RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PNPLA5 (Homo sapiens)

Ensembl gene IDs: ENSG00000100341

Ensembl transcript IDs: ENST00000216177.8, ENST00000381198.6, ENST00000438734.1, ENST00000593866.5, ENST00000597664.6

Found 399 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCCGGGGGCACAGCATGGGTCCCGTGCTGCCAATGGGGAGAGCAGTaGCTCGTGGAGAGGCCAGAGGCCTGGTGTCCCTGGCATCCTCTC +
Preference number: 1 (lower is better)
Translates to: AGGTAWVPCCQWGEQ*LVERPEAWCPWHPL
Trigger: GAGAGGATGCCAGGGACACCAGGCCTCTGGCCTCTCCACGAGTCACTGCTCTCCCCATTGGCAGCACGGGACCCATGCTGTGCCCCCGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
3UTR CCA 90 bp GCGCCCCAAGGAACGGGCTCCAAGCTGCAGGGTCTCCACGGAGATTaGCAGGGCCTCTTCCCGCTGGGGCAGATGTGGGCACACAGGACA +
Preference number: 1 (lower is better)
Translates to: APQGTGSKLQGLHGD*QGLFPLGQMWAHRT
Trigger: TGTCCTGTGTGCCCACATCTGCCCCAGCGGGAAGAGGCCCTGCCAATCTCCGTGGAGACCCTGCAGCTTGGAGCCCGTTCCTTGGGGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
3UTR CCA 90 bp GCACAGCATGGGTCCCGTGCTGCCAATGGGGAGAGCAGTGACTCGTaGAGAGGCCAGAGGCCTGGTGTCCCTGGCATCCTCTCTGCCCCA +
Preference number: 1 (lower is better)
Translates to: AQHGSRAANGESSDS*RGQRPGVPGILSAP
Trigger: TGGGGCAGAGAGGATGCCAGGGACACCAGGCCTCTGGCCTCTCCACGAGTCACTGCTCTCCCCATTGGCAGCACGGGACCCATGCTGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
3UTR CCA 90 bp GGTCTCCACGGAGATTGGCAGGGCCTCTTCCCGCTGGGGCAGATGTaGGCACACAGGACAAAGGCCAGAGCAGGAATCAAGGGACACCAG +
Preference number: 1 (lower is better)
Translates to: GLHGDWQGLFPLGQM*AHRTKARAGIKGHQ
Trigger: CTGGTGTCCCTTGATTCCTGCTCTGGCCTTTGTCCTGTGTGCCCACATCTGCCCCAGCGGGAAGAGGCCCTGCCAATCTCCGTGGAGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
3UTR CCA 90 bp CCAAGCTGCAGGGTCTCCACGGAGATTGGCAGGGCCTCTTCCCGCTaGGGCAGATGTGGGCACACAGGACAAAGGCCAGAGCAGGAATCA +
Preference number: 1 (lower is better)
Translates to: PSCRVSTEIGRASSR*GRCGHTGQRPEQES
Trigger: TGATTCCTGCTCTGGCCTTTGTCCTGTGTGCCCACATCTGCCCCAGCGGGAAGAGGCCCTGCCAATCTCCGTGGAGACCCTGCAGCTTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
3UTR CCA 90 bp CACCCTCTGGACCTGATAGGAATTCAGAAGTCAAGGTTTCCTGAGTaGGGTAGATGCCGGGGGTCACCCCCAAGGGCCGCTGCAGGACTG +
Preference number: 1 (lower is better)
Translates to: HPLDLIGIQKSRFPE*GRCRGSPPRAAAGL
Trigger: CAGTCCTGCAGCGGCCCTTGGGGGTGACCCCCGGCATCTACCCCACTCAGGAAACCTTGACTTCTGAATTCCTATCAGGTCCAGAGGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
3UTR-3UTR CCA 90 bp CGGGCTCCAAGCTGCAGGGTCTCCACGGAGATTGGCAGGGCCTCTTCCCGCTGGAGGGACACCAGTCACTaGGCTGGCCCTGCTCGGCCC +
Preference number: 2 (lower is better)
Translates to: RAPSCRVSTEIGRASSRWRDTSH*AGPARP
Trigger: GGGCCGAGCAGGGCCAGCCCAGTGACTGGTGTCCCT...CCAGCGGGAAGAGGCCCTGCCAATCTCCGTGGAGACCCTGCAGCTTGGAGCCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
3UTR-3UTR GCA 90 bp AGGGCCTGGCCGGGGGCACAGCATGGGTCCCGTGCTGCCAATGGGGAGAGCAGTGACATGCTGACAGGCTaGGCCCCAAGGAACGGGCTC +
Preference number: 2 (lower is better)
Translates to: RAWPGAQHGSRAANGESSDMLTG*APRNGL
Trigger: GAGCCCGTTCCTTGGGGCGCAGCCTGTCAGCATGTC...ACTGCTCTCCCCATTGGCAGCACGGGACCCATGCTGTGCCCCCGGCCAGGCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
3UTR-3UTR CCA 90 bp CCTGGGTACACAGTGACCGGGGACATGCTGACAGGCTGCGCCCCAAGGAACGGGAGGGACACCAGTCACTaGGCTGGCCCTGCTCGGCCC +
Preference number: 2 (lower is better)
Translates to: PGYTVTGDMLTGCAPRNGRDTSH*AGPARP
Trigger: GGGCCGAGCAGGGCCAGCCCAGTGACTGGTGTCCCT...CCCGTTCCTTGGGGCGCAGCCTGTCAGCATGTCCCCGGTCACTGTGTACCCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
3UTR-3UTR CCA 90 bp AGGGCCTGGCCGGGGGCACAGCATGGGTCCCGTGCTGCCAATGGGGAGAGCAGTAGGGCCTCTTCCCGCTaGGGCAGATGTGGGCACACA +
Preference number: 2 (lower is better)
Translates to: RAWPGAQHGSRAANGESSRASSR*GRCGHT
Trigger: TGTGTGCCCACATCTGCCCCAGCGGGAAGAGGCCCT...ACTGCTCTCCCCATTGGCAGCACGGGACCCATGCTGTGCCCCCGGCCAGGCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
3UTR CAA 90 bp TGCGCCCCAAGGAACGGGCTCCAAGCTGCAGGGTCTCCACGGAGATaGGCAGGGCCTCTTCCCGCTGGGGCAGATGTGGGCACACAGGAC +
Preference number: 2 (lower is better)
Translates to: CAPRNGLQAAGSPRR*AGPLPAGADVGTQD
Trigger: GTCCTGTGTGCCCACATCTGCCCCAGCGGGAAGAGGCCCTGCCAATCTCCGTGGAGACCCTGCAGCTTGGAGCCCGTTCCTTGGGGCGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
3UTR-3UTR TCA 90 bp AGGGCCTGGCCGGGGGCACAGCATGGGTCCCGTGCTGCCAATGGGGAGAGCAGTAAGAGGGAGGGCAGGTaGCCTGGGTACACAGTGACC +
Preference number: 2 (lower is better)
Translates to: RAWPGAQHGSRAANGESSKREGR*PGYTVT
Trigger: GGTCACTGTGTACCCAGGTCACCTGCCCTCCCTCTT...ACTGCTCTCCCCATTGGCAGCACGGGACCCATGCTGTGCCCCCGGCCAGGCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
3UTR-3UTR GCA 90 bp CGGGGGCACAGCATGGGTCCCGTGCTGCCAATGGGGAGAGCAGTGACTCGTGGACCCTGGCATCCTCTCTaGCCCAGGTACAGGCACAGC +
Preference number: 2 (lower is better)
Translates to: RGHSMGPVLPMGRAVTRGPWHPL*PRYRHS
Trigger: GCTGTGCCTGTACCTGGGGCAGAGAGGATGCCAGGG...TCCACGAGTCACTGCTCTCCCCATTGGCAGCACGGGACCCATGCTGTGCCCCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
3UTR-3UTR CCA 90 bp GTGACCTGGGTACACAGTGACCGGGGACATGCTGACAGGCTGCGCCCCAAGGAAAGGGACACCAGTCACTaGGCTGGCCCTGCTCGGCCC +
Preference number: 2 (lower is better)
Translates to: VTWVHSDRGHADRLRPKERDTSH*AGPARP
Trigger: GGGCCGAGCAGGGCCAGCCCAGTGACTGGTGTCCCT...TTCCTTGGGGCGCAGCCTGTCAGCATGTCCCCGGTCACTGTGTACCCAGGTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
3UTR-3UTR CCA 90 bp CCTGGGTACACAGTGACCGGGGACATGCTGACAGGCTGCGCCCCAAGGAACGGGAGGGCCTCTTCCCGCTaGGGCAGATGTGGGCACACA +
Preference number: 2 (lower is better)
Translates to: PGYTVTGDMLTGCAPRNGRASSR*GRCGHT
Trigger: TGTGTGCCCACATCTGCCCCAGCGGGAAGAGGCCCT...CCCGTTCCTTGGGGCGCAGCCTGTCAGCATGTCCCCGGTCACTGTGTACCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
3UTR-3UTR CCA 90 bp GTGCTCCGTGGGCAGCTCCACGGCAGAACAGGAGCCCCTCTCCCCAGCAATGCTGGAGGGCAGGTGACCTaGGTACACAGTGACCGGGGA +
Preference number: 2 (lower is better)
Translates to: VLRGQLHGRTGAPLPSNAGGQVT*VHSDRG
Trigger: TCCCCGGTCACTGTGTACCCAGGTCACCTGCCCTCC...AGCATTGCTGGGGAGAGGGGCTCCTGTTCTGCCGTGGAGCTGCCCACGGAGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
3UTR-3UTR TCA 90 bp AGGGCCTGGCCGGGGGCACAGCATGGGTCCCGTGCTGCCAATGGGGAGAGCAGTAACCTTCTGCAGGAATaGGGCTGTGGGGATAGCAGG +
Preference number: 2 (lower is better)
Translates to: RAWPGAQHGSRAANGESSNLLQE*GCGDSR
Trigger: CCTGCTATCCCCACAGCCTCATTCCTGCAGAAGGTT...ACTGCTCTCCCCATTGGCAGCACGGGACCCATGCTGTGCCCCCGGCCAGGCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
3UTR-3UTR CCA 90 bp AGGGCCTGGCCGGGGGCACAGCATGGGTCCCGTGCTGCCAATGGGGAGAGCAGTTCAAGGTTTCCTGAGTaGGGTAGATGCCGGGGGTCA +
Preference number: 2 (lower is better)
Translates to: RAWPGAQHGSRAANGESSSRFPE*GRCRGS
Trigger: TGACCCCCGGCATCTACCCCACTCAGGAAACCTTGA...ACTGCTCTCCCCATTGGCAGCACGGGACCCATGCTGTGCCCCCGGCCAGGCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
3UTR-3UTR GCA 90 bp ACTGGGCCCAACAGAAGCACCCACAGCTGGGATCCTGAAAAGACCTGGACCCCCGACATGCTGACAGGCTaGGCCCCAAGGAACGGGCTC +
Preference number: 2 (lower is better)
Translates to: TGPNRSTHSWDPEKTWTPDMLTG*APRNGL
Trigger: GAGCCCGTTCCTTGGGGCGCAGCCTGTCAGCATGTC...GGGGGTCCAGGTCTTTTCAGGATCCCAGCTGTGGGTGCTTCTGTTGGGCCCAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
3UTR-3UTR CCA 90 bp GCCACTGGGCCCAACAGAAGCACCCACAGCTGGGATCCTGAAAAGACCTGGACCGGAGGGCAGGTGACCTaGGTACACAGTGACCGGGGA +
Preference number: 2 (lower is better)
Translates to: ATGPNRSTHSWDPEKTWTGGQVT*VHSDRG
Trigger: TCCCCGGTCACTGTGTACCCAGGTCACCTGCCCTCC...GGTCCAGGTCTTTTCAGGATCCCAGCTGTGGGTGCTTCTGTTGGGCCCAGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
3UTR-3UTR CCA 90 bp ACTGGGCCCAACAGAAGCACCCACAGCTGGGATCCTGAAAAGACCTGGACCCCCGGAGGGCAGGTGACCTaGGTACACAGTGACCGGGGA +
Preference number: 2 (lower is better)
Translates to: TGPNRSTHSWDPEKTWTPGGQVT*VHSDRG
Trigger: TCCCCGGTCACTGTGTACCCAGGTCACCTGCCCTCC...GGGGGTCCAGGTCTTTTCAGGATCCCAGCTGTGGGTGCTTCTGTTGGGCCCAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
3UTR-3UTR CCA 90 bp ACTGGGCCCAACAGAAGCACCCACAGCTGGGATCCTGAAAAGACCTGGACCCCCAGGACTGAGAAAGTCTaGGGGGAGCACCCCCACCCC +
Preference number: 2 (lower is better)
Translates to: TGPNRSTHSWDPEKTWTPRTEKV*GEHPHP
Trigger: GGGGTGGGGGTGCTCCCCCCAGACTTTCTCAGTCCT...GGGGGTCCAGGTCTTTTCAGGATCCCAGCTGTGGGTGCTTCTGTTGGGCCCAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
3UTR-3UTR TCA 90 bp GGGCCACTGGGCCCAACAGAAGCACCCACAGCTGGGATCCTGAAAAGACCTGGAAAGAGGGAGGGCAGGTaGCCTGGGTACACAGTGACC +
Preference number: 2 (lower is better)
Translates to: GPLGPTEAPTAGILKRPGKREGR*PGYTVT
Trigger: GGTCACTGTGTACCCAGGTCACCTGCCCTCCCTCTT...TCCAGGTCTTTTCAGGATCCCAGCTGTGGGTGCTTCTGTTGGGCCCAGTGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
3UTR-3UTR GCA 90 bp CGGGGGCACAGCATGGGTCCCGTGCTGCCAATGGGGAGAGCAGTGACTCGTGGAACGTCACAAACCTTCTaGAGGAATGAGGCTGTGGGG +
Preference number: 2 (lower is better)
Translates to: RGHSMGPVLPMGRAVTRGTSQTF*RNEAVG
Trigger: CCCCACAGCCTCATTCCTGCAGAAGGTTTGTGACGT...TCCACGAGTCACTGCTCTCCCCATTGGCAGCACGGGACCCATGCTGTGCCCCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
3UTR-3UTR CCA 90 bp CCCTGGCATCCTCTCTGCCCCAGGTACAGGCACAGCTACGTCACAAACCTTCTGCCGCTGGGGCAGATGTaGGCACACAGGACAAAGGCC +
Preference number: 2 (lower is better)
Translates to: PWHPLCPRYRHSYVTNLLPLGQM*AHRTKA
Trigger: GGCCTTTGTCCTGTGTGCCCACATCTGCCCCAGCGG...CAGAAGGTTTGTGACGTAGCTGTGCCTGTACCTGGGGCAGAGAGGATGCCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
3UTR-3UTR TCA 90 bp CCCTGGCATCCTCTCTGCCCCAGGTACAGGCACAGCTACGTCACAAACCTTCTGAAGAGGGAGGGCAGGTaGCCTGGGTACACAGTGACC +
Preference number: 2 (lower is better)
Translates to: PWHPLCPRYRHSYVTNLLKREGR*PGYTVT
Trigger: GGTCACTGTGTACCCAGGTCACCTGCCCTCCCTCTT...CAGAAGGTTTGTGACGTAGCTGTGCCTGTACCTGGGGCAGAGAGGATGCCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
3UTR-3UTR GCA 90 bp ACTGGGCCCAACAGAAGCACCCACAGCTGGGATCCTGAAAAGACCTGGACCCCCGAACGGGCTCCAAGCTaGAGGGTCTCCACGGAGATT +
Preference number: 2 (lower is better)
Translates to: TGPNRSTHSWDPEKTWTPERAPS*RVSTEI
Trigger: AATCTCCGTGGAGACCCTGCAGCTTGGAGCCCGTTC...GGGGGTCCAGGTCTTTTCAGGATCCCAGCTGTGGGTGCTTCTGTTGGGCCCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
3UTR-3UTR CCA 90 bp CCCACGTGTATTCCTTTGCTTCCCGTTCTCACTCACGCCTCCATCTCTCTAACCAGGGACACCAGTCACTaGGCTGGCCCTGCTCGGCCC +
Preference number: 2 (lower is better)
Translates to: PTCIPLLPVLTHASISLTRDTSH*AGPARP
Trigger: GGGCCGAGCAGGGCCAGCCCAGTGACTGGTGTCCCT...GGTTAGAGAGATGGAGGCGTGAGTGAGAACGGGAAGCAAAGGAATACACGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
3UTR-3UTR CCA 90 bp CTTTCTCAATCTTCTGTGAGGTGCTCCGTGGGCAGCTCCACGGCAGAACAGGAGGGAGGGCAGGTGACCTaGGTACACAGTGACCGGGGA +
Preference number: 2 (lower is better)
Translates to: LSQSSVRCSVGSSTAEQEGGQVT*VHSDRG
Trigger: TCCCCGGTCACTGTGTACCCAGGTCACCTGCCCTCC...CTCCTGTTCTGCCGTGGAGCTGCCCACGGAGCACCTCACAGAAGATTGAGAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
3UTR-3UTR CCA 90 bp GGGCCACTGGGCCCAACAGAAGCACCCACAGCTGGGATCCTGAAAAGACCTGGATCAAGGTTTCCTGAGTaGGGTAGATGCCGGGGGTCA +
Preference number: 2 (lower is better)
Translates to: GPLGPTEAPTAGILKRPGSRFPE*GRCRGS
Trigger: TGACCCCCGGCATCTACCCCACTCAGGAAACCTTGA...TCCAGGTCTTTTCAGGATCCCAGCTGTGGGTGCTTCTGTTGGGCCCAGTGGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
3UTR-3UTR CCA 90 bp CCCACGTGTATTCCTTTGCTTCCCGTTCTCACTCACGCCTCCATCTCTCTAACCAGGGCCTCTTCCCGCTaGGGCAGATGTGGGCACACA +
Preference number: 2 (lower is better)
Translates to: PTCIPLLPVLTHASISLTRASSR*GRCGHT
Trigger: TGTGTGCCCACATCTGCCCCAGCGGGAAGAGGCCCT...GGTTAGAGAGATGGAGGCGTGAGTGAGAACGGGAAGCAAAGGAATACACGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
3UTR-3UTR GCA 90 bp GTTCCCACGTGTATTCCTTTGCTTCCCGTTCTCACTCACGCCTCCATCTCTCTAGACATGCTGACAGGCTaGGCCCCAAGGAACGGGCTC +
Preference number: 2 (lower is better)
Translates to: VPTCIPLLPVLTHASISLDMLTG*APRNGL
Trigger: GAGCCCGTTCCTTGGGGCGCAGCCTGTCAGCATGTC...TAGAGAGATGGAGGCGTGAGTGAGAACGGGAAGCAAAGGAATACACGTGGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
3UTR-3UTR CCA 90 bp TTAGTTCCCACGTGTATTCCTTTGCTTCCCGTTCTCACTCACGCCTCCATCTCTGATAGCAGGGGCCACTaGGCCCAACAGAAGCACCCA +
Preference number: 2 (lower is better)
Translates to: LVPTCIPLLPVLTHASISDSRGH*AQQKHP
Trigger: TGGGTGCTTCTGTTGGGCCCAGTGGCCCCTGCTATC...AGAGATGGAGGCGTGAGTGAGAACGGGAAGCAAAGGAATACACGTGGGAACTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
3UTR-3UTR CCA 90 bp AGGCTGGTCATTTTTCTCTTTAGTTCCCACGTGTATTCCTTTGCTTCCCGTTCTGCCGGGGGCACAGCATaGGTCCCGTGCTGCCAATGG +
Preference number: 2 (lower is better)
Translates to: RLVIFLFSSHVYSFASRSAGGTA*VPCCQW
Trigger: CCATTGGCAGCACGGGACCCATGCTGTGCCCCCGGC...AGAACGGGAAGCAAAGGAATACACGTGGGAACTAAAGAGAAAAATGACCAGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
3UTR-3UTR CCA 90 bp TTAGTTCCCACGTGTATTCCTTTGCTTCCCGTTCTCACTCACGCCTCCATCTCTCCCCATCATCTCAGTTaGCTCCTCTGGTCTCTGACG +
Preference number: 2 (lower is better)
Translates to: LVPTCIPLLPVLTHASISPHHLS*LLWSLT
Trigger: CGTCAGAGACCAGAGGAGCCAACTGAGATGATGGGG...AGAGATGGAGGCGTGAGTGAGAACGGGAAGCAAAGGAATACACGTGGGAACTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
3UTR CAA 90 bp TGCCCAGGCTGGTCATTTTTCTCTTTAGTTCCCACGTGTATTCCTTaGCTTCCCGTTCTCACTCACGCCTCCATCTCTCTAACCTCCCCA +
Preference number: 2 (lower is better)
Translates to: CPGWSFFSLVPTCIP*LPVLTHASISLTSP
Trigger: TGGGGAGGTTAGAGAGATGGAGGCGTGAGTGAGAACGGGAAGCAAAGGAATACACGTGGGAACTAAAGAGAAAAATGACCAGCCTGGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
3UTR-3UTR GCA 90 bp AGGCTGGTCATTTTTCTCTTTAGTTCCCACGTGTATTCCTTTGCTTCCCGTTCTACCCCCAAGGGCCGCTaGAGGACTGAGAAAGTCTGG +
Preference number: 2 (lower is better)
Translates to: RLVIFLFSSHVYSFASRSTPKGR*RTEKVW
Trigger: CCAGACTTTCTCAGTCCTGCAGCGGCCCTTGGGGGT...AGAACGGGAAGCAAAGGAATACACGTGGGAACTAAAGAGAAAAATGACCAGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
3UTR-3UTR CCA 90 bp TTAGTTCCCACGTGTATTCCTTTGCTTCCCGTTCTCACTCACGCCTCCATCTCTAGAAGCACCCACAGCTaGGATCCTGAAAAGACCTGG +
Preference number: 2 (lower is better)
Translates to: LVPTCIPLLPVLTHASISRSTHS*DPEKTW
Trigger: CCAGGTCTTTTCAGGATCCCAGCTGTGGGTGCTTCT...AGAGATGGAGGCGTGAGTGAGAACGGGAAGCAAAGGAATACACGTGGGAACTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
3UTR GCA 72 bp GCTGACAGGCTGCGCCCCAAGGAACGGGCTCCAAGCTaGAGGGTCTCCACGGAGATTGGCAGGGCCTCTTCC +
Preference number: 3 (lower is better)
Translates to: ADRLRPKERAPS*RVSTEIGRASS
Trigger: GGAAGAGGCCCTGCCAATCTCCGTGGAGACCCTGCAGCTTGGAGCCCGTTCCTTGGGGCGCAGCCTGTCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
3UTR CCA 72 bp GGAACGGGCTCCAAGCTGCAGGGTCTCCACGGAGATTaGCAGGGCCTCTTCCCGCTGGGGCAGATGTGGGCA +
Preference number: 3 (lower is better)
Translates to: GTGSKLQGLHGD*QGLFPLGQMWA
Trigger: TGCCCACATCTGCCCCAGCGGGAAGAGGCCCTGCCAATCTCCGTGGAGACCCTGCAGCTTGGAGCCCGTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
3UTR GCA 72 bp CCTGGGTACACAGTGACCGGGGACATGCTGACAGGCTaGGCCCCAAGGAACGGGCTCCAAGCTGCAGGGTCT +
Preference number: 3 (lower is better)
Translates to: PGYTVTGDMLTG*APRNGLQAAGS
Trigger: AGACCCTGCAGCTTGGAGCCCGTTCCTTGGGGCGCAGCCTGTCAGCATGTCCCCGGTCACTGTGTACCCAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
3UTR CCA 72 bp AGGGTCTCCACGGAGATTGGCAGGGCCTCTTCCCGCTaGGGCAGATGTGGGCACACAGGACAAAGGCCAGAG +
Preference number: 3 (lower is better)
Translates to: RVSTEIGRASSR*GRCGHTGQRPE
Trigger: CTCTGGCCTTTGTCCTGTGTGCCCACATCTGCCCCAGCGGGAAGAGGCCCTGCCAATCTCCGTGGAGACCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
3UTR CCA 72 bp CCTGATGAGACGGGGCAAGAGGGAGGGCAGGTGACCTaGGTACACAGTGACCGGGGACATGCTGACAGGCTG +
Preference number: 3 (lower is better)
Translates to: PDETGQEGGQVT*VHSDRGHADRL
Trigger: CAGCCTGTCAGCATGTCCCCGGTCACTGTGTACCCAGGTCACCTGCCCTCCCTCTTGCCCCGTCTCATCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
3UTR GCA 72 bp CGCGGGCATCAGGCACTTTCTCAATCTTCTGTGAGGTaGTCCGTGGGCAGCTCCACGGCAGAACAGGAGCCC +
Preference number: 3 (lower is better)
Translates to: RGHQALSQSSVR*SVGSSTAEQEP
Trigger: GGGCTCCTGTTCTGCCGTGGAGCTGCCCACGGAGCACCTCACAGAAGATTGAGAAAGTGCCTGATGCCCGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
3UTR CCA 72 bp GGAGCACCCCCACCCCATCATCTCAGTTGGCTCCTCTaGTCTCTGACGCGGGCATCAGGCACTTTCTCAATC +
Preference number: 3 (lower is better)
Translates to: GAPPPHHLSWLL*SLTRASGTFSI
Trigger: GATTGAGAAAGTGCCTGATGCCCGCGTCAGAGACCAGAGGAGCCAACTGAGATGATGGGGTGGGGGTGCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
3UTR CCA 72 bp GACCTGATAGGAATTCAGAAGTCAAGGTTTCCTGAGTaGGGTAGATGCCGGGGGTCACCCCCAAGGGCCGCT +
Preference number: 3 (lower is better)
Translates to: DLIGIQKSRFPE*GRCRGSPPRAA
Trigger: AGCGGCCCTTGGGGGTGACCCCCGGCATCTACCCCACTCAGGAAACCTTGACTTCTGAATTCCTATCAGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
3UTR-3UTR CAA 90 bp CCCACGTGTATTCCTTTGCTTCCCGTTCTCACTCACGCCTCCATCTCTCTAACCACCCCATCATCTCAGTaGGCTCCTCTGGTCTCTGAC +
Preference number: 3 (lower is better)
Translates to: PTCIPLLPVLTHASISLTTPSSQ*APLVSD
Trigger: GTCAGAGACCAGAGGAGCCAACTGAGATGATGGGGT...GGTTAGAGAGATGGAGGCGTGAGTGAGAACGGGAAGCAAAGGAATACACGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
3UTR-3UTR CAA 90 bp GTTCCCACGTGTATTCCTTTGCTTCCCGTTCTCACTCACGCCTCCATCTCTCTAACCCCATCATCTCAGTaGGCTCCTCTGGTCTCTGAC +
Preference number: 3 (lower is better)
Translates to: VPTCIPLLPVLTHASISLTPSSQ*APLVSD
Trigger: GTCAGAGACCAGAGGAGCCAACTGAGATGATGGGGT...TAGAGAGATGGAGGCGTGAGTGAGAACGGGAAGCAAAGGAATACACGTGGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp AGGGCCTGGCCGGGGGCACAGCATGGGTCCCGTGCTGCCAATGGGGAGAGCAGTGGCGCAGGCATTCGGTaGCGCCCACGTGGTGGGCGC +
Preference number: 4 (lower is better)
Translates to: RAWPGAQHGSRAANGESSGAGIR*RPRGGR
Trigger: GCGCCCACCACGTGGGCGCCACCGAATGCCTGCGCC...ACTGCTCTCCCCATTGGCAGCACGGGACCCATGCTGTGCCCCCGGCCAGGCCCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp GGCCAGAGCAGGAATCAAGGGACACCAGTCACTGGGCTGGCCCTGCTCGGCCCCGGCGCAGGCATTCGGTaGCGCCCACGTGGTGGGCGC +
Preference number: 4 (lower is better)
Translates to: GQSRNQGTPVTGLALLGPGAGIR*RPRGGR
Trigger: GCGCCCACCACGTGGGCGCCACCGAATGCCTGCGCC...GGGGCCGAGCAGGGCCAGCCCAGTGACTGGTGTCCCTTGATTCCTGCTCTGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp CCACGGAGATTGGCAGGGCCTCTTCCCGCTGGGGCAGATGTGGGCACACAGGACGGCGCAGGCATTCGGTaGCGCCCACGTGGTGGGCGC +
Preference number: 4 (lower is better)
Translates to: PRRLAGPLPAGADVGTQDGAGIR*RPRGGR
Trigger: GCGCCCACCACGTGGGCGCCACCGAATGCCTGCGCC...GTCCTGTGTGCCCACATCTGCCCCAGCGGGAAGAGGCCCTGCCAATCTCCGTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp AGGCTGCGCCCCAAGGAACGGGCTCCAAGCTGCAGGGTCTCCACGGAGATTGGCAGGCGCGGGGCTCGCTaGCGCAGGCATTCGGTGGCG +
Preference number: 4 (lower is better)
Translates to: RLRPKERAPSCRVSTEIGRRGAR*RRHSVA
Trigger: CGCCACCGAATGCCTGCGCCAGCGAGCCCCGCGCCT...GCCAATCTCCGTGGAGACCCTGCAGCTTGGAGCCCGTTCCTTGGGGCGCAGCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR GCA 90 bp AGGCTGCGCCCCAAGGAACGGGCTCCAAGCTGCAGGGTCTCCACGGAGATTGGCTGTCCAGGCCCCGAGTaGCAGAAGCGGGCCCACCGG +
Preference number: 4 (lower is better)
Translates to: RLRPKERAPSCRVSTEIGCPGPE*QKRAHR
Trigger: CCGGTGGGCCCGCTTCTGGCACTCGGGGCCTGGACA...GCCAATCTCCGTGGAGACCCTGCAGCTTGGAGCCCGTTCCTTGGGGCGCAGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR GCA 90 bp CGGGGGCACAGCATGGGTCCCGTGCTGCCAATGGGGAGAGCAGTGACTCGTGGATGTCCAGGCCCCGAGTaGCAGAAGCGGGCCCACCGG +
Preference number: 4 (lower is better)
Translates to: RGHSMGPVLPMGRAVTRGCPGPE*QKRAHR
Trigger: CCGGTGGGCCCGCTTCTGGCACTCGGGGCCTGGACA...TCCACGAGTCACTGCTCTCCCCATTGGCAGCACGGGACCCATGCTGTGCCCCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR GCA 90 bp ATGCTGACAGGCTGCGCCCCAAGGAACGGGCTCCAAGCTGCAGGGTCTCCACGGTCACTGGGCTGGCCCTaGTCGGCCCCCTCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: MLTGCAPRNGLQAAGSPRSLGWP*SAPSGL
Trigger: CAGGCCTGAGGGGGCCGAGCAGGGCCAGCCCAGTGA...CCGTGGAGACCCTGCAGCTTGGAGCCCGTTCCTTGGGGCGCAGCCTGTCAGCAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp GGCCAGAGCAGGAATCAAGGGACACCAGTCACTGGGCTGGCCCTGCTCGGCCCCCCCAAATGTGGGCTCTaGAGGGAGCCGGGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: GQSRNQGTPVTGLALLGPPKCGL*REPGWG
Trigger: GCCCCAGCCCGGCTCCCTCCAGAGCCCACATTTGGG...GGGGCCGAGCAGGGCCAGCCCAGTGACTGGTGTCCCTTGATTCCTGCTCTGGCC
69% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp GCCCCAAGGAACGGGCTCCAAGCTGCAGGGTCTCCACGGAGATTGGCAGGGCCTCCCCCTCAGGCCTGGTaGGTGGGCCCGAGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: APRNGLQAAGSPRRLAGPPPQAW*VGPSSS
Trigger: AGAGGAGCTCGGGCCCACCCACCAGGCCTGAGGGGG...AGGCCCTGCCAATCTCCGTGGAGACCCTGCAGCTTGGAGCCCGTTCCTTGGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR TCA 90 bp GCCCCAAGGAACGGGCTCCAAGCTGCAGGGTCTCCACGGAGATTGGCAGGGCCTGGAAGGGTCACTCCGTaGCCCGGGATAGGGCCGGGA +
Preference number: 4 (lower is better)
Translates to: APRNGLQAAGSPRRLAGPGRVTP*PGIGPG
Trigger: TCCCGGCCCTATCCCGGGTCACGGAGTGACCCTTCC...AGGCCCTGCCAATCTCCGTGGAGACCCTGCAGCTTGGAGCCCGTTCCTTGGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR GCA 90 bp AGGGCCTGGCCGGGGGCACAGCATGGGTCCCGTGCTGCCAATGGGGAGAGCAGTCCCTGGCATCCTCTCTaGCCCAGGTACAGGCACAGC +
Preference number: 4 (lower is better)
Translates to: RAWPGAQHGSRAANGESSPWHPL*PRYRHS
Trigger: GCTGTGCCTGTACCTGGGGCAGAGAGGATGCCAGGG...ACTGCTCTCCCCATTGGCAGCACGGGACCCATGCTGTGCCCCCGGCCAGGCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp AGGCTGCGCCCCAAGGAACGGGCTCCAAGCTGCAGGGTCTCCACGGAGATTGGCCCCAAATGTGGGCTCTaGAGGGAGCCGGGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: RLRPKERAPSCRVSTEIGPKCGL*REPGWG
Trigger: GCCCCAGCCCGGCTCCCTCCAGAGCCCACATTTGGG...GCCAATCTCCGTGGAGACCCTGCAGCTTGGAGCCCGTTCCTTGGGGCGCAGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp CAGGCTGCGCCCCAAGGAACGGGCTCCAAGCTGCAGGGTCTCCACGGAGATTGGCCCAAATGTGGGCTCTaGAGGGAGCCGGGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: QAAPQGTGSKLQGLHGDWPKCGL*REPGWG
Trigger: GCCCCAGCCCGGCTCCCTCCAGAGCCCACATTTGGG...CCAATCTCCGTGGAGACCCTGCAGCTTGGAGCCCGTTCCTTGGGGCGCAGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp GGGTCTCCACGGAGATTGGCAGGGCCTCTTCCCGCTGGGGCAGATGTGGGCACAGGCTGGGCCCAAATGTaGGCTCTGGAGGGAGCCGGG +
Preference number: 4 (lower is better)
Translates to: GSPRRLAGPLPAGADVGTGWAQM*ALEGAG
Trigger: CCCGGCTCCCTCCAGAGCCCACATTTGGGCCCAGCC...TGTGCCCACATCTGCCCCAGCGGGAAGAGGCCCTGCCAATCTCCGTGGAGACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp CGGGGGCACAGCATGGGTCCCGTGCTGCCAATGGGGAGAGCAGTGACTCGTGGACCTCTAAGAAGCCCATaGCGGGTGGACCGGGCGGGG +
Preference number: 4 (lower is better)
Translates to: RGHSMGPVLPMGRAVTRGPLRSP*RVDRAG
Trigger: CCCCGCCCGGTCCACCCGCCATGGGCTTCTTAGAGG...TCCACGAGTCACTGCTCTCCCCATTGGCAGCACGGGACCCATGCTGTGCCCCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp GGGTCTCCACGGAGATTGGCAGGGCCTCTTCCCGCTGGGGCAGATGTGGGCACACACCAGTCACTGGGCTaGCCCTGCTCGGCCCCCTCA +
Preference number: 4 (lower is better)
Translates to: GSPRRLAGPLPAGADVGTHQSLG*PCSAPS
Trigger: TGAGGGGGCCGAGCAGGGCCAGCCCAGTGACTGGTG...TGTGCCCACATCTGCCCCAGCGGGAAGAGGCCCTGCCAATCTCCGTGGAGACCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp AGGCTGCGCCCCAAGGAACGGGCTCCAAGCTGCAGGGTCTCCACGGAGATTGGCAGGGACACCAGTCACTaGGCTGGCCCTGCTCGGCCC +
Preference number: 4 (lower is better)
Translates to: RLRPKERAPSCRVSTEIGRDTSH*AGPARP
Trigger: GGGCCGAGCAGGGCCAGCCCAGTGACTGGTGTCCCT...GCCAATCTCCGTGGAGACCCTGCAGCTTGGAGCCCGTTCCTTGGGGCGCAGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp CCACGGAGATTGGCAGGGCCTCTTCCCGCTGGGGCAGATGTGGGCACACAGGACGCCGGGGGCACAGCATaGGTCCCGTGCTGCCAATGG +
Preference number: 4 (lower is better)
Translates to: PRRLAGPLPAGADVGTQDAGGTA*VPCCQW
Trigger: CCATTGGCAGCACGGGACCCATGCTGTGCCCCCGGC...GTCCTGTGTGCCCACATCTGCCCCAGCGGGAAGAGGCCCTGCCAATCTCCGTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR TCA 90 bp ATGCTGACAGGCTGCGCCCCAAGGAACGGGCTCCAAGCTGCAGGGTCTCCACGGGGAAGGGCGACACCGTaGTGGTGGAGGGGCAGTCTG +
Preference number: 4 (lower is better)
Translates to: MLTGCAPRNGLQAAGSPRGRATP*WWRGSL
Trigger: CAGACTGCCCCTCCACCATCACGGTGTCGCCCTTCC...CCGTGGAGACCCTGCAGCTTGGAGCCCGTTCCTTGGGGCGCAGCCTGTCAGCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216177.8
ENST00000597664.6
CDS-3UTR TCA 90 bp CGGGCTCCAAGCTGCAGGGTCTCCACGGAGATTGGCAGGGCCTCTTCCCGCTGGTGGGGTGCAGTGGCGTaGTCACGGTTCACTGCAGCC +
Preference number: 4 (lower is better)
Translates to: RAPSCRVSTEIGRASSRWWGAVA*SRFTAA
Trigger: GGCTGCAGTGAACCGTGATCACGCCACTGCACCCCA...CCAGCGGGAAGAGGCCCTGCCAATCTCCGTGGAGACCCTGCAGCTTGGAGCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216177.8
ENST00000593866.5
ENST00000597664.6
CDS-3UTR GCA 90 bp AGCTGCAGGGTCTCCACGGAGATTGGCAGGGCCTCTTCCCGCTGGGGCAGATGTGGGATAGGGCCGGGATaGAGCCTTGGACGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: SCRVSTEIGRASSRWGRCGIGPG*SLGRGW
Trigger: CCAGCCCCGTCCAAGGCTGCATCCCGGCCCTATCCC...ACATCTGCCCCAGCGGGAAGAGGCCCTGCCAATCTCCGTGGAGACCCTGCAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR GCA 90 bp CCTGGGTACACAGTGACCGGGGACATGCTGACAGGCTGCGCCCCAAGGAACGGGACGAGGAACCGTAGATaGGGCGGGCGCCCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: PGYTVTGDMLTGCAPRNGTRNRR*GGRPGG
Trigger: TCCTCCAGGGCGCCCGCCGCATCTACGGTTCCTCGT...CCCGTTCCTTGGGGCGCAGCCTGTCAGCATGTCCCCGGTCACTGTGTACCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR GCA 90 bp AGGCTGCGCCCCAAGGAACGGGCTCCAAGCTGCAGGGTCTCCACGGAGATTGGCACGAGGAACCGTAGATaGGGCGGGCGCCCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: RLRPKERAPSCRVSTEIGTRNRR*GGRPGG
Trigger: TCCTCCAGGGCGCCCGCCGCATCTACGGTTCCTCGT...GCCAATCTCCGTGGAGACCCTGCAGCTTGGAGCCCGTTCCTTGGGGCGCAGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR GCA 90 bp AGGGCCTGGCCGGGGGCACAGCATGGGTCCCGTGCTGCCAATGGGGAGAGCAGTGCATCCTGCAGCTGCTaGTTGACGTGCTCGATGGGC +
Preference number: 4 (lower is better)
Translates to: RAWPGAQHGSRAANGESSASCSC*LTCSMG
Trigger: GCCCATCGAGCACGTCAAGCAGCAGCTGCAGGATGC...ACTGCTCTCCCCATTGGCAGCACGGGACCCATGCTGTGCCCCCGGCCAGGCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216177.8
ENST00000597664.6
CDS-3UTR GCA 90 bp CCACGGAGATTGGCAGGGCCTCTTCCCGCTGGGGCAGATGTGGGCACACAGGACAGCGGGTCAGCGAAATaGCCAGCCGCTGGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: PRRLAGPLPAGADVGTQDSGSAK*PAAGRP
Trigger: TGGCCTCCCAGCGGCTGGGCATTTCGCTGACCCGCT...GTCCTGTGTGCCCACATCTGCCCCAGCGGGAAGAGGCCCTGCCAATCTCCGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216177.8
ENST00000597664.6
CDS-3UTR GCA 90 bp GTGACCTGGGTACACAGTGACCGGGGACATGCTGACAGGCTGCGCCCCAAGGAATCACTGGGCTGGCCCTaGTCGGCCCCCTCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: VTWVHSDRGHADRLRPKESLGWP*SAPSGL
Trigger: CAGGCCTGAGGGGGCCGAGCAGGGCCAGCCCAGTGA...TTCCTTGGGGCGCAGCCTGTCAGCATGTCCCCGGTCACTGTGTACCCAGGTCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR GCA 90 bp CGGGCTCCAAGCTGCAGGGTCTCCACGGAGATTGGCAGGGCCTCTTCCCGCTGGGACATGCTGACAGGCTaGGCCCCAAGGAACGGGCTC +
Preference number: 4 (lower is better)
Translates to: RAPSCRVSTEIGRASSRWDMLTG*APRNGL
Trigger: GAGCCCGTTCCTTGGGGCGCAGCCTGTCAGCATGTC...CCAGCGGGAAGAGGCCCTGCCAATCTCCGTGGAGACCCTGCAGCTTGGAGCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR GCA 90 bp AGGGCCTGGCCGGGGGCACAGCATGGGTCCCGTGCTGCCAATGGGGAGAGCAGTAGGGGCTCACTTTGTTaGCTGGGCTGGGGTGCAGTG +
Preference number: 4 (lower is better)
Translates to: RAWPGAQHGSRAANGESSRGSLC*LGWGAV
Trigger: CACTGCACCCCAGCCCAGGCAACAAAGTGAGCCCCT...ACTGCTCTCCCCATTGGCAGCACGGGACCCATGCTGTGCCCCCGGCCAGGCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000216177.8
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp CGGGCTCCAAGCTGCAGGGTCTCCACGGAGATTGGCAGGGCCTCTTCCCGCTGGAGCCTTGGACGGGGCTaGGCCCAAATGTGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: RAPSCRVSTEIGRASSRWSLGRG*AQMWAL
Trigger: CAGAGCCCACATTTGGGCCCAGCCCCGTCCAAGGCT...CCAGCGGGAAGAGGCCCTGCCAATCTCCGTGGAGACCCTGCAGCTTGGAGCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp ATGCTGACAGGCTGCGCCCCAAGGAACGGGCTCCAAGCTGCAGGGTCTCCACGGGCCGGGATGCAGCCTTaGACGGGGCTGGGCCCAAAT +
Preference number: 4 (lower is better)
Translates to: MLTGCAPRNGLQAAGSPRAGMQP*TGLGPN
Trigger: ATTTGGGCCCAGCCCCGTCCAAGGCTGCATCCCGGC...CCGTGGAGACCCTGCAGCTTGGAGCCCGTTCCTTGGGGCGCAGCCTGTCAGCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp CAGGCTGCGCCCCAAGGAACGGGCTCCAAGCTGCAGGGTCTCCACGGAGATTGGGCCGGGATGCAGCCTTaGACGGGGCTGGGCCCAAAT +
Preference number: 4 (lower is better)
Translates to: QAAPQGTGSKLQGLHGDWAGMQP*TGLGPN
Trigger: ATTTGGGCCCAGCCCCGTCCAAGGCTGCATCCCGGC...CCAATCTCCGTGGAGACCCTGCAGCTTGGAGCCCGTTCCTTGGGGCGCAGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp GCCACTGGGCCCAACAGAAGCACCCACAGCTGGGATCCTGAAAAGACCTGGACCAGGCGCGGGGCTCGCTaGCGCAGGCATTCGGTGGCG +
Preference number: 4 (lower is better)
Translates to: ATGPNRSTHSWDPEKTWTRRGAR*RRHSVA
Trigger: CGCCACCGAATGCCTGCGCCAGCGAGCCCCGCGCCT...GGTCCAGGTCTTTTCAGGATCCCAGCTGTGGGTGCTTCTGTTGGGCCCAGTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp ACCTTCTGCAGGAATGAGGCTGTGGGGATAGCAGGGGCCACTGGGCCCAACAGAAGGCGCGGGGCTCGCTaGCGCAGGCATTCGGTGGCG +
Preference number: 4 (lower is better)
Translates to: TFCRNEAVGIAGATGPNRRRGAR*RRHSVA
Trigger: CGCCACCGAATGCCTGCGCCAGCGAGCCCCGCGCCT...TCTGTTGGGCCCAGTGGCCCCTGCTATCCCCACAGCCTCATTCCTGCAGAAGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp AGCTGCAGGGTCTCCACGGAGATTGGCAGGGCCTCTTCCCGCTGGGGCAGATGTCACCAGTCACTGGGCTaGCCCTGCTCGGCCCCCTCA +
Preference number: 4 (lower is better)
Translates to: SCRVSTEIGRASSRWGRCHQSLG*PCSAPS
Trigger: TGAGGGGGCCGAGCAGGGCCAGCCCAGTGACTGGTG...ACATCTGCCCCAGCGGGAAGAGGCCCTGCCAATCTCCGTGGAGACCCTGCAGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp CGGGCTCCAAGCTGCAGGGTCTCCACGGAGATTGGCAGGGCCTCTTCCCGCTGGGGAGGGCAGGTGACCTaGGTACACAGTGACCGGGGA +
Preference number: 4 (lower is better)
Translates to: RAPSCRVSTEIGRASSRWGGQVT*VHSDRG
Trigger: TCCCCGGTCACTGTGTACCCAGGTCACCTGCCCTCC...CCAGCGGGAAGAGGCCCTGCCAATCTCCGTGGAGACCCTGCAGCTTGGAGCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp AGGGCCTGGCCGGGGGCACAGCATGGGTCCCGTGCTGCCAATGGGGAGAGCAGTGATAGCAGGGGCCACTaGGCCCAACAGAAGCACCCA +
Preference number: 4 (lower is better)
Translates to: RAWPGAQHGSRAANGESSDSRGH*AQQKHP
Trigger: TGGGTGCTTCTGTTGGGCCCAGTGGCCCCTGCTATC...ACTGCTCTCCCCATTGGCAGCACGGGACCCATGCTGTGCCCCCGGCCAGGCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp AGCTGCAGGGTCTCCACGGAGATTGGCAGGGCCTCTTCCCGCTGGGGCAGATGTGCCGGGGGCACAGCATaGGTCCCGTGCTGCCAATGG +
Preference number: 4 (lower is better)
Translates to: SCRVSTEIGRASSRWGRCAGGTA*VPCCQW
Trigger: CCATTGGCAGCACGGGACCCATGCTGTGCCCCCGGC...ACATCTGCCCCAGCGGGAAGAGGCCCTGCCAATCTCCGTGGAGACCCTGCAGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp AGGGCCTGGCCGGGGGCACAGCATGGGTCCCGTGCTGCCAATGGGGAGAGCAGTTGGGCTGGGGTGCAGTaGCGTGATCACGGTTCACTG +
Preference number: 4 (lower is better)
Translates to: RAWPGAQHGSRAANGESSWAGVQ*RDHGSL
Trigger: CAGTGAACCGTGATCACGCCACTGCACCCCAGCCCA...ACTGCTCTCCCCATTGGCAGCACGGGACCCATGCTGTGCCCCCGGCCAGGCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000216177.8
ENST00000593866.5
ENST00000597664.6
CDS-3UTR TCA 90 bp GTGACCTGGGTACACAGTGACCGGGGACATGCTGACAGGCTGCGCCCCAAGGAAGGAAGGGTCACTCCGTaGCCCGGGATAGGGCCGGGA +
Preference number: 4 (lower is better)
Translates to: VTWVHSDRGHADRLRPKEGRVTP*PGIGPG
Trigger: TCCCGGCCCTATCCCGGGTCACGGAGTGACCCTTCC...TTCCTTGGGGCGCAGCCTGTCAGCATGTCCCCGGTCACTGTGTACCCAGGTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR TCA 90 bp ACTGGGCCCAACAGAAGCACCCACAGCTGGGATCCTGAAAAGACCTGGACCCCCGTGGACCGGGCGGGGTaGTCGGGACGAGGAAGGGTC +
Preference number: 4 (lower is better)
Translates to: TGPNRSTHSWDPEKTWTPVDRAG*SGRGRV
Trigger: GACCCTTCCTCGTCCCGATCACCCCGCCCGGTCCAC...GGGGGTCCAGGTCTTTTCAGGATCCCAGCTGTGGGTGCTTCTGTTGGGCCCAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR TCA 90 bp CGGGCTCCAAGCTGCAGGGTCTCCACGGAGATTGGCAGGGCCTCTTCCCGCTGGCAATGGGGAGAGCAGTaGCTCGTGGAGAGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: RAPSCRVSTEIGRASSRWQWGEQ*LVERPE
Trigger: CTCTGGCCTCTCCACGAGTCACTGCTCTCCCCATTG...CCAGCGGGAAGAGGCCCTGCCAATCTCCGTGGAGACCCTGCAGCTTGGAGCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR TCA 90 bp CAGGCTGCGCCCCAAGGAACGGGCTCCAAGCTGCAGGGTCTCCACGGAGATTGGTGGGGTGCAGTGGCGTaGTCACGGTTCACTGCAGCC +
Preference number: 4 (lower is better)
Translates to: QAAPQGTGSKLQGLHGDWWGAVA*SRFTAA
Trigger: GGCTGCAGTGAACCGTGATCACGCCACTGCACCCCA...CCAATCTCCGTGGAGACCCTGCAGCTTGGAGCCCGTTCCTTGGGGCGCAGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216177.8
ENST00000593866.5
ENST00000597664.6
CDS-3UTR GCA 90 bp GTGACCTGGGTACACAGTGACCGGGGACATGCTGACAGGCTGCGCCCCAAGGAAGGGATAGGGCCGGGATaGAGCCTTGGACGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: VTWVHSDRGHADRLRPKEGIGPG*SLGRGW
Trigger: CCAGCCCCGTCCAAGGCTGCATCCCGGCCCTATCCC...TTCCTTGGGGCGCAGCCTGTCAGCATGTCCCCGGTCACTGTGTACCCAGGTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR GCA 90 bp AGCTGCAGGGTCTCCACGGAGATTGGCAGGGCCTCTTCCCGCTGGGGCAGATGTACGAGGAACCGTAGATaGGGCGGGCGCCCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: SCRVSTEIGRASSRWGRCTRNRR*GGRPGG
Trigger: TCCTCCAGGGCGCCCGCCGCATCTACGGTTCCTCGT...ACATCTGCCCCAGCGGGAAGAGGCCCTGCCAATCTCCGTGGAGACCCTGCAGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR GCA 90 bp AGGCTGCGCCCCAAGGAACGGGCTCCAAGCTGCAGGGTCTCCACGGAGATTGGCAGGCCGGGTGCAGGATaGTTAGGCTCAGCCGCTCCA +
Preference number: 4 (lower is better)
Translates to: RLRPKERAPSCRVSTEIGRPGAG*LGSAAP
Trigger: TGGAGCGGCTGAGCCTAAGCATCCTGCACCCGGCCT...GCCAATCTCCGTGGAGACCCTGCAGCTTGGAGCCCGTTCCTTGGGGCGCAGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216177.8
ENST00000597664.6
CDS-3UTR GCA 90 bp AGGGCCTGGCCGGGGGCACAGCATGGGTCCCGTGCTGCCAATGGGGAGAGCAGTACTCGAAGGGCAGTGTaGAGGGTAGCAGCAGGTACG +
Preference number: 4 (lower is better)
Translates to: RAWPGAQHGSRAANGESSTRRAV*RVAAGT
Trigger: CGTACCTGCTGCTACCCTGCACACTGCCCTTCGAGT...ACTGCTCTCCCCATTGGCAGCACGGGACCCATGCTGTGCCCCCGGCCAGGCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR GCA 90 bp AGGCTGCGCCCCAAGGAACGGGCTCCAAGCTGCAGGGTCTCCACGGAGATTGGCCCCTGGCATCCTCTCTaGCCCAGGTACAGGCACAGC +
Preference number: 4 (lower is better)
Translates to: RLRPKERAPSCRVSTEIGPWHPL*PRYRHS
Trigger: GCTGTGCCTGTACCTGGGGCAGAGAGGATGCCAGGG...GCCAATCTCCGTGGAGACCCTGCAGCTTGGAGCCCGTTCCTTGGGGCGCAGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR GCA 90 bp CGGGCTCCAAGCTGCAGGGTCTCCACGGAGATTGGCAGGGCCTCTTCCCGCTGGTTGCCTGGGCTGGGGTaGAGTGGCGTGATCACGGTT +
Preference number: 4 (lower is better)
Translates to: RAPSCRVSTEIGRASSRWLPGLG*SGVITV
Trigger: AACCGTGATCACGCCACTGCACCCCAGCCCAGGCAA...CCAGCGGGAAGAGGCCCTGCCAATCTCCGTGGAGACCCTGCAGCTTGGAGCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216177.8
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp CAGGCTGCGCCCCAAGGAACGGGCTCCAAGCTGCAGGGTCTCCACGGAGATTGGAGCCTTGGACGGGGCTaGGCCCAAATGTGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: QAAPQGTGSKLQGLHGDWSLGRG*AQMWAL
Trigger: CAGAGCCCACATTTGGGCCCAGCCCCGTCCAAGGCT...CCAATCTCCGTGGAGACCCTGCAGCTTGGAGCCCGTTCCTTGGGGCGCAGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp ATGCTGACAGGCTGCGCCCCAAGGAACGGGCTCCAAGCTGCAGGGTCTCCACGGTCCGTCAGCCGGGGCTaGGGGTTCCTTAGACACCAG +
Preference number: 4 (lower is better)
Translates to: MLTGCAPRNGLQAAGSPRSVSRG*GFLRHQ
Trigger: CTGGTGTCTAAGGAACCCCCAGCCCCGGCTGACGGA...CCGTGGAGACCCTGCAGCTTGGAGCCCGTTCCTTGGGGCGCAGCCTGTCAGCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp GTGCTCCGTGGGCAGCTCCACGGCAGAACAGGAGCCCCTCTCCCCAGCAATGCTTCCGTCAGCCGGGGCTaGGGGTTCCTTAGACACCAG +
Preference number: 4 (lower is better)
Translates to: VLRGQLHGRTGAPLPSNASVSRG*GFLRHQ
Trigger: CTGGTGTCTAAGGAACCCCCAGCCCCGGCTGACGGA...AGCATTGCTGGGGAGAGGGGCTCCTGTTCTGCCGTGGAGCTGCCCACGGAGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp GCCCCAAGGAACGGGCTCCAAGCTGCAGGGTCTCCACGGAGATTGGCAGGGCCTAGCGGGCCCACCGGCTaGGATCCCTCGTACATGCTT +
Preference number: 4 (lower is better)
Translates to: APRNGLQAAGSPRRLAGPSGPTG*DPSYML
Trigger: AAGCATGTACGAGGGATCCCAGCCGGTGGGCCCGCT...AGGCCCTGCCAATCTCCGTGGAGACCCTGCAGCTTGGAGCCCGTTCCTTGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp GGGTCTCCACGGAGATTGGCAGGGCCTCTTCCCGCTGGGGCAGATGTGGGCACACTCAGGCCTGGTGGGTaGGCCCGAGCTCCTCTCTAT +
Preference number: 4 (lower is better)
Translates to: GSPRRLAGPLPAGADVGTLRPGG*ARAPLY
Trigger: ATAGAGAGGAGCTCGGGCCCACCCACCAGGCCTGAG...TGTGCCCACATCTGCCCCAGCGGGAAGAGGCCCTGCCAATCTCCGTGGAGACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp GCCCCAAGGAACGGGCTCCAAGCTGCAGGGTCTCCACGGAGATTGGCAGGGCCTCTCAGGCCTGGTGGGTaGGCCCGAGCTCCTCTCTAT +
Preference number: 4 (lower is better)
Translates to: APRNGLQAAGSPRRLAGPLRPGG*ARAPLY
Trigger: ATAGAGAGGAGCTCGGGCCCACCCACCAGGCCTGAG...AGGCCCTGCCAATCTCCGTGGAGACCCTGCAGCTTGGAGCCCGTTCCTTGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp GGGCCACTGGGCCCAACAGAAGCACCCACAGCTGGGATCCTGAAAAGACCTGGACCCCCTCAGGCCTGGTaGGTGGGCCCGAGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: GPLGPTEAPTAGILKRPGPPQAW*VGPSSS
Trigger: AGAGGAGCTCGGGCCCACCCACCAGGCCTGAGGGGG...TCCAGGTCTTTTCAGGATCCCAGCTGTGGGTGCTTCTGTTGGGCCCAGTGGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp ATGCTGACAGGCTGCGCCCCAAGGAACGGGCTCCAAGCTGCAGGGTCTCCACGGCCGCTGGGGCAGATGTaGGCACACAGGACAAAGGCC +
Preference number: 4 (lower is better)
Translates to: MLTGCAPRNGLQAAGSPRPLGQM*AHRTKA
Trigger: GGCCTTTGTCCTGTGTGCCCACATCTGCCCCAGCGG...CCGTGGAGACCCTGCAGCTTGGAGCCCGTTCCTTGGGGCGCAGCCTGTCAGCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp CAGGCTGCGCCCCAAGGAACGGGCTCCAAGCTGCAGGGTCTCCACGGAGATTGGGGAGGGCAGGTGACCTaGGTACACAGTGACCGGGGA +
Preference number: 4 (lower is better)
Translates to: QAAPQGTGSKLQGLHGDWGGQVT*VHSDRG
Trigger: TCCCCGGTCACTGTGTACCCAGGTCACCTGCCCTCC...CCAATCTCCGTGGAGACCCTGCAGCTTGGAGCCCGTTCCTTGGGGCGCAGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp CGGGGGCACAGCATGGGTCCCGTGCTGCCAATGGGGAGAGCAGTGACTCGTGGAAGGACTGAGAAAGTCTaGGGGGAGCACCCCCACCCC +
Preference number: 4 (lower is better)
Translates to: RGHSMGPVLPMGRAVTRGRTEKV*GEHPHP
Trigger: GGGGTGGGGGTGCTCCCCCCAGACTTTCTCAGTCCT...TCCACGAGTCACTGCTCTCCCCATTGGCAGCACGGGACCCATGCTGTGCCCCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR TCA 90 bp CCTGGGTACACAGTGACCGGGGACATGCTGACAGGCTGCGCCCCAAGGAACGGGAGACCAAGGCCTGGATaGGCTCATCGCAGGTGGCGA +
Preference number: 4 (lower is better)
Translates to: PGYTVTGDMLTGCAPRNGRPRPG*AHRRWR
Trigger: TCGCCACCTGCGATGAGCTCATCCAGGCCTTGGTCT...CCCGTTCCTTGGGGCGCAGCCTGTCAGCATGTCCCCGGTCACTGTGTACCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216177.8
ENST00000597664.6
CDS-3UTR TCA 90 bp CGGGCTCCAAGCTGCAGGGTCTCCACGGAGATTGGCAGGGCCTCTTCCCGCTGGAGCCTCCAGCTCTGGTaGGAGCTGCTCAAAGTTGGG +
Preference number: 4 (lower is better)
Translates to: RAPSCRVSTEIGRASSRWSLQLW*ELLKVG
Trigger: CCCAACTTTGAGCAGCTCTCACCAGAGCTGGAGGCT...CCAGCGGGAAGAGGCCCTGCCAATCTCCGTGGAGACCCTGCAGCTTGGAGCCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR TCA 90 bp CGGGCTCCAAGCTGCAGGGTCTCCACGGAGATTGGCAGGGCCTCTTCCCGCTGGCCGAGCTCCTCTCTATaGGGAGCTATCTGGGGTTGG +
Preference number: 4 (lower is better)
Translates to: RAPSCRVSTEIGRASSRWPSSSL*GAIWGW
Trigger: CCAACCCCAGATAGCTCCTCATAGAGAGGAGCTCGG...CCAGCGGGAAGAGGCCCTGCCAATCTCCGTGGAGACCCTGCAGCTTGGAGCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR TCA 90 bp ATGCTGACAGGCTGCGCCCCAAGGAACGGGCTCCAAGCTGCAGGGTCTCCACGGAAGAGGGAGGGCAGGTaGCCTGGGTACACAGTGACC +
Preference number: 4 (lower is better)
Translates to: MLTGCAPRNGLQAAGSPRKREGR*PGYTVT
Trigger: GGTCACTGTGTACCCAGGTCACCTGCCCTCCCTCTT...CCGTGGAGACCCTGCAGCTTGGAGCCCGTTCCTTGGGGCGCAGCCTGTCAGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR TCA 90 bp GGGTCTCCACGGAGATTGGCAGGGCCTCTTCCCGCTGGGGCAGATGTGGGCACAAAGAGGGAGGGCAGGTaGCCTGGGTACACAGTGACC +
Preference number: 4 (lower is better)
Translates to: GSPRRLAGPLPAGADVGTKREGR*PGYTVT
Trigger: GGTCACTGTGTACCCAGGTCACCTGCCCTCCCTCTT...TGTGCCCACATCTGCCCCAGCGGGAAGAGGCCCTGCCAATCTCCGTGGAGACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR TCA 90 bp CCTGGGTACACAGTGACCGGGGACATGCTGACAGGCTGCGCCCCAAGGAACGGGCAATGGGGAGAGCAGTaGCTCGTGGAGAGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: PGYTVTGDMLTGCAPRNGQWGEQ*LVERPE
Trigger: CTCTGGCCTCTCCACGAGTCACTGCTCTCCCCATTG...CCCGTTCCTTGGGGCGCAGCCTGTCAGCATGTCCCCGGTCACTGTGTACCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR TCA 90 bp CAAGGAACGGGCTCCAAGCTGCAGGGTCTCCACGGAGATTGGCAGGGCCTCTTCGGAAGGGCGACACCGTaGTGGTGGAGGGGCAGTCGA +
Preference number: 4 (lower is better)
Translates to: QGTGSKLQGLHGDWQGLFGRATP*WWRGSR
Trigger: TCGACTGCCCCTCCACCATCACGGTGTCGCCCTTCC...GAAGAGGCCCTGCCAATCTCCGTGGAGACCCTGCAGCTTGGAGCCCGTTCCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381198.6
ENST00000593866.5
CDS-3UTR TCA 90 bp GTGACCTGGGTACACAGTGACCGGGGACATGCTGACAGGCTGCGCCCCAAGGAAGGAAGGGCGACACCGTaGTGGTGGAGGGGCAGTCGA +
Preference number: 4 (lower is better)
Translates to: VTWVHSDRGHADRLRPKEGRATP*WWRGSR
Trigger: TCGACTGCCCCTCCACCATCACGGTGTCGCCCTTCC...TTCCTTGGGGCGCAGCCTGTCAGCATGTCCCCGGTCACTGTGTACCCAGGTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000381198.6
ENST00000593866.5
CDS-3UTR GCA 90 bp CAGGCTGCGCCCCAAGGAACGGGCTCCAAGCTGCAGGGTCTCCACGGAGATTGGGCAGACGATGCTGACTaGGTTGAGCGCCCCAGACGA +
Preference number: 4 (lower is better)
Translates to: QAAPQGTGSKLQGLHGDWADDAD*VERPRR
Trigger: TCGTCTGGGGCGCTCAACGCAGTCAGCATCGTCTGC...CCAATCTCCGTGGAGACCCTGCAGCTTGGAGCCCGTTCCTTGGGGCGCAGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR GCA 90 bp ACAGTGACCGGGGACATGCTGACAGGCTGCGCCCCAAGGAACGGGCTCCAAGCTAGGCCGGGTGCAGGATaGTTAGGCTCAGCCGCTCCA +
Preference number: 4 (lower is better)
Translates to: TVTGDMLTGCAPRNGLQARPGAG*LGSAAP
Trigger: TGGAGCGGCTGAGCCTAAGCATCCTGCACCCGGCCT...AGCTTGGAGCCCGTTCCTTGGGGCGCAGCCTGTCAGCATGTCCCCGGTCACTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216177.8
ENST00000597664.6
CDS-3UTR GCA 90 bp AGCTGCAGGGTCTCCACGGAGATTGGCAGGGCCTCTTCCCGCTGGGGCAGATGTGACATGCTGACAGGCTaGGCCCCAAGGAACGGGCTC +
Preference number: 4 (lower is better)
Translates to: SCRVSTEIGRASSRWGRCDMLTG*APRNGL
Trigger: GAGCCCGTTCCTTGGGGCGCAGCCTGTCAGCATGTC...ACATCTGCCCCAGCGGGAAGAGGCCCTGCCAATCTCCGTGGAGACCCTGCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR GCA 90 bp ATGCTGACAGGCTGCGCCCCAAGGAACGGGCTCCAAGCTGCAGGGTCTCCACGGACCCCCAAGGGCCGCTaGAGGACTGAGAAAGTCTGG +
Preference number: 4 (lower is better)
Translates to: MLTGCAPRNGLQAAGSPRTPKGR*RTEKVW
Trigger: CCAGACTTTCTCAGTCCTGCAGCGGCCCTTGGGGGT...CCGTGGAGACCCTGCAGCTTGGAGCCCGTTCCTTGGGGCGCAGCCTGTCAGCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR GCA 90 bp GTGCTCCGTGGGCAGCTCCACGGCAGAACAGGAGCCCCTCTCCCCAGCAATGCTACCCCCAAGGGCCGCTaGAGGACTGAGAAAGTCTGG +
Preference number: 4 (lower is better)
Translates to: VLRGQLHGRTGAPLPSNATPKGR*RTEKVW
Trigger: CCAGACTTTCTCAGTCCTGCAGCGGCCCTTGGGGGT...AGCATTGCTGGGGAGAGGGGCTCCTGTTCTGCCGTGGAGCTGCCCACGGAGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR GCA 90 bp CGGGGGCACAGCATGGGTCCCGTGCTGCCAATGGGGAGAGCAGTGACTCGTGGATTGCCTGGGCTGGGGTaGAGTGGCGTGATCACGGTT +
Preference number: 4 (lower is better)
Translates to: RGHSMGPVLPMGRAVTRGLPGLG*SGVITV
Trigger: AACCGTGATCACGCCACTGCACCCCAGCCCAGGCAA...TCCACGAGTCACTGCTCTCCCCATTGGCAGCACGGGACCCATGCTGTGCCCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000216177.8
ENST00000593866.5
ENST00000597664.6
CDS-3UTR GCA 90 bp CGGGGGCACAGCATGGGTCCCGTGCTGCCAATGGGGAGAGCAGTGACTCGTGGAAGGGGCTCACTTTGTTaGCTGGGCTGGGGTGCAGTG +
Preference number: 4 (lower is better)
Translates to: RGHSMGPVLPMGRAVTRGRGSLC*LGWGAV
Trigger: CACTGCACCCCAGCCCAGGCAACAAAGTGAGCCCCT...TCCACGAGTCACTGCTCTCCCCATTGGCAGCACGGGACCCATGCTGTGCCCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000216177.8
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp GGGCCACTGGGCCCAACAGAAGCACCCACAGCTGGGATCCTGAAAAGACCTGGACCTCTAAGAAGCCCATaGCGGGTGGACCGGGCGGGG +
Preference number: 4 (lower is better)
Translates to: GPLGPTEAPTAGILKRPGPLRSP*RVDRAG
Trigger: CCCCGCCCGGTCCACCCGCCATGGGCTTCTTAGAGG...TCCAGGTCTTTTCAGGATCCCAGCTGTGGGTGCTTCTGTTGGGCCCAGTGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp CTTTCTCAATCTTCTGTGAGGTGCTCCGTGGGCAGCTCCACGGCAGAACAGGAGAGGCGCGGGGCTCGCTaGCGCAGGCATTCGGTGGCG +
Preference number: 4 (lower is better)
Translates to: LSQSSVRCSVGSSTAEQERRGAR*RRHSVA
Trigger: CGCCACCGAATGCCTGCGCCAGCGAGCCCCGCGCCT...CTCCTGTTCTGCCGTGGAGCTGCCCACGGAGCACCTCACAGAAGATTGAGAAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp ATGCTGACAGGCTGCGCCCCAAGGAACGGGCTCCAAGCTGCAGGGTCTCCACGGTTGGGGGAGGTGCTCTaGGGGCAGATGTCCACTGTC +
Preference number: 4 (lower is better)
Translates to: MLTGCAPRNGLQAAGSPRLGEVL*GQMSTV
Trigger: GACAGTGGACATCTGCCCCCAGAGCACCTCCCCCAA...CCGTGGAGACCCTGCAGCTTGGAGCCCGTTCCTTGGGGCGCAGCCTGTCAGCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp CCTGGGTACACAGTGACCGGGGACATGCTGACAGGCTGCGCCCCAAGGAACGGGTTGGGGGAGGTGCTCTaGGGGCAGATGTCCACTGTC +
Preference number: 4 (lower is better)
Translates to: PGYTVTGDMLTGCAPRNGLGEVL*GQMSTV
Trigger: GACAGTGGACATCTGCCCCCAGAGCACCTCCCCCAA...CCCGTTCCTTGGGGCGCAGCCTGTCAGCATGTCCCCGGTCACTGTGTACCCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp ATGCTGACAGGCTGCGCCCCAAGGAACGGGCTCCAAGCTGCAGGGTCTCCACGGGCTGGGCCTTGGTCCTaGAGAAAACCTCGAGGGCCA +
Preference number: 4 (lower is better)
Translates to: MLTGCAPRNGLQAAGSPRAGPWS*RKPRGP
Trigger: TGGCCCTCGAGGTTTTCTCCAGGACCAAGGCCCAGC...CCGTGGAGACCCTGCAGCTTGGAGCCCGTTCCTTGGGGCGCAGCCTGTCAGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp GTGCTCCGTGGGCAGCTCCACGGCAGAACAGGAGCCCCTCTCCCCAGCAATGCTGCTGGGCCTTGGTCCTaGAGAAAACCTCGAGGGCCA +
Preference number: 4 (lower is better)
Translates to: VLRGQLHGRTGAPLPSNAAGPWS*RKPRGP
Trigger: TGGCCCTCGAGGTTTTCTCCAGGACCAAGGCCCAGC...AGCATTGCTGGGGAGAGGGGCTCCTGTTCTGCCGTGGAGCTGCCCACGGAGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp ACTGGGCCCAACAGAAGCACCCACAGCTGGGATCCTGAAAAGACCTGGACCCCCCACCAGTCACTGGGCTaGCCCTGCTCGGCCCCCTCA +
Preference number: 4 (lower is better)
Translates to: TGPNRSTHSWDPEKTWTPHQSLG*PCSAPS
Trigger: TGAGGGGGCCGAGCAGGGCCAGCCCAGTGACTGGTG...GGGGGTCCAGGTCTTTTCAGGATCCCAGCTGTGGGTGCTTCTGTTGGGCCCAGT
64% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp GGGCCACTGGGCCCAACAGAAGCACCCACAGCTGGGATCCTGAAAAGACCTGGAAGGGACACCAGTCACTaGGCTGGCCCTGCTCGGCCC +
Preference number: 4 (lower is better)
Translates to: GPLGPTEAPTAGILKRPGRDTSH*AGPARP
Trigger: GGGCCGAGCAGGGCCAGCCCAGTGACTGGTGTCCCT...TCCAGGTCTTTTCAGGATCCCAGCTGTGGGTGCTTCTGTTGGGCCCAGTGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp ACAGTGACCGGGGACATGCTGACAGGCTGCGCCCCAAGGAACGGGCTCCAAGCTAGGACTGAGAAAGTCTaGGGGGAGCACCCCCACCCC +
Preference number: 4 (lower is better)
Translates to: TVTGDMLTGCAPRNGLQARTEKV*GEHPHP
Trigger: GGGGTGGGGGTGCTCCCCCCAGACTTTCTCAGTCCT...AGCTTGGAGCCCGTTCCTTGGGGCGCAGCCTGTCAGCATGTCCCCGGTCACTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp CAGGCTGCGCCCCAAGGAACGGGCTCCAAGCTGCAGGGTCTCCACGGAGATTGGGATAGCAGGGGCCACTaGGCCCAACAGAAGCACCCA +
Preference number: 4 (lower is better)
Translates to: QAAPQGTGSKLQGLHGDWDSRGH*AQQKHP
Trigger: TGGGTGCTTCTGTTGGGCCCAGTGGCCCCTGCTATC...CCAATCTCCGTGGAGACCCTGCAGCTTGGAGCCCGTTCCTTGGGGCGCAGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp AGGCTGCGCCCCAAGGAACGGGCTCCAAGCTGCAGGGTCTCCACGGAGATTGGCTGGGCTGGGGTGCAGTaGCGTGATCACGGTTCACTG +
Preference number: 4 (lower is better)
Translates to: RLRPKERAPSCRVSTEIGWAGVQ*RDHGSL
Trigger: CAGTGAACCGTGATCACGCCACTGCACCCCAGCCCA...GCCAATCTCCGTGGAGACCCTGCAGCTTGGAGCCCGTTCCTTGGGGCGCAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216177.8
ENST00000593866.5
ENST00000597664.6
CDS-3UTR TCA 90 bp CCCTGGCATCCTCTCTGCCCCAGGTACAGGCACAGCTACGTCACAAACCTTCTGGGAAGGGTCACTCCGTaGCCCGGGATAGGGCCGGGA +
Preference number: 4 (lower is better)
Translates to: PWHPLCPRYRHSYVTNLLGRVTP*PGIGPG
Trigger: TCCCGGCCCTATCCCGGGTCACGGAGTGACCCTTCC...CAGAAGGTTTGTGACGTAGCTGTGCCTGTACCTGGGGCAGAGAGGATGCCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR TCA 90 bp CGGGCTCCAAGCTGCAGGGTCTCCACGGAGATTGGCAGGGCCTCTTCCCGCTGGAGGTGGCGAAGTCAGTaGCCAAGAAGTTGCGTCCGT +
Preference number: 4 (lower is better)
Translates to: RAPSCRVSTEIGRASSRWRWRSQ*PRSCVR
Trigger: ACGGACGCAACTTCTTGGTCACTGACTTCGCCACCT...CCAGCGGGAAGAGGCCCTGCCAATCTCCGTGGAGACCCTGCAGCTTGGAGCCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216177.8
ENST00000597664.6
CDS-3UTR TCA 90 bp ACAGTGACCGGGGACATGCTGACAGGCTGCGCCCCAAGGAACGGGCTCCAAGCTAGACCAAGGCCTGGATaGGCTCATCGCAGGTGGCGA +
Preference number: 4 (lower is better)
Translates to: TVTGDMLTGCAPRNGLQARPRPG*AHRRWR
Trigger: TCGCCACCTGCGATGAGCTCATCCAGGCCTTGGTCT...AGCTTGGAGCCCGTTCCTTGGGGCGCAGCCTGTCAGCATGTCCCCGGTCACTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216177.8
ENST00000597664.6
CDS-3UTR TCA 90 bp CCTGGGTACACAGTGACCGGGGACATGCTGACAGGCTGCGCCCCAAGGAACGGGGCACTGGTTCCTTGGTaGGTCCACGTCTCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: PGYTVTGDMLTGCAPRNGALVPW*VHVSPG
Trigger: TCCTGGAGAGACGTGGACTCACCAAGGAACCAGTGC...CCCGTTCCTTGGGGCGCAGCCTGTCAGCATGTCCCCGGTCACTGTGTACCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR TCA 90 bp CGGGGGCACAGCATGGGTCCCGTGCTGCCAATGGGGAGAGCAGTGACTCGTGGAGCACTGGTTCCTTGGTaGGTCCACGTCTCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: RGHSMGPVLPMGRAVTRGALVPW*VHVSPG
Trigger: TCCTGGAGAGACGTGGACTCACCAAGGAACCAGTGC...TCCACGAGTCACTGCTCTCCCCATTGGCAGCACGGGACCCATGCTGTGCCCCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR TCA 90 bp GTGCTCCGTGGGCAGCTCCACGGCAGAACAGGAGCCCCTCTCCCCAGCAATGCTAGCCTCCAGCTCTGGTaGGAGCTGCTCAAAGTTGGG +
Preference number: 4 (lower is better)
Translates to: VLRGQLHGRTGAPLPSNASLQLW*ELLKVG
Trigger: CCCAACTTTGAGCAGCTCTCACCAGAGCTGGAGGCT...AGCATTGCTGGGGAGAGGGGCTCCTGTTCTGCCGTGGAGCTGCCCACGGAGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR TCA 90 bp CCACGGAGATTGGCAGGGCCTCTTCCCGCTGGGGCAGATGTGGGCACACAGGACCCGAGCTCCTCTCTATaGGGAGCTATCTGGGGTTGG +
Preference number: 4 (lower is better)
Translates to: PRRLAGPLPAGADVGTQDPSSSL*GAIWGW
Trigger: CCAACCCCAGATAGCTCCTCATAGAGAGGAGCTCGG...GTCCTGTGTGCCCACATCTGCCCCAGCGGGAAGAGGCCCTGCCAATCTCCGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR TCA 90 bp GGCCAGAGCAGGAATCAAGGGACACCAGTCACTGGGCTGGCCCTGCTCGGCCCCAACCTTCTGCAGGAATaGGGCTGTGGGGATAGCAGG +
Preference number: 4 (lower is better)
Translates to: GQSRNQGTPVTGLALLGPNLLQE*GCGDSR
Trigger: CCTGCTATCCCCACAGCCTCATTCCTGCAGAAGGTT...GGGGCCGAGCAGGGCCAGCCCAGTGACTGGTGTCCCTTGATTCCTGCTCTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR GCA 90 bp GCCACTGGGCCCAACAGAAGCACCCACAGCTGGGATCCTGAAAAGACCTGGACCAGCGGGTCAGCGAAATaGCCAGCCGCTGGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: ATGPNRSTHSWDPEKTWTSGSAK*PAAGRP
Trigger: TGGCCTCCCAGCGGCTGGGCATTTCGCTGACCCGCT...GGTCCAGGTCTTTTCAGGATCCCAGCTGTGGGTGCTTCTGTTGGGCCCAGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216177.8
ENST00000597664.6
CDS-3UTR GCA 90 bp CTTTCTCAATCTTCTGTGAGGTGCTCCGTGGGCAGCTCCACGGCAGAACAGGAGTGTCCAGGCCCCGAGTaGCAGAAGCGGGCCCACCGG +
Preference number: 4 (lower is better)
Translates to: LSQSSVRCSVGSSTAEQECPGPE*QKRAHR
Trigger: CCGGTGGGCCCGCTTCTGGCACTCGGGGCCTGGACA...CTCCTGTTCTGCCGTGGAGCTGCCCACGGAGCACCTCACAGAAGATTGAGAAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR GCA 90 bp AGCTGCAGGGTCTCCACGGAGATTGGCAGGGCCTCTTCCCGCTGGGGCAGATGTTTCCTCAGCAGGCCCTaGATCCACCACAAGTCCGCC +
Preference number: 4 (lower is better)
Translates to: SCRVSTEIGRASSRWGRCFLSRP*IHHKSA
Trigger: GGCGGACTTGTGGTGGATGCAGGGCCTGCTGAGGAA...ACATCTGCCCCAGCGGGAAGAGGCCCTGCCAATCTCCGTGGAGACCCTGCAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR GCA 90 bp ATGCTGACAGGCTGCGCCCCAAGGAACGGGCTCCAAGCTGCAGGGTCTCCACGGGAACGGGCTCCAAGCTaGAGGGTCTCCACGGAGATT +
Preference number: 4 (lower is better)
Translates to: MLTGCAPRNGLQAAGSPRERAPS*RVSTEI
Trigger: AATCTCCGTGGAGACCCTGCAGCTTGGAGCCCGTTC...CCGTGGAGACCCTGCAGCTTGGAGCCCGTTCCTTGGGGCGCAGCCTGTCAGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR GCA 90 bp AGCTGCAGGGTCTCCACGGAGATTGGCAGGGCCTCTTCCCGCTGGGGCAGATGTACCCCCAAGGGCCGCTaGAGGACTGAGAAAGTCTGG +
Preference number: 4 (lower is better)
Translates to: SCRVSTEIGRASSRWGRCTPKGR*RTEKVW
Trigger: CCAGACTTTCTCAGTCCTGCAGCGGCCCTTGGGGGT...ACATCTGCCCCAGCGGGAAGAGGCCCTGCCAATCTCCGTGGAGACCCTGCAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR GCA 90 bp AGCTGCAGGGTCTCCACGGAGATTGGCAGGGCCTCTTCCCGCTGGGGCAGATGTAGGGGCTCACTTTGTTaGCTGGGCTGGGGTGCAGTG +
Preference number: 4 (lower is better)
Translates to: SCRVSTEIGRASSRWGRCRGSLC*LGWGAV
Trigger: CACTGCACCCCAGCCCAGGCAACAAAGTGAGCCCCT...ACATCTGCCCCAGCGGGAAGAGGCCCTGCCAATCTCCGTGGAGACCCTGCAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000216177.8
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp ACCTTCTGCAGGAATGAGGCTGTGGGGATAGCAGGGGCCACTGGGCCCAACAGAGCCGGGATGCAGCCTTaGACGGGGCTGGGCCCAAAT +
Preference number: 4 (lower is better)
Translates to: TFCRNEAVGIAGATGPNRAGMQP*TGLGPN
Trigger: ATTTGGGCCCAGCCCCGTCCAAGGCTGCATCCCGGC...TCTGTTGGGCCCAGTGGCCCCTGCTATCCCCACAGCCTCATTCCTGCAGAAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp CCACGGAGATTGGCAGGGCCTCTTCCCGCTGGGGCAGATGTGGGCACACAGGACGTGCAGACCAAGGCCTaGATGAGCTCATCGCAGGTG +
Preference number: 4 (lower is better)
Translates to: PRRLAGPLPAGADVGTQDVQTKA*MSSSQV
Trigger: CACCTGCGATGAGCTCATCCAGGCCTTGGTCTGCAC...GTCCTGTGTGCCCACATCTGCCCCAGCGGGAAGAGGCCCTGCCAATCTCCGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216177.8
ENST00000597664.6
CDS-3UTR CCA 90 bp GTGACCTGGGTACACAGTGACCGGGGACATGCTGACAGGCTGCGCCCCAAGGAAAGCGGGCCCACCGGCTaGGATCCCTCGTACATGCTT +
Preference number: 4 (lower is better)
Translates to: VTWVHSDRGHADRLRPKESGPTG*DPSYML
Trigger: AAGCATGTACGAGGGATCCCAGCCGGTGGGCCCGCT...TTCCTTGGGGCGCAGCCTGTCAGCATGTCCCCGGTCACTGTGTACCCAGGTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp CCTGGGTACACAGTGACCGGGGACATGCTGACAGGCTGCGCCCCAAGGAACGGGGGAGCTATCTGGGGTTaGAGGGGGCTTGTTTCCAGG +
Preference number: 4 (lower is better)
Translates to: PGYTVTGDMLTGCAPRNGGAIWG*RGLVSR
Trigger: CCTGGAAACAAGCCCCCTCCAACCCCAGATAGCTCC...CCCGTTCCTTGGGGCGCAGCCTGTCAGCATGTCCCCGGTCACTGTGTACCCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp CCCTGGCATCCTCTCTGCCCCAGGTACAGGCACAGCTACGTCACAAACCTTCTGCACCAGTCACTGGGCTaGCCCTGCTCGGCCCCCTCA +
Preference number: 4 (lower is better)
Translates to: PWHPLCPRYRHSYVTNLLHQSLG*PCSAPS
Trigger: TGAGGGGGCCGAGCAGGGCCAGCCCAGTGACTGGTG...CAGAAGGTTTGTGACGTAGCTGTGCCTGTACCTGGGGCAGAGAGGATGCCAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp GTGACCTGGGTACACAGTGACCGGGGACATGCTGACAGGCTGCGCCCCAAGGAACCGCTGGGGCAGATGTaGGCACACAGGACAAAGGCC +
Preference number: 4 (lower is better)
Translates to: VTWVHSDRGHADRLRPKEPLGQM*AHRTKA
Trigger: GGCCTTTGTCCTGTGTGCCCACATCTGCCCCAGCGG...TTCCTTGGGGCGCAGCCTGTCAGCATGTCCCCGGTCACTGTGTACCCAGGTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp CAAGGAACGGGCTCCAAGCTGCAGGGTCTCCACGGAGATTGGCAGGGCCTCTTCAGGGCCTCTTCCCGCTaGGGCAGATGTGGGCACACA +
Preference number: 4 (lower is better)
Translates to: QGTGSKLQGLHGDWQGLFRASSR*GRCGHT
Trigger: TGTGTGCCCACATCTGCCCCAGCGGGAAGAGGCCCT...GAAGAGGCCCTGCCAATCTCCGTGGAGACCCTGCAGCTTGGAGCCCGTTCCTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR TCA 90 bp GCCCCAAGGAACGGGCTCCAAGCTGCAGGGTCTCCACGGAGATTGGCAGGGCCTAGGTGGCGAAGTCAGTaGCCAAGAAGTTGCGTCCGT +
Preference number: 4 (lower is better)
Translates to: APRNGLQAAGSPRRLAGPRWRSQ*PRSCVR
Trigger: ACGGACGCAACTTCTTGGTCACTGACTTCGCCACCT...AGGCCCTGCCAATCTCCGTGGAGACCCTGCAGCTTGGAGCCCGTTCCTTGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216177.8
ENST00000597664.6
CDS-3UTR TCA 90 bp AGCTGCAGGGTCTCCACGGAGATTGGCAGGGCCTCTTCCCGCTGGGGCAGATGTCCGAGCTCCTCTCTATaGGGAGCTATCTGGGGTTGG +
Preference number: 4 (lower is better)
Translates to: SCRVSTEIGRASSRWGRCPSSSL*GAIWGW
Trigger: CCAACCCCAGATAGCTCCTCATAGAGAGGAGCTCGG...ACATCTGCCCCAGCGGGAAGAGGCCCTGCCAATCTCCGTGGAGACCCTGCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR TCA 90 bp CGGGGGCACAGCATGGGTCCCGTGCTGCCAATGGGGAGAGCAGTGACTCGTGGAAACCTTCTGCAGGAATaGGGCTGTGGGGATAGCAGG +
Preference number: 4 (lower is better)
Translates to: RGHSMGPVLPMGRAVTRGNLLQE*GCGDSR
Trigger: CCTGCTATCCCCACAGCCTCATTCCTGCAGAAGGTT...TCCACGAGTCACTGCTCTCCCCATTGGCAGCACGGGACCCATGCTGTGCCCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR GCA 90 bp GTGACCTGGGTACACAGTGACCGGGGACATGCTGACAGGCTGCGCCCCAAGGAAGCAGACGATGCTGACTaGGTTGAGCGCCCCAGACGA +
Preference number: 4 (lower is better)
Translates to: VTWVHSDRGHADRLRPKEADDAD*VERPRR
Trigger: TCGTCTGGGGCGCTCAACGCAGTCAGCATCGTCTGC...TTCCTTGGGGCGCAGCCTGTCAGCATGTCCCCGGTCACTGTGTACCCAGGTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR GCA 90 bp GTGACCTGGGTACACAGTGACCGGGGACATGCTGACAGGCTGCGCCCCAAGGAAGCATCCTGCAGCTGCTaGTTGACGTGCTCGATGGGC +
Preference number: 4 (lower is better)
Translates to: VTWVHSDRGHADRLRPKEASCSC*LTCSMG
Trigger: GCCCATCGAGCACGTCAAGCAGCAGCTGCAGGATGC...TTCCTTGGGGCGCAGCCTGTCAGCATGTCCCCGGTCACTGTGTACCCAGGTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216177.8
ENST00000597664.6
CDS-3UTR GCA 90 bp GGGTCTCCACGGAGATTGGCAGGGCCTCTTCCCGCTGGGGCAGATGTGGGCACAAGAGCATCCTGCAGCTaGTGCTTGACGTGCTCGATG +
Preference number: 4 (lower is better)
Translates to: GSPRRLAGPLPAGADVGTRASCS*CLTCSM
Trigger: CATCGAGCACGTCAAGCAGCAGCTGCAGGATGCTCT...TGTGCCCACATCTGCCCCAGCGGGAAGAGGCCCTGCCAATCTCCGTGGAGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216177.8
ENST00000597664.6
CDS-3UTR GCA 90 bp AGGCTGCGCCCCAAGGAACGGGCTCCAAGCTGCAGGGTCTCCACGGAGATTGGCAAGACGTTCAGCTCATaGAGGTTGGGGGAGGTGCTC +
Preference number: 4 (lower is better)
Translates to: RLRPKERAPSCRVSTEIGKTFSS*RLGEVL
Trigger: GAGCACCTCCCCCAACCTGCATGAGCTGAACGTCTT...GCCAATCTCCGTGGAGACCCTGCAGCTTGGAGCCCGTTCCTTGGGGCGCAGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR GCA 90 bp CAGGCTGCGCCCCAAGGAACGGGCTCCAAGCTGCAGGGTCTCCACGGAGATTGGAAGACGTTCAGCTCATaGAGGTTGGGGGAGGTGCTC +
Preference number: 4 (lower is better)
Translates to: QAAPQGTGSKLQGLHGDWKTFSS*RLGEVL
Trigger: GAGCACCTCCCCCAACCTGCATGAGCTGAACGTCTT...CCAATCTCCGTGGAGACCCTGCAGCTTGGAGCCCGTTCCTTGGGGCGCAGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR GCA 90 bp GTGCTCCGTGGGCAGCTCCACGGCAGAACAGGAGCCCCTCTCCCCAGCAATGCTCCAGGTAGCCTTGTCTaGAGTTGTCGGCCACTACCT +
Preference number: 4 (lower is better)
Translates to: VLRGQLHGRTGAPLPSNAPGSLV*SCRPLP
Trigger: AGGTAGTGGCCGACAACTGCAGACAAGGCTACCTGG...AGCATTGCTGGGGAGAGGGGCTCCTGTTCTGCCGTGGAGCTGCCCACGGAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR GCA 90 bp CGGGGGCACAGCATGGGTCCCGTGCTGCCAATGGGGAGAGCAGTGACTCGTGGACCAGGTAGCCTTGTCTaGAGTTGTCGGCCACTACCT +
Preference number: 4 (lower is better)
Translates to: RGHSMGPVLPMGRAVTRGPGSLV*SCRPLP
Trigger: AGGTAGTGGCCGACAACTGCAGACAAGGCTACCTGG...TCCACGAGTCACTGCTCTCCCCATTGGCAGCACGGGACCCATGCTGTGCCCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR GCA 90 bp GCCACTGGGCCCAACAGAAGCACCCACAGCTGGGATCCTGAAAAGACCTGGACCGACATGCTGACAGGCTaGGCCCCAAGGAACGGGCTC +
Preference number: 4 (lower is better)
Translates to: ATGPNRSTHSWDPEKTWTDMLTG*APRNGL
Trigger: GAGCCCGTTCCTTGGGGCGCAGCCTGTCAGCATGTC...GGTCCAGGTCTTTTCAGGATCCCAGCTGTGGGTGCTTCTGTTGGGCCCAGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp ACTGGGCCCAACAGAAGCACCCACAGCTGGGATCCTGAAAAGACCTGGACCCCCAGCCTTGGACGGGGCTaGGCCCAAATGTGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: TGPNRSTHSWDPEKTWTPSLGRG*AQMWAL
Trigger: CAGAGCCCACATTTGGGCCCAGCCCCGTCCAAGGCT...GGGGGTCCAGGTCTTTTCAGGATCCCAGCTGTGGGTGCTTCTGTTGGGCCCAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp CCCTGGCATCCTCTCTGCCCCAGGTACAGGCACAGCTACGTCACAAACCTTCTGGCCGGGATGCAGCCTTaGACGGGGCTGGGCCCAAAT +
Preference number: 4 (lower is better)
Translates to: PWHPLCPRYRHSYVTNLLAGMQP*TGLGPN
Trigger: ATTTGGGCCCAGCCCCGTCCAAGGCTGCATCCCGGC...CAGAAGGTTTGTGACGTAGCTGTGCCTGTACCTGGGGCAGAGAGGATGCCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp CTTTCTCAATCTTCTGTGAGGTGCTCCGTGGGCAGCTCCACGGCAGAACAGGAGCCTCTAAGAAGCCCATaGCGGGTGGACCGGGCGGGG +
Preference number: 4 (lower is better)
Translates to: LSQSSVRCSVGSSTAEQEPLRSP*RVDRAG
Trigger: CCCCGCCCGGTCCACCCGCCATGGGCTTCTTAGAGG...CTCCTGTTCTGCCGTGGAGCTGCCCACGGAGCACCTCACAGAAGATTGAGAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp GGGCCACTGGGCCCAACAGAAGCACCCACAGCTGGGATCCTGAAAAGACCTGGATCCGTCAGCCGGGGCTaGGGGTTCCTTAGACACCAG +
Preference number: 4 (lower is better)
Translates to: GPLGPTEAPTAGILKRPGSVSRG*GFLRHQ
Trigger: CTGGTGTCTAAGGAACCCCCAGCCCCGGCTGACGGA...TCCAGGTCTTTTCAGGATCCCAGCTGTGGGTGCTTCTGTTGGGCCCAGTGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp ACTGGGCCCAACAGAAGCACCCACAGCTGGGATCCTGAAAAGACCTGGACCCCCAGCGGGCCCACCGGCTaGGATCCCTCGTACATGCTT +
Preference number: 4 (lower is better)
Translates to: TGPNRSTHSWDPEKTWTPSGPTG*DPSYML
Trigger: AAGCATGTACGAGGGATCCCAGCCGGTGGGCCCGCT...GGGGGTCCAGGTCTTTTCAGGATCCCAGCTGTGGGTGCTTCTGTTGGGCCCAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp AGCTGCAGGGTCTCCACGGAGATTGGCAGGGCCTCTTCCCGCTGGGGCAGATGTGGAGCTATCTGGGGTTaGAGGGGGCTTGTTTCCAGG +
Preference number: 4 (lower is better)
Translates to: SCRVSTEIGRASSRWGRCGAIWG*RGLVSR
Trigger: CCTGGAAACAAGCCCCCTCCAACCCCAGATAGCTCC...ACATCTGCCCCAGCGGGAAGAGGCCCTGCCAATCTCCGTGGAGACCCTGCAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp CTTTCTCAATCTTCTGTGAGGTGCTCCGTGGGCAGCTCCACGGCAGAACAGGAGAGGGACACCAGTCACTaGGCTGGCCCTGCTCGGCCC +
Preference number: 4 (lower is better)
Translates to: LSQSSVRCSVGSSTAEQERDTSH*AGPARP
Trigger: GGGCCGAGCAGGGCCAGCCCAGTGACTGGTGTCCCT...CTCCTGTTCTGCCGTGGAGCTGCCCACGGAGCACCTCACAGAAGATTGAGAAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp ACTGGGCCCAACAGAAGCACCCACAGCTGGGATCCTGAAAAGACCTGGACCCCCCCGCTGGGGCAGATGTaGGCACACAGGACAAAGGCC +
Preference number: 4 (lower is better)
Translates to: TGPNRSTHSWDPEKTWTPPLGQM*AHRTKA
Trigger: GGCCTTTGTCCTGTGTGCCCACATCTGCCCCAGCGG...GGGGGTCCAGGTCTTTTCAGGATCCCAGCTGTGGGTGCTTCTGTTGGGCCCAGT
62% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp GGGCCACTGGGCCCAACAGAAGCACCCACAGCTGGGATCCTGAAAAGACCTGGAAGGGCCTCTTCCCGCTaGGGCAGATGTGGGCACACA +
Preference number: 4 (lower is better)
Translates to: GPLGPTEAPTAGILKRPGRASSR*GRCGHT
Trigger: TGTGTGCCCACATCTGCCCCAGCGGGAAGAGGCCCT...TCCAGGTCTTTTCAGGATCCCAGCTGTGGGTGCTTCTGTTGGGCCCAGTGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp GCCCCAAGGAACGGGCTCCAAGCTGCAGGGTCTCCACGGAGATTGGCAGGGCCTCCCCATCATCTCAGTTaGCTCCTCTGGTCTCTGACG +
Preference number: 4 (lower is better)
Translates to: APRNGLQAAGSPRRLAGPPHHLS*LLWSLT
Trigger: CGTCAGAGACCAGAGGAGCCAACTGAGATGATGGGG...AGGCCCTGCCAATCTCCGTGGAGACCCTGCAGCTTGGAGCCCGTTCCTTGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp GCCCCAAGGAACGGGCTCCAAGCTGCAGGGTCTCCACGGAGATTGGCAGGGCCTTCAAGGTTTCCTGAGTaGGGTAGATGCCGGGGGTCA +
Preference number: 4 (lower is better)
Translates to: APRNGLQAAGSPRRLAGPSRFPE*GRCRGS
Trigger: TGACCCCCGGCATCTACCCCACTCAGGAAACCTTGA...AGGCCCTGCCAATCTCCGTGGAGACCCTGCAGCTTGGAGCCCGTTCCTTGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp CCTGGGTACACAGTGACCGGGGACATGCTGACAGGCTGCGCCCCAAGGAACGGGTCAAGGTTTCCTGAGTaGGGTAGATGCCGGGGGTCA +
Preference number: 4 (lower is better)
Translates to: PGYTVTGDMLTGCAPRNGSRFPE*GRCRGS
Trigger: TGACCCCCGGCATCTACCCCACTCAGGAAACCTTGA...CCCGTTCCTTGGGGCGCAGCCTGTCAGCATGTCCCCGGTCACTGTGTACCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp CAGGCTGCGCCCCAAGGAACGGGCTCCAAGCTGCAGGGTCTCCACGGAGATTGGTCAAGGTTTCCTGAGTaGGGTAGATGCCGGGGGTCA +
Preference number: 4 (lower is better)
Translates to: QAAPQGTGSKLQGLHGDWSRFPE*GRCRGS
Trigger: TGACCCCCGGCATCTACCCCACTCAGGAAACCTTGA...CCAATCTCCGTGGAGACCCTGCAGCTTGGAGCCCGTTCCTTGGGGCGCAGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp GGCCAGAGCAGGAATCAAGGGACACCAGTCACTGGGCTGGCCCTGCTCGGCCCCAGAAGCACCCACAGCTaGGATCCTGAAAAGACCTGG +
Preference number: 4 (lower is better)
Translates to: GQSRNQGTPVTGLALLGPRSTHS*DPEKTW
Trigger: CCAGGTCTTTTCAGGATCCCAGCTGTGGGTGCTTCT...GGGGCCGAGCAGGGCCAGCCCAGTGACTGGTGTCCCTTGATTCCTGCTCTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp CTTTCTCAATCTTCTGTGAGGTGCTCCGTGGGCAGCTCCACGGCAGAACAGGAGGCCGGGGGCACAGCATaGGTCCCGTGCTGCCAATGG +
Preference number: 4 (lower is better)
Translates to: LSQSSVRCSVGSSTAEQEAGGTA*VPCCQW
Trigger: CCATTGGCAGCACGGGACCCATGCTGTGCCCCCGGC...CTCCTGTTCTGCCGTGGAGCTGCCCACGGAGCACCTCACAGAAGATTGAGAAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR TCA 90 bp CTTTCTCAATCTTCTGTGAGGTGCTCCGTGGGCAGCTCCACGGCAGAACAGGAGGGAAGGGCGACACCGTaGTGGTGGAGGGGCAGTCTG +
Preference number: 4 (lower is better)
Translates to: LSQSSVRCSVGSSTAEQEGRATP*WWRGSL
Trigger: CAGACTGCCCCTCCACCATCACGGTGTCGCCCTTCC...CTCCTGTTCTGCCGTGGAGCTGCCCACGGAGCACCTCACAGAAGATTGAGAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216177.8
ENST00000597664.6
CDS-3UTR TCA 90 bp ACCTTCTGCAGGAATGAGGCTGTGGGGATAGCAGGGGCCACTGGGCCCAACAGACAATGGGGAGAGCAGTaGCTCGTGGAGAGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: TFCRNEAVGIAGATGPNRQWGEQ*LVERPE
Trigger: CTCTGGCCTCTCCACGAGTCACTGCTCTCCCCATTG...TCTGTTGGGCCCAGTGGCCCCTGCTATCCCCACAGCCTCATTCCTGCAGAAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR GCA 90 bp CGGGCTCCAAGCTGCAGGGTCTCCACGGAGATTGGCAGGGCCTCTTCCCGCTGGCAAAGGGCAAGTTGTTaGTCAGAGCCCCATCGATGT +
Preference number: 4 (lower is better)
Translates to: RAPSCRVSTEIGRASSRWQRASC*SEPHRC
Trigger: ACATCGATGGGGCTCTGAGCAACAACTTGCCCTTTG...CCAGCGGGAAGAGGCCCTGCCAATCTCCGTGGAGACCCTGCAGCTTGGAGCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216177.8
ENST00000597664.6
CDS-3UTR GCA 90 bp GCCCCAAGGAACGGGCTCCAAGCTGCAGGGTCTCCACGGAGATTGGCAGGGCCTGGGATCCCTCGTACATaGTTTCTTCAGTGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: APRNGLQAAGSPRRLAGPGIPRT*FLQCSL
Trigger: GAGGCTGCACTGAAGAAAGCATGTACGAGGGATCCC...AGGCCCTGCCAATCTCCGTGGAGACCCTGCAGCTTGGAGCCCGTTCCTTGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR GCA 90 bp GTGCTCCGTGGGCAGCTCCACGGCAGAACAGGAGCCCCTCTCCCCAGCAATGCTGGGATCCCTCGTACATaGTTTCTTCAGTGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: VLRGQLHGRTGAPLPSNAGIPRT*FLQCSL
Trigger: GAGGCTGCACTGAAGAAAGCATGTACGAGGGATCCC...AGCATTGCTGGGGAGAGGGGCTCCTGTTCTGCCGTGGAGCTGCCCACGGAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR GCA 90 bp ACCTTCTGCAGGAATGAGGCTGTGGGGATAGCAGGGGCCACTGGGCCCAACAGATTCCTCAGCAGGCCCTaGATCCACCACAAGTCCGCC +
Preference number: 4 (lower is better)
Translates to: TFCRNEAVGIAGATGPNRFLSRP*IHHKSA
Trigger: GGCGGACTTGTGGTGGATGCAGGGCCTGCTGAGGAA...TCTGTTGGGCCCAGTGGCCCCTGCTATCCCCACAGCCTCATTCCTGCAGAAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR GCA 90 bp CAAGGAACGGGCTCCAAGCTGCAGGGTCTCCACGGAGATTGGCAGGGCCTCTTCGAACGGGCTCCAAGCTaGAGGGTCTCCACGGAGATT +
Preference number: 4 (lower is better)
Translates to: QGTGSKLQGLHGDWQGLFERAPS*RVSTEI
Trigger: AATCTCCGTGGAGACCCTGCAGCTTGGAGCCCGTTC...GAAGAGGCCCTGCCAATCTCCGTGGAGACCCTGCAGCTTGGAGCCCGTTCCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR GCA 90 bp GTGCTCCGTGGGCAGCTCCACGGCAGAACAGGAGCCCCTCTCCCCAGCAATGCTACGTCACAAACCTTCTaGAGGAATGAGGCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: VLRGQLHGRTGAPLPSNATSQTF*RNEAVG
Trigger: CCCCACAGCCTCATTCCTGCAGAAGGTTTGTGACGT...AGCATTGCTGGGGAGAGGGGCTCCTGTTCTGCCGTGGAGCTGCCCACGGAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR GCA 90 bp AGGCTGCGCCCCAAGGAACGGGCTCCAAGCTGCAGGGTCTCCACGGAGATTGGCACGTCACAAACCTTCTaGAGGAATGAGGCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: RLRPKERAPSCRVSTEIGTSQTF*RNEAVG
Trigger: CCCCACAGCCTCATTCCTGCAGAAGGTTTGTGACGT...GCCAATCTCCGTGGAGACCCTGCAGCTTGGAGCCCGTTCCTTGGGGCGCAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR GCA 90 bp CCCTGGCATCCTCTCTGCCCCAGGTACAGGCACAGCTACGTCACAAACCTTCTGCCCTGGCATCCTCTCTaGCCCAGGTACAGGCACAGC +
Preference number: 4 (lower is better)
Translates to: PWHPLCPRYRHSYVTNLLPWHPL*PRYRHS
Trigger: GCTGTGCCTGTACCTGGGGCAGAGAGGATGCCAGGG...CAGAAGGTTTGTGACGTAGCTGTGCCTGTACCTGGGGCAGAGAGGATGCCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp ACTGGGCCCAACAGAAGCACCCACAGCTGGGATCCTGAAAAGACCTGGACCCCCACCATGCCCAGGAGGTaGGAGCAGCAGAAGTCGACC +
Preference number: 4 (lower is better)
Translates to: TGPNRSTHSWDPEKTWTPTMPRR*EQQKST
Trigger: GGTCGACTTCTGCTGCTCCCACCTCCTGGGCATGGT...GGGGGTCCAGGTCTTTTCAGGATCCCAGCTGTGGGTGCTTCTGTTGGGCCCAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216177.8
ENST00000597664.6
CDS-3UTR CCA 90 bp GCCACTGGGCCCAACAGAAGCACCCACAGCTGGGATCCTGAAAAGACCTGGACCTTGGGGGAGGTGCTCTaGGGGCAGATGTCCACTGTC +
Preference number: 4 (lower is better)
Translates to: ATGPNRSTHSWDPEKTWTLGEVL*GQMSTV
Trigger: GACAGTGGACATCTGCCCCCAGAGCACCTCCCCCAA...GGTCCAGGTCTTTTCAGGATCCCAGCTGTGGGTGCTTCTGTTGGGCCCAGTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp ACTGGGCCCAACAGAAGCACCCACAGCTGGGATCCTGAAAAGACCTGGACCCCCTTGGGGGAGGTGCTCTaGGGGCAGATGTCCACTGTC +
Preference number: 4 (lower is better)
Translates to: TGPNRSTHSWDPEKTWTPLGEVL*GQMSTV
Trigger: GACAGTGGACATCTGCCCCCAGAGCACCTCCCCCAA...GGGGGTCCAGGTCTTTTCAGGATCCCAGCTGTGGGTGCTTCTGTTGGGCCCAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp ACAGTGACCGGGGACATGCTGACAGGCTGCGCCCCAAGGAACGGGCTCCAAGCTCAAGGAGCTGGGCCTTaGTCCTGGAGAAAACCTCGA +
Preference number: 4 (lower is better)
Translates to: TVTGDMLTGCAPRNGLQAQGAGP*SWRKPR
Trigger: TCGAGGTTTTCTCCAGGACCAAGGCCCAGCTCCTTG...AGCTTGGAGCCCGTTCCTTGGGGCGCAGCCTGTCAGCATGTCCCCGGTCACTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp GTGACCTGGGTACACAGTGACCGGGGACATGCTGACAGGCTGCGCCCCAAGGAAGGAGCTATCTGGGGTTaGAGGGGGCTTGTTTCCAGG +
Preference number: 4 (lower is better)
Translates to: VTWVHSDRGHADRLRPKEGAIWG*RGLVSR
Trigger: CCTGGAAACAAGCCCCCTCCAACCCCAGATAGCTCC...TTCCTTGGGGCGCAGCCTGTCAGCATGTCCCCGGTCACTGTGTACCCAGGTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp AGCTGCAGGGTCTCCACGGAGATTGGCAGGGCCTCTTCCCGCTGGGGCAGATGTCCCCATCATCTCAGTTaGCTCCTCTGGTCTCTGACG +
Preference number: 4 (lower is better)
Translates to: SCRVSTEIGRASSRWGRCPHHLS*LLWSLT
Trigger: CGTCAGAGACCAGAGGAGCCAACTGAGATGATGGGG...ACATCTGCCCCAGCGGGAAGAGGCCCTGCCAATCTCCGTGGAGACCCTGCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp CAGGCTGCGCCCCAAGGAACGGGCTCCAAGCTGCAGGGTCTCCACGGAGATTGGAGAAGCACCCACAGCTaGGATCCTGAAAAGACCTGG +
Preference number: 4 (lower is better)
Translates to: QAAPQGTGSKLQGLHGDWRSTHS*DPEKTW
Trigger: CCAGGTCTTTTCAGGATCCCAGCTGTGGGTGCTTCT...CCAATCTCCGTGGAGACCCTGCAGCTTGGAGCCCGTTCCTTGGGGCGCAGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR TCA 90 bp CCCACGTGTATTCCTTTGCTTCCCGTTCTCACTCACGCCTCCATCTCTCTAACCGGAAGGGTCACTCCGTaGCCCGGGATAGGGCCGGGA +
Preference number: 4 (lower is better)
Translates to: PTCIPLLPVLTHASISLTGRVTP*PGIGPG
Trigger: TCCCGGCCCTATCCCGGGTCACGGAGTGACCCTTCC...GGTTAGAGAGATGGAGGCGTGAGTGAGAACGGGAAGCAAAGGAATACACGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR TCA 90 bp GGGCCACTGGGCCCAACAGAAGCACCCACAGCTGGGATCCTGAAAAGACCTGGAAGCCTCCAGCTCTGGTaGGAGCTGCTCAAAGTTGGG +
Preference number: 4 (lower is better)
Translates to: GPLGPTEAPTAGILKRPGSLQLW*ELLKVG
Trigger: CCCAACTTTGAGCAGCTCTCACCAGAGCTGGAGGCT...TCCAGGTCTTTTCAGGATCCCAGCTGTGGGTGCTTCTGTTGGGCCCAGTGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR TCA 90 bp ACTGGGCCCAACAGAAGCACCCACAGCTGGGATCCTGAAAAGACCTGGACCCCCCCGAGCTCCTCTCTATaGGGAGCTATCTGGGGTTGG +
Preference number: 4 (lower is better)
Translates to: TGPNRSTHSWDPEKTWTPPSSSL*GAIWGW
Trigger: CCAACCCCAGATAGCTCCTCATAGAGAGGAGCTCGG...GGGGGTCCAGGTCTTTTCAGGATCCCAGCTGTGGGTGCTTCTGTTGGGCCCAGT
60% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR TCA 90 bp GCCACTGGGCCCAACAGAAGCACCCACAGCTGGGATCCTGAAAAGACCTGGACCCCTCCTGGGCTCAAATaGTCCTCCATCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: ATGPNRSTHSWDPEKTWTPPGLK*SSILSL
Trigger: GAGGCTGAGGATGGAGGATCATTTGAGCCCAGGAGG...GGTCCAGGTCTTTTCAGGATCCCAGCTGTGGGTGCTTCTGTTGGGCCCAGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216177.8
ENST00000593866.5
ENST00000597664.6
CDS-3UTR TCA 90 bp GGGCCACTGGGCCCAACAGAAGCACCCACAGCTGGGATCCTGAAAAGACCTGGACCTCCTGGGCTCAAATaGTCCTCCATCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: GPLGPTEAPTAGILKRPGPPGLK*SSILSL
Trigger: GAGGCTGAGGATGGAGGATCATTTGAGCCCAGGAGG...TCCAGGTCTTTTCAGGATCCCAGCTGTGGGTGCTTCTGTTGGGCCCAGTGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216177.8
ENST00000593866.5
ENST00000597664.6
CDS-3UTR GCA 90 bp GCCCCAAGGAACGGGCTCCAAGCTGCAGGGTCTCCACGGAGATTGGCAGGGCCTCAAAGGGCAAGTTGTTaGTCAGAGCCCCATCGATGT +
Preference number: 4 (lower is better)
Translates to: APRNGLQAAGSPRRLAGPQRASC*SEPHRC
Trigger: ACATCGATGGGGCTCTGAGCAACAACTTGCCCTTTG...AGGCCCTGCCAATCTCCGTGGAGACCCTGCAGCTTGGAGCCCGTTCCTTGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216177.8
ENST00000597664.6
CDS-3UTR GCA 90 bp GCCCCAAGGAACGGGCTCCAAGCTGCAGGGTCTCCACGGAGATTGGCAGGGCCTGGTACATCCTTGACTTaGACATGGGGCACTTTCCAG +
Preference number: 4 (lower is better)
Translates to: APRNGLQAAGSPRRLAGPGTSLT*TWGTFQ
Trigger: CTGGAAAGTGCCCCATGTGCAAGTCAAGGATGTACC...AGGCCCTGCCAATCTCCGTGGAGACCCTGCAGCTTGGAGCCCGTTCCTTGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR GCA 90 bp CAGGCTGCGCCCCAAGGAACGGGCTCCAAGCTGCAGGGTCTCCACGGAGATTGGAGCTCTGGTGAGAGCTaGTCAAAGTTGGGTACATCC +
Preference number: 4 (lower is better)
Translates to: QAAPQGTGSKLQGLHGDWSSGES*SKLGTS
Trigger: GGATGTACCCAACTTTGAGCAGCTCTCACCAGAGCT...CCAATCTCCGTGGAGACCCTGCAGCTTGGAGCCCGTTCCTTGGGGCGCAGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR GCA 90 bp GCCCCAAGGAACGGGCTCCAAGCTGCAGGGTCTCCACGGAGATTGGCAGGGCCTAGCTCTGGTGAGAGCTaGTCAAAGTTGGGTACATCC +
Preference number: 4 (lower is better)
Translates to: APRNGLQAAGSPRRLAGPSSGES*SKLGTS
Trigger: GGATGTACCCAACTTTGAGCAGCTCTCACCAGAGCT...AGGCCCTGCCAATCTCCGTGGAGACCCTGCAGCTTGGAGCCCGTTCCTTGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR GCA 90 bp GGGCCACTGGGCCCAACAGAAGCACCCACAGCTGGGATCCTGAAAAGACCTGGAACTCGAAGGGCAGTGTaGAGGGTAGCAGCAGGTACG +
Preference number: 4 (lower is better)
Translates to: GPLGPTEAPTAGILKRPGTRRAV*RVAAGT
Trigger: CGTACCTGCTGCTACCCTGCACACTGCCCTTCGAGT...TCCAGGTCTTTTCAGGATCCCAGCTGTGGGTGCTTCTGTTGGGCCCAGTGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR GCA 90 bp CGGGGGCACAGCATGGGTCCCGTGCTGCCAATGGGGAGAGCAGTGACTCGTGGACCACGTGTATTCCTTTaGTTCCCGTTCTCACTCACG +
Preference number: 4 (lower is better)
Translates to: RGHSMGPVLPMGRAVTRGPRVFL*FPFSLT
Trigger: CGTGAGTGAGAACGGGAAGCAAAGGAATACACGTGG...TCCACGAGTCACTGCTCTCCCCATTGGCAGCACGGGACCCATGCTGTGCCCCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR GCA 90 bp GCCCCAAGGAACGGGCTCCAAGCTGCAGGGTCTCCACGGAGATTGGCAGGGCCTCCACGTGTATTCCTTTaGTTCCCGTTCTCACTCACG +
Preference number: 4 (lower is better)
Translates to: APRNGLQAAGSPRRLAGPPRVFL*FPFSLT
Trigger: CGTGAGTGAGAACGGGAAGCAAAGGAATACACGTGG...AGGCCCTGCCAATCTCCGTGGAGACCCTGCAGCTTGGAGCCCGTTCCTTGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp CAAGGAACGGGCTCCAAGCTGCAGGGTCTCCACGGAGATTGGCAGGGCCTCTTCATGTCCACTGTCCCATaGAAGGGCGACACCGTGATG +
Preference number: 4 (lower is better)
Translates to: QGTGSKLQGLHGDWQGLFMSTVP*KGDTVM
Trigger: CATCACGGTGTCGCCCTTCCATGGGACAGTGGACAT...GAAGAGGCCCTGCCAATCTCCGTGGAGACCCTGCAGCTTGGAGCCCGTTCCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp GTGACCTGGGTACACAGTGACCGGGGACATGCTGACAGGCTGCGCCCCAAGGAACAAGGAGCTGGGCCTTaGTCCTGGAGAAAACCTCGA +
Preference number: 4 (lower is better)
Translates to: VTWVHSDRGHADRLRPKEQGAGP*SWRKPR
Trigger: TCGAGGTTTTCTCCAGGACCAAGGCCCAGCTCCTTG...TTCCTTGGGGCGCAGCCTGTCAGCATGTCCCCGGTCACTGTGTACCCAGGTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp CTTTCTCAATCTTCTGTGAGGTGCTCCGTGGGCAGCTCCACGGCAGAACAGGAGCTCAGGCCTGGTGGGTaGGCCCGAGCTCCTCTCTAT +
Preference number: 4 (lower is better)
Translates to: LSQSSVRCSVGSSTAEQELRPGG*ARAPLY
Trigger: ATAGAGAGGAGCTCGGGCCCACCCACCAGGCCTGAG...CTCCTGTTCTGCCGTGGAGCTGCCCACGGAGCACCTCACAGAAGATTGAGAAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp GTGACCTGGGTACACAGTGACCGGGGACATGCTGACAGGCTGCGCCCCAAGGAACCCCATCATCTCAGTTaGCTCCTCTGGTCTCTGACG +
Preference number: 4 (lower is better)
Translates to: VTWVHSDRGHADRLRPKEPHHLS*LLWSLT
Trigger: CGTCAGAGACCAGAGGAGCCAACTGAGATGATGGGG...TTCCTTGGGGCGCAGCCTGTCAGCATGTCCCCGGTCACTGTGTACCCAGGTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp CCCACGTGTATTCCTTTGCTTCCCGTTCTCACTCACGCCTCCATCTCTCTAACCGCCGGGGGCACAGCATaGGTCCCGTGCTGCCAATGG +
Preference number: 4 (lower is better)
Translates to: PTCIPLLPVLTHASISLTAGGTA*VPCCQW
Trigger: CCATTGGCAGCACGGGACCCATGCTGTGCCCCCGGC...GGTTAGAGAGATGGAGGCGTGAGTGAGAACGGGAAGCAAAGGAATACACGTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR TCA 90 bp ACAGTGACCGGGGACATGCTGACAGGCTGCGCCCCAAGGAACGGGCTCCAAGCTAGTTGGGTACATCCTTaGCTTGCACATGGGGCACTT +
Preference number: 4 (lower is better)
Translates to: TVTGDMLTGCAPRNGLQASWVHP*LAHGAL
Trigger: AAGTGCCCCATGTGCAAGTCAAGGATGTACCCAACT...AGCTTGGAGCCCGTTCCTTGGGGCGCAGCCTGTCAGCATGTCCCCGGTCACTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR TCA 90 bp AGCTGCAGGGTCTCCACGGAGATTGGCAGGGCCTCTTCCCGCTGGGGCAGATGTAGTTGGGTACATCCTTaGCTTGCACATGGGGCACTT +
Preference number: 4 (lower is better)
Translates to: SCRVSTEIGRASSRWGRCSWVHP*LAHGAL
Trigger: AAGTGCCCCATGTGCAAGTCAAGGATGTACCCAACT...ACATCTGCCCCAGCGGGAAGAGGCCCTGCCAATCTCCGTGGAGACCCTGCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR GCA 90 bp ACCTTCTGCAGGAATGAGGCTGTGGGGATAGCAGGGGCCACTGGGCCCAACAGAGGTGGAGGGGCAGTCTaGAAAGGGCAAGTTGTTGCT +
Preference number: 4 (lower is better)
Translates to: TFCRNEAVGIAGATGPNRGGGAV*KGQVVA
Trigger: AGCAACAACTTGCCCTTTGCAGACTGCCCCTCCACC...TCTGTTGGGCCCAGTGGCCCCTGCTATCCCCACAGCCTCATTCCTGCAGAAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216177.8
ENST00000597664.6
CDS-3UTR GCA 90 bp CAAGGAACGGGCTCCAAGCTGCAGGGTCTCCACGGAGATTGGCAGGGCCTCTTCGGGATCCCTCGTACATaGTTTCTTCAGTGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: QGTGSKLQGLHGDWQGLFGIPRT*FLQCSL
Trigger: GAGGCTGCACTGAAGAAAGCATGTACGAGGGATCCC...GAAGAGGCCCTGCCAATCTCCGTGGAGACCCTGCAGCTTGGAGCCCGTTCCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR GCA 90 bp CCCTGGCATCCTCTCTGCCCCAGGTACAGGCACAGCTACGTCACAAACCTTCTGACTCGAAGGGCAGTGTaGAGGGTAGCAGCAGGTACG +
Preference number: 4 (lower is better)
Translates to: PWHPLCPRYRHSYVTNLLTRRAV*RVAAGT
Trigger: CGTACCTGCTGCTACCCTGCACACTGCCCTTCGAGT...CAGAAGGTTTGTGACGTAGCTGTGCCTGTACCTGGGGCAGAGAGGATGCCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR GCA 90 bp AGCTGCAGGGTCTCCACGGAGATTGGCAGGGCCTCTTCCCGCTGGGGCAGATGTCCACCAACCTTCTGCTaGGGAAGTAGATGTACTCGA +
Preference number: 4 (lower is better)
Translates to: SCRVSTEIGRASSRWGRCPPTFC*GSRCTR
Trigger: TCGAGTACATCTACTTCCGCAGCAGAAGGTTGGTGG...ACATCTGCCCCAGCGGGAAGAGGCCCTGCCAATCTCCGTGGAGACCCTGCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR GCA 90 bp GGGTCTCCACGGAGATTGGCAGGGCCTCTTCCCGCTGGGGCAGATGTGGGCACAACACCACCAACCTTCTaGTGCGGAAGTAGATGTACT +
Preference number: 4 (lower is better)
Translates to: GSPRRLAGPLPAGADVGTTPPTF*CGSRCT
Trigger: AGTACATCTACTTCCGCAGCAGAAGGTTGGTGGTGT...TGTGCCCACATCTGCCCCAGCGGGAAGAGGCCCTGCCAATCTCCGTGGAGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR GCA 90 bp GCCCCAAGGAACGGGCTCCAAGCTGCAGGGTCTCCACGGAGATTGGCAGGGCCTACACCACCAACCTTCTaGTGCGGAAGTAGATGTACT +
Preference number: 4 (lower is better)
Translates to: APRNGLQAAGSPRRLAGPTPPTF*CGSRCT
Trigger: AGTACATCTACTTCCGCAGCAGAAGGTTGGTGGTGT...AGGCCCTGCCAATCTCCGTGGAGACCCTGCAGCTTGGAGCCCGTTCCTTGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR GCA 90 bp CTTTCTCAATCTTCTGTGAGGTGCTCCGTGGGCAGCTCCACGGCAGAACAGGAGTTCCTCAGCAGGCCCTaGATCCACCACAAGTCCGCC +
Preference number: 4 (lower is better)
Translates to: LSQSSVRCSVGSSTAEQEFLSRP*IHHKSA
Trigger: GGCGGACTTGTGGTGGATGCAGGGCCTGCTGAGGAA...CTCCTGTTCTGCCGTGGAGCTGCCCACGGAGCACCTCACAGAAGATTGAGAAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR GCA 90 bp TTAGTTCCCACGTGTATTCCTTTGCTTCCCGTTCTCACTCACGCCTCCATCTCTTCACTGGGCTGGCCCTaGTCGGCCCCCTCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: LVPTCIPLLPVLTHASISSLGWP*SAPSGL
Trigger: CAGGCCTGAGGGGGCCGAGCAGGGCCAGCCCAGTGA...AGAGATGGAGGCGTGAGTGAGAACGGGAAGCAAAGGAATACACGTGGGAACTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR GCA 90 bp ACAGTGACCGGGGACATGCTGACAGGCTGCGCCCCAAGGAACGGGCTCCAAGCTCCACGTGTATTCCTTTaGTTCCCGTTCTCACTCACG +
Preference number: 4 (lower is better)
Translates to: TVTGDMLTGCAPRNGLQAPRVFL*FPFSLT
Trigger: CGTGAGTGAGAACGGGAAGCAAAGGAATACACGTGG...AGCTTGGAGCCCGTTCCTTGGGGCGCAGCCTGTCAGCATGTCCCCGGTCACTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp GGGCCACTGGGCCCAACAGAAGCACCCACAGCTGGGATCCTGAAAAGACCTGGAATGTCCACTGTCCCATaGAAGGGCGACACCGTGATG +
Preference number: 4 (lower is better)
Translates to: GPLGPTEAPTAGILKRPGMSTVP*KGDTVM
Trigger: CATCACGGTGTCGCCCTTCCATGGGACAGTGGACAT...TCCAGGTCTTTTCAGGATCCCAGCTGTGGGTGCTTCTGTTGGGCCCAGTGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp GCCCCAAGGAACGGGCTCCAAGCTGCAGGGTCTCCACGGAGATTGGCAGGGCCTTCCTTGACTTGCACATaGGGCACTTTCCAGTTGAGA +
Preference number: 4 (lower is better)
Translates to: APRNGLQAAGSPRRLAGPSLTCT*GTFQLR
Trigger: TCTCAACTGGAAAGTGCCCCATGTGCAAGTCAAGGA...AGGCCCTGCCAATCTCCGTGGAGACCCTGCAGCTTGGAGCCCGTTCCTTGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp ACCTTCTGCAGGAATGAGGCTGTGGGGATAGCAGGGGCCACTGGGCCCAACAGACAAGGAGCTGGGCCTTaGTCCTGGAGAAAACCTCGA +
Preference number: 4 (lower is better)
Translates to: TFCRNEAVGIAGATGPNRQGAGP*SWRKPR
Trigger: TCGAGGTTTTCTCCAGGACCAAGGCCCAGCTCCTTG...TCTGTTGGGCCCAGTGGCCCCTGCTATCCCCACAGCCTCATTCCTGCAGAAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp TTAGTTCCCACGTGTATTCCTTTGCTTCCCGTTCTCACTCACGCCTCCATCTCTCCCCCTCAGGCCTGGTaGGTGGGCCCGAGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: LVPTCIPLLPVLTHASISPPQAW*VGPSSS
Trigger: AGAGGAGCTCGGGCCCACCCACCAGGCCTGAGGGGG...AGAGATGGAGGCGTGAGTGAGAACGGGAAGCAAAGGAATACACGTGGGAACTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp GGGCCACTGGGCCCAACAGAAGCACCCACAGCTGGGATCCTGAAAAGACCTGGACCCCATCATCTCAGTTaGCTCCTCTGGTCTCTGACG +
Preference number: 4 (lower is better)
Translates to: GPLGPTEAPTAGILKRPGPHHLS*LLWSLT
Trigger: CGTCAGAGACCAGAGGAGCCAACTGAGATGATGGGG...TCCAGGTCTTTTCAGGATCCCAGCTGTGGGTGCTTCTGTTGGGCCCAGTGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR TCA 90 bp CTTTCTCAATCTTCTGTGAGGTGCTCCGTGGGCAGCTCCACGGCAGAACAGGAGGCACTGGTTCCTTGGTaGGTCCACGTCTCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: LSQSSVRCSVGSSTAEQEALVPW*VHVSPG
Trigger: TCCTGGAGAGACGTGGACTCACCAAGGAACCAGTGC...CTCCTGTTCTGCCGTGGAGCTGCCCACGGAGCACCTCACAGAAGATTGAGAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR GCA 90 bp GGGCCACTGGGCCCAACAGAAGCACCCACAGCTGGGATCCTGAAAAGACCTGGAAGGACAGGTTCCATCTaGCCTCCTCCTCTAAGAAGC +
Preference number: 4 (lower is better)
Translates to: GPLGPTEAPTAGILKRPGRTGSI*PPPLRS
Trigger: GCTTCTTAGAGGAGGAGGGCAGATGGAACCTGTCCT...TCCAGGTCTTTTCAGGATCCCAGCTGTGGGTGCTTCTGTTGGGCCCAGTGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR GCA 90 bp CCCTGGCATCCTCTCTGCCCCAGGTACAGGCACAGCTACGTCACAAACCTTCTGCCAGGTAGCCTTGTCTaGAGTTGTCGGCCACTACCT +
Preference number: 4 (lower is better)
Translates to: PWHPLCPRYRHSYVTNLLPGSLV*SCRPLP
Trigger: AGGTAGTGGCCGACAACTGCAGACAAGGCTACCTGG...CAGAAGGTTTGTGACGTAGCTGTGCCTGTACCTGGGGCAGAGAGGATGCCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR GCA 90 bp CAAGGAACGGGCTCCAAGCTGCAGGGTCTCCACGGAGATTGGCAGGGCCTCTTCAGCTCTGGTGAGAGCTaGTCAAAGTTGGGTACATCC +
Preference number: 4 (lower is better)
Translates to: QGTGSKLQGLHGDWQGLFSSGES*SKLGTS
Trigger: GGATGTACCCAACTTTGAGCAGCTCTCACCAGAGCT...GAAGAGGCCCTGCCAATCTCCGTGGAGACCCTGCAGCTTGGAGCCCGTTCCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR GCA 90 bp GGGCCACTGGGCCCAACAGAAGCACCCACAGCTGGGATCCTGAAAAGACCTGGAGGGATCCCTCGTACATaGTTTCTTCAGTGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: GPLGPTEAPTAGILKRPGGIPRT*FLQCSL
Trigger: GAGGCTGCACTGAAGAAAGCATGTACGAGGGATCCC...TCCAGGTCTTTTCAGGATCCCAGCTGTGGGTGCTTCTGTTGGGCCCAGTGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR GCA 90 bp CAAGGAACGGGCTCCAAGCTGCAGGGTCTCCACGGAGATTGGCAGGGCCTCTTCCCACCAACCTTCTGCTaGGGAAGTAGATGTACTCGA +
Preference number: 4 (lower is better)
Translates to: QGTGSKLQGLHGDWQGLFPPTFC*GSRCTR
Trigger: TCGAGTACATCTACTTCCGCAGCAGAAGGTTGGTGG...GAAGAGGCCCTGCCAATCTCCGTGGAGACCCTGCAGCTTGGAGCCCGTTCCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR GCA 90 bp GTGACCTGGGTACACAGTGACCGGGGACATGCTGACAGGCTGCGCCCCAAGGAACCACCAACCTTCTGCTaGGGAAGTAGATGTACTCGA +
Preference number: 4 (lower is better)
Translates to: VTWVHSDRGHADRLRPKEPPTFC*GSRCTR
Trigger: TCGAGTACATCTACTTCCGCAGCAGAAGGTTGGTGG...TTCCTTGGGGCGCAGCCTGTCAGCATGTCCCCGGTCACTGTGTACCCAGGTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR GCA 90 bp GGGCCACTGGGCCCAACAGAAGCACCCACAGCTGGGATCCTGAAAAGACCTGGAACGTCACAAACCTTCTaGAGGAATGAGGCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: GPLGPTEAPTAGILKRPGTSQTF*RNEAVG
Trigger: CCCCACAGCCTCATTCCTGCAGAAGGTTTGTGACGT...TCCAGGTCTTTTCAGGATCCCAGCTGTGGGTGCTTCTGTTGGGCCCAGTGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp TTAGTTCCCACGTGTATTCCTTTGCTTCCCGTTCTCACTCACGCCTCCATCTCTCCCAAATGTGGGCTCTaGAGGGAGCCGGGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: LVPTCIPLLPVLTHASISPKCGL*REPGWG
Trigger: GCCCCAGCCCGGCTCCCTCCAGAGCCCACATTTGGG...AGAGATGGAGGCGTGAGTGAGAACGGGAAGCAAAGGAATACACGTGGGAACTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp CGGGCTCCAAGCTGCAGGGTCTCCACGGAGATTGGCAGGGCCTCTTCCCGCTGGTTCTCAGTGGAGATTTaGAAGCTGAAGTTGAAGACG +
Preference number: 4 (lower is better)
Translates to: RAPSCRVSTEIGRASSRWFSVEI*KLKLKT
Trigger: CGTCTTCAACTTCAGCTTCCAAATCTCCACTGAGAA...CCAGCGGGAAGAGGCCCTGCCAATCTCCGTGGAGACCCTGCAGCTTGGAGCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp CCCTGGCATCCTCTCTGCCCCAGGTACAGGCACAGCTACGTCACAAACCTTCTGCAAGGAGCTGGGCCTTaGTCCTGGAGAAAACCTCGA +
Preference number: 4 (lower is better)
Translates to: PWHPLCPRYRHSYVTNLLQGAGP*SWRKPR
Trigger: TCGAGGTTTTCTCCAGGACCAAGGCCCAGCTCCTTG...CAGAAGGTTTGTGACGTAGCTGTGCCTGTACCTGGGGCAGAGAGGATGCCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp CCCACGTGTATTCCTTTGCTTCCCGTTCTCACTCACGCCTCCATCTCTCTAACCGGAGGGCAGGTGACCTaGGTACACAGTGACCGGGGA +
Preference number: 4 (lower is better)
Translates to: PTCIPLLPVLTHASISLTGGQVT*VHSDRG
Trigger: TCCCCGGTCACTGTGTACCCAGGTCACCTGCCCTCC...GGTTAGAGAGATGGAGGCGTGAGTGAGAACGGGAAGCAAAGGAATACACGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp ACTGGGCCCAACAGAAGCACCCACAGCTGGGATCCTGAAAAGACCTGGACCCCCAGAAGCACCCACAGCTaGGATCCTGAAAAGACCTGG +
Preference number: 4 (lower is better)
Translates to: TGPNRSTHSWDPEKTWTPRSTHS*DPEKTW
Trigger: CCAGGTCTTTTCAGGATCCCAGCTGTGGGTGCTTCT...GGGGGTCCAGGTCTTTTCAGGATCCCAGCTGTGGGTGCTTCTGTTGGGCCCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp GGCCAGAGCAGGAATCAAGGGACACCAGTCACTGGGCTGGCCCTGCTCGGCCCCCTATGCTGCCCAGGCTaGTCATTTTTCTCTTTAGTT +
Preference number: 4 (lower is better)
Translates to: GQSRNQGTPVTGLALLGPLCCPG*SFFSLV
Trigger: AACTAAAGAGAAAAATGACCAGCCTGGGCAGCATAG...GGGGCCGAGCAGGGCCAGCCCAGTGACTGGTGTCCCTTGATTCCTGCTCTGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR TCA 90 bp CCCACGTGTATTCCTTTGCTTCCCGTTCTCACTCACGCCTCCATCTCTCTAACCAAGAGGGAGGGCAGGTaGCCTGGGTACACAGTGACC +
Preference number: 4 (lower is better)
Translates to: PTCIPLLPVLTHASISLTKREGR*PGYTVT
Trigger: GGTCACTGTGTACCCAGGTCACCTGCCCTCCCTCTT...GGTTAGAGAGATGGAGGCGTGAGTGAGAACGGGAAGCAAAGGAATACACGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR TCA 90 bp CCCACGTGTATTCCTTTGCTTCCCGTTCTCACTCACGCCTCCATCTCTCTAACCCAATGGGGAGAGCAGTaGCTCGTGGAGAGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: PTCIPLLPVLTHASISLTQWGEQ*LVERPE
Trigger: CTCTGGCCTCTCCACGAGTCACTGCTCTCCCCATTG...GGTTAGAGAGATGGAGGCGTGAGTGAGAACGGGAAGCAAAGGAATACACGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR GCA 90 bp TTAGTTCCCACGTGTATTCCTTTGCTTCCCGTTCTCACTCACGCCTCCATCTCTACGAGGAACCGTAGATaGGGCGGGCGCCCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: LVPTCIPLLPVLTHASISTRNRR*GGRPGG
Trigger: TCCTCCAGGGCGCCCGCCGCATCTACGGTTCCTCGT...AGAGATGGAGGCGTGAGTGAGAACGGGAAGCAAAGGAATACACGTGGGAACTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR GCA 90 bp CAAGGAACGGGCTCCAAGCTGCAGGGTCTCCACGGAGATTGGCAGGGCCTCTTCACACCACCAACCTTCTaGTGCGGAAGTAGATGTACT +
Preference number: 4 (lower is better)
Translates to: QGTGSKLQGLHGDWQGLFTPPTF*CGSRCT
Trigger: AGTACATCTACTTCCGCAGCAGAAGGTTGGTGGTGT...GAAGAGGCCCTGCCAATCTCCGTGGAGACCCTGCAGCTTGGAGCCCGTTCCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp ATTTTTCTCTTTAGTTCCCACGTGTATTCCTTTGCTTCCCGTTCTCACTCACGCGGCGCAGGCATTCGGTaGCGCCCACGTGGTGGGCGC +
Preference number: 4 (lower is better)
Translates to: IFLFSSHVYSFASRSHSRGAGIR*RPRGGR
Trigger: GCGCCCACCACGTGGGCGCCACCGAATGCCTGCGCC...GCGTGAGTGAGAACGGGAAGCAAAGGAATACACGTGGGAACTAAAGAGAAAAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp CCCACGTGTATTCCTTTGCTTCCCGTTCTCACTCACGCCTCCATCTCTCTAACCACCATGCCCAGGAGGTaGGAGCAGCAGAAGTCGACC +
Preference number: 4 (lower is better)
Translates to: PTCIPLLPVLTHASISLTTMPRR*EQQKST
Trigger: GGTCGACTTCTGCTGCTCCCACCTCCTGGGCATGGT...GGTTAGAGAGATGGAGGCGTGAGTGAGAACGGGAAGCAAAGGAATACACGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216177.8
ENST00000597664.6
CDS-3UTR CCA 90 bp CTTTCTCAATCTTCTGTGAGGTGCTCCGTGGGCAGCTCCACGGCAGAACAGGAGATGTCCACTGTCCCATaGAAGGGCGACACCGTGATG +
Preference number: 4 (lower is better)
Translates to: LSQSSVRCSVGSSTAEQEMSTVP*KGDTVM
Trigger: CATCACGGTGTCGCCCTTCCATGGGACAGTGGACAT...CTCCTGTTCTGCCGTGGAGCTGCCCACGGAGCACCTCACAGAAGATTGAGAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp CCTGGGTACACAGTGACCGGGGACATGCTGACAGGCTGCGCCCCAAGGAACGGGTTCTCAGTGGAGATTTaGAAGCTGAAGTTGAAGACG +
Preference number: 4 (lower is better)
Translates to: PGYTVTGDMLTGCAPRNGFSVEI*KLKLKT
Trigger: CGTCTTCAACTTCAGCTTCCAAATCTCCACTGAGAA...CCCGTTCCTTGGGGCGCAGCCTGTCAGCATGTCCCCGGTCACTGTGTACCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp GGGTCTCCACGGAGATTGGCAGGGCCTCTTCCCGCTGGGGCAGATGTGGGCACATTCTCAGTGGAGATTTaGAAGCTGAAGTTGAAGACG +
Preference number: 4 (lower is better)
Translates to: GSPRRLAGPLPAGADVGTFSVEI*KLKLKT
Trigger: CGTCTTCAACTTCAGCTTCCAAATCTCCACTGAGAA...TGTGCCCACATCTGCCCCAGCGGGAAGAGGCCCTGCCAATCTCCGTGGAGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp GTTCCCACGTGTATTCCTTTGCTTCCCGTTCTCACTCACGCCTCCATCTCTCTATCCGTCAGCCGGGGCTaGGGGTTCCTTAGACACCAG +
Preference number: 4 (lower is better)
Translates to: VPTCIPLLPVLTHASISLSVSRG*GFLRHQ
Trigger: CTGGTGTCTAAGGAACCCCCAGCCCCGGCTGACGGA...TAGAGAGATGGAGGCGTGAGTGAGAACGGGAAGCAAAGGAATACACGTGGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp GTGACCTGGGTACACAGTGACCGGGGACATGCTGACAGGCTGCGCCCCAAGGAATCCTTGACTTGCACATaGGGCACTTTCCAGTTGAGA +
Preference number: 4 (lower is better)
Translates to: VTWVHSDRGHADRLRPKESLTCT*GTFQLR
Trigger: TCTCAACTGGAAAGTGCCCCATGTGCAAGTCAAGGA...TTCCTTGGGGCGCAGCCTGTCAGCATGTCCCCGGTCACTGTGTACCCAGGTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp GTTCCCACGTGTATTCCTTTGCTTCCCGTTCTCACTCACGCCTCCATCTCTCTACCGCTGGGGCAGATGTaGGCACACAGGACAAAGGCC +
Preference number: 4 (lower is better)
Translates to: VPTCIPLLPVLTHASISLPLGQM*AHRTKA
Trigger: GGCCTTTGTCCTGTGTGCCCACATCTGCCCCAGCGG...TAGAGAGATGGAGGCGTGAGTGAGAACGGGAAGCAAAGGAATACACGTGGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp GTTCCCACGTGTATTCCTTTGCTTCCCGTTCTCACTCACGCCTCCATCTCTCTAAGGGCCTCTTCCCGCTaGGGCAGATGTGGGCACACA +
Preference number: 4 (lower is better)
Translates to: VPTCIPLLPVLTHASISLRASSR*GRCGHT
Trigger: TGTGTGCCCACATCTGCCCCAGCGGGAAGAGGCCCT...TAGAGAGATGGAGGCGTGAGTGAGAACGGGAAGCAAAGGAATACACGTGGGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR TCA 90 bp CCCACGTGTATTCCTTTGCTTCCCGTTCTCACTCACGCCTCCATCTCTCTAACCAGCCTCCAGCTCTGGTaGGAGCTGCTCAAAGTTGGG +
Preference number: 4 (lower is better)
Translates to: PTCIPLLPVLTHASISLTSLQLW*ELLKVG
Trigger: CCCAACTTTGAGCAGCTCTCACCAGAGCTGGAGGCT...GGTTAGAGAGATGGAGGCGTGAGTGAGAACGGGAAGCAAAGGAATACACGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR TCA 90 bp CCCACGTGTATTCCTTTGCTTCCCGTTCTCACTCACGCCTCCATCTCTCTAACCCCTCCTGGGCTCAAATaGTCCTCCATCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: PTCIPLLPVLTHASISLTPPGLK*SSILSL
Trigger: GAGGCTGAGGATGGAGGATCATTTGAGCCCAGGAGG...GGTTAGAGAGATGGAGGCGTGAGTGAGAACGGGAAGCAAAGGAATACACGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216177.8
ENST00000593866.5
ENST00000597664.6
CDS-3UTR GCA 90 bp CCCTGGCATCCTCTCTGCCCCAGGTACAGGCACAGCTACGTCACAAACCTTCTGGGTACATCCTTGACTTaGACATGGGGCACTTTCCAG +
Preference number: 4 (lower is better)
Translates to: PWHPLCPRYRHSYVTNLLGTSLT*TWGTFQ
Trigger: CTGGAAAGTGCCCCATGTGCAAGTCAAGGATGTACC...CAGAAGGTTTGTGACGTAGCTGTGCCTGTACCTGGGGCAGAGAGGATGCCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR GCA 90 bp CCCACGTGTATTCCTTTGCTTCCCGTTCTCACTCACGCCTCCATCTCTCTAACCACTCGAAGGGCAGTGTaGAGGGTAGCAGCAGGTACG +
Preference number: 4 (lower is better)
Translates to: PTCIPLLPVLTHASISLTTRRAV*RVAAGT
Trigger: CGTACCTGCTGCTACCCTGCACACTGCCCTTCGAGT...GGTTAGAGAGATGGAGGCGTGAGTGAGAACGGGAAGCAAAGGAATACACGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR GCA 90 bp GTTCCCACGTGTATTCCTTTGCTTCCCGTTCTCACTCACGCCTCCATCTCTCTATTCCTCAGCAGGCCCTaGATCCACCACAAGTCCGCC +
Preference number: 4 (lower is better)
Translates to: VPTCIPLLPVLTHASISLFLSRP*IHHKSA
Trigger: GGCGGACTTGTGGTGGATGCAGGGCCTGCTGAGGAA...TAGAGAGATGGAGGCGTGAGTGAGAACGGGAAGCAAAGGAATACACGTGGGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR GCA 90 bp CCCACGTGTATTCCTTTGCTTCCCGTTCTCACTCACGCCTCCATCTCTCTAACCGAACGGGCTCCAAGCTaGAGGGTCTCCACGGAGATT +
Preference number: 4 (lower is better)
Translates to: PTCIPLLPVLTHASISLTERAPS*RVSTEI
Trigger: AATCTCCGTGGAGACCCTGCAGCTTGGAGCCCGTTC...GGTTAGAGAGATGGAGGCGTGAGTGAGAACGGGAAGCAAAGGAATACACGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR GCA 90 bp TTAGTTCCCACGTGTATTCCTTTGCTTCCCGTTCTCACTCACGCCTCCATCTCTCCCTGGCATCCTCTCTaGCCCAGGTACAGGCACAGC +
Preference number: 4 (lower is better)
Translates to: LVPTCIPLLPVLTHASISPWHPL*PRYRHS
Trigger: GCTGTGCCTGTACCTGGGGCAGAGAGGATGCCAGGG...AGAGATGGAGGCGTGAGTGAGAACGGGAAGCAAAGGAATACACGTGGGAACTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp TTAGTTCCCACGTGTATTCCTTTGCTTCCCGTTCTCACTCACGCCTCCATCTCTAGCGGGCCCACCGGCTaGGATCCCTCGTACATGCTT +
Preference number: 4 (lower is better)
Translates to: LVPTCIPLLPVLTHASISSGPTG*DPSYML
Trigger: AAGCATGTACGAGGGATCCCAGCCGGTGGGCCCGCT...AGAGATGGAGGCGTGAGTGAGAACGGGAAGCAAAGGAATACACGTGGGAACTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp ATTTTTCTCTTTAGTTCCCACGTGTATTCCTTTGCTTCCCGTTCTCACTCACGCCCCCCTCAGGCCTGGTaGGTGGGCCCGAGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: IFLFSSHVYSFASRSHSRPPQAW*VGPSSS
Trigger: AGAGGAGCTCGGGCCCACCCACCAGGCCTGAGGGGG...GCGTGAGTGAGAACGGGAAGCAAAGGAATACACGTGGGAACTAAAGAGAAAAAT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp TTAGTTCCCACGTGTATTCCTTTGCTTCCCGTTCTCACTCACGCCTCCATCTCTAGGACTGAGAAAGTCTaGGGGGAGCACCCCCACCCC +
Preference number: 4 (lower is better)
Translates to: LVPTCIPLLPVLTHASISRTEKV*GEHPHP
Trigger: GGGGTGGGGGTGCTCCCCCCAGACTTTCTCAGTCCT...AGAGATGGAGGCGTGAGTGAGAACGGGAAGCAAAGGAATACACGTGGGAACTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp GTTCCCACGTGTATTCCTTTGCTTCCCGTTCTCACTCACGCCTCCATCTCTCTAGATAGCAGGGGCCACTaGGCCCAACAGAAGCACCCA +
Preference number: 4 (lower is better)
Translates to: VPTCIPLLPVLTHASISLDSRGH*AQQKHP
Trigger: TGGGTGCTTCTGTTGGGCCCAGTGGCCCCTGCTATC...TAGAGAGATGGAGGCGTGAGTGAGAACGGGAAGCAAAGGAATACACGTGGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR TCA 90 bp GTTCCCACGTGTATTCCTTTGCTTCCCGTTCTCACTCACGCCTCCATCTCTCTAGCACTGGTTCCTTGGTaGGTCCACGTCTCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: VPTCIPLLPVLTHASISLALVPW*VHVSPG
Trigger: TCCTGGAGAGACGTGGACTCACCAAGGAACCAGTGC...TAGAGAGATGGAGGCGTGAGTGAGAACGGGAAGCAAAGGAATACACGTGGGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR TCA 90 bp CTTTCTCAATCTTCTGTGAGGTGCTCCGTGGGCAGCTCCACGGCAGAACAGGAGAGTTGGGTACATCCTTaGCTTGCACATGGGGCACTT +
Preference number: 4 (lower is better)
Translates to: LSQSSVRCSVGSSTAEQESWVHP*LAHGAL
Trigger: AAGTGCCCCATGTGCAAGTCAAGGATGTACCCAACT...CTCCTGTTCTGCCGTGGAGCTGCCCACGGAGCACCTCACAGAAGATTGAGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR GCA 90 bp AGGCTGGTCATTTTTCTCTTTAGTTCCCACGTGTATTCCTTTGCTTCCCGTTCTGGGATAGGGCCGGGATaGAGCCTTGGACGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: RLVIFLFSSHVYSFASRSGIGPG*SLGRGW
Trigger: CCAGCCCCGTCCAAGGCTGCATCCCGGCCCTATCCC...AGAACGGGAAGCAAAGGAATACACGTGGGAACTAAAGAGAAAAATGACCAGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR GCA 90 bp CCCACGTGTATTCCTTTGCTTCCCGTTCTCACTCACGCCTCCATCTCTCTAACCAGAGCATCCTGCAGCTaGTGCTTGACGTGCTCGATG +
Preference number: 4 (lower is better)
Translates to: PTCIPLLPVLTHASISLTRASCS*CLTCSM
Trigger: CATCGAGCACGTCAAGCAGCAGCTGCAGGATGCTCT...GGTTAGAGAGATGGAGGCGTGAGTGAGAACGGGAAGCAAAGGAATACACGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216177.8
ENST00000597664.6
CDS-3UTR GCA 90 bp CCCACGTGTATTCCTTTGCTTCCCGTTCTCACTCACGCCTCCATCTCTCTAACCAAGACGTTCAGCTCATaGAGGTTGGGGGAGGTGCTC +
Preference number: 4 (lower is better)
Translates to: PTCIPLLPVLTHASISLTKTFSS*RLGEVL
Trigger: GAGCACCTCCCCCAACCTGCATGAGCTGAACGTCTT...GGTTAGAGAGATGGAGGCGTGAGTGAGAACGGGAAGCAAAGGAATACACGTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR GCA 90 bp CCCACGTGTATTCCTTTGCTTCCCGTTCTCACTCACGCCTCCATCTCTCTAACCCCAGGTAGCCTTGTCTaGAGTTGTCGGCCACTACCT +
Preference number: 4 (lower is better)
Translates to: PTCIPLLPVLTHASISLTPGSLV*SCRPLP
Trigger: AGGTAGTGGCCGACAACTGCAGACAAGGCTACCTGG...GGTTAGAGAGATGGAGGCGTGAGTGAGAACGGGAAGCAAAGGAATACACGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR GCA 90 bp CTTTCTCAATCTTCTGTGAGGTGCTCCGTGGGCAGCTCCACGGCAGAACAGGAGGGTACATCCTTGACTTaGACATGGGGCACTTTCCAG +
Preference number: 4 (lower is better)
Translates to: LSQSSVRCSVGSSTAEQEGTSLT*TWGTFQ
Trigger: CTGGAAAGTGCCCCATGTGCAAGTCAAGGATGTACC...CTCCTGTTCTGCCGTGGAGCTGCCCACGGAGCACCTCACAGAAGATTGAGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR GCA 90 bp CTTTCTCAATCTTCTGTGAGGTGCTCCGTGGGCAGCTCCACGGCAGAACAGGAGAGCTCTGGTGAGAGCTaGTCAAAGTTGGGTACATCC +
Preference number: 4 (lower is better)
Translates to: LSQSSVRCSVGSSTAEQESSGES*SKLGTS
Trigger: GGATGTACCCAACTTTGAGCAGCTCTCACCAGAGCT...CTCCTGTTCTGCCGTGGAGCTGCCCACGGAGCACCTCACAGAAGATTGAGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR GCA 90 bp CCCTGGCATCCTCTCTGCCCCAGGTACAGGCACAGCTACGTCACAAACCTTCTGACACCACCAACCTTCTaGTGCGGAAGTAGATGTACT +
Preference number: 4 (lower is better)
Translates to: PWHPLCPRYRHSYVTNLLTPPTF*CGSRCT
Trigger: AGTACATCTACTTCCGCAGCAGAAGGTTGGTGGTGT...CAGAAGGTTTGTGACGTAGCTGTGCCTGTACCTGGGGCAGAGAGGATGCCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp AGGCTGGTCATTTTTCTCTTTAGTTCCCACGTGTATTCCTTTGCTTCCCGTTCTCCTCTAAGAAGCCCATaGCGGGTGGACCGGGCGGGG +
Preference number: 4 (lower is better)
Translates to: RLVIFLFSSHVYSFASRSPLRSP*RVDRAG
Trigger: CCCCGCCCGGTCCACCCGCCATGGGCTTCTTAGAGG...AGAACGGGAAGCAAAGGAATACACGTGGGAACTAAAGAGAAAAATGACCAGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp TTAGTTCCCACGTGTATTCCTTTGCTTCCCGTTCTCACTCACGCCTCCATCTCTGCTGGGCCTTGGTCCTaGAGAAAACCTCGAGGGCCA +
Preference number: 4 (lower is better)
Translates to: LVPTCIPLLPVLTHASISAGPWS*RKPRGP
Trigger: TGGCCCTCGAGGTTTTCTCCAGGACCAAGGCCCAGC...AGAGATGGAGGCGTGAGTGAGAACGGGAAGCAAAGGAATACACGTGGGAACTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR GCA 90 bp TTAGTTCCCACGTGTATTCCTTTGCTTCCCGTTCTCACTCACGCCTCCATCTCTGAACGGGCTCCAAGCTaGAGGGTCTCCACGGAGATT +
Preference number: 4 (lower is better)
Translates to: LVPTCIPLLPVLTHASISERAPS*RVSTEI
Trigger: AATCTCCGTGGAGACCCTGCAGCTTGGAGCCCGTTC...AGAGATGGAGGCGTGAGTGAGAACGGGAAGCAAAGGAATACACGTGGGAACTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp GGGCCACTGGGCCCAACAGAAGCACCCACAGCTGGGATCCTGAAAAGACCTGGACTATGCTGCCCAGGCTaGTCATTTTTCTCTTTAGTT +
Preference number: 4 (lower is better)
Translates to: GPLGPTEAPTAGILKRPGLCCPG*SFFSLV
Trigger: AACTAAAGAGAAAAATGACCAGCCTGGGCAGCATAG...TCCAGGTCTTTTCAGGATCCCAGCTGTGGGTGCTTCTGTTGGGCCCAGTGGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR TCA 90 bp TTAGTTCCCACGTGTATTCCTTTGCTTCCCGTTCTCACTCACGCCTCCATCTCTAACCTTCTGCAGGAATaGGGCTGTGGGGATAGCAGG +
Preference number: 4 (lower is better)
Translates to: LVPTCIPLLPVLTHASISNLLQE*GCGDSR
Trigger: CCTGCTATCCCCACAGCCTCATTCCTGCAGAAGGTT...AGAGATGGAGGCGTGAGTGAGAACGGGAAGCAAAGGAATACACGTGGGAACTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR TCA 90 bp AGGCTGGTCATTTTTCTCTTTAGTTCCCACGTGTATTCCTTTGCTTCCCGTTCTTGGGGTGCAGTGGCGTaGTCACGGTTCACTGCAGCC +
Preference number: 4 (lower is better)
Translates to: RLVIFLFSSHVYSFASRSWGAVA*SRFTAA
Trigger: GGCTGCAGTGAACCGTGATCACGCCACTGCACCCCA...AGAACGGGAAGCAAAGGAATACACGTGGGAACTAAAGAGAAAAATGACCAGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000216177.8
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp ATTTTTCTCTTTAGTTCCCACGTGTATTCCTTTGCTTCCCGTTCTCACTCACGCCTCAGGCCTGGTGGGTaGGCCCGAGCTCCTCTCTAT +
Preference number: 4 (lower is better)
Translates to: IFLFSSHVYSFASRSHSRLRPGG*ARAPLY
Trigger: ATAGAGAGGAGCTCGGGCCCACCCACCAGGCCTGAG...GCGTGAGTGAGAACGGGAAGCAAAGGAATACACGTGGGAACTAAAGAGAAAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp ATTTTTCTCTTTAGTTCCCACGTGTATTCCTTTGCTTCCCGTTCTCACTCACGCAGGGCCTCTTCCCGCTaGGGCAGATGTGGGCACACA +
Preference number: 4 (lower is better)
Translates to: IFLFSSHVYSFASRSHSRRASSR*GRCGHT
Trigger: TGTGTGCCCACATCTGCCCCAGCGGGAAGAGGCCCT...GCGTGAGTGAGAACGGGAAGCAAAGGAATACACGTGGGAACTAAAGAGAAAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR TCA 90 bp ATTTTTCTCTTTAGTTCCCACGTGTATTCCTTTGCTTCCCGTTCTCACTCACGCAAGAGGGAGGGCAGGTaGCCTGGGTACACAGTGACC +
Preference number: 4 (lower is better)
Translates to: IFLFSSHVYSFASRSHSRKREGR*PGYTVT
Trigger: GGTCACTGTGTACCCAGGTCACCTGCCCTCCCTCTT...GCGTGAGTGAGAACGGGAAGCAAAGGAATACACGTGGGAACTAAAGAGAAAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR GCA 90 bp ATTTTTCTCTTTAGTTCCCACGTGTATTCCTTTGCTTCCCGTTCTCACTCACGCGCAGACGATGCTGACTaGGTTGAGCGCCCCAGACGA +
Preference number: 4 (lower is better)
Translates to: IFLFSSHVYSFASRSHSRADDAD*VERPRR
Trigger: TCGTCTGGGGCGCTCAACGCAGTCAGCATCGTCTGC...GCGTGAGTGAGAACGGGAAGCAAAGGAATACACGTGGGAACTAAAGAGAAAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR GCA 90 bp GTTCCCACGTGTATTCCTTTGCTTCCCGTTCTCACTCACGCCTCCATCTCTCTACCACGTGTATTCCTTTaGTTCCCGTTCTCACTCACG +
Preference number: 4 (lower is better)
Translates to: VPTCIPLLPVLTHASISLPRVFL*FPFSLT
Trigger: CGTGAGTGAGAACGGGAAGCAAAGGAATACACGTGG...TAGAGAGATGGAGGCGTGAGTGAGAACGGGAAGCAAAGGAATACACGTGGGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR GCA 90 bp AGGCTGGTCATTTTTCTCTTTAGTTCCCACGTGTATTCCTTTGCTTCCCGTTCTTTGCCTGGGCTGGGGTaGAGTGGCGTGATCACGGTT +
Preference number: 4 (lower is better)
Translates to: RLVIFLFSSHVYSFASRSLPGLG*SGVITV
Trigger: AACCGTGATCACGCCACTGCACCCCAGCCCAGGCAA...AGAACGGGAAGCAAAGGAATACACGTGGGAACTAAAGAGAAAAATGACCAGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000216177.8
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp AGGCTGGTCATTTTTCTCTTTAGTTCCCACGTGTATTCCTTTGCTTCCCGTTCTTGGGCTGGGGTGCAGTaGCGTGATCACGGTTCACTG +
Preference number: 4 (lower is better)
Translates to: RLVIFLFSSHVYSFASRSWAGVQ*RDHGSL
Trigger: CAGTGAACCGTGATCACGCCACTGCACCCCAGCCCA...AGAACGGGAAGCAAAGGAATACACGTGGGAACTAAAGAGAAAAATGACCAGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000216177.8
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp GTTCCCACGTGTATTCCTTTGCTTCCCGTTCTCACTCACGCCTCCATCTCTCTATCCTTGACTTGCACATaGGGCACTTTCCAGTTGAGA +
Preference number: 4 (lower is better)
Translates to: VPTCIPLLPVLTHASISLSLTCT*GTFQLR
Trigger: TCTCAACTGGAAAGTGCCCCATGTGCAAGTCAAGGA...TAGAGAGATGGAGGCGTGAGTGAGAACGGGAAGCAAAGGAATACACGTGGGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR GCA 90 bp ATTTTTCTCTTTAGTTCCCACGTGTATTCCTTTGCTTCCCGTTCTCACTCACGCGGTGGAGGGGCAGTCTaGAAAGGGCAAGTTGTTGCT +
Preference number: 4 (lower is better)
Translates to: IFLFSSHVYSFASRSHSRGGGAV*KGQVVA
Trigger: AGCAACAACTTGCCCTTTGCAGACTGCCCCTCCACC...GCGTGAGTGAGAACGGGAAGCAAAGGAATACACGTGGGAACTAAAGAGAAAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216177.8
ENST00000597664.6
CDS-3UTR CCA 90 bp AGGCTGGTCATTTTTCTCTTTAGTTCCCACGTGTATTCCTTTGCTTCCCGTTCTATGTCCACTGTCCCATaGAAGGGCGACACCGTGATG +
Preference number: 4 (lower is better)
Translates to: RLVIFLFSSHVYSFASRSMSTVP*KGDTVM
Trigger: CATCACGGTGTCGCCCTTCCATGGGACAGTGGACAT...AGAACGGGAAGCAAAGGAATACACGTGGGAACTAAAGAGAAAAATGACCAGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp TTAGTTCCCACGTGTATTCCTTTGCTTCCCGTTCTCACTCACGCCTCCATCTCTTCCTTGACTTGCACATaGGGCACTTTCCAGTTGAGA +
Preference number: 4 (lower is better)
Translates to: LVPTCIPLLPVLTHASISSLTCT*GTFQLR
Trigger: TCTCAACTGGAAAGTGCCCCATGTGCAAGTCAAGGA...AGAGATGGAGGCGTGAGTGAGAACGGGAAGCAAAGGAATACACGTGGGAACTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR GCA 90 bp ATTTTTCTCTTTAGTTCCCACGTGTATTCCTTTGCTTCCCGTTCTCACTCACGCAGGACAGGTTCCATCTaGCCTCCTCCTCTAAGAAGC +
Preference number: 4 (lower is better)
Translates to: IFLFSSHVYSFASRSHSRRTGSI*PPPLRS
Trigger: GCTTCTTAGAGGAGGAGGGCAGATGGAACCTGTCCT...GCGTGAGTGAGAACGGGAAGCAAAGGAATACACGTGGGAACTAAAGAGAAAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR GCA 90 bp AGGCTGGTCATTTTTCTCTTTAGTTCCCACGTGTATTCCTTTGCTTCCCGTTCTACGTCACAAACCTTCTaGAGGAATGAGGCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: RLVIFLFSSHVYSFASRSTSQTF*RNEAVG
Trigger: CCCCACAGCCTCATTCCTGCAGAAGGTTTGTGACGT...AGAACGGGAAGCAAAGGAATACACGTGGGAACTAAAGAGAAAAATGACCAGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp GTTCCCACGTGTATTCCTTTGCTTCCCGTTCTCACTCACGCCTCCATCTCTCTATTCTCAGTGGAGATTTaGAAGCTGAAGTTGAAGACG +
Preference number: 4 (lower is better)
Translates to: VPTCIPLLPVLTHASISLFSVEI*KLKLKT
Trigger: CGTCTTCAACTTCAGCTTCCAAATCTCCACTGAGAA...TAGAGAGATGGAGGCGTGAGTGAGAACGGGAAGCAAAGGAATACACGTGGGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR TCA 90 bp ATTTTTCTCTTTAGTTCCCACGTGTATTCCTTTGCTTCCCGTTCTCACTCACGCAGTTGGGTACATCCTTaGCTTGCACATGGGGCACTT +
Preference number: 4 (lower is better)
Translates to: IFLFSSHVYSFASRSHSRSWVHP*LAHGAL
Trigger: AAGTGCCCCATGTGCAAGTCAAGGATGTACCCAACT...GCGTGAGTGAGAACGGGAAGCAAAGGAATACACGTGGGAACTAAAGAGAAAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR GCA 90 bp AGGCTGGTCATTTTTCTCTTTAGTTCCCACGTGTATTCCTTTGCTTCCCGTTCTGGTACATCCTTGACTTaGACATGGGGCACTTTCCAG +
Preference number: 4 (lower is better)
Translates to: RLVIFLFSSHVYSFASRSGTSLT*TWGTFQ
Trigger: CTGGAAAGTGCCCCATGTGCAAGTCAAGGATGTACC...AGAACGGGAAGCAAAGGAATACACGTGGGAACTAAAGAGAAAAATGACCAGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR GCA 90 bp ATTTTTCTCTTTAGTTCCCACGTGTATTCCTTTGCTTCCCGTTCTCACTCACGCCCACCAACCTTCTGCTaGGGAAGTAGATGTACTCGA +
Preference number: 4 (lower is better)
Translates to: IFLFSSHVYSFASRSHSRPPTFC*GSRCTR
Trigger: TCGAGTACATCTACTTCCGCAGCAGAAGGTTGGTGG...GCGTGAGTGAGAACGGGAAGCAAAGGAATACACGTGGGAACTAAAGAGAAAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
3UTR CAA 72 bp TGGTCATTTTTCTCTTTAGTTCCCACGTGTATTCCTTaGCTTCCCGTTCTCACTCACGCCTCCATCTCTCTA +
Preference number: 4 (lower is better)
Translates to: WSFFSLVPTCIP*LPVLTHASISL
Trigger: TAGAGAGATGGAGGCGTGAGTGAGAACGGGAAGCAAAGGAATACACGTGGGAACTAAAGAGAAAAATGACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CCA 90 bp ATTTTTCTCTTTAGTTCCCACGTGTATTCCTTTGCTTCCCGTTCTCACTCACGCCTATGCTGCCCAGGCTaGTCATTTTTCTCTTTAGTT +
Preference number: 4 (lower is better)
Translates to: IFLFSSHVYSFASRSHSRLCCPG*SFFSLV
Trigger: AACTAAAGAGAAAAATGACCAGCCTGGGCAGCATAG...GCGTGAGTGAGAACGGGAAGCAAAGGAATACACGTGGGAACTAAAGAGAAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS CCA 90 bp AGGAAGGGTCACTCCGTGACCCGGGATAGGGCCGGGATGCAGCCTTaGACGGGGCTGGGCCCAAATGTGGGCTCTGGAGGGAGCCGGGCT +
Preference number: 5 (lower is better)
Translates to: RKGHSVTRDRAGMQP*TGLGPNVGSGGSRA
Trigger: AGCCCGGCTCCCTCCAGAGCCCACATTTGGGCCCAGCCCCGTCCAAGGCTGCATCCCGGCCCTATCCCGGGTCACGGAGTGACCCTTCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS GCA 90 bp AAGGCCAGAGCAGGAATCAAGGGACACCAGTCACTGGGCTGGCCCTaGTCGGCCCCCTCAGGCCTGGTGGGTGGGCCCGAGCTCCTCTCT +
Preference number: 5 (lower is better)
Translates to: KARAGIKGHQSLGWP*SAPSGLVGGPELLS
Trigger: AGAGAGGAGCTCGGGCCCACCCACCAGGCCTGAGGGGGCCGAGCAGGGCCAGCCCAGTGACTGGTGTCCCTTGATTCCTGCTCTGGCCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS GCA 90 bp GATGGTGGAGGGGCAGTCGACCGACTTGCCGCAGACGATGCTGACTaGGTTGAGCGCCCCAGACGAGGAACCGTAGATGCGGCGGGCGCC +
Preference number: 5 (lower is better)
Translates to: DGGGAVDRLAADDAD*VERPRRGTVDAAGA
Trigger: GGCGCCCGCCGCATCTACGGTTCCTCGTCTGGGGCGCTCAACGCAGTCAGCATCGTCTGCGGCAAGTCGGTCGACTGCCCCTCCACCATC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381198.6
ENST00000593866.5
CDS CCA 90 bp AGGACAAAGGCCAGAGCAGGAATCAAGGGACACCAGTCACTGGGCTaGCCCTGCTCGGCCCCCTCAGGCCTGGTGGGTGGGCCCGAGCTC +
Preference number: 5 (lower is better)
Translates to: RTKARAGIKGHQSLG*PCSAPSGLVGGPEL
Trigger: GAGCTCGGGCCCACCCACCAGGCCTGAGGGGGCCGAGCAGGGCCAGCCCAGTGACTGGTGTCCCTTGATTCCTGCTCTGGCCTTTGTCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS CCA 90 bp CACACAGGACAAAGGCCAGAGCAGGAATCAAGGGACACCAGTCACTaGGCTGGCCCTGCTCGGCCCCCTCAGGCCTGGTGGGTGGGCCCG +
Preference number: 5 (lower is better)
Translates to: HTGQRPEQESRDTSH*AGPARPPQAWWVGP
Trigger: CGGGCCCACCCACCAGGCCTGAGGGGGCCGAGCAGGGCCAGCCCAGTGACTGGTGTCCCTTGATTCCTGCTCTGGCCTTTGTCCTGTGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CAA 90 bp AGGGCCTGGCCGGGGGCACAGCATGGGTCCCGTGCTGCCAATGGGGAGAGCAGTAGACAGGGGCTCACTTaGTTGCCTGGGCTGGGGTGC +
Preference number: 5 (lower is better)
Translates to: RAWPGAQHGSRAANGESSRQGLT*LPGLGC
Trigger: GCACCCCAGCCCAGGCAACAAAGTGAGCCCCTGTCT...ACTGCTCTCCCCATTGGCAGCACGGGACCCATGCTGTGCCCCCGGCCAGGCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000216177.8
ENST00000593866.5
ENST00000597664.6
CDS GCA 90 bp GTGGGAGCAGCAGAAGTCGACCGACTTGCCGCAGACGATGCTGACTaGGTTGAGCGCCCCAGACGAGGAACCGTAGATGCGGCGGGCGCC +
Preference number: 5 (lower is better)
Translates to: VGAAEVDRLAADDAD*VERPRRGTVDAAGA
Trigger: GGCGCCCGCCGCATCTACGGTTCCTCGTCTGGGGCGCTCAACGCAGTCAGCATCGTCTGCGGCAAGTCGGTCGACTTCTGCTGCTCCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216177.8
ENST00000438734.1
ENST00000597664.6
CDS-3UTR CAA 90 bp GGCCAGAGCAGGAATCAAGGGACACCAGTCACTGGGCTGGCCCTGCTCGGCCCCTTCAGCTCATGCAGGTaGGGGGAGGTGCTCTGGGGG +
Preference number: 5 (lower is better)
Translates to: GQSRNQGTPVTGLALLGPFSSCR*GEVLWG
Trigger: CCCCCAGAGCACCTCCCCCAACCTGCATGAGCTGAA...GGGGCCGAGCAGGGCCAGCCCAGTGACTGGTGTCCCTTGATTCCTGCTCTGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CAA 90 bp CAGGCTGCGCCCCAAGGAACGGGCTCCAAGCTGCAGGGTCTCCACGGAGATTGGGGGGTTGGAGGGGGCTaGTTTCCAGGACGCGAGTGG +
Preference number: 5 (lower is better)
Translates to: QAAPQGTGSKLQGLHGDWGVGGG*FPGREW
Trigger: CCACTCGCGTCCTGGAAACAAGCCCCCTCCAACCCC...CCAATCTCCGTGGAGACCCTGCAGCTTGGAGCCCGTTCCTTGGGGCGCAGCCTG
67% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS GCA 90 bp GTGCAGGGTAGCAGCAGGTACGTCAGCACCTGTCCAGGCCCCGAGTaGCAGAAGCGGGCCCACCGGCTGGGATCCCTCGTACATGCTTTC +
Preference number: 5 (lower is better)
Translates to: VQGSSRYVSTCPGPE*QKRAHRLGSLVHAF
Trigger: GAAAGCATGTACGAGGGATCCCAGCCGGTGGGCCCGCTTCTGGCACTCGGGGCCTGGACAGGTGCTGACGTACCTGCTGCTACCCTGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000438734.1
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CAA 90 bp CGGGCTCCAAGCTGCAGGGTCTCCACGGAGATTGGCAGGGCCTCTTCCCGCTGGACGATGCTGACTGCGTaGAGCGCCCCAGACGAGGAA +
Preference number: 5 (lower is better)
Translates to: RAPSCRVSTEIGRASSRWTMLTA*SAPDEE
Trigger: TTCCTCGTCTGGGGCGCTCAACGCAGTCAGCATCGT...CCAGCGGGAAGAGGCCCTGCCAATCTCCGTGGAGACCCTGCAGCTTGGAGCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CAA 90 bp GCCCCAAGGAACGGGCTCCAAGCTGCAGGGTCTCCACGGAGATTGGCAGGGCCTGGGCAGTCGACCGACTaGCCGCAGACGATGCTGACT +
Preference number: 5 (lower is better)
Translates to: APRNGLQAAGSPRRLAGPGQSTD*PQTMLT
Trigger: AGTCAGCATCGTCTGCGGCAAGTCGGTCGACTGCCC...AGGCCCTGCCAATCTCCGTGGAGACCCTGCAGCTTGGAGCCCGTTCCTTGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381198.6
ENST00000593866.5
CDS-3UTR CAA 90 bp CAGGCTGCGCCCCAAGGAACGGGCTCCAAGCTGCAGGGTCTCCACGGAGATTGGGGGCAGTCGACCGACTaGCCGCAGACGATGCTGACT +
Preference number: 5 (lower is better)
Translates to: QAAPQGTGSKLQGLHGDWGQSTD*PQTMLT
Trigger: AGTCAGCATCGTCTGCGGCAAGTCGGTCGACTGCCC...CCAATCTCCGTGGAGACCCTGCAGCTTGGAGCCCGTTCCTTGGGGCGCAGCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381198.6
ENST00000593866.5
CDS CCA 90 bp TCAGCACCTGTCCAGGCCCCGAGTGCCAGAAGCGGGCCCACCGGCTaGGATCCCTCGTACATGCTTTCTTCAGTGCAGCCTCCAGCTCTG +
Preference number: 5 (lower is better)
Translates to: SAPVQAPSARSGPTG*DPSYMLSSVQPPAL
Trigger: CAGAGCTGGAGGCTGCACTGAAGAAAGCATGTACGAGGGATCCCAGCCGGTGGGCCCGCTTCTGGCACTCGGGGCCTGGACAGGTGCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000438734.1
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CAA 90 bp GGGTCTCCACGGAGATTGGCAGGGCCTCTTCCCGCTGGGGCAGATGTGGGCACAACGATGCTGACTGCGTaGAGCGCCCCAGACGAGGAA +
Preference number: 5 (lower is better)
Translates to: GSPRRLAGPLPAGADVGTTMLTA*SAPDEE
Trigger: TTCCTCGTCTGGGGCGCTCAACGCAGTCAGCATCGT...TGTGCCCACATCTGCCCCAGCGGGAAGAGGCCCTGCCAATCTCCGTGGAGACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CAA 90 bp ACAGTGACCGGGGACATGCTGACAGGCTGCGCCCCAAGGAACGGGCTCCAAGCTTTCAGCTCATGCAGGTaGGGGGAGGTGCTCTGGGGG +
Preference number: 5 (lower is better)
Translates to: TVTGDMLTGCAPRNGLQAFSSCR*GEVLWG
Trigger: CCCCCAGAGCACCTCCCCCAACCTGCATGAGCTGAA...AGCTTGGAGCCCGTTCCTTGGGGCGCAGCCTGTCAGCATGTCCCCGGTCACTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CAA 90 bp ATGCTGACAGGCTGCGCCCCAAGGAACGGGCTCCAAGCTGCAGGGTCTCCACGGGGCATCCAGGTAGCCTaGTCTGCAGTTGTCGGCCAC +
Preference number: 5 (lower is better)
Translates to: MLTGCAPRNGLQAAGSPRGIQVA*SAVVGH
Trigger: GTGGCCGACAACTGCAGACAAGGCTACCTGGATGCC...CCGTGGAGACCCTGCAGCTTGGAGCCCGTTCCTTGGGGCGCAGCCTGTCAGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CAA 90 bp CCTGGGTACACAGTGACCGGGGACATGCTGACAGGCTGCGCCCCAAGGAACGGGCCAAGGAGCTGGGCCTaGGTCCTGGAGAAAACCTCG +
Preference number: 5 (lower is better)
Translates to: PGYTVTGDMLTGCAPRNGPRSWA*VLEKTS
Trigger: CGAGGTTTTCTCCAGGACCAAGGCCCAGCTCCTTGG...CCCGTTCCTTGGGGCGCAGCCTGTCAGCATGTCCCCGGTCACTGTGTACCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CAA 90 bp ACAGTGACCGGGGACATGCTGACAGGCTGCGCCCCAAGGAACGGGCTCCAAGCTTCAGTGACCAAGAAGTaGCGTCCGTCAGGCCAGCGG +
Preference number: 5 (lower is better)
Translates to: TVTGDMLTGCAPRNGLQASVTKK*RPSGQR
Trigger: CCGCTGGCCTGACGGACGCAACTTCTTGGTCACTGA...AGCTTGGAGCCCGTTCCTTGGGGCGCAGCCTGTCAGCATGTCCCCGGTCACTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216177.8
ENST00000597664.6
CDS-3UTR CAA 90 bp GTGACCTGGGTACACAGTGACCGGGGACATGCTGACAGGCTGCGCCCCAAGGAATTCAGCTCATGCAGGTaGGGGGAGGTGCTCTGGGGG +
Preference number: 5 (lower is better)
Translates to: VTWVHSDRGHADRLRPKEFSSCR*GEVLWG
Trigger: CCCCCAGAGCACCTCCCCCAACCTGCATGAGCTGAA...TTCCTTGGGGCGCAGCCTGTCAGCATGTCCCCGGTCACTGTGTACCCAGGTCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CAA 90 bp GGCCAGAGCAGGAATCAAGGGACACCAGTCACTGGGCTGGCCCTGCTCGGCCCCCATAGCACTGGTTCCTaGGTGAGTCCACGTCTCTCC +
Preference number: 5 (lower is better)
Translates to: GQSRNQGTPVTGLALLGPHSTGS*VSPRLS
Trigger: GGAGAGACGTGGACTCACCAAGGAACCAGTGCTATG...GGGGCCGAGCAGGGCCAGCCCAGTGACTGGTGTCCCTTGATTCCTGCTCTGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CAA 90 bp GGCCAGAGCAGGAATCAAGGGACACCAGTCACTGGGCTGGCCCTGCTCGGCCCCACCCCATCATCTCAGTaGGCTCCTCTGGTCTCTGAC +
Preference number: 5 (lower is better)
Translates to: GQSRNQGTPVTGLALLGPTPSSQ*APLVSD
Trigger: GTCAGAGACCAGAGGAGCCAACTGAGATGATGGGGT...GGGGCCGAGCAGGGCCAGCCCAGTGACTGGTGTCCCTTGATTCCTGCTCTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CAA 90 bp CAAGGAACGGGCTCCAAGCTGCAGGGTCTCCACGGAGATTGGCAGGGCCTCTTCAGACAGGGGCTCACTTaGTTGCCTGGGCTGGGGTGC +
Preference number: 5 (lower is better)
Translates to: QGTGSKLQGLHGDWQGLFRQGLT*LPGLGC
Trigger: GCACCCCAGCCCAGGCAACAAAGTGAGCCCCTGTCT...GAAGAGGCCCTGCCAATCTCCGTGGAGACCCTGCAGCTTGGAGCCCGTTCCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216177.8
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CAA 90 bp AGCTGCAGGGTCTCCACGGAGATTGGCAGGGCCTCTTCCCGCTGGGGCAGATGTCAGAAGTCGACCGACTaGCCGCAGACGATGCTGACT +
Preference number: 5 (lower is better)
Translates to: SCRVSTEIGRASSRWGRCQKSTD*PQTMLT
Trigger: AGTCAGCATCGTCTGCGGCAAGTCGGTCGACTTCTG...ACATCTGCCCCAGCGGGAAGAGGCCCTGCCAATCTCCGTGGAGACCCTGCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216177.8
ENST00000597664.6
CDS-3UTR CAA 90 bp CCTGGGTACACAGTGACCGGGGACATGCTGACAGGCTGCGCCCCAAGGAACGGGGCAAAGGGCAAGTTGTaGCTCAGAGCCCCATCGATG +
Preference number: 5 (lower is better)
Translates to: PGYTVTGDMLTGCAPRNGAKGKL*LRAPSM
Trigger: CATCGATGGGGCTCTGAGCAACAACTTGCCCTTTGC...CCCGTTCCTTGGGGCGCAGCCTGTCAGCATGTCCCCGGTCACTGTGTACCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000216177.8
ENST00000597664.6
CDS-3UTR CAA 90 bp GTGCTCCGTGGGCAGCTCCACGGCAGAACAGGAGCCCCTCTCCCCAGCAATGCTTCTGCAAAGGGCAAGTaGTTGCTCAGAGCCCCATCG +
Preference number: 5 (lower is better)
Translates to: VLRGQLHGRTGAPLPSNASAKGK*LLRAPS
Trigger: CGATGGGGCTCTGAGCAACAACTTGCCCTTTGCAGA...AGCATTGCTGGGGAGAGGGGCTCCTGTTCTGCCGTGGAGCTGCCCACGGAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216177.8
ENST00000597664.6
CDS-3UTR CAA 90 bp GGGCCACTGGGCCCAACAGAAGCACCCACAGCTGGGATCCTGAAAAGACCTGGATTCAGCTCATGCAGGTaGGGGGAGGTGCTCTGGGGG +
Preference number: 5 (lower is better)
Translates to: GPLGPTEAPTAGILKRPGFSSCR*GEVLWG
Trigger: CCCCCAGAGCACCTCCCCCAACCTGCATGAGCTGAA...TCCAGGTCTTTTCAGGATCCCAGCTGTGGGTGCTTCTGTTGGGCCCAGTGGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CAA 90 bp GTGACCTGGGTACACAGTGACCGGGGACATGCTGACAGGCTGCGCCCCAAGGAAGGCATCCAGGTAGCCTaGTCTGCAGTTGTCGGCCAC +
Preference number: 5 (lower is better)
Translates to: VTWVHSDRGHADRLRPKEGIQVA*SAVVGH
Trigger: GTGGCCGACAACTGCAGACAAGGCTACCTGGATGCC...TTCCTTGGGGCGCAGCCTGTCAGCATGTCCCCGGTCACTGTGTACCCAGGTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CAA 90 bp GCCCCAAGGAACGGGCTCCAAGCTGCAGGGTCTCCACGGAGATTGGCAGGGCCTCATAGCACTGGTTCCTaGGTGAGTCCACGTCTCTCC +
Preference number: 5 (lower is better)
Translates to: APRNGLQAAGSPRRLAGPHSTGS*VSPRLS
Trigger: GGAGAGACGTGGACTCACCAAGGAACCAGTGCTATG...AGGCCCTGCCAATCTCCGTGGAGACCCTGCAGCTTGGAGCCCGTTCCTTGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CAA 90 bp AGGGCCTGGCCGGGGGCACAGCATGGGTCCCGTGCTGCCAATGGGGAGAGCAGTAAGTTGGGTACATCCTaGACTTGCACATGGGGCACT +
Preference number: 5 (lower is better)
Translates to: RAWPGAQHGSRAANGESSKLGTS*TCTWGT
Trigger: AGTGCCCCATGTGCAAGTCAAGGATGTACCCAACTT...ACTGCTCTCCCCATTGGCAGCACGGGACCCATGCTGTGCCCCCGGCCAGGCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CAA 90 bp AGGGCCTGGCCGGGGGCACAGCATGGGTCCCGTGCTGCCAATGGGGAGAGCAGTGAGAGCTGCTCAAAGTaGGGTACATCCTTGACTTGC +
Preference number: 5 (lower is better)
Translates to: RAWPGAQHGSRAANGESSESCSK*GTSLTC
Trigger: GCAAGTCAAGGATGTACCCAACTTTGAGCAGCTCTC...ACTGCTCTCCCCATTGGCAGCACGGGACCCATGCTGTGCCCCCGGCCAGGCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CAA 90 bp CAAGGAACGGGCTCCAAGCTGCAGGGTCTCCACGGAGATTGGCAGGGCCTCTTCCCAAGGAGCTGGGCCTaGGTCCTGGAGAAAACCTCG +
Preference number: 5 (lower is better)
Translates to: QGTGSKLQGLHGDWQGLFPRSWA*VLEKTS
Trigger: CGAGGTTTTCTCCAGGACCAAGGCCCAGCTCCTTGG...GAAGAGGCCCTGCCAATCTCCGTGGAGACCCTGCAGCTTGGAGCCCGTTCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CAA 90 bp CCACGGAGATTGGCAGGGCCTCTTCCCGCTGGGGCAGATGTGGGCACACAGGACACCCCATCATCTCAGTaGGCTCCTCTGGTCTCTGAC +
Preference number: 5 (lower is better)
Translates to: PRRLAGPLPAGADVGTQDTPSSQ*APLVSD
Trigger: GTCAGAGACCAGAGGAGCCAACTGAGATGATGGGGT...GTCCTGTGTGCCCACATCTGCCCCAGCGGGAAGAGGCCCTGCCAATCTCCGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CAA 90 bp ACCTTCTGCAGGAATGAGGCTGTGGGGATAGCAGGGGCCACTGGGCCCAACAGAGGCATCCAGGTAGCCTaGTCTGCAGTTGTCGGCCAC +
Preference number: 5 (lower is better)
Translates to: TFCRNEAVGIAGATGPNRGIQVA*SAVVGH
Trigger: GTGGCCGACAACTGCAGACAAGGCTACCTGGATGCC...TCTGTTGGGCCCAGTGGCCCCTGCTATCCCCACAGCCTCATTCCTGCAGAAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CAA 90 bp GTGCTCCGTGGGCAGCTCCACGGCAGAACAGGAGCCCCTCTCCCCAGCAATGCTGGGTACATCCTTGACTaGCACATGGGGCACTTTCCA +
Preference number: 5 (lower is better)
Translates to: VLRGQLHGRTGAPLPSNAGYILD*HMGHFP
Trigger: TGGAAAGTGCCCCATGTGCAAGTCAAGGATGTACCC...AGCATTGCTGGGGAGAGGGGCTCCTGTTCTGCCGTGGAGCTGCCCACGGAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CAA 90 bp GGGTCTCCACGGAGATTGGCAGGGCCTCTTCCCGCTGGGGCAGATGTGGGCACAGGGTACATCCTTGACTaGCACATGGGGCACTTTCCA +
Preference number: 5 (lower is better)
Translates to: GSPRRLAGPLPAGADVGTGYILD*HMGHFP
Trigger: TGGAAAGTGCCCCATGTGCAAGTCAAGGATGTACCC...TGTGCCCACATCTGCCCCAGCGGGAAGAGGCCCTGCCAATCTCCGTGGAGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CAA 90 bp ATGCTGACAGGCTGCGCCCCAAGGAACGGGCTCCAAGCTGCAGGGTCTCCACGGCCCACGTGTATTCCTTaGCTTCCCGTTCTCACTCAC +
Preference number: 5 (lower is better)
Translates to: MLTGCAPRNGLQAAGSPRPTCIP*LPVLTH
Trigger: GTGAGTGAGAACGGGAAGCAAAGGAATACACGTGGG...CCGTGGAGACCCTGCAGCTTGGAGCCCGTTCCTTGGGGCGCAGCCTGTCAGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS TCA 90 bp TGCTCTGGGGGCAGATGTCCACTGTCCCATGGAAGGGCGACACCGTaGTGGTGGAGGGGCAGTCTGCAAAGGGCAAGTTGTTGCTCAGAG +
Preference number: 5 (lower is better)
Translates to: CSGGRCPLSHGRATP*WWRGSLQRASCCSE
Trigger: CTCTGAGCAACAACTTGCCCTTTGCAGACTGCCCCTCCACCATCACGGTGTCGCCCTTCCATGGGACAGTGGACATCTGCCCCCAGAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216177.8
ENST00000597664.6
CDS GCA 90 bp CACTGTCCCATGGAAGGGCGACACCGTGATGGTGGAGGGGCAGTCTaGAAAGGGCAAGTTGTTGCTCAGAGCCCCATCGATGTAGCGCTC +
Preference number: 5 (lower is better)
Translates to: HCPMEGRHRDGGGAV*KGQVVAQSPIDVAL
Trigger: GAGCGCTACATCGATGGGGCTCTGAGCAACAACTTGCCCTTTGCAGACTGCCCCTCCACCATCACGGTGTCGCCCTTCCATGGGACAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216177.8
ENST00000597664.6
CDS GCA 90 bp CCACCAACCTTCTGCTGCGGAAGTAGATGTACTCGAAGGGCAGTGTaGAGGGTAGCAGCAGGTACGTCAGCACCTGTCCAGGCCCCGAGT +
Preference number: 5 (lower is better)
Translates to: PPTFCCGSRCTRRAV*RVAAGTSAPVQAPS
Trigger: ACTCGGGGCCTGGACAGGTGCTGACGTACCTGCTGCTACCCTGCACACTGCCCTTCGAGTACATCTACTTCCGCAGCAGAAGGTTGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CAA 90 bp GTGCTCCGTGGGCAGCTCCACGGCAGAACAGGAGCCCCTCTCCCCAGCAATGCTGAGAGCTGCTCAAAGTaGGGTACATCCTTGACTTGC +
Preference number: 5 (lower is better)
Translates to: VLRGQLHGRTGAPLPSNAESCSK*GTSLTC
Trigger: GCAAGTCAAGGATGTACCCAACTTTGAGCAGCTCTC...AGCATTGCTGGGGAGAGGGGCTCCTGTTCTGCCGTGGAGCTGCCCACGGAGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CAA 90 bp AGCTGCAGGGTCTCCACGGAGATTGGCAGGGCCTCTTCCCGCTGGGGCAGATGTCCCACGTGTATTCCTTaGCTTCCCGTTCTCACTCAC +
Preference number: 5 (lower is better)
Translates to: SCRVSTEIGRASSRWGRCPTCIP*LPVLTH
Trigger: GTGAGTGAGAACGGGAAGCAAAGGAATACACGTGGG...ACATCTGCCCCAGCGGGAAGAGGCCCTGCCAATCTCCGTGGAGACCCTGCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CAA 90 bp CCCTGGCATCCTCTCTGCCCCAGGTACAGGCACAGCTACGTCACAAACCTTCTGCAGAAGTCGACCGACTaGCCGCAGACGATGCTGACT +
Preference number: 5 (lower is better)
Translates to: PWHPLCPRYRHSYVTNLLQKSTD*PQTMLT
Trigger: AGTCAGCATCGTCTGCGGCAAGTCGGTCGACTTCTG...CAGAAGGTTTGTGACGTAGCTGTGCCTGTACCTGGGGCAGAGAGGATGCCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216177.8
ENST00000597664.6
CDS-3UTR CAA 90 bp CTTTCTCAATCTTCTGTGAGGTGCTCCGTGGGCAGCTCCACGGCAGAACAGGAGCCAAGGAGCTGGGCCTaGGTCCTGGAGAAAACCTCG +
Preference number: 5 (lower is better)
Translates to: LSQSSVRCSVGSSTAEQEPRSWA*VLEKTS
Trigger: CGAGGTTTTCTCCAGGACCAAGGCCCAGCTCCTTGG...CTCCTGTTCTGCCGTGGAGCTGCCCACGGAGCACCTCACAGAAGATTGAGAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CAA 90 bp CCCACGTGTATTCCTTTGCTTCCCGTTCTCACTCACGCCTCCATCTCTCTAACCGGGGTTGGAGGGGGCTaGTTTCCAGGACGCGAGTGG +
Preference number: 5 (lower is better)
Translates to: PTCIPLLPVLTHASISLTGVGGG*FPGREW
Trigger: CCACTCGCGTCCTGGAAACAAGCCCCCTCCAACCCC...GGTTAGAGAGATGGAGGCGTGAGTGAGAACGGGAAGCAAAGGAATACACGTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CAA 90 bp ACCTTCTGCAGGAATGAGGCTGTGGGGATAGCAGGGGCCACTGGGCCCAACAGAACCCCATCATCTCAGTaGGCTCCTCTGGTCTCTGAC +
Preference number: 5 (lower is better)
Translates to: TFCRNEAVGIAGATGPNRTPSSQ*APLVSD
Trigger: GTCAGAGACCAGAGGAGCCAACTGAGATGATGGGGT...TCTGTTGGGCCCAGTGGCCCCTGCTATCCCCACAGCCTCATTCCTGCAGAAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CAA 90 bp GTGACCTGGGTACACAGTGACCGGGGACATGCTGACAGGCTGCGCCCCAAGGAACCCACGTGTATTCCTTaGCTTCCCGTTCTCACTCAC +
Preference number: 5 (lower is better)
Translates to: VTWVHSDRGHADRLRPKEPTCIP*LPVLTH
Trigger: GTGAGTGAGAACGGGAAGCAAAGGAATACACGTGGG...TTCCTTGGGGCGCAGCCTGTCAGCATGTCCCCGGTCACTGTGTACCCAGGTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CAA 90 bp CGGGGGCACAGCATGGGTCCCGTGCTGCCAATGGGGAGAGCAGTGACTCGTGGAATTTGGAAGCTGAAGTaGAAGACGTTCAGCTCATGC +
Preference number: 5 (lower is better)
Translates to: RGHSMGPVLPMGRAVTRGIWKLK*KTFSSC
Trigger: GCATGAGCTGAACGTCTTCAACTTCAGCTTCCAAAT...TCCACGAGTCACTGCTCTCCCCATTGGCAGCACGGGACCCATGCTGTGCCCCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CAA 90 bp ACCTTCTGCAGGAATGAGGCTGTGGGGATAGCAGGGGCCACTGGGCCCAACAGAGGGTACATCCTTGACTaGCACATGGGGCACTTTCCA +
Preference number: 5 (lower is better)
Translates to: TFCRNEAVGIAGATGPNRGYILD*HMGHFP
Trigger: TGGAAAGTGCCCCATGTGCAAGTCAAGGATGTACCC...TCTGTTGGGCCCAGTGGCCCCTGCTATCCCCACAGCCTCATTCCTGCAGAAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CAA 90 bp GTTCCCACGTGTATTCCTTTGCTTCCCGTTCTCACTCACGCCTCCATCTCTCTAGGGGTTGGAGGGGGCTaGTTTCCAGGACGCGAGTGG +
Preference number: 5 (lower is better)
Translates to: VPTCIPLLPVLTHASISLGVGGG*FPGREW
Trigger: CCACTCGCGTCCTGGAAACAAGCCCCCTCCAACCCC...TAGAGAGATGGAGGCGTGAGTGAGAACGGGAAGCAAAGGAATACACGTGGGAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CAA 90 bp CCCTGGCATCCTCTCTGCCCCAGGTACAGGCACAGCTACGTCACAAACCTTCTGACCCCATCATCTCAGTaGGCTCCTCTGGTCTCTGAC +
Preference number: 5 (lower is better)
Translates to: PWHPLCPRYRHSYVTNLLTPSSQ*APLVSD
Trigger: GTCAGAGACCAGAGGAGCCAACTGAGATGATGGGGT...CAGAAGGTTTGTGACGTAGCTGTGCCTGTACCTGGGGCAGAGAGGATGCCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CAA 90 bp GGGCCACTGGGCCCAACAGAAGCACCCACAGCTGGGATCCTGAAAAGACCTGGACCCACGTGTATTCCTTaGCTTCCCGTTCTCACTCAC +
Preference number: 5 (lower is better)
Translates to: GPLGPTEAPTAGILKRPGPTCIP*LPVLTH
Trigger: GTGAGTGAGAACGGGAAGCAAAGGAATACACGTGGG...TCCAGGTCTTTTCAGGATCCCAGCTGTGGGTGCTTCTGTTGGGCCCAGTGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CAA 90 bp GGGCCACTGGGCCCAACAGAAGCACCCACAGCTGGGATCCTGAAAAGACCTGGAAAGTTGGGTACATCCTaGACTTGCACATGGGGCACT +
Preference number: 5 (lower is better)
Translates to: GPLGPTEAPTAGILKRPGKLGTS*TCTWGT
Trigger: AGTGCCCCATGTGCAAGTCAAGGATGTACCCAACTT...TCCAGGTCTTTTCAGGATCCCAGCTGTGGGTGCTTCTGTTGGGCCCAGTGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS GCA 90 bp TTCTCAGTGGAGATTTGGAAGCTGAAGTTGAAGACGTTCAGCTCATaGAGGTTGGGGGAGGTGCTCTGGGGGCAGATGTCCACTGTCCCA +
Preference number: 5 (lower is better)
Translates to: FSVEIWKLKLKTFSS*RLGEVLWGQMSTVP
Trigger: TGGGACAGTGGACATCTGCCCCCAGAGCACCTCCCCCAACCTGCATGAGCTGAACGTCTTCAACTTCAGCTTCCAAATCTCCACTGAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CAA 90 bp GCCACTGGGCCCAACAGAAGCACCCACAGCTGGGATCCTGAAAAGACCTGGACCATTTGGAAGCTGAAGTaGAAGACGTTCAGCTCATGC +
Preference number: 5 (lower is better)
Translates to: ATGPNRSTHSWDPEKTWTIWKLK*KTFSSC
Trigger: GCATGAGCTGAACGTCTTCAACTTCAGCTTCCAAAT...GGTCCAGGTCTTTTCAGGATCCCAGCTGTGGGTGCTTCTGTTGGGCCCAGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CAA 90 bp TTAGTTCCCACGTGTATTCCTTTGCTTCCCGTTCTCACTCACGCCTCCATCTCTGGCATCCAGGTAGCCTaGTCTGCAGTTGTCGGCCAC +
Preference number: 5 (lower is better)
Translates to: LVPTCIPLLPVLTHASISGIQVA*SAVVGH
Trigger: GTGGCCGACAACTGCAGACAAGGCTACCTGGATGCC...AGAGATGGAGGCGTGAGTGAGAACGGGAAGCAAAGGAATACACGTGGGAACTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CAA 90 bp CCCTGGCATCCTCTCTGCCCCAGGTACAGGCACAGCTACGTCACAAACCTTCTGATTTGGAAGCTGAAGTaGAAGACGTTCAGCTCATGC +
Preference number: 5 (lower is better)
Translates to: PWHPLCPRYRHSYVTNLLIWKLK*KTFSSC
Trigger: GCATGAGCTGAACGTCTTCAACTTCAGCTTCCAAAT...CAGAAGGTTTGTGACGTAGCTGTGCCTGTACCTGGGGCAGAGAGGATGCCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CAA 90 bp TTAGTTCCCACGTGTATTCCTTTGCTTCCCGTTCTCACTCACGCCTCCATCTCTGCAAAGGGCAAGTTGTaGCTCAGAGCCCCATCGATG +
Preference number: 5 (lower is better)
Translates to: LVPTCIPLLPVLTHASISAKGKL*LRAPSM
Trigger: CATCGATGGGGCTCTGAGCAACAACTTGCCCTTTGC...AGAGATGGAGGCGTGAGTGAGAACGGGAAGCAAAGGAATACACGTGGGAACTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216177.8
ENST00000597664.6
CDS-3UTR CAA 90 bp TTAGTTCCCACGTGTATTCCTTTGCTTCCCGTTCTCACTCACGCCTCCATCTCTCATAGCACTGGTTCCTaGGTGAGTCCACGTCTCTCC +
Preference number: 5 (lower is better)
Translates to: LVPTCIPLLPVLTHASISHSTGS*VSPRLS
Trigger: GGAGAGACGTGGACTCACCAAGGAACCAGTGCTATG...AGAGATGGAGGCGTGAGTGAGAACGGGAAGCAAAGGAATACACGTGGGAACTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CAA 90 bp GTTCCCACGTGTATTCCTTTGCTTCCCGTTCTCACTCACGCCTCCATCTCTCTAGGGTACATCCTTGACTaGCACATGGGGCACTTTCCA +
Preference number: 5 (lower is better)
Translates to: VPTCIPLLPVLTHASISLGYILD*HMGHFP
Trigger: TGGAAAGTGCCCCATGTGCAAGTCAAGGATGTACCC...TAGAGAGATGGAGGCGTGAGTGAGAACGGGAAGCAAAGGAATACACGTGGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CAA 90 bp ATTTTTCTCTTTAGTTCCCACGTGTATTCCTTTGCTTCCCGTTCTCACTCACGCCCAAGGAGCTGGGCCTaGGTCCTGGAGAAAACCTCG +
Preference number: 5 (lower is better)
Translates to: IFLFSSHVYSFASRSHSRPRSWA*VLEKTS
Trigger: CGAGGTTTTCTCCAGGACCAAGGCCCAGCTCCTTGG...GCGTGAGTGAGAACGGGAAGCAAAGGAATACACGTGGGAACTAAAGAGAAAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS CCA 90 bp GGTATGAGACATATGAGCCCCAGGAAGAAGTTCTCAGTGGAGATTTaGAAGCTGAAGTTGAAGACGTTCAGCTCATGCAGGTTGGGGGAG +
Preference number: 5 (lower is better)
Translates to: GMRHMSPRKKFSVEI*KLKLKTFSSCRLGE
Trigger: CTCCCCCAACCTGCATGAGCTGAACGTCTTCAACTTCAGCTTCCAAATCTCCACTGAGAACTTCTTCCTGGGGCTCATATGTCTCATACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CAA 90 bp TTAGTTCCCACGTGTATTCCTTTGCTTCCCGTTCTCACTCACGCCTCCATCTCTGAGAGCTGCTCAAAGTaGGGTACATCCTTGACTTGC +
Preference number: 5 (lower is better)
Translates to: LVPTCIPLLPVLTHASISESCSK*GTSLTC
Trigger: GCAAGTCAAGGATGTACCCAACTTTGAGCAGCTCTC...AGAGATGGAGGCGTGAGTGAGAACGGGAAGCAAAGGAATACACGTGGGAACTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CAA 90 bp ATTTTTCTCTTTAGTTCCCACGTGTATTCCTTTGCTTCCCGTTCTCACTCACGCTCTGCAAAGGGCAAGTaGTTGCTCAGAGCCCCATCG +
Preference number: 5 (lower is better)
Translates to: IFLFSSHVYSFASRSHSRSAKGK*LLRAPS
Trigger: CGATGGGGCTCTGAGCAACAACTTGCCCTTTGCAGA...GCGTGAGTGAGAACGGGAAGCAAAGGAATACACGTGGGAACTAAAGAGAAAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216177.8
ENST00000597664.6
CDS-3UTR CAA 90 bp AGGCTGGTCATTTTTCTCTTTAGTTCCCACGTGTATTCCTTTGCTTCCCGTTCTAAGTTGGGTACATCCTaGACTTGCACATGGGGCACT +
Preference number: 5 (lower is better)
Translates to: RLVIFLFSSHVYSFASRSKLGTS*TCTWGT
Trigger: AGTGCCCCATGTGCAAGTCAAGGATGTACCCAACTT...AGAACGGGAAGCAAAGGAATACACGTGGGAACTAAAGAGAAAAATGACCAGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS-3UTR CAA 90 bp ATTTTTCTCTTTAGTTCCCACGTGTATTCCTTTGCTTCCCGTTCTCACTCACGCGAGAGCTGCTCAAAGTaGGGTACATCCTTGACTTGC +
Preference number: 5 (lower is better)
Translates to: IFLFSSHVYSFASRSHSRESCSK*GTSLTC
Trigger: GCAAGTCAAGGATGTACCCAACTTTGAGCAGCTCTC...GCGTGAGTGAGAACGGGAAGCAAAGGAATACACGTGGGAACTAAAGAGAAAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS CCA 72 bp CCCGGGATAGGGCCGGGATGCAGCCTTGGACGGGGCTaGGCCCAAATGTGGGCTCTGGAGGGAGCCGGGCTG +
Preference number: 6 (lower is better)
Translates to: PGIGPGCSLGRG*AQMWALEGAGL
Trigger: CAGCCCGGCTCCCTCCAGAGCCCACATTTGGGCCCAGCCCCGTCCAAGGCTGCATCCCGGCCCTATCCCGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS GCA 72 bp GCAGGAATCAAGGGACACCAGTCACTGGGCTGGCCCTaGTCGGCCCCCTCAGGCCTGGTGGGTGGGCCCGAG +
Preference number: 6 (lower is better)
Translates to: AGIKGHQSLGWP*SAPSGLVGGPE
Trigger: CTCGGGCCCACCCACCAGGCCTGAGGGGGCCGAGCAGGGCCAGCCCAGTGACTGGTGTCCCTTGATTCCTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS CCA 72 bp GGGCTGGCCCTGCTCGGCCCCCTCAGGCCTGGTGGGTaGGCCCGAGCTCCTCTCTATGAGGAGCTATCTGGG +
Preference number: 6 (lower is better)
Translates to: GLALLGPLRPGG*ARAPLYEELSG
Trigger: CCCAGATAGCTCCTCATAGAGAGGAGCTCGGGCCCACCCACCAGGCCTGAGGGGGCCGAGCAGGGCCAGCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS GCA 72 bp AGAAGTTGCGTCCGTCAGGCCAGCGGGTCAGCGAAATaGCCAGCCGCTGGGAGGCCAGGACGTGGGCGTCGG +
Preference number: 6 (lower is better)
Translates to: RSCVRQASGSAK*PAAGRPGRGRR
Trigger: CCGACGCCCACGTCCTGGCCTCCCAGCGGCTGGGCATTTCGCTGACCCGCTGGCCTGACGGACGCAACTTCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216177.8
ENST00000438734.1
ENST00000597664.6
CDS CCA 72 bp CACTCCGTGACCCGGGATAGGGCCGGGATGCAGCCTTaGACGGGGCTGGGCCCAAATGTGGGCTCTGGAGGG +
Preference number: 6 (lower is better)
Translates to: HSVTRDRAGMQP*TGLGPNVGSGG
Trigger: CCCTCCAGAGCCCACATTTGGGCCCAGCCCCGTCCAAGGCTGCATCCCGGCCCTATCCCGGGTCACGGAGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000438734.1
ENST00000593866.5
ENST00000597664.6
CDS CCA 72 bp GCCAGAGCAGGAATCAAGGGACACCAGTCACTGGGCTaGCCCTGCTCGGCCCCCTCAGGCCTGGTGGGTGGG +
Preference number: 6 (lower is better)
Translates to: ARAGIKGHQSLG*PCSAPSGLVGG
Trigger: CCCACCCACCAGGCCTGAGGGGGCCGAGCAGGGCCAGCCCAGTGACTGGTGTCCCTTGATTCCTGCTCTGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS CCA 72 bp CAAAGGCCAGAGCAGGAATCAAGGGACACCAGTCACTaGGCTGGCCCTGCTCGGCCCCCTCAGGCCTGGTGG +
Preference number: 6 (lower is better)
Translates to: QRPEQESRDTSH*AGPARPPQAWW
Trigger: CCACCAGGCCTGAGGGGGCCGAGCAGGGCCAGCCCAGTGACTGGTGTCCCTTGATTCCTGCTCTGGCCTTTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS GCA 72 bp GGGGCAGTCGACCGACTTGCCGCAGACGATGCTGACTaGGTTGAGCGCCCCAGACGAGGAACCGTAGATGCG +
Preference number: 6 (lower is better)
Translates to: GAVDRLAADDAD*VERPRRGTVDA
Trigger: CGCATCTACGGTTCCTCGTCTGGGGCGCTCAACGCAGTCAGCATCGTCTGCGGCAAGTCGGTCGACTGCCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381198.6
ENST00000593866.5
CDS CCA 72 bp GTCCAGGCCCCGAGTGCCAGAAGCGGGCCCACCGGCTaGGATCCCTCGTACATGCTTTCTTCAGTGCAGCCT +
Preference number: 6 (lower is better)
Translates to: VQAPSARSGPTG*DPSYMLSSVQP
Trigger: AGGCTGCACTGAAGAAAGCATGTACGAGGGATCCCAGCCGGTGGGCCCGCTTCTGGCACTCGGGGCCTGGAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000438734.1
ENST00000593866.5
ENST00000597664.6
CDS CAA 72 bp GTGGCCGGAGGGCTGATGGGCCCAAGGAGCTGGGCCTaGGTCCTGGAGAAAACCTCGAGGGCCATGTTCCTC +
Preference number: 6 (lower is better)
Translates to: VAGGLMGPRSWA*VLEKTSRAMFL
Trigger: GAGGAACATGGCCCTCGAGGTTTTCTCCAGGACCAAGGCCCAGCTCCTTGGGCCCATCAGCCCTCCGGCCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS CAA 90 bp CTGGTGGGTGGGCCCGAGCTCCTCTCTATGAGGAGCTATCTGGGGTaGGAGGGGGCTTGTTTCCAGGACGCGAGTGGCCGGAGGGCTGAT +
Preference number: 6 (lower is better)
Translates to: LVGGPELLSMRSYLG*EGACFQDASGRRAD
Trigger: ATCAGCCCTCCGGCCACTCGCGTCCTGGAAACAAGCCCCCTCCAACCCCAGATAGCTCCTCATAGAGAGGAGCTCGGGCCCACCCACCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS TCA 72 bp CCTCAGGCCTGGTGGGTGGGCCCGAGCTCCTCTCTATaGGGAGCTATCTGGGGTTGGAGGGGGCTTGTTTCC +
Preference number: 6 (lower is better)
Translates to: PQAWWVGPSSSL*GAIWGWRGLVS
Trigger: GGAAACAAGCCCCCTCCAACCCCAGATAGCTCCTCATAGAGAGGAGCTCGGGCCCACCCACCAGGCCTGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS TCA 72 bp GGCAGATGTCCACTGTCCCATGGAAGGGCGACACCGTaGTGGTGGAGGGGCAGTCGACCGACTTGCCGCAGA +
Preference number: 6 (lower is better)
Translates to: GRCPLSHGRATP*WWRGSRPTCRR
Trigger: TCTGCGGCAAGTCGGTCGACTGCCCCTCCACCATCACGGTGTCGCCCTTCCATGGGACAGTGGACATCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381198.6
ENST00000593866.5
CDS CAA 90 bp GCCTGGATGAGCTCATCGCAGGTGGCGAAGTCAGTGACCAAGAAGTaGCGTCCGTCAGGCCAGCGGGTCAGCGAAATGCCCAGCCGCTGG +
Preference number: 6 (lower is better)
Translates to: AWMSSSQVAKSVTKK*RPSGQRVSEMPSRW
Trigger: CCAGCGGCTGGGCATTTCGCTGACCCGCTGGCCTGACGGACGCAACTTCTTGGTCACTGACTTCGCCACCTGCGATGAGCTCATCCAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216177.8
ENST00000597664.6
CDS CAA 90 bp ACCTGGATGAGCTCATCGCAGGTGGCGAAGTCAGTGACCAAGAAGTaGCGTCCGTCAGGCCAGCGGGTCAGCGAAATGCCCAGCCGCTGG +
Preference number: 6 (lower is better)
Translates to: TWMSSSQVAKSVTKK*RPSGQRVSEMPSRW
Trigger: CCAGCGGCTGGGCATTTCGCTGACCCGCTGGCCTGACGGACGCAACTTCTTGGTCACTGACTTCGCCACCTGCGATGAGCTCATCCAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438734.1
CDS GCA 72 bp GCAGAAGTCGACCGACTTGCCGCAGACGATGCTGACTaGGTTGAGCGCCCCAGACGAGGAACCGTAGATGCG +
Preference number: 6 (lower is better)
Translates to: AEVDRLAADDAD*VERPRRGTVDA
Trigger: CGCATCTACGGTTCCTCGTCTGGGGCGCTCAACGCAGTCAGCATCGTCTGCGGCAAGTCGGTCGACTTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216177.8
ENST00000438734.1
ENST00000597664.6
CDS CAA 72 bp ACGTCTCTCCAGGAACCTCAGGGCATCCAGGTAGCCTaGTCTGCAGTTGTCGGCCACTACCTCGAGGCTGGG +
Preference number: 6 (lower is better)
Translates to: TSLQEPQGIQVA*SAVVGHYLEAG
Trigger: CCCAGCCTCGAGGTAGTGGCCGACAACTGCAGACAAGGCTACCTGGATGCCCTGAGGTTCCTGGAGAGACGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS TCA 72 bp GGCAGATGTCCACTGTCCCATGGAAGGGCGACACCGTaGTGGTGGAGGGGCAGTCTGCAAAGGGCAAGTTGT +
Preference number: 6 (lower is better)
Translates to: GRCPLSHGRATP*WWRGSLQRASC
Trigger: ACAACTTGCCCTTTGCAGACTGCCCCTCCACCATCACGGTGTCGCCCTTCCATGGGACAGTGGACATCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216177.8
ENST00000597664.6
CDS GCA 72 bp ATGGAAGGGCGACACCGTGATGGTGGAGGGGCAGTCTaGAAAGGGCAAGTTGTTGCTCAGAGCCCCATCGAT +
Preference number: 6 (lower is better)
Translates to: MEGRHRDGGGAV*KGQVVAQSPID
Trigger: ATCGATGGGGCTCTGAGCAACAACTTGCCCTTTGCAGACTGCCCCTCCACCATCACGGTGTCGCCCTTCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216177.8
ENST00000597664.6
CDS CAA 72 bp ACGTCTCTCCAGGAACCTCAGGGCATCCAGGTAGCCTaGTCTGCAGTTGTCGGCCACTACCTGGATGAGCTC +
Preference number: 6 (lower is better)
Translates to: TSLQEPQGIQVA*SAVVGHYLDEL
Trigger: GAGCTCATCCAGGTAGTGGCCGACAACTGCAGACAAGGCTACCTGGATGCCCTGAGGTTCCTGGAGAGACGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438734.1
CDS GCA 72 bp TTCTGCTGCGGAAGTAGATGTACTCGAAGGGCAGTGTaGAGGGTAGCAGCAGGTACGTCAGCACCTGTCCAG +
Preference number: 6 (lower is better)
Translates to: FCCGSRCTRRAV*RVAAGTSAPVQ
Trigger: CTGGACAGGTGCTGACGTACCTGCTGCTACCCTGCACACTGCCCTTCGAGTACATCTACTTCCGCAGCAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000438734.1
ENST00000593866.5
ENST00000597664.6
CDS CAA 72 bp TGGAAGCTGAAGTTGAAGACGTTCAGCTCATGCAGGTaGGGGGAGGTGCTCTGGGGGCAGATGTCCACTGTC +
Preference number: 6 (lower is better)
Translates to: WKLKLKTFSSCR*GEVLWGQMSTV
Trigger: GACAGTGGACATCTGCCCCCAGAGCACCTCCCCCAACCTGCATGAGCTGAACGTCTTCAACTTCAGCTTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS CAA 90 bp GTGGAGATTTGGAAGCTGAAGTTGAAGACGTTCAGCTCATGCAGGTaGGGGGAGGTGCTCTGGGGGCAGATGTCCACTGTCCCATGGAAG +
Preference number: 6 (lower is better)
Translates to: VEIWKLKLKTFSSCR*GEVLWGQMSTVPWK
Trigger: CTTCCATGGGACAGTGGACATCTGCCCCCAGAGCACCTCCCCCAACCTGCATGAGCTGAACGTCTTCAACTTCAGCTTCCAAATCTCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS GCA 72 bp GAGATTTGGAAGCTGAAGTTGAAGACGTTCAGCTCATaGAGGTTGGGGGAGGTGCTCTGGGGGCAGATGTCC +
Preference number: 6 (lower is better)
Translates to: EIWKLKLKTFSS*RLGEVLWGQMS
Trigger: GGACATCTGCCCCCAGAGCACCTCCCCCAACCTGCATGAGCTGAACGTCTTCAACTTCAGCTTCCAAATCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS CAA 90 bp ATGAGCCCCAGGAAGAAGTTCTCAGTGGAGATTTGGAAGCTGAAGTaGAAGACGTTCAGCTCATGCAGGTTGGGGGAGGTGCTCTGGGGG +
Preference number: 6 (lower is better)
Translates to: MSPRKKFSVEIWKLK*KTFSSCRLGEVLWG
Trigger: CCCCCAGAGCACCTCCCCCAACCTGCATGAGCTGAACGTCTTCAACTTCAGCTTCCAAATCTCCACTGAGAACTTCTTCCTGGGGCTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS GCA 72 bp GGTGAGAGCTGCTCAAAGTTGGGTACATCCTTGACTTaGACATGGGGCACTTTCCAGTTGAGAGACAGGCCC +
Preference number: 6 (lower is better)
Translates to: GESCSKLGTSLT*TWGTFQLRDRP
Trigger: GGGCCTGTCTCTCAACTGGAAAGTGCCCCATGTGCAAGTCAAGGATGTACCCAACTTTGAGCAGCTCTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000438734.1
ENST00000593866.5
ENST00000597664.6
CDS TCA 72 bp CGTACATGCTTTCTTCAGTGCAGCCTCCAGCTCTGGTaGGAGCTGCTCAAAGTTGGGTACATCCTTGACTTG +
Preference number: 6 (lower is better)
Translates to: RTCFLQCSLQLW*ELLKVGYILDL
Trigger: CAAGTCAAGGATGTACCCAACTTTGAGCAGCTCTCACCAGAGCTGGAGGCTGCACTGAAGAAAGCATGTACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000438734.1
ENST00000593866.5
ENST00000597664.6
CDS CAA 72 bp AGCTCTGGTGAGAGCTGCTCAAAGTTGGGTACATCCTaGACTTGCACATGGGGCACTTTCCAGTTGAGAGAC +
Preference number: 6 (lower is better)
Translates to: SSGESCSKLGTS*TCTWGTFQLRD
Trigger: GTCTCTCAACTGGAAAGTGCCCCATGTGCAAGTCAAGGATGTACCCAACTTTGAGCAGCTCTCACCAGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000438734.1
ENST00000593866.5
ENST00000597664.6
CDS CAA 90 bp GGGTATGAGACATATGAGCCCCAGGAAGAAGTTCTCAGTGGAGATTaGGAAGCTGAAGTTGAAGACGTTCAGCTCATGCAGGTTGGGGGA +
Preference number: 6 (lower is better)
Translates to: GYETYEPQEEVLSGD*EAEVEDVQLMQVGG
Trigger: TCCCCCAACCTGCATGAGCTGAACGTCTTCAACTTCAGCTTCCAAATCTCCACTGAGAACTTCTTCCTGGGGCTCATATGTCTCATACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS CAA 72 bp AGGAAGAAGTTCTCAGTGGAGATTTGGAAGCTGAAGTaGAAGACGTTCAGCTCATGCAGGTTGGGGGAGGTG +
Preference number: 6 (lower is better)
Translates to: RKKFSVEIWKLK*KTFSSCRLGEV
Trigger: CACCTCCCCCAACCTGCATGAGCTGAACGTCTTCAACTTCAGCTTCCAAATCTCCACTGAGAACTTCTTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS CCA 72 bp CATATGAGCCCCAGGAAGAAGTTCTCAGTGGAGATTTaGAAGCTGAAGTTGAAGACGTTCAGCTCATGCAGG +
Preference number: 6 (lower is better)
Translates to: HMSPRKKFSVEI*KLKLKTFSSCR
Trigger: CCTGCATGAGCTGAACGTCTTCAACTTCAGCTTCCAAATCTCCACTGAGAACTTCTTCCTGGGGCTCATATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6
CDS CAA 72 bp ACATATGAGCCCCAGGAAGAAGTTCTCAGTGGAGATTaGGAAGCTGAAGTTGAAGACGTTCAGCTCATGCAG +
Preference number: 6 (lower is better)
Translates to: TYEPQEEVLSGD*EAEVEDVQLMQ
Trigger: CTGCATGAGCTGAACGTCTTCAACTTCAGCTTCCAAATCTCCACTGAGAACTTCTTCCTGGGGCTCATATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216177.8
ENST00000381198.6
ENST00000593866.5
ENST00000597664.6