RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for POMGNT2 (Homo sapiens)

Ensembl gene IDs: ENSG00000144647

Ensembl transcript IDs: ENST00000344697.3, ENST00000441964.1

Found 332 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR GCA 90 bp TCCCTGCTAAGGAACTTCTCCAGGGGTACAAATGTTCAGGATGGGAGAAGGGGACCAGGGACGCTGAACTaGAGGAGCCACCTTCCCGAG +
Preference number: 2 (lower is better)
Translates to: SLLRNFSRGTNVQDGRRGPGTLN*RSHLPE
Trigger: CTCGGGAAGGTGGCTCCTGCAGTTCAGCGTCCCTGG...TCCCCTTCTCCCATCCTGAACATTTGTACCCCTGGAGAAGTTCCTTAGCAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
3UTR-3UTR TCA 90 bp GGATGGGAGAAGGGGAAGTCAGGTCCCTTATCTCTAGGGCAAAGAGGAGTGCTGCCAGAGACAACAAGATaGTGTGGAGGCACAGGCCTG +
Preference number: 2 (lower is better)
Translates to: GWEKGKSGPLSLGQRGVLPETTR*CGGTGL
Trigger: CAGGCCTGTGCCTCCACATCATCTTGTTGTCTCTGG...CAGCACTCCTCTTTGCCCTAGAGATAAGGGACCTGACTTCCCCTTCTCCCATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
3UTR-3UTR TCA 90 bp CCACCCAATCAAACAGTACATGATTACTCGGTTTCCAGAAATCTGGATACCAGATGGGCCCAGGGACGCTaGACTGCAGGAGCCACCTTC +
Preference number: 2 (lower is better)
Translates to: PPNQTVHDYSVSRNLDTRWAQGR*TAGATF
Trigger: GAAGGTGGCTCCTGCAGTTCAGCGTCCCTGGGCCCA...TCTGGTATCCAGATTTCTGGAAACCGAGTAATCATGTACTGTTTGATTGGGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
3UTR-3UTR CCA 90 bp ATTCTTTGCTTCCTCCTCTCCTCTTCCTCCTCCCTGCTAAGGAACTTCTCCAGGGACAACAAGATGATGTaGAGGCACAGGCCTGCTCAA +
Preference number: 2 (lower is better)
Translates to: ILCFLLSSSSSLLRNFSRDNKMM*RHRPAQ
Trigger: TTGAGCAGGCCTGTGCCTCCACATCATCTTGTTGTC...CCTGGAGAAGTTCCTTAGCAGGGAGGAGGAAGAGGAGAGGAGGAAGCAAAGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
3UTR-3UTR TCA 90 bp TTCACTGGGATGGAAGCAGATGAACCACCCAATCAAACAGTACATGATTACTCGCAAAGAGGAGTGCTGTaGCACCACACCCCAGAGACA +
Preference number: 2 (lower is better)
Translates to: FTGMEADEPPNQTVHDYSQRGVL*HHTPET
Trigger: TGTCTCTGGGGTGTGGTGTCACAGCACTCCTCTTTG...CGAGTAATCATGTACTGTTTGATTGGGTGGTTCATCTGCTTCCATCCCAGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
3UTR-3UTR TCA 90 bp CAGTACATGATTACTCGGTTTCCAGAAATCTGGATACCAGAAAAACTCAGTAGGCCAGAGACAACAAGATaGTGTGGAGGCACAGGCCTG +
Preference number: 2 (lower is better)
Translates to: QYMITRFPEIWIPEKLSRPETTR*CGGTGL
Trigger: CAGGCCTGTGCCTCCACATCATCTTGTTGTCTCTGG...CCTACTGAGTTTTTCTGGTATCCAGATTTCTGGAAACCGAGTAATCATGTACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
3UTR-3UTR TCA 90 bp AAACAGTACATGATTACTCGGTTTCCAGAAATCTGGATACCAGAAAAACTCAGTCAAAGAGGAGTGCTGTaGCACCACACCCCAGAGACA +
Preference number: 2 (lower is better)
Translates to: KQYMITRFPEIWIPEKLSQRGVL*HHTPET
Trigger: TGTCTCTGGGGTGTGGTGTCACAGCACTCCTCTTTG...ACTGAGTTTTTCTGGTATCCAGATTTCTGGAAACCGAGTAATCATGTACTGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
3UTR-3UTR TCA 90 bp CAGTACATGATTACTCGGTTTCCAGAAATCTGGATACCAGAAAAACTCAGTAGGGCCAGAGGTTCCTTGTaGTTCTTTGCTTCCTCCTCT +
Preference number: 2 (lower is better)
Translates to: QYMITRFPEIWIPEKLSRARGSL*FFASSS
Trigger: AGAGGAGGAAGCAAAGAATCACAAGGAACCTCTGGC...CCTACTGAGTTTTTCTGGTATCCAGATTTCTGGAAACCGAGTAATCATGTACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
3UTR-3UTR GCA 90 bp AAGCAGATGAACCACCCAATCAAACAGTACATGATTACTCGGTTTCCAGAAATCGTGGAGGCACAGGCCTaGTCAATAAATAGTTCCCAG +
Preference number: 2 (lower is better)
Translates to: KQMNHPIKQYMITRFPEIVEAQA*SINSSQ
Trigger: CTGGGAACTATTTATTGAGCAGGCCTGTGCCTCCAC...GATTTCTGGAAACCGAGTAATCATGTACTGTTTGATTGGGTGGTTCATCTGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
3UTR-3UTR CCA 90 bp AAACAGTACATGATTACTCGGTTTCCAGAAATCTGGATACCAGAAAAACTCAGTGACAACAAGATGATGTaGAGGCACAGGCCTGCTCAA +
Preference number: 2 (lower is better)
Translates to: KQYMITRFPEIWIPEKLSDNKMM*RHRPAQ
Trigger: TTGAGCAGGCCTGTGCCTCCACATCATCTTGTTGTC...ACTGAGTTTTTCTGGTATCCAGATTTCTGGAAACCGAGTAATCATGTACTGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
3UTR-3UTR CCA 90 bp ATTTCACTGGGATGGAAGCAGATGAACCACCCAATCAAACAGTACATGATTACTTACAAATGTTCAGGATaGGAGAAGGGGAAGTCAGGT +
Preference number: 2 (lower is better)
Translates to: ISLGWKQMNHPIKQYMITYKCSG*EKGKSG
Trigger: ACCTGACTTCCCCTTCTCCCATCCTGAACATTTGTA...AGTAATCATGTACTGTTTGATTGGGTGGTTCATCTGCTTCCATCCCAGTGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
3UTR GCA 72 bp TCCACAGTGGGATTAATGGGCCCAGGGACGCTGAACTaGAGGAGCCACCTTCCCGAGGCCAGGCTGTGGCCT +
Preference number: 3 (lower is better)
Translates to: STVGLMGPGTLN*RSHLPEARLWP
Trigger: AGGCCACAGCCTGGCCTCGGGAAGGTGGCTCCTGCAGTTCAGCGTCCCTGGGCCCATTAATCCCACTGTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
3UTR TCA 72 bp AGGAAACATCAGGATCACCTAGCCAGAGGTTCCTTGTaGTTCTTTGCTTCCTCCTCTCCTCTTCCTCCTCCC +
Preference number: 3 (lower is better)
Translates to: RKHQDHLARGSL*FFASSSPLPPP
Trigger: GGGAGGAGGAAGAGGAGAGGAGGAAGCAAAGAATCACAAGGAACCTCTGGCTAGGTGATCCTGATGTTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR GCA 90 bp ACAGTGGGATTAATGGGCCCAGGGACGCTGAACTGCAGGAGCCACCTTCCCGAGGCCTCGGAGGCGCCATaGACTGACGCCTGGCACCGT +
Preference number: 4 (lower is better)
Translates to: TVGLMGPGTLNCRSHLPEASEAP*TDAWHR
Trigger: ACGGTGCCAGGCGTCAGTGCATGGCGCCTCCGAGGC...CTCGGGAAGGTGGCTCCTGCAGTTCAGCGTCCCTGGGCCCATTAATCCCACTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR TCA 90 bp CACAGTGGGATTAATGGGCCCAGGGACGCTGAACTGCAGGAGCCACCTTCCCGATGGGCCCAGGGACGCTaGACTGCAGGAGCCACCTTC +
Preference number: 4 (lower is better)
Translates to: HSGINGPRDAELQEPPSRWAQGR*TAGATF
Trigger: GAAGGTGGCTCCTGCAGTTCAGCGTCCCTGGGCCCA...TCGGGAAGGTGGCTCCTGCAGTTCAGCGTCCCTGGGCCCATTAATCCCACTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR CCA 90 bp ACAGTGGGATTAATGGGCCCAGGGACGCTGAACTGCAGGAGCCACCTTCCCGAGAAGAGCCGTGCCTCGTaGGCCAGGCCGGGAAACTGC +
Preference number: 4 (lower is better)
Translates to: TVGLMGPGTLNCRSHLPEKSRAS*ARPGNC
Trigger: GCAGTTTCCCGGCCTGGCCCACGAGGCACGGCTCTT...CTCGGGAAGGTGGCTCCTGCAGTTCAGCGTCCCTGGGCCCATTAATCCCACTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR TCA 90 bp CACAGTGGGATTAATGGGCCCAGGGACGCTGAACTGCAGGAGCCACCTTCCCGAACACCAGGAGGGCGTTaGACACCGCCGAGAGGTGCA +
Preference number: 4 (lower is better)
Translates to: HSGINGPRDAELQEPPSRTPGGR*TPPRGA
Trigger: TGCACCTCTCGGCGGTGTTCAACGCCCTCCTGGTGT...TCGGGAAGGTGGCTCCTGCAGTTCAGCGTCCCTGGGCCCATTAATCCCACTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR CCA 90 bp ACAGTGGGATTAATGGGCCCAGGGACGCTGAACTGCAGGAGCCACCTTCCCGAGGCTCCTCCTCCAGTGTaGCTGCATGCTCACGCAGCC +
Preference number: 4 (lower is better)
Translates to: TVGLMGPGTLNCRSHLPEAPPPV*LHAHAA
Trigger: GGCTGCGTGAGCATGCAGCCACACTGGAGGAGGAGC...CTCGGGAAGGTGGCTCCTGCAGTTCAGCGTCCCTGGGCCCATTAATCCCACTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR CCA 90 bp CACAGTGGGATTAATGGGCCCAGGGACGCTGAACTGCAGGAGCCACCTTCCCGAGTCGATCCTCAGTGCTaGGGCTGGCTCTGTGGCCTG +
Preference number: 4 (lower is better)
Translates to: HSGINGPRDAELQEPPSRVDPQC*GWLCGL
Trigger: CAGGCCACAGAGCCAGCCCCAGCACTGAGGATCGAC...TCGGGAAGGTGGCTCCTGCAGTTCAGCGTCCCTGGGCCCATTAATCCCACTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR TCA 90 bp CTTTGCTTCCTCCTCTCCTCTTCCTCCTCCCTGCTAAGGAACTTCTCCAGGGGTCTGTGGCCTGTCGGCTaGGGGCCAGCTCCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: LCFLLSSSSSLLRNFSRGLWPVG*GPAPPP
Trigger: TGGAGGAGGAGCTGGCCCTCAGCCGACAGGCCACAG...ACCCCTGGAGAAGTTCCTTAGCAGGGAGGAGGAAGAGGAGAGGAGGAAGCAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR TCA 90 bp ACAGTGGGATTAATGGGCCCAGGGACGCTGAACTGCAGGAGCCACCTTCCCGAGGAGGCTGCTTGGGGCTaGGCAGCTTGTAGAGGTCGA +
Preference number: 4 (lower is better)
Translates to: TVGLMGPGTLNCRSHLPEEAAWG*AACRGR
Trigger: TCGACCTCTACAAGCTGCTCAGCCCCAAGCAGCCTC...CTCGGGAAGGTGGCTCCTGCAGTTCAGCGTCCCTGGGCCCATTAATCCCACTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR GCA 90 bp CACAGTGGGATTAATGGGCCCAGGGACGCTGAACTGCAGGAGCCACCTTCCCGACATACTGGAGGTCCATaGCAGGCAGCATGGCCAGCG +
Preference number: 4 (lower is better)
Translates to: HSGINGPRDAELQEPPSRHTGGP*QAAWPA
Trigger: CGCTGGCCATGCTGCCTGGCATGGACCTCCAGTATG...TCGGGAAGGTGGCTCCTGCAGTTCAGCGTCCCTGGGCCCATTAATCCCACTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR CCA 90 bp ACAGTGGGATTAATGGGCCCAGGGACGCTGAACTGCAGGAGCCACCTTCCCGAGCGCCAGGCTACATACTaGAGGTCCATGCCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: TVGLMGPGTLNCRSHLPERQATY*RSMPGS
Trigger: GCTGCCTGGCATGGACCTCCAGTATGTAGCCTGGCG...CTCGGGAAGGTGGCTCCTGCAGTTCAGCGTCCCTGGGCCCATTAATCCCACTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR TCA 90 bp GGATGGGAGAAGGGGAAGTCAGGTCCCTTATCTCTAGGGCAAAGAGGAGTGCTGGCAGGAAGAGGGTGGTaGCCAGCTGGGCCCCATGCA +
Preference number: 4 (lower is better)
Translates to: GWEKGKSGPLSLGQRGVLAGRGW*PAGPHA
Trigger: TGCATGGGGCCCAGCTGGTCACCACCCTCTTCCTGC...CAGCACTCCTCTTTGCCCTAGAGATAAGGGACCTGACTTCCCCTTCTCCCATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR GCA 90 bp CACAGTGGGATTAATGGGCCCAGGGACGCTGAACTGCAGGAGCCACCTTCCCGAGAGAGGACACCTGCGTaGCCAGTAAGACATGCCCTC +
Preference number: 4 (lower is better)
Translates to: HSGINGPRDAELQEPPSRERTPA*PVRHAL
Trigger: GAGGGCATGTCTTACTGGGCACGCAGGTGTCCTCTC...TCGGGAAGGTGGCTCCTGCAGTTCAGCGTCCCTGGGCCCATTAATCCCACTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441964.1
CDS-3UTR CCA 90 bp TCCCTGCTAAGGAACTTCTCCAGGGGTACAAATGTTCAGGATGGGAGAAGGGGACAGCCAGCACAGGTTTaGCCGCGCCGCCGGGTTCGC +
Preference number: 4 (lower is better)
Translates to: SLLRNFSRGTNVQDGRRGQPAQV*PRRRVR
Trigger: GCGAACCCGGCGGCGCGGCCAAACCTGTGCTGGCTG...TCCCCTTCTCCCATCCTGAACATTTGTACCCCTGGAGAAGTTCCTTAGCAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344697.3
CDS-3UTR CCA 90 bp GGATGGGAGAAGGGGAAGTCAGGTCCCTTATCTCTAGGGCAAAGAGGAGTGCTGCCCGAGGCCAGGCTGTaGCCTGCTCGCTACGTGTTG +
Preference number: 4 (lower is better)
Translates to: GWEKGKSGPLSLGQRGVLPEARL*PARYVL
Trigger: CAACACGTAGCGAGCAGGCCACAGCCTGGCCTCGGG...CAGCACTCCTCTTTGCCCTAGAGATAAGGGACCTGACTTCCCCTTCTCCCATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR TCA 90 bp GGATGGGAGAAGGGGAAGTCAGGTCCCTTATCTCTAGGGCAAAGAGGAGTGCTGGGGGCCCTAATGAGATaGCGGCCACTGGGAAGCACC +
Preference number: 4 (lower is better)
Translates to: GWEKGKSGPLSLGQRGVLGALMR*RPLGST
Trigger: GGTGCTTCCCAGTGGCCGTCATCTCATTAGGGCCCC...CAGCACTCCTCTTTGCCCTAGAGATAAGGGACCTGACTTCCCCTTCTCCCATCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR TCA 90 bp ACAGTGGGATTAATGGGCCCAGGGACGCTGAACTGCAGGAGCCACCTTCCCGAGCCGGATCTCATTGCCTaGGACGAGGATGTTGGCCTT +
Preference number: 4 (lower is better)
Translates to: TVGLMGPGTLNCRSHLPEPDLIA*DEDVGL
Trigger: AAGGCCAACATCCTCGTCTCAGGCAATGAGATCCGG...CTCGGGAAGGTGGCTCCTGCAGTTCAGCGTCCCTGGGCCCATTAATCCCACTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR TCA 90 bp CTCCCTGCTAAGGAACTTCTCCAGGGGTACAAATGTTCAGGATGGGAGAAGGGGGCAGGAAGAGGGTGGTaGCCAGCTGGGCCCCATGCA +
Preference number: 4 (lower is better)
Translates to: LPAKELLQGYKCSGWEKGAGRGW*PAGPHA
Trigger: TGCATGGGGCCCAGCTGGTCACCACCCTCTTCCTGC...CCCCTTCTCCCATCCTGAACATTTGTACCCCTGGAGAAGTTCCTTAGCAGGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR GCA 90 bp GGATGGGAGAAGGGGAAGTCAGGTCCCTTATCTCTAGGGCAAAGAGGAGTGCTGCTCCTCCAGTGTGGCTaGATGCTCACGCAGCCGCAC +
Preference number: 4 (lower is better)
Translates to: GWEKGKSGPLSLGQRGVLLLQCG*MLTQPH
Trigger: GTGCGGCTGCGTGAGCATGCAGCCACACTGGAGGAG...CAGCACTCCTCTTTGCCCTAGAGATAAGGGACCTGACTTCCCCTTCTCCCATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR GCA 90 bp CTCCCTGCTAAGGAACTTCTCCAGGGGTACAAATGTTCAGGATGGGAGAAGGGGCAGATGCGGTCTGTGTaGGTGCGGCCCGTGCACACC +
Preference number: 4 (lower is better)
Translates to: LPAKELLQGYKCSGWEKGQMRSV*VRPVHT
Trigger: GGTGTGCACGGGCCGCACGCACACAGACCGCATCTG...CCCCTTCTCCCATCCTGAACATTTGTACCCCTGGAGAAGTTCCTTAGCAGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR GCA 90 bp CTTTGCTTCCTCCTCTCCTCTTCCTCCTCCCTGCTAAGGAACTTCTCCAGGGGTCCGACTGTCCACTTCTaGTTCCGTGGTCCTGGCCGG +
Preference number: 4 (lower is better)
Translates to: LCFLLSSSSSLLRNFSRGPTVHF*FRGPGR
Trigger: CCGGCCAGGACCACGGAAGCAGAAGTGGACAGTCGG...ACCCCTGGAGAAGTTCCTTAGCAGGGAGGAGGAAGAGGAGAGGAGGAAGCAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR GCA 90 bp CTCCTCCCTGCTAAGGAACTTCTCCAGGGGTACAAATGTTCAGGATGGGAGAAGGCCTCGGAGGCGCCATaGACTGACGCCTGGCACCGT +
Preference number: 4 (lower is better)
Translates to: LLPAKELLQGYKCSGWEKASEAP*TDAWHR
Trigger: ACGGTGCCAGGCGTCAGTGCATGGCGCCTCCGAGGC...CTTCTCCCATCCTGAACATTTGTACCCCTGGAGAAGTTCCTTAGCAGGGAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR CCA 90 bp GGATGGGAGAAGGGGAAGTCAGGTCCCTTATCTCTAGGGCAAAGAGGAGTGCTGCTGAGACGAGGATGTTaGCCTTCGGGCCCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: GWEKGKSGPLSLGQRGVLLRRGC*PSGPGA
Trigger: AGCCCCAGGGCCCGAAGGCCAACATCCTCGTCTCAG...CAGCACTCCTCTTTGCCCTAGAGATAAGGGACCTGACTTCCCCTTCTCCCATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR CCA 90 bp CTTTGCTTCCTCCTCTCCTCTTCCTCCTCCCTGCTAAGGAACTTCTCCAGGGGTCCACTTCTGCTTCCGTaGTCCTGGCCGGCCCTTCAC +
Preference number: 4 (lower is better)
Translates to: LCFLLSSSSSLLRNFSRGPLLLP*SWPALH
Trigger: GTGAAGGGCCGGCCAGGACCACGGAAGCAGAAGTGG...ACCCCTGGAGAAGTTCCTTAGCAGGGAGGAGGAAGAGGAGAGGAGGAAGCAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR CCA 90 bp ATTCTTTGCTTCCTCCTCTCCTCTTCCTCCTCCCTGCTAAGGAACTTCTCCAGGCCATGCACTGACGCCTaGCACCGTGCCTCCCGCACC +
Preference number: 4 (lower is better)
Translates to: ILCFLLSSSSSLLRNFSRPCTDA*HRASRT
Trigger: GGTGCGGGAGGCACGGTGCCAGGCGTCAGTGCATGG...CCTGGAGAAGTTCCTTAGCAGGGAGGAGGAAGAGGAGAGGAGGAAGCAAAGAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR CCA 90 bp CTCCTCCCTGCTAAGGAACTTCTCCAGGGGTACAAATGTTCAGGATGGGAGAAGCCATGCACTGACGCCTaGCACCGTGCCTCCCGCACC +
Preference number: 4 (lower is better)
Translates to: LLPAKELLQGYKCSGWEKPCTDA*HRASRT
Trigger: GGTGCGGGAGGCACGGTGCCAGGCGTCAGTGCATGG...CTTCTCCCATCCTGAACATTTGTACCCCTGGAGAAGTTCCTTAGCAGGGAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR CCA 90 bp CTCCCTGCTAAGGAACTTCTCCAGGGGTACAAATGTTCAGGATGGGAGAAGGGGCCAGGAGCTGAAGCCTaGACTCCGCGGGACGAAGCC +
Preference number: 4 (lower is better)
Translates to: LPAKELLQGYKCSGWEKGPGAEA*TPRDEA
Trigger: GGCTTCGTCCCGCGGAGTCCAGGCTTCAGCTCCTGG...CCCCTTCTCCCATCCTGAACATTTGTACCCCTGGAGAAGTTCCTTAGCAGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441964.1
CDS-3UTR TCA 90 bp GGATGGGAGAAGGGGAAGTCAGGTCCCTTATCTCTAGGGCAAAGAGGAGTGCTGGAACTGGTGAAAGCCTaGAGCCTGGACTCCGCGGGA +
Preference number: 4 (lower is better)
Translates to: GWEKGKSGPLSLGQRGVLELVKA*SLDSAG
Trigger: TCCCGCGGAGTCCAGGCTTCAGGCTTTCACCAGTTC...CAGCACTCCTCTTTGCCCTAGAGATAAGGGACCTGACTTCCCCTTCTCCCATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344697.3
CDS-3UTR GCA 90 bp CTTTGCTTCCTCCTCTCCTCTTCCTCCTCCCTGCTAAGGAACTTCTCCAGGGGTGTAGTCGATCCTCAGTaGTGGGGCTGGCTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: LCFLLSSSSSLLRNFSRGVVDPQ*WGWLCG
Trigger: GCCACAGAGCCAGCCCCAGCACTGAGGATCGACTAC...ACCCCTGGAGAAGTTCCTTAGCAGGGAGGAGGAAGAGGAGAGGAGGAAGCAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR GCA 90 bp ATTCTTTGCTTCCTCCTCTCCTCTTCCTCCTCCCTGCTAAGGAACTTCTCCAGGCATGAAGAAGAGCCGTaGCTCGTGGGCCAGGCCGGG +
Preference number: 4 (lower is better)
Translates to: ILCFLLSSSSSLLRNFSRHEEEP*LVGQAG
Trigger: CCCGGCCTGGCCCACGAGGCACGGCTCTTCTTCATG...CCTGGAGAAGTTCCTTAGCAGGGAGGAGGAAGAGGAGAGGAGGAAGCAAAGAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR CCA 90 bp ACAGTGGGATTAATGGGCCCAGGGACGCTGAACTGCAGGAGCCACCTTCCCGAGACGGGATGTCCACCTTaGTGTCCTGGTAGATTCGGA +
Preference number: 4 (lower is better)
Translates to: TVGLMGPGTLNCRSHLPETGCPP*CPGRFG
Trigger: TCCGAATCTACCAGGACACCAAGGTGGACATCCCGT...CTCGGGAAGGTGGCTCCTGCAGTTCAGCGTCCCTGGGCCCATTAATCCCACTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR TCA 90 bp TCCTCCCTGCTAAGGAACTTCTCCAGGGGTACAAATGTTCAGGATGGGAGAAGGGGGGCCCTAATGAGATaGCGGCCACTGGGAAGCACC +
Preference number: 4 (lower is better)
Translates to: SSLLRNFSRGTNVQDGRRGALMR*RPLGST
Trigger: GGTGCTTCCCAGTGGCCGTCATCTCATTAGGGCCCC...CCTTCTCCCATCCTGAACATTTGTACCCCTGGAGAAGTTCCTTAGCAGGGAGGA
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR TCA 90 bp CTTTGCTTCCTCCTCTCCTCTTCCTCCTCCCTGCTAAGGAACTTCTCCAGGGGTAGTAGCAGAGCCACTTaGAGCGGCAGATGCGGTCTG +
Preference number: 4 (lower is better)
Translates to: LCFLLSSSSSLLRNFSRGSSRAT*SGRCGL
Trigger: CAGACCGCATCTGCCGCTTCAAGTGGCTCTGCTACT...ACCCCTGGAGAAGTTCCTTAGCAGGGAGGAGGAAGAGGAGAGGAGGAAGCAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR TCA 90 bp GGATGGGAGAAGGGGAAGTCAGGTCCCTTATCTCTAGGGCAAAGAGGAGTGCTGAGTAGCAGAGCCACTTaGAGCGGCAGATGCGGTCTG +
Preference number: 4 (lower is better)
Translates to: GWEKGKSGPLSLGQRGVLSSRAT*SGRCGL
Trigger: CAGACCGCATCTGCCGCTTCAAGTGGCTCTGCTACT...CAGCACTCCTCTTTGCCCTAGAGATAAGGGACCTGACTTCCCCTTCTCCCATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR TCA 90 bp GGATGGGAGAAGGGGAAGTCAGGTCCCTTATCTCTAGGGCAAAGAGGAGTGCTGGCCGCTCAGGGTGTGTaGCTGTGTTCTCTGGCATCA +
Preference number: 4 (lower is better)
Translates to: GWEKGKSGPLSLGQRGVLAAQGV*LCSLAS
Trigger: TGATGCCAGAGAACACAGTCACACACCCTGAGCGGC...CAGCACTCCTCTTTGCCCTAGAGATAAGGGACCTGACTTCCCCTTCTCCCATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR TCA 90 bp TCCCTGCTAAGGAACTTCTCCAGGGGTACAAATGTTCAGGATGGGAGAAGGGGAAGAGAAGCCAGGAGCTaGAGCCTGGACTCCGCGGGA +
Preference number: 4 (lower is better)
Translates to: SLLRNFSRGTNVQDGRRGREARS*SLDSAG
Trigger: TCCCGCGGAGTCCAGGCTTCAGCTCCTGGCTTCTCT...TCCCCTTCTCCCATCCTGAACATTTGTACCCCTGGAGAAGTTCCTTAGCAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441964.1
CDS-3UTR GCA 90 bp ATTCTTTGCTTCCTCCTCTCCTCTTCCTCCTCCCTGCTAAGGAACTTCTCCAGGTCACGCAGCCGCACATaGTTCCACAGGACCGCTGCC +
Preference number: 4 (lower is better)
Translates to: ILCFLLSSSSSLLRNFSRSRSRT*FHRTAA
Trigger: GGCAGCGGTCCTGTGGAAGCATGTGCGGCTGCGTGA...CCTGGAGAAGTTCCTTAGCAGGGAGGAGGAAGAGGAGAGGAGGAAGCAAAGAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR GCA 90 bp CTCCCTGCTAAGGAACTTCTCCAGGGGTACAAATGTTCAGGATGGGAGAAGGGGGTAGTCGATCCTCAGTaGTGGGGCTGGCTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: LPAKELLQGYKCSGWEKGVVDPQ*WGWLCG
Trigger: GCCACAGAGCCAGCCCCAGCACTGAGGATCGACTAC...CCCCTTCTCCCATCCTGAACATTTGTACCCCTGGAGAAGTTCCTTAGCAGGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR GCA 90 bp TCCCTGCTAAGGAACTTCTCCAGGGGTACAAATGTTCAGGATGGGAGAAGGGGATGCGGTCTGTGTGCGTaGGGCCCGTGCACACCATGT +
Preference number: 4 (lower is better)
Translates to: SLLRNFSRGTNVQDGRRGCGLCA*GPCTPC
Trigger: ACATGGTGTGCACGGGCCGCACGCACACAGACCGCA...TCCCCTTCTCCCATCCTGAACATTTGTACCCCTGGAGAAGTTCCTTAGCAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR GCA 90 bp ATTCTTTGCTTCCTCCTCTCCTCTTCCTCCTCCCTGCTAAGGAACTTCTCCAGGGTAGAGGTCGAAGTGTaGACCCTCGCCCCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: ILCFLLSSSSSLLRNFSRVEVEV*TLAPAL
Trigger: GAGGGCTGGGGCGAGGGTGCACACTTCGACCTCTAC...CCTGGAGAAGTTCCTTAGCAGGGAGGAGGAAGAGGAGAGGAGGAAGCAAAGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR GCA 90 bp CTCCCTGCTAAGGAACTTCTCCAGGGGTACAAATGTTCAGGATGGGAGAAGGGGACCAGCTGGGCCCCATaGATGCTGACCAGCATGGAG +
Preference number: 4 (lower is better)
Translates to: LPAKELLQGYKCSGWEKGTSWAP*MLTSME
Trigger: CTCCATGCTGGTCAGCATGCATGGGGCCCAGCTGGT...CCCCTTCTCCCATCCTGAACATTTGTACCCCTGGAGAAGTTCCTTAGCAGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR CCA 90 bp TCCTCCCTGCTAAGGAACTTCTCCAGGGGTACAAATGTTCAGGATGGGAGAAGGGTCGATCCTCAGTGCTaGGGCTGGCTCTGTGGCCTG +
Preference number: 4 (lower is better)
Translates to: SSLLRNFSRGTNVQDGRRVDPQC*GWLCGL
Trigger: CAGGCCACAGAGCCAGCCCCAGCACTGAGGATCGAC...CCTTCTCCCATCCTGAACATTTGTACCCCTGGAGAAGTTCCTTAGCAGGGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR CCA 90 bp TCCCTGCTAAGGAACTTCTCCAGGGGTACAAATGTTCAGGATGGGAGAAGGGGAAGGGTGGTGACCAGCTaGGCCCCATGCATGCTGACC +
Preference number: 4 (lower is better)
Translates to: SLLRNFSRGTNVQDGRRGRVVTS*APCMLT
Trigger: GGTCAGCATGCATGGGGCCCAGCTGGTCACCACCCT...TCCCCTTCTCCCATCCTGAACATTTGTACCCCTGGAGAAGTTCCTTAGCAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR CCA 90 bp GGATGGGAGAAGGGGAAGTCAGGTCCCTTATCTCTAGGGCAAAGAGGAGTGCTGGCAACAGAGATGCCGTaGGACCTCACGGCTTTGCAG +
Preference number: 4 (lower is better)
Translates to: GWEKGKSGPLSLGQRGVLATEMP*DLTALQ
Trigger: CTGCAAAGCCGTGAGGTCCCACGGCATCTCTGTTGC...CAGCACTCCTCTTTGCCCTAGAGATAAGGGACCTGACTTCCCCTTCTCCCATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR CCA 90 bp ACAGTGGGATTAATGGGCCCAGGGACGCTGAACTGCAGGAGCCACCTTCCCGAGGACAACAAGATGATGTaGAGGCACAGGCCTGCTCAA +
Preference number: 4 (lower is better)
Translates to: TVGLMGPGTLNCRSHLPEDNKMM*RHRPAQ
Trigger: TTGAGCAGGCCTGTGCCTCCACATCATCTTGTTGTC...CTCGGGAAGGTGGCTCCTGCAGTTCAGCGTCCCTGGGCCCATTAATCCCACTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR TCA 90 bp TTCACTGGGATGGAAGCAGATGAACCACCCAATCAAACAGTACATGATTACTCGGGAGGCGCCATGCACTaGCGCCTGGCACCGTGCCTC +
Preference number: 4 (lower is better)
Translates to: FTGMEADEPPNQTVHDYSGGAMH*RLAPCL
Trigger: GAGGCACGGTGCCAGGCGTCAGTGCATGGCGCCTCC...CGAGTAATCATGTACTGTTTGATTGGGTGGTTCATCTGCTTCCATCCCAGTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR TCA 90 bp GGATGGGAGAAGGGGAAGTCAGGTCCCTTATCTCTAGGGCAAAGAGGAGTGCTGCCAGGAGGATCTTGTTaGAGATGCAGCGGACCCACA +
Preference number: 4 (lower is better)
Translates to: GWEKGKSGPLSLGQRGVLPGGSC*RCSGPT
Trigger: TGTGGGTCCGCTGCATCTTCAACAAGATCCTCCTGG...CAGCACTCCTCTTTGCCCTAGAGATAAGGGACCTGACTTCCCCTTCTCCCATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR TCA 90 bp CACAGTGGGATTAATGGGCCCAGGGACGCTGAACTGCAGGAGCCACCTTCCCGATGGGATGGAAGCAGATaGACCACCCAATCAAACAGT +
Preference number: 4 (lower is better)
Translates to: HSGINGPRDAELQEPPSRWDGSR*TTQSNS
Trigger: ACTGTTTGATTGGGTGGTTCATCTGCTTCCATCCCA...TCGGGAAGGTGGCTCCTGCAGTTCAGCGTCCCTGGGCCCATTAATCCCACTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR TCA 90 bp CACAGTGGGATTAATGGGCCCAGGGACGCTGAACTGCAGGAGCCACCTTCCCGATGGAGTTCCGACATCTaGTCTCTAGGAGGAAAGAAG +
Preference number: 4 (lower is better)
Translates to: HSGINGPRDAELQEPPSRWSSDI*SLGGKK
Trigger: CTTCTTTCCTCCTAGAGATCAGATGTCGGAACTCCA...TCGGGAAGGTGGCTCCTGCAGTTCAGCGTCCCTGGGCCCATTAATCCCACTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441964.1
CDS-3UTR GCA 90 bp TCCTCCCTGCTAAGGAACTTCTCCAGGGGTACAAATGTTCAGGATGGGAGAAGGGAGCTCTACCACAGTTaGCCCACGGGGCAGGAAGAG +
Preference number: 4 (lower is better)
Translates to: SSLLRNFSRGTNVQDGRRELYHS*PTGQEE
Trigger: CTCTTCCTGCCCCGTGGGGCAACTGTGGTAGAGCTC...CCTTCTCCCATCCTGAACATTTGTACCCCTGGAGAAGTTCCTTAGCAGGGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR GCA 90 bp ATTCTTTGCTTCCTCCTCTCCTCTTCCTCCTCCCTGCTAAGGAACTTCTCCAGGTGCAGGATACGGGCTTaGTCAGCCCGGTCCAGATGG +
Preference number: 4 (lower is better)
Translates to: ILCFLLSSSSSLLRNFSRCRIRA*SARSRW
Trigger: CCATCTGGACCGGGCTGAGCAAGCCCGTATCCTGCA...CCTGGAGAAGTTCCTTAGCAGGGAGGAGGAAGAGGAGAGGAGGAAGCAAAGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR GCA 90 bp CTCCTCCCTGCTAAGGAACTTCTCCAGGGGTACAAATGTTCAGGATGGGAGAAGGTGCCTCCCGCACCTTaGCTGGATATAGGCCGACTG +
Preference number: 4 (lower is better)
Translates to: LLPAKELLQGYKCSGWEKVPPAP*LDIGRL
Trigger: CAGTCGGCCTATATCCAGGCAAGGTGCGGGAGGCAC...CTTCTCCCATCCTGAACATTTGTACCCCTGGAGAAGTTCCTTAGCAGGGAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR GCA 90 bp CTTTGCTTCCTCCTCTCCTCTTCCTCCTCCCTGCTAAGGAACTTCTCCAGGGGTGCACACCAGCACATCTaGAAAGGGTCCCAGGAGGAT +
Preference number: 4 (lower is better)
Translates to: LCFLLSSSSSLLRNFSRGAHQHI*KGSQED
Trigger: ATCCTCCTGGGACCCTTTGCAGATGTGCTGGTGTGC...ACCCCTGGAGAAGTTCCTTAGCAGGGAGGAGGAAGAGGAGAGGAGGAAGCAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR CCA 90 bp CTCCTCCCTGCTAAGGAACTTCTCCAGGGGTACAAATGTTCAGGATGGGAGAAGTTGGCCTTCGGGCCCTaGGGCTGCACAAAGCCATAC +
Preference number: 4 (lower is better)
Translates to: LLPAKELLQGYKCSGWEKLAFGP*GCTKPY
Trigger: GTATGGCTTTGTGCAGCCCCAGGGCCCGAAGGCCAA...CTTCTCCCATCCTGAACATTTGTACCCCTGGAGAAGTTCCTTAGCAGGGAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR CCA 90 bp TCCTCCCTGCTAAGGAACTTCTCCAGGGGTACAAATGTTCAGGATGGGAGAAGGTTGGCCTTCGGGCCCTaGGGCTGCACAAAGCCATAC +
Preference number: 4 (lower is better)
Translates to: SSLLRNFSRGTNVQDGRRLAFGP*GCTKPY
Trigger: GTATGGCTTTGTGCAGCCCCAGGGCCCGAAGGCCAA...CCTTCTCCCATCCTGAACATTTGTACCCCTGGAGAAGTTCCTTAGCAGGGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR TCA 90 bp CTCCCTGCTAAGGAACTTCTCCAGGGGTACAAATGTTCAGGATGGGAGAAGGGGGCCGTATGGTTTGAATaGGGGACGGGATGTCCACCT +
Preference number: 4 (lower is better)
Translates to: LPAKELLQGYKCSGWEKGAVWFE*GTGCPP
Trigger: AGGTGGACATCCCGTCCCTCATTCAAACCATACGGC...CCCCTTCTCCCATCCTGAACATTTGTACCCCTGGAGAAGTTCCTTAGCAGGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR TCA 90 bp TCCCTGCTAAGGAACTTCTCCAGGGGTACAAATGTTCAGGATGGGAGAAGGGGAACGCGCCGTATGGTTTaGATGAGGGACGGGATGTCC +
Preference number: 4 (lower is better)
Translates to: SLLRNFSRGTNVQDGRRGTRRMV*MRDGMS
Trigger: GGACATCCCGTCCCTCATTCAAACCATACGGCGCGT...TCCCCTTCTCCCATCCTGAACATTTGTACCCCTGGAGAAGTTCCTTAGCAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR GCA 90 bp TCCCTGCTAAGGAACTTCTCCAGGGGTACAAATGTTCAGGATGGGAGAAGGGGATTCGGGCCCTGGGGCTaGACAAAGCCATACTGGTAC +
Preference number: 4 (lower is better)
Translates to: SLLRNFSRGTNVQDGRRGFGPWG*TKPYWY
Trigger: GTACCAGTATGGCTTTGTGCAGCCCCAGGGCCCGAA...TCCCCTTCTCCCATCCTGAACATTTGTACCCCTGGAGAAGTTCCTTAGCAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR GCA 90 bp TCCCTGCTAAGGAACTTCTCCAGGGGTACAAATGTTCAGGATGGGAGAAGGGGATTCTCCCCCTGCTCCTaGAGCCACACCTCGTACTTC +
Preference number: 4 (lower is better)
Translates to: SLLRNFSRGTNVQDGRRGFSPCS*SHTSYF
Trigger: GAAGTACGAGGTGTGGCTGCAGGAGCAGGGGGAGAA...TCCCCTTCTCCCATCCTGAACATTTGTACCCCTGGAGAAGTTCCTTAGCAGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR CCA 90 bp ATTCTTTGCTTCCTCCTCTCCTCTTCCTCCTCCCTGCTAAGGAACTTCTCCAGGAGGCCCACAAAAGCATaGGAGAAGCACAGCAGCCGG +
Preference number: 4 (lower is better)
Translates to: ILCFLLSSSSSLLRNFSRRPTKA*EKHSSR
Trigger: CCGGCTGCTGTGCTTCTCCCATGCTTTTGTGGGCCT...CCTGGAGAAGTTCCTTAGCAGGGAGGAGGAAGAGGAGAGGAGGAAGCAAAGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR CCA 90 bp ACAGTGGGATTAATGGGCCCAGGGACGCTGAACTGCAGGAGCCACCTTCCCGAGTGCACAAAGCCATACTaGTACCAGGTAGTGATCTTG +
Preference number: 4 (lower is better)
Translates to: TVGLMGPGTLNCRSHLPECTKPY*YQVVIL
Trigger: CAAGATCACTACCTGGTACCAGTATGGCTTTGTGCA...CTCGGGAAGGTGGCTCCTGCAGTTCAGCGTCCCTGGGCCCATTAATCCCACTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR CCA 90 bp CTCCTCCCTGCTAAGGAACTTCTCCAGGGGTACAAATGTTCAGGATGGGAGAAGTTCATCTGGAACTCCTaGGCCAGTGCCAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LLPAKELLQGYKCSGWEKFIWNS*ASASSS
Trigger: GCTGCTGCTGGCACTGGCCCAGGAGTTCCAGATGAA...CTTCTCCCATCCTGAACATTTGTACCCCTGGAGAAGTTCCTTAGCAGGGAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR CCA 90 bp ATTCTTTGCTTCCTCCTCTCCTCTTCCTCCTCCCTGCTAAGGAACTTCTCCAGGCCATGCCAGGCAGCATaGCCAGCGTCTTATAGGGAG +
Preference number: 4 (lower is better)
Translates to: ILCFLLSSSSSLLRNFSRPCQAA*PASYRE
Trigger: CTCCCTATAAGACGCTGGCCATGCTGCCTGGCATGG...CCTGGAGAAGTTCCTTAGCAGGGAGGAGGAAGAGGAGAGGAGGAAGCAAAGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR CCA 90 bp TCCTCCCTGCTAAGGAACTTCTCCAGGGGTACAAATGTTCAGGATGGGAGAAGGGCAACAGAGATGCCGTaGGACCTCACGGCTTTGCAG +
Preference number: 4 (lower is better)
Translates to: SSLLRNFSRGTNVQDGRRATEMP*DLTALQ
Trigger: CTGCAAAGCCGTGAGGTCCCACGGCATCTCTGTTGC...CCTTCTCCCATCCTGAACATTTGTACCCCTGGAGAAGTTCCTTAGCAGGGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR CCA 90 bp TTCACTGGGATGGAAGCAGATGAACCACCCAATCAAACAGTACATGATTACTCGCTGCTTCCGTGGTCCTaGCCGGCCCTTCACCACGCG +
Preference number: 4 (lower is better)
Translates to: FTGMEADEPPNQTVHDYSLLPWS*PALHHA
Trigger: CGCGTGGTGAAGGGCCGGCCAGGACCACGGAAGCAG...CGAGTAATCATGTACTGTTTGATTGGGTGGTTCATCTGCTTCCATCCCAGTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR TCA 90 bp CTCCCTGCTAAGGAACTTCTCCAGGGGTACAAATGTTCAGGATGGGAGAAGGGGTGCCATGGAAGAAGATaGACTCCTCAGCCTCGTTGG +
Preference number: 4 (lower is better)
Translates to: LPAKELLQGYKCSGWEKGCHGRR*TPQPRW
Trigger: CCAACGAGGCTGAGGAGTTCATCTTCTTCCATGGCA...CCCCTTCTCCCATCCTGAACATTTGTACCCCTGGAGAAGTTCCTTAGCAGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR TCA 90 bp GGATGGGAGAAGGGGAAGTCAGGTCCCTTATCTCTAGGGCAAAGAGGAGTGCTGACGAAGTTGAAGTACTaGGTGTTGTGGTCCTCCACG +
Preference number: 4 (lower is better)
Translates to: GWEKGKSGPLSLGQRGVLTKLKY*VLWSST
Trigger: CGTGGAGGACCACAACACTCAGTACTTCAACTTCGT...CAGCACTCCTCTTTGCCCTAGAGATAAGGGACCTGACTTCCCCTTCTCCCATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR TCA 90 bp TCCCTGCTAAGGAACTTCTCCAGGGGTACAAATGTTCAGGATGGGAGAAGGGGAGCCGTATGGTTTGAATaGGGGACGGGATGTCCACCT +
Preference number: 4 (lower is better)
Translates to: SLLRNFSRGTNVQDGRRGAVWFE*GTGCPP
Trigger: AGGTGGACATCCCGTCCCTCATTCAAACCATACGGC...TCCCCTTCTCCCATCCTGAACATTTGTACCCCTGGAGAAGTTCCTTAGCAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR GCA 90 bp TCCCTGCTAAGGAACTTCTCCAGGGGTACAAATGTTCAGGATGGGAGAAGGGGAAACACCGCCGAGAGGTaGATCCTAATGCCACTGTGG +
Preference number: 4 (lower is better)
Translates to: SLLRNFSRGTNVQDGRRGNTAER*ILMPLW
Trigger: CCACAGTGGCATTAGGATGCACCTCTCGGCGGTGTT...TCCCCTTCTCCCATCCTGAACATTTGTACCCCTGGAGAAGTTCCTTAGCAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR GCA 90 bp CTCCCTGCTAAGGAACTTCTCCAGGGGTACAAATGTTCAGGATGGGAGAAGGGGCATCAGGATCTGCAGTaGCTTCGGGTAGTCGATCCT +
Preference number: 4 (lower is better)
Translates to: LPAKELLQGYKCSGWEKGHQDLQ*LRVVDP
Trigger: AGGATCGACTACCCGAAGGCACTGCAGATCCTGATG...CCCCTTCTCCCATCCTGAACATTTGTACCCCTGGAGAAGTTCCTTAGCAGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR GCA 90 bp CTCCTCCCTGCTAAGGAACTTCTCCAGGGGTACAAATGTTCAGGATGGGAGAAGTGCACACCATGTGTGTaGCGCCCTCCATCAGGATCT +
Preference number: 4 (lower is better)
Translates to: LLPAKELLQGYKCSGWEKCTPCV*RPPSGS
Trigger: AGATCCTGATGGAGGGCGGCACACACATGGTGTGCA...CTTCTCCCATCCTGAACATTTGTACCCCTGGAGAAGTTCCTTAGCAGGGAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR GCA 90 bp CTGGGATGGAAGCAGATGAACCACCCAATCAAACAGTACATGATTACTCGGTTTTGTGCGTGCGGCCCGTaGACACCATGTGTGTGCCGC +
Preference number: 4 (lower is better)
Translates to: LGWKQMNHPIKQYMITRFCACGP*TPCVCR
Trigger: GCGGCACACACATGGTGTGCACGGGCCGCACGCACA...AAACCGAGTAATCATGTACTGTTTGATTGGGTGGTTCATCTGCTTCCATCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR GCA 90 bp CTGGGATGGAAGCAGATGAACCACCCAATCAAACAGTACATGATTACTCGGTTTCAGATGCGGTCTGTGTaGGTGCGGCCCGTGCACACC +
Preference number: 4 (lower is better)
Translates to: LGWKQMNHPIKQYMITRFQMRSV*VRPVHT
Trigger: GGTGTGCACGGGCCGCACGCACACAGACCGCATCTG...AAACCGAGTAATCATGTACTGTTTGATTGGGTGGTTCATCTGCTTCCATCCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR GCA 90 bp CTCCTCCCTGCTAAGGAACTTCTCCAGGGGTACAAATGTTCAGGATGGGAGAAGGCACACCAGCACATCTaGAAAGGGTCCCAGGAGGAT +
Preference number: 4 (lower is better)
Translates to: LLPAKELLQGYKCSGWEKAHQHI*KGSQED
Trigger: ATCCTCCTGGGACCCTTTGCAGATGTGCTGGTGTGC...CTTCTCCCATCCTGAACATTTGTACCCCTGGAGAAGTTCCTTAGCAGGGAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR GCA 90 bp TCCCTGCTAAGGAACTTCTCCAGGGGTACAAATGTTCAGGATGGGAGAAGGGGAGTGCCCAGTAAGACATaGCCTCAGCTGGAGTTCCGA +
Preference number: 4 (lower is better)
Translates to: SLLRNFSRGTNVQDGRRGVPSKT*PQLEFR
Trigger: TCGGAACTCCAGCTGAGGGCATGTCTTACTGGGCAC...TCCCCTTCTCCCATCCTGAACATTTGTACCCCTGGAGAAGTTCCTTAGCAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441964.1
CDS-3UTR CCA 90 bp GGATGGGAGAAGGGGAAGTCAGGTCCCTTATCTCTAGGGCAAAGAGGAGTGCTGCAGGGTGTAGAAGAGTaGCAGCAGGTCGTCATGAAA +
Preference number: 4 (lower is better)
Translates to: GWEKGKSGPLSLGQRGVLQGVEE*QQVVMK
Trigger: TTTCATGACGACCTGCTGCCACTCTTCTACACCCTG...CAGCACTCCTCTTTGCCCTAGAGATAAGGGACCTGACTTCCCCTTCTCCCATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR CCA 90 bp GCAGATGAACCACCCAATCAAACAGTACATGATTACTCGGTTTCCAGAAATCTGCTGCTTCCGTGGTCCTaGCCGGCCCTTCACCACGCG +
Preference number: 4 (lower is better)
Translates to: ADEPPNQTVHDYSVSRNLLLPWS*PALHHA
Trigger: CGCGTGGTGAAGGGCCGGCCAGGACCACGGAAGCAG...CAGATTTCTGGAAACCGAGTAATCATGTACTGTTTGATTGGGTGGTTCATCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR TCA 90 bp CCACCCAATCAAACAGTACATGATTACTCGGTTTCCAGAAATCTGGATACCAGAACACCGGCTTGGGCATaGAGCGCAGGGCAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: PPNQTVHDYSVSRNLDTRTPAWA*SAGQQQ
Trigger: CTGCTGCTGCCCTGCGCTTCATGCCCAAGCCGGTGT...TCTGGTATCCAGATTTCTGGAAACCGAGTAATCATGTACTGTTTGATTGGGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR TCA 90 bp CTCCCTGCTAAGGAACTTCTCCAGGGGTACAAATGTTCAGGATGGGAGAAGGGGTCAGCTTTTCTGTCATaGACCGTGCAAACTGCCGGA +
Preference number: 4 (lower is better)
Translates to: LPAKELLQGYKCSGWEKGSAFLS*TVQTAG
Trigger: TCCGGCAGTTTGCACGGTTCATGACAGAAAAGCTGA...CCCCTTCTCCCATCCTGAACATTTGTACCCCTGGAGAAGTTCCTTAGCAGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR TCA 90 bp TCCCTGCTAAGGAACTTCTCCAGGGGTACAAATGTTCAGGATGGGAGAAGGGGACTGCCTCATTCAGAATaGGTCTGTTCTGGGTTCGGC +
Preference number: 4 (lower is better)
Translates to: SLLRNFSRGTNVQDGRRGLPHSE*VCSGFG
Trigger: GCCGAACCCAGAACAGACTCATTCTGAATGAGGCAG...TCCCCTTCTCCCATCCTGAACATTTGTACCCCTGGAGAAGTTCCTTAGCAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR TCA 90 bp CTCCTCCCTGCTAAGGAACTTCTCCAGGGGTACAAATGTTCAGGATGGGAGAAGCTGCCTCATTCAGAATaGGTCTGTTCTGGGTTCGGC +
Preference number: 4 (lower is better)
Translates to: LLPAKELLQGYKCSGWEKLPHSE*VCSGFG
Trigger: GCCGAACCCAGAACAGACTCATTCTGAATGAGGCAG...CTTCTCCCATCCTGAACATTTGTACCCCTGGAGAAGTTCCTTAGCAGGGAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR TCA 90 bp TTCACTGGGATGGAAGCAGATGAACCACCCAATCAAACAGTACATGATTACTCGGGGCCCCATGCATGCTaGCCAGCATGGAGGCATTGC +
Preference number: 4 (lower is better)
Translates to: FTGMEADEPPNQTVHDYSGPHAC*PAWRHC
Trigger: GCAATGCCTCCATGCTGGTCAGCATGCATGGGGCCC...CGAGTAATCATGTACTGTTTGATTGGGTGGTTCATCTGCTTCCATCCCAGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR GCA 90 bp ATTCTTTGCTTCCTCCTCTCCTCTTCCTCCTCCCTGCTAAGGAACTTCTCCAGGCATCAGGATCTGCAGTaGCTTCGGGTAGTCGATCCT +
Preference number: 4 (lower is better)
Translates to: ILCFLLSSSSSLLRNFSRHQDLQ*LRVVDP
Trigger: AGGATCGACTACCCGAAGGCACTGCAGATCCTGATG...CCTGGAGAAGTTCCTTAGCAGGGAGGAGGAAGAGGAGAGGAGGAAGCAAAGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR GCA 90 bp TTCACTGGGATGGAAGCAGATGAACCACCCAATCAAACAGTACATGATTACTCGTGCGGTCTGTGTGCGTaGGGCCCGTGCACACCATGT +
Preference number: 4 (lower is better)
Translates to: FTGMEADEPPNQTVHDYSCGLCA*GPCTPC
Trigger: ACATGGTGTGCACGGGCCGCACGCACACAGACCGCA...CGAGTAATCATGTACTGTTTGATTGGGTGGTTCATCTGCTTCCATCCCAGTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR GCA 90 bp CTGGGATGGAAGCAGATGAACCACCCAATCAAACAGTACATGATTACTCGGTTTGTAGAGGTCGAAGTGTaGACCCTCGCCCCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: LGWKQMNHPIKQYMITRFVEVEV*TLAPAL
Trigger: GAGGGCTGGGGCGAGGGTGCACACTTCGACCTCTAC...AAACCGAGTAATCATGTACTGTTTGATTGGGTGGTTCATCTGCTTCCATCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR GCA 90 bp TCCCTGCTAAGGAACTTCTCCAGGGGTACAAATGTTCAGGATGGGAGAAGGGGAACTGCCGGATCTCATTaGCTGAGACGAGGATGTTGG +
Preference number: 4 (lower is better)
Translates to: SLLRNFSRGTNVQDGRRGTAGSH*LRRGCW
Trigger: CCAACATCCTCGTCTCAGGCAATGAGATCCGGCAGT...TCCCCTTCTCCCATCCTGAACATTTGTACCCCTGGAGAAGTTCCTTAGCAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR CCA 90 bp TCCTCCCTGCTAAGGAACTTCTCCAGGGGTACAAATGTTCAGGATGGGAGAAGGTGTGACTGTGTTCTCTaGCATCATGTTCCGCCAGGC +
Preference number: 4 (lower is better)
Translates to: SSLLRNFSRGTNVQDGRRCDCVL*HHVPPG
Trigger: GCCTGGCGGAACATGATGCCAGAGAACACAGTCACA...CCTTCTCCCATCCTGAACATTTGTACCCCTGGAGAAGTTCCTTAGCAGGGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR CCA 90 bp CTCCTCCCTGCTAAGGAACTTCTCCAGGGGTACAAATGTTCAGGATGGGAGAAGTGTGACTGTGTTCTCTaGCATCATGTTCCGCCAGGC +
Preference number: 4 (lower is better)
Translates to: LLPAKELLQGYKCSGWEKCDCVL*HHVPPG
Trigger: GCCTGGCGGAACATGATGCCAGAGAACACAGTCACA...CTTCTCCCATCCTGAACATTTGTACCCCTGGAGAAGTTCCTTAGCAGGGAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR CCA 90 bp CTCCTCCCTGCTAAGGAACTTCTCCAGGGGTACAAATGTTCAGGATGGGAGAAGACGGGATGTCCACCTTaGTGTCCTGGTAGATTCGGA +
Preference number: 4 (lower is better)
Translates to: LLPAKELLQGYKCSGWEKTGCPP*CPGRFG
Trigger: TCCGAATCTACCAGGACACCAAGGTGGACATCCCGT...CTTCTCCCATCCTGAACATTTGTACCCCTGGAGAAGTTCCTTAGCAGGGAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR TCA 90 bp CCAATCAAACAGTACATGATTACTCGGTTTCCAGAAATCTGGATACCAGAAAAAGGAGGCGCCATGCACTaGCGCCTGGCACCGTGCCTC +
Preference number: 4 (lower is better)
Translates to: PIKQYMITRFPEIWIPEKGGAMH*RLAPCL
Trigger: GAGGCACGGTGCCAGGCGTCAGTGCATGGCGCCTCC...TTTTTCTGGTATCCAGATTTCTGGAAACCGAGTAATCATGTACTGTTTGATTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR GCA 90 bp CCACCCAATCAAACAGTACATGATTACTCGGTTTCCAGAAATCTGGATACCAGATCACGCAGCCGCACATaGTTCCACAGGACCGCTGCC +
Preference number: 4 (lower is better)
Translates to: PPNQTVHDYSVSRNLDTRSRSRT*FHRTAA
Trigger: GGCAGCGGTCCTGTGGAAGCATGTGCGGCTGCGTGA...TCTGGTATCCAGATTTCTGGAAACCGAGTAATCATGTACTGTTTGATTGGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR GCA 90 bp CAGTACATGATTACTCGGTTTCCAGAAATCTGGATACCAGAAAAACTCAGTAGGTGTGCGTGCGGCCCGTaGACACCATGTGTGTGCCGC +
Preference number: 4 (lower is better)
Translates to: QYMITRFPEIWIPEKLSRCACGP*TPCVCR
Trigger: GCGGCACACACATGGTGTGCACGGGCCGCACGCACA...CCTACTGAGTTTTTCTGGTATCCAGATTTCTGGAAACCGAGTAATCATGTACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR GCA 90 bp ATTTCACTGGGATGGAAGCAGATGAACCACCCAATCAAACAGTACATGATTACTCATGAAGAAGAGCCGTaGCTCGTGGGCCAGGCCGGG +
Preference number: 4 (lower is better)
Translates to: ISLGWKQMNHPIKQYMITHEEEP*LVGQAG
Trigger: CCCGGCCTGGCCCACGAGGCACGGCTCTTCTTCATG...AGTAATCATGTACTGTTTGATTGGGTGGTTCATCTGCTTCCATCCCAGTGAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR GCA 90 bp ATTCTTTGCTTCCTCCTCTCCTCTTCCTCCTCCCTGCTAAGGAACTTCTCCAGGATGAACCGTGCAAACTaGCGGATCTCATTGCCTGAG +
Preference number: 4 (lower is better)
Translates to: ILCFLLSSSSSLLRNFSRMNRAN*RISLPE
Trigger: CTCAGGCAATGAGATCCGGCAGTTTGCACGGTTCAT...CCTGGAGAAGTTCCTTAGCAGGGAGGAGGAAGAGGAGAGGAGGAAGCAAAGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR GCA 90 bp GGATGGGAGAAGGGGAAGTCAGGTCCCTTATCTCTAGGGCAAAGAGGAGTGCTGTTCTGTCATGAACCGTaGAAACTGCCGGATCTCATT +
Preference number: 4 (lower is better)
Translates to: GWEKGKSGPLSLGQRGVLFCHEP*KLPDLI
Trigger: AATGAGATCCGGCAGTTTGCACGGTTCATGACAGAA...CAGCACTCCTCTTTGCCCTAGAGATAAGGGACCTGACTTCCCCTTCTCCCATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR GCA 90 bp CTGGGATGGAAGCAGATGAACCACCCAATCAAACAGTACATGATTACTCGGTTTTGCAGGATACGGGCTTaGTCAGCCCGGTCCAGATGG +
Preference number: 4 (lower is better)
Translates to: LGWKQMNHPIKQYMITRFCRIRA*SARSRW
Trigger: CCATCTGGACCGGGCTGAGCAAGCCCGTATCCTGCA...AAACCGAGTAATCATGTACTGTTTGATTGGGTGGTTCATCTGCTTCCATCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR CCA 90 bp GCAGATGAACCACCCAATCAAACAGTACATGATTACTCGGTTTCCAGAAATCTGGATGAGGGCCACGTCTaGCACGAACACCGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: ADEPPNQTVHDYSVSRNLDEGHV*HEHRLG
Trigger: CCCAAGCCGGTGTTCGTGCCAGACGTGGCCCTCATC...CAGATTTCTGGAAACCGAGTAATCATGTACTGTTTGATTGGGTGGTTCATCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR CCA 90 bp CTCCTCCCTGCTAAGGAACTTCTCCAGGGGTACAAATGTTCAGGATGGGAGAAGCAGGGTGTAGAAGAGTaGCAGCAGGTCGTCATGAAA +
Preference number: 4 (lower is better)
Translates to: LLPAKELLQGYKCSGWEKQGVEE*QQVVMK
Trigger: TTTCATGACGACCTGCTGCCACTCTTCTACACCCTG...CTTCTCCCATCCTGAACATTTGTACCCCTGGAGAAGTTCCTTAGCAGGGAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR CCA 90 bp AAGCAGATGAACCACCCAATCAAACAGTACATGATTACTCGGTTTCCAGAAATCAAGAGCCGTGCCTCGTaGGCCAGGCCGGGAAACTGC +
Preference number: 4 (lower is better)
Translates to: KQMNHPIKQYMITRFPEIKSRAS*ARPGNC
Trigger: GCAGTTTCCCGGCCTGGCCCACGAGGCACGGCTCTT...GATTTCTGGAAACCGAGTAATCATGTACTGTTTGATTGGGTGGTTCATCTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR CCA 90 bp CTCCCTGCTAAGGAACTTCTCCAGGGGTACAAATGTTCAGGATGGGAGAAGGGGGGGATTGACAGCATATaGGAAGAGCTCTACCACAGT +
Preference number: 4 (lower is better)
Translates to: LPAKELLQGYKCSGWEKGGIDSI*EELYHS
Trigger: ACTGTGGTAGAGCTCTTCCCATATGCTGTCAATCCC...CCCCTTCTCCCATCCTGAACATTTGTACCCCTGGAGAAGTTCCTTAGCAGGGAG
51% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR CCA 90 bp TCCCTGCTAAGGAACTTCTCCAGGGGTACAAATGTTCAGGATGGGAGAAGGGGAGACAACAAGATGATGTaGAGGCACAGGCCTGCTCAA +
Preference number: 4 (lower is better)
Translates to: SLLRNFSRGTNVQDGRRGDNKMM*RHRPAQ
Trigger: TTGAGCAGGCCTGTGCCTCCACATCATCTTGTTGTC...TCCCCTTCTCCCATCCTGAACATTTGTACCCCTGGAGAAGTTCCTTAGCAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR CCA 90 bp CTCCCTGCTAAGGAACTTCTCCAGGGGTACAAATGTTCAGGATGGGAGAAGGGGGCCTTACCACCACCATaGTATGGACAGTTCTTCTCA +
Preference number: 4 (lower is better)
Translates to: LPAKELLQGYKCSGWEKGALPPP*YGQFFS
Trigger: TGAGAAGAACTGTCCATACCATGGTGGTGGTAAGGC...CCCCTTCTCCCATCCTGAACATTTGTACCCCTGGAGAAGTTCCTTAGCAGGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441964.1
CDS-3UTR TCA 90 bp TACATGATTACTCGGTTTCCAGAAATCTGGATACCAGAAAAACTCAGTAGGAAACTGTGGCCTGTCGGCTaGGGGCCAGCTCCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: YMITRFPEIWIPEKLSRKLWPVG*GPAPPP
Trigger: TGGAGGAGGAGCTGGCCCTCAGCCGACAGGCCACAG...TTTCCTACTGAGTTTTTCTGGTATCCAGATTTCTGGAAACCGAGTAATCATGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR TCA 90 bp GCAGATGAACCACCCAATCAAACAGTACATGATTACTCGGTTTCCAGAAATCTGGAGGCTGCTTGGGGCTaGGCAGCTTGTAGAGGTCGA +
Preference number: 4 (lower is better)
Translates to: ADEPPNQTVHDYSVSRNLEAAWG*AACRGR
Trigger: TCGACCTCTACAAGCTGCTCAGCCCCAAGCAGCCTC...CAGATTTCTGGAAACCGAGTAATCATGTACTGTTTGATTGGGTGGTTCATCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR TCA 90 bp CTGGGATGGAAGCAGATGAACCACCCAATCAAACAGTACATGATTACTCGGTTTGCCGCTCAGGGTGTGTaGCTGTGTTCTCTGGCATCA +
Preference number: 4 (lower is better)
Translates to: LGWKQMNHPIKQYMITRFAAQGV*LCSLAS
Trigger: TGATGCCAGAGAACACAGTCACACACCCTGAGCGGC...AAACCGAGTAATCATGTACTGTTTGATTGGGTGGTTCATCTGCTTCCATCCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR GCA 90 bp CTGGGATGGAAGCAGATGAACCACCCAATCAAACAGTACATGATTACTCGGTTTTTCCGGCAACAGAGATaGCGTGGGACCTCACGGCTT +
Preference number: 4 (lower is better)
Translates to: LGWKQMNHPIKQYMITRFFRQQR*RGTSRL
Trigger: AAGCCGTGAGGTCCCACGGCATCTCTGTTGCCGGAA...AAACCGAGTAATCATGTACTGTTTGATTGGGTGGTTCATCTGCTTCCATCCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR GCA 90 bp CAGTACATGATTACTCGGTTTCCAGAAATCTGGATACCAGAAAAACTCAGTAGGCCGACTGTCCACTTCTaGTTCCGTGGTCCTGGCCGG +
Preference number: 4 (lower is better)
Translates to: QYMITRFPEIWIPEKLSRPTVHF*FRGPGR
Trigger: CCGGCCAGGACCACGGAAGCAGAAGTGGACAGTCGG...CCTACTGAGTTTTTCTGGTATCCAGATTTCTGGAAACCGAGTAATCATGTACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR GCA 90 bp TTCACTGGGATGGAAGCAGATGAACCACCCAATCAAACAGTACATGATTACTCGTTCTCCCCCTGCTCCTaGAGCCACACCTCGTACTTC +
Preference number: 4 (lower is better)
Translates to: FTGMEADEPPNQTVHDYSFSPCS*SHTSYF
Trigger: GAAGTACGAGGTGTGGCTGCAGGAGCAGGGGGAGAA...CGAGTAATCATGTACTGTTTGATTGGGTGGTTCATCTGCTTCCATCCCAGTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR GCA 90 bp ATTTCACTGGGATGGAAGCAGATGAACCACCCAATCAAACAGTACATGATTACTGGCCAGGCTGTGGCCTaGTCGCTACGTGTTGCACAC +
Preference number: 4 (lower is better)
Translates to: ISLGWKQMNHPIKQYMITGQAVA*SLRVAH
Trigger: GTGTGCAACACGTAGCGAGCAGGCCACAGCCTGGCC...AGTAATCATGTACTGTTTGATTGGGTGGTTCATCTGCTTCCATCCCAGTGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR CCA 90 bp ATTTCACTGGGATGGAAGCAGATGAACCACCCAATCAAACAGTACATGATTACTGCTCCTCCTCCAGTGTaGCTGCATGCTCACGCAGCC +
Preference number: 4 (lower is better)
Translates to: ISLGWKQMNHPIKQYMITAPPPV*LHAHAA
Trigger: GGCTGCGTGAGCATGCAGCCACACTGGAGGAGGAGC...AGTAATCATGTACTGTTTGATTGGGTGGTTCATCTGCTTCCATCCCAGTGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR CCA 90 bp ATTTCACTGGGATGGAAGCAGATGAACCACCCAATCAAACAGTACATGATTACTGATGAGGGCCACGTCTaGCACGAACACCGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: ISLGWKQMNHPIKQYMITDEGHV*HEHRLG
Trigger: CCCAAGCCGGTGTTCGTGCCAGACGTGGCCCTCATC...AGTAATCATGTACTGTTTGATTGGGTGGTTCATCTGCTTCCATCCCAGTGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR CCA 90 bp CAGTACATGATTACTCGGTTTCCAGAAATCTGGATACCAGAAAAACTCAGTAGGAGGGTGGTGACCAGCTaGGCCCCATGCATGCTGACC +
Preference number: 4 (lower is better)
Translates to: QYMITRFPEIWIPEKLSRRVVTS*APCMLT
Trigger: GGTCAGCATGCATGGGGCCCAGCTGGTCACCACCCT...CCTACTGAGTTTTTCTGGTATCCAGATTTCTGGAAACCGAGTAATCATGTACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR CCA 90 bp ATTTCACTGGGATGGAAGCAGATGAACCACCCAATCAAACAGTACATGATTACTCCACTTCTGCTTCCGTaGTCCTGGCCGGCCCTTCAC +
Preference number: 4 (lower is better)
Translates to: ISLGWKQMNHPIKQYMITPLLLP*SWPALH
Trigger: GTGAAGGGCCGGCCAGGACCACGGAAGCAGAAGTGG...AGTAATCATGTACTGTTTGATTGGGTGGTTCATCTGCTTCCATCCCAGTGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR TCA 90 bp CCAATCAAACAGTACATGATTACTCGGTTTCCAGAAATCTGGATACCAGAAAAAACACCGGCTTGGGCATaGAGCGCAGGGCAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: PIKQYMITRFPEIWIPEKTPAWA*SAGQQQ
Trigger: CTGCTGCTGCCCTGCGCTTCATGCCCAAGCCGGTGT...TTTTTCTGGTATCCAGATTTCTGGAAACCGAGTAATCATGTACTGTTTGATTGG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR TCA 90 bp AAGCAGATGAACCACCCAATCAAACAGTACATGATTACTCGGTTTCCAGAAATCGCATGGAGGCATTGCTaGCCAGCCGCACGACATCAG +
Preference number: 4 (lower is better)
Translates to: KQMNHPIKQYMITRFPEIAWRHC*PAARHQ
Trigger: CTGATGTCGTGCGGCTGGTCAGCAATGCCTCCATGC...GATTTCTGGAAACCGAGTAATCATGTACTGTTTGATTGGGTGGTTCATCTGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR TCA 90 bp ATTTCACTGGGATGGAAGCAGATGAACCACCCAATCAAACAGTACATGATTACTGCATGGAGGCATTGCTaGCCAGCCGCACGACATCAG +
Preference number: 4 (lower is better)
Translates to: ISLGWKQMNHPIKQYMITAWRHC*PAARHQ
Trigger: CTGATGTCGTGCGGCTGGTCAGCAATGCCTCCATGC...AGTAATCATGTACTGTTTGATTGGGTGGTTCATCTGCTTCCATCCCAGTGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR TCA 90 bp GCAGATGAACCACCCAATCAAACAGTACATGATTACTCGGTTTCCAGAAATCTGACGCGCCGTATGGTTTaGATGAGGGACGGGATGTCC +
Preference number: 4 (lower is better)
Translates to: ADEPPNQTVHDYSVSRNLTRRMV*MRDGMS
Trigger: GGACATCCCGTCCCTCATTCAAACCATACGGCGCGT...CAGATTTCTGGAAACCGAGTAATCATGTACTGTTTGATTGGGTGGTTCATCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR TCA 90 bp CCAATCAAACAGTACATGATTACTCGGTTTCCAGAAATCTGGATACCAGAAAAATGGGCCCAGGGACGCTaGACTGCAGGAGCCACCTTC +
Preference number: 4 (lower is better)
Translates to: PIKQYMITRFPEIWIPEKWAQGR*TAGATF
Trigger: GAAGGTGGCTCCTGCAGTTCAGCGTCCCTGGGCCCA...TTTTTCTGGTATCCAGATTTCTGGAAACCGAGTAATCATGTACTGTTTGATTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR TCA 90 bp TTCACTGGGATGGAAGCAGATGAACCACCCAATCAAACAGTACATGATTACTCGCCAGAGACAACAAGATaGTGTGGAGGCACAGGCCTG +
Preference number: 4 (lower is better)
Translates to: FTGMEADEPPNQTVHDYSPETTR*CGGTGL
Trigger: CAGGCCTGTGCCTCCACATCATCTTGTTGTCTCTGG...CGAGTAATCATGTACTGTTTGATTGGGTGGTTCATCTGCTTCCATCCCAGTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR GCA 90 bp CTCCTCCCTGCTAAGGAACTTCTCCAGGGGTACAAATGTTCAGGATGGGAGAAGTTCTGTCATGAACCGTaGAAACTGCCGGATCTCATT +
Preference number: 4 (lower is better)
Translates to: LLPAKELLQGYKCSGWEKFCHEP*KLPDLI
Trigger: AATGAGATCCGGCAGTTTGCACGGTTCATGACAGAA...CTTCTCCCATCCTGAACATTTGTACCCCTGGAGAAGTTCCTTAGCAGGGAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR GCA 90 bp AAGCAGATGAACCACCCAATCAAACAGTACATGATTACTCGGTTTCCAGAAATCACCAGCTGGGCCCCATaGATGCTGACCAGCATGGAG +
Preference number: 4 (lower is better)
Translates to: KQMNHPIKQYMITRFPEITSWAP*MLTSME
Trigger: CTCCATGCTGGTCAGCATGCATGGGGCCCAGCTGGT...GATTTCTGGAAACCGAGTAATCATGTACTGTTTGATTGGGTGGTTCATCTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR GCA 90 bp CAGTACATGATTACTCGGTTTCCAGAAATCTGGATACCAGAAAAACTCAGTAGGGTGCCTCCCGCACCTTaGCTGGATATAGGCCGACTG +
Preference number: 4 (lower is better)
Translates to: QYMITRFPEIWIPEKLSRVPPAP*LDIGRL
Trigger: CAGTCGGCCTATATCCAGGCAAGGTGCGGGAGGCAC...CCTACTGAGTTTTTCTGGTATCCAGATTTCTGGAAACCGAGTAATCATGTACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR GCA 90 bp CCACCCAATCAAACAGTACATGATTACTCGGTTTCCAGAAATCTGGATACCAGAAGGTTCCATGGGATCTaGCAGGAGACAGTGAGGCGG +
Preference number: 4 (lower is better)
Translates to: PPNQTVHDYSVSRNLDTRRFHGI*QETVRR
Trigger: CCGCCTCACTGTCTCCTGGCAGATCCCATGGAACCT...TCTGGTATCCAGATTTCTGGAAACCGAGTAATCATGTACTGTTTGATTGGGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR CCA 90 bp AAACAGTACATGATTACTCGGTTTCCAGAAATCTGGATACCAGAAAAACTCAGTCCTCAGTGCTGGGGCTaGCTCTGTGGCCTGTCGGCT +
Preference number: 4 (lower is better)
Translates to: KQYMITRFPEIWIPEKLSPQCWG*LCGLSA
Trigger: AGCCGACAGGCCACAGAGCCAGCCCCAGCACTGAGG...ACTGAGTTTTTCTGGTATCCAGATTTCTGGAAACCGAGTAATCATGTACTGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR CCA 90 bp TACATGATTACTCGGTTTCCAGAAATCTGGATACCAGAAAAACTCAGTAGGAAACCTCAGTGCTGGGGCTaGCTCTGTGGCCTGTCGGCT +
Preference number: 4 (lower is better)
Translates to: YMITRFPEIWIPEKLSRKPQCWG*LCGLSA
Trigger: AGCCGACAGGCCACAGAGCCAGCCCCAGCACTGAGG...TTTCCTACTGAGTTTTTCTGGTATCCAGATTTCTGGAAACCGAGTAATCATGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR CCA 90 bp CCACCCAATCAAACAGTACATGATTACTCGGTTTCCAGAAATCTGGATACCAGAAGGCCCACAAAAGCATaGGAGAAGCACAGCAGCCGG +
Preference number: 4 (lower is better)
Translates to: PPNQTVHDYSVSRNLDTRRPTKA*EKHSSR
Trigger: CCGGCTGCTGTGCTTCTCCCATGCTTTTGTGGGCCT...TCTGGTATCCAGATTTCTGGAAACCGAGTAATCATGTACTGTTTGATTGGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR CCA 90 bp ATTCTTTGCTTCCTCCTCTCCTCTTCCTCCTCCCTGCTAAGGAACTTCTCCAGGTGCACAAAGCCATACTaGTACCAGGTAGTGATCTTG +
Preference number: 4 (lower is better)
Translates to: ILCFLLSSSSSLLRNFSRCTKPY*YQVVIL
Trigger: CAAGATCACTACCTGGTACCAGTATGGCTTTGTGCA...CCTGGAGAAGTTCCTTAGCAGGGAGGAGGAAGAGGAGAGGAGGAAGCAAAGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR CCA 90 bp TCCCTGCTAAGGAACTTCTCCAGGGGTACAAATGTTCAGGATGGGAGAAGGGGAGTATTTAAGGTTCCATaGGATCTGCCAGGAGACAGT +
Preference number: 4 (lower is better)
Translates to: SLLRNFSRGTNVQDGRRGVFKVP*DLPGDS
Trigger: ACTGTCTCCTGGCAGATCCCATGGAACCTTAAATAC...TCCCCTTCTCCCATCCTGAACATTTGTACCCCTGGAGAAGTTCCTTAGCAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR TCA 90 bp AAACAGTACATGATTACTCGGTTTCCAGAAATCTGGATACCAGAAAAACTCAGTGGGCCCCATGCATGCTaGCCAGCATGGAGGCATTGC +
Preference number: 4 (lower is better)
Translates to: KQYMITRFPEIWIPEKLSGPHAC*PAWRHC
Trigger: GCAATGCCTCCATGCTGGTCAGCATGCATGGGGCCC...ACTGAGTTTTTCTGGTATCCAGATTTCTGGAAACCGAGTAATCATGTACTGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR TCA 90 bp GCAGATGAACCACCCAATCAAACAGTACATGATTACTCGGTTTCCAGAAATCTGCCAGAGACAACAAGATaGTGTGGAGGCACAGGCCTG +
Preference number: 4 (lower is better)
Translates to: ADEPPNQTVHDYSVSRNLPETTR*CGGTGL
Trigger: CAGGCCTGTGCCTCCACATCATCTTGTTGTCTCTGG...CAGATTTCTGGAAACCGAGTAATCATGTACTGTTTGATTGGGTGGTTCATCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR TCA 90 bp CTTTGCTTCCTCCTCTCCTCTTCCTCCTCCCTGCTAAGGAACTTCTCCAGGGGTCAATCAAACAGTACATaGTTACTCGGTTTCCAGAAA +
Preference number: 4 (lower is better)
Translates to: LCFLLSSSSSLLRNFSRGQSNST*LLGFQK
Trigger: TTTCTGGAAACCGAGTAATCATGTACTGTTTGATTG...ACCCCTGGAGAAGTTCCTTAGCAGGGAGGAGGAAGAGGAGAGGAGGAAGCAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR GCA 90 bp CCACCCAATCAAACAGTACATGATTACTCGGTTTCCAGAAATCTGGATACCAGAAACACCGCCGAGAGGTaGATCCTAATGCCACTGTGG +
Preference number: 4 (lower is better)
Translates to: PPNQTVHDYSVSRNLDTRNTAER*ILMPLW
Trigger: CCACAGTGGCATTAGGATGCACCTCTCGGCGGTGTT...TCTGGTATCCAGATTTCTGGAAACCGAGTAATCATGTACTGTTTGATTGGGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR GCA 90 bp TACATGATTACTCGGTTTCCAGAAATCTGGATACCAGAAAAACTCAGTAGGAAACTCCTCCAGTGTGGCTaGATGCTCACGCAGCCGCAC +
Preference number: 4 (lower is better)
Translates to: YMITRFPEIWIPEKLSRKLLQCG*MLTQPH
Trigger: GTGCGGCTGCGTGAGCATGCAGCCACACTGGAGGAG...TTTCCTACTGAGTTTTTCTGGTATCCAGATTTCTGGAAACCGAGTAATCATGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR GCA 90 bp GCAGATGAACCACCCAATCAAACAGTACATGATTACTCGGTTTCCAGAAATCTGTGCACACCATGTGTGTaGCGCCCTCCATCAGGATCT +
Preference number: 4 (lower is better)
Translates to: ADEPPNQTVHDYSVSRNLCTPCV*RPPSGS
Trigger: AGATCCTGATGGAGGGCGGCACACACATGGTGTGCA...CAGATTTCTGGAAACCGAGTAATCATGTACTGTTTGATTGGGTGGTTCATCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR GCA 90 bp CAGTACATGATTACTCGGTTTCCAGAAATCTGGATACCAGAAAAACTCAGTAGGGGGACCTCACGGCTTTaGAGGATACGGGCTTGCTCA +
Preference number: 4 (lower is better)
Translates to: QYMITRFPEIWIPEKLSRGTSRL*RIRACS
Trigger: TGAGCAAGCCCGTATCCTGCAAAGCCGTGAGGTCCC...CCTACTGAGTTTTTCTGGTATCCAGATTTCTGGAAACCGAGTAATCATGTACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR GCA 90 bp CAGTACATGATTACTCGGTTTCCAGAAATCTGGATACCAGAAAAACTCAGTAGGTTCCGGCAACAGAGATaGCGTGGGACCTCACGGCTT +
Preference number: 4 (lower is better)
Translates to: QYMITRFPEIWIPEKLSRFRQQR*RGTSRL
Trigger: AAGCCGTGAGGTCCCACGGCATCTCTGTTGCCGGAA...CCTACTGAGTTTTTCTGGTATCCAGATTTCTGGAAACCGAGTAATCATGTACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR GCA 90 bp CTGGGATGGAAGCAGATGAACCACCCAATCAAACAGTACATGATTACTCGGTTTCTGCTCGCTACGTGTTaGACACCAGCACATCTGCAA +
Preference number: 4 (lower is better)
Translates to: LGWKQMNHPIKQYMITRFLLATC*TPAHLQ
Trigger: TTGCAGATGTGCTGGTGTGCAACACGTAGCGAGCAG...AAACCGAGTAATCATGTACTGTTTGATTGGGTGGTTCATCTGCTTCCATCCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR GCA 90 bp CCAATCAAACAGTACATGATTACTCGGTTTCCAGAAATCTGGATACCAGAAAAAGGCCAGGCTGTGGCCTaGTCGCTACGTGTTGCACAC +
Preference number: 4 (lower is better)
Translates to: PIKQYMITRFPEIWIPEKGQAVA*SLRVAH
Trigger: GTGTGCAACACGTAGCGAGCAGGCCACAGCCTGGCC...TTTTTCTGGTATCCAGATTTCTGGAAACCGAGTAATCATGTACTGTTTGATTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR GCA 90 bp AAACAGTACATGATTACTCGGTTTCCAGAAATCTGGATACCAGAAAAACTCAGTCCAGGGACGCTGAACTaGAGGAGCCACCTTCCCGAG +
Preference number: 4 (lower is better)
Translates to: KQYMITRFPEIWIPEKLSPGTLN*RSHLPE
Trigger: CTCGGGAAGGTGGCTCCTGCAGTTCAGCGTCCCTGG...ACTGAGTTTTTCTGGTATCCAGATTTCTGGAAACCGAGTAATCATGTACTGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR CCA 90 bp AAGCAGATGAACCACCCAATCAAACAGTACATGATTACTCGGTTTCCAGAAATCTTCATCTGGAACTCCTaGGCCAGTGCCAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: KQMNHPIKQYMITRFPEIFIWNS*ASASSS
Trigger: GCTGCTGCTGGCACTGGCCCAGGAGTTCCAGATGAA...GATTTCTGGAAACCGAGTAATCATGTACTGTTTGATTGGGTGGTTCATCTGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR CCA 90 bp AAGCAGATGAACCACCCAATCAAACAGTACATGATTACTCGGTTTCCAGAAATCCCATGCCAGGCAGCATaGCCAGCGTCTTATAGGGAG +
Preference number: 4 (lower is better)
Translates to: KQMNHPIKQYMITRFPEIPCQAA*PASYRE
Trigger: CTCCCTATAAGACGCTGGCCATGCTGCCTGGCATGG...GATTTCTGGAAACCGAGTAATCATGTACTGTTTGATTGGGTGGTTCATCTGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR TCA 90 bp CCACCCAATCAAACAGTACATGATTACTCGGTTTCCAGAAATCTGGATACCAGACATCCTGAGAACTGGTaGAAGCCTGAAGCCTGGACT +
Preference number: 4 (lower is better)
Translates to: PPNQTVHDYSVSRNLDTRHPENW*KPEAWT
Trigger: AGTCCAGGCTTCAGGCTTTCACCAGTTCTCAGGATG...TCTGGTATCCAGATTTCTGGAAACCGAGTAATCATGTACTGTTTGATTGGGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344697.3
CDS-3UTR TCA 90 bp CAGTACATGATTACTCGGTTTCCAGAAATCTGGATACCAGAAAAACTCAGTAGGGGCAGCAGGTCGTCATaGAAGACGTGCATGAGGTTG +
Preference number: 4 (lower is better)
Translates to: QYMITRFPEIWIPEKLSRGSRSS*KTCMRL
Trigger: CAACCTCATGCACGTCTTTCATGACGACCTGCTGCC...CCTACTGAGTTTTTCTGGTATCCAGATTTCTGGAAACCGAGTAATCATGTACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR TCA 90 bp CTGGGATGGAAGCAGATGAACCACCCAATCAAACAGTACATGATTACTCGGTTTTCAGCTTTTCTGTCATaGACCGTGCAAACTGCCGGA +
Preference number: 4 (lower is better)
Translates to: LGWKQMNHPIKQYMITRFSAFLS*TVQTAG
Trigger: TCCGGCAGTTTGCACGGTTCATGACAGAAAAGCTGA...AAACCGAGTAATCATGTACTGTTTGATTGGGTGGTTCATCTGCTTCCATCCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR TCA 90 bp TTCACTGGGATGGAAGCAGATGAACCACCCAATCAAACAGTACATGATTACTCGTGTAGTGGTCGGGATTaGCAGCATATGGGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: FTGMEADEPPNQTVHDYSCSGRD*QHMGRA
Trigger: AGCTCTTCCCATATGCTGTCAATCCCGACCACTACA...CGAGTAATCATGTACTGTTTGATTGGGTGGTTCATCTGCTTCCATCCCAGTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR TCA 90 bp AAGCAGATGAACCACCCAATCAAACAGTACATGATTACTCGGTTTCCAGAAATCCAAAGAGGAGTGCTGTaGCACCACACCCCAGAGACA +
Preference number: 4 (lower is better)
Translates to: KQMNHPIKQYMITRFPEIQRGVL*HHTPET
Trigger: TGTCTCTGGGGTGTGGTGTCACAGCACTCCTCTTTG...GATTTCTGGAAACCGAGTAATCATGTACTGTTTGATTGGGTGGTTCATCTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR GCA 90 bp TACATGATTACTCGGTTTCCAGAAATCTGGATACCAGAAAAACTCAGTAGGAAATCCAGTGTGGCTGCATaGTCACGCAGCCGCACATGC +
Preference number: 4 (lower is better)
Translates to: YMITRFPEIWIPEKLSRKSSVAA*SRSRTC
Trigger: GCATGTGCGGCTGCGTGAGCATGCAGCCACACTGGA...TTTCCTACTGAGTTTTTCTGGTATCCAGATTTCTGGAAACCGAGTAATCATGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR GCA 90 bp AAACAGTACATGATTACTCGGTTTCCAGAAATCTGGATACCAGAAAAACTCAGTGAGCTCTACCACAGTTaGCCCACGGGGCAGGAAGAG +
Preference number: 4 (lower is better)
Translates to: KQYMITRFPEIWIPEKLSELYHS*PTGQEE
Trigger: CTCTTCCTGCCCCGTGGGGCAACTGTGGTAGAGCTC...ACTGAGTTTTTCTGGTATCCAGATTTCTGGAAACCGAGTAATCATGTACTGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR GCA 90 bp AATCAAACAGTACATGATTACTCGGTTTCCAGAAATCTGGATACCAGAAAAACTCCAGGGACGCTGAACTaGAGGAGCCACCTTCCCGAG +
Preference number: 4 (lower is better)
Translates to: NQTVHDYSVSRNLDTRKTPGTLN*RSHLPE
Trigger: CTCGGGAAGGTGGCTCCTGCAGTTCAGCGTCCCTGG...AGTTTTTCTGGTATCCAGATTTCTGGAAACCGAGTAATCATGTACTGTTTGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR GCA 90 bp GCAGATGAACCACCCAATCAAACAGTACATGATTACTCGGTTTCCAGAAATCTGTCAAGAGAGGACACCTaGGTGCCCAGTAAGACATGC +
Preference number: 4 (lower is better)
Translates to: ADEPPNQTVHDYSVSRNLSREDT*VPSKTC
Trigger: GCATGTCTTACTGGGCACGCAGGTGTCCTCTCTTGA...CAGATTTCTGGAAACCGAGTAATCATGTACTGTTTGATTGGGTGGTTCATCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441964.1
CDS-3UTR CCA 90 bp AAACAGTACATGATTACTCGGTTTCCAGAAATCTGGATACCAGAAAAACTCAGTTGTGGTCCTCCACGGTaGATAGGTCGAGCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: KQYMITRFPEIWIPEKLSCGPPR*IGRAGL
Trigger: CAGCCCTGCTCGACCTATCCACCGTGGAGGACCACA...ACTGAGTTTTTCTGGTATCCAGATTTCTGGAAACCGAGTAATCATGTACTGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR CCA 90 bp TACATGATTACTCGGTTTCCAGAAATCTGGATACCAGAAAAACTCAGTAGGAAATGTGGTCCTCCACGGTaGATAGGTCGAGCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: YMITRFPEIWIPEKLSRKCGPPR*IGRAGL
Trigger: CAGCCCTGCTCGACCTATCCACCGTGGAGGACCACA...TTTCCTACTGAGTTTTTCTGGTATCCAGATTTCTGGAAACCGAGTAATCATGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR CCA 90 bp AATCAAACAGTACATGATTACTCGGTTTCCAGAAATCTGGATACCAGAAAAACTCTGAGACGAGGATGTTaGCCTTCGGGCCCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: NQTVHDYSVSRNLDTRKTLRRGC*PSGPGA
Trigger: AGCCCCAGGGCCCGAAGGCCAACATCCTCGTCTCAG...AGTTTTTCTGGTATCCAGATTTCTGGAAACCGAGTAATCATGTACTGTTTGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR CCA 90 bp GCAGATGAACCACCCAATCAAACAGTACATGATTACTCGGTTTCCAGAAATCTGACATCAGCAAAGGTGTaGTCCTCCAGGGACACTGTC +
Preference number: 4 (lower is better)
Translates to: ADEPPNQTVHDYSVSRNLTSAKV*SSRDTV
Trigger: GACAGTGTCCCTGGAGGACCACACCTTTGCTGATGT...CAGATTTCTGGAAACCGAGTAATCATGTACTGTTTGATTGGGTGGTTCATCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR CCA 90 bp AAACAGTACATGATTACTCGGTTTCCAGAAATCTGGATACCAGAAAAACTCAGTCGCCAGGCTACATACTaGAGGTCCATGCCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: KQYMITRFPEIWIPEKLSRQATY*RSMPGS
Trigger: GCTGCCTGGCATGGACCTCCAGTATGTAGCCTGGCG...ACTGAGTTTTTCTGGTATCCAGATTTCTGGAAACCGAGTAATCATGTACTGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR TCA 90 bp TCCCTGCTAAGGAACTTCTCCAGGGGTACAAATGTTCAGGATGGGAGAAGGGGACAATCAAACAGTACATaGTTACTCGGTTTCCAGAAA +
Preference number: 4 (lower is better)
Translates to: SLLRNFSRGTNVQDGRRGQSNST*LLGFQK
Trigger: TTTCTGGAAACCGAGTAATCATGTACTGTTTGATTG...TCCCCTTCTCCCATCCTGAACATTTGTACCCCTGGAGAAGTTCCTTAGCAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR GCA 90 bp TACATGATTACTCGGTTTCCAGAAATCTGGATACCAGAAAAACTCAGTAGGAAATTCGGGCCCTGGGGCTaGACAAAGCCATACTGGTAC +
Preference number: 4 (lower is better)
Translates to: YMITRFPEIWIPEKLSRKFGPWG*TKPYWY
Trigger: GTACCAGTATGGCTTTGTGCAGCCCCAGGGCCCGAA...TTTCCTACTGAGTTTTTCTGGTATCCAGATTTCTGGAAACCGAGTAATCATGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR GCA 90 bp CAGTACATGATTACTCGGTTTCCAGAAATCTGGATACCAGAAAAACTCAGTAGGACTGCCGGATCTCATTaGCTGAGACGAGGATGTTGG +
Preference number: 4 (lower is better)
Translates to: QYMITRFPEIWIPEKLSRTAGSH*LRRGCW
Trigger: CCAACATCCTCGTCTCAGGCAATGAGATCCGGCAGT...CCTACTGAGTTTTTCTGGTATCCAGATTTCTGGAAACCGAGTAATCATGTACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR GCA 90 bp CCACCCAATCAAACAGTACATGATTACTCGGTTTCCAGAAATCTGGATACCAGATGCCAGCAGCAGCTCTaGCTCATTCAGAATGAGTCT +
Preference number: 4 (lower is better)
Translates to: PPNQTVHDYSVSRNLDTRCQQQL*LIQNES
Trigger: AGACTCATTCTGAATGAGGCAGAGCTGCTGCTGGCA...TCTGGTATCCAGATTTCTGGAAACCGAGTAATCATGTACTGTTTGATTGGGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR GCA 90 bp AATCAAACAGTACATGATTACTCGGTTTCCAGAAATCTGGATACCAGAAAAACTCATACTGGAGGTCCATaGCAGGCAGCATGGCCAGCG +
Preference number: 4 (lower is better)
Translates to: NQTVHDYSVSRNLDTRKTHTGGP*QAAWPA
Trigger: CGCTGGCCATGCTGCCTGGCATGGACCTCCAGTATG...AGTTTTTCTGGTATCCAGATTTCTGGAAACCGAGTAATCATGTACTGTTTGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR GCA 90 bp TACATGATTACTCGGTTTCCAGAAATCTGGATACCAGAAAAACTCAGTAGGAAAGGGACCTCACGGCTTTaGAGGATACGGGCTTGCTCA +
Preference number: 4 (lower is better)
Translates to: YMITRFPEIWIPEKLSRKGTSRL*RIRACS
Trigger: TGAGCAAGCCCGTATCCTGCAAAGCCGTGAGGTCCC...TTTCCTACTGAGTTTTTCTGGTATCCAGATTTCTGGAAACCGAGTAATCATGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR TCA 90 bp AAACAGTACATGATTACTCGGTTTCCAGAAATCTGGATACCAGAAAAACTCAGTGGCAGCAGGTCGTCATaGAAGACGTGCATGAGGTTG +
Preference number: 4 (lower is better)
Translates to: KQYMITRFPEIWIPEKLSGSRSS*KTCMRL
Trigger: CAACCTCATGCACGTCTTTCATGACGACCTGCTGCC...ACTGAGTTTTTCTGGTATCCAGATTTCTGGAAACCGAGTAATCATGTACTGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR TCA 90 bp TACATGATTACTCGGTTTCCAGAAATCTGGATACCAGAAAAACTCAGTAGGAAACCGGATCTCATTGCCTaGGACGAGGATGTTGGCCTT +
Preference number: 4 (lower is better)
Translates to: YMITRFPEIWIPEKLSRKPDLIA*DEDVGL
Trigger: AAGGCCAACATCCTCGTCTCAGGCAATGAGATCCGG...TTTCCTACTGAGTTTTTCTGGTATCCAGATTTCTGGAAACCGAGTAATCATGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR TCA 90 bp ATTTCACTGGGATGGAAGCAGATGAACCACCCAATCAAACAGTACATGATTACTTGTAGTGGTCGGGATTaGCAGCATATGGGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: ISLGWKQMNHPIKQYMITCSGRD*QHMGRA
Trigger: AGCTCTTCCCATATGCTGTCAATCCCGACCACTACA...AGTAATCATGTACTGTTTGATTGGGTGGTTCATCTGCTTCCATCCCAGTGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR TCA 90 bp AAACAGTACATGATTACTCGGTTTCCAGAAATCTGGATACCAGAAAAACTCAGTCCAGGAGGATCTTGTTaGAGATGCAGCGGACCCACA +
Preference number: 4 (lower is better)
Translates to: KQYMITRFPEIWIPEKLSPGGSC*RCSGPT
Trigger: TGTGGGTCCGCTGCATCTTCAACAAGATCCTCCTGG...ACTGAGTTTTTCTGGTATCCAGATTTCTGGAAACCGAGTAATCATGTACTGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR TCA 90 bp AAGCAGATGAACCACCCAATCAAACAGTACATGATTACTCGGTTTCCAGAAATCGCCAGAGGTTCCTTGTaGTTCTTTGCTTCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: KQMNHPIKQYMITRFPEIARGSL*FFASSS
Trigger: AGAGGAGGAAGCAAAGAATCACAAGGAACCTCTGGC...GATTTCTGGAAACCGAGTAATCATGTACTGTTTGATTGGGTGGTTCATCTGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR TCA 90 bp CCACCCAATCAAACAGTACATGATTACTCGGTTTCCAGAAATCTGGATACCAGATGGGATGGAAGCAGATaGACCACCCAATCAAACAGT +
Preference number: 4 (lower is better)
Translates to: PPNQTVHDYSVSRNLDTRWDGSR*TTQSNS
Trigger: ACTGTTTGATTGGGTGGTTCATCTGCTTCCATCCCA...TCTGGTATCCAGATTTCTGGAAACCGAGTAATCATGTACTGTTTGATTGGGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR TCA 90 bp AAGCAGATGAACCACCCAATCAAACAGTACATGATTACTCGGTTTCCAGAAATCCATCCTGAGAACTGGTaGAAGCCTTACCACCACCAT +
Preference number: 4 (lower is better)
Translates to: KQMNHPIKQYMITRFPEIHPENW*KPYHHH
Trigger: ATGGTGGTGGTAAGGCTTTCACCAGTTCTCAGGATG...GATTTCTGGAAACCGAGTAATCATGTACTGTTTGATTGGGTGGTTCATCTGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441964.1
CDS-3UTR TCA 90 bp AAGCAGATGAACCACCCAATCAAACAGTACATGATTACTCGGTTTCCAGAAATCTCCCTATGGGCATCCTaGGAACTGGTGAAAGCCTTA +
Preference number: 4 (lower is better)
Translates to: KQMNHPIKQYMITRFPEISLWAS*ELVKAL
Trigger: TAAGGCTTTCACCAGTTCTCAGGATGCCCATAGGGA...GATTTCTGGAAACCGAGTAATCATGTACTGTTTGATTGGGTGGTTCATCTGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441964.1
CDS-3UTR GCA 90 bp CAGTACATGATTACTCGGTTTCCAGAAATCTGGATACCAGAAAAACTCAGTAGGATGAACCGTGCAAACTaGCGGATCTCATTGCCTGAG +
Preference number: 4 (lower is better)
Translates to: QYMITRFPEIWIPEKLSRMNRAN*RISLPE
Trigger: CTCAGGCAATGAGATCCGGCAGTTTGCACGGTTCAT...CCTACTGAGTTTTTCTGGTATCCAGATTTCTGGAAACCGAGTAATCATGTACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR GCA 90 bp CAGTACATGATTACTCGGTTTCCAGAAATCTGGATACCAGAAAAACTCAGTAGGTGCCAGCAGCAGCTCTaGCTCATTCAGAATGAGTCT +
Preference number: 4 (lower is better)
Translates to: QYMITRFPEIWIPEKLSRCQQQL*LIQNES
Trigger: AGACTCATTCTGAATGAGGCAGAGCTGCTGCTGGCA...CCTACTGAGTTTTTCTGGTATCCAGATTTCTGGAAACCGAGTAATCATGTACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR GCA 90 bp CAGTACATGATTACTCGGTTTCCAGAAATCTGGATACCAGAAAAACTCAGTAGGGTGGAGGCACAGGCCTaGTCAATAAATAGTTCCCAG +
Preference number: 4 (lower is better)
Translates to: QYMITRFPEIWIPEKLSRVEAQA*SINSSQ
Trigger: CTGGGAACTATTTATTGAGCAGGCCTGTGCCTCCAC...CCTACTGAGTTTTTCTGGTATCCAGATTTCTGGAAACCGAGTAATCATGTACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR CCA 90 bp TTCACTGGGATGGAAGCAGATGAACCACCCAATCAAACAGTACATGATTACTCGAGAATGAGTCTGTTCTaGGTTCGGCTAAAGACCAGA +
Preference number: 4 (lower is better)
Translates to: FTGMEADEPPNQTVHDYSRMSLF*VRLKTR
Trigger: TCTGGTCTTTAGCCGAACCCAGAACAGACTCATTCT...CGAGTAATCATGTACTGTTTGATTGGGTGGTTCATCTGCTTCCATCCCAGTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR CCA 90 bp CTGGGATGGAAGCAGATGAACCACCCAATCAAACAGTACATGATTACTCGGTTTTACAAATGTTCAGGATaGGAGAAGGGGAAGTCAGGT +
Preference number: 4 (lower is better)
Translates to: LGWKQMNHPIKQYMITRFYKCSG*EKGKSG
Trigger: ACCTGACTTCCCCTTCTCCCATCCTGAACATTTGTA...AAACCGAGTAATCATGTACTGTTTGATTGGGTGGTTCATCTGCTTCCATCCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR CCA 90 bp TACATGATTACTCGGTTTCCAGAAATCTGGATACCAGAAAAACTCAGTAGGAAAAGGGGGACTCCTGTGTaGCTCACGTTCAGCTTTTCT +
Preference number: 4 (lower is better)
Translates to: YMITRFPEIWIPEKLSRKRGTPV*LTFSFS
Trigger: AGAAAAGCTGAACGTGAGCCACACAGGAGTCCCCCT...TTTCCTACTGAGTTTTTCTGGTATCCAGATTTCTGGAAACCGAGTAATCATGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR CCA 90 bp AAGCAGATGAACCACCCAATCAAACAGTACATGATTACTCGGTTTCCAGAAATCGGGATTGACAGCATATaGGAAGAGCTCTACCACAGT +
Preference number: 4 (lower is better)
Translates to: KQMNHPIKQYMITRFPEIGIDSI*EELYHS
Trigger: ACTGTGGTAGAGCTCTTCCCATATGCTGTCAATCCC...GATTTCTGGAAACCGAGTAATCATGTACTGTTTGATTGGGTGGTTCATCTGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR TCA 90 bp AATCAAACAGTACATGATTACTCGGTTTCCAGAAATCTGGATACCAGAAAAACTTGCCATGGAAGAAGATaGACTCCTCAGCCTCGTTGG +
Preference number: 4 (lower is better)
Translates to: NQTVHDYSVSRNLDTRKTCHGRR*TPQPRW
Trigger: CCAACGAGGCTGAGGAGTTCATCTTCTTCCATGGCA...AGTTTTTCTGGTATCCAGATTTCTGGAAACCGAGTAATCATGTACTGTTTGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR TCA 90 bp CCAATCAAACAGTACATGATTACTCGGTTTCCAGAAATCTGGATACCAGAAAAAACGAAGTTGAAGTACTaGGTGTTGTGGTCCTCCACG +
Preference number: 4 (lower is better)
Translates to: PIKQYMITRFPEIWIPEKTKLKY*VLWSST
Trigger: CGTGGAGGACCACAACACTCAGTACTTCAACTTCGT...TTTTTCTGGTATCCAGATTTCTGGAAACCGAGTAATCATGTACTGTTTGATTGG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR GCA 90 bp AATCAAACAGTACATGATTACTCGGTTTCCAGAAATCTGGATACCAGAAAAACTCTGCTCGCTACGTGTTaGACACCAGCACATCTGCAA +
Preference number: 4 (lower is better)
Translates to: NQTVHDYSVSRNLDTRKTLLATC*TPAHLQ
Trigger: TTGCAGATGTGCTGGTGTGCAACACGTAGCGAGCAG...AGTTTTTCTGGTATCCAGATTTCTGGAAACCGAGTAATCATGTACTGTTTGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR GCA 90 bp ATTTCACTGGGATGGAAGCAGATGAACCACCCAATCAAACAGTACATGATTACTTTCCTTGTGATTCTTTaGTTCCTCCTCTCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: ISLGWKQMNHPIKQYMITFLVIL*FLLSSS
Trigger: GGAAGAGGAGAGGAGGAAGCAAAGAATCACAAGGAA...AGTAATCATGTACTGTTTGATTGGGTGGTTCATCTGCTTCCATCCCAGTGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR CCA 90 bp TACATGATTACTCGGTTTCCAGAAATCTGGATACCAGAAAAACTCAGTAGGAAAATCCTAATGCCACTGTaGGGCCCTAATGAGATGACG +
Preference number: 4 (lower is better)
Translates to: YMITRFPEIWIPEKLSRKILMPL*GPNEMT
Trigger: CGTCATCTCATTAGGGCCCCACAGTGGCATTAGGAT...TTTCCTACTGAGTTTTTCTGGTATCCAGATTTCTGGAAACCGAGTAATCATGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR CCA 90 bp CCAATCAAACAGTACATGATTACTCGGTTTCCAGAAATCTGGATACCAGAAAAAATCCTAATGCCACTGTaGGGCCCTAATGAGATGACG +
Preference number: 4 (lower is better)
Translates to: PIKQYMITRFPEIWIPEKILMPL*GPNEMT
Trigger: CGTCATCTCATTAGGGCCCCACAGTGGCATTAGGAT...TTTTTCTGGTATCCAGATTTCTGGAAACCGAGTAATCATGTACTGTTTGATTGG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR CCA 90 bp CAGTACATGATTACTCGGTTTCCAGAAATCTGGATACCAGAAAAACTCAGTAGGACAGAGGTGTTGCCATaGAAGAAGATGAACTCCTCA +
Preference number: 4 (lower is better)
Translates to: QYMITRFPEIWIPEKLSRTEVLP*KKMNSS
Trigger: TGAGGAGTTCATCTTCTTCCATGGCAACACCTCTGT...CCTACTGAGTTTTTCTGGTATCCAGATTTCTGGAAACCGAGTAATCATGTACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR CCA 90 bp AATCAAACAGTACATGATTACTCGGTTTCCAGAAATCTGGATACCAGAAAAACTAGGGGGACTCCTGTGTaGCTCACGTTCAGCTTTTCT +
Preference number: 4 (lower is better)
Translates to: NQTVHDYSVSRNLDTRKTRGTPV*LTFSFS
Trigger: AGAAAAGCTGAACGTGAGCCACACAGGAGTCCCCCT...AGTTTTTCTGGTATCCAGATTTCTGGAAACCGAGTAATCATGTACTGTTTGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR CCA 90 bp AATCAAACAGTACATGATTACTCGGTTTCCAGAAATCTGGATACCAGAAAAACTACATCAGCAAAGGTGTaGTCCTCCAGGGACACTGTC +
Preference number: 4 (lower is better)
Translates to: NQTVHDYSVSRNLDTRKTTSAKV*SSRDTV
Trigger: GACAGTGTCCCTGGAGGACCACACCTTTGCTGATGT...AGTTTTTCTGGTATCCAGATTTCTGGAAACCGAGTAATCATGTACTGTTTGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR TCA 90 bp AATCAAACAGTACATGATTACTCGGTTTCCAGAAATCTGGATACCAGAAAAACTGCAGCTCCACGAAGTTaGAGTACTGAGTGTTGTGGT +
Preference number: 4 (lower is better)
Translates to: NQTVHDYSVSRNLDTRKTAAPRS*STECCG
Trigger: ACCACAACACTCAGTACTTCAACTTCGTGGAGCTGC...AGTTTTTCTGGTATCCAGATTTCTGGAAACCGAGTAATCATGTACTGTTTGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR TCA 90 bp AATCAAACAGTACATGATTACTCGGTTTCCAGAAATCTGGATACCAGAAAAACTGCCAGAGGTTCCTTGTaGTTCTTTGCTTCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: NQTVHDYSVSRNLDTRKTARGSL*FFASSS
Trigger: AGAGGAGGAAGCAAAGAATCACAAGGAACCTCTGGC...AGTTTTTCTGGTATCCAGATTTCTGGAAACCGAGTAATCATGTACTGTTTGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR CCA 90 bp TACATGATTACTCGGTTTCCAGAAATCTGGATACCAGAAAAACTCAGTAGGAAAACAGAGGTGTTGCCATaGAAGAAGATGAACTCCTCA +
Preference number: 4 (lower is better)
Translates to: YMITRFPEIWIPEKLSRKTEVLP*KKMNSS
Trigger: TGAGGAGTTCATCTTCTTCCATGGCAACACCTCTGT...TTTCCTACTGAGTTTTTCTGGTATCCAGATTTCTGGAAACCGAGTAATCATGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR CCA 90 bp TACATGATTACTCGGTTTCCAGAAATCTGGATACCAGAAAAACTCAGTAGGAAAAGAATGAGTCTGTTCTaGGTTCGGCTAAAGACCAGA +
Preference number: 4 (lower is better)
Translates to: YMITRFPEIWIPEKLSRKRMSLF*VRLKTR
Trigger: TCTGGTCTTTAGCCGAACCCAGAACAGACTCATTCT...TTTCCTACTGAGTTTTTCTGGTATCCAGATTTCTGGAAACCGAGTAATCATGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR CCA 90 bp CCAATCAAACAGTACATGATTACTCGGTTTCCAGAAATCTGGATACCAGAAAAAGTATTTAAGGTTCCATaGGATCTGCCAGGAGACAGT +
Preference number: 4 (lower is better)
Translates to: PIKQYMITRFPEIWIPEKVFKVP*DLPGDS
Trigger: ACTGTCTCCTGGCAGATCCCATGGAACCTTAAATAC...TTTTTCTGGTATCCAGATTTCTGGAAACCGAGTAATCATGTACTGTTTGATTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR CCA 90 bp AAACAGTACATGATTACTCGGTTTCCAGAAATCTGGATACCAGAAAAACTCAGTTACAAATGTTCAGGATaGGAGAAGGGGAAGTCAGGT +
Preference number: 4 (lower is better)
Translates to: KQYMITRFPEIWIPEKLSYKCSG*EKGKSG
Trigger: ACCTGACTTCCCCTTCTCCCATCCTGAACATTTGTA...ACTGAGTTTTTCTGGTATCCAGATTTCTGGAAACCGAGTAATCATGTACTGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR GCA 90 bp AATCAAACAGTACATGATTACTCGGTTTCCAGAAATCTGGATACCAGAAAAACTTTCCTTGTGATTCTTTaGTTCCTCCTCTCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: NQTVHDYSVSRNLDTRKTFLVIL*FLLSSS
Trigger: GGAAGAGGAGAGGAGGAAGCAAAGAATCACAAGGAA...AGTTTTTCTGGTATCCAGATTTCTGGAAACCGAGTAATCATGTACTGTTTGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR CCA 90 bp AAACAGTACATGATTACTCGGTTTCCAGAAATCTGGATACCAGAAAAACTCAGTAAACACACCCTTCACTaGGCTACAGGTAAATTTCAC +
Preference number: 4 (lower is better)
Translates to: KQYMITRFPEIWIPEKLSKHTLH*ATGKFH
Trigger: GTGAAATTTACCTGTAGCCCAGTGAAGGGTGTGTTT...ACTGAGTTTTTCTGGTATCCAGATTTCTGGAAACCGAGTAATCATGTACTGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR CCA 90 bp AATCAAACAGTACATGATTACTCGGTTTCCAGAAATCTGGATACCAGAAAAACTACCACCACCATGGTATaGACAGTTCTTCTCAAGAGA +
Preference number: 4 (lower is better)
Translates to: NQTVHDYSVSRNLDTRKTTTTMV*TVLLKR
Trigger: TCTCTTGAGAAGAACTGTCCATACCATGGTGGTGGT...AGTTTTTCTGGTATCCAGATTTCTGGAAACCGAGTAATCATGTACTGTTTGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441964.1
CDS CCA 90 bp CAGGAGACAGTGAGGCGGGCCTCGGAGGCGCCATGCACTGACGCCTaGCACCGTGCCTCCCGCACCTTGCCTGGATATAGGCCGACTGTC +
Preference number: 5 (lower is better)
Translates to: QETVRRASEAPCTDA*HRASRTLPGYRPTV
Trigger: GACAGTCGGCCTATATCCAGGCAAGGTGCGGGAGGCACGGTGCCAGGCGTCAGTGCATGGCGCCTCCGAGGCCCGCCTCACTGTCTCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS GCA 90 bp CATGGGATCTGCCAGGAGACAGTGAGGCGGGCCTCGGAGGCGCCATaGACTGACGCCTGGCACCGTGCCTCCCGCACCTTGCCTGGATAT +
Preference number: 5 (lower is better)
Translates to: HGICQETVRRASEAP*TDAWHRASRTLPGY
Trigger: ATATCCAGGCAAGGTGCGGGAGGCACGGTGCCAGGCGTCAGTGCATGGCGCCTCCGAGGCCCGCCTCACTGTCTCCTGGCAGATCCCATG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS TCA 90 bp GCAGCTTGTAGAGGTCGAAGTGTGCACCCTCGCCCCAGCCCTCCATaGAGAAGAGCCGTGCCTCGTGGGCCAGGCCGGGAAACTGCCGCA +
Preference number: 5 (lower is better)
Translates to: AACRGRSVHPRPSPP*RRAVPRGPGRETAA
Trigger: TGCGGCAGTTTCCCGGCCTGGCCCACGAGGCACGGCTCTTCTTCATGGAGGGCTGGGGCGAGGGTGCACACTTCGACCTCTACAAGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS GCA 90 bp TGTGGCTGCATGCTCACGCAGCCGCACATGCTTCCACAGGACCGCTaGCAGCACCGACACCAGGAGGGCGTTGAACACCGCCGAGAGGTG +
Preference number: 5 (lower is better)
Translates to: CGCMLTQPHMLPQDR*QHRHQEGVEHRREV
Trigger: CACCTCTCGGCGGTGTTCAACGCCCTCCTGGTGTCGGTGCTGGCAGCGGTCCTGTGGAAGCATGTGCGGCTGCGTGAGCATGCAGCCACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS GCA 90 bp GCCCTCCATCAGGATCTGCAGTGCCTTCGGGTAGTCGATCCTCAGTaGTGGGGCTGGCTCTGTGGCCTGTCGGCTGAGGGCCAGCTCCTC +
Preference number: 5 (lower is better)
Translates to: ALHQDLQCLRVVDPQ*WGWLCGLSAEGQLL
Trigger: GAGGAGCTGGCCCTCAGCCGACAGGCCACAGAGCCAGCCCCAGCACTGAGGATCGACTACCCGAAGGCACTGCAGATCCTGATGGAGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS GCA 90 bp GTCGAAGTGTGCACCCTCGCCCCAGCCCTCCATGAAGAAGAGCCGTaGCTCGTGGGCCAGGCCGGGAAACTGCCGCAGGGTGTAGAAGAG +
Preference number: 5 (lower is better)
Translates to: VEVCTLAPALHEEEP*LVGQAGKLPQGVEE
Trigger: CTCTTCTACACCCTGCGGCAGTTTCCCGGCCTGGCCCACGAGGCACGGCTCTTCTTCATGGAGGGCTGGGGCGAGGGTGCACACTTCGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS GCA 90 bp CGGAGGCGCCATGCACTGACGCCTGGCACCGTGCCTCCCGCACCTTaGCTGGATATAGGCCGACTGTCCACTTCTGCTTCCGTGGTCCTG +
Preference number: 5 (lower is better)
Translates to: RRRHALTPGTVPPAP*LDIGRLSTSASVVL
Trigger: CAGGACCACGGAAGCAGAAGTGGACAGTCGGCCTATATCCAGGCAAGGTGCGGGAGGCACGGTGCCAGGCGTCAGTGCATGGCGCCTCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS GCA 90 bp GCCCGTGCACACCATGTGTGTGCCGCCCTCCATCAGGATCTGCAGTaGCTTCGGGTAGTCGATCCTCAGTGCTGGGGCTGGCTCTGTGGC +
Preference number: 5 (lower is better)
Translates to: ARAHHVCAALHQDLQ*LRVVDPQCWGWLCG
Trigger: GCCACAGAGCCAGCCCCAGCACTGAGGATCGACTACCCGAAGGCACTGCAGATCCTGATGGAGGGCGGCACACACATGGTGTGCACGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS GCA 90 bp GGCAGATGCGGTCTGTGTGCGTGCGGCCCGTGCACACCATGTGTGTaGCGCCCTCCATCAGGATCTGCAGTGCCTTCGGGTAGTCGATCC +
Preference number: 5 (lower is better)
Translates to: GRCGLCACGPCTPCV*RPPSGSAVPSGSRS
Trigger: GGATCGACTACCCGAAGGCACTGCAGATCCTGATGGAGGGCGGCACACACATGGTGTGCACGGGCCGCACGCACACAGACCGCATCTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS GCA 90 bp CACTCGGGGTTCCGGCAACAGAGATGCCGTGGGACCTCACGGCTTTaGAGGATACGGGCTTGCTCAGCCCGGTCCAGATGGGTGATGCCC +
Preference number: 5 (lower is better)
Translates to: HSGFRQQRCRGTSRL*RIRACSARSRWVMP
Trigger: GGGCATCACCCATCTGGACCGGGCTGAGCAAGCCCGTATCCTGCAAAGCCGTGAGGTCCCACGGCATCTCTGTTGCCGGAACCCCGAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS GCA 90 bp CGTGCCTCCCGCACCTTGCCTGGATATAGGCCGACTGTCCACTTCTaGTTCCGTGGTCCTGGCCGGCCCTTCACCACGCGCCGTATGGTT +
Preference number: 5 (lower is better)
Translates to: RASRTLPGYRPTVHF*FRGPGRPFTTRRMV
Trigger: AACCATACGGCGCGTGGTGAAGGGCCGGCCAGGACCACGGAAGCAGAAGTGGACAGTCGGCCTATATCCAGGCAAGGTGCGGGAGGCACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS CCA 90 bp CTCCATCAGGATCTGCAGTGCCTTCGGGTAGTCGATCCTCAGTGCTaGGGCTGGCTCTGTGGCCTGTCGGCTGAGGGCCAGCTCCTCCTC +
Preference number: 5 (lower is better)
Translates to: LHQDLQCLRVVDPQC*GWLCGLSAEGQLLL
Trigger: GAGGAGGAGCTGGCCCTCAGCCGACAGGCCACAGAGCCAGCCCCAGCACTGAGGATCGACTACCCGAAGGCACTGCAGATCCTGATGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS GCA 90 bp CAGGAGAGGCTGCTTGGGGCTGAGCAGCTTGTAGAGGTCGAAGTGTaGACCCTCGCCCCAGCCCTCCATGAAGAAGAGCCGTGCCTCGTG +
Preference number: 5 (lower is better)
Translates to: QERLLGAEQLVEVEV*TLAPALHEEEPCLV
Trigger: CACGAGGCACGGCTCTTCTTCATGGAGGGCTGGGGCGAGGGTGCACACTTCGACCTCTACAAGCTGCTCAGCCCCAAGCAGCCTCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS GCA 90 bp GACGCTGAACTGCAGGAGCCACCTTCCCGAGGCCAGGCTGTGGCCTaGTCGCTACGTGTTGCACACCAGCACATCTGCAAAGGGTCCCAG +
Preference number: 5 (lower is better)
Translates to: DAELQEPPSRGQAVA*SLRVAHQHICKGSQ
Trigger: CTGGGACCCTTTGCAGATGTGCTGGTGTGCAACACGTAGCGAGCAGGCCACAGCCTGGCCTCGGGAAGGTGGCTCCTGCAGTTCAGCGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS GCA 90 bp CCAGAAGTCTCCACAGTGGGATTAATGGGCCCAGGGACGCTGAACTaGAGGAGCCACCTTCCCGAGGCCAGGCTGTGGCCTGCTCGCTAC +
Preference number: 5 (lower is better)
Translates to: PEVSTVGLMGPGTLN*RSHLPEARLWPARY
Trigger: GTAGCGAGCAGGCCACAGCCTGGCCTCGGGAAGGTGGCTCCTGCAGTTCAGCGTCCCTGGGCCCATTAATCCCACTGTGGAGACTTCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS CCA 90 bp CCAGGGACGCTGAACTGCAGGAGCCACCTTCCCGAGGCCAGGCTGTaGCCTGCTCGCTACGTGTTGCACACCAGCACATCTGCAAAGGGT +
Preference number: 5 (lower is better)
Translates to: PGTLNCRSHLPEARL*PARYVLHTSTSAKG
Trigger: ACCCTTTGCAGATGTGCTGGTGTGCAACACGTAGCGAGCAGGCCACAGCCTGGCCTCGGGAAGGTGGCTCCTGCAGTTCAGCGTCCCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS GCA 90 bp GCTGCCAGCACCGACACCAGGAGGGCGTTGAACACCGCCGAGAGGTaGATCCTAATGCCACTGTGGGGCCCTAATGAGATGACGGCCACT +
Preference number: 5 (lower is better)
Translates to: AASTDTRRALNTAER*ILMPLWGPNEMTAT
Trigger: AGTGGCCGTCATCTCATTAGGGCCCCACAGTGGCATTAGGATGCACCTCTCGGCGGTGTTCAACGCCCTCCTGGTGTCGGTGCTGGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR CAA 90 bp CACAGTGGGATTAATGGGCCCAGGGACGCTGAACTGCAGGAGCCACCTTCCCGACGTGCCTCCCGCACCTaGCCTGGATATAGGCCGACT +
Preference number: 5 (lower is better)
Translates to: HSGINGPRDAELQEPPSRRASRT*PGYRPT
Trigger: AGTCGGCCTATATCCAGGCAAGGTGCGGGAGGCACG...TCGGGAAGGTGGCTCCTGCAGTTCAGCGTCCCTGGGCCCATTAATCCCACTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR CAA 90 bp TCCTCCCTGCTAAGGAACTTCTCCAGGGGTACAAATGTTCAGGATGGGAGAAGGGCAGCCAGCACAGGTTaGGCCGCGCCGCCGGGTTCG +
Preference number: 5 (lower is better)
Translates to: SSLLRNFSRGTNVQDGRRAASTG*AAPPGS
Trigger: CGAACCCGGCGGCGCGGCCAAACCTGTGCTGGCTGC...CCTTCTCCCATCCTGAACATTTGTACCCCTGGAGAAGTTCCTTAGCAGGGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344697.3
CDS-3UTR CAA 90 bp CACAGTGGGATTAATGGGCCCAGGGACGCTGAACTGCAGGAGCCACCTTCCCGATTGCAGGATACGGGCTaGCTCAGCCCGGTCCAGATG +
Preference number: 5 (lower is better)
Translates to: HSGINGPRDAELQEPPSRLQDTG*LSPVQM
Trigger: CATCTGGACCGGGCTGAGCAAGCCCGTATCCTGCAA...TCGGGAAGGTGGCTCCTGCAGTTCAGCGTCCCTGGGCCCATTAATCCCACTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS TCA 90 bp ATGAAGCGCAGGGCAGCAGCAGGCAGCTCCACGAAGTTGAAGTACTaGGTGTTGTGGTCCTCCACGGTGGATAGGTCGAGCAGGGCTGGC +
Preference number: 5 (lower is better)
Translates to: MKRRAAAGSSTKLKY*VLWSSTVDRSSRAG
Trigger: GCCAGCCCTGCTCGACCTATCCACCGTGGAGGACCACAACACTCAGTACTTCAACTTCGTGGAGCTGCCTGCTGCTGCCCTGCGCTTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS TCA 90 bp TCCGTGGTCCTGGCCGGCCCTTCACCACGCGCCGTATGGTTTGAATaGGGGACGGGATGTCCACCTTGGTGTCCTGGTAGATTCGGAAGA +
Preference number: 5 (lower is better)
Translates to: SVVLAGPSPRAVWFE*GTGCPPWCPGRFGR
Trigger: TCTTCCGAATCTACCAGGACACCAAGGTGGACATCCCGTCCCTCATTCAAACCATACGGCGCGTGGTGAAGGGCCGGCCAGGACCACGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR CAA 90 bp ACAGTGGGATTAATGGGCCCAGGGACGCTGAACTGCAGGAGCCACCTTCCCGAGATGAGGTTGTCGGGGTaGAAGCGGTTGGCGATGAGG +
Preference number: 5 (lower is better)
Translates to: TVGLMGPGTLNCRSHLPEMRLSG*KRLAMR
Trigger: CCTCATCGCCAACCGCTTCAACCCCGACAACCTCAT...CTCGGGAAGGTGGCTCCTGCAGTTCAGCGTCCCTGGGCCCATTAATCCCACTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR CAA 90 bp TCCTCCCTGCTAAGGAACTTCTCCAGGGGTACAAATGTTCAGGATGGGAGAAGGCGCCGGGAGCCCAGGTaGGGCAGCATGACAGAGGTG +
Preference number: 5 (lower is better)
Translates to: SSLLRNFSRGTNVQDGRRRREPR*GSMTEV
Trigger: CACCTCTGTCATGCTGCCCAACCTGGGCTCCCGGCG...CCTTCTCCCATCCTGAACATTTGTACCCCTGGAGAAGTTCCTTAGCAGGGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS TCA 90 bp CAGCTTTTCTGTCATGAACCGTGCAAACTGCCGGATCTCATTGCCTaGGACGAGGATGTTGGCCTTCGGGCCCTGGGGCTGCACAAAGCC +
Preference number: 5 (lower is better)
Translates to: QLFCHEPCKLPDLIA*DEDVGLRALGLHKA
Trigger: GGCTTTGTGCAGCCCCAGGGCCCGAAGGCCAACATCCTCGTCTCAGGCAATGAGATCCGGCAGTTTGCACGGTTCATGACAGAAAAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS TCA 90 bp CAGGCAGCATGGCCAGCGTCTTATAGGGAGTGTAGTGGTCGGGATTaGCAGCATATGGGAAGAGCTCTACCACAGTTGCCCCACGGGGCA +
Preference number: 5 (lower is better)
Translates to: QAAWPASYRECSGRD*QHMGRALPQLPHGA
Trigger: TGCCCCGTGGGGCAACTGTGGTAGAGCTCTTCCCATATGCTGTCAATCCCGACCACTACACTCCCTATAAGACGCTGGCCATGCTGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS GCA 90 bp ATCTCATTGCCTGAGACGAGGATGTTGGCCTTCGGGCCCTGGGGCTaGACAAAGCCATACTGGTACCAGGTAGTGATCTTGGAGAGGCCC +
Preference number: 5 (lower is better)
Translates to: ISLPETRMLAFGPWG*TKPYWYQVVILERP
Trigger: GGGCCTCTCCAAGATCACTACCTGGTACCAGTATGGCTTTGTGCAGCCCCAGGGCCCGAAGGCCAACATCCTCGTCTCAGGCAATGAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS GCA 90 bp TACTTCACCTCCCTCACCTTCAGGTATTTAAGGTTCCATGGGATCTaGCAGGAGACAGTGAGGCGGGCCTCGGAGGCGCCATGCACTGAC +
Preference number: 5 (lower is better)
Translates to: YFTSLTFRYLRFHGI*QETVRRASEAPCTD
Trigger: GTCAGTGCATGGCGCCTCCGAGGCCCGCCTCACTGTCTCCTGGCAGATCCCATGGAACCTTAAATACCTGAAGGTGAGGGAGGTGAAGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS CCA 90 bp ACGAGGATGTTGGCCTTCGGGCCCTGGGGCTGCACAAAGCCATACTaGTACCAGGTAGTGATCTTGGAGAGGCCCACAAAAGCATGGGAG +
Preference number: 5 (lower is better)
Translates to: TRMLAFGPWGCTKPY*YQVVILERPTKAWE
Trigger: CTCCCATGCTTTTGTGGGCCTCTCCAAGATCACTACCTGGTACCAGTATGGCTTTGTGCAGCCCCAGGGCCCGAAGGCCAACATCCTCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR CAA 90 bp CTCCTCCCTGCTAAGGAACTTCTCCAGGGGTACAAATGTTCAGGATGGGAGAAGGACACCAGGAGGGCGTaGAACACCGCCGAGAGGTGC +
Preference number: 5 (lower is better)
Translates to: LLPAKELLQGYKCSGWEKDTRRA*NTAERC
Trigger: GCACCTCTCGGCGGTGTTCAACGCCCTCCTGGTGTC...CTTCTCCCATCCTGAACATTTGTACCCCTGGAGAAGTTCCTTAGCAGGGAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS GCA 90 bp CCTGTGTGGCTCACGTTCAGCTTTTCTGTCATGAACCGTGCAAACTaGCGGATCTCATTGCCTGAGACGAGGATGTTGGCCTTCGGGCCC +
Preference number: 5 (lower is better)
Translates to: PVWLTFSFSVMNRAN*RISLPETRMLAFGP
Trigger: GGGCCCGAAGGCCAACATCCTCGTCTCAGGCAATGAGATCCGGCAGTTTGCACGGTTCATGACAGAAAAGCTGAACGTGAGCCACACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS GCA 90 bp TGTTCTCTGGCATCATGTTCCGCCAGGCTACATACTGGAGGTCCATaGCAGGCAGCATGGCCAGCGTCTTATAGGGAGTGTAGTGGTCGG +
Preference number: 5 (lower is better)
Translates to: CSLASCSARLHTGGP*QAAWPASYRECSGR
Trigger: CCGACCACTACACTCCCTATAAGACGCTGGCCATGCTGCCTGGCATGGACCTCCAGTATGTAGCCTGGCGGAACATGATGCCAGAGAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS CCA 90 bp AGCATGGAGGCATTGCTGACCAGCCGCACGACATCAGCAAAGGTGTaGTCCTCCAGGGACACTGTCACTGTCTTCATCTGGAACTCCTGG +
Preference number: 5 (lower is better)
Translates to: SMEALLTSRTTSAKV*SSRDTVTVFIWNSW
Trigger: CCAGGAGTTCCAGATGAAGACAGTGACAGTGTCCCTGGAGGACCACACCTTTGCTGATGTCGTGCGGCTGGTCAGCAATGCCTCCATGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR CAA 90 bp GGATGGGAGAAGGGGAAGTCAGGTCCCTTATCTCTAGGGCAAAGAGGAGTGCTGCACGCGCCGTATGGTTaGAATGAGGGACGGGATGTC +
Preference number: 5 (lower is better)
Translates to: GWEKGKSGPLSLGQRGVLHAPYG*NEGRDV
Trigger: GACATCCCGTCCCTCATTCAAACCATACGGCGCGTG...CAGCACTCCTCTTTGCCCTAGAGATAAGGGACCTGACTTCCCCTTCTCCCATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS TCA 90 bp CGCCTAGGGGGACTCCTGTGTGGCTCACGTTCAGCTTTTCTGTCATaGACCGTGCAAACTGCCGGATCTCATTGCCTGAGACGAGGATGT +
Preference number: 5 (lower is better)
Translates to: RLGGLLCGSRSAFLS*TVQTAGSHCLRRGC
Trigger: ACATCCTCGTCTCAGGCAATGAGATCCGGCAGTTTGCACGGTTCATGACAGAAAAGCTGAACGTGAGCCACACAGGAGTCCCCCTAGGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR CAA 90 bp CTCCTCCCTGCTAAGGAACTTCTCCAGGGGTACAAATGTTCAGGATGGGAGAAGTTGCAGGATACGGGCTaGCTCAGCCCGGTCCAGATG +
Preference number: 5 (lower is better)
Translates to: LLPAKELLQGYKCSGWEKLQDTG*LSPVQM
Trigger: CATCTGGACCGGGCTGAGCAAGCCCGTATCCTGCAA...CTTCTCCCATCCTGAACATTTGTACCCCTGGAGAAGTTCCTTAGCAGGGAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR CAA 90 bp ATTCTTTGCTTCCTCCTCTCCTCTTCCTCCTCCCTGCTAAGGAACTTCTCCAGGTGGGACCTCACGGCTTaGCAGGATACGGGCTTGCTC +
Preference number: 5 (lower is better)
Translates to: ILCFLLSSSSSLLRNFSRWDLTA*QDTGLL
Trigger: GAGCAAGCCCGTATCCTGCAAAGCCGTGAGGTCCCA...CCTGGAGAAGTTCCTTAGCAGGGAGGAGGAAGAGGAGAGGAGGAAGCAAAGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR CAA 90 bp CTCCCTGCTAAGGAACTTCTCCAGGGGTACAAATGTTCAGGATGGGAGAAGGGGCCTGCTCGCTACGTGTaGCACACCAGCACATCTGCA +
Preference number: 5 (lower is better)
Translates to: LPAKELLQGYKCSGWEKGPARYV*HTSTSA
Trigger: TGCAGATGTGCTGGTGTGCAACACGTAGCGAGCAGG...CCCCTTCTCCCATCCTGAACATTTGTACCCCTGGAGAAGTTCCTTAGCAGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR CAA 90 bp CTTTGCTTCCTCCTCTCCTCTTCCTCCTCCCTGCTAAGGAACTTCTCCAGGGGTAACTGCCGGATCTCATaGCCTGAGACGAGGATGTTG +
Preference number: 5 (lower is better)
Translates to: LCFLLSSSSSLLRNFSRGNCRIS*PETRML
Trigger: CAACATCCTCGTCTCAGGCAATGAGATCCGGCAGTT...ACCCCTGGAGAAGTTCCTTAGCAGGGAGGAGGAAGAGGAGAGGAGGAAGCAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR CAA 90 bp TCCTCCCTGCTAAGGAACTTCTCCAGGGGTACAAATGTTCAGGATGGGAGAAGGCCCAGGAGGATCTTGTaGAAGATGCAGCGGACCCAC +
Preference number: 5 (lower is better)
Translates to: SSLLRNFSRGTNVQDGRRPRRIL*KMQRTH
Trigger: GTGGGTCCGCTGCATCTTCAACAAGATCCTCCTGGG...CCTTCTCCCATCCTGAACATTTGTACCCCTGGAGAAGTTCCTTAGCAGGGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS GCA 90 bp TTACCACCACCATGGTATGGACAGTTCTTCTCAAGAGAGGACACCTaGGTGCCCAGTAAGACATGCCCTCAGCTGGAGTTCCGACATCTG +
Preference number: 5 (lower is better)
Translates to: LPPPWYGQFFSREDT*VPSKTCPQLEFRHL
Trigger: CAGATGTCGGAACTCCAGCTGAGGGCATGTCTTACTGGGCACGCAGGTGTCCTCTCTTGAGAAGAACTGTCCATACCATGGTGGTGGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441964.1
CDS-3UTR CAA 90 bp TTCACTGGGATGGAAGCAGATGAACCACCCAATCAAACAGTACATGATTACTCGGACACCAGGAGGGCGTaGAACACCGCCGAGAGGTGC +
Preference number: 5 (lower is better)
Translates to: FTGMEADEPPNQTVHDYSDTRRA*NTAERC
Trigger: GCACCTCTCGGCGGTGTTCAACGCCCTCCTGGTGTC...CGAGTAATCATGTACTGTTTGATTGGGTGGTTCATCTGCTTCCATCCCAGTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR CAA 90 bp GCAGATGAACCACCCAATCAAACAGTACATGATTACTCGGTTTCCAGAAATCTGCGCCGGGAGCCCAGGTaGGGCAGCATGACAGAGGTG +
Preference number: 5 (lower is better)
Translates to: ADEPPNQTVHDYSVSRNLRREPR*GSMTEV
Trigger: CACCTCTGTCATGCTGCCCAACCTGGGCTCCCGGCG...CAGATTTCTGGAAACCGAGTAATCATGTACTGTTTGATTGGGTGGTTCATCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR CAA 90 bp CCACCCAATCAAACAGTACATGATTACTCGGTTTCCAGAAATCTGGATACCAGACCTGAGACGAGGATGTaGGCCTTCGGGCCCTGGGGC +
Preference number: 5 (lower is better)
Translates to: PPNQTVHDYSVSRNLDTRPETRM*AFGPWG
Trigger: GCCCCAGGGCCCGAAGGCCAACATCCTCGTCTCAGG...TCTGGTATCCAGATTTCTGGAAACCGAGTAATCATGTACTGTTTGATTGGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR CAA 90 bp GCAGATGAACCACCCAATCAAACAGTACATGATTACTCGGTTTCCAGAAATCTGCCTGAGACGAGGATGTaGGCCTTCGGGCCCTGGGGC +
Preference number: 5 (lower is better)
Translates to: ADEPPNQTVHDYSVSRNLPETRM*AFGPWG
Trigger: GCCCCAGGGCCCGAAGGCCAACATCCTCGTCTCAGG...CAGATTTCTGGAAACCGAGTAATCATGTACTGTTTGATTGGGTGGTTCATCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS GCA 90 bp GGACAGTTCTTCTCAAGAGAGGACACCTGCGTGCCCAGTAAGACATaGCCTCAGCTGGAGTTCCGACATCTGATCTCTAGGAGGAAAGAA +
Preference number: 5 (lower is better)
Translates to: GQFFSREDTCVPSKT*PQLEFRHLISRRKE
Trigger: TTCTTTCCTCCTAGAGATCAGATGTCGGAACTCCAGCTGAGGGCATGTCTTACTGGGCACGCAGGTGTCCTCTCTTGAGAAGAACTGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441964.1
CDS-3UTR CAA 90 bp TTCACTGGGATGGAAGCAGATGAACCACCCAATCAAACAGTACATGATTACTCGTGGGACCTCACGGCTTaGCAGGATACGGGCTTGCTC +
Preference number: 5 (lower is better)
Translates to: FTGMEADEPPNQTVHDYSWDLTA*QDTGLL
Trigger: GAGCAAGCCCGTATCCTGCAAAGCCGTGAGGTCCCA...CGAGTAATCATGTACTGTTTGATTGGGTGGTTCATCTGCTTCCATCCCAGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR CAA 90 bp CTGGGATGGAAGCAGATGAACCACCCAATCAAACAGTACATGATTACTCGGTTTATGAGGTTGTCGGGGTaGAAGCGGTTGGCGATGAGG +
Preference number: 5 (lower is better)
Translates to: LGWKQMNHPIKQYMITRFMRLSG*KRLAMR
Trigger: CCTCATCGCCAACCGCTTCAACCCCGACAACCTCAT...AAACCGAGTAATCATGTACTGTTTGATTGGGTGGTTCATCTGCTTCCATCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR CAA 90 bp CTGGGATGGAAGCAGATGAACCACCCAATCAAACAGTACATGATTACTCGGTTTCACGCGCCGTATGGTTaGAATGAGGGACGGGATGTC +
Preference number: 5 (lower is better)
Translates to: LGWKQMNHPIKQYMITRFHAPYG*NEGRDV
Trigger: GACATCCCGTCCCTCATTCAAACCATACGGCGCGTG...AAACCGAGTAATCATGTACTGTTTGATTGGGTGGTTCATCTGCTTCCATCCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR CAA 90 bp CAGTACATGATTACTCGGTTTCCAGAAATCTGGATACCAGAAAAACTCAGTAGGCGTGCCTCCCGCACCTaGCCTGGATATAGGCCGACT +
Preference number: 5 (lower is better)
Translates to: QYMITRFPEIWIPEKLSRRASRT*PGYRPT
Trigger: AGTCGGCCTATATCCAGGCAAGGTGCGGGAGGCACG...CCTACTGAGTTTTTCTGGTATCCAGATTTCTGGAAACCGAGTAATCATGTACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR CAA 90 bp CTGGGATGGAAGCAGATGAACCACCCAATCAAACAGTACATGATTACTCGGTTTGGTCCCAGGAGGATCTaGTTGAAGATGCAGCGGACC +
Preference number: 5 (lower is better)
Translates to: LGWKQMNHPIKQYMITRFGPRRI*LKMQRT
Trigger: GGTCCGCTGCATCTTCAACAAGATCCTCCTGGGACC...AAACCGAGTAATCATGTACTGTTTGATTGGGTGGTTCATCTGCTTCCATCCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR CAA 90 bp TCCTCCCTGCTAAGGAACTTCTCCAGGGGTACAAATGTTCAGGATGGGAGAAGGGTTCCTTGTGATTCTTaGCTTCCTCCTCTCCTCTTC +
Preference number: 5 (lower is better)
Translates to: SSLLRNFSRGTNVQDGRRVPCDS*LPPLLF
Trigger: GAAGAGGAGAGGAGGAAGCAAAGAATCACAAGGAAC...CCTTCTCCCATCCTGAACATTTGTACCCCTGGAGAAGTTCCTTAGCAGGGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR CAA 90 bp TTCACTGGGATGGAAGCAGATGAACCACCCAATCAAACAGTACATGATTACTCGAAGACGTGCATGAGGTaGTCGGGGTTGAAGCGGTTG +
Preference number: 5 (lower is better)
Translates to: FTGMEADEPPNQTVHDYSKTCMR*SGLKRL
Trigger: CAACCGCTTCAACCCCGACAACCTCATGCACGTCTT...CGAGTAATCATGTACTGTTTGATTGGGTGGTTCATCTGCTTCCATCCCAGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR CAA 90 bp ATTTCACTGGGATGGAAGCAGATGAACCACCCAATCAAACAGTACATGATTACTACCAGCATGGAGGCATaGCTGACCAGCCGCACGACA +
Preference number: 5 (lower is better)
Translates to: ISLGWKQMNHPIKQYMITTSMEA*LTSRTT
Trigger: TGTCGTGCGGCTGGTCAGCAATGCCTCCATGCTGGT...AGTAATCATGTACTGTTTGATTGGGTGGTTCATCTGCTTCCATCCCAGTGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR CAA 90 bp CAGTACATGATTACTCGGTTTCCAGAAATCTGGATACCAGAAAAACTCAGTAGGCCCAGGAGGATCTTGTaGAAGATGCAGCGGACCCAC +
Preference number: 5 (lower is better)
Translates to: QYMITRFPEIWIPEKLSRPRRIL*KMQRTH
Trigger: GTGGGTCCGCTGCATCTTCAACAAGATCCTCCTGGG...CCTACTGAGTTTTTCTGGTATCCAGATTTCTGGAAACCGAGTAATCATGTACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR CAA 90 bp CAGTACATGATTACTCGGTTTCCAGAAATCTGGATACCAGAAAAACTCAGTAGGGGTCCCAGGAGGATCTaGTTGAAGATGCAGCGGACC +
Preference number: 5 (lower is better)
Translates to: QYMITRFPEIWIPEKLSRGPRRI*LKMQRT
Trigger: GGTCCGCTGCATCTTCAACAAGATCCTCCTGGGACC...CCTACTGAGTTTTTCTGGTATCCAGATTTCTGGAAACCGAGTAATCATGTACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR CAA 90 bp CAGTACATGATTACTCGGTTTCCAGAAATCTGGATACCAGAAAAACTCAGTAGGCCTGCTCGCTACGTGTaGCACACCAGCACATCTGCA +
Preference number: 5 (lower is better)
Translates to: QYMITRFPEIWIPEKLSRPARYV*HTSTSA
Trigger: TGCAGATGTGCTGGTGTGCAACACGTAGCGAGCAGG...CCTACTGAGTTTTTCTGGTATCCAGATTTCTGGAAACCGAGTAATCATGTACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR CAA 90 bp AAGCAGATGAACCACCCAATCAAACAGTACATGATTACTCGGTTTCCAGAAATCAAGACGTGCATGAGGTaGTCGGGGTTGAAGCGGTTG +
Preference number: 5 (lower is better)
Translates to: KQMNHPIKQYMITRFPEIKTCMR*SGLKRL
Trigger: CAACCGCTTCAACCCCGACAACCTCATGCACGTCTT...GATTTCTGGAAACCGAGTAATCATGTACTGTTTGATTGGGTGGTTCATCTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR CAA 90 bp CCAATCAAACAGTACATGATTACTCGGTTTCCAGAAATCTGGATACCAGAAAAAACCAGCATGGAGGCATaGCTGACCAGCCGCACGACA +
Preference number: 5 (lower is better)
Translates to: PIKQYMITRFPEIWIPEKTSMEA*LTSRTT
Trigger: TGTCGTGCGGCTGGTCAGCAATGCCTCCATGCTGGT...TTTTTCTGGTATCCAGATTTCTGGAAACCGAGTAATCATGTACTGTTTGATTGG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR CAA 90 bp CCAATCAAACAGTACATGATTACTCGGTTTCCAGAAATCTGGATACCAGAAAAAAGAGCTCTACCACAGTaGCCCCACGGGGCAGGAAGA +
Preference number: 5 (lower is better)
Translates to: PIKQYMITRFPEIWIPEKRALPQ*PHGAGR
Trigger: TCTTCCTGCCCCGTGGGGCAACTGTGGTAGAGCTCT...TTTTTCTGGTATCCAGATTTCTGGAAACCGAGTAATCATGTACTGTTTGATTGG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR CAA 90 bp TACATGATTACTCGGTTTCCAGAAATCTGGATACCAGAAAAACTCAGTAGGAAAAGAGCTCTACCACAGTaGCCCCACGGGGCAGGAAGA +
Preference number: 5 (lower is better)
Translates to: YMITRFPEIWIPEKLSRKRALPQ*PHGAGR
Trigger: TCTTCCTGCCCCGTGGGGCAACTGTGGTAGAGCTCT...TTTCCTACTGAGTTTTTCTGGTATCCAGATTTCTGGAAACCGAGTAATCATGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR CAA 90 bp ATTTCACTGGGATGGAAGCAGATGAACCACCCAATCAAACAGTACATGATTACTAACTGCCGGATCTCATaGCCTGAGACGAGGATGTTG +
Preference number: 5 (lower is better)
Translates to: ISLGWKQMNHPIKQYMITNCRIS*PETRML
Trigger: CAACATCCTCGTCTCAGGCAATGAGATCCGGCAGTT...AGTAATCATGTACTGTTTGATTGGGTGGTTCATCTGCTTCCATCCCAGTGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR CAA 90 bp TTCACTGGGATGGAAGCAGATGAACCACCCAATCAAACAGTACATGATTACTCGGTTCCTTGTGATTCTTaGCTTCCTCCTCTCCTCTTC +
Preference number: 5 (lower is better)
Translates to: FTGMEADEPPNQTVHDYSVPCDS*LPPLLF
Trigger: GAAGAGGAGAGGAGGAAGCAAAGAATCACAAGGAAC...CGAGTAATCATGTACTGTTTGATTGGGTGGTTCATCTGCTTCCATCCCAGTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS-3UTR CAA 90 bp ATTTCACTGGGATGGAAGCAGATGAACCACCCAATCAAACAGTACATGATTACTTACCAGGTAGTGATCTaGGAGAGGCCCACAAAAGCA +
Preference number: 5 (lower is better)
Translates to: ISLGWKQMNHPIKQYMITYQVVI*ERPTKA
Trigger: TGCTTTTGTGGGCCTCTCCAAGATCACTACCTGGTA...AGTAATCATGTACTGTTTGATTGGGTGGTTCATCTGCTTCCATCCCAGTGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS TCA 72 bp GGAGACAGTGAGGCGGGCCTCGGAGGCGCCATGCACTaGCGCCTGGCACCGTGCCTCCCGCACCTTGCCTGG +
Preference number: 6 (lower is better)
Translates to: GDSEAGLGGAMH*RLAPCLPHLAW
Trigger: CCAGGCAAGGTGCGGGAGGCACGGTGCCAGGCGTCAGTGCATGGCGCCTCCGAGGCCCGCCTCACTGTCTCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS GCA 72 bp TGCCAGGAGACAGTGAGGCGGGCCTCGGAGGCGCCATaGACTGACGCCTGGCACCGTGCCTCCCGCACCTTG +
Preference number: 6 (lower is better)
Translates to: CQETVRRASEAP*TDAWHRASRTL
Trigger: CAAGGTGCGGGAGGCACGGTGCCAGGCGTCAGTGCATGGCGCCTCCGAGGCCCGCCTCACTGTCTCCTGGCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS GCA 72 bp TGCACCCTCGCCCCAGCCCTCCATGAAGAAGAGCCGTaGCTCGTGGGCCAGGCCGGGAAACTGCCGCAGGGT +
Preference number: 6 (lower is better)
Translates to: CTLAPALHEEEP*LVGQAGKLPQG
Trigger: ACCCTGCGGCAGTTTCCCGGCCTGGCCCACGAGGCACGGCTCTTCTTCATGGAGGGCTGGGGCGAGGGTGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS CCA 72 bp GTGAGGCGGGCCTCGGAGGCGCCATGCACTGACGCCTaGCACCGTGCCTCCCGCACCTTGCCTGGATATAGG +
Preference number: 6 (lower is better)
Translates to: VRRASEAPCTDA*HRASRTLPGYR
Trigger: CCTATATCCAGGCAAGGTGCGGGAGGCACGGTGCCAGGCGTCAGTGCATGGCGCCTCCGAGGCCCGCCTCAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS CCA 72 bp CAGTGCCTTCGGGTAGTCGATCCTCAGTGCTGGGGCTaGCTCTGTGGCCTGTCGGCTGAGGGCCAGCTCCTC +
Preference number: 6 (lower is better)
Translates to: QCLRVVDPQCWG*LCGLSAEGQLL
Trigger: GAGGAGCTGGCCCTCAGCCGACAGGCCACAGAGCCAGCCCCAGCACTGAGGATCGACTACCCGAAGGCACTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS CCA 72 bp TGGTCCTCCACGGTGGATAGGTCGAGCAGGGCTGGCTaGAAGCGCCGGGAGCCCAGGTTGGGCAGCATGACA +
Preference number: 6 (lower is better)
Translates to: WSSTVDRSSRAG*KRREPRLGSMT
Trigger: TGTCATGCTGCCCAACCTGGGCTCCCGGCGCTTCCAGCCAGCCCTGCTCGACCTATCCACCGTGGAGGACCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS CCA 72 bp GTCGGGGTTGAAGCGGTTGGCGATGAGGGCCACGTCTaGCACGAACACCGGCTTGGGCATGAAGCGCAGGGC +
Preference number: 6 (lower is better)
Translates to: VGVEAVGDEGHV*HEHRLGHEAQG
Trigger: GCCCTGCGCTTCATGCCCAAGCCGGTGTTCGTGCCAGACGTGGCCCTCATCGCCAACCGCTTCAACCCCGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS GCA 72 bp ATGCTCACGCAGCCGCACATGCTTCCACAGGACCGCTaGCAGCACCGACACCAGGAGGGCGTTGAACACCGC +
Preference number: 6 (lower is better)
Translates to: MLTQPHMLPQDR*QHRHQEGVEHR
Trigger: GCGGTGTTCAACGCCCTCCTGGTGTCGGTGCTGGCAGCGGTCCTGTGGAAGCATGTGCGGCTGCGTGAGCAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS GCA 72 bp TCCTCCAGTGTGGCTGCATGCTCACGCAGCCGCACATaGTTCCACAGGACCGCTGCCAGCACCGACACCAGG +
Preference number: 6 (lower is better)
Translates to: SSSVAACSRSRT*FHRTAASTDTR
Trigger: CCTGGTGTCGGTGCTGGCAGCGGTCCTGTGGAAGCATGTGCGGCTGCGTGAGCATGCAGCCACACTGGAGGA
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS GCA 72 bp GGTCTGTGTGCGTGCGGCCCGTGCACACCATGTGTGTaGCGCCCTCCATCAGGATCTGCAGTGCCTTCGGGT +
Preference number: 6 (lower is better)
Translates to: GLCACGPCTPCV*RPPSGSAVPSG
Trigger: ACCCGAAGGCACTGCAGATCCTGATGGAGGGCGGCACACACATGGTGTGCACGGGCCGCACGCACACAGACC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS GCA 72 bp CGCACCTTGCCTGGATATAGGCCGACTGTCCACTTCTaGTTCCGTGGTCCTGGCCGGCCCTTCACCACGCGC +
Preference number: 6 (lower is better)
Translates to: RTLPGYRPTVHF*FRGPGRPFTTR
Trigger: GCGCGTGGTGAAGGGCCGGCCAGGACCACGGAAGCAGAAGTGGACAGTCGGCCTATATCCAGGCAAGGTGCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS CCA 72 bp GATCTGCAGTGCCTTCGGGTAGTCGATCCTCAGTGCTaGGGCTGGCTCTGTGGCCTGTCGGCTGAGGGCCAG +
Preference number: 6 (lower is better)
Translates to: DLQCLRVVDPQC*GWLCGLSAEGQ
Trigger: CTGGCCCTCAGCCGACAGGCCACAGAGCCAGCCCCAGCACTGAGGATCGACTACCCGAAGGCACTGCAGATC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS CAA 90 bp CCACTCGGGGTTCCGGCAACAGAGATGCCGTGGGACCTCACGGCTTaGCAGGATACGGGCTTGCTCAGCCCGGTCCAGATGGGTGATGCC +
Preference number: 6 (lower is better)
Translates to: PLGVPATEMPWDLTA*QDTGLLSPVQMGDA
Trigger: GGCATCACCCATCTGGACCGGGCTGAGCAAGCCCGTATCCTGCAAAGCCGTGAGGTCCCACGGCATCTCTGTTGCCGGAACCCCGAGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS CAA 90 bp TCGGAGGCGCCATGCACTGACGCCTGGCACCGTGCCTCCCGCACCTaGCCTGGATATAGGCCGACTGTCCACTTCTGCTTCCGTGGTCCT +
Preference number: 6 (lower is better)
Translates to: SEAPCTDAWHRASRT*PGYRPTVHFCFRGP
Trigger: AGGACCACGGAAGCAGAAGTGGACAGTCGGCCTATATCCAGGCAAGGTGCGGGAGGCACGGTGCCAGGCGTCAGTGCATGGCGCCTCCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS TCA 72 bp GGTCCTGGCCGGCCCTTCACCACGCGCCGTATGGTTTaGATGAGGGACGGGATGTCCACCTTGGTGTCCTGG +
Preference number: 6 (lower is better)
Translates to: GPGRPFTTRRMV*MRDGMSTLVSW
Trigger: CCAGGACACCAAGGTGGACATCCCGTCCCTCATTCAAACCATACGGCGCGTGGTGAAGGGCCGGCCAGGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS CAA 72 bp CACAGGACCGCTGCCAGCACCGACACCAGGAGGGCGTaGAACACCGCCGAGAGGTGCATCCTAATGCCACTG +
Preference number: 6 (lower is better)
Translates to: HRTAASTDTRRA*NTAERCILMPL
Trigger: CAGTGGCATTAGGATGCACCTCTCGGCGGTGTTCAACGCCCTCCTGGTGTCGGTGCTGGCAGCGGTCCTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS CAA 72 bp CTTCCCGAGGCCAGGCTGTGGCCTGCTCGCTACGTGTaGCACACCAGCACATCTGCAAAGGGTCCCAGGAGG +
Preference number: 6 (lower is better)
Translates to: LPEARLWPARYV*HTSTSAKGPRR
Trigger: CCTCCTGGGACCCTTTGCAGATGTGCTGGTGTGCAACACGTAGCGAGCAGGCCACAGCCTGGCCTCGGGAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS CAA 90 bp ACATGCTTCCACAGGACCGCTGCCAGCACCGACACCAGGAGGGCGTaGAACACCGCCGAGAGGTGCATCCTAATGCCACTGTGGGGCCCT +
Preference number: 6 (lower is better)
Translates to: TCFHRTAASTDTRRA*NTAERCILMPLWGP
Trigger: AGGGCCCCACAGTGGCATTAGGATGCACCTCTCGGCGGTGTTCAACGCCCTCCTGGTGTCGGTGCTGGCAGCGGTCCTGTGGAAGCATGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS CAA 90 bp TTGAAGCGGTTGGCGATGAGGGCCACGTCTGGCACGAACACCGGCTaGGGCATGAAGCGCAGGGCAGCAGCAGGCAGCTCCACGAAGTTG +
Preference number: 6 (lower is better)
Translates to: LKRLAMRATSGTNTG*GMKRRAAAGSSTKL
Trigger: CAACTTCGTGGAGCTGCCTGCTGCTGCCCTGCGCTTCATGCCCAAGCCGGTGTTCGTGCCAGACGTGGCCCTCATCGCCAACCGCTTCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS GCA 72 bp CACCATGTGTGTGCCGCCCTCCATCAGGATCTGCAGTaGCTTCGGGTAGTCGATCCTCAGTGCTGGGGCTGG +
Preference number: 6 (lower is better)
Translates to: HHVCAALHQDLQ*LRVVDPQCWGW
Trigger: CCAGCCCCAGCACTGAGGATCGACTACCCGAAGGCACTGCAGATCCTGATGGAGGGCGGCACACACATGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS GCA 72 bp CTGCTTGGGGCTGAGCAGCTTGTAGAGGTCGAAGTGTaGACCCTCGCCCCAGCCCTCCATGAAGAAGAGCCG +
Preference number: 6 (lower is better)
Translates to: LLGAEQLVEVEV*TLAPALHEEEP
Trigger: CGGCTCTTCTTCATGGAGGGCTGGGGCGAGGGTGCACACTTCGACCTCTACAAGCTGCTCAGCCCCAAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS GCA 72 bp TTCCGGCAACAGAGATGCCGTGGGACCTCACGGCTTTaGAGGATACGGGCTTGCTCAGCCCGGTCCAGATGG +
Preference number: 6 (lower is better)
Translates to: FRQQRCRGTSRL*RIRACSARSRW
Trigger: CCATCTGGACCGGGCTGAGCAAGCCCGTATCCTGCAAAGCCGTGAGGTCCCACGGCATCTCTGTTGCCGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS GCA 72 bp CATGCACTGACGCCTGGCACCGTGCCTCCCGCACCTTaGCTGGATATAGGCCGACTGTCCACTTCTGCTTCC +
Preference number: 6 (lower is better)
Translates to: HALTPGTVPPAP*LDIGRLSTSAS
Trigger: GGAAGCAGAAGTGGACAGTCGGCCTATATCCAGGCAAGGTGCGGGAGGCACGGTGCCAGGCGTCAGTGCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS GCA 72 bp TTCCCGAGGCCAGGCTGTGGCCTGCTCGCTACGTGTTaGACACCAGCACATCTGCAAAGGGTCCCAGGAGGA +
Preference number: 6 (lower is better)
Translates to: FPRPGCGLLATC*TPAHLQRVPGG
Trigger: TCCTCCTGGGACCCTTTGCAGATGTGCTGGTGTGCAACACGTAGCGAGCAGGCCACAGCCTGGCCTCGGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS CCA 72 bp GAAGAGCCACTCGGGGTTCCGGCAACAGAGATGCCGTaGGACCTCACGGCTTTGCAGGATACGGGCTTGCTC +
Preference number: 6 (lower is better)
Translates to: EEPLGVPATEMP*DLTALQDTGLL
Trigger: GAGCAAGCCCGTATCCTGCAAAGCCGTGAGGTCCCACGGCATCTCTGTTGCCGGAACCCCGAGTGGCTCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS CAA 72 bp GTTCCGGCAACAGAGATGCCGTGGGACCTCACGGCTTaGCAGGATACGGGCTTGCTCAGCCCGGTCCAGATG +
Preference number: 6 (lower is better)
Translates to: VPATEMPWDLTA*QDTGLLSPVQM
Trigger: CATCTGGACCGGGCTGAGCAAGCCCGTATCCTGCAAAGCCGTGAGGTCCCACGGCATCTCTGTTGCCGGAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS CAA 72 bp TGGTCCTGGCCGGCCCTTCACCACGCGCCGTATGGTTaGAATGAGGGACGGGATGTCCACCTTGGTGTCCTG +
Preference number: 6 (lower is better)
Translates to: WSWPALHHAPYG*NEGRDVHLGVL
Trigger: CAGGACACCAAGGTGGACATCCCGTCCCTCATTCAAACCATACGGCGCGTGGTGAAGGGCCGGCCAGGACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS CAA 72 bp CCATGCACTGACGCCTGGCACCGTGCCTCCCGCACCTaGCCTGGATATAGGCCGACTGTCCACTTCTGCTTC +
Preference number: 6 (lower is better)
Translates to: PCTDAWHRASRT*PGYRPTVHFCF
Trigger: GAAGCAGAAGTGGACAGTCGGCCTATATCCAGGCAAGGTGCGGGAGGCACGGTGCCAGGCGTCAGTGCATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS CAA 90 bp GGGCCCTGGGGCTGCACAAAGCCATACTGGTACCAGGTAGTGATCTaGGAGAGGCCCACAAAAGCATGGGAGAAGCACAGCAGCCGGCCC +
Preference number: 6 (lower is better)
Translates to: GPWGCTKPYWYQVVI*ERPTKAWEKHSSRP
Trigger: GGGCCGGCTGCTGTGCTTCTCCCATGCTTTTGTGGGCCTCTCCAAGATCACTACCTGGTACCAGTATGGCTTTGTGCAGCCCCAGGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS CAA 90 bp CTGCTTCCGTGGTCCTGGCCGGCCCTTCACCACGCGCCGTATGGTTaGAATGAGGGACGGGATGTCCACCTTGGTGTCCTGGTAGATTCG +
Preference number: 6 (lower is better)
Translates to: LLPWSWPALHHAPYG*NEGRDVHLGVLVDS
Trigger: CGAATCTACCAGGACACCAAGGTGGACATCCCGTCCCTCATTCAAACCATACGGCGCGTGGTGAAGGGCCGGCCAGGACCACGGAAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS CAA 90 bp AGGAGCCACCTTCCCGAGGCCAGGCTGTGGCCTGCTCGCTACGTGTaGCACACCAGCACATCTGCAAAGGGTCCCAGGAGGATCTTGTTG +
Preference number: 6 (lower is better)
Translates to: RSHLPEARLWPARYV*HTSTSAKGPRRILL
Trigger: CAACAAGATCCTCCTGGGACCCTTTGCAGATGTGCTGGTGTGCAACACGTAGCGAGCAGGCCACAGCCTGGCCTCGGGAAGGTGGCTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS TCA 72 bp CTGGCCGGCCCTTCACCACGCGCCGTATGGTTTGAATaGGGGACGGGATGTCCACCTTGGTGTCCTGGTAGA +
Preference number: 6 (lower is better)
Translates to: LAGPSPRAVWFE*GTGCPPWCPGR
Trigger: TCTACCAGGACACCAAGGTGGACATCCCGTCCCTCATTCAAACCATACGGCGCGTGGTGAAGGGCCGGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS GCA 72 bp ATTCGGAAGAGCCACTCGGGGTTCCGGCAACAGAGATaGCGTGGGACCTCACGGCTTTGCAGGATACGGGCT +
Preference number: 6 (lower is better)
Translates to: IRKSHSGFRQQR*RGTSRLCRIRA
Trigger: AGCCCGTATCCTGCAAAGCCGTGAGGTCCCACGGCATCTCTGTTGCCGGAACCCCGAGTGGCTCTTCCGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS TCA 72 bp TGTCATGAACCGTGCAAACTGCCGGATCTCATTGCCTaGGACGAGGATGTTGGCCTTCGGGCCCTGGGGCTG +
Preference number: 6 (lower is better)
Translates to: CHEPCKLPDLIA*DEDVGLRALGL
Trigger: CAGCCCCAGGGCCCGAAGGCCAACATCCTCGTCTCAGGCAATGAGATCCGGCAGTTTGCACGGTTCATGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS GCA 72 bp ACCGACACCAGGAGGGCGTTGAACACCGCCGAGAGGTaGATCCTAATGCCACTGTGGGGCCCTAATGAGATG +
Preference number: 6 (lower is better)
Translates to: TDTRRALNTAER*ILMPLWGPNEM
Trigger: CATCTCATTAGGGCCCCACAGTGGCATTAGGATGCACCTCTCGGCGGTGTTCAACGCCCTCCTGGTGTCGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS GCA 72 bp GGGATTGACAGCATATGGGAAGAGCTCTACCACAGTTaGCCCACGGGGCAGGAAGAGGGTGGTGACCAGCTG +
Preference number: 6 (lower is better)
Translates to: GIDSIWEELYHS*PTGQEEGGDQL
Trigger: CAGCTGGTCACCACCCTCTTCCTGCCCCGTGGGGCAACTGTGGTAGAGCTCTTCCCATATGCTGTCAATCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS CCA 72 bp GGCCAGGCCGGGAAACTGCCGCAGGGTGTAGAAGAGTaGCAGCAGGTCGTCATGAAAGACGTGCATGAGGTT +
Preference number: 6 (lower is better)
Translates to: GQAGKLPQGVEE*QQVVMKDVHEV
Trigger: AACCTCATGCACGTCTTTCATGACGACCTGCTGCCACTCTTCTACACCCTGCGGCAGTTTCCCGGCCTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS CAA 72 bp GCAAACTGCCGGATCTCATTGCCTGAGACGAGGATGTaGGCCTTCGGGCCCTGGGGCTGCACAAAGCCATAC +
Preference number: 6 (lower is better)
Translates to: ANCRISLPETRM*AFGPWGCTKPY
Trigger: GTATGGCTTTGTGCAGCCCCAGGGCCCGAAGGCCAACATCCTCGTCTCAGGCAATGAGATCCGGCAGTTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS CAA 90 bp ATGAACCGTGCAAACTGCCGGATCTCATTGCCTGAGACGAGGATGTaGGCCTTCGGGCCCTGGGGCTGCACAAAGCCATACTGGTACCAG +
Preference number: 6 (lower is better)
Translates to: MNRANCRISLPETRM*AFGPWGCTKPYWYQ
Trigger: CTGGTACCAGTATGGCTTTGTGCAGCCCCAGGGCCCGAAGGCCAACATCCTCGTCTCAGGCAATGAGATCCGGCAGTTTGCACGGTTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS TCA 72 bp AGGGCAGCAGCAGGCAGCTCCACGAAGTTGAAGTACTaGGTGTTGTGGTCCTCCACGGTGGATAGGTCGAGC +
Preference number: 6 (lower is better)
Translates to: RAAAGSSTKLKY*VLWSSTVDRSS
Trigger: GCTCGACCTATCCACCGTGGAGGACCACAACACTCAGTACTTCAACTTCGTGGAGCTGCCTGCTGCTGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS CCA 72 bp TTGAACACCGCCGAGAGGTGCATCCTAATGCCACTGTaGGGCCCTAATGAGATGACGGCCACTGGGAAGCAC +
Preference number: 6 (lower is better)
Translates to: LNTAERCILMPL*GPNEMTATGKH
Trigger: GTGCTTCCCAGTGGCCGTCATCTCATTAGGGCCCCACAGTGGCATTAGGATGCACCTCTCGGCGGTGTTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS CCA 72 bp TCATTGCCTGAGACGAGGATGTTGGCCTTCGGGCCCTaGGGCTGCACAAAGCCATACTGGTACCAGGTAGTG +
Preference number: 6 (lower is better)
Translates to: SLPETRMLAFGP*GCTKPYWYQVV
Trigger: CACTACCTGGTACCAGTATGGCTTTGTGCAGCCCCAGGGCCCGAAGGCCAACATCCTCGTCTCAGGCAATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS CCA 72 bp CAAACTGCCGGATCTCATTGCCTGAGACGAGGATGTTaGCCTTCGGGCCCTGGGGCTGCACAAAGCCATACT +
Preference number: 6 (lower is better)
Translates to: QTAGSHCLRRGC*PSGPGAAQSHT
Trigger: AGTATGGCTTTGTGCAGCCCCAGGGCCCGAAGGCCAACATCCTCGTCTCAGGCAATGAGATCCGGCAGTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS CCA 72 bp GCCAGGCTACATACTGGAGGTCCATGCCAGGCAGCATaGCCAGCGTCTTATAGGGAGTGTAGTGGTCGGGAT +
Preference number: 6 (lower is better)
Translates to: ARLHTGGPCQAA*PASYRECSGRD
Trigger: ATCCCGACCACTACACTCCCTATAAGACGCTGGCCATGCTGCCTGGCATGGACCTCCAGTATGTAGCCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS CCA 72 bp ATCCCAGGGCCGCTCAGGGTGTGTGACTGTGTTCTCTaGCATCATGTTCCGCCAGGCTACATACTGGAGGTC +
Preference number: 6 (lower is better)
Translates to: IPGPLRVCDCVL*HHVPPGYILEV
Trigger: GACCTCCAGTATGTAGCCTGGCGGAACATGATGCCAGAGAACACAGTCACACACCCTGAGCGGCCCTGGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS CAA 90 bp ACGTTCAGCTTTTCTGTCATGAACCGTGCAAACTGCCGGATCTCATaGCCTGAGACGAGGATGTTGGCCTTCGGGCCCTGGGGCTGCACA +
Preference number: 6 (lower is better)
Translates to: TFSFSVMNRANCRIS*PETRMLAFGPWGCT
Trigger: TGTGCAGCCCCAGGGCCCGAAGGCCAACATCCTCGTCTCAGGCAATGAGATCCGGCAGTTTGCACGGTTCATGACAGAAAAGCTGAACGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS GCA 72 bp GCATCATGTTCCGCCAGGCTACATACTGGAGGTCCATaGCAGGCAGCATGGCCAGCGTCTTATAGGGAGTGT +
Preference number: 6 (lower is better)
Translates to: ASCSARLHTGGP*QAAWPASYREC
Trigger: ACACTCCCTATAAGACGCTGGCCATGCTGCCTGGCATGGACCTCCAGTATGTAGCCTGGCGGAACATGATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS CCA 72 bp TTGGCCTTCGGGCCCTGGGGCTGCACAAAGCCATACTaGTACCAGGTAGTGATCTTGGAGAGGCCCACAAAA +
Preference number: 6 (lower is better)
Translates to: LAFGPWGCTKPY*YQVVILERPTK
Trigger: TTTTGTGGGCCTCTCCAAGATCACTACCTGGTACCAGTATGGCTTTGTGCAGCCCCAGGGCCCGAAGGCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS CCA 72 bp GCATTGCTGACCAGCCGCACGACATCAGCAAAGGTGTaGTCCTCCAGGGACACTGTCACTGTCTTCATCTGG +
Preference number: 6 (lower is better)
Translates to: ALLTSRTTSAKV*SSRDTVTVFIW
Trigger: CCAGATGAAGACAGTGACAGTGTCCCTGGAGGACCACACCTTTGCTGATGTCGTGCGGCTGGTCAGCAATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS CCA 72 bp GTGTTCTCTGGCATCATGTTCCGCCAGGCTACATACTaGAGGTCCATGCCAGGCAGCATGGCCAGCGTCTTA +
Preference number: 6 (lower is better)
Translates to: VFSGIMFRQATY*RSMPGSMASVL
Trigger: TAAGACGCTGGCCATGCTGCCTGGCATGGACCTCCAGTATGTAGCCTGGCGGAACATGATGCCAGAGAACAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS CCA 72 bp CTTCACCTCCCTCACCTTCAGGTATTTAAGGTTCCATaGGATCTGCCAGGAGACAGTGAGGCGGGCCTCGGA +
Preference number: 6 (lower is better)
Translates to: LHLPHLQVFKVP*DLPGDSEAGLG
Trigger: TCCGAGGCCCGCCTCACTGTCTCCTGGCAGATCCCATGGAACCTTAAATACCTGAAGGTGAGGGAGGTGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS GCA 72 bp GGTATGGACAGTTCTTCTCAAGAGAGGACACCTGCGTaGCCAGTAAGACATGCCCTCAGCTGGAGTTCCGAC +
Preference number: 6 (lower is better)
Translates to: GMDSSSQERTPA*PVRHALSWSSD
Trigger: GTCGGAACTCCAGCTGAGGGCATGTCTTACTGGGCACGCAGGTGTCCTCTCTTGAGAAGAACTGTCCATACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441964.1
CDS CCA 72 bp CTTATAGGGAGTGTAGTGGTCGGGATTGACAGCATATaGGAAGAGCTCTACCACAGTTGCCCCACGGGGCAG +
Preference number: 6 (lower is better)
Translates to: LIGSVVVGIDSI*EELYHSCPTGQ
Trigger: CTGCCCCGTGGGGCAACTGTGGTAGAGCTCTTCCCATATGCTGTCAATCCCGACCACTACACTCCCTATAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS CAA 72 bp TTTTCTGTCATGAACCGTGCAAACTGCCGGATCTCATaGCCTGAGACGAGGATGTTGGCCTTCGGGCCCTGG +
Preference number: 6 (lower is better)
Translates to: FSVMNRANCRIS*PETRMLAFGPW
Trigger: CCAGGGCCCGAAGGCCAACATCCTCGTCTCAGGCAATGAGATCCGGCAGTTTGCACGGTTCATGACAGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS TCA 72 bp TGGCCAGCGTCTTATAGGGAGTGTAGTGGTCGGGATTaGCAGCATATGGGAAGAGCTCTACCACAGTTGCCC +
Preference number: 6 (lower is better)
Translates to: WPASYRECSGRD*QHMGRALPQLP
Trigger: GGGCAACTGTGGTAGAGCTCTTCCCATATGCTGTCAATCCCGACCACTACACTCCCTATAAGACGCTGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS GCA 72 bp TTCTCAAGAGAGGACACCTGCGTGCCCAGTAAGACATaGCCTCAGCTGGAGTTCCGACATCTGATCTCTAGG +
Preference number: 6 (lower is better)
Translates to: FSREDTCVPSKT*PQLEFRHLISR
Trigger: CCTAGAGATCAGATGTCGGAACTCCAGCTGAGGGCATGTCTTACTGGGCACGCAGGTGTCCTCTCTTGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441964.1
CDS GCA 72 bp CCATGGTATGGACAGTTCTTCTCAAGAGAGGACACCTaGGTGCCCAGTAAGACATGCCCTCAGCTGGAGTTC +
Preference number: 6 (lower is better)
Translates to: PWYGQFFSREDT*VPSKTCPQLEF
Trigger: GAACTCCAGCTGAGGGCATGTCTTACTGGGCACGCAGGTGTCCTCTCTTGAGAAGAACTGTCCATACCATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441964.1
CDS CCA 72 bp ACCAGAATGTACTCCTCGCCTAGGGGGACTCCTGTGTaGCTCACGTTCAGCTTTTCTGTCATGAACCGTGCA +
Preference number: 6 (lower is better)
Translates to: TRMYSSPRGTPV*LTFSFSVMNRA
Trigger: TGCACGGTTCATGACAGAAAAGCTGAACGTGAGCCACACAGGAGTCCCCCTAGGCGAGGAGTACATTCTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS CAA 72 bp GGCTGCACAAAGCCATACTGGTACCAGGTAGTGATCTaGGAGAGGCCCACAAAAGCATGGGAGAAGCACAGC +
Preference number: 6 (lower is better)
Translates to: GCTKPYWYQVVI*ERPTKAWEKHS
Trigger: GCTGTGCTTCTCCCATGCTTTTGTGGGCCTCTCCAAGATCACTACCTGGTACCAGTATGGCTTTGTGCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS GCA 72 bp CTCACGTTCAGCTTTTCTGTCATGAACCGTGCAAACTaGCGGATCTCATTGCCTGAGACGAGGATGTTGGCC +
Preference number: 6 (lower is better)
Translates to: LTFSFSVMNRAN*RISLPETRMLA
Trigger: GGCCAACATCCTCGTCTCAGGCAATGAGATCCGGCAGTTTGCACGGTTCATGACAGAAAAGCTGAACGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1
CDS CCA 72 bp CTGAGAACTGGTGAAAGCCTTACCACCACCATGGTATaGACAGTTCTTCTCAAGAGAGGACACCTGCGTGCC +
Preference number: 6 (lower is better)
Translates to: LRTGESLTTTMV*TVLLKRGHLRA
Trigger: GGCACGCAGGTGTCCTCTCTTGAGAAGAACTGTCCATACCATGGTGGTGGTAAGGCTTTCACCAGTTCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441964.1
CDS CCA 72 bp AGCAGCAGCTCTGCCTCATTCAGAATGAGTCTGTTCTaGGTTCGGCTAAAGACCAGAATGTACTCCTCGCCT +
Preference number: 6 (lower is better)
Translates to: SSSSASFRMSLF*VRLKTRMYSSP
Trigger: AGGCGAGGAGTACATTCTGGTCTTTAGCCGAACCCAGAACAGACTCATTCTGAATGAGGCAGAGCTGCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344697.3
ENST00000441964.1