RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for POLR3E (Homo sapiens)

Ensembl gene IDs: ENSG00000058600

Ensembl transcript IDs: ENST00000299853.10, ENST00000359210.8, ENST00000418581.6, ENST00000561494.5, ENST00000563024.5, ENST00000563282.1, ENST00000563766.5, ENST00000564061.5, ENST00000564209.5, ENST00000564256.1, ENST00000564750.5, ENST00000564883.5, ENST00000565117.1, ENST00000565358.5, ENST00000565551.5, ENST00000567022.5, ENST00000569757.1, ENST00000569787.1, ENST00000615879.4, ENST00000639550.2, ENST00000640588.2

Found 1228 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCTGCTCCTCGTCCTCCTCGCCCTCCTCGCTCACGGGCTCCTCCTTaGTCCGCACACCGGGCGGGACCGCAGGCACCCGCAGCTGCTCCT +
Preference number: 1 (lower is better)
Translates to: PAPRPPRPPRSRAPP*SAHRAGPQAPAAAP
Trigger: AGGAGCAGCTGCGGGTGCCTGCGGTCCCGCCCGGTGTGCGGATCAAGGAGGAGCCCGTGAGCGAGGAGGGCGAGGAGGACGAGGAGCAGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564750.5
3UTR CCA 90 bp ACGAAGGCCTTCAGTTCCCGAGCCACAGGGGTGCTGGCGCAGCCCTaGGGCGGGTGCCCGTTGAAGCTGTCTGTGCCCGCAGCCCGCCCG +
Preference number: 1 (lower is better)
Translates to: TKAFSSRATGVLAQP*GGCPLKLSVPAARP
Trigger: CGGGCGGGCTGCGGGCACAGACAGCTTCAACGGGCACCCGCCCCAGGGCTGCGCCAGCACCCCTGTGGCTCGGGAACTGAAGGCCTTCGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564750.5
3UTR GCA 90 bp TGTCTGTGCCCGCAGCCCGCCCGAGAGGCAGCCCGTTGGCCAGCTTaGTGTGGAGGCCGCTGGGGGAAGTGTCCATGGGCTCCTCCTCCG +
Preference number: 1 (lower is better)
Translates to: CLCPQPAREAARWPA*CGGRWGKCPWAPPP
Trigger: CGGAGGAGGAGCCCATGGACACTTCCCCCAGCGGCCTCCACAGCAAGCTGGCCAACGGGCTGCCTCTCGGGCGGGCTGCGGGCACAGACA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564750.5
3UTR GCA 90 bp TGGAGGCCGCTGGGGGAAGTGTCCATGGGCTCCTCCTCCGCCTCCTaGTCCTCGTCCTCCTCGCCCTCCTCGCTCACGGGCTCCTCCTTG +
Preference number: 1 (lower is better)
Translates to: WRPLGEVSMGSSSAS*SSSSSPSSLTGSSL
Trigger: CAAGGAGGAGCCCGTGAGCGAGGAGGGCGAGGAGGACGAGGAGCAGGAGGCGGAGGAGGAGCCCATGGACACTTCCCCCAGCGGCCTCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564750.5
3UTR CCA 90 bp GCCCGTTGGCCAGCTTGCTGTGGAGGCCGCTGGGGGAAGTGTCCATaGGCTCCTCCTCCGCCTCCTGCTCCTCGTCCTCCTCGCCCTCCT +
Preference number: 1 (lower is better)
Translates to: ARWPACCGGRWGKCP*APPPPPAPRPPRPP
Trigger: AGGAGGGCGAGGAGGACGAGGAGCAGGAGGCGGAGGAGGAGCCCATGGACACTTCCCCCAGCGGCCTCCACAGCAAGCTGGCCAACGGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564750.5
3UTR CCA 90 bp GTGAAGAGTCCCCTGCCTCGTTGGCCGCCTCCCTCTCCCGGTGCTTaGCGTCAGCCTTATCCAGGTAGGAGAAGCTGGGCCGCAGCTGCA +
Preference number: 1 (lower is better)
Translates to: VKSPLPRWPPPSPGA*RQPYPGRRSWAAAA
Trigger: TGCAGCTGCGGCCCAGCTTCTCCTACCTGGATAAGGCTGACGCCAAGCACCGGGAGAGGGAGGCGGCCAACGAGGCAGGGGACTCTTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564750.5
3UTR TCA 90 bp CTGCAGGAACTCATAGGACTGCACACGGCGCTGGCGGGCCTGCTCTaGCTCCGGCCGGGAGAACCGCACCGTGATCTGCTTAACATCGTC +
Preference number: 1 (lower is better)
Translates to: LQELIGLHTALAGLL*LRPGEPHRDLLNIV
Trigger: GACGATGTTAAGCAGATCACGGTGCGGTTCTCCCGGCCGGAGTCAGAGCAGGCCCGCCAGCGCCGTGTGCAGTCCTATGAGTTCCTGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564750.5
ENST00000565551.5
3UTR CCA 90 bp CTCGGCCCCTGCAGAGCACCTCAGCAGGCACGCCGCTGTGAGGGCTaGACGAGTCCTTGGGGTATAGGATGTCACTCTTCACCACCCAGT +
Preference number: 1 (lower is better)
Translates to: LGPCRAPQQARRCEG*TSPWGIGCHSSPPS
Trigger: ACTGGGTGGTGAAGAGTGACATCCTATACCCCAAGGACTCGTCCAGCCCTCACAGCGGCGTGCCTGCTGAGGTGCTCTGCAGGGGCCGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564750.5
3UTR GCA 90 bp TCTTCACCACCCAGTTCCCTTGGACCAACATCGCCACCTTCTGGATaGCCCGCAGAACAGCCACGGAATCGATGGAGGGGCCCAGGAGGC +
Preference number: 1 (lower is better)
Translates to: SSPPSSLGPTSPPSG*PAEQPRNRWRGPGG
Trigger: GCCTCCTGGGCCCCTCCATCGATTCCGTGGCTGTTCTGCGGGGCATCCAGAAGGTGGCGATGTTGGTCCAAGGGAACTGGGTGGTGAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564750.5
3UTR CCA 90 bp CCCTCTCCCGGTGCTTGGCGTCAGCCTTATCCAGGTAGGAGAAGCTaGGCCGCAGCTGCAGGATGCCATGTAAAGGTGTCAGGTGGAGCT +
Preference number: 1 (lower is better)
Translates to: PSPGAWRQPYPGRRS*AAAAGCHVKVSGGA
Trigger: AGCTCCACCTGACACCTTTACATGGCATCCTGCAGCTGCGGCCCAGCTTCTCCTACCTGGATAAGGCTGACGCCAAGCACCGGGAGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564750.5
3UTR CCA 90 bp TCACTCTTCACCACCCAGTTCCCTTGGACCAACATCGCCACCTTCTaGATGCCCCGCAGAACAGCCACGGAATCGATGGAGGGGCCCAGG +
Preference number: 1 (lower is better)
Translates to: SLFTTQFPWTNIATF*MPRRTATESMEGPR
Trigger: CCTGGGCCCCTCCATCGATTCCGTGGCTGTTCTGCGGGGCATCCAGAAGGTGGCGATGTTGGTCCAAGGGAACTGGGTGGTGAAGAGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564750.5
3UTR GCA 90 bp ACTGTCCCTCAGGCCATAGTAATGCAGGTGGACCCAGGGCTCCTCTaGGTGCTTCTTCTGCAGGAACTCATAGGACTGCACACGGCGCTG +
Preference number: 1 (lower is better)
Translates to: TVPQAIVMQVDPGLL*VLLLQELIGLHTAL
Trigger: CAGCGCCGTGTGCAGTCCTATGAGTTCCTGCAGAAGAAGCACGCAGAGGAGCCCTGGGTCCACCTGCATTACTATGGCCTGAGGGACAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564750.5
ENST00000565551.5
3UTR GCA 90 bp CGTCAGCCTTATCCAGGTAGGAGAAGCTGGGCCGCAGCTGCAGGATaGCATGTAAAGGTGTCAGGTGGAGCTCACCTTGCCTGTAGAGTG +
Preference number: 1 (lower is better)
Translates to: RQPYPGRRSWAAAAG*HVKVSGGAHLACRV
Trigger: CACTCTACAGGCAAGGTGAGCTCCACCTGACACCTTTACATGGCATCCTGCAGCTGCGGCCCAGCTTCTCCTACCTGGATAAGGCTGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564750.5
3UTR GCA 90 bp GGCAGAATGAACTCCCAGCCTTTGTTGATCCTCACCACGGCCATGTaGTCCAGGAAGTCCTTCACATCCTCGGCGCAGAGTTTGGTCACG +
Preference number: 1 (lower is better)
Translates to: GRMNSQPLLILTTAM*SRKSFTSSAQSLVT
Trigger: CGTGACCAAACTCTGCGCCGAGGATGTGAAGGACTTCCTGGAGCACATGGCCGTGGTGAGGATCAACAAAGGCTGGGAGTTCATTCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564750.5
3UTR CCA 90 bp CGTCCACGTTCAGCGCAATCTGCTCCCCTTTGCTGCGGCAATAGTTaGGGTTCAGGGTGTCGATGGCCATCTCAAGCTCTACCTTCTGCT +
Preference number: 1 (lower is better)
Translates to: RPRSAQSAPLCCGNS*GSGCRWPSQALPSA
Trigger: AGCAGAAGGTAGAGCTTGAGATGGCCATCGACACCCTGAACCCCAACTATTGCCGCAGCAAAGGGGAGCAGATTGCGCTGAACGTGGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561494.5
3UTR GCA 90 bp ACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTaGTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCC +
Preference number: 1 (lower is better)
Translates to: TAPCNATGHEMVSSS*SVSSEASRGPTSGS
Trigger: GGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
3UTR CCA 90 bp AATCCCTTCTGTCCACTGCACCGTGCAATGCCACAGGTCATGAGATaGTCAGTTCCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCC +
Preference number: 1 (lower is better)
Translates to: NPFCPLHRAMPQVMR*SVPLALCRLKQVEA
Trigger: GGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGTGGACAGAAGGGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
3UTR TCA 90 bp AGGTCCCAGCTGGTCTCTTCTGGGAGTGATCTAACTAACTTAAGCTaGCCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACC +
Preference number: 1 (lower is better)
Translates to: RSQLVSSGSDLTNLS*PCDWLRIIPSVHCT
Trigger: GGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGGTCAGCTTAAGTTAGTTAGATCACTCCCAGAAGAGACCAGCTGGGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
3UTR CCA 90 bp AGACCAGCCCGGCAGGCCCTGATTGTGCATCCGGCTTCTTTGGCATaGTTTCCTTTACAAGATTATAGACTTTTTCCAGTTTGGCCTGGA +
Preference number: 1 (lower is better)
Translates to: RPARQALIVHPASLA*FPLQDYRLFPVWPG
Trigger: TCCAGGCCAAACTGGAAAAAGTCTATAATCTTGTAAAGGAAACCATGCCAAAGAAGCCGGATGCACAATCAGGGCCTGCCGGGCTGGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564750.5
3UTR TCA 90 bp AGCTTACACAGCAGTCCTTTAGTACTTTATCCACCTCCTGTTTACTaGGATCTTCTCCACACTCTTGAGTCAACCGAGACTGGATCATGT +
Preference number: 1 (lower is better)
Translates to: SLHSSPLVLYPPPVY*DLLHTLESTETGSC
Trigger: ACATGATCCAGTCTCGGTTGACTCAAGAGTGTGGAGAAGATCTCAGTAAACAGGAGGTGGATAAAGTACTAAAGGACTGCTGTGTAAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564750.5
3UTR CAA 90 bp CTGTCTGTGCCCGCAGCCCGCCCGAGAGGCAGCCCGTTGGCCAGCTaGCTGTGGAGGCCGCTGGGGGAAGTGTCCATGGGCTCCTCCTCC +
Preference number: 2 (lower is better)
Translates to: LSVPAARPRGSPLAS*LWRPLGEVSMGSSS
Trigger: GGAGGAGGAGCCCATGGACACTTCCCCCAGCGGCCTCCACAGCAAGCTGGCCAACGGGCTGCCTCTCGGGCGGGCTGCGGGCACAGACAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564750.5
3UTR-3UTR TCA 90 bp GCAGCGTGCGCAGCTGGGCCATCGACAGGACGTTGCTGGGGGCCACAGGCTTGTCTGGCGGGCCTGCTCTaGCTCCGGCCGGGAGAACCG +
Preference number: 2 (lower is better)
Translates to: AACAAGPSTGRCWGPQACLAGLL*LRPGEP
Trigger: CGGTTCTCCCGGCCGGAGTCAGAGCAGGCCCGCCAG...ACAAGCCTGTGGCCCCCAGCAACGTCCTGTCGATGGCCCAGCTGCGCACGCTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000564750.5
ENST00000565551.5
3UTR-3UTR TCA 90 bp CCGCAGCCCGCCCGAGAGGCAGCCCGTTGGCCAGCTTGCTGTGGAGGCCGCTGGATCAGGATCTTGATCTaGTCGGCCAGGGGCAGCGTG +
Preference number: 2 (lower is better)
Translates to: PQPAREAARWPACCGGRWIRILI*SARGSV
Trigger: CACGCTGCCCCTGGCCGATCAGATCAAGATCCTGAT...CCAGCGGCCTCCACAGCAAGCTGGCCAACGGGCTGCCTCTCGGGCGGGCTGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564750.5
3UTR-3UTR TCA 90 bp GAGGCGCTTGAGTTCGCTCAGCGTGAGCACAAACTGTCTCTGAAAGGTGGCCTCCTGGCGGGCCTGCTCTaGCTCCGGCCGGGAGAACCG +
Preference number: 2 (lower is better)
Translates to: EALEFAQREHKLSLKGGLLAGLL*LRPGEP
Trigger: CGGTTCTCCCGGCCGGAGTCAGAGCAGGCCCGCCAG...GAGGCCACCTTTCAGAGACAGTTTGTGCTCACGCTGAGCGAACTCAAGCGCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564750.5
3UTR-3UTR CCA 90 bp GGCACCAGTATCTGCTTGCAACCGGCGGCCAGCACCGTGTCCTGTAGCATGCGGTGCTGTGGAGGCCGCTaGGGGAAGTGTCCATGGGCT +
Preference number: 2 (lower is better)
Translates to: GTSICLQPAASTVSCSMRCCGGR*GKCPWA
Trigger: AGCCCATGGACACTTCCCCCAGCGGCCTCCACAGCA...CCGCATGCTACAGGACACGGTGCTGGCCGCCGGTTGCAAGCAGATACTGGTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564750.5
3UTR-3UTR CCA 90 bp GGCACCAGTATCTGCTTGCAACCGGCGGCCAGCACCGTGTCCTGTAGCATGCGGTTGGCCAGCTTGCTGTaGAGGCCGCTGGGGGAAGTG +
Preference number: 2 (lower is better)
Translates to: GTSICLQPAASTVSCSMRLASLL*RPLGEV
Trigger: CACTTCCCCCAGCGGCCTCCACAGCAAGCTGGCCAA...CCGCATGCTACAGGACACGGTGCTGGCCGCCGGTTGCAAGCAGATACTGGTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564750.5
3UTR-3UTR TCA 90 bp CTGGGTGACTTGACGAGCTCCGTGTTCTCCACCCCGCTTGAGCCGGGGCACAGCTTCCGCCTCATCCTGTaGAGAGTCCCCTGCCTCGTT +
Preference number: 2 (lower is better)
Translates to: LGDLTSSVFSTPLEPGHSFRLIL*RVPCLV
Trigger: AACGAGGCAGGGGACTCTTCACAGGATGAGGCGGAA...GCTGTGCCCCGGCTCAAGCGGGGTGGAGAACACGGAGCTCGTCAAGTCACCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000564750.5
ENST00000565551.5
3UTR-3UTR TCA 90 bp GGCACCAGTATCTGCTTGCAACCGGCGGCCAGCACCGTGTCCTGTAGCATGCGGGGGCACAGCAGGTACTaGCGCTCATGCTCAGAGCGA +
Preference number: 2 (lower is better)
Translates to: GTSICLQPAASTVSCSMRGHSRY*RSCSER
Trigger: TCGCTCTGAGCATGAGCGTCAGTACCTGCTGTGCCC...CCGCATGCTACAGGACACGGTGCTGGCCGCCGGTTGCAAGCAGATACTGGTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564750.5
3UTR-3UTR GCA 90 bp GGCACCAGTATCTGCTTGCAACCGGCGGCCAGCACCGTGTCCTGTAGCATGCGGCCATCGACAGGACGTTaGTGGGGGCCACAGGCTTGT +
Preference number: 2 (lower is better)
Translates to: GTSICLQPAASTVSCSMRPSTGR*WGPQAC
Trigger: ACAAGCCTGTGGCCCCCAGCAACGTCCTGTCGATGG...CCGCATGCTACAGGACACGGTGCTGGCCGCCGGTTGCAAGCAGATACTGGTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564750.5
3UTR-3UTR CCA 90 bp CTGGGTGGCATCAGCATCATCAGGTACTCACTGGGTGACTTGACGAGCTCCGTGGACTGCACACGGCGCTaGCGGGCCTGCTCTGACTCC +
Preference number: 2 (lower is better)
Translates to: LGGISIIRYSLGDLTSSVDCTRR*RACSDS
Trigger: GGAGTCAGAGCAGGCCCGCCAGCGCCGTGTGCAGTC...CACGGAGCTCGTCAAGTCACCCAGTGAGTACCTGATGATGCTGATGCCACCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564750.5
ENST00000565551.5
3UTR-3UTR TCA 90 bp CAGCTTCGAGGAATACGTGCTGGTCTCGTCGGCGCAGGCCCCGTCCACGTTCAGGGGCTTGATCTTGGCTaGGAGGTGCGGAATGTCATC +
Preference number: 2 (lower is better)
Translates to: QLRGIRAGLVGAGPVHVQGLDLG*EVRNVI
Trigger: GATGACATTCCGCACCTCTCAGCCAAGATCAAGCCC...CTGAACGTGGACGGGGCCTGCGCCGACGAGACCAGCACGTATTCCTCGAAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561494.5
3UTR-3UTR GCA 90 bp TGCCTCGTTGGCCGCCTCCCTCTCCCGGTGCTTGGCGTCAGCCTTATCCAGGTAAAGCTGGGCCGCAGCTaGAGGATGCCATGTAAAGGT +
Preference number: 2 (lower is better)
Translates to: CLVGRLPLPVLGVSLIQVKLGRS*RMPCKG
Trigger: ACCTTTACATGGCATCCTGCAGCTGCGGCCCAGCTT...TACCTGGATAAGGCTGACGCCAAGCACCGGGAGAGGGAGGCGGCCAACGAGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564750.5
3UTR-3UTR CCA 90 bp GGTACTGACGCTCATGCTCAGAGCGACTGTCCCTCAGGCCATAGTAATGCAGGTAGTCCCCTGCCTCGTTaGCCGCCTCCCTCTCCCGGT +
Preference number: 2 (lower is better)
Translates to: GTDAHAQSDCPSGHSNAGSPLPR*PPPSPG
Trigger: ACCGGGAGAGGGAGGCGGCCAACGAGGCAGGGGACT...ACCTGCATTACTATGGCCTGAGGGACAGTCGCTCTGAGCATGAGCGTCAGTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564750.5
ENST00000565551.5
3UTR-3UTR CCA 90 bp CAGGTACTGACGCTCATGCTCAGAGCGACTGTCCCTCAGGCCATAGTAATGCAGAGTCCCCTGCCTCGTTaGCCGCCTCCCTCTCCCGGT +
Preference number: 2 (lower is better)
Translates to: QVLTLMLRATVPQAIVMQSPLPR*PPPSPG
Trigger: ACCGGGAGAGGGAGGCGGCCAACGAGGCAGGGGACT...CTGCATTACTATGGCCTGAGGGACAGTCGCTCTGAGCATGAGCGTCAGTACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564750.5
ENST00000565551.5
3UTR-3UTR CCA 90 bp CCAGTATCTGCTTGCAACCGGCGGCCAGCACCGTGTCCTGTAGCATGCGGTCCGTCTTTCTCCTCCTCCTaGCTGGGTGGCATCAGCATC +
Preference number: 2 (lower is better)
Translates to: PVSACNRRPAPCPVACGPSFSSS*LGGISI
Trigger: GATGCTGATGCCACCCAGCCAGGAGGAGGAGAAAGA...CGGACCGCATGCTACAGGACACGGTGCTGGCCGCCGGTTGCAAGCAGATACTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564750.5
3UTR-3UTR GCA 90 bp GTCGGCGCAGGCCCCGTCCACGTTCAGCGCAATCTGCTCCCCTTTGCTGCGGCATCAAGCTCTACCTTCTaGTGCTTGGGCTTGATCTTG +
Preference number: 2 (lower is better)
Translates to: VGAGPVHVQRNLLPFAAASSSTF*CLGLIL
Trigger: CAAGATCAAGCCCAAGCAGCAGAAGGTAGAGCTTGA...TGCCGCAGCAAAGGGGAGCAGATTGCGCTGAACGTGGACGGGGCCTGCGCCGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561494.5
3UTR-3UTR GCA 90 bp GAGGCGCTTGAGTTCGCTCAGCGTGAGCACAAACTGTCTCTGAAAGGTGGCCTCCCCGTCCACAGCATGTaGTGCCGCTGGACCACATCC +
Preference number: 2 (lower is better)
Translates to: EALEFAQREHKLSLKGGLPVHSM*CRWTTS
Trigger: GGATGTGGTCCAGCGGCAGCACATGCTGTGGACGGG...GAGGCCACCTTTCAGAGACAGTTTGTGCTCACGCTGAGCGAACTCAAGCGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564750.5
3UTR-3UTR CCA 90 bp CCAGTATCTGCTTGCAACCGGCGGCCAGCACCGTGTCCTGTAGCATGCGGTCCGAACGCGTGGTTCTGCTaGGCCTTGGTTTTGGCTACT +
Preference number: 2 (lower is better)
Translates to: PVSACNRRPAPCPVACGPNAWFC*ALVLAT
Trigger: AGTAGCCAAAACCAAGGCCCAGCAGAACCACGCGTT...CGGACCGCATGCTACAGGACACGGTGCTGGCCGCCGGTTGCAAGCAGATACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564750.5
3UTR-3UTR GCA 90 bp GAATACGTGCTGGTCTCGTCGGCGCAGGCCCCGTCCACGTTCAGCGCAATCTGCAGCTCTACCTTCTGCTaGTTGGGCTTGATCTTGGCT +
Preference number: 2 (lower is better)
Translates to: EYVLVSSAQAPSTFSAICSSTFC*LGLILA
Trigger: AGCCAAGATCAAGCCCAAGCAGCAGAAGGTAGAGCT...GCAGATTGCGCTGAACGTGGACGGGGCCTGCGCCGACGAGACCAGCACGTATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561494.5
3UTR-3UTR TCA 90 bp GTGAACTTCCACATAACGAAGTCTCGGCCCCTGCAGAGCACCTCAGCAGGCACGCAGGTACTCACTGGGTaGCTTGACGAGCTCCGTGTT +
Preference number: 2 (lower is better)
Translates to: VNFHITKSRPLQSTSAGTQVLTG*LDELRV
Trigger: AACACGGAGCTCGTCAAGTCACCCAGTGAGTACCTG...CGTGCCTGCTGAGGTGCTCTGCAGGGGCCGAGACTTCGTTATGTGGAAGTTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564750.5
3UTR-3UTR CCA 90 bp TGCGTGAACTTCCACATAACGAAGTCTCGGCCCCTGCAGAGCACCTCAGCAGGCTCTCCTCCTCCTGGCTaGGTGGCATCAGCATCATCA +
Preference number: 2 (lower is better)
Translates to: CVNFHITKSRPLQSTSAGSPPPG*VASASS
Trigger: TGATGATGCTGATGCCACCCAGCCAGGAGGAGGAGA...GCCTGCTGAGGTGCTCTGCAGGGGCCGAGACTTCGTTATGTGGAAGTTCACGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564750.5
3UTR-3UTR TCA 90 bp CTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCTTCTTGCTCTGTGTCGTCTaGAGCAAGTCGAGGCCCTAC +
Preference number: 2 (lower is better)
Translates to: LALCRLKQVEALLLVPPFLLCVV*SKSRPY
Trigger: GTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAA...GAAGGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
3UTR-3UTR TCA 90 bp AGGTACTCACTGGGTGACTTGACGAGCTCCGTGTTCTCCACCCCGCTTGAGCCGCAATGCCACAGGTCATaGGATGGTCAGTTCCTCTTG +
Preference number: 2 (lower is better)
Translates to: RYSLGDLTSSVFSTPLEPQCHRS*DGQFLL
Trigger: CAAGAGGAACTGACCATCTCATGACCTGTGGCATTG...CGGCTCAAGCGGGGTGGAGAACACGGAGCTCGTCAAGTCACCCAGTGAGTACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564750.5
3UTR-3UTR GCA 90 bp TTCACCACCCAGTTCCCTTGGACCAACATCGCCACCTTCTGGATGCCCCGCAGAACCTTGCCTGTAGAGTaGAGCGGCATAACGGGATGT +
Preference number: 2 (lower is better)
Translates to: FTTQFPWTNIATFWMPRRTLPVE*SGITGC
Trigger: ACATCCCGTTATGCCGCTGCACTCTACAGGCAAGGT...TCTGCGGGGCATCCAGAAGGTGGCGATGTTGGTCCAAGGGAACTGGGTGGTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564750.5
3UTR-3UTR CCA 90 bp CGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAATGCCACAGGTCTCGAGGCCCTACTTCTaGTTCCGCCCTTCTTCCTTG +
Preference number: 2 (lower is better)
Translates to: RLAEDNPFCPLHRAMPQVSRPYF*FRPSSL
Trigger: CAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTCGA...GACCTGTGGCATTGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
3UTR-3UTR CCA 90 bp GGAAGAGCAGAAGGTCTGCTTGTCCATCAGCTTCGAGGAATACGTGCTGGTCTCGTAGGTCATCGAGGCTaGACGCACAGGGTACCACGG +
Preference number: 2 (lower is better)
Translates to: GRAEGLLVHQLRGIRAGLVGHRG*THRVPR
Trigger: CCGTGGTACCCTGTGCGTCCAGCCTCGATGACCTAC...GAGACCAGCACGTATTCCTCGAAGCTGATGGACAAGCAGACCTTCTGCTCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561494.5
3UTR-3UTR TCA 90 bp GGTACTGACGCTCATGCTCAGAGCGACTGTCCCTCAGGCCATAGTAATGCAGGTTTGCTCTGTGTCGTCTaGAGCAAGTCGAGGCCCTAC +
Preference number: 2 (lower is better)
Translates to: GTDAHAQSDCPSGHSNAGLLCVV*SKSRPY
Trigger: GTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAA...ACCTGCATTACTATGGCCTGAGGGACAGTCGCTCTGAGCATGAGCGTCAGTACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564750.5
3UTR-3UTR TCA 90 bp CTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCTTCCTAACTAACTTAAGCTaGCCCTGCGACTGGCTGAGG +
Preference number: 2 (lower is better)
Translates to: LALCRLKQVEALLLVPPFLTNLS*PCDWLR
Trigger: CCTCAGCCAGTCGCAGGGTCAGCTTAAGTTAGTTAG...GAAGGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
3UTR-3UTR CCA 90 bp CCGGCAGGCCCTGATTGTGCATCCGGCTTCTTTGGCATGGTTTCCTTTACAAGAAACATCGCCACCTTCTaGATGCCCCGCAGAACAGCC +
Preference number: 2 (lower is better)
Translates to: PAGPDCASGFFGMVSFTRNIATF*MPRRTA
Trigger: GGCTGTTCTGCGGGGCATCCAGAAGGTGGCGATGTT...TCTTGTAAAGGAAACCATGCCAAAGAAGCCGGATGCACAATCAGGGCCTGCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564750.5
3UTR-3UTR TCA 90 bp CCATTAGCTCCGTTCCCTCTAGATACACGTAACGCTGAGCCCAACAAGATCGCCTTGCTCTGTGTCGTCTaGAGCAAGTCGAGGCCCTAC +
Preference number: 2 (lower is better)
Translates to: PLAPFPLDTRNAEPNKIALLCVV*SKSRPY
Trigger: GTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAA...GGCGATCTTGTTGGGCTCAGCGTTACGTGTATCTAGAGGGAACGGAGCTAATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
3UTR-3UTR CCA 90 bp CACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGTCGTTCGAGGCCCTACTTCTaGTTCCGCCCTTCTTCCTTG +
Preference number: 2 (lower is better)
Translates to: HRAMPQVMRWSVPLALCRSRPYF*FRPSSL
Trigger: CAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTCGA...ACGACACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
3UTR-3UTR CCA 90 bp ACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGTCGAGGCCCTACTTCTaGTTCCGCCCTTCTTCCTTG +
Preference number: 2 (lower is better)
Translates to: TAPCNATGHEMVSSSCSVSRPYF*FRPSSL
Trigger: CAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTCGA...CACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
3UTR-3UTR TCA 90 bp GCTCCGTTCCCTCTAGATACACGTAACGCTGAGCCCAACAAGATCGCCTTCCTGGGTTGTTGTCAAAGGTaGAGTGGCCACAGAATCCCA +
Preference number: 2 (lower is better)
Translates to: APFPLDTRNAEPNKIAFLGCCQR*SGHRIP
Trigger: TGGGATTCTGTGGCCACTTCACCTTTGACAACAACC...CAGGAAGGCGATCTTGTTGGGCTCAGCGTTACGTGTATCTAGAGGGAACGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
3UTR-3UTR GCA 90 bp AAGCTGACCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAATGGTCAGTTCCTCTTaGTCTGTGTCGTCTGAAGCA +
Preference number: 2 (lower is better)
Translates to: KLTLRLAEDNPFCPLHRAMVSSS*SVSSEA
Trigger: TGCTTCAGACGACACAGAGCAAGAGGAACTGACCAT...TGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGGTCAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
3UTR-3UTR GCA 90 bp GGAAGAGCAGAAGGTCTGCTTGTCCATCAGCTTCGAGGAATACGTGCTGGTCTCTCTGCTCCCCTTTGCTaGGGCAATAGTTGGGGTTCA +
Preference number: 2 (lower is better)
Translates to: GRAEGLLVHQLRGIRAGLSAPLC*GNSWGS
Trigger: TGAACCCCAACTATTGCCGCAGCAAAGGGGAGCAGA...GAGACCAGCACGTATTCCTCGAAGCTGATGGACAAGCAGACCTTCTGCTCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561494.5
3UTR-3UTR CCA 90 bp CTTAAGCTGACCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTCCACAGGTCATGAGATaGTCAGTTCCTCTTGCTCTG +
Preference number: 2 (lower is better)
Translates to: LKLTLRLAEDNPFCPLHRPQVMR*SVPLAL
Trigger: CAGAGCAAGAGGAACTGACCATCTCATGACCTGTGG...ACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGGTCAGCTTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
3UTR-3UTR GCA 90 bp CTTAAGCTGACCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTATGGTCAGTTCCTCTTaGTCTGTGTCGTCTGAAGCA +
Preference number: 2 (lower is better)
Translates to: LKLTLRLAEDNPFCPLHRMVSSS*SVSSEA
Trigger: TGCTTCAGACGACACAGAGCAAGAGGAACTGACCAT...ACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGGTCAGCTTAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
3UTR-3UTR GCA 90 bp GTAACGCTGAGCCCAACAAGATCGCCTTCCTGTAACCATTTGAAGATAGCACCAATCCCTTCTGTCCACTaGACCGTGCAATGCCACAGG +
Preference number: 2 (lower is better)
Translates to: VTLSPTRSPSCNHLKIAPIPSVH*TVQCHR
Trigger: CCTGTGGCATTGCACGGTGCAGTGGACAGAAGGGAT...TGGTGCTATCTTCAAATGGTTACAGGAAGGCGATCTTGTTGGGCTCAGCGTTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
3UTR-3UTR CCA 90 bp GTAACGCTGAGCCCAACAAGATCGCCTTCCTGTAACCATTTGAAGATAGCACCATCGAGGCCCTACTTCTaGTTCCGCCCTTCTTCCTTG +
Preference number: 2 (lower is better)
Translates to: VTLSPTRSPSCNHLKIAPSRPYF*FRPSSL
Trigger: CAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTCGA...TGGTGCTATCTTCAAATGGTTACAGGAAGGCGATCTTGTTGGGCTCAGCGTTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
3UTR-3UTR CCA 90 bp CTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCTTCTTGTCAAAGGTGAAGTaGCCACAGAATCCCAAGAAT +
Preference number: 2 (lower is better)
Translates to: LALCRLKQVEALLLVPPFLSKVK*PQNPKN
Trigger: ATTCTTGGGATTCTGTGGCCACTTCACCTTTGACAA...GAAGGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
3UTR-3UTR CCA 90 bp CCGGCAGGCCCTGATTGTGCATCCGGCTTCTTTGGCATGGTTTCCTTTACAAGAAGACTTTTTCCAGTTTaGCCTGGATACCCGTCCACA +
Preference number: 2 (lower is better)
Translates to: PAGPDCASGFFGMVSFTRRLFPV*PGYPST
Trigger: TGTGGACGGGTATCCAGGCCAAACTGGAAAAAGTCT...TCTTGTAAAGGAAACCATGCCAAAGAAGCCGGATGCACAATCAGGGCCTGCCGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564750.5
3UTR-3UTR GCA 90 bp CAAATTGTACTGCAAAGAAGGTCCCAGCTGGTCTCTTCTGGGAGTGATCTAACTCTGTCCACTGCACCGTaGAATGCCACAGGTCATGAG +
Preference number: 2 (lower is better)
Translates to: QIVLQRRSQLVSSGSDLTLSTAP*NATGHE
Trigger: CTCATGACCTGTGGCATTGCACGGTGCAGTGGACAG...AGTTAGATCACTCCCAGAAGAGACCAGCTGGGACCTTCTTTGCAGTACAATTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
3UTR-3UTR CCA 90 bp CGGGTGCTTCTTGATGAACTCCCCATCATAAGGCAGAATGAACTCCCAGCCTTTCCACAGGTCATGAGATaGTCAGTTCCTCTTGCTCTG +
Preference number: 2 (lower is better)
Translates to: RVLLDELPIIRQNELPAFPQVMR*SVPLAL
Trigger: CAGAGCAAGAGGAACTGACCATCTCATGACCTGTGG...AAAGGCTGGGAGTTCATTCTGCCTTATGATGGGGAGTTCATCAAGAAGCACCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564750.5
3UTR-3UTR TCA 90 bp GTAACGCTGAGCCCAACAAGATCGCCTTCCTGTAACCATTTGAAGATAGCACCAGGTTGTTGTCAAAGGTaGAGTGGCCACAGAATCCCA +
Preference number: 2 (lower is better)
Translates to: VTLSPTRSPSCNHLKIAPGCCQR*SGHRIP
Trigger: TGGGATTCTGTGGCCACTTCACCTTTGACAACAACC...TGGTGCTATCTTCAAATGGTTACAGGAAGGCGATCTTGTTGGGCTCAGCGTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
3UTR-3UTR GCA 90 bp TTTCAAATTGTACTGCAAAGAAGGTCCCAGCTGGTCTCTTCTGGGAGTGATCTAATCCCTTCTGTCCACTaGACCGTGCAATGCCACAGG +
Preference number: 2 (lower is better)
Translates to: FQIVLQRRSQLVSSGSDLIPSVH*TVQCHR
Trigger: CCTGTGGCATTGCACGGTGCAGTGGACAGAAGGGAT...TAGATCACTCCCAGAAGAGACCAGCTGGGACCTTCTTTGCAGTACAATTTGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
3UTR-3UTR TCA 90 bp AGAAACTTTCAAAATTATGTACGTGACTCGCCTCTTTCTAGTGGACAGTGCTGCTTGCTCTGTGTCGTCTaGAGCAAGTCGAGGCCCTAC +
Preference number: 2 (lower is better)
Translates to: RNFQNYVRDSPLSSGQCCLLCVV*SKSRPY
Trigger: GTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAA...GCAGCACTGTCCACTAGAAAGAGGCGAGTCACGTACATAATTTTGAAAGTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
3UTR-3UTR TCA 90 bp CAAAATTATGTACGTGACTCGCCTCTTTCTAGTGGACAGTGCTGCTCTGTCTTCGGTTGTTGTCAAAGGTaGAGTGGCCACAGAATCCCA +
Preference number: 2 (lower is better)
Translates to: QNYVRDSPLSSGQCCSVFGCCQR*SGHRIP
Trigger: TGGGATTCTGTGGCCACTTCACCTTTGACAACAACC...GAAGACAGAGCAGCACTGTCCACTAGAAAGAGGCGAGTCACGTACATAATTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
3UTR-3UTR GCA 90 bp GTAACGCTGAGCCCAACAAGATCGCCTTCCTGTAACCATTTGAAGATAGCACCAATGGTCAGTTCCTCTTaGTCTGTGTCGTCTGAAGCA +
Preference number: 2 (lower is better)
Translates to: VTLSPTRSPSCNHLKIAPMVSSS*SVSSEA
Trigger: TGCTTCAGACGACACAGAGCAAGAGGAACTGACCAT...TGGTGCTATCTTCAAATGGTTACAGGAAGGCGATCTTGTTGGGCTCAGCGTTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
3UTR-3UTR CCA 90 bp CAAAATTATGTACGTGACTCGCCTCTTTCTAGTGGACAGTGCTGCTCTGTCTTCCCACAGGTCATGAGATaGTCAGTTCCTCTTGCTCTG +
Preference number: 2 (lower is better)
Translates to: QNYVRDSPLSSGQCCSVFPQVMR*SVPLAL
Trigger: CAGAGCAAGAGGAACTGACCATCTCATGACCTGTGG...GAAGACAGAGCAGCACTGTCCACTAGAAAGAGGCGAGTCACGTACATAATTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
3UTR-3UTR CCA 90 bp CAAAATTATGTACGTGACTCGCCTCTTTCTAGTGGACAGTGCTGCTCTGTCTTCAAAGAAGGTCCCAGCTaGTCTCTTCTGGGAGTGATC +
Preference number: 2 (lower is better)
Translates to: QNYVRDSPLSSGQCCSVFKEGPS*SLLGVI
Trigger: GATCACTCCCAGAAGAGACCAGCTGGGACCTTCTTT...GAAGACAGAGCAGCACTGTCCACTAGAAAGAGGCGAGTCACGTACATAATTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
3UTR-3UTR GCA 90 bp GAGTGGGGAAATAGCATAGACCGTCATTTAAACCTTCAGACAATTAGTGACTGTATCCCTTCTGTCCACTaGACCGTGCAATGCCACAGG +
Preference number: 2 (lower is better)
Translates to: EWGNSIDRHLNLQTISDCIPSVH*TVQCHR
Trigger: CCTGTGGCATTGCACGGTGCAGTGGACAGAAGGGAT...ACAGTCACTAATTGTCTGAAGGTTTAAATGACGGTCTATGCTATTTCCCCACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
3UTR-3UTR TCA 90 bp AGAAACTTTCAAAATTATGTACGTGACTCGCCTCTTTCTAGTGGACAGTGCTGCGGTTGTTGTCAAAGGTaGAGTGGCCACAGAATCCCA +
Preference number: 2 (lower is better)
Translates to: RNFQNYVRDSPLSSGQCCGCCQR*SGHRIP
Trigger: TGGGATTCTGTGGCCACTTCACCTTTGACAACAACC...GCAGCACTGTCCACTAGAAAGAGGCGAGTCACGTACATAATTTTGAAAGTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
3UTR-3UTR CCA 90 bp GTAACGCTGAGCCCAACAAGATCGCCTTCCTGTAACCATTTGAAGATAGCACCATTGTCAAAGGTGAAGTaGCCACAGAATCCCAAGAAT +
Preference number: 2 (lower is better)
Translates to: VTLSPTRSPSCNHLKIAPLSKVK*PQNPKN
Trigger: ATTCTTGGGATTCTGTGGCCACTTCACCTTTGACAA...TGGTGCTATCTTCAAATGGTTACAGGAAGGCGATCTTGTTGGGCTCAGCGTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
3UTR-3UTR GCA 90 bp GAGTGGGGAAATAGCATAGACCGTCATTTAAACCTTCAGACAATTAGTGACTGTATGGTCAGTTCCTCTTaGTCTGTGTCGTCTGAAGCA +
Preference number: 2 (lower is better)
Translates to: EWGNSIDRHLNLQTISDCMVSSS*SVSSEA
Trigger: TGCTTCAGACGACACAGAGCAAGAGGAACTGACCAT...ACAGTCACTAATTGTCTGAAGGTTTAAATGACGGTCTATGCTATTTCCCCACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
3UTR-3UTR CCA 90 bp AACCATGATTTTTATCATCCTGCCCATGTCAGTATACACTCTCTTTATTATGAGTCGAGGCCCTACTTCTaGTTCCGCCCTTCTTCCTTG +
Preference number: 2 (lower is better)
Translates to: NHDFYHPAHVSIHSLYYESRPYF*FRPSSL
Trigger: CAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTCGA...CTCATAATAAAGAGAGTGTATACTGACATGGGCAGGATGATAAAAATCATGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000299853.10
ENST00000418581.6
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
3UTR GCA 72 bp CGAGCCACAGGGGTGCTGGCGCAGCCCTGGGGCGGGTaGCCGTTGAAGCTGTCTGTGCCCGCAGCCCGCCCG +
Preference number: 3 (lower is better)
Translates to: RATGVLAQPWGG*PLKLSVPAARP
Trigger: CGGGCGGGCTGCGGGCACAGACAGCTTCAACGGGCACCCGCCCCAGGGCTGCGCCAGCACCCCTGTGGCTCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564750.5
3UTR GCA 72 bp CCGCAGCCCGCCCGAGAGGCAGCCCGTTGGCCAGCTTaGTGTGGAGGCCGCTGGGGGAAGTGTCCATGGGCT +
Preference number: 3 (lower is better)
Translates to: PQPAREAARWPA*CGGRWGKCPWA
Trigger: AGCCCATGGACACTTCCCCCAGCGGCCTCCACAGCAAGCTGGCCAACGGGCTGCCTCTCGGGCGGGCTGCGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564750.5
3UTR CCA 72 bp GCCCGCCCGAGAGGCAGCCCGTTGGCCAGCTTGCTGTaGAGGCCGCTGGGGGAAGTGTCCATGGGCTCCTCC +
Preference number: 3 (lower is better)
Translates to: ARPRGSPLASLL*RPLGEVSMGSS
Trigger: GGAGGAGCCCATGGACACTTCCCCCAGCGGCCTCCACAGCAAGCTGGCCAACGGGCTGCCTCTCGGGCGGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564750.5
3UTR GCA 72 bp CTGGGGGAAGTGTCCATGGGCTCCTCCTCCGCCTCCTaGTCCTCGTCCTCCTCGCCCTCCTCGCTCACGGGC +
Preference number: 3 (lower is better)
Translates to: LGEVSMGSSSAS*SSSSSPSSLTG
Trigger: GCCCGTGAGCGAGGAGGGCGAGGAGGACGAGGAGCAGGAGGCGGAGGAGGAGCCCATGGACACTTCCCCCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564750.5
3UTR CCA 72 bp TTCAGTTCCCGAGCCACAGGGGTGCTGGCGCAGCCCTaGGGCGGGTGCCCGTTGAAGCTGTCTGTGCCCGCA +
Preference number: 3 (lower is better)
Translates to: FSSRATGVLAQP*GGCPLKLSVPA
Trigger: TGCGGGCACAGACAGCTTCAACGGGCACCCGCCCCAGGGCTGCGCCAGCACCCCTGTGGCTCGGGAACTGAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564750.5
3UTR CCA 72 bp CCCCTGCCTCGTTGGCCGCCTCCCTCTCCCGGTGCTTaGCGTCAGCCTTATCCAGGTAGGAGAAGCTGGGCC +
Preference number: 3 (lower is better)
Translates to: PLPRWPPPSPGA*RQPYPGRRSWA
Trigger: GGCCCAGCTTCTCCTACCTGGATAAGGCTGACGCCAAGCACCGGGAGAGGGAGGCGGCCAACGAGGCAGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564750.5
3UTR CCA 72 bp CCAGCTTGCTGTGGAGGCCGCTGGGGGAAGTGTCCATaGGCTCCTCCTCCGCCTCCTGCTCCTCGTCCTCCT +
Preference number: 3 (lower is better)
Translates to: PACCGGRWGKCP*APPPPPAPRPP
Trigger: AGGAGGACGAGGAGCAGGAGGCGGAGGAGGAGCCCATGGACACTTCCCCCAGCGGCCTCCACAGCAAGCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564750.5
3UTR TCA 72 bp CTCATAGGACTGCACACGGCGCTGGCGGGCCTGCTCTaGCTCCGGCCGGGAGAACCGCACCGTGATCTGCTT +
Preference number: 3 (lower is better)
Translates to: LIGLHTALAGLL*LRPGEPHRDLL
Trigger: AAGCAGATCACGGTGCGGTTCTCCCGGCCGGAGTCAGAGCAGGCCCGCCAGCGCCGTGTGCAGTCCTATGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564750.5
ENST00000565551.5
3UTR-3UTR CAA 90 bp CCGTTGGCCAGCTTGCTGTGGAGGCCGCTGGGGGAAGTGTCCATGGGCTCCTCCTCCTCGGCGCAGAGTTaGGTCACGGTTGCCACCTCT +
Preference number: 3 (lower is better)
Translates to: PLASLLWRPLGEVSMGSSSSAQS*VTVATS
Trigger: AGAGGTGGCAACCGTGACCAAACTCTGCGCCGAGGA...GGAGGAGCCCATGGACACTTCCCCCAGCGGCCTCCACAGCAAGCTGGCCAACGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564750.5
3UTR TCA 72 bp TTCTCCACCCCGCTTGAGCCGGGGCACAGCAGGTACTaGCGCTCATGCTCAGAGCGACTGTCCCTCAGGCCA +
Preference number: 3 (lower is better)
Translates to: FSTPLEPGHSRY*RSCSERLSLRP
Trigger: TGGCCTGAGGGACAGTCGCTCTGAGCATGAGCGTCAGTACCTGCTGTGCCCCGGCTCAAGCGGGGTGGAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564750.5
ENST00000565551.5
3UTR-3UTR CAA 90 bp ACTGTCTCTGAAAGGTGGCCTCCACGAAGGCCTTCAGTTCCCGAGCCACAGGGGCTGGGGGCCACAGGCTaGTCTTTCTCCTCCTCCTGG +
Preference number: 3 (lower is better)
Translates to: TVSERWPPRRPSVPEPQGLGATG*SFSSSW
Trigger: CCAGGAGGAGGAGAAAGACAAGCCTGTGGCCCCCAG...CCCCTGTGGCTCGGGAACTGAAGGCCTTCGTGGAGGCCACCTTTCAGAGACAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564750.5
3UTR GCA 72 bp CCCAGTTCCCTTGGACCAACATCGCCACCTTCTGGATaGCCCGCAGAACAGCCACGGAATCGATGGAGGGGC +
Preference number: 3 (lower is better)
Translates to: PSSLGPTSPPSG*PAEQPRNRWRG
Trigger: GCCCCTCCATCGATTCCGTGGCTGTTCTGCGGGGCATCCAGAAGGTGGCGATGTTGGTCCAAGGGAACTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564750.5
3UTR CCA 72 bp AGGTCTGCTTGTCCATCAGCTTCGAGGAATACGTGCTaGTCTCGTCGGCGCAGGCCCCGTCCACGTTCAGCG +
Preference number: 3 (lower is better)
Translates to: RSACPSASRNTC*SRRRRPRPRSA
Trigger: CGCTGAACGTGGACGGGGCCTGCGCCGACGAGACCAGCACGTATTCCTCGAAGCTGATGGACAAGCAGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561494.5
3UTR CCA 72 bp CAGCAGGCACGCCGCTGTGAGGGCTGGACGAGTCCTTaGGGTATAGGATGTCACTCTTCACCACCCAGTTCC +
Preference number: 3 (lower is better)
Translates to: QQARRCEGWTSP*GIGCHSSPPSS
Trigger: GGAACTGGGTGGTGAAGAGTGACATCCTATACCCCAAGGACTCGTCCAGCCCTCACAGCGGCGTGCCTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564750.5
3UTR-3UTR CAA 90 bp ATCAGCTTCGAGGAATACGTGCTGGTCTCGTCGGCGCAGGCCCCGTCCACGTTCTTCTGCTGCTTGGGCTaGATCTTGGCTGAGAGGTGC +
Preference number: 3 (lower is better)
Translates to: ISFEEYVLVSSAQAPSTFFCCLG*ILAERC
Trigger: GCACCTCTCAGCCAAGATCAAGCCCAAGCAGCAGAA...GAACGTGGACGGGGCCTGCGCCGACGAGACCAGCACGTATTCCTCGAAGCTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561494.5
3UTR TCA 72 bp CGTGATCTGCTTAACATCGTCTTCCGCCTCATCCTGTaGAGAGTCCCCTGCCTCGTTGGCCGCCTCCCTCTC +
Preference number: 3 (lower is better)
Translates to: RDLLNIVFRLIL*RVPCLVGRLPL
Trigger: GAGAGGGAGGCGGCCAACGAGGCAGGGGACTCTTCACAGGATGAGGCGGAAGACGATGTTAAGCAGATCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564750.5
ENST00000565551.5
3UTR GCA 72 bp GTCCTTCACATCCTCGGCGCAGAGTTTGGTCACGGTTaGCACCTCTTTCCTAACCACCCAGCGGCTCTGCGT +
Preference number: 3 (lower is better)
Translates to: VLHILGAEFGHG*HLFPNHPAALR
Trigger: ACGCAGAGCCGCTGGGTGGTTAGGAAAGAGGTGGCAACCGTGACCAAACTCTGCGCCGAGGATGTGAAGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564750.5
3UTR CCA 72 bp ACCACCCAGTTCCCTTGGACCAACATCGCCACCTTCTaGATGCCCCGCAGAACAGCCACGGAATCGATGGAG +
Preference number: 3 (lower is better)
Translates to: TTQFPWTNIATF*MPRRTATESME
Trigger: CTCCATCGATTCCGTGGCTGTTCTGCGGGGCATCCAGAAGGTGGCGATGTTGGTCCAAGGGAACTGGGTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564750.5
3UTR CCA 72 bp TGCAGAGCACCTCAGCAGGCACGCCGCTGTGAGGGCTaGACGAGTCCTTGGGGTATAGGATGTCACTCTTCA +
Preference number: 3 (lower is better)
Translates to: CRAPQQARRCEG*TSPWGIGCHSS
Trigger: TGAAGAGTGACATCCTATACCCCAAGGACTCGTCCAGCCCTCACAGCGGCGTGCCTGCTGAGGTGCTCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564750.5
3UTR CCA 72 bp TTGGCCTGGATACCCGTCCACAGCATGTGCTGCCGCTaGACCACATCCGGGTGCTTCTTGATGAACTCCCCA +
Preference number: 3 (lower is better)
Translates to: LAWIPVHSMCCR*TTSGCFLMNSP
Trigger: TGGGGAGTTCATCAAGAAGCACCCGGATGTGGTCCAGCGGCAGCACATGCTGTGGACGGGTATCCAGGCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564750.5
3UTR-3UTR CAA 90 bp GCGACTGTCCCTCAGGCCATAGTAATGCAGGTGGACCCAGGGCTCCTCTGCGTGTTCCGCCCTTCTTCCTaGGGCTTAGATTTGCTGGGT +
Preference number: 3 (lower is better)
Translates to: ATVPQAIVMQVDPGLLCVFRPSS*GLDLLG
Trigger: ACCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAA...CACGCAGAGGAGCCCTGGGTCCACCTGCATTACTATGGCCTGAGGGACAGTCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564750.5
3UTR-3UTR CAA 90 bp CAGGTACTGACGCTCATGCTCAGAGCGACTGTCCCTCAGGCCATAGTAATGCAGCAGGTGGAGCTCACCTaGCCTGTAGAGTGCAGCGGC +
Preference number: 3 (lower is better)
Translates to: QVLTLMLRATVPQAIVMQQVELT*PVECSG
Trigger: GCCGCTGCACTCTACAGGCAAGGTGAGCTCCACCTG...CTGCATTACTATGGCCTGAGGGACAGTCGCTCTGAGCATGAGCGTCAGTACCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564750.5
3UTR-3UTR CAA 90 bp TCTGCTTGTCCATCAGCTTCGAGGAATACGTGCTGGTCTCGTCGGCGCAGGCCCTCTACCTTCTGCTGCTaGGGCTTGATCTTGGCTGAG +
Preference number: 3 (lower is better)
Translates to: SACPSASRNTCWSRRRRPSTFCC*GLILAE
Trigger: CTCAGCCAAGATCAAGCCCAAGCAGCAGAAGGTAGA...GGGCCTGCGCCGACGAGACCAGCACGTATTCCTCGAAGCTGATGGACAAGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561494.5
3UTR-3UTR CAA 90 bp GGGCAGGCTGGCCAAGTGCAGATTGAAGAGGCGCTTGAGTTCGCTCAGCGTGAGTGGTTCTGCTGGGCCTaGGTTTTGGCTACTTGGATC +
Preference number: 3 (lower is better)
Translates to: GQAGQVQIEEALEFAQREWFCWA*VLATWI
Trigger: GATCCAAGTAGCCAAAACCAAGGCCCAGCAGAACCA...CTCACGCTGAGCGAACTCAAGCGCCTCTTCAATCTGCACTTGGCCAGCCTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564750.5
3UTR GCA 72 bp TATCCAGGTAGGAGAAGCTGGGCCGCAGCTGCAGGATaGCATGTAAAGGTGTCAGGTGGAGCTCACCTTGCC +
Preference number: 3 (lower is better)
Translates to: YPGRRSWAAAAG*HVKVSGGAHLA
Trigger: GGCAAGGTGAGCTCCACCTGACACCTTTACATGGCATCCTGCAGCTGCGGCCCAGCTTCTCCTACCTGGATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564750.5
3UTR GCA 72 bp ACGGTTGCCACCTCTTTCCTAACCACCCAGCGGCTCTaGGTGAACTTCCACATAACGAAGTCTCGGCCCCTG +
Preference number: 3 (lower is better)
Translates to: TVATSFLTTQRL*VNFHITKSRPL
Trigger: CAGGGGCCGAGACTTCGTTATGTGGAAGTTCACGCAGAGCCGCTGGGTGGTTAGGAAAGAGGTGGCAACCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564750.5
3UTR GCA 72 bp TCCAGTTTGGCCTGGATACCCGTCCACAGCATGTGCTaGCGCTGGACCACATCCGGGTGCTTCTTGATGAAC +
Preference number: 3 (lower is better)
Translates to: SSLAWIPVHSMC*RWTTSGCFLMN
Trigger: GTTCATCAAGAAGCACCCGGATGTGGTCCAGCGGCAGCACATGCTGTGGACGGGTATCCAGGCCAAACTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564750.5
3UTR CCA 72 bp GGTGCTTGGCGTCAGCCTTATCCAGGTAGGAGAAGCTaGGCCGCAGCTGCAGGATGCCATGTAAAGGTGTCA +
Preference number: 3 (lower is better)
Translates to: GAWRQPYPGRRS*AAAAGCHVKVS
Trigger: TGACACCTTTACATGGCATCCTGCAGCTGCGGCCCAGCTTCTCCTACCTGGATAAGGCTGACGCCAAGCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564750.5
3UTR GCA 72 bp AACTCCCAGCCTTTGTTGATCCTCACCACGGCCATGTaGTCCAGGAAGTCCTTCACATCCTCGGCGCAGAGT +
Preference number: 3 (lower is better)
Translates to: NSQPLLILTTAM*SRKSFTSSAQS
Trigger: ACTCTGCGCCGAGGATGTGAAGGACTTCCTGGAGCACATGGCCGTGGTGAGGATCAACAAAGGCTGGGAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564750.5
3UTR GCA 72 bp TTTTCCAGTTTGGCCTGGATACCCGTCCACAGCATGTaGTGCCGCTGGACCACATCCGGGTGCTTCTTGATG +
Preference number: 3 (lower is better)
Translates to: FSSLAWIPVHSM*CRWTTSGCFLM
Trigger: CATCAAGAAGCACCCGGATGTGGTCCAGCGGCAGCACATGCTGTGGACGGGTATCCAGGCCAAACTGGAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564750.5
3UTR-3UTR CAA 90 bp AAGCTGACCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCATTCCGCCCTTCTTCCTaGGGCTTAGATTTGCTGGGT +
Preference number: 3 (lower is better)
Translates to: KLTLRLAEDNPFCPLHRAFRPSS*GLDLLG
Trigger: ACCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAA...TGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGGTCAGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
3UTR-3UTR CAA 90 bp CGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAATGCCACAGGTCTTCCGCCCTTCTTCCTaGGGCTTAGATTTGCTGGGT +
Preference number: 3 (lower is better)
Translates to: RLAEDNPFCPLHRAMPQVFRPSS*GLDLLG
Trigger: ACCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAA...GACCTGTGGCATTGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
3UTR-3UTR CAA 90 bp GCTGCGGCAATAGTTGGGGTTCAGGGTGTCGATGGCCATCTCAAGCTCTACCTTTGCTTGGGCTTGATCTaGGCTGAGAGGTGCGGAATG +
Preference number: 3 (lower is better)
Translates to: AAAIVGVQGVDGHLKLYLCLGLI*AERCGM
Trigger: CATTCCGCACCTCTCAGCCAAGATCAAGCCCAAGCA...AAGGTAGAGCTTGAGATGGCCATCGACACCCTGAACCCCAACTATTGCCGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561494.5
3UTR CCA 72 bp TCAGCGCAATCTGCTCCCCTTTGCTGCGGCAATAGTTaGGGTTCAGGGTGTCGATGGCCATCTCAAGCTCTA +
Preference number: 3 (lower is better)
Translates to: SAQSAPLCCGNS*GSGCRWPSQAL
Trigger: TAGAGCTTGAGATGGCCATCGACACCCTGAACCCCAACTATTGCCGCAGCAAAGGGGAGCAGATTGCGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561494.5
3UTR-3UTR CAA 90 bp CCACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTTCCGCCCTTCTTCCTaGGGCTTAGATTTGCTGGGT +
Preference number: 3 (lower is better)
Translates to: PLHRAMPQVMRWSVPLALFRPSS*GLDLLG
Trigger: ACCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAA...CAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
3UTR TCA 72 bp TGGCCATCTCAAGCTCTACCTTCTGCTGCTTGGGCTTaGTCTTGGCTGAGAGGTGCGGAATGTCATCGTAGG +
Preference number: 3 (lower is better)
Translates to: WPSQALPSAAWA*SWLRGAECHRR
Trigger: CCTACGATGACATTCCGCACCTCTCAGCCAAGATCAAGCCCAAGCAGCAGAAGGTAGAGCTTGAGATGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561494.5
3UTR GCA 72 bp TGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTaGTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACT +
Preference number: 3 (lower is better)
Translates to: CNATGHEMVSSS*SVSSEASRGPT
Trigger: AGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
3UTR-3UTR CAA 90 bp CTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCTTCAGTAGTTTGCTACTATaGTCAAGACTGTACTGTCCC +
Preference number: 3 (lower is better)
Translates to: LALCRLKQVEALLLVPPFSSLLL*SRLYCP
Trigger: GGGACAGTACAGTCTTGACAATAGTAGCAAACTACT...GAAGGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564750.5
3UTR TCA 72 bp CTGGTCTCTTCTGGGAGTGATCTAACTAACTTAAGCTaGCCCTGCGACTGGCTGAGGATAATCCCTTCTGTC +
Preference number: 3 (lower is better)
Translates to: LVSSGSDLTNLS*PCDWLRIIPSV
Trigger: GACAGAAGGGATTATCCTCAGCCAGTCGCAGGGTCAGCTTAAGTTAGTTAGATCACTCCCAGAAGAGACCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
3UTR TCA 72 bp TCCACCTCCTGTTTACTGAGATCTTCTCCACACTCTTaGGTCAACCGAGACTGGATCATGTTTCGGCGTACC +
Preference number: 3 (lower is better)
Translates to: STSCLLRSSPHS*VNRDWIMFRRT
Trigger: GGTACGCCGAAACATGATCCAGTCTCGGTTGACTCAAGAGTGTGGAGAAGATCTCAGTAAACAGGAGGTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564750.5
3UTR-3UTR CAA 90 bp GAGTGGGGAAATAGCATAGACCGTCATTTAAACCTTCAGACAATTAGTGACTGTTTCCGCCCTTCTTCCTaGGGCTTAGATTTGCTGGGT +
Preference number: 3 (lower is better)
Translates to: EWGNSIDRHLNLQTISDCFRPSS*GLDLLG
Trigger: ACCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAA...ACAGTCACTAATTGTCTGAAGGTTTAAATGACGGTCTATGCTATTTCCCCACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
3UTR-3UTR CAA 90 bp GTAACGCTGAGCCCAACAAGATCGCCTTCCTGTAACCATTTGAAGATAGCACCAATCAGGAATTTCAAATaGTACTGCAAAGAAGGTCCC +
Preference number: 3 (lower is better)
Translates to: VTLSPTRSPSCNHLKIAPIRNFK*YCKEGP
Trigger: GGGACCTTCTTTGCAGTACAATTTGAAATTCCTGAT...TGGTGCTATCTTCAAATGGTTACAGGAAGGCGATCTTGTTGGGCTCAGCGTTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
3UTR-3UTR CAA 90 bp TTTAAACTAATGTGGTTGCTAGAAACTTTCAAAATTATGTACGTGACTCGCCTCTTTGGTTTAATGAAATaGGTGGAGGTCTTAGCAGAT +
Preference number: 3 (lower is better)
Translates to: FKLMWLLETFKIMYVTRLFGLMK*VEVLAD
Trigger: ATCTGCTAAGACCTCCACCAATTTCATTAAACCAAA...GAGGCGAGTCACGTACATAATTTTGAAAGTTTCTAGCAACCACATTAGTTTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CCGCAGCCCGCCCGAGAGGCAGCCCGTTGGCCAGCTTGCTGTGGAGGCCGCTGGGCCCGTTGGCCAGCTTaGTGTGGAGGCCGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: PQPAREAARWPACCGGRWARWPA*CGGRWG
Trigger: CCCCCAGCGGCCTCCACAGCAAGCTGGCCAACGGGC...CCAGCGGCCTCCACAGCAAGCTGGCCAACGGGCTGCCTCTCGGGCGGGCTGCGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564750.5
CDS-3UTR TCA 90 bp GTGCGCAGCTGGGCCATCGACAGGACGTTGCTGGGGGCCACAGGCTTGTCTTTCCTGGCGGGCCTGCTCTaGCTCCGGCCGGGAGAACCG +
Preference number: 4 (lower is better)
Translates to: VRSWAIDRTLLGATGLSFLAGLL*LRPGEP
Trigger: CGGTTCTCCCGGCCGGAGTCAGAGCAGGCCCGCCAG...GAAAGACAAGCCTGTGGCCCCCAGCAACGTCCTGTCGATGGCCCAGCTGCGCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000564750.5
ENST00000565551.5
CDS-3UTR TCA 90 bp CCGTTGGCCAGCTTGCTGTGGAGGCCGCTGGGGGAAGTGTCCATGGGCTCCTCCGGTCCGAGATGCCGCTaGAGAGTGTGTGGCCGGGGG +
Preference number: 4 (lower is better)
Translates to: PLASLLWRPLGEVSMGSSGPRCR*RVCGRG
Trigger: CCCCCGGCCACACACTCTTCAGCGGCATCTCGGACC...GGAGGAGCCCATGGACACTTCCCCCAGCGGCCTCCACAGCAAGCTGGCCAACGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564750.5
CDS-3UTR TCA 90 bp CCCCGCTTGAGCCGGGGCACAGCAGGTACTGACGCTCATGCTCAGAGCGACTGTTCACGGGCTCCTCCTTaGTCCGCACACCGGGCGGGA +
Preference number: 4 (lower is better)
Translates to: PRLSRGTAGTDAHAQSDCSRAPP*SAHRAG
Trigger: TCCCGCCCGGTGTGCGGATCAAGGAGGAGCCCGTGA...ACAGTCGCTCTGAGCATGAGCGTCAGTACCTGCTGTGCCCCGGCTCAAGCGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564750.5
CDS-3UTR CCA 90 bp TCGTCTTCCGCCTCATCCTGTGAAGAGTCCCCTGCCTCGTTGGCCGCCTCCCTCAGTCCCCTGCCTCGTTaGCCGCCTCCCTCTCCCGGT +
Preference number: 4 (lower is better)
Translates to: SSSASSCEESPASLAASLSPLPR*PPPSPG
Trigger: ACCGGGAGAGGGAGGCGGCCAACGAGGCAGGGGACT...GAGGGAGGCGGCCAACGAGGCAGGGGACTCTTCACAGGATGAGGCGGAAGACGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564750.5
ENST00000565551.5
CDS-3UTR TCA 90 bp AGAGCGACTGTCCCTCAGGCCATAGTAATGCAGGTGGACCCAGGGCTCCTCTGCGGGGCGGGTGCCCGTTaGAGCTGTCTGTGCCCGCAG +
Preference number: 4 (lower is better)
Translates to: RATVPQAIVMQVDPGLLCGAGAR*SCLCPQ
Trigger: CTGCGGGCACAGACAGCTTCAACGGGCACCCGCCCC...GCAGAGGAGCCCTGGGTCCACCTGCATTACTATGGCCTGAGGGACAGTCGCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564750.5
CDS-3UTR GCA 90 bp CGCAATCTGCTCCCCTTTGCTGCGGCAATAGTTGGGGTTCAGGGTGTCGATGGCCAGTTACCCGCGGGCTaGAGAGACGGCGGCGGCCCG +
Preference number: 4 (lower is better)
Translates to: RNLLPFAAAIVGVQGVDGQLPAG*RDGGGP
Trigger: CGGGCCGCCGCCGTCTCTGCAGCCCGCGGGTAACTG...GCCATCGACACCCTGAACCCCAACTATTGCCGCAGCAAAGGGGAGCAGATTGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561494.5
CDS-3UTR GCA 90 bp GCAGCGTGCGCAGCTGGGCCATCGACAGGACGTTGCTGGGGGCCACAGGCTTGTGCTTCGAGGAATACGTaGTGGTCTCGTCGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: AACAAGPSTGRCWGPQACASRNT*WSRRRR
Trigger: CCTGCGCCGACGAGACCAGCACGTATTCCTCGAAGC...ACAAGCCTGTGGCCCCCAGCAACGTCCTGTCGATGGCCCAGCTGCGCACGCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000564750.5
ENST00000565551.5
CDS-3UTR GCA 90 bp CCGCAGCCCGCCCGAGAGGCAGCCCGTTGGCCAGCTTGCTGTGGAGGCCGCTGGGAGTTTGGTCACGGTTaGCACCTCTTTCCTAACCAC +
Preference number: 4 (lower is better)
Translates to: PQPAREAARWPACCGGRWEFGHG*HLFPNH
Trigger: GTGGTTAGGAAAGAGGTGGCAACCGTGACCAAACTC...CCAGCGGCCTCCACAGCAAGCTGGCCAACGGGCTGCCTCTCGGGCGGGCTGCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564750.5
CDS-3UTR TCA 90 bp GTCGGCGCAGGCCCCGTCCACGTTCAGCGCAATCTGCTCCCCTTTGCTGCGGCATCTGCTGCTTGGGCTTaGTCTTGGCTGAGAGGTGCG +
Preference number: 4 (lower is better)
Translates to: VGAGPVHVQRNLLPFAAASAAWA*SWLRGA
Trigger: CGCACCTCTCAGCCAAGATCAAGCCCAAGCAGCAGA...TGCCGCAGCAAAGGGGAGCAGATTGCGCTGAACGTGGACGGGGCCTGCGCCGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561494.5
CDS-3UTR TCA 90 bp CGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTCTGGCGGGCCTGCTCTaGCTCCGGCCGGGAGAACCG +
Preference number: 4 (lower is better)
Translates to: RLKQVEALLLVPPFFLGLLAGLL*LRPGEP
Trigger: CGGTTCTCCCGGCCGGAGTCAGAGCAGGCCCGCCAG...AAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp TCCTCCTCCTGGCTGGGTGGCATCAGCATCATCAGGTACTCACTGGGTGACTTGCTGGCGGGCCTGCTCTaGCTCCGGCCGGGAGAACCG +
Preference number: 4 (lower is better)
Translates to: SSSWLGGISIIRYSLGDLLAGLL*LRPGEP
Trigger: CGGTTCTCCCGGCCGGAGTCAGAGCAGGCCCGCCAG...CAAGTCACCCAGTGAGTACCTGATGATGCTGATGCCACCCAGCCAGGAGGAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564750.5
ENST00000565551.5
CDS-3UTR TCA 90 bp GTCGAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGCTGGCGGGCCTGCTCTaGCTCCGGCCGGGAGAACCG +
Preference number: 4 (lower is better)
Translates to: VEALLLVPPFFLGLRFAGLAGLL*LRPGEP
Trigger: CGGTTCTCCCGGCCGGAGTCAGAGCAGGCCCGCCAG...CCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTCGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp CTCCGGCCGGGAGAACCGCACCGTGATCTGCTTAACATCGTCTTCCGCCTCATCGCAGGCACGCCGCTGTaGGGGCTGGACGAGTCCTTG +
Preference number: 4 (lower is better)
Translates to: LRPGEPHRDLLNIVFRLIAGTPL*GLDESL
Trigger: CAAGGACTCGTCCAGCCCTCACAGCGGCGTGCCTGC...GATGAGGCGGAAGACGATGTTAAGCAGATCACGGTGCGGTTCTCCCGGCCGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564750.5
CDS-3UTR TCA 90 bp CCGCAGCCCGCCCGAGAGGCAGCCCGTTGGCCAGCTTGCTGTGGAGGCCGCTGGAAAACCTGTCGATGCTaGTCACTCATGTCTCCAGAC +
Preference number: 4 (lower is better)
Translates to: PQPAREAARWPACCGGRWKTCRC*SLMSPD
Trigger: GTCTGGAGACATGAGTGATCAGCATCGACAGGTTTT...CCAGCGGCCTCCACAGCAAGCTGGCCAACGGGCTGCCTCTCGGGCGGGCTGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564750.5
CDS-3UTR GCA 90 bp CGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTCAGTTACCCGCGGGCTaGAGAGACGGCGGCGGCCCG +
Preference number: 4 (lower is better)
Translates to: RLKQVEALLLVPPFFLGLQLPAG*RDGGGP
Trigger: CGGGCCGCCGCCGTCTCTGCAGCCCGCGGGTAACTG...AAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAATGCCACAGGTCCAGTTACCCGCGGGCTaGAGAGACGGCGGCGGCCCG +
Preference number: 4 (lower is better)
Translates to: RLAEDNPFCPLHRAMPQVQLPAG*RDGGGP
Trigger: CGGGCCGCCGCCGTCTCTGCAGCCCGCGGGTAACTG...GACCTGTGGCATTGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp AAGCTGACCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCACAGTTACCCGCGGGCTaGAGAGACGGCGGCGGCCCG +
Preference number: 4 (lower is better)
Translates to: KLTLRLAEDNPFCPLHRAQLPAG*RDGGGP
Trigger: CGGGCCGCCGCCGTCTCTGCAGCCCGCGGGTAACTG...TGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGGTCAGCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CCAGGGCTCCTCTGCGTGCTTCTTCTGCAGGAACTCATAGGACTGCACACGGCGGACTGCACACGGCGCTaGCGGGCCTGCTCTGACTCC +
Preference number: 4 (lower is better)
Translates to: PGLLCVLLLQELIGLHTADCTRR*RACSDS
Trigger: GGAGTCAGAGCAGGCCCGCCAGCGCCGTGTGCAGTC...CGCCGTGTGCAGTCCTATGAGTTCCTGCAGAAGAAGCACGCAGAGGAGCCCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564750.5
ENST00000565551.5
CDS-3UTR CCA 90 bp CCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAATGCCACGTGCTGGCGCAGCCCTaGGGCGGGTGCCCGTTGAAG +
Preference number: 4 (lower is better)
Translates to: PCDWLRIIPSVHCTVQCHVLAQP*GGCPLK
Trigger: CTTCAACGGGCACCCGCCCCAGGGCTGCGCCAGCAC...GTGGCATTGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp TCCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCGAGCCACAGGGGTGCTaGCGCAGCCCTGGGGCGGGT +
Preference number: 4 (lower is better)
Translates to: SSCSVSSEASRGPTSGSAEPQGC*RSPGAG
Trigger: ACCCGCCCCAGGGCTGCGCCAGCACCCCTGTGGCTC...GGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAATGCCACAGGTCGAGCCACAGGGGTGCTaGCGCAGCCCTGGGGCGGGT +
Preference number: 4 (lower is better)
Translates to: RLAEDNPFCPLHRAMPQVEPQGC*RSPGAG
Trigger: ACCCGCCCCAGGGCTGCGCCAGCACCCCTGTGGCTC...GACCTGTGGCATTGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp TCGTCTTCCGCCTCATCCTGTGAAGAGTCCCCTGCCTCGTTGGCCGCCTCCCTCGGGCACAGCAGGTACTaGCGCTCATGCTCAGAGCGA +
Preference number: 4 (lower is better)
Translates to: SSSASSCEESPASLAASLGHSRY*RSCSER
Trigger: TCGCTCTGAGCATGAGCGTCAGTACCTGCTGTGCCC...GAGGGAGGCGGCCAACGAGGCAGGGGACTCTTCACAGGATGAGGCGGAAGACGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564750.5
ENST00000565551.5
CDS-3UTR TCA 90 bp AGAGCGACTGTCCCTCAGGCCATAGTAATGCAGGTGGACCCAGGGCTCCTCTGCGTTCTCCACCCCGCTTaGGCCGGGGCACAGCAGGTA +
Preference number: 4 (lower is better)
Translates to: RATVPQAIVMQVDPGLLCVLHPA*AGAQQV
Trigger: TACCTGCTGTGCCCCGGCTCAAGCGGGGTGGAGAAC...GCAGAGGAGCCCTGGGTCCACCTGCATTACTATGGCCTGAGGGACAGTCGCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564750.5
ENST00000565551.5
CDS-3UTR TCA 90 bp GCAGCGTGCGCAGCTGGGCCATCGACAGGACGTTGCTGGGGGCCACAGGCTTGTACTCACTGGGTGACTTaGCGAGCTCCGTGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: AACAAGPSTGRCWGPQACTHWVT*RAPCSP
Trigger: TGGAGAACACGGAGCTCGTCAAGTCACCCAGTGAGT...ACAAGCCTGTGGCCCCCAGCAACGTCCTGTCGATGGCCCAGCTGCGCACGCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000564750.5
ENST00000565551.5
CDS-3UTR TCA 90 bp CCGTTGGCCAGCTTGCTGTGGAGGCCGCTGGGGGAAGTGTCCATGGGCTCCTCCCAGGTACTCACTGGGTaGCTTGACGAGCTCCGTGTT +
Preference number: 4 (lower is better)
Translates to: PLASLLWRPLGEVSMGSSQVLTG*LDELRV
Trigger: AACACGGAGCTCGTCAAGTCACCCAGTGAGTACCTG...GGAGGAGCCCATGGACACTTCCCCCAGCGGCCTCCACAGCAAGCTGGCCAACGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564750.5
CDS-3UTR TCA 90 bp CCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCGCAGGCACGCCGCTGTaGGGGCTGGACGAGTCCTTG +
Preference number: 4 (lower is better)
Translates to: PLALCRLKQVEALLLVPPAGTPL*GLDESL
Trigger: CAAGGACTCGTCCAGCCCTCACAGCGGCGTGCCTGC...GGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp CCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAATGCCACTCACGGGCTCCTCCTTaGTCCGCACACCGGGCGGGA +
Preference number: 4 (lower is better)
Translates to: PCDWLRIIPSVHCTVQCHSRAPP*SAHRAG
Trigger: TCCCGCCCGGTGTGCGGATCAAGGAGGAGCCCGTGA...GTGGCATTGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp CGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAATGCCACAGGTCGGGGCGGGTGCCCGTTaGAGCTGTCTGTGCCCGCAG +
Preference number: 4 (lower is better)
Translates to: RLAEDNPFCPLHRAMPQVGAGAR*SCLCPQ
Trigger: CTGCGGGCACAGACAGCTTCAACGGGCACCCGCCCC...GACCTGTGGCATTGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp CGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTGGGGCGGGTGCCCGTTaGAGCTGTCTGTGCCCGCAG +
Preference number: 4 (lower is better)
Translates to: RLKQVEALLLVPPFFLGLGAGAR*SCLCPQ
Trigger: CTGCGGGCACAGACAGCTTCAACGGGCACCCGCCCC...AAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp CCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAATGCCACGGTCCGAGATGCCGCTaGAGAGTGTGTGGCCGGGGG +
Preference number: 4 (lower is better)
Translates to: PCDWLRIIPSVHCTVQCHGPRCR*RVCGRG
Trigger: CCCCCGGCCACACACTCTTCAGCGGCATCTCGGACC...GTGGCATTGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTGCAGGCACCCGCAGCTaGTCCTTCCGCCGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: RLKQVEALLLVPPFFLGLAGTRS*SFRRCS
Trigger: GCTGCAGCGGCGGAAGGAGCAGCTGCGGGTGCCTGC...AAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CCAGGAAGTCCTTCACATCCTCGGCGCAGAGTTTGGTCACGGTTGCCACCTCTTGCAGGCACCCGCAGCTaGTCCTTCCGCCGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: PGSPSHPRRRVWSRLPPLAGTRS*SFRRCS
Trigger: GCTGCAGCGGCGGAAGGAGCAGCTGCGGGTGCCTGC...AAGAGGTGGCAACCGTGACCAAACTCTGCGCCGAGGATGTGAAGGACTTCCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564750.5
CDS-3UTR CCA 90 bp CGTCTTCCGCCTCATCCTGTGAAGAGTCCCCTGCCTCGTTGGCCGCCTCCCTCTCCCTCTCCCGGTGCTTaGCGTCAGCCTTATCCAGGT +
Preference number: 4 (lower is better)
Translates to: RLPPHPVKSPLPRWPPPSPSPGA*RQPYPG
Trigger: ACCTGGATAAGGCTGACGCCAAGCACCGGGAGAGGG...AGAGGGAGGCGGCCAACGAGGCAGGGGACTCTTCACAGGATGAGGCGGAAGACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564750.5
ENST00000565551.5
CDS-3UTR CCA 90 bp CAGGTGGACCCAGGGCTCCTCTGCGTGCTTCTTCTGCAGGAACTCATAGGACTGAGTCCCCTGCCTCGTTaGCCGCCTCCCTCTCCCGGT +
Preference number: 4 (lower is better)
Translates to: QVDPGLLCVLLLQELIGLSPLPR*PPPSPG
Trigger: ACCGGGAGAGGGAGGCGGCCAACGAGGCAGGGGACT...CAGTCCTATGAGTTCCTGCAGAAGAAGCACGCAGAGGAGCCCTGGGTCCACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564750.5
ENST00000565551.5
CDS-3UTR CCA 90 bp CCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCGACTGCACACGGCGCTaGCGGGCCTGCTCTGACTCC +
Preference number: 4 (lower is better)
Translates to: PLALCRLKQVEALLLVPPDCTRR*RACSDS
Trigger: GGAGTCAGAGCAGGCCCGCCAGCGCCGTGTGCAGTC...GGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp AGGTACTCACTGGGTGACTTGACGAGCTCCGTGTTCTCCACCCCGCTTGAGCCGGGCAGCGTGCGCAGCTaGGCCATCGACAGGACGTTG +
Preference number: 4 (lower is better)
Translates to: RYSLGDLTSSVFSTPLEPGSVRS*AIDRTL
Trigger: CAACGTCCTGTCGATGGCCCAGCTGCGCACGCTGCC...CGGCTCAAGCGGGGTGGAGAACACGGAGCTCGTCAAGTCACCCAGTGAGTACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564750.5
ENST00000565551.5
CDS-3UTR CCA 90 bp CTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCTTCGTGCTGGCGCAGCCCTaGGGCGGGTGCCCGTTGAAG +
Preference number: 4 (lower is better)
Translates to: LALCRLKQVEALLLVPPFVLAQP*GGCPLK
Trigger: CTTCAACGGGCACCCGCCCCAGGGCTGCGCCAGCAC...GAAGGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp AAGCTGACCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAGTGCTGGCGCAGCCCTaGGGCGGGTGCCCGTTGAAG +
Preference number: 4 (lower is better)
Translates to: KLTLRLAEDNPFCPLHRAVLAQP*GGCPLK
Trigger: CTTCAACGGGCACCCGCCCCAGGGCTGCGCCAGCAC...TGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGGTCAGCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTGTGCTGGCGCAGCCCTaGGGCGGGTGCCCGTTGAAG +
Preference number: 4 (lower is better)
Translates to: RLKQVEALLLVPPFFLGLVLAQP*GGCPLK
Trigger: CTTCAACGGGCACCCGCCCCAGGGCTGCGCCAGCAC...AAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp GTCGAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGGTGCTGGCGCAGCCCTaGGGCGGGTGCCCGTTGAAG +
Preference number: 4 (lower is better)
Translates to: VEALLLVPPFFLGLRFAGVLAQP*GGCPLK
Trigger: CTTCAACGGGCACCCGCCCCAGGGCTGCGCCAGCAC...CCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTCGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CCACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGGAGCCACAGGGGTGCTaGCGCAGCCCTGGGGCGGGT +
Preference number: 4 (lower is better)
Translates to: PLHRAMPQVMRWSVPLALEPQGC*RSPGAG
Trigger: ACCCGCCCCAGGGCTGCGCCAGCACCCCTGTGGCTC...CAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp CGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGTCGTCTGCTGGCGGGCCTGCTCTaGCTCCGGCCGGGAGAACCG +
Preference number: 4 (lower is better)
Translates to: RAMPQVMRWSVPLALCRLLAGLL*LRPGEP
Trigger: CGGTTCTCCCGGCCGGAGTCAGAGCAGGCCCGCCAG...CAGACGACACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp TGTCCACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGGCGGGCCTGCTCTaGCTCCGGCCGGGAGAACCG +
Preference number: 4 (lower is better)
Translates to: CPLHRAMPQVMRWSVPLALAGLL*LRPGEP
Trigger: CGGTTCTCCCGGCCGGAGTCAGAGCAGGCCCGCCAG...AGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGTGGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp GTGCGCAGCTGGGCCATCGACAGGACGTTGCTGGGGGCCACAGGCTTGTCTTTCATCAGGATCTTGATCTaGTCGGCCAGGGGCAGCGTG +
Preference number: 4 (lower is better)
Translates to: VRSWAIDRTLLGATGLSFIRILI*SARGSV
Trigger: CACGCTGCCCCTGGCCGATCAGATCAAGATCCTGAT...GAAAGACAAGCCTGTGGCCCCCAGCAACGTCCTGTCGATGGCCCAGCTGCGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000564750.5
ENST00000565551.5
CDS-3UTR TCA 90 bp CGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTGCAGGCACGCCGCTGTaGGGGCTGGACGAGTCCTTG +
Preference number: 4 (lower is better)
Translates to: RLKQVEALLLVPPFFLGLAGTPL*GLDESL
Trigger: CAAGGACTCGTCCAGCCCTCACAGCGGCGTGCCTGC...AAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp TCCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCTCACGGGCTCCTCCTTaGTCCGCACACCGGGCGGGA +
Preference number: 4 (lower is better)
Translates to: SSCSVSSEASRGPTSGSASRAPP*SAHRAG
Trigger: TCCCGCCCGGTGTGCGGATCAAGGAGGAGCCCGTGA...GGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp CGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTTCACGGGCTCCTCCTTaGTCCGCACACCGGGCGGGA +
Preference number: 4 (lower is better)
Translates to: RLKQVEALLLVPPFFLGLSRAPP*SAHRAG
Trigger: TCCCGCCCGGTGTGCGGATCAAGGAGGAGCCCGTGA...AAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp CTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCTTCTCACGGGCTCCTCCTTaGTCCGCACACCGGGCGGGA +
Preference number: 4 (lower is better)
Translates to: LALCRLKQVEALLLVPPFSRAPP*SAHRAG
Trigger: TCCCGCCCGGTGTGCGGATCAAGGAGGAGCCCGTGA...GAAGGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp CTTAAGCTGACCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGGGGCGGGTGCCCGTTaGAGCTGTCTGTGCCCGCAG +
Preference number: 4 (lower is better)
Translates to: LKLTLRLAEDNPFCPLHRGAGAR*SCLCPQ
Trigger: CTGCGGGCACAGACAGCTTCAACGGGCACCCGCCCC...ACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGGTCAGCTTAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp CGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTGGTCCGAGATGCCGCTaGAGAGTGTGTGGCCGGGGG +
Preference number: 4 (lower is better)
Translates to: RLKQVEALLLVPPFFLGLGPRCR*RVCGRG
Trigger: CCCCCGGCCACACACTCTTCAGCGGCATCTCGGACC...AAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp CTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCTTCGGTCCGAGATGCCGCTaGAGAGTGTGTGGCCGGGGG +
Preference number: 4 (lower is better)
Translates to: LALCRLKQVEALLLVPPFGPRCR*RVCGRG
Trigger: CCCCCGGCCACACACTCTTCAGCGGCATCTCGGACC...GAAGGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGTCGTCAGTTACCCGCGGGCTaGAGAGACGGCGGCGGCCCG +
Preference number: 4 (lower is better)
Translates to: HRAMPQVMRWSVPLALCRQLPAG*RDGGGP
Trigger: CGGGCCGCCGCCGTCTCTGCAGCCCGCGGGTAACTG...ACGACACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp TGGATACCCGTCCACAGCATGTGCTGCCGCTGGACCACATCCGGGTGCTTCTTGCGAAGTCTCGGCCCCTaGAGAGCACCTCAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: WIPVHSMCCRWTTSGCFLRSLGP*RAPQQA
Trigger: TGCCTGCTGAGGTGCTCTGCAGGGGCCGAGACTTCG...CAAGAAGCACCCGGATGTGGTCCAGCGGCAGCACATGCTGTGGACGGGTATCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564750.5
CDS-3UTR GCA 90 bp CTGGGTGACTTGACGAGCTCCGTGTTCTCCACCCCGCTTGAGCCGGGGCACAGCCTCACCACGGCCATGTaGTCCAGGAAGTCCTTCACA +
Preference number: 4 (lower is better)
Translates to: LGDLTSSVFSTPLEPGHSLTTAM*SRKSFT
Trigger: TGTGAAGGACTTCCTGGAGCACATGGCCGTGGTGAG...GCTGTGCCCCGGCTCAAGCGGGGTGGAGAACACGGAGCTCGTCAAGTCACCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564750.5
CDS-3UTR GCA 90 bp GCTCCGTTCCCTCTAGATACACGTAACGCTGAGCCCAACAAGATCGCCTTCCTGGCAGGCACCCGCAGCTaGTCCTTCCGCCGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: APFPLDTRNAEPNKIAFLAGTRS*SFRRCS
Trigger: GCTGCAGCGGCGGAAGGAGCAGCTGCGGGTGCCTGC...CAGGAAGGCGATCTTGTTGGGCTCAGCGTTACGTGTATCTAGAGGGAACGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp GTTCCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGGCCCGTTGGCCAGCTTaGTGTGGAGGCCGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: VPLALCRLKQVEALLLVPARWPA*CGGRWG
Trigger: CCCCCAGCGGCCTCCACAGCAAGCTGGCCAACGGGC...CGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGGAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp GCTCCGTTCCCTCTAGATACACGTAACGCTGAGCCCAACAAGATCGCCTTCCTGGCCCGTTGGCCAGCTTaGTGTGGAGGCCGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: APFPLDTRNAEPNKIAFLARWPA*CGGRWG
Trigger: CCCCCAGCGGCCTCCACAGCAAGCTGGCCAACGGGC...CAGGAAGGCGATCTTGTTGGGCTCAGCGTTACGTGTATCTAGAGGGAACGGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp TCGGCGCAGGCCCCGTCCACGTTCAGCGCAATCTGCTCCCCTTTGCTGCGGCAATGCTGCGGCAATAGTTaGGGTTCAGGGTGTCGATGG +
Preference number: 4 (lower is better)
Translates to: SAQAPSTFSAICSPLLRQCCGNS*GSGCRW
Trigger: CCATCGACACCCTGAACCCCAACTATTGCCGCAGCA...TTGCCGCAGCAAAGGGGAGCAGATTGCGCTGAACGTGGACGGGGCCTGCGCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561494.5
CDS-3UTR CCA 90 bp GCGGAATGTCATCGTAGGTCATCGAGGCTGGACGCACAGGGTACCACGGTCTCGTCGAGGAATACGTGCTaGTCTCGTCGGCGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: AECHRRSSRLDAQGTTVSSRNTC*SRRRRP
Trigger: GGGCCTGCGCCGACGAGACCAGCACGTATTCCTCGA...CGAGACCGTGGTACCCTGTGCGTCCAGCCTCGATGACCTACGATGACATTCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561494.5
CDS-3UTR CCA 90 bp CTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCTTCAGTCCCCTGCCTCGTTaGCCGCCTCCCTCTCCCGGT +
Preference number: 4 (lower is better)
Translates to: LALCRLKQVEALLLVPPFSPLPR*PPPSPG
Trigger: ACCGGGAGAGGGAGGCGGCCAACGAGGCAGGGGACT...GAAGGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAATGCCACAGGTCAGTCCCCTGCCTCGTTaGCCGCCTCCCTCTCCCGGT +
Preference number: 4 (lower is better)
Translates to: RLAEDNPFCPLHRAMPQVSPLPR*PPPSPG
Trigger: ACCGGGAGAGGGAGGCGGCCAACGAGGCAGGGGACT...GACCTGTGGCATTGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp TCCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCGACTGCACACGGCGCTaGCGGGCCTGCTCTGACTCC +
Preference number: 4 (lower is better)
Translates to: SSCSVSSEASRGPTSGSADCTRR*RACSDS
Trigger: GGAGTCAGAGCAGGCCCGCCAGCGCCGTGTGCAGTC...GGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCTTCGACTGCACACGGCGCTaGCGGGCCTGCTCTGACTCC +
Preference number: 4 (lower is better)
Translates to: LALCRLKQVEALLLVPPFDCTRR*RACSDS
Trigger: GGAGTCAGAGCAGGCCCGCCAGCGCCGTGTGCAGTC...GAAGGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp TCGTCTTCCGCCTCATCCTGTGAAGAGTCCCCTGCCTCGTTGGCCGCCTCCCTCCCTCGGCGCAGAGTTTaGTCACGGTTGCCACCTCTT +
Preference number: 4 (lower is better)
Translates to: SSSASSCEESPASLAASLPRRRV*SRLPPL
Trigger: AAGAGGTGGCAACCGTGACCAAACTCTGCGCCGAGG...GAGGGAGGCGGCCAACGAGGCAGGGGACTCTTCACAGGATGAGGCGGAAGACGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564750.5
CDS-3UTR CCA 90 bp TGGATACCCGTCCACAGCATGTGCTGCCGCTGGACCACATCCGGGTGCTTCTTGGCTACTTGGATCCGCTaGTCCCCACAGACCAGCCCG +
Preference number: 4 (lower is better)
Translates to: WIPVHSMCCRWTTSGCFLATWIR*SPQTSP
Trigger: CGGGCTGGTCTGTGGGGACCAGCGGATCCAAGTAGC...CAAGAAGCACCCGGATGTGGTCCAGCGGCAGCACATGCTGTGGACGGGTATCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564750.5
CDS-3UTR CCA 90 bp CCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCCGAGAGGCAGCCCGTTaGCCAGCTTGCTGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: PLALCRLKQVEALLLVPPREAAR*PACCGG
Trigger: GCCTCCACAGCAAGCTGGCCAACGGGCTGCCTCTCG...GGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp GCTGCAGGATGCCATGTAAAGGTGTCAGGTGGAGCTCACCTTGCCTGTAGAGTGGTGCTGGCGCAGCCCTaGGGCGGGTGCCCGTTGAAG +
Preference number: 4 (lower is better)
Translates to: AAGCHVKVSGGAHLACRVVLAQP*GGCPLK
Trigger: CTTCAACGGGCACCCGCCCCAGGGCTGCGCCAGCAC...CACTCTACAGGCAAGGTGAGCTCCACCTGACACCTTTACATGGCATCCTGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564750.5
CDS-3UTR CCA 90 bp GAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGTTAGAGCCACAGGGGTGCTaGCGCAGCCCTGGGGCGGGT +
Preference number: 4 (lower is better)
Translates to: EALLLVPPFFLGLRFAGLEPQGC*RSPGAG
Trigger: ACCCGCCCCAGGGCTGCGCCAGCACCCCTGTGGCTC...TAACCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp TGTCCACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTGAGCCACAGGGGTGCTaGCGCAGCCCTGGGGCGGGT +
Preference number: 4 (lower is better)
Translates to: CPLHRAMPQVMRWSVPLAEPQGC*RSPGAG
Trigger: ACCCGCCCCAGGGCTGCGCCAGCACCCCTGTGGCTC...AGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGTGGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp GGCACCAGTATCTGCTTGCAACCGGCGGCCAGCACCGTGTCCTGTAGCATGCGGGGGCTTGATCTTGGCTaGGAGGTGCGGAATGTCATC +
Preference number: 4 (lower is better)
Translates to: GTSICLQPAASTVSCSMRGLDLG*EVRNVI
Trigger: GATGACATTCCGCACCTCTCAGCCAAGATCAAGCCC...CCGCATGCTACAGGACACGGTGCTGGCCGCCGGTTGCAAGCAGATACTGGTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564750.5
CDS-3UTR TCA 90 bp AAGCTGACCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAGTTCTCCACCCCGCTTaGGCCGGGGCACAGCAGGTA +
Preference number: 4 (lower is better)
Translates to: KLTLRLAEDNPFCPLHRAVLHPA*AGAQQV
Trigger: TACCTGCTGTGCCCCGGCTCAAGCGGGGTGGAGAAC...TGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGGTCAGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp CTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCTTCGTTCTCCACCCCGCTTaGGCCGGGGCACAGCAGGTA +
Preference number: 4 (lower is better)
Translates to: LALCRLKQVEALLLVPPFVLHPA*AGAQQV
Trigger: TACCTGCTGTGCCCCGGCTCAAGCGGGGTGGAGAAC...GAAGGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp CTGGGTGACTTGACGAGCTCCGTGTTCTCCACCCCGCTTGAGCCGGGGCACAGCTCTTCATCAGGATCTTaGTCTGATCGGCCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: LGDLTSSVFSTPLEPGHSSSSGS*SDRPGA
Trigger: TGCCCCTGGCCGATCAGATCAAGATCCTGATGAAGA...GCTGTGCCCCGGCTCAAGCGGGGTGGAGAACACGGAGCTCGTCAAGTCACCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000564750.5
ENST00000565551.5
CDS-3UTR TCA 90 bp CCACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGGCAGGCACGCCGCTGTaGGGGCTGGACGAGTCCTTG +
Preference number: 4 (lower is better)
Translates to: PLHRAMPQVMRWSVPLALAGTPL*GLDESL
Trigger: CAAGGACTCGTCCAGCCCTCACAGCGGCGTGCCTGC...CAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp ACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGGGGGCGGGTGCCCGTTaGAGCTGTCTGTGCCCGCAG +
Preference number: 4 (lower is better)
Translates to: TAPCNATGHEMVSSSCSVGAGAR*SCLCPQ
Trigger: CTGCGGGCACAGACAGCTTCAACGGGCACCCGCCCC...CACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp CGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGTCGTCTGGGGGCGGGTGCCCGTTaGAGCTGTCTGTGCCCGCAG +
Preference number: 4 (lower is better)
Translates to: RAMPQVMRWSVPLALCRLGAGAR*SCLCPQ
Trigger: CTGCGGGCACAGACAGCTTCAACGGGCACCCGCCCC...CAGACGACACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp GCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGTTAGTACAGTTACCCGCGGGCTaGAGAGACGGCGGCGGCCCG +
Preference number: 4 (lower is better)
Translates to: ALLLVPPFFLGLRFAGLVQLPAG*RDGGGP
Trigger: CGGGCCGCCGCCGTCTCTGCAGCCCGCGGGTAACTG...TACTAACCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCGCCTCCCTCTCCCGGTaGTTGGCGTCAGCCTTATCC +
Preference number: 4 (lower is better)
Translates to: PLALCRLKQVEALLLVPPASLSR*LASALS
Trigger: GGATAAGGCTGACGCCAAGCACCGGGAGAGGGAGGC...GGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAATGCCACGCCTCCCTCTCCCGGTaGTTGGCGTCAGCCTTATCC +
Preference number: 4 (lower is better)
Translates to: PCDWLRIIPSVHCTVQCHASLSR*LASALS
Trigger: GGATAAGGCTGACGCCAAGCACCGGGAGAGGGAGGC...GTGGCATTGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp TGTCCCTCAGGCCATAGTAATGCAGGTGGACCCAGGGCTCCTCTGCGTGCTTCTGCCTCCCTCTCCCGGTaGTTGGCGTCAGCCTTATCC +
Preference number: 4 (lower is better)
Translates to: CPSGHSNAGGPRAPLRASASLSR*LASALS
Trigger: GGATAAGGCTGACGCCAAGCACCGGGAGAGGGAGGC...AGAAGCACGCAGAGGAGCCCTGGGTCCACCTGCATTACTATGGCCTGAGGGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564750.5
ENST00000565551.5
CDS-3UTR GCA 90 bp CAGGTGGACCCAGGGCTCCTCTGCGTGCTTCTTCTGCAGGAACTCATAGGACTGGCCTCCCTCTCCCGGTaGTTGGCGTCAGCCTTATCC +
Preference number: 4 (lower is better)
Translates to: QVDPGLLCVLLLQELIGLASLSR*LASALS
Trigger: GGATAAGGCTGACGCCAAGCACCGGGAGAGGGAGGC...CAGTCCTATGAGTTCCTGCAGAAGAAGCACGCAGAGGAGCCCTGGGTCCACCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564750.5
ENST00000565551.5
CDS-3UTR GCA 90 bp CCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAATGCCACGTCCACAGCATGTGCTaGCGCTGGACCACATCCGGG +
Preference number: 4 (lower is better)
Translates to: PCDWLRIIPSVHCTVQCHVHSMC*RWTTSG
Trigger: CCCGGATGTGGTCCAGCGGCAGCACATGCTGTGGAC...GTGGCATTGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCCCCGTCCACAGCATGTaGTGCCGCTGGACCACATCC +
Preference number: 4 (lower is better)
Translates to: PLALCRLKQVEALLLVPPPVHSM*CRWTTS
Trigger: GGATGTGGTCCAGCGGCAGCACATGCTGTGGACGGG...GGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp GAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGTTAGCAGGCACCCGCAGCTaGTCCTTCCGCCGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: EALLLVPPFFLGLRFAGLAGTRS*SFRRCS
Trigger: GCTGCAGCGGCGGAAGGAGCAGCTGCGGGTGCCTGC...TAACCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGTCGTCTGGCAGGCACCCGCAGCTaGTCCTTCCGCCGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: RAMPQVMRWSVPLALCRLAGTRS*SFRRCS
Trigger: GCTGCAGCGGCGGAAGGAGCAGCTGCGGGTGCCTGC...CAGACGACACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp TGTCCACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTGCCCGTTGGCCAGCTTaGTGTGGAGGCCGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: CPLHRAMPQVMRWSVPLAARWPA*CGGRWG
Trigger: CCCCCAGCGGCCTCCACAGCAAGCTGGCCAACGGGC...AGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGTGGACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAATGCCACAGGTCCAGCCCTGGGGCGGGTaGCCGTTGAAGCTGTCTGTG +
Preference number: 4 (lower is better)
Translates to: RLAEDNPFCPLHRAMPQVQPWGG*PLKLSV
Trigger: CACAGACAGCTTCAACGGGCACCCGCCCCAGGGCTG...GACCTGTGGCATTGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTCAGCCCTGGGGCGGGTaGCCGTTGAAGCTGTCTGTG +
Preference number: 4 (lower is better)
Translates to: RLKQVEALLLVPPFFLGLQPWGG*PLKLSV
Trigger: CACAGACAGCTTCAACGGGCACCCGCCCCAGGGCTG...AAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp AAGCTGACCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCACAGCCCTGGGGCGGGTaGCCGTTGAAGCTGTCTGTG +
Preference number: 4 (lower is better)
Translates to: KLTLRLAEDNPFCPLHRAQPWGG*PLKLSV
Trigger: CACAGACAGCTTCAACGGGCACCCGCCCCAGGGCTG...TGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGGTCAGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCTTCCAGCCCTGGGGCGGGTaGCCGTTGAAGCTGTCTGTG +
Preference number: 4 (lower is better)
Translates to: LALCRLKQVEALLLVPPFQPWGG*PLKLSV
Trigger: CACAGACAGCTTCAACGGGCACCCGCCCCAGGGCTG...GAAGGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp GTCCCTCAGGCCATAGTAATGCAGGTGGACCCAGGGCTCCTCTGCGTGCTTCTTGCACCAGTATCTGCTTaGAACCGGCGGCCAGCACCG +
Preference number: 4 (lower is better)
Translates to: VPQAIVMQVDPGLLCVLLAPVSA*NRRPAP
Trigger: CGGTGCTGGCCGCCGGTTGCAAGCAGATACTGGTGC...AAGAAGCACGCAGAGGAGCCCTGGGTCCACCTGCATTACTATGGCCTGAGGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564750.5
CDS-3UTR CCA 90 bp GGCCGGGAGAACCGCACCGTGATCTGCTTAACATCGTCTTCCGCCTCATCCTGTTCGAGGAATACGTGCTaGTCTCGTCGGCGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: GRENRTVICLTSSSASSCSRNTC*SRRRRP
Trigger: GGGCCTGCGCCGACGAGACCAGCACGTATTCCTCGA...ACAGGATGAGGCGGAAGACGATGTTAAGCAGATCACGGTGCGGTTCTCCCGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564750.5
ENST00000565551.5
CDS-3UTR CCA 90 bp CCACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGGACTGCACACGGCGCTaGCGGGCCTGCTCTGACTCC +
Preference number: 4 (lower is better)
Translates to: PLHRAMPQVMRWSVPLALDCTRR*RACSDS
Trigger: GGAGTCAGAGCAGGCCCGCCAGCGCCGTGTGCAGTC...CAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp GCTCCGTTCCCTCTAGATACACGTAACGCTGAGCCCAACAAGATCGCCTTCCTGGACTGCACACGGCGCTaGCGGGCCTGCTCTGACTCC +
Preference number: 4 (lower is better)
Translates to: APFPLDTRNAEPNKIAFLDCTRR*RACSDS
Trigger: GGAGTCAGAGCAGGCCCGCCAGCGCCGTGTGCAGTC...CAGGAAGGCGATCTTGTTGGGCTCAGCGTTACGTGTATCTAGAGGGAACGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CCCCGCTTGAGCCGGGGCACAGCAGGTACTGACGCTCATGCTCAGAGCGACTGTTCTCCTCCTCCTGGCTaGGTGGCATCAGCATCATCA +
Preference number: 4 (lower is better)
Translates to: PRLSRGTAGTDAHAQSDCSPPPG*VASASS
Trigger: TGATGATGCTGATGCCACCCAGCCAGGAGGAGGAGA...ACAGTCGCTCTGAGCATGAGCGTCAGTACCTGCTGTGCCCCGGCTCAAGCGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564750.5
ENST00000565551.5
CDS-3UTR CCA 90 bp TCCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCGGCAGCGTGCGCAGCTaGGCCATCGACAGGACGTTG +
Preference number: 4 (lower is better)
Translates to: SSCSVSSEASRGPTSGSAGSVRS*AIDRTL
Trigger: CAACGTCCTGTCGATGGCCCAGCTGCGCACGCTGCC...GGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCTTCGGCAGCGTGCGCAGCTaGGCCATCGACAGGACGTTG +
Preference number: 4 (lower is better)
Translates to: LALCRLKQVEALLLVPPFGSVRS*AIDRTL
Trigger: CAACGTCCTGTCGATGGCCCAGCTGCGCACGCTGCC...GAAGGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAATGCCACGCTACTTGGATCCGCTaGTCCCCACAGACCAGCCCG +
Preference number: 4 (lower is better)
Translates to: PCDWLRIIPSVHCTVQCHATWIR*SPQTSP
Trigger: CGGGCTGGTCTGTGGGGACCAGCGGATCCAAGTAGC...GTGGCATTGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp GGCCGGGAGAACCGCACCGTGATCTGCTTAACATCGTCTTCCGCCTCATCCTGTTGCTGTGGAGGCCGCTaGGGGAAGTGTCCATGGGCT +
Preference number: 4 (lower is better)
Translates to: GRENRTVICLTSSSASSCCCGGR*GKCPWA
Trigger: AGCCCATGGACACTTCCCCCAGCGGCCTCCACAGCA...ACAGGATGAGGCGGAAGACGATGTTAAGCAGATCACGGTGCGGTTCTCCCGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564750.5
CDS-3UTR CCA 90 bp CCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCTGCTGTGGAGGCCGCTaGGGGAAGTGTCCATGGGCT +
Preference number: 4 (lower is better)
Translates to: PLALCRLKQVEALLLVPPCCGGR*GKCPWA
Trigger: AGCCCATGGACACTTCCCCCAGCGGCCTCCACAGCA...GGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAATGCCACTTGGCCAGCTTGCTGTaGAGGCCGCTGGGGGAAGTG +
Preference number: 4 (lower is better)
Translates to: PCDWLRIIPSVHCTVQCHLASLL*RPLGEV
Trigger: CACTTCCCCCAGCGGCCTCCACAGCAAGCTGGCCAA...GTGGCATTGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp TGCGTGAACTTCCACATAACGAAGTCTCGGCCCCTGCAGAGCACCTCAGCAGGCTTGGCCAGCTTGCTGTaGAGGCCGCTGGGGGAAGTG +
Preference number: 4 (lower is better)
Translates to: CVNFHITKSRPLQSTSAGLASLL*RPLGEV
Trigger: CACTTCCCCCAGCGGCCTCCACAGCAAGCTGGCCAA...GCCTGCTGAGGTGCTCTGCAGGGGCCGAGACTTCGTTATGTGGAAGTTCACGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564750.5
CDS-3UTR CCA 90 bp CGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTCGAGAGGCAGCCCGTTaGCCAGCTTGCTGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: RLKQVEALLLVPPFFLGLREAAR*PACCGG
Trigger: GCCTCCACAGCAAGCTGGCCAACGGGCTGCCTCTCG...AAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp AAGCTGACCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCACGAGAGGCAGCCCGTTaGCCAGCTTGCTGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: KLTLRLAEDNPFCPLHRAREAAR*PACCGG
Trigger: GCCTCCACAGCAAGCTGGCCAACGGGCTGCCTCTCG...TGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGGTCAGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp TCCTCCTCCTGGCTGGGTGGCATCAGCATCATCAGGTACTCACTGGGTGACTTGCGAGAGGCAGCCCGTTaGCCAGCTTGCTGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: SSSWLGGISIIRYSLGDLREAAR*PACCGG
Trigger: GCCTCCACAGCAAGCTGGCCAACGGGCTGCCTCTCG...CAAGTCACCCAGTGAGTACCTGATGATGCTGATGCCACCCAGCCAGGAGGAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564750.5
CDS-3UTR CCA 90 bp GAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGTTAGTGCTGGCGCAGCCCTaGGGCGGGTGCCCGTTGAAG +
Preference number: 4 (lower is better)
Translates to: EALLLVPPFFLGLRFAGLVLAQP*GGCPLK
Trigger: CTTCAACGGGCACCCGCCCCAGGGCTGCGCCAGCAC...TAACCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp GCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGTTAGTAGAGCCACAGGGGTGCTaGCGCAGCCCTGGGGCGGGT +
Preference number: 4 (lower is better)
Translates to: ALLLVPPFFLGLRFAGLVEPQGC*RSPGAG
Trigger: ACCCGCCCCAGGGCTGCGCCAGCACCCCTGTGGCTC...TACTAACCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp CCACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGGTTCTCCACCCCGCTTaGGCCGGGGCACAGCAGGTA +
Preference number: 4 (lower is better)
Translates to: PLHRAMPQVMRWSVPLALVLHPA*AGAQQV
Trigger: TACCTGCTGTGCCCCGGCTCAAGCGGGGTGGAGAAC...CAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp ACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGGCAGGCACGCCGCTGTaGGGGCTGGACGAGTCCTTG +
Preference number: 4 (lower is better)
Translates to: TAPCNATGHEMVSSSCSVAGTPL*GLDESL
Trigger: CAAGGACTCGTCCAGCCCTCACAGCGGCGTGCCTGC...CACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp TGTCCACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTTCACGGGCTCCTCCTTaGTCCGCACACCGGGCGGGA +
Preference number: 4 (lower is better)
Translates to: CPLHRAMPQVMRWSVPLASRAPP*SAHRAG
Trigger: TCCCGCCCGGTGTGCGGATCAAGGAGGAGCCCGTGA...AGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGTGGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp GCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGTTAGTAGGGGCGGGTGCCCGTTaGAGCTGTCTGTGCCCGCAG +
Preference number: 4 (lower is better)
Translates to: ALLLVPPFFLGLRFAGLVGAGAR*SCLCPQ
Trigger: CTGCGGGCACAGACAGCTTCAACGGGCACCCGCCCC...TACTAACCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp TGTCCACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTGGTCCGAGATGCCGCTaGAGAGTGTGTGGCCGGGGG +
Preference number: 4 (lower is better)
Translates to: CPLHRAMPQVMRWSVPLAGPRCR*RVCGRG
Trigger: CCCCCGGCCACACACTCTTCAGCGGCATCTCGGACC...AGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGTGGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp TCTGCTTGTCCATCAGCTTCGAGGAATACGTGCTGGTCTCGTCGGCGCAGGCCCGATCTCAATCCGGTCTaGCCCCAGAGCCCCAGCTTT +
Preference number: 4 (lower is better)
Translates to: SACPSASRNTCWSRRRRPDLNPV*PQSPSF
Trigger: AAAGCTGGGGCTCTGGGGTCAGACCGGATTGAGATC...GGGCCTGCGCCGACGAGACCAGCACGTATTCCTCGAAGCTGATGGACAAGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561494.5
CDS-3UTR GCA 90 bp AAGCTGACCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAAGGCGGCGGCCATGTTaGTGGTGGAGAAACTCCGGC +
Preference number: 4 (lower is better)
Translates to: KLTLRLAEDNPFCPLHRARRRPC*WWRNSG
Trigger: GCCGGAGTTTCTCCACCAGCAACATGGCCGCCGCCT...TGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGGTCAGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299853.10
ENST00000564209.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp GTCGAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGGCCTCCCTCTCCCGGTaGTTGGCGTCAGCCTTATCC +
Preference number: 4 (lower is better)
Translates to: VEALLLVPPFFLGLRFAGASLSR*LASALS
Trigger: GGATAAGGCTGACGCCAAGCACCGGGAGAGGGAGGC...CCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTCGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCCCATCGACAGGACGTTaGTGGGGGCCACAGGCTTGT +
Preference number: 4 (lower is better)
Translates to: PLALCRLKQVEALLLVPPPSTGR*WGPQAC
Trigger: ACAAGCCTGTGGCCCCCAGCAACGTCCTGTCGATGG...GGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp TGTCCCTCAGGCCATAGTAATGCAGGTGGACCCAGGGCTCCTCTGCGTGCTTCTCCATCGACAGGACGTTaGTGGGGGCCACAGGCTTGT +
Preference number: 4 (lower is better)
Translates to: CPSGHSNAGGPRAPLRASPSTGR*WGPQAC
Trigger: ACAAGCCTGTGGCCCCCAGCAACGTCCTGTCGATGG...AGAAGCACGCAGAGGAGCCCTGGGTCCACCTGCATTACTATGGCCTGAGGGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000564750.5
ENST00000565551.5
CDS-3UTR GCA 90 bp CTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCTTCTCGCCACCTTCTGGATaGCCCGCAGAACAGCCACGG +
Preference number: 4 (lower is better)
Translates to: LALCRLKQVEALLLVPPFSPPSG*PAEQPR
Trigger: CCGTGGCTGTTCTGCGGGGCATCCAGAAGGTGGCGA...GAAGGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp GTCGAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGTCGCCACCTTCTGGATaGCCCGCAGAACAGCCACGG +
Preference number: 4 (lower is better)
Translates to: VEALLLVPPFFLGLRFAGSPPSG*PAEQPR
Trigger: CCGTGGCTGTTCTGCGGGGCATCCAGAAGGTGGCGA...CCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTCGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTTCGCCACCTTCTGGATaGCCCGCAGAACAGCCACGG +
Preference number: 4 (lower is better)
Translates to: RLKQVEALLLVPPFFLGLSPPSG*PAEQPR
Trigger: CCGTGGCTGTTCTGCGGGGCATCCAGAAGGTGGCGA...AAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp TCCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCGAAGTCTCGGCCCCTaGAGAGCACCTCAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: SSCSVSSEASRGPTSGSARSLGP*RAPQQA
Trigger: TGCCTGCTGAGGTGCTCTGCAGGGGCCGAGACTTCG...GGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp AAGCTGACCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCACGAAGTCTCGGCCCCTaGAGAGCACCTCAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: KLTLRLAEDNPFCPLHRARSLGP*RAPQQA
Trigger: TGCCTGCTGAGGTGCTCTGCAGGGGCCGAGACTTCG...TGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGGTCAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCTTCCGAAGTCTCGGCCCCTaGAGAGCACCTCAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: LALCRLKQVEALLLVPPFRSLGP*RAPQQA
Trigger: TGCCTGCTGAGGTGCTCTGCAGGGGCCGAGACTTCG...GAAGGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp GCGACTGTCCCTCAGGCCATAGTAATGCAGGTGGACCCAGGGCTCCTCTGCGTGACCACCCAGCGGCTCTaGGTGAACTTCCACATAACG +
Preference number: 4 (lower is better)
Translates to: ATVPQAIVMQVDPGLLCVTTQRL*VNFHIT
Trigger: CGTTATGTGGAAGTTCACGCAGAGCCGCTGGGTGGT...CACGCAGAGGAGCCCTGGGTCCACCTGCATTACTATGGCCTGAGGGACAGTCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564750.5
CDS-3UTR GCA 90 bp CTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCTTCGTCCACAGCATGTGCTaGCGCTGGACCACATCCGGG +
Preference number: 4 (lower is better)
Translates to: LALCRLKQVEALLLVPPFVHSMC*RWTTSG
Trigger: CCCGGATGTGGTCCAGCGGCAGCACATGCTGTGGAC...GAAGGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp TCCTCCTCCTGGCTGGGTGGCATCAGCATCATCAGGTACTCACTGGGTGACTTGGTCCACAGCATGTGCTaGCGCTGGACCACATCCGGG +
Preference number: 4 (lower is better)
Translates to: SSSWLGGISIIRYSLGDLVHSMC*RWTTSG
Trigger: CCCGGATGTGGTCCAGCGGCAGCACATGCTGTGGAC...CAAGTCACCCAGTGAGTACCTGATGATGCTGATGCCACCCAGCCAGGAGGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564750.5
CDS-3UTR GCA 90 bp GTCGAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGGTCCACAGCATGTGCTaGCGCTGGACCACATCCGGG +
Preference number: 4 (lower is better)
Translates to: VEALLLVPPFFLGLRFAGVHSMC*RWTTSG
Trigger: CCCGGATGTGGTCCAGCGGCAGCACATGCTGTGGAC...CCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTCGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCTTCCCCGTCCACAGCATGTaGTGCCGCTGGACCACATCC +
Preference number: 4 (lower is better)
Translates to: LALCRLKQVEALLLVPPFPVHSM*CRWTTS
Trigger: GGATGTGGTCCAGCGGCAGCACATGCTGTGGACGGG...GAAGGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp AAGCTGACCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCACCCGTCCACAGCATGTaGTGCCGCTGGACCACATCC +
Preference number: 4 (lower is better)
Translates to: KLTLRLAEDNPFCPLHRAPVHSM*CRWTTS
Trigger: GGATGTGGTCCAGCGGCAGCACATGCTGTGGACGGG...TGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGGTCAGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAATGCCACAGGTCCCCGTCCACAGCATGTaGTGCCGCTGGACCACATCC +
Preference number: 4 (lower is better)
Translates to: RLAEDNPFCPLHRAMPQVPVHSM*CRWTTS
Trigger: GGATGTGGTCCAGCGGCAGCACATGCTGTGGACGGG...GACCTGTGGCATTGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CCAGGAAGTCCTTCACATCCTCGGCGCAGAGTTTGGTCACGGTTGCCACCTCTTCCCGTCCACAGCATGTaGTGCCGCTGGACCACATCC +
Preference number: 4 (lower is better)
Translates to: PGSPSHPRRRVWSRLPPLPVHSM*CRWTTS
Trigger: GGATGTGGTCCAGCGGCAGCACATGCTGTGGACGGG...AAGAGGTGGCAACCGTGACCAAACTCTGCGCCGAGGATGTGAAGGACTTCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564750.5
CDS-3UTR GCA 90 bp GCAGGTACTGACGCTCATGCTCAGAGCGACTGTCCCTCAGGCCATAGTAATGCACAGCCCTGGGGCGGGTaGCCGTTGAAGCTGTCTGTG +
Preference number: 4 (lower is better)
Translates to: AGTDAHAQSDCPSGHSNAQPWGG*PLKLSV
Trigger: CACAGACAGCTTCAACGGGCACCCGCCCCAGGGCTG...TGCATTACTATGGCCTGAGGGACAGTCGCTCTGAGCATGAGCGTCAGTACCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564750.5
CDS-3UTR GCA 90 bp TCCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCGCACCAGTATCTGCTTaGAACCGGCGGCCAGCACCG +
Preference number: 4 (lower is better)
Translates to: SSCSVSSEASRGPTSGSAAPVSA*NRRPAP
Trigger: CGGTGCTGGCCGCCGGTTGCAAGCAGATACTGGTGC...GGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp AAGCTGACCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAGCACCAGTATCTGCTTaGAACCGGCGGCCAGCACCG +
Preference number: 4 (lower is better)
Translates to: KLTLRLAEDNPFCPLHRAAPVSA*NRRPAP
Trigger: CGGTGCTGGCCGCCGGTTGCAAGCAGATACTGGTGC...TGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGGTCAGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp GTGCGCAGCTGGGCCATCGACAGGACGTTGCTGGGGGCCACAGGCTTGTCTTTCCAATCTGCTCCCCTTTaGTTCTGCTGCTTGGGCTTG +
Preference number: 4 (lower is better)
Translates to: VRSWAIDRTLLGATGLSFQSAPL*FCCLGL
Trigger: CAAGCCCAAGCAGCAGAAGCAAAGGGGAGCAGATTG...GAAAGACAAGCCTGTGGCCCCCAGCAACGTCCTGTCGATGGCCCAGCTGCGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564750.5
CDS-3UTR CCA 90 bp CTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCTTCCGGCGGCCATGTTGCTaGTGGAGAAACTCCGGCGGA +
Preference number: 4 (lower is better)
Translates to: LALCRLKQVEALLLVPPFRRPCC*WRNSGG
Trigger: TCCGCCGGAGTTTCTCCACCAGCAACATGGCCGCCG...GAAGGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299853.10
ENST00000564209.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp TCCATCAGCTTCGAGGAATACGTGCTGGTCTCGTCGGCGCAGGCCCCGTCCACGGGTTCAGGGTGTCGATaGCCATCTCAAGCTCTACCT +
Preference number: 4 (lower is better)
Translates to: SISFEEYVLVSSAQAPSTGSGCR*PSQALP
Trigger: AGGTAGAGCTTGAGATGGCCATCGACACCCTGAACC...CGTGGACGGGGCCTGCGCCGACGAGACCAGCACGTATTCCTCGAAGCTGATGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561494.5
CDS-3UTR CCA 90 bp TCCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCTCGAGGAATACGTGCTaGTCTCGTCGGCGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: SSCSVSSEASRGPTSGSASRNTC*SRRRRP
Trigger: GGGCCTGCGCCGACGAGACCAGCACGTATTCCTCGA...GGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCTTCTCGAGGAATACGTGCTaGTCTCGTCGGCGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: LALCRLKQVEALLLVPPFSRNTC*SRRRRP
Trigger: GGGCCTGCGCCGACGAGACCAGCACGTATTCCTCGA...GAAGGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp TGTCCCTCAGGCCATAGTAATGCAGGTGGACCCAGGGCTCCTCTGCGTGCTTCTCCCTCTCCCGGTGCTTaGCGTCAGCCTTATCCAGGT +
Preference number: 4 (lower is better)
Translates to: CPSGHSNAGGPRAPLRASPSPGA*RQPYPG
Trigger: ACCTGGATAAGGCTGACGCCAAGCACCGGGAGAGGG...AGAAGCACGCAGAGGAGCCCTGGGTCCACCTGCATTACTATGGCCTGAGGGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564750.5
ENST00000565551.5
CDS-3UTR CCA 90 bp TGTCCACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTAGTCCCCTGCCTCGTTaGCCGCCTCCCTCTCCCGGT +
Preference number: 4 (lower is better)
Translates to: CPLHRAMPQVMRWSVPLASPLPR*PPPSPG
Trigger: ACCGGGAGAGGGAGGCGGCCAACGAGGCAGGGGACT...AGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGTGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp GAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGTTAGACTGCACACGGCGCTaGCGGGCCTGCTCTGACTCC +
Preference number: 4 (lower is better)
Translates to: EALLLVPPFFLGLRFAGLDCTRR*RACSDS
Trigger: GGAGTCAGAGCAGGCCCGCCAGCGCCGTGTGCAGTC...TAACCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp GTTCCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGGGCAGCGTGCGCAGCTaGGCCATCGACAGGACGTTG +
Preference number: 4 (lower is better)
Translates to: VPLALCRLKQVEALLLVPGSVRS*AIDRTL
Trigger: CAACGTCCTGTCGATGGCCCAGCTGCGCACGCTGCC...CGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAATGCCACAGGTCGCTACTTGGATCCGCTaGTCCCCACAGACCAGCCCG +
Preference number: 4 (lower is better)
Translates to: RLAEDNPFCPLHRAMPQVATWIR*SPQTSP
Trigger: CGGGCTGGTCTGTGGGGACCAGCGGATCCAAGTAGC...GACCTGTGGCATTGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp AAGCTGACCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCATGCTGTGGAGGCCGCTaGGGGAAGTGTCCATGGGCT +
Preference number: 4 (lower is better)
Translates to: KLTLRLAEDNPFCPLHRACCGGR*GKCPWA
Trigger: AGCCCATGGACACTTCCCCCAGCGGCCTCCACAGCA...TGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGGTCAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp AAGCTGACCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCATTGGCCAGCTTGCTGTaGAGGCCGCTGGGGGAAGTG +
Preference number: 4 (lower is better)
Translates to: KLTLRLAEDNPFCPLHRALASLL*RPLGEV
Trigger: CACTTCCCCCAGCGGCCTCCACAGCAAGCTGGCCAA...TGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGGTCAGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CTTAAGCTGACCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTCGAGAGGCAGCCCGTTaGCCAGCTTGCTGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: LKLTLRLAEDNPFCPLHRREAAR*PACCGG
Trigger: GCCTCCACAGCAAGCTGGCCAACGGGCTGCCTCTCG...ACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGGTCAGCTTAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp CAGGTGGACCCAGGGCTCCTCTGCGTGCTTCTTCTGCAGGAACTCATAGGACTGTTCCGCCTCATCCTGTaGAGAGTCCCCTGCCTCGTT +
Preference number: 4 (lower is better)
Translates to: QVDPGLLCVLLLQELIGLFRLIL*RVPCLV
Trigger: AACGAGGCAGGGGACTCTTCACAGGATGAGGCGGAA...CAGTCCTATGAGTTCCTGCAGAAGAAGCACGCAGAGGAGCCCTGGGTCCACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564750.5
ENST00000565551.5
CDS-3UTR TCA 90 bp TCCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCGGGCACAGCAGGTACTaGCGCTCATGCTCAGAGCGA +
Preference number: 4 (lower is better)
Translates to: SSCSVSSEASRGPTSGSAGHSRY*RSCSER
Trigger: TCGCTCTGAGCATGAGCGTCAGTACCTGCTGTGCCC...GGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp CGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTGGGCACAGCAGGTACTaGCGCTCATGCTCAGAGCGA +
Preference number: 4 (lower is better)
Translates to: RLKQVEALLLVPPFFLGLGHSRY*RSCSER
Trigger: TCGCTCTGAGCATGAGCGTCAGTACCTGCTGTGCCC...AAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp CGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAATGCCACAGGTCGGGCACAGCAGGTACTaGCGCTCATGCTCAGAGCGA +
Preference number: 4 (lower is better)
Translates to: RLAEDNPFCPLHRAMPQVGHSRY*RSCSER
Trigger: TCGCTCTGAGCATGAGCGTCAGTACCTGCTGTGCCC...GACCTGTGGCATTGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp CACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGTCGTGTTCTCCACCCCGCTTaGGCCGGGGCACAGCAGGTA +
Preference number: 4 (lower is better)
Translates to: HRAMPQVMRWSVPLALCRVLHPA*AGAQQV
Trigger: TACCTGCTGTGCCCCGGCTCAAGCGGGGTGGAGAAC...ACGACACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp ATCAGCATCATCAGGTACTCACTGGGTGACTTGACGAGCTCCGTGTTCTCCACCGTTCTCCACCCCGCTTaGGCCGGGGCACAGCAGGTA +
Preference number: 4 (lower is better)
Translates to: ISIIRYSLGDLTSSVFSTVLHPA*AGAQQV
Trigger: TACCTGCTGTGCCCCGGCTCAAGCGGGGTGGAGAAC...GGTGGAGAACACGGAGCTCGTCAAGTCACCCAGTGAGTACCTGATGATGCTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564750.5
ENST00000565551.5
CDS-3UTR TCA 90 bp AGGTACTCACTGGGTGACTTGACGAGCTCCGTGTTCTCCACCCCGCTTGAGCCGACTCACTGGGTGACTTaGCGAGCTCCGTGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: RYSLGDLTSSVFSTPLEPTHWVT*RAPCSP
Trigger: TGGAGAACACGGAGCTCGTCAAGTCACCCAGTGAGT...CGGCTCAAGCGGGGTGGAGAACACGGAGCTCGTCAAGTCACCCAGTGAGTACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564750.5
ENST00000565551.5
CDS-3UTR TCA 90 bp AGAGCGACTGTCCCTCAGGCCATAGTAATGCAGGTGGACCCAGGGCTCCTCTGCCAGGTACTCACTGGGTaGCTTGACGAGCTCCGTGTT +
Preference number: 4 (lower is better)
Translates to: RATVPQAIVMQVDPGLLCQVLTG*LDELRV
Trigger: AACACGGAGCTCGTCAAGTCACCCAGTGAGTACCTG...GCAGAGGAGCCCTGGGTCCACCTGCATTACTATGGCCTGAGGGACAGTCGCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564750.5
ENST00000565551.5
CDS-3UTR TCA 90 bp GCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGTTAGTATCACGGGCTCCTCCTTaGTCCGCACACCGGGCGGGA +
Preference number: 4 (lower is better)
Translates to: ALLLVPPFFLGLRFAGLVSRAPP*SAHRAG
Trigger: TCCCGCCCGGTGTGCGGATCAAGGAGGAGCCCGTGA...TACTAACCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp GCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGTTAGTAGGTCCGAGATGCCGCTaGAGAGTGTGTGGCCGGGGG +
Preference number: 4 (lower is better)
Translates to: ALLLVPPFFLGLRFAGLVGPRCR*RVCGRG
Trigger: CCCCCGGCCACACACTCTTCAGCGGCATCTCGGACC...TACTAACCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp AGGTACTCACTGGGTGACTTGACGAGCTCCGTGTTCTCCACCCCGCTTGAGCCGTTGCTCTGTGTCGTCTaGAGCAAGTCGAGGCCCTAC +
Preference number: 4 (lower is better)
Translates to: RYSLGDLTSSVFSTPLEPLLCVV*SKSRPY
Trigger: GTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAA...CGGCTCAAGCGGGGTGGAGAACACGGAGCTCGTCAAGTCACCCAGTGAGTACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564750.5
CDS-3UTR GCA 90 bp AGCTTCGAGGAATACGTGCTGGTCTCGTCGGCGCAGGCCCCGTCCACGTTCAGCAGCTCTACCTTCTGCTaGTTGGGCTTGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: SFEEYVLVSSAQAPSTFSSSTFC*LGLILA
Trigger: AGCCAAGATCAAGCCCAAGCAGCAGAAGGTAGAGCT...GCTGAACGTGGACGGGGCCTGCGCCGACGAGACCAGCACGTATTCCTCGAAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561494.5
CDS-3UTR GCA 90 bp GTCGAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGGCTTCGAGGAATACGTaGTGGTCTCGTCGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: VEALLLVPPFFLGLRFAGASRNT*WSRRRR
Trigger: CCTGCGCCGACGAGACCAGCACGTATTCCTCGAAGC...CCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTCGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAATGCCACAGGTCGCTTCGAGGAATACGTaGTGGTCTCGTCGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: RLAEDNPFCPLHRAMPQVASRNT*WSRRRR
Trigger: CCTGCGCCGACGAGACCAGCACGTATTCCTCGAAGC...GACCTGTGGCATTGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp AAGCTGACCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAGCTTCGAGGAATACGTaGTGGTCTCGTCGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: KLTLRLAEDNPFCPLHRAASRNT*WSRRRR
Trigger: CCTGCGCCGACGAGACCAGCACGTATTCCTCGAAGC...TGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGGTCAGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp GCTCCGTTCCCTCTAGATACACGTAACGCTGAGCCCAACAAGATCGCCTTCCTGGCCTCCCTCTCCCGGTaGTTGGCGTCAGCCTTATCC +
Preference number: 4 (lower is better)
Translates to: APFPLDTRNAEPNKIAFLASLSR*LASALS
Trigger: GGATAAGGCTGACGCCAAGCACCGGGAGAGGGAGGC...CAGGAAGGCGATCTTGTTGGGCTCAGCGTTACGTGTATCTAGAGGGAACGGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp GTTCCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGGCCTCCCTCTCCCGGTaGTTGGCGTCAGCCTTATCC +
Preference number: 4 (lower is better)
Translates to: VPLALCRLKQVEALLLVPASLSR*LASALS
Trigger: GGATAAGGCTGACGCCAAGCACCGGGAGAGGGAGGC...CGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp AGGTACTCACTGGGTGACTTGACGAGCTCCGTGTTCTCCACCCCGCTTGAGCCGCAGGGCTCCTCTGCGTaGTTCTTCTGCAGGAACTCA +
Preference number: 4 (lower is better)
Translates to: RYSLGDLTSSVFSTPLEPQGSSA*FFCRNS
Trigger: TGAGTTCCTGCAGAAGAAGCACGCAGAGGAGCCCTG...CGGCTCAAGCGGGGTGGAGAACACGGAGCTCGTCAAGTCACCCAGTGAGTACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564750.5
ENST00000565551.5
CDS-3UTR GCA 90 bp CGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTCCATCGACAGGACGTTaGTGGGGGCCACAGGCTTGT +
Preference number: 4 (lower is better)
Translates to: RLKQVEALLLVPPFFLGLPSTGR*WGPQAC
Trigger: ACAAGCCTGTGGCCCCCAGCAACGTCCTGTCGATGG...AAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp GTCGAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGCCATCGACAGGACGTTaGTGGGGGCCACAGGCTTGT +
Preference number: 4 (lower is better)
Translates to: VEALLLVPPFFLGLRFAGPSTGR*WGPQAC
Trigger: ACAAGCCTGTGGCCCCCAGCAACGTCCTGTCGATGG...CCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTCGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp AAGCTGACCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCACCATCGACAGGACGTTaGTGGGGGCCACAGGCTTGT +
Preference number: 4 (lower is better)
Translates to: KLTLRLAEDNPFCPLHRAPSTGR*WGPQAC
Trigger: ACAAGCCTGTGGCCCCCAGCAACGTCCTGTCGATGG...TGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGGTCAGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp GCTGGCCAAGTGCAGATTGAAGAGGCGCTTGAGTTCGCTCAGCGTGAGCACAAATCGCCACCTTCTGGATaGCCCGCAGAACAGCCACGG +
Preference number: 4 (lower is better)
Translates to: AGQVQIEEALEFAQREHKSPPSG*PAEQPR
Trigger: CCGTGGCTGTTCTGCGGGGCATCCAGAAGGTGGCGA...TTTGTGCTCACGCTGAGCGAACTCAAGCGCCTCTTCAATCTGCACTTGGCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564750.5
CDS-3UTR GCA 90 bp CCACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGCGAAGTCTCGGCCCCTaGAGAGCACCTCAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: PLHRAMPQVMRWSVPLALRSLGP*RAPQQA
Trigger: TGCCTGCTGAGGTGCTCTGCAGGGGCCGAGACTTCG...CAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp GCGACTGTCCCTCAGGCCATAGTAATGCAGGTGGACCCAGGGCTCCTCTGCGTGTGGACCACATCCGGGTaGTTCTTGATGAACTCCCCA +
Preference number: 4 (lower is better)
Translates to: ATVPQAIVMQVDPGLLCVWTTSG*FLMNSP
Trigger: TGGGGAGTTCATCAAGAAGCACCCGGATGTGGTCCA...CACGCAGAGGAGCCCTGGGTCCACCTGCATTACTATGGCCTGAGGGACAGTCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564750.5
CDS-3UTR GCA 90 bp GTTCCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGGTCCACAGCATGTGCTaGCGCTGGACCACATCCGGG +
Preference number: 4 (lower is better)
Translates to: VPLALCRLKQVEALLLVPVHSMC*RWTTSG
Trigger: CCCGGATGTGGTCCAGCGGCAGCACATGCTGTGGAC...CGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAATGCCACGGCAGGCTGGCCAAGTaGAGATTGAAGAGGCGCTTG +
Preference number: 4 (lower is better)
Translates to: PCDWLRIIPSVHCTVQCHGRLAK*RLKRRL
Trigger: CAAGCGCCTCTTCAATCTGCACTTGGCCAGCCTGCC...GTGGCATTGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp GGCGCAGGCCCCGTCCACGTTCAGCGCAATCTGCTCCCCTTTGCTGCGGCAATAACTGCTGCACACTTCTaGCTCTCCTGTGTTCCTTCA +
Preference number: 4 (lower is better)
Translates to: GAGPVHVQRNLLPFAAAITAAHF*LSCVPS
Trigger: TGAAGGAACACAGGAGAGGCAGAAGTGTGCAGCAGT...TATTGCCGCAGCAAAGGGGAGCAGATTGCGCTGAACGTGGACGGGGCCTGCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561494.5
CDS-3UTR CCA 90 bp TCCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCGGCCATGTTGCTGGTaGAGAAACTCCGGCGGACAC +
Preference number: 4 (lower is better)
Translates to: SSCSVSSEASRGPTSGSARPCCW*RNSGGH
Trigger: GTGTCCGCCGGAGTTTCTCCACCAGCAACATGGCCG...GGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299853.10
ENST00000564209.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp AAGCTGACCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCACGGCCATGTTGCTGGTaGAGAAACTCCGGCGGACAC +
Preference number: 4 (lower is better)
Translates to: KLTLRLAEDNPFCPLHRARPCCW*RNSGGH
Trigger: GTGTCCGCCGGAGTTTCTCCACCAGCAACATGGCCG...TGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGGTCAGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299853.10
ENST00000564209.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CTTAAGCTGACCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTCGGCGGCCATGTTGCTaGTGGAGAAACTCCGGCGGA +
Preference number: 4 (lower is better)
Translates to: LKLTLRLAEDNPFCPLHRRRPCC*WRNSGG
Trigger: TCCGCCGGAGTTTCTCCACCAGCAACATGGCCGCCG...ACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGGTCAGCTTAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299853.10
ENST00000564209.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp GCGACTGTCCCTCAGGCCATAGTAATGCAGGTGGACCCAGGGCTCCTCTGCGTGGTGTTACTGGTGGTCTaGGAAGAGCAGAAGGTCTGC +
Preference number: 4 (lower is better)
Translates to: ATVPQAIVMQVDPGLLCVVLLVV*EEQKVC
Trigger: GCAGACCTTCTGCTCTTCCCAGACCACCAGTAACAC...CACGCAGAGGAGCCCTGGGTCCACCTGCATTACTATGGCCTGAGGGACAGTCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564750.5
ENST00000565551.5
CDS-3UTR CCA 90 bp GTCGAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGCCCTCTCCCGGTGCTTaGCGTCAGCCTTATCCAGGT +
Preference number: 4 (lower is better)
Translates to: VEALLLVPPFFLGLRFAGPSPGA*RQPYPG
Trigger: ACCTGGATAAGGCTGACGCCAAGCACCGGGAGAGGG...CCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTCGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CCAGGGCTCCTCTGCGTGCTTCTTCTGCAGGAACTCATAGGACTGCACACGGCGTCTCCTCCTCCTGGCTaGGTGGCATCAGCATCATCA +
Preference number: 4 (lower is better)
Translates to: PGLLCVLLLQELIGLHTASPPPG*VASASS
Trigger: TGATGATGCTGATGCCACCCAGCCAGGAGGAGGAGA...CGCCGTGTGCAGTCCTATGAGTTCCTGCAGAAGAAGCACGCAGAGGAGCCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564750.5
ENST00000565551.5
CDS-3UTR CCA 90 bp CTCCGGCCGGGAGAACCGCACCGTGATCTGCTTAACATCGTCTTCCGCCTCATCTCTTTCTCCTCCTCCTaGCTGGGTGGCATCAGCATC +
Preference number: 4 (lower is better)
Translates to: LRPGEPHRDLLNIVFRLISFSSS*LGGISI
Trigger: GATGCTGATGCCACCCAGCCAGGAGGAGGAGAAAGA...GATGAGGCGGAAGACGATGTTAAGCAGATCACGGTGCGGTTCTCCCGGCCGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564750.5
ENST00000565551.5
CDS-3UTR CCA 90 bp CCATTAGCTCCGTTCCCTCTAGATACACGTAACGCTGAGCCCAACAAGATCGCCGGCAGCGTGCGCAGCTaGGCCATCGACAGGACGTTG +
Preference number: 4 (lower is better)
Translates to: PLAPFPLDTRNAEPNKIAGSVRS*AIDRTL
Trigger: CAACGTCCTGTCGATGGCCCAGCTGCGCACGCTGCC...GGCGATCTTGTTGGGCTCAGCGTTACGTGTATCTAGAGGGAACGGAGCTAATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGTCGTCTGGGCAGCGTGCGCAGCTaGGCCATCGACAGGACGTTG +
Preference number: 4 (lower is better)
Translates to: RAMPQVMRWSVPLALCRLGSVRS*AIDRTL
Trigger: CAACGTCCTGTCGATGGCCCAGCTGCGCACGCTGCC...CAGACGACACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CCGCTGGACCACATCCGGGTGCTTCTTGATGAACTCCCCATCATAAGGCAGAATGGCAGCGTGCGCAGCTaGGCCATCGACAGGACGTTG +
Preference number: 4 (lower is better)
Translates to: PLDHIRVLLDELPIIRQNGSVRS*AIDRTL
Trigger: CAACGTCCTGTCGATGGCCCAGCTGCGCACGCTGCC...ATTCTGCCTTATGATGGGGAGTTCATCAAGAAGCACCCGGATGTGGTCCAGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564750.5
CDS-3UTR CCA 90 bp CTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCTTCCGCCGCTGTGAGGGCTaGACGAGTCCTTGGGGTATA +
Preference number: 4 (lower is better)
Translates to: LALCRLKQVEALLLVPPFRRCEG*TSPWGI
Trigger: TATACCCCAAGGACTCGTCCAGCCCTCACAGCGGCG...GAAGGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CTGGGTGGCATCAGCATCATCAGGTACTCACTGGGTGACTTGACGAGCTCCGTGCGCCGCTGTGAGGGCTaGACGAGTCCTTGGGGTATA +
Preference number: 4 (lower is better)
Translates to: LGGISIIRYSLGDLTSSVRRCEG*TSPWGI
Trigger: TATACCCCAAGGACTCGTCCAGCCCTCACAGCGGCG...CACGGAGCTCGTCAAGTCACCCAGTGAGTACCTGATGATGCTGATGCCACCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564750.5
CDS-3UTR CCA 90 bp CGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGCATGTGCTGCCGCTaGACCACATCCGGGTGCTTC +
Preference number: 4 (lower is better)
Translates to: RLKQVEALLLVPPFFLGLSMCCR*TTSGCF
Trigger: GAAGCACCCGGATGTGGTCCAGCGGCAGCACATGCT...AAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAATGCCACAGGTCAGCATGTGCTGCCGCTaGACCACATCCGGGTGCTTC +
Preference number: 4 (lower is better)
Translates to: RLAEDNPFCPLHRAMPQVSMCCR*TTSGCF
Trigger: GAAGCACCCGGATGTGGTCCAGCGGCAGCACATGCT...GACCTGTGGCATTGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp AAGCTGACCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAAGCATGTGCTGCCGCTaGACCACATCCGGGTGCTTC +
Preference number: 4 (lower is better)
Translates to: KLTLRLAEDNPFCPLHRASMCCR*TTSGCF
Trigger: GAAGCACCCGGATGTGGTCCAGCGGCAGCACATGCT...TGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGGTCAGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCTTCAGCATGTGCTGCCGCTaGACCACATCCGGGTGCTTC +
Preference number: 4 (lower is better)
Translates to: LALCRLKQVEALLLVPPFSMCCR*TTSGCF
Trigger: GAAGCACCCGGATGTGGTCCAGCGGCAGCACATGCT...GAAGGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CCACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGGCTACTTGGATCCGCTaGTCCCCACAGACCAGCCCG +
Preference number: 4 (lower is better)
Translates to: PLHRAMPQVMRWSVPLALATWIR*SPQTSP
Trigger: CGGGCTGGTCTGTGGGGACCAGCGGATCCAAGTAGC...CAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CTTAAGCTGACCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCTACTTGGATCCGCTaGTCCCCACAGACCAGCCCG +
Preference number: 4 (lower is better)
Translates to: LKLTLRLAEDNPFCPLHRATWIR*SPQTSP
Trigger: CGGGCTGGTCTGTGGGGACCAGCGGATCCAAGTAGC...ACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGGTCAGCTTAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CCACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGCTGTGGAGGCCGCTaGGGGAAGTGTCCATGGGCT +
Preference number: 4 (lower is better)
Translates to: PLHRAMPQVMRWSVPLALCCGGR*GKCPWA
Trigger: AGCCCATGGACACTTCCCCCAGCGGCCTCCACAGCA...CAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp GTTCCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGTGCTGTGGAGGCCGCTaGGGGAAGTGTCCATGGGCT +
Preference number: 4 (lower is better)
Translates to: VPLALCRLKQVEALLLVPCCGGR*GKCPWA
Trigger: AGCCCATGGACACTTCCCCCAGCGGCCTCCACAGCA...CGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp GCTCCGTTCCCTCTAGATACACGTAACGCTGAGCCCAACAAGATCGCCTTCCTGTGCTGTGGAGGCCGCTaGGGGAAGTGTCCATGGGCT +
Preference number: 4 (lower is better)
Translates to: APFPLDTRNAEPNKIAFLCCGGR*GKCPWA
Trigger: AGCCCATGGACACTTCCCCCAGCGGCCTCCACAGCA...CAGGAAGGCGATCTTGTTGGGCTCAGCGTTACGTGTATCTAGAGGGAACGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp GTTCCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGTTGGCCAGCTTGCTGTaGAGGCCGCTGGGGGAAGTG +
Preference number: 4 (lower is better)
Translates to: VPLALCRLKQVEALLLVPLASLL*RPLGEV
Trigger: CACTTCCCCCAGCGGCCTCCACAGCAAGCTGGCCAA...CGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGGAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGTCGTCTGCGAGAGGCAGCCCGTTaGCCAGCTTGCTGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: RAMPQVMRWSVPLALCRLREAAR*PACCGG
Trigger: GCCTCCACAGCAAGCTGGCCAACGGGCTGCCTCTCG...CAGACGACACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp GAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGTTACGAGAGGCAGCCCGTTaGCCAGCTTGCTGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: EALLLVPPFFLGLRFAGLREAAR*PACCGG
Trigger: GCCTCCACAGCAAGCTGGCCAACGGGCTGCCTCTCG...TAACCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CAGCTTCGAGGAATACGTGCTGGTCTCGTCGGCGCAGGCCCCGTCCACGTTCAGACGGTCTCGCAGCTATaGTGTGATGGAGTTGGATCT +
Preference number: 4 (lower is better)
Translates to: QLRGIRAGLVGAGPVHVQTVSQL*CDGVGS
Trigger: AGATCCAACTCCATCACACCATAGCTGCGAGACCGT...CTGAACGTGGACGGGGCCTGCGCCGACGAGACCAGCACGTATTCCTCGAAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561494.5
CDS-3UTR CCA 90 bp TCTGCTCCCCTTTGCTGCGGCAATAGTTGGGGTTCAGGGTGTCGATGGCCATCTGTAGGTCATCGAGGCTaGACGCACAGGGTACCACGG +
Preference number: 4 (lower is better)
Translates to: SAPLCCGNSWGSGCRWPSVGHRG*THRVPR
Trigger: CCGTGGTACCCTGTGCGTCCAGCCTCGATGACCTAC...AGATGGCCATCGACACCCTGAACCCCAACTATTGCCGCAGCAAAGGGGAGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561494.5
CDS-3UTR TCA 90 bp CTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCTTCTCTGCTGCTTGGGCTTaGTCTTGGCTGAGAGGTGCG +
Preference number: 4 (lower is better)
Translates to: LALCRLKQVEALLLVPPFSAAWA*SWLRGA
Trigger: CGCACCTCTCAGCCAAGATCAAGCCCAAGCAGCAGA...GAAGGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp AAGCTGACCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCATCTGCTGCTTGGGCTTaGTCTTGGCTGAGAGGTGCG +
Preference number: 4 (lower is better)
Translates to: KLTLRLAEDNPFCPLHRASAAWA*SWLRGA
Trigger: CGCACCTCTCAGCCAAGATCAAGCCCAAGCAGCAGA...TGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGGTCAGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp TCCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCTTCCGCCTCATCCTGTaGAGAGTCCCCTGCCTCGTT +
Preference number: 4 (lower is better)
Translates to: SSCSVSSEASRGPTSGSAFRLIL*RVPCLV
Trigger: AACGAGGCAGGGGACTCTTCACAGGATGAGGCGGAA...GGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp CTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCTTCTTCCGCCTCATCCTGTaGAGAGTCCCCTGCCTCGTT +
Preference number: 4 (lower is better)
Translates to: LALCRLKQVEALLLVPPFFRLIL*RVPCLV
Trigger: AACGAGGCAGGGGACTCTTCACAGGATGAGGCGGAA...GAAGGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp CGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTTTCCGCCTCATCCTGTaGAGAGTCCCCTGCCTCGTT +
Preference number: 4 (lower is better)
Translates to: RLKQVEALLLVPPFFLGLFRLIL*RVPCLV
Trigger: AACGAGGCAGGGGACTCTTCACAGGATGAGGCGGAA...AAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp GTCGAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGTTCCGCCTCATCCTGTaGAGAGTCCCCTGCCTCGTT +
Preference number: 4 (lower is better)
Translates to: VEALLLVPPFFLGLRFAGFRLIL*RVPCLV
Trigger: AACGAGGCAGGGGACTCTTCACAGGATGAGGCGGAA...CCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTCGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp GCAGGTACTGACGCTCATGCTCAGAGCGACTGTCCCTCAGGCCATAGTAATGCAGGGCACAGCAGGTACTaGCGCTCATGCTCAGAGCGA +
Preference number: 4 (lower is better)
Translates to: AGTDAHAQSDCPSGHSNAGHSRY*RSCSER
Trigger: TCGCTCTGAGCATGAGCGTCAGTACCTGCTGTGCCC...TGCATTACTATGGCCTGAGGGACAGTCGCTCTGAGCATGAGCGTCAGTACCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564750.5
ENST00000565551.5
CDS-3UTR TCA 90 bp CGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAATGCCACAGGTCATCAGGATCTTGATCTaGTCGGCCAGGGGCAGCGTG +
Preference number: 4 (lower is better)
Translates to: RLAEDNPFCPLHRAMPQVIRILI*SARGSV
Trigger: CACGCTGCCCCTGGCCGATCAGATCAAGATCCTGAT...GACCTGTGGCATTGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp GTAACGCTGAGCCCAACAAGATCGCCTTCCTGTAACCATTTGAAGATAGCACCAGGGGCGGGTGCCCGTTaGAGCTGTCTGTGCCCGCAG +
Preference number: 4 (lower is better)
Translates to: VTLSPTRSPSCNHLKIAPGAGAR*SCLCPQ
Trigger: CTGCGGGCACAGACAGCTTCAACGGGCACCCGCCCC...TGGTGCTATCTTCAAATGGTTACAGGAAGGCGATCTTGTTGGGCTCAGCGTTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp ACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGAGGCGGCGGCCATGTTaGTGGTGGAGAAACTCCGGC +
Preference number: 4 (lower is better)
Translates to: TAPCNATGHEMVSSSCSVRRRPC*WWRNSG
Trigger: GCCGGAGTTTCTCCACCAGCAACATGGCCGCCGCCT...CACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299853.10
ENST00000564209.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp GAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGTTAAGGCGGCGGCCATGTTaGTGGTGGAGAAACTCCGGC +
Preference number: 4 (lower is better)
Translates to: EALLLVPPFFLGLRFAGLRRRPC*WWRNSG
Trigger: GCCGGAGTTTCTCCACCAGCAACATGGCCGCCGCCT...TAACCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299853.10
ENST00000564209.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CCATTAGCTCCGTTCCCTCTAGATACACGTAACGCTGAGCCCAACAAGATCGCCAGGCGGCGGCCATGTTaGTGGTGGAGAAACTCCGGC +
Preference number: 4 (lower is better)
Translates to: PLAPFPLDTRNAEPNKIARRRPC*WWRNSG
Trigger: GCCGGAGTTTCTCCACCAGCAACATGGCCGCCGCCT...GGCGATCTTGTTGGGCTCAGCGTTACGTGTATCTAGAGGGAACGGAGCTAATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CCACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGGCTTCGAGGAATACGTaGTGGTCTCGTCGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: PLHRAMPQVMRWSVPLALASRNT*WSRRRR
Trigger: CCTGCGCCGACGAGACCAGCACGTATTCCTCGAAGC...CAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGTGG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp GCTCCGTTCCCTCTAGATACACGTAACGCTGAGCCCAACAAGATCGCCTTCCTGGCTTCGAGGAATACGTaGTGGTCTCGTCGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: APFPLDTRNAEPNKIAFLASRNT*WSRRRR
Trigger: CCTGCGCCGACGAGACCAGCACGTATTCCTCGAAGC...CAGGAAGGCGATCTTGTTGGGCTCAGCGTTACGTGTATCTAGAGGGAACGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAATGCCACGCCGCAGCTGCAGGATaGCATGTAAAGGTGTCAGGT +
Preference number: 4 (lower is better)
Translates to: PCDWLRIIPSVHCTVQCHAAAAG*HVKVSG
Trigger: ACCTGACACCTTTACATGGCATCCTGCAGCTGCGGC...GTGGCATTGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCAAGCTGGGCCGCAGCTaGAGGATGCCATGTAAAGGT +
Preference number: 4 (lower is better)
Translates to: PLALCRLKQVEALLLVPPKLGRS*RMPCKG
Trigger: ACCTTTACATGGCATCCTGCAGCTGCGGCCCAGCTT...GGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp GGCCGGGAGAACCGCACCGTGATCTGCTTAACATCGTCTTCCGCCTCATCCTGTAAGCTGGGCCGCAGCTaGAGGATGCCATGTAAAGGT +
Preference number: 4 (lower is better)
Translates to: GRENRTVICLTSSSASSCKLGRS*RMPCKG
Trigger: ACCTTTACATGGCATCCTGCAGCTGCGGCCCAGCTT...ACAGGATGAGGCGGAAGACGATGTTAAGCAGATCACGGTGCGGTTCTCCCGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564750.5
CDS-3UTR GCA 90 bp CACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGTCGTTCGCCACCTTCTGGATaGCCCGCAGAACAGCCACGG +
Preference number: 4 (lower is better)
Translates to: HRAMPQVMRWSVPLALCRSPPSG*PAEQPR
Trigger: CCGTGGCTGTTCTGCGGGGCATCCAGAAGGTGGCGA...ACGACACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGTCGTCGAAGTCTCGGCCCCTaGAGAGCACCTCAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: HRAMPQVMRWSVPLALCRRSLGP*RAPQQA
Trigger: TGCCTGCTGAGGTGCTCTGCAGGGGCCGAGACTTCG...ACGACACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAATGCCACACCACCCAGCGGCTCTaGGTGAACTTCCACATAACG +
Preference number: 4 (lower is better)
Translates to: PCDWLRIIPSVHCTVQCHTTQRL*VNFHIT
Trigger: CGTTATGTGGAAGTTCACGCAGAGCCGCTGGGTGGT...GTGGCATTGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCCTCACCACGGCCATGTaGTCCAGGAAGTCCTTCACA +
Preference number: 4 (lower is better)
Translates to: PLALCRLKQVEALLLVPPLTTAM*SRKSFT
Trigger: TGTGAAGGACTTCCTGGAGCACATGGCCGTGGTGAG...GGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp GAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGTTACCCGTCCACAGCATGTaGTGCCGCTGGACCACATCC +
Preference number: 4 (lower is better)
Translates to: EALLLVPPFFLGLRFAGLPVHSM*CRWTTS
Trigger: GGATGTGGTCCAGCGGCAGCACATGCTGTGGACGGG...TAACCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAATGCCACAGGTCGGCAGGCTGGCCAAGTaGAGATTGAAGAGGCGCTTG +
Preference number: 4 (lower is better)
Translates to: RLAEDNPFCPLHRAMPQVGRLAK*RLKRRL
Trigger: CAAGCGCCTCTTCAATCTGCACTTGGCCAGCCTGCC...GACCTGTGGCATTGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGTCGTGCACCAGTATCTGCTTaGAACCGGCGGCCAGCACCG +
Preference number: 4 (lower is better)
Translates to: HRAMPQVMRWSVPLALCRAPVSA*NRRPAP
Trigger: CGGTGCTGGCCGCCGGTTGCAAGCAGATACTGGTGC...ACGACACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp TGTCCACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTGCACCAGTATCTGCTTaGAACCGGCGGCCAGCACCG +
Preference number: 4 (lower is better)
Translates to: CPLHRAMPQVMRWSVPLAAPVSA*NRRPAP
Trigger: CGGTGCTGGCCGCCGGTTGCAAGCAGATACTGGTGC...AGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGTGGACA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCTTCAAAGGCACCAGTATCTaGTTGCAACCGGCGGCCAGC +
Preference number: 4 (lower is better)
Translates to: LALCRLKQVEALLLVPPFKGTSI*LQPAAS
Trigger: GCTGGCCGCCGGTTGCAAGCAGATACTGGTGCCTTT...GAAGGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCCTGTCCACTGCACCGTaGAATGCCACAGGTCATGAG +
Preference number: 4 (lower is better)
Translates to: PLALCRLKQVEALLLVPPLSTAP*NATGHE
Trigger: CTCATGACCTGTGGCATTGCACGGTGCAGTGGACAG...GGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAATGCCACATCCCTTCTGTCCACTaGACCGTGCAATGCCACAGG +
Preference number: 4 (lower is better)
Translates to: PCDWLRIIPSVHCTVQCHIPSVH*TVQCHR
Trigger: CCTGTGGCATTGCACGGTGCAGTGGACAGAAGGGAT...GTGGCATTGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CCACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGCGGCCATGTTGCTGGTaGAGAAACTCCGGCGGACAC +
Preference number: 4 (lower is better)
Translates to: PLHRAMPQVMRWSVPLALRPCCW*RNSGGH
Trigger: GTGTCCGCCGGAGTTTCTCCACCAGCAACATGGCCG...CAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299853.10
ENST00000564209.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp ACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGCGGCGGCCATGTTGCTaGTGGAGAAACTCCGGCGGA +
Preference number: 4 (lower is better)
Translates to: TAPCNATGHEMVSSSCSVRRPCC*WRNSGG
Trigger: TCCGCCGGAGTTTCTCCACCAGCAACATGGCCGCCG...CACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299853.10
ENST00000564209.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp TGTCCACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCGGCGGCCATGTTGCTaGTGGAGAAACTCCGGCGGA +
Preference number: 4 (lower is better)
Translates to: CPLHRAMPQVMRWSVPLARRPCC*WRNSGG
Trigger: TCCGCCGGAGTTTCTCCACCAGCAACATGGCCGCCG...AGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGTGGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299853.10
ENST00000564209.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp ACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGTCGAGGAATACGTGCTaGTCTCGTCGGCGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: TAPCNATGHEMVSSSCSVSRNTC*SRRRRP
Trigger: GGGCCTGCGCCGACGAGACCAGCACGTATTCCTCGA...CACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CTCTGCGTGCTTCTTCTGCAGGAACTCATAGGACTGCACACGGCGCTGGCGGGCAACGGGATGTGTTACTaGTGGTCTGGGAAGAGCAGA +
Preference number: 4 (lower is better)
Translates to: LCVLLLQELIGLHTALAGNGMCY*WSGKSR
Trigger: TCTGCTCTTCCCAGACCACCAGTAACACATCCCGTT...GCCCGCCAGCGCCGTGTGCAGTCCTATGAGTTCCTGCAGAAGAAGCACGCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564750.5
ENST00000565551.5
CDS-3UTR CCA 90 bp CTTAAGCTGACCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTCCCTCTCCCGGTGCTTaGCGTCAGCCTTATCCAGGT +
Preference number: 4 (lower is better)
Translates to: LKLTLRLAEDNPFCPLHRPSPGA*RQPYPG
Trigger: ACCTGGATAAGGCTGACGCCAAGCACCGGGAGAGGG...ACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGGTCAGCTTAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp GCTCCGTTCCCTCTAGATACACGTAACGCTGAGCCCAACAAGATCGCCTTCCTGCCCTCTCCCGGTGCTTaGCGTCAGCCTTATCCAGGT +
Preference number: 4 (lower is better)
Translates to: APFPLDTRNAEPNKIAFLPSPGA*RQPYPG
Trigger: ACCTGGATAAGGCTGACGCCAAGCACCGGGAGAGGG...CAGGAAGGCGATCTTGTTGGGCTCAGCGTTACGTGTATCTAGAGGGAACGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CGGGTGCTTCTTGATGAACTCCCCATCATAAGGCAGAATGAACTCCCAGCCTTTGACTGCACACGGCGCTaGCGGGCCTGCTCTGACTCC +
Preference number: 4 (lower is better)
Translates to: RVLLDELPIIRQNELPAFDCTRR*RACSDS
Trigger: GGAGTCAGAGCAGGCCCGCCAGCGCCGTGTGCAGTC...AAAGGCTGGGAGTTCATTCTGCCTTATGATGGGGAGTTCATCAAGAAGCACCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564750.5
CDS-3UTR CCA 90 bp TGCGTGAACTTCCACATAACGAAGTCTCGGCCCCTGCAGAGCACCTCAGCAGGCCTCCTCCTGGCTGGGTaGCATCAGCATCATCAGGTA +
Preference number: 4 (lower is better)
Translates to: CVNFHITKSRPLQSTSAGLLLAG*HQHHQV
Trigger: TACCTGATGATGCTGATGCCACCCAGCCAGGAGGAG...GCCTGCTGAGGTGCTCTGCAGGGGCCGAGACTTCGTTATGTGGAAGTTCACGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564750.5
CDS-3UTR CCA 90 bp CCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAATGCCACTCTCCTCCTCCTGGCTaGGTGGCATCAGCATCATCA +
Preference number: 4 (lower is better)
Translates to: PCDWLRIIPSVHCTVQCHSPPPG*VASASS
Trigger: TGATGATGCTGATGCCACCCAGCCAGGAGGAGGAGA...GTGGCATTGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp GCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGTTAGTAGGCAGCGTGCGCAGCTaGGCCATCGACAGGACGTTG +
Preference number: 4 (lower is better)
Translates to: ALLLVPPFFLGLRFAGLVGSVRS*AIDRTL
Trigger: CAACGTCCTGTCGATGGCCCAGCTGCGCACGCTGCC...TACTAACCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp GTCGAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGAACATCGCCACCTTCTaGATGCCCCGCAGAACAGCC +
Preference number: 4 (lower is better)
Translates to: VEALLLVPPFFLGLRFAGNIATF*MPRRTA
Trigger: GGCTGTTCTGCGGGGCATCCAGAAGGTGGCGATGTT...CCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTCGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAACATCGCCACCTTCTaGATGCCCCGCAGAACAGCC +
Preference number: 4 (lower is better)
Translates to: RLKQVEALLLVPPFFLGLNIATF*MPRRTA
Trigger: GGCTGTTCTGCGGGGCATCCAGAAGGTGGCGATGTT...AAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAATGCCACAGGTCAACATCGCCACCTTCTaGATGCCCCGCAGAACAGCC +
Preference number: 4 (lower is better)
Translates to: RLAEDNPFCPLHRAMPQVNIATF*MPRRTA
Trigger: GGCTGTTCTGCGGGGCATCCAGAAGGTGGCGATGTT...GACCTGTGGCATTGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp GTTCCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCGCCGCTGTGAGGGCTaGACGAGTCCTTGGGGTATA +
Preference number: 4 (lower is better)
Translates to: VPLALCRLKQVEALLLVPRRCEG*TSPWGI
Trigger: TATACCCCAAGGACTCGTCCAGCCCTCACAGCGGCG...CGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CCACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGCGCCGCTGTGAGGGCTaGACGAGTCCTTGGGGTATA +
Preference number: 4 (lower is better)
Translates to: PLHRAMPQVMRWSVPLALRRCEG*TSPWGI
Trigger: TATACCCCAAGGACTCGTCCAGCCCTCACAGCGGCG...CAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCTTCCCTCGGCGCAGAGTTTaGTCACGGTTGCCACCTCTT +
Preference number: 4 (lower is better)
Translates to: LALCRLKQVEALLLVPPFPRRRV*SRLPPL
Trigger: AAGAGGTGGCAACCGTGACCAAACTCTGCGCCGAGG...GAAGGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp GGTACTGACGCTCATGCTCAGAGCGACTGTCCCTCAGGCCATAGTAATGCAGGTAGCATGTGCTGCCGCTaGACCACATCCGGGTGCTTC +
Preference number: 4 (lower is better)
Translates to: GTDAHAQSDCPSGHSNAGSMCCR*TTSGCF
Trigger: GAAGCACCCGGATGTGGTCCAGCGGCAGCACATGCT...ACCTGCATTACTATGGCCTGAGGGACAGTCGCTCTGAGCATGAGCGTCAGTACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564750.5
CDS-3UTR CCA 90 bp TGTCCACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTGCTACTTGGATCCGCTaGTCCCCACAGACCAGCCCG +
Preference number: 4 (lower is better)
Translates to: CPLHRAMPQVMRWSVPLAATWIR*SPQTSP
Trigger: CGGGCTGGTCTGTGGGGACCAGCGGATCCAAGTAGC...AGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGTGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCGCTGGGCCTTGGTTTTaGCTACTTGGATCCGCTGGT +
Preference number: 4 (lower is better)
Translates to: PLALCRLKQVEALLLVPPAGPWF*LLGSAG
Trigger: ACCAGCGGATCCAAGTAGCCAAAACCAAGGCCCAGC...GGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CTCCGGCCGGGAGAACCGCACCGTGATCTGCTTAACATCGTCTTCCGCCTCATCAACGCGTGGTTCTGCTaGGCCTTGGTTTTGGCTACT +
Preference number: 4 (lower is better)
Translates to: LRPGEPHRDLLNIVFRLINAWFC*ALVLAT
Trigger: AGTAGCCAAAACCAAGGCCCAGCAGAACCACGCGTT...GATGAGGCGGAAGACGATGTTAAGCAGATCACGGTGCGGTTCTCCCGGCCGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564750.5
CDS-3UTR CCA 90 bp CGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGTCGTCTGTTGGCCAGCTTGCTGTaGAGGCCGCTGGGGGAAGTG +
Preference number: 4 (lower is better)
Translates to: RAMPQVMRWSVPLALCRLLASLL*RPLGEV
Trigger: CACTTCCCCCAGCGGCCTCCACAGCAAGCTGGCCAA...CAGACGACACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp ACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGTTGGCCAGCTTGCTGTaGAGGCCGCTGGGGGAAGTG +
Preference number: 4 (lower is better)
Translates to: TAPCNATGHEMVSSSCSVLASLL*RPLGEV
Trigger: CACTTCCCCCAGCGGCCTCCACAGCAAGCTGGCCAA...CACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CCATTAGCTCCGTTCCCTCTAGATACACGTAACGCTGAGCCCAACAAGATCGCCTTGGCCAGCTTGCTGTaGAGGCCGCTGGGGGAAGTG +
Preference number: 4 (lower is better)
Translates to: PLAPFPLDTRNAEPNKIALASLL*RPLGEV
Trigger: CACTTCCCCCAGCGGCCTCCACAGCAAGCTGGCCAA...GGCGATCTTGTTGGGCTCAGCGTTACGTGTATCTAGAGGGAACGGAGCTAATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp GTAACGCTGAGCCCAACAAGATCGCCTTCCTGTAACCATTTGAAGATAGCACCAGTGCTGGCGCAGCCCTaGGGCGGGTGCCCGTTGAAG +
Preference number: 4 (lower is better)
Translates to: VTLSPTRSPSCNHLKIAPVLAQP*GGCPLK
Trigger: CTTCAACGGGCACCCGCCCCAGGGCTGCGCCAGCAC...TGGTGCTATCTTCAAATGGTTACAGGAAGGCGATCTTGTTGGGCTCAGCGTTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp TGGATACCCGTCCACAGCATGTGCTGCCGCTGGACCACATCCGGGTGCTTCTTGACTGTCTCTGAAAGGTaGCCTCCACGAAGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: WIPVHSMCCRWTTSGCFLTVSER*PPRRPS
Trigger: TGAAGGCCTTCGTGGAGGCCACCTTTCAGAGACAGT...CAAGAAGCACCCGGATGTGGTCCAGCGGCAGCACATGCTGTGGACGGGTATCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564750.5
CDS-3UTR CCA 90 bp CAGGTGGACCCAGGGCTCCTCTGCGTGCTTCTTCTGCAGGAACTCATAGGACTGTCGAGGCCCTACTTCTaGTTCCGCCCTTCTTCCTTG +
Preference number: 4 (lower is better)
Translates to: QVDPGLLCVLLLQELIGLSRPYF*FRPSSL
Trigger: CAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTCGA...CAGTCCTATGAGTTCCTGCAGAAGAAGCACGCAGAGGAGCCCTGGGTCCACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564750.5
CDS-3UTR TCA 90 bp GTTCCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGTTCCGCCTCATCCTGTaGAGAGTCCCCTGCCTCGTT +
Preference number: 4 (lower is better)
Translates to: VPLALCRLKQVEALLLVPFRLIL*RVPCLV
Trigger: AACGAGGCAGGGGACTCTTCACAGGATGAGGCGGAA...CGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp TGTCCACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTGGGCACAGCAGGTACTaGCGCTCATGCTCAGAGCGA +
Preference number: 4 (lower is better)
Translates to: CPLHRAMPQVMRWSVPLAGHSRY*RSCSER
Trigger: TCGCTCTGAGCATGAGCGTCAGTACCTGCTGTGCCC...AGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGTGGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp CGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAATGCCACAGGTCACTCACTGGGTGACTTaGCGAGCTCCGTGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: RLAEDNPFCPLHRAMPQVTHWVT*RAPCSP
Trigger: TGGAGAACACGGAGCTCGTCAAGTCACCCAGTGAGT...GACCTGTGGCATTGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp CGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTACTCACTGGGTGACTTaGCGAGCTCCGTGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: RLKQVEALLLVPPFFLGLTHWVT*RAPCSP
Trigger: TGGAGAACACGGAGCTCGTCAAGTCACCCAGTGAGT...AAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp GTCGAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGCAGGTACTCACTGGGTaGCTTGACGAGCTCCGTGTT +
Preference number: 4 (lower is better)
Translates to: VEALLLVPPFFLGLRFAGQVLTG*LDELRV
Trigger: AACACGGAGCTCGTCAAGTCACCCAGTGAGTACCTG...CCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTCGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp CGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAATGCCACAGGTCCAGGTACTCACTGGGTaGCTTGACGAGCTCCGTGTT +
Preference number: 4 (lower is better)
Translates to: RLAEDNPFCPLHRAMPQVQVLTG*LDELRV
Trigger: AACACGGAGCTCGTCAAGTCACCCAGTGAGTACCTG...GACCTGTGGCATTGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp TCCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCAGGTACTCACTGGGTaGCTTGACGAGCTCCGTGTT +
Preference number: 4 (lower is better)
Translates to: SSCSVSSEASRGPTSGSAQVLTG*LDELRV
Trigger: AACACGGAGCTCGTCAAGTCACCCAGTGAGTACCTG...GGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp CCACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGATCAGGATCTTGATCTaGTCGGCCAGGGGCAGCGTG +
Preference number: 4 (lower is better)
Translates to: PLHRAMPQVMRWSVPLALIRILI*SARGSV
Trigger: CACGCTGCCCCTGGCCGATCAGATCAAGATCCTGAT...CAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp CCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAATGCCACTCTTCATCAGGATCTTaGTCTGATCGGCCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: PCDWLRIIPSVHCTVQCHSSSGS*SDRPGA
Trigger: TGCCCCTGGCCGATCAGATCAAGATCCTGATGAAGA...GTGGCATTGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp CGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAATGCCACAGGTCACTCCCAGCCTTTGTTaGTCCTCACCACGGCCATGT +
Preference number: 4 (lower is better)
Translates to: RLAEDNPFCPLHRAMPQVTPSLC*SSPRPC
Trigger: ACATGGCCGTGGTGAGGATCAACAAAGGCTGGGAGT...GACCTGTGGCATTGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp GTCGAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGACTCCCAGCCTTTGTTaGTCCTCACCACGGCCATGT +
Preference number: 4 (lower is better)
Translates to: VEALLLVPPFFLGLRFAGTPSLC*SSPRPC
Trigger: ACATGGCCGTGGTGAGGATCAACAAAGGCTGGGAGT...CCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTCGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp CCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAATGCCACAGCACAAACTGTCTCTaGAAGGTGGCCTCCACGAAG +
Preference number: 4 (lower is better)
Translates to: PCDWLRIIPSVHCTVQCHSTNCL*KVASTK
Trigger: CTTCGTGGAGGCCACCTTTCAGAGACAGTTTGTGCT...GTGGCATTGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp GTCGAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGACGTTCAGCGCAATCTaGTCCCCTTTGCTGCGGCAA +
Preference number: 4 (lower is better)
Translates to: VEALLLVPPFFLGLRFAGTFSAI*SPLLRQ
Trigger: TTGCCGCAGCAAAGGGGAGCAGATTGCGCTGAACGT...CCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTCGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp TCTGCTCCCCTTTGCTGCGGCAATAGTTGGGGTTCAGGGTGTCGATGGCCATCTACGTTCAGCGCAATCTaGTCCCCTTTGCTGCGGCAA +
Preference number: 4 (lower is better)
Translates to: SAPLCCGNSWGSGCRWPSTFSAI*SPLLRQ
Trigger: TTGCCGCAGCAAAGGGGAGCAGATTGCGCTGAACGT...AGATGGCCATCGACACCCTGAACCCCAACTATTGCCGCAGCAAAGGGGAGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000561494.5
CDS-3UTR GCA 90 bp TCCTCCTCCTGGCTGGGTGGCATCAGCATCATCAGGTACTCACTGGGTGACTTGACGTTCAGCGCAATCTaGTCCCCTTTGCTGCGGCAA +
Preference number: 4 (lower is better)
Translates to: SSSWLGGISIIRYSLGDLTFSAI*SPLLRQ
Trigger: TTGCCGCAGCAAAGGGGAGCAGATTGCGCTGAACGT...CAAGTCACCCAGTGAGTACCTGATGATGCTGATGCCACCCAGCCAGGAGGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565551.5
CDS-3UTR GCA 90 bp TGGGAAGAGCAGAAGGTCTGCTTGTCCATCAGCTTCGAGGAATACGTGCTGGTCGCTTCGAGGAATACGTaGTGGTCTCGTCGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: WEEQKVCLSISFEEYVLVASRNT*WSRRRR
Trigger: CCTGCGCCGACGAGACCAGCACGTATTCCTCGAAGC...GACCAGCACGTATTCCTCGAAGCTGATGGACAAGCAGACCTTCTGCTCTTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561494.5
CDS-3UTR GCA 90 bp CTTGAGTTCGCTCAGCGTGAGCACAAACTGTCTCTGAAAGGTGGCCTCCACGAAGCTTCGAGGAATACGTaGTGGTCTCGTCGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: LEFAQREHKLSLKGGLHEASRNT*WSRRRR
Trigger: CCTGCGCCGACGAGACCAGCACGTATTCCTCGAAGC...TTCGTGGAGGCCACCTTTCAGAGACAGTTTGTGCTCACGCTGAGCGAACTCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564750.5
CDS-3UTR GCA 90 bp CACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGTCGTGCTTCGAGGAATACGTaGTGGTCTCGTCGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: HRAMPQVMRWSVPLALCRASRNT*WSRRRR
Trigger: CCTGCGCCGACGAGACCAGCACGTATTCCTCGAAGC...ACGACACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp GCGGAATGTCATCGTAGGTCATCGAGGCTGGACGCACAGGGTACCACGGTCTCGGAAGAGCAGAAGGTCTaGTTGTCCATCAGCTTCGAG +
Preference number: 4 (lower is better)
Translates to: AECHRRSSRLDAQGTTVSEEQKV*LSISFE
Trigger: CTCGAAGCTGATGGACAAGCAGACCTTCTGCTCTTC...CGAGACCGTGGTACCCTGTGCGTCCAGCCTCGATGACCTACGATGACATTCCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561494.5
CDS-3UTR GCA 90 bp AAGCTGACCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAGCCGCAGCTGCAGGATaGCATGTAAAGGTGTCAGGT +
Preference number: 4 (lower is better)
Translates to: KLTLRLAEDNPFCPLHRAAAAAG*HVKVSG
Trigger: ACCTGACACCTTTACATGGCATCCTGCAGCTGCGGC...TGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGGTCAGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp TCCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCAAGCTGGGCCGCAGCTaGAGGATGCCATGTAAAGGT +
Preference number: 4 (lower is better)
Translates to: SSCSVSSEASRGPTSGSAKLGRS*RMPCKG
Trigger: ACCTTTACATGGCATCCTGCAGCTGCGGCCCAGCTT...GGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCTTCAAGCTGGGCCGCAGCTaGAGGATGCCATGTAAAGGT +
Preference number: 4 (lower is better)
Translates to: LALCRLKQVEALLLVPPFKLGRS*RMPCKG
Trigger: ACCTTTACATGGCATCCTGCAGCTGCGGCCCAGCTT...GAAGGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAATGCCACAGGTCAAGCTGGGCCGCAGCTaGAGGATGCCATGTAAAGGT +
Preference number: 4 (lower is better)
Translates to: RLAEDNPFCPLHRAMPQVKLGRS*RMPCKG
Trigger: ACCTTTACATGGCATCCTGCAGCTGCGGCCCAGCTT...GACCTGTGGCATTGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp GCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGTTAGTAGCCTCCCTCTCCCGGTaGTTGGCGTCAGCCTTATCC +
Preference number: 4 (lower is better)
Translates to: ALLLVPPFFLGLRFAGLVASLSR*LASALS
Trigger: GGATAAGGCTGACGCCAAGCACCGGGAGAGGGAGGC...TACTAACCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAATGCCACAGGTCCAGGGCTCCTCTGCGTaGTTCTTCTGCAGGAACTCA +
Preference number: 4 (lower is better)
Translates to: RLAEDNPFCPLHRAMPQVQGSSA*FFCRNS
Trigger: TGAGTTCCTGCAGAAGAAGCACGCAGAGGAGCCCTG...GACCTGTGGCATTGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCTTCCAGGGCTCCTCTGCGTaGTTCTTCTGCAGGAACTCA +
Preference number: 4 (lower is better)
Translates to: LALCRLKQVEALLLVPPFQGSSA*FFCRNS
Trigger: TGAGTTCCTGCAGAAGAAGCACGCAGAGGAGCCCTG...GAAGGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp TCCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCAGGGCTCCTCTGCGTaGTTCTTCTGCAGGAACTCA +
Preference number: 4 (lower is better)
Translates to: SSCSVSSEASRGPTSGSAQGSSA*FFCRNS
Trigger: TGAGTTCCTGCAGAAGAAGCACGCAGAGGAGCCCTG...GGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp TGTCCACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCCATCGACAGGACGTTaGTGGGGGCCACAGGCTTGT +
Preference number: 4 (lower is better)
Translates to: CPLHRAMPQVMRWSVPLAPSTGR*WGPQAC
Trigger: ACAAGCCTGTGGCCCCCAGCAACGTCCTGTCGATGG...AGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGTGGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp GTCGAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGACCACCCAGCGGCTCTaGGTGAACTTCCACATAACG +
Preference number: 4 (lower is better)
Translates to: VEALLLVPPFFLGLRFAGTTQRL*VNFHIT
Trigger: CGTTATGTGGAAGTTCACGCAGAGCCGCTGGGTGGT...CCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTCGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCTTCACCACCCAGCGGCTCTaGGTGAACTTCCACATAACG +
Preference number: 4 (lower is better)
Translates to: LALCRLKQVEALLLVPPFTTQRL*VNFHIT
Trigger: CGTTATGTGGAAGTTCACGCAGAGCCGCTGGGTGGT...GAAGGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAATGCCACAGGTCCTCACCACGGCCATGTaGTCCAGGAAGTCCTTCACA +
Preference number: 4 (lower is better)
Translates to: RLAEDNPFCPLHRAMPQVLTTAM*SRKSFT
Trigger: TGTGAAGGACTTCCTGGAGCACATGGCCGTGGTGAG...GACCTGTGGCATTGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CAAAATTATGTACGTGACTCGCCTCTTTCTAGTGGACAGTGCTGCTCTGTCTTCGCCCGTTGGCCAGCTTaGTGTGGAGGCCGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: QNYVRDSPLSSGQCCSVFARWPA*CGGRWG
Trigger: CCCCCAGCGGCCTCCACAGCAAGCTGGCCAACGGGC...GAAGACAGAGCAGCACTGTCCACTAGAAAGAGGCGAGTCACGTACATAATTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CAAATTGTACTGCAAAGAAGGTCCCAGCTGGTCTCTTCTGGGAGTGATCTAACTGCCCGTTGGCCAGCTTaGTGTGGAGGCCGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: QIVLQRRSQLVSSGSDLTARWPA*CGGRWG
Trigger: CCCCCAGCGGCCTCCACAGCAAGCTGGCCAACGGGC...AGTTAGATCACTCCCAGAAGAGACCAGCTGGGACCTTCTTTGCAGTACAATTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CTTAAGCTGACCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGGCAGGCTGGCCAAGTaGAGATTGAAGAGGCGCTTG +
Preference number: 4 (lower is better)
Translates to: LKLTLRLAEDNPFCPLHRGRLAK*RLKRRL
Trigger: CAAGCGCCTCTTCAATCTGCACTTGGCCAGCCTGCC...ACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGGTCAGCTTAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp GCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGTTAGTAGCACCAGTATCTGCTTaGAACCGGCGGCCAGCACCG +
Preference number: 4 (lower is better)
Translates to: ALLLVPPFFLGLRFAGLVAPVSA*NRRPAP
Trigger: CGGTGCTGGCCGCCGGTTGCAAGCAGATACTGGTGC...TACTAACCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CCACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGAAAGGCACCAGTATCTaGTTGCAACCGGCGGCCAGC +
Preference number: 4 (lower is better)
Translates to: PLHRAMPQVMRWSVPLALKGTSI*LQPAAS
Trigger: GCTGGCCGCCGGTTGCAAGCAGATACTGGTGCCTTT...CAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp GCTGCAGGATGCCATGTAAAGGTGTCAGGTGGAGCTCACCTTGCCTGTAGAGTGAAAGGCACCAGTATCTaGTTGCAACCGGCGGCCAGC +
Preference number: 4 (lower is better)
Translates to: AAGCHVKVSGGAHLACRVKGTSI*LQPAAS
Trigger: GCTGGCCGCCGGTTGCAAGCAGATACTGGTGCCTTT...CACTCTACAGGCAAGGTGAGCTCCACCTGACACCTTTACATGGCATCCTGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564750.5
CDS-3UTR GCA 90 bp CTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCTTCAGGGCAAACACCTTCTaGTCATCCGGGGAAGCAGCA +
Preference number: 4 (lower is better)
Translates to: LALCRLKQVEALLLVPPFRANTF*SSGEAA
Trigger: TGCTGCTTCCCCGGATGAGCAGAAGGTGTTTGCCCT...GAAGGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp GAGGCGCTTGAGTTCGCTCAGCGTGAGCACAAACTGTCTCTGAAAGGTGGCCTCAGGGCAAACACCTTCTaGTCATCCGGGGAAGCAGCA +
Preference number: 4 (lower is better)
Translates to: EALEFAQREHKLSLKGGLRANTF*SSGEAA
Trigger: TGCTGCTTCCCCGGATGAGCAGAAGGTGTTTGCCCT...GAGGCCACCTTTCAGAGACAGTTTGTGCTCACGCTGAGCGAACTCAAGCGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564750.5
CDS-3UTR GCA 90 bp CGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTCTGTCCACTGCACCGTaGAATGCCACAGGTCATGAG +
Preference number: 4 (lower is better)
Translates to: RLKQVEALLLVPPFFLGLLSTAP*NATGHE
Trigger: CTCATGACCTGTGGCATTGCACGGTGCAGTGGACAG...AAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp GTCGAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGCTGTCCACTGCACCGTaGAATGCCACAGGTCATGAG +
Preference number: 4 (lower is better)
Translates to: VEALLLVPPFFLGLRFAGLSTAP*NATGHE
Trigger: CTCATGACCTGTGGCATTGCACGGTGCAGTGGACAG...CCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTCGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp AAGCTGACCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAATCCCTTCTGTCCACTaGACCGTGCAATGCCACAGG +
Preference number: 4 (lower is better)
Translates to: KLTLRLAEDNPFCPLHRAIPSVH*TVQCHR
Trigger: CCTGTGGCATTGCACGGTGCAGTGGACAGAAGGGAT...TGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGGTCAGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp GTGAACTTCCACATAACGAAGTCTCGGCCCCTGCAGAGCACCTCAGCAGGCACGCCCCTTTGCTTCTGCTaGTTGGGCTTGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: VNFHITKSRPLQSTSAGTPLCFC*LGLILA
Trigger: AGCCAAGATCAAGCCCAAGCAGCAGAAGCAAAGGGG...CGTGCCTGCTGAGGTGCTCTGCAGGGGCCGAGACTTCGTTATGTGGAAGTTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564750.5
CDS-3UTR CCA 90 bp CACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGTCGTCGGCCATGTTGCTGGTaGAGAAACTCCGGCGGACAC +
Preference number: 4 (lower is better)
Translates to: HRAMPQVMRWSVPLALCRRPCCW*RNSGGH
Trigger: GTGTCCGCCGGAGTTTCTCCACCAGCAACATGGCCG...ACGACACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299853.10
ENST00000564209.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CTCTGCGTGCTTCTTCTGCAGGAACTCATAGGACTGCACACGGCGCTGGCGGGCGATCTCCTGTACAACTaGGTCATCCTCTTCATTGGC +
Preference number: 4 (lower is better)
Translates to: LCVLLLQELIGLHTALAGDLLYN*VILFIG
Trigger: GCCAATGAAGAGGATGACCCAGTTGTACAGGAGATC...GCCCGCCAGCGCCGTGTGCAGTCCTATGAGTTCCTGCAGAAGAAGCACGCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564750.5
CDS-3UTR CCA 90 bp CCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCGTAGGTCATCGAGGCTaGACGCACAGGGTACTGAAA +
Preference number: 4 (lower is better)
Translates to: PLALCRLKQVEALLLVPPVGHRG*THRVLK
Trigger: TTTCAGTACCCTGTGCGTCCAGCCTCGATGACCTAC...GGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp TCCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCTGCTGCGGCAATAGTTaGGGTTCAGGGTGTCGATGG +
Preference number: 4 (lower is better)
Translates to: SSCSVSSEASRGPTSGSACCGNS*GSGCRW
Trigger: CCATCGACACCCTGAACCCCAACTATTGCCGCAGCA...GGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCGGGATGTGTTACTGGTaGTCTGGGAAGAGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: PLALCRLKQVEALLLVPPGMCYW*SGKSRR
Trigger: CCTTCTGCTCTTCCCAGACCACCAGTAACACATCCC...GGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAATGCCACGGGATGTGTTACTGGTaGTCTGGGAAGAGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: PCDWLRIIPSVHCTVQCHGMCYW*SGKSRR
Trigger: CCTTCTGCTCTTCCCAGACCACCAGTAACACATCCC...GTGGCATTGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp GAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGTTACCCTCTCCCGGTGCTTaGCGTCAGCCTTATCCAGGT +
Preference number: 4 (lower is better)
Translates to: EALLLVPPFFLGLRFAGLPSPGA*RQPYPG
Trigger: ACCTGGATAAGGCTGACGCCAAGCACCGGGAGAGGG...TAACCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp TGTCCACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCCCTCTCCCGGTGCTTaGCGTCAGCCTTATCCAGGT +
Preference number: 4 (lower is better)
Translates to: CPLHRAMPQVMRWSVPLAPSPGA*RQPYPG
Trigger: ACCTGGATAAGGCTGACGCCAAGCACCGGGAGAGGG...AGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGTGGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp ACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGCCCTCTCCCGGTGCTTaGCGTCAGCCTTATCCAGGT +
Preference number: 4 (lower is better)
Translates to: TAPCNATGHEMVSSSCSVPSPGA*RQPYPG
Trigger: ACCTGGATAAGGCTGACGCCAAGCACCGGGAGAGGG...CACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAATGCCACAGGTCCTCCTCCTGGCTGGGTaGCATCAGCATCATCAGGTA +
Preference number: 4 (lower is better)
Translates to: RLAEDNPFCPLHRAMPQVLLLAG*HQHHQV
Trigger: TACCTGATGATGCTGATGCCACCCAGCCAGGAGGAG...GACCTGTGGCATTGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTTCTCCTCCTCCTGGCTaGGTGGCATCAGCATCATCA +
Preference number: 4 (lower is better)
Translates to: RLKQVEALLLVPPFFLGLSPPPG*VASASS
Trigger: TGATGATGCTGATGCCACCCAGCCAGGAGGAGGAGA...AAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp AAGCTGACCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCATCTCCTCCTCCTGGCTaGGTGGCATCAGCATCATCA +
Preference number: 4 (lower is better)
Translates to: KLTLRLAEDNPFCPLHRASPPPG*VASASS
Trigger: TGATGATGCTGATGCCACCCAGCCAGGAGGAGGAGA...TGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGGTCAGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp AAGCTGACCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCATCTTTCTCCTCCTCCTaGCTGGGTGGCATCAGCATC +
Preference number: 4 (lower is better)
Translates to: KLTLRLAEDNPFCPLHRASFSSS*LGGISI
Trigger: GATGCTGATGCCACCCAGCCAGGAGGAGGAGAAAGA...TGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGGTCAGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CCACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGAACATCGCCACCTTCTaGATGCCCCGCAGAACAGCC +
Preference number: 4 (lower is better)
Translates to: PLHRAMPQVMRWSVPLALNIATF*MPRRTA
Trigger: GGCTGTTCTGCGGGGCATCCAGAAGGTGGCGATGTT...CAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp GTTCCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGAACATCGCCACCTTCTaGATGCCCCGCAGAACAGCC +
Preference number: 4 (lower is better)
Translates to: VPLALCRLKQVEALLLVPNIATF*MPRRTA
Trigger: GGCTGTTCTGCGGGGCATCCAGAAGGTGGCGATGTT...CGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp AAGCTGACCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAACCACCCAGTTCCCTTaGACCAACATCGCCACCTTC +
Preference number: 4 (lower is better)
Translates to: KLTLRLAEDNPFCPLHRATTQFP*TNIATF
Trigger: GAAGGTGGCGATGTTGGTCCAAGGGAACTGGGTGGT...TGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGGTCAGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTACCACCCAGTTCCCTTaGACCAACATCGCCACCTTC +
Preference number: 4 (lower is better)
Translates to: RLKQVEALLLVPPFFLGLTTQFP*TNIATF
Trigger: GAAGGTGGCGATGTTGGTCCAAGGGAACTGGGTGGT...AAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAATGCCACGGCTGGACGAGTCCTTaGGGTATAGGATGTCACTCT +
Preference number: 4 (lower is better)
Translates to: PCDWLRIIPSVHCTVQCHGWTSP*GIGCHS
Trigger: AGAGTGACATCCTATACCCCAAGGACTCGTCCAGCC...GTGGCATTGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCGGCTGGACGAGTCCTTaGGGTATAGGATGTCACTCT +
Preference number: 4 (lower is better)
Translates to: PLALCRLKQVEALLLVPPGWTSP*GIGCHS
Trigger: AGAGTGACATCCTATACCCCAAGGACTCGTCCAGCC...GGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp ACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGCGCCGCTGTGAGGGCTaGACGAGTCCTTGGGGTATA +
Preference number: 4 (lower is better)
Translates to: TAPCNATGHEMVSSSCSVRRCEG*TSPWGI
Trigger: TATACCCCAAGGACTCGTCCAGCCCTCACAGCGGCG...CACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp TGTCCACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTAGCATGTGCTGCCGCTaGACCACATCCGGGTGCTTC +
Preference number: 4 (lower is better)
Translates to: CPLHRAMPQVMRWSVPLASMCCR*TTSGCF
Trigger: GAAGCACCCGGATGTGGTCCAGCGGCAGCACATGCT...AGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGTGGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp TCCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCGCTGGGCCTTGGTTTTaGCTACTTGGATCCGCTGGT +
Preference number: 4 (lower is better)
Translates to: SSCSVSSEASRGPTSGSAAGPWF*LLGSAG
Trigger: ACCAGCGGATCCAAGTAGCCAAAACCAAGGCCCAGC...GGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTGCTGGGCCTTGGTTTTaGCTACTTGGATCCGCTGGT +
Preference number: 4 (lower is better)
Translates to: RLKQVEALLLVPPFFLGLAGPWF*LLGSAG
Trigger: ACCAGCGGATCCAAGTAGCCAAAACCAAGGCCCAGC...AAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCGGTTCTGCTGGGCCTTaGTTTTGGCTACTTGGATCC +
Preference number: 4 (lower is better)
Translates to: PLALCRLKQVEALLLVPPGSAGP*FWLLGS
Trigger: GGATCCAAGTAGCCAAAACCAAGGCCCAGCAGAACC...GGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCAACGCGTGGTTCTGCTaGGCCTTGGTTTTGGCTACT +
Preference number: 4 (lower is better)
Translates to: PLALCRLKQVEALLLVPPNAWFC*ALVLAT
Trigger: AGTAGCCAAAACCAAGGCCCAGCAGAACCACGCGTT...GGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp TTTCAAATTGTACTGCAAAGAAGGTCCCAGCTGGTCTCTTCTGGGAGTGATCTAGAGCCACAGGGGTGCTaGCGCAGCCCTGGGGCGGGT +
Preference number: 4 (lower is better)
Translates to: FQIVLQRRSQLVSSGSDLEPQGC*RSPGAG
Trigger: ACCCGCCCCAGGGCTGCGCCAGCACCCCTGTGGCTC...TAGATCACTCCCAGAAGAGACCAGCTGGGACCTTCTTTGCAGTACAATTTGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp TCCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCTCGAGGCCCTACTTCTaGTTCCGCCCTTCTTCCTTG +
Preference number: 4 (lower is better)
Translates to: SSCSVSSEASRGPTSGSASRPYF*FRPSSL
Trigger: CAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTCGA...GGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTTCGAGGCCCTACTTCTaGTTCCGCCCTTCTTCCTTG +
Preference number: 4 (lower is better)
Translates to: RLKQVEALLLVPPFFLGLSRPYF*FRPSSL
Trigger: CAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTCGA...AAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp TGGATACCCGTCCACAGCATGTGCTGCCGCTGGACCACATCCGGGTGCTTCTTGGGACGCACAGGGTACTaGAATAGATACAGCTTTTCC +
Preference number: 4 (lower is better)
Translates to: WIPVHSMCCRWTTSGCFLGRTGY*NRYSFS
Trigger: GGAAAAGCTGTATCTATTTCAGTACCCTGTGCGTCC...CAAGAAGCACCCGGATGTGGTCCAGCGGCAGCACATGCTGTGGACGGGTATCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564750.5
CDS-3UTR TCA 90 bp CCACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGGGGCTTGATCTTGGCTaGGAGGTGCGGAATGTCATC +
Preference number: 4 (lower is better)
Translates to: PLHRAMPQVMRWSVPLALGLDLG*EVRNVI
Trigger: GATGACATTCCGCACCTCTCAGCCAAGATCAAGCCC...CAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp CTTAAGCTGACCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGGGCTTGATCTTGGCTaGGAGGTGCGGAATGTCATC +
Preference number: 4 (lower is better)
Translates to: LKLTLRLAEDNPFCPLHRGLDLG*EVRNVI
Trigger: GATGACATTCCGCACCTCTCAGCCAAGATCAAGCCC...ACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGGTCAGCTTAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp TGTCCACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTTCTGCTGCTTGGGCTTaGTCTTGGCTGAGAGGTGCG +
Preference number: 4 (lower is better)
Translates to: CPLHRAMPQVMRWSVPLASAAWA*SWLRGA
Trigger: CGCACCTCTCAGCCAAGATCAAGCCCAAGCAGCAGA...AGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGTGGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp GAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGTTATCTGCTGCTTGGGCTTaGTCTTGGCTGAGAGGTGCG +
Preference number: 4 (lower is better)
Translates to: EALLLVPPFFLGLRFAGLSAAWA*SWLRGA
Trigger: CGCACCTCTCAGCCAAGATCAAGCCCAAGCAGCAGA...TAACCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp CGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGTCGTCTGTCTGCTGCTTGGGCTTaGTCTTGGCTGAGAGGTGCG +
Preference number: 4 (lower is better)
Translates to: RAMPQVMRWSVPLALCRLSAAWA*SWLRGA
Trigger: CGCACCTCTCAGCCAAGATCAAGCCCAAGCAGCAGA...CAGACGACACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp CGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGTCGTCTGTTCCGCCTCATCCTGTaGAGAGTCCCCTGCCTCGTT +
Preference number: 4 (lower is better)
Translates to: RAMPQVMRWSVPLALCRLFRLIL*RVPCLV
Trigger: AACGAGGCAGGGGACTCTTCACAGGATGAGGCGGAA...CAGACGACACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp CTTAAGCTGACCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTACTCACTGGGTGACTTaGCGAGCTCCGTGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: LKLTLRLAEDNPFCPLHRTHWVT*RAPCSP
Trigger: TGGAGAACACGGAGCTCGTCAAGTCACCCAGTGAGT...ACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGGTCAGCTTAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp GAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGTTAATCAGGATCTTGATCTaGTCGGCCAGGGGCAGCGTG +
Preference number: 4 (lower is better)
Translates to: EALLLVPPFFLGLRFAGLIRILI*SARGSV
Trigger: CACGCTGCCCCTGGCCGATCAGATCAAGATCCTGAT...TAACCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp CGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGTCGTCTGATCAGGATCTTGATCTaGTCGGCCAGGGGCAGCGTG +
Preference number: 4 (lower is better)
Translates to: RAMPQVMRWSVPLALCRLIRILI*SARGSV
Trigger: CACGCTGCCCCTGGCCGATCAGATCAAGATCCTGAT...CAGACGACACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp TGTCCACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTATCAGGATCTTGATCTaGTCGGCCAGGGGCAGCGTG +
Preference number: 4 (lower is better)
Translates to: CPLHRAMPQVMRWSVPLAIRILI*SARGSV
Trigger: CACGCTGCCCCTGGCCGATCAGATCAAGATCCTGAT...AGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGTGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp CTGGGTGGCATCAGCATCATCAGGTACTCACTGGGTGACTTGACGAGCTCCGTGTCTTCATCAGGATCTTaGTCTGATCGGCCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: LGGISIIRYSLGDLTSSVSSSGS*SDRPGA
Trigger: TGCCCCTGGCCGATCAGATCAAGATCCTGATGAAGA...CACGGAGCTCGTCAAGTCACCCAGTGAGTACCTGATGATGCTGATGCCACCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564750.5
ENST00000565551.5
CDS-3UTR TCA 90 bp GTCGAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGTCTTCATCAGGATCTTaGTCTGATCGGCCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: VEALLLVPPFFLGLRFAGSSSGS*SDRPGA
Trigger: TGCCCCTGGCCGATCAGATCAAGATCCTGATGAAGA...CCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTCGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp CAAATTGTACTGCAAAGAAGGTCCCAGCTGGTCTCTTCTGGGAGTGATCTAACTGCAGGCACGCCGCTGTaGGGGCTGGACGAGTCCTTG +
Preference number: 4 (lower is better)
Translates to: QIVLQRRSQLVSSGSDLTAGTPL*GLDESL
Trigger: CAAGGACTCGTCCAGCCCTCACAGCGGCGTGCCTGC...AGTTAGATCACTCCCAGAAGAGACCAGCTGGGACCTTCTTTGCAGTACAATTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp CAAAATTATGTACGTGACTCGCCTCTTTCTAGTGGACAGTGCTGCTCTGTCTTCGCAGGCACGCCGCTGTaGGGGCTGGACGAGTCCTTG +
Preference number: 4 (lower is better)
Translates to: QNYVRDSPLSSGQCCSVFAGTPL*GLDESL
Trigger: CAAGGACTCGTCCAGCCCTCACAGCGGCGTGCCTGC...GAAGACAGAGCAGCACTGTCCACTAGAAAGAGGCGAGTCACGTACATAATTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp CTTAAGCTGACCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTACTCCCAGCCTTTGTTaGTCCTCACCACGGCCATGT +
Preference number: 4 (lower is better)
Translates to: LKLTLRLAEDNPFCPLHRTPSLC*SSPRPC
Trigger: ACATGGCCGTGGTGAGGATCAACAAAGGCTGGGAGT...ACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGGTCAGCTTAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp CAGGTACTGACGCTCATGCTCAGAGCGACTGTCCCTCAGGCCATAGTAATGCAGACTCCCAGCCTTTGTTaGTCCTCACCACGGCCATGT +
Preference number: 4 (lower is better)
Translates to: QVLTLMLRATVPQAIVMQTPSLC*SSPRPC
Trigger: ACATGGCCGTGGTGAGGATCAACAAAGGCTGGGAGT...CTGCATTACTATGGCCTGAGGGACAGTCGCTCTGAGCATGAGCGTCAGTACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564750.5
CDS-3UTR TCA 90 bp CTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCTTCAGCACAAACTGTCTCTaGAAGGTGGCCTCCACGAAG +
Preference number: 4 (lower is better)
Translates to: LALCRLKQVEALLLVPPFSTNCL*KVASTK
Trigger: CTTCGTGGAGGCCACCTTTCAGAGACAGTTTGTGCT...GAAGGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp CAAAATTATGTACGTGACTCGCCTCTTTCTAGTGGACAGTGCTGCTCTGTCTTCGGTCCGAGATGCCGCTaGAGAGTGTGTGGCCGGGGG +
Preference number: 4 (lower is better)
Translates to: QNYVRDSPLSSGQCCSVFGPRCR*RVCGRG
Trigger: CCCCCGGCCACACACTCTTCAGCGGCATCTCGGACC...GAAGACAGAGCAGCACTGTCCACTAGAAAGAGGCGAGTCACGTACATAATTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp CCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCTCTTCTCCACACTCTTaGGTCAACCGAGACTGGATC +
Preference number: 4 (lower is better)
Translates to: PLALCRLKQVEALLLVPPSSPHS*VNRDWI
Trigger: GATCCAGTCTCGGTTGACTCAAGAGTGTGGAGAAGA...GGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299853.10
ENST00000418581.6
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp GCTCCGTTCCCTCTAGATACACGTAACGCTGAGCCCAACAAGATCGCCTTCCTGTTGCTCTGTGTCGTCTaGAGCAAGTCGAGGCCCTAC +
Preference number: 4 (lower is better)
Translates to: APFPLDTRNAEPNKIAFLLLCVV*SKSRPY
Trigger: GTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAA...CAGGAAGGCGATCTTGTTGGGCTCAGCGTTACGTGTATCTAGAGGGAACGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp CCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCCAATGCCACAGGTCATaGGATGGTCAGTTCCTCTTG +
Preference number: 4 (lower is better)
Translates to: PLALCRLKQVEALLLVPPQCHRS*DGQFLL
Trigger: CAAGAGGAACTGACCATCTCATGACCTGTGGCATTG...GGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp TCCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCTAACTAACTTAAGCTaGCCCTGCGACTGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: SSCSVSSEASRGPTSGSALTNLS*PCDWLR
Trigger: CCTCAGCCAGTCGCAGGGTCAGCTTAAGTTAGTTAG...GGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp CCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCGGTTGTTGTCAAAGGTaGAGTGGCCACAGAATCCCA +
Preference number: 4 (lower is better)
Translates to: PLALCRLKQVEALLLVPPGCCQR*SGHRIP
Trigger: TGGGATTCTGTGGCCACTTCACCTTTGACAACAACC...GGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp CCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAATGCCACGGTTGTTGTCAAAGGTaGAGTGGCCACAGAATCCCA +
Preference number: 4 (lower is better)
Translates to: PCDWLRIIPSVHCTVQCHGCCQR*SGHRIP
Trigger: TGGGATTCTGTGGCCACTTCACCTTTGACAACAACC...GTGGCATTGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp CCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCCTTACACAGCAGTCCTaGTCACTCATGTCTCCAGAC +
Preference number: 4 (lower is better)
Translates to: PLALCRLKQVEALLLVPPLTQQS*SLMSPD
Trigger: GTCTGGAGACATGAGTGATCAGGACTGCTGTGTAAG...GGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359210.8
CDS-3UTR TCA 90 bp GTCGAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGTCTGCTGCTTGGGCTTaGTCTCCTGTACAACTGGGT +
Preference number: 4 (lower is better)
Translates to: VEALLLVPPFFLGLRFAGSAAWA*SPVQLG
Trigger: ACCCAGTTGTACAGGAGATCAAGCCCAAGCAGCAGA...CCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTCGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418581.6
CDS-3UTR GCA 90 bp AGAAACTTTCAAAATTATGTACGTGACTCGCCTCTTTCTAGTGGACAGTGCTGCCAGTTACCCGCGGGCTaGAGAGACGGCGGCGGCCCG +
Preference number: 4 (lower is better)
Translates to: RNFQNYVRDSPLSSGQCCQLPAG*RDGGGP
Trigger: CGGGCCGCCGCCGTCTCTGCAGCCCGCGGGTAACTG...GCAGCACTGTCCACTAGAAAGAGGCGAGTCACGTACATAATTTTGAAAGTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCAGCTCTACCTTCTGCTaGTTGGGCTTGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: PLALCRLKQVEALLLVPPSSTFC*LGLILA
Trigger: AGCCAAGATCAAGCCCAAGCAGCAGAAGGTAGAGCT...GGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000564209.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAATGCCACAGGTCTCTGCTCCCCTTTGCTaGGGCAATAGTTGGGGTTCA +
Preference number: 4 (lower is better)
Translates to: RLAEDNPFCPLHRAMPQVSAPLC*GNSWGS
Trigger: TGAACCCCAACTATTGCCGCAGCAAAGGGGAGCAGA...GACCTGTGGCATTGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp AAGCTGACCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCATCTGCTCCCCTTTGCTaGGGCAATAGTTGGGGTTCA +
Preference number: 4 (lower is better)
Translates to: KLTLRLAEDNPFCPLHRASAPLC*GNSWGS
Trigger: TGAACCCCAACTATTGCCGCAGCAAAGGGGAGCAGA...TGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGGTCAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp TCTGCTCCCCTTTGCTGCGGCAATAGTTGGGGTTCAGGGTGTCGATGGCCATCTTCTGCTCCCCTTTGCTaGGGCAATAGTTGGGGTTCA +
Preference number: 4 (lower is better)
Translates to: SAPLCCGNSWGSGCRWPSSAPLC*GNSWGS
Trigger: TGAACCCCAACTATTGCCGCAGCAAAGGGGAGCAGA...AGATGGCCATCGACACCCTGAACCCCAACTATTGCCGCAGCAAAGGGGAGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000561494.5
CDS-3UTR GCA 90 bp GTCGAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGTCTGCTCCCCTTTGCTaGGGCAATAGTTGGGGTTCA +
Preference number: 4 (lower is better)
Translates to: VEALLLVPPFFLGLRFAGSAPLC*GNSWGS
Trigger: TGAACCCCAACTATTGCCGCAGCAAAGGGGAGCAGA...CCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTCGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CACGTTCAGCGCAATCTGCTCCCCTTTGCTGCGGCAATAGTTGGGGTTCAGGGTCAATCTGCTCCCCTTTaGTGCGGCAATAGTTGGGGT +
Preference number: 4 (lower is better)
Translates to: HVQRNLLPFAAAIVGVQGQSAPL*CGNSWG
Trigger: ACCCCAACTATTGCCGCAGCAAAGGGGAGCAGATTG...ACCCTGAACCCCAACTATTGCCGCAGCAAAGGGGAGCAGATTGCGCTGAACGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000561494.5
CDS-3UTR GCA 90 bp CGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAATGCCACAGGTCCAATCTGCTCCCCTTTaGTGCGGCAATAGTTGGGGT +
Preference number: 4 (lower is better)
Translates to: RLAEDNPFCPLHRAMPQVQSAPL*CGNSWG
Trigger: ACCCCAACTATTGCCGCAGCAAAGGGGAGCAGATTG...GACCTGTGGCATTGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CTTAAGCTGACCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTACGTTCAGCGCAATCTaGTCCCCTTTGCTGCGGCAA +
Preference number: 4 (lower is better)
Translates to: LKLTLRLAEDNPFCPLHRTFSAI*SPLLRQ
Trigger: TTGCCGCAGCAAAGGGGAGCAGATTGCGCTGAACGT...ACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGGTCAGCTTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAATGCCACGAAGAGCAGAAGGTCTaGTTGTCCATCAGCTTCGAG +
Preference number: 4 (lower is better)
Translates to: PCDWLRIIPSVHCTVQCHEEQKV*LSISFE
Trigger: CTCGAAGCTGATGGACAAGCAGACCTTCTGCTCTTC...GTGGCATTGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp TGTCCCTCAGGCCATAGTAATGCAGGTGGACCCAGGGCTCCTCTGCGTGCTTCTGAAGAGCAGAAGGTCTaGTTGTCCATCAGCTTCGAG +
Preference number: 4 (lower is better)
Translates to: CPSGHSNAGGPRAPLRASEEQKV*LSISFE
Trigger: CTCGAAGCTGATGGACAAGCAGACCTTCTGCTCTTC...AGAAGCACGCAGAGGAGCCCTGGGTCCACCTGCATTACTATGGCCTGAGGGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564750.5
ENST00000565551.5
CDS-3UTR GCA 90 bp CGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAATGCCACAGGTCACCTTGCCTGTAGAGTaGAGCGGCATAACGGGATGT +
Preference number: 4 (lower is better)
Translates to: RLAEDNPFCPLHRAMPQVTLPVE*SGITGC
Trigger: ACATCCCGTTATGCCGCTGCACTCTACAGGCAAGGT...GACCTGTGGCATTGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCTTCACCTTGCCTGTAGAGTaGAGCGGCATAACGGGATGT +
Preference number: 4 (lower is better)
Translates to: LALCRLKQVEALLLVPPFTLPVE*SGITGC
Trigger: ACATCCCGTTATGCCGCTGCACTCTACAGGCAAGGT...GAAGGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp TCCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCACCTTGCCTGTAGAGTaGAGCGGCATAACGGGATGT +
Preference number: 4 (lower is better)
Translates to: SSCSVSSEASRGPTSGSATLPVE*SGITGC
Trigger: ACATCCCGTTATGCCGCTGCACTCTACAGGCAAGGT...GGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CTTAAGCTGACCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCCGCAGCTGCAGGATaGCATGTAAAGGTGTCAGGT +
Preference number: 4 (lower is better)
Translates to: LKLTLRLAEDNPFCPLHRAAAAG*HVKVSG
Trigger: ACCTGACACCTTTACATGGCATCCTGCAGCTGCGGC...ACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGGTCAGCTTAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CTTAAGCTGACCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTAAGCTGGGCCGCAGCTaGAGGATGCCATGTAAAGGT +
Preference number: 4 (lower is better)
Translates to: LKLTLRLAEDNPFCPLHRKLGRS*RMPCKG
Trigger: ACCTTTACATGGCATCCTGCAGCTGCGGCCCAGCTT...ACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGGTCAGCTTAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp GTTCCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGAAGCTGGGCCGCAGCTaGAGGATGCCATGTAAAGGT +
Preference number: 4 (lower is better)
Translates to: VPLALCRLKQVEALLLVPKLGRS*RMPCKG
Trigger: ACCTTTACATGGCATCCTGCAGCTGCGGCCCAGCTT...CGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CTTAAGCTGACCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTCAGGGCTCCTCTGCGTaGTTCTTCTGCAGGAACTCA +
Preference number: 4 (lower is better)
Translates to: LKLTLRLAEDNPFCPLHRQGSSA*FFCRNS
Trigger: TGAGTTCCTGCAGAAGAAGCACGCAGAGGAGCCCTG...ACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGGTCAGCTTAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp GCTCCGTTCCCTCTAGATACACGTAACGCTGAGCCCAACAAGATCGCCTTCCTGCAGGGCTCCTCTGCGTaGTTCTTCTGCAGGAACTCA +
Preference number: 4 (lower is better)
Translates to: APFPLDTRNAEPNKIAFLQGSSA*FFCRNS
Trigger: TGAGTTCCTGCAGAAGAAGCACGCAGAGGAGCCCTG...CAGGAAGGCGATCTTGTTGGGCTCAGCGTTACGTGTATCTAGAGGGAACGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp GTTCCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGACCACCCAGCGGCTCTaGGTGAACTTCCACATAACG +
Preference number: 4 (lower is better)
Translates to: VPLALCRLKQVEALLLVPTTQRL*VNFHIT
Trigger: CGTTATGTGGAAGTTCACGCAGAGCCGCTGGGTGGT...CGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp GCTCCGTTCCCTCTAGATACACGTAACGCTGAGCCCAACAAGATCGCCTTCCTGACCACCCAGCGGCTCTaGGTGAACTTCCACATAACG +
Preference number: 4 (lower is better)
Translates to: APFPLDTRNAEPNKIAFLTTQRL*VNFHIT
Trigger: CGTTATGTGGAAGTTCACGCAGAGCCGCTGGGTGGT...CAGGAAGGCGATCTTGTTGGGCTCAGCGTTACGTGTATCTAGAGGGAACGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp GTTCCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCTCACCACGGCCATGTaGTCCAGGAAGTCCTTCACA +
Preference number: 4 (lower is better)
Translates to: VPLALCRLKQVEALLLVPLTTAM*SRKSFT
Trigger: TGTGAAGGACTTCCTGGAGCACATGGCCGTGGTGAG...CGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp GCTCCGTTCCCTCTAGATACACGTAACGCTGAGCCCAACAAGATCGCCTTCCTGCTCACCACGGCCATGTaGTCCAGGAAGTCCTTCACA +
Preference number: 4 (lower is better)
Translates to: APFPLDTRNAEPNKIAFLLTTAM*SRKSFT
Trigger: TGTGAAGGACTTCCTGGAGCACATGGCCGTGGTGAG...CAGGAAGGCGATCTTGTTGGGCTCAGCGTTACGTGTATCTAGAGGGAACGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCTTCTGGACCACATCCGGGTaGTTCTTGATGAACTCCCCA +
Preference number: 4 (lower is better)
Translates to: LALCRLKQVEALLLVPPFWTTSG*FLMNSP
Trigger: TGGGGAGTTCATCAAGAAGCACCCGGATGTGGTCCA...GAAGGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTTGGACCACATCCGGGTaGTTCTTGATGAACTCCCCA +
Preference number: 4 (lower is better)
Translates to: RLKQVEALLLVPPFFLGLWTTSG*FLMNSP
Trigger: TGGGGAGTTCATCAAGAAGCACCCGGATGTGGTCCA...AAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp TTTCAAATTGTACTGCAAAGAAGGTCCCAGCTGGTCTCTTCTGGGAGTGATCTAGCAGGCACCCGCAGCTaGTCCTTCCGCCGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: FQIVLQRRSQLVSSGSDLAGTRS*SFRRCS
Trigger: GCTGCAGCGGCGGAAGGAGCAGCTGCGGGTGCCTGC...TAGATCACTCCCAGAAGAGACCAGCTGGGACCTTCTTTGCAGTACAATTTGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp TTTCAAATTGTACTGCAAAGAAGGTCCCAGCTGGTCTCTTCTGGGAGTGATCTAGCCCGTTGGCCAGCTTaGTGTGGAGGCCGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: FQIVLQRRSQLVSSGSDLARWPA*CGGRWG
Trigger: CCCCCAGCGGCCTCCACAGCAAGCTGGCCAACGGGC...TAGATCACTCCCAGAAGAGACCAGCTGGGACCTTCTTTGCAGTACAATTTGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp GTAACGCTGAGCCCAACAAGATCGCCTTCCTGTAACCATTTGAAGATAGCACCACAGCCCTGGGGCGGGTaGCCGTTGAAGCTGTCTGTG +
Preference number: 4 (lower is better)
Translates to: VTLSPTRSPSCNHLKIAPQPWGG*PLKLSV
Trigger: CACAGACAGCTTCAACGGGCACCCGCCCCAGGGCTG...TGGTGCTATCTTCAAATGGTTACAGGAAGGCGATCTTGTTGGGCTCAGCGTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGTCGTCTGAAAGGCACCAGTATCTaGTTGCAACCGGCGGCCAGC +
Preference number: 4 (lower is better)
Translates to: RAMPQVMRWSVPLALCRLKGTSI*LQPAAS
Trigger: GCTGGCCGCCGGTTGCAAGCAGATACTGGTGCCTTT...CAGACGACACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CCATTAGCTCCGTTCCCTCTAGATACACGTAACGCTGAGCCCAACAAGATCGCCAAAGGCACCAGTATCTaGTTGCAACCGGCGGCCAGC +
Preference number: 4 (lower is better)
Translates to: PLAPFPLDTRNAEPNKIAKGTSI*LQPAAS
Trigger: GCTGGCCGCCGGTTGCAAGCAGATACTGGTGCCTTT...GGCGATCTTGTTGGGCTCAGCGTTACGTGTATCTAGAGGGAACGGAGCTAATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CAGGTACTGACGCTCATGCTCAGAGCGACTGTCCCTCAGGCCATAGTAATGCAGCTGTCCACTGCACCGTaGAATGCCACAGGTCATGAG +
Preference number: 4 (lower is better)
Translates to: QVLTLMLRATVPQAIVMQLSTAP*NATGHE
Trigger: CTCATGACCTGTGGCATTGCACGGTGCAGTGGACAG...CTGCATTACTATGGCCTGAGGGACAGTCGCTCTGAGCATGAGCGTCAGTACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564750.5
CDS-3UTR GCA 90 bp CGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAATGCCACAGGTCACGTTCAGCGCAATCTaGTCCCCTTTGCTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: RLAEDNPFCPLHRAMPQVTFSAI*SPLLLL
Trigger: CAGCAGAAGCAAAGGGGAGCAGATTGCGCTGAACGT...GACCTGTGGCATTGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564750.5
CDS-3UTR GCA 90 bp TCCTCCTCCTGGCTGGGTGGCATCAGCATCATCAGGTACTCACTGGGTGACTTGAGCTTGCCTGTAGAGTaGAGCGGCATAACGGGATGT +
Preference number: 4 (lower is better)
Translates to: SSSWLGGISIIRYSLGDLSLPVE*SGITGC
Trigger: ACATCCCGTTATGCCGCTGCACTCTACAGGCAAGCT...CAAGTCACCCAGTGAGTACCTGATGATGCTGATGCCACCCAGCCAGGAGGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565551.5
CDS-3UTR CCA 90 bp GCGGAATGTCATCGTAGGTCATCGAGGCTGGACGCACAGGGTACCACGGTCTCGGATCTCCTGTACAACTaGGTCATCCTCTTCATTGGC +
Preference number: 4 (lower is better)
Translates to: AECHRRSSRLDAQGTTVSDLLYN*VILFIG
Trigger: GCCAATGAAGAGGATGACCCAGTTGTACAGGAGATC...CGAGACCGTGGTACCCTGTGCGTCCAGCCTCGATGACCTACGATGACATTCCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561494.5
CDS-3UTR CCA 90 bp CGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAATGCCACAGGTCGTAGGTCATCGAGGCTaGACGCACAGGGTACTGAAA +
Preference number: 4 (lower is better)
Translates to: RLAEDNPFCPLHRAMPQVVGHRG*THRVLK
Trigger: TTTCAGTACCCTGTGCGTCCAGCCTCGATGACCTAC...GACCTGTGGCATTGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCTTCGGTTCAGGGTGTCGATaGCCATCTCAAGCTCTACCT +
Preference number: 4 (lower is better)
Translates to: LALCRLKQVEALLLVPPFGSGCR*PSQALP
Trigger: AGGTAGAGCTTGAGATGGCCATCGACACCCTGAACC...GAAGGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp AAGCTGACCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAGGTTCAGGGTGTCGATaGCCATCTCAAGCTCTACCT +
Preference number: 4 (lower is better)
Translates to: KLTLRLAEDNPFCPLHRAGSGCR*PSQALP
Trigger: AGGTAGAGCTTGAGATGGCCATCGACACCCTGAACC...TGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGGTCAGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CCACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGCTGCGGCAATAGTTaGGGTTCAGGGTGTCGATGG +
Preference number: 4 (lower is better)
Translates to: PLHRAMPQVMRWSVPLALCCGNS*GSGCRW
Trigger: CCATCGACACCCTGAACCCCAACTATTGCCGCAGCA...CAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CGGGTGCTTCTTGATGAACTCCCCATCATAAGGCAGAATGAACTCCCAGCCTTTTCGAGGAATACGTGCTaGTCTCGTCGGCGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: RVLLDELPIIRQNELPAFSRNTC*SRRRRP
Trigger: GGGCCTGCGCCGACGAGACCAGCACGTATTCCTCGA...AAAGGCTGGGAGTTCATTCTGCCTTATGATGGGGAGTTCATCAAGAAGCACCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564750.5
CDS-3UTR CCA 90 bp CGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAATGCCACAGGTCGTGTTACTGGTGGTCTaGGAAGAGCAGAAGGTCTGC +
Preference number: 4 (lower is better)
Translates to: RLAEDNPFCPLHRAMPQVVLLVV*EEQKVC
Trigger: GCAGACCTTCTGCTCTTCCCAGACCACCAGTAACAC...GACCTGTGGCATTGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CTGGGTGGCATCAGCATCATCAGGTACTCACTGGGTGACTTGACGAGCTCCGTGGGGATGTGTTACTGGTaGTCTGGGAAGAGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: LGGISIIRYSLGDLTSSVGMCYW*SGKSRR
Trigger: CCTTCTGCTCTTCCCAGACCACCAGTAACACATCCC...CACGGAGCTCGTCAAGTCACCCAGTGAGTACCTGATGATGCTGATGCCACCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564750.5
ENST00000565551.5
CDS-3UTR CCA 90 bp AAGCTGACCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAGGGATGTGTTACTGGTaGTCTGGGAAGAGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: KLTLRLAEDNPFCPLHRAGMCYW*SGKSRR
Trigger: CCTTCTGCTCTTCCCAGACCACCAGTAACACATCCC...TGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGGTCAGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCAACGGGATGTGTTACTaGTGGTCTGGGAAGAGCAGA +
Preference number: 4 (lower is better)
Translates to: PLALCRLKQVEALLLVPPNGMCY*WSGKSR
Trigger: TCTGCTCTTCCCAGACCACCAGTAACACATCCCGTT...GGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAATGCCACAACGGGATGTGTTACTaGTGGTCTGGGAAGAGCAGA +
Preference number: 4 (lower is better)
Translates to: PCDWLRIIPSVHCTVQCHNGMCY*WSGKSR
Trigger: TCTGCTCTTCCCAGACCACCAGTAACACATCCCGTT...GTGGCATTGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CAAATTGTACTGCAAAGAAGGTCCCAGCTGGTCTCTTCTGGGAGTGATCTAACTAGTCCCCTGCCTCGTTaGCCGCCTCCCTCTCCCGGT +
Preference number: 4 (lower is better)
Translates to: QIVLQRRSQLVSSGSDLTSPLPR*PPPSPG
Trigger: ACCGGGAGAGGGAGGCGGCCAACGAGGCAGGGGACT...AGTTAGATCACTCCCAGAAGAGACCAGCTGGGACCTTCTTTGCAGTACAATTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CAAATTGTACTGCAAAGAAGGTCCCAGCTGGTCTCTTCTGGGAGTGATCTAACTGACTGCACACGGCGCTaGCGGGCCTGCTCTGACTCC +
Preference number: 4 (lower is better)
Translates to: QIVLQRRSQLVSSGSDLTDCTRR*RACSDS
Trigger: GGAGTCAGAGCAGGCCCGCCAGCGCCGTGTGCAGTC...AGTTAGATCACTCCCAGAAGAGACCAGCTGGGACCTTCTTTGCAGTACAATTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CCACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGCTCCTCCTGGCTGGGTaGCATCAGCATCATCAGGTA +
Preference number: 4 (lower is better)
Translates to: PLHRAMPQVMRWSVPLALLLLAG*HQHHQV
Trigger: TACCTGATGATGCTGATGCCACCCAGCCAGGAGGAG...CAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CAGGTACTGACGCTCATGCTCAGAGCGACTGTCCCTCAGGCCATAGTAATGCAGCTCCTCCTGGCTGGGTaGCATCAGCATCATCAGGTA +
Preference number: 4 (lower is better)
Translates to: QVLTLMLRATVPQAIVMQLLLAG*HQHHQV
Trigger: TACCTGATGATGCTGATGCCACCCAGCCAGGAGGAG...CTGCATTACTATGGCCTGAGGGACAGTCGCTCTGAGCATGAGCGTCAGTACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564750.5
ENST00000565551.5
CDS-3UTR CCA 90 bp GTTCCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGTCTTTCTCCTCCTCCTaGCTGGGTGGCATCAGCATC +
Preference number: 4 (lower is better)
Translates to: VPLALCRLKQVEALLLVPSFSSS*LGGISI
Trigger: GATGCTGATGCCACCCAGCCAGGAGGAGGAGAAAGA...CGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CCACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGACCACCCAGTTCCCTTaGACCAACATCGCCACCTTC +
Preference number: 4 (lower is better)
Translates to: PLHRAMPQVMRWSVPLALTTQFP*TNIATF
Trigger: GAAGGTGGCGATGTTGGTCCAAGGGAACTGGGTGGT...CAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp AAGCTGACCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAGGCTGGACGAGTCCTTaGGGTATAGGATGTCACTCT +
Preference number: 4 (lower is better)
Translates to: KLTLRLAEDNPFCPLHRAGWTSP*GIGCHS
Trigger: AGAGTGACATCCTATACCCCAAGGACTCGTCCAGCC...TGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGGTCAGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCTTCGGCTGGACGAGTCCTTaGGGTATAGGATGTCACTCT +
Preference number: 4 (lower is better)
Translates to: LALCRLKQVEALLLVPPFGWTSP*GIGCHS
Trigger: AGAGTGACATCCTATACCCCAAGGACTCGTCCAGCC...GAAGGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp ACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGCCTCGGCGCAGAGTTTaGTCACGGTTGCCACCTCTT +
Preference number: 4 (lower is better)
Translates to: TAPCNATGHEMVSSSCSVPRRRV*SRLPPL
Trigger: AAGAGGTGGCAACCGTGACCAAACTCTGCGCCGAGG...CACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGTCGTCTGCCTCGGCGCAGAGTTTaGTCACGGTTGCCACCTCTT +
Preference number: 4 (lower is better)
Translates to: RAMPQVMRWSVPLALCRLPRRRV*SRLPPL
Trigger: AAGAGGTGGCAACCGTGACCAAACTCTGCGCCGAGG...CAGACGACACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp GGGCAGGCTGGCCAAGTGCAGATTGAAGAGGCGCTTGAGTTCGCTCAGCGTGAGAGACTTTTTCCAGTTTaGCCTGGATACCCGTCCACA +
Preference number: 4 (lower is better)
Translates to: GQAGQVQIEEALEFAQRERLFPV*PGYPST
Trigger: TGTGGACGGGTATCCAGGCCAAACTGGAAAAAGTCT...CTCACGCTGAGCGAACTCAAGCGCCTCTTCAATCTGCACTTGGCCAGCCTGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564750.5
CDS-3UTR CCA 90 bp GTCGAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGTTGGTTTTGGCTACTTaGATCCGCTGGTCCCCACAG +
Preference number: 4 (lower is better)
Translates to: VEALLLVPPFFLGLRFAGLVLAT*IRWSPQ
Trigger: CTGTGGGGACCAGCGGATCCAAGTAGCCAAAACCAA...CCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTCGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp TCCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCTTGGTTTTGGCTACTTaGATCCGCTGGTCCCCACAG +
Preference number: 4 (lower is better)
Translates to: SSCSVSSEASRGPTSGSALVLAT*IRWSPQ
Trigger: CTGTGGGGACCAGCGGATCCAAGTAGCCAAAACCAA...GGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp TGGCTGGGTGGCATCAGCATCATCAGGTACTCACTGGGTGACTTGACGAGCTCCTTGGTTTTGGCTACTTaGATCCGCTGGTCCCCACAG +
Preference number: 4 (lower is better)
Translates to: WLGGISIIRYSLGDLTSSLVLAT*IRWSPQ
Trigger: CTGTGGGGACCAGCGGATCCAAGTAGCCAAAACCAA...GGAGCTCGTCAAGTCACCCAGTGAGTACCTGATGATGCTGATGCCACCCAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564750.5
CDS-3UTR CCA 90 bp CGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTTTGGTTTTGGCTACTTaGATCCGCTGGTCCCCACAG +
Preference number: 4 (lower is better)
Translates to: RLKQVEALLLVPPFFLGLLVLAT*IRWSPQ
Trigger: CTGTGGGGACCAGCGGATCCAAGTAGCCAAAACCAA...AAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CTTAAGCTGACCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCTGGGCCTTGGTTTTaGCTACTTGGATCCGCTGGT +
Preference number: 4 (lower is better)
Translates to: LKLTLRLAEDNPFCPLHRAGPWF*LLGSAG
Trigger: ACCAGCGGATCCAAGTAGCCAAAACCAAGGCCCAGC...ACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGGTCAGCTTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp GTTCCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGGCTGGGCCTTGGTTTTaGCTACTTGGATCCGCTGGT +
Preference number: 4 (lower is better)
Translates to: VPLALCRLKQVEALLLVPAGPWF*LLGSAG
Trigger: ACCAGCGGATCCAAGTAGCCAAAACCAAGGCCCAGC...CGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAATGCCACAGGTCGGTTCTGCTGGGCCTTaGTTTTGGCTACTTGGATCC +
Preference number: 4 (lower is better)
Translates to: RLAEDNPFCPLHRAMPQVGSAGP*FWLLGS
Trigger: GGATCCAAGTAGCCAAAACCAAGGCCCAGCAGAACC...GACCTGTGGCATTGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTGGTTCTGCTGGGCCTTaGTTTTGGCTACTTGGATCC +
Preference number: 4 (lower is better)
Translates to: RLKQVEALLLVPPFFLGLGSAGP*FWLLGS
Trigger: GGATCCAAGTAGCCAAAACCAAGGCCCAGCAGAACC...AAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp GTCGAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGAACGCGTGGTTCTGCTaGGCCTTGGTTTTGGCTACT +
Preference number: 4 (lower is better)
Translates to: VEALLLVPPFFLGLRFAGNAWFC*ALVLAT
Trigger: AGTAGCCAAAACCAAGGCCCAGCAGAACCACGCGTT...CCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTCGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAATGCCACAGGTCACTGTCTCTGAAAGGTaGCCTCCACGAAGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: RLAEDNPFCPLHRAMPQVTVSER*PPRRPS
Trigger: TGAAGGCCTTCGTGGAGGCCACCTTTCAGAGACAGT...GACCTGTGGCATTGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp TCCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCACTGTCTCTGAAAGGTaGCCTCCACGAAGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: SSCSVSSEASRGPTSGSATVSER*PPRRPS
Trigger: TGAAGGCCTTCGTGGAGGCCACCTTTCAGAGACAGT...GGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CTTAAGCTGACCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTTCGAGGCCCTACTTCTaGTTCCGCCCTTCTTCCTTG +
Preference number: 4 (lower is better)
Translates to: LKLTLRLAEDNPFCPLHRSRPYF*FRPSSL
Trigger: CAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTCGA...ACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGGTCAGCTTAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAATGCCACCCACAGGTCATGAGATaGTCAGTTCCTCTTGCTCTG +
Preference number: 4 (lower is better)
Translates to: PCDWLRIIPSVHCTVQCHPQVMR*SVPLAL
Trigger: CAGAGCAAGAGGAACTGACCATCTCATGACCTGTGG...GTGGCATTGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCCCACAGGTCATGAGATaGTCAGTTCCTCTTGCTCTG +
Preference number: 4 (lower is better)
Translates to: PLALCRLKQVEALLLVPPPQVMR*SVPLAL
Trigger: CAGAGCAAGAGGAACTGACCATCTCATGACCTGTGG...GGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp CCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAATGCCACGGACGCACAGGGTACTaGAATAGATACAGCTTTTCC +
Preference number: 4 (lower is better)
Translates to: PCDWLRIIPSVHCTVQCHGRTGY*NRYSFS
Trigger: GGAAAAGCTGTATCTATTTCAGTACCCTGTGCGTCC...GTGGCATTGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp CACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGTCGTGGGCTTGATCTTGGCTaGGAGGTGCGGAATGTCATC +
Preference number: 4 (lower is better)
Translates to: HRAMPQVMRWSVPLALCRGLDLG*EVRNVI
Trigger: GATGACATTCCGCACCTCTCAGCCAAGATCAAGCCC...ACGACACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp GAAGAGCAGAAGGTCTGCTTGTCCATCAGCTTCGAGGAATACGTGCTGGTCTCGGGGCTTGATCTTGGCTaGGAGGTGCGGAATGTCATC +
Preference number: 4 (lower is better)
Translates to: EEQKVCLSISFEEYVLVSGLDLG*EVRNVI
Trigger: GATGACATTCCGCACCTCTCAGCCAAGATCAAGCCC...CGAGACCAGCACGTATTCCTCGAAGCTGATGGACAAGCAGACCTTCTGCTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561494.5
CDS-3UTR TCA 90 bp GCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGTTAGTATCTGCTGCTTGGGCTTaGTCTTGGCTGAGAGGTGCG +
Preference number: 4 (lower is better)
Translates to: ALLLVPPFFLGLRFAGLVSAAWA*SWLRGA
Trigger: CGCACCTCTCAGCCAAGATCAAGCCCAAGCAGCAGA...TACTAACCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp GAGTGGGGAAATAGCATAGACCGTCATTTAAACCTTCAGACAATTAGTGACTGTCTGGCGGGCCTGCTCTaGCTCCGGCCGGGAGAACCG +
Preference number: 4 (lower is better)
Translates to: EWGNSIDRHLNLQTISDCLAGLL*LRPGEP
Trigger: CGGTTCTCCCGGCCGGAGTCAGAGCAGGCCCGCCAG...ACAGTCACTAATTGTCTGAAGGTTTAAATGACGGTCTATGCTATTTCCCCACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp CACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGTCGTACTCACTGGGTGACTTaGCGAGCTCCGTGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: HRAMPQVMRWSVPLALCRTHWVT*RAPCSP
Trigger: TGGAGAACACGGAGCTCGTCAAGTCACCCAGTGAGT...ACGACACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp CACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGTCGTCAGGTACTCACTGGGTaGCTTGACGAGCTCCGTGTT +
Preference number: 4 (lower is better)
Translates to: HRAMPQVMRWSVPLALCRQVLTG*LDELRV
Trigger: AACACGGAGCTCGTCAAGTCACCCAGTGAGTACCTG...ACGACACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp GCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGTTAGTAATCAGGATCTTGATCTaGTCGGCCAGGGGCAGCGTG +
Preference number: 4 (lower is better)
Translates to: ALLLVPPFFLGLRFAGLVIRILI*SARGSV
Trigger: CACGCTGCCCCTGGCCGATCAGATCAAGATCCTGAT...TACTAACCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp CCACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTCTTCATCAGGATCTTaGTCTGATCGGCCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: PLHRAMPQVMRWSVPLALSSSGS*SDRPGA
Trigger: TGCCCCTGGCCGATCAGATCAAGATCCTGATGAAGA...CAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp GAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGTTAACTCCCAGCCTTTGTTaGTCCTCACCACGGCCATGT +
Preference number: 4 (lower is better)
Translates to: EALLLVPPFFLGLRFAGLTPSLC*SSPRPC
Trigger: ACATGGCCGTGGTGAGGATCAACAAAGGCTGGGAGT...TAACCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp ACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGACTCCCAGCCTTTGTTaGTCCTCACCACGGCCATGT +
Preference number: 4 (lower is better)
Translates to: TAPCNATGHEMVSSSCSVTPSLC*SSPRPC
Trigger: ACATGGCCGTGGTGAGGATCAACAAAGGCTGGGAGT...CACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp CTTAAGCTGACCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTAGCACAAACTGTCTCTaGAAGGTGGCCTCCACGAAG +
Preference number: 4 (lower is better)
Translates to: LKLTLRLAEDNPFCPLHRSTNCL*KVASTK
Trigger: CTTCGTGGAGGCCACCTTTCAGAGACAGTTTGTGCT...ACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGGTCAGCTTAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp GAGGCGCTTGAGTTCGCTCAGCGTGAGCACAAACTGTCTCTGAAAGGTGGCCTCTCTTCTCCACACTCTTaGGTCAACCGAGACTGGATC +
Preference number: 4 (lower is better)
Translates to: EALEFAQREHKLSLKGGLSSPHS*VNRDWI
Trigger: GATCCAGTCTCGGTTGACTCAAGAGTGTGGAGAAGA...GAGGCCACCTTTCAGAGACAGTTTGTGCTCACGCTGAGCGAACTCAAGCGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564750.5
CDS-3UTR TCA 90 bp GTCGAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGTCTTCTCCACACTCTTaGGTCAACCGAGACTGGATC +
Preference number: 4 (lower is better)
Translates to: VEALLLVPPFFLGLRFAGSSPHS*VNRDWI
Trigger: GATCCAGTCTCGGTTGACTCAAGAGTGTGGAGAAGA...CCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTCGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299853.10
ENST00000418581.6
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp CCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAATGCCACCCACCTCCTGTTTACTaGGATCTTCTCCACACTCTT +
Preference number: 4 (lower is better)
Translates to: PCDWLRIIPSVHCTVQCHPPPVY*DLLHTL
Trigger: AAGAGTGTGGAGAAGATCTCAGTAAACAGGAGGTGG...GTGGCATTGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299853.10
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp CGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGTCGTCTGTTGCTCTGTGTCGTCTaGAGCAAGTCGAGGCCCTAC +
Preference number: 4 (lower is better)
Translates to: RAMPQVMRWSVPLALCRLLLCVV*SKSRPY
Trigger: GTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAA...CAGACGACACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp ACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGTTGCTCTGTGTCGTCTaGAGCAAGTCGAGGCCCTAC +
Preference number: 4 (lower is better)
Translates to: TAPCNATGHEMVSSSCSVLLCVV*SKSRPY
Trigger: GTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAA...CACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp TCCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCAATGCCACAGGTCATaGGATGGTCAGTTCCTCTTG +
Preference number: 4 (lower is better)
Translates to: SSCSVSSEASRGPTSGSAQCHRS*DGQFLL
Trigger: CAAGAGGAACTGACCATCTCATGACCTGTGGCATTG...GGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp AAGCTGACCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCACAATGCCACAGGTCATaGGATGGTCAGTTCCTCTTG +
Preference number: 4 (lower is better)
Translates to: KLTLRLAEDNPFCPLHRAQCHRS*DGQFLL
Trigger: CAAGAGGAACTGACCATCTCATGACCTGTGGCATTG...TGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGGTCAGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp GCAGGTACTGACGCTCATGCTCAGAGCGACTGTCCCTCAGGCCATAGTAATGCACTAACTAACTTAAGCTaGCCCTGCGACTGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: AGTDAHAQSDCPSGHSNALTNLS*PCDWLR
Trigger: CCTCAGCCAGTCGCAGGGTCAGCTTAAGTTAGTTAG...TGCATTACTATGGCCTGAGGGACAGTCGCTCTGAGCATGAGCGTCAGTACCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564750.5
CDS-3UTR GCA 90 bp GAGTGGGGAAATAGCATAGACCGTCATTTAAACCTTCAGACAATTAGTGACTGTCAGTTACCCGCGGGCTaGAGAGACGGCGGCGGCCCG +
Preference number: 4 (lower is better)
Translates to: EWGNSIDRHLNLQTISDCQLPAG*RDGGGP
Trigger: CGGGCCGCCGCCGTCTCTGCAGCCCGCGGGTAACTG...ACAGTCACTAATTGTCTGAAGGTTTAAATGACGGTCTATGCTATTTCCCCACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp AAGCTGACCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAAGCTCTACCTTCTGCTaGTTGGGCTTGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: KLTLRLAEDNPFCPLHRASSTFC*LGLILA
Trigger: AGCCAAGATCAAGCCCAAGCAGCAGAAGGTAGAGCT...TGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGGTCAGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000564209.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CTTAAGCTGACCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTCAATCTGCTCCCCTTTaGTGCGGCAATAGTTGGGGT +
Preference number: 4 (lower is better)
Translates to: LKLTLRLAEDNPFCPLHRQSAPL*CGNSWG
Trigger: ACCCCAACTATTGCCGCAGCAAAGGGGAGCAGATTG...ACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGGTCAGCTTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp ACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGACGTTCAGCGCAATCTaGTCCCCTTTGCTGCGGCAA +
Preference number: 4 (lower is better)
Translates to: TAPCNATGHEMVSSSCSVTFSAI*SPLLRQ
Trigger: TTGCCGCAGCAAAGGGGAGCAGATTGCGCTGAACGT...CACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CCATTAGCTCCGTTCCCTCTAGATACACGTAACGCTGAGCCCAACAAGATCGCCACGTTCAGCGCAATCTaGTCCCCTTTGCTGCGGCAA +
Preference number: 4 (lower is better)
Translates to: PLAPFPLDTRNAEPNKIATFSAI*SPLLRQ
Trigger: TTGCCGCAGCAAAGGGGAGCAGATTGCGCTGAACGT...GGCGATCTTGTTGGGCTCAGCGTTACGTGTATCTAGAGGGAACGGAGCTAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAATGCCACAGGTCGAAGAGCAGAAGGTCTaGTTGTCCATCAGCTTCGAG +
Preference number: 4 (lower is better)
Translates to: RLAEDNPFCPLHRAMPQVEEQKV*LSISFE
Trigger: CTCGAAGCTGATGGACAAGCAGACCTTCTGCTCTTC...GACCTGTGGCATTGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCTTCGAAGAGCAGAAGGTCTaGTTGTCCATCAGCTTCGAG +
Preference number: 4 (lower is better)
Translates to: LALCRLKQVEALLLVPPFEEQKV*LSISFE
Trigger: CTCGAAGCTGATGGACAAGCAGACCTTCTGCTCTTC...GAAGGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp TGTCCACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTGCCGCAGCTGCAGGATaGCATGTAAAGGTGTCAGGT +
Preference number: 4 (lower is better)
Translates to: CPLHRAMPQVMRWSVPLAAAAAG*HVKVSG
Trigger: ACCTGACACCTTTACATGGCATCCTGCAGCTGCGGC...AGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGTGGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp ATCAGCATCATCAGGTACTCACTGGGTGACTTGACGAGCTCCGTGTTCTCCACCCAGGGCTCCTCTGCGTaGTTCTTCTGCAGGAACTCA +
Preference number: 4 (lower is better)
Translates to: ISIIRYSLGDLTSSVFSTQGSSA*FFCRNS
Trigger: TGAGTTCCTGCAGAAGAAGCACGCAGAGGAGCCCTG...GGTGGAGAACACGGAGCTCGTCAAGTCACCCAGTGAGTACCTGATGATGCTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564750.5
ENST00000565551.5
CDS-3UTR GCA 90 bp GTAACGCTGAGCCCAACAAGATCGCCTTCCTGTAACCATTTGAAGATAGCACCACGAAGTCTCGGCCCCTaGAGAGCACCTCAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: VTLSPTRSPSCNHLKIAPRSLGP*RAPQQA
Trigger: TGCCTGCTGAGGTGCTCTGCAGGGGCCGAGACTTCG...TGGTGCTATCTTCAAATGGTTACAGGAAGGCGATCTTGTTGGGCTCAGCGTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGTCGTACCACCCAGCGGCTCTaGGTGAACTTCCACATAACG +
Preference number: 4 (lower is better)
Translates to: HRAMPQVMRWSVPLALCRTTQRL*VNFHIT
Trigger: CGTTATGTGGAAGTTCACGCAGAGCCGCTGGGTGGT...ACGACACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTGAGTTTGGTCACGGTTaGCACCTCTTTCCTAACCAC +
Preference number: 4 (lower is better)
Translates to: RLKQVEALLLVPPFFLGLEFGHG*HLFPNH
Trigger: GTGGTTAGGAAAGAGGTGGCAACCGTGACCAAACTC...AAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCTTCGAGTTTGGTCACGGTTaGCACCTCTTTCCTAACCAC +
Preference number: 4 (lower is better)
Translates to: LALCRLKQVEALLLVPPFEFGHG*HLFPNH
Trigger: GTGGTTAGGAAAGAGGTGGCAACCGTGACCAAACTC...GAAGGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp GTCGAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGGAGTTTGGTCACGGTTaGCACCTCTTTCCTAACCAC +
Preference number: 4 (lower is better)
Translates to: VEALLLVPPFFLGLRFAGEFGHG*HLFPNH
Trigger: GTGGTTAGGAAAGAGGTGGCAACCGTGACCAAACTC...CCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTCGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGTCGTCTCACCACGGCCATGTaGTCCAGGAAGTCCTTCACA +
Preference number: 4 (lower is better)
Translates to: HRAMPQVMRWSVPLALCRLTTAM*SRKSFT
Trigger: TGTGAAGGACTTCCTGGAGCACATGGCCGTGGTGAG...ACGACACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp GTAACGCTGAGCCCAACAAGATCGCCTTCCTGTAACCATTTGAAGATAGCACCACCCGTCCACAGCATGTaGTGCCGCTGGACCACATCC +
Preference number: 4 (lower is better)
Translates to: VTLSPTRSPSCNHLKIAPPVHSM*CRWTTS
Trigger: GGATGTGGTCCAGCGGCAGCACATGCTGTGGACGGG...TGGTGCTATCTTCAAATGGTTACAGGAAGGCGATCTTGTTGGGCTCAGCGTTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp AGAAACTTTCAAAATTATGTACGTGACTCGCCTCTTTCTAGTGGACAGTGCTGCGCAGGCACCCGCAGCTaGTCCTTCCGCCGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: RNFQNYVRDSPLSSGQCCAGTRS*SFRRCS
Trigger: GCTGCAGCGGCGGAAGGAGCAGCTGCGGGTGCCTGC...GCAGCACTGTCCACTAGAAAGAGGCGAGTCACGTACATAATTTTGAAAGTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp GCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGTTAGTAGGCAGGCTGGCCAAGTaGAGATTGAAGAGGCGCTTG +
Preference number: 4 (lower is better)
Translates to: ALLLVPPFFLGLRFAGLVGRLAK*RLKRRL
Trigger: CAAGCGCCTCTTCAATCTGCACTTGGCCAGCCTGCC...TACTAACCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGTCGTCTGAGGGCAAACACCTTCTaGTCATCCGGGGAAGCAGCA +
Preference number: 4 (lower is better)
Translates to: RAMPQVMRWSVPLALCRLRANTF*SSGEAA
Trigger: TGCTGCTTCCCCGGATGAGCAGAAGGTGTTTGCCCT...CAGACGACACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp TGCCTCGTTGGCCGCCTCCCTCTCCCGGTGCTTGGCGTCAGCCTTATCCAGGTAGCTGGGTTAGTAGTTTaGTACTATTGTCAAGACTGT +
Preference number: 4 (lower is better)
Translates to: CLVGRLPLPVLGVSLIQVAGLVV*YYCQDC
Trigger: ACAGTCTTGACAATAGTAGCAAACTACTAACCCAGC...TACCTGGATAAGGCTGACGCCAAGCACCGGGAGAGGGAGGCGGCCAACGAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564750.5
CDS-3UTR GCA 90 bp CCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCATGGTCAGTTCCTCTTaGTCTGTGTCGTCTGAAGCA +
Preference number: 4 (lower is better)
Translates to: PLALCRLKQVEALLLVPPMVSSS*SVSSEA
Trigger: TGCTTCAGACGACACAGAGCAAGAGGAACTGACCAT...GGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CAGGTGGACCCAGGGCTCCTCTGCGTGCTTCTTCTGCAGGAACTCATAGGACTGATGGTCAGTTCCTCTTaGTCTGTGTCGTCTGAAGCA +
Preference number: 4 (lower is better)
Translates to: QVDPGLLCVLLLQELIGLMVSSS*SVSSEA
Trigger: TGCTTCAGACGACACAGAGCAAGAGGAACTGACCAT...CAGTCCTATGAGTTCCTGCAGAAGAAGCACGCAGAGGAGCCCTGGGTCCACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564750.5
CDS-3UTR GCA 90 bp GAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGTTACTGTCCACTGCACCGTaGAATGCCACAGGTCATGAG +
Preference number: 4 (lower is better)
Translates to: EALLLVPPFFLGLRFAGLLSTAP*NATGHE
Trigger: CTCATGACCTGTGGCATTGCACGGTGCAGTGGACAG...TAACCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGTCGTCTGATCCCTTCTGTCCACTaGACCGTGCAATGCCACAGG +
Preference number: 4 (lower is better)
Translates to: RAMPQVMRWSVPLALCRLIPSVH*TVQCHR
Trigger: CCTGTGGCATTGCACGGTGCAGTGGACAGAAGGGAT...CAGACGACACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGTCGTATCCCTTCTGTCCACTaGACCGTGCAATGCCACAGG +
Preference number: 4 (lower is better)
Translates to: HRAMPQVMRWSVPLALCRIPSVH*TVQCHR
Trigger: CCTGTGGCATTGCACGGTGCAGTGGACAGAAGGGAT...ACGACACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAATGCCACCTTTCTAGTGGACAGTaGTGCTCTGTCTTCCTCCAT +
Preference number: 4 (lower is better)
Translates to: PCDWLRIIPSVHCTVQCHLSSGQ*CSVFLH
Trigger: ATGGAGGAAGACAGAGCAGCACTGTCCACTAGAAAG...GTGGCATTGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAATGCCACAGGTCTCAAGCTCTACCTTCTaGTGCTTGGGCTTGATCTCC +
Preference number: 4 (lower is better)
Translates to: RLAEDNPFCPLHRAMPQVSSSTF*CLGLIS
Trigger: GGAGATCAAGCCCAAGCAGCAGAAGGTAGAGCTTGA...GACCTGTGGCATTGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418581.6
CDS-3UTR CCA 90 bp GTTCCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGGTAGGTCATCGAGGCTaGACGCACAGGGTACTGAAA +
Preference number: 4 (lower is better)
Translates to: VPLALCRLKQVEALLLVPVGHRG*THRVLK
Trigger: TTTCAGTACCCTGTGCGTCCAGCCTCGATGACCTAC...CGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGTCGTCTGTGCTGCGGCAATAGTTaGGGTTCAGGGTGTCGATGG +
Preference number: 4 (lower is better)
Translates to: RAMPQVMRWSVPLALCRLCCGNS*GSGCRW
Trigger: CCATCGACACCCTGAACCCCAACTATTGCCGCAGCA...CAGACGACACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp GTTCCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGGTGTTACTGGTGGTCTaGGAAGAGCAGAAGGTCTGC +
Preference number: 4 (lower is better)
Translates to: VPLALCRLKQVEALLLVPVLLVV*EEQKVC
Trigger: GCAGACCTTCTGCTCTTCCCAGACCACCAGTAACAC...CGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CCACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGGTGTTACTGGTGGTCTaGGAAGAGCAGAAGGTCTGC +
Preference number: 4 (lower is better)
Translates to: PLHRAMPQVMRWSVPLALVLLVV*EEQKVC
Trigger: GCAGACCTTCTGCTCTTCCCAGACCACCAGTAACAC...CAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGTGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp GCTCCGTTCCCTCTAGATACACGTAACGCTGAGCCCAACAAGATCGCCTTCCTGGTGTTACTGGTGGTCTaGGAAGAGCAGAAGGTCTGC +
Preference number: 4 (lower is better)
Translates to: APFPLDTRNAEPNKIAFLVLLVV*EEQKVC
Trigger: GCAGACCTTCTGCTCTTCCCAGACCACCAGTAACAC...CAGGAAGGCGATCTTGTTGGGCTCAGCGTTACGTGTATCTAGAGGGAACGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CTTAAGCTGACCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGGGATGTGTTACTGGTaGTCTGGGAAGAGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: LKLTLRLAEDNPFCPLHRGMCYW*SGKSRR
Trigger: CCTTCTGCTCTTCCCAGACCACCAGTAACACATCCC...ACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGGTCAGCTTAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAATGCCACAGGTCAACGGGATGTGTTACTaGTGGTCTGGGAAGAGCAGA +
Preference number: 4 (lower is better)
Translates to: RLAEDNPFCPLHRAMPQVNGMCY*WSGKSR
Trigger: TCTGCTCTTCCCAGACCACCAGTAACACATCCCGTT...GACCTGTGGCATTGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp ACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGCTCCTCCTGGCTGGGTaGCATCAGCATCATCAGGTA +
Preference number: 4 (lower is better)
Translates to: TAPCNATGHEMVSSSCSVLLLAG*HQHHQV
Trigger: TACCTGATGATGCTGATGCCACCCAGCCAGGAGGAG...CACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGTCGTCTGCTCCTCCTGGCTGGGTaGCATCAGCATCATCAGGTA +
Preference number: 4 (lower is better)
Translates to: RAMPQVMRWSVPLALCRLLLLAG*HQHHQV
Trigger: TACCTGATGATGCTGATGCCACCCAGCCAGGAGGAG...CAGACGACACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGTCGTCTGTCTCCTCCTCCTGGCTaGGTGGCATCAGCATCATCA +
Preference number: 4 (lower is better)
Translates to: RAMPQVMRWSVPLALCRLSPPPG*VASASS
Trigger: TGATGATGCTGATGCCACCCAGCCAGGAGGAGGAGA...CAGACGACACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGTCGTTCTTTCTCCTCCTCCTaGCTGGGTGGCATCAGCATC +
Preference number: 4 (lower is better)
Translates to: HRAMPQVMRWSVPLALCRSFSSS*LGGISI
Trigger: GATGCTGATGCCACCCAGCCAGGAGGAGGAGAAAGA...ACGACACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp ATCAGCATCATCAGGTACTCACTGGGTGACTTGACGAGCTCCGTGTTCTCCACCTCTTTCTCCTCCTCCTaGCTGGGTGGCATCAGCATC +
Preference number: 4 (lower is better)
Translates to: ISIIRYSLGDLTSSVFSTSFSSS*LGGISI
Trigger: GATGCTGATGCCACCCAGCCAGGAGGAGGAGAAAGA...GGTGGAGAACACGGAGCTCGTCAAGTCACCCAGTGAGTACCTGATGATGCTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564750.5
ENST00000565551.5
CDS-3UTR CCA 90 bp CGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGTCGTCTGTCTTTCTCCTCCTCCTaGCTGGGTGGCATCAGCATC +
Preference number: 4 (lower is better)
Translates to: RAMPQVMRWSVPLALCRLSFSSS*LGGISI
Trigger: GATGCTGATGCCACCCAGCCAGGAGGAGGAGAAAGA...CAGACGACACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp GAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGTTAACCACCCAGTTCCCTTaGACCAACATCGCCACCTTC +
Preference number: 4 (lower is better)
Translates to: EALLLVPPFFLGLRFAGLTTQFP*TNIATF
Trigger: GAAGGTGGCGATGTTGGTCCAAGGGAACTGGGTGGT...TAACCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CCACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGGGCTGGACGAGTCCTTaGGGTATAGGATGTCACTCT +
Preference number: 4 (lower is better)
Translates to: PLHRAMPQVMRWSVPLALGWTSP*GIGCHS
Trigger: AGAGTGACATCCTATACCCCAAGGACTCGTCCAGCC...CAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp GCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGTTAGTACCTCGGCGCAGAGTTTaGTCACGGTTGCCACCTCTT +
Preference number: 4 (lower is better)
Translates to: ALLLVPPFFLGLRFAGLVPRRRV*SRLPPL
Trigger: AAGAGGTGGCAACCGTGACCAAACTCTGCGCCGAGG...TACTAACCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAATGCCACAGGTCTTTTCCAGTTTGGCCTaGATACCCGTCCACAGCATG +
Preference number: 4 (lower is better)
Translates to: RLAEDNPFCPLHRAMPQVFSSLA*IPVHSM
Trigger: CATGCTGTGGACGGGTATCCAGGCCAAACTGGAAAA...GACCTGTGGCATTGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp GTTCCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGTTGGTTTTGGCTACTTaGATCCGCTGGTCCCCACAG +
Preference number: 4 (lower is better)
Translates to: VPLALCRLKQVEALLLVPLVLAT*IRWSPQ
Trigger: CTGTGGGGACCAGCGGATCCAAGTAGCCAAAACCAA...CGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CCACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGAACGCGTGGTTCTGCTaGGCCTTGGTTTTGGCTACT +
Preference number: 4 (lower is better)
Translates to: PLHRAMPQVMRWSVPLALNAWFC*ALVLAT
Trigger: AGTAGCCAAAACCAAGGCCCAGCAGAACCACGCGTT...CAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CTTAAGCTGACCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTACTGTCTCTGAAAGGTaGCCTCCACGAAGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: LKLTLRLAEDNPFCPLHRTVSER*PPRRPS
Trigger: TGAAGGCCTTCGTGGAGGCCACCTTTCAGAGACAGT...ACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGGTCAGCTTAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp GTTCCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGACTGTCTCTGAAAGGTaGCCTCCACGAAGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: VPLALCRLKQVEALLLVPTVSER*PPRRPS
Trigger: TGAAGGCCTTCGTGGAGGCCACCTTTCAGAGACAGT...CGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp GTCGAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGCCACAGGTCATGAGATaGTCAGTTCCTCTTGCTCTG +
Preference number: 4 (lower is better)
Translates to: VEALLLVPPFFLGLRFAGPQVMR*SVPLAL
Trigger: CAGAGCAAGAGGAACTGACCATCTCATGACCTGTGG...CCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTCGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAATGCCACAGGTCCCACAGGTCATGAGATaGTCAGTTCCTCTTGCTCTG +
Preference number: 4 (lower is better)
Translates to: RLAEDNPFCPLHRAMPQVPQVMR*SVPLAL
Trigger: CAGAGCAAGAGGAACTGACCATCTCATGACCTGTGG...GACCTGTGGCATTGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCTTCAAAGAAGGTCCCAGCTaGTCTCTTCTGGGAGTGATC +
Preference number: 4 (lower is better)
Translates to: LALCRLKQVEALLLVPPFKEGPS*SLLGVI
Trigger: GATCACTCCCAGAAGAGACCAGCTGGGACCTTCTTT...GAAGGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAATGCCACAGGTCAAAGAAGGTCCCAGCTaGTCTCTTCTGGGAGTGATC +
Preference number: 4 (lower is better)
Translates to: RLAEDNPFCPLHRAMPQVKEGPS*SLLGVI
Trigger: GATCACTCCCAGAAGAGACCAGCTGGGACCTTCTTT...GACCTGTGGCATTGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp GCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGTTAGTAGGGCTTGATCTTGGCTaGGAGGTGCGGAATGTCATC +
Preference number: 4 (lower is better)
Translates to: ALLLVPPFFLGLRFAGLVGLDLG*EVRNVI
Trigger: GATGACATTCCGCACCTCTCAGCCAAGATCAAGCCC...TACTAACCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp TTTCAAATTGTACTGCAAAGAAGGTCCCAGCTGGTCTCTTCTGGGAGTGATCTAGTTCTCCACCCCGCTTaGGCCGGGGCACAGCAGGTA +
Preference number: 4 (lower is better)
Translates to: FQIVLQRRSQLVSSGSDLVLHPA*AGAQQV
Trigger: TACCTGCTGTGCCCCGGCTCAAGCGGGGTGGAGAAC...TAGATCACTCCCAGAAGAGACCAGCTGGGACCTTCTTTGCAGTACAATTTGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp ACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGTCTTCATCAGGATCTTaGTCTGATCGGCCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: TAPCNATGHEMVSSSCSVSSSGS*SDRPGA
Trigger: TGCCCCTGGCCGATCAGATCAAGATCCTGATGAAGA...CACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp AGAAACTTTCAAAATTATGTACGTGACTCGCCTCTTTCTAGTGGACAGTGCTGCGCAGGCACGCCGCTGTaGGGGCTGGACGAGTCCTTG +
Preference number: 4 (lower is better)
Translates to: RNFQNYVRDSPLSSGQCCAGTPL*GLDESL
Trigger: CAAGGACTCGTCCAGCCCTCACAGCGGCGTGCCTGC...GCAGCACTGTCCACTAGAAAGAGGCGAGTCACGTACATAATTTTGAAAGTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp GCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGTTAGTAACTCCCAGCCTTTGTTaGTCCTCACCACGGCCATGT +
Preference number: 4 (lower is better)
Translates to: ALLLVPPFFLGLRFAGLVTPSLC*SSPRPC
Trigger: ACATGGCCGTGGTGAGGATCAACAAAGGCTGGGAGT...TACTAACCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp CCATTAGCTCCGTTCCCTCTAGATACACGTAACGCTGAGCCCAACAAGATCGCCAGCACAAACTGTCTCTaGAAGGTGGCCTCCACGAAG +
Preference number: 4 (lower is better)
Translates to: PLAPFPLDTRNAEPNKIASTNCL*KVASTK
Trigger: CTTCGTGGAGGCCACCTTTCAGAGACAGTTTGTGCT...GGCGATCTTGTTGGGCTCAGCGTTACGTGTATCTAGAGGGAACGGAGCTAATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp TGTCCACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTAGCACAAACTGTCTCTaGAAGGTGGCCTCCACGAAG +
Preference number: 4 (lower is better)
Translates to: CPLHRAMPQVMRWSVPLASTNCL*KVASTK
Trigger: CTTCGTGGAGGCCACCTTTCAGAGACAGTTTGTGCT...AGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGTGGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp CACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGTCGTAGCACAAACTGTCTCTaGAAGGTGGCCTCCACGAAG +
Preference number: 4 (lower is better)
Translates to: HRAMPQVMRWSVPLALCRSTNCL*KVASTK
Trigger: CTTCGTGGAGGCCACCTTTCAGAGACAGTTTGTGCT...ACGACACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp CTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCTTCAAAACCTGTCGATGCTaGTCACTCATGTCTCCAGAC +
Preference number: 4 (lower is better)
Translates to: LALCRLKQVEALLLVPPFKTCRC*SLMSPD
Trigger: GTCTGGAGACATGAGTGATCAGCATCGACAGGTTTT...GAAGGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299853.10
ENST00000418581.6
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp CGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTCCACCTCCTGTTTACTaGGATCTTCTCCACACTCTT +
Preference number: 4 (lower is better)
Translates to: RLKQVEALLLVPPFFLGLPPPVY*DLLHTL
Trigger: AAGAGTGTGGAGAAGATCTCAGTAAACAGGAGGTGG...AAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299853.10
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp CAGGAAGTCCTTCACATCCTCGGCGCAGAGTTTGGTCACGGTTGCCACCTCTTTCAATGCCACAGGTCATaGGATGGTCAGTTCCTCTTG +
Preference number: 4 (lower is better)
Translates to: QEVLHILGAEFGHGCHLFQCHRS*DGQFLL
Trigger: CAAGAGGAACTGACCATCTCATGACCTGTGGCATTG...AAAGAGGTGGCAACCGTGACCAAACTCTGCGCCGAGGATGTGAAGGACTTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564750.5
CDS-3UTR TCA 90 bp CCACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGCAATGCCACAGGTCATaGGATGGTCAGTTCCTCTTG +
Preference number: 4 (lower is better)
Translates to: PLHRAMPQVMRWSVPLALQCHRS*DGQFLL
Trigger: CAAGAGGAACTGACCATCTCATGACCTGTGGCATTG...CAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGTGG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp CACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGTCGTCTAACTAACTTAAGCTaGCCCTGCGACTGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: HRAMPQVMRWSVPLALCRLTNLS*PCDWLR
Trigger: CCTCAGCCAGTCGCAGGGTCAGCTTAAGTTAGTTAG...ACGACACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp CGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGTCGTCTGCTAACTAACTTAAGCTaGCCCTGCGACTGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: RAMPQVMRWSVPLALCRLLTNLS*PCDWLR
Trigger: CCTCAGCCAGTCGCAGGGTCAGCTTAAGTTAGTTAG...CAGACGACACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CAAAATTATGTACGTGACTCGCCTCTTTCTAGTGGACAGTGCTGCTCTGTCTTCAGGCGGCGGCCATGTTaGTGGTGGAGAAACTCCGGC +
Preference number: 4 (lower is better)
Translates to: QNYVRDSPLSSGQCCSVFRRRPC*WWRNSG
Trigger: GCCGGAGTTTCTCCACCAGCAACATGGCCGCCGCCT...GAAGACAGAGCAGCACTGTCCACTAGAAAGAGGCGAGTCACGTACATAATTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CCACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGAGCTCTACCTTCTGCTaGTTGGGCTTGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: PLHRAMPQVMRWSVPLALSSTFC*LGLILA
Trigger: AGCCAAGATCAAGCCCAAGCAGCAGAAGGTAGAGCT...CAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000564209.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAATGCCACAGGTCTCAAGCTCTACCTTCTaGTGCTTGGGCTTGATCTTG +
Preference number: 4 (lower is better)
Translates to: RLAEDNPFCPLHRAMPQVSSSTF*CLGLIL
Trigger: CAAGATCAAGCCCAAGCAGCAGAAGGTAGAGCTTGA...GACCTGTGGCATTGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000564209.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CCATTAGCTCCGTTCCCTCTAGATACACGTAACGCTGAGCCCAACAAGATCGCCTCTGCTCCCCTTTGCTaGGGCAATAGTTGGGGTTCA +
Preference number: 4 (lower is better)
Translates to: PLAPFPLDTRNAEPNKIASAPLC*GNSWGS
Trigger: TGAACCCCAACTATTGCCGCAGCAAAGGGGAGCAGA...GGCGATCTTGTTGGGCTCAGCGTTACGTGTATCTAGAGGGAACGGAGCTAATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp GAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGTTACAATCTGCTCCCCTTTaGTGCGGCAATAGTTGGGGT +
Preference number: 4 (lower is better)
Translates to: EALLLVPPFFLGLRFAGLQSAPL*CGNSWG
Trigger: ACCCCAACTATTGCCGCAGCAAAGGGGAGCAGATTG...TAACCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp GCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGTTAGTAACGTTCAGCGCAATCTaGTCCCCTTTGCTGCGGCAA +
Preference number: 4 (lower is better)
Translates to: ALLLVPPFFLGLRFAGLVTFSAI*SPLLRQ
Trigger: TTGCCGCAGCAAAGGGGAGCAGATTGCGCTGAACGT...TACTAACCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp GTTCCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGGAAGAGCAGAAGGTCTaGTTGTCCATCAGCTTCGAG +
Preference number: 4 (lower is better)
Translates to: VPLALCRLKQVEALLLVPEEQKV*LSISFE
Trigger: CTCGAAGCTGATGGACAAGCAGACCTTCTGCTCTTC...CGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGTCGTACCTTGCCTGTAGAGTaGAGCGGCATAACGGGATGT +
Preference number: 4 (lower is better)
Translates to: HRAMPQVMRWSVPLALCRTLPVE*SGITGC
Trigger: ACATCCCGTTATGCCGCTGCACTCTACAGGCAAGGT...ACGACACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp GCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGTTAGTACAGGGCTCCTCTGCGTaGTTCTTCTGCAGGAACTCA +
Preference number: 4 (lower is better)
Translates to: ALLLVPPFFLGLRFAGLVQGSSA*FFCRNS
Trigger: TGAGTTCCTGCAGAAGAAGCACGCAGAGGAGCCCTG...TACTAACCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CAAAATTATGTACGTGACTCGCCTCTTTCTAGTGGACAGTGCTGCTCTGTCTTCCGAAGTCTCGGCCCCTaGAGAGCACCTCAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: QNYVRDSPLSSGQCCSVFRSLGP*RAPQQA
Trigger: TGCCTGCTGAGGTGCTCTGCAGGGGCCGAGACTTCG...GAAGACAGAGCAGCACTGTCCACTAGAAAGAGGCGAGTCACGTACATAATTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp GTTCCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGGAGTTTGGTCACGGTTaGCACCTCTTTCCTAACCAC +
Preference number: 4 (lower is better)
Translates to: VPLALCRLKQVEALLLVPEFGHG*HLFPNH
Trigger: GTGGTTAGGAAAGAGGTGGCAACCGTGACCAAACTC...CGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGTCGTCTGTGGACCACATCCGGGTaGTTCTTGATGAACTCCCCA +
Preference number: 4 (lower is better)
Translates to: RAMPQVMRWSVPLALCRLWTTSG*FLMNSP
Trigger: TGGGGAGTTCATCAAGAAGCACCCGGATGTGGTCCA...CAGACGACACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp ACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGTGGACCACATCCGGGTaGTTCTTGATGAACTCCCCA +
Preference number: 4 (lower is better)
Translates to: TAPCNATGHEMVSSSCSVWTTSG*FLMNSP
Trigger: TGGGGAGTTCATCAAGAAGCACCCGGATGTGGTCCA...CACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp GAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGTTATGGACCACATCCGGGTaGTTCTTGATGAACTCCCCA +
Preference number: 4 (lower is better)
Translates to: EALLLVPPFFLGLRFAGLWTTSG*FLMNSP
Trigger: TGGGGAGTTCATCAAGAAGCACCCGGATGTGGTCCA...TAACCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CAAATTGTACTGCAAAGAAGGTCCCAGCTGGTCTCTTCTGGGAGTGATCTAACTGTCCACAGCATGTGCTaGCGCTGGACCACATCCGGG +
Preference number: 4 (lower is better)
Translates to: QIVLQRRSQLVSSGSDLTVHSMC*RWTTSG
Trigger: CCCGGATGTGGTCCAGCGGCAGCACATGCTGTGGAC...AGTTAGATCACTCCCAGAAGAGACCAGCTGGGACCTTCTTTGCAGTACAATTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp TTTCAAATTGTACTGCAAAGAAGGTCCCAGCTGGTCTCTTCTGGGAGTGATCTACAGCCCTGGGGCGGGTaGCCGTTGAAGCTGTCTGTG +
Preference number: 4 (lower is better)
Translates to: FQIVLQRRSQLVSSGSDLQPWGG*PLKLSV
Trigger: CACAGACAGCTTCAACGGGCACCCGCCCCAGGGCTG...TAGATCACTCCCAGAAGAGACCAGCTGGGACCTTCTTTGCAGTACAATTTGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp GCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGTTAGTAAGGGCAAACACCTTCTaGTCATCCGGGGAAGCAGCA +
Preference number: 4 (lower is better)
Translates to: ALLLVPPFFLGLRFAGLVRANTF*SSGEAA
Trigger: TGCTGCTTCCCCGGATGAGCAGAAGGTGTTTGCCCT...TACTAACCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp GCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGTTAGTACTGTCCACTGCACCGTaGAATGCCACAGGTCATGAG +
Preference number: 4 (lower is better)
Translates to: ALLLVPPFFLGLRFAGLVLSTAP*NATGHE
Trigger: CTCATGACCTGTGGCATTGCACGGTGCAGTGGACAG...TACTAACCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp TCCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCGATCTCCTGTACAACTaGGTCATCCTCTTCATTGGC +
Preference number: 4 (lower is better)
Translates to: SSCSVSSEASRGPTSGSADLLYN*VILFIG
Trigger: GCCAATGAAGAGGATGACCCAGTTGTACAGGAGATC...GGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp TGTCCACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTGTAGGTCATCGAGGCTaGACGCACAGGGTACTGAAA +
Preference number: 4 (lower is better)
Translates to: CPLHRAMPQVMRWSVPLAVGHRG*THRVLK
Trigger: TTTCAGTACCCTGTGCGTCCAGCCTCGATGACCTAC...AGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGTGGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp ATCAGCATCATCAGGTACTCACTGGGTGACTTGACGAGCTCCGTGTTCTCCACCGTAGGTCATCGAGGCTaGACGCACAGGGTACTGAAA +
Preference number: 4 (lower is better)
Translates to: ISIIRYSLGDLTSSVFSTVGHRG*THRVLK
Trigger: TTTCAGTACCCTGTGCGTCCAGCCTCGATGACCTAC...GGTGGAGAACACGGAGCTCGTCAAGTCACCCAGTGAGTACCTGATGATGCTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564750.5
CDS-3UTR CCA 90 bp CGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGTCGTCTGGGTTCAGGGTGTCGATaGCCATCTCAAGCTCTACCT +
Preference number: 4 (lower is better)
Translates to: RAMPQVMRWSVPLALCRLGSGCR*PSQALP
Trigger: AGGTAGAGCTTGAGATGGCCATCGACACCCTGAACC...CAGACGACACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp TGTCCACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTGGTTCAGGGTGTCGATaGCCATCTCAAGCTCTACCT +
Preference number: 4 (lower is better)
Translates to: CPLHRAMPQVMRWSVPLAGSGCR*PSQALP
Trigger: AGGTAGAGCTTGAGATGGCCATCGACACCCTGAACC...AGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGTGGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp GCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGTTAGTATGCTGCGGCAATAGTTaGGGTTCAGGGTGTCGATGG +
Preference number: 4 (lower is better)
Translates to: ALLLVPPFFLGLRFAGLVCCGNS*GSGCRW
Trigger: CCATCGACACCCTGAACCCCAACTATTGCCGCAGCA...TACTAACCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp ACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGGTGTTACTGGTGGTCTaGGAAGAGCAGAAGGTCTGC +
Preference number: 4 (lower is better)
Translates to: TAPCNATGHEMVSSSCSVVLLVV*EEQKVC
Trigger: GCAGACCTTCTGCTCTTCCCAGACCACCAGTAACAC...CACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CCATTAGCTCCGTTCCCTCTAGATACACGTAACGCTGAGCCCAACAAGATCGCCGTGTTACTGGTGGTCTaGGAAGAGCAGAAGGTCTGC +
Preference number: 4 (lower is better)
Translates to: PLAPFPLDTRNAEPNKIAVLLVV*EEQKVC
Trigger: GCAGACCTTCTGCTCTTCCCAGACCACCAGTAACAC...GGCGATCTTGTTGGGCTCAGCGTTACGTGTATCTAGAGGGAACGGAGCTAATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp GAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGTTAGGGATGTGTTACTGGTaGTCTGGGAAGAGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: EALLLVPPFFLGLRFAGLGMCYW*SGKSRR
Trigger: CCTTCTGCTCTTCCCAGACCACCAGTAACACATCCC...TAACCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CTTAAGCTGACCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTAACGGGATGTGTTACTaGTGGTCTGGGAAGAGCAGA +
Preference number: 4 (lower is better)
Translates to: LKLTLRLAEDNPFCPLHRNGMCY*WSGKSR
Trigger: TCTGCTCTTCCCAGACCACCAGTAACACATCCCGTT...ACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGGTCAGCTTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp GCTCCGTTCCCTCTAGATACACGTAACGCTGAGCCCAACAAGATCGCCTTCCTGAACGGGATGTGTTACTaGTGGTCTGGGAAGAGCAGA +
Preference number: 4 (lower is better)
Translates to: APFPLDTRNAEPNKIAFLNGMCY*WSGKSR
Trigger: TCTGCTCTTCCCAGACCACCAGTAACACATCCCGTT...CAGGAAGGCGATCTTGTTGGGCTCAGCGTTACGTGTATCTAGAGGGAACGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp GTAACGCTGAGCCCAACAAGATCGCCTTCCTGTAACCATTTGAAGATAGCACCACCCTCTCCCGGTGCTTaGCGTCAGCCTTATCCAGGT +
Preference number: 4 (lower is better)
Translates to: VTLSPTRSPSCNHLKIAPPSPGA*RQPYPG
Trigger: ACCTGGATAAGGCTGACGCCAAGCACCGGGAGAGGG...TGGTGCTATCTTCAAATGGTTACAGGAAGGCGATCTTGTTGGGCTCAGCGTTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp GCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGTTAGTATCTTTCTCCTCCTCCTaGCTGGGTGGCATCAGCATC +
Preference number: 4 (lower is better)
Translates to: ALLLVPPFFLGLRFAGLVSFSSS*LGGISI
Trigger: GATGCTGATGCCACCCAGCCAGGAGGAGGAGAAAGA...TACTAACCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CGGGTGCTTCTTGATGAACTCCCCATCATAAGGCAGAATGAACTCCCAGCCTTTAACATCGCCACCTTCTaGATGCCCCGCAGAACAGCC +
Preference number: 4 (lower is better)
Translates to: RVLLDELPIIRQNELPAFNIATF*MPRRTA
Trigger: GGCTGTTCTGCGGGGCATCCAGAAGGTGGCGATGTT...AAAGGCTGGGAGTTCATTCTGCCTTATGATGGGGAGTTCATCAAGAAGCACCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564750.5
CDS-3UTR CCA 90 bp GCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGTTAGTAACCACCCAGTTCCCTTaGACCAACATCGCCACCTTC +
Preference number: 4 (lower is better)
Translates to: ALLLVPPFFLGLRFAGLVTTQFP*TNIATF
Trigger: GAAGGTGGCGATGTTGGTCCAAGGGAACTGGGTGGT...TACTAACCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp GAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGTTAGGCTGGACGAGTCCTTaGGGTATAGGATGTCACTCT +
Preference number: 4 (lower is better)
Translates to: EALLLVPPFFLGLRFAGLGWTSP*GIGCHS
Trigger: AGAGTGACATCCTATACCCCAAGGACTCGTCCAGCC...TAACCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGTCGTGGCTGGACGAGTCCTTaGGGTATAGGATGTCACTCT +
Preference number: 4 (lower is better)
Translates to: HRAMPQVMRWSVPLALCRGWTSP*GIGCHS
Trigger: AGAGTGACATCCTATACCCCAAGGACTCGTCCAGCC...ACGACACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp GTTCCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGTTTTCCAGTTTGGCCTaGATACCCGTCCACAGCATG +
Preference number: 4 (lower is better)
Translates to: VPLALCRLKQVEALLLVPFSSLA*IPVHSM
Trigger: CATGCTGTGGACGGGTATCCAGGCCAAACTGGAAAA...CGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CCACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTTTTCCAGTTTGGCCTaGATACCCGTCCACAGCATG +
Preference number: 4 (lower is better)
Translates to: PLHRAMPQVMRWSVPLALFSSLA*IPVHSM
Trigger: CATGCTGTGGACGGGTATCCAGGCCAAACTGGAAAA...CAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp GCTCCGTTCCCTCTAGATACACGTAACGCTGAGCCCAACAAGATCGCCTTCCTGTTTTCCAGTTTGGCCTaGATACCCGTCCACAGCATG +
Preference number: 4 (lower is better)
Translates to: APFPLDTRNAEPNKIAFLFSSLA*IPVHSM
Trigger: CATGCTGTGGACGGGTATCCAGGCCAAACTGGAAAA...CAGGAAGGCGATCTTGTTGGGCTCAGCGTTACGTGTATCTAGAGGGAACGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCTTCAGACTTTTTCCAGTTTaGCCTGGATACCCGTCCACA +
Preference number: 4 (lower is better)
Translates to: LALCRLKQVEALLLVPPFRLFPV*PGYPST
Trigger: TGTGGACGGGTATCCAGGCCAAACTGGAAAAAGTCT...GAAGGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp GTCGAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGAGACTTTTTCCAGTTTaGCCTGGATACCCGTCCACA +
Preference number: 4 (lower is better)
Translates to: VEALLLVPPFFLGLRFAGRLFPV*PGYPST
Trigger: TGTGGACGGGTATCCAGGCCAAACTGGAAAAAGTCT...CCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTCGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp AAGCTGACCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAAGACTTTTTCCAGTTTaGCCTGGATACCCGTCCACA +
Preference number: 4 (lower is better)
Translates to: KLTLRLAEDNPFCPLHRARLFPV*PGYPST
Trigger: TGTGGACGGGTATCCAGGCCAAACTGGAAAAAGTCT...TGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGGTCAGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCTGCATCCGGCTTCTTTaGCATGGTTTCCTTTACAAG +
Preference number: 4 (lower is better)
Translates to: PLALCRLKQVEALLLVPPCIRLL*HGFLYK
Trigger: CTTGTAAAGGAAACCATGCCAAAGAAGCCGGATGCA...GGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp TGTCCACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTTTGGTTTTGGCTACTTaGATCCGCTGGTCCCCACAG +
Preference number: 4 (lower is better)
Translates to: CPLHRAMPQVMRWSVPLALVLAT*IRWSPQ
Trigger: CTGTGGGGACCAGCGGATCCAAGTAGCCAAAACCAA...AGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGTGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGTCGTTTGGTTTTGGCTACTTaGATCCGCTGGTCCCCACAG +
Preference number: 4 (lower is better)
Translates to: HRAMPQVMRWSVPLALCRLVLAT*IRWSPQ
Trigger: CTGTGGGGACCAGCGGATCCAAGTAGCCAAAACCAA...ACGACACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp ACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGTTGGTTTTGGCTACTTaGATCCGCTGGTCCCCACAG +
Preference number: 4 (lower is better)
Translates to: TAPCNATGHEMVSSSCSVLVLAT*IRWSPQ
Trigger: CTGTGGGGACCAGCGGATCCAAGTAGCCAAAACCAA...CACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGTCGTGGTTCTGCTGGGCCTTaGTTTTGGCTACTTGGATCC +
Preference number: 4 (lower is better)
Translates to: HRAMPQVMRWSVPLALCRGSAGP*FWLLGS
Trigger: GGATCCAAGTAGCCAAAACCAAGGCCCAGCAGAACC...ACGACACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp GAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGTTAAACGCGTGGTTCTGCTaGGCCTTGGTTTTGGCTACT +
Preference number: 4 (lower is better)
Translates to: EALLLVPPFFLGLRFAGLNAWFC*ALVLAT
Trigger: AGTAGCCAAAACCAAGGCCCAGCAGAACCACGCGTT...TAACCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp TGTCCACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTAACGCGTGGTTCTGCTaGGCCTTGGTTTTGGCTACT +
Preference number: 4 (lower is better)
Translates to: CPLHRAMPQVMRWSVPLANAWFC*ALVLAT
Trigger: AGTAGCCAAAACCAAGGCCCAGCAGAACCACGCGTT...AGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGTGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CAAATTGTACTGCAAAGAAGGTCCCAGCTGGTCTCTTCTGGGAGTGATCTAACTTTGGCCAGCTTGCTGTaGAGGCCGCTGGGGGAAGTG +
Preference number: 4 (lower is better)
Translates to: QIVLQRRSQLVSSGSDLTLASLL*RPLGEV
Trigger: CACTTCCCCCAGCGGCCTCCACAGCAAGCTGGCCAA...AGTTAGATCACTCCCAGAAGAGACCAGCTGGGACCTTCTTTGCAGTACAATTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp ACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGACTGTCTCTGAAAGGTaGCCTCCACGAAGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: TAPCNATGHEMVSSSCSVTVSER*PPRRPS
Trigger: TGAAGGCCTTCGTGGAGGCCACCTTTCAGAGACAGT...CACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CCACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGCCACAGGTCATGAGATaGTCAGTTCCTCTTGCTCTG +
Preference number: 4 (lower is better)
Translates to: PLHRAMPQVMRWSVPLALPQVMR*SVPLAL
Trigger: CAGAGCAAGAGGAACTGACCATCTCATGACCTGTGG...CAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGTGG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp GTTCCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCACAGGTCATGAGATaGTCAGTTCCTCTTGCTCTG +
Preference number: 4 (lower is better)
Translates to: VPLALCRLKQVEALLLVPPQVMR*SVPLAL
Trigger: CAGAGCAAGAGGAACTGACCATCTCATGACCTGTGG...CGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp GTCCTTCACATCCTCGGCGCAGAGTTTGGTCACGGTTGCCACCTCTTTCCTAACAAAGAAGGTCCCAGCTaGTCTCTTCTGGGAGTGATC +
Preference number: 4 (lower is better)
Translates to: VLHILGAEFGHGCHLFPNKEGPS*SLLGVI
Trigger: GATCACTCCCAGAAGAGACCAGCTGGGACCTTCTTT...GTTAGGAAAGAGGTGGCAACCGTGACCAAACTCTGCGCCGAGGATGTGAAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564750.5
3UTR CAA 72 bp ACGGAATCGATGGAGGGGCCCAGGAGGCTCATCAAGTaGGCAAAAGGCATGACCTTCACATTCTTCATCAGG +
Preference number: 4 (lower is better)
Translates to: TESMEGPRRLIK*AKGMTFTFFIR
Trigger: CCTGATGAAGAATGTGAAGGTCATGCCTTTTGCCAACTTGATGAGCCTCCTGGGCCCCTCCATCGATTCCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564750.5
CDS-3UTR TCA 90 bp CCACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGGGACGCACAGGGTACTaGAATAGATACAGCTTTTCC +
Preference number: 4 (lower is better)
Translates to: PLHRAMPQVMRWSVPLALGRTGY*NRYSFS
Trigger: GGAAAAGCTGTATCTATTTCAGTACCCTGTGCGTCC...CAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp AGAAACTTTCAAAATTATGTACGTGACTCGCCTCTTTCTAGTGGACAGTGCTGCGTTCTCCACCCCGCTTaGGCCGGGGCACAGCAGGTA +
Preference number: 4 (lower is better)
Translates to: RNFQNYVRDSPLSSGQCCVLHPA*AGAQQV
Trigger: TACCTGCTGTGCCCCGGCTCAAGCGGGGTGGAGAAC...GCAGCACTGTCCACTAGAAAGAGGCGAGTCACGTACATAATTTTGAAAGTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp GTAACGCTGAGCCCAACAAGATCGCCTTCCTGTAACCATTTGAAGATAGCACCAATCAGGATCTTGATCTaGTCGGCCAGGGGCAGCGTG +
Preference number: 4 (lower is better)
Translates to: VTLSPTRSPSCNHLKIAPIRILI*SARGSV
Trigger: CACGCTGCCCCTGGCCGATCAGATCAAGATCCTGAT...TGGTGCTATCTTCAAATGGTTACAGGAAGGCGATCTTGTTGGGCTCAGCGTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp TTCACCACCCAGTTCCCTTGGACCAACATCGCCACCTTCTGGATGCCCCGCAGAAGTTGGCAAAAGGCATaGCCTTCACATTCTTCATCA +
Preference number: 4 (lower is better)
Translates to: FTTQFPWTNIATFWMPRRSWQKA*PSHSSS
Trigger: TGATGAAGAATGTGAAGGTCATGCCTTTTGCCAACT...TCTGCGGGGCATCCAGAAGGTGGCGATGTTGGTCCAAGGGAACTGGGTGGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564750.5
CDS-3UTR TCA 90 bp GTTCCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGAAAACCTGTCGATGCTaGTCACTCATGTCTCCAGAC +
Preference number: 4 (lower is better)
Translates to: VPLALCRLKQVEALLLVPKTCRC*SLMSPD
Trigger: GTCTGGAGACATGAGTGATCAGCATCGACAGGTTTT...CGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299853.10
ENST00000418581.6
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp ACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGTCTTCTCCACACTCTTaGGTCAACCGAGACTGGATC +
Preference number: 4 (lower is better)
Translates to: TAPCNATGHEMVSSSCSVSSPHS*VNRDWI
Trigger: GATCCAGTCTCGGTTGACTCAAGAGTGTGGAGAAGA...CACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299853.10
ENST00000418581.6
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp CGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGTCGTCTGTCTTCTCCACACTCTTaGGTCAACCGAGACTGGATC +
Preference number: 4 (lower is better)
Translates to: RAMPQVMRWSVPLALCRLSSPHS*VNRDWI
Trigger: GATCCAGTCTCGGTTGACTCAAGAGTGTGGAGAAGA...CAGACGACACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299853.10
ENST00000418581.6
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp GGTACTGACGCTCATGCTCAGAGCGACTGTCCCTCAGGCCATAGTAATGCAGGTCCACCTCCTGTTTACTaGGATCTTCTCCACACTCTT +
Preference number: 4 (lower is better)
Translates to: GTDAHAQSDCPSGHSNAGPPPVY*DLLHTL
Trigger: AAGAGTGTGGAGAAGATCTCAGTAAACAGGAGGTGG...ACCTGCATTACTATGGCCTGAGGGACAGTCGCTCTGAGCATGAGCGTCAGTACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564750.5
CDS-3UTR TCA 90 bp CCACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGCCACCTCCTGTTTACTaGGATCTTCTCCACACTCTT +
Preference number: 4 (lower is better)
Translates to: PLHRAMPQVMRWSVPLALPPPVY*DLLHTL
Trigger: AAGAGTGTGGAGAAGATCTCAGTAAACAGGAGGTGG...CAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299853.10
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp ACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGCAATGCCACAGGTCATaGGATGGTCAGTTCCTCTTG +
Preference number: 4 (lower is better)
Translates to: TAPCNATGHEMVSSSCSVQCHRS*DGQFLL
Trigger: CAAGAGGAACTGACCATCTCATGACCTGTGGCATTG...CACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp CACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGTCGTCAATGCCACAGGTCATaGGATGGTCAGTTCCTCTTG +
Preference number: 4 (lower is better)
Translates to: HRAMPQVMRWSVPLALCRQCHRS*DGQFLL
Trigger: CAAGAGGAACTGACCATCTCATGACCTGTGGCATTG...ACGACACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp CCATTAGCTCCGTTCCCTCTAGATACACGTAACGCTGAGCCCAACAAGATCGCCCAATGCCACAGGTCATaGGATGGTCAGTTCCTCTTG +
Preference number: 4 (lower is better)
Translates to: PLAPFPLDTRNAEPNKIAQCHRS*DGQFLL
Trigger: CAAGAGGAACTGACCATCTCATGACCTGTGGCATTG...GGCGATCTTGTTGGGCTCAGCGTTACGTGTATCTAGAGGGAACGGAGCTAATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp TGTCCACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTAGCTCTACCTTCTGCTaGTTGGGCTTGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: CPLHRAMPQVMRWSVPLASSTFC*LGLILA
Trigger: AGCCAAGATCAAGCCCAAGCAGCAGAAGGTAGAGCT...AGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGTGGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000564209.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp ACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGAGCTCTACCTTCTGCTaGTTGGGCTTGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: TAPCNATGHEMVSSSCSVSSTFC*LGLILA
Trigger: AGCCAAGATCAAGCCCAAGCAGCAGAAGGTAGAGCT...CACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000564209.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp GCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGTTAGTACAATCTGCTCCCCTTTaGTGCGGCAATAGTTGGGGT +
Preference number: 4 (lower is better)
Translates to: ALLLVPPFFLGLRFAGLVQSAPL*CGNSWG
Trigger: ACCCCAACTATTGCCGCAGCAAAGGGGAGCAGATTG...TACTAACCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGTCGTCTGGAAGAGCAGAAGGTCTaGTTGTCCATCAGCTTCGAG +
Preference number: 4 (lower is better)
Translates to: RAMPQVMRWSVPLALCRLEEQKV*LSISFE
Trigger: CTCGAAGCTGATGGACAAGCAGACCTTCTGCTCTTC...CAGACGACACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp ACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGGAAGAGCAGAAGGTCTaGTTGTCCATCAGCTTCGAG +
Preference number: 4 (lower is better)
Translates to: TAPCNATGHEMVSSSCSVEEQKV*LSISFE
Trigger: CTCGAAGCTGATGGACAAGCAGACCTTCTGCTCTTC...CACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CCGCTGGACCACATCCGGGTGCTTCTTGATGAACTCCCCATCATAAGGCAGAATGAAGAGCAGAAGGTCTaGTTGTCCATCAGCTTCGAG +
Preference number: 4 (lower is better)
Translates to: PLDHIRVLLDELPIIRQNEEQKV*LSISFE
Trigger: CTCGAAGCTGATGGACAAGCAGACCTTCTGCTCTTC...ATTCTGCCTTATGATGGGGAGTTCATCAAGAAGCACCCGGATGTGGTCCAGCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564750.5
CDS-3UTR GCA 90 bp CAAAATTATGTACGTGACTCGCCTCTTTCTAGTGGACAGTGCTGCTCTGTCTTCCCATCGACAGGACGTTaGTGGGGGCCACAGGCTTGT +
Preference number: 4 (lower is better)
Translates to: QNYVRDSPLSSGQCCSVFPSTGR*WGPQAC
Trigger: ACAAGCCTGTGGCCCCCAGCAACGTCCTGTCGATGG...GAAGACAGAGCAGCACTGTCCACTAGAAAGAGGCGAGTCACGTACATAATTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGTCGTCTGGAGTTTGGTCACGGTTaGCACCTCTTTCCTAACCAC +
Preference number: 4 (lower is better)
Translates to: RAMPQVMRWSVPLALCRLEFGHG*HLFPNH
Trigger: GTGGTTAGGAAAGAGGTGGCAACCGTGACCAAACTC...CAGACGACACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp TGTCCACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTGAGTTTGGTCACGGTTaGCACCTCTTTCCTAACCAC +
Preference number: 4 (lower is better)
Translates to: CPLHRAMPQVMRWSVPLAEFGHG*HLFPNH
Trigger: GTGGTTAGGAAAGAGGTGGCAACCGTGACCAAACTC...AGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGTGGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp TTTCAAATTGTACTGCAAAGAAGGTCCCAGCTGGTCTCTTCTGGGAGTGATCTAGTCCACAGCATGTGCTaGCGCTGGACCACATCCGGG +
Preference number: 4 (lower is better)
Translates to: FQIVLQRRSQLVSSGSDLVHSMC*RWTTSG
Trigger: CCCGGATGTGGTCCAGCGGCAGCACATGCTGTGGAC...TAGATCACTCCCAGAAGAGACCAGCTGGGACCTTCTTTGCAGTACAATTTGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp GTAACGCTGAGCCCAACAAGATCGCCTTCCTGTAACCATTTGAAGATAGCACCAAAAGGCACCAGTATCTaGTTGCAACCGGCGGCCAGC +
Preference number: 4 (lower is better)
Translates to: VTLSPTRSPSCNHLKIAPKGTSI*LQPAAS
Trigger: GCTGGCCGCCGGTTGCAAGCAGATACTGGTGCCTTT...TGGTGCTATCTTCAAATGGTTACAGGAAGGCGATCTTGTTGGGCTCAGCGTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp GCTCCGTTCCCTCTAGATACACGTAACGCTGAGCCCAACAAGATCGCCTTCCTGATGGTCAGTTCCTCTTaGTCTGTGTCGTCTGAAGCA +
Preference number: 4 (lower is better)
Translates to: APFPLDTRNAEPNKIAFLMVSSS*SVSSEA
Trigger: TGCTTCAGACGACACAGAGCAAGAGGAACTGACCAT...CAGGAAGGCGATCTTGTTGGGCTCAGCGTTACGTGTATCTAGAGGGAACGGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp GTTCCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGATGGTCAGTTCCTCTTaGTCTGTGTCGTCTGAAGCA +
Preference number: 4 (lower is better)
Translates to: VPLALCRLKQVEALLLVPMVSSS*SVSSEA
Trigger: TGCTTCAGACGACACAGAGCAAGAGGAACTGACCAT...CGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CTTAAGCTGACCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTCTTTCTAGTGGACAGTaGTGCTCTGTCTTCCTCCAT +
Preference number: 4 (lower is better)
Translates to: LKLTLRLAEDNPFCPLHRLSSGQ*CSVFLH
Trigger: ATGGAGGAAGACAGAGCAGCACTGTCCACTAGAAAG...ACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGGTCAGCTTAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp ATAGTTGGGGTTCAGGGTGTCGATGGCCATCTCAAGCTCTACCTTCTGCTGCTTCCCAGCTTTAACTGCTaGACACTTCTGCCTCTCCTG +
Preference number: 4 (lower is better)
Translates to: IVGVQGVDGHLKLYLLLLPSFNC*TLLPLL
Trigger: CAGGAGAGGCAGAAGTGTGCAGCAGTTAAAGCTGGG...AAGCAGCAGAAGGTAGAGCTTGAGATGGCCATCGACACCCTGAACCCCAACTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561494.5
CDS-3UTR CCA 90 bp CCACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGGATCTCCTGTACAACTaGGTCATCCTCTTCATTGGC +
Preference number: 4 (lower is better)
Translates to: PLHRAMPQVMRWSVPLALDLLYN*VILFIG
Trigger: GCCAATGAAGAGGATGACCCAGTTGTACAGGAGATC...CAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGTGG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp GCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGTTAGTAGTAGGTCATCGAGGCTaGACGCACAGGGTACTGAAA +
Preference number: 4 (lower is better)
Translates to: ALLLVPPFFLGLRFAGLVVGHRG*THRVLK
Trigger: TTTCAGTACCCTGTGCGTCCAGCCTCGATGACCTAC...TACTAACCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp GCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGTTAGTAGGGATGTGTTACTGGTaGTCTGGGAAGAGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: ALLLVPPFFLGLRFAGLVGMCYW*SGKSRR
Trigger: CCTTCTGCTCTTCCCAGACCACCAGTAACACATCCC...TACTAACCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGTCGTCTGAACGGGATGTGTTACTaGTGGTCTGGGAAGAGCAGA +
Preference number: 4 (lower is better)
Translates to: RAMPQVMRWSVPLALCRLNGMCY*WSGKSR
Trigger: TCTGCTCTTCCCAGACCACCAGTAACACATCCCGTT...CAGACGACACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp ACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGTTTTCCAGTTTGGCCTaGATACCCGTCCACAGCATG +
Preference number: 4 (lower is better)
Translates to: TAPCNATGHEMVSSSCSVFSSLA*IPVHSM
Trigger: CATGCTGTGGACGGGTATCCAGGCCAAACTGGAAAA...CACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp GAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGTTATTTTCCAGTTTGGCCTaGATACCCGTCCACAGCATG +
Preference number: 4 (lower is better)
Translates to: EALLLVPPFFLGLRFAGLFSSLA*IPVHSM
Trigger: CATGCTGTGGACGGGTATCCAGGCCAAACTGGAAAA...TAACCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp GTTCCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGAGACTTTTTCCAGTTTaGCCTGGATACCCGTCCACA +
Preference number: 4 (lower is better)
Translates to: VPLALCRLKQVEALLLVPRLFPV*PGYPST
Trigger: TGTGGACGGGTATCCAGGCCAAACTGGAAAAAGTCT...CGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGGAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp AAGCTGACCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCATGCATCCGGCTTCTTTaGCATGGTTTCCTTTACAAG +
Preference number: 4 (lower is better)
Translates to: KLTLRLAEDNPFCPLHRACIRLL*HGFLYK
Trigger: CTTGTAAAGGAAACCATGCCAAAGAAGCCGGATGCA...TGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGGTCAGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTTGCATCCGGCTTCTTTaGCATGGTTTCCTTTACAAG +
Preference number: 4 (lower is better)
Translates to: RLKQVEALLLVPPFFLGLCIRLL*HGFLYK
Trigger: CTTGTAAAGGAAACCATGCCAAAGAAGCCGGATGCA...AAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAATGCCACAGGTCTGCATCCGGCTTCTTTaGCATGGTTTCCTTTACAAG +
Preference number: 4 (lower is better)
Translates to: RLAEDNPFCPLHRAMPQVCIRLL*HGFLYK
Trigger: CTTGTAAAGGAAACCATGCCAAAGAAGCCGGATGCA...GACCTGTGGCATTGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp AAGCTGACCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAGGAGCACTTATGATGTaGCTAGTCCAAACTGAGTGT +
Preference number: 4 (lower is better)
Translates to: KLTLRLAEDNPFCPLHRAGALMM*LVQTEC
Trigger: ACACTCAGTTTGGACTAGCCACATCATAAGTGCTCC...TGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGGTCAGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp CACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGTCGTGGACGCACAGGGTACTaGAATAGATACAGCTTTTCC +
Preference number: 4 (lower is better)
Translates to: HRAMPQVMRWSVPLALCRGRTGY*NRYSFS
Trigger: GGAAAAGCTGTATCTATTTCAGTACCCTGTGCGTCC...ACGACACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp AACCATGATTTTTATCATCCTGCCCATGTCAGTATACACTCTCTTTATTATGAGCTGGCGGGCCTGCTCTaGCTCCGGCCGGGAGAACCG +
Preference number: 4 (lower is better)
Translates to: NHDFYHPAHVSIHSLYYELAGLL*LRPGEP
Trigger: CGGTTCTCCCGGCCGGAGTCAGAGCAGGCCCGCCAG...CTCATAATAAAGAGAGTGTATACTGACATGGGCAGGATGATAAAAATCATGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000299853.10
ENST00000418581.6
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp TTTCAAATTGTACTGCAAAGAAGGTCCCAGCTGGTCTCTTCTGGGAGTGATCTAGGGCACAGCAGGTACTaGCGCTCATGCTCAGAGCGA +
Preference number: 4 (lower is better)
Translates to: FQIVLQRRSQLVSSGSDLGHSRY*RSCSER
Trigger: TCGCTCTGAGCATGAGCGTCAGTACCTGCTGTGCCC...TAGATCACTCCCAGAAGAGACCAGCTGGGACCTTCTTTGCAGTACAATTTGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp GAGTGGGGAAATAGCATAGACCGTCATTTAAACCTTCAGACAATTAGTGACTGTGTTCTCCACCCCGCTTaGGCCGGGGCACAGCAGGTA +
Preference number: 4 (lower is better)
Translates to: EWGNSIDRHLNLQTISDCVLHPA*AGAQQV
Trigger: TACCTGCTGTGCCCCGGCTCAAGCGGGGTGGAGAAC...ACAGTCACTAATTGTCTGAAGGTTTAAATGACGGTCTATGCTATTTCCCCACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp CGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAATGCCACAGGTCAGTTGGCAAAAGGCATaGCCTTCACATTCTTCATCA +
Preference number: 4 (lower is better)
Translates to: RLAEDNPFCPLHRAMPQVSWQKA*PSHSSS
Trigger: TGATGAAGAATGTGAAGGTCATGCCTTTTGCCAACT...GACCTGTGGCATTGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp TCCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCAGTTGGCAAAAGGCATaGCCTTCACATTCTTCATCA +
Preference number: 4 (lower is better)
Translates to: SSCSVSSEASRGPTSGSASWQKA*PSHSSS
Trigger: TGATGAAGAATGTGAAGGTCATGCCTTTTGCCAACT...GGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp CGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGTCGTCTGAAAACCTGTCGATGCTaGTCACTCATGTCTCCAGAC +
Preference number: 4 (lower is better)
Translates to: RAMPQVMRWSVPLALCRLKTCRC*SLMSPD
Trigger: GTCTGGAGACATGAGTGATCAGCATCGACAGGTTTT...CAGACGACACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299853.10
ENST00000418581.6
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGTCGTCTGTCAAGCTCTACCTTCTaGTGCTTGGGCTTGATCTTG +
Preference number: 4 (lower is better)
Translates to: RAMPQVMRWSVPLALCRLSSSTF*CLGLIL
Trigger: CAAGATCAAGCCCAAGCAGCAGAAGGTAGAGCTTGA...CAGACGACACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000564209.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp TTTGCTGCGGCAATAGTTGGGGTTCAGGGTGTCGATGGCCATCTCAAGCTCTACTCAAGCTCTACCTTCTaGTGCTTGGGCTTGATCTTG +
Preference number: 4 (lower is better)
Translates to: FAAAIVGVQGVDGHLKLYSSSTF*CLGLIL
Trigger: CAAGATCAAGCCCAAGCAGCAGAAGGTAGAGCTTGA...GTAGAGCTTGAGATGGCCATCGACACCCTGAACCCCAACTATTGCCGCAGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561494.5
CDS-3UTR GCA 90 bp TGTCCACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTTCAAGCTCTACCTTCTaGTGCTTGGGCTTGATCTTG +
Preference number: 4 (lower is better)
Translates to: CPLHRAMPQVMRWSVPLASSSTF*CLGLIL
Trigger: CAAGATCAAGCCCAAGCAGCAGAAGGTAGAGCTTGA...AGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGTGGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000564209.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp GAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGTTATCAAGCTCTACCTTCTaGTGCTTGGGCTTGATCTTG +
Preference number: 4 (lower is better)
Translates to: EALLLVPPFFLGLRFAGLSSSTF*CLGLIL
Trigger: CAAGATCAAGCCCAAGCAGCAGAAGGTAGAGCTTGA...TAACCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000564209.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp GTAACGCTGAGCCCAACAAGATCGCCTTCCTGTAACCATTTGAAGATAGCACCAACGTTCAGCGCAATCTaGTCCCCTTTGCTGCGGCAA +
Preference number: 4 (lower is better)
Translates to: VTLSPTRSPSCNHLKIAPTFSAI*SPLLRQ
Trigger: TTGCCGCAGCAAAGGGGAGCAGATTGCGCTGAACGT...TGGTGCTATCTTCAAATGGTTACAGGAAGGCGATCTTGTTGGGCTCAGCGTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp GTAACGCTGAGCCCAACAAGATCGCCTTCCTGTAACCATTTGAAGATAGCACCAGCCGCAGCTGCAGGATaGCATGTAAAGGTGTCAGGT +
Preference number: 4 (lower is better)
Translates to: VTLSPTRSPSCNHLKIAPAAAAG*HVKVSG
Trigger: ACCTGACACCTTTACATGGCATCCTGCAGCTGCGGC...TGGTGCTATCTTCAAATGGTTACAGGAAGGCGATCTTGTTGGGCTCAGCGTTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp GTAACGCTGAGCCCAACAAGATCGCCTTCCTGTAACCATTTGAAGATAGCACCACAGGGCTCCTCTGCGTaGTTCTTCTGCAGGAACTCA +
Preference number: 4 (lower is better)
Translates to: VTLSPTRSPSCNHLKIAPQGSSA*FFCRNS
Trigger: TGAGTTCCTGCAGAAGAAGCACGCAGAGGAGCCCTG...TGGTGCTATCTTCAAATGGTTACAGGAAGGCGATCTTGTTGGGCTCAGCGTTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CAAATTGTACTGCAAAGAAGGTCCCAGCTGGTCTCTTCTGGGAGTGATCTAACTGGCAGGCTGGCCAAGTaGAGATTGAAGAGGCGCTTG +
Preference number: 4 (lower is better)
Translates to: QIVLQRRSQLVSSGSDLTGRLAK*RLKRRL
Trigger: CAAGCGCCTCTTCAATCTGCACTTGGCCAGCCTGCC...AGTTAGATCACTCCCAGAAGAGACCAGCTGGGACCTTCTTTGCAGTACAATTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CAAAATTATGTACGTGACTCGCCTCTTTCTAGTGGACAGTGCTGCTCTGTCTTCAAAGGCACCAGTATCTaGTTGCAACCGGCGGCCAGC +
Preference number: 4 (lower is better)
Translates to: QNYVRDSPLSSGQCCSVFKGTSI*LQPAAS
Trigger: GCTGGCCGCCGGTTGCAAGCAGATACTGGTGCCTTT...GAAGACAGAGCAGCACTGTCCACTAGAAAGAGGCGAGTCACGTACATAATTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp GTAACGCTGAGCCCAACAAGATCGCCTTCCTGTAACCATTTGAAGATAGCACCAAGGGCAAACACCTTCTaGTCATCCGGGGAAGCAGCA +
Preference number: 4 (lower is better)
Translates to: VTLSPTRSPSCNHLKIAPRANTF*SSGEAA
Trigger: TGCTGCTTCCCCGGATGAGCAGAAGGTGTTTGCCCT...TGGTGCTATCTTCAAATGGTTACAGGAAGGCGATCTTGTTGGGCTCAGCGTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAATGCCACGCTGGGTTAGTAGTTTaGTACTATTGTCAAGACTGT +
Preference number: 4 (lower is better)
Translates to: PCDWLRIIPSVHCTVQCHAGLVV*YYCQDC
Trigger: ACAGTCTTGACAATAGTAGCAAACTACTAACCCAGC...GTGGCATTGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp ACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGATGGTCAGTTCCTCTTaGTCTGTGTCGTCTGAAGCA +
Preference number: 4 (lower is better)
Translates to: TAPCNATGHEMVSSSCSVMVSSS*SVSSEA
Trigger: TGCTTCAGACGACACAGAGCAAGAGGAACTGACCAT...CACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp GTAACGCTGAGCCCAACAAGATCGCCTTCCTGTAACCATTTGAAGATAGCACCACTGTCCACTGCACCGTaGAATGCCACAGGTCATGAG +
Preference number: 4 (lower is better)
Translates to: VTLSPTRSPSCNHLKIAPLSTAP*NATGHE
Trigger: CTCATGACCTGTGGCATTGCACGGTGCAGTGGACAG...TGGTGCTATCTTCAAATGGTTACAGGAAGGCGATCTTGTTGGGCTCAGCGTTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CCATTAGCTCCGTTCCCTCTAGATACACGTAACGCTGAGCCCAACAAGATCGCCCTTTCTAGTGGACAGTaGTGCTCTGTCTTCCTCCAT +
Preference number: 4 (lower is better)
Translates to: PLAPFPLDTRNAEPNKIALSSGQ*CSVFLH
Trigger: ATGGAGGAAGACAGAGCAGCACTGTCCACTAGAAAG...GGCGATCTTGTTGGGCTCAGCGTTACGTGTATCTAGAGGGAACGGAGCTAATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp TGTCCACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTTTCTAGTGGACAGTaGTGCTCTGTCTTCCTCCAT +
Preference number: 4 (lower is better)
Translates to: CPLHRAMPQVMRWSVPLALSSGQ*CSVFLH
Trigger: ATGGAGGAAGACAGAGCAGCACTGTCCACTAGAAAG...AGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGTGGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CCATTAGCTCCGTTCCCTCTAGATACACGTAACGCTGAGCCCAACAAGATCGCCGATCTCCTGTACAACTaGGTCATCCTCTTCATTGGC +
Preference number: 4 (lower is better)
Translates to: PLAPFPLDTRNAEPNKIADLLYN*VILFIG
Trigger: GCCAATGAAGAGGATGACCCAGTTGTACAGGAGATC...GGCGATCTTGTTGGGCTCAGCGTTACGTGTATCTAGAGGGAACGGAGCTAATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299853.10
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGTCGTCTGGATCTCCTGTACAACTaGGTCATCCTCTTCATTGGC +
Preference number: 4 (lower is better)
Translates to: RAMPQVMRWSVPLALCRLDLLYN*VILFIG
Trigger: GCCAATGAAGAGGATGACCCAGTTGTACAGGAGATC...CAGACGACACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp GTAACGCTGAGCCCAACAAGATCGCCTTCCTGTAACCATTTGAAGATAGCACCATGCTGCGGCAATAGTTaGGGTTCAGGGTGTCGATGG +
Preference number: 4 (lower is better)
Translates to: VTLSPTRSPSCNHLKIAPCCGNS*GSGCRW
Trigger: CCATCGACACCCTGAACCCCAACTATTGCCGCAGCA...TGGTGCTATCTTCAAATGGTTACAGGAAGGCGATCTTGTTGGGCTCAGCGTTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp GCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGTTAGTAAACGGGATGTGTTACTaGTGGTCTGGGAAGAGCAGA +
Preference number: 4 (lower is better)
Translates to: ALLLVPPFFLGLRFAGLVNGMCY*WSGKSR
Trigger: TCTGCTCTTCCCAGACCACCAGTAACACATCCCGTT...TACTAACCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CAAATTGTACTGCAAAGAAGGTCCCAGCTGGTCTCTTCTGGGAGTGATCTAACTCCTCGGCGCAGAGTTTaGTCACGGTTGCCACCTCTT +
Preference number: 4 (lower is better)
Translates to: QIVLQRRSQLVSSGSDLTPRRRV*SRLPPL
Trigger: AAGAGGTGGCAACCGTGACCAAACTCTGCGCCGAGG...AGTTAGATCACTCCCAGAAGAGACCAGCTGGGACCTTCTTTGCAGTACAATTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp TTTCAAATTGTACTGCAAAGAAGGTCCCAGCTGGTCTCTTCTGGGAGTGATCTAAGCATGTGCTGCCGCTaGACCACATCCGGGTGCTTC +
Preference number: 4 (lower is better)
Translates to: FQIVLQRRSQLVSSGSDLSMCCR*TTSGCF
Trigger: GAAGCACCCGGATGTGGTCCAGCGGCAGCACATGCT...TAGATCACTCCCAGAAGAGACCAGCTGGGACCTTCTTTGCAGTACAATTTGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CGGGTGCTTCTTGATGAACTCCCCATCATAAGGCAGAATGAACTCCCAGCCTTTGGTTCTGCTGGGCCTTaGTTTTGGCTACTTGGATCC +
Preference number: 4 (lower is better)
Translates to: RVLLDELPIIRQNELPAFGSAGP*FWLLGS
Trigger: GGATCCAAGTAGCCAAAACCAAGGCCCAGCAGAACC...AAAGGCTGGGAGTTCATTCTGCCTTATGATGGGGAGTTCATCAAGAAGCACCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564750.5
CDS-3UTR CCA 90 bp AGAAACTTTCAAAATTATGTACGTGACTCGCCTCTTTCTAGTGGACAGTGCTGCTGCTGTGGAGGCCGCTaGGGGAAGTGTCCATGGGCT +
Preference number: 4 (lower is better)
Translates to: RNFQNYVRDSPLSSGQCCCCGGR*GKCPWA
Trigger: AGCCCATGGACACTTCCCCCAGCGGCCTCCACAGCA...GCAGCACTGTCCACTAGAAAGAGGCGAGTCACGTACATAATTTTGAAAGTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp CAAATTGTACTGCAAAGAAGGTCCCAGCTGGTCTCTTCTGGGAGTGATCTAACTGGGCTTGATCTTGGCTaGGAGGTGCGGAATGTCATC +
Preference number: 4 (lower is better)
Translates to: QIVLQRRSQLVSSGSDLTGLDLG*EVRNVI
Trigger: GATGACATTCCGCACCTCTCAGCCAAGATCAAGCCC...AGTTAGATCACTCCCAGAAGAGACCAGCTGGGACCTTCTTTGCAGTACAATTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp CTTAAGCTGACCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTAGTTGGCAAAAGGCATaGCCTTCACATTCTTCATCA +
Preference number: 4 (lower is better)
Translates to: LKLTLRLAEDNPFCPLHRSWQKA*PSHSSS
Trigger: TGATGAAGAATGTGAAGGTCATGCCTTTTGCCAACT...ACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGGTCAGCTTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp CAAAATTATGTACGTGACTCGCCTCTTTCTAGTGGACAGTGCTGCTCTGTCTTCACTCCCAGCCTTTGTTaGTCCTCACCACGGCCATGT +
Preference number: 4 (lower is better)
Translates to: QNYVRDSPLSSGQCCSVFTPSLC*SSPRPC
Trigger: ACATGGCCGTGGTGAGGATCAACAAAGGCTGGGAGT...GAAGACAGAGCAGCACTGTCCACTAGAAAGAGGCGAGTCACGTACATAATTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp GCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGTTAGTACCACCTCCTGTTTACTaGGATCTTCTCCACACTCTT +
Preference number: 4 (lower is better)
Translates to: ALLLVPPFFLGLRFAGLVPPPVY*DLLHTL
Trigger: AAGAGTGTGGAGAAGATCTCAGTAAACAGGAGGTGG...TACTAACCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299853.10
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp CAAATTGTACTGCAAAGAAGGTCCCAGCTGGTCTCTTCTGGGAGTGATCTAACTTTGCTCTGTGTCGTCTaGAGCAAGTCGAGGCCCTAC +
Preference number: 4 (lower is better)
Translates to: QIVLQRRSQLVSSGSDLTLLCVV*SKSRPY
Trigger: GTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAA...AGTTAGATCACTCCCAGAAGAGACCAGCTGGGACCTTCTTTGCAGTACAATTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp GCTCCGTTCCCTCTAGATACACGTAACGCTGAGCCCAACAAGATCGCCTTCCTGGTCCAAACTGAGTGTTaGGGAAAGTGTAAAATGCCA +
Preference number: 4 (lower is better)
Translates to: APFPLDTRNAEPNKIAFLVQTEC*GKCKMP
Trigger: TGGCATTTTACACTTTCCTCAACACTCAGTTTGGAC...CAGGAAGGCGATCTTGTTGGGCTCAGCGTTACGTGTATCTAGAGGGAACGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp CCACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGGTCCAAACTGAGTGTTaGGGAAAGTGTAAAATGCCA +
Preference number: 4 (lower is better)
Translates to: PLHRAMPQVMRWSVPLALVQTEC*GKCKMP
Trigger: TGGCATTTTACACTTTCCTCAACACTCAGTTTGGAC...CAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp GCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGTTAGTATCAAGCTCTACCTTCTaGTGCTTGGGCTTGATCTTG +
Preference number: 4 (lower is better)
Translates to: ALLLVPPFFLGLRFAGLVSSSTF*CLGLIL
Trigger: CAAGATCAAGCCCAAGCAGCAGAAGGTAGAGCTTGA...TACTAACCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000564209.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CAAATTGTACTGCAAAGAAGGTCCCAGCTGGTCTCTTCTGGGAGTGATCTAACTGCCGCAGCTGCAGGATaGCATGTAAAGGTGTCAGGT +
Preference number: 4 (lower is better)
Translates to: QIVLQRRSQLVSSGSDLTAAAAG*HVKVSG
Trigger: ACCTGACACCTTTACATGGCATCCTGCAGCTGCGGC...AGTTAGATCACTCCCAGAAGAGACCAGCTGGGACCTTCTTTGCAGTACAATTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CAAAATTATGTACGTGACTCGCCTCTTTCTAGTGGACAGTGCTGCTCTGTCTTCGCCGCAGCTGCAGGATaGCATGTAAAGGTGTCAGGT +
Preference number: 4 (lower is better)
Translates to: QNYVRDSPLSSGQCCSVFAAAAG*HVKVSG
Trigger: ACCTGACACCTTTACATGGCATCCTGCAGCTGCGGC...GAAGACAGAGCAGCACTGTCCACTAGAAAGAGGCGAGTCACGTACATAATTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp GAGTGGGGAAATAGCATAGACCGTCATTTAAACCTTCAGACAATTAGTGACTGTTCGCCACCTTCTGGATaGCCCGCAGAACAGCCACGG +
Preference number: 4 (lower is better)
Translates to: EWGNSIDRHLNLQTISDCSPPSG*PAEQPR
Trigger: CCGTGGCTGTTCTGCGGGGCATCCAGAAGGTGGCGA...ACAGTCACTAATTGTCTGAAGGTTTAAATGACGGTCTATGCTATTTCCCCACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp GTAACGCTGAGCCCAACAAGATCGCCTTCCTGTAACCATTTGAAGATAGCACCATGGACCACATCCGGGTaGTTCTTGATGAACTCCCCA +
Preference number: 4 (lower is better)
Translates to: VTLSPTRSPSCNHLKIAPWTTSG*FLMNSP
Trigger: TGGGGAGTTCATCAAGAAGCACCCGGATGTGGTCCA...TGGTGCTATCTTCAAATGGTTACAGGAAGGCGATCTTGTTGGGCTCAGCGTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp TTTAAACTAATGTGGTTGCTAGAAACTTTCAAAATTATGTACGTGACTCGCCTCGCAGGCACCCGCAGCTaGTCCTTCCGCCGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: FKLMWLLETFKIMYVTRLAGTRS*SFRRCS
Trigger: GCTGCAGCGGCGGAAGGAGCAGCTGCGGGTGCCTGC...GAGGCGAGTCACGTACATAATTTTGAAAGTTTCTAGCAACCACATTAGTTTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp TTTAAACTAATGTGGTTGCTAGAAACTTTCAAAATTATGTACGTGACTCGCCTCGCCCGTTGGCCAGCTTaGTGTGGAGGCCGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: FKLMWLLETFKIMYVTRLARWPA*CGGRWG
Trigger: CCCCCAGCGGCCTCCACAGCAAGCTGGCCAACGGGC...GAGGCGAGTCACGTACATAATTTTGAAAGTTTCTAGCAACCACATTAGTTTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp TTTCAAATTGTACTGCAAAGAAGGTCCCAGCTGGTCTCTTCTGGGAGTGATCTAGGCAGGCTGGCCAAGTaGAGATTGAAGAGGCGCTTG +
Preference number: 4 (lower is better)
Translates to: FQIVLQRRSQLVSSGSDLGRLAK*RLKRRL
Trigger: CAAGCGCCTCTTCAATCTGCACTTGGCCAGCCTGCC...TAGATCACTCCCAGAAGAGACCAGCTGGGACCTTCTTTGCAGTACAATTTGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp AAGCTGACCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAGCTGGGTTAGTAGTTTaGTACTATTGTCAAGACTGT +
Preference number: 4 (lower is better)
Translates to: KLTLRLAEDNPFCPLHRAAGLVV*YYCQDC
Trigger: ACAGTCTTGACAATAGTAGCAAACTACTAACCCAGC...TGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGGTCAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAATGCCACAGGTCGCTGGGTTAGTAGTTTaGTACTATTGTCAAGACTGT +
Preference number: 4 (lower is better)
Translates to: RLAEDNPFCPLHRAMPQVAGLVV*YYCQDC
Trigger: ACAGTCTTGACAATAGTAGCAAACTACTAACCCAGC...GACCTGTGGCATTGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCTTCGCTGGGTTAGTAGTTTaGTACTATTGTCAAGACTGT +
Preference number: 4 (lower is better)
Translates to: LALCRLKQVEALLLVPPFAGLVV*YYCQDC
Trigger: ACAGTCTTGACAATAGTAGCAAACTACTAACCCAGC...GAAGGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CAAAATTATGTACGTGACTCGCCTCTTTCTAGTGGACAGTGCTGCTCTGTCTTCATCCCTTCTGTCCACTaGACCGTGCAATGCCACAGG +
Preference number: 4 (lower is better)
Translates to: QNYVRDSPLSSGQCCSVFIPSVH*TVQCHR
Trigger: CCTGTGGCATTGCACGGTGCAGTGGACAGAAGGGAT...GAAGACAGAGCAGCACTGTCCACTAGAAAGAGGCGAGTCACGTACATAATTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp GCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGTTAGTAGATCTCCTGTACAACTaGGTCATCCTCTTCATTGGC +
Preference number: 4 (lower is better)
Translates to: ALLLVPPFFLGLRFAGLVDLLYN*VILFIG
Trigger: GCCAATGAAGAGGATGACCCAGTTGTACAGGAGATC...TACTAACCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CAAAATTATGTACGTGACTCGCCTCTTTCTAGTGGACAGTGCTGCTCTGTCTTCTGCTGCGGCAATAGTTaGGGTTCAGGGTGTCGATGG +
Preference number: 4 (lower is better)
Translates to: QNYVRDSPLSSGQCCSVFCCGNS*GSGCRW
Trigger: CCATCGACACCCTGAACCCCAACTATTGCCGCAGCA...GAAGACAGAGCAGCACTGTCCACTAGAAAGAGGCGAGTCACGTACATAATTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CAAATTGTACTGCAAAGAAGGTCCCAGCTGGTCTCTTCTGGGAGTGATCTAACTCTCCTCCTGGCTGGGTaGCATCAGCATCATCAGGTA +
Preference number: 4 (lower is better)
Translates to: QIVLQRRSQLVSSGSDLTLLLAG*HQHHQV
Trigger: TACCTGATGATGCTGATGCCACCCAGCCAGGAGGAG...AGTTAGATCACTCCCAGAAGAGACCAGCTGGGACCTTCTTTGCAGTACAATTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CAAAATTATGTACGTGACTCGCCTCTTTCTAGTGGACAGTGCTGCTCTGTCTTCTCTTTCTCCTCCTCCTaGCTGGGTGGCATCAGCATC +
Preference number: 4 (lower is better)
Translates to: QNYVRDSPLSSGQCCSVFSFSSS*LGGISI
Trigger: GATGCTGATGCCACCCAGCCAGGAGGAGGAGAAAGA...GAAGACAGAGCAGCACTGTCCACTAGAAAGAGGCGAGTCACGTACATAATTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp GTAACGCTGAGCCCAACAAGATCGCCTTCCTGTAACCATTTGAAGATAGCACCAGGCTGGACGAGTCCTTaGGGTATAGGATGTCACTCT +
Preference number: 4 (lower is better)
Translates to: VTLSPTRSPSCNHLKIAPGWTSP*GIGCHS
Trigger: AGAGTGACATCCTATACCCCAAGGACTCGTCCAGCC...TGGTGCTATCTTCAAATGGTTACAGGAAGGCGATCTTGTTGGGCTCAGCGTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp AGAAACTTTCAAAATTATGTACGTGACTCGCCTCTTTCTAGTGGACAGTGCTGCCGCCGCTGTGAGGGCTaGACGAGTCCTTGGGGTATA +
Preference number: 4 (lower is better)
Translates to: RNFQNYVRDSPLSSGQCCRRCEG*TSPWGI
Trigger: TATACCCCAAGGACTCGTCCAGCCCTCACAGCGGCG...GCAGCACTGTCCACTAGAAAGAGGCGAGTCACGTACATAATTTTGAAAGTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp GTCGAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGCCGGCTTCTTTGGCATaGTTTCCTTTACAAGATTAT +
Preference number: 4 (lower is better)
Translates to: VEALLLVPPFFLGLRFAGPASLA*FPLQDY
Trigger: ATAATCTTGTAAAGGAAACCATGCCAAAGAAGCCGG...CCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTCGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp AAGCTGACCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCACCGGCTTCTTTGGCATaGTTTCCTTTACAAGATTAT +
Preference number: 4 (lower is better)
Translates to: KLTLRLAEDNPFCPLHRAPASLA*FPLQDY
Trigger: ATAATCTTGTAAAGGAAACCATGCCAAAGAAGCCGG...TGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGGTCAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp ACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGTGCATCCGGCTTCTTTaGCATGGTTTCCTTTACAAG +
Preference number: 4 (lower is better)
Translates to: TAPCNATGHEMVSSSCSVCIRLL*HGFLYK
Trigger: CTTGTAAAGGAAACCATGCCAAAGAAGCCGGATGCA...CACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp ATCAGCATCATCAGGTACTCACTGGGTGACTTGACGAGCTCCGTGTTCTCCACCTGCATCCGGCTTCTTTaGCATGGTTTCCTTTACAAG +
Preference number: 4 (lower is better)
Translates to: ISIIRYSLGDLTSSVFSTCIRLL*HGFLYK
Trigger: CTTGTAAAGGAAACCATGCCAAAGAAGCCGGATGCA...GGTGGAGAACACGGAGCTCGTCAAGTCACCCAGTGAGTACCTGATGATGCTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564750.5
CDS-3UTR CCA 90 bp CGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGTCGTCTGTGCATCCGGCTTCTTTaGCATGGTTTCCTTTACAAG +
Preference number: 4 (lower is better)
Translates to: RAMPQVMRWSVPLALCRLCIRLL*HGFLYK
Trigger: CTTGTAAAGGAAACCATGCCAAAGAAGCCGGATGCA...CAGACGACACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CCATTAGCTCCGTTCCCTCTAGATACACGTAACGCTGAGCCCAACAAGATCGCCTGCATCCGGCTTCTTTaGCATGGTTTCCTTTACAAG +
Preference number: 4 (lower is better)
Translates to: PLAPFPLDTRNAEPNKIACIRLL*HGFLYK
Trigger: CTTGTAAAGGAAACCATGCCAAAGAAGCCGGATGCA...GGCGATCTTGTTGGGCTCAGCGTTACGTGTATCTAGAGGGAACGGAGCTAATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CAAATTGTACTGCAAAGAAGGTCCCAGCTGGTCTCTTCTGGGAGTGATCTAACTGCTGGGCCTTGGTTTTaGCTACTTGGATCCGCTGGT +
Preference number: 4 (lower is better)
Translates to: QIVLQRRSQLVSSGSDLTAGPWF*LLGSAG
Trigger: ACCAGCGGATCCAAGTAGCCAAAACCAAGGCCCAGC...AGTTAGATCACTCCCAGAAGAGACCAGCTGGGACCTTCTTTGCAGTACAATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGTCGTCTGGGAGCACTTATGATGTaGCTAGTCCAAACTGAGTGT +
Preference number: 4 (lower is better)
Translates to: RAMPQVMRWSVPLALCRLGALMM*LVQTEC
Trigger: ACACTCAGTTTGGACTAGCCACATCATAAGTGCTCC...CAGACGACACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp ACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGAGTTGGCAAAAGGCATaGCCTTCACATTCTTCATCA +
Preference number: 4 (lower is better)
Translates to: TAPCNATGHEMVSSSCSVSWQKA*PSHSSS
Trigger: TGATGAAGAATGTGAAGGTCATGCCTTTTGCCAACT...CACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp CACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGTCGTAGTTGGCAAAAGGCATaGCCTTCACATTCTTCATCA +
Preference number: 4 (lower is better)
Translates to: HRAMPQVMRWSVPLALCRSWQKA*PSHSSS
Trigger: TGATGAAGAATGTGAAGGTCATGCCTTTTGCCAACT...ACGACACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp CAAATTGTACTGCAAAGAAGGTCCCAGCTGGTCTCTTCTGGGAGTGATCTAACTAGCACAAACTGTCTCTaGAAGGTGGCCTCCACGAAG +
Preference number: 4 (lower is better)
Translates to: QIVLQRRSQLVSSGSDLTSTNCL*KVASTK
Trigger: CTTCGTGGAGGCCACCTTTCAGAGACAGTTTGTGCT...AGTTAGATCACTCCCAGAAGAGACCAGCTGGGACCTTCTTTGCAGTACAATTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp TTTAAACTAATGTGGTTGCTAGAAACTTTCAAAATTATGTACGTGACTCGCCTCGGTCCGAGATGCCGCTaGAGAGTGTGTGGCCGGGGG +
Preference number: 4 (lower is better)
Translates to: FKLMWLLETFKIMYVTRLGPRCR*RVCGRG
Trigger: CCCCCGGCCACACACTCTTCAGCGGCATCTCGGACC...GAGGCGAGTCACGTACATAATTTTGAAAGTTTCTAGCAACCACATTAGTTTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp CAAATTGTACTGCAAAGAAGGTCCCAGCTGGTCTCTTCTGGGAGTGATCTAACTCTAACTAACTTAAGCTaGCCCTGCGACTGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: QIVLQRRSQLVSSGSDLTLTNLS*PCDWLR
Trigger: CCTCAGCCAGTCGCAGGGTCAGCTTAAGTTAGTTAG...AGTTAGATCACTCCCAGAAGAGACCAGCTGGGACCTTCTTTGCAGTACAATTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp CAAAATTATGTACGTGACTCGCCTCTTTCTAGTGGACAGTGCTGCTCTGTCTTCCTAACTAACTTAAGCTaGCCCTGCGACTGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: QNYVRDSPLSSGQCCSVFLTNLS*PCDWLR
Trigger: CCTCAGCCAGTCGCAGGGTCAGCTTAAGTTAGTTAG...GAAGACAGAGCAGCACTGTCCACTAGAAAGAGGCGAGTCACGTACATAATTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CAAAATTATGTACGTGACTCGCCTCTTTCTAGTGGACAGTGCTGCTCTGTCTTCTCTGCTCCCCTTTGCTaGGGCAATAGTTGGGGTTCA +
Preference number: 4 (lower is better)
Translates to: QNYVRDSPLSSGQCCSVFSAPLC*GNSWGS
Trigger: TGAACCCCAACTATTGCCGCAGCAAAGGGGAGCAGA...GAAGACAGAGCAGCACTGTCCACTAGAAAGAGGCGAGTCACGTACATAATTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CAAATTGTACTGCAAAGAAGGTCCCAGCTGGTCTCTTCTGGGAGTGATCTAACTCAATCTGCTCCCCTTTaGTGCGGCAATAGTTGGGGT +
Preference number: 4 (lower is better)
Translates to: QIVLQRRSQLVSSGSDLTQSAPL*CGNSWG
Trigger: ACCCCAACTATTGCCGCAGCAAAGGGGAGCAGATTG...AGTTAGATCACTCCCAGAAGAGACCAGCTGGGACCTTCTTTGCAGTACAATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CAAATTGTACTGCAAAGAAGGTCCCAGCTGGTCTCTTCTGGGAGTGATCTAACTACCTTGCCTGTAGAGTaGAGCGGCATAACGGGATGT +
Preference number: 4 (lower is better)
Translates to: QIVLQRRSQLVSSGSDLTTLPVE*SGITGC
Trigger: ACATCCCGTTATGCCGCTGCACTCTACAGGCAAGGT...AGTTAGATCACTCCCAGAAGAGACCAGCTGGGACCTTCTTTGCAGTACAATTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp AGAAACTTTCAAAATTATGTACGTGACTCGCCTCTTTCTAGTGGACAGTGCTGCGGCAGGCTGGCCAAGTaGAGATTGAAGAGGCGCTTG +
Preference number: 4 (lower is better)
Translates to: RNFQNYVRDSPLSSGQCCGRLAK*RLKRRL
Trigger: CAAGCGCCTCTTCAATCTGCACTTGGCCAGCCTGCC...GCAGCACTGTCCACTAGAAAGAGGCGAGTCACGTACATAATTTTGAAAGTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp TTTCAAATTGTACTGCAAAGAAGGTCCCAGCTGGTCTCTTCTGGGAGTGATCTAAGGGCAAACACCTTCTaGTCATCCGGGGAAGCAGCA +
Preference number: 4 (lower is better)
Translates to: FQIVLQRRSQLVSSGSDLRANTF*SSGEAA
Trigger: TGCTGCTTCCCCGGATGAGCAGAAGGTGTTTGCCCT...TAGATCACTCCCAGAAGAGACCAGCTGGGACCTTCTTTGCAGTACAATTTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CCACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGGCTGGGTTAGTAGTTTaGTACTATTGTCAAGACTGT +
Preference number: 4 (lower is better)
Translates to: PLHRAMPQVMRWSVPLALAGLVV*YYCQDC
Trigger: ACAGTCTTGACAATAGTAGCAAACTACTAACCCAGC...CAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp TTTCAAATTGTACTGCAAAGAAGGTCCCAGCTGGTCTCTTCTGGGAGTGATCTACTGTCCACTGCACCGTaGAATGCCACAGGTCATGAG +
Preference number: 4 (lower is better)
Translates to: FQIVLQRRSQLVSSGSDLLSTAP*NATGHE
Trigger: CTCATGACCTGTGGCATTGCACGGTGCAGTGGACAG...TAGATCACTCCCAGAAGAGACCAGCTGGGACCTTCTTTGCAGTACAATTTGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp GAGTGGGGAAATAGCATAGACCGTCATTTAAACCTTCAGACAATTAGTGACTGTCGGCCATGTTGCTGGTaGAGAAACTCCGGCGGACAC +
Preference number: 4 (lower is better)
Translates to: EWGNSIDRHLNLQTISDCRPCCW*RNSGGH
Trigger: GTGTCCGCCGGAGTTTCTCCACCAGCAACATGGCCG...ACAGTCACTAATTGTCTGAAGGTTTAAATGACGGTCTATGCTATTTCCCCACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CAAAATTATGTACGTGACTCGCCTCTTTCTAGTGGACAGTGCTGCTCTGTCTTCGGTTCAGGGTGTCGATaGCCATCTCAAGCTCTACCT +
Preference number: 4 (lower is better)
Translates to: QNYVRDSPLSSGQCCSVFGSGCR*PSQALP
Trigger: AGGTAGAGCTTGAGATGGCCATCGACACCCTGAACC...GAAGACAGAGCAGCACTGTCCACTAGAAAGAGGCGAGTCACGTACATAATTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CAAATTGTACTGCAAAGAAGGTCCCAGCTGGTCTCTTCTGGGAGTGATCTAACTGGTTCAGGGTGTCGATaGCCATCTCAAGCTCTACCT +
Preference number: 4 (lower is better)
Translates to: QIVLQRRSQLVSSGSDLTGSGCR*PSQALP
Trigger: AGGTAGAGCTTGAGATGGCCATCGACACCCTGAACC...AGTTAGATCACTCCCAGAAGAGACCAGCTGGGACCTTCTTTGCAGTACAATTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp TTTAAACTAATGTGGTTGCTAGAAACTTTCAAAATTATGTACGTGACTCGCCTCAGTCCCCTGCCTCGTTaGCCGCCTCCCTCTCCCGGT +
Preference number: 4 (lower is better)
Translates to: FKLMWLLETFKIMYVTRLSPLPR*PPPSPG
Trigger: ACCGGGAGAGGGAGGCGGCCAACGAGGCAGGGGACT...GAGGCGAGTCACGTACATAATTTTGAAAGTTTCTAGCAACCACATTAGTTTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp TTTCAAATTGTACTGCAAAGAAGGTCCCAGCTGGTCTCTTCTGGGAGTGATCTATCTCCTCCTCCTGGCTaGGTGGCATCAGCATCATCA +
Preference number: 4 (lower is better)
Translates to: FQIVLQRRSQLVSSGSDLSPPPG*VASASS
Trigger: TGATGATGCTGATGCCACCCAGCCAGGAGGAGGAGA...TAGATCACTCCCAGAAGAGACCAGCTGGGACCTTCTTTGCAGTACAATTTGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CTTAAGCTGACCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTCCGGCTTCTTTGGCATaGTTTCCTTTACAAGATTAT +
Preference number: 4 (lower is better)
Translates to: LKLTLRLAEDNPFCPLHRPASLA*FPLQDY
Trigger: ATAATCTTGTAAAGGAAACCATGCCAAAGAAGCCGG...ACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGGTCAGCTTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CAAAATTATGTACGTGACTCGCCTCTTTCTAGTGGACAGTGCTGCTCTGTCTTCGGTTCTGCTGGGCCTTaGTTTTGGCTACTTGGATCC +
Preference number: 4 (lower is better)
Translates to: QNYVRDSPLSSGQCCSVFGSAGP*FWLLGS
Trigger: GGATCCAAGTAGCCAAAACCAAGGCCCAGCAGAACC...GAAGACAGAGCAGCACTGTCCACTAGAAAGAGGCGAGTCACGTACATAATTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CAAATTGTACTGCAAAGAAGGTCCCAGCTGGTCTCTTCTGGGAGTGATCTAACTGGTTCTGCTGGGCCTTaGTTTTGGCTACTTGGATCC +
Preference number: 4 (lower is better)
Translates to: QIVLQRRSQLVSSGSDLTGSAGP*FWLLGS
Trigger: GGATCCAAGTAGCCAAAACCAAGGCCCAGCAGAACC...AGTTAGATCACTCCCAGAAGAGACCAGCTGGGACCTTCTTTGCAGTACAATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CAAATTGTACTGCAAAGAAGGTCCCAGCTGGTCTCTTCTGGGAGTGATCTAACTAACGCGTGGTTCTGCTaGGCCTTGGTTTTGGCTACT +
Preference number: 4 (lower is better)
Translates to: QIVLQRRSQLVSSGSDLTNAWFC*ALVLAT
Trigger: AGTAGCCAAAACCAAGGCCCAGCAGAACCACGCGTT...AGTTAGATCACTCCCAGAAGAGACCAGCTGGGACCTTCTTTGCAGTACAATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp TTTCAAATTGTACTGCAAAGAAGGTCCCAGCTGGTCTCTTCTGGGAGTGATCTATCGAGGCCCTACTTCTaGTTCCGCCCTTCTTCCTTG +
Preference number: 4 (lower is better)
Translates to: FQIVLQRRSQLVSSGSDLSRPYF*FRPSSL
Trigger: CAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTCGA...TAGATCACTCCCAGAAGAGACCAGCTGGGACCTTCTTTGCAGTACAATTTGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp TGTCCACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTTTGTCAAAGGTGAAGTaGCCACAGAATCCCAAGAAT +
Preference number: 4 (lower is better)
Translates to: CPLHRAMPQVMRWSVPLALSKVK*PQNPKN
Trigger: ATTCTTGGGATTCTGTGGCCACTTCACCTTTGACAA...AGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGTGGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGTCGTTTGTCAAAGGTGAAGTaGCCACAGAATCCCAAGAAT +
Preference number: 4 (lower is better)
Translates to: HRAMPQVMRWSVPLALCRLSKVK*PQNPKN
Trigger: ATTCTTGGGATTCTGTGGCCACTTCACCTTTGACAA...ACGACACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp GAGTGGGGAAATAGCATAGACCGTCATTTAAACCTTCAGACAATTAGTGACTGTTCTGCTGCTTGGGCTTaGTCTTGGCTGAGAGGTGCG +
Preference number: 4 (lower is better)
Translates to: EWGNSIDRHLNLQTISDCSAAWA*SWLRGA
Trigger: CGCACCTCTCAGCCAAGATCAAGCCCAAGCAGCAGA...ACAGTCACTAATTGTCTGAAGGTTTAAATGACGGTCTATGCTATTTCCCCACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp TTTCAAATTGTACTGCAAAGAAGGTCCCAGCTGGTCTCTTCTGGGAGTGATCTATCTTCATCAGGATCTTaGTCTGATCGGCCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: FQIVLQRRSQLVSSGSDLSSSGS*SDRPGA
Trigger: TGCCCCTGGCCGATCAGATCAAGATCCTGATGAAGA...TAGATCACTCCCAGAAGAGACCAGCTGGGACCTTCTTTGCAGTACAATTTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp GTAACGCTGAGCCCAACAAGATCGCCTTCCTGTAACCATTTGAAGATAGCACCAAAAACCTGTCGATGCTaGTCACTCATGTCTCCAGAC +
Preference number: 4 (lower is better)
Translates to: VTLSPTRSPSCNHLKIAPKTCRC*SLMSPD
Trigger: GTCTGGAGACATGAGTGATCAGCATCGACAGGTTTT...TGGTGCTATCTTCAAATGGTTACAGGAAGGCGATCTTGTTGGGCTCAGCGTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp CAAATTGTACTGCAAAGAAGGTCCCAGCTGGTCTCTTCTGGGAGTGATCTAACTTCTTCTCCACACTCTTaGGTCAACCGAGACTGGATC +
Preference number: 4 (lower is better)
Translates to: QIVLQRRSQLVSSGSDLTSSPHS*VNRDWI
Trigger: GATCCAGTCTCGGTTGACTCAAGAGTGTGGAGAAGA...AGTTAGATCACTCCCAGAAGAGACCAGCTGGGACCTTCTTTGCAGTACAATTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299853.10
ENST00000418581.6
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CAAATTGTACTGCAAAGAAGGTCCCAGCTGGTCTCTTCTGGGAGTGATCTAACTGAAGAGCAGAAGGTCTaGTTGTCCATCAGCTTCGAG +
Preference number: 4 (lower is better)
Translates to: QIVLQRRSQLVSSGSDLTEEQKV*LSISFE
Trigger: CTCGAAGCTGATGGACAAGCAGACCTTCTGCTCTTC...AGTTAGATCACTCCCAGAAGAGACCAGCTGGGACCTTCTTTGCAGTACAATTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp AGAAACTTTCAAAATTATGTACGTGACTCGCCTCTTTCTAGTGGACAGTGCTGCGCCGCAGCTGCAGGATaGCATGTAAAGGTGTCAGGT +
Preference number: 4 (lower is better)
Translates to: RNFQNYVRDSPLSSGQCCAAAAG*HVKVSG
Trigger: ACCTGACACCTTTACATGGCATCCTGCAGCTGCGGC...GCAGCACTGTCCACTAGAAAGAGGCGAGTCACGTACATAATTTTGAAAGTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp AGAAACTTTCAAAATTATGTACGTGACTCGCCTCTTTCTAGTGGACAGTGCTGCAAGCTGGGCCGCAGCTaGAGGATGCCATGTAAAGGT +
Preference number: 4 (lower is better)
Translates to: RNFQNYVRDSPLSSGQCCKLGRS*RMPCKG
Trigger: ACCTTTACATGGCATCCTGCAGCTGCGGCCCAGCTT...GCAGCACTGTCCACTAGAAAGAGGCGAGTCACGTACATAATTTTGAAAGTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp TTTCAAATTGTACTGCAAAGAAGGTCCCAGCTGGTCTCTTCTGGGAGTGATCTATGGACCACATCCGGGTaGTTCTTGATGAACTCCCCA +
Preference number: 4 (lower is better)
Translates to: FQIVLQRRSQLVSSGSDLWTTSG*FLMNSP
Trigger: TGGGGAGTTCATCAAGAAGCACCCGGATGTGGTCCA...TAGATCACTCCCAGAAGAGACCAGCTGGGACCTTCTTTGCAGTACAATTTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp GAGTGGGGAAATAGCATAGACCGTCATTTAAACCTTCAGACAATTAGTGACTGTAAAGGCACCAGTATCTaGTTGCAACCGGCGGCCAGC +
Preference number: 4 (lower is better)
Translates to: EWGNSIDRHLNLQTISDCKGTSI*LQPAAS
Trigger: GCTGGCCGCCGGTTGCAAGCAGATACTGGTGCCTTT...ACAGTCACTAATTGTCTGAAGGTTTAAATGACGGTCTATGCTATTTCCCCACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp AGAAACTTTCAAAATTATGTACGTGACTCGCCTCTTTCTAGTGGACAGTGCTGCAGGGCAAACACCTTCTaGTCATCCGGGGAAGCAGCA +
Preference number: 4 (lower is better)
Translates to: RNFQNYVRDSPLSSGQCCRANTF*SSGEAA
Trigger: TGCTGCTTCCCCGGATGAGCAGAAGGTGTTTGCCCT...GCAGCACTGTCCACTAGAAAGAGGCGAGTCACGTACATAATTTTGAAAGTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp GTCGAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGTACATCCTTGATCAATaGCTTAGTGATTCTATAGCT +
Preference number: 4 (lower is better)
Translates to: VEALLLVPPFFLGLRFAGYILDQ*LSDSIA
Trigger: AGCTATAGAATCACTAAGGCATTGATCAAGGATGTA...CCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTCGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp AAGCTGACCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCATACATCCTTGATCAATaGCTTAGTGATTCTATAGCT +
Preference number: 4 (lower is better)
Translates to: KLTLRLAEDNPFCPLHRAYILDQ*LSDSIA
Trigger: AGCTATAGAATCACTAAGGCATTGATCAAGGATGTA...TGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGGTCAGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CAAATTGTACTGCAAAGAAGGTCCCAGCTGGTCTCTTCTGGGAGTGATCTAACTAGCTCTACCTTCTGCTaGTTGGGCTTGATCTCCTGT +
Preference number: 4 (lower is better)
Translates to: QIVLQRRSQLVSSGSDLTSSTFC*LGLISC
Trigger: ACAGGAGATCAAGCCCAAGCAGCAGAAGGTAGAGCT...AGTTAGATCACTCCCAGAAGAGACCAGCTGGGACCTTCTTTGCAGTACAATTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418581.6
CDS-3UTR CCA 90 bp TTTAAACTAATGTGGTTGCTAGAAACTTTCAAAATTATGTACGTGACTCGCCTCGGCAGCGTGCGCAGCTaGGCCATCGACAGGACGTTG +
Preference number: 4 (lower is better)
Translates to: FKLMWLLETFKIMYVTRLGSVRS*AIDRTL
Trigger: CAACGTCCTGTCGATGGCCCAGCTGCGCACGCTGCC...GAGGCGAGTCACGTACATAATTTTGAAAGTTTCTAGCAACCACATTAGTTTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp GAGTGGGGAAATAGCATAGACCGTCATTTAAACCTTCAGACAATTAGTGACTGTCCTCGGCGCAGAGTTTaGTCACGGTTGCCACCTCTT +
Preference number: 4 (lower is better)
Translates to: EWGNSIDRHLNLQTISDCPRRRV*SRLPPL
Trigger: AAGAGGTGGCAACCGTGACCAAACTCTGCGCCGAGG...ACAGTCACTAATTGTCTGAAGGTTTAAATGACGGTCTATGCTATTTCCCCACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp GAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGTTACCGGCTTCTTTGGCATaGTTTCCTTTACAAGATTAT +
Preference number: 4 (lower is better)
Translates to: EALLLVPPFFLGLRFAGLPASLA*FPLQDY
Trigger: ATAATCTTGTAAAGGAAACCATGCCAAAGAAGCCGG...TAACCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGTCGTCCGGCTTCTTTGGCATaGTTTCCTTTACAAGATTAT +
Preference number: 4 (lower is better)
Translates to: HRAMPQVMRWSVPLALCRPASLA*FPLQDY
Trigger: ATAATCTTGTAAAGGAAACCATGCCAAAGAAGCCGG...ACGACACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp AACCATGATTTTTATCATCCTGCCCATGTCAGTATACACTCTCTTTATTATGAGCGAGAGGCAGCCCGTTaGCCAGCTTGCTGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: NHDFYHPAHVSIHSLYYEREAAR*PACCGG
Trigger: GCCTCCACAGCAAGCTGGCCAACGGGCTGCCTCTCG...CTCATAATAAAGAGAGTGTATACTGACATGGGCAGGATGATAAAAATCATGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000299853.10
ENST00000418581.6
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp AGAAACTTTCAAAATTATGTACGTGACTCGCCTCTTTCTAGTGGACAGTGCTGCTCGAGGCCCTACTTCTaGTTCCGCCCTTCTTCCTTG +
Preference number: 4 (lower is better)
Translates to: RNFQNYVRDSPLSSGQCCSRPYF*FRPSSL
Trigger: CAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTCGA...GCAGCACTGTCCACTAGAAAGAGGCGAGTCACGTACATAATTTTGAAAGTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp CAAAATTATGTACGTGACTCGCCTCTTTCTAGTGGACAGTGCTGCTCTGTCTTCGGACGCACAGGGTACTaGAATAGATACAGCTTTTCC +
Preference number: 4 (lower is better)
Translates to: QNYVRDSPLSSGQCCSVFGRTGY*NRYSFS
Trigger: GGAAAAGCTGTATCTATTTCAGTACCCTGTGCGTCC...GAAGACAGAGCAGCACTGTCCACTAGAAAGAGGCGAGTCACGTACATAATTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp GAGTGGGGAAATAGCATAGACCGTCATTTAAACCTTCAGACAATTAGTGACTGTGGGCTTGATCTTGGCTaGGAGGTGCGGAATGTCATC +
Preference number: 4 (lower is better)
Translates to: EWGNSIDRHLNLQTISDCGLDLG*EVRNVI
Trigger: GATGACATTCCGCACCTCTCAGCCAAGATCAAGCCC...ACAGTCACTAATTGTCTGAAGGTTTAAATGACGGTCTATGCTATTTCCCCACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp TTTCAAATTGTACTGCAAAGAAGGTCCCAGCTGGTCTCTTCTGGGAGTGATCTAGGTTGTTGTCAAAGGTaGAGTGGCCACAGAATCCCA +
Preference number: 4 (lower is better)
Translates to: FQIVLQRRSQLVSSGSDLGCCQR*SGHRIP
Trigger: TGGGATTCTGTGGCCACTTCACCTTTGACAACAACC...TAGATCACTCCCAGAAGAGACCAGCTGGGACCTTCTTTGCAGTACAATTTGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp AGAAACTTTCAAAATTATGTACGTGACTCGCCTCTTTCTAGTGGACAGTGCTGCCAATCTGCTCCCCTTTaGTGCGGCAATAGTTGGGGT +
Preference number: 4 (lower is better)
Translates to: RNFQNYVRDSPLSSGQCCQSAPL*CGNSWG
Trigger: ACCCCAACTATTGCCGCAGCAAAGGGGAGCAGATTG...GCAGCACTGTCCACTAGAAAGAGGCGAGTCACGTACATAATTTTGAAAGTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp GAGTGGGGAAATAGCATAGACCGTCATTTAAACCTTCAGACAATTAGTGACTGTCTCACCACGGCCATGTaGTCCAGGAAGTCCTTCACA +
Preference number: 4 (lower is better)
Translates to: EWGNSIDRHLNLQTISDCLTTAM*SRKSFT
Trigger: TGTGAAGGACTTCCTGGAGCACATGGCCGTGGTGAG...ACAGTCACTAATTGTCTGAAGGTTTAAATGACGGTCTATGCTATTTCCCCACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp TTTAAACTAATGTGGTTGCTAGAAACTTTCAAAATTATGTACGTGACTCGCCTCGTCCACAGCATGTGCTaGCGCTGGACCACATCCGGG +
Preference number: 4 (lower is better)
Translates to: FKLMWLLETFKIMYVTRLVHSMC*RWTTSG
Trigger: CCCGGATGTGGTCCAGCGGCAGCACATGCTGTGGAC...GAGGCGAGTCACGTACATAATTTTGAAAGTTTCTAGCAACCACATTAGTTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp AACCATGATTTTTATCATCCTGCCCATGTCAGTATACACTCTCTTTATTATGAGGCACCAGTATCTGCTTaGAACCGGCGGCCAGCACCG +
Preference number: 4 (lower is better)
Translates to: NHDFYHPAHVSIHSLYYEAPVSA*NRRPAP
Trigger: CGGTGCTGGCCGCCGGTTGCAAGCAGATACTGGTGC...CTCATAATAAAGAGAGTGTATACTGACATGGGCAGGATGATAAAAATCATGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000299853.10
ENST00000418581.6
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp GAGTGGGGAAATAGCATAGACCGTCATTTAAACCTTCAGACAATTAGTGACTGTAGGGCAAACACCTTCTaGTCATCCGGGGAAGCAGCA +
Preference number: 4 (lower is better)
Translates to: EWGNSIDRHLNLQTISDCRANTF*SSGEAA
Trigger: TGCTGCTTCCCCGGATGAGCAGAAGGTGTTTGCCCT...ACAGTCACTAATTGTCTGAAGGTTTAAATGACGGTCTATGCTATTTCCCCACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CAAATTGTACTGCAAAGAAGGTCCCAGCTGGTCTCTTCTGGGAGTGATCTAACTATGGTCAGTTCCTCTTaGTCTGTGTCGTCTGAAGCA +
Preference number: 4 (lower is better)
Translates to: QIVLQRRSQLVSSGSDLTMVSSS*SVSSEA
Trigger: TGCTTCAGACGACACAGAGCAAGAGGAACTGACCAT...AGTTAGATCACTCCCAGAAGAGACCAGCTGGGACCTTCTTTGCAGTACAATTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp GTTCCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGTACATCCTTGATCAATaGCTTAGTGATTCTATAGCT +
Preference number: 4 (lower is better)
Translates to: VPLALCRLKQVEALLLVPYILDQ*LSDSIA
Trigger: AGCTATAGAATCACTAAGGCATTGATCAAGGATGTA...CGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp AGAAACTTTCAAAATTATGTACGTGACTCGCCTCTTTCTAGTGGACAGTGCTGCGTAGGTCATCGAGGCTaGACGCACAGGGTACTGAAA +
Preference number: 4 (lower is better)
Translates to: RNFQNYVRDSPLSSGQCCVGHRG*THRVLK
Trigger: TTTCAGTACCCTGTGCGTCCAGCCTCGATGACCTAC...GCAGCACTGTCCACTAGAAAGAGGCGAGTCACGTACATAATTTTGAAAGTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp TTTAAACTAATGTGGTTGCTAGAAACTTTCAAAATTATGTACGTGACTCGCCTCTCGAGGAATACGTGCTaGTCTCGTCGGCGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: FKLMWLLETFKIMYVTRLSRNTC*SRRRRP
Trigger: GGGCCTGCGCCGACGAGACCAGCACGTATTCCTCGA...GAGGCGAGTCACGTACATAATTTTGAAAGTTTCTAGCAACCACATTAGTTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp AACCATGATTTTTATCATCCTGCCCATGTCAGTATACACTCTCTTTATTATGAGTCGAGGAATACGTGCTaGTCTCGTCGGCGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: NHDFYHPAHVSIHSLYYESRNTC*SRRRRP
Trigger: GGGCCTGCGCCGACGAGACCAGCACGTATTCCTCGA...CTCATAATAAAGAGAGTGTATACTGACATGGGCAGGATGATAAAAATCATGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000299853.10
ENST00000418581.6
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp GAGTGGGGAAATAGCATAGACCGTCATTTAAACCTTCAGACAATTAGTGACTGTCTCCTCCTGGCTGGGTaGCATCAGCATCATCAGGTA +
Preference number: 4 (lower is better)
Translates to: EWGNSIDRHLNLQTISDCLLLAG*HQHHQV
Trigger: TACCTGATGATGCTGATGCCACCCAGCCAGGAGGAG...ACAGTCACTAATTGTCTGAAGGTTTAAATGACGGTCTATGCTATTTCCCCACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp GAGTGGGGAAATAGCATAGACCGTCATTTAAACCTTCAGACAATTAGTGACTGTACCACCCAGTTCCCTTaGACCAACATCGCCACCTTC +
Preference number: 4 (lower is better)
Translates to: EWGNSIDRHLNLQTISDCTTQFP*TNIATF
Trigger: GAAGGTGGCGATGTTGGTCCAAGGGAACTGGGTGGT...ACAGTCACTAATTGTCTGAAGGTTTAAATGACGGTCTATGCTATTTCCCCACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp GCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGTTAGTACCGGCTTCTTTGGCATaGTTTCCTTTACAAGATTAT +
Preference number: 4 (lower is better)
Translates to: ALLLVPPFFLGLRFAGLVPASLA*FPLQDY
Trigger: ATAATCTTGTAAAGGAAACCATGCCAAAGAAGCCGG...TACTAACCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp TTTAAACTAATGTGGTTGCTAGAAACTTTCAAAATTATGTACGTGACTCGCCTCGCTACTTGGATCCGCTaGTCCCCACAGACCAGCCCG +
Preference number: 4 (lower is better)
Translates to: FKLMWLLETFKIMYVTRLATWIR*SPQTSP
Trigger: CGGGCTGGTCTGTGGGGACCAGCGGATCCAAGTAGC...GAGGCGAGTCACGTACATAATTTTGAAAGTTTCTAGCAACCACATTAGTTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp AACCATGATTTTTATCATCCTGCCCATGTCAGTATACACTCTCTTTATTATGAGTGCTGTGGAGGCCGCTaGGGGAAGTGTCCATGGGCT +
Preference number: 4 (lower is better)
Translates to: NHDFYHPAHVSIHSLYYECCGGR*GKCPWA
Trigger: AGCCCATGGACACTTCCCCCAGCGGCCTCCACAGCA...CTCATAATAAAGAGAGTGTATACTGACATGGGCAGGATGATAAAAATCATGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000299853.10
ENST00000418581.6
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp TTTCAAATTGTACTGCAAAGAAGGTCCCAGCTGGTCTCTTCTGGGAGTGATCTAAAAGAAGGTCCCAGCTaGTCTCTTCTGGGAGTGATC +
Preference number: 4 (lower is better)
Translates to: FQIVLQRRSQLVSSGSDLKEGPS*SLLGVI
Trigger: GATCACTCCCAGAAGAGACCAGCTGGGACCTTCTTT...TAGATCACTCCCAGAAGAGACCAGCTGGGACCTTCTTTGCAGTACAATTTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp AACCATGATTTTTATCATCCTGCCCATGTCAGTATACACTCTCTTTATTATGAGGGGCACAGCAGGTACTaGCGCTCATGCTCAGAGCGA +
Preference number: 4 (lower is better)
Translates to: NHDFYHPAHVSIHSLYYEGHSRY*RSCSER
Trigger: TCGCTCTGAGCATGAGCGTCAGTACCTGCTGTGCCC...CTCATAATAAAGAGAGTGTATACTGACATGGGCAGGATGATAAAAATCATGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000299853.10
ENST00000418581.6
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp GTAACGCTGAGCCCAACAAGATCGCCTTCCTGTAACCATTTGAAGATAGCACCAAGTTGGCAAAAGGCATaGCCTTCACATTCTTCATCA +
Preference number: 4 (lower is better)
Translates to: VTLSPTRSPSCNHLKIAPSWQKA*PSHSSS
Trigger: TGATGAAGAATGTGAAGGTCATGCCTTTTGCCAACT...TGGTGCTATCTTCAAATGGTTACAGGAAGGCGATCTTGTTGGGCTCAGCGTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp GAGTGGGGAAATAGCATAGACCGTCATTTAAACCTTCAGACAATTAGTGACTGTCTAACTAACTTAAGCTaGCCCTGCGACTGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: EWGNSIDRHLNLQTISDCLTNLS*PCDWLR
Trigger: CCTCAGCCAGTCGCAGGGTCAGCTTAAGTTAGTTAG...ACAGTCACTAATTGTCTGAAGGTTTAAATGACGGTCTATGCTATTTCCCCACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp TTTAAACTAATGTGGTTGCTAGAAACTTTCAAAATTATGTACGTGACTCGCCTCGCTTCGAGGAATACGTaGTGGTCTCGTCGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: FKLMWLLETFKIMYVTRLASRNT*WSRRRR
Trigger: CCTGCGCCGACGAGACCAGCACGTATTCCTCGAAGC...GAGGCGAGTCACGTACATAATTTTGAAAGTTTCTAGCAACCACATTAGTTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp TGTCCACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTTACATCCTTGATCAATaGCTTAGTGATTCTATAGCT +
Preference number: 4 (lower is better)
Translates to: CPLHRAMPQVMRWSVPLAYILDQ*LSDSIA
Trigger: AGCTATAGAATCACTAAGGCATTGATCAAGGATGTA...AGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGTGGACA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp AGAAACTTTCAAAATTATGTACGTGACTCGCCTCTTTCTAGTGGACAGTGCTGCAACGGGATGTGTTACTaGTGGTCTGGGAAGAGCAGA +
Preference number: 4 (lower is better)
Translates to: RNFQNYVRDSPLSSGQCCNGMCY*WSGKSR
Trigger: TCTGCTCTTCCCAGACCACCAGTAACACATCCCGTT...GCAGCACTGTCCACTAGAAAGAGGCGAGTCACGTACATAATTTTGAAAGTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp AACCATGATTTTTATCATCCTGCCCATGTCAGTATACACTCTCTTTATTATGAGCGCCGCTGTGAGGGCTaGACGAGTCCTTGGGGTATA +
Preference number: 4 (lower is better)
Translates to: NHDFYHPAHVSIHSLYYERRCEG*TSPWGI
Trigger: TATACCCCAAGGACTCGTCCAGCCCTCACAGCGGCG...CTCATAATAAAGAGAGTGTATACTGACATGGGCAGGATGATAAAAATCATGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000299853.10
ENST00000418581.6
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp TTTCAAATTGTACTGCAAAGAAGGTCCCAGCTGGTCTCTTCTGGGAGTGATCTAAGACTTTTTCCAGTTTaGCCTGGATACCCGTCCACA +
Preference number: 4 (lower is better)
Translates to: FQIVLQRRSQLVSSGSDLRLFPV*PGYPST
Trigger: TGTGGACGGGTATCCAGGCCAAACTGGAAAAAGTCT...TAGATCACTCCCAGAAGAGACCAGCTGGGACCTTCTTTGCAGTACAATTTGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp CAAATTGTACTGCAAAGAAGGTCCCAGCTGGTCTCTTCTGGGAGTGATCTAACTGGAGCACTTATGATGTaGCTAGTCCAAACTGAGTGT +
Preference number: 4 (lower is better)
Translates to: QIVLQRRSQLVSSGSDLTGALMM*LVQTEC
Trigger: ACACTCAGTTTGGACTAGCCACATCATAAGTGCTCC...AGTTAGATCACTCCCAGAAGAGACCAGCTGGGACCTTCTTTGCAGTACAATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp AACCATGATTTTTATCATCCTGCCCATGTCAGTATACACTCTCTTTATTATGAGTTCCGCCTCATCCTGTaGAGAGTCCCCTGCCTCGTT +
Preference number: 4 (lower is better)
Translates to: NHDFYHPAHVSIHSLYYEFRLIL*RVPCLV
Trigger: AACGAGGCAGGGGACTCTTCACAGGATGAGGCGGAA...CTCATAATAAAGAGAGTGTATACTGACATGGGCAGGATGATAAAAATCATGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000299853.10
ENST00000418581.6
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp GAGTGGGGAAATAGCATAGACCGTCATTTAAACCTTCAGACAATTAGTGACTGTAGCTCTACCTTCTGCTaGTTGGGCTTGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: EWGNSIDRHLNLQTISDCSSTFC*LGLILA
Trigger: AGCCAAGATCAAGCCCAAGCAGCAGAAGGTAGAGCT...ACAGTCACTAATTGTCTGAAGGTTTAAATGACGGTCTATGCTATTTCCCCACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp GAGTGGGGAAATAGCATAGACCGTCATTTAAACCTTCAGACAATTAGTGACTGTGAGTTTGGTCACGGTTaGCACCTCTTTCCTAACCAC +
Preference number: 4 (lower is better)
Translates to: EWGNSIDRHLNLQTISDCEFGHG*HLFPNH
Trigger: GTGGTTAGGAAAGAGGTGGCAACCGTGACCAAACTC...ACAGTCACTAATTGTCTGAAGGTTTAAATGACGGTCTATGCTATTTCCCCACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp AGAAACTTTCAAAATTATGTACGTGACTCGCCTCTTTCTAGTGGACAGTGCTGCATGGTCAGTTCCTCTTaGTCTGTGTCGTCTGAAGCA +
Preference number: 4 (lower is better)
Translates to: RNFQNYVRDSPLSSGQCCMVSSS*SVSSEA
Trigger: TGCTTCAGACGACACAGAGCAAGAGGAACTGACCAT...GCAGCACTGTCCACTAGAAAGAGGCGAGTCACGTACATAATTTTGAAAGTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp TTTAAACTAATGTGGTTGCTAGAAACTTTCAAAATTATGTACGTGACTCGCCTCAACATCGCCACCTTCTaGATGCCCCGCAGAACAGCC +
Preference number: 4 (lower is better)
Translates to: FKLMWLLETFKIMYVTRLNIATF*MPRRTA
Trigger: GGCTGTTCTGCGGGGCATCCAGAAGGTGGCGATGTT...GAGGCGAGTCACGTACATAATTTTGAAAGTTTCTAGCAACCACATTAGTTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp AACCATGATTTTTATCATCCTGCCCATGTCAGTATACACTCTCTTTATTATGAGCCTCGGCGCAGAGTTTaGTCACGGTTGCCACCTCTT +
Preference number: 4 (lower is better)
Translates to: NHDFYHPAHVSIHSLYYEPRRRV*SRLPPL
Trigger: AAGAGGTGGCAACCGTGACCAAACTCTGCGCCGAGG...CTCATAATAAAGAGAGTGTATACTGACATGGGCAGGATGATAAAAATCATGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000299853.10
ENST00000418581.6
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp TTTAAACTAATGTGGTTGCTAGAAACTTTCAAAATTATGTACGTGACTCGCCTCCAGGTACTCACTGGGTaGCTTGACGAGCTCCGTGTT +
Preference number: 4 (lower is better)
Translates to: FKLMWLLETFKIMYVTRLQVLTG*LDELRV
Trigger: AACACGGAGCTCGTCAAGTCACCCAGTGAGTACCTG...GAGGCGAGTCACGTACATAATTTTGAAAGTTTCTAGCAACCACATTAGTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp TTTCAAATTGTACTGCAAAGAAGGTCCCAGCTGGTCTCTTCTGGGAGTGATCTAGTCCAAACTGAGTGTTaGGGAAAGTGTAAAATGCCA +
Preference number: 4 (lower is better)
Translates to: FQIVLQRRSQLVSSGSDLVQTEC*GKCKMP
Trigger: TGGCATTTTACACTTTCCTCAACACTCAGTTTGGAC...TAGATCACTCCCAGAAGAGACCAGCTGGGACCTTCTTTGCAGTACAATTTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp GAGTGGGGAAATAGCATAGACCGTCATTTAAACCTTCAGACAATTAGTGACTGTTCAAGCTCTACCTTCTaGTGCTTGGGCTTGATCTTG +
Preference number: 4 (lower is better)
Translates to: EWGNSIDRHLNLQTISDCSSSTF*CLGLIL
Trigger: CAAGATCAAGCCCAAGCAGCAGAAGGTAGAGCTTGA...ACAGTCACTAATTGTCTGAAGGTTTAAATGACGGTCTATGCTATTTCCCCACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp AACCATGATTTTTATCATCCTGCCCATGTCAGTATACACTCTCTTTATTATGAGCTCACCACGGCCATGTaGTCCAGGAAGTCCTTCACA +
Preference number: 4 (lower is better)
Translates to: NHDFYHPAHVSIHSLYYELTTAM*SRKSFT
Trigger: TGTGAAGGACTTCCTGGAGCACATGGCCGTGGTGAG...CTCATAATAAAGAGAGTGTATACTGACATGGGCAGGATGATAAAAATCATGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000299853.10
ENST00000418581.6
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp CAAATTGTACTGCAAAGAAGGTCCCAGCTGGTCTCTTCTGGGAGTGATCTAACTGCTGGGTTAGTAGTTTaGTACTATTGTCAAGACTGT +
Preference number: 4 (lower is better)
Translates to: QIVLQRRSQLVSSGSDLTAGLVV*YYCQDC
Trigger: ACAGTCTTGACAATAGTAGCAAACTACTAACCCAGC...AGTTAGATCACTCCCAGAAGAGACCAGCTGGGACCTTCTTTGCAGTACAATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp TTTAAACTAATGTGGTTGCTAGAAACTTTCAAAATTATGTACGTGACTCGCCTCATCCCTTCTGTCCACTaGACCGTGCAATGCCACAGG +
Preference number: 4 (lower is better)
Translates to: FKLMWLLETFKIMYVTRLIPSVH*TVQCHR
Trigger: CCTGTGGCATTGCACGGTGCAGTGGACAGAAGGGAT...GAGGCGAGTCACGTACATAATTTTGAAAGTTTCTAGCAACCACATTAGTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp TTTAAACTAATGTGGTTGCTAGAAACTTTCAAAATTATGTACGTGACTCGCCTCTCTTTCTCCTCCTCCTaGCTGGGTGGCATCAGCATC +
Preference number: 4 (lower is better)
Translates to: FKLMWLLETFKIMYVTRLSFSSS*LGGISI
Trigger: GATGCTGATGCCACCCAGCCAGGAGGAGGAGAAAGA...GAGGCGAGTCACGTACATAATTTTGAAAGTTTCTAGCAACCACATTAGTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp AACCATGATTTTTATCATCCTGCCCATGTCAGTATACACTCTCTTTATTATGAGGCTGGGCCTTGGTTTTaGCTACTTGGATCCGCTGGT +
Preference number: 4 (lower is better)
Translates to: NHDFYHPAHVSIHSLYYEAGPWF*LLGSAG
Trigger: ACCAGCGGATCCAAGTAGCCAAAACCAAGGCCCAGC...CTCATAATAAAGAGAGTGTATACTGACATGGGCAGGATGATAAAAATCATGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000299853.10
ENST00000418581.6
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp TTTAAACTAATGTGGTTGCTAGAAACTTTCAAAATTATGTACGTGACTCGCCTCGCTGGGCCTTGGTTTTaGCTACTTGGATCCGCTGGT +
Preference number: 4 (lower is better)
Translates to: FKLMWLLETFKIMYVTRLAGPWF*LLGSAG
Trigger: ACCAGCGGATCCAAGTAGCCAAAACCAAGGCCCAGC...GAGGCGAGTCACGTACATAATTTTGAAAGTTTCTAGCAACCACATTAGTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp TTTCAAATTGTACTGCAAAGAAGGTCCCAGCTGGTCTCTTCTGGGAGTGATCTATTGTCAAAGGTGAAGTaGCCACAGAATCCCAAGAAT +
Preference number: 4 (lower is better)
Translates to: FQIVLQRRSQLVSSGSDLLSKVK*PQNPKN
Trigger: ATTCTTGGGATTCTGTGGCCACTTCACCTTTGACAA...TAGATCACTCCCAGAAGAGACCAGCTGGGACCTTCTTTGCAGTACAATTTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp TTTAAACTAATGTGGTTGCTAGAAACTTTCAAAATTATGTACGTGACTCGCCTCTCTTCATCAGGATCTTaGTCTGATCGGCCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: FKLMWLLETFKIMYVTRLSSSGS*SDRPGA
Trigger: TGCCCCTGGCCGATCAGATCAAGATCCTGATGAAGA...GAGGCGAGTCACGTACATAATTTTGAAAGTTTCTAGCAACCACATTAGTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp AACCATGATTTTTATCATCCTGCCCATGTCAGTATACACTCTCTTTATTATGAGGTGTTACTGGTGGTCTaGGAAGAGCAGAAGGTCTGC +
Preference number: 4 (lower is better)
Translates to: NHDFYHPAHVSIHSLYYEVLLVV*EEQKVC
Trigger: GCAGACCTTCTGCTCTTCCCAGACCACCAGTAACAC...CTCATAATAAAGAGAGTGTATACTGACATGGGCAGGATGATAAAAATCATGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000299853.10
ENST00000418581.6
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp TTTAAACTAATGTGGTTGCTAGAAACTTTCAAAATTATGTACGTGACTCGCCTCGTGTTACTGGTGGTCTaGGAAGAGCAGAAGGTCTGC +
Preference number: 4 (lower is better)
Translates to: FKLMWLLETFKIMYVTRLVLLVV*EEQKVC
Trigger: GCAGACCTTCTGCTCTTCCCAGACCACCAGTAACAC...GAGGCGAGTCACGTACATAATTTTGAAAGTTTCTAGCAACCACATTAGTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp TTTAAACTAATGTGGTTGCTAGAAACTTTCAAAATTATGTACGTGACTCGCCTCTTTTCCAGTTTGGCCTaGATACCCGTCCACAGCATG +
Preference number: 4 (lower is better)
Translates to: FKLMWLLETFKIMYVTRLFSSLA*IPVHSM
Trigger: CATGCTGTGGACGGGTATCCAGGCCAAACTGGAAAA...GAGGCGAGTCACGTACATAATTTTGAAAGTTTCTAGCAACCACATTAGTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp AACCATGATTTTTATCATCCTGCCCATGTCAGTATACACTCTCTTTATTATGAGAAAGAAGGTCCCAGCTaGTCTCTTCTGGGAGTGATC +
Preference number: 4 (lower is better)
Translates to: NHDFYHPAHVSIHSLYYEKEGPS*SLLGVI
Trigger: GATCACTCCCAGAAGAGACCAGCTGGGACCTTCTTT...CTCATAATAAAGAGAGTGTATACTGACATGGGCAGGATGATAAAAATCATGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000299853.10
ENST00000418581.6
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp GAGTGGGGAAATAGCATAGACCGTCATTTAAACCTTCAGACAATTAGTGACTGTTTGTCAAAGGTGAAGTaGCCACAGAATCCCAAGAAT +
Preference number: 4 (lower is better)
Translates to: EWGNSIDRHLNLQTISDCLSKVK*PQNPKN
Trigger: ATTCTTGGGATTCTGTGGCCACTTCACCTTTGACAA...ACAGTCACTAATTGTCTGAAGGTTTAAATGACGGTCTATGCTATTTCCCCACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR TCA 90 bp AACCATGATTTTTATCATCCTGCCCATGTCAGTATACACTCTCTTTATTATGAGAAAACCTGTCGATGCTaGTCACTCATGTCTCCAGAC +
Preference number: 4 (lower is better)
Translates to: NHDFYHPAHVSIHSLYYEKTCRC*SLMSPD
Trigger: GTCTGGAGACATGAGTGATCAGCATCGACAGGTTTT...CTCATAATAAAGAGAGTGTATACTGACATGGGCAGGATGATAAAAATCATGGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000299853.10
ENST00000418581.6
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp TTTAAACTAATGTGGTTGCTAGAAACTTTCAAAATTATGTACGTGACTCGCCTCGATCTCCTGTACAACTaGGTCATCCTCTTCATTGGC +
Preference number: 4 (lower is better)
Translates to: FKLMWLLETFKIMYVTRLDLLYN*VILFIG
Trigger: GCCAATGAAGAGGATGACCCAGTTGTACAGGAGATC...GAGGCGAGTCACGTACATAATTTTGAAAGTTTCTAGCAACCACATTAGTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299853.10
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp TTTAAACTAATGTGGTTGCTAGAAACTTTCAAAATTATGTACGTGACTCGCCTCAGACTTTTTCCAGTTTaGCCTGGATACCCGTCCACA +
Preference number: 4 (lower is better)
Translates to: FKLMWLLETFKIMYVTRLRLFPV*PGYPST
Trigger: TGTGGACGGGTATCCAGGCCAAACTGGAAAAAGTCT...GAGGCGAGTCACGTACATAATTTTGAAAGTTTCTAGCAACCACATTAGTTTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp AACCATGATTTTTATCATCCTGCCCATGTCAGTATACACTCTCTTTATTATGAGGGAGCACTTATGATGTaGCTAGTCCAAACTGAGTGT +
Preference number: 4 (lower is better)
Translates to: NHDFYHPAHVSIHSLYYEGALMM*LVQTEC
Trigger: ACACTCAGTTTGGACTAGCCACATCATAAGTGCTCC...CTCATAATAAAGAGAGTGTATACTGACATGGGCAGGATGATAAAAATCATGGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR GCA 90 bp TTTAAACTAATGTGGTTGCTAGAAACTTTCAAAATTATGTACGTGACTCGCCTCGCTGGGTTAGTAGTTTaGTACTATTGTCAAGACTGT +
Preference number: 4 (lower is better)
Translates to: FKLMWLLETFKIMYVTRLAGLVV*YYCQDC
Trigger: ACAGTCTTGACAATAGTAGCAAACTACTAACCCAGC...GAGGCGAGTCACGTACATAATTTTGAAAGTTTCTAGCAACCACATTAGTTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CCA 90 bp AACCATGATTTTTATCATCCTGCCCATGTCAGTATACACTCTCTTTATTATGAGCCGGCTTCTTTGGCATaGTTTCCTTTACAAGATTAT +
Preference number: 4 (lower is better)
Translates to: NHDFYHPAHVSIHSLYYEPASLA*FPLQDY
Trigger: ATAATCTTGTAAAGGAAACCATGCCAAAGAAGCCGG...CTCATAATAAAGAGAGTGTATACTGACATGGGCAGGATGATAAAAATCATGGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000299853.10
ENST00000418581.6
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS GCA 90 bp CGGCGCTGGCGGGCCTGCTCTGACTCCGGCCGGGAGAACCGCACCTaGGGTGGGAAGGGGAAGAGGTCATACCGTCAGGCCTGTGACCCT +
Preference number: 5 (lower is better)
Translates to: RRWRACSDSGRENRT*GGKGKRSYRQACDP
Trigger: AGGGTCACAGGCCTGACGGTATGACCTCTTCCCCTTCCCACCGCAGGTGCGGTTCTCCCGGCCGGAGTCAGAGCAGGCCCGCCAGCGCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569757.1
CDS-3UTR CAA 90 bp CCGCAGCCCGCCCGAGAGGCAGCCCGTTGGCCAGCTTGCTGTGGAGGCCGCTGGTCCTCGGCGCAGAGTTaGGTCACGGTTGCCACCTCT +
Preference number: 5 (lower is better)
Translates to: PQPAREAARWPACCGGRWSSAQS*VTVATS
Trigger: AGAGGTGGCAACCGTGACCAAACTCTGCGCCGAGGA...CCAGCGGCCTCCACAGCAAGCTGGCCAACGGGCTGCCTCTCGGGCGGGCTGCGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564750.5
CDS TCA 90 bp GCCAGGGCCTGTGGCCACAGCGCACCCCACCCCCTAGACACTTTCTaGAGTGCCACAGCCAGGGACCAAGGCCGCAGGGCAGCCTACGCG +
Preference number: 5 (lower is better)
Translates to: ARACGHSAPHPLDTF*SATARDQGRRAAYA
Trigger: CGCGTAGGCTGCCCTGCGGCCTTGGTCCCTGGCTGTGGCACTTCAGAAAGTGTCTAGGGGGTGGGGTGCGCTGTGGCCACAGGCCCTGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563766.5
CDS TCA 90 bp CTGCAGGAACTCATAGGACTGCACACGGCGCTGGCGGGCCTGCTCTaGCTCCGGCCGGGAGAACCGCACCTGCGGTGGGAAGGGGAAGAG +
Preference number: 5 (lower is better)
Translates to: LQELIGLHTALAGLL*LRPGEPHLRWEGEE
Trigger: CTCTTCCCCTTCCCACCGCAGGTGCGGTTCTCCCGGCCGGAGTCAGAGCAGGCCCGCCAGCGCCGTGTGCAGTCCTATGAGTTCCTGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569757.1
CDS GCA 90 bp GGCCTGTGGCCACAGCGCACCCCACCCCCTAGACACTTTCTGAAGTaGCACAGCCAGGGACCAAGGCCGCAGGGCAGCCTACGCGGGTCT +
Preference number: 5 (lower is better)
Translates to: GLWPQRTPPPRHFLK*HSQGPRPQGSLRGS
Trigger: AGACCCGCGTAGGCTGCCCTGCGGCCTTGGTCCCTGGCTGTGGCACTTCAGAAAGTGTCTAGGGGGTGGGGTGCGCTGTGGCCACAGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563766.5
CDS-3UTR CAA 90 bp GCAGCGTGCGCAGCTGGGCCATCGACAGGACGTTGCTGGGGGCCACAGGCTTGTTGTTCTCCACCCCGCTaGAGCCGGGGCACAGCAGGT +
Preference number: 5 (lower is better)
Translates to: AACAAGPSTGRCWGPQACCSPPR*SRGTAG
Trigger: ACCTGCTGTGCCCCGGCTCAAGCGGGGTGGAGAACA...ACAAGCCTGTGGCCCCCAGCAACGTCCTGTCGATGGCCCAGCTGCGCACGCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000564750.5
ENST00000565551.5
CDS CCA 90 bp GTGAAGAGTCCCCTGCCTCGTTGGCCGCCTCCCTCTCCCGGTGCTTaGCGTCAGCCTTATCCAGGTAGGAGAAGCTGGGCCGCAGCTTGC +
Preference number: 5 (lower is better)
Translates to: VKSPLPRWPPPSPGA*RQPYPGRRSWAAAC
Trigger: GCAAGCTGCGGCCCAGCTTCTCCTACCTGGATAAGGCTGACGCCAAGCACCGGGAGAGGGAGGCGGCCAACGAGGCAGGGGACTCTTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565551.5
CDS-3UTR CAA 90 bp CTGGGTGACTTGACGAGCTCCGTGTTCTCCACCCCGCTTGAGCCGGGGCACAGCCAGGTGGAGCTCACCTaGCCTGTAGAGTGCAGCGGC +
Preference number: 5 (lower is better)
Translates to: LGDLTSSVFSTPLEPGHSQVELT*PVECSG
Trigger: GCCGCTGCACTCTACAGGCAAGGTGAGCTCCACCTG...GCTGTGCCCCGGCTCAAGCGGGGTGGAGAACACGGAGCTCGTCAAGTCACCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564750.5
CDS-3UTR CAA 90 bp TCGTCTTCCGCCTCATCCTGTGAAGAGTCCCCTGCCTCGTTGGCCGCCTCCCTCAAGCTGGGCCGCAGCTaGCCTGTAGAGTGCAGCGGC +
Preference number: 5 (lower is better)
Translates to: SSSASSCEESPASLAASLKLGRS*PVECSG
Trigger: GCCGCTGCACTCTACAGGCAAGCTGCGGCCCAGCTT...GAGGGAGGCGGCCAACGAGGCAGGGGACTCTTCACAGGATGAGGCGGAAGACGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565551.5
CDS TCA 90 bp ACTGGAAGTGCTGAGAGCACAGCGCTGAGCTGGTCAGCTTGCTTCTaGTGCACAGGGAGGCCGCCAGGACCCAGGCCCAAGCTGGGGCGT +
Preference number: 5 (lower is better)
Translates to: TGSAESTALSWSACF*CTGRPPGPRPKLGR
Trigger: ACGCCCCAGCTTGGGCCTGGGTCCTGGCGGCCTCCCTGTGCATCAGAAGCAAGCTGACCAGCTCAGCGCTGTGCTCTCAGCACTTCCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564061.5
CDS TCA 90 bp CCGCACCTGCGGTGGGAAGGGGAAGAGGTCATACCGTCAGGCCTGTaGCCCTTGCTGGACTGCCGTCTCAGCCCCTGCCAGAAGACCAGA +
Preference number: 5 (lower is better)
Translates to: PHLRWEGEEVIPSGL*PLLDCRLSPCQKTR
Trigger: TCTGGTCTTCTGGCAGGGGCTGAGACGGCAGTCCAGCAAGGGTCACAGGCCTGACGGTATGACCTCTTCCCCTTCCCACCGCAGGTGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569757.1
CDS GCA 90 bp AGGGAAACCGGACAGGCTTGGGGCCGGAAACTCACGAGGAATACGTaGTGGTCTCGTCGGCGCAGGCCCCGTCCACGTTCAGCGCAATCT +
Preference number: 5 (lower is better)
Translates to: RETGQAWGRKLTRNT*WSRRRRPRPRSAQS
Trigger: AGATTGCGCTGAACGTGGACGGGGCCTGCGCCGACGAGACCAGCACGTATTCCTCGTGAGTTTCCGGCCCCAAGCCTGTCCGGTTTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563766.5
CDS GCA 90 bp GTCCCCACCGCGGGACACCCAGCCCCGGGTACCTTGCCTGTAGAGTaGAGCGGCATAACGGGATGTGTTACTGGTGGTCTGGGAAGAGCA +
Preference number: 5 (lower is better)
Translates to: VPTAGHPAPGTLPVE*SGITGCVTGGLGRA
Trigger: TGCTCTTCCCAGACCACCAGTAACACATCCCGTTATGCCGCTGCACTCTACAGGCAAGGTACCCGGGGCTGGGTGTCCCGCGGTGGGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563766.5
CDS CCA 90 bp GAAACCGGACAGGCTTGGGGCCGGAAACTCACGAGGAATACGTGCTaGTCTCGTCGGCGCAGGCCCCGTCCACGTTCAGCGCAATCTGCT +
Preference number: 5 (lower is better)
Translates to: ETGQAWGRKLTRNTC*SRRRRPRPRSAQSA
Trigger: AGCAGATTGCGCTGAACGTGGACGGGGCCTGCGCCGACGAGACCAGCACGTATTCCTCGTGAGTTTCCGGCCCCAAGCCTGTCCGGTTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563766.5
CDS-3UTR CAA 90 bp GCGACTGTCCCTCAGGCCATAGTAATGCAGGTGGACCCAGGGCTCCTCTGCGTGCTGGGGGCCACAGGCTaGTCTTTCTCCTCCTCCTGG +
Preference number: 5 (lower is better)
Translates to: ATVPQAIVMQVDPGLLCVLGATG*SFSSSW
Trigger: CCAGGAGGAGGAGAAAGACAAGCCTGTGGCCCCCAG...CACGCAGAGGAGCCCTGGGTCCACCTGCATTACTATGGCCTGAGGGACAGTCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000564750.5
ENST00000565551.5
CDS-3UTR CAA 90 bp CGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAATGCCACAGGTCCTCACGGGCTCCTCCTaGATCCGCACACCGGGCGGG +
Preference number: 5 (lower is better)
Translates to: RLAEDNPFCPLHRAMPQVLTGSS*IRTPGG
Trigger: CCCGCCCGGTGTGCGGATCAAGGAGGAGCCCGTGAG...GACCTGTGGCATTGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp CCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCCCGAGAGGCAGCCCGTaGGCCAGCTTGCTGTGGAGG +
Preference number: 5 (lower is better)
Translates to: PLALCRLKQVEALLLVPPPRGSP*ASLLWR
Trigger: CCTCCACAGCAAGCTGGCCAACGGGCTGCCTCTCGG...GGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp GGACCCAGGGCTCCTCTGCGTGCTTCTTCTGCAGGAACTCATAGGACTGCACACCCGAGAGGCAGCCCGTaGGCCAGCTTGCTGTGGAGG +
Preference number: 5 (lower is better)
Translates to: GPRAPLRASSAGTHRTAHPRGSP*ASLLWR
Trigger: CCTCCACAGCAAGCTGGCCAACGGGCTGCCTCTCGG...GTGTGCAGTCCTATGAGTTCCTGCAGAAGAAGCACGCAGAGGAGCCCTGGGTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564750.5
CDS-3UTR CAA 90 bp GCAGCGTGCGCAGCTGGGCCATCGACAGGACGTTGCTGGGGGCCACAGGCTTGTAGATTGAAGAGGCGCTaGAGTTCGCTCAGCGTGAGC +
Preference number: 5 (lower is better)
Translates to: AACAAGPSTGRCWGPQACRLKRR*SSLSVS
Trigger: GCTCACGCTGAGCGAACTCAAGCGCCTCTTCAATCT...ACAAGCCTGTGGCCCCCAGCAACGTCCTGTCGATGGCCCAGCTGCGCACGCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564750.5
CDS GCA 90 bp CCAGGTCTGGGCAGAGCCTTGTGGAAAAGGAGCACGGGAAAGGCGTaGCTCAGGCAGCACCTGGCGCTCTCTATCCTCAGCGCAGGGAAA +
Preference number: 5 (lower is better)
Translates to: PGLGRALWKRSTGKA*LRQHLALSILSAGK
Trigger: TTTCCCTGCGCTGAGGATAGAGAGCGCCAGGTGCTGCCTGAGGCACGCCTTTCCCGTGCTCCTTTTCCACAAGGCTCTGCCCAGACCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564061.5
CDS CCA 90 bp CCTTGTGGAAAAGGAGCACGGGAAAGGCGTGCCTCAGGCAGCACCTaGCGCTCTCTATCCTCAGCGCAGGGAAACGGTCCCCAGCAAGCA +
Preference number: 5 (lower is better)
Translates to: PCGKGARERRASGST*RSLSSAQGNGPQQA
Trigger: TGCTTGCTGGGGACCGTTTCCCTGCGCTGAGGATAGAGAGCGCCAGGTGCTGCCTGAGGCACGCCTTTCCCGTGCTCCTTTTCCACAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564061.5
CDS-3UTR CAA 90 bp TCGGCGCAGGCCCCGTCCACGTTCAGCGCAATCTGCTCCCCTTTGCTGCGGCAATGCTTGGGCTTGATCTaGGCTGAGAGGTGCGGAATG +
Preference number: 5 (lower is better)
Translates to: SAQAPSTFSAICSPLLRQCLGLI*AERCGM
Trigger: CATTCCGCACCTCTCAGCCAAGATCAAGCCCAAGCA...TTGCCGCAGCAAAGGGGAGCAGATTGCGCTGAACGTGGACGGGGCCTGCGCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561494.5
CDS-3UTR CAA 90 bp CCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCTGTTCTCCACCCCGCTaGAGCCGGGGCACAGCAGGT +
Preference number: 5 (lower is better)
Translates to: PLALCRLKQVEALLLVPPCSPPR*SRGTAG
Trigger: ACCTGCTGTGCCCCGGCTCAAGCGGGGTGGAGAACA...GGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp GCTGGCCAAGTGCAGATTGAAGAGGCGCTTGAGTTCGCTCAGCGTGAGCACAAACTCACGGGCTCCTCCTaGATCCGCACACCGGGCGGG +
Preference number: 5 (lower is better)
Translates to: AGQVQIEEALEFAQREHKLTGSS*IRTPGG
Trigger: CCCGCCCGGTGTGCGGATCAAGGAGGAGCCCGTGAG...TTTGTGCTCACGCTGAGCGAACTCAAGCGCCTCTTCAATCTGCACTTGGCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564750.5
CDS-3UTR CAA 90 bp GTCGAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGCCGAGAGGCAGCCCGTaGGCCAGCTTGCTGTGGAGG +
Preference number: 5 (lower is better)
Translates to: VEALLLVPPFFLGLRFAGPRGSP*ASLLWR
Trigger: CCTCCACAGCAAGCTGGCCAACGGGCTGCCTCTCGG...CCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTCGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp CGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAATGCCACAGGTCTGGGGCGGGTGCCCGTaGAAGCTGTCTGTGCCCGCA +
Preference number: 5 (lower is better)
Translates to: RLAEDNPFCPLHRAMPQVWGGCP*KLSVPA
Trigger: TGCGGGCACAGACAGCTTCAACGGGCACCCGCCCCA...GACCTGTGGCATTGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp TCCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCTGGGGCGGGTGCCCGTaGAAGCTGTCTGTGCCCGCA +
Preference number: 5 (lower is better)
Translates to: SSCSVSSEASRGPTSGSAWGGCP*KLSVPA
Trigger: TGCGGGCACAGACAGCTTCAACGGGCACCCGCCCCA...GGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp CCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAATGCCACGGCACCAGTATCTGCTaGCAACCGGCGGCCAGCACC +
Preference number: 5 (lower is better)
Translates to: PCDWLRIIPSVHCTVQCHGTSIC*QPAAST
Trigger: GGTGCTGGCCGCCGGTTGCAAGCAGATACTGGTGCC...GTGGCATTGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS TCA 90 bp TACCACACTCAAGGCCTGGCACTGGAAGTGCTGAGAGCACAGCGCTaGGCTGGTCAGCTTGCTTCTGATGCACAGGGAGGCCGCCAGGAC +
Preference number: 5 (lower is better)
Translates to: YHTQGLALEVLRAQR*AGQLASDAQGGRQD
Trigger: GTCCTGGCGGCCTCCCTGTGCATCAGAAGCAAGCTGACCAGCTCAGCGCTGTGCTCTCAGCACTTCCAGTGCCAGGCCTTGAGTGTGGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564061.5
CDS CCA 90 bp GGTGGGAAGGGGAAGAGGTCATACCGTCAGGCCTGTGACCCTTGCTaGACTGCCGTCTCAGCCCCTGCCAGAAGACCAGAGAACTCCGTA +
Preference number: 5 (lower is better)
Translates to: GGKGKRSYRQACDPC*TAVSAPARRPENSV
Trigger: TACGGAGTTCTCTGGTCTTCTGGCAGGGGCTGAGACGGCAGTCCAGCAAGGGTCACAGGCCTGACGGTATGACCTCTTCCCCTTCCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569757.1
CDS-3UTR CAA 90 bp AAGCTGACCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCACAGGCGGCGGCCATGTaGCTGGTGGAGAAACTCCGG +
Preference number: 5 (lower is better)
Translates to: KLTLRLAEDNPFCPLHRAQAAAM*LVEKLR
Trigger: CCGGAGTTTCTCCACCAGCAACATGGCCGCCGCCTG...TGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGGTCAGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299853.10
ENST00000564209.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp TCCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCAGGCGGCGGCCATGTaGCTGGTGGAGAAACTCCGG +
Preference number: 5 (lower is better)
Translates to: SSCSVSSEASRGPTSGSAQAAAM*LVEKLR
Trigger: CCGGAGTTTCTCCACCAGCAACATGGCCGCCGCCTG...GGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299853.10
ENST00000564209.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp CCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCCAGGTGGAGCTCACCTaGCCTGTAGAGTGCAGCGGC +
Preference number: 5 (lower is better)
Translates to: PLALCRLKQVEALLLVPPQVELT*PVECSG
Trigger: GCCGCTGCACTCTACAGGCAAGGTGAGCTCCACCTG...GGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp CCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCTCCCTCTCCCGGTGCTaGGCGTCAGCCTTATCCAGG +
Preference number: 5 (lower is better)
Translates to: PLALCRLKQVEALLLVPPSLSRC*ASALSR
Trigger: CCTGGATAAGGCTGACGCCAAGCACCGGGAGAGGGA...GGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp CAGGTGGACCCAGGGCTCCTCTGCGTGCTTCTTCTGCAGGAACTCATAGGACTGTCCCTCTCCCGGTGCTaGGCGTCAGCCTTATCCAGG +
Preference number: 5 (lower is better)
Translates to: QVDPGLLCVLLLQELIGLSLSRC*ASALSR
Trigger: CCTGGATAAGGCTGACGCCAAGCACCGGGAGAGGGA...CAGTCCTATGAGTTCCTGCAGAAGAAGCACGCAGAGGAGCCCTGGGTCCACCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564750.5
ENST00000565551.5
CDS-3UTR CAA 90 bp GGACCCAGGGCTCCTCTGCGTGCTTCTTCTGCAGGAACTCATAGGACTGCACACTCCCTCTCCCGGTGCTaGGCGTCAGCCTTATCCAGG +
Preference number: 5 (lower is better)
Translates to: GPRAPLRASSAGTHRTAHSLSRC*ASALSR
Trigger: CCTGGATAAGGCTGACGCCAAGCACCGGGAGAGGGA...GTGTGCAGTCCTATGAGTTCCTGCAGAAGAAGCACGCAGAGGAGCCCTGGGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564750.5
ENST00000565551.5
CDS-3UTR CAA 90 bp TCCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCTGTTCTCCACCCCGCTaGAGCCGGGGCACAGCAGGT +
Preference number: 5 (lower is better)
Translates to: SSCSVSSEASRGPTSGSACSPPR*SRGTAG
Trigger: ACCTGCTGTGCCCCGGCTCAAGCGGGGTGGAGAACA...GGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp CGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAATGCCACAGGTCTGTTCTCCACCCCGCTaGAGCCGGGGCACAGCAGGT +
Preference number: 5 (lower is better)
Translates to: RLAEDNPFCPLHRAMPQVCSPPR*SRGTAG
Trigger: ACCTGCTGTGCCCCGGCTCAAGCGGGGTGGAGAACA...GACCTGTGGCATTGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp CGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGTCGTCTGCTCACGGGCTCCTCCTaGATCCGCACACCGGGCGGG +
Preference number: 5 (lower is better)
Translates to: RAMPQVMRWSVPLALCRLLTGSS*IRTPGG
Trigger: CCCGCCCGGTGTGCGGATCAAGGAGGAGCCCGTGAG...CAGACGACACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp GCTCCGTTCCCTCTAGATACACGTAACGCTGAGCCCAACAAGATCGCCTTCCTGCCGAGAGGCAGCCCGTaGGCCAGCTTGCTGTGGAGG +
Preference number: 5 (lower is better)
Translates to: APFPLDTRNAEPNKIAFLPRGSP*ASLLWR
Trigger: CCTCCACAGCAAGCTGGCCAACGGGCTGCCTCTCGG...CAGGAAGGCGATCTTGTTGGGCTCAGCGTTACGTGTATCTAGAGGGAACGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp CCACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGCCGAGAGGCAGCCCGTaGGCCAGCTTGCTGTGGAGG +
Preference number: 5 (lower is better)
Translates to: PLHRAMPQVMRWSVPLALPRGSP*ASLLWR
Trigger: CCTCCACAGCAAGCTGGCCAACGGGCTGCCTCTCGG...CAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp CTTAAGCTGACCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTTGGGGCGGGTGCCCGTaGAAGCTGTCTGTGCCCGCA +
Preference number: 5 (lower is better)
Translates to: LKLTLRLAEDNPFCPLHRWGGCP*KLSVPA
Trigger: TGCGGGCACAGACAGCTTCAACGGGCACCCGCCCCA...ACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGGTCAGCTTAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp CGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAATGCCACAGGTCGGCACCAGTATCTGCTaGCAACCGGCGGCCAGCACC +
Preference number: 5 (lower is better)
Translates to: RLAEDNPFCPLHRAMPQVGTSIC*QPAAST
Trigger: GGTGCTGGCCGCCGGTTGCAAGCAGATACTGGTGCC...GACCTGTGGCATTGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp CTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCTTCGGCACCAGTATCTGCTaGCAACCGGCGGCCAGCACC +
Preference number: 5 (lower is better)
Translates to: LALCRLKQVEALLLVPPFGTSIC*QPAAST
Trigger: GGTGCTGGCCGCCGGTTGCAAGCAGATACTGGTGCC...GAAGGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS TCA 90 bp ATCGAGGCTGGACGCACAGGGTACCACGGTCTCGCAGCTATGGTGTaGTGGAGTTGGATCTCAATCCGGTCTGACCCCAGAGCCCCAGCT +
Preference number: 5 (lower is better)
Translates to: IEAGRTGYHGLAAMV*WSWISIRSDPRAPA
Trigger: AGCTGGGGCTCTGGGGTCAGACCGGATTGAGATCCAACTCCATCACACCATAGCTGCGAGACCGTGGTACCCTGTGCGTCCAGCCTCGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561494.5
CDS CCA 90 bp AGGTCATCGAGGCTGGACGCACAGGGTACCACGGTCTCGCAGCTATaGTGTGATGGAGTTGGATCTCAATCCGGTCTGACCCCAGAGCCC +
Preference number: 5 (lower is better)
Translates to: RSSRLDAQGTTVSQL*CDGVGSQSGLTPEP
Trigger: GGGCTCTGGGGTCAGACCGGATTGAGATCCAACTCCATCACACCATAGCTGCGAGACCGTGGTACCCTGTGCGTCCAGCCTCGATGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561494.5
CDS-3UTR CAA 90 bp CGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTCAGGTGGAGCTCACCTaGCCTGTAGAGTGCAGCGGC +
Preference number: 5 (lower is better)
Translates to: RLKQVEALLLVPPFFLGLQVELT*PVECSG
Trigger: GCCGCTGCACTCTACAGGCAAGGTGAGCTCCACCTG...AAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp AAGCTGACCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCATCCCTCTCCCGGTGCTaGGCGTCAGCCTTATCCAGG +
Preference number: 5 (lower is better)
Translates to: KLTLRLAEDNPFCPLHRASLSRC*ASALSR
Trigger: CCTGGATAAGGCTGACGCCAAGCACCGGGAGAGGGA...TGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGGTCAGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp CCACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGTTCTCCACCCCGCTaGAGCCGGGGCACAGCAGGT +
Preference number: 5 (lower is better)
Translates to: PLHRAMPQVMRWSVPLALCSPPR*SRGTAG
Trigger: ACCTGCTGTGCCCCGGCTCAAGCGGGGTGGAGAACA...CAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp GTCCTTCACATCCTCGGCGCAGAGTTTGGTCACGGTTGCCACCTCTTTCCTAACTGTTCTCCACCCCGCTaGAGCCGGGGCACAGCAGGT +
Preference number: 5 (lower is better)
Translates to: VLHILGAEFGHGCHLFPNCSPPR*SRGTAG
Trigger: ACCTGCTGTGCCCCGGCTCAAGCGGGGTGGAGAACA...GTTAGGAAAGAGGTGGCAACCGTGACCAAACTCTGCGCCGAGGATGTGAAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564750.5
CDS-3UTR CAA 90 bp CTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCTTCCTGGGGGCCACAGGCTaGTCTTTCTCCTCCTCCTGG +
Preference number: 5 (lower is better)
Translates to: LALCRLKQVEALLLVPPFLGATG*SFSSSW
Trigger: CCAGGAGGAGGAGAAAGACAAGCCTGTGGCCCCCAG...GAAGGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp GTCGAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGCTGGGGGCCACAGGCTaGTCTTTCTCCTCCTCCTGG +
Preference number: 5 (lower is better)
Translates to: VEALLLVPPFFLGLRFAGLGATG*SFSSSW
Trigger: CCAGGAGGAGGAGAAAGACAAGCCTGTGGCCCCCAG...CCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTCGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp GCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGTTAGTACTCACGGGCTCCTCCTaGATCCGCACACCGGGCGGG +
Preference number: 5 (lower is better)
Translates to: ALLLVPPFFLGLRFAGLVLTGSS*IRTPGG
Trigger: CCCGCCCGGTGTGCGGATCAAGGAGGAGCCCGTGAG...TACTAACCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp ACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGCCGAGAGGCAGCCCGTaGGCCAGCTTGCTGTGGAGG +
Preference number: 5 (lower is better)
Translates to: TAPCNATGHEMVSSSCSVPRGSP*ASLLWR
Trigger: CCTCCACAGCAAGCTGGCCAACGGGCTGCCTCTCGG...CACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp CACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGTCGTCCGAGAGGCAGCCCGTaGGCCAGCTTGCTGTGGAGG +
Preference number: 5 (lower is better)
Translates to: HRAMPQVMRWSVPLALCRPRGSP*ASLLWR
Trigger: CCTCCACAGCAAGCTGGCCAACGGGCTGCCTCTCGG...ACGACACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp CACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGTCGTTGGGGCGGGTGCCCGTaGAAGCTGTCTGTGCCCGCA +
Preference number: 5 (lower is better)
Translates to: HRAMPQVMRWSVPLALCRWGGCP*KLSVPA
Trigger: TGCGGGCACAGACAGCTTCAACGGGCACCCGCCCCA...ACGACACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp GAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGTTATGGGGCGGGTGCCCGTaGAAGCTGTCTGTGCCCGCA +
Preference number: 5 (lower is better)
Translates to: EALLLVPPFFLGLRFAGLWGGCP*KLSVPA
Trigger: TGCGGGCACAGACAGCTTCAACGGGCACCCGCCCCA...TAACCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS CCA 90 bp TGGTGGTCTGGGAAGAGCAGAAGGTCTGCTTGTCCATCAGCTTCCTaGAGCACAGGGAGAAGCAACGTCACAGGGGAAGGCAGCTCCGAG +
Preference number: 5 (lower is better)
Translates to: WWSGKSRRSACPSAS*STGRSNVTGEGSSE
Trigger: CTCGGAGCTGCCTTCCCCTGTGACGTTGCTTCTCCCTGTGCTCCAGGAAGCTGATGGACAAGCAGACCTTCTGCTCTTCCCAGACCACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563766.5
CDS CCA 90 bp ATCTGTGTCCCGGGAGGACAAATGAACTTGGAGCCCCACCCCATCTaGTCAGGCAGTGTCCAGCCAGCAGTCCACAAAGGTGGCCACTTC +
Preference number: 5 (lower is better)
Translates to: ICVPGGQMNLEPHPI*SGSVQPAVHKGGHF
Trigger: GAAGTGGCCACCTTTGTGGACTGCTGGCTGGACACTGCCTGACCAGATGGGGTGGGGCTCCAAGTTCATTTGTCCTCCCGGGACACAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563766.5
CDS-3UTR CAA 90 bp ACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGCAGGCGGCGGCCATGTaGCTGGTGGAGAAACTCCGG +
Preference number: 5 (lower is better)
Translates to: TAPCNATGHEMVSSSCSVQAAAM*LVEKLR
Trigger: CCGGAGTTTCTCCACCAGCAACATGGCCGCCGCCTG...CACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299853.10
ENST00000564209.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp CCACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTCCCTCTCCCGGTGCTaGGCGTCAGCCTTATCCAGG +
Preference number: 5 (lower is better)
Translates to: PLHRAMPQVMRWSVPLALSLSRC*ASALSR
Trigger: CCTGGATAAGGCTGACGCCAAGCACCGGGAGAGGGA...CAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp CTTAAGCTGACCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTCTGGGGGCCACAGGCTaGTCTTTCTCCTCCTCCTGG +
Preference number: 5 (lower is better)
Translates to: LKLTLRLAEDNPFCPLHRLGATG*SFSSSW
Trigger: CCAGGAGGAGGAGAAAGACAAGCCTGTGGCCCCCAG...ACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGGTCAGCTTAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp CAGGTACTGACGCTCATGCTCAGAGCGACTGTCCCTCAGGCCATAGTAATGCAGCTGGGGGCCACAGGCTaGTCTTTCTCCTCCTCCTGG +
Preference number: 5 (lower is better)
Translates to: QVLTLMLRATVPQAIVMQLGATG*SFSSSW
Trigger: CCAGGAGGAGGAGAAAGACAAGCCTGTGGCCCCCAG...CTGCATTACTATGGCCTGAGGGACAGTCGCTCTGAGCATGAGCGTCAGTACCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000564750.5
ENST00000565551.5
CDS-3UTR CAA 90 bp GGCCGGGAGAACCGCACCGTGATCTGCTTAACATCGTCTTCCGCCTCATCCTGTCACCACCCAGTTCCCTaGGACCAACATCGCCACCTT +
Preference number: 5 (lower is better)
Translates to: GRENRTVICLTSSSASSCHHPVP*DQHRHL
Trigger: AAGGTGGCGATGTTGGTCCAAGGGAACTGGGTGGTG...ACAGGATGAGGCGGAAGACGATGTTAAGCAGATCACGGTGCGGTTCTCCCGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564750.5
CDS-3UTR CAA 90 bp CCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCCACCACCCAGTTCCCTaGGACCAACATCGCCACCTT +
Preference number: 5 (lower is better)
Translates to: PLALCRLKQVEALLLVPPHHPVP*DQHRHL
Trigger: AAGGTGGCGATGTTGGTCCAAGGGAACTGGGTGGTG...GGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp TCCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCTCCTCGGCGCAGAGTTaGGTCACGGTTGCCACCTCT +
Preference number: 5 (lower is better)
Translates to: SSCSVSSEASRGPTSGSASSAQS*VTVATS
Trigger: AGAGGTGGCAACCGTGACCAAACTCTGCGCCGAGGA...GGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp AAGCTGACCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCATCCTCGGCGCAGAGTTaGGTCACGGTTGCCACCTCT +
Preference number: 5 (lower is better)
Translates to: KLTLRLAEDNPFCPLHRASSAQS*VTVATS
Trigger: AGAGGTGGCAACCGTGACCAAACTCTGCGCCGAGGA...TGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGGTCAGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp GTGAACTTCCACATAACGAAGTCTCGGCCCCTGCAGAGCACCTCAGCAGGCACGTGCTGGGCCTTGGTTTaGGCTACTTGGATCCGCTGG +
Preference number: 5 (lower is better)
Translates to: VNFHITKSRPLQSTSAGTCWALV*ATWIRW
Trigger: CCAGCGGATCCAAGTAGCCAAAACCAAGGCCCAGCA...CGTGCCTGCTGAGGTGCTCTGCAGGGGCCGAGACTTCGTTATGTGGAAGTTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564750.5
CDS-3UTR CAA 90 bp GCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGTTAGTATGGGGCGGGTGCCCGTaGAAGCTGTCTGTGCCCGCA +
Preference number: 5 (lower is better)
Translates to: ALLLVPPFFLGLRFAGLVWGGCP*KLSVPA
Trigger: TGCGGGCACAGACAGCTTCAACGGGCACCCGCCCCA...TACTAACCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp CCATTAGCTCCGTTCCCTCTAGATACACGTAACGCTGAGCCCAACAAGATCGCCGGCACCAGTATCTGCTaGCAACCGGCGGCCAGCACC +
Preference number: 5 (lower is better)
Translates to: PLAPFPLDTRNAEPNKIAGTSIC*QPAAST
Trigger: GGTGCTGGCCGCCGGTTGCAAGCAGATACTGGTGCC...GGCGATCTTGTTGGGCTCAGCGTTACGTGTATCTAGAGGGAACGGAGCTAATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp CCGCTGGACCACATCCGGGTGCTTCTTGATGAACTCCCCATCATAAGGCAGAATGGCACCAGTATCTGCTaGCAACCGGCGGCCAGCACC +
Preference number: 5 (lower is better)
Translates to: PLDHIRVLLDELPIIRQNGTSIC*QPAAST
Trigger: GGTGCTGGCCGCCGGTTGCAAGCAGATACTGGTGCC...ATTCTGCCTTATGATGGGGAGTTCATCAAGAAGCACCCGGATGTGGTCCAGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564750.5
CDS TCA 90 bp CAGGAGGCTTGCAATACCACACTCAAGGCCTGGCACTGGAAGTGCTaGGAGCACAGCGCTGAGCTGGTCAGCTTGCTTCTGATGCACAGG +
Preference number: 5 (lower is better)
Translates to: QEACNTTLKAWHWKC*EHSAELVSLLLMHR
Trigger: CCTGTGCATCAGAAGCAAGCTGACCAGCTCAGCGCTGTGCTCTCAGCACTTCCAGTGCCAGGCCTTGAGTGTGGTATTGCAAGCCTCCTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564061.5
CDS CCA 90 bp TCCACAAGGCCTCCTGTCCTAGTTTCTATTCCTCATACACAGGGATaGGCCTTGGCCTCAGATCATCACCCAAGGCTGCAGGCCCGCTCC +
Preference number: 5 (lower is better)
Translates to: STRPPVLVSIPHTQG*ALASDHHPRLQARS
Trigger: GGAGCGGGCCTGCAGCCTTGGGTGATGATCTGAGGCCAAGGCCCATCCCTGTGTATGAGGAATAGAAACTAGGACAGGAGGCCTTGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564061.5
CDS-3UTR CAA 90 bp GCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGTTAGTACAGGCGGCGGCCATGTaGCTGGTGGAGAAACTCCGG +
Preference number: 5 (lower is better)
Translates to: ALLLVPPFFLGLRFAGLVQAAAM*LVEKLR
Trigger: CCGGAGTTTCTCCACCAGCAACATGGCCGCCGCCTG...TACTAACCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299853.10
ENST00000564209.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp CCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCTGCTTGGGCTTGATCTaGGCTGAGAGGTGCGGAATG +
Preference number: 5 (lower is better)
Translates to: PLALCRLKQVEALLLVPPCLGLI*AERCGM
Trigger: CATTCCGCACCTCTCAGCCAAGATCAAGCCCAAGCA...GGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp GTGAACTTCCACATAACGAAGTCTCGGCCCCTGCAGAGCACCTCAGCAGGCACGTTCTGCTGCTTGGGCTaGATCTTGGCTGAGAGGTGC +
Preference number: 5 (lower is better)
Translates to: VNFHITKSRPLQSTSAGTFCCLG*ILAERC
Trigger: GCACCTCTCAGCCAAGATCAAGCCCAAGCAGCAGAA...CGTGCCTGCTGAGGTGCTCTGCAGGGGCCGAGACTTCGTTATGTGGAAGTTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564750.5
CDS-3UTR CAA 90 bp AGGTACTCACTGGGTGACTTGACGAGCTCCGTGTTCTCCACCCCGCTTGAGCCGGAGCAGAAGGTCTGCTaGTCCATCAGCTTCGAGGAA +
Preference number: 5 (lower is better)
Translates to: RYSLGDLTSSVFSTPLEPEQKVC*SISFEE
Trigger: TTCCTCGAAGCTGATGGACAAGCAGACCTTCTGCTC...CGGCTCAAGCGGGGTGGAGAACACGGAGCTCGTCAAGTCACCCAGTGAGTACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564750.5
ENST00000565551.5
CDS-3UTR CAA 90 bp TGTCCACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCAGGTGGAGCTCACCTaGCCTGTAGAGTGCAGCGGC +
Preference number: 5 (lower is better)
Translates to: CPLHRAMPQVMRWSVPLAQVELT*PVECSG
Trigger: GCCGCTGCACTCTACAGGCAAGGTGAGCTCCACCTG...AGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGTGGACA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp GAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGTTACAGGTGGAGCTCACCTaGCCTGTAGAGTGCAGCGGC +
Preference number: 5 (lower is better)
Translates to: EALLLVPPFFLGLRFAGLQVELT*PVECSG
Trigger: GCCGCTGCACTCTACAGGCAAGGTGAGCTCCACCTG...TAACCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp CGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGTCGTCTGTCCCTCTCCCGGTGCTaGGCGTCAGCCTTATCCAGG +
Preference number: 5 (lower is better)
Translates to: RAMPQVMRWSVPLALCRLSLSRC*ASALSR
Trigger: CCTGGATAAGGCTGACGCCAAGCACCGGGAGAGGGA...CAGACGACACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp TGTCCACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTTCCCTCTCCCGGTGCTaGGCGTCAGCCTTATCCAGG +
Preference number: 5 (lower is better)
Translates to: CPLHRAMPQVMRWSVPLASLSRC*ASALSR
Trigger: CCTGGATAAGGCTGACGCCAAGCACCGGGAGAGGGA...AGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGTGGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp TGTCCACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGGGGGCCACAGGCTaGTCTTTCTCCTCCTCCTGG +
Preference number: 5 (lower is better)
Translates to: CPLHRAMPQVMRWSVPLALGATG*SFSSSW
Trigger: CCAGGAGGAGGAGAAAGACAAGCCTGTGGCCCCCAG...AGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGTGGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp CTCTGCGTGCTTCTTCTGCAGGAACTCATAGGACTGCACACGGCGCTGGCGGGCAGGAGGCTCATCAAGTaGGCAAAAGGCATGACCTTC +
Preference number: 5 (lower is better)
Translates to: LCVLLLQELIGLHTALAGRRLIK*AKGMTF
Trigger: GAAGGTCATGCCTTTTGCCAACTTGATGAGCCTCCT...GCCCGCCAGCGCCGTGTGCAGTCCTATGAGTTCCTGCAGAAGAAGCACGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564750.5
CDS-3UTR CAA 90 bp TCCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCACCACCCAGTTCCCTaGGACCAACATCGCCACCTT +
Preference number: 5 (lower is better)
Translates to: SSCSVSSEASRGPTSGSAHHPVP*DQHRHL
Trigger: AAGGTGGCGATGTTGGTCCAAGGGAACTGGGTGGTG...GGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp CGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTCACCACCCAGTTCCCTaGGACCAACATCGCCACCTT +
Preference number: 5 (lower is better)
Translates to: RLKQVEALLLVPPFFLGLHHPVP*DQHRHL
Trigger: AAGGTGGCGATGTTGGTCCAAGGGAACTGGGTGGTG...AAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp CGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTGGGCTGGACGAGTCCTaGGGGTATAGGATGTCACTC +
Preference number: 5 (lower is better)
Translates to: RLKQVEALLLVPPFFLGLGLDES*GYRMSL
Trigger: GAGTGACATCCTATACCCCAAGGACTCGTCCAGCCC...AAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp CTTAAGCTGACCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTTCCTCGGCGCAGAGTTaGGTCACGGTTGCCACCTCT +
Preference number: 5 (lower is better)
Translates to: LKLTLRLAEDNPFCPLHRSSAQS*VTVATS
Trigger: AGAGGTGGCAACCGTGACCAAACTCTGCGCCGAGGA...ACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGGTCAGCTTAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp CCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAATGCCACAACTCCCAGCCTTTGTaGATCCTCACCACGGCCATG +
Preference number: 5 (lower is better)
Translates to: PCDWLRIIPSVHCTVQCHNSQPL*ILTTAM
Trigger: CATGGCCGTGGTGAGGATCAACAAAGGCTGGGAGTT...GTGGCATTGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp GTGCGCAGCTGGGCCATCGACAGGACGTTGCTGGGGGCCACAGGCTTGTCTTTCGTGCATCCGGCTTCTTaGGCATGGTTTCCTTTACAA +
Preference number: 5 (lower is better)
Translates to: VRSWAIDRTLLGATGLSFVHPAS*AWFPLQ
Trigger: TTGTAAAGGAAACCATGCCAAAGAAGCCGGATGCAC...GAAAGACAAGCCTGTGGCCCCCAGCAACGTCCTGTCGATGGCCCAGCTGCGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564750.5
CDS-3UTR CAA 90 bp GTAACGCTGAGCCCAACAAGATCGCCTTCCTGTAACCATTTGAAGATAGCACCACTCACGGGCTCCTCCTaGATCCGCACACCGGGCGGG +
Preference number: 5 (lower is better)
Translates to: VTLSPTRSPSCNHLKIAPLTGSS*IRTPGG
Trigger: CCCGCCCGGTGTGCGGATCAAGGAGGAGCCCGTGAG...TGGTGCTATCTTCAAATGGTTACAGGAAGGCGATCTTGTTGGGCTCAGCGTTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp CCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCAGATTGAAGAGGCGCTaGAGTTCGCTCAGCGTGAGC +
Preference number: 5 (lower is better)
Translates to: PLALCRLKQVEALLLVPPRLKRR*SSLSVS
Trigger: GCTCACGCTGAGCGAACTCAAGCGCCTCTTCAATCT...GGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp TTCACCACCCAGTTCCCTTGGACCAACATCGCCACCTTCTGGATGCCCCGCAGACTGGCCAAGTGCAGATaGAAGAGGCGCTTGAGTTCG +
Preference number: 5 (lower is better)
Translates to: FTTQFPWTNIATFWMPRRLAKCR*KRRLSS
Trigger: CGAACTCAAGCGCCTCTTCAATCTGCACTTGGCCAG...TCTGCGGGGCATCCAGAAGGTGGCGATGTTGGTCCAAGGGAACTGGGTGGTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564750.5
CDS TCA 90 bp CAGTGTCCAGCCAGCAGTCCACAAAGGTGGCCACTTCCAGTCCCCTaGCAATGTGTCATTTCTGTTATTTCCACACCTGCCCGGCCCCCA +
Preference number: 5 (lower is better)
Translates to: QCPASSPQRWPLPVP*QCVISVISTPARPP
Trigger: TGGGGGCCGGGCAGGTGTGGAAATAACAGAAATGACACATTGTCAGGGGACTGGAAGTGGCCACCTTTGTGGACTGCTGGCTGGACACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563766.5
CDS TCA 90 bp GCAGGAACATGGGTTCCAATCCCAGCTTCTGCTACTCACCATCTCTaGGGGCCTTGGGCAGCCACAAACCTGTGCCTCTCACCTCACCAT +
Preference number: 5 (lower is better)
Translates to: AGTWVPIPASATHHL*GPWAATNLCLSPHH
Trigger: ATGGTGAGGTGAGAGGCACAGGTTTGTGGCTGCCCAAGGCCCTCAGAGATGGTGAGTAGCAGAAGCTGGGATTGGAACCCATGTTCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563282.1
ENST00000564061.5
CDS CCA 90 bp CCGCAGCTTGCCTGTAGAGTGCAGCGGCATAACGGGATGTGTTACTaGTGGTCTGGGAAGAGCAGAAGGTCTGCTTGTCCATCAGCTTCG +
Preference number: 5 (lower is better)
Translates to: PQLACRVQRHNGMCY*WSGKSRRSACPSAS
Trigger: CGAAGCTGATGGACAAGCAGACCTTCTGCTCTTCCCAGACCACCAGTAACACATCCCGTTATGCCGCTGCACTCTACAGGCAAGCTGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565551.5
CDS CCA 90 bp CTCACATCTGGCCCCATTCTCTCATTCATCAGCCTCATGCGTCCCTaGCCTCTCTGGAGCTGCCCATCCCTGTCTTTCTGGACACTTTCC +
Preference number: 5 (lower is better)
Translates to: LTSGPILSFISLMRP*PLWSCPSLSFWTLS
Trigger: GGAAAGTGTCCAGAAAGACAGGGATGGGCAGCTCCAGAGAGGCCAGGGACGCATGAGGCTGATGAATGAGAGAATGGGGCCAGATGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567022.5
CDS-3UTR CAA 90 bp CTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCTTCTTCTGCTGCTTGGGCTaGATCTTGGCTGAGAGGTGC +
Preference number: 5 (lower is better)
Translates to: LALCRLKQVEALLLVPPFFCCLG*ILAERC
Trigger: GCACCTCTCAGCCAAGATCAAGCCCAAGCAGCAGAA...GAAGGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp CAATCTGCTCCCCTTTGCTGCGGCAATAGTTGGGGTTCAGGGTGTCGATGGCCATTCTGCTGCTTGGGCTaGATCTTGGCTGAGAGGTGC +
Preference number: 5 (lower is better)
Translates to: QSAPLCCGNSWGSGCRWPFCCLG*ILAERC
Trigger: GCACCTCTCAGCCAAGATCAAGCCCAAGCAGCAGAA...TGGCCATCGACACCCTGAACCCCAACTATTGCCGCAGCAAAGGGGAGCAGATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561494.5
CDS-3UTR CAA 90 bp CGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAATGCCACAGGTCTTCTGCTGCTTGGGCTaGATCTTGGCTGAGAGGTGC +
Preference number: 5 (lower is better)
Translates to: RLAEDNPFCPLHRAMPQVFCCLG*ILAERC
Trigger: GCACCTCTCAGCCAAGATCAAGCCCAAGCAGCAGAA...GACCTGTGGCATTGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp GTCGAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGTTCTGCTGCTTGGGCTaGATCTTGGCTGAGAGGTGC +
Preference number: 5 (lower is better)
Translates to: VEALLLVPPFFLGLRFAGFCCLG*ILAERC
Trigger: GCACCTCTCAGCCAAGATCAAGCCCAAGCAGCAGAA...CCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTCGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp GCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGTTAGTATCCCTCTCCCGGTGCTaGGCGTCAGCCTTATCCAGG +
Preference number: 5 (lower is better)
Translates to: ALLLVPPFFLGLRFAGLVSLSRC*ASALSR
Trigger: CCTGGATAAGGCTGACGCCAAGCACCGGGAGAGGGA...TACTAACCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp CGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAATGCCACAGGTCTACTCACTGGGTGACTaGACGAGCTCCGTGTTCTCC +
Preference number: 5 (lower is better)
Translates to: RLAEDNPFCPLHRAMPQVYSLGD*TSSVFS
Trigger: GGAGAACACGGAGCTCGTCAAGTCACCCAGTGAGTA...GACCTGTGGCATTGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp CGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTTACTCACTGGGTGACTaGACGAGCTCCGTGTTCTCC +
Preference number: 5 (lower is better)
Translates to: RLKQVEALLLVPPFFLGLYSLGD*TSSVFS
Trigger: GGAGAACACGGAGCTCGTCAAGTCACCCAGTGAGTA...AAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp ACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGTCCTCGGCGCAGAGTTaGGTCACGGTTGCCACCTCT +
Preference number: 5 (lower is better)
Translates to: TAPCNATGHEMVSSSCSVSSAQS*VTVATS
Trigger: AGAGGTGGCAACCGTGACCAAACTCTGCGCCGAGGA...CACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp TGTCCACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTTCCTCGGCGCAGAGTTaGGTCACGGTTGCCACCTCT +
Preference number: 5 (lower is better)
Translates to: CPLHRAMPQVMRWSVPLASSAQS*VTVATS
Trigger: AGAGGTGGCAACCGTGACCAAACTCTGCGCCGAGGA...AGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGTGGACA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp CTGGGTGGCATCAGCATCATCAGGTACTCACTGGGTGACTTGACGAGCTCCGTGAACTCCCAGCCTTTGTaGATCCTCACCACGGCCATG +
Preference number: 5 (lower is better)
Translates to: LGGISIIRYSLGDLTSSVNSQPL*ILTTAM
Trigger: CATGGCCGTGGTGAGGATCAACAAAGGCTGGGAGTT...CACGGAGCTCGTCAAGTCACCCAGTGAGTACCTGATGATGCTGATGCCACCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564750.5
CDS-3UTR CAA 90 bp CTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCTTCAACTCCCAGCCTTTGTaGATCCTCACCACGGCCATG +
Preference number: 5 (lower is better)
Translates to: LALCRLKQVEALLLVPPFNSQPL*ILTTAM
Trigger: CATGGCCGTGGTGAGGATCAACAAAGGCTGGGAGTT...GAAGGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp GTCGAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGAACTCCCAGCCTTTGTaGATCCTCACCACGGCCATG +
Preference number: 5 (lower is better)
Translates to: VEALLLVPPFFLGLRFAGNSQPL*ILTTAM
Trigger: CATGGCCGTGGTGAGGATCAACAAAGGCTGGGAGTT...CCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTCGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp CGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTATGAACTCCCAGCCTTaGTTGATCCTCACCACGGCC +
Preference number: 5 (lower is better)
Translates to: RLKQVEALLLVPPFFLGLMNSQP*LILTTA
Trigger: GGCCGTGGTGAGGATCAACAAAGGCTGGGAGTTCAT...AAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp CTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCTTCATGAACTCCCAGCCTTaGTTGATCCTCACCACGGCC +
Preference number: 5 (lower is better)
Translates to: LALCRLKQVEALLLVPPFMNSQP*LILTTA
Trigger: GGCCGTGGTGAGGATCAACAAAGGCTGGGAGTTCAT...GAAGGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp TCCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCATGAACTCCCAGCCTTaGTTGATCCTCACCACGGCC +
Preference number: 5 (lower is better)
Translates to: SSCSVSSEASRGPTSGSAMNSQP*LILTTA
Trigger: GGCCGTGGTGAGGATCAACAAAGGCTGGGAGTTCAT...GGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp CTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCTTCCTTGGTTTTGGCTACTaGGATCCGCTGGTCCCCACA +
Preference number: 5 (lower is better)
Translates to: LALCRLKQVEALLLVPPFLGFGY*DPLVPT
Trigger: TGTGGGGACCAGCGGATCCAAGTAGCCAAAACCAAG...GAAGGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp CTTAAGCTGACCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTTGCTGGGCCTTGGTTTaGGCTACTTGGATCCGCTGG +
Preference number: 5 (lower is better)
Translates to: LKLTLRLAEDNPFCPLHRCWALV*ATWIRW
Trigger: CCAGCGGATCCAAGTAGCCAAAACCAAGGCCCAGCA...ACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGGTCAGCTTAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp CCACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGCTGGGCCTTGGTTTaGGCTACTTGGATCCGCTGG +
Preference number: 5 (lower is better)
Translates to: PLHRAMPQVMRWSVPLALCWALV*ATWIRW
Trigger: CCAGCGGATCCAAGTAGCCAAAACCAAGGCCCAGCA...CAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp CCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAATGCCACTGGTTCTGCTGGGCCTaGGTTTTGGCTACTTGGATC +
Preference number: 5 (lower is better)
Translates to: PCDWLRIIPSVHCTVQCHWFCWA*VLATWI
Trigger: GATCCAAGTAGCCAAAACCAAGGCCCAGCAGAACCA...GTGGCATTGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp CAAATTGTACTGCAAAGAAGGTCCCAGCTGGTCTCTTCTGGGAGTGATCTAACTCTCACGGGCTCCTCCTaGATCCGCACACCGGGCGGG +
Preference number: 5 (lower is better)
Translates to: QIVLQRRSQLVSSGSDLTLTGSS*IRTPGG
Trigger: CCCGCCCGGTGTGCGGATCAAGGAGGAGCCCGTGAG...AGTTAGATCACTCCCAGAAGAGACCAGCTGGGACCTTCTTTGCAGTACAATTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp CGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAATGCCACAGGTCAGATTGAAGAGGCGCTaGAGTTCGCTCAGCGTGAGC +
Preference number: 5 (lower is better)
Translates to: RLAEDNPFCPLHRAMPQVRLKRR*SSLSVS
Trigger: GCTCACGCTGAGCGAACTCAAGCGCCTCTTCAATCT...GACCTGTGGCATTGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp CTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCTTCCTGGCCAAGTGCAGATaGAAGAGGCGCTTGAGTTCG +
Preference number: 5 (lower is better)
Translates to: LALCRLKQVEALLLVPPFLAKCR*KRRLSS
Trigger: CGAACTCAAGCGCCTCTTCAATCTGCACTTGGCCAG...GAAGGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp GTCGAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGCTGGCCAAGTGCAGATaGAAGAGGCGCTTGAGTTCG +
Preference number: 5 (lower is better)
Translates to: VEALLLVPPFFLGLRFAGLAKCR*KRRLSS
Trigger: CGAACTCAAGCGCCTCTTCAATCTGCACTTGGCCAG...CCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTCGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp CCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCTTCCGCCCTTCTTCCTaGGGCTTAGATTTGCTGGGT +
Preference number: 5 (lower is better)
Translates to: PLALCRLKQVEALLLVPPFRPSS*GLDLLG
Trigger: ACCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAA...GGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS TCA 90 bp CAGTGTAGGAGCCGGGGCCTCCCAGCCCAAAGCCCCTCACACACCTaGTTGTGCATCCGGCTTCTTTGGCATGGTTTCCTTTACAAGATT +
Preference number: 5 (lower is better)
Translates to: QCRSRGLPAQSPSHT*LCIRLLWHGFLYKI
Trigger: AATCTTGTAAAGGAAACCATGCCAAAGAAGCCGGATGCACAATCAGGTGTGTGAGGGGCTTTGGGCTGGGAGGCCCCGGCTCCTACACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569787.1
CDS GCA 90 bp ACTGGGACCATCAGTCGTTCAACCAACATTTCCTTGTGCCTATTCTaGAACAGGCCCTGCACTGGGAGGGGGAGCCCACAACCAACCAAC +
Preference number: 5 (lower is better)
Translates to: TGTISRSTNISLCLF*NRPCTGRGSPQPTN
Trigger: GTTGGTTGGTTGTGGGCTCCCCCTCCCAGTGCAGGGCCTGTTGCAGAATAGGCACAAGGAAATGTTGGTTGAACGACTGATGGTCCCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000563766.5
ENST00000567022.5
CDS GCA 90 bp GATCCATTTGCTTGCCTCATCCCTCCCTGTCTGCCCCAGCCCAGATaGAGGAACATGGGTTCCAATCCCAGCTTCTGCTACTCACCATCT +
Preference number: 5 (lower is better)
Translates to: DPFACLIPPCLPQPR*RNMGSNPSFCYSPS
Trigger: AGATGGTGAGTAGCAGAAGCTGGGATTGGAACCCATGTTCCTGCATCTGGGCTGGGGCAGACAGGGAGGGATGAGGCAAGCAAATGGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563282.1
ENST00000564061.5
CDS GCA 90 bp AACCTAAGCTCACATCTGGCCCCATTCTCTCATTCATCAGCCTCATaGGTCCCTGGCCTCTCTGGAGCTGCCCATCCCTGTCTTTCTGGA +
Preference number: 5 (lower is better)
Translates to: NLSSHLAPFSHSSAS*VPGLSGAAHPCLSG
Trigger: TCCAGAAAGACAGGGATGGGCAGCTCCAGAGAGGCCAGGGACGCATGAGGCTGATGAATGAGAGAATGGGGCCAGATGTGAGCTTAGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567022.5
CDS CCA 90 bp CACCTTGCCTGTAGAGTGCAGCGGCATAACGGGATGTGTTACTGGTaGTCTGGGAAGAGCAGAAGGTCTGCTTGTCCATCAGCTTCGAGG +
Preference number: 5 (lower is better)
Translates to: HLACRVQRHNGMCYW*SGKSRRSACPSASR
Trigger: CCTCGAAGCTGATGGACAAGCAGACCTTCTGCTCTTCCCAGACCACCAGTAACACATCCCGTTATGCCGCTGCACTCTACAGGCAAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000563024.5
ENST00000564061.5
ENST00000564209.5
ENST00000564750.5
ENST00000565358.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS CCA 90 bp GGGTACCTTGCCTGTAGAGTGCAGCGGCATAACGGGATGTGTTACTaGTGGTCTGGGAAGAGCAGAAGGTCTGCTTGTCCATCAGCTTCC +
Preference number: 5 (lower is better)
Translates to: GYLACRVQRHNGMCY*WSGKSRRSACPSAS
Trigger: GGAAGCTGATGGACAAGCAGACCTTCTGCTCTTCCCAGACCACCAGTAACACATCCCGTTATGCCGCTGCACTCTACAGGCAAGGTACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563766.5
CDS CCA 90 bp GATGCTGCCTGTAGAGTGCAGCGGCATAACGGGATGTGTTACTGGTaGTCTGGGAAGAGCAGAAGGTCTGCTTGTCCATCAGCTTCGAGG +
Preference number: 5 (lower is better)
Translates to: DAACRVQRHNGMCYW*SGKSRRSACPSASR
Trigger: CCTCGAAGCTGATGGACAAGCAGACCTTCTGCTCTTCCCAGACCACCAGTAACACATCCCGTTATGCCGCTGCACTCTACAGGCAGCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564256.1
CDS-3UTR CAA 90 bp CCACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGCTTGGGCTTGATCTaGGCTGAGAGGTGCGGAATG +
Preference number: 5 (lower is better)
Translates to: PLHRAMPQVMRWSVPLALCLGLI*AERCGM
Trigger: CATTCCGCACCTCTCAGCCAAGATCAAGCCCAAGCA...CAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp GTCGAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGTCTACCTTCTGCTGCTaGGGCTTGATCTTGGCTGAG +
Preference number: 5 (lower is better)
Translates to: VEALLLVPPFFLGLRFAGSTFCC*GLILAE
Trigger: CTCAGCCAAGATCAAGCCCAAGCAGCAGAAGGTAGA...CCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTCGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000564209.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp CAGCGCAATCTGCTCCCCTTTGCTGCGGCAATAGTTGGGGTTCAGGGTGTCGATGAGCAGAAGGTCTGCTaGTCCATCAGCTTCGAGGAA +
Preference number: 5 (lower is better)
Translates to: QRNLLPFAAAIVGVQGVDEQKVC*SISFEE
Trigger: TTCCTCGAAGCTGATGGACAAGCAGACCTTCTGCTC...ATCGACACCCTGAACCCCAACTATTGCCGCAGCAAAGGGGAGCAGATTGCGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561494.5
CDS-3UTR CAA 90 bp CCAGGAAGTCCTTCACATCCTCGGCGCAGAGTTTGGTCACGGTTGCCACCTCTTGAGCAGAAGGTCTGCTaGTCCATCAGCTTCGAGGAA +
Preference number: 5 (lower is better)
Translates to: PGSPSHPRRRVWSRLPPLEQKVC*SISFEE
Trigger: TTCCTCGAAGCTGATGGACAAGCAGACCTTCTGCTC...AAGAGGTGGCAACCGTGACCAAACTCTGCGCCGAGGATGTGAAGGACTTCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564750.5
CDS-3UTR CAA 90 bp CGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTGAGCAGAAGGTCTGCTaGTCCATCAGCTTCGAGGAA +
Preference number: 5 (lower is better)
Translates to: RLKQVEALLLVPPFFLGLEQKVC*SISFEE
Trigger: TTCCTCGAAGCTGATGGACAAGCAGACCTTCTGCTC...AAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp GTAACGCTGAGCCCAACAAGATCGCCTTCCTGTAACCATTTGAAGATAGCACCATGTTCTCCACCCCGCTaGAGCCGGGGCACAGCAGGT +
Preference number: 5 (lower is better)
Translates to: VTLSPTRSPSCNHLKIAPCSPPR*SRGTAG
Trigger: ACCTGCTGTGCCCCGGCTCAAGCGGGGTGGAGAACA...TGGTGCTATCTTCAAATGGTTACAGGAAGGCGATCTTGTTGGGCTCAGCGTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp GCTCCGTTCCCTCTAGATACACGTAACGCTGAGCCCAACAAGATCGCCTTCCTGTACTCACTGGGTGACTaGACGAGCTCCGTGTTCTCC +
Preference number: 5 (lower is better)
Translates to: APFPLDTRNAEPNKIAFLYSLGD*TSSVFS
Trigger: GGAGAACACGGAGCTCGTCAAGTCACCCAGTGAGTA...CAGGAAGGCGATCTTGTTGGGCTCAGCGTTACGTGTATCTAGAGGGAACGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp GTTCCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGTACTCACTGGGTGACTaGACGAGCTCCGTGTTCTCC +
Preference number: 5 (lower is better)
Translates to: VPLALCRLKQVEALLLVPYSLGD*TSSVFS
Trigger: GGAGAACACGGAGCTCGTCAAGTCACCCAGTGAGTA...CGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp GGTACTGACGCTCATGCTCAGAGCGACTGTCCCTCAGGCCATAGTAATGCAGGTTACTCACTGGGTGACTaGACGAGCTCCGTGTTCTCC +
Preference number: 5 (lower is better)
Translates to: GTDAHAQSDCPSGHSNAGYSLGD*TSSVFS
Trigger: GGAGAACACGGAGCTCGTCAAGTCACCCAGTGAGTA...ACCTGCATTACTATGGCCTGAGGGACAGTCGCTCTGAGCATGAGCGTCAGTACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564750.5
ENST00000565551.5
CDS-3UTR CAA 90 bp CCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAATGCCACAGGAGGCTCATCAAGTaGGCAAAAGGCATGACCTTC +
Preference number: 5 (lower is better)
Translates to: PCDWLRIIPSVHCTVQCHRRLIK*AKGMTF
Trigger: GAAGGTCATGCCTTTTGCCAACTTGATGAGCCTCCT...GTGGCATTGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp CGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGTCGTCTGCACCACCCAGTTCCCTaGGACCAACATCGCCACCTT +
Preference number: 5 (lower is better)
Translates to: RAMPQVMRWSVPLALCRLHHPVP*DQHRHL
Trigger: AAGGTGGCGATGTTGGTCCAAGGGAACTGGGTGGTG...CAGACGACACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp GAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGTTACACCACCCAGTTCCCTaGGACCAACATCGCCACCTT +
Preference number: 5 (lower is better)
Translates to: EALLLVPPFFLGLRFAGLHHPVP*DQHRHL
Trigger: AAGGTGGCGATGTTGGTCCAAGGGAACTGGGTGGTG...TAACCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp CACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGTCGTCACCACCCAGTTCCCTaGGACCAACATCGCCACCTT +
Preference number: 5 (lower is better)
Translates to: HRAMPQVMRWSVPLALCRHHPVP*DQHRHL
Trigger: AAGGTGGCGATGTTGGTCCAAGGGAACTGGGTGGTG...ACGACACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp TGTCCACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTGGGCTGGACGAGTCCTaGGGGTATAGGATGTCACTC +
Preference number: 5 (lower is better)
Translates to: CPLHRAMPQVMRWSVPLAGLDES*GYRMSL
Trigger: GAGTGACATCCTATACCCCAAGGACTCGTCCAGCCC...AGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGTGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp CGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGTCGTCTGGGGCTGGACGAGTCCTaGGGGTATAGGATGTCACTC +
Preference number: 5 (lower is better)
Translates to: RAMPQVMRWSVPLALCRLGLDES*GYRMSL
Trigger: GAGTGACATCCTATACCCCAAGGACTCGTCCAGCCC...CAGACGACACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp CACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGTCGTGGGCTGGACGAGTCCTaGGGGTATAGGATGTCACTC +
Preference number: 5 (lower is better)
Translates to: HRAMPQVMRWSVPLALCRGLDES*GYRMSL
Trigger: GAGTGACATCCTATACCCCAAGGACTCGTCCAGCCC...ACGACACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp GCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGTTAGTATCCTCGGCGCAGAGTTaGGTCACGGTTGCCACCTCT +
Preference number: 5 (lower is better)
Translates to: ALLLVPPFFLGLRFAGLVSSAQS*VTVATS
Trigger: AGAGGTGGCAACCGTGACCAAACTCTGCGCCGAGGA...TACTAACCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp GTTCCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGAACTCCCAGCCTTTGTaGATCCTCACCACGGCCATG +
Preference number: 5 (lower is better)
Translates to: VPLALCRLKQVEALLLVPNSQPL*ILTTAM
Trigger: CATGGCCGTGGTGAGGATCAACAAAGGCTGGGAGTT...CGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp CCACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGATGAACTCCCAGCCTTaGTTGATCCTCACCACGGCC +
Preference number: 5 (lower is better)
Translates to: PLHRAMPQVMRWSVPLALMNSQP*LILTTA
Trigger: GGCCGTGGTGAGGATCAACAAAGGCTGGGAGTTCAT...CAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp GCTGGCCAAGTGCAGATTGAAGAGGCGCTTGAGTTCGCTCAGCGTGAGCACAAACTTGGTTTTGGCTACTaGGATCCGCTGGTCCCCACA +
Preference number: 5 (lower is better)
Translates to: AGQVQIEEALEFAQREHKLGFGY*DPLVPT
Trigger: TGTGGGGACCAGCGGATCCAAGTAGCCAAAACCAAG...TTTGTGCTCACGCTGAGCGAACTCAAGCGCCTCTTCAATCTGCACTTGGCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564750.5
CDS-3UTR CAA 90 bp GAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGTTATGCTGGGCCTTGGTTTaGGCTACTTGGATCCGCTGG +
Preference number: 5 (lower is better)
Translates to: EALLLVPPFFLGLRFAGLCWALV*ATWIRW
Trigger: CCAGCGGATCCAAGTAGCCAAAACCAAGGCCCAGCA...TAACCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp CGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAATGCCACAGGTCTGGTTCTGCTGGGCCTaGGTTTTGGCTACTTGGATC +
Preference number: 5 (lower is better)
Translates to: RLAEDNPFCPLHRAMPQVWFCWA*VLATWI
Trigger: GATCCAAGTAGCCAAAACCAAGGCCCAGCAGAACCA...GACCTGTGGCATTGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp GTCGAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGTGGTTCTGCTGGGCCTaGGTTTTGGCTACTTGGATC +
Preference number: 5 (lower is better)
Translates to: VEALLLVPPFFLGLRFAGWFCWA*VLATWI
Trigger: GATCCAAGTAGCCAAAACCAAGGCCCAGCAGAACCA...CCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTCGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp CTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCTTCTGGTTCTGCTGGGCCTaGGTTTTGGCTACTTGGATC +
Preference number: 5 (lower is better)
Translates to: LALCRLKQVEALLLVPPFWFCWA*VLATWI
Trigger: GATCCAAGTAGCCAAAACCAAGGCCCAGCAGAACCA...GAAGGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp TTTCAAATTGTACTGCAAAGAAGGTCCCAGCTGGTCTCTTCTGGGAGTGATCTACTCACGGGCTCCTCCTaGATCCGCACACCGGGCGGG +
Preference number: 5 (lower is better)
Translates to: FQIVLQRRSQLVSSGSDLLTGSS*IRTPGG
Trigger: CCCGCCCGGTGTGCGGATCAAGGAGGAGCCCGTGAG...TAGATCACTCCCAGAAGAGACCAGCTGGGACCTTCTTTGCAGTACAATTTGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp CAAATTGTACTGCAAAGAAGGTCCCAGCTGGTCTCTTCTGGGAGTGATCTAACTTGGGGCGGGTGCCCGTaGAAGCTGTCTGTGCCCGCA +
Preference number: 5 (lower is better)
Translates to: QIVLQRRSQLVSSGSDLTWGGCP*KLSVPA
Trigger: TGCGGGCACAGACAGCTTCAACGGGCACCCGCCCCA...AGTTAGATCACTCCCAGAAGAGACCAGCTGGGACCTTCTTTGCAGTACAATTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp CCACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGAGATTGAAGAGGCGCTaGAGTTCGCTCAGCGTGAGC +
Preference number: 5 (lower is better)
Translates to: PLHRAMPQVMRWSVPLALRLKRR*SSLSVS
Trigger: GCTCACGCTGAGCGAACTCAAGCGCCTCTTCAATCT...CAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGTGG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp GTTCCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGAGATTGAAGAGGCGCTaGAGTTCGCTCAGCGTGAGC +
Preference number: 5 (lower is better)
Translates to: VPLALCRLKQVEALLLVPRLKRR*SSLSVS
Trigger: GCTCACGCTGAGCGAACTCAAGCGCCTCTTCAATCT...CGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp CCACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGCTGGCCAAGTGCAGATaGAAGAGGCGCTTGAGTTCG +
Preference number: 5 (lower is better)
Translates to: PLHRAMPQVMRWSVPLALLAKCR*KRRLSS
Trigger: CGAACTCAAGCGCCTCTTCAATCTGCACTTGGCCAG...CAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGTGG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp GTCGAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGTTCCGCCCTTCTTCCTaGGGCTTAGATTTGCTGGGT +
Preference number: 5 (lower is better)
Translates to: VEALLLVPPFFLGLRFAGFRPSS*GLDLLG
Trigger: ACCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAA...CCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTCGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp TCCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCTTCCGCCCTTCTTCCTaGGGCTTAGATTTGCTGGGT +
Preference number: 5 (lower is better)
Translates to: SSCSVSSEASRGPTSGSAFRPSS*GLDLLG
Trigger: ACCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAA...GGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp CCACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGGCAATCTGCTCCCCTTaGCTTCTGCTGCTTGGGCTT +
Preference number: 5 (lower is better)
Translates to: PLHRAMPQVMRWSVPLALAICSP*LLLLGL
Trigger: AAGCCCAAGCAGCAGAAGCAAAGGGGAGCAGATTGC...CAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564750.5
CDS CCA 90 bp GATGAGAAAACCCATGGCCTTGTTTGTAGACCAAGAGACGAGGAGTaGGTAGGAGCTCTGGGACCAGCTAGTTCAGGAGGGCAGAGTCTG +
Preference number: 5 (lower is better)
Translates to: DEKTHGLVCRPRDEE*VGALGPASSGGQSL
Trigger: CAGACTCTGCCCTCCTGAACTAGCTGGTCCCAGAGCTCCTACCCACTCCTCGTCTCTTGGTCTACAAACAAGGCCATGGGTTTTCTCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563766.5
CDS CCA 90 bp TACCTTGCCTGTAGAGTGCAGCGGCATAACGGGATGTGTTACTGGTaGTCTGGGAAGAGCAGAAGGTCTGCTTGTCCATCAGCTTCCTGG +
Preference number: 5 (lower is better)
Translates to: YLACRVQRHNGMCYW*SGKSRRSACPSASW
Trigger: CCAGGAAGCTGATGGACAAGCAGACCTTCTGCTCTTCCCAGACCACCAGTAACACATCCCGTTATGCCGCTGCACTCTACAGGCAAGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563766.5
CDS CCA 90 bp ATATCCTCCGTACAGTGGGGAAGCTGCGTCTGTTTCCCATCAGCCTaGCACCAACTCAACTGTGCTTTAACACCCAGAGTCCTCCCTCCT +
Preference number: 5 (lower is better)
Translates to: ISSVQWGSCVCFPSA*HQLNCALTPRVLPP
Trigger: AGGAGGGAGGACTCTGGGTGTTAAAGCACAGTTGAGTTGGTGCCAGGCTGATGGGAAACAGACGCAGCTTCCCCACTGTACGGAGGATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564061.5
CDS-3UTR CAA 90 bp GTTCCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGGGGTCATCCTCTTCATaGGCCATACTAGAGGAGAGC +
Preference number: 5 (lower is better)
Translates to: VPLALCRLKQVEALLLVPGSSSS*AILEES
Trigger: GCTCTCCTCTAGTATGGCCAATGAAGAGGATGACCC...CGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp CACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGTCGTTGCTTGGGCTTGATCTaGGCTGAGAGGTGCGGAATG +
Preference number: 5 (lower is better)
Translates to: HRAMPQVMRWSVPLALCRCLGLI*AERCGM
Trigger: CATTCCGCACCTCTCAGCCAAGATCAAGCCCAAGCA...ACGACACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp TGTCCACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTTGCTTGGGCTTGATCTaGGCTGAGAGGTGCGGAATG +
Preference number: 5 (lower is better)
Translates to: CPLHRAMPQVMRWSVPLACLGLI*AERCGM
Trigger: CATTCCGCACCTCTCAGCCAAGATCAAGCCCAAGCA...AGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGTGGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp TGTCCACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTTTCTGCTGCTTGGGCTaGATCTTGGCTGAGAGGTGC +
Preference number: 5 (lower is better)
Translates to: CPLHRAMPQVMRWSVPLAFCCLG*ILAERC
Trigger: GCACCTCTCAGCCAAGATCAAGCCCAAGCAGCAGAA...AGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGTGGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp GTTCCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGTCTACCTTCTGCTGCTaGGGCTTGATCTTGGCTGAG +
Preference number: 5 (lower is better)
Translates to: VPLALCRLKQVEALLLVPSTFCC*GLILAE
Trigger: CTCAGCCAAGATCAAGCCCAAGCAGCAGAAGGTAGA...CGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000564209.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp CTTAAGCTGACCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTTCTACCTTCTGCTGCTaGGGCTTGATCTTGGCTGAG +
Preference number: 5 (lower is better)
Translates to: LKLTLRLAEDNPFCPLHRSTFCC*GLILAE
Trigger: CTCAGCCAAGATCAAGCCCAAGCAGCAGAAGGTAGA...ACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGGTCAGCTTAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000564209.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp GTTCCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGGAGCAGAAGGTCTGCTaGTCCATCAGCTTCGAGGAA +
Preference number: 5 (lower is better)
Translates to: VPLALCRLKQVEALLLVPEQKVC*SISFEE
Trigger: TTCCTCGAAGCTGATGGACAAGCAGACCTTCTGCTC...CGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp GTAACGCTGAGCCCAACAAGATCGCCTTCCTGTAACCATTTGAAGATAGCACCACAGGTGGAGCTCACCTaGCCTGTAGAGTGCAGCGGC +
Preference number: 5 (lower is better)
Translates to: VTLSPTRSPSCNHLKIAPQVELT*PVECSG
Trigger: GCCGCTGCACTCTACAGGCAAGGTGAGCTCCACCTG...TGGTGCTATCTTCAAATGGTTACAGGAAGGCGATCTTGTTGGGCTCAGCGTTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp GAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGTTATACTCACTGGGTGACTaGACGAGCTCCGTGTTCTCC +
Preference number: 5 (lower is better)
Translates to: EALLLVPPFFLGLRFAGLYSLGD*TSSVFS
Trigger: GGAGAACACGGAGCTCGTCAAGTCACCCAGTGAGTA...TAACCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp TGTCCACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTTACTCACTGGGTGACTaGACGAGCTCCGTGTTCTCC +
Preference number: 5 (lower is better)
Translates to: CPLHRAMPQVMRWSVPLAYSLGD*TSSVFS
Trigger: GGAGAACACGGAGCTCGTCAAGTCACCCAGTGAGTA...AGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGTGGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp TCCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCAGGAGGCTCATCAAGTaGGCAAAAGGCATGACCTTC +
Preference number: 5 (lower is better)
Translates to: SSCSVSSEASRGPTSGSARRLIK*AKGMTF
Trigger: GAAGGTCATGCCTTTTGCCAACTTGATGAGCCTCCT...GGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp GTCGAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGAGGAGGCTCATCAAGTaGGCAAAAGGCATGACCTTC +
Preference number: 5 (lower is better)
Translates to: VEALLLVPPFFLGLRFAGRRLIK*AKGMTF
Trigger: GAAGGTCATGCCTTTTGCCAACTTGATGAGCCTCCT...CCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTCGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp CTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCTTCAGGAGGCTCATCAAGTaGGCAAAAGGCATGACCTTC +
Preference number: 5 (lower is better)
Translates to: LALCRLKQVEALLLVPPFRRLIK*AKGMTF
Trigger: GAAGGTCATGCCTTTTGCCAACTTGATGAGCCTCCT...GAAGGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp GCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGTTAGTAGGGCTGGACGAGTCCTaGGGGTATAGGATGTCACTC +
Preference number: 5 (lower is better)
Translates to: ALLLVPPFFLGLRFAGLVGLDES*GYRMSL
Trigger: GAGTGACATCCTATACCCCAAGGACTCGTCCAGCCC...TACTAACCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp CGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGTCGTCTGAACTCCCAGCCTTTGTaGATCCTCACCACGGCCATG +
Preference number: 5 (lower is better)
Translates to: RAMPQVMRWSVPLALCRLNSQPL*ILTTAM
Trigger: CATGGCCGTGGTGAGGATCAACAAAGGCTGGGAGTT...CAGACGACACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp GAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGTTAATGAACTCCCAGCCTTaGTTGATCCTCACCACGGCC +
Preference number: 5 (lower is better)
Translates to: EALLLVPPFFLGLRFAGLMNSQP*LILTTA
Trigger: GGCCGTGGTGAGGATCAACAAAGGCTGGGAGTTCAT...TAACCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp ACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGATGAACTCCCAGCCTTaGTTGATCCTCACCACGGCC +
Preference number: 5 (lower is better)
Translates to: TAPCNATGHEMVSSSCSVMNSQP*LILTTA
Trigger: GGCCGTGGTGAGGATCAACAAAGGCTGGGAGTTCAT...CACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp TGTCCACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTATGAACTCCCAGCCTTaGTTGATCCTCACCACGGCC +
Preference number: 5 (lower is better)
Translates to: CPLHRAMPQVMRWSVPLAMNSQP*LILTTA
Trigger: GGCCGTGGTGAGGATCAACAAAGGCTGGGAGTTCAT...AGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGTGGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp CGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGTCGTCTGATGAACTCCCAGCCTTaGTTGATCCTCACCACGGCC +
Preference number: 5 (lower is better)
Translates to: RAMPQVMRWSVPLALCRLMNSQP*LILTTA
Trigger: GGCCGTGGTGAGGATCAACAAAGGCTGGGAGTTCAT...CAGACGACACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp CGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGTCGTCTGCTTGGTTTTGGCTACTaGGATCCGCTGGTCCCCACA +
Preference number: 5 (lower is better)
Translates to: RAMPQVMRWSVPLALCRLLGFGY*DPLVPT
Trigger: TGTGGGGACCAGCGGATCCAAGTAGCCAAAACCAAG...CAGACGACACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp TTTCAAATTGTACTGCAAAGAAGGTCCCAGCTGGTCTCTTCTGGGAGTGATCTACCGAGAGGCAGCCCGTaGGCCAGCTTGCTGTGGAGG +
Preference number: 5 (lower is better)
Translates to: FQIVLQRRSQLVSSGSDLPRGSP*ASLLWR
Trigger: CCTCCACAGCAAGCTGGCCAACGGGCTGCCTCTCGG...TAGATCACTCCCAGAAGAGACCAGCTGGGACCTTCTTTGCAGTACAATTTGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp GAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGTTAAGATTGAAGAGGCGCTaGAGTTCGCTCAGCGTGAGC +
Preference number: 5 (lower is better)
Translates to: EALLLVPPFFLGLRFAGLRLKRR*SSLSVS
Trigger: GCTCACGCTGAGCGAACTCAAGCGCCTCTTCAATCT...TAACCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp CGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGTCGTCTGAGATTGAAGAGGCGCTaGAGTTCGCTCAGCGTGAGC +
Preference number: 5 (lower is better)
Translates to: RAMPQVMRWSVPLALCRLRLKRR*SSLSVS
Trigger: GCTCACGCTGAGCGAACTCAAGCGCCTCTTCAATCT...CAGACGACACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp ACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGCTGGCCAAGTGCAGATaGAAGAGGCGCTTGAGTTCG +
Preference number: 5 (lower is better)
Translates to: TAPCNATGHEMVSSSCSVLAKCR*KRRLSS
Trigger: CGAACTCAAGCGCCTCTTCAATCTGCACTTGGCCAG...CACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp GAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGTTACTGGCCAAGTGCAGATaGAAGAGGCGCTTGAGTTCG +
Preference number: 5 (lower is better)
Translates to: EALLLVPPFFLGLRFAGLLAKCR*KRRLSS
Trigger: CGAACTCAAGCGCCTCTTCAATCTGCACTTGGCCAG...TAACCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp CAAAATTATGTACGTGACTCGCCTCTTTCTAGTGGACAGTGCTGCTCTGTCTTCGGCACCAGTATCTGCTaGCAACCGGCGGCCAGCACC +
Preference number: 5 (lower is better)
Translates to: QNYVRDSPLSSGQCCSVFGTSIC*QPAAST
Trigger: GGTGCTGGCCGCCGGTTGCAAGCAGATACTGGTGCC...GAAGACAGAGCAGCACTGTCCACTAGAAAGAGGCGAGTCACGTACATAATTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS CCA 90 bp ATAGATGCTGCCTGTAGAGTGCAGCGGCATAACGGGATGTGTTACTaGTGGTCTGGGAAGAGCAGAAGGTCTGCTTGTCCATCAGCTTCG +
Preference number: 5 (lower is better)
Translates to: IDAACRVQRHNGMCY*WSGKSRRSACPSAS
Trigger: CGAAGCTGATGGACAAGCAGACCTTCTGCTCTTCCCAGACCACCAGTAACACATCCCGTTATGCCGCTGCACTCTACAGGCAGCATCTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564256.1
CDS-3UTR CAA 90 bp GCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGTTAGTATGCTTGGGCTTGATCTaGGCTGAGAGGTGCGGAATG +
Preference number: 5 (lower is better)
Translates to: ALLLVPPFFLGLRFAGLVCLGLI*AERCGM
Trigger: CATTCCGCACCTCTCAGCCAAGATCAAGCCCAAGCA...TACTAACCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp TGGGAAGAGCAGAAGGTCTGCTTGTCCATCAGCTTCGAGGAATACGTGCTGGTCTCTACCTTCTGCTGCTaGGGCTTGATCTTGGCTGAG +
Preference number: 5 (lower is better)
Translates to: WEEQKVCLSISFEEYVLVSTFCC*GLILAE
Trigger: CTCAGCCAAGATCAAGCCCAAGCAGCAGAAGGTAGA...GACCAGCACGTATTCCTCGAAGCTGATGGACAAGCAGACCTTCTGCTCTTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561494.5
CDS-3UTR CAA 90 bp ACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGTCTACCTTCTGCTGCTaGGGCTTGATCTTGGCTGAG +
Preference number: 5 (lower is better)
Translates to: TAPCNATGHEMVSSSCSVSTFCC*GLILAE
Trigger: CTCAGCCAAGATCAAGCCCAAGCAGCAGAAGGTAGA...CACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000564209.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp CACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGTCGTGAGCAGAAGGTCTGCTaGTCCATCAGCTTCGAGGAA +
Preference number: 5 (lower is better)
Translates to: HRAMPQVMRWSVPLALCREQKVC*SISFEE
Trigger: TTCCTCGAAGCTGATGGACAAGCAGACCTTCTGCTC...ACGACACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp CGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGTCGTCTGGAGCAGAAGGTCTGCTaGTCCATCAGCTTCGAGGAA +
Preference number: 5 (lower is better)
Translates to: RAMPQVMRWSVPLALCRLEQKVC*SISFEE
Trigger: TTCCTCGAAGCTGATGGACAAGCAGACCTTCTGCTC...CAGACGACACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp TGTCCACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTGAGCAGAAGGTCTGCTaGTCCATCAGCTTCGAGGAA +
Preference number: 5 (lower is better)
Translates to: CPLHRAMPQVMRWSVPLAEQKVC*SISFEE
Trigger: TTCCTCGAAGCTGATGGACAAGCAGACCTTCTGCTC...AGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGTGGACA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp ACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGGAGCAGAAGGTCTGCTaGTCCATCAGCTTCGAGGAA +
Preference number: 5 (lower is better)
Translates to: TAPCNATGHEMVSSSCSVEQKVC*SISFEE
Trigger: TTCCTCGAAGCTGATGGACAAGCAGACCTTCTGCTC...CACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp CCACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGAGGAGGCTCATCAAGTaGGCAAAAGGCATGACCTTC +
Preference number: 5 (lower is better)
Translates to: PLHRAMPQVMRWSVPLALRRLIK*AKGMTF
Trigger: GAAGGTCATGCCTTTTGCCAACTTGATGAGCCTCCT...CAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp GTTCCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGAGGAGGCTCATCAAGTaGGCAAAAGGCATGACCTTC +
Preference number: 5 (lower is better)
Translates to: VPLALCRLKQVEALLLVPRRLIK*AKGMTF
Trigger: GAAGGTCATGCCTTTTGCCAACTTGATGAGCCTCCT...CGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp CTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGCCCTTCGTGCATCCGGCTTCTTaGGCATGGTTTCCTTTACAA +
Preference number: 5 (lower is better)
Translates to: LALCRLKQVEALLLVPPFVHPAS*AWFPLQ
Trigger: TTGTAAAGGAAACCATGCCAAAGAAGCCGGATGCAC...GAAGGGCGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp ACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGTGGTTCTGCTGGGCCTaGGTTTTGGCTACTTGGATC +
Preference number: 5 (lower is better)
Translates to: TAPCNATGHEMVSSSCSVWFCWA*VLATWI
Trigger: GATCCAAGTAGCCAAAACCAAGGCCCAGCAGAACCA...CACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp CCATTAGCTCCGTTCCCTCTAGATACACGTAACGCTGAGCCCAACAAGATCGCCTTCCGCCCTTCTTCCTaGGGCTTAGATTTGCTGGGT +
Preference number: 5 (lower is better)
Translates to: PLAPFPLDTRNAEPNKIAFRPSS*GLDLLG
Trigger: ACCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAA...GGCGATCTTGTTGGGCTCAGCGTTACGTGTATCTAGAGGGAACGGAGCTAATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp TGTCCACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTTTCTGCTGCTTGGGCTaGATCTCCTGTACAACTGGG +
Preference number: 5 (lower is better)
Translates to: CPLHRAMPQVMRWSVPLAFCCLG*ISCTTG
Trigger: CCCAGTTGTACAGGAGATCAAGCCCAAGCAGCAGAA...AGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGTGGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418581.6
CDS TCA 90 bp ACTTATGTTAGCTACTTGTATGTATCTGTGTCCCGGGAGGACAAATaGACTTGGAGCCCCACCCCATCTGGTCAGGCAGTGTCCAGCCAG +
Preference number: 5 (lower is better)
Translates to: TYVSYLYVSVSREDK*TWSPTPSGQAVSSQ
Trigger: CTGGCTGGACACTGCCTGACCAGATGGGGTGGGGCTCCAAGTTCATTTGTCCTCCCGGGACACAGATACATACAAGTAGCTAACATAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563766.5
CDS GCA 90 bp AGCAGCAGAACCAGGAGTTCAAGTCAAGTTCTCGATCTATTCACTTaGCCTGGACCTCAGCTCCCTCATGTACAACACAGAGGTGGCTGG +
Preference number: 5 (lower is better)
Translates to: SSRTRSSSQVLDLFT*PGPQLPHVQHRGGW
Trigger: CCAGCCACCTCTGTGTTGTACATGAGGGAGCTGAGGTCCAGGGCAAGTGAATAGATCGAGAACTTGACTTGAACTCCTGGTTCTGCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564061.5
CDS CCA 90 bp CAGAACCAGGAGTTCAAGTCAAGTTCTCGATCTATTCACTTGCCCTaGACCTCAGCTCCCTCATGTACAACACAGAGGTGGCTGGGATCG +
Preference number: 5 (lower is better)
Translates to: QNQEFKSSSRSIHLP*TSAPSCTTQRWLGS
Trigger: CGATCCCAGCCACCTCTGTGTTGTACATGAGGGAGCTGAGGTCCAGGGCAAGTGAATAGATCGAGAACTTGACTTGAACTCCTGGTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564061.5
CDS-3UTR CAA 90 bp TTTCAAATTGTACTGCAAAGAAGGTCCCAGCTGGTCTCTTCTGGGAGTGATCTACTGGGGGCCACAGGCTaGTCTTTCTCCTCCTCCTGG +
Preference number: 5 (lower is better)
Translates to: FQIVLQRRSQLVSSGSDLLGATG*SFSSSW
Trigger: CCAGGAGGAGGAGAAAGACAAGCCTGTGGCCCCCAG...TAGATCACTCCCAGAAGAGACCAGCTGGGACCTTCTTTGCAGTACAATTTGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp CAAATTGTACTGCAAAGAAGGTCCCAGCTGGTCTCTTCTGGGAGTGATCTAACTTCCTCGGCGCAGAGTTaGGTCACGGTTGCCACCTCT +
Preference number: 5 (lower is better)
Translates to: QIVLQRRSQLVSSGSDLTSSAQS*VTVATS
Trigger: AGAGGTGGCAACCGTGACCAAACTCTGCGCCGAGGA...AGTTAGATCACTCCCAGAAGAGACCAGCTGGGACCTTCTTTGCAGTACAATTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp CCACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGGTGCATCCGGCTTCTTaGGCATGGTTTCCTTTACAA +
Preference number: 5 (lower is better)
Translates to: PLHRAMPQVMRWSVPLALVHPAS*AWFPLQ
Trigger: TTGTAAAGGAAACCATGCCAAAGAAGCCGGATGCAC...CAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp GTTCCTCTTGCTCTGTGTCGTCTGAAGCAAGTCGAGGCCCTACTTCTGGTTCCGGTGCATCCGGCTTCTTaGGCATGGTTTCCTTTACAA +
Preference number: 5 (lower is better)
Translates to: VPLALCRLKQVEALLLVPVHPAS*AWFPLQ
Trigger: TTGTAAAGGAAACCATGCCAAAGAAGCCGGATGCAC...CGGAACCAGAAGTAGGGCCTCGACTTGCTTCAGACGACACAGAGCAAGAGGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp GTGAACTTCCACATAACGAAGTCTCGGCCCCTGCAGAGCACCTCAGCAGGCACGAGTAGTTTGCTACTATaGTCAAGACTGTACTGTCCC +
Preference number: 5 (lower is better)
Translates to: VNFHITKSRPLQSTSAGTSSLLL*SRLYCP
Trigger: GGGACAGTACAGTCTTGACAATAGTAGCAAACTACT...CGTGCCTGCTGAGGTGCTCTGCAGGGGCCGAGACTTCGTTATGTGGAAGTTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564750.5
CDS-3UTR CAA 90 bp GCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGTTAGTATTCCGCCCTTCTTCCTaGGGCTTAGATTTGCTGGGT +
Preference number: 5 (lower is better)
Translates to: ALLLVPPFFLGLRFAGLVFRPSS*GLDLLG
Trigger: ACCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAA...TACTAACCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp ACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGTCTACCTTCTGCTGCTaGGGCTTGATCTCCTGTACA +
Preference number: 5 (lower is better)
Translates to: TAPCNATGHEMVSSSCSVSTFCC*GLISCT
Trigger: TGTACAGGAGATCAAGCCCAAGCAGCAGAAGGTAGA...CACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418581.6
CDS CCA 90 bp TTCAACCAACATTTCCTTGTGCCTATTCTGCAACAGGCCCTGCACTaGGAGGGGGAGCCCACAACCAACCAACTGACCTTCTTTCTACAT +
Preference number: 5 (lower is better)
Translates to: FNQHFLVPILQQALH*EGEPTTNQLTFFLH
Trigger: ATGTAGAAAGAAGGTCAGTTGGTTGGTTGTGGGCTCCCCCTCCCAGTGCAGGGCCTGTTGCAGAATAGGCACAAGGAAATGTTGGTTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563766.5
CDS CCA 90 bp ATTCACTTGCCCTGGACCTCAGCTCCCTCATGTACAACACAGAGGTaGCTGGGATCGGAGGTCTCTTACGTCTTGGATGTGACTACAATA +
Preference number: 5 (lower is better)
Translates to: IHLPWTSAPSCTTQR*LGSEVSYVLDVTTI
Trigger: TATTGTAGTCACATCCAAGACGTAAGAGACCTCCGATCCCAGCCACCTCTGTGTTGTACATGAGGGAGCTGAGGTCCAGGGCAAGTGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564061.5
CDS-3UTR CAA 90 bp CGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGTCGTCTGGTGCATCCGGCTTCTTaGGCATGGTTTCCTTTACAA +
Preference number: 5 (lower is better)
Translates to: RAMPQVMRWSVPLALCRLVHPAS*AWFPLQ
Trigger: TTGTAAAGGAAACCATGCCAAAGAAGCCGGATGCAC...CAGACGACACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp CACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGTCGTGTGCATCCGGCTTCTTaGGCATGGTTTCCTTTACAA +
Preference number: 5 (lower is better)
Translates to: HRAMPQVMRWSVPLALCRVHPAS*AWFPLQ
Trigger: TTGTAAAGGAAACCATGCCAAAGAAGCCGGATGCAC...ACGACACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp GTAACGCTGAGCCCAACAAGATCGCCTTCCTGTAACCATTTGAAGATAGCACCACTTGGTTTTGGCTACTaGGATCCGCTGGTCCCCACA +
Preference number: 5 (lower is better)
Translates to: VTLSPTRSPSCNHLKIAPLGFGY*DPLVPT
Trigger: TGTGGGGACCAGCGGATCCAAGTAGCCAAAACCAAG...TGGTGCTATCTTCAAATGGTTACAGGAAGGCGATCTTGTTGGGCTCAGCGTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp CGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAATGCCACAGGTCAGTAGTTTGCTACTATaGTCAAGACTGTACTGTCCC +
Preference number: 5 (lower is better)
Translates to: RLAEDNPFCPLHRAMPQVSSLLL*SRLYCP
Trigger: GGGACAGTACAGTCTTGACAATAGTAGCAAACTACT...GACCTGTGGCATTGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp CCCTGCGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAATGCCACATCAGGAATTTCAAATaGTACTGCAAAGAAGGTCCC +
Preference number: 5 (lower is better)
Translates to: PCDWLRIIPSVHCTVQCHIRNFK*YCKEGP
Trigger: GGGACCTTCTTTGCAGTACAATTTGAAATTCCTGAT...GTGGCATTGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS TCA 90 bp AGACCAAGCCAACAAGTGTGGGCTGCACCTGCGGGGAAAGGCAAATaGCTGGCTTTAATGGTTTCTTCTCTGCTCACAGAGAATTCACTG +
Preference number: 5 (lower is better)
Translates to: RPSQQVWAAPAGKGK*LALMVSSLLTENSL
Trigger: CAGTGAATTCTCTGTGAGCAGAGAAGAAACCATTAAAGCCAGTCATTTGCCTTTCCCCGCAGGTGCAGCCCACACTTGTTGGCTTGGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563766.5
CDS TCA 90 bp TTCTGCATGGTAAAATGCAGGCGTGCATCGGACTTAGCAAGCAGGTaGAGCGACAATCTAAGCTGCACGGAGATGAGAAGAGGGTGTCAA +
Preference number: 5 (lower is better)
Translates to: FCMVKCRRASDLASR*SDNLSCTEMRRGCQ
Trigger: TTGACACCCTCTTCTCATCTCCGTGCAGCTTAGATTGTCGCTTCACCTGCTTGCTAAGTCCGATGCACGCCTGCATTTTACCATGCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565117.1
CDS-3UTR CAA 90 bp CAAAATTATGTACGTGACTCGCCTCTTTCTAGTGGACAGTGCTGCTCTGTCTTCTTCTGCTGCTTGGGCTaGATCTTGGCTGAGAGGTGC +
Preference number: 5 (lower is better)
Translates to: QNYVRDSPLSSGQCCSVFFCCLG*ILAERC
Trigger: GCACCTCTCAGCCAAGATCAAGCCCAAGCAGCAGAA...GAAGACAGAGCAGCACTGTCCACTAGAAAGAGGCGAGTCACGTACATAATTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp TTTCAAATTGTACTGCAAAGAAGGTCCCAGCTGGTCTCTTCTGGGAGTGATCTAGGGCTGGACGAGTCCTaGGGGTATAGGATGTCACTC +
Preference number: 5 (lower is better)
Translates to: FQIVLQRRSQLVSSGSDLGLDES*GYRMSL
Trigger: GAGTGACATCCTATACCCCAAGGACTCGTCCAGCCC...TAGATCACTCCCAGAAGAGACCAGCTGGGACCTTCTTTGCAGTACAATTTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp CAAATTGTACTGCAAAGAAGGTCCCAGCTGGTCTCTTCTGGGAGTGATCTAACTAACTCCCAGCCTTTGTaGATCCTCACCACGGCCATG +
Preference number: 5 (lower is better)
Translates to: QIVLQRRSQLVSSGSDLTNSQPL*ILTTAM
Trigger: CATGGCCGTGGTGAGGATCAACAAAGGCTGGGAGTT...AGTTAGATCACTCCCAGAAGAGACCAGCTGGGACCTTCTTTGCAGTACAATTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp CAAATTGTACTGCAAAGAAGGTCCCAGCTGGTCTCTTCTGGGAGTGATCTAACTCTTGGTTTTGGCTACTaGGATCCGCTGGTCCCCACA +
Preference number: 5 (lower is better)
Translates to: QIVLQRRSQLVSSGSDLTLGFGY*DPLVPT
Trigger: TGTGGGGACCAGCGGATCCAAGTAGCCAAAACCAAG...AGTTAGATCACTCCCAGAAGAGACCAGCTGGGACCTTCTTTGCAGTACAATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp CAAATTGTACTGCAAAGAAGGTCCCAGCTGGTCTCTTCTGGGAGTGATCTAACTCTGGCCAAGTGCAGATaGAAGAGGCGCTTGAGTTCG +
Preference number: 5 (lower is better)
Translates to: QIVLQRRSQLVSSGSDLTLAKCR*KRRLSS
Trigger: CGAACTCAAGCGCCTCTTCAATCTGCACTTGGCCAG...AGTTAGATCACTCCCAGAAGAGACCAGCTGGGACCTTCTTTGCAGTACAATTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp CCACTGCACCGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGAGTAGTTTGCTACTATaGTCAAGACTGTACTGTCCC +
Preference number: 5 (lower is better)
Translates to: PLHRAMPQVMRWSVPLALSSLLL*SRLYCP
Trigger: GGGACAGTACAGTCTTGACAATAGTAGCAAACTACT...CAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACGGTGCAGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp CGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAATGCCACAGGTCATCAGGAATTTCAAATaGTACTGCAAAGAAGGTCCC +
Preference number: 5 (lower is better)
Translates to: RLAEDNPFCPLHRAMPQVIRNFK*YCKEGP
Trigger: GGGACCTTCTTTGCAGTACAATTTGAAATTCCTGAT...GACCTGTGGCATTGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp TTTCAAATTGTACTGCAAAGAAGGTCCCAGCTGGTCTCTTCTGGGAGTGATCTATGCTTGGGCTTGATCTaGGCTGAGAGGTGCGGAATG +
Preference number: 5 (lower is better)
Translates to: FQIVLQRRSQLVSSGSDLCLGLI*AERCGM
Trigger: CATTCCGCACCTCTCAGCCAAGATCAAGCCCAAGCA...TAGATCACTCCCAGAAGAGACCAGCTGGGACCTTCTTTGCAGTACAATTTGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp AACCATGATTTTTATCATCCTGCCCATGTCAGTATACACTCTCTTTATTATGAGTGGGGCGGGTGCCCGTaGAAGCTGTCTGTGCCCGCA +
Preference number: 5 (lower is better)
Translates to: NHDFYHPAHVSIHSLYYEWGGCP*KLSVPA
Trigger: TGCGGGCACAGACAGCTTCAACGGGCACCCGCCCCA...CTCATAATAAAGAGAGTGTATACTGACATGGGCAGGATGATAAAAATCATGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000299853.10
ENST00000418581.6
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp CGTGCAATGCCACAGGTCATGAGATGGTCAGTTCCTCTTGCTCTGTGTCGTCTGAGTAGTTTGCTACTATaGTCAAGACTGTACTGTCCC +
Preference number: 5 (lower is better)
Translates to: RAMPQVMRWSVPLALCRLSSLLL*SRLYCP
Trigger: GGGACAGTACAGTCTTGACAATAGTAGCAAACTACT...CAGACGACACAGAGCAAGAGGAACTGACCATCTCATGACCTGTGGCATTGCACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp CGACTGGCTGAGGATAATCCCTTCTGTCCACTGCACCGTGCAATGCCACAGGTCTTTGGTTTAATGAAATaGGTGGAGGTCTTAGCAGAT +
Preference number: 5 (lower is better)
Translates to: RLAEDNPFCPLHRAMPQVFGLMK*VEVLAD
Trigger: ATCTGCTAAGACCTCCACCAATTTCATTAAACCAAA...GACCTGTGGCATTGCACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS TCA 90 bp GGGGAGCCCACAACCAACCAACTGACCTTCTTTCTACATCTACATTaGAGTCAACAATGGATGACCAACCCTATACCCCATCAGCCAGAA +
Preference number: 5 (lower is better)
Translates to: GEPTTNQLTFFLHLH*SQQWMTNPIPHQPE
Trigger: TTCTGGCTGATGGGGTATAGGGTTGGTCATCCATTGTTGACTTCAATGTAGATGTAGAAAGAAGGTCAGTTGGTTGGTTGTGGGCTCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563766.5
CDS GCA 90 bp AGGATGAGTGGCTTGAACATATTTCTGCATGGTAAAATGCAGGCGTaGATCGGACTTAGCAAGCAGGTGAAGCGACAATCTAAGCTGCAC +
Preference number: 5 (lower is better)
Translates to: RMSGLNIFLHGKMQA*IGLSKQVKRQSKLH
Trigger: GTGCAGCTTAGATTGTCGCTTCACCTGCTTGCTAAGTCCGATGCACGCCTGCATTTTACCATGCAGAAATATGTTCAAGCCACTCATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565117.1
CDS CCA 90 bp GACTTTGTGTTGCAGTCTCTGATAAAAACCCTCACGCAGCACCTCTaGTTAAAGATGAGCCAAGTCATCTCTAGAGACCCAGCAAGACAG +
Preference number: 5 (lower is better)
Translates to: DFVLQSLIKTLTQHL*LKMSQVISRDPARQ
Trigger: CTGTCTTGCTGGGTCTCTAGAGATGACTTGGCTCATCTTTAACCAGAGGTGCTGCGTGAGGGTTTTTATCAGAGACTGCAACACAAAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565117.1
CDS-3UTR CAA 90 bp CAAAATTATGTACGTGACTCGCCTCTTTCTAGTGGACAGTGCTGCTCTGTCTTCAGGAGGCTCATCAAGTaGGCAAAAGGCATGACCTTC +
Preference number: 5 (lower is better)
Translates to: QNYVRDSPLSSGQCCSVFRRLIK*AKGMTF
Trigger: GAAGGTCATGCCTTTTGCCAACTTGATGAGCCTCCT...GAAGACAGAGCAGCACTGTCCACTAGAAAGAGGCGAGTCACGTACATAATTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp GCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGTTAGTAAGTAGTTTGCTACTATaGTCAAGACTGTACTGTCCC +
Preference number: 5 (lower is better)
Translates to: ALLLVPPFFLGLRFAGLVSSLLL*SRLYCP
Trigger: GGGACAGTACAGTCTTGACAATAGTAGCAAACTACT...TACTAACCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000564209.5
ENST00000564750.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp GAGGCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGTTAATCAGGAATTTCAAATaGTACTGCAAAGAAGGTCCC +
Preference number: 5 (lower is better)
Translates to: EALLLVPPFFLGLRFAGLIRNFK*YCKEGP
Trigger: GGGACCTTCTTTGCAGTACAATTTGAAATTCCTGAT...TAACCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS CCA 90 bp CCCTGTGAGGCCTCCAATACACATTTGCATTTGAGCATTAGAAACTaGGGAGGTAGTACATGGGGAAAAGTAAGCTCAGAGAGGTTTGCT +
Preference number: 5 (lower is better)
Translates to: PCEASNTHLHLSIRN*GGSTWGKVSSERFA
Trigger: AGCAAACCTCTCTGAGCTTACTTTTCCCCATGTACTACCTCCCCAGTTTCTAATGCTCAAATGCAAATGTGTATTGGAGGCCTCACAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564061.5
CDS CCA 90 bp CCAAAGCCCCTCACACACCTGATTGTGCATCCGGCTTCTTTGGCATaGTTTCCTTTACAAGATTATAGACTTTTTCCAGTTTGGCCTGGA +
Preference number: 5 (lower is better)
Translates to: PKPLTHLIVHPASLA*FPLQDYRLFPVWPG
Trigger: TCCAGGCCAAACTGGAAAAAGTCTATAATCTTGTAAAGGAAACCATGCCAAAGAAGCCGGATGCACAATCAGGTGTGTGAGGGGCTTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569787.1
CDS-3UTR CAA 90 bp GAGTGGGGAAATAGCATAGACCGTCATTTAAACCTTCAGACAATTAGTGACTGTTACTCACTGGGTGACTaGACGAGCTCCGTGTTCTCC +
Preference number: 5 (lower is better)
Translates to: EWGNSIDRHLNLQTISDCYSLGD*TSSVFS
Trigger: GGAGAACACGGAGCTCGTCAAGTCACCCAGTGAGTA...ACAGTCACTAATTGTCTGAAGGTTTAAATGACGGTCTATGCTATTTCCCCACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp TTTAAACTAATGTGGTTGCTAGAAACTTTCAAAATTATGTACGTGACTCGCCTCCTGGGGGCCACAGGCTaGTCTTTCTCCTCCTCCTGG +
Preference number: 5 (lower is better)
Translates to: FKLMWLLETFKIMYVTRLLGATG*SFSSSW
Trigger: CCAGGAGGAGGAGAAAGACAAGCCTGTGGCCCCCAG...GAGGCGAGTCACGTACATAATTTTGAAAGTTTCTAGCAACCACATTAGTTTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp GAGTGGGGAAATAGCATAGACCGTCATTTAAACCTTCAGACAATTAGTGACTGTCTTGGTTTTGGCTACTaGGATCCGCTGGTCCCCACA +
Preference number: 5 (lower is better)
Translates to: EWGNSIDRHLNLQTISDCLGFGY*DPLVPT
Trigger: TGTGGGGACCAGCGGATCCAAGTAGCCAAAACCAAG...ACAGTCACTAATTGTCTGAAGGTTTAAATGACGGTCTATGCTATTTCCCCACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp AGAAACTTTCAAAATTATGTACGTGACTCGCCTCTTTCTAGTGGACAGTGCTGCTTCCGCCCTTCTTCCTaGGGCTTAGATTTGCTGGGT +
Preference number: 5 (lower is better)
Translates to: RNFQNYVRDSPLSSGQCCFRPSS*GLDLLG
Trigger: ACCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAA...GCAGCACTGTCCACTAGAAAGAGGCGAGTCACGTACATAATTTTGAAAGTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp GCCCTACTTCTGGTTCCGCCCTTCTTCCTTGGGCTTAGATTTGCTGGGTTAGTAATCAGGAATTTCAAATaGTACTGCAAAGAAGGTCCC +
Preference number: 5 (lower is better)
Translates to: ALLLVPPFFLGLRFAGLVIRNFK*YCKEGP
Trigger: GGGACCTTCTTTGCAGTACAATTTGAAATTCCTGAT...TACTAACCCAGCAAATCTAAGCCCAAGGAAGAAGGGCGGAACCAGAAGTAGGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp GAGTGGGGAAATAGCATAGACCGTCATTTAAACCTTCAGACAATTAGTGACTGTTCTACCTTCTGCTGCTaGGGCTTGATCTTGGCTGAG +
Preference number: 5 (lower is better)
Translates to: EWGNSIDRHLNLQTISDCSTFCC*GLILAE
Trigger: CTCAGCCAAGATCAAGCCCAAGCAGCAGAAGGTAGA...ACAGTCACTAATTGTCTGAAGGTTTAAATGACGGTCTATGCTATTTCCCCACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp GAGTGGGGAAATAGCATAGACCGTCATTTAAACCTTCAGACAATTAGTGACTGTGAGCAGAAGGTCTGCTaGTCCATCAGCTTCGAGGAA +
Preference number: 5 (lower is better)
Translates to: EWGNSIDRHLNLQTISDCEQKVC*SISFEE
Trigger: TTCCTCGAAGCTGATGGACAAGCAGACCTTCTGCTC...ACAGTCACTAATTGTCTGAAGGTTTAAATGACGGTCTATGCTATTTCCCCACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp TTTCAAATTGTACTGCAAAGAAGGTCCCAGCTGGTCTCTTCTGGGAGTGATCTAGTGCATCCGGCTTCTTaGGCATGGTTTCCTTTACAA +
Preference number: 5 (lower is better)
Translates to: FQIVLQRRSQLVSSGSDLVHPAS*AWFPLQ
Trigger: TTGTAAAGGAAACCATGCCAAAGAAGCCGGATGCAC...TAGATCACTCCCAGAAGAGACCAGCTGGGACCTTCTTTGCAGTACAATTTGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS TCA 90 bp AGCTTACACAGCAGTCCTTTAGTACTTTATCCACCTCCTGTTTACTaGGATCTTCTCCACACTCTTGAGTCAACCGAGACTGATCACTCA +
Preference number: 5 (lower is better)
Translates to: SLHSSPLVLYPPPVY*DLLHTLESTETDHS
Trigger: TGAGTGATCAGTCTCGGTTGACTCAAGAGTGTGGAGAAGATCTCAGTAAACAGGAGGTGGATAAAGTACTAAAGGACTGCTGTGTAAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564209.5
CDS TCA 90 bp CAATCTAAGCTGCACGGAGATGAGAAGAGGGTGTCAAAATTGGTGTaGAGTCTTAATGCACAAACATGCCACTGCATCCATGAAACAGGA +
Preference number: 5 (lower is better)
Translates to: QSKLHGDEKRVSKLV*SLNAQTCHCIHETG
Trigger: TCCTGTTTCATGGATGCAGTGGCATGTTTGTGCATTAAGACTTCACACCAATTTTGACACCCTCTTCTCATCTCCGTGCAGCTTAGATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565117.1
CDS-3UTR CAA 90 bp TTTAAACTAATGTGGTTGCTAGAAACTTTCAAAATTATGTACGTGACTCGCCTCTGCTGGGCCTTGGTTTaGGCTACTTGGATCCGCTGG +
Preference number: 5 (lower is better)
Translates to: FKLMWLLETFKIMYVTRLCWALV*ATWIRW
Trigger: CCAGCGGATCCAAGTAGCCAAAACCAAGGCCCAGCA...GAGGCGAGTCACGTACATAATTTTGAAAGTTTCTAGCAACCACATTAGTTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp AACCATGATTTTTATCATCCTGCCCATGTCAGTATACACTCTCTTTATTATGAGTGCTGGGCCTTGGTTTaGGCTACTTGGATCCGCTGG +
Preference number: 5 (lower is better)
Translates to: NHDFYHPAHVSIHSLYYECWALV*ATWIRW
Trigger: CCAGCGGATCCAAGTAGCCAAAACCAAGGCCCAGCA...CTCATAATAAAGAGAGTGTATACTGACATGGGCAGGATGATAAAAATCATGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000299853.10
ENST00000418581.6
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp CAAATTGTACTGCAAAGAAGGTCCCAGCTGGTCTCTTCTGGGAGTGATCTAACTAGTAGTTTGCTACTATaGTCAAGACTGTACTGTCCC +
Preference number: 5 (lower is better)
Translates to: QIVLQRRSQLVSSGSDLTSSLLL*SRLYCP
Trigger: GGGACAGTACAGTCTTGACAATAGTAGCAAACTACT...AGTTAGATCACTCCCAGAAGAGACCAGCTGGGACCTTCTTTGCAGTACAATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS GCA 90 bp AGCATGTGGCTTCTTTCACTTAGCACAATGTTCTCAAGGCTCATCTaGGTGGTAGCATCACTGCTTCATTCTTTTCCATGGTCAAATAAC +
Preference number: 5 (lower is better)
Translates to: SMWLLSLSTMFSRLI*VVASLLHSFPWSNN
Trigger: GTTATTTGACCATGGAAAAGAATGAAGCAGTGATGCTACCACGCAGATGAGCCTTGAGAACATTGTGCTAAGTGAAAGAAGCCACATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563766.5
CDS-3UTR CAA 90 bp TTTAAACTAATGTGGTTGCTAGAAACTTTCAAAATTATGTACGTGACTCGCCTCAACTCCCAGCCTTTGTaGATCCTCACCACGGCCATG +
Preference number: 5 (lower is better)
Translates to: FKLMWLLETFKIMYVTRLNSQPL*ILTTAM
Trigger: CATGGCCGTGGTGAGGATCAACAAAGGCTGGGAGTT...GAGGCGAGTCACGTACATAATTTTGAAAGTTTCTAGCAACCACATTAGTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp AACCATGATTTTTATCATCCTGCCCATGTCAGTATACACTCTCTTTATTATGAGAGATTGAAGAGGCGCTaGAGTTCGCTCAGCGTGAGC +
Preference number: 5 (lower is better)
Translates to: NHDFYHPAHVSIHSLYYERLKRR*SSLSVS
Trigger: GCTCACGCTGAGCGAACTCAAGCGCCTCTTCAATCT...CTCATAATAAAGAGAGTGTATACTGACATGGGCAGGATGATAAAAATCATGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000299853.10
ENST00000418581.6
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp TTTAAACTAATGTGGTTGCTAGAAACTTTCAAAATTATGTACGTGACTCGCCTCTCTACCTTCTGCTGCTaGGGCTTGATCTTGGCTGAG +
Preference number: 5 (lower is better)
Translates to: FKLMWLLETFKIMYVTRLSTFCC*GLILAE
Trigger: CTCAGCCAAGATCAAGCCCAAGCAGCAGAAGGTAGA...GAGGCGAGTCACGTACATAATTTTGAAAGTTTCTAGCAACCACATTAGTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp CAAATTGTACTGCAAAGAAGGTCCCAGCTGGTCTCTTCTGGGAGTGATCTAACTTTTGGTTTAATGAAATaGGTGGAGGTCTTAGCAGAT +
Preference number: 5 (lower is better)
Translates to: QIVLQRRSQLVSSGSDLTFGLMK*VEVLAD
Trigger: ATCTGCTAAGACCTCCACCAATTTCATTAAACCAAA...AGTTAGATCACTCCCAGAAGAGACCAGCTGGGACCTTCTTTGCAGTACAATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp TTTCAAATTGTACTGCAAAGAAGGTCCCAGCTGGTCTCTTCTGGGAGTGATCTATTTGGTTTAATGAAATaGGTGGAGGTCTTAGCAGAT +
Preference number: 5 (lower is better)
Translates to: FQIVLQRRSQLVSSGSDLFGLMK*VEVLAD
Trigger: ATCTGCTAAGACCTCCACCAATTTCATTAAACCAAA...TAGATCACTCCCAGAAGAGACCAGCTGGGACCTTCTTTGCAGTACAATTTGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp AGAAACTTTCAAAATTATGTACGTGACTCGCCTCTTTCTAGTGGACAGTGCTGCTTTGGTTTAATGAAATaGGTGGAGGTCTTAGCAGAT +
Preference number: 5 (lower is better)
Translates to: RNFQNYVRDSPLSSGQCCFGLMK*VEVLAD
Trigger: ATCTGCTAAGACCTCCACCAATTTCATTAAACCAAA...GCAGCACTGTCCACTAGAAAGAGGCGAGTCACGTACATAATTTTGAAAGTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp AACCATGATTTTTATCATCCTGCCCATGTCAGTATACACTCTCTTTATTATGAGAGTAGTTTGCTACTATaGTCAAGACTGTACTGTCCC +
Preference number: 5 (lower is better)
Translates to: NHDFYHPAHVSIHSLYYESSLLL*SRLYCP
Trigger: GGGACAGTACAGTCTTGACAATAGTAGCAAACTACT...CTCATAATAAAGAGAGTGTATACTGACATGGGCAGGATGATAAAAATCATGGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000299853.10
ENST00000418581.6
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp AACCATGATTTTTATCATCCTGCCCATGTCAGTATACACTCTCTTTATTATGAGATCAGGAATTTCAAATaGTACTGCAAAGAAGGTCCC +
Preference number: 5 (lower is better)
Translates to: NHDFYHPAHVSIHSLYYEIRNFK*YCKEGP
Trigger: GGGACCTTCTTTGCAGTACAATTTGAAATTCCTGAT...CTCATAATAAAGAGAGTGTATACTGACATGGGCAGGATGATAAAAATCATGGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000299853.10
ENST00000418581.6
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS-3UTR CAA 90 bp TTTAAACTAATGTGGTTGCTAGAAACTTTCAAAATTATGTACGTGACTCGCCTCATCAGGAATTTCAAATaGTACTGCAAAGAAGGTCCC +
Preference number: 5 (lower is better)
Translates to: FKLMWLLETFKIMYVTRLIRNFK*YCKEGP
Trigger: GGGACCTTCTTTGCAGTACAATTTGAAATTCCTGAT...GAGGCGAGTCACGTACATAATTTTGAAAGTTTCTAGCAACCACATTAGTTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299853.10
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS GCA 72 bp GCGCGGACGGCGGCAACGGCCCAGTTACCCGCGGGCTaGAGAGACGGCGGCGGCCCGGCTCTCCTCTCAGGC +
Preference number: 6 (lower is better)
Translates to: ARTAATAQLPAG*RDGGGPALLSG
Trigger: GCCTGAGAGGAGAGCCGGGCCGCCGCCGTCTCTGCAGCCCGCGGGTAACTGGGCCGTTGCCGCCGTCCGCGC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000561494.5
ENST00000563024.5
ENST00000564209.5
ENST00000564883.5
ENST00000565358.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS TCA 72 bp CTCATAGGACTGCACACGGCGCTGGCGGGCCTGCTCTaGCTCCGGCCGGGAGAACCGCACCTGCGGTGGGAA +
Preference number: 6 (lower is better)
Translates to: LIGLHTALAGLL*LRPGEPHLRWE
Trigger: TTCCCACCGCAGGTGCGGTTCTCCCGGCCGGAGTCAGAGCAGGCCCGCCAGCGCCGTGTGCAGTCCTATGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569757.1
CDS GCA 72 bp CGGGCCTGCTCTGACTCCGGCCGGGAGAACCGCACCTaGGGTGGGAAGGGGAAGAGGTCATACCGTCAGGCC +
Preference number: 6 (lower is better)
Translates to: RACSDSGRENRT*GGKGKRSYRQA
Trigger: GGCCTGACGGTATGACCTCTTCCCCTTCCCACCGCAGGTGCGGTTCTCCCGGCCGGAGTCAGAGCAGGCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569757.1
CDS CCA 72 bp GATGCACAGGGAGGCCGCCAGGACCCAGGCCCAAGCTaGGGCGTGGCGCAGCTGTGGGGAAGCAGCTCATCT +
Preference number: 6 (lower is better)
Translates to: DAQGGRQDPGPS*GVAQLWGSSSS
Trigger: AGATGAGCTGCTTCCCCACAGCTGCGCCACGCCCCAGCTTGGGCCTGGGTCCTGGCGGCCTCCCTGTGCATC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564061.5
CDS GCA 72 bp AGACCCATGTGCTGGGTGGGCAGGAGCTCCGAACTCTaGCAGTACCTCCCACAGGGGGCTGCCTGCCAGCAG +
Preference number: 6 (lower is better)
Translates to: RPMCWVGRSSEL*QYLPQGAACQQ
Trigger: CTGCTGGCAGGCAGCCCCCTGTGGGAGGTACTGGCAGAGTTCGGAGCTCCTGCCCACCCAGCACATGGGTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564061.5
CDS CCA 72 bp CAGGCTTGGGGCCGGAAACTCACGAGGAATACGTGCTaGTCTCGTCGGCGCAGGCCCCGTCCACGTTCAGCG +
Preference number: 6 (lower is better)
Translates to: QAWGRKLTRNTC*SRRRRPRPRSA
Trigger: CGCTGAACGTGGACGGGGCCTGCGCCGACGAGACCAGCACGTATTCCTCGTGAGTTTCCGGCCCCAAGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563766.5
CDS TCA 72 bp TGTGGCCACAGCGCACCCCACCCCCTAGACACTTTCTaGAGTGCCACAGCCAGGGACCAAGGCCGCAGGGCA +
Preference number: 6 (lower is better)
Translates to: CGHSAPHPLDTF*SATARDQGRRA
Trigger: TGCCCTGCGGCCTTGGTCCCTGGCTGTGGCACTTCAGAAAGTGTCTAGGGGGTGGGGTGCGCTGTGGCCACA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563766.5
CDS TCA 72 bp CGGTGGGAAGGGGAAGAGGTCATACCGTCAGGCCTGTaGCCCTTGCTGGACTGCCGTCTCAGCCCCTGCCAG +
Preference number: 6 (lower is better)
Translates to: RWEGEEVIPSGL*PLLDCRLSPCQ
Trigger: CTGGCAGGGGCTGAGACGGCAGTCCAGCAAGGGTCACAGGCCTGACGGTATGACCTCTTCCCCTTCCCACCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569757.1
CDS GCA 72 bp GGACAGGCTTGGGGCCGGAAACTCACGAGGAATACGTaGTGGTCTCGTCGGCGCAGGCCCCGTCCACGTTCA +
Preference number: 6 (lower is better)
Translates to: GQAWGRKLTRNT*WSRRRRPRPRS
Trigger: TGAACGTGGACGGGGCCTGCGCCGACGAGACCAGCACGTATTCCTCGTGAGTTTCCGGCCCCAAGCCTGTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563766.5
CDS GCA 72 bp GAAACCAGGCAGGGGCCCTGTTTCACTAGGCCCTGCTaGAGGCCAGGCAATAGGCCGGGCCTTCAGACACCG +
Preference number: 6 (lower is better)
Translates to: ETRQGPCFTRPC*RPGNRPGLQTP
Trigger: CGGTGTCTGAAGGCCCGGCCTATTGCCTGGCCTGCAGCAGGGCCTAGTGAAACAGGGCCCCTGCCTGGTTTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564061.5
CDS CCA 72 bp CCCCACAGGTGTCTAGCTTTCAGGGCAGGTGGGAGATaGACACCAGGCTGGGGAGGTACTCTCCCTGCCCAG +
Preference number: 6 (lower is better)
Translates to: PHRCLAFRAGGR*TPGWGGTLPAQ
Trigger: CTGGGCAGGGAGAGTACCTCCCCAGCCTGGTGTCCATCTCCCACCTGCCCTGAAAGCTAGACACCTGTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563766.5
CDS CCA 72 bp AAAGGAGCACGGGAAAGGCGTGCCTCAGGCAGCACCTaGCGCTCTCTATCCTCAGCGCAGGGAAACGGTCCC +
Preference number: 6 (lower is better)
Translates to: KGARERRASGST*RSLSSAQGNGP
Trigger: GGGACCGTTTCCCTGCGCTGAGGATAGAGAGCGCCAGGTGCTGCCTGAGGCACGCCTTTCCCGTGCTCCTTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564061.5
CDS CAA 72 bp CATGTCCCCACCGCGGGACACCCAGCCCCGGGTACCTaGCCTGTAGAGTGCAGCGGCATAACGGGATGTGTT +
Preference number: 6 (lower is better)
Translates to: HVPTAGHPAPGT*PVECSGITGCV
Trigger: AACACATCCCGTTATGCCGCTGCACTCTACAGGCAAGGTACCCGGGGCTGGGTGTCCCGCGGTGGGGACATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563766.5
CDS GCA 72 bp GCGGGACACCCAGCCCCGGGTACCTTGCCTGTAGAGTaGAGCGGCATAACGGGATGTGTTACTGGTGGTCTG +
Preference number: 6 (lower is better)
Translates to: AGHPAPGTLPVE*SGITGCVTGGL
Trigger: CAGACCACCAGTAACACATCCCGTTATGCCGCTGCACTCTACAGGCAAGGTACCCGGGGCTGGGTGTCCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563766.5
CDS GCA 72 bp TTGCCCATGTCACACCTAGGCCCACGTGAGAGCAGATaGTCACCAAGCATGGCCTCCCGTGTCCCCACGTGG +
Preference number: 6 (lower is better)
Translates to: LPMSHLGPRESR*SPSMASRVPTW
Trigger: CCACGTGGGGACACGGGAGGCCATGCTTGGTGAGCATCTGCTCTCACGTGGGCCTAGGTGTGACATGGGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564061.5
CDS GCA 72 bp GGCAGAGCCTTGTGGAAAAGGAGCACGGGAAAGGCGTaGCTCAGGCAGCACCTGGCGCTCTCTATCCTCAGC +
Preference number: 6 (lower is better)
Translates to: GRALWKRSTGKA*LRQHLALSILS
Trigger: GCTGAGGATAGAGAGCGCCAGGTGCTGCCTGAGGCACGCCTTTCCCGTGCTCCTTTTCCACAAGGCTCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564061.5
CDS CCA 72 bp GGGAAGAGGTCATACCGTCAGGCCTGTGACCCTTGCTaGACTGCCGTCTCAGCCCCTGCCAGAAGACCAGAG +
Preference number: 6 (lower is better)
Translates to: GKRSYRQACDPC*TAVSAPARRPE
Trigger: CTCTGGTCTTCTGGCAGGGGCTGAGACGGCAGTCCAGCAAGGGTCACAGGCCTGACGGTATGACCTCTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569757.1
CDS GCA 72 bp CAGGCAGGGCTCTACTTACAGGCACCAGTATCTGCTTaGAACCGGCGGCCAGCACCGTGTCCTGTAGCATGC +
Preference number: 6 (lower is better)
Translates to: QAGLYLQAPVSA*NRRPAPCPVAC
Trigger: GCATGCTACAGGACACGGTGCTGGCCGCCGGTTGCAAGCAGATACTGGTGCCTGTAAGTAGAGCCCTGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564061.5
CDS CAA 72 bp GCAGGCAGGGCTCTACTTACAGGCACCAGTATCTGCTaGCAACCGGCGGCCAGCACCGTGTCCTGTAGCATG +
Preference number: 6 (lower is better)
Translates to: AGRALLTGTSIC*QPAASTVSCSM
Trigger: CATGCTACAGGACACGGTGCTGGCCGCCGGTTGCAAGCAGATACTGGTGCCTGTAAGTAGAGCCCTGCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564061.5
CDS TCA 72 bp TGTCCTGCCTGTCCTGGCCCAGCTCATGAAGAAAGGTaGGCTTGTGGAGACCCAGACCCATGTGCTGGGTGG +
Preference number: 6 (lower is better)
Translates to: CPACPGPAHEER*ACGDPDPCAGW
Trigger: CCACCCAGCACATGGGTCTGGGTCTCCACAAGCTCACCTTTCTTCATGAGCTGGGCCAGGACAGGCAGGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564061.5
CDS TCA 72 bp CAGGCCACTTGGTCCAAAGGTAGACCAGGACAAGTGTaGCACAGGCCTGGGTCCTGGAGAGAAGGGGACAGG +
Preference number: 6 (lower is better)
Translates to: QATWSKGRPGQV*HRPGSWREGDR
Trigger: CCTGTCCCCTTCTCTCCAGGACCCAGGCCTGTGTCACACTTGTCCTGGTCTACCTTTGGACCAAGTGGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564061.5
CDS CCA 72 bp CCGGGAGGACAAATGAACTTGGAGCCCCACCCCATCTaGTCAGGCAGTGTCCAGCCAGCAGTCCACAAAGGT +
Preference number: 6 (lower is better)
Translates to: PGGQMNLEPHPI*SGSVQPAVHKG
Trigger: ACCTTTGTGGACTGCTGGCTGGACACTGCCTGACCAGATGGGGTGGGGCTCCAAGTTCATTTGTCCTCCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563766.5
CDS CAA 90 bp GGAGGGCGAGAGACTGGGACCATCAGTCGTTCAACCAACATTTCCTaGTGCCTATTCTGCAACAGGCCCTGCACTGGGAGGGGGAGCCCA +
Preference number: 6 (lower is better)
Translates to: GGRETGTISRSTNIS*CLFCNRPCTGRGSP
Trigger: TGGGCTCCCCCTCCCAGTGCAGGGCCTGTTGCAGAATAGGCACAAGGAAATGTTGGTTGAACGACTGATGGTCCCAGTCTCTCGCCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000563766.5
ENST00000567022.5
CDS GCA 72 bp CCCAGATGCAGGAACATGGGTTCCAATCCCAGCTTCTaGTACTCACCATCTCTGAGGGCCTTGGGCAGCCAC +
Preference number: 6 (lower is better)
Translates to: PRCRNMGSNPSF*YSPSLRALGSH
Trigger: GTGGCTGCCCAAGGCCCTCAGAGATGGTGAGTAGCAGAAGCTGGGATTGGAACCCATGTTCCTGCATCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563282.1
ENST00000564061.5
CDS CCA 72 bp GGCCCAGGGGTGAGTTGCTTGTCCATCTCTACCCCATaGATCCATTTGCTTGCCTCATCCCTCCCTGTCTGC +
Preference number: 6 (lower is better)
Translates to: GPGVSCLSISTP*IHLLASSLPVC
Trigger: GCAGACAGGGAGGGATGAGGCAAGCAAATGGATCCATGGGGTAGAGATGGACAAGCAACTCACCCCTGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000563282.1
ENST00000564061.5
CDS CCA 72 bp AGGCTGGACGCACAGGGTACCACGGTCTCGCAGCTATaGTGTGATGGAGTTGGATCTCAATCCGGTCTGACC +
Preference number: 6 (lower is better)
Translates to: RLDAQGTTVSQL*CDGVGSQSGLT
Trigger: GGTCAGACCGGATTGAGATCCAACTCCATCACACCATAGCTGCGAGACCGTGGTACCCTGTGCGTCCAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561494.5
CDS TCA 72 bp TGCAATACCACACTCAAGGCCTGGCACTGGAAGTGCTaGGAGCACAGCGCTGAGCTGGTCAGCTTGCTTCTG +
Preference number: 6 (lower is better)
Translates to: CNTTLKAWHWKC*EHSAELVSLLL
Trigger: CAGAAGCAAGCTGACCAGCTCAGCGCTGTGCTCTCAGCACTTCCAGTGCCAGGCCTTGAGTGTGGTATTGCA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564061.5
CDS TCA 72 bp TGGGTTCCAATCCCAGCTTCTGCTACTCACCATCTCTaGGGGCCTTGGGCAGCCACAAACCTGTGCCTCTCA +
Preference number: 6 (lower is better)
Translates to: WVPIPASATHHL*GPWAATNLCLS
Trigger: TGAGAGGCACAGGTTTGTGGCTGCCCAAGGCCCTCAGAGATGGTGAGTAGCAGAAGCTGGGATTGGAACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563282.1
ENST00000564061.5
CDS CCA 72 bp CATTTCCTTGTGCCTATTCTGCAACAGGCCCTGCACTaGGAGGGGGAGCCCACAACCAACCAACTGACCTTC +
Preference number: 6 (lower is better)
Translates to: HFLVPILQQALH*EGEPTTNQLTF
Trigger: GAAGGTCAGTTGGTTGGTTGTGGGCTCCCCCTCCCAGTGCAGGGCCTGTTGCAGAATAGGCACAAGGAAATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000563766.5
ENST00000567022.5
CDS CCA 72 bp CCCTGGACCTCAGCTCCCTCATGTACAACACAGAGGTaGCTGGGATCGGAGGTCTCTTACGTCTTGGATGTG +
Preference number: 6 (lower is better)
Translates to: PWTSAPSCTTQR*LGSEVSYVLDV
Trigger: CACATCCAAGACGTAAGAGACCTCCGATCCCAGCCACCTCTGTGTTGTACATGAGGGAGCTGAGGTCCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564061.5
CDS CAA 72 bp GTCCTAGTTTCTATTCCTCATACACAGGGATGGGCCTaGGCCTCAGATCATCACCCAAGGCTGCAGGCCCGC +
Preference number: 6 (lower is better)
Translates to: VLVSIPHTQGWA*ASDHHPRLQAR
Trigger: GCGGGCCTGCAGCCTTGGGTGATGATCTGAGGCCAAGGCCCATCCCTGTGTATGAGGAATAGAAACTAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564061.5
CDS CAA 72 bp AATCCCAGCTTCTGCTACTCACCATCTCTGAGGGCCTaGGGCAGCCACAAACCTGTGCCTCTCACCTCACCA +
Preference number: 6 (lower is better)
Translates to: NPSFCYSPSLRA*GSHKPVPLTSP
Trigger: TGGTGAGGTGAGAGGCACAGGTTTGTGGCTGCCCAAGGCCCTCAGAGATGGTGAGTAGCAGAAGCTGGGATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563282.1
ENST00000564061.5
CDS CAA 90 bp TGCTGCTTGGGCTTGATCTCCTGTACAACTGGGTCATCCTCTTCATaGGCCATACTAGAGGAGAGCCAGCCGCGCAGTCCTTCAGCTCGA +
Preference number: 6 (lower is better)
Translates to: CCLGLISCTTGSSSS*AILEESQPRSPSAR
Trigger: TCGAGCTGAAGGACTGCGCGGCTGGCTCTCCTCTAGTATGGCCAATGAAGAGGATGACCCAGTTGTACAGGAGATCAAGCCCAAGCAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418581.6
CDS TCA 72 bp CGCAATCTGCTCCCCTTTGCTTCTGCTGCTTGGGCTTaGTCTTGGCTGAGAGGTGCGGAATGTCATCGTAGG +
Preference number: 6 (lower is better)
Translates to: RNLLPFASAAWA*SWLRGAECHRR
Trigger: CCTACGATGACATTCCGCACCTCTCAGCCAAGATCAAGCCCAAGCAGCAGAAGCAAAGGGGAGCAGATTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564750.5
CDS GCA 72 bp ACTGGGACCATCAGTCGTTCAACCAACATTTCCTTGTaGCTATTCTGCAACAGGCCCTGCACTGGGAGGGGG +
Preference number: 6 (lower is better)
Translates to: TGTISRSTNISL*LFCNRPCTGRG
Trigger: CCCCCTCCCAGTGCAGGGCCTGTTGCAGAATAGGCACAAGGAAATGTTGGTTGAACGACTGATGGTCCCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563766.5
ENST00000567022.5
CDS GCA 72 bp TCGAGTCTGCAGATATCCTCCGTACAGTGGGGAAGCTaGGTCTGTTTCCCATCAGCCTGGCACCAACTCAAC +
Preference number: 6 (lower is better)
Translates to: SSLQISSVQWGS*VCFPSAWHQLN
Trigger: GTTGAGTTGGTGCCAGGCTGATGGGAAACAGACGCAGCTTCCCCACTGTACGGAGGATATCTGCAGACTCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564061.5
CDS CCA 72 bp GCCTGTAGAGTGCAGCGGCATAACGGGATGTGTTACTaGTGGTCTGGGAAGAGCAGAAGGTCTGCTTGTCCA +
Preference number: 6 (lower is better)
Translates to: ACRVQRHNGMCY*WSGKSRRSACP
Trigger: TGGACAAGCAGACCTTCTGCTCTTCCCAGACCACCAGTAACACATCCCGTTATGCCGCTGCACTCTACAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000563024.5
ENST00000563766.5
ENST00000564061.5
ENST00000564209.5
ENST00000564256.1
ENST00000564750.5
ENST00000565358.5
ENST00000565551.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS CAA 72 bp GGCTTGATCTCCTGTACAACTGGGTCATCCTCTTCATaGGCCATACTAGAGGAGAGCCAGCCGCGCAGTCCT +
Preference number: 6 (lower is better)
Translates to: GLISCTTGSSSS*AILEESQPRSP
Trigger: AGGACTGCGCGGCTGGCTCTCCTCTAGTATGGCCAATGAAGAGGATGACCCAGTTGTACAGGAGATCAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418581.6
CDS CAA 72 bp GAGTGTGCCAGAAAATCTGAAATGTGTGGCTGCACTTaGGGTGCACATGTCCCCCAAGGCCTCCAACGCTGC +
Preference number: 6 (lower is better)
Translates to: ECARKSEMCGCT*GAHVPQGLQRC
Trigger: GCAGCGTTGGAGGCCTTGGGGGACATGTGCACCCAAAGTGCAGCCACACATTTCAGATTTTCTGGCACACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564061.5
CDS CAA 90 bp GCCAAGTACACATCGATCTCCTGTACAACTGGGTCATCCTCTTCATaGGCCATACTAGAGGAGAGCCAGCCGCGCAGTCCTTCAGCTCGA +
Preference number: 6 (lower is better)
Translates to: AKYTSISCTTGSSSS*AILEESQPRSPSAR
Trigger: TCGAGCTGAAGGACTGCGCGGCTGGCTCTCCTCTAGTATGGCCAATGAAGAGGATGACCCAGTTGTACAGGAGATCGATGTGTACTTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000561494.5
ENST00000563766.5
ENST00000564061.5
ENST00000564209.5
ENST00000564883.5
ENST00000567022.5
ENST00000639550.2
ENST00000640588.2
CDS TCA 72 bp AGCTACTTGTATGTATCTGTGTCCCGGGAGGACAAATaGACTTGGAGCCCCACCCCATCTGGTCAGGCAGTG +
Preference number: 6 (lower is better)
Translates to: SYLYVSVSREDK*TWSPTPSGQAV
Trigger: CACTGCCTGACCAGATGGGGTGGGGCTCCAAGTTCATTTGTCCTCCCGGGACACAGATACATACAAGTAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563766.5
CDS TCA 72 bp GCGTGGCGCAGCTGTGGGGAAGCAGCTCATCTTAGCTaGGCAGAAAGGATTCAAAACTCCAGGCCACTATAC +
Preference number: 6 (lower is better)
Translates to: AWRSCGEAAHLS*AERIQNSRPLY
Trigger: GTATAGTGGCCTGGAGTTTTGAATCCTTTCTGCTCAGCTAAGATGAGCTGCTTCCCCACAGCTGCGCCACGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564061.5
CDS TCA 72 bp ACATGTACCATGTCAGTGTGGGTTAGAGGCACTGCCTaGCTCCCAAGCAATCCAGGCCACTTGGTCCAAAGG +
Preference number: 6 (lower is better)
Translates to: TCTMSVWVRGTA*LPSNPGHLVQR
Trigger: CCTTTGGACCAAGTGGCCTGGATTGCTTGGGAGTCAGGCAGTGCCTCTAACCCACACTGACATGGTACATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564061.5
CDS GCA 72 bp ATCAGTCGTTCAACCAACATTTCCTTGTGCCTATTCTaGAACAGGCCCTGCACTGGGAGGGGGAGCCCACAA +
Preference number: 6 (lower is better)
Translates to: ISRSTNISLCLF*NRPCTGRGSPQ
Trigger: TTGTGGGCTCCCCCTCCCAGTGCAGGGCCTGTTGCAGAATAGGCACAAGGAAATGTTGGTTGAACGACTGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000563766.5
ENST00000567022.5
CDS CCA 72 bp CCTCCTGTCCTAGTTTCTATTCCTCATACACAGGGATaGGCCTTGGCCTCAGATCATCACCCAAGGCTGCAG +
Preference number: 6 (lower is better)
Translates to: PPVLVSIPHTQG*ALASDHHPRLQ
Trigger: CTGCAGCCTTGGGTGATGATCTGAGGCCAAGGCCCATCCCTGTGTATGAGGAATAGAAACTAGGACAGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564061.5
CDS CCA 72 bp GTACAGTGGGGAAGCTGCGTCTGTTTCCCATCAGCCTaGCACCAACTCAACTGTGCTTTAACACCCAGAGTC +
Preference number: 6 (lower is better)
Translates to: VQWGSCVCFPSA*HQLNCALTPRV
Trigger: GACTCTGGGTGTTAAAGCACAGTTGAGTTGGTGCCAGGCTGATGGGAAACAGACGCAGCTTCCCCACTGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564061.5
CDS CCA 72 bp AGTGTGCCAGAAAATCTGAAATGTGTGGCTGCACTTTaGGTGCACATGTCCCCCAAGGCCTCCAACGCTGCA +
Preference number: 6 (lower is better)
Translates to: SVPENLKCVAAL*VHMSPKASNAA
Trigger: TGCAGCGTTGGAGGCCTTGGGGGACATGTGCACCCAAAGTGCAGCCACACATTTCAGATTTTCTGGCACACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564061.5
CDS CAA 72 bp ACATCGATCTCCTGTACAACTGGGTCATCCTCTTCATaGGCCATACTAGAGGAGAGCCAGCCGCGCAGTCCT +
Preference number: 6 (lower is better)
Translates to: TSISCTTGSSSS*AILEESQPRSP
Trigger: AGGACTGCGCGGCTGGCTCTCCTCTAGTATGGCCAATGAAGAGGATGACCCAGTTGTACAGGAGATCGATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000561494.5
ENST00000563766.5
ENST00000564061.5
ENST00000564209.5
ENST00000564883.5
ENST00000567022.5
ENST00000639550.2
ENST00000640588.2
CDS CAA 72 bp GTGTTACTGGTGGTCTGGGAAGAGCAGAAGGTCTGCTaGTCCATCAGCTTCGAGGAATACGTGCTGGTCTCG +
Preference number: 6 (lower is better)
Translates to: VLLVVWEEQKVC*SISFEEYVLVS
Trigger: CGAGACCAGCACGTATTCCTCGAAGCTGATGGACAAGCAGACCTTCTGCTCTTCCCAGACCACCAGTAACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000563024.5
ENST00000564061.5
ENST00000564209.5
ENST00000564256.1
ENST00000564750.5
ENST00000565358.5
ENST00000565551.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS CAA 72 bp GTGTTACTGGTGGTCTGGGAAGAGCAGAAGGTCTGCTaGTCCATCAGCTTCCTGGAGCACAGGGAGAAGCAA +
Preference number: 6 (lower is better)
Translates to: VLLVVWEEQKVC*SISFLEHREKQ
Trigger: TTGCTTCTCCCTGTGCTCCAGGAAGCTGATGGACAAGCAGACCTTCTGCTCTTCCCAGACCACCAGTAACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563766.5
CDS TCA 72 bp AGCTATGGTGTGATGGAGTTGGATCTCAATCCGGTCTaGCCCCAGAGCCCCAGCTTTAACTGCTGCACACTT +
Preference number: 6 (lower is better)
Translates to: SYGVMELDLNPV*PQSPSFNCCTL
Trigger: AAGTGTGCAGCAGTTAAAGCTGGGGCTCTGGGGTCAGACCGGATTGAGATCCAACTCCATCACACCATAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561494.5
CDS GCA 72 bp GATGTGTTACTGGTGGTCTGGGAAGAGCAGAAGGTCTaGTTGTCCATCAGCTTCGAGGAATACGTGCTGGTC +
Preference number: 6 (lower is better)
Translates to: DVLLVVWEEQKV*LSISFEEYVLV
Trigger: GACCAGCACGTATTCCTCGAAGCTGATGGACAAGCAGACCTTCTGCTCTTCCCAGACCACCAGTAACACATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000563024.5
ENST00000564061.5
ENST00000564209.5
ENST00000564256.1
ENST00000564750.5
ENST00000565358.5
ENST00000565551.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS CCA 72 bp TGTAGAGTGCAGCGGCATAACGGGATGTGTTACTGGTaGTCTGGGAAGAGCAGAAGGTCTGCTTGTCCATCA +
Preference number: 6 (lower is better)
Translates to: CRVQRHNGMCYW*SGKSRRSACPS
Trigger: TGATGGACAAGCAGACCTTCTGCTCTTCCCAGACCACCAGTAACACATCCCGTTATGCCGCTGCACTCTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000299853.10
ENST00000359210.8
ENST00000418581.6
ENST00000563024.5
ENST00000563766.5
ENST00000564061.5
ENST00000564209.5
ENST00000564256.1
ENST00000564750.5
ENST00000565358.5
ENST00000565551.5
ENST00000615879.4
ENST00000639550.2
ENST00000640588.2
CDS CCA 72 bp GTCCTTCAGCTCGATCTGCAAAGGAGGGCGAGAGACTaGGACCATCAGTCGTTCAACCAACATTTCCTTGTG +
Preference number: 6 (lower is better)
Translates to: VLQLDLQRRARD*DHQSFNQHFLV
Trigger: CACAAGGAAATGTTGGTTGAACGACTGATGGTCCCAGTCTCTCGCCCTCCTTTGCAGATCGAGCTGAAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563766.5
ENST00000567022.5
CDS CCA 72 bp AGAGGAGAGCCAGCCGCGCAGTCCTTCAGCTCGATCTaGTCTATTTGCTCAGGTGTTGTTTGTCTTCTGCAA +
Preference number: 6 (lower is better)
Translates to: RGEPAAQSFSSI*SICSGVVCLLQ
Trigger: TTGCAGAAGACAAACAACACCTGAGCAAATAGACCAGATCGAGCTGAAGGACTGCGCGGCTGGCTCTCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564883.5
CDS CAA 72 bp GAGGGCCCTGGGGACGCTTTAAAGAGGAGCCAGAAGTaGAACAGGAAGACAGACAGTCCAAAGCTCTCTGAT +
Preference number: 6 (lower is better)
Translates to: EGPGDALKRSQK*NRKTDSPKLSD
Trigger: ATCAGAGAGCTTTGGACTGTCTGTCTTCCTGTTCAACTTCTGGCTCCTCTTTAAAGCGTCCCCAGGGCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563766.5
CDS CAA 90 bp AAGCAGCAGAACCAGGAGTTCAAGTCAAGTTCTCGATCTATTCACTaGCCCTGGACCTCAGCTCCCTCATGTACAACACAGAGGTGGCTG +
Preference number: 6 (lower is better)
Translates to: KQQNQEFKSSSRSIH*PWTSAPSCTTQRWL
Trigger: CAGCCACCTCTGTGTTGTACATGAGGGAGCTGAGGTCCAGGGCAAGTGAATAGATCGAGAACTTGACTTGAACTCCTGGTTCTGCTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564061.5
CDS CAA 72 bp GCCAGCCGCGCAGTCCTTCAGCTCGATCTGGTCTATTaGCTCAGGTGTTGTTTGTCTTCTGCAATAGAACGT +
Preference number: 6 (lower is better)
Translates to: ASRAVLQLDLVY*LRCCLSSAIER
Trigger: ACGTTCTATTGCAGAAGACAAACAACACCTGAGCAAATAGACCAGATCGAGCTGAAGGACTGCGCGGCTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564883.5
CDS TCA 72 bp GTAAAATGCAGGCGTGCATCGGACTTAGCAAGCAGGTaGAGCGACAATCTAAGCTGCACGGAGATGAGAAGA +
Preference number: 6 (lower is better)
Translates to: VKCRRASDLASR*SDNLSCTEMRR
Trigger: TCTTCTCATCTCCGTGCAGCTTAGATTGTCGCTTCACCTGCTTGCTAAGTCCGATGCACGCCTGCATTTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565117.1
CDS CCA 72 bp GAGTTCAAGTCAAGTTCTCGATCTATTCACTTGCCCTaGACCTCAGCTCCCTCATGTACAACACAGAGGTGG +
Preference number: 6 (lower is better)
Translates to: EFKSSSRSIHLP*TSAPSCTTQRW
Trigger: CCACCTCTGTGTTGTACATGAGGGAGCTGAGGTCCAGGGCAAGTGAATAGATCGAGAACTTGACTTGAACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564061.5
CDS CCA 72 bp AGGGGAGGGGGCATCTGGGATGGTAGTTTCCAGTCCTaGTTCCATCACACAAGTAGCAATAATGGTTACTAC +
Preference number: 6 (lower is better)
Translates to: RGGGIWDGSFQS*FHHTSSNNGYY
Trigger: GTAGTAACCATTATTGCTACTTGTGTGATGGAACCAGGACTGGAAACTACCATCCCAGATGCCCCCTCCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564061.5
CDS CAA 90 bp GGGGGAGCCCACAACCAACCAACTGACCTTCTTTCTACATCTACATaGAAGTCAACAATGGATGACCAACCCTATACCCCATCAGCCAGA +
Preference number: 6 (lower is better)
Translates to: GGAHNQPTDLLSTST*KSTMDDQPYTPSAR
Trigger: TCTGGCTGATGGGGTATAGGGTTGGTCATCCATTGTTGACTTCAATGTAGATGTAGAAAGAAGGTCAGTTGGTTGGTTGTGGGCTCCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563766.5
CDS CAA 90 bp CGCGCAGTCCTTCAGCTCGATCTGGTCTATTTGCTCAGGTGTTGTTaGTCTTCTGCAATAGAACGTAAGCTCCATGAAGGCTTCTCAGTG +
Preference number: 6 (lower is better)
Translates to: RAVLQLDLVYLLRCC*SSAIERKLHEGFSV
Trigger: CACTGAGAAGCCTTCATGGAGCTTACGTTCTATTGCAGAAGACAAACAACACCTGAGCAAATAGACCAGATCGAGCTGAAGGACTGCGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564883.5
CDS TCA 72 bp CTTCTGCCTCTCCTGTGTTCCTTCAGTTTTCCCATCTaGAATAGATACAGCTTTTCCGCCAGACTCTTGGCC +
Preference number: 6 (lower is better)
Translates to: LLPLLCSFSFPI*NRYSFSARLLA
Trigger: GGCCAAGAGTCTGGCGGAAAAGCTGTATCTATTTCAGATGGGAAAACTGAAGGAACACAGGAGAGGCAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561494.5
CDS GCA 72 bp ACCAGGAGTTCAAGTCAAGTTCTCGATCTATTCACTTaGCCTGGACCTCAGCTCCCTCATGTACAACACAGA +
Preference number: 6 (lower is better)
Translates to: TRSSSQVLDLFT*PGPQLPHVQHR
Trigger: TCTGTGTTGTACATGAGGGAGCTGAGGTCCAGGGCAAGTGAATAGATCGAGAACTTGACTTGAACTCCTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564061.5
CDS CCA 72 bp CACAGAGAATTCACTGCCAGACAGAAGGATAGAGGTTaGCTGGTCCCAGCCATGATTAAAACACTGGAGAAC +
Preference number: 6 (lower is better)
Translates to: HREFTARQKDRG*LVPAMIKTLEN
Trigger: GTTCTCCAGTGTTTTAATCATGGCTGGGACCAGCCAACCTCTATCCTTCTGTCTGGCAGTGAATTCTCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563766.5
CDS CAA 72 bp AACCAGGAGTTCAAGTCAAGTTCTCGATCTATTCACTaGCCCTGGACCTCAGCTCCCTCATGTACAACACAG +
Preference number: 6 (lower is better)
Translates to: NQEFKSSSRSIH*PWTSAPSCTTQ
Trigger: CTGTGTTGTACATGAGGGAGCTGAGGTCCAGGGCAAGTGAATAGATCGAGAACTTGACTTGAACTCCTGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564061.5
CDS CAA 90 bp AAACATCCCCAAACAAGACACCCAAGCCATGCACCTGACTTTGTGTaGCAGTCTCTGATAAAAACCCTCACGCAGCACCTCTGGTTAAAG +
Preference number: 6 (lower is better)
Translates to: KHPQTRHPSHAPDFV*QSLIKTLTQHLWLK
Trigger: CTTTAACCAGAGGTGCTGCGTGAGGGTTTTTATCAGAGACTGCAACACAAAGTCAGGTGCATGGCTTGGGTGTCTTGTTTGGGGATGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565117.1
CDS CAA 90 bp GCTCACAGACTGGCATCTGGGAACCACTGGTTTAGGTTCAAACTATaGGCACATACAGCTTATTTTGTTAGCGTACAGAGTTGGAGCAGG +
Preference number: 6 (lower is better)
Translates to: AHRLASGNHWFRFKL*AHTAYFVSVQSWSR
Trigger: CCTGCTCCAACTCTGTACGCTAACAAAATAAGCTGTATGTGCCAATAGTTTGAACCTAAACCAGTGGTTCCCAGATGCCAGTCTGTGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564061.5
CDS CCA 72 bp TTGCAGTCTCTGATAAAAACCCTCACGCAGCACCTCTaGTTAAAGATGAGCCAAGTCATCTCTAGAGACCCA +
Preference number: 6 (lower is better)
Translates to: LQSLIKTLTQHL*LKMSQVISRDP
Trigger: TGGGTCTCTAGAGATGACTTGGCTCATCTTTAACCAGAGGTGCTGCGTGAGGGTTTTTATCAGAGACTGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565117.1
CDS CAA 90 bp GACCACATTCTGTTTCTCCATGAATCCAGCGGATGGGCATCTGGGTaGTTTCCACTTTTTGGCTATCATGAAGATGCTACTGTGAACAAC +
Preference number: 6 (lower is better)
Translates to: DHILFLHESSGWASG*FPLFGYHEDATVNN
Trigger: GTTGTTCACAGTAGCATCTTCATGATAGCCAAAAAGTGGAAACAACCCAGATGCCCATCCGCTGGATTCATGGAGAAACAGAATGTGGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563766.5
CDS CAA 90 bp CTTTTCCGCCAGACTCTTGGCCAAGTACACATCGATCTGGTCTATTaGCTCAGGTGTTGTTTGTCTTCTGCAATAGAACGTAAGCTCCAT +
Preference number: 6 (lower is better)
Translates to: LFRQTLGQVHIDLVY*LRCCLSSAIERKLH
Trigger: ATGGAGCTTACGTTCTATTGCAGAAGACAAACAACACCTGAGCAAATAGACCAGATCGATGTGTACTTGGCCAAGAGTCTGGCGGAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565358.5
CDS CCA 72 bp ATGGACCACATTCTGTTTCTCCATGAATCCAGCGGATaGGCATCTGGGTTGTTTCCACTTTTTGGCTATCAT +
Preference number: 6 (lower is better)
Translates to: MDHILFLHESSG*ASGLFPLFGYH
Trigger: ATGATAGCCAAAAAGTGGAAACAACCCAGATGCCCATCCGCTGGATTCATGGAGAAACAGAATGTGGTCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563766.5
CDS CCA 72 bp TTTTCCGCCAGACTCTTGGCCAAGTACACATCGATCTaGTCTATTTGCTCAGGTGTTGTTTGTCTTCTGCAA +
Preference number: 6 (lower is better)
Translates to: FSARLLAKYTSI*SICSGVVCLLQ
Trigger: TTGCAGAAGACAAACAACACCTGAGCAAATAGACCAGATCGATGTGTACTTGGCCAAGAGTCTGGCGGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565358.5
CDS CAA 72 bp CTTCAGCTCGATCTGGTCTATTTGCTCAGGTGTTGTTaGTCTTCTGCAATAGAACGTAAGCTCCATGAAGGC +
Preference number: 6 (lower is better)
Translates to: LQLDLVYLLRCC*SSAIERKLHEG
Trigger: GCCTTCATGGAGCTTACGTTCTATTGCAGAAGACAAACAACACCTGAGCAAATAGACCAGATCGAGCTGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564883.5
CDS GCA 72 bp CTTCTTTCACTTAGCACAATGTTCTCAAGGCTCATCTaGGTGGTAGCATCACTGCTTCATTCTTTTCCATGG +
Preference number: 6 (lower is better)
Translates to: LLSLSTMFSRLI*VVASLLHSFPW
Trigger: CCATGGAAAAGAATGAAGCAGTGATGCTACCACGCAGATGAGCCTTGAGAACATTGTGCTAAGTGAAAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563766.5
CDS CAA 72 bp GTACACATCGATCTGGTCTATTTGCTCAGGTGTTGTTaGTCTTCTGCAATAGAACGTAAGCTCCATGAAGGC +
Preference number: 6 (lower is better)
Translates to: VHIDLVYLLRCC*SSAIERKLHEG
Trigger: GCCTTCATGGAGCTTACGTTCTATTGCAGAAGACAAACAACACCTGAGCAAATAGACCAGATCGATGTGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565358.5
CDS CAA 72 bp CAGACTCTTGGCCAAGTACACATCGATCTGGTCTATTaGCTCAGGTGTTGTTTGTCTTCTGCAATAGAACGT +
Preference number: 6 (lower is better)
Translates to: QTLGQVHIDLVY*LRCCLSSAIER
Trigger: ACGTTCTATTGCAGAAGACAAACAACACCTGAGCAAATAGACCAGATCGATGTGTACTTGGCCAAGAGTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565358.5
CDS CAA 90 bp GTAGCATCACTGCTTCATTCTTTTCCATGGTCAAATAACATCCCATaGCGTGAATGGACCACATTCTGTTTCTCCATGAATCCAGCGGAT +
Preference number: 6 (lower is better)
Translates to: VASLLHSFPWSNNIP*REWTTFCFSMNPAD
Trigger: ATCCGCTGGATTCATGGAGAAACAGAATGTGGTCCATTCACGCAATGGGATGTTATTTGACCATGGAAAAGAATGAAGCAGTGATGCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563766.5
CDS TCA 72 bp ACAACCAACCAACTGACCTTCTTTCTACATCTACATTaGAGTCAACAATGGATGACCAACCCTATACCCCAT +
Preference number: 6 (lower is better)
Translates to: TTNQLTFFLHLH*SQQWMTNPIPH
Trigger: ATGGGGTATAGGGTTGGTCATCCATTGTTGACTTCAATGTAGATGTAGAAAGAAGGTCAGTTGGTTGGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563766.5
CDS CAA 90 bp GGAACCACTGGTTTAGGTTCAAACTATTGGCACATACAGCTTATTTaGTTAGCGTACAGAGTTGGAGCAGGATATTTAAAACCGAGTGTG +
Preference number: 6 (lower is better)
Translates to: GTTGLGSNYWHIQLI*LAYRVGAGYLKPSV
Trigger: CACACTCGGTTTTAAATATCCTGCTCCAACTCTGTACGCTAACAAAATAAGCTGTATGTGCCAATAGTTTGAACCTAAACCAGTGGTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564061.5
CDS CAA 72 bp CTGCTTCATTCTTTTCCATGGTCAAATAACATCCCATaGCGTGAATGGACCACATTCTGTTTCTCCATGAAT +
Preference number: 6 (lower is better)
Translates to: LLHSFPWSNNIP*REWTTFCFSMN
Trigger: ATTCATGGAGAAACAGAATGTGGTCCATTCACGCAATGGGATGTTATTTGACCATGGAAAAGAATGAAGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563766.5
CDS TCA 72 bp TGTTTCCACTTTTTGGCTATCATGAAGATGCTACTGTaGACAACTGTGTATGGTTTTGTGTGGACACATGTT +
Preference number: 6 (lower is better)
Translates to: CFHFLAIMKMLL*TTVYGFVWTHV
Trigger: AACATGTGTCCACACAAAACCATACACAGTTGTTCACAGTAGCATCTTCATGATAGCCAAAAAGTGGAAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563766.5