Pregenerated sensors for POLR1F (Homo sapiens)
Ensembl gene IDs: ENSG00000105849Ensembl transcript IDs: ENST00000222567.6
Found 100 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACTAGTGAGGTGTCTTGCACAGTGAAATGGGTGAATGATAGGAACTaGAGAGAGGGTAAGGGATCTAGTCTAGGCTATAGGGTTTGTATG | + |
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Preference number: 1 (lower is better) Translates to: TSEVSCTVKWVNDRN*REGKGSSLGYRVCM Trigger: CATACAAACCCTATAGCCTAGACTAGATCCCTTACCCTCTCTCCAGTTCCTATCATTCACCCATTTCACTGTGCAAGACACCTCACTAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222567.6 |
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| 3UTR CCA 90 bp | ATTTCTGTATCACTGGTGACTAGTGAGGTGTCTTGCACAGTGAAATaGGTGAATGATAGGAACTGGAGAGAGGGTAAGGGATCTAGTCTA | + |
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Preference number: 1 (lower is better) Translates to: ISVSLVTSEVSCTVK*VNDRNWREGKGSSL Trigger: TAGACTAGATCCCTTACCCTCTCTCCAGTTCCTATCATTCACCCATTTCACTGTGCAAGACACCTCACTAGTCACCAGTGATACAGAAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222567.6 |
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| 3UTR CCA 90 bp | CCACAAGGGAAGGAACTACATCTATCTTGTTTGCCATTGTATCCCTaGGCCTTAGCAGAATGTGTTATACAAAGTAGATGGTCAAGTGTG | + |
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Preference number: 1 (lower is better) Translates to: PQGKELHLSCLPLYP*ALAECVIQSRWSSV Trigger: CACACTTGACCATCTACTTTGTATAACACATTCTGCTAAGGCCCAGGGATACAATGGCAAACAAGATAGATGTAGTTCCTTCCCTTGTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222567.6 |
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| 3UTR GCA 90 bp | GCATGCACATTTAGCCTTGTCTGGAAAAAGTTTATGCGAAGGTGGTaGCTGAGGTCTTTTACATTAGATAACTTCTTAGTCCTCTGTCAG | + |
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Preference number: 1 (lower is better) Translates to: ACTFSLVWKKFMRRW*LRSFTLDNFLVLCQ Trigger: CTGACAGAGGACTAAGAAGTTATCTAATGTAAAAGACCTCAGGCACCACCTTCGCATAAACTTTTTCCAGACAAGGCTAAATGTGCATGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000222567.6 |
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| 3UTR TCA 90 bp | CATCTCAATTTGGACAAGCTACATTTCCAGGGCTCAATAGTCACATaGATCTCAATTGTAATCAAAGAGGTTGGCCTGCATCCTTCCATT | + |
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Preference number: 1 (lower is better) Translates to: HLNLDKLHFQGSIVT*ISIVIKEVGLHPSI Trigger: AATGGAAGGATGCAGGCCAACCTCTTTGATTACAATTGAGATTCATGTGACTATTGAGCCCTGGAAATGTAGCTTGTCCAAATTGAGATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222567.6 |
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| 3UTR CCA 90 bp | GAAGCATGCACATTTAGCCTTGTCTGGAAAAAGTTTATGCGAAGGTaGTGCCTGAGGTCTTTTACATTAGATAACTTCTTAGTCCTCTGT | + |
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Preference number: 1 (lower is better) Translates to: EACTFSLVWKKFMRR*CLRSFTLDNFLVLC Trigger: ACAGAGGACTAAGAAGTTATCTAATGTAAAAGACCTCAGGCACCACCTTCGCATAAACTTTTTCCAGACAAGGCTAAATGTGCATGCTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000222567.6 |
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| 3UTR-3UTR TCA 90 bp | GTGAAATGGGTGAATGATAGGAACTGGAGAGAGGGTAAGGGATCTAGTCTAGGCACAGGTAACAGTGAGTaGACAATCCTCCCCCTTTTT | + |
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Preference number: 2 (lower is better) Translates to: VKWVNDRNWREGKGSSLGTGNSE*TILPLF Trigger: AAAAAGGGGGAGGATTGTTCACTCACTGTTACCTGT...GCCTAGACTAGATCCCTTACCCTCTCTCCAGTTCCTATCATTCACCCATTTCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000222567.6 |
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| 3UTR-3UTR GCA 90 bp | AACTGGAGAGAGGGTAAGGGATCTAGTCTAGGCTATAGGGTTTGTATGAGCAAATCAAAGAGGTTGGCCTaGATCCTTCCATTGTCTAGC | + |
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Preference number: 2 (lower is better) Translates to: NWREGKGSSLGYRVCMSKSKRLA*ILPLSS Trigger: GCTAGACAATGGAAGGATGCAGGCCAACCTCTTTGA...TTTGCTCATACAAACCCTATAGCCTAGACTAGATCCCTTACCCTCTCTCCAGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222567.6 |
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| 3UTR-3UTR CCA 90 bp | GTGAAATGGGTGAATGATAGGAACTGGAGAGAGGGTAAGGGATCTAGTCTAGGCGTAGAGTGCAAAACCTaGAAGAATATGAGAGCTGAC | + |
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Preference number: 2 (lower is better) Translates to: VKWVNDRNWREGKGSSLGVECKT*KNMRAD Trigger: GTCAGCTCTCATATTCTTCCAGGTTTTGCACTCTAC...GCCTAGACTAGATCCCTTACCCTCTCTCCAGTTCCTATCATTCACCCATTTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000222567.6 |
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| 3UTR-3UTR CCA 90 bp | AACTGGAGAGAGGGTAAGGGATCTAGTCTAGGCTATAGGGTTTGTATGAGCAAACAGTCAGTACTGGCCTaGCTTTTAAGAGCTGTGAAG | + |
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Preference number: 2 (lower is better) Translates to: NWREGKGSSLGYRVCMSKQSVLA*LLRAVK Trigger: CTTCACAGCTCTTAAAAGCCAGGCCAGTACTGACTG...TTTGCTCATACAAACCCTATAGCCTAGACTAGATCCCTTACCCTCTCTCCAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000222567.6 |
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| 3UTR-3UTR CCA 90 bp | AACTGGAGAGAGGGTAAGGGATCTAGTCTAGGCTATAGGGTTTGTATGAGCAAATTGCCATTGTATCCCTaGGCCTTAGCAGAATGTGTT | + |
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Preference number: 2 (lower is better) Translates to: NWREGKGSSLGYRVCMSKLPLYP*ALAECV Trigger: AACACATTCTGCTAAGGCCCAGGGATACAATGGCAA...TTTGCTCATACAAACCCTATAGCCTAGACTAGATCCCTTACCCTCTCTCCAGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222567.6 |
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| 3UTR-3UTR CCA 90 bp | AGTGAGGTGTCTTGCACAGTGAAATGGGTGAATGATAGGAACTGGAGAGAGGGTACAAAAATGCTGACATaGGAGTTCAACCATTCATGC | + |
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Preference number: 2 (lower is better) Translates to: SEVSCTVKWVNDRNWREGTKMLT*EFNHSC Trigger: GCATGAATGGTTGAACTCCCATGTCAGCATTTTTGT...ACCCTCTCTCCAGTTCCTATCATTCACCCATTTCACTGTGCAAGACACCTCACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000222567.6 |
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| 3UTR-3UTR TCA 90 bp | AGTGAGGTGTCTTGCACAGTGAAATGGGTGAATGATAGGAACTGGAGAGAGGGTCAAGTGTGTGGAAAATaGATAAATATGGCCATGCAT | + |
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Preference number: 2 (lower is better) Translates to: SEVSCTVKWVNDRNWREGQVCGK*INMAMH Trigger: ATGCATGGCCATATTTATTCATTTTCCACACACTTG...ACCCTCTCTCCAGTTCCTATCATTCACCCATTTCACTGTGCAAGACACCTCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000222567.6 |
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| 3UTR-3UTR GCA 90 bp | AACTGGAGAGAGGGTAAGGGATCTAGTCTAGGCTATAGGGTTTGTATGAGCAAAGAACATCTGCCACTCTaGCAATTCTATATCCCATCA | + |
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Preference number: 2 (lower is better) Translates to: NWREGKGSSLGYRVCMSKEHLPL*QFYIPS Trigger: TGATGGGATATAGAATTGGCAGAGTGGCAGATGTTC...TTTGCTCATACAAACCCTATAGCCTAGACTAGATCCCTTACCCTCTCTCCAGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222567.6 |
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| 3UTR-3UTR CCA 90 bp | AACTGGAGAGAGGGTAAGGGATCTAGTCTAGGCTATAGGGTTTGTATGAGCAAACAGCACATCTCAATTTaGACAAGCTACATTTCCAGG | + |
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Preference number: 2 (lower is better) Translates to: NWREGKGSSLGYRVCMSKQHISI*TSYISR Trigger: CCTGGAAATGTAGCTTGTCCAAATTGAGATGTGCTG...TTTGCTCATACAAACCCTATAGCCTAGACTAGATCCCTTACCCTCTCTCCAGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222567.6 |
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| 3UTR-3UTR CCA 90 bp | AGTGAGGTGTCTTGCACAGTGAAATGGGTGAATGATAGGAACTGGAGAGAGGGTTCTAGGAAAGACAAATaGCCAGATCTGACTTTTCAA | + |
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Preference number: 2 (lower is better) Translates to: SEVSCTVKWVNDRNWREGSRKDK*PDLTFQ Trigger: TTGAAAAGTCAGATCTGGCCATTTGTCTTTCCTAGA...ACCCTCTCTCCAGTTCCTATCATTCACCCATTTCACTGTGCAAGACACCTCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000222567.6 |
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| 3UTR-3UTR TCA 90 bp | GTTAGTGCAGCATGTGCCAAATGTTTTGAAGAATACATAGTGGACACCATCATCAAACCTGGAAGAATATaGGAGCTGACAGTGAGAGCA | + |
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Preference number: 2 (lower is better) Translates to: VSAACAKCFEEYIVDTIIKPGRI*ELTVRA Trigger: TGCTCTCACTGTCAGCTCTCATATTCTTCCAGGTTT...GATGATGGTGTCCACTATGTATTCTTCAAAACATTTGGCACATGCTGCACTAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000222567.6 |
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| 3UTR-3UTR TCA 90 bp | GTTAGTGCAGCATGTGCCAAATGTTTTGAAGAATACATAGTGGACACCATCATCCCAAATATTAAGCTGTaGGACCAGCACTATGTCTGG | + |
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Preference number: 2 (lower is better) Translates to: VSAACAKCFEEYIVDTIIPNIKL*DQHYVW Trigger: CCAGACATAGTGCTGGTCTCACAGCTTAATATTTGG...GATGATGGTGTCCACTATGTATTCTTCAAAACATTTGGCACATGCTGCACTAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000222567.6 |
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| 3UTR-3UTR TCA 90 bp | AACTGGAGAGAGGGTAAGGGATCTAGTCTAGGCTATAGGGTTTGTATGAGCAAAACAAATGGCCAGATCTaGCTTTTCAAAACTACTCAC | + |
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Preference number: 2 (lower is better) Translates to: NWREGKGSSLGYRVCMSKTNGQI*LFKTTH Trigger: GTGAGTAGTTTTGAAAAGTCAGATCTGGCCATTTGT...TTTGCTCATACAAACCCTATAGCCTAGACTAGATCCCTTACCCTCTCTCCAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000222567.6 |
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| 3UTR-3UTR TCA 90 bp | GTTTTTCTTCTCCAAGGGTCAAAATGCTGCTCTTCCAACAACAAGCTTAAACACTTTCTGTATCACTGGTaGCTAGTGAGGTGTCTTGCA | + |
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Preference number: 2 (lower is better) Translates to: VFLLQGSKCCSSNNKLKHFLYHW*LVRCLA Trigger: TGCAAGACACCTCACTAGTCACCAGTGATACAGAAA...GTGTTTAAGCTTGTTGTTGGAAGAGCAGCATTTTGACCCTTGGAGAAGAAAAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000222567.6 |
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| 3UTR-3UTR GCA 90 bp | AACTGGAGAGAGGGTAAGGGATCTAGTCTAGGCTATAGGGTTTGTATGAGCAAAGTTTCAAGTTCAGCATaGCGTTCCCTGTTTAATTCA | + |
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Preference number: 2 (lower is better) Translates to: NWREGKGSSLGYRVCMSKVSSSA*RSLFNS Trigger: TGAATTAAACAGGGAACGGCATGCTGAACTTGAAAC...TTTGCTCATACAAACCCTATAGCCTAGACTAGATCCCTTACCCTCTCTCCAGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222567.6 |
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| 3UTR-3UTR CCA 90 bp | AGTGAGGTGTCTTGCACAGTGAAATGGGTGAATGATAGGAACTGGAGAGAGGGTTTACTAAGCATTTCCTaGGTATGCCACTATATTAAG | + |
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Preference number: 2 (lower is better) Translates to: SEVSCTVKWVNDRNWREGLLSIS*VCHYIK Trigger: CTTAATATAGTGGCATACCCAGGAAATGCTTAGTAA...ACCCTCTCTCCAGTTCCTATCATTCACCCATTTCACTGTGCAAGACACCTCACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222567.6 |
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| 3UTR-3UTR GCA 90 bp | GTTAGTGCAGCATGTGCCAAATGTTTTGAAGAATACATAGTGGACACCATCATCTACATCTATCTTGTTTaGCATTGTATCCCTGGGCCT | + |
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Preference number: 2 (lower is better) Translates to: VSAACAKCFEEYIVDTIIYIYLV*HCIPGP Trigger: AGGCCCAGGGATACAATGGCAAACAAGATAGATGTA...GATGATGGTGTCCACTATGTATTCTTCAAAACATTTGGCACATGCTGCACTAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000222567.6 |
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| 3UTR-3UTR CCA 90 bp | GTTAGTGCAGCATGTGCCAAATGTTTTGAAGAATACATAGTGGACACCATCATCTGTAATCAAAGAGGTTaGCCTGCATCCTTCCATTGT | + |
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Preference number: 2 (lower is better) Translates to: VSAACAKCFEEYIVDTIICNQRG*PASFHC Trigger: ACAATGGAAGGATGCAGGCCAACCTCTTTGATTACA...GATGATGGTGTCCACTATGTATTCTTCAAAACATTTGGCACATGCTGCACTAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000222567.6 |
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| 3UTR-3UTR TCA 90 bp | CAAGCTACATTTCCAGGGCTCAATAGTCACATGAATCTCAATTGTAATCAAAGACATCTGTTTCTCTTATaGCATGCCACAAGGGAAGGA | + |
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Preference number: 2 (lower is better) Translates to: QATFPGLNSHMNLNCNQRHLFLL*HATREG Trigger: TCCTTCCCTTGTGGCATGTCATAAGAGAAACAGATG...TCTTTGATTACAATTGAGATTCATGTGACTATTGAGCCCTGGAAATGTAGCTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222567.6 |
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| 3UTR-3UTR TCA 90 bp | CAAGCTACATTTCCAGGGCTCAATAGTCACATGAATCTCAATTGTAATCAAAGAACTTGTAGACAATTGTaGACATCTGCCACTCTGCCA | + |
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Preference number: 2 (lower is better) Translates to: QATFPGLNSHMNLNCNQRTCRQL*TSATLP Trigger: TGGCAGAGTGGCAGATGTTCACAATTGTCTACAAGT...TCTTTGATTACAATTGAGATTCATGTGACTATTGAGCCCTGGAAATGTAGCTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222567.6 |
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| 3UTR-3UTR CCA 90 bp | AACTGGAGAGAGGGTAAGGGATCTAGTCTAGGCTATAGGGTTTGTATGAGCAAAGTTATACAAAGTAGATaGTCAAGTGTGTGGAAAATG | + |
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Preference number: 2 (lower is better) Translates to: NWREGKGSSLGYRVCMSKVIQSR*SSVWKM Trigger: CATTTTCCACACACTTGACCATCTACTTTGTATAAC...TTTGCTCATACAAACCCTATAGCCTAGACTAGATCCCTTACCCTCTCTCCAGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000222567.6 |
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| 3UTR-3UTR GCA 90 bp | CAAGCTACATTTCCAGGGCTCAATAGTCACATGAATCTCAATTGTAATCAAAGAACAATTGTGAACATCTaGCACTCTGCCAATTCTATA | + |
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Preference number: 2 (lower is better) Translates to: QATFPGLNSHMNLNCNQRTIVNI*HSANSI Trigger: TATAGAATTGGCAGAGTGGCAGATGTTCACAATTGT...TCTTTGATTACAATTGAGATTCATGTGACTATTGAGCCCTGGAAATGTAGCTTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222567.6 |
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| 3UTR CCA 72 bp | TCACTGGTGACTAGTGAGGTGTCTTGCACAGTGAAATaGGTGAATGATAGGAACTGGAGAGAGGGTAAGGGA | + |
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Preference number: 3 (lower is better) Translates to: SLVTSEVSCTVK*VNDRNWREGKG Trigger: TCCCTTACCCTCTCTCCAGTTCCTATCATTCACCCATTTCACTGTGCAAGACACCTCACTAGTCACCAGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222567.6 |
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| 3UTR-3UTR CAA 90 bp | GTGAAATGGGTGAATGATAGGAACTGGAGAGAGGGTAAGGGATCTAGTCTAGGCAATTTGCCATCTTTCTaGTGTCTATGGAAAAGGGGT | + |
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Preference number: 3 (lower is better) Translates to: VKWVNDRNWREGKGSSLGNLPSF*CLWKRG Trigger: ACCCCTTTTCCATAGACACAAGAAAGATGGCAAATT...GCCTAGACTAGATCCCTTACCCTCTCTCCAGTTCCTATCATTCACCCATTTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000222567.6 |
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| 3UTR-3UTR CAA 90 bp | GTTAGTGCAGCATGTGCCAAATGTTTTGAAGAATACATAGTGGACACCATCATCCTATCTTGTTTGCCATaGTATCCCTGGGCCTTAGCA | + |
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Preference number: 3 (lower is better) Translates to: VSAACAKCFEEYIVDTIILSCLP*YPWALA Trigger: TGCTAAGGCCCAGGGATACAATGGCAAACAAGATAG...GATGATGGTGTCCACTATGTATTCTTCAAAACATTTGGCACATGCTGCACTAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000222567.6 |
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| 3UTR-3UTR CAA 90 bp | GTTAGTGCAGCATGTGCCAAATGTTTTGAAGAATACATAGTGGACACCATCATCCTACATCTATCTTGTTaGCCATTGTATCCCTGGGCC | + |
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Preference number: 3 (lower is better) Translates to: VSAACAKCFEEYIVDTIILHLSC*PLYPWA Trigger: GGCCCAGGGATACAATGGCAAACAAGATAGATGTAG...GATGATGGTGTCCACTATGTATTCTTCAAAACATTTGGCACATGCTGCACTAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000222567.6 |
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| 3UTR TCA 72 bp | TTGGACAAGCTACATTTCCAGGGCTCAATAGTCACATaGATCTCAATTGTAATCAAAGAGGTTGGCCTGCAT | + |
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Preference number: 3 (lower is better) Translates to: LDKLHFQGSIVT*ISIVIKEVGLH Trigger: ATGCAGGCCAACCTCTTTGATTACAATTGAGATTCATGTGACTATTGAGCCCTGGAAATGTAGCTTGTCCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222567.6 |
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| 3UTR-3UTR CAA 90 bp | GTTTTTCTTCTCCAAGGGTCAAAATGCTGCTCTTCCAACAACAAGCTTAAACACACAGCACATCTCAATTaGGACAAGCTACATTTCCAG | + |
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Preference number: 3 (lower is better) Translates to: VFLLQGSKCCSSNNKLKHTAHLN*DKLHFQ Trigger: CTGGAAATGTAGCTTGTCCAAATTGAGATGTGCTGT...GTGTTTAAGCTTGTTGTTGGAAGAGCAGCATTTTGACCCTTGGAGAAGAAAAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000222567.6 |
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| 3UTR CCA 72 bp | CCCTGGGCCTTAGCAGAATGTGTTATACAAAGTAGATaGTCAAGTGTGTGGAAAATGAATAAATATGGCCAT | + |
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Preference number: 3 (lower is better) Translates to: PWALAECVIQSR*SSVWKMNKYGH Trigger: ATGGCCATATTTATTCATTTTCCACACACTTGACCATCTACTTTGTATAACACATTCTGCTAAGGCCCAGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000222567.6 |
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| 3UTR CCA 72 bp | AAGGAACTACATCTATCTTGTTTGCCATTGTATCCCTaGGCCTTAGCAGAATGTGTTATACAAAGTAGATGG | + |
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Preference number: 3 (lower is better) Translates to: KELHLSCLPLYP*ALAECVIQSRW Trigger: CCATCTACTTTGTATAACACATTCTGCTAAGGCCCAGGGATACAATGGCAAACAAGATAGATGTAGTTCCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222567.6 |
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| 3UTR-3UTR CAA 90 bp | CAAGCTACATTTCCAGGGCTCAATAGTCACATGAATCTCAATTGTAATCAAAGAGGAACTACATCTATCTaGTTTGCCATTGTATCCCTG | + |
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Preference number: 3 (lower is better) Translates to: QATFPGLNSHMNLNCNQRGTTSI*FAIVSL Trigger: CAGGGATACAATGGCAAACAAGATAGATGTAGTTCC...TCTTTGATTACAATTGAGATTCATGTGACTATTGAGCCCTGGAAATGTAGCTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222567.6 |
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| 3UTR-3UTR CAA 90 bp | GTTTTTCTTCTCCAAGGGTCAAAATGCTGCTCTTCCAACAACAAGCTTAAACACTGGGAACTTGCTTATTaGCTAAGCCACAATGTATTT | + |
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Preference number: 3 (lower is better) Translates to: VFLLQGSKCCSSNNKLKHWELAY*LSHNVF Trigger: AAATACATTGTGGCTTAGCAAATAAGCAAGTTCCCA...GTGTTTAAGCTTGTTGTTGGAAGAGCAGCATTTTGACCCTTGGAGAAGAAAAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000222567.6 |
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| 3UTR GCA 72 bp | ATTGTGTGTATATGCACATCTGTTTCTCTTATGACATaGCACAAGGGAAGGAACTACATCTATCTTGTTTGC | + |
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Preference number: 3 (lower is better) Translates to: IVCICTSVSLMT*HKGRNYIYLVC Trigger: GCAAACAAGATAGATGTAGTTCCTTCCCTTGTGGCATGTCATAAGAGAAACAGATGTGCATATACACACAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222567.6 |
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| 3UTR GCA 72 bp | TTTAGCCTTGTCTGGAAAAAGTTTATGCGAAGGTGGTaGCTGAGGTCTTTTACATTAGATAACTTCTTAGTC | + |
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Preference number: 3 (lower is better) Translates to: FSLVWKKFMRRW*LRSFTLDNFLV Trigger: GACTAAGAAGTTATCTAATGTAAAAGACCTCAGGCACCACCTTCGCATAAACTTTTTCCAGACAAGGCTAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000222567.6 |
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| 3UTR CCA 72 bp | ACATTTAGCCTTGTCTGGAAAAAGTTTATGCGAAGGTaGTGCCTGAGGTCTTTTACATTAGATAACTTCTTA | + |
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Preference number: 3 (lower is better) Translates to: TFSLVWKKFMRR*CLRSFTLDNFL Trigger: TAAGAAGTTATCTAATGTAAAAGACCTCAGGCACCACCTTCGCATAAACTTTTTCCAGACAAGGCTAAATGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000222567.6 |
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| CDS-3UTR GCA 90 bp | AACTGGAGAGAGGGTAAGGGATCTAGTCTAGGCTATAGGGTTTGTATGAGCAAAGCGATGTGCCTTTGGTaGGGCCCGGCCACCAGGCAT | + |
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Preference number: 4 (lower is better) Translates to: NWREGKGSSLGYRVCMSKAMCLW*GPATRH Trigger: ATGCCTGGTGGCCGGGCCGCACCAAAGGCACATCGC...TTTGCTCATACAAACCCTATAGCCTAGACTAGATCCCTTACCCTCTCTCCAGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222567.6 |
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| CDS-3UTR GCA 90 bp | GTTAGTGCAGCATGTGCCAAATGTTTTGAAGAATACATAGTGGACACCATCATCGGCGACAGCGCGATGTaGCTTTGGTGCGGCCCGGCC | + |
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Preference number: 4 (lower is better) Translates to: VSAACAKCFEEYIVDTIIGDSAM*LWCGPA Trigger: GGCCGGGCCGCACCAAAGGCACATCGCGCTGTCGCC...GATGATGGTGTCCACTATGTATTCTTCAAAACATTTGGCACATGCTGCACTAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000222567.6 |
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| CDS-3UTR TCA 90 bp | GTTAGTGCAGCATGTGCCAAATGTTTTGAAGAATACATAGTGGACACCATCATCTGGCCGCGGCGCCTCTaGGCAACCTGCAGCCATGCT | + |
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Preference number: 4 (lower is better) Translates to: VSAACAKCFEEYIVDTIIWPRRL*ATCSHA Trigger: AGCATGGCTGCAGGTTGCTCAGAGGCGCCGCGGCCA...GATGATGGTGTCCACTATGTATTCTTCAAAACATTTGGCACATGCTGCACTAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000222567.6 |
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| CDS-3UTR TCA 90 bp | AACTGGAGAGAGGGTAAGGGATCTAGTCTAGGCTATAGGGTTTGTATGAGCAAACCCGGCCACCAGGCATaGGTAGCGACTGTTCACCAG | + |
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Preference number: 4 (lower is better) Translates to: NWREGKGSSLGYRVCMSKPGHQA*VATVHQ Trigger: CTGGTGAACAGTCGCTACTCATGCCTGGTGGCCGGG...TTTGCTCATACAAACCCTATAGCCTAGACTAGATCCCTTACCCTCTCTCCAGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222567.6 |
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| CDS-3UTR CCA 90 bp | GTTAGTGCAGCATGTGCCAAATGTTTTGAAGAATACATAGTGGACACCATCATCAGCGCGATGTGCCTTTaGTGCGGCCCGGCCACCAGG | + |
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Preference number: 4 (lower is better) Translates to: VSAACAKCFEEYIVDTIISAMCL*CGPATR Trigger: CCTGGTGGCCGGGCCGCACCAAAGGCACATCGCGCT...GATGATGGTGTCCACTATGTATTCTTCAAAACATTTGGCACATGCTGCACTAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000222567.6 |
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| CDS-3UTR GCA 90 bp | GTTAGTGCAGCATGTGCCAAATGTTTTGAAGAATACATAGTGGACACCATCATCGGCAGGACGCCAGCCTaGCCTACCAGAGACCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: VSAACAKCFEEYIVDTIIGRTPA*PTRDPS Trigger: TGATGGGTCTCTGGTAGGGCAGGCTGGCGTCCTGCC...GATGATGGTGTCCACTATGTATTCTTCAAAACATTTGGCACATGCTGCACTAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000222567.6 |
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| CDS-3UTR GCA 90 bp | GTGAAATGGGTGAATGATAGGAACTGGAGAGAGGGTAAGGGATCTAGTCTAGGCTCAAAGAGGTTGGCCTaGATCCTTCCATTGTCTAGC | + |
|
Preference number: 4 (lower is better) Translates to: VKWVNDRNWREGKGSSLGSKRLA*ILPLSS Trigger: GCTAGACAATGGAAGGATGCAGGCCAACCTCTTTGA...GCCTAGACTAGATCCCTTACCCTCTCTCCAGTTCCTATCATTCACCCATTTCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222567.6 |
||
| CDS-3UTR TCA 90 bp | GTGAAATGGGTGAATGATAGGAACTGGAGAGAGGGTAAGGGATCTAGTCTAGGCACTTGTAGACAATTGTaGACATCTGCCACTCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: VKWVNDRNWREGKGSSLGTCRQL*TSATLP Trigger: TGGCAGAGTGGCAGATGTTCACAATTGTCTACAAGT...GCCTAGACTAGATCCCTTACCCTCTCTCCAGTTCCTATCATTCACCCATTTCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222567.6 |
||
| CDS-3UTR TCA 90 bp | AGTGAGGTGTCTTGCACAGTGAAATGGGTGAATGATAGGAACTGGAGAGAGGGTTTTCTGTATCACTGGTaGCTAGTGAGGTGTCTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SEVSCTVKWVNDRNWREGFLYHW*LVRCLA Trigger: TGCAAGACACCTCACTAGTCACCAGTGATACAGAAA...ACCCTCTCTCCAGTTCCTATCATTCACCCATTTCACTGTGCAAGACACCTCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000222567.6 |
||
| CDS-3UTR GCA 90 bp | AGTGAGGTGTCTTGCACAGTGAAATGGGTGAATGATAGGAACTGGAGAGAGGGTGAACATCTGCCACTCTaGCAATTCTATATCCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: SEVSCTVKWVNDRNWREGEHLPL*QFYIPS Trigger: TGATGGGATATAGAATTGGCAGAGTGGCAGATGTTC...ACCCTCTCTCCAGTTCCTATCATTCACCCATTTCACTGTGCAAGACACCTCACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222567.6 |
||
| CDS-3UTR GCA 90 bp | GTGAAATGGGTGAATGATAGGAACTGGAGAGAGGGTAAGGGATCTAGTCTAGGCCAAGGGTCAAAATGCTaGTCTTCCAACAACAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: VKWVNDRNWREGKGSSLGQGSKC*SSNNKL Trigger: AAGCTTGTTGTTGGAAGAGCAGCATTTTGACCCTTG...GCCTAGACTAGATCCCTTACCCTCTCTCCAGTTCCTATCATTCACCCATTTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000222567.6 |
||
| CDS-3UTR CCA 90 bp | AGTGAGGTGTCTTGCACAGTGAAATGGGTGAATGATAGGAACTGGAGAGAGGGTTGTAATCAAAGAGGTTaGCCTGCATCCTTCCATTGT | + |
|
Preference number: 4 (lower is better) Translates to: SEVSCTVKWVNDRNWREGCNQRG*PASFHC Trigger: ACAATGGAAGGATGCAGGCCAACCTCTTTGATTACA...ACCCTCTCTCCAGTTCCTATCATTCACCCATTTCACTGTGCAAGACACCTCACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222567.6 |
||
| CDS-3UTR CCA 90 bp | GTGAAATGGGTGAATGATAGGAACTGGAGAGAGGGTAAGGGATCTAGTCTAGGCCAGCACATCTCAATTTaGACAAGCTACATTTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VKWVNDRNWREGKGSSLGQHISI*TSYISR Trigger: CCTGGAAATGTAGCTTGTCCAAATTGAGATGTGCTG...GCCTAGACTAGATCCCTTACCCTCTCTCCAGTTCCTATCATTCACCCATTTCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222567.6 |
||
| 3UTR CAA 72 bp | GACATGCCACAAGGGAAGGAACTACATCTATCTTGTTaGCCATTGTATCCCTGGGCCTTAGCAGAATGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: DMPQGKELHLSC*PLYPWALAECV Trigger: AACACATTCTGCTAAGGCCCAGGGATACAATGGCAAACAAGATAGATGTAGTTCCTTCCCTTGTGGCATGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222567.6 |
||
| CDS-3UTR GCA 90 bp | GTTTTTCTTCTCCAAGGGTCAAAATGCTGCTCTTCCAACAACAAGCTTAAACACTCCATGGTTTGCCACTaGTCAGCTGACAACTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: VFLLQGSKCCSSNNKLKHSMVCH*SADNCS Trigger: TGAGCAGTTGTCAGCTGAGCAGTGGCAAACCATGGA...GTGTTTAAGCTTGTTGTTGGAAGAGCAGCATTTTGACCCTTGGAGAAGAAAAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000222567.6 |
||
| CDS-3UTR GCA 90 bp | GTGAAATGGGTGAATGATAGGAACTGGAGAGAGGGTAAGGGATCTAGTCTAGGCGCATTATTAGTATTCTaGAGGGCTGACTCTTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: VKWVNDRNWREGKGSSLGALLVF*RADSSI Trigger: AATGGAAGAGTCAGCCCTGCAGAATACTAATAATGC...GCCTAGACTAGATCCCTTACCCTCTCTCCAGTTCCTATCATTCACCCATTTCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222567.6 |
||
| CDS-3UTR GCA 90 bp | GTGAAATGGGTGAATGATAGGAACTGGAGAGAGGGTAAGGGATCTAGTCTAGGCTTTATGCGAAGGTGGTaGCTGAGGTCTTTTACATTA | + |
|
Preference number: 4 (lower is better) Translates to: VKWVNDRNWREGKGSSLGFMRRW*LRSFTL Trigger: TAATGTAAAAGACCTCAGGCACCACCTTCGCATAAA...GCCTAGACTAGATCCCTTACCCTCTCTCCAGTTCCTATCATTCACCCATTTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000222567.6 |
||
| CDS-3UTR CCA 90 bp | AACTGGAGAGAGGGTAAGGGATCTAGTCTAGGCTATAGGGTTTGTATGAGCAAACATCTGCTAGCTTTGTaGTACCACTGTCCACTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: NWREGKGSSLGYRVCMSKHLLAL*YHCPLH Trigger: ATGAAGTGGACAGTGGTACCACAAAGCTAGCAGATG...TTTGCTCATACAAACCCTATAGCCTAGACTAGATCCCTTACCCTCTCTCCAGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222567.6 |
||
| CDS-3UTR TCA 90 bp | CAAGCTACATTTCCAGGGCTCAATAGTCACATGAATCTCAATTGTAATCAAAGAACAGGGTCCTGGTCCTaGACTTCCTGGTGCTTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: QATFPGLNSHMNLNCNQRTGSWS*TSWCFF Trigger: GAAAAAGCACCAGGAAGTTCAGGACCAGGACCCTGT...TCTTTGATTACAATTGAGATTCATGTGACTATTGAGCCCTGGAAATGTAGCTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000222567.6 |
||
| CDS-3UTR GCA 90 bp | CAAGCTACATTTCCAGGGCTCAATAGTCACATGAATCTCAATTGTAATCAAAGAAGCAACCTGCAGCCATaGTGCTTGTCAAGGTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: QATFPGLNSHMNLNCNQRSNLQP*CLSRFP Trigger: TGGGAACCTTGACAAGCAGCATGGCTGCAGGTTGCT...TCTTTGATTACAATTGAGATTCATGTGACTATTGAGCCCTGGAAATGTAGCTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222567.6 |
||
| CDS-3UTR GCA 90 bp | GTGAAATGGGTGAATGATAGGAACTGGAGAGAGGGTAAGGGATCTAGTCTAGGCACAATTGTGAACATCTaGCACTCTGCCAATTCTATA | + |
|
Preference number: 4 (lower is better) Translates to: VKWVNDRNWREGKGSSLGTIVNI*HSANSI Trigger: TATAGAATTGGCAGAGTGGCAGATGTTCACAATTGT...GCCTAGACTAGATCCCTTACCCTCTCTCCAGTTCCTATCATTCACCCATTTCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222567.6 |
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| CDS-3UTR CCA 90 bp | GTTAGTGCAGCATGTGCCAAATGTTTTGAAGAATACATAGTGGACACCATCATCCAGTCAGTACTGGCCTaGCTTTTAAGAGCTGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VSAACAKCFEEYIVDTIIQSVLA*LLRAVK Trigger: CTTCACAGCTCTTAAAAGCCAGGCCAGTACTGACTG...GATGATGGTGTCCACTATGTATTCTTCAAAACATTTGGCACATGCTGCACTAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000222567.6 |
||
| CDS-3UTR CCA 90 bp | GTTTTTCTTCTCCAAGGGTCAAAATGCTGCTCTTCCAACAACAAGCTTAAACACGTCAGGTTCTCCACCTaGAATGCCACAGCTAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: VFLLQGSKCCSSNNKLKHVRFST*NATASF Trigger: AAAACTAGCTGTGGCATTCCAGGTGGAGAACCTGAC...GTGTTTAAGCTTGTTGTTGGAAGAGCAGCATTTTGACCCTTGGAGAAGAAAAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000222567.6 |
||
| CDS-3UTR CCA 90 bp | AGTGAGGTGTCTTGCACAGTGAAATGGGTGAATGATAGGAACTGGAGAGAGGGTACATTTAGCCTTGTCTaGAAAAAGTTTATGCGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SEVSCTVKWVNDRNWREGTFSLV*KKFMRR Trigger: CCTTCGCATAAACTTTTTCCAGACAAGGCTAAATGT...ACCCTCTCTCCAGTTCCTATCATTCACCCATTTCACTGTGCAAGACACCTCACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000222567.6 |
||
| CDS-3UTR TCA 90 bp | CAAGCTACATTTCCAGGGCTCAATAGTCACATGAATCTCAATTGTAATCAAAGAAGTATTCTGCAGGGCTaGCTCTTCCATTGGAGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: QATFPGLNSHMNLNCNQRSILQG*LFHWSV Trigger: GACACTCCAATGGAAGAGTCAGCCCTGCAGAATACT...TCTTTGATTACAATTGAGATTCATGTGACTATTGAGCCCTGGAAATGTAGCTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222567.6 |
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| CDS-3UTR CCA 90 bp | GTTAGTGCAGCATGTGCCAAATGTTTTGAAGAATACATAGTGGACACCATCATCCACTTTGGTAACCACTaGAGTCACTGCCTTGGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: VSAACAKCFEEYIVDTIIHFGNH*SHCLGK Trigger: TTTTCCAAGGCAGTGACTCCAGTGGTTACCAAAGTG...GATGATGGTGTCCACTATGTATTCTTCAAAACATTTGGCACATGCTGCACTAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000222567.6 |
||
| CDS-3UTR CCA 90 bp | GTGAAATGGGTGAATGATAGGAACTGGAGAGAGGGTAAGGGATCTAGTCTAGGCTTACTAAGCATTTCCTaGGTATGCCACTATATTAAG | + |
|
Preference number: 4 (lower is better) Translates to: VKWVNDRNWREGKGSSLGLLSIS*VCHYIK Trigger: CTTAATATAGTGGCATACCCAGGAAATGCTTAGTAA...GCCTAGACTAGATCCCTTACCCTCTCTCCAGTTCCTATCATTCACCCATTTCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222567.6 |
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| CDS-3UTR CCA 90 bp | GTTTTTCTTCTCCAAGGGTCAAAATGCTGCTCTTCCAACAACAAGCTTAAACACGTGAATGATAGGAACTaGAGAGAGGGTAAGGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: VFLLQGSKCCSSNNKLKHVNDRN*REGKGS Trigger: AGATCCCTTACCCTCTCTCCAGTTCCTATCATTCAC...GTGTTTAAGCTTGTTGTTGGAAGAGCAGCATTTTGACCCTTGGAGAAGAAAAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000222567.6 |
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| CDS-3UTR GCA 90 bp | GTTAGTGCAGCATGTGCCAAATGTTTTGAAGAATACATAGTGGACACCATCATCTTAGTTTTCCCCGAATaGAGAATACTCCAGCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: VSAACAKCFEEYIVDTIILVFPE*RILQQH Trigger: ATGCTGCTGGAGTATTCTGCATTCGGGGAAAACTAA...GATGATGGTGTCCACTATGTATTCTTCAAAACATTTGGCACATGCTGCACTAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000222567.6 |
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| CDS-3UTR GCA 90 bp | GTTTTTCTTCTCCAAGGGTCAAAATGCTGCTCTTCCAACAACAAGCTTAAACACTACATCTATCTTGTTTaGCATTGTATCCCTGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VFLLQGSKCCSSNNKLKHYIYLV*HCIPGP Trigger: AGGCCCAGGGATACAATGGCAAACAAGATAGATGTA...GTGTTTAAGCTTGTTGTTGGAAGAGCAGCATTTTGACCCTTGGAGAAGAAAAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000222567.6 |
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| CDS-3UTR GCA 90 bp | GTTAGTGCAGCATGTGCCAAATGTTTTGAAGAATACATAGTGGACACCATCATCACTAGTGAGGTGTCTTaGACAGTGAAATGGGTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: VSAACAKCFEEYIVDTIITSEVS*TVKWVN Trigger: ATTCACCCATTTCACTGTGCAAGACACCTCACTAGT...GATGATGGTGTCCACTATGTATTCTTCAAAACATTTGGCACATGCTGCACTAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000222567.6 |
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| CDS-3UTR CCA 90 bp | AACTGGAGAGAGGGTAAGGGATCTAGTCTAGGCTATAGGGTTTGTATGAGCAAATCTAGGAAAGACAAATaGCCAGATCTGACTTTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: NWREGKGSSLGYRVCMSKSRKDK*PDLTFQ Trigger: TTGAAAAGTCAGATCTGGCCATTTGTCTTTCCTAGA...TTTGCTCATACAAACCCTATAGCCTAGACTAGATCCCTTACCCTCTCTCCAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000222567.6 |
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| CDS-3UTR CCA 90 bp | GTTAGTGCAGCATGTGCCAAATGTTTTGAAGAATACATAGTGGACACCATCATCTCTTGCACAGTGAAATaGGTGAATGATAGGAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: VSAACAKCFEEYIVDTIISCTVK*VNDRNW Trigger: CCAGTTCCTATCATTCACCCATTTCACTGTGCAAGA...GATGATGGTGTCCACTATGTATTCTTCAAAACATTTGGCACATGCTGCACTAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000222567.6 |
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| CDS-3UTR TCA 90 bp | CAAGCTACATTTCCAGGGCTCAATAGTCACATGAATCTCAATTGTAATCAAAGAAAACCTGGAAGAATATaGGAGCTGACAGTGAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: QATFPGLNSHMNLNCNQRKPGRI*ELTVRA Trigger: TGCTCTCACTGTCAGCTCTCATATTCTTCCAGGTTT...TCTTTGATTACAATTGAGATTCATGTGACTATTGAGCCCTGGAAATGTAGCTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000222567.6 |
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| CDS-3UTR GCA 90 bp | GTTTTTCTTCTCCAAGGGTCAAAATGCTGCTCTTCCAACAACAAGCTTAAACACGTTTCAAGTTCAGCATaGCGTTCCCTGTTTAATTCA | + |
|
Preference number: 4 (lower is better) Translates to: VFLLQGSKCCSSNNKLKHVSSSA*RSLFNS Trigger: TGAATTAAACAGGGAACGGCATGCTGAACTTGAAAC...GTGTTTAAGCTTGTTGTTGGAAGAGCAGCATTTTGACCCTTGGAGAAGAAAAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000222567.6 |
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| CDS-3UTR TCA 90 bp | GTTAGTGCAGCATGTGCCAAATGTTTTGAAGAATACATAGTGGACACCATCATCATGTGCCAAATGTTTTaGAGAATACATAGTGGACAC | + |
|
Preference number: 4 (lower is better) Translates to: VSAACAKCFEEYIVDTIIMCQMF*RIHSGH Trigger: GTGTCCACTATGTATTCTTCAAAACATTTGGCACAT...GATGATGGTGTCCACTATGTATTCTTCAAAACATTTGGCACATGCTGCACTAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000222567.6 |
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| CDS-3UTR CCA 90 bp | CAAGCTACATTTCCAGGGCTCAATAGTCACATGAATCTCAATTGTAATCAAAGAGTAGAGTGCAAAACCTaGAAGAATATGAGAGCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: QATFPGLNSHMNLNCNQRVECKT*KNMRAD Trigger: GTCAGCTCTCATATTCTTCCAGGTTTTGCACTCTAC...TCTTTGATTACAATTGAGATTCATGTGACTATTGAGCCCTGGAAATGTAGCTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000222567.6 |
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| CDS-3UTR CCA 90 bp | CAAGCTACATTTCCAGGGCTCAATAGTCACATGAATCTCAATTGTAATCAAAGAAAGTTTATGCGAAGGTaGTGCCTGAGGTCTTTTACA | + |
|
Preference number: 4 (lower is better) Translates to: QATFPGLNSHMNLNCNQRKFMRR*CLRSFT Trigger: TGTAAAAGACCTCAGGCACCACCTTCGCATAAACTT...TCTTTGATTACAATTGAGATTCATGTGACTATTGAGCCCTGGAAATGTAGCTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000222567.6 |
||
| 3UTR CAA 72 bp | TCTGGTATGTATTTTATACTGACAGCACATCTCAATTaGGACAAGCTACATTTCCAGGGCTCAATAGTCACA | + |
|
Preference number: 4 (lower is better) Translates to: SGMYFILTAHLN*DKLHFQGSIVT Trigger: TGTGACTATTGAGCCCTGGAAATGTAGCTTGTCCAAATTGAGATGTGCTGTCAGTATAAAATACATACCAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000222567.6 |
||
| CDS-3UTR TCA 90 bp | CAAGCTACATTTCCAGGGCTCAATAGTCACATGAATCTCAATTGTAATCAAAGAACAAATGGCCAGATCTaGCTTTTCAAAACTACTCAC | + |
|
Preference number: 4 (lower is better) Translates to: QATFPGLNSHMNLNCNQRTNGQI*LFKTTH Trigger: GTGAGTAGTTTTGAAAAGTCAGATCTGGCCATTTGT...TCTTTGATTACAATTGAGATTCATGTGACTATTGAGCCCTGGAAATGTAGCTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000222567.6 |
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| CDS-3UTR CCA 90 bp | GTTAGTGCAGCATGTGCCAAATGTTTTGAAGAATACATAGTGGACACCATCATCACTAAACAGCCAATGTaGCTAGAAGACACTTTATTA | + |
|
Preference number: 4 (lower is better) Translates to: VSAACAKCFEEYIVDTIITKQPM*LEDTLL Trigger: TAATAAAGTGTCTTCTAGCCACATTGGCTGTTTAGT...GATGATGGTGTCCACTATGTATTCTTCAAAACATTTGGCACATGCTGCACTAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000222567.6 |
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| CDS-3UTR CCA 90 bp | GTTTTTCTTCTCCAAGGGTCAAAATGCTGCTCTTCCAACAACAAGCTTAAACACGTTATACAAAGTAGATaGTCAAGTGTGTGGAAAATG | + |
|
Preference number: 4 (lower is better) Translates to: VFLLQGSKCCSSNNKLKHVIQSR*SSVWKM Trigger: CATTTTCCACACACTTGACCATCTACTTTGTATAAC...GTGTTTAAGCTTGTTGTTGGAAGAGCAGCATTTTGACCCTTGGAGAAGAAAAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000222567.6 |
||
| CDS-3UTR CCA 90 bp | CAAGCTACATTTCCAGGGCTCAATAGTCACATGAATCTCAATTGTAATCAAAGAACAAAAATGCTGACATaGGAGTTCAACCATTCATGC | + |
|
Preference number: 4 (lower is better) Translates to: QATFPGLNSHMNLNCNQRTKMLT*EFNHSC Trigger: GCATGAATGGTTGAACTCCCATGTCAGCATTTTTGT...TCTTTGATTACAATTGAGATTCATGTGACTATTGAGCCCTGGAAATGTAGCTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000222567.6 |
||
| CDS-3UTR CCA 90 bp | GTTTTTCTTCTCCAAGGGTCAAAATGCTGCTCTTCCAACAACAAGCTTAAACACTCTTTCTTGTGTCTATaGAAAAGGGGTTTAGAATTG | + |
|
Preference number: 4 (lower is better) Translates to: VFLLQGSKCCSSNNKLKHSFLCL*KRGLEL Trigger: CAATTCTAAACCCCTTTTCCATAGACACAAGAAAGA...GTGTTTAAGCTTGTTGTTGGAAGAGCAGCATTTTGACCCTTGGAGAAGAAAAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000222567.6 |
||
| CDS-3UTR TCA 90 bp | CAAGCTACATTTCCAGGGCTCAATAGTCACATGAATCTCAATTGTAATCAAAGACAAGTGTGTGGAAAATaGATAAATATGGCCATGCAT | + |
|
Preference number: 4 (lower is better) Translates to: QATFPGLNSHMNLNCNQRQVCGK*INMAMH Trigger: ATGCATGGCCATATTTATTCATTTTCCACACACTTG...TCTTTGATTACAATTGAGATTCATGTGACTATTGAGCCCTGGAAATGTAGCTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000222567.6 |
||
| CDS-3UTR TCA 90 bp | CAAGCTACATTTCCAGGGCTCAATAGTCACATGAATCTCAATTGTAATCAAAGAGCTATAGGGTTTGTATaGGCAAATTCCAAGATAGAA | + |
|
Preference number: 4 (lower is better) Translates to: QATFPGLNSHMNLNCNQRAIGFV*ANSKIE Trigger: TTCTATCTTGGAATTTGCTCATACAAACCCTATAGC...TCTTTGATTACAATTGAGATTCATGTGACTATTGAGCCCTGGAAATGTAGCTTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222567.6 |
||
| CDS TCA 90 bp | GGGCGACAGCGCGATGTGCCTTTGGTGCGGCCCGGCCACCAGGCATaGGTAGCGACTGTTCACCAGCGCACAAGCAGCGGCATAAGTCGG | + |
|
Preference number: 5 (lower is better) Translates to: GRQRDVPLVRPGHQA*VATVHQRTSSGISR Trigger: CCGACTTATGCCGCTGCTTGTGCGCTGGTGAACAGTCGCTACTCATGCCTGGTGGCCGGGCCGCACCAAAGGCACATCGCGCTGTCGCCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222567.6 |
||
| CDS-3UTR CAA 90 bp | GTTAGTGCAGCATGTGCCAAATGTTTTGAAGAATACATAGTGGACACCATCATCCAGCGCGATGTGCCTTaGGTGCGGCCCGGCCACCAG | + |
|
Preference number: 5 (lower is better) Translates to: VSAACAKCFEEYIVDTIIQRDVP*VRPGHQ Trigger: CTGGTGGCCGGGCCGCACCAAAGGCACATCGCGCTG...GATGATGGTGTCCACTATGTATTCTTCAAAACATTTGGCACATGCTGCACTAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000222567.6 |
||
| CDS-3UTR CAA 90 bp | AGTGAGGTGTCTTGCACAGTGAAATGGGTGAATGATAGGAACTGGAGAGAGGGTGGGCTGACTCTTCCATaGGAGTGTCATCTGCATCAT | + |
|
Preference number: 5 (lower is better) Translates to: SEVSCTVKWVNDRNWREGGLTLP*ECHLHH Trigger: ATGATGCAGATGACACTCCAATGGAAGAGTCAGCCC...ACCCTCTCTCCAGTTCCTATCATTCACCCATTTCACTGTGCAAGACACCTCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222567.6 |
||
| CDS-3UTR CAA 90 bp | GTTTTTCTTCTCCAAGGGTCAAAATGCTGCTCTTCCAACAACAAGCTTAAACACCTACATCTATCTTGTTaGCCATTGTATCCCTGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: VFLLQGSKCCSSNNKLKHLHLSC*PLYPWA Trigger: GGCCCAGGGATACAATGGCAAACAAGATAGATGTAG...GTGTTTAAGCTTGTTGTTGGAAGAGCAGCATTTTGACCCTTGGAGAAGAAAAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000222567.6 |
||
| CDS-3UTR CAA 90 bp | AACTGGAGAGAGGGTAAGGGATCTAGTCTAGGCTATAGGGTTTGTATGAGCAAAACAGCACATCTCAATTaGGACAAGCTACATTTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: NWREGKGSSLGYRVCMSKTAHLN*DKLHFQ Trigger: CTGGAAATGTAGCTTGTCCAAATTGAGATGTGCTGT...TTTGCTCATACAAACCCTATAGCCTAGACTAGATCCCTTACCCTCTCTCCAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000222567.6 |
||
| CDS-3UTR CAA 90 bp | AGTGAGGTGTCTTGCACAGTGAAATGGGTGAATGATAGGAACTGGAGAGAGGGTTGGGAACTTGCTTATTaGCTAAGCCACAATGTATTT | + |
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Preference number: 5 (lower is better) Translates to: SEVSCTVKWVNDRNWREGWELAY*LSHNVF Trigger: AAATACATTGTGGCTTAGCAAATAAGCAAGTTCCCA...ACCCTCTCTCCAGTTCCTATCATTCACCCATTTCACTGTGCAAGACACCTCACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222567.6 |
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| CDS-3UTR CAA 90 bp | GTTTTTCTTCTCCAAGGGTCAAAATGCTGCTCTTCCAACAACAAGCTTAAACACGGAACTACATCTATCTaGTTTGCCATTGTATCCCTG | + |
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Preference number: 5 (lower is better) Translates to: VFLLQGSKCCSSNNKLKHGTTSI*FAIVSL Trigger: CAGGGATACAATGGCAAACAAGATAGATGTAGTTCC...GTGTTTAAGCTTGTTGTTGGAAGAGCAGCATTTTGACCCTTGGAGAAGAAAAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000222567.6 |
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| CDS-3UTR CAA 90 bp | GTTAGTGCAGCATGTGCCAAATGTTTTGAAGAATACATAGTGGACACCATCATCCATGCACATTTAGCCTaGTCTGGAAAAAGTTTATGC | + |
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Preference number: 5 (lower is better) Translates to: VSAACAKCFEEYIVDTIIHAHLA*SGKSLC Trigger: GCATAAACTTTTTCCAGACAAGGCTAAATGTGCATG...GATGATGGTGTCCACTATGTATTCTTCAAAACATTTGGCACATGCTGCACTAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000222567.6 |
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| CDS-3UTR CAA 90 bp | GTTAGTGCAGCATGTGCCAAATGTTTTGAAGAATACATAGTGGACACCATCATCAGCTCTCCCACAACTTaGATGTTATCATATGCAATA | + |
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Preference number: 5 (lower is better) Translates to: VSAACAKCFEEYIVDTIISSPTT*MLSYAI Trigger: TATTGCATATGATAACATCAAAGTTGTGGGAGAGCT...GATGATGGTGTCCACTATGTATTCTTCAAAACATTTGGCACATGCTGCACTAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000222567.6 |
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| CDS-3UTR CAA 90 bp | CAAGCTACATTTCCAGGGCTCAATAGTCACATGAATCTCAATTGTAATCAAAGATTAGGAATGGAGGCATaGAAACACCCATGTACTAAA | + |
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Preference number: 5 (lower is better) Translates to: QATFPGLNSHMNLNCNQRLGMEA*KHPCTK Trigger: TTTAGTACATGGGTGTTTCAATGCCTCCATTCCTAA...TCTTTGATTACAATTGAGATTCATGTGACTATTGAGCCCTGGAAATGTAGCTTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222567.6 |
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| CDS TCA 72 bp | CGCGATGTGCCTTTGGTGCGGCCCGGCCACCAGGCATaGGTAGCGACTGTTCACCAGCGCACAAGCAGCGGC | + |
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Preference number: 6 (lower is better) Translates to: RDVPLVRPGHQA*VATVHQRTSSG Trigger: GCCGCTGCTTGTGCGCTGGTGAACAGTCGCTACTCATGCCTGGTGGCCGGGCCGCACCAAAGGCACATCGCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222567.6 |
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| CDS TCA 72 bp | CCAGATGCCATTCGCATTATTAGTATTCTGCAGGGCTaGCTCTTCCATTGGAGTGTCATCTGCATCATCTGC | + |
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Preference number: 6 (lower is better) Translates to: PDAIRIISILQG*LFHWSVICIIC Trigger: GCAGATGATGCAGATGACACTCCAATGGAAGAGTCAGCCCTGCAGAATACTAATAATGCGAATGGCATCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222567.6 |
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| CDS CAA 72 bp | CTTCCATTGGAGTGTCATCTGCATCATCTGCTAGCTTaGTGGTACCACTGTCCACTTCATATGTCTCTGGGT | + |
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Preference number: 6 (lower is better) Translates to: LPLECHLHHLLA*WYHCPLHMSLG Trigger: ACCCAGAGACATATGAAGTGGACAGTGGTACCACAAAGCTAGCAGATGATGCAGATGACACTCCAATGGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222567.6 |
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