Pregenerated sensors for POLR2B (Homo sapiens)
Ensembl gene IDs: ENSG00000047315Ensembl transcript IDs: ENST00000314595.6, ENST00000381227.5, ENST00000431623.6, ENST00000433463.1, ENST00000441246.6, ENST00000450656.5, ENST00000464918.1, ENST00000478188.5, ENST00000484821.1, ENST00000495311.1, ENST00000497845.1, ENST00000510355.1
Found 74 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CGGAATGGGCGGTCCGCCTCCTCGCAGGAGCTGAGATCGCGCCACTaGACTCCAGCCCTCATCCGCGTCGTACATATTGCCAAACGGTTC | + |
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Preference number: 5 (lower is better) Translates to: RNGRSASSQELRSRH*TPALIRVVHIAKRF Trigger: GAACCGTTTGGCAATATGTACGACGCGGATGAGGGCTGGAGTGCAGTGGCGCGATCTCAGCTCCTGCGAGGAGGCGGACCGCCCATTCCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441246.6 |
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| CDS GCA 90 bp | TGGGCCGCCGCTGCCGGGCTGATTGAGAGGACAGCTCCCGCAATCTaGGGTCGTATCCGTTCCGTCAATGTTTTATTTCTGCTTGTTTTT | + |
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Preference number: 5 (lower is better) Translates to: WAAAAGLIERTAPAI*GRIRSVNVLFLLVF Trigger: AAAAACAAGCAGAAATAAAACATTGACGGAACGGATACGACCGCAGATTGCGGGAGCTGTCCTCTCAATCAGCCCGGCAGCGGCGGCCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000381227.5 ENST00000450656.5 ENST00000495311.1 |
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| CDS TCA 90 bp | TCCGCGTCGTACATATTGCCAAACGGTTCTCGAGCTCCTAACTCTTaGAATCAAAAGACAAAAACCGCCCAGAAGCCAGCAGCGCCAGGA | + |
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Preference number: 5 (lower is better) Translates to: SASYILPNGSRAPNS*NQKTKTAQKPAAPG Trigger: TCCTGGCGCTGCTGGCTTCTGGGCGGTTTTTGTCTTTTGATTTCAAGAGTTAGGAGCTCGAGAACCGTTTGGCAATATGTACGACGCGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENST00000314595.6 ENST00000381227.5 ENST00000431623.6 ENST00000433463.1 ENST00000441246.6 ENST00000450656.5 ENST00000497845.1 |
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| CDS GCA 90 bp | GAGATCGCGCCACTGCACTCCAGCCCTCATCCGCGTCGTACATATTaGCAAACGGTTCTCGAGCTCCTAACTCTTGAAATCAAAAGACAA | + |
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Preference number: 5 (lower is better) Translates to: EIAPLHSSPHPRRTY*QTVLELLTLEIKRQ Trigger: TTGTCTTTTGATTTCAAGAGTTAGGAGCTCGAGAACCGTTTGGCAATATGTACGACGCGGATGAGGGCTGGAGTGCAGTGGCGCGATCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441246.6 |
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| CDS TCA 90 bp | ATGGGAACTTCTTGCTTGATATATGGTAGAGTTGCCACAATGCGCTaGCCAATAGCACTCTTCTTGGCACCCTGTCCTCCTCTTGCCAGC | + |
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Preference number: 5 (lower is better) Translates to: MGTSCLIYGRVATMR*PIALFLAPCPPLAS Trigger: GCTGGCAAGAGGAGGACAGGGTGCCAAGAAGAGTGCTATTGGTCAGCGCATTGTGGCAACTCTACCATATATCAAGCAAGAAGTTCCCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000314595.6 ENST00000381227.5 ENST00000431623.6 ENST00000441246.6 |
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| CDS TCA 90 bp | GCTAGCTTGCCGTCTCTACCAATAGGAGAATTTAAACGACGCAGGTaGGAAAGAGTAGACGCAAAAGTCAGGCGGTTTAACACCTGCCAC | + |
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Preference number: 5 (lower is better) Translates to: ASLPSLPIGEFKRRR*ERVDAKVRRFNTCH Trigger: GTGGCAGGTGTTAAACCGCCTGACTTTTGCGTCTACTCTTTCTCACCTGCGTCGTTTAAATTCTCCTATTGGTAGAGACGGCAAGCTAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000510355.1 |
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| CDS TCA 90 bp | TTCAGCAAATATCGTGGCGGTTCTTCAACTTCTCCACTAGCATGCTaGGCTTCAGCCTGTAGGTCTATAGGAGGAGCGTCTTCCACAATT | + |
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Preference number: 5 (lower is better) Translates to: FSKYRGGSSTSPLAC*ASACRSIGGASSTI Trigger: AATTGTGGAAGACGCTCCTCCTATAGACCTACAGGCTGAAGCTCAGCATGCTAGTGGAGAAGTTGAAGAACCGCCACGATATTTGCTGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000314595.6 ENST00000381227.5 ENST00000441246.6 |
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| CDS GCA 90 bp | TCTTGCCACAAATCCGGGGTGATTTCATCATCATCCTCATCATATTaGATATCCTCATCCGCGTCGTACATATTGCCAAACGGTTCTCGA | + |
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Preference number: 5 (lower is better) Translates to: SCHKSGVISSSSSSY*ISSSASYILPNGSR Trigger: TCGAGAACCGTTTGGCAATATGTACGACGCGGATGAGGATATGCAATATGATGAGGATGATGATGAAATCACCCCGGATTTGTGGCAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000314595.6 ENST00000381227.5 ENST00000431623.6 ENST00000450656.5 ENST00000497845.1 |
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| CDS CCA 90 bp | TCTGGGTTTTATTGCGGCAGCCCCTGCATTCATATGTATGGGTCCTaGTGTTGGCAATCGCCATTATTCCACAAAGATTGCAAACATGAA | + |
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Preference number: 5 (lower is better) Translates to: SGFYCGSPCIHMYGS*CWQSPLFHKDCKHE Trigger: TTCATGTTTGCAATCTTTGTGGAATAATGGCGATTGCCAACACCAGGACCCATACATATGAATGCAGGGGCTGCCGCAATAAAACCCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000314595.6 ENST00000381227.5 ENST00000431623.6 ENST00000441246.6 ENST00000478188.5 |
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| CDS CCA 90 bp | TTTTATTGCGGCAGCCCCTGCATTCATATGTATGGGTCCTGGTGTTaGCAATCGCCATTATTCCACAAAGATTGCAAACATGAACCTGAT | + |
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Preference number: 5 (lower is better) Translates to: FYCGSPCIHMYGSWC*QSPLFHKDCKHEPD Trigger: ATCAGGTTCATGTTTGCAATCTTTGTGGAATAATGGCGATTGCCAACACCAGGACCCATACATATGAATGCAGGGGCTGCCGCAATAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000314595.6 ENST00000381227.5 ENST00000431623.6 ENST00000441246.6 ENST00000478188.5 |
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| CDS CCA 90 bp | AAAGAAATCTGGGTTTTATTGCGGCAGCCCCTGCATTCATATGTATaGGTCCTGGTGTTGGCAATCGCCATTATTCCACAAAGATTGCAA | + |
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Preference number: 5 (lower is better) Translates to: KEIWVLLRQPLHSYV*VLVLAIAIIPQRLQ Trigger: TTGCAATCTTTGTGGAATAATGGCGATTGCCAACACCAGGACCCATACATATGAATGCAGGGGCTGCCGCAATAAAACCCAGATTTCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000314595.6 ENST00000381227.5 ENST00000431623.6 ENST00000441246.6 ENST00000478188.5 |
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| CDS TCA 90 bp | GCTAACCCATATAGTACTGGTGGGTCGGGAAGAATTCTCAAGACATaGTCTACACTCTCCTGTGTAGGCATATTTAGAATCCTTTTTGGC | + |
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Preference number: 5 (lower is better) Translates to: ANPYSTGGSGRILKT*STLSCVGIFRILFG Trigger: GCCAAAAAGGATTCTAAATATGCCTACACAGGAGAGTGTAGATCATGTCTTGAGAATTCTTCCCGACCCACCAGTACTATATGGGTTAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000314595.6 ENST00000381227.5 ENST00000431623.6 ENST00000441246.6 |
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| CDS TCA 90 bp | AAGCCGCGGTCTACAGCTGAACGATTCATGATAACAGAGTCTTCCTaGTTATATCCAGTGTATGATGCAATGGCCACAATTGAGTTGATG | + |
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Preference number: 5 (lower is better) Translates to: KPRSTAERFMITESS*LYPVYDAMATIELM Trigger: CATCAACTCAATTGTGGCCATTGCATCATACACTGGATATAATCAGGAAGACTCTGTTATCATGAATCGTTCAGCTGTAGACCGCGGCTT 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000314595.6 ENST00000381227.5 ENST00000431623.6 ENST00000441246.6 ENST00000478188.5 |
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| CDS TCA 90 bp | AACCATCATCATCCAGCTTGTCGTAAATGGCATGCCTCATGCCTGTaGGGAAATAGACACGGAATGTCACATAATCCCCAACAAAGATTA | + |
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Preference number: 5 (lower is better) Translates to: NHHHPACRKWHASCL*GNRHGMSHNPQQRL Trigger: TAATCTTTGTTGGGGATTATGTGACATTCCGTGTCTATTTCCTCACAGGCATGAGGCATGCCATTTACGACAAGCTGGATGATGATGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000464918.1 |
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| CDS GCA 90 bp | CATCATCCTCATCATATTGCATATCCTCATCCGCGTCGTACATATTaGCAAACGGTTCTCGAGCTCCTAACTCTTGAAATCAAAAGACAA | + |
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Preference number: 5 (lower is better) Translates to: HHPHHIAYPHPRRTY*QTVLELLTLEIKRQ Trigger: TTGTCTTTTGATTTCAAGAGTTAGGAGCTCGAGAACCGTTTGGCAATATGTACGACGCGGATGAGGATATGCAATATGATGAGGATGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000314595.6 ENST00000381227.5 ENST00000431623.6 ENST00000450656.5 ENST00000497845.1 |
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| CDS GCA 90 bp | TTCAGTTTGGTCCAAAGTTACCTGATTACAATCCAGCATGCTTCTTaGCACAAATCCGGGGTGATTTCATCATCATCCTCATCATATTGC | + |
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Preference number: 5 (lower is better) Translates to: FSLVQSYLITIQHAS*HKSGVISSSSSSYC Trigger: GCAATATGATGAGGATGATGATGAAATCACCCCGGATTTGTGGCAAGAAGCATGCTGGATTGTAATCAGGTAACTTTGGACCAAACTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000497845.1 |
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| CDS CCA 90 bp | CTAAGTCTTCTGTCGTGGATAAGCAGCATCACCTTTCTCTCAATCTaGAAATCTCAAAATCATTTTTGTCTCCAAGTTCCTCCTTCTACC | + |
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Preference number: 5 (lower is better) Translates to: LSLLSWISSITFLSI*KSQNHFCLQVPPST Trigger: GGTAGAAGGAGGAACTTGGAGACAAAAATGATTTTGAGATTTCCAGATTGAGAGAAAGGTGATGCTGCTTATCCACGACAGAAGACTTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000478188.5 |
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| CDS TCA 90 bp | CGAATATCTCTGATCATAGAAACTTCAGACACAATGATGTCCATCTaGCGTCTCAATTTCCTTAGGGTGTTCATAAGTTGTTCGGGATCT | + |
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Preference number: 5 (lower is better) Translates to: RISLIIETSDTMMSI*RLNFLRVFISCSGS Trigger: AGATCCCGAACAACTTATGAACACCCTAAGGAAATTGAGACGTCAGATGGACATCATTGTGTCTGAAGTTTCTATGATCAGAGATATTCG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000314595.6 ENST00000381227.5 ENST00000431623.6 ENST00000441246.6 ENST00000478188.5 ENST00000510355.1 |
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| CDS TCA 90 bp | CAAACTGTTCCCCATTTCTCTATTCTTTCCCTGAATAATGTTGTTTaGCACTTTAACTTACCTGCCACTTGCAGCAGGGATGGCAAATAT | + |
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Preference number: 5 (lower is better) Translates to: QTVPHFSILSLNNVV*HFNLPATCSRDGKY Trigger: ATATTTGCCATCCCTGCTGCAAGTGGCAGGTAAGTTAAAGTGTCAAACAACATTATTCAGGGAAAGAATAGAGAAATGGGGAACAGTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000478188.5 |
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| CDS CCA 90 bp | AGACACCAAGGATCATTGAGGGATGAATCTCACAGTGTGTATATGTaGAACAATAAGCTACTTCTTTCTCCTGTAAATCATCTGGAGTCA | + |
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Preference number: 5 (lower is better) Translates to: RHQGSLRDESHSVYM*NNKLLLSPVNHLES Trigger: TGACTCCAGATGATTTACAGGAGAAAGAAGTAGCTTATTGTTCCACATATACACACTGTGAGATTCATCCCTCAATGATCCTTGGTGTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000314595.6 ENST00000381227.5 ENST00000431623.6 ENST00000441246.6 ENST00000478188.5 |
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| CDS TCA 90 bp | AATCTACTGAGTATCAAACTGTTCCCCATTTCTCTATTCTTTCCCTaGATAATGTTGTTTGACACTTTAACTTACCTGCCACTTGCAGCA | + |
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Preference number: 5 (lower is better) Translates to: NLLSIKLFPISLFFP*IMLFDTLTYLPLAA Trigger: TGCTGCAAGTGGCAGGTAAGTTAAAGTGTCAAACAACATTATTCAGGGAAAGAATAGAGAAATGGGGAACAGTTTGATACTCAGTAGATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000478188.5 |
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| CDS CCA 90 bp | TTTGCTCCTCTTGAACCAATGAAATTTAGTGCAACATTCTGTTCTTaGATGACAAAAGCTTCATCGAGAGAAGGTTTAACCATTTCCATC | + |
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Preference number: 5 (lower is better) Translates to: FAPLEPMKFSATFCS*MTKASSREGLTISI Trigger: GATGGAAATGGTTAAACCTTCTCTCGATGAAGCTTTTGTCATCCAAGAACAGAATGTTGCACTAAATTTCATTGGTTCAAGAGGAGCAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000314595.6 ENST00000381227.5 ENST00000431623.6 ENST00000441246.6 |
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| CDS TCA 90 bp | TTTTCCATACTCCATTCTTCTAAAAATTCCAGAATTGGAGATGGTTaGGATCCAACTGAAATATACGCCATCAAGGCTAAATTCTTCACA | + |
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Preference number: 5 (lower is better) Translates to: FSILHSSKNSRIGDG*DPTEIYAIKAKFFT Trigger: TGTGAAGAATTTAGCCTTGATGGCGTATATTTCAGTTGGATCTCAACCATCTCCAATTCTGGAATTTTTAGAAGAATGGAGTATGGAAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000314595.6 ENST00000381227.5 ENST00000431623.6 ENST00000441246.6 ENST00000478188.5 ENST00000510355.1 |
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| CDS GCA 90 bp | TGCCAACTCCAAGTTAAAATCCTTTCCTCGATCAATAAATTTCTGTaGATAGATCCGCACTTCTTTAAGCAAATTCTTAAACATACCTCT | + |
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Preference number: 5 (lower is better) Translates to: CQLQVKILSSINKFL*IDPHFFKQILKHTS Trigger: AGAGGTATGTTTAAGAATTTGCTTAAAGAAGTGCGGATCTATGCACAGAAATTTATTGATCGAGGAAAGGATTTTAACTTGGAGTTGGCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000314595.6 ENST00000381227.5 ENST00000431623.6 ENST00000441246.6 |
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| CDS GCA 72 bp | CGGTCCGCCTCCTCGCAGGAGCTGAGATCGCGCCACTaGACTCCAGCCCTCATCCGCGTCGTACATATTGCC | + |
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Preference number: 6 (lower is better) Translates to: RSASSQELRSRH*TPALIRVVHIA Trigger: GGCAATATGTACGACGCGGATGAGGGCTGGAGTGCAGTGGCGCGATCTCAGCTCCTGCGAGGAGGCGGACCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441246.6 |
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| CDS CCA 72 bp | CTTGGGCCGGGGTTAGGGTTGCACACGCGTAAATTGTaGGCCGCCGCTGCCGGGCTGATTGAGAGGACAGCT | + |
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Preference number: 6 (lower is better) Translates to: LGPGLGLHTRKL*AAAAGLIERTA Trigger: AGCTGTCCTCTCAATCAGCCCGGCAGCGGCGGCCCACAATTTACGCGTGTGCAACCCTAACCCCGGCCCAAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000381227.5 ENST00000450656.5 ENST00000495311.1 |
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| CDS TCA 72 bp | TGCACACGCGTAAATTGTGGGCCGCCGCTGCCGGGCTaGTTGAGAGGACAGCTCCCGCAATCTGCGGTCGTA | + |
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Preference number: 6 (lower is better) Translates to: CTRVNCGPPLPG*LRGQLPQSAVV Trigger: TACGACCGCAGATTGCGGGAGCTGTCCTCTCAATCAGCCCGGCAGCGGCGGCCCACAATTTACGCGTGTGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000381227.5 ENST00000450656.5 ENST00000495311.1 |
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| CDS CAA 72 bp | AAGCTTGGGCCGGGGTTAGGGTTGCACACGCGTAAATaGTGGGCCGCCGCTGCCGGGCTGATTGAGAGGACA | + |
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Preference number: 6 (lower is better) Translates to: KLGPGLGLHTRK*WAAAAGLIERT Trigger: TGTCCTCTCAATCAGCCCGGCAGCGGCGGCCCACAATTTACGCGTGTGCAACCCTAACCCCGGCCCAAGCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000381227.5 ENST00000450656.5 ENST00000495311.1 |
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| CDS GCA 72 bp | CCAAAGGCCGCCCACAGGGACGCCAAAGTTAGGATCTaGGCCTGCGCAAATTGTAGGTCAAGCTTGGGCCGG | + |
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Preference number: 6 (lower is better) Translates to: PKAAHRDAKVRI*ACANCRSSLGR Trigger: CCGGCCCAAGCTTGACCTACAATTTGCGCAGGCGCAGATCCTAACTTTGGCGTCCCTGTGGGCGGCCTTTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000381227.5 ENST00000450656.5 ENST00000495311.1 |
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| CDS GCA 72 bp | GCTGCCGGGCTGATTGAGAGGACAGCTCCCGCAATCTaGGGTCGTATCCGTTCCGTCAATGTTTTATTTCTG | + |
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Preference number: 6 (lower is better) Translates to: AAGLIERTAPAI*GRIRSVNVLFL Trigger: CAGAAATAAAACATTGACGGAACGGATACGACCGCAGATTGCGGGAGCTGTCCTCTCAATCAGCCCGGCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000381227.5 ENST00000450656.5 ENST00000495311.1 |
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| CDS GCA 72 bp | CCACTGCACTCCAGCCCTCATCCGCGTCGTACATATTaGCAAACGGTTCTCGAGCTCCTAACTCTTGAAATC | + |
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Preference number: 6 (lower is better) Translates to: PLHSSPHPRRTY*QTVLELLTLEI Trigger: GATTTCAAGAGTTAGGAGCTCGAGAACCGTTTGGCAATATGTACGACGCGGATGAGGGCTGGAGTGCAGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441246.6 |
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| CDS TCA 72 bp | TATCGTGGCGGTTCTTCAACTTCTCCACTAGCATGCTaGGCTTCAGCCTGTAGGTCTATAGGAGGAGCGTCT | + |
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Preference number: 6 (lower is better) Translates to: YRGGSSTSPLAC*ASACRSIGGAS Trigger: AGACGCTCCTCCTATAGACCTACAGGCTGAAGCTCAGCATGCTAGTGGAGAAGTTGAAGAACCGCCACGATA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000314595.6 ENST00000381227.5 ENST00000441246.6 |
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| CDS GCA 72 bp | CCACAGAGCGAGACTCCTCATCCGCGTCGTACATATTaGCAAACGGTTCTCGAGCTCCTAACTCTTGAAATC | + |
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Preference number: 6 (lower is better) Translates to: PQSETPHPRRTY*QTVLELLTLEI Trigger: GATTTCAAGAGTTAGGAGCTCGAGAACCGTTTGGCAATATGTACGACGCGGATGAGGAGTCTCGCTCTGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433463.1 |
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| CDS GCA 72 bp | GTCTCGGCAGGACACACCATTCCCCACAACGTATTATaGAACTGTCTTGGTTTTGCTAGCTTGCCGTCTCTA | + |
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Preference number: 6 (lower is better) Translates to: VSAGHTIPHNVL*NCLGFASLPSL Trigger: TAGAGACGGCAAGCTAGCAAAACCAAGACAGTTGCATAATACGTTGTGGGGAATGGTGTGTCCTGCCGAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000314595.6 ENST00000381227.5 ENST00000431623.6 ENST00000441246.6 ENST00000478188.5 ENST00000510355.1 |
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| CDS TCA 72 bp | TCTTGCTTGATATATGGTAGAGTTGCCACAATGCGCTaGCCAATAGCACTCTTCTTGGCACCCTGTCCTCCT | + |
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Preference number: 6 (lower is better) Translates to: SCLIYGRVATMR*PIALFLAPCPP Trigger: AGGAGGACAGGGTGCCAAGAAGAGTGCTATTGGTCAGCGCATTGTGGCAACTCTACCATATATCAAGCAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000314595.6 ENST00000381227.5 ENST00000431623.6 ENST00000441246.6 |
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| CDS TCA 72 bp | CTTTCCCTTAAAAACTGGGCTGCTCCATGGGCAATCTaGCAATCTCGTTCCATTTCTCCAAAACGCAGGCCA | + |
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Preference number: 6 (lower is better) Translates to: LSLKNWAAPWAI*QSRSISPKRRP Trigger: TGGCCTGCGTTTTGGAGAAATGGAACGAGATTGTCAGATTGCCCATGGAGCAGCCCAGTTTTTAAGGGAAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000314595.6 ENST00000381227.5 ENST00000431623.6 ENST00000441246.6 ENST00000478188.5 |
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| CDS TCA 72 bp | TATCTTACCGGTTCTTCAACTTCTCCACTAGCATGCTaGGCTTCAGCCTGTAGGTCTATAGGAGGAGCGTCT | + |
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Preference number: 6 (lower is better) Translates to: YLTGSSTSPLAC*ASACRSIGGAS Trigger: AGACGCTCCTCCTATAGACCTACAGGCTGAAGCTCAGCATGCTAGTGGAGAAGTTGAAGAACCGGTAAGATA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433463.1 |
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| CDS CCA 72 bp | TATTGCGGCAGCCCCTGCATTCATATGTATGGGTCCTaGTGTTGGCAATCGCCATTATTCCACAAAGATTGC | + |
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Preference number: 6 (lower is better) Translates to: YCGSPCIHMYGS*CWQSPLFHKDC Trigger: GCAATCTTTGTGGAATAATGGCGATTGCCAACACCAGGACCCATACATATGAATGCAGGGGCTGCCGCAATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000314595.6 ENST00000381227.5 ENST00000431623.6 ENST00000441246.6 ENST00000478188.5 |
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| CDS CCA 72 bp | TGGGTTTTATTGCGGCAGCCCCTGCATTCATATGTATaGGTCCTGGTGTTGGCAATCGCCATTATTCCACAA | + |
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Preference number: 6 (lower is better) Translates to: WVLLRQPLHSYV*VLVLAIAIIPQ Trigger: TTGTGGAATAATGGCGATTGCCAACACCAGGACCCATACATATGAATGCAGGGGCTGCCGCAATAAAACCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000314595.6 ENST00000381227.5 ENST00000431623.6 ENST00000441246.6 ENST00000478188.5 |
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| CDS CAA 72 bp | CGGCAGCCCCTGCATTCATATGTATGGGTCCTGGTGTaGGCAATCGCCATTATTCCACAAAGATTGCAAACA | + |
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Preference number: 6 (lower is better) Translates to: RQPLHSYVWVLV*AIAIIPQRLQT Trigger: TGTTTGCAATCTTTGTGGAATAATGGCGATTGCCAACACCAGGACCCATACATATGAATGCAGGGGCTGCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000314595.6 ENST00000381227.5 ENST00000431623.6 ENST00000441246.6 ENST00000478188.5 |
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| CDS TCA 72 bp | CATCCAGCTTGTCGTAAATGGCATGCCTCATGCCTGTaGGGAAATAGACACGGAATGTCACATAATCCCCAA | + |
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Preference number: 6 (lower is better) Translates to: HPACRKWHASCL*GNRHGMSHNPQ Trigger: TTGGGGATTATGTGACATTCCGTGTCTATTTCCTCACAGGCATGAGGCATGCCATTTACGACAAGCTGGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000464918.1 |
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| CDS CCA 72 bp | AAGTCAGGCGGTTTAACACCTGAGATACTCCAGCTCTaGCTTGATGAGCTTTCTTTTGATCACCCCAGTTTC | + |
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Preference number: 6 (lower is better) Translates to: KSGGLTPEILQL*LDELSFDHPSF Trigger: GAAACTGGGGTGATCAAAAGAAAGCTCATCAAGCCAGAGCTGGAGTATCTCAGGTGTTAAACCGCCTGACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000314595.6 ENST00000381227.5 ENST00000431623.6 ENST00000441246.6 |
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| CDS CCA 72 bp | GGCAGCCCCTGCATTCATATGTATGGGTCCTGGTGTTaGCAATCGCCATTATTCCACAAAGATTGCAAACAT | + |
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Preference number: 6 (lower is better) Translates to: GSPCIHMYGSWC*QSPLFHKDCKH Trigger: ATGTTTGCAATCTTTGTGGAATAATGGCGATTGCCAACACCAGGACCCATACATATGAATGCAGGGGCTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000314595.6 ENST00000381227.5 ENST00000431623.6 ENST00000441246.6 ENST00000478188.5 |
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| CDS TCA 72 bp | CCGTCTCTACCAATAGGAGAATTTAAACGACGCAGGTaGGAAAGAGTAGACGCAAAAGTCAGGCGGTTTAAC | + |
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Preference number: 6 (lower is better) Translates to: PSLPIGEFKRRR*ERVDAKVRRFN Trigger: GTTAAACCGCCTGACTTTTGCGTCTACTCTTTCTCACCTGCGTCGTTTAAATTCTCCTATTGGTAGAGACGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000314595.6 ENST00000381227.5 ENST00000431623.6 ENST00000441246.6 ENST00000478188.5 ENST00000510355.1 |
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| CDS CAA 72 bp | GGAGCAGAATACGTGAGATTCCTTAATCTAGCTTCATaGGGCATCATTGGTGAAGGAGCACCATCTCTTTCC | + |
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Preference number: 6 (lower is better) Translates to: GAEYVRFLNLAS*GIIGEGAPSLS Trigger: GGAAAGAGATGGTGCTCCTTCACCAATGATGCCCAATGAAGCTAGATTAAGGAATCTCACGTATTCTGCTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000314595.6 ENST00000381227.5 ENST00000431623.6 ENST00000441246.6 |
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| CDS CAA 72 bp | GCAAATATCGTGGCTGATTACAATCCAGCATGCTTCTaGCCACAAATCCGGGGTGATTTCATCATCATCCTC | + |
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Preference number: 6 (lower is better) Translates to: ANIVADYNPACF*PQIRGDFIIIL Trigger: GAGGATGATGATGAAATCACCCCGGATTTGTGGCAAGAAGCATGCTGGATTGTAATCAGCCACGATATTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000431623.6 |
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| CDS CAA 72 bp | GGTCCAAAGTTACCTGATTACAATCCAGCATGCTTCTaGCCACAAATCCGGGGTGATTTCATCATCATCCTC | + |
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Preference number: 6 (lower is better) Translates to: GPKLPDYNPACF*PQIRGDFIIIL Trigger: GAGGATGATGATGAAATCACCCCGGATTTGTGGCAAGAAGCATGCTGGATTGTAATCAGGTAACTTTGGACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000497845.1 |
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| CDS TCA 72 bp | TACATATTGCCAAACGGTTCTCGAGCTCCTAACTCTTaGAATCAAAAGACAAAAACCGCCCAGAAGCCAGCA | + |
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Preference number: 6 (lower is better) Translates to: YILPNGSRAPNS*NQKTKTAQKPA Trigger: TGCTGGCTTCTGGGCGGTTTTTGTCTTTTGATTTCAAGAGTTAGGAGCTCGAGAACCGTTTGGCAATATGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENST00000314595.6 ENST00000381227.5 ENST00000431623.6 ENST00000433463.1 ENST00000441246.6 ENST00000450656.5 ENST00000497845.1 |
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| CDS GCA 72 bp | CATCATATTGCATATCCTCATCCGCGTCGTACATATTaGCAAACGGTTCTCGAGCTCCTAACTCTTGAAATC | + |
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Preference number: 6 (lower is better) Translates to: HHIAYPHPRRTY*QTVLELLTLEI Trigger: GATTTCAAGAGTTAGGAGCTCGAGAACCGTTTGGCAATATGTACGACGCGGATGAGGATATGCAATATGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000314595.6 ENST00000381227.5 ENST00000431623.6 ENST00000450656.5 ENST00000497845.1 |
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| CDS GCA 72 bp | CAAATATCGTGGCTGATTACAATCCAGCATGCTTCTTaGCACAAATCCGGGGTGATTTCATCATCATCCTCA | + |
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Preference number: 6 (lower is better) Translates to: QISWLITIQHAS*HKSGVISSSSS Trigger: TGAGGATGATGATGAAATCACCCCGGATTTGTGGCAAGAAGCATGCTGGATTGTAATCAGCCACGATATTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000431623.6 |
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| CDS GCA 72 bp | GTCCAAAGTTACCTGATTACAATCCAGCATGCTTCTTaGCACAAATCCGGGGTGATTTCATCATCATCCTCA | + |
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Preference number: 6 (lower is better) Translates to: VQSYLITIQHAS*HKSGVISSSSS Trigger: TGAGGATGATGATGAAATCACCCCGGATTTGTGGCAAGAAGCATGCTGGATTGTAATCAGGTAACTTTGGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000497845.1 |
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| CDS GCA 72 bp | CAGTTTGGTCCAAAGTTACCTGATTACAATCCAGCATaGTTCTTGCCACAAATCCGGGGTGATTTCATCATC | + |
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Preference number: 6 (lower is better) Translates to: QFGPKLPDYNPA*FLPQIRGDFII Trigger: GATGATGAAATCACCCCGGATTTGTGGCAAGAAGCATGCTGGATTGTAATCAGGTAACTTTGGACCAAACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000497845.1 |
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| CDS CAA 90 bp | AGGAGCACCATCTCTTTCCCAATGGGTAGGCTTGGAAAGATAAATTaGTTCAAACTTCAGCAAATATCGTGGCGGTTCTTCAACTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: RSTISFPMGRLGKIN*FKLQQISWRFFNFS Trigger: GGAGAAGTTGAAGAACCGCCACGATATTTGCTGAAGTTTGAACAAATTTATCTTTCCAAGCCTACCCATTGGGAAAGAGATGGTGCTCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000314595.6 ENST00000381227.5 ENST00000441246.6 |
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| CDS CAA 90 bp | TTGGTGCTCTCCAATTCATCTTCATTTTCAGGCAAGGTGACTGTTTaGCCTATAATAACATCATCTCCTGATACACGAACCCCTGGAGCT | + |
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Preference number: 6 (lower is better) Translates to: LVLSNSSSFSGKVTV*PIITSSPDTRTPGA Trigger: AGCTCCAGGGGTTCGTGTATCAGGAGATGATGTTATTATAGGCAAAACAGTCACCTTGCCTGAAAATGAAGATGAATTGGAGAGCACCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000314595.6 ENST00000381227.5 ENST00000431623.6 ENST00000441246.6 ENST00000464918.1 ENST00000478188.5 |
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| CDS TCA 72 bp | CAAGGTGACTGTTTTGCCTATAATAACATCATCTCCTaGTACACGAACCCCTGGAGCTATCAAACCATCATC | + |
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Preference number: 6 (lower is better) Translates to: QGDCFAYNNIIS*YTNPWSYQTII Trigger: GATGATGGTTTGATAGCTCCAGGGGTTCGTGTATCAGGAGATGATGTTATTATAGGCAAAACAGTCACCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000314595.6 ENST00000381227.5 ENST00000431623.6 ENST00000441246.6 ENST00000464918.1 ENST00000478188.5 |
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| CDS GCA 72 bp | AAATCCGGGGTGATTTCATCATCATCCTCATCATATTaGATATCCTCATCCGCGTCGTACATATTGCCAAAC | + |
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Preference number: 6 (lower is better) Translates to: KSGVISSSSSSY*ISSSASYILPN Trigger: GTTTGGCAATATGTACGACGCGGATGAGGATATGCAATATGATGAGGATGATGATGAAATCACCCCGGATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000314595.6 ENST00000381227.5 ENST00000431623.6 ENST00000450656.5 ENST00000497845.1 |
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| CDS CCA 72 bp | CTTCTTCCAGGGTATCAATATACTCCACTACCCCACTaGCCACAAGATCCTGCCAACTATAGTTGTTATATT | + |
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Preference number: 6 (lower is better) Translates to: LLPGYQYTPLPH*PQDPANYSCYI Trigger: AATATAACAACTATAGTTGGCAGGATCTTGTGGCCAGTGGGGTAGTGGAGTATATTGATACCCTGGAAGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000314595.6 ENST00000381227.5 ENST00000431623.6 ENST00000441246.6 ENST00000478188.5 |
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| CDS CAA 72 bp | CAAATCCGGGGTGATTTCATCATCATCCTCATCATATaGCATATCCTCATCCGCGTCGTACATATTGCCAAA | + |
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Preference number: 6 (lower is better) Translates to: QIRGDFIIILII*HILIRVVHIAK Trigger: TTTGGCAATATGTACGACGCGGATGAGGATATGCAATATGATGAGGATGATGATGAAATCACCCCGGATTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000314595.6 ENST00000381227.5 ENST00000431623.6 ENST00000450656.5 ENST00000497845.1 |
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| CDS CAA 72 bp | GTCAAAATAGGAACTGATTACAATCCAGCATGCTTCTaGCCACAAATCCGGGGTGATTTCATCATCATCCTC | + |
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Preference number: 6 (lower is better) Translates to: VKIGTDYNPACF*PQIRGDFIIIL Trigger: GAGGATGATGATGAAATCACCCCGGATTTGTGGCAAGAAGCATGCTGGATTGTAATCAGTTCCTATTTTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000314595.6 ENST00000381227.5 ENST00000433463.1 ENST00000441246.6 ENST00000450656.5 |
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| CDS CAA 72 bp | CACAACGTATTATGCAACTGTCTTGGTTTTGCTAGCTaGCCGTCTCTACCAATAGGAGAATTTAAACGACGC | + |
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Preference number: 6 (lower is better) Translates to: HNVLCNCLGFAS*PSLPIGEFKRR Trigger: GCGTCGTTTAAATTCTCCTATTGGTAGAGACGGCAAGCTAGCAAAACCAAGACAGTTGCATAATACGTTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000314595.6 ENST00000381227.5 ENST00000431623.6 ENST00000441246.6 ENST00000478188.5 ENST00000510355.1 |
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| CDS TCA 72 bp | TATAGTACTGGTGGGTCGGGAAGAATTCTCAAGACATaGTCTACACTCTCCTGTGTAGGCATATTTAGAATC | + |
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Preference number: 6 (lower is better) Translates to: YSTGGSGRILKT*STLSCVGIFRI Trigger: GATTCTAAATATGCCTACACAGGAGAGTGTAGATCATGTCTTGAGAATTCTTCCCGACCCACCAGTACTATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000314595.6 ENST00000381227.5 ENST00000431623.6 ENST00000441246.6 |
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| CDS TCA 72 bp | ATAGAAAACAGACCTGAAGAAGCCGCGGTCTACAGCTaGACGATTCATGATAACAGAGTCTTCCTGATTATA | + |
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Preference number: 6 (lower is better) Translates to: IENRPEEAAVYS*TIHDNRVFLII Trigger: TATAATCAGGAAGACTCTGTTATCATGAATCGTTCAGCTGTAGACCGCGGCTTCTTCAGGTCTGTTTTCTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000314595.6 ENST00000381227.5 ENST00000431623.6 ENST00000441246.6 ENST00000478188.5 |
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| CDS TCA 72 bp | CCCCATTTCTCTATTCTTTCCCTGAATAATGTTGTTTaGCACTTTAACTTACCTGCCACTTGCAGCAGGGAT | + |
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Preference number: 6 (lower is better) Translates to: PHFSILSLNNVV*HFNLPATCSRD Trigger: ATCCCTGCTGCAAGTGGCAGGTAAGTTAAAGTGTCAAACAACATTATTCAGGGAAAGAATAGAGAAATGGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000478188.5 |
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| CDS GCA 72 bp | TTTCTCGTCAAAATAGGAACTGATTACAATCCAGCATaGTTCTTGCCACAAATCCGGGGTGATTTCATCATC | + |
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Preference number: 6 (lower is better) Translates to: FLVKIGTDYNPA*FLPQIRGDFII Trigger: GATGATGAAATCACCCCGGATTTGTGGCAAGAAGCATGCTGGATTGTAATCAGTTCCTATTTTGACGAGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000314595.6 ENST00000381227.5 ENST00000433463.1 ENST00000441246.6 ENST00000450656.5 |
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| CDS CAA 90 bp | AGGAGCACCATCTCTTTCCCAATGGGTAGGCTTGGAAAGATAAATTaGTTCAAACTTCAGCAAATATCGTGGCTGATTACAATCCAGCAT | + |
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Preference number: 6 (lower is better) Translates to: RSTISFPMGRLGKIN*FKLQQISWLITIQH Trigger: ATGCTGGATTGTAATCAGCCACGATATTTGCTGAAGTTTGAACAAATTTATCTTTCCAAGCCTACCCATTGGGAAAGAGATGGTGCTCCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000431623.6 |
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| CDS CAA 90 bp | ATTCAGTTTGGTCCAAAGTTACCTGATTACAATCCAGCATGCTTCTaGCCACAAATCCGGGGTGATTTCATCATCATCCTCATCATATTG | + |
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Preference number: 6 (lower is better) Translates to: IQFGPKLPDYNPACF*PQIRGDFIIILIIL Trigger: CAATATGATGAGGATGATGATGAAATCACCCCGGATTTGTGGCAAGAAGCATGCTGGATTGTAATCAGGTAACTTTGGACCAAACTGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000497845.1 |
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| CDS CCA 72 bp | ATTAGAAATCTTCTGCACGTTAACAGCATCATTAAATaGAGTGGCATCACCAATTTCACCCTTGTTAGCCGA | + |
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Preference number: 6 (lower is better) Translates to: IRNLLHVNSIIK*SGITNFTLVSR Trigger: TCGGCTAACAAGGGTGAAATTGGTGATGCCACTCCATTTAATGATGCTGTTAACGTGCAGAAGATTTCTAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000314595.6 ENST00000381227.5 ENST00000431623.6 ENST00000441246.6 ENST00000478188.5 ENST00000484821.1 |
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| CDS TCA 72 bp | CTGATCATAGAAACTTCAGACACAATGATGTCCATCTaGCGTCTCAATTTCCTTAGGGTGTTCATAAGTTGT | + |
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Preference number: 6 (lower is better) Translates to: LIIETSDTMMSI*RLNFLRVFISC Trigger: ACAACTTATGAACACCCTAAGGAAATTGAGACGTCAGATGGACATCATTGTGTCTGAAGTTTCTATGATCAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000314595.6 ENST00000381227.5 ENST00000431623.6 ENST00000441246.6 ENST00000478188.5 ENST00000510355.1 |
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| CDS CAA 72 bp | TCCAATTCATCTTCATTTTCAGGCAAGGTGACTGTTTaGCCTATAATAACATCATCTCCTGATACACGAACC | + |
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Preference number: 6 (lower is better) Translates to: SNSSSFSGKVTV*PIITSSPDTRT Trigger: GGTTCGTGTATCAGGAGATGATGTTATTATAGGCAAAACAGTCACCTTGCCTGAAAATGAAGATGAATTGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000314595.6 ENST00000381227.5 ENST00000431623.6 ENST00000441246.6 ENST00000464918.1 ENST00000478188.5 |
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| CDS CAA 90 bp | AAGCAGCATCACCTTTCTCTCAATCTGGAAATCTCAAAATCATTTTaGTCTCCAAGTTCCTCCTTCTACCCATCTATAAACATACCCTAT | + |
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Preference number: 6 (lower is better) Translates to: KQHHLSLNLEISKSF*SPSSSFYPSINIPY Trigger: ATAGGGTATGTTTATAGATGGGTAGAAGGAGGAACTTGGAGACAAAAATGATTTTGAGATTTCCAGATTGAGAGAAAGGTGATGCTGCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000478188.5 |
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| CDS TCA 72 bp | CTCCATTCTTCTAAAAATTCCAGAATTGGAGATGGTTaGGATCCAACTGAAATATACGCCATCAAGGCTAAA | + |
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Preference number: 6 (lower is better) Translates to: LHSSKNSRIGDG*DPTEIYAIKAK Trigger: TTTAGCCTTGATGGCGTATATTTCAGTTGGATCTCAACCATCTCCAATTCTGGAATTTTTAGAAGAATGGAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000314595.6 ENST00000381227.5 ENST00000431623.6 ENST00000441246.6 ENST00000478188.5 ENST00000510355.1 |
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| CDS CCA 72 bp | CTTGAACCAATGAAATTTAGTGCAACATTCTGTTCTTaGATGACAAAAGCTTCATCGAGAGAAGGTTTAACC | + |
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Preference number: 6 (lower is better) Translates to: LEPMKFSATFCS*MTKASSREGLT Trigger: GGTTAAACCTTCTCTCGATGAAGCTTTTGTCATCCAAGAACAGAATGTTGCACTAAATTTCATTGGTTCAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000314595.6 ENST00000381227.5 ENST00000431623.6 ENST00000441246.6 |
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| CDS CAA 72 bp | AGACATCTGAATAAACTCATCAAAAGAATCCAGCTGTaGTCTAACCAAGCCTTTCTCGTCAAAATAGGAACT | + |
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Preference number: 6 (lower is better) Translates to: RHLNKLIKRIQL*SNQAFLVKIGT Trigger: AGTTCCTATTTTGACGAGAAAGGCTTGGTTAGACAACAGCTGGATTCTTTTGATGAGTTTATTCAGATGTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000314595.6 ENST00000381227.5 ENST00000433463.1 ENST00000441246.6 ENST00000450656.5 |
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| CDS CAA 90 bp | TCTTTGAACAGACATCTGAATAAACTCATCAAAAGAATCCAGCTGTaGTCTAACCAAGCCTTTCTCGTCAAAATAGGAACTGATTACAAT | + |
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Preference number: 6 (lower is better) Translates to: SLNRHLNKLIKRIQL*SNQAFLVKIGTDYN Trigger: ATTGTAATCAGTTCCTATTTTGACGAGAAAGGCTTGGTTAGACAACAGCTGGATTCTTTTGATGAGTTTATTCAGATGTCTGTTCAAAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000314595.6 ENST00000381227.5 ENST00000433463.1 ENST00000441246.6 ENST00000450656.5 |
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