CDS-3UTR TCA 90 bp AGATGCTGGGATGCTTCCAGGTGGGGTTCTAAAGAGGATCCTGGCAGCCCAGGGCTGGCTCCACCTGGCTaGGAGTGCTGCGAGCATCCG +
Preference number: 4 (lower is better)
Translates to: RCWDASRWGSKEDPGSPGLAPPG*ECCEHP
Trigger: CGGATGCTCGCAGCACTCTCAGCCAGGTGGAGCCAG...CCCTGGGCTGCCAGGATCCTCTTTAGAACCCCACCTGGAAGCATCCCAGCATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533620.5
CDS-3UTR CCA 90 bp AGATGCTGGGATGCTTCCAGGTGGGGTTCTAAAGAGGATCCTGGCAGCCCAGGGGGGTGCCCAAATGCCTaGGATGCCAGTCCCGGCCCA +
Preference number: 4 (lower is better)
Translates to: RCWDASRWGSKEDPGSPGGCPNA*DASPGP
Trigger: TGGGCCGGGACTGGCATCCCAGGCATTTGGGCACCC...CCCTGGGCTGCCAGGATCCTCTTTAGAACCCCACCTGGAAGCATCCCAGCATCT
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000533620.5
CDS-3UTR CCA 90 bp AGATGCTGGGATGCTTCCAGGTGGGGTTCTAAAGAGGATCCTGGCAGCCCAGGGGTGGGGCTGCTGGCGTaGAGTCCTGAGCCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: RCWDASRWGSKEDPGSPGVGLLA*SPEPGD
Trigger: ATCTCCTGGCTCAGGACTCCACGCCAGCAGCCCCAC...CCCTGGGCTGCCAGGATCCTCTTTAGAACCCCACCTGGAAGCATCCCAGCATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000533620.5
CDS-3UTR GCA 90 bp GGGGTTCTAAAGAGGATCCTGGCAGCCCAGGGTGCCCAAATGCCTGGGATGCCACGATGGGAGAGGGTCTaGTGCAGGGAGTCACTGAGA +
Preference number: 4 (lower is better)
Translates to: GVLKRILAAQGAQMPGMPRWERV*CRESLR
Trigger: TCTCAGTGACTCCCTGCAGCAGACCCTCTCCCATCG...TGGCATCCCAGGCATTTGGGCACCCTGGGCTGCCAGGATCCTCTTTAGAACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533620.5
CDS-3UTR CCA 90 bp TCCAGGTGGGGTTCTAAAGAGGATCCTGGCAGCCCAGGGTGCCCAAATGCCTGGTGCTGCGAGCATCCGTaGAATCGGCTACATCCCCAC +
Preference number: 4 (lower is better)
Translates to: SRWGSKEDPGSPGCPNAWCCEHP*NRLHPH
Trigger: GTGGGGATGTAGCCGATTCCACGGATGCTCGCAGCA...CCAGGCATTTGGGCACCCTGGGCTGCCAGGATCCTCTTTAGAACCCCACCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533620.5
CDS-3UTR CCA 90 bp GCCTGGGATGCCAGTCCCGGCCCAGTCTGTGGGAGGAGGAGACCGCTTTGTTGCCTCAGTGGAGGTAGGTaGAATGATTCCATCGGTACC +
Preference number: 4 (lower is better)
Translates to: AWDASPGPVCGRRRPLCCLSGGR*NDSIGT
Trigger: GGTACCGATGGAATCATTCCACCTACCTCCACTGAG...GCAACAAAGCGGTCTCCTCCTCCCACAGACTGGGCCGGGACTGGCATCCCAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533620.5
CDS-3UTR CCA 90 bp CCCCAGCCAAATGGCTGTCCCCAGAAGCCCACGGATGAGTTGGAGAATAACAGCGGCACCCCAGCCAAATaGCTGTCCCCAGAAGCCCAC +
Preference number: 4 (lower is better)
Translates to: PQPNGCPQKPTDELENNSGTPAK*LSPEAH
Trigger: GTGGGCTTCTGGGGACAGCCATTTGGCTGGGGTGCC...GCTGTTATTCTCCAACTCATCCGTGGGCTTCTGGGGACAGCCATTTGGCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR TCA 90 bp AAAGAGGATCCTGGCAGCCCAGGGTGCCCAAATGCCTGGGATGCCAGTCCCGGCGCTTTGGAGTTATTTTaGGATGCAGTGGGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: KEDPGSPGCPNAWDASPGALELF*DAVGLL
Trigger: CAGCAGCCCCACTGCATCTCAAAATAACTCCAAAGC...GCCGGGACTGGCATCCCAGGCATTTGGGCACCCTGGGCTGCCAGGATCCTCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533620.5
CDS-3UTR GCA 90 bp CCCCAGCCAAATGGCTGTCCCCAGAAGCCCACGGATGAGTTGGAGAATAACAGCGGGAGGAGATTTGGCTaGAGACCTTGCTGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: PQPNGCPQKPTDELENNSGRRFG*RPCCPG
Trigger: GCCTGGGCAGCAAGGTCTGCAGCCAAATCTCCTCCC...GCTGTTATTCTCCAACTCATCCGTGGGCTTCTGGGGACAGCCATTTGGCTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR GCA 90 bp AGGGTGCCCAAATGCCTGGGATGCCAGTCCCGGCCCAGTCTGTGGGAGGAGGAGAGCTTAATGCGCCTCTaGTTGAAGGTCTTGGCAAAC +
Preference number: 4 (lower is better)
Translates to: RVPKCLGCQSRPSLWEEESLMRL*LKVLAN
Trigger: GTTTGCCAAGACCTTCAAGCAGAGGCGCATTAAGCT...CTCCTCCTCCCACAGACTGGGCCGGGACTGGCATCCCAGGCATTTGGGCACCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533620.5
CDS-3UTR GCA 90 bp GCCTGGGATGCCAGTCCCGGCCCAGTCTGTGGGAGGAGGAGACCGCTTTGTTGCGGAGGCGGAGTTCACTaGTGCTTTGGAGTTATTTTG +
Preference number: 4 (lower is better)
Translates to: AWDASPGPVCGRRRPLCCGGGVH*CFGVIL
Trigger: CAAAATAACTCCAAAGCAGCAGTGAACTCCGCCTCC...GCAACAAAGCGGTCTCCTCCTCCCACAGACTGGGCCGGGACTGGCATCCCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533620.5
CDS-3UTR CCA 90 bp GGCACTGGGAGATGCTGGGATGCTTCCAGGTGGGGTTCTAAAGAGGATCCTGGCTTGACTCAGGTGGCATaGCCGATGGGAGAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: GTGRCWDASRWGSKEDPGLTQVA*PMGEGL
Trigger: CAGACCCTCTCCCATCGGCCATGCCACCTGAGTCAA...GCCAGGATCCTCTTTAGAACCCCACCTGGAAGCATCCCAGCATCTCCCAGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533620.5
CDS-3UTR CCA 90 bp GATAATGTTCCCAAAGAAGTCAACAAAGATTCCCAGCCCAGGCCAGGCGCGGTGGGGTGCCCAAATGCCTaGGATGCCAGTCCCGGCCCA +
Preference number: 4 (lower is better)
Translates to: DNVPKEVNKDSQPRPGAVGCPNA*DASPGP
Trigger: TGGGCCGGGACTGGCATCCCAGGCATTTGGGCACCC...CACCGCGCCTGGCCTGGGCTGGGAATCTTTGTTGACTTCTTTGGGAACATTATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CCA 90 bp GGAGTTCACTGCTGCTTTGGAGTTATTTTGAGATGCAGTGGGGCTGCTGGCGTGGGCTGGGGTAGGAGCTaGGCGTGCTCACTGAGGGGT +
Preference number: 4 (lower is better)
Translates to: GVHCCFGVILRCSGAAGVGWGRS*ACSLRG
Trigger: ACCCCTCAGTGAGCACGCCCAGCTCCTACCCCAGCC...CACGCCAGCAGCCCCACTGCATCTCAAAATAACTCCAAAGCAGCAGTGAACTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000533620.5
CDS-3UTR GCA 90 bp CCCCAGCCAAATGGCTGTCCCCAGAAGCCCACGGATGAGTTGGAGAATAACAGCCGATGGGAGAGGGTCTaGTGCAGGGAGTCACTGAGA +
Preference number: 4 (lower is better)
Translates to: PQPNGCPQKPTDELENNSRWERV*CRESLR
Trigger: TCTCAGTGACTCCCTGCAGCAGACCCTCTCCCATCG...GCTGTTATTCTCCAACTCATCCGTGGGCTTCTGGGGACAGCCATTTGGCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR GCA 90 bp GATAATGTTCCCAAAGAAGTCAACAAAGATTCCCAGCCCAGGCCAGGCGCGGTGGGTAGGAGCTGGGCGTaGTCACTGAGGGGTCTGACG +
Preference number: 4 (lower is better)
Translates to: DNVPKEVNKDSQPRPGAVGRSWA*SLRGLT
Trigger: CGTCAGACCCCTCAGTGAGCACGCCCAGCTCCTACC...CACCGCGCCTGGCCTGGGCTGGGAATCTTTGTTGACTTCTTTGGGAACATTATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR GCA 90 bp GGAGTTCACTGCTGCTTTGGAGTTATTTTGAGATGCAGTGGGGCTGCTGGCGTGGAGATGCAGTGGGGCTaGTGGCGTGGAGTCCTGAGC +
Preference number: 4 (lower is better)
Translates to: GVHCCFGVILRCSGAAGVEMQWG*WRGVLS
Trigger: GCTCAGGACTCCACGCCAGCAGCCCCACTGCATCTC...CACGCCAGCAGCCCCACTGCATCTCAAAATAACTCCAAAGCAGCAGTGAACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000533620.5
CDS-3UTR GCA 90 bp GATAATGTTCCCAAAGAAGTCAACAAAGATTCCCAGCCCAGGCCAGGCGCGGTGGCAGGCGTTGCAACATaGCCAGGGCACCCACCAAGG +
Preference number: 4 (lower is better)
Translates to: DNVPKEVNKDSQPRPGAVAGVAT*PGHPPR
Trigger: CCTTGGTGGGTGCCCTGGGCATGTTGCAACGCCTGC...CACCGCGCCTGGCCTGGGCTGGGAATCTTTGTTGACTTCTTTGGGAACATTATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CCA 90 bp AAAGAGGATCCTGGCAGCCCAGGGTGCCCAAATGCCTGGGATGCCAGTCCCGGCTGTCCTGACATGGGCTaGCATTTAGCCCAGACATTT +
Preference number: 4 (lower is better)
Translates to: KEDPGSPGCPNAWDASPGCPDMG*HLAQTF
Trigger: AAATGTCTGGGCTAAATGCCAGCCCATGTCAGGACA...GCCGGGACTGGCATCCCAGGCATTTGGGCACCCTGGGCTGCCAGGATCCTCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533620.5
CDS-3UTR CCA 90 bp CCAGGTGGGGTTCTAAAGAGGATCCTGGCAGCCCAGGGTGCCCAAATGCCTGGGTGGGATGCTTCCAGGTaGGGTTCTAAAGAGGATCCT +
Preference number: 4 (lower is better)
Translates to: PGGVLKRILAAQGAQMPGWDASR*GSKEDP
Trigger: AGGATCCTCTTTAGAACCCCACCTGGAAGCATCCCA...CCCAGGCATTTGGGCACCCTGGGCTGCCAGGATCCTCTTTAGAACCCCACCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533620.5
CDS-3UTR CCA 90 bp AGATACCAGCCGGGAGTTGTAGACAGGTGGTTTGATGGGTGTGGCCACAGGGCAAGCTGGGTAGATGCTTaGGCACTGGGAGATGCTGGG +
Preference number: 4 (lower is better)
Translates to: RYQPGVVDRWFDGCGHRASWVDA*ALGDAG
Trigger: CCCAGCATCTCCCAGTGCCCAAGCATCTACCCAGCT...TGCCCTGTGGCCACACCCATCAAACCACCTGTCTACAACTCCCGGCTGGTATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533620.5
CDS-3UTR CCA 90 bp GTATATAGAAGGCATGATTCCCTTCCTTCCAGGGGGAATACAGGGCCAGCTGGAGCTCCTCGAGGTCACTaGGCTCATCGGCCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: VYRRHDSLPSRGNTGPAGAPRGH*AHRPLQ
Trigger: CTGGAGGGGCCGATGAGCCCAGTGACCTCGAGGAGC...TCCAGCTGGCCCTGTATTCCCCCTGGAAGGAAGGGAATCATGCCTTCTATATAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CCA 90 bp GGGGTTCTAAAGAGGATCCTGGCAGCCCAGGGTGCCCAAATGCCTGGGATGCCAGGAGTTGTAGACAGGTaGTTTGATGGGTGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: GVLKRILAAQGAQMPGMPGVVDR*FDGCGH
Trigger: GTGGCCACACCCATCAAACCACCTGTCTACAACTCC...TGGCATCCCAGGCATTTGGGCACCCTGGGCTGCCAGGATCCTCTTTAGAACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533620.5
CDS-3UTR CCA 90 bp CCCCAGCCAAATGGCTGTCCCCAGAAGCCCACGGATGAGTTGGAGAATAACAGCCACTGCACTCCAGCCTaGGCTGGAGCAAGACTGTCT +
Preference number: 4 (lower is better)
Translates to: PQPNGCPQKPTDELENNSHCTPA*AGARLS
Trigger: AGACAGTCTTGCTCCAGCCCAGGCTGGAGTGCAGTG...GCTGTTATTCTCCAACTCATCCGTGGGCTTCTGGGGACAGCCATTTGGCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR TCA 90 bp GGTGGTTTGATGGGTGTGGCCACAGGGCAGTTGATTCGCTTCTCCTTTTGGCGTATCATGGCAGGTCCTTaGCTCAGGTGGCATGGCCGA +
Preference number: 4 (lower is better)
Translates to: GGLMGVATGQLIRFSFWRIMAGP*LRWHGR
Trigger: TCGGCCATGCCACCTGAGTCAAGGACCTGCCATGAT...ACGCCAAAAGGAGAAGCGAATCAACTGCCCTGTGGCCACACCCATCAAACCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533620.5
CDS-3UTR TCA 90 bp GGGTTGTGGCCAAGTTCAGAGTCAAAACTATTATCTCCCCTTCTGGTGTTTGGCGGGGCCCAGAGACCCTaGGGGAGATACCAGCCGGGA +
Preference number: 4 (lower is better)
Translates to: GLWPSSESKLLSPLLVFGGAQRP*GRYQPG
Trigger: TCCCGGCTGGTATCTCCCTCAGGGTCTCTGGGCCCC...GCCAAACACCAGAAGGGGAGATAATAGTTTTGACTCTGAACTTGGCCACAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR TCA 90 bp CTTCCTTTTCTGCTGCCAGGAGAAAGGAGAGGGGACAGGATAAAGAGAAACACAGGGGCCCAGAGACCCTaGGGGAGATACCAGCCGGGA +
Preference number: 4 (lower is better)
Translates to: LPFLLPGERRGDRIKRNTGAQRP*GRYQPG
Trigger: TCCCGGCTGGTATCTCCCTCAGGGTCTCTGGGCCCC...TGTGTTTCTCTTTATCCTGTCCCCTCTCCTTTCTCCTGGCAGCAGAAAAGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR TCA 90 bp CACAGTTTGGATCTCCGGAGGCCCTTGCTCTTGAAGAAGACAAGAGTCTGGGTTAGCACTTCGGGACGCTaGGGTGGGTGGATCAGGAGG +
Preference number: 4 (lower is better)
Translates to: HSLDLRRPLLLKKTRVWVSTSGR*GGWIRR
Trigger: CCTCCTGATCCACCCACCTCAGCGTCCCGAAGTGCT...AACCCAGACTCTTGTCTTCTTCAAGAGCAAGGGCCTCCGGAGATCCAAACTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR GCA 90 bp CCCCAGCCAAATGGCTGTCCCCAGAAGCCCACGGATGAGTTGGAGAATAACAGCCAGGAGATGAAGGCCTaGTGTTGTTCCCAGGGGAAC +
Preference number: 4 (lower is better)
Translates to: PQPNGCPQKPTDELENNSQEMKA*CCSQGN
Trigger: GTTCCCCTGGGAACAACAGCAGGCCTTCATCTCCTG...GCTGTTATTCTCCAACTCATCCGTGGGCTTCTGGGGACAGCCATTTGGCTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR GCA 90 bp AGTCCTGAGCCAGGAGATGAAGGCCTGCTGTTGTTCCCAGGGGAACAGGATGACCAGGAGATGAAGGCCTaGTGTTGTTCCCAGGGGAAC +
Preference number: 4 (lower is better)
Translates to: SPEPGDEGLLLFPGEQDDQEMKA*CCSQGN
Trigger: GTTCCCCTGGGAACAACAGCAGGCCTTCATCTCCTG...GTCATCCTGTTCCCCTGGGAACAACAGCAGGCCTTCATCTCCTGGCTCAGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533620.5
CDS-3UTR GCA 90 bp AAAGAGGATCCTGGCAGCCCAGGGTGCCCAAATGCCTGGGATGCCAGTCCCGGCGGCGGAGTTCACTGCTaGTTTGGAGTTATTTTGAGA +
Preference number: 4 (lower is better)
Translates to: KEDPGSPGCPNAWDASPGGGVHC*FGVILR
Trigger: TCTCAAAATAACTCCAAAGCAGCAGTGAACTCCGCC...GCCGGGACTGGCATCCCAGGCATTTGGGCACCCTGGGCTGCCAGGATCCTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533620.5
CDS-3UTR CCA 90 bp CACAGTTTGGATCTCCGGAGGCCCTTGCTCTTGAAGAAGACAAGAGTCTGGGTTAGGTGGCATGGCCGATaGGAGAGGGTCTGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: HSLDLRRPLLLKKTRVWVRWHGR*ERVCCR
Trigger: CCTGCAGCAGACCCTCTCCCATCGGCCATGCCACCT...AACCCAGACTCTTGTCTTCTTCAAGAGCAAGGGCCTCCGGAGATCCAAACTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CCA 90 bp AAAGAGGATCCTGGCAGCCCAGGGTGCCCAAATGCCTGGGATGCCAGTCCCGGCTTTAGCCCAGACATTTaGTTTCCGGACATCATGGCA +
Preference number: 4 (lower is better)
Translates to: KEDPGSPGCPNAWDASPGFSPDI*FPDIMA
Trigger: TGCCATGATGTCCGGAAACCAAATGTCTGGGCTAAA...GCCGGGACTGGCATCCCAGGCATTTGGGCACCCTGGGCTGCCAGGATCCTCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533620.5
CDS-3UTR CCA 90 bp GGTGGGGTTCTAAAGAGGATCCTGGCAGCCCAGGGTGCCCAAATGCCTGGGATGACCGCTTTGTTGCTGTaGAAAGGGGAGGAGATTTGG +
Preference number: 4 (lower is better)
Translates to: GGVLKRILAAQGAQMPGMTALLL*KGEEIW
Trigger: CCAAATCTCCTCCCCTTTCCACAGCAACAAAGCGGT...CATCCCAGGCATTTGGGCACCCTGGGCTGCCAGGATCCTCTTTAGAACCCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533620.5
CDS-3UTR CCA 90 bp GTATATAGAAGGCATGATTCCCTTCCTTCCAGGGGGAATACAGGGCCAGCTGGAGGCACCCCAGCCAAATaGCTGTCCCCAGAAGCCCAC +
Preference number: 4 (lower is better)
Translates to: VYRRHDSLPSRGNTGPAGGTPAK*LSPEAH
Trigger: GTGGGCTTCTGGGGACAGCCATTTGGCTGGGGTGCC...TCCAGCTGGCCCTGTATTCCCCCTGGAAGGAAGGGAATCATGCCTTCTATATAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR TCA 90 bp CTTCCTTTTCTGCTGCCAGGAGAAAGGAGAGGGGACAGGATAAAGAGAAACACACTGGCTCCACCTGGCTaGGAGTGCTGCGAGCATCCG +
Preference number: 4 (lower is better)
Translates to: LPFLLPGERRGDRIKRNTLAPPG*ECCEHP
Trigger: CGGATGCTCGCAGCACTCTCAGCCAGGTGGAGCCAG...TGTGTTTCTCTTTATCCTGTCCCCTCTCCTTTCTCCTGGCAGCAGAAAAGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR TCA 90 bp GGTGGTTTGATGGGTGTGGCCACAGGGCAGTTGATTCGCTTCTCCTTTTGGCGTCCCAGGGGAACAGGATaGCGTTACTGTTCCAGGCAT +
Preference number: 4 (lower is better)
Translates to: GGLMGVATGQLIRFSFWRPRGTG*RYCSRH
Trigger: ATGCCTGGAACAGTAACGTCATCCTGTTCCCCTGGG...ACGCCAAAAGGAGAAGCGAATCAACTGCCCTGTGGCCACACCCATCAAACCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533620.5
CDS-3UTR GCA 90 bp CCCCAGCCAAATGGCTGTCCCCAGAAGCCCACGGATGAGTTGGAGAATAACAGCAGGAGACCGCTTTGTTaGTGTGGAAAGGGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: PQPNGCPQKPTDELENNSRRPLC*CGKGRR
Trigger: TCTCCTCCCCTTTCCACAGCAACAAAGCGGTCTCCT...GCTGTTATTCTCCAACTCATCCGTGGGCTTCTGGGGACAGCCATTTGGCTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR GCA 90 bp AGTCCTGAGCCAGGAGATGAAGGCCTGCTGTTGTTCCCAGGGGAACAGGATGACAGGAGACCGCTTTGTTaGTGTGGAAAGGGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: SPEPGDEGLLLFPGEQDDRRPLC*CGKGRR
Trigger: TCTCCTCCCCTTTCCACAGCAACAAAGCGGTCTCCT...GTCATCCTGTTCCCCTGGGAACAACAGCAGGCCTTCATCTCCTGGCTCAGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533620.5
CDS-3UTR GCA 90 bp TGGTTCAATCACAGTTTGGATCTCCGGAGGCCCTTGCTCTTGAAGAAGACAAGACCCAGGGTGCCCAAATaGCTGGGATGCCAGTCCCGG +
Preference number: 4 (lower is better)
Translates to: WFNHSLDLRRPLLLKKTRPRVPK*LGCQSR
Trigger: CCGGGACTGGCATCCCAGGCATTTGGGCACCCTGGG...TCTTGTCTTCTTCAAGAGCAAGGGCCTCCGGAGATCCAAACTGTGATTGAACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CCA 90 bp AGTCCTGAGCCAGGAGATGAAGGCCTGCTGTTGTTCCCAGGGGAACAGGATGACGGTTTCCGGACATCATaGCAGGTCCTTGACTCAGGT +
Preference number: 4 (lower is better)
Translates to: SPEPGDEGLLLFPGEQDDGFRTS*QVLDSG
Trigger: ACCTGAGTCAAGGACCTGCCATGATGTCCGGAAACC...GTCATCCTGTTCCCCTGGGAACAACAGCAGGCCTTCATCTCCTGGCTCAGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533620.5
CDS-3UTR CCA 90 bp AGTCCTGAGCCAGGAGATGAAGGCCTGCTGTTGTTCCCAGGGGAACAGGATGACGATACAGACTGTAAGTaGCCGGGAACCAGCACAAGC +
Preference number: 4 (lower is better)
Translates to: SPEPGDEGLLLFPGEQDDDTDCK*PGTSTS
Trigger: GCTTGTGCTGGTTCCCGGCCACTTACAGTCTGTATC...GTCATCCTGTTCCCCTGGGAACAACAGCAGGCCTTCATCTCCTGGCTCAGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533620.5
CDS-3UTR CCA 90 bp GATAATGTTCCCAAAGAAGTCAACAAAGATTCCCAGCCCAGGCCAGGCGCGGTGCACTGCACTCCAGCCTaGGCTGGAGCAAGACTGTCT +
Preference number: 4 (lower is better)
Translates to: DNVPKEVNKDSQPRPGAVHCTPA*AGARLS
Trigger: AGACAGTCTTGCTCCAGCCCAGGCTGGAGTGCAGTG...CACCGCGCCTGGCCTGGGCTGGGAATCTTTGTTGACTTCTTTGGGAACATTATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR TCA 90 bp AGTTATTTTGAGATGCAGTGGGGCTGCTGGCGTGGAGTCCTGAGCCAGGAGATGAGATGGTGGTCTGGCTaGAGTCGTTGCCATACAGCT +
Preference number: 4 (lower is better)
Translates to: SYFEMQWGCWRGVLSQEMRWWSG*SRCHTA
Trigger: AGCTGTATGGCAACGACTTCAGCCAGACCACCATCT...CATCTCCTGGCTCAGGACTCCACGCCAGCAGCCCCACTGCATCTCAAAATAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533620.5
CDS-3UTR TCA 90 bp AGATGCTGGGATGCTTCCAGGTGGGGTTCTAAAGAGGATCCTGGCAGCCCAGGGCATCCCCACTCATCTTaGTATCTGTGTGCATGGACT +
Preference number: 4 (lower is better)
Translates to: RCWDASRWGSKEDPGSPGHPHSS*YLCAWT
Trigger: AGTCCATGCACACAGATATCAAGATGAGTGGGGATG...CCCTGGGCTGCCAGGATCCTCTTTAGAACCCCACCTGGAAGCATCCCAGCATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533620.5
CDS-3UTR GCA 90 bp GATAATGTTCCCAAAGAAGTCAACAAAGATTCCCAGCCCAGGCCAGGCGCGGTGTGGGAGAGGGTCTGCTaGAGGGAGTCACTGAGATCT +
Preference number: 4 (lower is better)
Translates to: DNVPKEVNKDSQPRPGAVWERVC*RESLRS
Trigger: AGATCTCAGTGACTCCCTGCAGCAGACCCTCTCCCA...CACCGCGCCTGGCCTGGGCTGGGAATCTTTGTTGACTTCTTTGGGAACATTATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR GCA 90 bp GGAGTTCACTGCTGCTTTGGAGTTATTTTGAGATGCAGTGGGGCTGCTGGCGTGTGGGAGAGGGTCTGCTaGAGGGAGTCACTGAGATCT +
Preference number: 4 (lower is better)
Translates to: GVHCCFGVILRCSGAAGVWERVC*RESLRS
Trigger: AGATCTCAGTGACTCCCTGCAGCAGACCCTCTCCCA...CACGCCAGCAGCCCCACTGCATCTCAAAATAACTCCAAAGCAGCAGTGAACTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533620.5
CDS-3UTR GCA 90 bp CTTCCTTTTCTGCTGCCAGGAGAAAGGAGAGGGGACAGGATAAAGAGAAACACACCCAAATGCCTGGGATaGCAGTCCCGGCCCAGTCTG +
Preference number: 4 (lower is better)
Translates to: LPFLLPGERRGDRIKRNTPKCLG*QSRPSL
Trigger: CAGACTGGGCCGGGACTGGCATCCCAGGCATTTGGG...TGTGTTTCTCTTTATCCTGTCCCCTCTCCTTTCTCCTGGCAGCAGAAAAGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CCA 90 bp GGGTTGTGGCCAAGTTCAGAGTCAAAACTATTATCTCCCCTTCTGGTGTTTGGCAGGTGGCATGGCCGATaGGAGAGGGTCTGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: GLWPSSESKLLSPLLVFGRWHGR*ERVCCR
Trigger: CCTGCAGCAGACCCTCTCCCATCGGCCATGCCACCT...GCCAAACACCAGAAGGGGAGATAATAGTTTTGACTCTGAACTTGGCCACAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CCA 90 bp CACAGTTTGGATCTCCGGAGGCCCTTGCTCTTGAAGAAGACAAGAGTCTGGGTTTTGACTCAGGTGGCATaGCCGATGGGAGAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: HSLDLRRPLLLKKTRVWVLTQVA*PMGEGL
Trigger: CAGACCCTCTCCCATCGGCCATGCCACCTGAGTCAA...AACCCAGACTCTTGTCTTCTTCAAGAGCAAGGGCCTCCGGAGATCCAAACTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CCA 90 bp GGGTTGTGGCCAAGTTCAGAGTCAAAACTATTATCTCCCCTTCTGGTGTTTGGCTCCCGGCCCAGTCTGTaGGAGGAGGAGACCGCTTTG +
Preference number: 4 (lower is better)
Translates to: GLWPSSESKLLSPLLVFGSRPSL*EEETAL
Trigger: CAAAGCGGTCTCCTCCTCCCACAGACTGGGCCGGGA...GCCAAACACCAGAAGGGGAGATAATAGTTTTGACTCTGAACTTGGCCACAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CCA 90 bp CACAGTTTGGATCTCCGGAGGCCCTTGCTCTTGAAGAAGACAAGAGTCTGGGTTAGCTGGGTAGATGCTTaGGCACTGGGAGATGCTGGG +
Preference number: 4 (lower is better)
Translates to: HSLDLRRPLLLKKTRVWVSWVDA*ALGDAG
Trigger: CCCAGCATCTCCCAGTGCCCAAGCATCTACCCAGCT...AACCCAGACTCTTGTCTTCTTCAAGAGCAAGGGCCTCCGGAGATCCAAACTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CCA 90 bp TTGGTCTCGATGCTGGTCCGTTTCTTTCTCTTCCTACCAAATACTTCACTGAGGGCTCCTCGAGGTCACTaGGCTCATCGGCCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: LVSMLVRFFLFLPNTSLRAPRGH*AHRPLQ
Trigger: CTGGAGGGGCCGATGAGCCCAGTGACCTCGAGGAGC...CCTCAGTGAAGTATTTGGTAGGAAGAGAAAGAAACGGACCAGCATCGAGACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533620.5
CDS-3UTR CCA 90 bp GGTGGTTTGATGGGTGTGGCCACAGGGCAGTTGATTCGCTTCTCCTTTTGGCGTACTGCTCTGCAATCATaGAGATCTCCTCCGAGCTGG +
Preference number: 4 (lower is better)
Translates to: GGLMGVATGQLIRFSFWRTALQS*RSPPSW
Trigger: CCAGCTCGGAGGAGATCTCCATGATTGCAGAGCAGT...ACGCCAAAAGGAGAAGCGAATCAACTGCCCTGTGGCCACACCCATCAAACCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533620.5
CDS-3UTR CCA 90 bp CTTCCTTTTCTGCTGCCAGGAGAAAGGAGAGGGGACAGGATAAAGAGAAACACAGTGGGGCTGCTGGCGTaGAGTCCTGAGCCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: LPFLLPGERRGDRIKRNTVGLLA*SPEPGD
Trigger: ATCTCCTGGCTCAGGACTCCACGCCAGCAGCCCCAC...TGTGTTTCTCTTTATCCTGTCCCCTCTCCTTTCTCCTGGCAGCAGAAAAGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CCA 90 bp AGTTATTTTGAGATGCAGTGGGGCTGCTGGCGTGGAGTCCTGAGCCAGGAGATGTATTTTGAGATGCAGTaGGGCTGCTGGCGTGGAGTC +
Preference number: 4 (lower is better)
Translates to: SYFEMQWGCWRGVLSQEMYFEMQ*GCWRGV
Trigger: GACTCCACGCCAGCAGCCCCACTGCATCTCAAAATA...CATCTCCTGGCTCAGGACTCCACGCCAGCAGCCCCACTGCATCTCAAAATAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000533620.5
CDS-3UTR TCA 90 bp AAGGCAATCTGTCTGTATATAGAAGGCATGATTCCCTTCCTTCCAGGGGGAATACTGGCTCCACCTGGCTaGGAGTGCTGCGAGCATCCG +
Preference number: 4 (lower is better)
Translates to: KAICLYIEGMIPFLPGGILAPPG*ECCEHP
Trigger: CGGATGCTCGCAGCACTCTCAGCCAGGTGGAGCCAG...TATTCCCCCTGGAAGGAAGGGAATCATGCCTTCTATATACAGACAGATTGCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR TCA 90 bp GATAATGTTCCCAAAGAAGTCAACAAAGATTCCCAGCCCAGGCCAGGCGCGGTGAGATGGTGGTCTGGCTaGAGTCGTTGCCATACAGCT +
Preference number: 4 (lower is better)
Translates to: DNVPKEVNKDSQPRPGAVRWWSG*SRCHTA
Trigger: AGCTGTATGGCAACGACTTCAGCCAGACCACCATCT...CACCGCGCCTGGCCTGGGCTGGGAATCTTTGTTGACTTCTTTGGGAACATTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR TCA 90 bp CACAGTTTGGATCTCCGGAGGCCCTTGCTCTTGAAGAAGACAAGAGTCTGGGTTCCCAGGGGAACAGGATaGCGTTACTGTTCCAGGCAT +
Preference number: 4 (lower is better)
Translates to: HSLDLRRPLLLKKTRVWVPRGTG*RYCSRH
Trigger: ATGCCTGGAACAGTAACGTCATCCTGTTCCCCTGGG...AACCCAGACTCTTGTCTTCTTCAAGAGCAAGGGCCTCCGGAGATCCAAACTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR TCA 90 bp GTATATAGAAGGCATGATTCCCTTCCTTCCAGGGGGAATACAGGGCCAGCTGGAGGAGGCCCTTGCTCTTaGAGAAGACAAGAGTCTGGG +
Preference number: 4 (lower is better)
Translates to: VYRRHDSLPSRGNTGPAGGGPCS*RRQESG
Trigger: CCCAGACTCTTGTCTTCTTCAAGAGCAAGGGCCTCC...TCCAGCTGGCCCTGTATTCCCCCTGGAAGGAAGGGAATCATGCCTTCTATATAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR GCA 90 bp GTTAAAACTGGAGGCGGAGTTCACTGCTGCTTTGGAGTTATTTTGAGATGCAGTCCCAGGGTGCCCAAATaGCTGGGATGCCAGTCCCGG +
Preference number: 4 (lower is better)
Translates to: VKTGGGVHCCFGVILRCSPRVPK*LGCQSR
Trigger: CCGGGACTGGCATCCCAGGCATTTGGGCACCCTGGG...ACTGCATCTCAAAATAACTCCAAAGCAGCAGTGAACTCCGCCTCCAGTTTTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533620.5
CDS-3UTR GCA 90 bp GGCACTGGGAGATGCTGGGATGCTTCCAGGTGGGGTTCTAAAGAGGATCCTGGCTTCTCCATGGACAACTaGTCTGCAATCATGGAGATC +
Preference number: 4 (lower is better)
Translates to: GTGRCWDASRWGSKEDPGFSMDN*SAIMEI
Trigger: GATCTCCATGATTGCAGAGCAGTTGTCCATGGAGAA...GCCAGGATCCTCTTTAGAACCCCACCTGGAAGCATCCCAGCATCTCCCAGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533620.5
CDS-3UTR GCA 90 bp GGGCTGTGTATTTCAAGAGCATTAGGAGTCTGCACTTGGTTCAATCACAGTTTGGGCACCAGCAGGCGTTaGAACATGCCCAGGGCACCC +
Preference number: 4 (lower is better)
Translates to: GLCISRALGVCTWFNHSLGTSRR*NMPRAP
Trigger: GGGTGCCCTGGGCATGTTGCAACGCCTGCTGGTGCC...CAAACTGTGATTGAACCAAGTGCAGACTCCTAATGCTCTTGAAATACACAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR GCA 90 bp TTGGTCTCGATGCTGGTCCGTTTCTTTCTCTTCCTACCAAATACTTCACTGAGGCCAGATTCACCATCCTaGCCCAGGCGGGGCCAAAGC +
Preference number: 4 (lower is better)
Translates to: LVSMLVRFFLFLPNTSLRPDSPS*PRRGQS
Trigger: GCTTTGGCCCCGCCTGGGGCAGGATGGTGAATCTGG...CCTCAGTGAAGTATTTGGTAGGAAGAGAAAGAAACGGACCAGCATCGAGACCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533620.5
CDS-3UTR GCA 90 bp GTGTATTTCAAGAGCATTAGGAGTCTGCACTTGGTTCAATCACAGTTTGGATCTCCCAGCCGGGGCCCCTaGGAAGCCAGGGTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: VYFKSIRSLHLVQSQFGSPSRGP*EARVSF
Trigger: GAAGGAGACCCTGGCTTCGCAGGGGCCCCGGCTGGG...AGATCCAAACTGTGATTGAACCAAGTGCAGACTCCTAATGCTCTTGAAATACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543440.7
CDS-3UTR CCA 90 bp TTGGTCTCGATGCTGGTCCGTTTCTTTCTCTTCCTACCAAATACTTCACTGAGGAGGTGGCATGGCCGATaGGAGAGGGTCTGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: LVSMLVRFFLFLPNTSLRRWHGR*ERVCCR
Trigger: CCTGCAGCAGACCCTCTCCCATCGGCCATGCCACCT...CCTCAGTGAAGTATTTGGTAGGAAGAGAAAGAAACGGACCAGCATCGAGACCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533620.5
CDS-3UTR CCA 90 bp GTATATAGAAGGCATGATTCCCTTCCTTCCAGGGGGAATACAGGGCCAGCTGGAAAAGGGGAGGAGATTTaGCTGCAGACCTTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: VYRRHDSLPSRGNTGPAGKGEEI*LQTLLP
Trigger: GGGCAGCAAGGTCTGCAGCCAAATCTCCTCCCCTTT...TCCAGCTGGCCCTGTATTCCCCCTGGAAGGAAGGGAATCATGCCTTCTATATAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CCA 90 bp TTTGGGATCAGTTCAGGGGTTGTGGCCAAGTTCAGAGTCAAAACTATTATCTCCGCTCCTCGAGGTCACTaGGCTCATCGGCCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: FGISSGVVAKFRVKTIISAPRGH*AHRPLQ
Trigger: CTGGAGGGGCCGATGAGCCCAGTGACCTCGAGGAGC...GGAGATAATAGTTTTGACTCTGAACTTGGCCACAACCCCTGAACTGATCCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CCA 90 bp GGGCTGTGTATTTCAAGAGCATTAGGAGTCTGCACTTGGTTCAATCACAGTTTGGGCTGGGGTAGGAGCTaGGCGTGCTCACTGAGGGGT +
Preference number: 4 (lower is better)
Translates to: GLCISRALGVCTWFNHSLGWGRS*ACSLRG
Trigger: ACCCCTCAGTGAGCACGCCCAGCTCCTACCCCAGCC...CAAACTGTGATTGAACCAAGTGCAGACTCCTAATGCTCTTGAAATACACAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CCA 90 bp ATTGCCACAGTGAAGCTGGCTAAAATATTTGGAACTAGAAGGCAAGGGCATAGGGGCTGGGGTAGGAGCTaGGCGTGCTCACTGAGGGGT +
Preference number: 4 (lower is better)
Translates to: IATVKLAKIFGTRRQGHRGWGRS*ACSLRG
Trigger: ACCCCTCAGTGAGCACGCCCAGCTCCTACCCCAGCC...CCTATGCCCTTGCCTTCTAGTTCCAAATATTTTAGCCAGCTTCACTGTGGCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CCA 90 bp CACAGTTTGGATCTCCGGAGGCCCTTGCTCTTGAAGAAGACAAGAGTCTGGGTTGAGTCAGGCGGATGTTaGTCTCGATGCTGGTCCGTT +
Preference number: 4 (lower is better)
Translates to: HSLDLRRPLLLKKTRVWVESGGC*SRCWSV
Trigger: AACGGACCAGCATCGAGACCAACATCCGCCTGACTC...AACCCAGACTCTTGTCTTCTTCAAGAGCAAGGGCCTCCGGAGATCCAAACTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CCA 90 bp GGCACTGGGAGATGCTGGGATGCTTCCAGGTGGGGTTCTAAAGAGGATCCTGGCAGATCTCCTCCGAGCTaGGTTTTGGGTTATCTTGAA +
Preference number: 4 (lower is better)
Translates to: GTGRCWDASRWGSKEDPGRSPPS*VLGYLE
Trigger: TTCAAGATAACCCAAAACCCAGCTCGGAGGAGATCT...GCCAGGATCCTCTTTAGAACCCCACCTGGAAGCATCCCAGCATCTCCCAGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533620.5
CDS-3UTR CCA 90 bp GATAATGTTCCCAAAGAAGTCAACAAAGATTCCCAGCCCAGGCCAGGCGCGGTGACTGCTCTGCAATCATaGAGATCTCCTCCGAGCTGG +
Preference number: 4 (lower is better)
Translates to: DNVPKEVNKDSQPRPGAVTALQS*RSPPSW
Trigger: CCAGCTCGGAGGAGATCTCCATGATTGCAGAGCAGT...CACCGCGCCTGGCCTGGGCTGGGAATCTTTGTTGACTTCTTTGGGAACATTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CCA 90 bp GTATATAGAAGGCATGATTCCCTTCCTTCCAGGGGGAATACAGGGCCAGCTGGATCCCCTTCTGGTGTTTaGCACCCCAGCCAAATGGCT +
Preference number: 4 (lower is better)
Translates to: VYRRHDSLPSRGNTGPAGSPSGV*HPSQMA
Trigger: AGCCATTTGGCTGGGGTGCCAAACACCAGAAGGGGA...TCCAGCTGGCCCTGTATTCCCCCTGGAAGGAAGGGAATCATGCCTTCTATATAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CCA 90 bp TGGTTCAATCACAGTTTGGATCTCCGGAGGCCCTTGCTCTTGAAGAAGACAAGATTCGGGACGCTGAGGTaGGTGGATCAGGAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: WFNHSLDLRRPLLLKKTRFGTLR*VDQEVR
Trigger: CCTGACCTCCTGATCCACCCACCTCAGCGTCCCGAA...TCTTGTCTTCTTCAAGAGCAAGGGCCTCCGGAGATCCAAACTGTGATTGAACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR TCA 90 bp TGGTTCAATCACAGTTTGGATCTCCGGAGGCCCTTGCTCTTGAAGAAGACAAGATGCCCAGGCTGGGTCTaGGATAGCAGGAACTGGGAT +
Preference number: 4 (lower is better)
Translates to: WFNHSLDLRRPLLLKKTRCPGWV*DSRNWD
Trigger: ATCCCAGTTCCTGCTATCTCAGACCCAGCCTGGGCA...TCTTGTCTTCTTCAAGAGCAAGGGCCTCCGGAGATCCAAACTGTGATTGAACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR TCA 90 bp CTTCCTTTTCTGCTGCCAGGAGAAAGGAGAGGGGACAGGATAAAGAGAAACACATGTAGACAGGTGGTTTaGTGGGTGTGGCCACAGGGC +
Preference number: 4 (lower is better)
Translates to: LPFLLPGERRGDRIKRNTCRQVV*WVWPQG
Trigger: GCCCTGTGGCCACACCCATCAAACCACCTGTCTACA...TGTGTTTCTCTTTATCCTGTCCCCTCTCCTTTCTCCTGGCAGCAGAAAAGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR TCA 90 bp GATGCTGGTCCGTTTCTTTCTCTTCCTACCAAATACTTCACTGAGGCTGGGGTATGTAGACAGGTGGTTTaGTGGGTGTGGCCACAGGGC +
Preference number: 4 (lower is better)
Translates to: DAGPFLSLPTKYFTEAGVCRQVV*WVWPQG
Trigger: GCCCTGTGGCCACACCCATCAAACCACCTGTCTACA...TACCCCAGCCTCAGTGAAGTATTTGGTAGGAAGAGAAAGAAACGGACCAGCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533620.5
CDS-3UTR TCA 90 bp GATAATGTTCCCAAAGAAGTCAACAAAGATTCCCAGCCCAGGCCAGGCGCGGTGGCTTTGGAGTTATTTTaGGATGCAGTGGGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: DNVPKEVNKDSQPRPGAVALELF*DAVGLL
Trigger: CAGCAGCCCCACTGCATCTCAAAATAACTCCAAAGC...CACCGCGCCTGGCCTGGGCTGGGAATCTTTGTTGACTTCTTTGGGAACATTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR GCA 90 bp CTTCCTTTTCTGCTGCCAGGAGAAAGGAGAGGGGACAGGATAAAGAGAAACACACGATGGGAGAGGGTCTaGTGCAGGGAGTCACTGAGA +
Preference number: 4 (lower is better)
Translates to: LPFLLPGERRGDRIKRNTRWERV*CRESLR
Trigger: TCTCAGTGACTCCCTGCAGCAGACCCTCTCCCATCG...TGTGTTTCTCTTTATCCTGTCCCCTCTCCTTTCTCCTGGCAGCAGAAAAGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR GCA 90 bp GGGCTGTGTATTTCAAGAGCATTAGGAGTCTGCACTTGGTTCAATCACAGTTTGCCCAAATGCCTGGGATaGCAGTCCCGGCCCAGTCTG +
Preference number: 4 (lower is better)
Translates to: GLCISRALGVCTWFNHSLPKCLG*QSRPSL
Trigger: CAGACTGGGCCGGGACTGGCATCCCAGGCATTTGGG...CAAACTGTGATTGAACCAAGTGCAGACTCCTAATGCTCTTGAAATACACAGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR GCA 90 bp GAAAGGGCTATATACAGGTACTTTGCCACCATCATTGTTGTGTGTTTGCTCTTGCCCAGGGTGCCCAAATaGCTGGGATGCCAGTCCCGG +
Preference number: 4 (lower is better)
Translates to: ERAIYRYFATIIVVCLLLPRVPK*LGCQSR
Trigger: CCGGGACTGGCATCCCAGGCATTTGGGCACCCTGGG...CAAGAGCAAACACACAACAATGATGGTGGCAAAGTACCTGTATATAGCCCTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR GCA 90 bp AAGGCAATCTGTCTGTATATAGAAGGCATGATTCCCTTCCTTCCAGGGGGAATAGAGATGCAGTGGGGCTaGTGGCGTGGAGTCCTGAGC +
Preference number: 4 (lower is better)
Translates to: KAICLYIEGMIPFLPGGIEMQWG*WRGVLS
Trigger: GCTCAGGACTCCACGCCAGCAGCCCCACTGCATCTC...TATTCCCCCTGGAAGGAAGGGAATCATGCCTTCTATATACAGACAGATTGCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR GCA 90 bp TTTGGGATCAGTTCAGGGGTTGTGGCCAAGTTCAGAGTCAAAACTATTATCTCCGCAGGCGTTGCAACATaGCCAGGGCACCCACCAAGG +
Preference number: 4 (lower is better)
Translates to: FGISSGVVAKFRVKTIISAGVAT*PGHPPR
Trigger: CCTTGGTGGGTGCCCTGGGCATGTTGCAACGCCTGC...GGAGATAATAGTTTTGACTCTGAACTTGGCCACAACCCCTGAACTGATCCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR GCA 90 bp GATAATGTTCCCAAAGAAGTCAACAAAGATTCCCAGCCCAGGCCAGGCGCGGTGTTCTTCCTTTTCTGCTaGCAGGAGAAAGGAGAGGGG +
Preference number: 4 (lower is better)
Translates to: DNVPKEVNKDSQPRPGAVFFLFC*QEKGEG
Trigger: CCCCTCTCCTTTCTCCTGGCAGCAGAAAAGGAAGAA...CACCGCGCCTGGCCTGGGCTGGGAATCTTTGTTGACTTCTTTGGGAACATTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR GCA 90 bp CTTCCTTTTCTGCTGCCAGGAGAAAGGAGAGGGGACAGGATAAAGAGAAACACACCAAGATCATGCCACTaGACTCCAGCCTGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: LPFLLPGERRGDRIKRNTPRSCH*TPAWAG
Trigger: TCCAGCCCAGGCTGGAGTGCAGTGGCATGATCTTGG...TGTGTTTCTCTTTATCCTGTCCCCTCTCCTTTCTCCTGGCAGCAGAAAAGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR GCA 90 bp AAGGCAATCTGTCTGTATATAGAAGGCATGATTCCCTTCCTTCCAGGGGGAATACCAGATTCACCATCCTaGCCCAGGCGGGGCCAAAGC +
Preference number: 4 (lower is better)
Translates to: KAICLYIEGMIPFLPGGIPDSPS*PRRGQS
Trigger: GCTTTGGCCCCGCCTGGGGCAGGATGGTGAATCTGG...TATTCCCCCTGGAAGGAAGGGAATCATGCCTTCTATATACAGACAGATTGCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543440.7
CDS-3UTR CCA 90 bp GTATATAGAAGGCATGATTCCCTTCCTTCCAGGGGGAATACAGGGCCAGCTGGAGGTTTCCGGACATCATaGCAGGTCCTTGACTCAGGT +
Preference number: 4 (lower is better)
Translates to: VYRRHDSLPSRGNTGPAGGFRTS*QVLDSG
Trigger: ACCTGAGTCAAGGACCTGCCATGATGTCCGGAAACC...TCCAGCTGGCCCTGTATTCCCCCTGGAAGGAAGGGAATCATGCCTTCTATATAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CCA 90 bp TTGGTCTCGATGCTGGTCCGTTTCTTTCTCTTCCTACCAAATACTTCACTGAGGACCAGCACAAGCTGCTaGAGCGGATGGAGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: LVSMLVRFFLFLPNTSLRTSTSC*SGWREA
Trigger: GGCTTCCCTCCATCCGCTCCAGCAGCTTGTGCTGGT...CCTCAGTGAAGTATTTGGTAGGAAGAGAAAGAAACGGACCAGCATCGAGACCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533620.5
CDS-3UTR CCA 90 bp TTTGGGATCAGTTCAGGGGTTGTGGCCAAGTTCAGAGTCAAAACTATTATCTCCTCCCGGCCCAGTCTGTaGGAGGAGGAGACCGCTTTG +
Preference number: 4 (lower is better)
Translates to: FGISSGVVAKFRVKTIISSRPSL*EEETAL
Trigger: CAAAGCGGTCTCCTCCTCCCACAGACTGGGCCGGGA...GGAGATAATAGTTTTGACTCTGAACTTGGCCACAACCCCTGAACTGATCCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CCA 90 bp GGTGGTTTGATGGGTGTGGCCACAGGGCAGTTGATTCGCTTCTCCTTTTGGCGTTGTTGGTCTCGATGCTaGTCCGTTTCTTTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: GGLMGVATGQLIRFSFWRCWSRC*SVSFSS
Trigger: GGAAGAGAAAGAAACGGACCAGCATCGAGACCAACA...ACGCCAAAAGGAGAAGCGAATCAACTGCCCTGTGGCCACACCCATCAAACCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533620.5
CDS-3UTR CCA 90 bp GTATATAGAAGGCATGATTCCCTTCCTTCCAGGGGGAATACAGGGCCAGCTGGAACTGCTCTGCAATCATaGAGATCTCCTCCGAGCTGG +
Preference number: 4 (lower is better)
Translates to: VYRRHDSLPSRGNTGPAGTALQS*RSPPSW
Trigger: CCAGCTCGGAGGAGATCTCCATGATTGCAGAGCAGT...TCCAGCTGGCCCTGTATTCCCCCTGGAAGGAAGGGAATCATGCCTTCTATATAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CCA 90 bp GTATATAGAAGGCATGATTCCCTTCCTTCCAGGGGGAATACAGGGCCAGCTGGATATTTTGAGATGCAGTaGGGCTGCTGGCGTGGAGTC +
Preference number: 4 (lower is better)
Translates to: VYRRHDSLPSRGNTGPAGYFEMQ*GCWRGV
Trigger: GACTCCACGCCAGCAGCCCCACTGCATCTCAAAATA...TCCAGCTGGCCCTGTATTCCCCCTGGAAGGAAGGGAATCATGCCTTCTATATAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CCA 90 bp GTATATAGAAGGCATGATTCCCTTCCTTCCAGGGGGAATACAGGGCCAGCTGGAGGTTCAATCACAGTTTaGATCTCCGGAGGCCCTTGC +
Preference number: 4 (lower is better)
Translates to: VYRRHDSLPSRGNTGPAGGSITV*ISGGPC
Trigger: GCAAGGGCCTCCGGAGATCCAAACTGTGATTGAACC...TCCAGCTGGCCCTGTATTCCCCCTGGAAGGAAGGGAATCATGCCTTCTATATAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CCA 90 bp GATAATGTTCCCAAAGAAGTCAACAAAGATTCCCAGCCCAGGCCAGGCGCGGTGTATTATCTCCCCTTCTaGTGTTTGGCACCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: DNVPKEVNKDSQPRPGAVYYLPF*CLAPQP
Trigger: TGGCTGGGGTGCCAAACACCAGAAGGGGAGATAATA...CACCGCGCCTGGCCTGGGCTGGGAATCTTTGTTGACTTCTTTGGGAACATTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CCA 90 bp CTTCCTTTTCTGCTGCCAGGAGAAAGGAGAGGGGACAGGATAAAGAGAAACACAAGCCCTAGGCAGACGTaGACAGACAGAAGGGCACCA +
Preference number: 4 (lower is better)
Translates to: LPFLLPGERRGDRIKRNTSPRQT*TDRRAP
Trigger: TGGTGCCCTTCTGTCTGTCCACGTCTGCCTAGGGCT...TGTGTTTCTCTTTATCCTGTCCCCTCTCCTTTCTCCTGGCAGCAGAAAAGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR TCA 90 bp GGTGGTTTGATGGGTGTGGCCACAGGGCAGTTGATTCGCTTCTCCTTTTGGCGTGGTTTTGGGTTATCTTaGAACCTCTTCTCCAGAGTC +
Preference number: 4 (lower is better)
Translates to: GGLMGVATGQLIRFSFWRGFGLS*NLFSRV
Trigger: GACTCTGGAGAAGAGGTTTCAAGATAACCCAAAACC...ACGCCAAAAGGAGAAGCGAATCAACTGCCCTGTGGCCACACCCATCAAACCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533620.5
CDS-3UTR TCA 90 bp GGAGTTCACTGCTGCTTTGGAGTTATTTTGAGATGCAGTGGGGCTGCTGGCGTGTCGGTACCAAGATCCTaGAGAGTTAAAACTGGAGGC +
Preference number: 4 (lower is better)
Translates to: GVHCCFGVILRCSGAAGVSVPRS*RVKTGG
Trigger: GCCTCCAGTTTTAACTCTTCAGGATCTTGGTACCGA...CACGCCAGCAGCCCCACTGCATCTCAAAATAACTCCAAAGCAGCAGTGAACTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000533620.5
CDS-3UTR TCA 90 bp GGGTTGTGGCCAAGTTCAGAGTCAAAACTATTATCTCCCCTTCTGGTGTTTGGCAAGAACAAGCACTCCTaGGCCCTAGGCAGACGTGGA +
Preference number: 4 (lower is better)
Translates to: GLWPSSESKLLSPLLVFGKNKHS*ALGRRG
Trigger: TCCACGTCTGCCTAGGGCTCAGGAGTGCTTGTTCTT...GCCAAACACCAGAAGGGGAGATAATAGTTTTGACTCTGAACTTGGCCACAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR TCA 90 bp TGGTTCAATCACAGTTTGGATCTCCGGAGGCCCTTGCTCTTGAAGAAGACAAGAGGCAGGAGAATCGCTTaGACCCAAGTGGCAGAGCAT +
Preference number: 4 (lower is better)
Translates to: WFNHSLDLRRPLLLKKTRGRRIA*TQVAEH
Trigger: ATGCTCTGCCACTTGGGTTCAAGCGATTCTCCTGCC...TCTTGTCTTCTTCAAGAGCAAGGGCCTCCGGAGATCCAAACTGTGATTGAACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR GCA 90 bp ATTGCCACAGTGAAGCTGGCTAAAATATTTGGAACTAGAAGGCAAGGGCATAGGGGGAGGAGATTTGGCTaGAGACCTTGCTGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: IATVKLAKIFGTRRQGHRGRRFG*RPCCPG
Trigger: GCCTGGGCAGCAAGGTCTGCAGCCAAATCTCCTCCC...CCTATGCCCTTGCCTTCTAGTTCCAAATATTTTAGCCAGCTTCACTGTGGCAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR GCA 90 bp GGGTTGTGGCCAAGTTCAGAGTCAAAACTATTATCTCCCCTTCTGGTGTTTGGCCAGGAGATGAAGGCCTaGTGTTGTTCCCAGGGGAAC +
Preference number: 4 (lower is better)
Translates to: GLWPSSESKLLSPLLVFGQEMKA*CCSQGN
Trigger: GTTCCCCTGGGAACAACAGCAGGCCTTCATCTCCTG...GCCAAACACCAGAAGGGGAGATAATAGTTTTGACTCTGAACTTGGCCACAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR GCA 90 bp GAAAGGGCTATATACAGGTACTTTGCCACCATCATTGTTGTGTGTTTGCTCTTGGAGATGCAGTGGGGCTaGTGGCGTGGAGTCCTGAGC +
Preference number: 4 (lower is better)
Translates to: ERAIYRYFATIIVVCLLLEMQWG*WRGVLS
Trigger: GCTCAGGACTCCACGCCAGCAGCCCCACTGCATCTC...CAAGAGCAAACACACAACAATGATGGTGGCAAAGTACCTGTATATAGCCCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR GCA 90 bp CCCCAGCCAAATGGCTGTCCCCAGAAGCCCACGGATGAGTTGGAGAATAACAGCAGAGCATTAGGAGTCTaGACTTGGTTCAATCACAGT +
Preference number: 4 (lower is better)
Translates to: PQPNGCPQKPTDELENNSRALGV*TWFNHS
Trigger: ACTGTGATTGAACCAAGTGCAGACTCCTAATGCTCT...GCTGTTATTCTCCAACTCATCCGTGGGCTTCTGGGGACAGCCATTTGGCTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CCA 90 bp ATTGCCACAGTGAAGCTGGCTAAAATATTTGGAACTAGAAGGCAAGGGCATAGGACCAGCACAAGCTGCTaGAGCGGATGGAGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: IATVKLAKIFGTRRQGHRTSTSC*SGWREA
Trigger: GGCTTCCCTCCATCCGCTCCAGCAGCTTGTGCTGGT...CCTATGCCCTTGCCTTCTAGTTCCAAATATTTTAGCCAGCTTCACTGTGGCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CCA 90 bp AAGGCAATCTGTCTGTATATAGAAGGCATGATTCCCTTCCTTCCAGGGGGAATAACCAGCACAAGCTGCTaGAGCGGATGGAGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: KAICLYIEGMIPFLPGGITSTSC*SGWREA
Trigger: GGCTTCCCTCCATCCGCTCCAGCAGCTTGTGCTGGT...TATTCCCCCTGGAAGGAAGGGAATCATGCCTTCTATATACAGACAGATTGCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CCA 90 bp GGGTTGTGGCCAAGTTCAGAGTCAAAACTATTATCTCCCCTTCTGGTGTTTGGCAAAGGGGAGGAGATTTaGCTGCAGACCTTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: GLWPSSESKLLSPLLVFGKGEEI*LQTLLP
Trigger: GGGCAGCAAGGTCTGCAGCCAAATCTCCTCCCCTTT...GCCAAACACCAGAAGGGGAGATAATAGTTTTGACTCTGAACTTGGCCACAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CCA 90 bp GTATATAGAAGGCATGATTCCCTTCCTTCCAGGGGGAATACAGGGCCAGCTGGACTCAGTGGAGGTAGGTaGAATGATTCCATCGGTACC +
Preference number: 4 (lower is better)
Translates to: VYRRHDSLPSRGNTGPAGLSGGR*NDSIGT
Trigger: GGTACCGATGGAATCATTCCACCTACCTCCACTGAG...TCCAGCTGGCCCTGTATTCCCCCTGGAAGGAAGGGAATCATGCCTTCTATATAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CCA 90 bp GTATATAGAAGGCATGATTCCCTTCCTTCCAGGGGGAATACAGGGCCAGCTGGATATTATCTCCCCTTCTaGTGTTTGGCACCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: VYRRHDSLPSRGNTGPAGYYLPF*CLAPQP
Trigger: TGGCTGGGGTGCCAAACACCAGAAGGGGAGATAATA...TCCAGCTGGCCCTGTATTCCCCCTGGAAGGAAGGGAATCATGCCTTCTATATAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CCA 90 bp CACAGTTTGGATCTCCGGAGGCCCTTGCTCTTGAAGAAGACAAGAGTCTGGGTTAAATCCCAGCCCATGTaGGAACTCTGGAAGGTAGCA +
Preference number: 4 (lower is better)
Translates to: HSLDLRRPLLLKKTRVWVKSQPM*ELWKVA
Trigger: TGCTACCTTCCAGAGTTCCCACATGGGCTGGGATTT...AACCCAGACTCTTGTCTTCTTCAAGAGCAAGGGCCTCCGGAGATCCAAACTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CCA 90 bp GGGCTGTGTATTTCAAGAGCATTAGGAGTCTGCACTTGGTTCAATCACAGTTTGTTCGGGACGCTGAGGTaGGTGGATCAGGAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: GLCISRALGVCTWFNHSLFGTLR*VDQEVR
Trigger: CCTGACCTCCTGATCCACCCACCTCAGCGTCCCGAA...CAAACTGTGATTGAACCAAGTGCAGACTCCTAATGCTCTTGAAATACACAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR TCA 90 bp GGGCTGTGTATTTCAAGAGCATTAGGAGTCTGCACTTGGTTCAATCACAGTTTGATCATGGCAGGTCCTTaGCTCAGGTGGCATGGCCGA +
Preference number: 4 (lower is better)
Translates to: GLCISRALGVCTWFNHSLIMAGP*LRWHGR
Trigger: TCGGCCATGCCACCTGAGTCAAGGACCTGCCATGAT...CAAACTGTGATTGAACCAAGTGCAGACTCCTAATGCTCTTGAAATACACAGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR TCA 90 bp CTTCCTTTTCTGCTGCCAGGAGAAAGGAGAGGGGACAGGATAAAGAGAAACACATACCAAATACTTCACTaGGGCTGGGGTAGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: LPFLLPGERRGDRIKRNTYQILH*GWGRSW
Trigger: CCAGCTCCTACCCCAGCCTCAGTGAAGTATTTGGTA...TGTGTTTCTCTTTATCCTGTCCCCTCTCCTTTCTCCTGGCAGCAGAAAAGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR TCA 90 bp GATGCTGGTCCGTTTCTTTCTCTTCCTACCAAATACTTCACTGAGGCTGGGGTATACCAAATACTTCACTaGGGCTGGGGTAGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: DAGPFLSLPTKYFTEAGVYQILH*GWGRSW
Trigger: CCAGCTCCTACCCCAGCCTCAGTGAAGTATTTGGTA...TACCCCAGCCTCAGTGAAGTATTTGGTAGGAAGAGAAAGAAACGGACCAGCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533620.5
CDS-3UTR GCA 90 bp CCCCAGCCAAATGGCTGTCCCCAGAAGCCCACGGATGAGTTGGAGAATAACAGCTCTTCGGTTTTAATCTaGCTGTTGAAATCTAGGCCA +
Preference number: 4 (lower is better)
Translates to: PQPNGCPQKPTDELENNSSSVLI*LLKSRP
Trigger: TGGCCTAGATTTCAACAGGCAGATTAAAACCGAAGA...GCTGTTATTCTCCAACTCATCCGTGGGCTTCTGGGGACAGCCATTTGGCTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR GCA 90 bp AGATACCAGCCGGGAGTTGTAGACAGGTGGTTTGATGGGTGTGGCCACAGGGCATCTTCGGTTTTAATCTaGCTGTTGAAATCTAGGCCA +
Preference number: 4 (lower is better)
Translates to: RYQPGVVDRWFDGCGHRASSVLI*LLKSRP
Trigger: TGGCCTAGATTTCAACAGGCAGATTAAAACCGAAGA...TGCCCTGTGGCCACACCCATCAAACCACCTGTCTACAACTCCCGGCTGGTATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533620.5
CDS-3UTR GCA 90 bp GTGTATTTCAAGAGCATTAGGAGTCTGCACTTGGTTCAATCACAGTTTGGATCTGGTAGGAGCTGGGCGTaGTCACTGAGGGGTCTGACG +
Preference number: 4 (lower is better)
Translates to: VYFKSIRSLHLVQSQFGSGRSWA*SLRGLT
Trigger: CGTCAGACCCCTCAGTGAGCACGCCCAGCTCCTACC...AGATCCAAACTGTGATTGAACCAAGTGCAGACTCCTAATGCTCTTGAAATACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR GCA 90 bp GATAATGTTCCCAAAGAAGTCAACAAAGATTCCCAGCCCAGGCCAGGCGCGGTGTTCTCCATGGACAACTaGTCTGCAATCATGGAGATC +
Preference number: 4 (lower is better)
Translates to: DNVPKEVNKDSQPRPGAVFSMDN*SAIMEI
Trigger: GATCTCCATGATTGCAGAGCAGTTGTCCATGGAGAA...CACCGCGCCTGGCCTGGGCTGGGAATCTTTGTTGACTTCTTTGGGAACATTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR GCA 90 bp GATGCTGGTCCGTTTCTTTCTCTTCCTACCAAATACTTCACTGAGGCTGGGGTAGGAGTTATTTTGAGATaGAGTGGGGCTGCTGGCGTG +
Preference number: 4 (lower is better)
Translates to: DAGPFLSLPTKYFTEAGVGVILR*SGAAGV
Trigger: CACGCCAGCAGCCCCACTGCATCTCAAAATAACTCC...TACCCCAGCCTCAGTGAAGTATTTGGTAGGAAGAGAAAGAAACGGACCAGCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000533620.5
CDS-3UTR GCA 90 bp CACAGTTTGGATCTCCGGAGGCCCTTGCTCTTGAAGAAGACAAGAGTCTGGGTTGGAGGCGGAGTTCACTaGTGCTTTGGAGTTATTTTG +
Preference number: 4 (lower is better)
Translates to: HSLDLRRPLLLKKTRVWVGGGVH*CFGVIL
Trigger: CAAAATAACTCCAAAGCAGCAGTGAACTCCGCCTCC...AACCCAGACTCTTGTCTTCTTCAAGAGCAAGGGCCTCCGGAGATCCAAACTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CCA 90 bp AAGGCAATCTGTCTGTATATAGAAGGCATGATTCCCTTCCTTCCAGGGGGAATATGCTGCGAGCATCCGTaGAATCGGCTACATCCCCAC +
Preference number: 4 (lower is better)
Translates to: KAICLYIEGMIPFLPGGICCEHP*NRLHPH
Trigger: GTGGGGATGTAGCCGATTCCACGGATGCTCGCAGCA...TATTCCCCCTGGAAGGAAGGGAATCATGCCTTCTATATACAGACAGATTGCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CCA 90 bp AAGGCAATCTGTCTGTATATAGAAGGCATGATTCCCTTCCTTCCAGGGGGAATATTTCCTGGCTCCACCTaGCTGAGAGTGCTGCGAGCA +
Preference number: 4 (lower is better)
Translates to: KAICLYIEGMIPFLPGGIFPGST*LRVLRA
Trigger: TGCTCGCAGCACTCTCAGCCAGGTGGAGCCAGGAAA...TATTCCCCCTGGAAGGAAGGGAATCATGCCTTCTATATACAGACAGATTGCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CCA 90 bp AAGGCAATCTGTCTGTATATAGAAGGCATGATTCCCTTCCTTCCAGGGGGAATATTGACTCAGGTGGCATaGCCGATGGGAGAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: KAICLYIEGMIPFLPGGILTQVA*PMGEGL
Trigger: CAGACCCTCTCCCATCGGCCATGCCACCTGAGTCAA...TATTCCCCCTGGAAGGAAGGGAATCATGCCTTCTATATACAGACAGATTGCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CCA 90 bp CTTCCTTTTCTGCTGCCAGGAGAAAGGAGAGGGGACAGGATAAAGAGAAACACAGATACAGACTGTAAGTaGCCGGGAACCAGCACAAGC +
Preference number: 4 (lower is better)
Translates to: LPFLLPGERRGDRIKRNTDTDCK*PGTSTS
Trigger: GCTTGTGCTGGTTCCCGGCCACTTACAGTCTGTATC...TGTGTTTCTCTTTATCCTGTCCCCTCTCCTTTCTCCTGGCAGCAGAAAAGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CCA 90 bp ATTGCCACAGTGAAGCTGGCTAAAATATTTGGAACTAGAAGGCAAGGGCATAGGAGCTGGGTAGATGCTTaGGCACTGGGAGATGCTGGG +
Preference number: 4 (lower is better)
Translates to: IATVKLAKIFGTRRQGHRSWVDA*ALGDAG
Trigger: CCCAGCATCTCCCAGTGCCCAAGCATCTACCCAGCT...CCTATGCCCTTGCCTTCTAGTTCCAAATATTTTAGCCAGCTTCACTGTGGCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CCA 90 bp GTATATAGAAGGCATGATTCCCTTCCTTCCAGGGGGAATACAGGGCCAGCTGGATGTTGGTCTCGATGCTaGTCCGTTTCTTTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: VYRRHDSLPSRGNTGPAGCWSRC*SVSFSS
Trigger: GGAAGAGAAAGAAACGGACCAGCATCGAGACCAACA...TCCAGCTGGCCCTGTATTCCCCCTGGAAGGAAGGGAATCATGCCTTCTATATAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CCA 90 bp TTGGTCTCGATGCTGGTCCGTTTCTTTCTCTTCCTACCAAATACTTCACTGAGGGAGTCAGGCGGATGTTaGTCTCGATGCTGGTCCGTT +
Preference number: 4 (lower is better)
Translates to: LVSMLVRFFLFLPNTSLRESGGC*SRCWSV
Trigger: AACGGACCAGCATCGAGACCAACATCCGCCTGACTC...CCTCAGTGAAGTATTTGGTAGGAAGAGAAAGAAACGGACCAGCATCGAGACCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533620.5
CDS-3UTR CCA 90 bp GGGTTGTGGCCAAGTTCAGAGTCAAAACTATTATCTCCCCTTCTGGTGTTTGGCTATTTTGAGATGCAGTaGGGCTGCTGGCGTGGAGTC +
Preference number: 4 (lower is better)
Translates to: GLWPSSESKLLSPLLVFGYFEMQ*GCWRGV
Trigger: GACTCCACGCCAGCAGCCCCACTGCATCTCAAAATA...GCCAAACACCAGAAGGGGAGATAATAGTTTTGACTCTGAACTTGGCCACAACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
3UTR CAA 72 bp GGGGCTGTGTATTTCAAGAGCATTAGGAGTCTGCACTaGGTTCAATCACAGTTTGGATCTCCGGAGGCCCTT +
Preference number: 4 (lower is better)
Translates to: GAVYFKSIRSLH*VQSQFGSPEAL
Trigger: AAGGGCCTCCGGAGATCCAAACTGTGATTGAACCAAGTGCAGACTCCTAATGCTCTTGAAATACACAGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR TCA 90 bp ATTGCCACAGTGAAGCTGGCTAAAATATTTGGAACTAGAAGGCAAGGGCATAGGCCCAGGGGAACAGGATaGCGTTACTGTTCCAGGCAT +
Preference number: 4 (lower is better)
Translates to: IATVKLAKIFGTRRQGHRPRGTG*RYCSRH
Trigger: ATGCCTGGAACAGTAACGTCATCCTGTTCCCCTGGG...CCTATGCCCTTGCCTTCTAGTTCCAAATATTTTAGCCAGCTTCACTGTGGCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR TCA 90 bp CTTCCTTTTCTGCTGCCAGGAGAAAGGAGAGGGGACAGGATAAAGAGAAACACAGCTTTGGAGTTATTTTaGGATGCAGTGGGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: LPFLLPGERRGDRIKRNTALELF*DAVGLL
Trigger: CAGCAGCCCCACTGCATCTCAAAATAACTCCAAAGC...TGTGTTTCTCTTTATCCTGTCCCCTCTCCTTTCTCCTGGCAGCAGAAAAGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR TCA 90 bp ATTGCCACAGTGAAGCTGGCTAAAATATTTGGAACTAGAAGGCAAGGGCATAGGGGCAGGAGAATCGCTTaGACCCAAGTGGCAGAGCAT +
Preference number: 4 (lower is better)
Translates to: IATVKLAKIFGTRRQGHRGRRIA*TQVAEH
Trigger: ATGCTCTGCCACTTGGGTTCAAGCGATTCTCCTGCC...CCTATGCCCTTGCCTTCTAGTTCCAAATATTTTAGCCAGCTTCACTGTGGCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR TCA 90 bp TCAGAAAACTTAGCTGTACAGAGAAAACATCAAGGCTTTGGTGGAGATATCAGAAGCACTTCGGGACGCTaGGGTGGGTGGATCAGGAGG +
Preference number: 4 (lower is better)
Translates to: SENLAVQRKHQGFGGDIRSTSGR*GGWIRR
Trigger: CCTCCTGATCCACCCACCTCAGCGTCCCGAAGTGCT...TCTGATATCTCCACCAAAGCCTTGATGTTTTCTCTGTACAGCTAAGTTTTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR GCA 90 bp CACAGTTTGGATCTCCGGAGGCCCTTGCTCTTGAAGAAGACAAGAGTCTGGGTTTTCTCCATGGACAACTaGTCTGCAATCATGGAGATC +
Preference number: 4 (lower is better)
Translates to: HSLDLRRPLLLKKTRVWVFSMDN*SAIMEI
Trigger: GATCTCCATGATTGCAGAGCAGTTGTCCATGGAGAA...AACCCAGACTCTTGTCTTCTTCAAGAGCAAGGGCCTCCGGAGATCCAAACTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR GCA 90 bp GAAAGGGCTATATACAGGTACTTTGCCACCATCATTGTTGTGTGTTTGCTCTTGCCAAGATCATGCCACTaGACTCCAGCCTGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: ERAIYRYFATIIVVCLLLPRSCH*TPAWAG
Trigger: TCCAGCCCAGGCTGGAGTGCAGTGGCATGATCTTGG...CAAGAGCAAACACACAACAATGATGGTGGCAAAGTACCTGTATATAGCCCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CCA 90 bp TGGTTCAATCACAGTTTGGATCTCCGGAGGCCCTTGCTCTTGAAGAAGACAAGAACCGCTTTGTTGCTGTaGAAAGGGGAGGAGATTTGG +
Preference number: 4 (lower is better)
Translates to: WFNHSLDLRRPLLLKKTRTALLL*KGEEIW
Trigger: CCAAATCTCCTCCCCTTTCCACAGCAACAAAGCGGT...TCTTGTCTTCTTCAAGAGCAAGGGCCTCCGGAGATCCAAACTGTGATTGAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CCA 90 bp GGGTTGTGGCCAAGTTCAGAGTCAAAACTATTATCTCCCCTTCTGGTGTTTGGCTGGGATGCTTCCAGGTaGGGTTCTAAAGAGGATCCT +
Preference number: 4 (lower is better)
Translates to: GLWPSSESKLLSPLLVFGWDASR*GSKEDP
Trigger: AGGATCCTCTTTAGAACCCCACCTGGAAGCATCCCA...GCCAAACACCAGAAGGGGAGATAATAGTTTTGACTCTGAACTTGGCCACAACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CCA 90 bp TTTGGGATCAGTTCAGGGGTTGTGGCCAAGTTCAGAGTCAAAACTATTATCTCCGAGTCAGGCGGATGTTaGTCTCGATGCTGGTCCGTT +
Preference number: 4 (lower is better)
Translates to: FGISSGVVAKFRVKTIISESGGC*SRCWSV
Trigger: AACGGACCAGCATCGAGACCAACATCCGCCTGACTC...GGAGATAATAGTTTTGACTCTGAACTTGGCCACAACCCCTGAACTGATCCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CCA 90 bp CACAGTTTGGATCTCCGGAGGCCCTTGCTCTTGAAGAAGACAAGAGTCTGGGTTAGATCTCCTCCGAGCTaGGTTTTGGGTTATCTTGAA +
Preference number: 4 (lower is better)
Translates to: HSLDLRRPLLLKKTRVWVRSPPS*VLGYLE
Trigger: TTCAAGATAACCCAAAACCCAGCTCGGAGGAGATCT...AACCCAGACTCTTGTCTTCTTCAAGAGCAAGGGCCTCCGGAGATCCAAACTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CCA 90 bp TCAGAAAACTTAGCTGTACAGAGAAAACATCAAGGCTTTGGTGGAGATATCAGAGTGGGGCTGCTGGCGTaGAGTCCTGAGCCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: SENLAVQRKHQGFGGDIRVGLLA*SPEPGD
Trigger: ATCTCCTGGCTCAGGACTCCACGCCAGCAGCCCCAC...TCTGATATCTCCACCAAAGCCTTGATGTTTTCTCTGTACAGCTAAGTTTTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CCA 90 bp CACAGTTTGGATCTCCGGAGGCCCTTGCTCTTGAAGAAGACAAGAGTCTGGGTTTCAGTTCAGGGGTTGTaGCCAAGTTCAGAGTCAAAA +
Preference number: 4 (lower is better)
Translates to: HSLDLRRPLLLKKTRVWVSVQGL*PSSESK
Trigger: TTTTGACTCTGAACTTGGCCACAACCCCTGAACTGA...AACCCAGACTCTTGTCTTCTTCAAGAGCAAGGGCCTCCGGAGATCCAAACTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CCA 90 bp GGGTTGTGGCCAAGTTCAGAGTCAAAACTATTATCTCCCCTTCTGGTGTTTGGCAAATCCCAGCCCATGTaGGAACTCTGGAAGGTAGCA +
Preference number: 4 (lower is better)
Translates to: GLWPSSESKLLSPLLVFGKSQPM*ELWKVA
Trigger: TGCTACCTTCCAGAGTTCCCACATGGGCTGGGATTT...GCCAAACACCAGAAGGGGAGATAATAGTTTTGACTCTGAACTTGGCCACAACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
3UTR CAA 72 bp AGAGCATTAGGAGTCTGCACTTGGTTCAATCACAGTTaGGATCTCCGGAGGCCCTTGCTCTTGAAGAAGACA +
Preference number: 4 (lower is better)
Translates to: RALGVCTWFNHS*DLRRPLLLKKT
Trigger: TGTCTTCTTCAAGAGCAAGGGCCTCCGGAGATCCAAACTGTGATTGAACCAAGTGCAGACTCCTAATGCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR TCA 90 bp GTGTATTTCAAGAGCATTAGGAGTCTGCACTTGGTTCAATCACAGTTTGGATCTTGCCCAGGCTGGGTCTaGGATAGCAGGAACTGGGAT +
Preference number: 4 (lower is better)
Translates to: VYFKSIRSLHLVQSQFGSCPGWV*DSRNWD
Trigger: ATCCCAGTTCCTGCTATCTCAGACCCAGCCTGGGCA...AGATCCAAACTGTGATTGAACCAAGTGCAGACTCCTAATGCTCTTGAAATACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR TCA 90 bp CTTCCTTTTCTGCTGCCAGGAGAAAGGAGAGGGGACAGGATAAAGAGAAACACATCGGTACCAAGATCCTaGAGAGTTAAAACTGGAGGC +
Preference number: 4 (lower is better)
Translates to: LPFLLPGERRGDRIKRNTSVPRS*RVKTGG
Trigger: GCCTCCAGTTTTAACTCTTCAGGATCTTGGTACCGA...TGTGTTTCTCTTTATCCTGTCCCCTCTCCTTTCTCCTGGCAGCAGAAAAGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR GCA 90 bp TTTGGGATCAGTTCAGGGGTTGTGGCCAAGTTCAGAGTCAAAACTATTATCTCCAGGAGACCGCTTTGTTaGTGTGGAAAGGGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: FGISSGVVAKFRVKTIISRRPLC*CGKGRR
Trigger: TCTCCTCCCCTTTCCACAGCAACAAAGCGGTCTCCT...GGAGATAATAGTTTTGACTCTGAACTTGGCCACAACCCCTGAACTGATCCCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR GCA 90 bp GGGTTGTGGCCAAGTTCAGAGTCAAAACTATTATCTCCCCTTCTGGTGTTTGGCAGCTTAATGCGCCTCTaGTTGAAGGTCTTGGCAAAC +
Preference number: 4 (lower is better)
Translates to: GLWPSSESKLLSPLLVFGSLMRL*LKVLAN
Trigger: GTTTGCCAAGACCTTCAAGCAGAGGCGCATTAAGCT...GCCAAACACCAGAAGGGGAGATAATAGTTTTGACTCTGAACTTGGCCACAACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR GCA 90 bp GATGCTGGTCCGTTTCTTTCTCTTCCTACCAAATACTTCACTGAGGCTGGGGTACATGGACAACTGCTCTaGAATCATGGAGATCTCCTC +
Preference number: 4 (lower is better)
Translates to: DAGPFLSLPTKYFTEAGVHGQLL*NHGDLL
Trigger: GAGGAGATCTCCATGATTGCAGAGCAGTTGTCCATG...TACCCCAGCCTCAGTGAAGTATTTGGTAGGAAGAGAAAGAAACGGACCAGCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533620.5
CDS-3UTR GCA 90 bp AAGGCAATCTGTCTGTATATAGAAGGCATGATTCCCTTCCTTCCAGGGGGAATAGGAGTTATTTTGAGATaGAGTGGGGCTGCTGGCGTG +
Preference number: 4 (lower is better)
Translates to: KAICLYIEGMIPFLPGGIGVILR*SGAAGV
Trigger: CACGCCAGCAGCCCCACTGCATCTCAAAATAACTCC...TATTCCCCCTGGAAGGAAGGGAATCATGCCTTCTATATACAGACAGATTGCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR GCA 90 bp ATTGCCACAGTGAAGCTGGCTAAAATATTTGGAACTAGAAGGCAAGGGCATAGGGGAGTTATTTTGAGATaGAGTGGGGCTGCTGGCGTG +
Preference number: 4 (lower is better)
Translates to: IATVKLAKIFGTRRQGHRGVILR*SGAAGV
Trigger: CACGCCAGCAGCCCCACTGCATCTCAAAATAACTCC...CCTATGCCCTTGCCTTCTAGTTCCAAATATTTTAGCCAGCTTCACTGTGGCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR GCA 90 bp GTATATAGAAGGCATGATTCCCTTCCTTCCAGGGGGAATACAGGGCCAGCTGGAAGAGCATTAGGAGTCTaGACTTGGTTCAATCACAGT +
Preference number: 4 (lower is better)
Translates to: VYRRHDSLPSRGNTGPAGRALGV*TWFNHS
Trigger: ACTGTGATTGAACCAAGTGCAGACTCCTAATGCTCT...TCCAGCTGGCCCTGTATTCCCCCTGGAAGGAAGGGAATCATGCCTTCTATATAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR GCA 90 bp GTATATAGAAGGCATGATTCCCTTCCTTCCAGGGGGAATACAGGGCCAGCTGGAATCTTGATATCTGTGTaGATGGACTCCAGATTCACC +
Preference number: 4 (lower is better)
Translates to: VYRRHDSLPSRGNTGPAGILISV*MDSRFT
Trigger: GGTGAATCTGGAGTCCATGCACACAGATATCAAGAT...TCCAGCTGGCCCTGTATTCCCCCTGGAAGGAAGGGAATCATGCCTTCTATATAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543440.7
CDS-3UTR CCA 90 bp GTGTATTTCAAGAGCATTAGGAGTCTGCACTTGGTTCAATCACAGTTTGGATCTTGCTGCGAGCATCCGTaGAATCGGCTACATCCCCAC +
Preference number: 4 (lower is better)
Translates to: VYFKSIRSLHLVQSQFGSCCEHP*NRLHPH
Trigger: GTGGGGATGTAGCCGATTCCACGGATGCTCGCAGCA...AGATCCAAACTGTGATTGAACCAAGTGCAGACTCCTAATGCTCTTGAAATACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CCA 90 bp TGGTTCAATCACAGTTTGGATCTCCGGAGGCCCTTGCTCTTGAAGAAGACAAGATGTCCTGACATGGGCTaGCATTTAGCCCAGACATTT +
Preference number: 4 (lower is better)
Translates to: WFNHSLDLRRPLLLKKTRCPDMG*HLAQTF
Trigger: AAATGTCTGGGCTAAATGCCAGCCCATGTCAGGACA...TCTTGTCTTCTTCAAGAGCAAGGGCCTCCGGAGATCCAAACTGTGATTGAACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CCA 90 bp ATTGCCACAGTGAAGCTGGCTAAAATATTTGGAACTAGAAGGCAAGGGCATAGGGATACAGACTGTAAGTaGCCGGGAACCAGCACAAGC +
Preference number: 4 (lower is better)
Translates to: IATVKLAKIFGTRRQGHRDTDCK*PGTSTS
Trigger: GCTTGTGCTGGTTCCCGGCCACTTACAGTCTGTATC...CCTATGCCCTTGCCTTCTAGTTCCAAATATTTTAGCCAGCTTCACTGTGGCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CCA 90 bp ATTGCCACAGTGAAGCTGGCTAAAATATTTGGAACTAGAAGGCAAGGGCATAGGGGAGTTGTAGACAGGTaGTTTGATGGGTGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: IATVKLAKIFGTRRQGHRGVVDR*FDGCGH
Trigger: GTGGCCACACCCATCAAACCACCTGTCTACAACTCC...CCTATGCCCTTGCCTTCTAGTTCCAAATATTTTAGCCAGCTTCACTGTGGCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR TCA 90 bp GAAAGGGCTATATACAGGTACTTTGCCACCATCATTGTTGTGTGTTTGCTCTTGAGATGGTGGTCTGGCTaGAGTCGTTGCCATACAGCT +
Preference number: 4 (lower is better)
Translates to: ERAIYRYFATIIVVCLLLRWWSG*SRCHTA
Trigger: AGCTGTATGGCAACGACTTCAGCCAGACCACCATCT...CAAGAGCAAACACACAACAATGATGGTGGCAAAGTACCTGTATATAGCCCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR TCA 90 bp CTTCCTTTTCTGCTGCCAGGAGAAAGGAGAGGGGACAGGATAAAGAGAAACACAGGTTTTGGGTTATCTTaGAACCTCTTCTCCAGAGTC +
Preference number: 4 (lower is better)
Translates to: LPFLLPGERRGDRIKRNTGFGLS*NLFSRV
Trigger: GACTCTGGAGAAGAGGTTTCAAGATAACCCAAAACC...TGTGTTTCTCTTTATCCTGTCCCCTCTCCTTTCTCCTGGCAGCAGAAAAGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR TCA 90 bp TCAGAAAACTTAGCTGTACAGAGAAAACATCAAGGCTTTGGTGGAGATATCAGATGTAGACAGGTGGTTTaGTGGGTGTGGCCACAGGGC +
Preference number: 4 (lower is better)
Translates to: SENLAVQRKHQGFGGDIRCRQVV*WVWPQG
Trigger: GCCCTGTGGCCACACCCATCAAACCACCTGTCTACA...TCTGATATCTCCACCAAAGCCTTGATGTTTTCTCTGTACAGCTAAGTTTTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR TCA 90 bp GTATATAGAAGGCATGATTCCCTTCCTTCCAGGGGGAATACAGGGCCAGCTGGAAGACTATTGCCACAGTaGAGCTGGCTAAAATATTTG +
Preference number: 4 (lower is better)
Translates to: VYRRHDSLPSRGNTGPAGRLLPQ*SWLKYL
Trigger: CAAATATTTTAGCCAGCTTCACTGTGGCAATAGTCT...TCCAGCTGGCCCTGTATTCCCCCTGGAAGGAAGGGAATCATGCCTTCTATATAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR GCA 90 bp CTTCCTTTTCTGCTGCCAGGAGAAAGGAGAGGGGACAGGATAAAGAGAAACACAGGCGGAGTTCACTGCTaGTTTGGAGTTATTTTGAGA +
Preference number: 4 (lower is better)
Translates to: LPFLLPGERRGDRIKRNTGGVHC*FGVILR
Trigger: TCTCAAAATAACTCCAAAGCAGCAGTGAACTCCGCC...TGTGTTTCTCTTTATCCTGTCCCCTCTCCTTTCTCCTGGCAGCAGAAAAGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR GCA 90 bp GATAATGTTCCCAAAGAAGTCAACAAAGATTCCCAGCCCAGGCCAGGCGCGGTGTATATACAGGTACTTTaGCACCATCATTGTTGTGTG +
Preference number: 4 (lower is better)
Translates to: DNVPKEVNKDSQPRPGAVYIQVL*HHHCCV
Trigger: CACACAACAATGATGGTGGCAAAGTACCTGTATATA...CACCGCGCCTGGCCTGGGCTGGGAATCTTTGTTGACTTCTTTGGGAACATTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CCA 90 bp GAAAGGGCTATATACAGGTACTTTGCCACCATCATTGTTGTGTGTTTGCTCTTGGGTTTCCGGACATCATaGCAGGTCCTTGACTCAGGT +
Preference number: 4 (lower is better)
Translates to: ERAIYRYFATIIVVCLLLGFRTS*QVLDSG
Trigger: ACCTGAGTCAAGGACCTGCCATGATGTCCGGAAACC...CAAGAGCAAACACACAACAATGATGGTGGCAAAGTACCTGTATATAGCCCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CCA 90 bp AAGGCAATCTGTCTGTATATAGAAGGCATGATTCCCTTCCTTCCAGGGGGAATATGGGATGCTTCCAGGTaGGGTTCTAAAGAGGATCCT +
Preference number: 4 (lower is better)
Translates to: KAICLYIEGMIPFLPGGIWDASR*GSKEDP
Trigger: AGGATCCTCTTTAGAACCCCACCTGGAAGCATCCCA...TATTCCCCCTGGAAGGAAGGGAATCATGCCTTCTATATACAGACAGATTGCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CCA 90 bp GGGCTGTGTATTTCAAGAGCATTAGGAGTCTGCACTTGGTTCAATCACAGTTTGCTCAGTGGAGGTAGGTaGAATGATTCCATCGGTACC +
Preference number: 4 (lower is better)
Translates to: GLCISRALGVCTWFNHSLLSGGR*NDSIGT
Trigger: GGTACCGATGGAATCATTCCACCTACCTCCACTGAG...CAAACTGTGATTGAACCAAGTGCAGACTCCTAATGCTCTTGAAATACACAGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CCA 90 bp GTGTATTTCAAGAGCATTAGGAGTCTGCACTTGGTTCAATCACAGTTTGGATCTTCCCCTTCTGGTGTTTaGCACCCCAGCCAAATGGCT +
Preference number: 4 (lower is better)
Translates to: VYFKSIRSLHLVQSQFGSSPSGV*HPSQMA
Trigger: AGCCATTTGGCTGGGGTGCCAAACACCAGAAGGGGA...AGATCCAAACTGTGATTGAACCAAGTGCAGACTCCTAATGCTCTTGAAATACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CCA 90 bp TCAGAAAACTTAGCTGTACAGAGAAAACATCAAGGCTTTGGTGGAGATATCAGAAGCCCTAGGCAGACGTaGACAGACAGAAGGGCACCA +
Preference number: 4 (lower is better)
Translates to: SENLAVQRKHQGFGGDIRSPRQT*TDRRAP
Trigger: TGGTGCCCTTCTGTCTGTCCACGTCTGCCTAGGGCT...TCTGATATCTCCACCAAAGCCTTGATGTTTTCTCTGTACAGCTAAGTTTTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR TCA 90 bp ATTGCCACAGTGAAGCTGGCTAAAATATTTGGAACTAGAAGGCAAGGGCATAGGTCGGTACCAAGATCCTaGAGAGTTAAAACTGGAGGC +
Preference number: 4 (lower is better)
Translates to: IATVKLAKIFGTRRQGHRSVPRS*RVKTGG
Trigger: GCCTCCAGTTTTAACTCTTCAGGATCTTGGTACCGA...CCTATGCCCTTGCCTTCTAGTTCCAAATATTTTAGCCAGCTTCACTGTGGCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR TCA 90 bp TCAGAAAACTTAGCTGTACAGAGAAAACATCAAGGCTTTGGTGGAGATATCAGAGGAGGCCCTTGCTCTTaGAGAAGACAAGAGTCTGGG +
Preference number: 4 (lower is better)
Translates to: SENLAVQRKHQGFGGDIRGGPCS*RRQESG
Trigger: CCCAGACTCTTGTCTTCTTCAAGAGCAAGGGCCTCC...TCTGATATCTCCACCAAAGCCTTGATGTTTTCTCTGTACAGCTAAGTTTTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR TCA 90 bp TCAGAAAACTTAGCTGTACAGAGAAAACATCAAGGCTTTGGTGGAGATATCAGAAAGAACAAGCACTCCTaGGCCCTAGGCAGACGTGGA +
Preference number: 4 (lower is better)
Translates to: SENLAVQRKHQGFGGDIRKNKHS*ALGRRG
Trigger: TCCACGTCTGCCTAGGGCTCAGGAGTGCTTGTTCTT...TCTGATATCTCCACCAAAGCCTTGATGTTTTCTCTGTACAGCTAAGTTTTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR GCA 90 bp ATTGCCACAGTGAAGCTGGCTAAAATATTTGGAACTAGAAGGCAAGGGCATAGGAGCTTAATGCGCCTCTaGTTGAAGGTCTTGGCAAAC +
Preference number: 4 (lower is better)
Translates to: IATVKLAKIFGTRRQGHRSLMRL*LKVLAN
Trigger: GTTTGCCAAGACCTTCAAGCAGAGGCGCATTAAGCT...CCTATGCCCTTGCCTTCTAGTTCCAAATATTTTAGCCAGCTTCACTGTGGCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR GCA 90 bp AAGGCAATCTGTCTGTATATAGAAGGCATGATTCCCTTCCTTCCAGGGGGAATACATGGACAACTGCTCTaGAATCATGGAGATCTCCTC +
Preference number: 4 (lower is better)
Translates to: KAICLYIEGMIPFLPGGIHGQLL*NHGDLL
Trigger: GAGGAGATCTCCATGATTGCAGAGCAGTTGTCCATG...TATTCCCCCTGGAAGGAAGGGAATCATGCCTTCTATATACAGACAGATTGCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR GCA 90 bp AAGGCAATCTGTCTGTATATAGAAGGCATGATTCCCTTCCTTCCAGGGGGAATAGGAGGCGGAGTTCACTaGTGCTTTGGAGTTATTTTG +
Preference number: 4 (lower is better)
Translates to: KAICLYIEGMIPFLPGGIGGGVH*CFGVIL
Trigger: CAAAATAACTCCAAAGCAGCAGTGAACTCCGCCTCC...TATTCCCCCTGGAAGGAAGGGAATCATGCCTTCTATATACAGACAGATTGCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR GCA 90 bp GATAATGTTCCCAAAGAAGTCAACAAAGATTCCCAGCCCAGGCCAGGCGCGGTGTCATTGTTGTGTGTTTaGTCTTGTGTTCTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: DNVPKEVNKDSQPRPGAVSLLCV*SCVLPF
Trigger: AAAAGGAAGAACACAAGAGCAAACACACAACAATGA...CACCGCGCCTGGCCTGGGCTGGGAATCTTTGTTGACTTCTTTGGGAACATTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CCA 90 bp GTGTATTTCAAGAGCATTAGGAGTCTGCACTTGGTTCAATCACAGTTTGGATCTGGAGTTGTAGACAGGTaGTTTGATGGGTGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: VYFKSIRSLHLVQSQFGSGVVDR*FDGCGH
Trigger: GTGGCCACACCCATCAAACCACCTGTCTACAACTCC...AGATCCAAACTGTGATTGAACCAAGTGCAGACTCCTAATGCTCTTGAAATACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CCA 90 bp GTATATAGAAGGCATGATTCCCTTCCTTCCAGGGGGAATACAGGGCCAGCTGGAACATCAAGGCTTTGGTaGAGATATCAGATTCAAATC +
Preference number: 4 (lower is better)
Translates to: VYRRHDSLPSRGNTGPAGTSRLW*RYQIQI
Trigger: GATTTGAATCTGATATCTCCACCAAAGCCTTGATGT...TCCAGCTGGCCCTGTATTCCCCCTGGAAGGAAGGGAATCATGCCTTCTATATAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
3UTR CAA 72 bp GCCCTTGCTCTTGAAGAAGACAAGAGTCTGGGTTCATaGATAGTGGAGATTTTCTTCCACTCTTCTGAAGGC +
Preference number: 4 (lower is better)
Translates to: ALALEEDKSLGS*IVEIFFHSSEG
Trigger: GCCTTCAGAAGAGTGGAAGAAAATCTCCACTATCAATGAACCCAGACTCTTGTCTTCTTCAAGAGCAAGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR TCA 90 bp AAGGCAATCTGTCTGTATATAGAAGGCATGATTCCCTTCCTTCCAGGGGGAATAGGTTTTGGGTTATCTTaGAACCTCTTCTCCAGAGTC +
Preference number: 4 (lower is better)
Translates to: KAICLYIEGMIPFLPGGIGFGLS*NLFSRV
Trigger: GACTCTGGAGAAGAGGTTTCAAGATAACCCAAAACC...TATTCCCCCTGGAAGGAAGGGAATCATGCCTTCTATATACAGACAGATTGCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR TCA 90 bp TGGTTCAATCACAGTTTGGATCTCCGGAGGCCCTTGCTCTTGAAGAAGACAAGATTTCTTCCACTCTTCTaGAGGCAATCTGTCTGTATA +
Preference number: 4 (lower is better)
Translates to: WFNHSLDLRRPLLLKKTRFLPLF*RQSVCI
Trigger: TATACAGACAGATTGCCTTCAGAAGAGTGGAAGAAA...TCTTGTCTTCTTCAAGAGCAAGGGCCTCCGGAGATCCAAACTGTGATTGAACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR TCA 90 bp CTTCCTTTTCTGCTGCCAGGAGAAAGGAGAGGGGACAGGATAAAGAGAAACACAAAGAAGTCTTTTCTCTaGAAGACTATTGCCACAGTG +
Preference number: 4 (lower is better)
Translates to: LPFLLPGERRGDRIKRNTKKSFL*KTIATV
Trigger: CACTGTGGCAATAGTCTTTCAGAGAAAAGACTTCTT...TGTGTTTCTCTTTATCCTGTCCCCTCTCCTTTCTCCTGGCAGCAGAAAAGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR TCA 90 bp TGGTTCAATCACAGTTTGGATCTCCGGAGGCCCTTGCTCTTGAAGAAGACAAGAAAGAAGTCTTTTCTCTaGAAGACTATTGCCACAGTG +
Preference number: 4 (lower is better)
Translates to: WFNHSLDLRRPLLLKKTRKKSFL*KTIATV
Trigger: CACTGTGGCAATAGTCTTTCAGAGAAAAGACTTCTT...TCTTGTCTTCTTCAAGAGCAAGGGCCTCCGGAGATCCAAACTGTGATTGAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR GCA 90 bp GAAAGGGCTATATACAGGTACTTTGCCACCATCATTGTTGTGTGTTTGCTCTTGCATGGACAACTGCTCTaGAATCATGGAGATCTCCTC +
Preference number: 4 (lower is better)
Translates to: ERAIYRYFATIIVVCLLLHGQLL*NHGDLL
Trigger: GAGGAGATCTCCATGATTGCAGAGCAGTTGTCCATG...CAAGAGCAAACACACAACAATGATGGTGGCAAAGTACCTGTATATAGCCCTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR GCA 90 bp AAGGCAATCTGTCTGTATATAGAAGGCATGATTCCCTTCCTTCCAGGGGGAATAGGCGGAGTTCACTGCTaGTTTGGAGTTATTTTGAGA +
Preference number: 4 (lower is better)
Translates to: KAICLYIEGMIPFLPGGIGGVHC*FGVILR
Trigger: TCTCAAAATAACTCCAAAGCAGCAGTGAACTCCGCC...TATTCCCCCTGGAAGGAAGGGAATCATGCCTTCTATATACAGACAGATTGCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR GCA 90 bp TTGGTCTCGATGCTGGTCCGTTTCTTTCTCTTCCTACCAAATACTTCACTGAGGATCTTGATATCTGTGTaGATGGACTCCAGATTCACC +
Preference number: 4 (lower is better)
Translates to: LVSMLVRFFLFLPNTSLRILISV*MDSRFT
Trigger: GGTGAATCTGGAGTCCATGCACACAGATATCAAGAT...CCTCAGTGAAGTATTTGGTAGGAAGAGAAAGAAACGGACCAGCATCGAGACCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533620.5
CDS-3UTR CCA 90 bp TTTGGGATCAGTTCAGGGGTTGTGGCCAAGTTCAGAGTCAAAACTATTATCTCCTCCTTTAGCAGTTCTTaGAGACTCCATGAAACCGGT +
Preference number: 4 (lower is better)
Translates to: FGISSGVVAKFRVKTIISSFSSS*RLHETG
Trigger: ACCGGTTTCATGGAGTCTCCAAGAACTGCTAAAGGA...GGAGATAATAGTTTTGACTCTGAACTTGGCCACAACCCCTGAACTGATCCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260264.8
CDS-3UTR CCA 90 bp ATTGCCACAGTGAAGCTGGCTAAAATATTTGGAACTAGAAGGCAAGGGCATAGGTTTAGCCCAGACATTTaGTTTCCGGACATCATGGCA +
Preference number: 4 (lower is better)
Translates to: IATVKLAKIFGTRRQGHRFSPDI*FPDIMA
Trigger: TGCCATGATGTCCGGAAACCAAATGTCTGGGCTAAA...CCTATGCCCTTGCCTTCTAGTTCCAAATATTTTAGCCAGCTTCACTGTGGCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CCA 90 bp GGGCTGTGTATTTCAAGAGCATTAGGAGTCTGCACTTGGTTCAATCACAGTTTGAGATCTCCTCCGAGCTaGGTTTTGGGTTATCTTGAA +
Preference number: 4 (lower is better)
Translates to: GLCISRALGVCTWFNHSLRSPPS*VLGYLE
Trigger: TTCAAGATAACCCAAAACCCAGCTCGGAGGAGATCT...CAAACTGTGATTGAACCAAGTGCAGACTCCTAATGCTCTTGAAATACACAGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CCA 90 bp GGGTTGTGGCCAAGTTCAGAGTCAAAACTATTATCTCCCCTTCTGGTGTTTGGCAGTTCACTGCTGCTTTaGAGTTATTTTGAGATGCAG +
Preference number: 4 (lower is better)
Translates to: GLWPSSESKLLSPLLVFGSSLLL*SYFEMQ
Trigger: CTGCATCTCAAAATAACTCCAAAGCAGCAGTGAACT...GCCAAACACCAGAAGGGGAGATAATAGTTTTGACTCTGAACTTGGCCACAACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CCA 90 bp GATGCTGGTCCGTTTCTTTCTCTTCCTACCAAATACTTCACTGAGGCTGGGGTAAGTTCACTGCTGCTTTaGAGTTATTTTGAGATGCAG +
Preference number: 4 (lower is better)
Translates to: DAGPFLSLPTKYFTEAGVSSLLL*SYFEMQ
Trigger: CTGCATCTCAAAATAACTCCAAAGCAGCAGTGAACT...TACCCCAGCCTCAGTGAAGTATTTGGTAGGAAGAGAAAGAAACGGACCAGCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533620.5
CDS-3UTR CCA 90 bp TGGTTCAATCACAGTTTGGATCTCCGGAGGCCCTTGCTCTTGAAGAAGACAAGATTAGGAGTCTGCACTTaGTTCAATCACAGTTTGGAT +
Preference number: 4 (lower is better)
Translates to: WFNHSLDLRRPLLLKKTRLGVCT*FNHSLD
Trigger: ATCCAAACTGTGATTGAACCAAGTGCAGACTCCTAA...TCTTGTCTTCTTCAAGAGCAAGGGCCTCCGGAGATCCAAACTGTGATTGAACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CCA 90 bp CACAGTTTGGATCTCCGGAGGCCCTTGCTCTTGAAGAAGACAAGAGTCTGGGTTAAAACATCAAGGCTTTaGTGGAGATATCAGATTCAA +
Preference number: 4 (lower is better)
Translates to: HSLDLRRPLLLKKTRVWVKTSRL*WRYQIQ
Trigger: TTGAATCTGATATCTCCACCAAAGCCTTGATGTTTT...AACCCAGACTCTTGTCTTCTTCAAGAGCAAGGGCCTCCGGAGATCCAAACTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR GCA 90 bp TCAGAAAACTTAGCTGTACAGAGAAAACATCAAGGCTTTGGTGGAGATATCAGATTCTTCCTTTTCTGCTaGCAGGAGAAAGGAGAGGGG +
Preference number: 4 (lower is better)
Translates to: SENLAVQRKHQGFGGDIRFFLFC*QEKGEG
Trigger: CCCCTCTCCTTTCTCCTGGCAGCAGAAAAGGAAGAA...TCTGATATCTCCACCAAAGCCTTGATGTTTTCTCTGTACAGCTAAGTTTTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR GCA 90 bp CTTCCTTTTCTGCTGCCAGGAGAAAGGAGAGGGGACAGGATAAAGAGAAACACATATATACAGGTACTTTaGCACCATCATTGTTGTGTG +
Preference number: 4 (lower is better)
Translates to: LPFLLPGERRGDRIKRNTYIQVL*HHHCCV
Trigger: CACACAACAATGATGGTGGCAAAGTACCTGTATATA...TGTGTTTCTCTTTATCCTGTCCCCTCTCCTTTCTCCTGGCAGCAGAAAAGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CCA 90 bp GAAAGGGCTATATACAGGTACTTTGCCACCATCATTGTTGTGTGTTTGCTCTTGTTTAGCCCAGACATTTaGTTTCCGGACATCATGGCA +
Preference number: 4 (lower is better)
Translates to: ERAIYRYFATIIVVCLLLFSPDI*FPDIMA
Trigger: TGCCATGATGTCCGGAAACCAAATGTCTGGGCTAAA...CAAGAGCAAACACACAACAATGATGGTGGCAAAGTACCTGTATATAGCCCTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CCA 90 bp TCAGAAAACTTAGCTGTACAGAGAAAACATCAAGGCTTTGGTGGAGATATCAGAACCGCTTTGTTGCTGTaGAAAGGGGAGGAGATTTGG +
Preference number: 4 (lower is better)
Translates to: SENLAVQRKHQGFGGDIRTALLL*KGEEIW
Trigger: CCAAATCTCCTCCCCTTTCCACAGCAACAAAGCGGT...TCTGATATCTCCACCAAAGCCTTGATGTTTTCTCTGTACAGCTAAGTTTTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CCA 90 bp GTGTATTTCAAGAGCATTAGGAGTCTGCACTTGGTTCAATCACAGTTTGGATCTTGTTGGTCTCGATGCTaGTCCGTTTCTTTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: VYFKSIRSLHLVQSQFGSCWSRC*SVSFSS
Trigger: GGAAGAGAAAGAAACGGACCAGCATCGAGACCAACA...AGATCCAAACTGTGATTGAACCAAGTGCAGACTCCTAATGCTCTTGAAATACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
3UTR CAA 72 bp TGGTGGAGATATCAGATTCAAATCTTTTCACAGATTTaGGGATCAGTTCAGGGGTTGTGGCCAAGTTCAGAG +
Preference number: 4 (lower is better)
Translates to: WWRYQIQIFSQI*GSVQGLWPSSE
Trigger: CTCTGAACTTGGCCACAACCCCTGAACTGATCCCAAAATCTGTGAAAAGATTTGAATCTGATATCTCCACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR TCA 90 bp TCAGAAAACTTAGCTGTACAGAGAAAACATCAAGGCTTTGGTGGAGATATCAGACATCCCCACTCATCTTaGTATCTGTGTGCATGGACT +
Preference number: 4 (lower is better)
Translates to: SENLAVQRKHQGFGGDIRHPHSS*YLCAWT
Trigger: AGTCCATGCACACAGATATCAAGATGAGTGGGGATG...TCTGATATCTCCACCAAAGCCTTGATGTTTTCTCTGTACAGCTAAGTTTTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000543440.7
CDS-3UTR GCA 90 bp AAGGCAATCTGTCTGTATATAGAAGGCATGATTCCCTTCCTTCCAGGGGGAATATCTTCGGTTTTAATCTaGCTGTTGAAATCTAGGCCA +
Preference number: 4 (lower is better)
Translates to: KAICLYIEGMIPFLPGGISSVLI*LLKSRP
Trigger: TGGCCTAGATTTCAACAGGCAGATTAAAACCGAAGA...TATTCCCCCTGGAAGGAAGGGAATCATGCCTTCTATATACAGACAGATTGCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CCA 90 bp TCAGAAAACTTAGCTGTACAGAGAAAACATCAAGGCTTTGGTGGAGATATCAGATGTCCTGACATGGGCTaGCATTTAGCCCAGACATTT +
Preference number: 4 (lower is better)
Translates to: SENLAVQRKHQGFGGDIRCPDMG*HLAQTF
Trigger: AAATGTCTGGGCTAAATGCCAGCCCATGTCAGGACA...TCTGATATCTCCACCAAAGCCTTGATGTTTTCTCTGTACAGCTAAGTTTTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CCA 90 bp TTTGGGATCAGTTCAGGGGTTGTGGCCAAGTTCAGAGTCAAAACTATTATCTCCTTAGGAGTCTGCACTTaGTTCAATCACAGTTTGGAT +
Preference number: 4 (lower is better)
Translates to: FGISSGVVAKFRVKTIISLGVCT*FNHSLD
Trigger: ATCCAAACTGTGATTGAACCAAGTGCAGACTCCTAA...GGAGATAATAGTTTTGACTCTGAACTTGGCCACAACCCCTGAACTGATCCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CCA 90 bp GGGTTGTGGCCAAGTTCAGAGTCAAAACTATTATCTCCCCTTCTGGTGTTTGGCAATACAAAAATTAGCTaGGCTAATTTTTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: GLWPSSESKLLSPLLVFGNTKIS*ANFWWW
Trigger: CCACCACCAAAAATTAGCCCAGCTAATTTTTGTATT...GCCAAACACCAGAAGGGGAGATAATAGTTTTGACTCTGAACTTGGCCACAACCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR GCA 90 bp AAGGCAATCTGTCTGTATATAGAAGGCATGATTCCCTTCCTTCCAGGGGGAATATCATTGTTGTGTGTTTaGTCTTGTGTTCTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: KAICLYIEGMIPFLPGGISLLCV*SCVLPF
Trigger: AAAAGGAAGAACACAAGAGCAAACACACAACAATGA...TATTCCCCCTGGAAGGAAGGGAATCATGCCTTCTATATACAGACAGATTGCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CCA 90 bp AAGGCAATCTGTCTGTATATAGAAGGCATGATTCCCTTCCTTCCAGGGGGAATAAAAACATCAAGGCTTTaGTGGAGATATCAGATTCAA +
Preference number: 4 (lower is better)
Translates to: KAICLYIEGMIPFLPGGIKTSRL*WRYQIQ
Trigger: TTGAATCTGATATCTCCACCAAAGCCTTGATGTTTT...TATTCCCCCTGGAAGGAAGGGAATCATGCCTTCTATATACAGACAGATTGCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CCA 90 bp GAAAGGGCTATATACAGGTACTTTGCCACCATCATTGTTGTGTGTTTGCTCTTGAATACAAAAATTAGCTaGGCTAATTTTTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: ERAIYRYFATIIVVCLLLNTKIS*ANFWWW
Trigger: CCACCACCAAAAATTAGCCCAGCTAATTTTTGTATT...CAAGAGCAAACACACAACAATGATGGTGGCAAAGTACCTGTATATAGCCCTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CCA 90 bp TCAGAAAACTTAGCTGTACAGAGAAAACATCAAGGCTTTGGTGGAGATATCAGAACATCAAGGCTTTGGTaGAGATATCAGATTCAAATC +
Preference number: 4 (lower is better)
Translates to: SENLAVQRKHQGFGGDIRTSRLW*RYQIQI
Trigger: GATTTGAATCTGATATCTCCACCAAAGCCTTGATGT...TCTGATATCTCCACCAAAGCCTTGATGTTTTCTCTGTACAGCTAAGTTTTCTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS GCA 90 bp GGTCTCCTTCCTCCAGTTCCCGGCCGCCGCCGCCGCGGGAGCCGCTaGCGGAGCCGTCGCCGCCACTGTCGCGCGCTCCGCTGCTCCGGC +
Preference number: 5 (lower is better)
Translates to: GLLPPVPGRRRRGSR*RSRRRHCRALRCSG
Trigger: GCCGGAGCAGCGGAGCGCGCGACAGTGGCGGCGACGGCTCCGGCAGCGGCTCCCGCGGCGGCGGCGGCCGGGAACTGGAGGAAGGAGACC
80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543440.7
CDS GCA 90 bp GGGAGCCGCTGCCGGAGCCGTCGCCGCCACTGTCGCGCGCTCCGCTaGTCCGGCCCGGGCAACACTCGGCGCCGCCAGGATTGCCACACT +
Preference number: 5 (lower is better)
Translates to: GSRCRSRRRHCRALR*SGPGNTRRRQDCHT
Trigger: AGTGTGGCAATCCTGGCGGCGCCGAGTGTTGCCCGGGCCGGAGCAGCGGAGCGCGCGACAGTGGCGGCGACGGCTCCGGCAGCGGCTCCC
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543440.7
CDS-3UTR CAA 90 bp AGGATCCTGGCAGCCCAGGGTGCCCAAATGCCTGGGATGCCAGTCCCGGCCCAGGAGGAGGAGACCGCTTaGTTGCTGTGGAAAGGGGAG +
Preference number: 5 (lower is better)
Translates to: RILAAQGAQMPGMPVPAQEEETA*LLWKGE
Trigger: CTCCCCTTTCCACAGCAACAAAGCGGTCTCCTCCTC...CTGGGCCGGGACTGGCATCCCAGGCATTTGGGCACCCTGGGCTGCCAGGATCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533620.5
CDS-3UTR CAA 90 bp AGGGTGCCCAAATGCCTGGGATGCCAGTCCCGGCCCAGTCTGTGGGAGGAGGAGGAGGAGACCGCTTTGTaGCTGTGGAAAGGGGAGGAG +
Preference number: 5 (lower is better)
Translates to: RVPKCLGCQSRPSLWEEEEETAL*LWKGEE
Trigger: CTCCTCCCCTTTCCACAGCAACAAAGCGGTCTCCTC...CTCCTCCTCCCACAGACTGGGCCGGGACTGGCATCCCAGGCATTTGGGCACCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533620.5
CDS TCA 90 bp GCTACAACTTTGGCACCACGATCACTGTCCCCACCCCCTGCCACCTaGTCAGGTCCCTCCACCCACCTCAAGTCCCATGGAGAGGCCCTC +
Preference number: 5 (lower is better)
Translates to: ATTLAPRSLSPPPAT*SGPSTHLKSHGEAL
Trigger: GAGGGCCTCTCCATGGGACTTGAGGTGGGTGGAGGGACCTGATCAGGTGGCAGGGGGTGGGGACAGTGATCGTGGTGCCAAAGTTGTAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606153.1
CDS CCA 90 bp CAGTCCCGGCCCAGTCTGTGGGAGGAGGAGACCGCTTTGTTGCTGTaGAAAGGGGAGGAGATTTGGCTGCAGACCTTGCTGCCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: QSRPSLWEEETALLL*KGEEIWLQTLLPRL
Trigger: CAGCCTGGGCAGCAAGGTCTGCAGCCAAATCTCCTCCCCTTTCCACAGCAACAAAGCGGTCTCCTCCTCCCACAGACTGGGCCGGGACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS CCA 90 bp ACCCCCTGCCACCTGATCAGGTCCCTCCACCCACCTCAAGTCCCATaGAGAGGCCCTCCTAGCACTGCCAGGCATTGCCACATACAGGTG +
Preference number: 5 (lower is better)
Translates to: TPCHLIRSLHPPQVP*RGPPSTARHCHIQV
Trigger: CACCTGTATGTGGCAATGCCTGGCAGTGCTAGGAGGGCCTCTCCATGGGACTTGAGGTGGGTGGAGGGACCTGATCAGGTGGCAGGGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000606153.1
CDS GCA 90 bp GATGCCAGTCCCGGCCCAGTCTGTGGGAGGAGGAGACCGCTTTGTTaGTGTGGAAAGGGGAGGAGATTTGGCTGCAGACCTTGCTGCCCA +
Preference number: 5 (lower is better)
Translates to: DASPGPVCGRRRPLC*CGKGRRFGCRPCCP
Trigger: TGGGCAGCAAGGTCTGCAGCCAAATCTCCTCCCCTTTCCACAGCAACAAAGCGGTCTCCTCCTCCCACAGACTGGGCCGGGACTGGCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS GCA 90 bp CTCTCAGAGGAGCAATGCTGGGGCCTGTGCAGGGTTGGAGTTCAGTaGCTGGAGCATGAAGGAGGCTGGCCTGGGAGCTGGAATCTCTGG +
Preference number: 5 (lower is better)
Translates to: LSEEQCWGLCRVGVQ*LEHEGGWPGSWNLW
Trigger: CCAGAGATTCCAGCTCCCAGGCCAGCCTCCTTCATGCTCCAGGCACTGAACTCCAACCCTGCACAGGCCCCAGCATTGCTCCTCTGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606153.1
CDS CCA 90 bp CAGTCCCGGCCCAGTCTGTGGGAGGAGGAGACCGCTTTGTTGCTGTaGAAAGGGGAGGAGATTTGGCTGCAGACCTGGGTGAAAGGGGAG +
Preference number: 5 (lower is better)
Translates to: QSRPSLWEEETALLL*KGEEIWLQTWVKGE
Trigger: CTCCCCTTTCACCCAGGTCTGCAGCCAAATCTCCTCCCCTTTCCACAGCAACAAAGCGGTCTCCTCCTCCCACAGACTGGGCCGGGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606153.1
CDS-3UTR CAA 90 bp AAAGAGGATCCTGGCAGCCCAGGGTGCCCAAATGCCTGGGATGCCAGTCCCGGCGAAAGGGGAGGAGATTaGGCTGCAGACCTAGGTGGT +
Preference number: 5 (lower is better)
Translates to: KEDPGSPGCPNAWDASPGERGGD*AADLGG
Trigger: ACCACCTAGGTCTGCAGCCAAATCTCCTCCCCTTTC...GCCGGGACTGGCATCCCAGGCATTTGGGCACCCTGGGCTGCCAGGATCCTCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533620.5
CDS CCA 90 bp CAGAGGAGCAATGCTGGGGCCTGTGCAGGGTTGGAGTTCAGTGCCTaGAGCATGAAGGAGGCTGGCCTGGGAGCTGGAATCTCTGGATTC +
Preference number: 5 (lower is better)
Translates to: QRSNAGACAGLEFSA*SMKEAGLGAGISGF
Trigger: GAATCCAGAGATTCCAGCTCCCAGGCCAGCCTCCTTCATGCTCCAGGCACTGAACTCCAACCCTGCACAGGCCCCAGCATTGCTCCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606153.1
CDS TCA 90 bp GAGCACCTAGGTAGGGTTCGTGGCCATCTTGGTATGCCTGAGAAGTaGGCTGAGCCTGGCTCTCAGAGGAGCAATGCTGGGGCCTGTGCA +
Preference number: 5 (lower is better)
Translates to: EHLGRVRGHLGMPEK*AEPGSQRSNAGACA
Trigger: TGCACAGGCCCCAGCATTGCTCCTCTGAGAGCCAGGCTCAGCTCACTTCTCAGGCATACCAAGATGGCCACGAACCCTACCTAGGTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606153.1
CDS GCA 90 bp CACATGTGCTACAACTTTGGCACCACGATCACTGTCCCCACCCCCTaGCACCTGATCAGGTCCCTCCACCCACCTCAAGTCCCATGGAGA +
Preference number: 5 (lower is better)
Translates to: HMCYNFGTTITVPTP*HLIRSLHPPQVPWR
Trigger: TCTCCATGGGACTTGAGGTGGGTGGAGGGACCTGATCAGGTGGCAGGGGGTGGGGACAGTGATCGTGGTGCCAAAGTTGTAGCACATGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606153.1
CDS CCA 90 bp CATGAGGGACTCTGCCTGGTTGGTGGCTCACTCTCCCAGCAGGAGTaGGGCCATCAAACCACCAAAGCAGACAATGGGGTTGGTCATCCC +
Preference number: 5 (lower is better)
Translates to: HEGLCLVGGSLSQQE*GHQTTKADNGVGHP
Trigger: GGGATGACCAACCCCATTGTCTGCTTTGGTGGTTTGATGGCCCCACTCCTGCTGGGAGAGTGAGCCACCAACCAGGCAGAGTCCCTCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606153.1
CDS-3UTR CAA 90 bp GTATATAGAAGGCATGATTCCCTTCCTTCCAGGGGGAATACAGGGCCAGCTGGAGGGCACCAGCAGGCGTaGCAACATGCCCAGGGCACC +
Preference number: 5 (lower is better)
Translates to: VYRRHDSLPSRGNTGPAGGHQQA*QHAQGT
Trigger: GGTGCCCTGGGCATGTTGCAACGCCTGCTGGTGCCC...TCCAGCTGGCCCTGTATTCCCCCTGGAAGGAAGGGAATCATGCCTTCTATATAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CAA 90 bp AGTTATTTTGAGATGCAGTGGGGCTGCTGGCGTGGAGTCCTGAGCCAGGAGATGCGCTCTCCAGTCTTCTaGCTGCCCAGGCTGGGTCTG +
Preference number: 5 (lower is better)
Translates to: SYFEMQWGCWRGVLSQEMRSPVF*LPRLGL
Trigger: CAGACCCAGCCTGGGCAGCAAGAAGACTGGAGAGCG...CATCTCCTGGCTCAGGACTCCACGCCAGCAGCCCCACTGCATCTCAAAATAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533620.5
CDS TCA 90 bp GCATTTAGCCCAGACATTTGGTTTCCGGACATCATGGCAGGTCCTTaGCTCAGGTGGCATGGCCGATGGGAGAGGGTCTGCTGCAGGGAG +
Preference number: 5 (lower is better)
Translates to: AFSPDIWFPDIMAGP*LRWHGRWERVCCRE
Trigger: CTCCCTGCAGCAGACCCTCTCCCATCGGCCATGCCACCTGAGTCAAGGACCTGCCATGATGTCCGGAAACCAAATGTCTGGGCTAAATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260264.8
ENST00000533620.5
ENST00000543440.7
CDS GCA 90 bp GGGGCACCCAGATCAGGGGAGGAATGGCAGCTAAGATACAGCTCATaGTGCTGTCGCCAATCTGTCCACCTTGGCATGAGACTGCACCTG +
Preference number: 5 (lower is better)
Translates to: GAPRSGEEWQLRYSS*CCRQSVHLGMRLHL
Trigger: CAGGTGCAGTCTCATGCCAAGGTGGACAGATTGGCGACAGCAGCATGAGCTGTATCTTAGCTGCCATTCCTCCCCTGATCTGGGTGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606153.1
CDS-3UTR CAA 90 bp AGTCCTGAGCCAGGAGATGAAGGCCTGCTGTTGTTCCCAGGGGAACAGGATGACAGAGTCAGGCGGATGTaGGTCTCGATGCTGGTCCGT +
Preference number: 5 (lower is better)
Translates to: SPEPGDEGLLLFPGEQDDRVRRM*VSMLVR
Trigger: ACGGACCAGCATCGAGACCAACATCCGCCTGACTCT...GTCATCCTGTTCCCCTGGGAACAACAGCAGGCCTTCATCTCCTGGCTCAGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533620.5
CDS-3UTR CAA 90 bp AGGGTGCCCAAATGCCTGGGATGCCAGTCCCGGCCCAGTCTGTGGGAGGAGGAGGGGTTTTGGGTTATCTaGAAACCTCTTCTCCAGAGT +
Preference number: 5 (lower is better)
Translates to: RVPKCLGCQSRPSLWEEEGFWVI*KPLLQS
Trigger: ACTCTGGAGAAGAGGTTTCAAGATAACCCAAAACCC...CTCCTCCTCCCACAGACTGGGCCGGGACTGGCATCCCAGGCATTTGGGCACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533620.5
CDS-3UTR CAA 90 bp GCCTGGGATGCCAGTCCCGGCCCAGTCTGTGGGAGGAGGAGACCGCTTTGTTGCAGTAGGAGAAACTTTTaGGTCTCAGTGGAGGTAGGT +
Preference number: 5 (lower is better)
Translates to: AWDASPGPVCGRRRPLCCSRRNF*VSVEVG
Trigger: ACCTACCTCCACTGAGACCAAAAAGTTTCTCCTACT...GCAACAAAGCGGTCTCCTCCTCCCACAGACTGGGCCGGGACTGGCATCCCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533620.5
CDS CCA 90 bp CATTTGGTTTCCGGACATCATGGCAGGTCCTTGACTCAGGTGGCATaGCCGATGGGAGAGGGTCTGCTGCAGGGAGTCACTGAGATCTTC +
Preference number: 5 (lower is better)
Translates to: HLVSGHHGRSLTQVA*PMGEGLLQGVTEIF
Trigger: GAAGATCTCAGTGACTCCCTGCAGCAGACCCTCTCCCATCGGCCATGCCACCTGAGTCAAGGACCTGCCATGATGTCCGGAAACCAAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260264.8
ENST00000533620.5
ENST00000543440.7
CDS CCA 90 bp GACATGGGCTGGCATTTAGCCCAGACATTTGGTTTCCGGACATCATaGCAGGTCCTTGACTCAGGTGGCATGGCCGATGGGAGAGGGTCT +
Preference number: 5 (lower is better)
Translates to: DMGWHLAQTFGFRTS*QVLDSGGMADGRGS
Trigger: AGACCCTCTCCCATCGGCCATGCCACCTGAGTCAAGGACCTGCCATGATGTCCGGAAACCAAATGTCTGGGCTAAATGCCAGCCCATGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260264.8
ENST00000533620.5
ENST00000543440.7
CDS CCA 90 bp AAGAATGGGGTTGTTTACCTGGGATGCCAGTCCCGGCCCAGTCTGTaGGAGGAGGAGACCGCTTTGTTGCTGTGGAAAGGGGAGGAGATT +
Preference number: 5 (lower is better)
Translates to: KNGVVYLGCQSRPSL*EEETALLLWKGEEI
Trigger: AATCTCCTCCCCTTTCCACAGCAACAAAGCGGTCTCCTCCTCCCACAGACTGGGCCGGGACTGGCATCCCAGGTAAACAACCCCATTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606153.1
CDS CCA 90 bp GCTGAGACATTCCTAGAGGAAACAGGAAGAATGGGGTTGTTTACCTaGGATGCCAGTCCCGGCCCAGTCTGTGGGAGGAGGAGACCGCTT +
Preference number: 5 (lower is better)
Translates to: AETFLEETGRMGLFT*DASPGPVCGRRRPL
Trigger: AAGCGGTCTCCTCCTCCCACAGACTGGGCCGGGACTGGCATCCCAGGTAAACAACCCCATTCTTCCTGTTTCCTCTAGGAATGTCTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606153.1
CDS-3UTR CAA 90 bp CTTCCTTTTCTGCTGCCAGGAGAAAGGAGAGGGGACAGGATAAAGAGAAACACAGGGCACCAGCAGGCGTaGCAACATGCCCAGGGCACC +
Preference number: 5 (lower is better)
Translates to: LPFLLPGERRGDRIKRNTGHQQA*QHAQGT
Trigger: GGTGCCCTGGGCATGTTGCAACGCCTGCTGGTGCCC...TGTGTTTCTCTTTATCCTGTCCCCTCTCCTTTCTCCTGGCAGCAGAAAAGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CAA 90 bp CCCCAGCCAAATGGCTGTCCCCAGAAGCCCACGGATGAGTTGGAGAATAACAGCAGGCAGGAGAATCGCTaGAACCCAAGTGGCAGAGCA +
Preference number: 5 (lower is better)
Translates to: PQPNGCPQKPTDELENNSRQENR*NPSGRA
Trigger: TGCTCTGCCACTTGGGTTCAAGCGATTCTCCTGCCT...GCTGTTATTCTCCAACTCATCCGTGGGCTTCTGGGGACAGCCATTTGGCTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS GCA 90 bp GACATTCCTAGAGGAAACAGGAAGAATGGGGTTGTTTACCTGGGATaGCAGTCCCGGCCCAGTCTGTGGGAGGAGGAGACCGCTTTGTTG +
Preference number: 5 (lower is better)
Translates to: DIPRGNRKNGVVYLG*QSRPSLWEEETALL
Trigger: CAACAAAGCGGTCTCCTCCTCCCACAGACTGGGCCGGGACTGGCATCCCAGGTAAACAACCCCATTCTTCCTGTTTCCTCTAGGAATGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606153.1
CDS CCA 90 bp CGACCATACGGCTCTAAAGGGCAGTGGGCCTTAGCCAGAGGCATGTaGCTGACCAGGACATTTTATACTTGGGAGAGAGGGCTGAGAGAG +
Preference number: 5 (lower is better)
Translates to: RPYGSKGQWALARGM*LTRTFYTWERGLRE
Trigger: CTCTCTCAGCCCTCTCTCCCAAGTATAAAATGTCCTGGTCAGCCACATGCCTCTGGCTAAGGCCCACTGCCCTTTAGAGCCGTATGGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606153.1
CDS-3UTR CAA 90 bp CACAGTTTGGATCTCCGGAGGCCCTTGCTCTTGAAGAAGACAAGAGTCTGGGTTATTTGGCTGCAGACCTaGCTGCCCAGGCTGGGTCTG +
Preference number: 5 (lower is better)
Translates to: HSLDLRRPLLLKKTRVWVIWLQT*LPRLGL
Trigger: CAGACCCAGCCTGGGCAGCAAGGTCTGCAGCCAAAT...AACCCAGACTCTTGTCTTCTTCAAGAGCAAGGGCCTCCGGAGATCCAAACTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CAA 90 bp GTATATAGAAGGCATGATTCCCTTCCTTCCAGGGGGAATACAGGGCCAGCTGGAATTTGGCTGCAGACCTaGCTGCCCAGGCTGGGTCTG +
Preference number: 5 (lower is better)
Translates to: VYRRHDSLPSRGNTGPAGIWLQT*LPRLGL
Trigger: CAGACCCAGCCTGGGCAGCAAGGTCTGCAGCCAAAT...TCCAGCTGGCCCTGTATTCCCCCTGGAAGGAAGGGAATCATGCCTTCTATATAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CAA 90 bp GATAATGTTCCCAAAGAAGTCAACAAAGATTCCCAGCCCAGGCCAGGCGCGGTGGAAAGGGGAGGAGATTaGGCTGCAGACCTTGCTGCC +
Preference number: 5 (lower is better)
Translates to: DNVPKEVNKDSQPRPGAVERGGD*AADLAA
Trigger: GGCAGCAAGGTCTGCAGCCAAATCTCCTCCCCTTTC...CACCGCGCCTGGCCTGGGCTGGGAATCTTTGTTGACTTCTTTGGGAACATTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CAA 90 bp AGATACCAGCCGGGAGTTGTAGACAGGTGGTTTGATGGGTGTGGCCACAGGGCACTCTGCTTGAAGGTCTaGGCAAACTTCTCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: RYQPGVVDRWFDGCGHRALCLKV*ANFSSS
Trigger: GGAGCTGGAGAAGTTTGCCAAGACCTTCAAGCAGAG...TGCCCTGTGGCCACACCCATCAAACCACCTGTCTACAACTCCCGGCTGGTATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533620.5
CDS-3UTR CAA 90 bp GTATATAGAAGGCATGATTCCCTTCCTTCCAGGGGGAATACAGGGCCAGCTGGACTCCCCTTCTGGTGTTaGGCACCCCAGCCAAATGGC +
Preference number: 5 (lower is better)
Translates to: VYRRHDSLPSRGNTGPAGLPFWC*APQPNG
Trigger: GCCATTTGGCTGGGGTGCCAAACACCAGAAGGGGAG...TCCAGCTGGCCCTGTATTCCCCCTGGAAGGAAGGGAATCATGCCTTCTATATAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CAA 90 bp GGTGGGGTTCTAAAGAGGATCCTGGCAGCCCAGGGTGCCCAAATGCCTGGGATGACATCCCCACTCATCTaGATATCTGTGTGCATGGAC +
Preference number: 5 (lower is better)
Translates to: GGVLKRILAAQGAQMPGMTSPLI*ISVCMD
Trigger: GTCCATGCACACAGATATCAAGATGAGTGGGGATGT...CATCCCAGGCATTTGGGCACCCTGGGCTGCCAGGATCCTCTTTAGAACCCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533620.5
CDS TCA 90 bp ATCCTGCATGGTCCTAGCATCGATCACACAGCCAGCCTGAATCTTTaGGTGCTCACCCATGCTCGGCTCCTTTCCAAGTCTCCTCCCTCT +
Preference number: 5 (lower is better)
Translates to: ILHGPSIDHTASLNL*VLTHARLLSKSPPS
Trigger: AGAGGGAGGAGACTTGGAAAGGAGCCGAGCATGGGTGAGCACTCAAAGATTCAGGCTGGCTGTGTGATCGATGCTAGGACCATGCAGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532638.1
CDS TCA 90 bp TTGCCCACATCCTGCATGGTCCTAGCATCGATCACACAGCCAGCCTaGATCTTTGAGTGCTCACCCATGCTCGGCTCCTTTCCAAGTCTC +
Preference number: 5 (lower is better)
Translates to: LPTSCMVLASITQPA*IFECSPMLGSFPSL
Trigger: GAGACTTGGAAAGGAGCCGAGCATGGGTGAGCACTCAAAGATTCAGGCTGGCTGTGTGATCGATGCTAGGACCATGCAGGATGTGGGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532638.1
CDS CCA 90 bp ACTCTCCCAGCAGGAGTGGGGCCATCAAACCACCAAAGCAGACAATaGGGTTGGTCATCCCAATCGCTTGTCACTCAACAGCACTTTGGG +
Preference number: 5 (lower is better)
Translates to: TLPAGVGPSNHQSRQ*GWSSQSLVTQQHFG
Trigger: CCCAAAGTGCTGTTGAGTGACAAGCGATTGGGATGACCAACCCCATTGTCTGCTTTGGTGGTTTGATGGCCCCACTCCTGCTGGGAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606153.1
CDS CCA 90 bp GGGCTGAGGATTTTGGCTTTCCCTGCAGGAGAAGTAGCTGGGTTATaGCTACAGAGGCCCAATCAAATCTGCGAGGATGCCAGACCAAGC +
Preference number: 5 (lower is better)
Translates to: GLRILAFPAGEVAGL*LQRPNQICEDARPS
Trigger: GCTTGGTCTGGCATCCTCGCAGATTTGATTGGGCCTCTGTAGCCATAACCCAGCTACTTCTCCTGCAGGGAAAGCCAAAATCCTCAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606153.1
CDS-3UTR CAA 90 bp GTATATAGAAGGCATGATTCCCTTCCTTCCAGGGGGAATACAGGGCCAGCTGGAGAAAGGGGAGGAGATTaGGCTGCAGACCTTGCTGCC +
Preference number: 5 (lower is better)
Translates to: VYRRHDSLPSRGNTGPAGERGGD*AADLAA
Trigger: GGCAGCAAGGTCTGCAGCCAAATCTCCTCCCCTTTC...TCCAGCTGGCCCTGTATTCCCCCTGGAAGGAAGGGAATCATGCCTTCTATATAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CAA 90 bp GTATATAGAAGGCATGATTCCCTTCCTTCCAGGGGGAATACAGGGCCAGCTGGAGAGGAGACCGCTTTGTaGCTGTGGAAAGGGGAGGAG +
Preference number: 5 (lower is better)
Translates to: VYRRHDSLPSRGNTGPAGEETAL*LWKGEE
Trigger: CTCCTCCCCTTTCCACAGCAACAAAGCGGTCTCCTC...TCCAGCTGGCCCTGTATTCCCCCTGGAAGGAAGGGAATCATGCCTTCTATATAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CAA 90 bp GTATATAGAAGGCATGATTCCCTTCCTTCCAGGGGGAATACAGGGCCAGCTGGAGAGGAGGAGACCGCTTaGTTGCTGTGGAAAGGGGAG +
Preference number: 5 (lower is better)
Translates to: VYRRHDSLPSRGNTGPAGEEETA*LLWKGE
Trigger: CTCCCCTTTCCACAGCAACAAAGCGGTCTCCTCCTC...TCCAGCTGGCCCTGTATTCCCCCTGGAAGGAAGGGAATCATGCCTTCTATATAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CAA 90 bp CCCCAGCCAAATGGCTGTCCCCAGAAGCCCACGGATGAGTTGGAGAATAACAGCCCTCCGAGCTGGGTTTaGGGTTATCTTGAAACCTCT +
Preference number: 5 (lower is better)
Translates to: PQPNGCPQKPTDELENNSPPSWV*GYLETS
Trigger: AGAGGTTTCAAGATAACCCAAAACCCAGCTCGGAGG...GCTGTTATTCTCCAACTCATCCGTGGGCTTCTGGGGACAGCCATTTGGCTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS GCA 90 bp AGTAGCTGGGTTATGGCTACAGAGGCCCAATCAAATCTGCGAGGATaGCAGACCAAGCAGATACGACCATACGGCTCTAAAGGGCAGTGG +
Preference number: 5 (lower is better)
Translates to: SSWVMATEAQSNLRG*QTKQIRPYGSKGQW
Trigger: CCACTGCCCTTTAGAGCCGTATGGTCGTATCTGCTTGGTCTGGCATCCTCGCAGATTTGATTGGGCCTCTGTAGCCATAACCCAGCTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606153.1
CDS CCA 90 bp GGATGCCAGACCAAGCAGATACGACCATACGGCTCTAAAGGGCAGTaGGCCTTAGCCAGAGGCATGTGGCTGACCAGGACATTTTATACT +
Preference number: 5 (lower is better)
Translates to: GCQTKQIRPYGSKGQ*ALARGMWLTRTFYT
Trigger: AGTATAAAATGTCCTGGTCAGCCACATGCCTCTGGCTAAGGCCCACTGCCCTTTAGAGCCGTATGGTCGTATCTGCTTGGTCTGGCATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606153.1
CDS-3UTR CAA 90 bp GGGTTGTGGCCAAGTTCAGAGTCAAAACTATTATCTCCCCTTCTGGTGTTTGGCCATCATGGCAGGTCCTaGACTCAGGTGGCATGGCCG +
Preference number: 5 (lower is better)
Translates to: GLWPSSESKLLSPLLVFGHHGRS*TQVAWP
Trigger: CGGCCATGCCACCTGAGTCAAGGACCTGCCATGATG...GCCAAACACCAGAAGGGGAGATAATAGTTTTGACTCTGAACTTGGCCACAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CAA 90 bp GGTGGTTTGATGGGTGTGGCCACAGGGCAGTTGATTCGCTTCTCCTTTTGGCGTCCTCCGAGCTGGGTTTaGGGTTATCTTGAAACCTCT +
Preference number: 5 (lower is better)
Translates to: GGLMGVATGQLIRFSFWRPPSWV*GYLETS
Trigger: AGAGGTTTCAAGATAACCCAAAACCCAGCTCGGAGG...ACGCCAAAAGGAGAAGCGAATCAACTGCCCTGTGGCCACACCCATCAAACCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533620.5
CDS GCA 90 bp GCAGGAGAAGTAGCTGGGTTATGGCTACAGAGGCCCAATCAAATCTaGGAGGATGCCAGACCAAGCAGATACGACCATACGGCTCTAAAG +
Preference number: 5 (lower is better)
Translates to: AGEVAGLWLQRPNQI*EDARPSRYDHTALK
Trigger: CTTTAGAGCCGTATGGTCGTATCTGCTTGGTCTGGCATCCTCGCAGATTTGATTGGGCCTCTGTAGCCATAACCCAGCTACTTCTCCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606153.1
CDS GCA 90 bp AACCATTCTGCCCAACCATCTGTGCAGAGCCATCTCATGCAGCTGTaGAGGTTATTAACTGTACAGGGGCACCCAGATCAGGGGAGGAAT +
Preference number: 5 (lower is better)
Translates to: NHSAQPSVQSHLMQL*RLLTVQGHPDQGRN
Trigger: ATTCCTCCCCTGATCTGGGTGCCCCTGTACAGTTAATAACCTGCACAGCTGCATGAGATGGCTCTGCACAGATGGTTGGGCAGAATGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606153.1
CDS-3UTR CAA 90 bp CACAGTTTGGATCTCCGGAGGCCCTTGCTCTTGAAGAAGACAAGAGTCTGGGTTCTCTGCTTGAAGGTCTaGGCAAACTTCTCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: HSLDLRRPLLLKKTRVWVLCLKV*ANFSSS
Trigger: GGAGCTGGAGAAGTTTGCCAAGACCTTCAAGCAGAG...AACCCAGACTCTTGTCTTCTTCAAGAGCAAGGGCCTCCGGAGATCCAAACTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS CCA 90 bp CATGGAGAGGCCCTCCTAGCACTGCCAGGCATTGCCACATACAGGTaGAGGCAAATCAGATACAGGGATAAACAGACATGTAAACAGCAG +
Preference number: 5 (lower is better)
Translates to: HGEALLALPGIATYR*RQIRYRDKQTCKQQ
Trigger: CTGCTGTTTACATGTCTGTTTATCCCTGTATCTGATTTGCCTCCACCTGTATGTGGCAATGCCTGGCAGTGCTAGGAGGGCCTCTCCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606153.1
CDS-3UTR CAA 90 bp TGGTTCAATCACAGTTTGGATCTCCGGAGGCCCTTGCTCTTGAAGAAGACAAGAGTGGCCACAGGGCAGTaGATTCGCTTCTCCTTTTGG +
Preference number: 5 (lower is better)
Translates to: WFNHSLDLRRPLLLKKTRVATGQ*IRFSFW
Trigger: CCAAAAGGAGAAGCGAATCAACTGCCCTGTGGCCAC...TCTTGTCTTCTTCAAGAGCAAGGGCCTCCGGAGATCCAAACTGTGATTGAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CAA 90 bp CCCCAGCCAAATGGCTGTCCCCAGAAGCCCACGGATGAGTTGGAGAATAACAGCACTTTGCCACCATCATaGTTGTGTGTTTGCTCTTGT +
Preference number: 5 (lower is better)
Translates to: PQPNGCPQKPTDELENNSTLPPS*LCVCSC
Trigger: ACAAGAGCAAACACACAACAATGATGGTGGCAAAGT...GCTGTTATTCTCCAACTCATCCGTGGGCTTCTGGGGACAGCCATTTGGCTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CAA 90 bp GGGTTGTGGCCAAGTTCAGAGTCAAAACTATTATCTCCCCTTCTGGTGTTTGGCAGGCAGGAGAATCGCTaGAACCCAAGTGGCAGAGCA +
Preference number: 5 (lower is better)
Translates to: GLWPSSESKLLSPLLVFGRQENR*NPSGRA
Trigger: TGCTCTGCCACTTGGGTTCAAGCGATTCTCCTGCCT...GCCAAACACCAGAAGGGGAGATAATAGTTTTGACTCTGAACTTGGCCACAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS CCA 90 bp GTCTGGAGAGGCGTAGAGGCTAAGGAGGGTCAAGACGATCTACTCTaGGATCTGATTACCAGAGCTGAAGAAAACCAAGAAGGGAAAGGA +
Preference number: 5 (lower is better)
Translates to: VWRGVEAKEGQDDLL*DLITRAEENQEGKG
Trigger: TCCTTTCCCTTCTTGGTTTTCTTCAGCTCTGGTAATCAGATCCCAGAGTAGATCGTCTTGACCCTCCTTAGCCTCTACGCCTCTCCAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606153.1
CDS CCA 90 bp AATGAATCCGATCTTAAGGACATCTATCATTCCACAAGGATAGAGTaGAATCTGGGCCTAGGGGTCCAGGCACTGTGGCCAGCTAGCTCA +
Preference number: 5 (lower is better)
Translates to: NESDLKDIYHSTRIE*NLGLGVQALWPASS
Trigger: TGAGCTAGCTGGCCACAGTGCCTGGACCCCTAGGCCCAGATTCCACTCTATCCTTGTGGAATGATAGATGTCCTTAAGATCGGATTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606153.1
CDS-3UTR CAA 90 bp ATTGCCACAGTGAAGCTGGCTAAAATATTTGGAACTAGAAGGCAAGGGCATAGGAGAGTCAGGCGGATGTaGGTCTCGATGCTGGTCCGT +
Preference number: 5 (lower is better)
Translates to: IATVKLAKIFGTRRQGHRRVRRM*VSMLVR
Trigger: ACGGACCAGCATCGAGACCAACATCCGCCTGACTCT...CCTATGCCCTTGCCTTCTAGTTCCAAATATTTTAGCCAGCTTCACTGTGGCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CAA 90 bp TTGGTCTCGATGCTGGTCCGTTTCTTTCTCTTCCTACCAAATACTTCACTGAGGGTGGCCACAGGGCAGTaGATTCGCTTCTCCTTTTGG +
Preference number: 5 (lower is better)
Translates to: LVSMLVRFFLFLPNTSLRVATGQ*IRFSFW
Trigger: CCAAAAGGAGAAGCGAATCAACTGCCCTGTGGCCAC...CCTCAGTGAAGTATTTGGTAGGAAGAGAAAGAAACGGACCAGCATCGAGACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533620.5
CDS-3UTR CAA 90 bp GGTGGTTTGATGGGTGTGGCCACAGGGCAGTTGATTCGCTTCTCCTTTTGGCGTGTTTTAATCTGCCTGTaGAAATCTAGGCCATTTCGA +
Preference number: 5 (lower is better)
Translates to: GGLMGVATGQLIRFSFWRVLICL*KSRPFR
Trigger: TCGAAATGGCCTAGATTTCAACAGGCAGATTAAAAC...ACGCCAAAAGGAGAAGCGAATCAACTGCCCTGTGGCCACACCCATCAAACCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533620.5
CDS-3UTR CAA 90 bp ATTGCCACAGTGAAGCTGGCTAAAATATTTGGAACTAGAAGGCAAGGGCATAGGGTGGCCACAGGGCAGTaGATTCGCTTCTCCTTTTGG +
Preference number: 5 (lower is better)
Translates to: IATVKLAKIFGTRRQGHRVATGQ*IRFSFW
Trigger: CCAAAAGGAGAAGCGAATCAACTGCCCTGTGGCCAC...CCTATGCCCTTGCCTTCTAGTTCCAAATATTTTAGCCAGCTTCACTGTGGCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CAA 90 bp CACAGTTTGGATCTCCGGAGGCCCTTGCTCTTGAAGAAGACAAGAGTCTGGGTTAGCTGGCTAAAATATTaGGAACTAGAAGGCAAGGGC +
Preference number: 5 (lower is better)
Translates to: HSLDLRRPLLLKKTRVWVSWLKY*ELEGKG
Trigger: GCCCTTGCCTTCTAGTTCCAAATATTTTAGCCAGCT...AACCCAGACTCTTGTCTTCTTCAAGAGCAAGGGCCTCCGGAGATCCAAACTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CAA 90 bp GTGTATTTCAAGAGCATTAGGAGTCTGCACTTGGTTCAATCACAGTTTGGATCTGAGGAGACCGCTTTGTaGCTGTGGAAAGGGGAGGAG +
Preference number: 5 (lower is better)
Translates to: VYFKSIRSLHLVQSQFGSEETAL*LWKGEE
Trigger: CTCCTCCCCTTTCCACAGCAACAAAGCGGTCTCCTC...AGATCCAAACTGTGATTGAACCAAGTGCAGACTCCTAATGCTCTTGAAATACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CAA 90 bp GTGTATTTCAAGAGCATTAGGAGTCTGCACTTGGTTCAATCACAGTTTGGATCTAGAGTCAGGCGGATGTaGGTCTCGATGCTGGTCCGT +
Preference number: 5 (lower is better)
Translates to: VYFKSIRSLHLVQSQFGSRVRRM*VSMLVR
Trigger: ACGGACCAGCATCGAGACCAACATCCGCCTGACTCT...AGATCCAAACTGTGATTGAACCAAGTGCAGACTCCTAATGCTCTTGAAATACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CAA 90 bp AAGGCAATCTGTCTGTATATAGAAGGCATGATTCCCTTCCTTCCAGGGGGAATAGATCTCCGGAGGCCCTaGCTCTTGAAGAAGACAAGA +
Preference number: 5 (lower is better)
Translates to: KAICLYIEGMIPFLPGGIDLRRP*LLKKTR
Trigger: TCTTGTCTTCTTCAAGAGCAAGGGCCTCCGGAGATC...TATTCCCCCTGGAAGGAAGGGAATCATGCCTTCTATATACAGACAGATTGCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CAA 90 bp TCAGAAAACTTAGCTGTACAGAGAAAACATCAAGGCTTTGGTGGAGATATCAGACTCCCCTTCTGGTGTTaGGCACCCCAGCCAAATGGC +
Preference number: 5 (lower is better)
Translates to: SENLAVQRKHQGFGGDIRLPFWC*APQPNG
Trigger: GCCATTTGGCTGGGGTGCCAAACACCAGAAGGGGAG...TCTGATATCTCCACCAAAGCCTTGATGTTTTCTCTGTACAGCTAAGTTTTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CAA 90 bp AAGGCAATCTGTCTGTATATAGAAGGCATGATTCCCTTCCTTCCAGGGGGAATAGGATCAGTTCAGGGGTaGTGGCCAAGTTCAGAGTCA +
Preference number: 5 (lower is better)
Translates to: KAICLYIEGMIPFLPGGIGSVQG*WPSSES
Trigger: TGACTCTGAACTTGGCCACAACCCCTGAACTGATCC...TATTCCCCCTGGAAGGAAGGGAATCATGCCTTCTATATACAGACAGATTGCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CAA 90 bp GTATATAGAAGGCATGATTCCCTTCCTTCCAGGGGGAATACAGGGCCAGCTGGAACTTTGCCACCATCATaGTTGTGTGTTTGCTCTTGT +
Preference number: 5 (lower is better)
Translates to: VYRRHDSLPSRGNTGPAGTLPPS*LCVCSC
Trigger: ACAAGAGCAAACACACAACAATGATGGTGGCAAAGT...TCCAGCTGGCCCTGTATTCCCCCTGGAAGGAAGGGAATCATGCCTTCTATATAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CAA 90 bp GGGTTGTGGCCAAGTTCAGAGTCAAAACTATTATCTCCCCTTCTGGTGTTTGGCGGGTTTTGGGTTATCTaGAAACCTCTTCTCCAGAGT +
Preference number: 5 (lower is better)
Translates to: GLWPSSESKLLSPLLVFGGFWVI*KPLLQS
Trigger: ACTCTGGAGAAGAGGTTTCAAGATAACCCAAAACCC...GCCAAACACCAGAAGGGGAGATAATAGTTTTGACTCTGAACTTGGCCACAACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CAA 90 bp GGGCTGTGTATTTCAAGAGCATTAGGAGTCTGCACTTGGTTCAATCACAGTTTGCCTCCGAGCTGGGTTTaGGGTTATCTTGAAACCTCT +
Preference number: 5 (lower is better)
Translates to: GLCISRALGVCTWFNHSLPPSWV*GYLETS
Trigger: AGAGGTTTCAAGATAACCCAAAACCCAGCTCGGAGG...CAAACTGTGATTGAACCAAGTGCAGACTCCTAATGCTCTTGAAATACACAGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CAA 90 bp TTGGTCTCGATGCTGGTCCGTTTCTTTCTCTTCCTACCAAATACTTCACTGAGGTGCTTTGGAGTTATTTaGAGATGCAGTGGGGCTGCT +
Preference number: 5 (lower is better)
Translates to: LVSMLVRFFLFLPNTSLRCFGVI*RCSGAA
Trigger: AGCAGCCCCACTGCATCTCAAAATAACTCCAAAGCA...CCTCAGTGAAGTATTTGGTAGGAAGAGAAAGAAACGGACCAGCATCGAGACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533620.5
CDS-3UTR CAA 90 bp CACAGTTTGGATCTCCGGAGGCCCTTGCTCTTGAAGAAGACAAGAGTCTGGGTTAAGAGTCTGGGTTCATaGATAGTGGAGATTTTCTTC +
Preference number: 5 (lower is better)
Translates to: HSLDLRRPLLLKKTRVWVKSLGS*IVEIFF
Trigger: GAAGAAAATCTCCACTATCAATGAACCCAGACTCTT...AACCCAGACTCTTGTCTTCTTCAAGAGCAAGGGCCTCCGGAGATCCAAACTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CAA 90 bp GTGTATTTCAAGAGCATTAGGAGTCTGCACTTGGTTCAATCACAGTTTGGATCTCGGAGGCCCTTGCTCTaGAAGAAGACAAGAGTCTGG +
Preference number: 5 (lower is better)
Translates to: VYFKSIRSLHLVQSQFGSRRPLL*KKTRVW
Trigger: CCAGACTCTTGTCTTCTTCAAGAGCAAGGGCCTCCG...AGATCCAAACTGTGATTGAACCAAGTGCAGACTCCTAATGCTCTTGAAATACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CAA 90 bp GAAAGGGCTATATACAGGTACTTTGCCACCATCATTGTTGTGTGTTTGCTCTTGGATCTCCGGAGGCCCTaGCTCTTGAAGAAGACAAGA +
Preference number: 5 (lower is better)
Translates to: ERAIYRYFATIIVVCLLLDLRRP*LLKKTR
Trigger: TCTTGTCTTCTTCAAGAGCAAGGGCCTCCGGAGATC...CAAGAGCAAACACACAACAATGATGGTGGCAAAGTACCTGTATATAGCCCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CAA 90 bp CTTCCTTTTCTGCTGCCAGGAGAAAGGAGAGGGGACAGGATAAAGAGAAACACAAGCTGGCTAAAATATTaGGAACTAGAAGGCAAGGGC +
Preference number: 5 (lower is better)
Translates to: LPFLLPGERRGDRIKRNTSWLKY*ELEGKG
Trigger: GCCCTTGCCTTCTAGTTCCAAATATTTTAGCCAGCT...TGTGTTTCTCTTTATCCTGTCCCCTCTCCTTTCTCCTGGCAGCAGAAAAGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CAA 90 bp GATAATGTTCCCAAAGAAGTCAACAAAGATTCCCAGCCCAGGCCAGGCGCGGTGATCATTGTTGTGTGTTaGCTCTTGTGTTCTTCCTTT +
Preference number: 5 (lower is better)
Translates to: DNVPKEVNKDSQPRPGAVIIVVC*LLCSSF
Trigger: AAAGGAAGAACACAAGAGCAAACACACAACAATGAT...CACCGCGCCTGGCCTGGGCTGGGAATCTTTGTTGACTTCTTTGGGAACATTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CAA 90 bp CTTCCTTTTCTGCTGCCAGGAGAAAGGAGAGGGGACAGGATAAAGAGAAACACATTGCCACCATCATTGTaGTGTGTTTGCTCTTGTGTT +
Preference number: 5 (lower is better)
Translates to: LPFLLPGERRGDRIKRNTLPPSL*CVCSCV
Trigger: AACACAAGAGCAAACACACAACAATGATGGTGGCAA...TGTGTTTCTCTTTATCCTGTCCCCTCTCCTTTCTCCTGGCAGCAGAAAAGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CAA 90 bp GTATATAGAAGGCATGATTCCCTTCCTTCCAGGGGGAATACAGGGCCAGCTGGAAACAGTGAGATTCCTTaGAATCTCAACAGTTTCCTA +
Preference number: 5 (lower is better)
Translates to: VYRRHDSLPSRGNTGPAGNSEIP*NLNSFL
Trigger: TAGGAAACTGTTGAGATTCAAAGGAATCTCACTGTT...TCCAGCTGGCCCTGTATTCCCCCTGGAAGGAAGGGAATCATGCCTTCTATATAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CAA 90 bp GGGCTGTGTATTTCAAGAGCATTAGGAGTCTGCACTTGGTTCAATCACAGTTTGACATCCCCACTCATCTaGATATCTGTGTGCATGGAC +
Preference number: 5 (lower is better)
Translates to: GLCISRALGVCTWFNHSLTSPLI*ISVCMD
Trigger: GTCCATGCACACAGATATCAAGATGAGTGGGGATGT...CAAACTGTGATTGAACCAAGTGCAGACTCCTAATGCTCTTGAAATACACAGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543440.7
CDS TCA 90 bp ATACATAGGCAAGAAAGCTCTTACAAGGAATCCAGAACTGGGAGTTaGGAGGCTTGGGTACTAATGGCAATTCTGACATGGCGGTTGAAA +
Preference number: 5 (lower is better)
Translates to: IHRQESSYKESRTGS*EAWVLMAILTWRLK
Trigger: TTTCAACCGCCATGTCAGAATTGCCATTAGTACCCAAGCCTCTCAACTCCCAGTTCTGGATTCCTTGTAAGAGCTTTCTTGCCTATGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606153.1
CDS-3UTR CAA 90 bp GGGTTGTGGCCAAGTTCAGAGTCAAAACTATTATCTCCCCTTCTGGTGTTTGGCGTTTTAATCTGCCTGTaGAAATCTAGGCCATTTCGA +
Preference number: 5 (lower is better)
Translates to: GLWPSSESKLLSPLLVFGVLICL*KSRPFR
Trigger: TCGAAATGGCCTAGATTTCAACAGGCAGATTAAAAC...GCCAAACACCAGAAGGGGAGATAATAGTTTTGACTCTGAACTTGGCCACAACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CAA 90 bp TCAGAAAACTTAGCTGTACAGAGAAAACATCAAGGCTTTGGTGGAGATATCAGACTCTGCTTGAAGGTCTaGGCAAACTTCTCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: SENLAVQRKHQGFGGDIRLCLKV*ANFSSS
Trigger: GGAGCTGGAGAAGTTTGCCAAGACCTTCAAGCAGAG...TCTGATATCTCCACCAAAGCCTTGATGTTTTCTCTGTACAGCTAAGTTTTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CAA 90 bp GAAAGGGCTATATACAGGTACTTTGCCACCATCATTGTTGTGTGTTTGCTCTTGTGCTTTGGAGTTATTTaGAGATGCAGTGGGGCTGCT +
Preference number: 5 (lower is better)
Translates to: ERAIYRYFATIIVVCLLLCFGVI*RCSGAA
Trigger: AGCAGCCCCACTGCATCTCAAAATAACTCCAAAGCA...CAAGAGCAAACACACAACAATGATGGTGGCAAAGTACCTGTATATAGCCCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CAA 90 bp TCAGAAAACTTAGCTGTACAGAGAAAACATCAAGGCTTTGGTGGAGATATCAGAGGATCAGTTCAGGGGTaGTGGCCAAGTTCAGAGTCA +
Preference number: 5 (lower is better)
Translates to: SENLAVQRKHQGFGGDIRGSVQG*WPSSES
Trigger: TGACTCTGAACTTGGCCACAACCCCTGAACTGATCC...TCTGATATCTCCACCAAAGCCTTGATGTTTTCTCTGTACAGCTAAGTTTTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CAA 90 bp GAAAGGGCTATATACAGGTACTTTGCCACCATCATTGTTGTGTGTTTGCTCTTGAGTAGGAGAAACTTTTaGGTCTCAGTGGAGGTAGGT +
Preference number: 5 (lower is better)
Translates to: ERAIYRYFATIIVVCLLLSRRNF*VSVEVG
Trigger: ACCTACCTCCACTGAGACCAAAAAGTTTCTCCTACT...CAAGAGCAAACACACAACAATGATGGTGGCAAAGTACCTGTATATAGCCCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CAA 90 bp AAGGCAATCTGTCTGTATATAGAAGGCATGATTCCCTTCCTTCCAGGGGGAATAATTAGGAGTCTGCACTaGGTTCAATCACAGTTTGGA +
Preference number: 5 (lower is better)
Translates to: KAICLYIEGMIPFLPGGIIRSLH*VQSQFG
Trigger: TCCAAACTGTGATTGAACCAAGTGCAGACTCCTAAT...TATTCCCCCTGGAAGGAAGGGAATCATGCCTTCTATATACAGACAGATTGCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS TCA 90 bp GGTCTCTCTGCTACCAGTCTCTCCATGCCAAAATATGATAAGAGATaGGAGTTGATCTTGAAGATTCTAAGATCTCTTCCAGCTGTAAGC +
Preference number: 5 (lower is better)
Translates to: GLSATSLSMPKYDKR*ELILKILRSLPAVS
Trigger: GCTTACAGCTGGAAGAGATCTTAGAATCTTCAAGATCAACTCTCATCTCTTATCATATTTTGGCATGGAGAGACTGGTAGCAGAGAGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606153.1
CDS-3UTR CAA 90 bp GTGTATTTCAAGAGCATTAGGAGTCTGCACTTGGTTCAATCACAGTTTGGATCTACATCCCCACTCATCTaGATATCCCTTCCTCCTTTA +
Preference number: 5 (lower is better)
Translates to: VYFKSIRSLHLVQSQFGSTSPLI*ISLPPL
Trigger: TAAAGGAGGAAGGGATATCAAGATGAGTGGGGATGT...AGATCCAAACTGTGATTGAACCAAGTGCAGACTCCTAATGCTCTTGAAATACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260264.8
CDS-3UTR CAA 90 bp GGGCTGTGTATTTCAAGAGCATTAGGAGTCTGCACTTGGTTCAATCACAGTTTGGTTTTAATCTGCCTGTaGAAATCTAGGCCATTTCGA +
Preference number: 5 (lower is better)
Translates to: GLCISRALGVCTWFNHSLVLICL*KSRPFR
Trigger: TCGAAATGGCCTAGATTTCAACAGGCAGATTAAAAC...CAAACTGTGATTGAACCAAGTGCAGACTCCTAATGCTCTTGAAATACACAGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CAA 90 bp GTGTATTTCAAGAGCATTAGGAGTCTGCACTTGGTTCAATCACAGTTTGGATCTGGGTTTTGGGTTATCTaGAAACCTCTTCTCCAGAGT +
Preference number: 5 (lower is better)
Translates to: VYFKSIRSLHLVQSQFGSGFWVI*KPLLQS
Trigger: ACTCTGGAGAAGAGGTTTCAAGATAACCCAAAACCC...AGATCCAAACTGTGATTGAACCAAGTGCAGACTCCTAATGCTCTTGAAATACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CAA 90 bp TCAGAAAACTTAGCTGTACAGAGAAAACATCAAGGCTTTGGTGGAGATATCAGATGCTTTGGAGTTATTTaGAGATGCAGTGGGGCTGCT +
Preference number: 5 (lower is better)
Translates to: SENLAVQRKHQGFGGDIRCFGVI*RCSGAA
Trigger: AGCAGCCCCACTGCATCTCAAAATAACTCCAAAGCA...TCTGATATCTCCACCAAAGCCTTGATGTTTTCTCTGTACAGCTAAGTTTTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CAA 90 bp TTTGGGATCAGTTCAGGGGTTGTGGCCAAGTTCAGAGTCAAAACTATTATCTCCAAGAGTCTGGGTTCATaGATAGTGGAGATTTTCTTC +
Preference number: 5 (lower is better)
Translates to: FGISSGVVAKFRVKTIISKSLGS*IVEIFF
Trigger: GAAGAAAATCTCCACTATCAATGAACCCAGACTCTT...GGAGATAATAGTTTTGACTCTGAACTTGGCCACAACCCCTGAACTGATCCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CAA 90 bp AAGGCAATCTGTCTGTATATAGAAGGCATGATTCCCTTCCTTCCAGGGGGAATAGAAAACATCAAGGCTTaGGTGGAGATATCAGATTCA +
Preference number: 5 (lower is better)
Translates to: KAICLYIEGMIPFLPGGIENIKA*VEISDS
Trigger: TGAATCTGATATCTCCACCAAAGCCTTGATGTTTTC...TATTCCCCCTGGAAGGAAGGGAATCATGCCTTCTATATACAGACAGATTGCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CAA 90 bp GGGCTGTGTATTTCAAGAGCATTAGGAGTCTGCACTTGGTTCAATCACAGTTTGCTATATACAGGTACTTaGCCACCATCATTGTTGTGT +
Preference number: 5 (lower is better)
Translates to: GLCISRALGVCTWFNHSLLYTGT*PPSLLC
Trigger: ACACAACAATGATGGTGGCAAAGTACCTGTATATAG...CAAACTGTGATTGAACCAAGTGCAGACTCCTAATGCTCTTGAAATACACAGCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CAA 90 bp ATTGCCACAGTGAAGCTGGCTAAAATATTTGGAACTAGAAGGCAAGGGCATAGGAACAGTGAGATTCCTTaGAATCTCAACAGTTTCCTA +
Preference number: 5 (lower is better)
Translates to: IATVKLAKIFGTRRQGHRNSEIP*NLNSFL
Trigger: TAGGAAACTGTTGAGATTCAAAGGAATCTCACTGTT...CCTATGCCCTTGCCTTCTAGTTCCAAATATTTTAGCCAGCTTCACTGTGGCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CAA 90 bp TCAGAAAACTTAGCTGTACAGAGAAAACATCAAGGCTTTGGTGGAGATATCAGAATTAGGAGTCTGCACTaGGTTCAATCACAGTTTGGA +
Preference number: 5 (lower is better)
Translates to: SENLAVQRKHQGFGGDIRIRSLH*VQSQFG
Trigger: TCCAAACTGTGATTGAACCAAGTGCAGACTCCTAAT...TCTGATATCTCCACCAAAGCCTTGATGTTTTCTCTGTACAGCTAAGTTTTCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CAA 90 bp TCAGAAAACTTAGCTGTACAGAGAAAACATCAAGGCTTTGGTGGAGATATCAGATTGCCACCATCATTGTaGTGTGTTTGCTCTTGTGTT +
Preference number: 5 (lower is better)
Translates to: SENLAVQRKHQGFGGDIRLPPSL*CVCSCV
Trigger: AACACAAGAGCAAACACACAACAATGATGGTGGCAA...TCTGATATCTCCACCAAAGCCTTGATGTTTTCTCTGTACAGCTAAGTTTTCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CAA 90 bp TCAGAAAACTTAGCTGTACAGAGAAAACATCAAGGCTTTGGTGGAGATATCAGAGAAAACATCAAGGCTTaGGTGGAGATATCAGATTCA +
Preference number: 5 (lower is better)
Translates to: SENLAVQRKHQGFGGDIRENIKA*VEISDS
Trigger: TGAATCTGATATCTCCACCAAAGCCTTGATGTTTTC...TCTGATATCTCCACCAAAGCCTTGATGTTTTCTCTGTACAGCTAAGTTTTCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS-3UTR CAA 90 bp TCAGAAAACTTAGCTGTACAGAGAAAACATCAAGGCTTTGGTGGAGATATCAGACTATATACAGGTACTTaGCCACCATCATTGTTGTGT +
Preference number: 5 (lower is better)
Translates to: SENLAVQRKHQGFGGDIRLYTGT*PPSLLC
Trigger: ACACAACAATGATGGTGGCAAAGTACCTGTATATAG...TCTGATATCTCCACCAAAGCCTTGATGTTTTCTCTGTACAGCTAAGTTTTCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS GCA 72 bp TGCCGGAGCCGTCGCCGCCACTGTCGCGCGCTCCGCTaGTCCGGCCCGGGCAACACTCGGCGCCGCCAGGAT +
Preference number: 6 (lower is better)
Translates to: CRSRRRHCRALR*SGPGNTRRRQD
Trigger: ATCCTGGCGGCGCCGAGTGTTGCCCGGGCCGGAGCAGCGGAGCGCGCGACAGTGGCGGCGACGGCTCCGGCA
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543440.7
CDS CAA 90 bp GGATGCCAGTCCCGGCCCAGTCTGTGGGAGGAGGAGACCGCTTTGTaGCTGTGGAAAGGGGAGGAGATTTGGCTGCAGACCTTGCTGCCC +
Preference number: 6 (lower is better)
Translates to: GCQSRPSLWEEETAL*LWKGEEIWLQTLLP
Trigger: GGGCAGCAAGGTCTGCAGCCAAATCTCCTCCCCTTTCCACAGCAACAAAGCGGTCTCCTCCTCCCACAGACTGGGCCGGGACTGGCATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS CAA 90 bp GCGTGGGGACCGAGGGGGAGGAACATGAGAGGCAGCCTCCTCCTCTaGTTTGCCCACATCCTGCATGGTCCTAGCATCGATCACACAGCC +
Preference number: 6 (lower is better)
Translates to: AWGPRGRNMRGSLLL*FAHILHGPSIDHTA
Trigger: GGCTGTGTGATCGATGCTAGGACCATGCAGGATGTGGGCAAACAAGAGGAGGAGGCTGCCTCTCATGTTCCTCCCCCTCGGTCCCCACGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532638.1
CDS CCA 72 bp TCCGGACATCATGGCAGGTCCTTGACTCAGGTGGCATaGCCGATGGGAGAGGGTCTGCTGCAGGGAGTCACT +
Preference number: 6 (lower is better)
Translates to: SGHHGRSLTQVA*PMGEGLLQGVT
Trigger: AGTGACTCCCTGCAGCAGACCCTCTCCCATCGGCCATGCCACCTGAGTCAAGGACCTGCCATGATGTCCGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260264.8
ENST00000533620.5
ENST00000543440.7
CDS CAA 90 bp GGATGCCAGTCCCGGCCCAGTCTGTGGGAGGAGGAGACCGCTTTGTaGCTGTGGAAAGGGGAGGAGATTTGGCTGCAGACCTGGGTGAAA +
Preference number: 6 (lower is better)
Translates to: GCQSRPSLWEEETAL*LWKGEEIWLQTWVK
Trigger: TTTCACCCAGGTCTGCAGCCAAATCTCCTCCCCTTTCCACAGCAACAAAGCGGTCTCCTCCTCCCACAGACTGGGCCGGGACTGGCATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606153.1
CDS GCA 72 bp CCCTCTCCCAGACCTCAGCCCACTGGCCTATATACGTaGCCACTGCAGGAGGCAATCTGGAATAGTGGCCCA +
Preference number: 6 (lower is better)
Translates to: PSPRPQPTGLYT*PLQEAIWNSGP
Trigger: TGGGCCACTATTCCAGATTGCCTCCTGCAGTGGGCACGTATATAGGCCAGTGGGCTGAGGTCTGGGAGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606153.1
CDS GCA 72 bp CTGCAGCGTCAACCTCCTGGGCTTAAGTCATTCTCCTaGCTCAGGCTCCTGAACAGCTGGGGCTACAGGCGT +
Preference number: 6 (lower is better)
Translates to: LQRQPPGLKSFS*LRLLNSWGYRR
Trigger: ACGCCTGTAGCCCCAGCTGTTCAGGAGCCTGAGGCAGGAGAATGACTTAAGCCCAGGAGGTTGACGCTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606153.1
CDS CCA 72 bp AGTCCCCAAACCAGTCCTTCCACCTGCCCGCCTGTCTaGAGAGGCGTAGAGGCTAAGGAGGGTCAAGACGAT +
Preference number: 6 (lower is better)
Translates to: SPQTSPSTCPPV*RGVEAKEGQDD
Trigger: ATCGTCTTGACCCTCCTTAGCCTCTACGCCTCTCCAGACAGGCGGGCAGGTGGAAGGACTGGTTTGGGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606153.1
CDS CCA 72 bp GTTGTTTACCTGGGATGCCAGTCCCGGCCCAGTCTGTaGGAGGAGGAGACCGCTTTGTTGCTGTGGAAAGGG +
Preference number: 6 (lower is better)
Translates to: VVYLGCQSRPSL*EEETALLLWKG
Trigger: CCCTTTCCACAGCAACAAAGCGGTCTCCTCCTCCCACAGACTGGGCCGGGACTGGCATCCCAGGTAAACAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606153.1
CDS TCA 72 bp CCAGACATTTGGTTTCCGGACATCATGGCAGGTCCTTaGCTCAGGTGGCATGGCCGATGGGAGAGGGTCTGC +
Preference number: 6 (lower is better)
Translates to: PDIWFPDIMAGP*LRWHGRWERVC
Trigger: GCAGACCCTCTCCCATCGGCCATGCCACCTGAGTCAAGGACCTGCCATGATGTCCGGAAACCAAATGTCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260264.8
ENST00000533620.5
ENST00000543440.7
CDS TCA 72 bp GGTAGGGTTCGTGGCCATCTTGGTATGCCTGAGAAGTaGGCTGAGCCTGGCTCTCAGAGGAGCAATGCTGGG +
Preference number: 6 (lower is better)
Translates to: GRVRGHLGMPEK*AEPGSQRSNAG
Trigger: CCCAGCATTGCTCCTCTGAGAGCCAGGCTCAGCTCACTTCTCAGGCATACCAAGATGGCCACGAACCCTACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606153.1
CDS CCA 72 bp CCCAGTCTGTGGGAGGAGGAGACCGCTTTGTTGCTGTaGAAAGGGGAGGAGATTTGGCTGCAGACCTTGCTG +
Preference number: 6 (lower is better)
Translates to: PSLWEEETALLL*KGEEIWLQTLL
Trigger: CAGCAAGGTCTGCAGCCAAATCTCCTCCCCTTTCCACAGCAACAAAGCGGTCTCCTCCTCCCACAGACTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260264.8
ENST00000543440.7
CDS CAA 72 bp CCCAGACATTTGGTTTCCGGACATCATGGCAGGTCCTaGACTCAGGTGGCATGGCCGATGGGAGAGGGTCTG +
Preference number: 6 (lower is better)
Translates to: PRHLVSGHHGRS*TQVAWPMGEGL
Trigger: CAGACCCTCTCCCATCGGCCATGCCACCTGAGTCAAGGACCTGCCATGATGTCCGGAAACCAAATGTCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260264.8
ENST00000533620.5
ENST00000543440.7
CDS CCA 72 bp ACCAAGCAGATACGACCATACGGCTCTAAAGGGCAGTaGGCCTTAGCCAGAGGCATGTGGCTGACCAGGACA +
Preference number: 6 (lower is better)
Translates to: TKQIRPYGSKGQ*ALARGMWLTRT
Trigger: TGTCCTGGTCAGCCACATGCCTCTGGCTAAGGCCCACTGCCCTTTAGAGCCGTATGGTCGTATCTGCTTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606153.1
CDS CAA 90 bp TCAGTGAGAGCTGAGACATTCCTAGAGGAAACAGGAAGAATGGGGTaGTTTACCTGGGATGCCAGTCCCGGCCCAGTCTGTGGGAGGAGG +
Preference number: 6 (lower is better)
Translates to: SVRAETFLEETGRMG*FTWDASPGPVCGRR
Trigger: CCTCCTCCCACAGACTGGGCCGGGACTGGCATCCCAGGTAAACAACCCCATTCTTCCTGTTTCCTCTAGGAATGTCTCAGCTCTCACTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606153.1
CDS CCA 72 bp TGGCATTTAGCCCAGACATTTGGTTTCCGGACATCATaGCAGGTCCTTGACTCAGGTGGCATGGCCGATGGG +
Preference number: 6 (lower is better)
Translates to: WHLAQTFGFRTS*QVLDSGGMADG
Trigger: CCCATCGGCCATGCCACCTGAGTCAAGGACCTGCCATGATGTCCGGAAACCAAATGTCTGGGCTAAATGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260264.8
ENST00000533620.5
ENST00000543440.7
CDS CCA 72 bp ATACAGCTCATGCTGCTGTCGCCAATCTGTCCACCTTaGCATGAGACTGCACCTGGCCAGAAGAGGTGCCTT +
Preference number: 6 (lower is better)
Translates to: IQLMLLSPICPP*HETAPGQKRCL
Trigger: AAGGCACCTCTTCTGGCCAGGTGCAGTCTCATGCCAAGGTGGACAGATTGGCGACAGCAGCATGAGCTGTAT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606153.1
CDS TCA 72 bp GGTCCTAGCATCGATCACACAGCCAGCCTGAATCTTTaGGTGCTCACCCATGCTCGGCTCCTTTCCAAGTCT +
Preference number: 6 (lower is better)
Translates to: GPSIDHTASLNL*VLTHARLLSKS
Trigger: AGACTTGGAAAGGAGCCGAGCATGGGTGAGCACTCAAAGATTCAGGCTGGCTGTGTGATCGATGCTAGGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532638.1
CDS TCA 72 bp TCCTGCATGGTCCTAGCATCGATCACACAGCCAGCCTaGATCTTTGAGTGCTCACCCATGCTCGGCTCCTTT +
Preference number: 6 (lower is better)
Translates to: SCMVLASITQPA*IFECSPMLGSF
Trigger: AAAGGAGCCGAGCATGGGTGAGCACTCAAAGATTCAGGCTGGCTGTGTGATCGATGCTAGGACCATGCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532638.1
CDS GCA 72 bp GCCCAACCATCTGTGCAGAGCCATCTCATGCAGCTGTaGAGGTTATTAACTGTACAGGGGCACCCAGATCAG +
Preference number: 6 (lower is better)
Translates to: AQPSVQSHLMQL*RLLTVQGHPDQ
Trigger: CTGATCTGGGTGCCCCTGTACAGTTAATAACCTGCACAGCTGCATGAGATGGCTCTGCACAGATGGTTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606153.1
CDS CCA 72 bp GCAGGAGTGGGGCCATCAAACCACCAAAGCAGACAATaGGGTTGGTCATCCCAATCGCTTGTCACTCAACAG +
Preference number: 6 (lower is better)
Translates to: AGVGPSNHQSRQ*GWSSQSLVTQQ
Trigger: CTGTTGAGTGACAAGCGATTGGGATGACCAACCCCATTGTCTGCTTTGGTGGTTTGATGGCCCCACTCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606153.1
CDS CCA 72 bp AGGGAAAGTCCAGGGCTGAGCCTCTGGAAACTCCCTTaGGCAGTATGTATTATACCGGCTTCTCCATCCTCC +
Preference number: 6 (lower is better)
Translates to: RESPGLSLWKLP*AVCIIPASPSS
Trigger: GGAGGATGGAGAAGCCGGTATAATACATACTGCCCAAGGGAGTTTCCAGAGGCTCAGCCCTGGACTTTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606153.1
CDS CAA 72 bp GCTGAGACATTCCTAGAGGAAACAGGAAGAATGGGGTaGTTTACCTGGGATGCCAGTCCCGGCCCAGTCTGT +
Preference number: 6 (lower is better)
Translates to: AETFLEETGRMG*FTWDASPGPVC
Trigger: ACAGACTGGGCCGGGACTGGCATCCCAGGTAAACAACCCCATTCTTCCTGTTTCCTCTAGGAATGTCTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606153.1
CDS GCA 72 bp GTAGCTGGGTTATGGCTACAGAGGCCCAATCAAATCTaGGAGGATGCCAGACCAAGCAGATACGACCATACG +
Preference number: 6 (lower is better)
Translates to: VAGLWLQRPNQI*EDARPSRYDHT
Trigger: CGTATGGTCGTATCTGCTTGGTCTGGCATCCTCGCAGATTTGATTGGGCCTCTGTAGCCATAACCCAGCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606153.1
CDS CCA 72 bp ATTAACTGTACAGGGGCACCCAGATCAGGGGAGGAATaGCAGCTAAGATACAGCTCATGCTGCTGTCGCCAA +
Preference number: 6 (lower is better)
Translates to: INCTGAPRSGEE*QLRYSSCCCRQ
Trigger: TTGGCGACAGCAGCATGAGCTGTATCTTAGCTGCCATTCCTCCCCTGATCTGGGTGCCCCTGTACAGTTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606153.1
CDS CAA 90 bp TCCTTCCAGGGGGAATACAGGGCCAGCTGGAGTAGGAGAAACTTTTaGGTCTCAGTGGAGGTAGGTGGAATGATTCCATCGGTACCAAGA +
Preference number: 6 (lower is better)
Translates to: SFQGEYRASWSRRNF*VSVEVGGMIPSVPR
Trigger: TCTTGGTACCGATGGAATCATTCCACCTACCTCCACTGAGACCAAAAAGTTTCTCCTACTCCAGCTGGCCCTGTATTCCCCCTGGAAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260264.8
ENST00000529039.1
ENST00000532638.1
ENST00000543440.7
CDS CCA 72 bp GTGGGGCCATCAAACCACCAAAGCAGACAATGGGGTTaGTCATCCCAATCGCTTGTCACTCAACAGCACTTT +
Preference number: 6 (lower is better)
Translates to: VGPSNHQSRQWG*SSQSLVTQQHF
Trigger: AAAGTGCTGTTGAGTGACAAGCGATTGGGATGACCAACCCCATTGTCTGCTTTGGTGGTTTGATGGCCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606153.1
CDS CCA 72 bp ATTTTGGCTTTCCCTGCAGGAGAAGTAGCTGGGTTATaGCTACAGAGGCCCAATCAAATCTGCGAGGATGCC +
Preference number: 6 (lower is better)
Translates to: ILAFPAGEVAGL*LQRPNQICEDA
Trigger: GGCATCCTCGCAGATTTGATTGGGCCTCTGTAGCCATAACCCAGCTACTTCTCCTGCAGGGAAAGCCAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606153.1
CDS CCA 72 bp GCCCTCCTAGCACTGCCAGGCATTGCCACATACAGGTaGAGGCAAATCAGATACAGGGATAAACAGACATGT +
Preference number: 6 (lower is better)
Translates to: ALLALPGIATYR*RQIRYRDKQTC
Trigger: ACATGTCTGTTTATCCCTGTATCTGATTTGCCTCCACCTGTATGTGGCAATGCCTGGCAGTGCTAGGAGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606153.1
CDS CCA 72 bp AAATCCAGGCTATTTGAAACACATGTGCTACAACTTTaGCACCACGATCACTGTCCCCACCCCCTGCCACCT +
Preference number: 6 (lower is better)
Translates to: KSRLFETHVLQL*HHDHCPHPLPP
Trigger: AGGTGGCAGGGGGTGGGGACAGTGATCGTGGTGCCAAAGTTGTAGCACATGTGTTTCAAATAGCCTGGATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606153.1
CDS CCA 72 bp TTGCTGTGGAAAGGGGAGGAGATTTGGCTGCAGACCTaGGTGAAAGGGGAGGGACAAAGGAACAGACAAATA +
Preference number: 6 (lower is better)
Translates to: LLWKGEEIWLQT*VKGEGQRNRQI
Trigger: TATTTGTCTGTTCCTTTGTCCCTCCCCTTTCACCCAGGTCTGCAGCCAAATCTCCTCCCCTTTCCACAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606153.1
CDS CCA 72 bp GATCTTAAGGACATCTATCATTCCACAAGGATAGAGTaGAATCTGGGCCTAGGGGTCCAGGCACTGTGGCCA +
Preference number: 6 (lower is better)
Translates to: DLKDIYHSTRIE*NLGLGVQALWP
Trigger: TGGCCACAGTGCCTGGACCCCTAGGCCCAGATTCCACTCTATCCTTGTGGAATGATAGATGTCCTTAAGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606153.1
CDS CAA 72 bp GTTGGTCATCCCAATCGCTTGTCACTCAACAGCACTTaGGGGTCTCTGTTTTCCCTAGGCTGTTCTGGGTCA +
Preference number: 6 (lower is better)
Translates to: VGHPNRLSLNST*GSLFSLGCSGS
Trigger: TGACCCAGAACAGCCTAGGGAAAACAGAGACCCCAAAGTGCTGTTGAGTGACAAGCGATTGGGATGACCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606153.1
CDS CAA 72 bp AGTGGGGCCATCAAACCACCAAAGCAGACAATGGGGTaGGTCATCCCAATCGCTTGTCACTCAACAGCACTT +
Preference number: 6 (lower is better)
Translates to: SGAIKPPKQTMG*VIPIACHSTAL
Trigger: AAGTGCTGTTGAGTGACAAGCGATTGGGATGACCAACCCCATTGTCTGCTTTGGTGGTTTGATGGCCCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606153.1
CDS GCA 72 bp GTTATGGCTACAGAGGCCCAATCAAATCTGCGAGGATaGCAGACCAAGCAGATACGACCATACGGCTCTAAA +
Preference number: 6 (lower is better)
Translates to: VMATEAQSNLRG*QTKQIRPYGSK
Trigger: TTTAGAGCCGTATGGTCGTATCTGCTTGGTCTGGCATCCTCGCAGATTTGATTGGGCCTCTGTAGCCATAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606153.1
CDS TCA 72 bp TCAAGACGATCTACTCTGGGATCTGATTACCAGAGCTaGAGAAAACCAAGAAGGGAAAGGATGCAGGGTGGC +
Preference number: 6 (lower is better)
Translates to: SRRSTLGSDYQS*RKPRRERMQGG
Trigger: GCCACCCTGCATCCTTTCCCTTCTTGGTTTTCTTCAGCTCTGGTAATCAGATCCCAGAGTAGATCGTCTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606153.1
CDS CCA 72 bp CAGCACTTTGGGGTCTCTGTTTTCCCTAGGCTGTTCTaGGTCACAATGTACATACAGCATCTGCTGATGTTG +
Preference number: 6 (lower is better)
Translates to: QHFGVSVFPRLF*VTMYIQHLLML
Trigger: CAACATCAGCAGATGCTGTATGTACATTGTGACCCAGAACAGCCTAGGGAAAACAGAGACCCCAAAGTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606153.1
CDS CCA 72 bp GAGCTGAAGAAAACCAAGAAGGGAAAGGATGCAGGGTaGCTGCTGAGAATTCAAGCTAGGGCTGAGGATTTT +
Preference number: 6 (lower is better)
Translates to: ELKKTKKGKDAG*LLRIQARAEDF
Trigger: AAAATCCTCAGCCCTAGCTTGAATTCTCAGCAGCCACCCTGCATCCTTTCCCTTCTTGGTTTTCTTCAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606153.1
CDS TCA 72 bp AGGCTAAGGAGGGTCAAGACGATCTACTCTGGGATCTaGTTACCAGAGCTGAAGAAAACCAAGAAGGGAAAG +
Preference number: 6 (lower is better)
Translates to: RLRRVKTIYSGI*LPELKKTKKGK
Trigger: CTTTCCCTTCTTGGTTTTCTTCAGCTCTGGTAATCAGATCCCAGAGTAGATCGTCTTGACCCTCCTTAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606153.1
CDS GCA 72 bp TCCCAAAGCATCTCCTCAATCATCCCCTCTTCTTATTaGCACAACTCTAAGCCAATCCTTTATGACCCCTCC +
Preference number: 6 (lower is better)
Translates to: SQSISSIIPSSY*HNSKPILYDPS
Trigger: GGAGGGGTCATAAAGGATTGGCTTAGAGTTGTGGCAATAAGAAGAGGGGATGATTGAGGAGATGCTTTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606153.1
CDS CAA 90 bp GCAAGAAAGCTCTTACAAGGAATCCAGAACTGGGAGTTGAGAGGCTaGGGTACTAATGGCAATTCTGACATGGCGGTTGAAATGGATACA +
Preference number: 6 (lower is better)
Translates to: ARKLLQGIQNWELRG*GTNGNSDMAVEMDT
Trigger: TGTATCCATTTCAACCGCCATGTCAGAATTGCCATTAGTACCCAAGCCTCTCAACTCCCAGTTCTGGATTCCTTGTAAGAGCTTTCTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606153.1
CDS TCA 72 bp CAAGAAAGCTCTTACAAGGAATCCAGAACTGGGAGTTaGGAGGCTTGGGTACTAATGGCAATTCTGACATGG +
Preference number: 6 (lower is better)
Translates to: QESSYKESRTGS*EAWVLMAILTW
Trigger: CCATGTCAGAATTGCCATTAGTACCCAAGCCTCTCAACTCCCAGTTCTGGATTCCTTGTAAGAGCTTTCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606153.1
CDS CAA 72 bp AACGTACCCTTAAACCTAGAACCATGCTGTGCCTATTaGGGGTCAGGAATGAATCCGATCTTAAGGACATCT +
Preference number: 6 (lower is better)
Translates to: NVPLNLEPCCAY*GSGMNPILRTS
Trigger: AGATGTCCTTAAGATCGGATTCATTCCTGACCCCAAATAGGCACAGCATGGTTCTAGGTTTAAGGGTACGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606153.1
CDS GCA 72 bp ATAGGAAAACGTACCCTTAAACCTAGAACCATGCTGTaGCTATTTGGGGTCAGGAATGAATCCGATCTTAAG +
Preference number: 6 (lower is better)
Translates to: IGKRTLKPRTML*LFGVRNESDLK
Trigger: CTTAAGATCGGATTCATTCCTGACCCCAAATAGGCACAGCATGGTTCTAGGTTTAAGGGTACGTTTTCCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606153.1
CDS TCA 72 bp GCTACCAGTCTCTCCATGCCAAAATATGATAAGAGATaGGAGTTGATCTTGAAGATTCTAAGATCTCTTCCA +
Preference number: 6 (lower is better)
Translates to: ATSLSMPKYDKR*ELILKILRSLP
Trigger: TGGAAGAGATCTTAGAATCTTCAAGATCAACTCTCATCTCTTATCATATTTTGGCATGGAGAGACTGGTAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606153.1