Pregenerated sensors for POLR2C (Homo sapiens)
Ensembl gene IDs: ENSG00000102978Ensembl transcript IDs: ENST00000219252.10, ENST00000562599.5, ENST00000562953.5, ENST00000563115.5, ENST00000563589.1, ENST00000564626.1, ENST00000564651.5, ENST00000567982.5
Found 87 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | GGACCTTCTGGGATCTGGGGAGCACTGCTGCCAATTATTAACAGCAGTCAGGGCACCCCCATATCCAGCTaGTGGCCTGAATCTCCGTTT | + |
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Preference number: 2 (lower is better) Translates to: GPSGIWGALLPIINSSQGTPISS*WPESPF Trigger: AAACGGAGATTCAGGCCAGCAGCTGGATATGGGGGT...GCCCTGACTGCTGTTAATAATTGGCAGCAGTGCTCCCCAGATCCCAGAAGGTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000219252.10 |
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| 3UTR-3UTR GCA 90 bp | ATAAGAACGAACGAAATCATGTCCTCTGCAGCAACATGGACGTGGCTGGAAGCCTTGCCCAGGCCAGAGTaGAGTGGCATGATCTCGGCT | + |
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Preference number: 2 (lower is better) Translates to: IRTNEIMSSAATWTWLEALPRPE*SGMISA Trigger: AGCCGAGATCATGCCACTGCACTCTGGCCTGGGCAA...GGCTTCCAGCCACGTCCATGTTGCTGCAGAGGACATGATTTCGTTCGTTCTTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000562599.5 |
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| 3UTR-3UTR GCA 90 bp | GGACCTTCTGGGATCTGGGGAGCACTGCTGCCAATTATTAACAGCAGTCAGGGCCTGCCTAAACACCACTaGATCCCTGGTAATCTATCT | + |
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Preference number: 2 (lower is better) Translates to: GPSGIWGALLPIINSSQGLPKHH*IPGNLS Trigger: AGATAGATTACCAGGGATGCAGTGGTGTTTAGGCAG...GCCCTGACTGCTGTTAATAATTGGCAGCAGTGCTCCCCAGATCCCAGAAGGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000219252.10 |
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| 3UTR-3UTR GCA 90 bp | TGCAGCCATAAGAACGAACGAAATCATGTCCTCTGCAGCAACATGGACGTGGCTGGGTTCAATCAATTCTaGCTCAGCCTCCCCAGTAGC | + |
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Preference number: 2 (lower is better) Translates to: CSHKNERNHVLCSNMDVAGFNQF*LSLPSS Trigger: GCTACTGGGGAGGCTGAGGCAGAATTGATTGAACCC...AGCCACGTCCATGTTGCTGCAGAGGACATGATTTCGTTCGTTCTTATGGCTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562599.5 |
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| 3UTR-3UTR CCA 90 bp | AAATCATGTCCTCTGCAGCAACATGGACGTGGCTGGAAGCCACTATCTTCTTTTAGCCTCCCCAGTAGCTaGGATTACAGGTGGGAGCCA | + |
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Preference number: 2 (lower is better) Translates to: KSCPLQQHGRGWKPLSSFSLPSS*DYRWEP Trigger: TGGCTCCCACCTGTAATCCCAGCTACTGGGGAGGCT...AAAAGAAGATAGTGGCTTCCAGCCACGTCCATGTTGCTGCAGAGGACATGATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000562599.5 |
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| 3UTR-3UTR CCA 90 bp | AAATCATGTCCTCTGCAGCAACATGGACGTGGCTGGAAGCCACTATCTTCTTTTCAGGCCAGAGTGCAGTaGCATGATCTCGGCTCACTG | + |
|
Preference number: 2 (lower is better) Translates to: KSCPLQQHGRGWKPLSSFQARVQ*HDLGSL Trigger: CAGTGAGCCGAGATCATGCCACTGCACTCTGGCCTG...AAAAGAAGATAGTGGCTTCCAGCCACGTCCATGTTGCTGCAGAGGACATGATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562599.5 |
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| 3UTR-3UTR TCA 90 bp | GGACCTTCTGGGATCTGGGGAGCACTGCTGCCAATTATTAACAGCAGTCAGGGCCTGGTAATCTATCTATaGCCCACTTCTAGTTGGTAC | + |
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Preference number: 2 (lower is better) Translates to: GPSGIWGALLPIINSSQGLVIYL*PTSSWY Trigger: GTACCAACTAGAAGTGGGTCATAGATAGATTACCAG...GCCCTGACTGCTGTTAATAATTGGCAGCAGTGCTCCCCAGATCCCAGAAGGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000219252.10 |
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| 3UTR-3UTR GCA 90 bp | AAATCATGTCCTCTGCAGCAACATGGACGTGGCTGGAAGCCACTATCTTCTTTTATGATCTCGGCTCACTaGAACCTCCACCTTCTGGGT | + |
|
Preference number: 2 (lower is better) Translates to: KSCPLQQHGRGWKPLSSFMISAH*NLHLLG Trigger: ACCCAGAAGGTGGAGGTTGCAGTGAGCCGAGATCAT...AAAAGAAGATAGTGGCTTCCAGCCACGTCCATGTTGCTGCAGAGGACATGATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562599.5 |
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| 3UTR-3UTR CCA 90 bp | AAATCATGTCCTCTGCAGCAACATGGACGTGGCTGGAAGCCACTATCTTCTTTTGCAACCTCCACCTTCTaGGTTCAATCAATTCTGCCT | + |
|
Preference number: 2 (lower is better) Translates to: KSCPLQQHGRGWKPLSSFATSTF*VQSILP Trigger: AGGCAGAATTGATTGAACCCAGAAGGTGGAGGTTGC...AAAAGAAGATAGTGGCTTCCAGCCACGTCCATGTTGCTGCAGAGGACATGATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562599.5 |
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| CDS-3UTR GCA 90 bp | GGACCTTCTGGGATCTGGGGAGCACTGCTGCCAATTATTAACAGCAGTCAGGGCCCTTGCTCCTGCGGCTaGTTCCACCCCCACCCCCAC | + |
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Preference number: 4 (lower is better) Translates to: GPSGIWGALLPIINSSQGPCSCG*FHPHPH Trigger: GTGGGGGTGGGGGTGGAAGCAGCCGCAGGAGCAAGG...GCCCTGACTGCTGTTAATAATTGGCAGCAGTGCTCCCCAGATCCCAGAAGGTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000219252.10 |
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| CDS-3UTR GCA 90 bp | GGACCTTCTGGGATCTGGGGAGCACTGCTGCCAATTATTAACAGCAGTCAGGGCAGGGGCCCTTGCTCCTaGGGCTGCTTCCACCCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GPSGIWGALLPIINSSQGRGPCS*GCFHPH Trigger: GTGGGGGTGGAAGCAGCCGCAGGAGCAAGGGCCCCT...GCCCTGACTGCTGTTAATAATTGGCAGCAGTGCTCCCCAGATCCCAGAAGGTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000219252.10 |
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| CDS-3UTR GCA 90 bp | GGACCTTCTGGGATCTGGGGAGCACTGCTGCCAATTATTAACAGCAGTCAGGGCTGTGGGAGGGGCCCTTaGTCCTGCGGCTGCTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GPSGIWGALLPIINSSQGCGRGP*SCGCFH Trigger: GTGGAAGCAGCCGCAGGAGCAAGGGCCCCTCCCACA...GCCCTGACTGCTGTTAATAATTGGCAGCAGTGCTCCCCAGATCCCAGAAGGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000219252.10 |
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| CDS-3UTR TCA 90 bp | GGACCTTCTGGGATCTGGGGAGCACTGCTGCCAATTATTAACAGCAGTCAGGGCGGACACCTGGGAATTTaGAGCGCTAGCAGGCCAGCC | + |
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Preference number: 4 (lower is better) Translates to: GPSGIWGALLPIINSSQGGHLGI*SASRPA Trigger: GGCTGGCCTGCTAGCGCTTCAAATTCCCAGGTGTCC...GCCCTGACTGCTGTTAATAATTGGCAGCAGTGCTCCCCAGATCCCAGAAGGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000219252.10 |
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| CDS-3UTR CCA 90 bp | GGACCTTCTGGGATCTGGGGAGCACTGCTGCCAATTATTAACAGCAGTCAGGGCCCCTCCGAATCGAATTaGCCACCGCCAGGTCGGTGT | + |
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Preference number: 4 (lower is better) Translates to: GPSGIWGALLPIINSSQGPSESN*PPPGRC Trigger: ACACCGACCTGGCGGTGGCCAATTCGATTCGGAGGG...GCCCTGACTGCTGTTAATAATTGGCAGCAGTGCTCCCCAGATCCCAGAAGGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000219252.10 |
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| CDS-3UTR GCA 90 bp | AAATCATGTCCTCTGCAGCAACATGGACGTGGCTGGAAGCCACTATCTTCTTTTACCAGCCTCCGCGTCTaGTCCGCGGTGACTGCGCGG | + |
|
Preference number: 4 (lower is better) Translates to: KSCPLQQHGRGWKPLSSFTSLRV*SAVTAR Trigger: CCGCGCAGTCACCGCGGAGCAGACGCGGAGGCTGGT...AAAAGAAGATAGTGGCTTCCAGCCACGTCCATGTTGCTGCAGAGGACATGATTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562599.5 |
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| CDS-3UTR CCA 90 bp | GGACCTTCTGGGATCTGGGGAGCACTGCTGCCAATTATTAACAGCAGTCAGGGCGCCATTCCTCGGGCTTaGGGTACACTGTGTGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GPSGIWGALLPIINSSQGAIPRA*GTLCAS Trigger: TGAGGCACACAGTGTACCCCAAGCCCGAGGAATGGC...GCCCTGACTGCTGTTAATAATTGGCAGCAGTGCTCCCCAGATCCCAGAAGGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000219252.10 |
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| CDS-3UTR CCA 90 bp | GGACCTTCTGGGATCTGGGGAGCACTGCTGCCAATTATTAACAGCAGTCAGGGCGGGCTGACAGGACAATaGTTTCAGGACGCAGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GPSGIWGALLPIINSSQGGLTGQ*FQDAES Trigger: GCTCTCTGCGTCCTGAAACCATTGTCCTGTCAGCCC...GCCCTGACTGCTGTTAATAATTGGCAGCAGTGCTCCCCAGATCCCAGAAGGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000219252.10 |
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| CDS-3UTR CCA 90 bp | GGACCTTCTGGGATCTGGGGAGCACTGCTGCCAATTATTAACAGCAGTCAGGGCGGACCTTCTGGGATCTaGGGAGCACTGCTGCCAATT | + |
|
Preference number: 4 (lower is better) Translates to: GPSGIWGALLPIINSSQGGPSGI*GALLPI Trigger: AATTGGCAGCAGTGCTCCCCAGATCCCAGAAGGTCC...GCCCTGACTGCTGTTAATAATTGGCAGCAGTGCTCCCCAGATCCCAGAAGGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000219252.10 |
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| CDS-3UTR CCA 90 bp | GGACCTTCTGGGATCTGGGGAGCACTGCTGCCAATTATTAACAGCAGTCAGGGCTCCCTACAGGTGCACTaGAAACACTCCAGCAGGGAC | + |
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Preference number: 4 (lower is better) Translates to: GPSGIWGALLPIINSSQGSLQVH*KHSSRD Trigger: GTCCCTGCTGGAGTGTTTCCAGTGCACCTGTAGGGA...GCCCTGACTGCTGTTAATAATTGGCAGCAGTGCTCCCCAGATCCCAGAAGGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000219252.10 |
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| CDS-3UTR CCA 90 bp | CTCCACCTTCTGGGTTCAATCAATTCTGCCTCAGCCTCCCCAGTAGCTGGGATTCAGGCCAGAGTGCAGTaGCATGATCTCGGCTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: LHLLGSINSASASPVAGIQARVQ*HDLGSL Trigger: CAGTGAGCCGAGATCATGCCACTGCACTCTGGCCTG...AATCCCAGCTACTGGGGAGGCTGAGGCAGAATTGATTGAACCCAGAAGGTGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562599.5 |
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| CDS-3UTR GCA 90 bp | GGACCTTCTGGGATCTGGGGAGCACTGCTGCCAATTATTAACAGCAGTCAGGGCGGGTTCCACTTGGCATaGTCCTTGCCAAAGCCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: GPSGIWGALLPIINSSQGGFHLA*SLPKPF Trigger: AAAGGGCTTTGGCAAGGAGCATGCCAAGTGGAACCC...GCCCTGACTGCTGTTAATAATTGGCAGCAGTGCTCCCCAGATCCCAGAAGGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000219252.10 |
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| CDS-3UTR CCA 90 bp | ATAAGAACGAACGAAATCATGTCCTCTGCAGCAACATGGACGTGGCTGGAAGCCCCCTCCGAATCGAATTaGCCACCGCCAGGTCGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: IRTNEIMSSAATWTWLEAPSESN*PPPGRC Trigger: ACACCGACCTGGCGGTGGCCAATTCGATTCGGAGGG...GGCTTCCAGCCACGTCCATGTTGCTGCAGAGGACATGATTTCGTTCGTTCTTAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000562599.5 |
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| CDS-3UTR CCA 90 bp | GGACCTTCTGGGATCTGGGGAGCACTGCTGCCAATTATTAACAGCAGTCAGGGCGTGACATGTCGCGTCTaGTCTTCATTGCACCGCACA | + |
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Preference number: 4 (lower is better) Translates to: GPSGIWGALLPIINSSQGVTCRV*SSLHRT Trigger: TGTGCGGTGCAATGAAGACCAGACGCGACATGTCAC...GCCCTGACTGCTGTTAATAATTGGCAGCAGTGCTCCCCAGATCCCAGAAGGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000219252.10 |
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| CDS-3UTR GCA 90 bp | GGACCTTCTGGGATCTGGGGAGCACTGCTGCCAATTATTAACAGCAGTCAGGGCTTGGTTCCCTACAGGTaGACTGGAAACACTCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GPSGIWGALLPIINSSQGLVPYR*TGNTPA Trigger: TGCTGGAGTGTTTCCAGTGCACCTGTAGGGAACCAA...GCCCTGACTGCTGTTAATAATTGGCAGCAGTGCTCCCCAGATCCCAGAAGGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000219252.10 |
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| CDS-3UTR GCA 90 bp | CTCCACCTTCTGGGTTCAATCAATTCTGCCTCAGCCTCCCCAGTAGCTGGGATTATGATCTCGGCTCACTaGAACCTCCACCTTCTGGGT | + |
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Preference number: 4 (lower is better) Translates to: LHLLGSINSASASPVAGIMISAH*NLHLLG Trigger: ACCCAGAAGGTGGAGGTTGCAGTGAGCCGAGATCAT...AATCCCAGCTACTGGGGAGGCTGAGGCAGAATTGATTGAACCCAGAAGGTGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562599.5 |
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| CDS-3UTR CCA 90 bp | GGACCTTCTGGGATCTGGGGAGCACTGCTGCCAATTATTAACAGCAGTCAGGGCGGAGAGAAGTCTAGTTaGTTCCCTACAGGTGCACTG | + |
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Preference number: 4 (lower is better) Translates to: GPSGIWGALLPIINSSQGGEKSS*FPTGAL Trigger: CAGTGCACCTGTAGGGAACCAACTAGACTTCTCTCC...GCCCTGACTGCTGTTAATAATTGGCAGCAGTGCTCCCCAGATCCCAGAAGGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000219252.10 |
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| CDS-3UTR TCA 90 bp | GGACCTTCTGGGATCTGGGGAGCACTGCTGCCAATTATTAACAGCAGTCAGGGCAATCTCCGTTTTTGCTaGAGCAGGCAAGCTGCAGTT | + |
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Preference number: 4 (lower is better) Translates to: GPSGIWGALLPIINSSQGNLRFC*SRQAAV Trigger: AACTGCAGCTTGCCTGCTTCAGCAAAAACGGAGATT...GCCCTGACTGCTGTTAATAATTGGCAGCAGTGCTCCCCAGATCCCAGAAGGTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000219252.10 |
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| CDS-3UTR TCA 90 bp | GGACCTTCTGGGATCTGGGGAGCACTGCTGCCAATTATTAACAGCAGTCAGGGCAAAGGCTATGGCACTTaGTCCTCAACACCAGACATC | + |
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Preference number: 4 (lower is better) Translates to: GPSGIWGALLPIINSSQGKGYGT*SSTPDI Trigger: GATGTCTGGTGTTGAGGATCAAGTGCCATAGCCTTT...GCCCTGACTGCTGTTAATAATTGGCAGCAGTGCTCCCCAGATCCCAGAAGGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000219252.10 |
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| CDS-3UTR GCA 90 bp | GGACCTTCTGGGATCTGGGGAGCACTGCTGCCAATTATTAACAGCAGTCAGGGCACTTGGCATGCTCCTTaGCAAAGCCCTTTTTGGCAT | + |
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Preference number: 4 (lower is better) Translates to: GPSGIWGALLPIINSSQGTWHAP*QSPFWH Trigger: ATGCCAAAAAGGGCTTTGGCAAGGAGCATGCCAAGT...GCCCTGACTGCTGTTAATAATTGGCAGCAGTGCTCCCCAGATCCCAGAAGGTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000219252.10 |
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| CDS-3UTR GCA 90 bp | GGACCTTCTGGGATCTGGGGAGCACTGCTGCCAATTATTAACAGCAGTCAGGGCTCTGGGGAGCACTGCTaGCAATTATTAACAGCAGTC | + |
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Preference number: 4 (lower is better) Translates to: GPSGIWGALLPIINSSQGSGEHC*QLLTAV Trigger: GACTGCTGTTAATAATTGGCAGCAGTGCTCCCCAGA...GCCCTGACTGCTGTTAATAATTGGCAGCAGTGCTCCCCAGATCCCAGAAGGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000219252.10 |
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| CDS-3UTR GCA 90 bp | GGACCTTCTGGGATCTGGGGAGCACTGCTGCCAATTATTAACAGCAGTCAGGGCGGATCTGGGGAGCACTaGTGCCAATTATTAACAGCA | + |
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Preference number: 4 (lower is better) Translates to: GPSGIWGALLPIINSSQGGSGEH*CQLLTA Trigger: TGCTGTTAATAATTGGCAGCAGTGCTCCCCAGATCC...GCCCTGACTGCTGTTAATAATTGGCAGCAGTGCTCCCCAGATCCCAGAAGGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000219252.10 |
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| CDS-3UTR CCA 90 bp | GGACCTTCTGGGATCTGGGGAGCACTGCTGCCAATTATTAACAGCAGTCAGGGCTGCCAAAGCCCTTTTTaGCATAGGCTCGAAGTCTCA | + |
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Preference number: 4 (lower is better) Translates to: GPSGIWGALLPIINSSQGCQSPF*HRLEVS Trigger: TGAGACTTCGAGCCTATGCCAAAAAGGGCTTTGGCA...GCCCTGACTGCTGTTAATAATTGGCAGCAGTGCTCCCCAGATCCCAGAAGGTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000219252.10 |
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| CDS-3UTR GCA 90 bp | ATAAGAACGAACGAAATCATGTCCTCTGCAGCAACATGGACGTGGCTGGAAGCCGGGTTCAATCAATTCTaGCTCAGCCTCCCCAGTAGC | + |
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Preference number: 4 (lower is better) Translates to: IRTNEIMSSAATWTWLEAGFNQF*LSLPSS Trigger: GCTACTGGGGAGGCTGAGGCAGAATTGATTGAACCC...GGCTTCCAGCCACGTCCATGTTGCTGCAGAGGACATGATTTCGTTCGTTCTTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562599.5 |
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| CDS-3UTR GCA 90 bp | AAATCATGTCCTCTGCAGCAACATGGACGTGGCTGGAAGCCACTATCTTCTTTTTTGCCCAGGCCAGAGTaGAGTGGCATGATCTCGGCT | + |
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Preference number: 4 (lower is better) Translates to: KSCPLQQHGRGWKPLSSFLPRPE*SGMISA Trigger: AGCCGAGATCATGCCACTGCACTCTGGCCTGGGCAA...AAAAGAAGATAGTGGCTTCCAGCCACGTCCATGTTGCTGCAGAGGACATGATTT 51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000562599.5 |
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| CDS-3UTR CCA 90 bp | GGACCTTCTGGGATCTGGGGAGCACTGCTGCCAATTATTAACAGCAGTCAGGGCTCTGAACCCAGTCAATaGCTATTATGGGAACCTCAG | + |
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Preference number: 4 (lower is better) Translates to: GPSGIWGALLPIINSSQGSEPSQ*LLWEPQ Trigger: CTGAGGTTCCCATAATAGCCATTGACTGGGTTCAGA...GCCCTGACTGCTGTTAATAATTGGCAGCAGTGCTCCCCAGATCCCAGAAGGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000219252.10 |
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| CDS-3UTR CCA 90 bp | CTCCACCTTCTGGGTTCAATCAATTCTGCCTCAGCCTCCCCAGTAGCTGGGATTGCAACCTCCACCTTCTaGGTTCAATCAATTCTGCCT | + |
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Preference number: 4 (lower is better) Translates to: LHLLGSINSASASPVAGIATSTF*VQSILP Trigger: AGGCAGAATTGATTGAACCCAGAAGGTGGAGGTTGC...AATCCCAGCTACTGGGGAGGCTGAGGCAGAATTGATTGAACCCAGAAGGTGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562599.5 |
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| CDS-3UTR CCA 90 bp | GGACCTTCTGGGATCTGGGGAGCACTGCTGCCAATTATTAACAGCAGTCAGGGCGGGGTTCATGACTGCTaGACAGAGAATGAAATATCA | + |
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Preference number: 4 (lower is better) Translates to: GPSGIWGALLPIINSSQGGVHDC*TENEIS Trigger: TGATATTTCATTCTCTGTCCAGCAGTCATGAACCCC...GCCCTGACTGCTGTTAATAATTGGCAGCAGTGCTCCCCAGATCCCAGAAGGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000219252.10 |
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| CDS-3UTR CCA 90 bp | AAATCATGTCCTCTGCAGCAACATGGACGTGGCTGGAAGCCACTATCTTCTTTTTCCTCTGCAGCAACATaGACGTGGCTGGAAGCCACT | + |
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Preference number: 4 (lower is better) Translates to: KSCPLQQHGRGWKPLSSFSSAAT*TWLEAT Trigger: AGTGGCTTCCAGCCACGTCCATGTTGCTGCAGAGGA...AAAAGAAGATAGTGGCTTCCAGCCACGTCCATGTTGCTGCAGAGGACATGATTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000562599.5 |
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| CDS-3UTR CCA 90 bp | CTCCACCTTCTGGGTTCAATCAATTCTGCCTCAGCCTCCCCAGTAGCTGGGATTTCTGAACCCAGTCAATaGCCAAGTTTCACAAAAGCA | + |
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Preference number: 4 (lower is better) Translates to: LHLLGSINSASASPVAGISEPSQ*PSFTKA Trigger: TGCTTTTGTGAAACTTGGCCATTGACTGGGTTCAGA...AATCCCAGCTACTGGGGAGGCTGAGGCAGAATTGATTGAACCCAGAAGGTGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000562599.5 |
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| CDS-3UTR TCA 90 bp | GGACCTTCTGGGATCTGGGGAGCACTGCTGCCAATTATTAACAGCAGTCAGGGCCTGCTGGACAGAGAATaGAATATCATGTTTATTTGG | + |
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Preference number: 4 (lower is better) Translates to: GPSGIWGALLPIINSSQGLLDRE*NIMFIW Trigger: CCAAATAAACATGATATTTCATTCTCTGTCCAGCAG...GCCCTGACTGCTGTTAATAATTGGCAGCAGTGCTCCCCAGATCCCAGAAGGTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000219252.10 |
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| CDS-3UTR TCA 90 bp | TGCAGCCATAAGAACGAACGAAATCATGTCCTCTGCAGCAACATGGACGTGGCTCACAAAAGCAGTAAGTaGTGCAGCCATAAGAACGAA | + |
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Preference number: 4 (lower is better) Translates to: CSHKNERNHVLCSNMDVAHKSSK*CSHKNE Trigger: TTCGTTCTTATGGCTGCATCACTTACTGCTTTTGTG...AGCCACGTCCATGTTGCTGCAGAGGACATGATTTCGTTCGTTCTTATGGCTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562599.5 |
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| CDS CCA 90 bp | TCAGCCCGAACCAAGGACTGGAAGGAGCCCCAAAGAGTGTGTGGGTaGAGAGCGGGGCAGGAACCCGTGGGCGCGGGAACGAGGAAGGGG | + |
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Preference number: 5 (lower is better) Translates to: SARTKDWKEPQRVCG*RAGQEPVGAGTRKG Trigger: CCCCTTCCTCGTTCCCGCGCCCACGGGTTCCTGCCCCGCTCTCCACCCACACACTCTTTGGGGCTCCTTCCAGTCCTTGGTTCGGGCTGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000564626.1 |
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| CDS CCA 90 bp | TCTCAGCAATGCATACCCAGGACAAGGGTGGACCTAAGTGGCCCGTaGGCGCCAGGGAGGCGGCCACTGAGCCAAGGGCACAGGGTATGG | + |
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Preference number: 5 (lower is better) Translates to: SQQCIPRTRVDLSGP*APGRRPLSQGHRVW Trigger: CCATACCCTGTGCCCTTGGCTCAGTGGCCGCCTCCCTGGCGCCCACGGGCCACTTAGGTCCACCCTTGTCCTGGGTATGCATTGCTGAGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564626.1 |
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| CDS CCA 90 bp | CCATGCTTCTCAGCAATGCATACCCAGGACAAGGGTGGACCTAAGTaGCCCGTGGGCGCCAGGGAGGCGGCCACTGAGCCAAGGGCACAG | + |
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Preference number: 5 (lower is better) Translates to: PCFSAMHTQDKGGPK*PVGAREAATEPRAQ Trigger: CTGTGCCCTTGGCTCAGTGGCCGCCTCCCTGGCGCCCACGGGCCACTTAGGTCCACCCTTGTCCTGGGTATGCATTGCTGAGAAGCATGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564626.1 |
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| CDS CCA 90 bp | CCGTGGGCGCCAGGGAGGCGGCCACTGAGCCAAGGGCACAGGGTATaGTCAAGTCTCCAGCAATGCACTTTTCTCAGCACTACCACCCTC | + |
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Preference number: 5 (lower is better) Translates to: PWAPGRRPLSQGHRV*SSLQQCTFLSTTTL Trigger: GAGGGTGGTAGTGCTGAGAAAAGTGCATTGCTGGAGACTTGACCATACCCTGTGCCCTTGGCTCAGTGGCCGCCTCCCTGGCGCCCACGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564626.1 |
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| CDS-3UTR CAA 90 bp | GGACCTTCTGGGATCTGGGGAGCACTGCTGCCAATTATTAACAGCAGTCAGGGCCGCACGGTAGGCTGGTaGGCGTACGGCATCTCGCCC | + |
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Preference number: 5 (lower is better) Translates to: GPSGIWGALLPIINSSQGRTVGW*AYGISP Trigger: GGGCGAGATGCCGTACGCCAACCAGCCTACCGTGCG...GCCCTGACTGCTGTTAATAATTGGCAGCAGTGCTCCCCAGATCCCAGAAGGTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000219252.10 |
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| CDS TCA 90 bp | CACGAGAGGCTGTGTCTGGTCCCTCCTTCCCGCTGGCCCACACGGTaGCAGGTCAGGAAGACTTACCATCCTGCTCCACGTAGTCATTGG | + |
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Preference number: 5 (lower is better) Translates to: HERLCLVPPSRWPTR*QVRKTYHPAPRSHW Trigger: CCAATGACTACGTGGAGCAGGATGGTAAGTCTTCCTGACCTGTCACCGTGTGGGCCAGCGGGAAGGAGGGACCAGACACAGCCTCTCGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000563115.5 ENST00000567982.5 |
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| CDS-3UTR CAA 90 bp | GGACCTTCTGGGATCTGGGGAGCACTGCTGCCAATTATTAACAGCAGTCAGGGCACCCTCCGAATCGAATaGGCCACCGCCAGGTCGGTG | + |
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Preference number: 5 (lower is better) Translates to: GPSGIWGALLPIINSSQGTLRIE*ATARSV Trigger: CACCGACCTGGCGGTGGCCAATTCGATTCGGAGGGT...GCCCTGACTGCTGTTAATAATTGGCAGCAGTGCTCCCCAGATCCCAGAAGGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000219252.10 |
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| CDS GCA 90 bp | CGGCCACTGAGCCAAGGGCACAGGGTATGGTCAAGTCTCCAGCAATaGACTTTTCTCAGCACTACCACCCTCAGCCCGAACCAAGGACTG | + |
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Preference number: 5 (lower is better) Translates to: RPLSQGHRVWSSLQQ*TFLSTTTLSPNQGL Trigger: CAGTCCTTGGTTCGGGCTGAGGGTGGTAGTGCTGAGAAAAGTGCATTGCTGGAGACTTGACCATACCCTGTGCCCTTGGCTCAGTGGCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564626.1 |
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| CDS-3UTR CAA 90 bp | TGCAGCCATAAGAACGAACGAAATCATGTCCTCTGCAGCAACATGGACGTGGCTCGCACGGTAGGCTGGTaGGCGTACGGCATCTCGCCC | + |
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Preference number: 5 (lower is better) Translates to: CSHKNERNHVLCSNMDVARTVGW*AYGISP Trigger: GGGCGAGATGCCGTACGCCAACCAGCCTACCGTGCG...AGCCACGTCCATGTTGCTGCAGAGGACATGATTTCGTTCGTTCTTATGGCTGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000562599.5 |
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| CDS GCA 90 bp | TCCCCAGTCACCTCCTCTGGCATCCATATCCCAGCACCTCTAGACTaGAATCTGTCAACCAGGGAACGAACACCTGACGAGGTGGTGGCA | + |
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Preference number: 5 (lower is better) Translates to: SPVTSSGIHIPAPLD*NLSTRERTPDEVVA Trigger: TGCCACCACCTCGTCAGGTGTTCGTTCCCTGGTTGACAGATTGCAGTCTAGAGGTGCTGGGATATGGATGCCAGAGGAGGTGACTGGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563115.5 |
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| CDS GCA 90 bp | GTACTCACTCTTTGGCCTGAGGTCAAACACAGGTCAGCACAAGGTTaGCACTGCTCCTTTTGGGGCACCCAAGTTCCTAGAGAGCCTGCC | + |
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Preference number: 5 (lower is better) Translates to: VLTLWPEVKHRSAQG*HCSFWGTQVPREPA Trigger: GGCAGGCTCTCTAGGAACTTGGGTGCCCCAAAAGGAGCAGTGGCAACCTTGTGCTGACCTGTGTTTGACCTCAGGCCAAAGAGTGAGTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000567982.5 |
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| CDS-3UTR CAA 90 bp | ATAAGAACGAACGAAATCATGTCCTCTGCAGCAACATGGACGTGGCTGGAAGCCACCCTCCGAATCGAATaGGCCACCGCCAGGTCGGTG | + |
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Preference number: 5 (lower is better) Translates to: IRTNEIMSSAATWTWLEATLRIE*ATARSV Trigger: CACCGACCTGGCGGTGGCCAATTCGATTCGGAGGGT...GGCTTCCAGCCACGTCCATGTTGCTGCAGAGGACATGATTTCGTTCGTTCTTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000562599.5 |
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| CDS GCA 90 bp | ACTCTTTGGCCTGAGGTCAAACACAGGTCAGCACAAGGTTGCCACTaGTCCTTTTGGGGCACCCAAGTTCCTAGAGAGCCTGCCACATCT | + |
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Preference number: 5 (lower is better) Translates to: TLWPEVKHRSAQGCH*SFWGTQVPREPATS Trigger: AGATGTGGCAGGCTCTCTAGGAACTTGGGTGCCCCAAAAGGAGCAGTGGCAACCTTGTGCTGACCTGTGTTTGACCTCAGGCCAAAGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000567982.5 |
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| CDS CCA 90 bp | TCCACCAGGCATTCATTAGCTGCTCACCTCCCCAGTCACCTCCTCTaGCATCCATATCCCAGCACCTCTAGACTGCAATCTGTCAACCAG | + |
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Preference number: 5 (lower is better) Translates to: STRHSLAAHLPSHLL*HPYPSTSRLQSVNQ Trigger: CTGGTTGACAGATTGCAGTCTAGAGGTGCTGGGATATGGATGCCAGAGGAGGTGACTGGGGAGGTGAGCAGCTAATGAATGCCTGGTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563115.5 |
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| CDS CCA 90 bp | CCTGAGGTCAAACACAGGTCAGCACAAGGTTGCCACTGCTCCTTTTaGGGCACCCAAGTTCCTAGAGAGCCTGCCACATCTCAGTCAACA | + |
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Preference number: 5 (lower is better) Translates to: PEVKHRSAQGCHCSF*GTQVPREPATSQST Trigger: TGTTGACTGAGATGTGGCAGGCTCTCTAGGAACTTGGGTGCCCCAAAAGGAGCAGTGGCAACCTTGTGCTGACCTGTGTTTGACCTCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567982.5 |
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| CDS GCA 90 bp | GATTGCTGGGCTGATTCCACAGCATTAGAGTGGGGCCCAGGTACTTaGATTTTAATAAGACCCACACACACCACACCTCACCTCCCTGCC | + |
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Preference number: 5 (lower is better) Translates to: DCWADSTALEWGPGT*ILIRPTHTTPHLPA Trigger: GGCAGGGAGGTGAGGTGTGGTGTGTGTGGGTCTTATTAAAATGCAAGTACCTGGGCCCCACTCTAATGCTGTGGAATCAGCCCAGCAATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000563589.1 |
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| CDS GCA 90 bp | CATCTCAGTCAACAACAGCCATTTCTATGCCACACCCACCCCAAATaGCTGCCATCACTCCTAAGGGGAACATACCATTCCTCGGGCTTG | + |
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Preference number: 5 (lower is better) Translates to: HLSQQQPFLCHTHPK*LPSLLRGTYHSSGL Trigger: CAAGCCCGAGGAATGGTATGTTCCCCTTAGGAGTGATGGCAGGCATTTGGGGTGGGTGTGGCATAGAAATGGCTGTTGTTGACTGAGATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000562953.5 ENST00000567982.5 |
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| CDS GCA 90 bp | TTCCTAGAGAGCCTGCCACATCTCAGTCAACAACAGCCATTTCTATaGCACACCCACCCCAAATGCCTGCCATCACTCCTAAGGGGAACA | + |
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Preference number: 5 (lower is better) Translates to: FLESLPHLSQQQPFL*HTHPKCLPSLLRGT Trigger: TGTTCCCCTTAGGAGTGATGGCAGGCATTTGGGGTGGGTGTGGCATAGAAATGGCTGTTGTTGACTGAGATGTGGCAGGCTCTCTAGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000562953.5 ENST00000567982.5 |
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| CDS-3UTR CAA 90 bp | GGACCTTCTGGGATCTGGGGAGCACTGCTGCCAATTATTAACAGCAGTCAGGGCCGAGAGTACTGCAGCTaGTCCACAATGTCATCACTA | + |
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Preference number: 5 (lower is better) Translates to: GPSGIWGALLPIINSSQGREYCS*STMSSL Trigger: TAGTGATGACATTGTGGACAAGCTGCAGTACTCTCG...GCCCTGACTGCTGTTAATAATTGGCAGCAGTGCTCCCCAGATCCCAGAAGGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000219252.10 |
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| CDS-3UTR CAA 90 bp | GGACCTTCTGGGATCTGGGGAGCACTGCTGCCAATTATTAACAGCAGTCAGGGCGTGTGCCTCAGGGCATaGTCTGGATCGTATTCAAAA | + |
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Preference number: 5 (lower is better) Translates to: GPSGIWGALLPIINSSQGVCLRA*SGSYSK Trigger: TTTTGAATACGATCCAGACAATGCCCTGAGGCACAC...GCCCTGACTGCTGTTAATAATTGGCAGCAGTGCTCCCCAGATCCCAGAAGGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000219252.10 |
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| CDS GCA 90 bp | GTCAAGGGCCAGGAGAGACATGCTTCTCCAAATTCTGACTTGGAGTaGCACTGCAAGACCACACACATCTGGAAAAACGGTCTAAAGCCA | + |
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Preference number: 5 (lower is better) Translates to: VKGQERHASPNSDLE*HCKTTHIWKNGLKP Trigger: TGGCTTTAGACCGTTTTTCCAGATGTGTGTGGTCTTGCAGTGGCACTCCAAGTCAGAATTTGGAGAAGCATGTCTCTCCTGGCCCTTGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000567982.5 |
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| CDS GCA 90 bp | AAAACAATTCCATGGCCTTTAAAAGAGTCCCTGGGTGATAGAGGGTaGGCAGCACCAACGATGCTAACGATGCCCAAGAGGAATCCAGAA | + |
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Preference number: 5 (lower is better) Translates to: KTIPWPLKESLGDRG*AAPTMLTMPKRNPE Trigger: TTCTGGATTCCTCTTGGGCATCGTTAGCATCGTTGGTGCTGCGCACCCTCTATCACCCAGGGACTCTTTTAAAGGCCATGGAATTGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000563115.5 |
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| CDS CCA 90 bp | TCTCCAAATTCTGACTTGGAGTGCCACTGCAAGACCACACACATCTaGAAAAACGGTCTAAAGCCAATTTTCGAGGAGACCAGGCAGCAC | + |
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Preference number: 5 (lower is better) Translates to: SPNSDLECHCKTTHI*KNGLKPIFEETRQH Trigger: GTGCTGCCTGGTCTCCTCGAAAATTGGCTTTAGACCGTTTTTCCAGATGTGTGTGGTCTTGCAGTGGCACTCCAAGTCAGAATTTGGAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000567982.5 |
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| CDS GCA 90 bp | GGCCAGGAGAGACATGCTTCTCCAAATTCTGACTTGGAGTGCCACTaGAAGACCACACACATCTGGAAAAACGGTCTAAAGCCAATTTTC | + |
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Preference number: 5 (lower is better) Translates to: GQERHASPNSDLECH*KTTHIWKNGLKPIF Trigger: GAAAATTGGCTTTAGACCGTTTTTCCAGATGTGTGTGGTCTTGCAGTGGCACTCCAAGTCAGAATTTGGAGAAGCATGTCTCTCCTGGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000567982.5 |
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| CDS TCA 90 bp | TCAAGATTTAGGAATCACCTGACACTAAACTGCAGATTGCTGGGCTaGTTCCACAGCATTAGAGTGGGGCCCAGGTACTTGCATTTTAAT | + |
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Preference number: 5 (lower is better) Translates to: SRFRNHLTLNCRLLG*FHSIRVGPRYLHFN Trigger: ATTAAAATGCAAGTACCTGGGCCCCACTCTAATGCTGTGGAATCAGCCCAGCAATCTGCAGTTTAGTGTCAGGTGATTCCTAAATCTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000563589.1 |
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| CDS CCA 72 bp | CCGAACCAAGGACTGGAAGGAGCCCCAAAGAGTGTGTaGGTGGAGAGCGGGGCAGGAACCCGTGGGCGCGGG | + |
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Preference number: 6 (lower is better) Translates to: PNQGLEGAPKSV*VESGAGTRGRG Trigger: CCCGCGCCCACGGGTTCCTGCCCCGCTCTCCACCCACACACTCTTTGGGGCTCCTTCCAGTCCTTGGTTCGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000564626.1 |
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| CDS CCA 72 bp | ACCAAGGACTGGAAGGAGCCCCAAAGAGTGTGTGGGTaGAGAGCGGGGCAGGAACCCGTGGGCGCGGGAACG | + |
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Preference number: 6 (lower is better) Translates to: TKDWKEPQRVCG*RAGQEPVGAGT Trigger: CGTTCCCGCGCCCACGGGTTCCTGCCCCGCTCTCCACCCACACACTCTTTGGGGCTCCTTCCAGTCCTTGGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000564626.1 |
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| CDS CCA 72 bp | TCAGCAATGCATACCCAGGACAAGGGTGGACCTAAGTaGCCCGTGGGCGCCAGGGAGGCGGCCACTGAGCCA | + |
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Preference number: 6 (lower is better) Translates to: SAMHTQDKGGPK*PVGAREAATEP Trigger: TGGCTCAGTGGCCGCCTCCCTGGCGCCCACGGGCCACTTAGGTCCACCCTTGTCCTGGGTATGCATTGCTGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564626.1 |
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| CDS CCA 72 bp | AAAGAGTGTGTGGGTGGAGAGCGGGGCAGGAACCCGTaGGCGCGGGAACGAGGAAGGGGAGTCGCTTACCTA | + |
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Preference number: 6 (lower is better) Translates to: KECVGGERGRNP*ARERGRGVAYL Trigger: TAGGTAAGCGACTCCCCTTCCTCGTTCCCGCGCCCACGGGTTCCTGCCCCGCTCTCCACCCACACACTCTTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000564626.1 |
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| CDS TCA 72 bp | CTGTGTCTGGTCCCTCCTTCCCGCTGGCCCACACGGTaGCAGGTCAGGAAGACTTACCATCCTGCTCCACGT | + |
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Preference number: 6 (lower is better) Translates to: LCLVPPSRWPTR*QVRKTYHPAPR Trigger: ACGTGGAGCAGGATGGTAAGTCTTCCTGACCTGTCACCGTGTGGGCCAGCGGGAAGGAGGGACCAGACACAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000563115.5 ENST00000567982.5 |
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| CDS CCA 72 bp | TTCTCAGCACTACCACCCTCAGCCCGAACCAAGGACTaGAAGGAGCCCCAAAGAGTGTGTGGGTGGAGAGCG | + |
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Preference number: 6 (lower is better) Translates to: FSALPPSARTKD*KEPQRVCGWRA Trigger: CGCTCTCCACCCACACACTCTTTGGGGCTCCTTCCAGTCCTTGGTTCGGGCTGAGGGTGGTAGTGCTGAGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564626.1 |
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| CDS CCA 72 bp | CCAGGGAGGCGGCCACTGAGCCAAGGGCACAGGGTATaGTCAAGTCTCCAGCAATGCACTTTTCTCAGCACT | + |
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Preference number: 6 (lower is better) Translates to: PGRRPLSQGHRV*SSLQQCTFLST Trigger: AGTGCTGAGAAAAGTGCATTGCTGGAGACTTGACCATACCCTGTGCCCTTGGCTCAGTGGCCGCCTCCCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564626.1 |
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| CDS GCA 72 bp | CCATGGCCTTTAAAAGAGTCCCTGGGTGATAGAGGGTaGGCAGCACCAACGATGCTAACGATGCCCAAGAGG | + |
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Preference number: 6 (lower is better) Translates to: PWPLKESLGDRG*AAPTMLTMPKR Trigger: CCTCTTGGGCATCGTTAGCATCGTTGGTGCTGCGCACCCTCTATCACCCAGGGACTCTTTTAAAGGCCATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563115.5 |
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| CDS GCA 72 bp | CCTGAGGTCAAACACAGGTCAGCACAAGGTTGCCACTaGTCCTTTTGGGGCACCCAAGTTCCTAGAGAGCCT | + |
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Preference number: 6 (lower is better) Translates to: PEVKHRSAQGCH*SFWGTQVPREP Trigger: AGGCTCTCTAGGAACTTGGGTGCCCCAAAAGGAGCAGTGGCAACCTTGTGCTGACCTGTGTTTGACCTCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000567982.5 |
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| CDS CCA 72 bp | AAACACAGGTCAGCACAAGGTTGCCACTGCTCCTTTTaGGGCACCCAAGTTCCTAGAGAGCCATTCCTCGGG | + |
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Preference number: 6 (lower is better) Translates to: KHRSAQGCHCSF*GTQVPREPFLG Trigger: CCCGAGGAATGGCTCTCTAGGAACTTGGGTGCCCCAAAAGGAGCAGTGGCAACCTTGTGCTGACCTGTGTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564651.5 |
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| CDS GCA 72 bp | ACCTCCTCTGGCATCCATATCCCAGCACCTCTAGACTaGAATCTGTCAACCAGGGAACGAACACCTGACGAG | + |
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Preference number: 6 (lower is better) Translates to: TSSGIHIPAPLD*NLSTRERTPDE Trigger: CTCGTCAGGTGTTCGTTCCCTGGTTGACAGATTGCAGTCTAGAGGTGCTGGGATATGGATGCCAGAGGAGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563115.5 |
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| CDS GCA 72 bp | CTTTGGCCTGAGGTCAAACACAGGTCAGCACAAGGTTaGCACTGCTCCTTTTGGGGCACCCAAGTTCCTAGA | + |
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Preference number: 6 (lower is better) Translates to: LWPEVKHRSAQG*HCSFWGTQVPR Trigger: TCTAGGAACTTGGGTGCCCCAAAAGGAGCAGTGGCAACCTTGTGCTGACCTGTGTTTGACCTCAGGCCAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000567982.5 |
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| CDS CCA 72 bp | TCCCAAAGTGCTGGAATTACAGGCGCGAGCGCGGCCTaGAAGCCATTATCCTATTATGGGAACCTCAGCGAT | + |
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Preference number: 6 (lower is better) Translates to: SQSAGITGASAA*KPLSYYGNLSD Trigger: ATCGCTGAGGTTCCCATAATAGGATAATGGCTTCCAGGCCGCGCTCGCGCCTGTAATTCCAGCACTTTGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000562599.5 |
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| CDS GCA 72 bp | TTTAATAAGACCCACACACACCACACCTCACCTCCCTaGCCAGGTGAATTTAATGCAGGGGGCTCCCTGCTT | + |
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Preference number: 6 (lower is better) Translates to: FNKTHTHHTSPP*PGEFNAGGSLL Trigger: AAGCAGGGAGCCCCCTGCATTAAATTCACCTGGGCAGGGAGGTGAGGTGTGGTGTGTGTGGGTCTTATTAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000563589.1 |
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| CDS CCA 72 bp | CATTCATTAGCTGCTCACCTCCCCAGTCACCTCCTCTaGCATCCATATCCCAGCACCTCTAGACTGCAATCT | + |
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Preference number: 6 (lower is better) Translates to: HSLAAHLPSHLL*HPYPSTSRLQS Trigger: AGATTGCAGTCTAGAGGTGCTGGGATATGGATGCCAGAGGAGGTGACTGGGGAGGTGAGCAGCTAATGAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563115.5 |
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| CDS CCA 72 bp | AGGGCCAGGAGAGACATGCTTCTCCAAATTCTGACTTaGAGTGCCACTGCAAGACCACACACATCTGGAAAA | + |
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Preference number: 6 (lower is better) Translates to: RARRDMLLQILT*SATARPHTSGK Trigger: TTTTCCAGATGTGTGTGGTCTTGCAGTGGCACTCCAAGTCAGAATTTGGAGAAGCATGTCTCTCCTGGCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567982.5 |
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| CDS CAA 72 bp | AAGGGCCAGGAGAGACATGCTTCTCCAAATTCTGACTaGGAGTGCCACTGCAAGACCACACACATCTGGAAA | + |
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Preference number: 6 (lower is better) Translates to: KGQERHASPNSD*ECHCKTTHIWK Trigger: TTTCCAGATGTGTGTGGTCTTGCAGTGGCACTCCAAGTCAGAATTTGGAGAAGCATGTCTCTCCTGGCCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567982.5 |
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| CDS CAA 90 bp | AAGTCAGTCAAGGGCCAGGAGAGACATGCTTCTCCAAATTCTGACTaGGAGTGCCACTGCAAGACCACACACATCTGGAAAAACGGTCTA | + |
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Preference number: 6 (lower is better) Translates to: KSVKGQERHASPNSD*ECHCKTTHIWKNGL Trigger: TAGACCGTTTTTCCAGATGTGTGTGGTCTTGCAGTGGCACTCCAAGTCAGAATTTGGAGAAGCATGTCTCTCCTGGCCCTTGACTGACTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000567982.5 |
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| CDS GCA 72 bp | CAGGAGAGACATGCTTCTCCAAATTCTGACTTGGAGTaGCACTGCAAGACCACACACATCTGGAAAAACGGT | + |
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Preference number: 6 (lower is better) Translates to: QERHASPNSDLE*HCKTTHIWKNG Trigger: ACCGTTTTTCCAGATGTGTGTGGTCTTGCAGTGGCACTCCAAGTCAGAATTTGGAGAAGCATGTCTCTCCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000567982.5 |
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| CDS CCA 72 bp | ACTGCAGATTGCTGGGCTGATTCCACAGCATTAGAGTaGGGCCCAGGTACTTGCATTTTAATAAGACCCACA | + |
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Preference number: 6 (lower is better) Translates to: TADCWADSTALE*GPGTCILIRPT Trigger: TGTGGGTCTTATTAAAATGCAAGTACCTGGGCCCCACTCTAATGCTGTGGAATCAGCCCAGCAATCTGCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563589.1 |
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| CDS GCA 72 bp | AGACATGCTTCTCCAAATTCTGACTTGGAGTGCCACTaGAAGACCACACACATCTGGAAAAACGGTCTAAAG | + |
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Preference number: 6 (lower is better) Translates to: RHASPNSDLECH*KTTHIWKNGLK Trigger: CTTTAGACCGTTTTTCCAGATGTGTGTGGTCTTGCAGTGGCACTCCAAGTCAGAATTTGGAGAAGCATGTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000567982.5 |
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