Pregenerated sensors for PNRC1 (Homo sapiens)
Ensembl gene IDs: ENSG00000146278Ensembl transcript IDs: ENST00000336032.4, ENST00000354922.3, ENST00000369472.1
Found 84 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | AGCTCAATTGCAATCTCCACTTCTCAGGCTCAAGAGATGCTCCCGTCTCAGCCTTCACACATTCAAACATaGGAAACAGTCACACACAAA | + |
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Preference number: 2 (lower is better) Translates to: SSIAISTSQAQEMLPSQPSHIQT*ETVTHK Trigger: TTTGTGTGTGACTGTTTCTCATGTTTGAATGTGTGA...AGGCTGAGACGGGAGCATCTCTTGAGCCTGAGAAGTGGAGATTGCAATTGAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000336032.4 |
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| 3UTR-3UTR CAA 90 bp | AGCTCAATTGCAATCTCCACTTCTCAGGCTCAAGAGATGCTCCCGTCTCAGCCTACTCATCTTTTGCAATaGTATGTTGCAACAAGGCAA | + |
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Preference number: 3 (lower is better) Translates to: SSIAISTSQAQEMLPSQPTHLLQ*YVATRQ Trigger: TTGCCTTGTTGCAACATACAATTGCAAAAGATGAGT...AGGCTGAGACGGGAGCATCTCTTGAGCCTGAGAAGTGGAGATTGCAATTGAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000336032.4 |
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| CDS-3UTR GCA 90 bp | AGCTCAATTGCAATCTCCACTTCTCAGGCTCAAGAGATGCTCCCGTCTCAGCCTCGTGCCGGCTGCGGCTaGAGGACTCGGGGCCAAGGC | + |
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Preference number: 4 (lower is better) Translates to: SSIAISTSQAQEMLPSQPRAGCG*RTRGQG Trigger: GCCTTGGCCCCGAGTCCTGCAGCCGCAGCCGGCACG...AGGCTGAGACGGGAGCATCTCTTGAGCCTGAGAAGTGGAGATTGCAATTGAGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000336032.4 |
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| CDS-3UTR GCA 90 bp | GGCTCAAGAGATGCTCCCGTCTCAGCCTCTAGAGTAGTCAAGTACTATGCTCAATCCCTCCGTGCCGGCTaGGGCTGCAGGACTCGGGGC | + |
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Preference number: 4 (lower is better) Translates to: GSRDAPVSASRVVKYYAQSLRAG*GCRTRG Trigger: GCCCCGAGTCCTGCAGCCGCAGCCGGCACGGAGGGA...TTGAGCATAGTACTTGACTACTCTAGAGGCTGAGACGGGAGCATCTCTTGAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000336032.4 |
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| CDS-3UTR GCA 90 bp | AGCTCAATTGCAATCTCCACTTCTCAGGCTCAAGAGATGCTCCCGTCTCAGCCTACGAGCGGCTCCCGCTaGGGGACGGAGACGACAGTC | + |
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Preference number: 4 (lower is better) Translates to: SSIAISTSQAQEMLPSQPTSGSR*GTETTV Trigger: GACTGTCGTCTCCGTCCCGCAGCGGGAGCCGCTCGT...AGGCTGAGACGGGAGCATCTCTTGAGCCTGAGAAGTGGAGATTGCAATTGAGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000336032.4 |
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| CDS-3UTR CCA 90 bp | AGCTCAATTGCAATCTCCACTTCTCAGGCTCAAGAGATGCTCCCGTCTCAGCCTGCTGCCCTGCGGGGCTaGCCCGCACCTTCTTCTTTC | + |
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Preference number: 4 (lower is better) Translates to: SSIAISTSQAQEMLPSQPAALRG*PAPSSF Trigger: GAAAGAAGAAGGTGCGGGCCAGCCCCGCAGGGCAGC...AGGCTGAGACGGGAGCATCTCTTGAGCCTGAGAAGTGGAGATTGCAATTGAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000336032.4 |
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| CDS-3UTR CCA 90 bp | CCTGATCCTAGCTCAATTGCAATCTCCACTTCTCAGGCTCAAGAGATGCTCCCGCTCGGCCGGTGCTGCTaGTACTGGTGGAAGCGGCTG | + |
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Preference number: 4 (lower is better) Translates to: PDPSSIAISTSQAQEMLPLGRCC*YWWKRL Trigger: CAGCCGCTTCCACCAGTACCAGCAGCACCGGCCGAG...CGGGAGCATCTCTTGAGCCTGAGAAGTGGAGATTGCAATTGAGCTAGGATCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000336032.4 |
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| CDS-3UTR GCA 90 bp | AGCTCAATTGCAATCTCCACTTCTCAGGCTCAAGAGATGCTCCCGTCTCAGCCTAGACTCGGCCGGTGCTaGTGGTACTGGTGGAAGCGG | + |
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Preference number: 4 (lower is better) Translates to: SSIAISTSQAQEMLPSQPRLGRC*WYWWKR Trigger: CCGCTTCCACCAGTACCAGCAGCACCGGCCGAGTCT...AGGCTGAGACGGGAGCATCTCTTGAGCCTGAGAAGTGGAGATTGCAATTGAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000336032.4 |
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| CDS-3UTR CCA 90 bp | GGCTCAAGAGATGCTCCCGTCTCAGCCTCTAGAGTAGTCAAGTACTATGCTCAATGCTGCTGGTACTGGTaGAAGCGGCTGGGCAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: GSRDAPVSASRVVKYYAQCCWYW*KRLGSC Trigger: GCAGCTGCCCAGCCGCTTCCACCAGTACCAGCAGCA...TTGAGCATAGTACTTGACTACTCTAGAGGCTGAGACGGGAGCATCTCTTGAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000336032.4 |
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| CDS-3UTR CCA 90 bp | GGCTCAAGAGATGCTCCCGTCTCAGCCTCTAGAGTAGTCAAGTACTATGCTCAAATAGGGTGGCGGCGATaGATGCTGCTAGGAGAGCCT | + |
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Preference number: 4 (lower is better) Translates to: GSRDAPVSASRVVKYYAQIGWRR*MLLGEP Trigger: AGGCTCTCCTAGCAGCATCCATCGCCGCCACCCTAT...TTGAGCATAGTACTTGACTACTCTAGAGGCTGAGACGGGAGCATCTCTTGAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000336032.4 |
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| CDS-3UTR CCA 90 bp | AGCTCAATTGCAATCTCCACTTCTCAGGCTCAAGAGATGCTCCCGTCTCAGCCTCCAGTGAAGATAGGGTaGCGGCGATGGATGCTGCTA | + |
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Preference number: 4 (lower is better) Translates to: SSIAISTSQAQEMLPSQPPVKIG*RRWMLL Trigger: TAGCAGCATCCATCGCCGCCACCCTATCTTCACTGG...AGGCTGAGACGGGAGCATCTCTTGAGCCTGAGAAGTGGAGATTGCAATTGAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000336032.4 |
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| CDS-3UTR CCA 90 bp | GTATGTTGCAACAAGGCAAATTTCCATTTCTGTACCAATTTTCTCAAGAGTCCAGGGCAAGGTCGGGGCTaGCTCCCTCCGTGCCGGCTG | + |
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Preference number: 4 (lower is better) Translates to: VCCNKANFHFCTNFLKSPGQGRG*LPPCRL Trigger: CAGCCGGCACGGAGGGAGCCAGCCCCGACCTTGCCC...TGGACTCTTGAGAAAATTGGTACAGAAATGGAAATTTGCCTTGTTGCAACATAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000336032.4 |
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| CDS-3UTR GCA 90 bp | GTATGTTGCAACAAGGCAAATTTCCATTTCTGTACCAATTTTCTCAAGAGTCCAGCGGTTGGGCAGAGCTaGTGGAGCGCGAGGCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: VCCNKANFHFCTNFLKSPAVGQS*WSARLG Trigger: CCCCAGCCTCGCGCTCCAGCAGCTCTGCCCAACCGC...TGGACTCTTGAGAAAATTGGTACAGAAATGGAAATTTGCCTTGTTGCAACATAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000336032.4 |
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| CDS-3UTR GCA 90 bp | GCAATTGTATGTTGCAACAAGGCAAATTTCCATTTCTGTACCAATTTTCTCAAGGGCTGGCTCCCTCCGTaGCGGCTGCGGCTGCAGGAC | + |
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Preference number: 4 (lower is better) Translates to: AIVCCNKANFHFCTNFLKGWLPP*RLRLQD Trigger: GTCCTGCAGCCGCAGCCGGCACGGAGGGAGCCAGCC...CTTGAGAAAATTGGTACAGAAATGGAAATTTGCCTTGTTGCAACATACAATTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000336032.4 |
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| CDS-3UTR CCA 90 bp | TGTATGTTGCAACAAGGCAAATTTCCATTTCTGTACCAATTTTCTCAAGAGTCCGCTGGAGCGCGAGGCTaGGGGGTCAGACACGGGCCA | + |
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Preference number: 4 (lower is better) Translates to: CMLQQGKFPFLYQFSQESAGARG*GVRHGP Trigger: TGGCCCGTGTCTGACCCCCCAGCCTCGCGCTCCAGC...GGACTCTTGAGAAAATTGGTACAGAAATGGAAATTTGCCTTGTTGCAACATACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000336032.4 |
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| CDS-3UTR TCA 90 bp | GTATGTTGCAACAAGGCAAATTTCCATTTCTGTACCAATTTTCTCAAGAGTCCAGAAGATCGCGGAACATaGCTCGGGCGGTGGCGGCGC | + |
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Preference number: 4 (lower is better) Translates to: VCCNKANFHFCTNFLKSPEDRGT*LGRWRR Trigger: GCGCCGCCACCGCCCGAGTCATGTTCCGCGATCTTC...TGGACTCTTGAGAAAATTGGTACAGAAATGGAAATTTGCCTTGTTGCAACATAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000336032.4 ENST00000369472.1 |
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| CDS-3UTR GCA 90 bp | TGTATGTTGCAACAAGGCAAATTTCCATTTCTGTACCAATTTTCTCAAGAGTCCACGAGCGGCTCCCGCTaGGGGACGGAGACGACAGTC | + |
|
Preference number: 4 (lower is better) Translates to: CMLQQGKFPFLYQFSQESTSGSR*GTETTV Trigger: GACTGTCGTCTCCGTCCCGCAGCGGGAGCCGCTCGT...GGACTCTTGAGAAAATTGGTACAGAAATGGAAATTTGCCTTGTTGCAACATACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000336032.4 ENST00000369472.1 |
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| CDS-3UTR GCA 90 bp | TTGTATGTTGCAACAAGGCAAATTTCCATTTCTGTACCAATTTTCTCAAGAGTCCCGCTTCTTCGGCGCTaGCCGAGGAGTGCCTCCCGC | + |
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Preference number: 4 (lower is better) Translates to: LYVATRQISISVPIFSRVPLLRR*PRSASR Trigger: GCGGGAGGCACTCCTCGGGCAGCGCCGAAGAAGCGG...GACTCTTGAGAAAATTGGTACAGAAATGGAAATTTGCCTTGTTGCAACATACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000336032.4 |
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| CDS-3UTR CCA 90 bp | GTATGTTGCAACAAGGCAAATTTCCATTTCTGTACCAATTTTCTCAAGAGTCCAAAGGAGGCGGAGCCGTaGTCACCATCGGGAGGGCCC | + |
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Preference number: 4 (lower is better) Translates to: VCCNKANFHFCTNFLKSPKEAEP*SPSGGP Trigger: GGGCCCTCCCGATGGTGACCACGGCTCCGCCTCCTT...TGGACTCTTGAGAAAATTGGTACAGAAATGGAAATTTGCCTTGTTGCAACATAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000336032.4 |
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| CDS-3UTR TCA 90 bp | GCAATTGTATGTTGCAACAAGGCAAATTTCCATTTCTGTACCAATTTTCTCAAGGAAGATCGCGGAACATaGCTCGGGCGGTGGCGGCGC | + |
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Preference number: 4 (lower is better) Translates to: AIVCCNKANFHFCTNFLKEDRGT*LGRWRR Trigger: GCGCCGCCACCGCCCGAGTCATGTTCCGCGATCTTC...CTTGAGAAAATTGGTACAGAAATGGAAATTTGCCTTGTTGCAACATACAATTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000336032.4 ENST00000369472.1 |
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| CDS-3UTR CCA 90 bp | TTGTATGTTGCAACAAGGCAAATTTCCATTTCTGTACCAATTTTCTCAAGAGTCCGGTGCTGCTGGTACTaGTGGAAGCGGCTGGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LYVATRQISISVPIFSRVRCCWY*WKRLGS Trigger: GCTGCCCAGCCGCTTCCACCAGTACCAGCAGCACCG...GACTCTTGAGAAAATTGGTACAGAAATGGAAATTTGCCTTGTTGCAACATACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000336032.4 |
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| CDS-3UTR GCA 90 bp | TTGTATGTTGCAACAAGGCAAATTTCCATTTCTGTACCAATTTTCTCAAGAGTCTCCAGACTCGGCCGGTaGTGCTGGTACTGGTGGAAG | + |
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Preference number: 4 (lower is better) Translates to: LYVATRQISISVPIFSRVSRLGR*CWYWWK Trigger: CTTCCACCAGTACCAGCAGCACCGGCCGAGTCTGGA...GACTCTTGAGAAAATTGGTACAGAAATGGAAATTTGCCTTGTTGCAACATACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000336032.4 |
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| CDS-3UTR CCA 90 bp | GTATGTTGCAACAAGGCAAATTTCCATTTCTGTACCAATTTTCTCAAGAGTCCAATAGGGTGGCGGCGATaGATGCTGCTAGGAGAGCCT | + |
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Preference number: 4 (lower is better) Translates to: VCCNKANFHFCTNFLKSPIGWRR*MLLGEP Trigger: AGGCTCTCCTAGCAGCATCCATCGCCGCCACCCTAT...TGGACTCTTGAGAAAATTGGTACAGAAATGGAAATTTGCCTTGTTGCAACATAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000336032.4 ENST00000369472.1 |
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| CDS-3UTR CCA 90 bp | AGCTCAATTGCAATCTCCACTTCTCAGGCTCAAGAGATGCTCCCGTCTCAGCCTGGCATTAAGCTGGAATaGATATATACCAAAACCAGA | + |
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Preference number: 4 (lower is better) Translates to: SSIAISTSQAQEMLPSQPGIKLE*IYTKTR Trigger: TCTGGTTTTGGTATATATCCATTCCAGCTTAATGCC...AGGCTGAGACGGGAGCATCTCTTGAGCCTGAGAAGTGGAGATTGCAATTGAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000336032.4 |
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| CDS-3UTR GCA 90 bp | AGCTCAATTGCAATCTCCACTTCTCAGGCTCAAGAGATGCTCCCGTCTCAGCCTCTGTTTATCTTTGGTTaGTCATACAAGTGTATACCA | + |
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Preference number: 4 (lower is better) Translates to: SSIAISTSQAQEMLPSQPLFIFG*SYKCIP Trigger: TGGTATACACTTGTATGAGCAACCAAAGATAAACAG...AGGCTGAGACGGGAGCATCTCTTGAGCCTGAGAAGTGGAGATTGCAATTGAGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000336032.4 |
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| CDS-3UTR TCA 90 bp | GTATGTTGCAACAAGGCAAATTTCCATTTCTGTACCAATTTTCTCAAGAGTCCAGTGCTTCCCATCCAGTaGCTAGGAGGCTTTGGAAGA | + |
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Preference number: 4 (lower is better) Translates to: VCCNKANFHFCTNFLKSPVLPIQ*LGGFGR Trigger: TCTTCCAAAGCCTCCTAGTCACTGGATGGGAAGCAC...TGGACTCTTGAGAAAATTGGTACAGAAATGGAAATTTGCCTTGTTGCAACATAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000336032.4 ENST00000369472.1 |
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| CDS-3UTR GCA 90 bp | GCAATTGTATGTTGCAACAAGGCAAATTTCCATTTCTGTACCAATTTTCTCAAGTTACCCAGGCTGGAGTaGAGTGGCCTGATCCTAGCT | + |
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Preference number: 4 (lower is better) Translates to: AIVCCNKANFHFCTNFLKLPRLE*SGLILA Trigger: AGCTAGGATCAGGCCACTGCACTCCAGCCTGGGTAA...CTTGAGAAAATTGGTACAGAAATGGAAATTTGCCTTGTTGCAACATACAATTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000336032.4 |
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| CDS-3UTR CCA 90 bp | TTGTATGTTGCAACAAGGCAAATTTCCATTTCTGTACCAATTTTCTCAAGAGTCCCAGTGAAGATAGGGTaGCGGCGATGGATGCTGCTA | + |
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Preference number: 4 (lower is better) Translates to: LYVATRQISISVPIFSRVPVKIG*RRWMLL Trigger: TAGCAGCATCCATCGCCGCCACCCTATCTTCACTGG...GACTCTTGAGAAAATTGGTACAGAAATGGAAATTTGCCTTGTTGCAACATACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000336032.4 ENST00000369472.1 |
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| CDS-3UTR TCA 90 bp | TTGTATGTTGCAACAAGGCAAATTTCCATTTCTGTACCAATTTTCTCAAGAGTCGTGCTTCCCATCCAGTaGCTAGGAGGCTTTGGAAGA | + |
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Preference number: 4 (lower is better) Translates to: LYVATRQISISVPIFSRVVLPIQ*LGGFGR Trigger: TCTTCCAAAGCCTCCTAGTCACTGGATGGGAAGCAC...GACTCTTGAGAAAATTGGTACAGAAATGGAAATTTGCCTTGTTGCAACATACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000336032.4 ENST00000369472.1 |
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| CDS-3UTR TCA 90 bp | TGTATGTTGCAACAAGGCAAATTTCCATTTCTGTACCAATTTTCTCAAGAGTCCTACAAGTGTATACCATaGACAAGCTGGCCATGGGGA | + |
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Preference number: 4 (lower is better) Translates to: CMLQQGKFPFLYQFSQESYKCIP*TSWPWG Trigger: TCCCCATGGCCAGCTTGTTCATGGTATACACTTGTA...GGACTCTTGAGAAAATTGGTACAGAAATGGAAATTTGCCTTGTTGCAACATACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000336032.4 ENST00000369472.1 |
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| CDS-3UTR TCA 90 bp | TTGTATGTTGCAACAAGGCAAATTTCCATTTCTGTACCAATTTTCTCAAGAGTCTACAAGTGTATACCATaGACAAGCTGGCCATGGGGA | + |
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Preference number: 4 (lower is better) Translates to: LYVATRQISISVPIFSRVYKCIP*TSWPWG Trigger: TCCCCATGGCCAGCTTGTTCATGGTATACACTTGTA...GACTCTTGAGAAAATTGGTACAGAAATGGAAATTTGCCTTGTTGCAACATACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000336032.4 ENST00000369472.1 |
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| CDS-3UTR CCA 90 bp | GCAATTGTATGTTGCAACAAGGCAAATTTCCATTTCTGTACCAATTTTCTCAAGGTGACTAGGAGGCTTTaGAAGAACACTAGGAGAAGG | + |
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Preference number: 4 (lower is better) Translates to: AIVCCNKANFHFCTNFLKVTRRL*KNTRRR Trigger: CCTTCTCCTAGTGTTCTTCCAAAGCCTCCTAGTCAC...CTTGAGAAAATTGGTACAGAAATGGAAATTTGCCTTGTTGCAACATACAATTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000336032.4 ENST00000369472.1 |
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| CDS-3UTR CCA 90 bp | TTGTATGTTGCAACAAGGCAAATTTCCATTTCTGTACCAATTTTCTCAAGAGTCGTGACTAGGAGGCTTTaGAAGAACACTAGGAGAAGG | + |
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Preference number: 4 (lower is better) Translates to: LYVATRQISISVPIFSRVVTRRL*KNTRRR Trigger: CCTTCTCCTAGTGTTCTTCCAAAGCCTCCTAGTCAC...GACTCTTGAGAAAATTGGTACAGAAATGGAAATTTGCCTTGTTGCAACATACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000336032.4 ENST00000369472.1 |
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| CDS-3UTR CCA 90 bp | GTATGTTGCAACAAGGCAAATTTCCATTTCTGTACCAATTTTCTCAAGAGTCCAGCTCCCTGTTTTGGTTaGAATTTTCAACAGTGCTTC | + |
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Preference number: 4 (lower is better) Translates to: VCCNKANFHFCTNFLKSPAPCFG*NFQQCF Trigger: GAAGCACTGTTGAAAATTCCAACCAAAACAGGGAGC...TGGACTCTTGAGAAAATTGGTACAGAAATGGAAATTTGCCTTGTTGCAACATAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000336032.4 ENST00000369472.1 |
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| CDS-3UTR TCA 90 bp | TGTATGTTGCAACAAGGCAAATTTCCATTTCTGTACCAATTTTCTCAAGAGTCCCTGAATTCTGTCAGATaGAACAGAATCCTGCCAAAA | + |
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Preference number: 4 (lower is better) Translates to: CMLQQGKFPFLYQFSQESLNSVR*NRILPK Trigger: TTTTGGCAGGATTCTGTTTCATCTGACAGAATTCAG...GGACTCTTGAGAAAATTGGTACAGAAATGGAAATTTGCCTTGTTGCAACATACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000336032.4 ENST00000369472.1 |
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| CDS-3UTR CCA 90 bp | GCAATTGTATGTTGCAACAAGGCAAATTTCCATTTCTGTACCAATTTTCTCAAGGCTCCCTGTTTTGGTTaGAATTTTCAACAGTGCTTC | + |
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Preference number: 4 (lower is better) Translates to: AIVCCNKANFHFCTNFLKAPCFG*NFQQCF Trigger: GAAGCACTGTTGAAAATTCCAACCAAAACAGGGAGC...CTTGAGAAAATTGGTACAGAAATGGAAATTTGCCTTGTTGCAACATACAATTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000336032.4 ENST00000369472.1 |
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| CDS-3UTR CCA 90 bp | TGTATGTTGCAACAAGGCAAATTTCCATTTCTGTACCAATTTTCTCAAGAGTCCATCAGCTCCCTGTTTTaGTTGGAATTTTCAACAGTG | + |
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Preference number: 4 (lower is better) Translates to: CMLQQGKFPFLYQFSQESISSLF*LEFSTV Trigger: CACTGTTGAAAATTCCAACCAAAACAGGGAGCTGAT...GGACTCTTGAGAAAATTGGTACAGAAATGGAAATTTGCCTTGTTGCAACATACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000336032.4 ENST00000369472.1 |
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| CDS-3UTR CCA 90 bp | TTGTATGTTGCAACAAGGCAAATTTCCATTTCTGTACCAATTTTCTCAAGAGTCATCAGCTCCCTGTTTTaGTTGGAATTTTCAACAGTG | + |
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Preference number: 4 (lower is better) Translates to: LYVATRQISISVPIFSRVISSLF*LEFSTV Trigger: CACTGTTGAAAATTCCAACCAAAACAGGGAGCTGAT...GACTCTTGAGAAAATTGGTACAGAAATGGAAATTTGCCTTGTTGCAACATACAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000336032.4 ENST00000369472.1 |
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| CDS-3UTR TCA 90 bp | TTGTATGTTGCAACAAGGCAAATTTCCATTTCTGTACCAATTTTCTCAAGAGTCTCACACATTCAAACATaGGAAACAGTCACACACAAA | + |
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Preference number: 4 (lower is better) Translates to: LYVATRQISISVPIFSRVSHIQT*ETVTHK Trigger: TTTGTGTGTGACTGTTTCTCATGTTTGAATGTGTGA...GACTCTTGAGAAAATTGGTACAGAAATGGAAATTTGCCTTGTTGCAACATACAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000336032.4 |
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| CDS-3UTR GCA 90 bp | TGTATGTTGCAACAAGGCAAATTTCCATTTCTGTACCAATTTTCTCAAGAGTCCCTGTTTATCTTTGGTTaGTCATACAAGTGTATACCA | + |
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Preference number: 4 (lower is better) Translates to: CMLQQGKFPFLYQFSQESLFIFG*SYKCIP Trigger: TGGTATACACTTGTATGAGCAACCAAAGATAAACAG...GGACTCTTGAGAAAATTGGTACAGAAATGGAAATTTGCCTTGTTGCAACATACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000336032.4 ENST00000369472.1 |
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| CDS-3UTR GCA 90 bp | GCAATTGTATGTTGCAACAAGGCAAATTTCCATTTCTGTACCAATTTTCTCAAGTGGATCACTAAACTTTaGCCCAGCATAATTTTCCTT | + |
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Preference number: 4 (lower is better) Translates to: AIVCCNKANFHFCTNFLKWITKL*PSIIFL Trigger: AAGGAAAATTATGCTGGGGCAAAGTTTAGTGATCCA...CTTGAGAAAATTGGTACAGAAATGGAAATTTGCCTTGTTGCAACATACAATTGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000336032.4 ENST00000369472.1 |
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| CDS-3UTR GCA 90 bp | TTGTATGTTGCAACAAGGCAAATTTCCATTTCTGTACCAATTTTCTCAAGAGTCTGGATCACTAAACTTTaGCCCAGCATAATTTTCCTT | + |
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Preference number: 4 (lower is better) Translates to: LYVATRQISISVPIFSRVWITKL*PSIIFL Trigger: AAGGAAAATTATGCTGGGGCAAAGTTTAGTGATCCA...GACTCTTGAGAAAATTGGTACAGAAATGGAAATTTGCCTTGTTGCAACATACAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000336032.4 ENST00000369472.1 |
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| CDS-3UTR GCA 90 bp | GCAATTGTATGTTGCAACAAGGCAAATTTCCATTTCTGTACCAATTTTCTCAAGAGTAGTCAAGTACTATaGTCAAAAACCTCAATGCTG | + |
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Preference number: 4 (lower is better) Translates to: AIVCCNKANFHFCTNFLKSSQVL*SKTSML Trigger: CAGCATTGAGGTTTTTGAGCATAGTACTTGACTACT...CTTGAGAAAATTGGTACAGAAATGGAAATTTGCCTTGTTGCAACATACAATTGC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000336032.4 |
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| CDS-3UTR CCA 90 bp | TTGTATGTTGCAACAAGGCAAATTTCCATTTCTGTACCAATTTTCTCAAGAGTCCTGTCTGTTTATCTTTaGTTGCTCATACAAGTGTAT | + |
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Preference number: 4 (lower is better) Translates to: LYVATRQISISVPIFSRVLSVYL*LLIQVY Trigger: ATACACTTGTATGAGCAACCAAAGATAAACAGACAG...GACTCTTGAGAAAATTGGTACAGAAATGGAAATTTGCCTTGTTGCAACATACAA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000336032.4 ENST00000369472.1 |
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| CDS-3UTR CCA 90 bp | GCAATTGTATGTTGCAACAAGGCAAATTTCCATTTCTGTACCAATTTTCTCAAGCTGTCTGTTTATCTTTaGTTGCTCATACAAGTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: AIVCCNKANFHFCTNFLKLSVYL*LLIQVY Trigger: ATACACTTGTATGAGCAACCAAAGATAAACAGACAG...CTTGAGAAAATTGGTACAGAAATGGAAATTTGCCTTGTTGCAACATACAATTGC 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000336032.4 ENST00000369472.1 |
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| CDS GCA 90 bp | CTCGGGCCGGTCGCGGGGCTCCGGCCGCCCTCCAGACTCGGCCGGTaGTGCTGGTACTGGTGGAAGCGGCTGGGCAGCTGCCCTGCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: LGPVAGLRPPSRLGR*CWYWWKRLGSCPAG Trigger: CCCCGCAGGGCAGCTGCCCAGCCGCTTCCACCAGTACCAGCAGCACCGGCCGAGTCTGGAGGGCGGCCGGAGCCCCGCGACCGGCCCGAG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000336032.4 |
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| CDS CCA 90 bp | GCGGGGCTCCGGCCGCCCTCCAGACTCGGCCGGTGCTGCTGGTACTaGTGGAAGCGGCTGGGCAGCTGCCCTGCGGGGCTGGCCCGCACC | + |
|
Preference number: 5 (lower is better) Translates to: AGLRPPSRLGRCCWY*WKRLGSCPAGLART Trigger: GGTGCGGGCCAGCCCCGCAGGGCAGCTGCCCAGCCGCTTCCACCAGTACCAGCAGCACCGGCCGAGTCTGGAGGGCGGCCGGAGCCCCGC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000336032.4 |
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| CDS CCA 90 bp | CCGGTCGCGGGGCTCCGGCCGCCCTCCAGACTCGGCCGGTGCTGCTaGTACTGGTGGAAGCGGCTGGGCAGCTGCCCTGCGGGGCTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: PVAGLRPPSRLGRCC*YWWKRLGSCPAGLA Trigger: GGCCAGCCCCGCAGGGCAGCTGCCCAGCCGCTTCCACCAGTACCAGCAGCACCGGCCGAGTCTGGAGGGCGGCCGGAGCCCCGCGACCGG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000336032.4 |
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| CDS CCA 90 bp | GGGCTCCGGCCGCCCTCCAGACTCGGCCGGTGCTGCTGGTACTGGTaGAAGCGGCTGGGCAGCTGCCCTGCGGGGCTGGCCCGCACCTTC | + |
|
Preference number: 5 (lower is better) Translates to: GLRPPSRLGRCCWYW*KRLGSCPAGLARTF Trigger: GAAGGTGCGGGCCAGCCCCGCAGGGCAGCTGCCCAGCCGCTTCCACCAGTACCAGCAGCACCGGCCGAGTCTGGAGGGCGGCCGGAGCCC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000336032.4 |
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| CDS GCA 90 bp | TGCGGGGCTGGCCCGCACCTTCTTCTTTCGCCGCTTCTTCGGCGCTaGCCGAGGAGTGCCTCCCGCCACGGCGAGGCTGCGGTTGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: CGAGPHLLLSPLLRR*PRSASRHGEAAVGQ Trigger: CTGCCCAACCGCAGCCTCGCCGTGGCGGGAGGCACTCCTCGGGCAGCGCCGAAGAAGCGGCGAAAGAAGAAGGTGCGGGCCAGCCCCGCA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000336032.4 |
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| CDS GCA 90 bp | CGGCCGGTGCTGCTGGTACTGGTGGAAGCGGCTGGGCAGCTGCCCTaGGGGGCTGGCCCGCACCTTCTTCTTTCGCCGCTTCTTCGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: RPVLLVLVEAAGQLP*GAGPHLLLSPLLRR Trigger: GCGCCGAAGAAGCGGCGAAAGAAGAAGGTGCGGGCCAGCCCCGCAGGGCAGCTGCCCAGCCGCTTCCACCAGTACCAGCAGCACCGGCCG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000336032.4 |
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| CDS CCA 90 bp | CGCCCTCCAGACTCGGCCGGTGCTGCTGGTACTGGTGGAAGCGGCTaGGCAGCTGCCCTGCGGGGCTGGCCCGCACCTTCTTCTTTCGCC | + |
|
Preference number: 5 (lower is better) Translates to: RPPDSAGAAGTGGSG*AAALRGWPAPSSFA Trigger: GGCGAAAGAAGAAGGTGCGGGCCAGCCCCGCAGGGCAGCTGCCCAGCCGCTTCCACCAGTACCAGCAGCACCGGCCGAGTCTGGAGGGCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000336032.4 |
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| CDS CCA 90 bp | GCTGCTGGTACTGGTGGAAGCGGCTGGGCAGCTGCCCTGCGGGGCTaGCCCGCACCTTCTTCTTTCGCCGCTTCTTCGGCGCTGCCCGAG | + |
|
Preference number: 5 (lower is better) Translates to: AAGTGGSGWAAALRG*PAPSSFAASSALPE Trigger: CTCGGGCAGCGCCGAAGAAGCGGCGAAAGAAGAAGGTGCGGGCCAGCCCCGCAGGGCAGCTGCCCAGCCGCTTCCACCAGTACCAGCAGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000336032.4 |
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| CDS GCA 90 bp | AAGCCAAGCGGCGCAAGGCGGCCACCCAGGACGAGCGGCTCCCGCTaGGGGACGGAGACGACAGTCATAGCGCTAGGAAGCTTGTCGCTC | + |
|
Preference number: 5 (lower is better) Translates to: KPSGARRPPRTSGSR*GTETTVIALGSLSL Trigger: GAGCGACAAGCTTCCTAGCGCTATGACTGTCGTCTCCGTCCCGCAGCGGGAGCCGCTCGTCCTGGGTGGCCGCCTTGCGCCGCTTGGCTT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000336032.4 ENST00000369472.1 |
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| CDS GCA 90 bp | CCACTAAGTAGGTCAGGCCCGAGGCGGGCAGAGCCCCAACTGGACTaGGCGTCCCACACCGGGCACCTCACATTTTGGCACAACTCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: PLSRSGPRRAEPQLD*ASHTGHLTFWHNSN Trigger: GTTGGAGTTGTGCCAAAATGTGAGGTGCCCGGTGTGGGACGCGCAGTCCAGTTGGGGCTCTGCCCGCCTCGGGCCTGACCTACTTAGTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000354922.3 |
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| CDS CCA 90 bp | GAGCCCCAACTGGACTGCGCGTCCCACACCGGGCACCTCACATTTTaGCACAACTCCAACCAAACGAAACCCAGCCGCTCGGAGCCCACT | + |
|
Preference number: 5 (lower is better) Translates to: EPQLDCASHTGHLTF*HNSNQTKPSRSEPT Trigger: AGTGGGCTCCGAGCGGCTGGGTTTCGTTTGGTTGGAGTTGTGCCAAAATGTGAGGTGCCCGGTGTGGGACGCGCAGTCCAGTTGGGGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000354922.3 |
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| CDS GCA 90 bp | ACGACACGAAAGAGGACCACAACTTTCCACGTCAATAAGGTTCACTaGCAGAGCTCCCTAGTTAGTACCTGTTCTAGAAAACAGGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: TTRKRTTTFHVNKVH*QSSLVSTCSRKQAR Trigger: CCTGGCCTGTTTTCTAGAACAGGTACTAACTAGGGAGCTCTGGCAGTGAACCTTATTGACGTGGAAAGTTGTGGTCCTCTTTCGTGTCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000354922.3 |
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| CDS-3UTR CAA 90 bp | GGCTCAAGAGATGCTCCCGTCTCAGCCTCTAGAGTAGTCAAGTACTATGCTCAATCTGTTTATCTTTGGTaGCTCATACAAGTGTATACC | + |
|
Preference number: 5 (lower is better) Translates to: GSRDAPVSASRVVKYYAQSVYLW*LIQVYT Trigger: GGTATACACTTGTATGAGCAACCAAAGATAAACAGA...TTGAGCATAGTACTTGACTACTCTAGAGGCTGAGACGGGAGCATCTCTTGAGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000336032.4 |
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| CDS-3UTR CAA 90 bp | TTGTATGTTGCAACAAGGCAAATTTCCATTTCTGTACCAATTTTCTCAAGAGTCATAGCGCTAGGAAGCTaGTCGCTCAGCAACGAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: LYVATRQISISVPIFSRVIALGS*SLSNEE Trigger: CTCTTCGTTGCTGAGCGACAAGCTTCCTAGCGCTAT...GACTCTTGAGAAAATTGGTACAGAAATGGAAATTTGCCTTGTTGCAACATACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000336032.4 ENST00000369472.1 |
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| CDS-3UTR CAA 90 bp | GCAATTGTATGTTGCAACAAGGCAAATTTCCATTTCTGTACCAATTTTCTCAAGATAGCGCTAGGAAGCTaGTCGCTCAGCAACGAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: AIVCCNKANFHFCTNFLKIALGS*SLSNEE Trigger: CTCTTCGTTGCTGAGCGACAAGCTTCCTAGCGCTAT...CTTGAGAAAATTGGTACAGAAATGGAAATTTGCCTTGTTGCAACATACAATTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000336032.4 ENST00000369472.1 |
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| CDS-3UTR CAA 90 bp | TGTATGTTGCAACAAGGCAAATTTCCATTTCTGTACCAATTTTCTCAAGAGTCCAGCTCCCTGTTTTGGTaGGAATTTTCAACAGTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: CMLQQGKFPFLYQFSQESSSLFW*EFSTVL Trigger: AAGCACTGTTGAAAATTCCAACCAAAACAGGGAGCT...GGACTCTTGAGAAAATTGGTACAGAAATGGAAATTTGCCTTGTTGCAACATACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000336032.4 ENST00000369472.1 |
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| CDS-3UTR CAA 90 bp | GTATGTTGCAACAAGGCAAATTTCCATTTCTGTACCAATTTTCTCAAGAGTCCAAGCTCCCTGTTTTGGTaGGAATTTTCAACAGTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: VCCNKANFHFCTNFLKSPSSLFW*EFSTVL Trigger: AAGCACTGTTGAAAATTCCAACCAAAACAGGGAGCT...TGGACTCTTGAGAAAATTGGTACAGAAATGGAAATTTGCCTTGTTGCAACATAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000336032.4 ENST00000369472.1 |
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| CDS-3UTR CAA 90 bp | TGTATGTTGCAACAAGGCAAATTTCCATTTCTGTACCAATTTTCTCAAGAGTCCTTTGCAGAGGTGATCTaGGTTAGTGGCAAGTTATAT | + |
|
Preference number: 5 (lower is better) Translates to: CMLQQGKFPFLYQFSQESFAEVI*VSGKLY Trigger: ATATAACTTGCCACTAACCAAGATCACCTCTGCAAA...GGACTCTTGAGAAAATTGGTACAGAAATGGAAATTTGCCTTGTTGCAACATACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000336032.4 ENST00000369472.1 |
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| CDS-3UTR CAA 90 bp | GTATGTTGCAACAAGGCAAATTTCCATTTCTGTACCAATTTTCTCAAGAGTCCATTTGCAGAGGTGATCTaGGTTAGTGGCAAGTTATAT | + |
|
Preference number: 5 (lower is better) Translates to: VCCNKANFHFCTNFLKSPFAEVI*VSGKLY Trigger: ATATAACTTGCCACTAACCAAGATCACCTCTGCAAA...TGGACTCTTGAGAAAATTGGTACAGAAATGGAAATTTGCCTTGTTGCAACATAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000336032.4 ENST00000369472.1 |
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| CDS-3UTR CAA 90 bp | GTATGTTGCAACAAGGCAAATTTCCATTTCTGTACCAATTTTCTCAAGAGTCCATCTGTTTATCTTTGGTaGCTCATACAAGTGTATACC | + |
|
Preference number: 5 (lower is better) Translates to: VCCNKANFHFCTNFLKSPSVYLW*LIQVYT Trigger: GGTATACACTTGTATGAGCAACCAAAGATAAACAGA...TGGACTCTTGAGAAAATTGGTACAGAAATGGAAATTTGCCTTGTTGCAACATAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000336032.4 ENST00000369472.1 |
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| CDS-3UTR CAA 90 bp | TGTATGTTGCAACAAGGCAAATTTCCATTTCTGTACCAATTTTCTCAAGAGTCCACTCATCTTTTGCAATaGTATGTTGCAACAAGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: CMLQQGKFPFLYQFSQESTHLLQ*YVATRQ Trigger: TTGCCTTGTTGCAACATACAATTGCAAAAGATGAGT...GGACTCTTGAGAAAATTGGTACAGAAATGGAAATTTGCCTTGTTGCAACATACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000336032.4 ENST00000369472.1 |
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| CDS-3UTR CAA 90 bp | TTGTATGTTGCAACAAGGCAAATTTCCATTTCTGTACCAATTTTCTCAAGAGTCTCTGTCTGTTTATCTTaGGTTGCTCATACAAGTGTA | + |
|
Preference number: 5 (lower is better) Translates to: LYVATRQISISVPIFSRVSVCLS*VAHTSV Trigger: TACACTTGTATGAGCAACCAAAGATAAACAGACAGA...GACTCTTGAGAAAATTGGTACAGAAATGGAAATTTGCCTTGTTGCAACATACAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000336032.4 ENST00000369472.1 |
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| CDS-3UTR CAA 90 bp | GCAATTGTATGTTGCAACAAGGCAAATTTCCATTTCTGTACCAATTTTCTCAAGACTCATCTTTTGCAATaGTATGTTGCAACAAGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: AIVCCNKANFHFCTNFLKTHLLQ*YVATRQ Trigger: TTGCCTTGTTGCAACATACAATTGCAAAAGATGAGT...CTTGAGAAAATTGGTACAGAAATGGAAATTTGCCTTGTTGCAACATACAATTGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000336032.4 ENST00000369472.1 |
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| CDS GCA 72 bp | GTCGCGGGGCTCCGGCCGCCCTCCAGACTCGGCCGGTaGTGCTGGTACTGGTGGAAGCGGCTGGGCAGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: VAGLRPPSRLGR*CWYWWKRLGSC Trigger: GCAGCTGCCCAGCCGCTTCCACCAGTACCAGCAGCACCGGCCGAGTCTGGAGGGCGGCCGGAGCCCCGCGAC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000336032.4 |
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| CDS CCA 72 bp | CCGCCCTCCAGACTCGGCCGGTGCTGCTGGTACTGGTaGAAGCGGCTGGGCAGCTGCCCTGCGGGGCTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: PPSRLGRCCWYW*KRLGSCPAGLA Trigger: GGCCAGCCCCGCAGGGCAGCTGCCCAGCCGCTTCCACCAGTACCAGCAGCACCGGCCGAGTCTGGAGGGCGG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000336032.4 |
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| CDS CCA 72 bp | CGGCCGCCCTCCAGACTCGGCCGGTGCTGCTGGTACTaGTGGAAGCGGCTGGGCAGCTGCCCTGCGGGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: RPPSRLGRCCWY*WKRLGSCPAGL Trigger: CAGCCCCGCAGGGCAGCTGCCCAGCCGCTTCCACCAGTACCAGCAGCACCGGCCGAGTCTGGAGGGCGGCCG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000336032.4 |
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| CDS CCA 72 bp | GGGCTCCGGCCGCCCTCCAGACTCGGCCGGTGCTGCTaGTACTGGTGGAAGCGGCTGGGCAGCTGCCCTGCG | + |
|
Preference number: 6 (lower is better) Translates to: GLRPPSRLGRCC*YWWKRLGSCPA Trigger: CGCAGGGCAGCTGCCCAGCCGCTTCCACCAGTACCAGCAGCACCGGCCGAGTCTGGAGGGCGGCCGGAGCCC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000336032.4 |
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| CDS GCA 72 bp | GGCCCGCACCTTCTTCTTTCGCCGCTTCTTCGGCGCTaGCCGAGGAGTGCCTCCCGCCACGGCGAGGCTGCG | + |
|
Preference number: 6 (lower is better) Translates to: GPHLLLSPLLRR*PRSASRHGEAA Trigger: CGCAGCCTCGCCGTGGCGGGAGGCACTCCTCGGGCAGCGCCGAAGAAGCGGCGAAAGAAGAAGGTGCGGGCC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000336032.4 |
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| CDS GCA 72 bp | GGCGCAAGGCGGCCACCCAGGACGAGCGGCTCCCGCTaGGGGACGGAGACGACAGTCATAGCGCTAGGAAGC | + |
|
Preference number: 6 (lower is better) Translates to: GARRPPRTSGSR*GTETTVIALGS Trigger: GCTTCCTAGCGCTATGACTGTCGTCTCCGTCCCGCAGCGGGAGCCGCTCGTCCTGGGTGGCCGCCTTGCGCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000336032.4 ENST00000369472.1 |
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| CDS GCA 72 bp | TCTTCTTTCGCCGCTTCTTCGGCGCTGCCCGAGGAGTaGCTCCCGCCACGGCGAGGCTGCGGTTGGGCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: SSFAASSALPEE*LPPRRGCGWAE Trigger: CTCTGCCCAACCGCAGCCTCGCCGTGGCGGGAGGCACTCCTCGGGCAGCGCCGAAGAAGCGGCGAAAGAAGA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000336032.4 |
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| CDS CCA 72 bp | ACTGGTGGAAGCGGCTGGGCAGCTGCCCTGCGGGGCTaGCCCGCACCTTCTTCTTTCGCCGCTTCTTCGGCG | + |
|
Preference number: 6 (lower is better) Translates to: TGGSGWAAALRG*PAPSSFAASSA Trigger: CGCCGAAGAAGCGGCGAAAGAAGAAGGTGCGGGCCAGCCCCGCAGGGCAGCTGCCCAGCCGCTTCCACCAGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000336032.4 |
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| CDS GCA 72 bp | AGGTCAGGCCCGAGGCGGGCAGAGCCCCAACTGGACTaGGCGTCCCACACCGGGCACCTCACATTTTGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: RSGPRRAEPQLD*ASHTGHLTFWH Trigger: GTGCCAAAATGTGAGGTGCCCGGTGTGGGACGCGCAGTCCAGTTGGGGCTCTGCCCGCCTCGGGCCTGACCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000354922.3 |
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| CDS CAA 90 bp | AGAGCCCCAACTGGACTGCGCGTCCCACACCGGGCACCTCACATTTaGGCACAACTCCAACCAAACGAAACCCAGCCGCTCGGAGCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: RAPTGLRVPHRAPHI*AQLQPNETQPLGAH Trigger: GTGGGCTCCGAGCGGCTGGGTTTCGTTTGGTTGGAGTTGTGCCAAAATGTGAGGTGCCCGGTGTGGGACGCGCAGTCCAGTTGGGGCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000354922.3 |
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| CDS CCA 72 bp | CTGGACTGCGCGTCCCACACCGGGCACCTCACATTTTaGCACAACTCCAACCAAACGAAACCCAGCCGCTCG | + |
|
Preference number: 6 (lower is better) Translates to: LDCASHTGHLTF*HNSNQTKPSRS Trigger: CGAGCGGCTGGGTTTCGTTTGGTTGGAGTTGTGCCAAAATGTGAGGTGCCCGGTGTGGGACGCGCAGTCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000354922.3 |
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| CDS CAA 72 bp | ACTGGACTGCGCGTCCCACACCGGGCACCTCACATTTaGGCACAACTCCAACCAAACGAAACCCAGCCGCTC | + |
|
Preference number: 6 (lower is better) Translates to: TGLRVPHRAPHI*AQLQPNETQPL Trigger: GAGCGGCTGGGTTTCGTTTGGTTGGAGTTGTGCCAAAATGTGAGGTGCCCGGTGTGGGACGCGCAGTCCAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000354922.3 |
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| CDS CAA 72 bp | AAAATCAGTTTTGTGCGGCTCCTGCCAACTCTTAACTaGGAACCACTAAGTAGGTCAGGCCCGAGGCGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: KISFVRLLPTLN*EPLSRSGPRRA Trigger: TGCCCGCCTCGGGCCTGACCTACTTAGTGGTTCCAAGTTAAGAGTTGGCAGGAGCCGCACAAAACTGATTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000354922.3 |
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| CDS TCA 72 bp | TTTTGGTTGGAATTTTCAACAGTGCTTCCCATCCAGTaGCTAGGAGGCTTTGGAAGAACACTAGGAGAAGGT | + |
|
Preference number: 6 (lower is better) Translates to: FWLEFSTVLPIQ*LGGFGRTLGEG Trigger: ACCTTCTCCTAGTGTTCTTCCAAAGCCTCCTAGTCACTGGATGGGAAGCACTGTTGAAAATTCCAACCAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000336032.4 ENST00000354922.3 ENST00000369472.1 |
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| CDS GCA 72 bp | AAGAGGACCACAACTTTCCACGTCAATAAGGTTCACTaGCAGAGCTCCCTAGTTAGTACCTGTTCTAGAAAA | + |
|
Preference number: 6 (lower is better) Translates to: KRTTTFHVNKVH*QSSLVSTCSRK Trigger: TTTTCTAGAACAGGTACTAACTAGGGAGCTCTGGCAGTGAACCTTATTGACGTGGAAAGTTGTGGTCCTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000354922.3 |
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| CDS CAA 72 bp | CGAAGTACCACAGTGGCAAAAGTAATAAAATCAGTTTaGTGCGGCTCCTGCCAACTCTTAACTTGGAACCAC | + |
|
Preference number: 6 (lower is better) Translates to: RSTTVAKVIKSV*CGSCQLLTWNH Trigger: GTGGTTCCAAGTTAAGAGTTGGCAGGAGCCGCACAAAACTGATTTTATTACTTTTGCCACTGTGGTACTTCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000354922.3 |
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