RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PNMA5 (Homo sapiens)

Ensembl gene IDs: ENSG00000198883

Ensembl transcript IDs: ENST00000361887.5, ENST00000439251.3, ENST00000452693.5, ENST00000535214.6

Found 346 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp GGCCCCAGGATCCACCTCTTGCCAGGATGGTGGGCTCTGGCAATGTGTACTCGCCAGGGAACCCCCTCCTaGGCCCACCCGCTGGGGCAG +
Preference number: 2 (lower is better)
Translates to: GPRIHLLPGWWALAMCTRQGTPS*AHPLGQ
Trigger: CTGCCCCAGCGGGTGGGCTCAGGAGGGGGTTCCCTG...GCGAGTACACATTGCCAGAGCCCACCATCCTGGCAAGAGGTGGATCCTGGGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
3UTR-3UTR CCA 90 bp GGCCCCAGGATCCACCTCTTGCCAGGATGGTGGGCTCTGGCAATGTGTACTCGCCCTGAGCCCACCCGCTaGGGCAGGGCCCTGCCCTAT +
Preference number: 2 (lower is better)
Translates to: GPRIHLLPGWWALAMCTRPEPTR*GRALPY
Trigger: ATAGGGCAGGGCCCTGCCCCAGCGGGTGGGCTCAGG...GCGAGTACACATTGCCAGAGCCCACCATCCTGGCAAGAGGTGGATCCTGGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
3UTR-3UTR TCA 90 bp CTGGGGAGCCTCAGGCAGCCCTGCTCCTTCCCGTGTCTGGTTGGTCCTCCTGCAGGGCCCGGCCCCCACTaGACCAGATGCTATTTGGTC +
Preference number: 2 (lower is better)
Translates to: LGSLRQPCSFPCLVGPPAGPGPH*TRCYLV
Trigger: GACCAAATAGCATCTGGTTCAGTGGGGGCCGGGCCC...TGCAGGAGGACCAACCAGACACGGGAAGGAGCAGGGCTGCCTGAGGCTCCCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
3UTR-3UTR TCA 90 bp CTGGGGAGCCTCAGGCAGCCCTGCTCCTTCCCGTGTCTGGTTGGTCCTCCTGCAGACACGGAACAGCAGTaGGCAGAGCCCGGGCCTGAT +
Preference number: 2 (lower is better)
Translates to: LGSLRQPCSFPCLVGPPADTEQQ*AEPGPD
Trigger: ATCAGGCCCGGGCTCTGCTCACTGCTGTTCCGTGTC...TGCAGGAGGACCAACCAGACACGGGAAGGAGCAGGGCTGCCTGAGGCTCCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
3UTR-3UTR TCA 90 bp GGGCTCTGGCAATGTGTACTCGCTTCAGGGAACCCCCTCCTGAGCCCACCCGCTGACACGGAACAGCAGTaGGCAGAGCCCGGGCCTGAT +
Preference number: 2 (lower is better)
Translates to: GLWQCVLASGNPLLSPPADTEQQ*AEPGPD
Trigger: ATCAGGCCCGGGCTCTGCTCACTGCTGTTCCGTGTC...AGCGGGTGGGCTCAGGAGGGGGTTCCCTGAAGCGAGTACACATTGCCAGAGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
3UTR-3UTR TCA 90 bp GGCCCCAGGATCCACCTCTTGCCAGGATGGTGGGCTCTGGCAATGTGTACTCGCGACACGGAACAGCAGTaGGCAGAGCCCGGGCCTGAT +
Preference number: 2 (lower is better)
Translates to: GPRIHLLPGWWALAMCTRDTEQQ*AEPGPD
Trigger: ATCAGGCCCGGGCTCTGCTCACTGCTGTTCCGTGTC...GCGAGTACACATTGCCAGAGCCCACCATCCTGGCAAGAGGTGGATCCTGGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
3UTR-3UTR GCA 90 bp CTGGGGAGCCTCAGGCAGCCCTGCTCCTTCCCGTGTCTGGTTGGTCCTCCTGCAGCTTCCCTGTCCCTCTaGCCCAGTCAAGTTCCCTGT +
Preference number: 2 (lower is better)
Translates to: LGSLRQPCSFPCLVGPPAASLSL*PSQVPC
Trigger: ACAGGGAACTTGACTGGGGCAGAGGGACAGGGAAGC...TGCAGGAGGACCAACCAGACACGGGAAGGAGCAGGGCTGCCTGAGGCTCCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
3UTR-3UTR GCA 90 bp GGGCTCTGGCAATGTGTACTCGCTTCAGGGAACCCCCTCCTGAGCCCACCCGCTCACAAGGTGAGCGTCTaGCATGCCTCCTTCCCACCG +
Preference number: 2 (lower is better)
Translates to: GLWQCVLASGNPLLSPPAHKVSV*HASFPP
Trigger: CGGTGGGAAGGAGGCATGGCAGACGCTCACCTTGTG...AGCGGGTGGGCTCAGGAGGGGGTTCCCTGAAGCGAGTACACATTGCCAGAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
3UTR-3UTR TCA 90 bp GGCCCCAGGATCCACCTCTTGCCAGGATGGTGGGCTCTGGCAATGTGTACTCGCTGGTGCAGGGGCTTATaGATGCTGCCTTCCTGGGGC +
Preference number: 2 (lower is better)
Translates to: GPRIHLLPGWWALAMCTRWCRGL*MLPSWG
Trigger: GCCCCAGGAAGGCAGCATTCATAAGCCCCTGCACCA...GCGAGTACACATTGCCAGAGCCCACCATCCTGGCAAGAGGTGGATCCTGGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
3UTR-3UTR GCA 90 bp GGCCCCAGGATCCACCTCTTGCCAGGATGGTGGGCTCTGGCAATGTGTACTCGCGCAGGGGCTTATGAATaGTGCCTTCCTGGGGCTCCC +
Preference number: 2 (lower is better)
Translates to: GPRIHLLPGWWALAMCTRAGAYE*CLPGAP
Trigger: GGGAGCCCCAGGAAGGCAGCATTCATAAGCCCCTGC...GCGAGTACACATTGCCAGAGCCCACCATCCTGGCAAGAGGTGGATCCTGGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
3UTR-3UTR CCA 90 bp GGCCCCAGGATCCACCTCTTGCCAGGATGGTGGGCTCTGGCAATGTGTACTCGCCTTCCCACCGTCTCCTaGAACTGCGCTGGGGTACTC +
Preference number: 2 (lower is better)
Translates to: GPRIHLLPGWWALAMCTRLPTVS*NCAGVL
Trigger: GAGTACCCCAGCGCAGTTCCAGGAGACGGTGGGAAG...GCGAGTACACATTGCCAGAGCCCACCATCCTGGCAAGAGGTGGATCCTGGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
3UTR-3UTR TCA 90 bp GGCCCCAGGATCCACCTCTTGCCAGGATGGTGGGCTCTGGCAATGTGTACTCGCGTCACAGTCACAAGGTaGGCGTCTGCCATGCCTCCT +
Preference number: 2 (lower is better)
Translates to: GPRIHLLPGWWALAMCTRVTVTR*ASAMPP
Trigger: AGGAGGCATGGCAGACGCTCACCTTGTGACTGTGAC...GCGAGTACACATTGCCAGAGCCCACCATCCTGGCAAGAGGTGGATCCTGGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
3UTR-3UTR GCA 90 bp GGCCCCAGGATCCACCTCTTGCCAGGATGGTGGGCTCTGGCAATGTGTACTCGCAATGTCCCTGCTGCCTaGCAGGGGAAGGAGTGCTTC +
Preference number: 2 (lower is better)
Translates to: GPRIHLLPGWWALAMCTRNVPAA*QGKECF
Trigger: GAAGCACTCCTTCCCCTGGCAGGCAGCAGGGACATT...GCGAGTACACATTGCCAGAGCCCACCATCCTGGCAAGAGGTGGATCCTGGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
3UTR-3UTR GCA 90 bp GGCCCCAGGATCCACCTCTTGCCAGGATGGTGGGCTCTGGCAATGTGTACTCGCGCTTCCCTGTCCCTCTaGCCCAGTCAAGTTCCCTGT +
Preference number: 2 (lower is better)
Translates to: GPRIHLLPGWWALAMCTRASLSL*PSQVPC
Trigger: ACAGGGAACTTGACTGGGGCAGAGGGACAGGGAAGC...GCGAGTACACATTGCCAGAGCCCACCATCCTGGCAAGAGGTGGATCCTGGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
3UTR-3UTR CCA 90 bp CTGGGGAGCCTCAGGCAGCCCTGCTCCTTCCCGTGTCTGGTTGGTCCTCCTGCACACAGGGTAGATATTTaGGGGTGTCCAGAGGACCAG +
Preference number: 2 (lower is better)
Translates to: LGSLRQPCSFPCLVGPPAHRVDI*GCPEDQ
Trigger: CTGGTCCTCTGGACACCCCCAAATATCTACCCTGTG...TGCAGGAGGACCAACCAGACACGGGAAGGAGCAGGGCTGCCTGAGGCTCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
3UTR-3UTR TCA 90 bp GGCCCCAGGATCCACCTCTTGCCAGGATGGTGGGCTCTGGCAATGTGTACTCGCGAAAGTAAGGGGGCTTaGTCTCGACCTGGCTTCCCT +
Preference number: 2 (lower is better)
Translates to: GPRIHLLPGWWALAMCTRESKGA*SRPGFP
Trigger: AGGGAAGCCAGGTCGAGATCAAGCCCCCTTACTTTC...GCGAGTACACATTGCCAGAGCCCACCATCCTGGCAAGAGGTGGATCCTGGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
3UTR-3UTR GCA 90 bp GGGCTCTGGCAATGTGTACTCGCTTCAGGGAACCCCCTCCTGAGCCCACCCGCTCCCTGCCCTATAGACTaGACAGGACAGTCACAGGAT +
Preference number: 2 (lower is better)
Translates to: GLWQCVLASGNPLLSPPAPCPID*TGQSQD
Trigger: ATCCTGTGACTGTCCTGTGCAGTCTATAGGGCAGGG...AGCGGGTGGGCTCAGGAGGGGGTTCCCTGAAGCGAGTACACATTGCCAGAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
3UTR-3UTR CCA 90 bp GGGCTCTGGCAATGTGTACTCGCTTCAGGGAACCCCCTCCTGAGCCCACCCGCTGTCCCTTCCAGCTGGTaGAAAGTAAGGGGGCTTGAT +
Preference number: 2 (lower is better)
Translates to: GLWQCVLASGNPLLSPPAVPSSW*KVRGLD
Trigger: ATCAAGCCCCCTTACTTTCCACCAGCTGGAAGGGAC...AGCGGGTGGGCTCAGGAGGGGGTTCCCTGAAGCGAGTACACATTGCCAGAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
3UTR-3UTR CCA 90 bp GGGCTCTGGCAATGTGTACTCGCTTCAGGGAACCCCCTCCTGAGCCCACCCGCTGAAGTCCCTTCCAGCTaGTGGAAAGTAAGGGGGCTT +
Preference number: 2 (lower is better)
Translates to: GLWQCVLASGNPLLSPPAEVPSS*WKVRGL
Trigger: AAGCCCCCTTACTTTCCACCAGCTGGAAGGGACTTC...AGCGGGTGGGCTCAGGAGGGGGTTCCCTGAAGCGAGTACACATTGCCAGAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
3UTR-3UTR CCA 90 bp GGGCTCTGGCAATGTGTACTCGCTTCAGGGAACCCCCTCCTGAGCCCACCCGCTCACAGGGTAGATATTTaGGGGTGTCCAGAGGACCAG +
Preference number: 2 (lower is better)
Translates to: GLWQCVLASGNPLLSPPAHRVDI*GCPEDQ
Trigger: CTGGTCCTCTGGACACCCCCAAATATCTACCCTGTG...AGCGGGTGGGCTCAGGAGGGGGTTCCCTGAAGCGAGTACACATTGCCAGAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
3UTR-3UTR CCA 90 bp GGGCTCTGGCAATGTGTACTCGCTTCAGGGAACCCCCTCCTGAGCCCACCCGCTTGCGCTGGGGTACTCTaGAAAGGAGCTGCTCAGATA +
Preference number: 2 (lower is better)
Translates to: GLWQCVLASGNPLLSPPACAGVL*KGAAQI
Trigger: TATCTGAGCAGCTCCTTTCCAGAGTACCCCAGCGCA...AGCGGGTGGGCTCAGGAGGGGGTTCCCTGAAGCGAGTACACATTGCCAGAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
3UTR-3UTR GCA 90 bp CTGTTAGGGGCTATGGGCCCGGCCCCCACTGAACCAGATGCTATTTGGTCTTGGAATGTCCCTGCTGCCTaGCAGGGGAAGGAGTGCTTC +
Preference number: 2 (lower is better)
Translates to: LLGAMGPAPTEPDAIWSWNVPAA*QGKECF
Trigger: GAAGCACTCCTTCCCCTGGCAGGCAGCAGGGACATT...CCAAGACCAAATAGCATCTGGTTCAGTGGGGGCCGGGCCCATAGCCCCTAACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
3UTR-3UTR GCA 90 bp CTGTTAGGGGCTATGGGCCCGGCCCCCACTGAACCAGATGCTATTTGGTCTTGGGCTTCCCTGTCCCTCTaGCCCAGTCAAGTTCCCTGT +
Preference number: 2 (lower is better)
Translates to: LLGAMGPAPTEPDAIWSWASLSL*PSQVPC
Trigger: ACAGGGAACTTGACTGGGGCAGAGGGACAGGGAAGC...CCAAGACCAAATAGCATCTGGTTCAGTGGGGGCCGGGCCCATAGCCCCTAACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
3UTR-3UTR CCA 90 bp GGCCCCAGGATCCACCTCTTGCCAGGATGGTGGGCTCTGGCAATGTGTACTCGCGTCCCTTCCAGCTGGTaGAAAGTAAGGGGGCTTGAT +
Preference number: 2 (lower is better)
Translates to: GPRIHLLPGWWALAMCTRVPSSW*KVRGLD
Trigger: ATCAAGCCCCCTTACTTTCCACCAGCTGGAAGGGAC...GCGAGTACACATTGCCAGAGCCCACCATCCTGGCAAGAGGTGGATCCTGGGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
3UTR-3UTR TCA 90 bp CTGTTAGGGGCTATGGGCCCGGCCCCCACTGAACCAGATGCTATTTGGTCTTGGGAAAGTAAGGGGGCTTaGTCTCGACCTGGCTTCCCT +
Preference number: 2 (lower is better)
Translates to: LLGAMGPAPTEPDAIWSWESKGA*SRPGFP
Trigger: AGGGAAGCCAGGTCGAGATCAAGCCCCCTTACTTTC...CCAAGACCAAATAGCATCTGGTTCAGTGGGGGCCGGGCCCATAGCCCCTAACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
3UTR-3UTR GCA 90 bp CTGTTAGGGGCTATGGGCCCGGCCCCCACTGAACCAGATGCTATTTGGTCTTGGTTCAAATGTCCCTGCTaGCTGCCAGGGGAAGGAGTG +
Preference number: 2 (lower is better)
Translates to: LLGAMGPAPTEPDAIWSWFKCPC*LPGEGV
Trigger: CACTCCTTCCCCTGGCAGGCAGCAGGGACATTTGAA...CCAAGACCAAATAGCATCTGGTTCAGTGGGGGCCGGGCCCATAGCCCCTAACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
3UTR-3UTR GCA 90 bp GGCCCCAGGATCCACCTCTTGCCAGGATGGTGGGCTCTGGCAATGTGTACTCGCCCTGTTAGTGTAAGCTaGCCCTTCCCCTTGTTCAAA +
Preference number: 2 (lower is better)
Translates to: GPRIHLLPGWWALAMCTRPVSVS*PFPLFK
Trigger: TTTGAACAAGGGGAAGGGGCAGCTTACACTAACAGG...GCGAGTACACATTGCCAGAGCCCACCATCCTGGCAAGAGGTGGATCCTGGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
3UTR-3UTR CCA 90 bp CTGTTAGGGGCTATGGGCCCGGCCCCCACTGAACCAGATGCTATTTGGTCTTGGGAAGTCCCTTCCAGCTaGTGGAAAGTAAGGGGGCTT +
Preference number: 2 (lower is better)
Translates to: LLGAMGPAPTEPDAIWSWEVPSS*WKVRGL
Trigger: AAGCCCCCTTACTTTCCACCAGCTGGAAGGGACTTC...CCAAGACCAAATAGCATCTGGTTCAGTGGGGGCCGGGCCCATAGCCCCTAACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
3UTR-3UTR CCA 90 bp GGGCTCTGGCAATGTGTACTCGCTTCAGGGAACCCCCTCCTGAGCCCACCCGCTGAACCAGATGCTATTTaGTCTTGGTTGGTGAAGTCC +
Preference number: 2 (lower is better)
Translates to: GLWQCVLASGNPLLSPPAEPDAI*SWLVKS
Trigger: GGACTTCACCAACCAAGACCAAATAGCATCTGGTTC...AGCGGGTGGGCTCAGGAGGGGGTTCCCTGAAGCGAGTACACATTGCCAGAGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
3UTR-3UTR GCA 90 bp GTGCTAAGTGTAGTGGTTCCCCGCTTGTGTCTCCTGTACCTGTTAGGGGCTATGAATGTCCCTGCTGCCTaGCAGGGGAAGGAGTGCTTC +
Preference number: 2 (lower is better)
Translates to: VLSVVVPRLCLLYLLGAMNVPAA*QGKECF
Trigger: GAAGCACTCCTTCCCCTGGCAGGCAGCAGGGACATT...CATAGCCCCTAACAGGTACAGGAGACACAAGCGGGGAACCACTACACTTAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
3UTR-3UTR TCA 90 bp GTGCTAAGTGTAGTGGTTCCCCGCTTGTGTCTCCTGTACCTGTTAGGGGCTATGGAAAGTAAGGGGGCTTaGTCTCGACCTGGCTTCCCT +
Preference number: 2 (lower is better)
Translates to: VLSVVVPRLCLLYLLGAMESKGA*SRPGFP
Trigger: AGGGAAGCCAGGTCGAGATCAAGCCCCCTTACTTTC...CATAGCCCCTAACAGGTACAGGAGACACAAGCGGGGAACCACTACACTTAGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
3UTR-3UTR GCA 90 bp GTGCTAAGTGTAGTGGTTCCCCGCTTGTGTCTCCTGTACCTGTTAGGGGCTATGTTCAAATGTCCCTGCTaGCTGCCAGGGGAAGGAGTG +
Preference number: 2 (lower is better)
Translates to: VLSVVVPRLCLLYLLGAMFKCPC*LPGEGV
Trigger: CACTCCTTCCCCTGGCAGGCAGCAGGGACATTTGAA...CATAGCCCCTAACAGGTACAGGAGACACAAGCGGGGAACCACTACACTTAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
3UTR-3UTR GCA 90 bp CTGTTAGGGGCTATGGGCCCGGCCCCCACTGAACCAGATGCTATTTGGTCTTGGCCTGTTAGTGTAAGCTaGCCCTTCCCCTTGTTCAAA +
Preference number: 2 (lower is better)
Translates to: LLGAMGPAPTEPDAIWSWPVSVS*PFPLFK
Trigger: TTTGAACAAGGGGAAGGGGCAGCTTACACTAACAGG...CCAAGACCAAATAGCATCTGGTTCAGTGGGGGCCGGGCCCATAGCCCCTAACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
3UTR-3UTR GCA 90 bp GGCCCCAGGATCCACCTCTTGCCAGGATGGTGGGCTCTGGCAATGTGTACTCGCACTCTGGAAAGGAGCTaGTCAGATAAAAACACACAC +
Preference number: 2 (lower is better)
Translates to: GPRIHLLPGWWALAMCTRTLERS*SDKNTH
Trigger: GTGTGTGTTTTTATCTGAGCAGCTCCTTTCCAGAGT...GCGAGTACACATTGCCAGAGCCCACCATCCTGGCAAGAGGTGGATCCTGGGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
3UTR-3UTR CCA 90 bp GTGCTAAGTGTAGTGGTTCCCCGCTTGTGTCTCCTGTACCTGTTAGGGGCTATGGTCCCTTCCAGCTGGTaGAAAGTAAGGGGGCTTGAT +
Preference number: 2 (lower is better)
Translates to: VLSVVVPRLCLLYLLGAMVPSSW*KVRGLD
Trigger: ATCAAGCCCCCTTACTTTCCACCAGCTGGAAGGGAC...CATAGCCCCTAACAGGTACAGGAGACACAAGCGGGGAACCACTACACTTAGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
3UTR-3UTR GCA 90 bp GTGCTAAGTGTAGTGGTTCCCCGCTTGTGTCTCCTGTACCTGTTAGGGGCTATGCCTGTTAGTGTAAGCTaGCCCTTCCCCTTGTTCAAA +
Preference number: 2 (lower is better)
Translates to: VLSVVVPRLCLLYLLGAMPVSVS*PFPLFK
Trigger: TTTGAACAAGGGGAAGGGGCAGCTTACACTAACAGG...CATAGCCCCTAACAGGTACAGGAGACACAAGCGGGGAACCACTACACTTAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
3UTR-3UTR CCA 90 bp GTGCTAAGTGTAGTGGTTCCCCGCTTGTGTCTCCTGTACCTGTTAGGGGCTATGGAACCAGATGCTATTTaGTCTTGGTTGGTGAAGTCC +
Preference number: 2 (lower is better)
Translates to: VLSVVVPRLCLLYLLGAMEPDAI*SWLVKS
Trigger: GGACTTCACCAACCAAGACCAAATAGCATCTGGTTC...CATAGCCCCTAACAGGTACAGGAGACACAAGCGGGGAACCACTACACTTAGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
3UTR-3UTR CAA 90 bp CTGGGGAGCCTCAGGCAGCCCTGCTCCTTCCCGTGTCTGGTTGGTCCTCCTGCACCACAGGGTAGATATTaGGGGGTGTCCAGAGGACCA +
Preference number: 3 (lower is better)
Translates to: LGSLRQPCSFPCLVGPPAPQGRY*GVSRGP
Trigger: TGGTCCTCTGGACACCCCCAAATATCTACCCTGTGG...TGCAGGAGGACCAACCAGACACGGGAAGGAGCAGGGCTGCCTGAGGCTCCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
3UTR GCA 72 bp GCAGCCCTGCTCCTTCCCGTGTCTGGTTGGTCCTCCTaGAGTCGAGGTCACAGTCACAAGGTGAGCGTCTGC +
Preference number: 3 (lower is better)
Translates to: AALLLPVSGWSS*SRGHSHKVSVC
Trigger: GCAGACGCTCACCTTGTGACTGTGACCTCGACTGCAGGAGGACCAACCAGACACGGGAAGGAGCAGGGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
3UTR CCA 72 bp GCCCCAGGATCCACCTCTTGCCAGGATGGTGGGCTCTaGCAATGTGTACTCGCTTCAGGGAACCCCCTCCTG +
Preference number: 3 (lower is better)
Translates to: APGSTSCQDGGL*QCVLASGNPLL
Trigger: CAGGAGGGGGTTCCCTGAAGCGAGTACACATTGCCAGAGCCCACCATCCTGGCAAGAGGTGGATCCTGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
3UTR-3UTR CAA 90 bp GGGCTCTGGCAATGTGTACTCGCTTCAGGGAACCCCCTCCTGAGCCCACCCGCTGTAGTGGTTCCCCGCTaGTGTCTCCTGTACCTGTTA +
Preference number: 3 (lower is better)
Translates to: GLWQCVLASGNPLLSPPAVVVPR*CLLYLL
Trigger: TAACAGGTACAGGAGACACAAGCGGGGAACCACTAC...AGCGGGTGGGCTCAGGAGGGGGTTCCCTGAAGCGAGTACACATTGCCAGAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
3UTR-3UTR CAA 90 bp CTGGGGAGCCTCAGGCAGCCCTGCTCCTTCCCGTGTCTGGTTGGTCCTCCTGCAAGATGCTATTTGGTCTaGGTTGGTGAAGTCCCTTCC +
Preference number: 3 (lower is better)
Translates to: LGSLRQPCSFPCLVGPPARCYLV*VGEVPS
Trigger: GGAAGGGACTTCACCAACCAAGACCAAATAGCATCT...TGCAGGAGGACCAACCAGACACGGGAAGGAGCAGGGCTGCCTGAGGCTCCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
3UTR-3UTR CAA 90 bp GGCCCCAGGATCCACCTCTTGCCAGGATGGTGGGCTCTGGCAATGTGTACTCGCGTAGTGGTTCCCCGCTaGTGTCTCCTGTACCTGTTA +
Preference number: 3 (lower is better)
Translates to: GPRIHLLPGWWALAMCTRVVVPR*CLLYLL
Trigger: TAACAGGTACAGGAGACACAAGCGGGGAACCACTAC...GCGAGTACACATTGCCAGAGCCCACCATCCTGGCAAGAGGTGGATCCTGGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
3UTR-3UTR CAA 90 bp GGGCTCTGGCAATGTGTACTCGCTTCAGGGAACCCCCTCCTGAGCCCACCCGCTAGATGCTATTTGGTCTaGGTTGGTGAAGTCCCTTCC +
Preference number: 3 (lower is better)
Translates to: GLWQCVLASGNPLLSPPARCYLV*VGEVPS
Trigger: GGAAGGGACTTCACCAACCAAGACCAAATAGCATCT...AGCGGGTGGGCTCAGGAGGGGGTTCCCTGAAGCGAGTACACATTGCCAGAGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
3UTR-3UTR CAA 90 bp GGCCCCAGGATCCACCTCTTGCCAGGATGGTGGGCTCTGGCAATGTGTACTCGCAGATGCTATTTGGTCTaGGTTGGTGAAGTCCCTTCC +
Preference number: 3 (lower is better)
Translates to: GPRIHLLPGWWALAMCTRRCYLV*VGEVPS
Trigger: GGAAGGGACTTCACCAACCAAGACCAAATAGCATCT...GCGAGTACACATTGCCAGAGCCCACCATCCTGGCAAGAGGTGGATCCTGGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
3UTR GCA 72 bp CCCTCTGCCCCAGTCAAGTTCCCTGTTAGTGTAAGCTaGCCCTTCCCCTTGTTCAAATGTCCCTGCTGCCTG +
Preference number: 3 (lower is better)
Translates to: PSAPVKFPVSVS*PFPLFKCPCCL
Trigger: CAGGCAGCAGGGACATTTGAACAAGGGGAAGGGGCAGCTTACACTAACAGGGAACTTGACTGGGGCAGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR TCA 90 bp GGGCTCTGGCAATGTGTACTCGCTTCAGGGAACCCCCTCCTGAGCCCACCCGCTCAGGGAACCCCCTCCTaGGCCCACCCGCTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: GLWQCVLASGNPLLSPPAQGTPS*AHPLGQ
Trigger: CTGCCCCAGCGGGTGGGCTCAGGAGGGGGTTCCCTG...AGCGGGTGGGCTCAGGAGGGGGTTCCCTGAAGCGAGTACACATTGCCAGAGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR TCA 90 bp CTGGGGAGCCTCAGGCAGCCCTGCTCCTTCCCGTGTCTGGTTGGTCCTCCTGCAGCCTGCACGGTGGCCTaGGGTGCAGAGACACTGGCT +
Preference number: 4 (lower is better)
Translates to: LGSLRQPCSFPCLVGPPAACTVA*GAETLA
Trigger: AGCCAGTGTCTCTGCACCTCAGGCCACCGTGCAGGC...TGCAGGAGGACCAACCAGACACGGGAAGGAGCAGGGCTGCCTGAGGCTCCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR CCA 90 bp CTGGGGAGCCTCAGGCAGCCCTGCTCCTTCCCGTGTCTGGTTGGTCCTCCTGCAGCTTGGGATGGCTCATaGCCCCAGCCCCTGCCTCGT +
Preference number: 4 (lower is better)
Translates to: LGSLRQPCSFPCLVGPPAAWDGS*PQPLPR
Trigger: ACGAGGCAGGGGCTGGGGCCATGAGCCATCCCAAGC...TGCAGGAGGACCAACCAGACACGGGAAGGAGCAGGGCTGCCTGAGGCTCCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR TCA 90 bp GGGCTCTGGCAATGTGTACTCGCTTCAGGGAACCCCCTCCTGAGCCCACCCGCTGCCTGCACGGTGGCCTaGGGTGCAGAGACACTGGCT +
Preference number: 4 (lower is better)
Translates to: GLWQCVLASGNPLLSPPAACTVA*GAETLA
Trigger: AGCCAGTGTCTCTGCACCTCAGGCCACCGTGCAGGC...AGCGGGTGGGCTCAGGAGGGGGTTCCCTGAAGCGAGTACACATTGCCAGAGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR GCA 90 bp CTGGGGAGCCTCAGGCAGCCCTGCTCCTTCCCGTGTCTGGTTGGTCCTCCTGCATCTCGGCAGGGAGGCTaGAACATCCCAGGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: LGSLRQPCSFPCLVGPPASRQGG*NIPGLW
Trigger: CCAGAGCCCTGGGATGTTGCAGCCTCCCTGCCGAGA...TGCAGGAGGACCAACCAGACACGGGAAGGAGCAGGGCTGCCTGAGGCTCCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR GCA 90 bp GGGCTCTGGCAATGTGTACTCGCTTCAGGGAACCCCCTCCTGAGCCCACCCGCTCACGTCTATGGCGGCTaGCGCCTCCGTGCTGACTGC +
Preference number: 4 (lower is better)
Translates to: GLWQCVLASGNPLLSPPAHVYGG*RLRADC
Trigger: GCAGTCAGCACGGAGGCGGCAGCCGCCATAGACGTG...AGCGGGTGGGCTCAGGAGGGGGTTCCCTGAAGCGAGTACACATTGCCAGAGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535214.6
CDS-3UTR GCA 90 bp CTGGGGAGCCTCAGGCAGCCCTGCTCCTTCCCGTGTCTGGTTGGTCCTCCTGCATGGATCTGCCGGAGGTaGCTCCAAGCCGGAGTTCCC +
Preference number: 4 (lower is better)
Translates to: LGSLRQPCSFPCLVGPPAWICRR*LQAGVP
Trigger: GGGAACTCCGGCTTGGAGGCACCTCCGGCAGATCCA...TGCAGGAGGACCAACCAGACACGGGAAGGAGCAGGGCTGCCTGAGGCTCCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535214.6
CDS-3UTR CCA 90 bp CTGGGGAGCCTCAGGCAGCCCTGCTCCTTCCCGTGTCTGGTTGGTCCTCCTGCACTGGGTTGGCCCTGCTaGCAGCGCGGATGCTGCAAT +
Preference number: 4 (lower is better)
Translates to: LGSLRQPCSFPCLVGPPALGWPC*QRGCCN
Trigger: ATTGCAGCATCCGCGCTGCCAGCAGGGCCAACCCAG...TGCAGGAGGACCAACCAGACACGGGAAGGAGCAGGGCTGCCTGAGGCTCCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535214.6
CDS-3UTR CCA 90 bp GGCCCCAGGATCCACCTCTTGCCAGGATGGTGGGCTCTGGCAATGTGTACTCGCGGTGCCTTGCTGGGTTaGCCCTGCTGGCAGCGCGGA +
Preference number: 4 (lower is better)
Translates to: GPRIHLLPGWWALAMCTRGALLG*PCWQRG
Trigger: TCCGCGCTGCCAGCAGGGCCAACCCAGCAAGGCACC...GCGAGTACACATTGCCAGAGCCCACCATCCTGGCAAGAGGTGGATCCTGGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535214.6
CDS-3UTR TCA 90 bp CTGGGGAGCCTCAGGCAGCCCTGCTCCTTCCCGTGTCTGGTTGGTCCTCCTGCAGTCTGTGCTGCGCACTaGCAAGGGGCTCTTGTGCAC +
Preference number: 4 (lower is better)
Translates to: LGSLRQPCSFPCLVGPPAVCAAH*QGALVH
Trigger: GTGCACAAGAGCCCCTTGTCAGTGCGCAGCACAGAC...TGCAGGAGGACCAACCAGACACGGGAAGGAGCAGGGCTGCCTGAGGCTCCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR TCA 90 bp GGGCTCTGGCAATGTGTACTCGCTTCAGGGAACCCCCTCCTGAGCCCACCCGCTGGGCCCGGCCCCCACTaGACCAGATGCTATTTGGTC +
Preference number: 4 (lower is better)
Translates to: GLWQCVLASGNPLLSPPAGPGPH*TRCYLV
Trigger: GACCAAATAGCATCTGGTTCAGTGGGGGCCGGGCCC...AGCGGGTGGGCTCAGGAGGGGGTTCCCTGAAGCGAGTACACATTGCCAGAGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR GCA 90 bp GGGCTCTGGCAATGTGTACTCGCTTCAGGGAACCCCCTCCTGAGCCCACCCGCTTCCCAACTCCTCTCCTaGAGCCTGTGGCCCCTCCCT +
Preference number: 4 (lower is better)
Translates to: GLWQCVLASGNPLLSPPASQLLS*SLWPLP
Trigger: AGGGAGGGGCCACAGGCTGCAGGAGAGGAGTTGGGA...AGCGGGTGGGCTCAGGAGGGGGTTCCCTGAAGCGAGTACACATTGCCAGAGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR GCA 90 bp CTGGGGAGCCTCAGGCAGCCCTGCTCCTTCCCGTGTCTGGTTGGTCCTCCTGCACACAAGGTGAGCGTCTaGCATGCCTCCTTCCCACCG +
Preference number: 4 (lower is better)
Translates to: LGSLRQPCSFPCLVGPPAHKVSV*HASFPP
Trigger: CGGTGGGAAGGAGGCATGGCAGACGCTCACCTTGTG...TGCAGGAGGACCAACCAGACACGGGAAGGAGCAGGGCTGCCTGAGGCTCCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR GCA 90 bp CTGGGGAGCCTCAGGCAGCCCTGCTCCTTCCCGTGTCTGGTTGGTCCTCCTGCAAGCCTCAGGCAGCCCTaGTCCTTCCCGTGTCTGGTT +
Preference number: 4 (lower is better)
Translates to: LGSLRQPCSFPCLVGPPASLRQP*SFPCLV
Trigger: AACCAGACACGGGAAGGAGCAGGGCTGCCTGAGGCT...TGCAGGAGGACCAACCAGACACGGGAAGGAGCAGGGCTGCCTGAGGCTCCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR GCA 90 bp CTGGGGAGCCTCAGGCAGCCCTGCTCCTTCCCGTGTCTGGTTGGTCCTCCTGCACCAGGATCCACCTCTTaGCAGGATGGTGGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: LGSLRQPCSFPCLVGPPAPGSTS*QDGGLW
Trigger: CCAGAGCCCACCATCCTGGCAAGAGGTGGATCCTGG...TGCAGGAGGACCAACCAGACACGGGAAGGAGCAGGGCTGCCTGAGGCTCCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR GCA 90 bp CTGGGGAGCCTCAGGCAGCCCTGCTCCTTCCCGTGTCTGGTTGGTCCTCCTGCAGGACTCTGCTGTGTGTaGTTCGGGTGCCTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: LGSLRQPCSFPCLVGPPAGLCCV*FGCLAG
Trigger: CCCAGCAAGGCACCCGAAGCACACACAGCAGAGTCC...TGCAGGAGGACCAACCAGACACGGGAAGGAGCAGGGCTGCCTGAGGCTCCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535214.6
CDS-3UTR CCA 90 bp CTGGGGAGCCTCAGGCAGCCCTGCTCCTTCCCGTGTCTGGTTGGTCCTCCTGCATCACTCGGGGCTATGTaGGCTCAGGTCACCCAGCAC +
Preference number: 4 (lower is better)
Translates to: LGSLRQPCSFPCLVGPPASLGAM*AQVTQH
Trigger: GTGCTGGGTGACCTGAGCCCACATAGCCCCGAGTGA...TGCAGGAGGACCAACCAGACACGGGAAGGAGCAGGGCTGCCTGAGGCTCCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361887.5
ENST00000439251.3
CDS-3UTR CCA 90 bp CTGGGGAGCCTCAGGCAGCCCTGCTCCTTCCCGTGTCTGGTTGGTCCTCCTGCAACCTTGCCTGCACGGTaGCCTGAGGTGCAGAGACAC +
Preference number: 4 (lower is better)
Translates to: LGSLRQPCSFPCLVGPPATLPAR*PEVQRH
Trigger: GTGTCTCTGCACCTCAGGCCACCGTGCAGGCAAGGT...TGCAGGAGGACCAACCAGACACGGGAAGGAGCAGGGCTGCCTGAGGCTCCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR CCA 90 bp GGCCCCAGGATCCACCTCTTGCCAGGATGGTGGGCTCTGGCAATGTGTACTCGCGCTTGGGATGGCTCATaGCCCCAGCCCCTGCCTCGT +
Preference number: 4 (lower is better)
Translates to: GPRIHLLPGWWALAMCTRAWDGS*PQPLPR
Trigger: ACGAGGCAGGGGCTGGGGCCATGAGCCATCCCAAGC...GCGAGTACACATTGCCAGAGCCCACCATCCTGGCAAGAGGTGGATCCTGGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR CCA 90 bp GGGCTCTGGCAATGTGTACTCGCTTCAGGGAACCCCCTCCTGAGCCCACCCGCTGTGCTCGGGGCTATGTaGGCTCAGGTCACCCAGCAC +
Preference number: 4 (lower is better)
Translates to: GLWQCVLASGNPLLSPPAVLGAM*AQVTQH
Trigger: GTGCTGGGTGACCTGAGCCCACATAGCCCCGAGCAC...AGCGGGTGGGCTCAGGAGGGGGTTCCCTGAAGCGAGTACACATTGCCAGAGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452693.5
CDS-3UTR TCA 90 bp GGGCTCTGGCAATGTGTACTCGCTTCAGGGAACCCCCTCCTGAGCCCACCCGCTCCCTCCTTGCTGGAGTaGAGGCTGGCAGCAAGAGAG +
Preference number: 4 (lower is better)
Translates to: GLWQCVLASGNPLLSPPAPSLLE*RLAARE
Trigger: CTCTCTTGCTGCCAGCCTTCACTCCAGCAAGGAGGG...AGCGGGTGGGCTCAGGAGGGGGTTCCCTGAAGCGAGTACACATTGCCAGAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
CDS-3UTR TCA 90 bp GGGCTCTGGCAATGTGTACTCGCTTCAGGGAACCCCCTCCTGAGCCCACCCGCTGGAGGACACCCTCGCTaGTCCAAGAGCTCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: GLWQCVLASGNPLLSPPAGGHPR*SKSSSL
Trigger: CAAGCTGGAGCTCTTGGATCAGCGAGGGTGTCCTCC...AGCGGGTGGGCTCAGGAGGGGGTTCCCTGAAGCGAGTACACATTGCCAGAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR TCA 90 bp GGGCTCTGGCAATGTGTACTCGCTTCAGGGAACCCCCTCCTGAGCCCACCCGCTTGGTGCAGGGGCTTATaGATGCTGCCTTCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: GLWQCVLASGNPLLSPPAWCRGL*MLPSWG
Trigger: GCCCCAGGAAGGCAGCATTCATAAGCCCCTGCACCA...AGCGGGTGGGCTCAGGAGGGGGTTCCCTGAAGCGAGTACACATTGCCAGAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR TCA 90 bp CTGGGGAGCCTCAGGCAGCCCTGCTCCTTCCCGTGTCTGGTTGGTCCTCCTGCAGTCACAGTCACAAGGTaGGCGTCTGCCATGCCTCCT +
Preference number: 4 (lower is better)
Translates to: LGSLRQPCSFPCLVGPPAVTVTR*ASAMPP
Trigger: AGGAGGCATGGCAGACGCTCACCTTGTGACTGTGAC...TGCAGGAGGACCAACCAGACACGGGAAGGAGCAGGGCTGCCTGAGGCTCCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR TCA 90 bp GGGCTCTGGCAATGTGTACTCGCTTCAGGGAACCCCCTCCTGAGCCCACCCGCTACAGCCACTCCCTGCTaGCTTCCTCCTGCTGTGGGT +
Preference number: 4 (lower is better)
Translates to: GLWQCVLASGNPLLSPPATATPC*LPPAVG
Trigger: ACCCACAGCAGGAGGAAGTCAGCAGGGAGTGGCTGT...AGCGGGTGGGCTCAGGAGGGGGTTCCCTGAAGCGAGTACACATTGCCAGAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR TCA 90 bp CTGGGGAGCCTCAGGCAGCCCTGCTCCTTCCCGTGTCTGGTTGGTCCTCCTGCATTCCTGACTCAGGCGTaGTGGGTCCTGCTTCACTGG +
Preference number: 4 (lower is better)
Translates to: LGSLRQPCSFPCLVGPPAFLTQA*WVLLHW
Trigger: CCAGTGAAGCAGGACCCATCACGCCTGAGTCAGGAA...TGCAGGAGGACCAACCAGACACGGGAAGGAGCAGGGCTGCCTGAGGCTCCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535214.6
CDS-3UTR GCA 90 bp GGCCCCAGGATCCACCTCTTGCCAGGATGGTGGGCTCTGGCAATGTGTACTCGCTCTCGGCAGGGAGGCTaGAACATCCCAGGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: GPRIHLLPGWWALAMCTRSRQGG*NIPGLW
Trigger: CCAGAGCCCTGGGATGTTGCAGCCTCCCTGCCGAGA...GCGAGTACACATTGCCAGAGCCCACCATCCTGGCAAGAGGTGGATCCTGGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR GCA 90 bp GGGCTCTGGCAATGTGTACTCGCTTCAGGGAACCCCCTCCTGAGCCCACCCGCTACTGGCTTCTGCTCTTaGCTGTCTACCGGAGGCCCC +
Preference number: 4 (lower is better)
Translates to: GLWQCVLASGNPLLSPPATGFCS*LSTGGP
Trigger: GGGGCCTCCGGTAGACAGGCAAGAGCAGAAGCCAGT...AGCGGGTGGGCTCAGGAGGGGGTTCCCTGAAGCGAGTACACATTGCCAGAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR GCA 90 bp CTGGGGAGCCTCAGGCAGCCCTGCTCCTTCCCGTGTCTGGTTGGTCCTCCTGCAGTCGCTAAAAGACCTTaGCTGCACGGTGGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: LGSLRQPCSFPCLVGPPAVAKRP*LHGGLR
Trigger: CCTCAGGCCACCGTGCAGGCAAGGTCTTTTAGCGAC...TGCAGGAGGACCAACCAGACACGGGAAGGAGCAGGGCTGCCTGAGGCTCCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR GCA 90 bp CTGGGGAGCCTCAGGCAGCCCTGCTCCTTCCCGTGTCTGGTTGGTCCTCCTGCAAATGTCCCTGCTGCCTaGCAGGGGAAGGAGTGCTTC +
Preference number: 4 (lower is better)
Translates to: LGSLRQPCSFPCLVGPPANVPAA*QGKECF
Trigger: GAAGCACTCCTTCCCCTGGCAGGCAGCAGGGACATT...TGCAGGAGGACCAACCAGACACGGGAAGGAGCAGGGCTGCCTGAGGCTCCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR GCA 90 bp GGGCTCTGGCAATGTGTACTCGCTTCAGGGAACCCCCTCCTGAGCCCACCCGCTGCAGGGGCTTATGAATaGTGCCTTCCTGGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: GLWQCVLASGNPLLSPPAAGAYE*CLPGAP
Trigger: GGGAGCCCCAGGAAGGCAGCATTCATAAGCCCCTGC...AGCGGGTGGGCTCAGGAGGGGGTTCCCTGAAGCGAGTACACATTGCCAGAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR GCA 90 bp GGGCTCTGGCAATGTGTACTCGCTTCAGGGAACCCCCTCCTGAGCCCACCCGCTAGCCTCAGGCAGCCCTaGTCCTTCCCGTGTCTGGTT +
Preference number: 4 (lower is better)
Translates to: GLWQCVLASGNPLLSPPASLRQP*SFPCLV
Trigger: AACCAGACACGGGAAGGAGCAGGGCTGCCTGAGGCT...AGCGGGTGGGCTCAGGAGGGGGTTCCCTGAAGCGAGTACACATTGCCAGAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR GCA 90 bp GGGCTCTGGCAATGTGTACTCGCTTCAGGGAACCCCCTCCTGAGCCCACCCGCTCCAGGATCCACCTCTTaGCAGGATGGTGGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: GLWQCVLASGNPLLSPPAPGSTS*QDGGLW
Trigger: CCAGAGCCCACCATCCTGGCAAGAGGTGGATCCTGG...AGCGGGTGGGCTCAGGAGGGGGTTCCCTGAAGCGAGTACACATTGCCAGAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR GCA 90 bp GGGCTCTGGCAATGTGTACTCGCTTCAGGGAACCCCCTCCTGAGCCCACCCGCTGGACTCTGCTGTGTGTaGTTCGGGTGCTCGGGGCTA +
Preference number: 4 (lower is better)
Translates to: GLWQCVLASGNPLLSPPAGLCCV*FGCSGL
Trigger: TAGCCCCGAGCACCCGAAGCACACACAGCAGAGTCC...AGCGGGTGGGCTCAGGAGGGGGTTCCCTGAAGCGAGTACACATTGCCAGAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452693.5
CDS-3UTR CCA 90 bp GGGCTCTGGCAATGTGTACTCGCTTCAGGGAACCCCCTCCTGAGCCCACCCGCTACCTTGCCTGCACGGTaGCCTGAGGTGCAGAGACAC +
Preference number: 4 (lower is better)
Translates to: GLWQCVLASGNPLLSPPATLPAR*PEVQRH
Trigger: GTGTCTCTGCACCTCAGGCCACCGTGCAGGCAAGGT...AGCGGGTGGGCTCAGGAGGGGGTTCCCTGAAGCGAGTACACATTGCCAGAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR CCA 90 bp CTGGGGAGCCTCAGGCAGCCCTGCTCCTTCCCGTGTCTGGTTGGTCCTCCTGCACAGCCTTGGGATACGTaGCCTGGCCATGGTCTTCTC +
Preference number: 4 (lower is better)
Translates to: LGSLRQPCSFPCLVGPPAQPWDT*PGHGLL
Trigger: GAGAAGACCATGGCCAGGCCACGTATCCCAAGGCTG...TGCAGGAGGACCAACCAGACACGGGAAGGAGCAGGGCTGCCTGAGGCTCCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR CCA 90 bp CTGGGGAGCCTCAGGCAGCCCTGCTCCTTCCCGTGTCTGGTTGGTCCTCCTGCATGGCCCCTCCCTGCCTaGAGTCTGGTTTTCAGCCTT +
Preference number: 4 (lower is better)
Translates to: LGSLRQPCSFPCLVGPPAWPLPA*SLVFSL
Trigger: AAGGCTGAAAACCAGACTCCAGGCAGGGAGGGGCCA...TGCAGGAGGACCAACCAGACACGGGAAGGAGCAGGGCTGCCTGAGGCTCCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR CCA 90 bp GGGCTCTGGCAATGTGTACTCGCTTCAGGGAACCCCCTCCTGAGCCCACCCGCTCTTCCCACCGTCTCCTaGAACTGCGCTGGGGTACTC +
Preference number: 4 (lower is better)
Translates to: GLWQCVLASGNPLLSPPALPTVS*NCAGVL
Trigger: GAGTACCCCAGCGCAGTTCCAGGAGACGGTGGGAAG...AGCGGGTGGGCTCAGGAGGGGGTTCCCTGAAGCGAGTACACATTGCCAGAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR TCA 90 bp GGCCCCAGGATCCACCTCTTGCCAGGATGGTGGGCTCTGGCAATGTGTACTCGCGTCTGTGCTGCGCACTaGCAAGGGGCTCTTGTGCAC +
Preference number: 4 (lower is better)
Translates to: GPRIHLLPGWWALAMCTRVCAAH*QGALVH
Trigger: GTGCACAAGAGCCCCTTGTCAGTGCGCAGCACAGAC...GCGAGTACACATTGCCAGAGCCCACCATCCTGGCAAGAGGTGGATCCTGGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR TCA 90 bp GGGCTCTGGCAATGTGTACTCGCTTCAGGGAACCCCCTCCTGAGCCCACCCGCTCCCCCGGCCTCTCCCTaGTGGCTTCTCCTTATTCTT +
Preference number: 4 (lower is better)
Translates to: GLWQCVLASGNPLLSPPAPPASP*WLLLIL
Trigger: AAGAATAAGGAGAAGCCATCAGGGAGAGGCCGGGGG...AGCGGGTGGGCTCAGGAGGGGGTTCCCTGAAGCGAGTACACATTGCCAGAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR TCA 90 bp GGGCTCTGGCAATGTGTACTCGCTTCAGGGAACCCCCTCCTGAGCCCACCCGCTGTCACAGTCACAAGGTaGGCGTCTGCCATGCCTCCT +
Preference number: 4 (lower is better)
Translates to: GLWQCVLASGNPLLSPPAVTVTR*ASAMPP
Trigger: AGGAGGCATGGCAGACGCTCACCTTGTGACTGTGAC...AGCGGGTGGGCTCAGGAGGGGGTTCCCTGAAGCGAGTACACATTGCCAGAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR TCA 90 bp GGGCTCTGGCAATGTGTACTCGCTTCAGGGAACCCCCTCCTGAGCCCACCCGCTCAGTTAGGCAGTTCCTaGCTCAGGCGTGATGGGTCC +
Preference number: 4 (lower is better)
Translates to: GLWQCVLASGNPLLSPPAQLGSS*LRRDGS
Trigger: GGACCCATCACGCCTGAGTCAGGAACTGCCTAACTG...AGCGGGTGGGCTCAGGAGGGGGTTCCCTGAAGCGAGTACACATTGCCAGAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535214.6
CDS-3UTR GCA 90 bp GGGCTCTGGCAATGTGTACTCGCTTCAGGGAACCCCCTCCTGAGCCCACCCGCTAGGAGACAGCCTCACTaGTCACTCGGGGCTATGTGG +
Preference number: 4 (lower is better)
Translates to: GLWQCVLASGNPLLSPPARRQPH*SLGAMW
Trigger: CCACATAGCCCCGAGTGAGCAGTGAGGCTGTCTCCT...AGCGGGTGGGCTCAGGAGGGGGTTCCCTGAAGCGAGTACACATTGCCAGAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361887.5
ENST00000439251.3
CDS-3UTR GCA 90 bp GGGCTCTGGCAATGTGTACTCGCTTCAGGGAACCCCCTCCTGAGCCCACCCGCTTTGTGCACGGCTTTCTaGAGCAGGGGCTCTAAGCGC +
Preference number: 4 (lower is better)
Translates to: GLWQCVLASGNPLLSPPALCTAF*SRGSKR
Trigger: GCGCTTAGAGCCCCTGCTGCAGAAAGCCGTGCACAA...AGCGGGTGGGCTCAGGAGGGGGTTCCCTGAAGCGAGTACACATTGCCAGAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR GCA 90 bp CTGGGGAGCCTCAGGCAGCCCTGCTCCTTCCCGTGTCTGGTTGGTCCTCCTGCAGACGAATCATGTCTGTaGTGCGCACTGACAAGGGGC +
Preference number: 4 (lower is better)
Translates to: LGSLRQPCSFPCLVGPPADESCL*CALTRG
Trigger: GCCCCTTGTCAGTGCGCAGCACAGACATGATTCGTC...TGCAGGAGGACCAACCAGACACGGGAAGGAGCAGGGCTGCCTGAGGCTCCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR GCA 90 bp GGCCCCAGGATCCACCTCTTGCCAGGATGGTGGGCTCTGGCAATGTGTACTCGCACTGGCTTCTGCTCTTaGCTGTCTACCGGAGGCCCC +
Preference number: 4 (lower is better)
Translates to: GPRIHLLPGWWALAMCTRTGFCS*LSTGGP
Trigger: GGGGCCTCCGGTAGACAGGCAAGAGCAGAAGCCAGT...GCGAGTACACATTGCCAGAGCCCACCATCCTGGCAAGAGGTGGATCCTGGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR GCA 90 bp GGGCTCTGGCAATGTGTACTCGCTTCAGGGAACCCCCTCCTGAGCCCACCCGCTGTCGCTAAAAGACCTTaGCTGCACGGTGGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: GLWQCVLASGNPLLSPPAVAKRP*LHGGLR
Trigger: CCTCAGGCCACCGTGCAGGCAAGGTCTTTTAGCGAC...AGCGGGTGGGCTCAGGAGGGGGTTCCCTGAAGCGAGTACACATTGCCAGAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR GCA 90 bp GGGCTCTGGCAATGTGTACTCGCTTCAGGGAACCCCCTCCTGAGCCCACCCGCTAATGTCCCTGCTGCCTaGCAGGGGAAGGAGTGCTTC +
Preference number: 4 (lower is better)
Translates to: GLWQCVLASGNPLLSPPANVPAA*QGKECF
Trigger: GAAGCACTCCTTCCCCTGGCAGGCAGCAGGGACATT...AGCGGGTGGGCTCAGGAGGGGGTTCCCTGAAGCGAGTACACATTGCCAGAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR GCA 90 bp GGGCTCTGGCAATGTGTACTCGCTTCAGGGAACCCCCTCCTGAGCCCACCCGCTGCTTCCCTGTCCCTCTaGCCCAGTCAAGTTCCCTGT +
Preference number: 4 (lower is better)
Translates to: GLWQCVLASGNPLLSPPAASLSL*PSQVPC
Trigger: ACAGGGAACTTGACTGGGGCAGAGGGACAGGGAAGC...AGCGGGTGGGCTCAGGAGGGGGTTCCCTGAAGCGAGTACACATTGCCAGAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR GCA 90 bp GGCCCCAGGATCCACCTCTTGCCAGGATGGTGGGCTCTGGCAATGTGTACTCGCCCAGGATCCACCTCTTaGCAGGATGGTGGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: GPRIHLLPGWWALAMCTRPGSTS*QDGGLW
Trigger: CCAGAGCCCACCATCCTGGCAAGAGGTGGATCCTGG...GCGAGTACACATTGCCAGAGCCCACCATCCTGGCAAGAGGTGGATCCTGGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR CCA 90 bp CTGGGGAGCCTCAGGCAGCCCTGCTCCTTCCCGTGTCTGGTTGGTCCTCCTGCAGGAGCCACCCTTTCCTaGTATGTGACTGGGCAGAGT +
Preference number: 4 (lower is better)
Translates to: LGSLRQPCSFPCLVGPPAGATLS*YVTGQS
Trigger: ACTCTGCCCAGTCACATACCAGGAAAGGGTGGCTCC...TGCAGGAGGACCAACCAGACACGGGAAGGAGCAGGGCTGCCTGAGGCTCCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR CCA 90 bp GGCCCCAGGATCCACCTCTTGCCAGGATGGTGGGCTCTGGCAATGTGTACTCGCGTAAGCCTCCCTGTATaGTCTGGGGGCTGCTGTCGC +
Preference number: 4 (lower is better)
Translates to: GPRIHLLPGWWALAMCTRVSLPV*SGGCCR
Trigger: GCGACAGCAGCCCCCAGACCATACAGGGAGGCTTAC...GCGAGTACACATTGCCAGAGCCCACCATCCTGGCAAGAGGTGGATCCTGGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR CCA 90 bp CTGGGGAGCCTCAGGCAGCCCTGCTCCTTCCCGTGTCTGGTTGGTCCTCCTGCATACGTGGCCTGGCCATaGTCTTCTCCCCTAGTGCTT +
Preference number: 4 (lower is better)
Translates to: LGSLRQPCSFPCLVGPPAYVAWP*SSPLVL
Trigger: AAGCACTAGGGGAGAAGACCATGGCCAGGCCACGTA...TGCAGGAGGACCAACCAGACACGGGAAGGAGCAGGGCTGCCTGAGGCTCCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR CCA 90 bp GGGCTCTGGCAATGTGTACTCGCTTCAGGGAACCCCCTCCTGAGCCCACCCGCTCAGCCTTGGGATACGTaGCCTGGCCATGGTCTTCTC +
Preference number: 4 (lower is better)
Translates to: GLWQCVLASGNPLLSPPAQPWDT*PGHGLL
Trigger: GAGAAGACCATGGCCAGGCCACGTATCCCAAGGCTG...AGCGGGTGGGCTCAGGAGGGGGTTCCCTGAAGCGAGTACACATTGCCAGAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR CCA 90 bp GGGCTCTGGCAATGTGTACTCGCTTCAGGGAACCCCCTCCTGAGCCCACCCGCTATGTTTCCCAGGGCTTaGGATGGCTCATGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: GLWQCVLASGNPLLSPPAMFPRA*DGSWPQ
Trigger: CTGGGGCCATGAGCCATCCCAAGCCCTGGGAAACAT...AGCGGGTGGGCTCAGGAGGGGGTTCCCTGAAGCGAGTACACATTGCCAGAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR CCA 90 bp CTGGGGAGCCTCAGGCAGCCCTGCTCCTTCCCGTGTCTGGTTGGTCCTCCTGCACACCTCTTGCCAGGATaGTGGGCTCTGGCAATGTGT +
Preference number: 4 (lower is better)
Translates to: LGSLRQPCSFPCLVGPPAHLLPG*WALAMC
Trigger: ACACATTGCCAGAGCCCACCATCCTGGCAAGAGGTG...TGCAGGAGGACCAACCAGACACGGGAAGGAGCAGGGCTGCCTGAGGCTCCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR CCA 90 bp CTGTTAGGGGCTATGGGCCCGGCCCCCACTGAACCAGATGCTATTTGGTCTTGGACCACCACACGTCTATaGCGGCTGCCGCCTCCGTGC +
Preference number: 4 (lower is better)
Translates to: LLGAMGPAPTEPDAIWSWTTTRL*RLPPPC
Trigger: GCACGGAGGCGGCAGCCGCCATAGACGTGTGGTGGT...CCAAGACCAAATAGCATCTGGTTCAGTGGGGGCCGGGCCCATAGCCCCTAACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535214.6
CDS-3UTR CCA 90 bp GGCCCCAGGATCCACCTCTTGCCAGGATGGTGGGCTCTGGCAATGTGTACTCGCTGGGTCCTGCTTCACTaGATCTGCCGGAGGTGCCTC +
Preference number: 4 (lower is better)
Translates to: GPRIHLLPGWWALAMCTRWVLLH*ICRRCL
Trigger: GAGGCACCTCCGGCAGATCCAGTGAAGCAGGACCCA...GCGAGTACACATTGCCAGAGCCCACCATCCTGGCAAGAGGTGGATCCTGGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535214.6
CDS-3UTR TCA 90 bp CTGTTAGGGGCTATGGGCCCGGCCCCCACTGAACCAGATGCTATTTGGTCTTGGGACACCTGGGGACACTaGCGAGCCCTCCAGGCAGAA +
Preference number: 4 (lower is better)
Translates to: LLGAMGPAPTEPDAIWSWDTWGH*RALQAE
Trigger: TTCTGCCTGGAGGGCTCGTCAGTGTCCCCAGGTGTC...CCAAGACCAAATAGCATCTGGTTCAGTGGGGGCCGGGCCCATAGCCCCTAACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361887.5
ENST00000439251.3
CDS-3UTR TCA 90 bp GGGCTCTGGCAATGTGTACTCGCTTCAGGGAACCCCCTCCTGAGCCCACCCGCTGAAAGTAAGGGGGCTTaGTCTCGACCTGGCTTCCCT +
Preference number: 4 (lower is better)
Translates to: GLWQCVLASGNPLLSPPAESKGA*SRPGFP
Trigger: AGGGAAGCCAGGTCGAGATCAAGCCCCCTTACTTTC...AGCGGGTGGGCTCAGGAGGGGGTTCCCTGAAGCGAGTACACATTGCCAGAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR TCA 90 bp CTGTTAGGGGCTATGGGCCCGGCCCCCACTGAACCAGATGCTATTTGGTCTTGGGACACGGAACAGCAGTaGGCAGAGCCCGGGCCTGAT +
Preference number: 4 (lower is better)
Translates to: LLGAMGPAPTEPDAIWSWDTEQQ*AEPGPD
Trigger: ATCAGGCCCGGGCTCTGCTCACTGCTGTTCCGTGTC...CCAAGACCAAATAGCATCTGGTTCAGTGGGGGCCGGGCCCATAGCCCCTAACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR GCA 90 bp GGCCCCAGGATCCACCTCTTGCCAGGATGGTGGGCTCTGGCAATGTGTACTCGCTTGTGCACGGCTTTCTaGAGCAGGGGCTCTAAGCGC +
Preference number: 4 (lower is better)
Translates to: GPRIHLLPGWWALAMCTRLCTAF*SRGSKR
Trigger: GCGCTTAGAGCCCCTGCTGCAGAAAGCCGTGCACAA...GCGAGTACACATTGCCAGAGCCCACCATCCTGGCAAGAGGTGGATCCTGGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR GCA 90 bp CTGGGGAGCCTCAGGCAGCCCTGCTCCTTCCCGTGTCTGGTTGGTCCTCCTGCAAGAGACACTGGCTTCTaGTCTTGCCTGTCTACCGGA +
Preference number: 4 (lower is better)
Translates to: LGSLRQPCSFPCLVGPPARDTGF*SCLSTG
Trigger: TCCGGTAGACAGGCAAGAGCAGAAGCCAGTGTCTCT...TGCAGGAGGACCAACCAGACACGGGAAGGAGCAGGGCTGCCTGAGGCTCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR GCA 90 bp CTGGGGAGCCTCAGGCAGCCCTGCTCCTTCCCGTGTCTGGTTGGTCCTCCTGCATGCCTAACAGCCGCCTaGGTTTCACTAATGGGGGTA +
Preference number: 4 (lower is better)
Translates to: LGSLRQPCSFPCLVGPPACLTAA*VSLMGV
Trigger: TACCCCCATTAGTGAAACGCAGGCGGCTGTTAGGCA...TGCAGGAGGACCAACCAGACACGGGAAGGAGCAGGGCTGCCTGAGGCTCCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR GCA 90 bp CTGTTAGGGGCTATGGGCCCGGCCCCCACTGAACCAGATGCTATTTGGTCTTGGCATGGCCCCAGCCCCTaGCTCGTTTCCCAACTCCTC +
Preference number: 4 (lower is better)
Translates to: LLGAMGPAPTEPDAIWSWHGPSP*LVSQLL
Trigger: GAGGAGTTGGGAAACGAGGCAGGGGCTGGGGCCATG...CCAAGACCAAATAGCATCTGGTTCAGTGGGGGCCGGGCCCATAGCCCCTAACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR GCA 90 bp GGGCTCTGGCAATGTGTACTCGCTTCAGGGAACCCCCTCCTGAGCCCACCCGCTTGCCAGGGGAAGGAGTaGTTCGGTCTTCTGAGCCTA +
Preference number: 4 (lower is better)
Translates to: GLWQCVLASGNPLLSPPACQGKE*FGLLSL
Trigger: TAGGCTCAGAAGACCGAAGCACTCCTTCCCCTGGCA...AGCGGGTGGGCTCAGGAGGGGGTTCCCTGAAGCGAGTACACATTGCCAGAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR GCA 90 bp CTGGGGAGCCTCAGGCAGCCCTGCTCCTTCCCGTGTCTGGTTGGTCCTCCTGCACCCTGCCCTATAGACTaGACAGGACAGTCACAGGAT +
Preference number: 4 (lower is better)
Translates to: LGSLRQPCSFPCLVGPPAPCPID*TGQSQD
Trigger: ATCCTGTGACTGTCCTGTGCAGTCTATAGGGCAGGG...TGCAGGAGGACCAACCAGACACGGGAAGGAGCAGGGCTGCCTGAGGCTCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR GCA 90 bp GGGCTCTGGCAATGTGTACTCGCTTCAGGGAACCCCCTCCTGAGCCCACCCGCTTGCTGGCAGCGCGGATaGTGCAATAACACAGCCACT +
Preference number: 4 (lower is better)
Translates to: GLWQCVLASGNPLLSPPACWQRG*CNNTAT
Trigger: AGTGGCTGTGTTATTGCAGCATCCGCGCTGCCAGCA...AGCGGGTGGGCTCAGGAGGGGGTTCCCTGAAGCGAGTACACATTGCCAGAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535214.6
CDS-3UTR CCA 90 bp GGGCTCTGGCAATGTGTACTCGCTTCAGGGAACCCCCTCCTGAGCCCACCCGCTGGAGCCACCCTTTCCTaGTATGTGACTGGGCAGAGT +
Preference number: 4 (lower is better)
Translates to: GLWQCVLASGNPLLSPPAGATLS*YVTGQS
Trigger: ACTCTGCCCAGTCACATACCAGGAAAGGGTGGCTCC...AGCGGGTGGGCTCAGGAGGGGGTTCCCTGAAGCGAGTACACATTGCCAGAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR CCA 90 bp GGGCTCTGGCAATGTGTACTCGCTTCAGGGAACCCCCTCCTGAGCCCACCCGCTTACGTGGCCTGGCCATaGTCTTCTCCCCTAGTGCTT +
Preference number: 4 (lower is better)
Translates to: GLWQCVLASGNPLLSPPAYVAWP*SSPLVL
Trigger: AAGCACTAGGGGAGAAGACCATGGCCAGGCCACGTA...AGCGGGTGGGCTCAGGAGGGGGTTCCCTGAAGCGAGTACACATTGCCAGAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR CCA 90 bp GGCCCCAGGATCCACCTCTTGCCAGGATGGTGGGCTCTGGCAATGTGTACTCGCCAGCCTTGGGATACGTaGCCTGGCCATGGTCTTCTC +
Preference number: 4 (lower is better)
Translates to: GPRIHLLPGWWALAMCTRQPWDT*PGHGLL
Trigger: GAGAAGACCATGGCCAGGCCACGTATCCCAAGGCTG...GCGAGTACACATTGCCAGAGCCCACCATCCTGGCAAGAGGTGGATCCTGGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR CCA 90 bp GGCCCCAGGATCCACCTCTTGCCAGGATGGTGGGCTCTGGCAATGTGTACTCGCTGGCCCCTCCCTGCCTaGAGTCTGGTTTTCAGCCTT +
Preference number: 4 (lower is better)
Translates to: GPRIHLLPGWWALAMCTRWPLPA*SLVFSL
Trigger: AAGGCTGAAAACCAGACTCCAGGCAGGGAGGGGCCA...GCGAGTACACATTGCCAGAGCCCACCATCCTGGCAAGAGGTGGATCCTGGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR CCA 90 bp GGCCCCAGGATCCACCTCTTGCCAGGATGGTGGGCTCTGGCAATGTGTACTCGCATGTTTCCCAGGGCTTaGGATGGCTCATGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: GPRIHLLPGWWALAMCTRMFPRA*DGSWPQ
Trigger: CTGGGGCCATGAGCCATCCCAAGCCCTGGGAAACAT...GCGAGTACACATTGCCAGAGCCCACCATCCTGGCAAGAGGTGGATCCTGGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR CCA 90 bp CTGGGGAGCCTCAGGCAGCCCTGCTCCTTCCCGTGTCTGGTTGGTCCTCCTGCAGAAGTCCCTTCCAGCTaGTGGAAAGTAAGGGGGCTT +
Preference number: 4 (lower is better)
Translates to: LGSLRQPCSFPCLVGPPAEVPSS*WKVRGL
Trigger: AAGCCCCCTTACTTTCCACCAGCTGGAAGGGACTTC...TGCAGGAGGACCAACCAGACACGGGAAGGAGCAGGGCTGCCTGAGGCTCCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR CCA 90 bp GTGCTAAGTGTAGTGGTTCCCCGCTTGTGTCTCCTGTACCTGTTAGGGGCTATGCCTGAGCCCACCCGCTaGGGCAGGGCCCTGCCCTAT +
Preference number: 4 (lower is better)
Translates to: VLSVVVPRLCLLYLLGAMPEPTR*GRALPY
Trigger: ATAGGGCAGGGCCCTGCCCCAGCGGGTGGGCTCAGG...CATAGCCCCTAACAGGTACAGGAGACACAAGCGGGGAACCACTACACTTAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR TCA 90 bp CTGGGGAGCCTCAGGCAGCCCTGCTCCTTCCCGTGTCTGGTTGGTCCTCCTGCAGATGAGAAAGATGGCTaGGCTCTGCGCAATGCAATG +
Preference number: 4 (lower is better)
Translates to: LGSLRQPCSFPCLVGPPADEKDG*ALRNAM
Trigger: CATTGCATTGCGCAGAGCTCAGCCATCTTTCTCATC...TGCAGGAGGACCAACCAGACACGGGAAGGAGCAGGGCTGCCTGAGGCTCCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
CDS-3UTR TCA 90 bp GGGCTCTGGCAATGTGTACTCGCTTCAGGGAACCCCCTCCTGAGCCCACCCGCTCATTGTCTTCCCTCCTaGACATTCTCCCTAGGACCC +
Preference number: 4 (lower is better)
Translates to: GLWQCVLASGNPLLSPPAHCLPS*TFSLGP
Trigger: GGGTCCTAGGGAGAATGTTCAGGAGGGAAGACAATG...AGCGGGTGGGCTCAGGAGGGGGTTCCCTGAAGCGAGTACACATTGCCAGAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR TCA 90 bp CTGGGGAGCCTCAGGCAGCCCTGCTCCTTCCCGTGTCTGGTTGGTCCTCCTGCATGGGCATTATCTCAGTaGCCTGCTCTAGCCAGTCTT +
Preference number: 4 (lower is better)
Translates to: LGSLRQPCSFPCLVGPPAWALSQ*PALASL
Trigger: AAGACTGGCTAGAGCAGGTCACTGAGATAATGCCCA...TGCAGGAGGACCAACCAGACACGGGAAGGAGCAGGGCTGCCTGAGGCTCCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR TCA 90 bp CTGTTAGGGGCTATGGGCCCGGCCCCCACTGAACCAGATGCTATTTGGTCTTGGGGAGGACACCCTCGCTaGTCCAAGAGCTCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: LLGAMGPAPTEPDAIWSWGGHPR*SKSSSL
Trigger: CAAGCTGGAGCTCTTGGATCAGCGAGGGTGTCCTCC...CCAAGACCAAATAGCATCTGGTTCAGTGGGGGCCGGGCCCATAGCCCCTAACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR TCA 90 bp GGCCCCAGGATCCACCTCTTGCCAGGATGGTGGGCTCTGGCAATGTGTACTCGCAGTGCTTCGGTCTTCTaGGCCTATGTTTCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: GPRIHLLPGWWALAMCTRSASVF*AYVSQG
Trigger: GCCCTGGGAAACATAGGCTCAGAAGACCGAAGCACT...GCGAGTACACATTGCCAGAGCCCACCATCCTGGCAAGAGGTGGATCCTGGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR TCA 90 bp CTGTTAGGGGCTATGGGCCCGGCCCCCACTGAACCAGATGCTATTTGGTCTTGGTGGTGCAGGGGCTTATaGATGCTGCCTTCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: LLGAMGPAPTEPDAIWSWWCRGL*MLPSWG
Trigger: GCCCCAGGAAGGCAGCATTCATAAGCCCCTGCACCA...CCAAGACCAAATAGCATCTGGTTCAGTGGGGGCCGGGCCCATAGCCCCTAACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR TCA 90 bp CTGTTAGGGGCTATGGGCCCGGCCCCCACTGAACCAGATGCTATTTGGTCTTGGACAGCCACTCCCTGCTaGCTTCCTCCTGCTGTGGGT +
Preference number: 4 (lower is better)
Translates to: LLGAMGPAPTEPDAIWSWTATPC*LPPAVG
Trigger: ACCCACAGCAGGAGGAAGTCAGCAGGGAGTGGCTGT...CCAAGACCAAATAGCATCTGGTTCAGTGGGGGCCGGGCCCATAGCCCCTAACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR GCA 90 bp CTGTTAGGGGCTATGGGCCCGGCCCCCACTGAACCAGATGCTATTTGGTCTTGGACCCAGCACCCTCCTTaGTGGAGTGAAGGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: LLGAMGPAPTEPDAIWSWTQHPP*WSEGWQ
Trigger: CTGCCAGCCTTCACTCCAGCAAGGAGGGTGCTGGGT...CCAAGACCAAATAGCATCTGGTTCAGTGGGGGCCGGGCCCATAGCCCCTAACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
CDS-3UTR GCA 90 bp CTGGGGAGCCTCAGGCAGCCCTGCTCCTTCCCGTGTCTGGTTGGTCCTCCTGCACACACAGCTTCCTCCTaGTGTGGGTTCTTCCTCAAA +
Preference number: 4 (lower is better)
Translates to: LGSLRQPCSFPCLVGPPAHTASS*CGFFLK
Trigger: TTTGAGGAAGAACCCACAGCAGGAGGAAGCTGTGTG...TGCAGGAGGACCAACCAGACACGGGAAGGAGCAGGGCTGCCTGAGGCTCCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361887.5
CDS-3UTR GCA 90 bp GGGCTCTGGCAATGTGTACTCGCTTCAGGGAACCCCCTCCTGAGCCCACCCGCTAGAGACACTGGCTTCTaGTCTTGCCTGTCTACCGGA +
Preference number: 4 (lower is better)
Translates to: GLWQCVLASGNPLLSPPARDTGF*SCLSTG
Trigger: TCCGGTAGACAGGCAAGAGCAGAAGCCAGTGTCTCT...AGCGGGTGGGCTCAGGAGGGGGTTCCCTGAAGCGAGTACACATTGCCAGAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR GCA 90 bp GGGCTCTGGCAATGTGTACTCGCTTCAGGGAACCCCCTCCTGAGCCCACCCGCTTGCCTAACAGCCGCCTaGGTTTCACTAATGGGGGTA +
Preference number: 4 (lower is better)
Translates to: GLWQCVLASGNPLLSPPACLTAA*VSLMGV
Trigger: TACCCCCATTAGTGAAACGCAGGCGGCTGTTAGGCA...AGCGGGTGGGCTCAGGAGGGGGTTCCCTGAAGCGAGTACACATTGCCAGAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR CCA 90 bp CTGGGGAGCCTCAGGCAGCCCTGCTCCTTCCCGTGTCTGGTTGGTCCTCCTGCAGCAAGAGAGGTAGAGTaGCCCTCTTTCTCAGGAATG +
Preference number: 4 (lower is better)
Translates to: LGSLRQPCSFPCLVGPPAAREVE*PSFSGM
Trigger: CATTCCTGAGAAAGAGGGCCACTCTACCTCTCTTGC...TGCAGGAGGACCAACCAGACACGGGAAGGAGCAGGGCTGCCTGAGGCTCCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
CDS-3UTR CCA 90 bp GGCCCCAGGATCCACCTCTTGCCAGGATGGTGGGCTCTGGCAATGTGTACTCGCCCTCCCTGTATGGTCTaGGGGCTGCTGTCGCTAAAA +
Preference number: 4 (lower is better)
Translates to: GPRIHLLPGWWALAMCTRPPCMV*GLLSLK
Trigger: TTTTAGCGACAGCAGCCCCCAGACCATACAGGGAGG...GCGAGTACACATTGCCAGAGCCCACCATCCTGGCAAGAGGTGGATCCTGGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR CCA 90 bp CTGTTAGGGGCTATGGGCCCGGCCCCCACTGAACCAGATGCTATTTGGTCTTGGGTAAGCCTCCCTGTATaGTCTGGGGGCTGCTGTCGC +
Preference number: 4 (lower is better)
Translates to: LLGAMGPAPTEPDAIWSWVSLPV*SGGCCR
Trigger: GCGACAGCAGCCCCCAGACCATACAGGGAGGCTTAC...CCAAGACCAAATAGCATCTGGTTCAGTGGGGGCCGGGCCCATAGCCCCTAACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR CCA 90 bp GGCCCCAGGATCCACCTCTTGCCAGGATGGTGGGCTCTGGCAATGTGTACTCGCTTGGGATACGTGGCCTaGCCATGGTCTTCTCCCCTA +
Preference number: 4 (lower is better)
Translates to: GPRIHLLPGWWALAMCTRLGYVA*PWSSPL
Trigger: TAGGGGAGAAGACCATGGCCAGGCCACGTATCCCAA...GCGAGTACACATTGCCAGAGCCCACCATCCTGGCAAGAGGTGGATCCTGGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR CCA 90 bp GGGCTCTGGCAATGTGTACTCGCTTCAGGGAACCCCCTCCTGAGCCCACCCGCTTCTGGTTTTCAGCCTTaGGATACGTGGCCTGGCCAT +
Preference number: 4 (lower is better)
Translates to: GLWQCVLASGNPLLSPPASGFQP*DTWPGH
Trigger: ATGGCCAGGCCACGTATCCCAAGGCTGAAAACCAGA...AGCGGGTGGGCTCAGGAGGGGGTTCCCTGAAGCGAGTACACATTGCCAGAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR CCA 90 bp CTGTTAGGGGCTATGGGCCCGGCCCCCACTGAACCAGATGCTATTTGGTCTTGGCTTCCCACCGTCTCCTaGAACTGCGCTGGGGTACTC +
Preference number: 4 (lower is better)
Translates to: LLGAMGPAPTEPDAIWSWLPTVS*NCAGVL
Trigger: GAGTACCCCAGCGCAGTTCCAGGAGACGGTGGGAAG...CCAAGACCAAATAGCATCTGGTTCAGTGGGGGCCGGGCCCATAGCCCCTAACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR CCA 90 bp AAGTTCCCTGTTAGTGTAAGCTGCCCCTTCCCCTTGTTCAAATGTCCCTGCTGCCCTGAGCCCACCCGCTaGGGCAGGGCCCTGCCCTAT +
Preference number: 4 (lower is better)
Translates to: KFPVSVSCPFPLFKCPCCPEPTR*GRALPY
Trigger: ATAGGGCAGGGCCCTGCCCCAGCGGGTGGGCTCAGG...GCAGCAGGGACATTTGAACAAGGGGAAGGGGCAGCTTACACTAACAGGGAACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR CCA 90 bp GGCCCCAGGATCCACCTCTTGCCAGGATGGTGGGCTCTGGCAATGTGTACTCGCCACCTCTTGCCAGGATaGTGGGCTCTGGCAATGTGT +
Preference number: 4 (lower is better)
Translates to: GPRIHLLPGWWALAMCTRHLLPG*WALAMC
Trigger: ACACATTGCCAGAGCCCACCATCCTGGCAAGAGGTG...GCGAGTACACATTGCCAGAGCCCACCATCCTGGCAAGAGGTGGATCCTGGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR TCA 90 bp GGGCTCTGGCAATGTGTACTCGCTTCAGGGAACCCCCTCCTGAGCCCACCCGCTGCCTTCACAGTGTCCTaGATTTCCACCTCACTACAC +
Preference number: 4 (lower is better)
Translates to: GLWQCVLASGNPLLSPPAAFTVS*ISTSLH
Trigger: GTGTAGTGAGGTGGAAATTCAGGACACTGTGAAGGC...AGCGGGTGGGCTCAGGAGGGGGTTCCCTGAAGCGAGTACACATTGCCAGAGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR TCA 90 bp CTGGGGAGCCTCAGGCAGCCCTGCTCCTTCCCGTGTCTGGTTGGTCCTCCTGCATGTCAGCCAGTTCAATaGAGACTGCCTTGGCATTGT +
Preference number: 4 (lower is better)
Translates to: LGSLRQPCSFPCLVGPPACQPVQ*RLPWHC
Trigger: ACAATGCCAAGGCAGTCTTCATTGAACTGGCTGACA...TGCAGGAGGACCAACCAGACACGGGAAGGAGCAGGGCTGCCTGAGGCTCCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR TCA 90 bp CTGTTAGGGGCTATGGGCCCGGCCCCCACTGAACCAGATGCTATTTGGTCTTGGCCCCCGGCCTCTCCCTaGTGGCTTCTCCTTATTCTT +
Preference number: 4 (lower is better)
Translates to: LLGAMGPAPTEPDAIWSWPPASP*WLLLIL
Trigger: AAGAATAAGGAGAAGCCATCAGGGAGAGGCCGGGGG...CCAAGACCAAATAGCATCTGGTTCAGTGGGGGCCGGGCCCATAGCCCCTAACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR TCA 90 bp GTGCTAAGTGTAGTGGTTCCCCGCTTGTGTCTCCTGTACCTGTTAGGGGCTATGGCCTGCACGGTGGCCTaGGGTGCAGAGACACTGGCT +
Preference number: 4 (lower is better)
Translates to: VLSVVVPRLCLLYLLGAMACTVA*GAETLA
Trigger: AGCCAGTGTCTCTGCACCTCAGGCCACCGTGCAGGC...CATAGCCCCTAACAGGTACAGGAGACACAAGCGGGGAACCACTACACTTAGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR GCA 90 bp GGCCCCAGGATCCACCTCTTGCCAGGATGGTGGGCTCTGGCAATGTGTACTCGCAGAGACACTGGCTTCTaGTCTTGCCTGTCTACCGGA +
Preference number: 4 (lower is better)
Translates to: GPRIHLLPGWWALAMCTRRDTGF*SCLSTG
Trigger: TCCGGTAGACAGGCAAGAGCAGAAGCCAGTGTCTCT...GCGAGTACACATTGCCAGAGCCCACCATCCTGGCAAGAGGTGGATCCTGGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR GCA 90 bp GGCCCCAGGATCCACCTCTTGCCAGGATGGTGGGCTCTGGCAATGTGTACTCGCTGCCTAACAGCCGCCTaGGTTTCACTAATGGGGGTA +
Preference number: 4 (lower is better)
Translates to: GPRIHLLPGWWALAMCTRCLTAA*VSLMGV
Trigger: TACCCCCATTAGTGAAACGCAGGCGGCTGTTAGGCA...GCGAGTACACATTGCCAGAGCCCACCATCCTGGCAAGAGGTGGATCCTGGGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR GCA 90 bp CTGGGGAGCCTCAGGCAGCCCTGCTCCTTCCCGTGTCTGGTTGGTCCTCCTGCACCTGTTAGTGTAAGCTaGCCCTTCCCCTTGTTCAAA +
Preference number: 4 (lower is better)
Translates to: LGSLRQPCSFPCLVGPPAPVSVS*PFPLFK
Trigger: TTTGAACAAGGGGAAGGGGCAGCTTACACTAACAGG...TGCAGGAGGACCAACCAGACACGGGAAGGAGCAGGGCTGCCTGAGGCTCCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR CCA 90 bp CTGGGGAGCCTCAGGCAGCCCTGCTCCTTCCCGTGTCTGGTTGGTCCTCCTGCAAGCGCAGCAGGAAAGTaGAGACTTTCTCTCCAATCT +
Preference number: 4 (lower is better)
Translates to: LGSLRQPCSFPCLVGPPASAAGK*RLSLQS
Trigger: AGATTGGAGAGAAAGTCTCCACTTTCCTGCTGCGCT...TGCAGGAGGACCAACCAGACACGGGAAGGAGCAGGGCTGCCTGAGGCTCCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR CCA 90 bp GGCCCCAGGATCCACCTCTTGCCAGGATGGTGGGCTCTGGCAATGTGTACTCGCTCTGGTTTTCAGCCTTaGGATACGTGGCCTGGCCAT +
Preference number: 4 (lower is better)
Translates to: GPRIHLLPGWWALAMCTRSGFQP*DTWPGH
Trigger: ATGGCCAGGCCACGTATCCCAAGGCTGAAAACCAGA...GCGAGTACACATTGCCAGAGCCCACCATCCTGGCAAGAGGTGGATCCTGGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR CCA 90 bp GGCCCCAGGATCCACCTCTTGCCAGGATGGTGGGCTCTGGCAATGTGTACTCGCCACAGGGTAGATATTTaGGGGTGTCCAGAGGACCAG +
Preference number: 4 (lower is better)
Translates to: GPRIHLLPGWWALAMCTRHRVDI*GCPEDQ
Trigger: CTGGTCCTCTGGACACCCCCAAATATCTACCCTGTG...GCGAGTACACATTGCCAGAGCCCACCATCCTGGCAAGAGGTGGATCCTGGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR CCA 90 bp GGCCCCAGGATCCACCTCTTGCCAGGATGGTGGGCTCTGGCAATGTGTACTCGCTGCGCTGGGGTACTCTaGAAAGGAGCTGCTCAGATA +
Preference number: 4 (lower is better)
Translates to: GPRIHLLPGWWALAMCTRCAGVL*KGAAQI
Trigger: TATCTGAGCAGCTCCTTTCCAGAGTACCCCAGCGCA...GCGAGTACACATTGCCAGAGCCCACCATCCTGGCAAGAGGTGGATCCTGGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR CCA 90 bp GGCCCCAGGATCCACCTCTTGCCAGGATGGTGGGCTCTGGCAATGTGTACTCGCCTCTTGCCAGGATGGTaGGCTCTGGCAATGTGTACT +
Preference number: 4 (lower is better)
Translates to: GPRIHLLPGWWALAMCTRLLPGW*ALAMCT
Trigger: AGTACACATTGCCAGAGCCCACCATCCTGGCAAGAG...GCGAGTACACATTGCCAGAGCCCACCATCCTGGCAAGAGGTGGATCCTGGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR CCA 90 bp GGGCTCTGGCAATGTGTACTCGCTTCAGGGAACCCCCTCCTGAGCCCACCCGCTGACTTCCTCCTGCTGTaGGTTCTTCCTCAAAGTCCA +
Preference number: 4 (lower is better)
Translates to: GLWQCVLASGNPLLSPPADFLLL*VLPQSP
Trigger: TGGACTTTGAGGAAGAACCCACAGCAGGAGGAAGTC...AGCGGGTGGGCTCAGGAGGGGGTTCCCTGAAGCGAGTACACATTGCCAGAGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR CCA 90 bp GTGCTAAGTGTAGTGGTTCCCCGCTTGTGTCTCCTGTACCTGTTAGGGGCTATGCTTCGGGTGCCTTGCTaGGTTGGCCCTGCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: VLSVVVPRLCLLYLLGAMLRVPC*VGPAGS
Trigger: GCTGCCAGCAGGGCCAACCCAGCAAGGCACCCGAAG...CATAGCCCCTAACAGGTACAGGAGACACAAGCGGGGAACCACTACACTTAGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535214.6
CDS-3UTR TCA 90 bp GTGCTAAGTGTAGTGGTTCCCCGCTTGTGTCTCCTGTACCTGTTAGGGGCTATGGACACCTGGGGACACTaGCGAGCCCTCCAGGCAGAA +
Preference number: 4 (lower is better)
Translates to: VLSVVVPRLCLLYLLGAMDTWGH*RALQAE
Trigger: TTCTGCCTGGAGGGCTCGTCAGTGTCCCCAGGTGTC...CATAGCCCCTAACAGGTACAGGAGACACAAGCGGGGAACCACTACACTTAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361887.5
ENST00000439251.3
CDS-3UTR TCA 90 bp AAGTTCCCTGTTAGTGTAAGCTGCCCCTTCCCCTTGTTCAAATGTCCCTGCTGCTCAGGAGGCAGGGCCTaGCACCTGGGGACACTGACG +
Preference number: 4 (lower is better)
Translates to: KFPVSVSCPFPLFKCPCCSGGRA*HLGTLT
Trigger: CGTCAGTGTCCCCAGGTGTCAGGCCCTGCCTCCTGA...GCAGCAGGGACATTTGAACAAGGGGAAGGGGCAGCTTACACTAACAGGGAACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361887.5
ENST00000439251.3
CDS-3UTR TCA 90 bp GGCCCCAGGATCCACCTCTTGCCAGGATGGTGGGCTCTGGCAATGTGTACTCGCGCCTTCACAGTGTCCTaGATTTCCACCTCACTACAC +
Preference number: 4 (lower is better)
Translates to: GPRIHLLPGWWALAMCTRAFTVS*ISTSLH
Trigger: GTGTAGTGAGGTGGAAATTCAGGACACTGTGAAGGC...GCGAGTACACATTGCCAGAGCCCACCATCCTGGCAAGAGGTGGATCCTGGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR TCA 90 bp GGCCCCAGGATCCACCTCTTGCCAGGATGGTGGGCTCTGGCAATGTGTACTCGCTGGGCATTATCTCAGTaGCCTGCTCTAGCCAGTCTT +
Preference number: 4 (lower is better)
Translates to: GPRIHLLPGWWALAMCTRWALSQ*PALASL
Trigger: AAGACTGGCTAGAGCAGGTCACTGAGATAATGCCCA...GCGAGTACACATTGCCAGAGCCCACCATCCTGGCAAGAGGTGGATCCTGGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR TCA 90 bp GTGCTAAGTGTAGTGGTTCCCCGCTTGTGTCTCCTGTACCTGTTAGGGGCTATGGACACGGAACAGCAGTaGGCAGAGCCCGGGCCTGAT +
Preference number: 4 (lower is better)
Translates to: VLSVVVPRLCLLYLLGAMDTEQQ*AEPGPD
Trigger: ATCAGGCCCGGGCTCTGCTCACTGCTGTTCCGTGTC...CATAGCCCCTAACAGGTACAGGAGACACAAGCGGGGAACCACTACACTTAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR GCA 90 bp GGCCCCAGGATCCACCTCTTGCCAGGATGGTGGGCTCTGGCAATGTGTACTCGCATAACTCTGAGCCACTaGCACGTAGGAAGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: GPRIHLLPGWWALAMCTRITLSH*HVGRQK
Trigger: CTTCTGCCTTCCTACGTGGCAGTGGCTCAGAGTTAT...GCGAGTACACATTGCCAGAGCCCACCATCCTGGCAAGAGGTGGATCCTGGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR GCA 90 bp GTGCTAAGTGTAGTGGTTCCCCGCTTGTGTCTCCTGTACCTGTTAGGGGCTATGTCTCGGCAGGGAGGCTaGAACATCCCAGGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: VLSVVVPRLCLLYLLGAMSRQGG*NIPGLW
Trigger: CCAGAGCCCTGGGATGTTGCAGCCTCCCTGCCGAGA...CATAGCCCCTAACAGGTACAGGAGACACAAGCGGGGAACCACTACACTTAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR GCA 90 bp CTGTTAGGGGCTATGGGCCCGGCCCCCACTGAACCAGATGCTATTTGGTCTTGGGACGAATCATGTCTGTaGTGCGCACTGACAAGGGGC +
Preference number: 4 (lower is better)
Translates to: LLGAMGPAPTEPDAIWSWDESCL*CALTRG
Trigger: GCCCCTTGTCAGTGCGCAGCACAGACATGATTCGTC...CCAAGACCAAATAGCATCTGGTTCAGTGGGGGCCGGGCCCATAGCCCCTAACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR GCA 90 bp GTGCTAAGTGTAGTGGTTCCCCGCTTGTGTCTCCTGTACCTGTTAGGGGCTATGTCCCAACTCCTCTCCTaGAGCCTGTGGCCCCTCCCT +
Preference number: 4 (lower is better)
Translates to: VLSVVVPRLCLLYLLGAMSQLLS*SLWPLP
Trigger: AGGGAGGGGCCACAGGCTGCAGGAGAGGAGTTGGGA...CATAGCCCCTAACAGGTACAGGAGACACAAGCGGGGAACCACTACACTTAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR GCA 90 bp GTGCTAAGTGTAGTGGTTCCCCGCTTGTGTCTCCTGTACCTGTTAGGGGCTATGCATGGCCCCAGCCCCTaGCTCGTTTCCCAACTCCTC +
Preference number: 4 (lower is better)
Translates to: VLSVVVPRLCLLYLLGAMHGPSP*LVSQLL
Trigger: GAGGAGTTGGGAAACGAGGCAGGGGCTGGGGCCATG...CATAGCCCCTAACAGGTACAGGAGACACAAGCGGGGAACCACTACACTTAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR GCA 90 bp CTGTTAGGGGCTATGGGCCCGGCCCCCACTGAACCAGATGCTATTTGGTCTTGGTGCCAGGGGAAGGAGTaGTTCGGTCTTCTGAGCCTA +
Preference number: 4 (lower is better)
Translates to: LLGAMGPAPTEPDAIWSWCQGKE*FGLLSL
Trigger: TAGGCTCAGAAGACCGAAGCACTCCTTCCCCTGGCA...CCAAGACCAAATAGCATCTGGTTCAGTGGGGGCCGGGCCCATAGCCCCTAACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR GCA 90 bp AAGTTCCCTGTTAGTGTAAGCTGCCCCTTCCCCTTGTTCAAATGTCCCTGCTGCTTGCTGGGTTGGCCCTaGTGGCAGCGCGGATGCTGC +
Preference number: 4 (lower is better)
Translates to: KFPVSVSCPFPLFKCPCCLLGWP*WQRGCC
Trigger: GCAGCATCCGCGCTGCCAGCAGGGCCAACCCAGCAA...GCAGCAGGGACATTTGAACAAGGGGAAGGGGCAGCTTACACTAACAGGGAACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535214.6
CDS-3UTR GCA 90 bp AAGTTCCCTGTTAGTGTAAGCTGCCCCTTCCCCTTGTTCAAATGTCCCTGCTGCGTGCTTCGGGTGCCTTaGTGGGTTGGCCCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: KFPVSVSCPFPLFKCPCCVLRVP*WVGPAG
Trigger: GCCAGCAGGGCCAACCCAGCAAGGCACCCGAAGCAC...GCAGCAGGGACATTTGAACAAGGGGAAGGGGCAGCTTACACTAACAGGGAACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535214.6
CDS-3UTR CCA 90 bp GGCCCCAGGATCCACCTCTTGCCAGGATGGTGGGCTCTGGCAATGTGTACTCGCAACATCCCAGGGCTCTaGCCACATCTGTCATACTTC +
Preference number: 4 (lower is better)
Translates to: GPRIHLLPGWWALAMCTRNIPGL*PHLSYF
Trigger: GAAGTATGACAGATGTGGCCAGAGCCCTGGGATGTT...GCGAGTACACATTGCCAGAGCCCACCATCCTGGCAAGAGGTGGATCCTGGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR CCA 90 bp CTGGGGAGCCTCAGGCAGCCCTGCTCCTTCCCGTGTCTGGTTGGTCCTCCTGCATTAACTCCAGAAAATTaGGAGGACACCCTCGCTGAT +
Preference number: 4 (lower is better)
Translates to: LGSLRQPCSFPCLVGPPALTPEN*EDTLAD
Trigger: ATCAGCGAGGGTGTCCTCCCAATTTTCTGGAGTTAA...TGCAGGAGGACCAACCAGACACGGGAAGGAGCAGGGCTGCCTGAGGCTCCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR CCA 90 bp CTGTTAGGGGCTATGGGCCCGGCCCCCACTGAACCAGATGCTATTTGGTCTTGGCCTCCCTGTATGGTCTaGGGGCTGCTGTCGCTAAAA +
Preference number: 4 (lower is better)
Translates to: LLGAMGPAPTEPDAIWSWPPCMV*GLLSLK
Trigger: TTTTAGCGACAGCAGCCCCCAGACCATACAGGGAGG...CCAAGACCAAATAGCATCTGGTTCAGTGGGGGCCGGGCCCATAGCCCCTAACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR CCA 90 bp CTGTTAGGGGCTATGGGCCCGGCCCCCACTGAACCAGATGCTATTTGGTCTTGGTACGTGGCCTGGCCATaGTCTTCTCCCCTAGTGCTT +
Preference number: 4 (lower is better)
Translates to: LLGAMGPAPTEPDAIWSWYVAWP*SSPLVL
Trigger: AAGCACTAGGGGAGAAGACCATGGCCAGGCCACGTA...CCAAGACCAAATAGCATCTGGTTCAGTGGGGGCCGGGCCCATAGCCCCTAACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR CCA 90 bp CTGTTAGGGGCTATGGGCCCGGCCCCCACTGAACCAGATGCTATTTGGTCTTGGTTGGGATACGTGGCCTaGCCATGGTCTTCTCCCCTA +
Preference number: 4 (lower is better)
Translates to: LLGAMGPAPTEPDAIWSWLGYVA*PWSSPL
Trigger: TAGGGGAGAAGACCATGGCCAGGCCACGTATCCCAA...CCAAGACCAAATAGCATCTGGTTCAGTGGGGGCCGGGCCCATAGCCCCTAACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR TCA 90 bp GGGCTCTGGCAATGTGTACTCGCTTCAGGGAACCCCCTCCTGAGCCCACCCGCTCCACTTTCTATGGACTaGTCTAATACTAGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: GLWQCVLASGNPLLSPPAPLSMD*SNTRAA
Trigger: TGCTGCCCTAGTATTAGATCAGTCCATAGAAAGTGG...AGCGGGTGGGCTCAGGAGGGGGTTCCCTGAAGCGAGTACACATTGCCAGAGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR TCA 90 bp CTGTTAGGGGCTATGGGCCCGGCCCCCACTGAACCAGATGCTATTTGGTCTTGGCATTGTCTTCCCTCCTaGACATTCTCCCTAGGACCC +
Preference number: 4 (lower is better)
Translates to: LLGAMGPAPTEPDAIWSWHCLPS*TFSLGP
Trigger: GGGTCCTAGGGAGAATGTTCAGGAGGGAAGACAATG...CCAAGACCAAATAGCATCTGGTTCAGTGGGGGCCGGGCCCATAGCCCCTAACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR TCA 90 bp GGCCCCAGGATCCACCTCTTGCCAGGATGGTGGGCTCTGGCAATGTGTACTCGCTGTCAGCCAGTTCAATaGAGACTGCCTTGGCATTGT +
Preference number: 4 (lower is better)
Translates to: GPRIHLLPGWWALAMCTRCQPVQ*RLPWHC
Trigger: ACAATGCCAAGGCAGTCTTCATTGAACTGGCTGACA...GCGAGTACACATTGCCAGAGCCCACCATCCTGGCAAGAGGTGGATCCTGGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR TCA 90 bp GTGCTAAGTGTAGTGGTTCCCCGCTTGTGTCTCCTGTACCTGTTAGGGGCTATGGTCTGTGCTGCGCACTaGCAAGGGGCTCTTGTGCAC +
Preference number: 4 (lower is better)
Translates to: VLSVVVPRLCLLYLLGAMVCAAH*QGALVH
Trigger: GTGCACAAGAGCCCCTTGTCAGTGCGCAGCACAGAC...CATAGCCCCTAACAGGTACAGGAGACACAAGCGGGGAACCACTACACTTAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR TCA 90 bp GTGCTAAGTGTAGTGGTTCCCCGCTTGTGTCTCCTGTACCTGTTAGGGGCTATGGGAGGACACCCTCGCTaGTCCAAGAGCTCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: VLSVVVPRLCLLYLLGAMGGHPR*SKSSSL
Trigger: CAAGCTGGAGCTCTTGGATCAGCGAGGGTGTCCTCC...CATAGCCCCTAACAGGTACAGGAGACACAAGCGGGGAACCACTACACTTAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR TCA 90 bp AAGTTCCCTGTTAGTGTAAGCTGCCCCTTCCCCTTGTTCAAATGTCCCTGCTGCGGGCCCGGCCCCCACTaGACCAGATGCTATTTGGTC +
Preference number: 4 (lower is better)
Translates to: KFPVSVSCPFPLFKCPCCGPGPH*TRCYLV
Trigger: GACCAAATAGCATCTGGTTCAGTGGGGGCCGGGCCC...GCAGCAGGGACATTTGAACAAGGGGAAGGGGCAGCTTACACTAACAGGGAACTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR TCA 90 bp AAGTTCCCTGTTAGTGTAAGCTGCCCCTTCCCCTTGTTCAAATGTCCCTGCTGCGACACGGAACAGCAGTaGGCAGAGCCCGGGCCTGAT +
Preference number: 4 (lower is better)
Translates to: KFPVSVSCPFPLFKCPCCDTEQQ*AEPGPD
Trigger: ATCAGGCCCGGGCTCTGCTCACTGCTGTTCCGTGTC...GCAGCAGGGACATTTGAACAAGGGGAAGGGGCAGCTTACACTAACAGGGAACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR GCA 90 bp GTGCTAAGTGTAGTGGTTCCCCGCTTGTGTCTCCTGTACCTGTTAGGGGCTATGACCCAGCACCCTCCTTaGTGGAGTGAAGGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: VLSVVVPRLCLLYLLGAMTQHPP*WSEGWQ
Trigger: CTGCCAGCCTTCACTCCAGCAAGGAGGGTGCTGGGT...CATAGCCCCTAACAGGTACAGGAGACACAAGCGGGGAACCACTACACTTAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
CDS-3UTR GCA 90 bp GTGCTAAGTGTAGTGGTTCCCCGCTTGTGTCTCCTGTACCTGTTAGGGGCTATGACTGGCTTCTGCTCTTaGCTGTCTACCGGAGGCCCC +
Preference number: 4 (lower is better)
Translates to: VLSVVVPRLCLLYLLGAMTGFCS*LSTGGP
Trigger: GGGGCCTCCGGTAGACAGGCAAGAGCAGAAGCCAGT...CATAGCCCCTAACAGGTACAGGAGACACAAGCGGGGAACCACTACACTTAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR GCA 90 bp AAGTTCCCTGTTAGTGTAAGCTGCCCCTTCCCCTTGTTCAAATGTCCCTGCTGCTCCCAACTCCTCTCCTaGAGCCTGTGGCCCCTCCCT +
Preference number: 4 (lower is better)
Translates to: KFPVSVSCPFPLFKCPCCSQLLS*SLWPLP
Trigger: AGGGAGGGGCCACAGGCTGCAGGAGAGGAGTTGGGA...GCAGCAGGGACATTTGAACAAGGGGAAGGGGCAGCTTACACTAACAGGGAACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR GCA 90 bp AAGTTCCCTGTTAGTGTAAGCTGCCCCTTCCCCTTGTTCAAATGTCCCTGCTGCCATGGCCCCAGCCCCTaGCTCGTTTCCCAACTCCTC +
Preference number: 4 (lower is better)
Translates to: KFPVSVSCPFPLFKCPCCHGPSP*LVSQLL
Trigger: GAGGAGTTGGGAAACGAGGCAGGGGCTGGGGCCATG...GCAGCAGGGACATTTGAACAAGGGGAAGGGGCAGCTTACACTAACAGGGAACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR GCA 90 bp CTGTTAGGGGCTATGGGCCCGGCCCCCACTGAACCAGATGCTATTTGGTCTTGGCCCTGCCCTATAGACTaGACAGGACAGTCACAGGAT +
Preference number: 4 (lower is better)
Translates to: LLGAMGPAPTEPDAIWSWPCPID*TGQSQD
Trigger: ATCCTGTGACTGTCCTGTGCAGTCTATAGGGCAGGG...CCAAGACCAAATAGCATCTGGTTCAGTGGGGGCCGGGCCCATAGCCCCTAACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR GCA 90 bp GTGCTAAGTGTAGTGGTTCCCCGCTTGTGTCTCCTGTACCTGTTAGGGGCTATGCCAGGATCCACCTCTTaGCAGGATGGTGGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: VLSVVVPRLCLLYLLGAMPGSTS*QDGGLW
Trigger: CCAGAGCCCACCATCCTGGCAAGAGGTGGATCCTGG...CATAGCCCCTAACAGGTACAGGAGACACAAGCGGGGAACCACTACACTTAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR CCA 90 bp CTGTTAGGGGCTATGGGCCCGGCCCCCACTGAACCAGATGCTATTTGGTCTTGGGTAGGAAGGCAGAAGTaGTCCCAGGTTTCACACAGC +
Preference number: 4 (lower is better)
Translates to: LLGAMGPAPTEPDAIWSWVGRQK*SQVSHS
Trigger: GCTGTGTGAAACCTGGGACCACTTCTGCCTTCCTAC...CCAAGACCAAATAGCATCTGGTTCAGTGGGGGCCGGGCCCATAGCCCCTAACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR CCA 90 bp GGGCTCTGGCAATGTGTACTCGCTTCAGGGAACCCCCTCCTGAGCCCACCCGCTTTAACTCCAGAAAATTaGGAGGACACCCTCGCTGAT +
Preference number: 4 (lower is better)
Translates to: GLWQCVLASGNPLLSPPALTPEN*EDTLAD
Trigger: ATCAGCGAGGGTGTCCTCCCAATTTTCTGGAGTTAA...AGCGGGTGGGCTCAGGAGGGGGTTCCCTGAAGCGAGTACACATTGCCAGAGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR CCA 90 bp GTGCTAAGTGTAGTGGTTCCCCGCTTGTGTCTCCTGTACCTGTTAGGGGCTATGACCTTGCCTGCACGGTaGCCTGAGGTGCAGAGACAC +
Preference number: 4 (lower is better)
Translates to: VLSVVVPRLCLLYLLGAMTLPAR*PEVQRH
Trigger: GTGTCTCTGCACCTCAGGCCACCGTGCAGGCAAGGT...CATAGCCCCTAACAGGTACAGGAGACACAAGCGGGGAACCACTACACTTAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR CCA 90 bp CTGTTAGGGGCTATGGGCCCGGCCCCCACTGAACCAGATGCTATTTGGTCTTGGCACAGGGTAGATATTTaGGGGTGTCCAGAGGACCAG +
Preference number: 4 (lower is better)
Translates to: LLGAMGPAPTEPDAIWSWHRVDI*GCPEDQ
Trigger: CTGGTCCTCTGGACACCCCCAAATATCTACCCTGTG...CCAAGACCAAATAGCATCTGGTTCAGTGGGGGCCGGGCCCATAGCCCCTAACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR CCA 90 bp CTGTTAGGGGCTATGGGCCCGGCCCCCACTGAACCAGATGCTATTTGGTCTTGGTGCGCTGGGGTACTCTaGAAAGGAGCTGCTCAGATA +
Preference number: 4 (lower is better)
Translates to: LLGAMGPAPTEPDAIWSWCAGVL*KGAAQI
Trigger: TATCTGAGCAGCTCCTTTCCAGAGTACCCCAGCGCA...CCAAGACCAAATAGCATCTGGTTCAGTGGGGGCCGGGCCCATAGCCCCTAACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR CCA 90 bp CTGTTAGGGGCTATGGGCCCGGCCCCCACTGAACCAGATGCTATTTGGTCTTGGCTCTTGCCAGGATGGTaGGCTCTGGCAATGTGTACT +
Preference number: 4 (lower is better)
Translates to: LLGAMGPAPTEPDAIWSWLLPGW*ALAMCT
Trigger: AGTACACATTGCCAGAGCCCACCATCCTGGCAAGAG...CCAAGACCAAATAGCATCTGGTTCAGTGGGGGCCGGGCCCATAGCCCCTAACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR TCA 90 bp AAGTTCCCTGTTAGTGTAAGCTGCCCCTTCCCCTTGTTCAAATGTCCCTGCTGCCCCTCCTTGCTGGAGTaGAGGCTGGCAGCAAGAGAG +
Preference number: 4 (lower is better)
Translates to: KFPVSVSCPFPLFKCPCCPSLLE*RLAARE
Trigger: CTCTCTTGCTGCCAGCCTTCACTCCAGCAAGGAGGG...GCAGCAGGGACATTTGAACAAGGGGAAGGGGCAGCTTACACTAACAGGGAACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
CDS-3UTR TCA 90 bp GGGCTCTGGCAATGTGTACTCGCTTCAGGGAACCCCCTCCTGAGCCCACCCGCTGCAATCAGCTCAGTTTaGCAGCACTCAAATAACTCT +
Preference number: 4 (lower is better)
Translates to: GLWQCVLASGNPLLSPPAAISSV*QHSNNS
Trigger: AGAGTTATTTGAGTGCTGTCAAACTGAGCTGATTGC...AGCGGGTGGGCTCAGGAGGGGGTTCCCTGAAGCGAGTACACATTGCCAGAGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR TCA 90 bp GGGCTCTGGCAATGTGTACTCGCTTCAGGGAACCCCCTCCTGAGCCCACCCGCTAGTAGTTCAGTCTACTaGGAAACTCATCATCTGGGT +
Preference number: 4 (lower is better)
Translates to: GLWQCVLASGNPLLSPPASSSVY*ETHHLG
Trigger: ACCCAGATGATGAGTTTCTCAGTAGACTGAACTACT...AGCGGGTGGGCTCAGGAGGGGGTTCCCTGAAGCGAGTACACATTGCCAGAGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR TCA 90 bp AAGTTCCCTGTTAGTGTAAGCTGCCCCTTCCCCTTGTTCAAATGTCCCTGCTGCGTCTGTGCTGCGCACTaGCAAGGGGCTCTTGTGCAC +
Preference number: 4 (lower is better)
Translates to: KFPVSVSCPFPLFKCPCCVCAAH*QGALVH
Trigger: GTGCACAAGAGCCCCTTGTCAGTGCGCAGCACAGAC...GCAGCAGGGACATTTGAACAAGGGGAAGGGGCAGCTTACACTAACAGGGAACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR TCA 90 bp AAGTTCCCTGTTAGTGTAAGCTGCCCCTTCCCCTTGTTCAAATGTCCCTGCTGCGGAGGACACCCTCGCTaGTCCAAGAGCTCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: KFPVSVSCPFPLFKCPCCGGHPR*SKSSSL
Trigger: CAAGCTGGAGCTCTTGGATCAGCGAGGGTGTCCTCC...GCAGCAGGGACATTTGAACAAGGGGAAGGGGCAGCTTACACTAACAGGGAACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR TCA 90 bp GTGCTAAGTGTAGTGGTTCCCCGCTTGTGTCTCCTGTACCTGTTAGGGGCTATGCCCCCGGCCTCTCCCTaGTGGCTTCTCCTTATTCTT +
Preference number: 4 (lower is better)
Translates to: VLSVVVPRLCLLYLLGAMPPASP*WLLLIL
Trigger: AAGAATAAGGAGAAGCCATCAGGGAGAGGCCGGGGG...CATAGCCCCTAACAGGTACAGGAGACACAAGCGGGGAACCACTACACTTAGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR TCA 90 bp GTGCTAAGTGTAGTGGTTCCCCGCTTGTGTCTCCTGTACCTGTTAGGGGCTATGGTCACAGTCACAAGGTaGGCGTCTGCCATGCCTCCT +
Preference number: 4 (lower is better)
Translates to: VLSVVVPRLCLLYLLGAMVTVTR*ASAMPP
Trigger: AGGAGGCATGGCAGACGCTCACCTTGTGACTGTGAC...CATAGCCCCTAACAGGTACAGGAGACACAAGCGGGGAACCACTACACTTAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR GCA 90 bp AAGTTCCCTGTTAGTGTAAGCTGCCCCTTCCCCTTGTTCAAATGTCCCTGCTGCACCCAGCACCCTCCTTaGTGGAGTGAAGGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: KFPVSVSCPFPLFKCPCCTQHPP*WSEGWQ
Trigger: CTGCCAGCCTTCACTCCAGCAAGGAGGGTGCTGGGT...GCAGCAGGGACATTTGAACAAGGGGAAGGGGCAGCTTACACTAACAGGGAACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
CDS-3UTR GCA 90 bp GGGCTCTGGCAATGTGTACTCGCTTCAGGGAACCCCCTCCTGAGCCCACCCGCTATTATCTCAGTGACCTaGTCTAGCCAGTCTTCAAAG +
Preference number: 4 (lower is better)
Translates to: GLWQCVLASGNPLLSPPAIISVT*SSQSSK
Trigger: CTTTGAAGACTGGCTAGAGCAGGTCACTGAGATAAT...AGCGGGTGGGCTCAGGAGGGGGTTCCCTGAAGCGAGTACACATTGCCAGAGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR GCA 90 bp GTGCTAAGTGTAGTGGTTCCCCGCTTGTGTCTCCTGTACCTGTTAGGGGCTATGTTGTGCACGGCTTTCTaGAGCAGGGGCTCTAAGCGC +
Preference number: 4 (lower is better)
Translates to: VLSVVVPRLCLLYLLGAMLCTAF*SRGSKR
Trigger: GCGCTTAGAGCCCCTGCTGCAGAAAGCCGTGCACAA...CATAGCCCCTAACAGGTACAGGAGACACAAGCGGGGAACCACTACACTTAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR GCA 90 bp AAGTTCCCTGTTAGTGTAAGCTGCCCCTTCCCCTTGTTCAAATGTCCCTGCTGCACTGGCTTCTGCTCTTaGCTGTCTACCGGAGGCCCC +
Preference number: 4 (lower is better)
Translates to: KFPVSVSCPFPLFKCPCCTGFCS*LSTGGP
Trigger: GGGGCCTCCGGTAGACAGGCAAGAGCAGAAGCCAGT...GCAGCAGGGACATTTGAACAAGGGGAAGGGGCAGCTTACACTAACAGGGAACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR GCA 90 bp GTGCTAAGTGTAGTGGTTCCCCGCTTGTGTCTCCTGTACCTGTTAGGGGCTATGGTCGCTAAAAGACCTTaGCTGCACGGTGGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: VLSVVVPRLCLLYLLGAMVAKRP*LHGGLR
Trigger: CCTCAGGCCACCGTGCAGGCAAGGTCTTTTAGCGAC...CATAGCCCCTAACAGGTACAGGAGACACAAGCGGGGAACCACTACACTTAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR GCA 90 bp AAGTTCCCTGTTAGTGTAAGCTGCCCCTTCCCCTTGTTCAAATGTCCCTGCTGCGCAGGGGCTTATGAATaGTGCCTTCCTGGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: KFPVSVSCPFPLFKCPCCAGAYE*CLPGAP
Trigger: GGGAGCCCCAGGAAGGCAGCATTCATAAGCCCCTGC...GCAGCAGGGACATTTGAACAAGGGGAAGGGGCAGCTTACACTAACAGGGAACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR GCA 90 bp GGGCTCTGGCAATGTGTACTCGCTTCAGGGAACCCCCTCCTGAGCCCACCCGCTACTCTGGAAAGGAGCTaGTCAGATAAAAACACACAC +
Preference number: 4 (lower is better)
Translates to: GLWQCVLASGNPLLSPPATLERS*SDKNTH
Trigger: GTGTGTGTTTTTATCTGAGCAGCTCCTTTCCAGAGT...AGCGGGTGGGCTCAGGAGGGGGTTCCCTGAAGCGAGTACACATTGCCAGAGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR GCA 90 bp AAGTTCCCTGTTAGTGTAAGCTGCCCCTTCCCCTTGTTCAAATGTCCCTGCTGCAGCCTCAGGCAGCCCTaGTCCTTCCCGTGTCTGGTT +
Preference number: 4 (lower is better)
Translates to: KFPVSVSCPFPLFKCPCCSLRQP*SFPCLV
Trigger: AACCAGACACGGGAAGGAGCAGGGCTGCCTGAGGCT...GCAGCAGGGACATTTGAACAAGGGGAAGGGGCAGCTTACACTAACAGGGAACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR GCA 90 bp GTGCTAAGTGTAGTGGTTCCCCGCTTGTGTCTCCTGTACCTGTTAGGGGCTATGAGGCGTGATGGGTCCTaGTTCACTGGATCTGCCGGA +
Preference number: 4 (lower is better)
Translates to: VLSVVVPRLCLLYLLGAMRRDGS*FTGSAG
Trigger: TCCGGCAGATCCAGTGAAGCAGGACCCATCACGCCT...CATAGCCCCTAACAGGTACAGGAGACACAAGCGGGGAACCACTACACTTAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535214.6
CDS-3UTR CCA 90 bp CTGTTAGGGGCTATGGGCCCGGCCCCCACTGAACCAGATGCTATTTGGTCTTGGAACATCCCAGGGCTCTaGCCACATCTGTCATACTTC +
Preference number: 4 (lower is better)
Translates to: LLGAMGPAPTEPDAIWSWNIPGL*PHLSYF
Trigger: GAAGTATGACAGATGTGGCCAGAGCCCTGGGATGTT...CCAAGACCAAATAGCATCTGGTTCAGTGGGGGCCGGGCCCATAGCCCCTAACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR CCA 90 bp GTGCTAAGTGTAGTGGTTCCCCGCTTGTGTCTCCTGTACCTGTTAGGGGCTATGCAGCCTTGGGATACGTaGCCTGGCCATGGTCTTCTC +
Preference number: 4 (lower is better)
Translates to: VLSVVVPRLCLLYLLGAMQPWDT*PGHGLL
Trigger: GAGAAGACCATGGCCAGGCCACGTATCCCAAGGCTG...CATAGCCCCTAACAGGTACAGGAGACACAAGCGGGGAACCACTACACTTAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR CCA 90 bp GTGCTAAGTGTAGTGGTTCCCCGCTTGTGTCTCCTGTACCTGTTAGGGGCTATGTGGCCCCTCCCTGCCTaGAGTCTGGTTTTCAGCCTT +
Preference number: 4 (lower is better)
Translates to: VLSVVVPRLCLLYLLGAMWPLPA*SLVFSL
Trigger: AAGGCTGAAAACCAGACTCCAGGCAGGGAGGGGCCA...CATAGCCCCTAACAGGTACAGGAGACACAAGCGGGGAACCACTACACTTAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR CCA 90 bp GTGCTAAGTGTAGTGGTTCCCCGCTTGTGTCTCCTGTACCTGTTAGGGGCTATGATGTTTCCCAGGGCTTaGGATGGCTCATGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: VLSVVVPRLCLLYLLGAMMFPRA*DGSWPQ
Trigger: CTGGGGCCATGAGCCATCCCAAGCCCTGGGAAACAT...CATAGCCCCTAACAGGTACAGGAGACACAAGCGGGGAACCACTACACTTAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR CCA 90 bp AAGTTCCCTGTTAGTGTAAGCTGCCCCTTCCCCTTGTTCAAATGTCCCTGCTGCCTTCCCACCGTCTCCTaGAACTGCGCTGGGGTACTC +
Preference number: 4 (lower is better)
Translates to: KFPVSVSCPFPLFKCPCCLPTVS*NCAGVL
Trigger: GAGTACCCCAGCGCAGTTCCAGGAGACGGTGGGAAG...GCAGCAGGGACATTTGAACAAGGGGAAGGGGCAGCTTACACTAACAGGGAACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR TCA 90 bp GGCCCCAGGATCCACCTCTTGCCAGGATGGTGGGCTCTGGCAATGTGTACTCGCAGTAGTTCAGTCTACTaGGAAACTCATCATCTGGGT +
Preference number: 4 (lower is better)
Translates to: GPRIHLLPGWWALAMCTRSSSVY*ETHHLG
Trigger: ACCCAGATGATGAGTTTCTCAGTAGACTGAACTACT...GCGAGTACACATTGCCAGAGCCCACCATCCTGGCAAGAGGTGGATCCTGGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR TCA 90 bp GGGCTCTGGCAATGTGTACTCGCTTCAGGGAACCCCCTCCTGAGCCCACCCGCTCTTCTTCATCTCGAATaGGCTTCATTAACTCCAGAA +
Preference number: 4 (lower is better)
Translates to: GLWQCVLASGNPLLSPPALLHLE*ASLTPE
Trigger: TTCTGGAGTTAATGAAGCTCATTCGAGATGAAGAAG...AGCGGGTGGGCTCAGGAGGGGGTTCCCTGAAGCGAGTACACATTGCCAGAGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR TCA 90 bp GTGCTAAGTGTAGTGGTTCCCCGCTTGTGTCTCCTGTACCTGTTAGGGGCTATGAGTGCTTCGGTCTTCTaGGCCTATGTTTCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: VLSVVVPRLCLLYLLGAMSASVF*AYVSQG
Trigger: GCCCTGGGAAACATAGGCTCAGAAGACCGAAGCACT...CATAGCCCCTAACAGGTACAGGAGACACAAGCGGGGAACCACTACACTTAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR GCA 90 bp GTGCTAAGTGTAGTGGTTCCCCGCTTGTGTCTCCTGTACCTGTTAGGGGCTATGAAGTCCAGAGGACTCTaGTGTGTGTGCTTCGGGTGC +
Preference number: 4 (lower is better)
Translates to: VLSVVVPRLCLLYLLGAMKSRGL*CVCFGC
Trigger: GCACCCGAAGCACACACAGCAGAGTCCTCTGGACTT...CATAGCCCCTAACAGGTACAGGAGACACAAGCGGGGAACCACTACACTTAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR GCA 90 bp GGCCCCAGGATCCACCTCTTGCCAGGATGGTGGGCTCTGGCAATGTGTACTCGCATTATCTCAGTGACCTaGTCTAGCCAGTCTTCAAAG +
Preference number: 4 (lower is better)
Translates to: GPRIHLLPGWWALAMCTRIISVT*SSQSSK
Trigger: CTTTGAAGACTGGCTAGAGCAGGTCACTGAGATAAT...GCGAGTACACATTGCCAGAGCCCACCATCCTGGCAAGAGGTGGATCCTGGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR GCA 90 bp AAGTTCCCTGTTAGTGTAAGCTGCCCCTTCCCCTTGTTCAAATGTCCCTGCTGCGCTTCCCTGTCCCTCTaGCCCAGTCAAGTTCCCTGT +
Preference number: 4 (lower is better)
Translates to: KFPVSVSCPFPLFKCPCCASLSL*PSQVPC
Trigger: ACAGGGAACTTGACTGGGGCAGAGGGACAGGGAAGC...GCAGCAGGGACATTTGAACAAGGGGAAGGGGCAGCTTACACTAACAGGGAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR CCA 90 bp GTGCTAAGTGTAGTGGTTCCCCGCTTGTGTCTCCTGTACCTGTTAGGGGCTATGGGAGCCACCCTTTCCTaGTATGTGACTGGGCAGAGT +
Preference number: 4 (lower is better)
Translates to: VLSVVVPRLCLLYLLGAMGATLS*YVTGQS
Trigger: ACTCTGCCCAGTCACATACCAGGAAAGGGTGGCTCC...CATAGCCCCTAACAGGTACAGGAGACACAAGCGGGGAACCACTACACTTAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR CCA 90 bp CTGTTAGGGGCTATGGGCCCGGCCCCCACTGAACCAGATGCTATTTGGTCTTGGAGCGCAGCAGGAAAGTaGAGACTTTCTCTCCAATCT +
Preference number: 4 (lower is better)
Translates to: LLGAMGPAPTEPDAIWSWSAAGK*RLSLQS
Trigger: AGATTGGAGAGAAAGTCTCCACTTTCCTGCTGCGCT...CCAAGACCAAATAGCATCTGGTTCAGTGGGGGCCGGGCCCATAGCCCCTAACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR CCA 90 bp GTGCTAAGTGTAGTGGTTCCCCGCTTGTGTCTCCTGTACCTGTTAGGGGCTATGTTGGGATACGTGGCCTaGCCATGGTCTTCTCCCCTA +
Preference number: 4 (lower is better)
Translates to: VLSVVVPRLCLLYLLGAMLGYVA*PWSSPL
Trigger: TAGGGGAGAAGACCATGGCCAGGCCACGTATCCCAA...CATAGCCCCTAACAGGTACAGGAGACACAAGCGGGGAACCACTACACTTAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR TCA 90 bp CTGTTAGGGGCTATGGGCCCGGCCCCCACTGAACCAGATGCTATTTGGTCTTGGCCACTTTCTATGGACTaGTCTAATACTAGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: LLGAMGPAPTEPDAIWSWPLSMD*SNTRAA
Trigger: TGCTGCCCTAGTATTAGATCAGTCCATAGAAAGTGG...CCAAGACCAAATAGCATCTGGTTCAGTGGGGGCCGGGCCCATAGCCCCTAACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR TCA 90 bp AAGTTCCCTGTTAGTGTAAGCTGCCCCTTCCCCTTGTTCAAATGTCCCTGCTGCAGTGCTTCGGTCTTCTaGGCCTATGTTTCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: KFPVSVSCPFPLFKCPCCSASVF*AYVSQG
Trigger: GCCCTGGGAAACATAGGCTCAGAAGACCGAAGCACT...GCAGCAGGGACATTTGAACAAGGGGAAGGGGCAGCTTACACTAACAGGGAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR GCA 90 bp AAGTTCCCTGTTAGTGTAAGCTGCCCCTTCCCCTTGTTCAAATGTCCCTGCTGCGACGAATCATGTCTGTaGTGCGCACTGACAAGGGGC +
Preference number: 4 (lower is better)
Translates to: KFPVSVSCPFPLFKCPCCDESCL*CALTRG
Trigger: GCCCCTTGTCAGTGCGCAGCACAGACATGATTCGTC...GCAGCAGGGACATTTGAACAAGGGGAAGGGGCAGCTTACACTAACAGGGAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR GCA 90 bp AAGTTCCCTGTTAGTGTAAGCTGCCCCTTCCCCTTGTTCAAATGTCCCTGCTGCTGCCAGGGGAAGGAGTaGTTCGGTCTTCTGAGCCTA +
Preference number: 4 (lower is better)
Translates to: KFPVSVSCPFPLFKCPCCCQGKE*FGLLSL
Trigger: TAGGCTCAGAAGACCGAAGCACTCCTTCCCCTGGCA...GCAGCAGGGACATTTGAACAAGGGGAAGGGGCAGCTTACACTAACAGGGAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR GCA 90 bp AAGTTCCCTGTTAGTGTAAGCTGCCCCTTCCCCTTGTTCAAATGTCCCTGCTGCTTCAAATGTCCCTGCTaGCTGCCAGGGGAAGGAGTG +
Preference number: 4 (lower is better)
Translates to: KFPVSVSCPFPLFKCPCCFKCPC*LPGEGV
Trigger: CACTCCTTCCCCTGGCAGGCAGCAGGGACATTTGAA...GCAGCAGGGACATTTGAACAAGGGGAAGGGGCAGCTTACACTAACAGGGAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR GCA 90 bp GTGCTAAGTGTAGTGGTTCCCCGCTTGTGTCTCCTGTACCTGTTAGGGGCTATGCCCTGCCCTATAGACTaGACAGGACAGTCACAGGAT +
Preference number: 4 (lower is better)
Translates to: VLSVVVPRLCLLYLLGAMPCPID*TGQSQD
Trigger: ATCCTGTGACTGTCCTGTGCAGTCTATAGGGCAGGG...CATAGCCCCTAACAGGTACAGGAGACACAAGCGGGGAACCACTACACTTAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR GCA 90 bp GTGCTAAGTGTAGTGGTTCCCCGCTTGTGTCTCCTGTACCTGTTAGGGGCTATGTGGCAGCGCGGATGCTaGAATAACACAGCCACTTCA +
Preference number: 4 (lower is better)
Translates to: VLSVVVPRLCLLYLLGAMWQRGC*NNTATS
Trigger: TGAAGTGGCTGTGTTATTGCAGCATCCGCGCTGCCA...CATAGCCCCTAACAGGTACAGGAGACACAAGCGGGGAACCACTACACTTAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535214.6
CDS-3UTR CCA 90 bp AAGTTCCCTGTTAGTGTAAGCTGCCCCTTCCCCTTGTTCAAATGTCCCTGCTGCGGAGCCACCCTTTCCTaGTATGTGACTGGGCAGAGT +
Preference number: 4 (lower is better)
Translates to: KFPVSVSCPFPLFKCPCCGATLS*YVTGQS
Trigger: ACTCTGCCCAGTCACATACCAGGAAAGGGTGGCTCC...GCAGCAGGGACATTTGAACAAGGGGAAGGGGCAGCTTACACTAACAGGGAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR CCA 90 bp CTGTTAGGGGCTATGGGCCCGGCCCCCACTGAACCAGATGCTATTTGGTCTTGGTTAACTCCAGAAAATTaGGAGGACACCCTCGCTGAT +
Preference number: 4 (lower is better)
Translates to: LLGAMGPAPTEPDAIWSWLTPEN*EDTLAD
Trigger: ATCAGCGAGGGTGTCCTCCCAATTTTCTGGAGTTAA...CCAAGACCAAATAGCATCTGGTTCAGTGGGGGCCGGGCCCATAGCCCCTAACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR CCA 90 bp AAGTTCCCTGTTAGTGTAAGCTGCCCCTTCCCCTTGTTCAAATGTCCCTGCTGCCCTCCCTGTATGGTCTaGGGGCTGCTGTCGCTAAAA +
Preference number: 4 (lower is better)
Translates to: KFPVSVSCPFPLFKCPCCPPCMV*GLLSLK
Trigger: TTTTAGCGACAGCAGCCCCCAGACCATACAGGGAGG...GCAGCAGGGACATTTGAACAAGGGGAAGGGGCAGCTTACACTAACAGGGAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR CCA 90 bp AAGTTCCCTGTTAGTGTAAGCTGCCCCTTCCCCTTGTTCAAATGTCCCTGCTGCTACGTGGCCTGGCCATaGTCTTCTCCCCTAGTGCTT +
Preference number: 4 (lower is better)
Translates to: KFPVSVSCPFPLFKCPCCYVAWP*SSPLVL
Trigger: AAGCACTAGGGGAGAAGACCATGGCCAGGCCACGTA...GCAGCAGGGACATTTGAACAAGGGGAAGGGGCAGCTTACACTAACAGGGAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR CCA 90 bp AAGTTCCCTGTTAGTGTAAGCTGCCCCTTCCCCTTGTTCAAATGTCCCTGCTGCTTGGGATACGTGGCCTaGCCATGGTCTTCTCCCCTA +
Preference number: 4 (lower is better)
Translates to: KFPVSVSCPFPLFKCPCCLGYVA*PWSSPL
Trigger: TAGGGGAGAAGACCATGGCCAGGCCACGTATCCCAA...GCAGCAGGGACATTTGAACAAGGGGAAGGGGCAGCTTACACTAACAGGGAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR CCA 90 bp GTGCTAAGTGTAGTGGTTCCCCGCTTGTGTCTCCTGTACCTGTTAGGGGCTATGTCTGGTTTTCAGCCTTaGGATACGTGGCCTGGCCAT +
Preference number: 4 (lower is better)
Translates to: VLSVVVPRLCLLYLLGAMSGFQP*DTWPGH
Trigger: ATGGCCAGGCCACGTATCCCAAGGCTGAAAACCAGA...CATAGCCCCTAACAGGTACAGGAGACACAAGCGGGGAACCACTACACTTAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR CCA 90 bp GTGCTAAGTGTAGTGGTTCCCCGCTTGTGTCTCCTGTACCTGTTAGGGGCTATGCACAGGGTAGATATTTaGGGGTGTCCAGAGGACCAG +
Preference number: 4 (lower is better)
Translates to: VLSVVVPRLCLLYLLGAMHRVDI*GCPEDQ
Trigger: CTGGTCCTCTGGACACCCCCAAATATCTACCCTGTG...CATAGCCCCTAACAGGTACAGGAGACACAAGCGGGGAACCACTACACTTAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR CCA 90 bp GTGCTAAGTGTAGTGGTTCCCCGCTTGTGTCTCCTGTACCTGTTAGGGGCTATGCTCTTGCCAGGATGGTaGGCTCTGGCAATGTGTACT +
Preference number: 4 (lower is better)
Translates to: VLSVVVPRLCLLYLLGAMLLPGW*ALAMCT
Trigger: AGTACACATTGCCAGAGCCCACCATCCTGGCAAGAG...CATAGCCCCTAACAGGTACAGGAGACACAAGCGGGGAACCACTACACTTAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR TCA 90 bp GTGCTAAGTGTAGTGGTTCCCCGCTTGTGTCTCCTGTACCTGTTAGGGGCTATGGATGAGAAAGATGGCTaGGCTCTGCGCAATGCAATG +
Preference number: 4 (lower is better)
Translates to: VLSVVVPRLCLLYLLGAMDEKDG*ALRNAM
Trigger: CATTGCATTGCGCAGAGCTCAGCCATCTTTCTCATC...CATAGCCCCTAACAGGTACAGGAGACACAAGCGGGGAACCACTACACTTAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
CDS-3UTR TCA 90 bp CTGTTAGGGGCTATGGGCCCGGCCCCCACTGAACCAGATGCTATTTGGTCTTGGGCAATCAGCTCAGTTTaGCAGCACTCAAATAACTCT +
Preference number: 4 (lower is better)
Translates to: LLGAMGPAPTEPDAIWSWAISSV*QHSNNS
Trigger: AGAGTTATTTGAGTGCTGTCAAACTGAGCTGATTGC...CCAAGACCAAATAGCATCTGGTTCAGTGGGGGCCGGGCCCATAGCCCCTAACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR TCA 90 bp GTGCTAAGTGTAGTGGTTCCCCGCTTGTGTCTCCTGTACCTGTTAGGGGCTATGGCCTTCACAGTGTCCTaGATTTCCACCTCACTACAC +
Preference number: 4 (lower is better)
Translates to: VLSVVVPRLCLLYLLGAMAFTVS*ISTSLH
Trigger: GTGTAGTGAGGTGGAAATTCAGGACACTGTGAAGGC...CATAGCCCCTAACAGGTACAGGAGACACAAGCGGGGAACCACTACACTTAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR TCA 90 bp AAGTTCCCTGTTAGTGTAAGCTGCCCCTTCCCCTTGTTCAAATGTCCCTGCTGCCATTGTCTTCCCTCCTaGACATTCTCCCTAGGACCC +
Preference number: 4 (lower is better)
Translates to: KFPVSVSCPFPLFKCPCCHCLPS*TFSLGP
Trigger: GGGTCCTAGGGAGAATGTTCAGGAGGGAAGACAATG...GCAGCAGGGACATTTGAACAAGGGGAAGGGGCAGCTTACACTAACAGGGAACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR TCA 90 bp CTGTTAGGGGCTATGGGCCCGGCCCCCACTGAACCAGATGCTATTTGGTCTTGGAGTAGTTCAGTCTACTaGGAAACTCATCATCTGGGT +
Preference number: 4 (lower is better)
Translates to: LLGAMGPAPTEPDAIWSWSSSVY*ETHHLG
Trigger: ACCCAGATGATGAGTTTCTCAGTAGACTGAACTACT...CCAAGACCAAATAGCATCTGGTTCAGTGGGGGCCGGGCCCATAGCCCCTAACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR GCA 90 bp GTGCTAAGTGTAGTGGTTCCCCGCTTGTGTCTCCTGTACCTGTTAGGGGCTATGATAACTCTGAGCCACTaGCACGTAGGAAGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: VLSVVVPRLCLLYLLGAMITLSH*HVGRQK
Trigger: CTTCTGCCTTCCTACGTGGCAGTGGCTCAGAGTTAT...CATAGCCCCTAACAGGTACAGGAGACACAAGCGGGGAACCACTACACTTAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR GCA 90 bp CTGTTAGGGGCTATGGGCCCGGCCCCCACTGAACCAGATGCTATTTGGTCTTGGATTATCTCAGTGACCTaGTCTAGCCAGTCTTCAAAG +
Preference number: 4 (lower is better)
Translates to: LLGAMGPAPTEPDAIWSWIISVT*SSQSSK
Trigger: CTTTGAAGACTGGCTAGAGCAGGTCACTGAGATAAT...CCAAGACCAAATAGCATCTGGTTCAGTGGGGGCCGGGCCCATAGCCCCTAACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR GCA 90 bp AAGTTCCCTGTTAGTGTAAGCTGCCCCTTCCCCTTGTTCAAATGTCCCTGCTGCTGCCTAACAGCCGCCTaGGTTTCACTAATGGGGGTA +
Preference number: 4 (lower is better)
Translates to: KFPVSVSCPFPLFKCPCCCLTAA*VSLMGV
Trigger: TACCCCCATTAGTGAAACGCAGGCGGCTGTTAGGCA...GCAGCAGGGACATTTGAACAAGGGGAAGGGGCAGCTTACACTAACAGGGAACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR GCA 90 bp CTGTTAGGGGCTATGGGCCCGGCCCCCACTGAACCAGATGCTATTTGGTCTTGGACTCTGGAAAGGAGCTaGTCAGATAAAAACACACAC +
Preference number: 4 (lower is better)
Translates to: LLGAMGPAPTEPDAIWSWTLERS*SDKNTH
Trigger: GTGTGTGTTTTTATCTGAGCAGCTCCTTTCCAGAGT...CCAAGACCAAATAGCATCTGGTTCAGTGGGGGCCGGGCCCATAGCCCCTAACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR CCA 90 bp AAGTTCCCTGTTAGTGTAAGCTGCCCCTTCCCCTTGTTCAAATGTCCCTGCTGCGTAGGAAGGCAGAAGTaGTCCCAGGTTTCACACAGC +
Preference number: 4 (lower is better)
Translates to: KFPVSVSCPFPLFKCPCCVGRQK*SQVSHS
Trigger: GCTGTGTGAAACCTGGGACCACTTCTGCCTTCCTAC...GCAGCAGGGACATTTGAACAAGGGGAAGGGGCAGCTTACACTAACAGGGAACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR CCA 90 bp GTGCTAAGTGTAGTGGTTCCCCGCTTGTGTCTCCTGTACCTGTTAGGGGCTATGAACATCCCAGGGCTCTaGCCACATCTGTCATACTTC +
Preference number: 4 (lower is better)
Translates to: VLSVVVPRLCLLYLLGAMNIPGL*PHLSYF
Trigger: GAAGTATGACAGATGTGGCCAGAGCCCTGGGATGTT...CATAGCCCCTAACAGGTACAGGAGACACAAGCGGGGAACCACTACACTTAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR CCA 90 bp AAGTTCCCTGTTAGTGTAAGCTGCCCCTTCCCCTTGTTCAAATGTCCCTGCTGCTCTGGTTTTCAGCCTTaGGATACGTGGCCTGGCCAT +
Preference number: 4 (lower is better)
Translates to: KFPVSVSCPFPLFKCPCCSGFQP*DTWPGH
Trigger: ATGGCCAGGCCACGTATCCCAAGGCTGAAAACCAGA...GCAGCAGGGACATTTGAACAAGGGGAAGGGGCAGCTTACACTAACAGGGAACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR CCA 90 bp AAGTTCCCTGTTAGTGTAAGCTGCCCCTTCCCCTTGTTCAAATGTCCCTGCTGCTGCGCTGGGGTACTCTaGAAAGGAGCTGCTCAGATA +
Preference number: 4 (lower is better)
Translates to: KFPVSVSCPFPLFKCPCCCAGVL*KGAAQI
Trigger: TATCTGAGCAGCTCCTTTCCAGAGTACCCCAGCGCA...GCAGCAGGGACATTTGAACAAGGGGAAGGGGCAGCTTACACTAACAGGGAACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR CCA 90 bp AAGTTCCCTGTTAGTGTAAGCTGCCCCTTCCCCTTGTTCAAATGTCCCTGCTGCCTCTTGCCAGGATGGTaGGCTCTGGCAATGTGTACT +
Preference number: 4 (lower is better)
Translates to: KFPVSVSCPFPLFKCPCCLLPGW*ALAMCT
Trigger: AGTACACATTGCCAGAGCCCACCATCCTGGCAAGAG...GCAGCAGGGACATTTGAACAAGGGGAAGGGGCAGCTTACACTAACAGGGAACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR CCA 90 bp GTGCTAAGTGTAGTGGTTCCCCGCTTGTGTCTCCTGTACCTGTTAGGGGCTATGGACTTCCTCCTGCTGTaGGTTCTTCCTCAAAGTCCA +
Preference number: 4 (lower is better)
Translates to: VLSVVVPRLCLLYLLGAMDFLLL*VLPQSP
Trigger: TGGACTTTGAGGAAGAACCCACAGCAGGAGGAAGTC...CATAGCCCCTAACAGGTACAGGAGACACAAGCGGGGAACCACTACACTTAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR TCA 90 bp AAGTTCCCTGTTAGTGTAAGCTGCCCCTTCCCCTTGTTCAAATGTCCCTGCTGCGATGAGAAAGATGGCTaGGCTCTGCGCAATGCAATG +
Preference number: 4 (lower is better)
Translates to: KFPVSVSCPFPLFKCPCCDEKDG*ALRNAM
Trigger: CATTGCATTGCGCAGAGCTCAGCCATCTTTCTCATC...GCAGCAGGGACATTTGAACAAGGGGAAGGGGCAGCTTACACTAACAGGGAACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
CDS-3UTR TCA 90 bp AAGTTCCCTGTTAGTGTAAGCTGCCCCTTCCCCTTGTTCAAATGTCCCTGCTGCGCCTTCACAGTGTCCTaGATTTCCACCTCACTACAC +
Preference number: 4 (lower is better)
Translates to: KFPVSVSCPFPLFKCPCCAFTVS*ISTSLH
Trigger: GTGTAGTGAGGTGGAAATTCAGGACACTGTGAAGGC...GCAGCAGGGACATTTGAACAAGGGGAAGGGGCAGCTTACACTAACAGGGAACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR TCA 90 bp GTGCTAAGTGTAGTGGTTCCCCGCTTGTGTCTCCTGTACCTGTTAGGGGCTATGTGTCAGCCAGTTCAATaGAGACTGCCTTGGCATTGT +
Preference number: 4 (lower is better)
Translates to: VLSVVVPRLCLLYLLGAMCQPVQ*RLPWHC
Trigger: ACAATGCCAAGGCAGTCTTCATTGAACTGGCTGACA...CATAGCCCCTAACAGGTACAGGAGACACAAGCGGGGAACCACTACACTTAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR TCA 90 bp CTGTTAGGGGCTATGGGCCCGGCCCCCACTGAACCAGATGCTATTTGGTCTTGGCTTCTTCATCTCGAATaGGCTTCATTAACTCCAGAA +
Preference number: 4 (lower is better)
Translates to: LLGAMGPAPTEPDAIWSWLLHLE*ASLTPE
Trigger: TTCTGGAGTTAATGAAGCTCATTCGAGATGAAGAAG...CCAAGACCAAATAGCATCTGGTTCAGTGGGGGCCGGGCCCATAGCCCCTAACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR GCA 90 bp AAGTTCCCTGTTAGTGTAAGCTGCCCCTTCCCCTTGTTCAAATGTCCCTGCTGCATAACTCTGAGCCACTaGCACGTAGGAAGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: KFPVSVSCPFPLFKCPCCITLSH*HVGRQK
Trigger: CTTCTGCCTTCCTACGTGGCAGTGGCTCAGAGTTAT...GCAGCAGGGACATTTGAACAAGGGGAAGGGGCAGCTTACACTAACAGGGAACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR CCA 90 bp AAGTTCCCTGTTAGTGTAAGCTGCCCCTTCCCCTTGTTCAAATGTCCCTGCTGCGCAAGAGAGGTAGAGTaGCCCTCTTTCTCAGGAATG +
Preference number: 4 (lower is better)
Translates to: KFPVSVSCPFPLFKCPCCAREVE*PSFSGM
Trigger: CATTCCTGAGAAAGAGGGCCACTCTACCTCTCTTGC...GCAGCAGGGACATTTGAACAAGGGGAAGGGGCAGCTTACACTAACAGGGAACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
CDS-3UTR CCA 90 bp AAGTTCCCTGTTAGTGTAAGCTGCCCCTTCCCCTTGTTCAAATGTCCCTGCTGCGACTTCCTCCTGCTGTaGGTTCTTCCTCAAAGTCCA +
Preference number: 4 (lower is better)
Translates to: KFPVSVSCPFPLFKCPCCDFLLL*VLPQSP
Trigger: TGGACTTTGAGGAAGAACCCACAGCAGGAGGAAGTC...GCAGCAGGGACATTTGAACAAGGGGAAGGGGCAGCTTACACTAACAGGGAACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR TCA 90 bp GTGCTAAGTGTAGTGGTTCCCCGCTTGTGTCTCCTGTACCTGTTAGGGGCTATGCCACTTTCTATGGACTaGTCTAATACTAGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: VLSVVVPRLCLLYLLGAMPLSMD*SNTRAA
Trigger: TGCTGCCCTAGTATTAGATCAGTCCATAGAAAGTGG...CATAGCCCCTAACAGGTACAGGAGACACAAGCGGGGAACCACTACACTTAGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR GCA 90 bp AAGTTCCCTGTTAGTGTAAGCTGCCCCTTCCCCTTGTTCAAATGTCCCTGCTGCCCTGTTAGTGTAAGCTaGCCCTTCCCCTTGTTCAAA +
Preference number: 4 (lower is better)
Translates to: KFPVSVSCPFPLFKCPCCPVSVS*PFPLFK
Trigger: TTTGAACAAGGGGAAGGGGCAGCTTACACTAACAGG...GCAGCAGGGACATTTGAACAAGGGGAAGGGGCAGCTTACACTAACAGGGAACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR CCA 90 bp AAGTTCCCTGTTAGTGTAAGCTGCCCCTTCCCCTTGTTCAAATGTCCCTGCTGCAGCGCAGCAGGAAAGTaGAGACTTTCTCTCCAATCT +
Preference number: 4 (lower is better)
Translates to: KFPVSVSCPFPLFKCPCCSAAGK*RLSLQS
Trigger: AGATTGGAGAGAAAGTCTCCACTTTCCTGCTGCGCT...GCAGCAGGGACATTTGAACAAGGGGAAGGGGCAGCTTACACTAACAGGGAACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR GCA 90 bp GTGCTAAGTGTAGTGGTTCCCCGCTTGTGTCTCCTGTACCTGTTAGGGGCTATGATTATCTCAGTGACCTaGTCTAGCCAGTCTTCAAAG +
Preference number: 4 (lower is better)
Translates to: VLSVVVPRLCLLYLLGAMIISVT*SSQSSK
Trigger: CTTTGAAGACTGGCTAGAGCAGGTCACTGAGATAAT...CATAGCCCCTAACAGGTACAGGAGACACAAGCGGGGAACCACTACACTTAGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR GCA 90 bp GTGCTAAGTGTAGTGGTTCCCCGCTTGTGTCTCCTGTACCTGTTAGGGGCTATGACTTCAGACTCGCTCTaGTTTTCAACTCTATCCAGT +
Preference number: 4 (lower is better)
Translates to: VLSVVVPRLCLLYLLGAMTSDSL*FSTLSS
Trigger: ACTGGATAGAGTTGAAAAGCAGAGCGAGTCTGAAGT...CATAGCCCCTAACAGGTACAGGAGACACAAGCGGGGAACCACTACACTTAGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000535214.6
CDS-3UTR CCA 90 bp AAGTTCCCTGTTAGTGTAAGCTGCCCCTTCCCCTTGTTCAAATGTCCCTGCTGCTTAACTCCAGAAAATTaGGAGGACACCCTCGCTGAT +
Preference number: 4 (lower is better)
Translates to: KFPVSVSCPFPLFKCPCCLTPEN*EDTLAD
Trigger: ATCAGCGAGGGTGTCCTCCCAATTTTCTGGAGTTAA...GCAGCAGGGACATTTGAACAAGGGGAAGGGGCAGCTTACACTAACAGGGAACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR CCA 90 bp AAGTTCCCTGTTAGTGTAAGCTGCCCCTTCCCCTTGTTCAAATGTCCCTGCTGCGAACCAGATGCTATTTaGTCTTGGTTGGTGAAGTCC +
Preference number: 4 (lower is better)
Translates to: KFPVSVSCPFPLFKCPCCEPDAI*SWLVKS
Trigger: GGACTTCACCAACCAAGACCAAATAGCATCTGGTTC...GCAGCAGGGACATTTGAACAAGGGGAAGGGGCAGCTTACACTAACAGGGAACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR TCA 90 bp AAGTTCCCTGTTAGTGTAAGCTGCCCCTTCCCCTTGTTCAAATGTCCCTGCTGCGCAATCAGCTCAGTTTaGCAGCACTCAAATAACTCT +
Preference number: 4 (lower is better)
Translates to: KFPVSVSCPFPLFKCPCCAISSV*QHSNNS
Trigger: AGAGTTATTTGAGTGCTGTCAAACTGAGCTGATTGC...GCAGCAGGGACATTTGAACAAGGGGAAGGGGCAGCTTACACTAACAGGGAACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR TCA 90 bp AAGTTCCCTGTTAGTGTAAGCTGCCCCTTCCCCTTGTTCAAATGTCCCTGCTGCAGTAGTTCAGTCTACTaGGAAACTCATCATCTGGGT +
Preference number: 4 (lower is better)
Translates to: KFPVSVSCPFPLFKCPCCSSSVY*ETHHLG
Trigger: ACCCAGATGATGAGTTTCTCAGTAGACTGAACTACT...GCAGCAGGGACATTTGAACAAGGGGAAGGGGCAGCTTACACTAACAGGGAACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR TCA 90 bp AAGTTCCCTGTTAGTGTAAGCTGCCCCTTCCCCTTGTTCAAATGTCCCTGCTGCCTTCTTCATCTCGAATaGGCTTCATTAACTCCAGAA +
Preference number: 4 (lower is better)
Translates to: KFPVSVSCPFPLFKCPCCLLHLE*ASLTPE
Trigger: TTCTGGAGTTAATGAAGCTCATTCGAGATGAAGAAG...GCAGCAGGGACATTTGAACAAGGGGAAGGGGCAGCTTACACTAACAGGGAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR CAA 90 bp CTGGGGAGCCTCAGGCAGCCCTGCTCCTTCCCGTGTCTGGTTGGTCCTCCTGCATGTGCTTCGGGTGCCTaGCTGGGTTGGCCCTGCTGG +
Preference number: 5 (lower is better)
Translates to: LGSLRQPCSFPCLVGPPACASGA*LGWPCW
Trigger: CCAGCAGGGCCAACCCAGCAAGGCACCCGAAGCACA...TGCAGGAGGACCAACCAGACACGGGAAGGAGCAGGGCTGCCTGAGGCTCCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535214.6
CDS-3UTR CAA 90 bp GGGCTCTGGCAATGTGTACTCGCTTCAGGGAACCCCCTCCTGAGCCCACCCGCTCACTGGCTTCTGCTCTaGCCTGTCTACCGGAGGCCC +
Preference number: 5 (lower is better)
Translates to: GLWQCVLASGNPLLSPPAHWLLL*PVYRRP
Trigger: GGGCCTCCGGTAGACAGGCAAGAGCAGAAGCCAGTG...AGCGGGTGGGCTCAGGAGGGGGTTCCCTGAAGCGAGTACACATTGCCAGAGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS TCA 90 bp CTTCGGGTGCCTGTAGTGAAAAGGCCAACGTCAGGAGGCAGGGCCTaGCACCTGGGGACACTGACGAGCCCTCCAGGCAGAAGAGGGCAG +
Preference number: 5 (lower is better)
Translates to: LRVPVVKRPTSGGRA*HLGTLTSPPGRRGQ
Trigger: CTGCCCTCTTCTGCCTGGAGGGCTCGTCAGTGTCCCCAGGTGTCAGGCCCTGCCTCCTGACGTTGGCCTTTTCACTACAGGCACCCGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361887.5
ENST00000439251.3
CDS CCA 90 bp GCAGAAGAGGGCAGGAGACAGCCTCACTGCTCACTCGGGGCTATGTaGGCTCAGGTCACCCAGCACCCTCCTTGCTGGAGTGAAGGCTGG +
Preference number: 5 (lower is better)
Translates to: AEEGRRQPHCSLGAM*AQVTQHPPCWSEGW
Trigger: CCAGCCTTCACTCCAGCAAGGAGGGTGCTGGGTGACCTGAGCCCACATAGCCCCGAGTGAGCAGTGAGGCTGTCTCCTGCCCTCTTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361887.5
ENST00000439251.3
CDS-3UTR CAA 90 bp GGCCCCAGGATCCACCTCTTGCCAGGATGGTGGGCTCTGGCAATGTGTACTCGCCACTGGCTTCTGCTCTaGCCTGTCTACCGGAGGCCC +
Preference number: 5 (lower is better)
Translates to: GPRIHLLPGWWALAMCTRHWLLL*PVYRRP
Trigger: GGGCCTCCGGTAGACAGGCAAGAGCAGAAGCCAGTG...GCGAGTACACATTGCCAGAGCCCACCATCCTGGCAAGAGGTGGATCCTGGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS CCA 90 bp CTCGTTTCCCAACTCCTCTCCTGCAGCCTGTGGCCCCTCCCTGCCTaGAGTCTGGTTTTCAGCCTTGGGATACGTGGCCTGGCCATGGTC +
Preference number: 5 (lower is better)
Translates to: LVSQLLSCSLWPLPA*SLVFSLGIRGLAMV
Trigger: GACCATGGCCAGGCCACGTATCCCAAGGCTGAAAACCAGACTCCAGGCAGGGAGGGGCCACAGGCTGCAGGAGAGGAGTTGGGAAACGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR CAA 90 bp CTGGGGAGCCTCAGGCAGCCCTGCTCCTTCCCGTGTCTGGTTGGTCCTCCTGCAAGGTGGGGATCTAACTaGGGGCATGACCTCTGCATC +
Preference number: 5 (lower is better)
Translates to: LGSLRQPCSFPCLVGPPARWGSN*GHDLCI
Trigger: GATGCAGAGGTCATGCCCCAAGTTAGATCCCCACCT...TGCAGGAGGACCAACCAGACACGGGAAGGAGCAGGGCTGCCTGAGGCTCCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR CAA 90 bp GGGCTCTGGCAATGTGTACTCGCTTCAGGGAACCCCCTCCTGAGCCCACCCGCTACTGACAAGGGGCTCTaGTGCACGGCTTTCTGCAGC +
Preference number: 5 (lower is better)
Translates to: GLWQCVLASGNPLLSPPATDKGL*CTAFCS
Trigger: GCTGCAGAAAGCCGTGCACAAGAGCCCCTTGTCAGT...AGCGGGTGGGCTCAGGAGGGGGTTCCCTGAAGCGAGTACACATTGCCAGAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR CAA 90 bp GGGCTCTGGCAATGTGTACTCGCTTCAGGGAACCCCCTCCTGAGCCCACCCGCTGTCTGGTTTTCAGCCTaGGGATACGTGGCCTGGCCA +
Preference number: 5 (lower is better)
Translates to: GLWQCVLASGNPLLSPPAVWFSA*GYVAWP
Trigger: TGGCCAGGCCACGTATCCCAAGGCTGAAAACCAGAC...AGCGGGTGGGCTCAGGAGGGGGTTCCCTGAAGCGAGTACACATTGCCAGAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR CAA 90 bp GGGCTCTGGCAATGTGTACTCGCTTCAGGGAACCCCCTCCTGAGCCCACCCGCTTATGTTTCCCAGGGCTaGGGATGGCTCATGGCCCCA +
Preference number: 5 (lower is better)
Translates to: GLWQCVLASGNPLLSPPAYVSQG*GWLMAP
Trigger: TGGGGCCATGAGCCATCCCAAGCCCTGGGAAACATA...AGCGGGTGGGCTCAGGAGGGGGTTCCCTGAAGCGAGTACACATTGCCAGAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR CAA 90 bp CTGGGGAGCCTCAGGCAGCCCTGCTCCTTCCCGTGTCTGGTTGGTCCTCCTGCAGCAGTGTCAGTGCCATaGCTCCCACTTTCTATGGAC +
Preference number: 5 (lower is better)
Translates to: LGSLRQPCSFPCLVGPPAAVSVP*LPLSMD
Trigger: GTCCATAGAAAGTGGGAGCAATGGCACTGACACTGC...TGCAGGAGGACCAACCAGACACGGGAAGGAGCAGGGCTGCCTGAGGCTCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR CAA 90 bp GGCCCCAGGATCCACCTCTTGCCAGGATGGTGGGCTCTGGCAATGTGTACTCGCACTGACAAGGGGCTCTaGTGCACGGCTTTCTGCAGC +
Preference number: 5 (lower is better)
Translates to: GPRIHLLPGWWALAMCTRTDKGL*CTAFCS
Trigger: GCTGCAGAAAGCCGTGCACAAGAGCCCCTTGTCAGT...GCGAGTACACATTGCCAGAGCCCACCATCCTGGCAAGAGGTGGATCCTGGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR CAA 90 bp GGCCCCAGGATCCACCTCTTGCCAGGATGGTGGGCTCTGGCAATGTGTACTCGCGTCTGGTTTTCAGCCTaGGGATACGTGGCCTGGCCA +
Preference number: 5 (lower is better)
Translates to: GPRIHLLPGWWALAMCTRVWFSA*GYVAWP
Trigger: TGGCCAGGCCACGTATCCCAAGGCTGAAAACCAGAC...GCGAGTACACATTGCCAGAGCCCACCATCCTGGCAAGAGGTGGATCCTGGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR CAA 90 bp GGCCCCAGGATCCACCTCTTGCCAGGATGGTGGGCTCTGGCAATGTGTACTCGCTATGTTTCCCAGGGCTaGGGATGGCTCATGGCCCCA +
Preference number: 5 (lower is better)
Translates to: GPRIHLLPGWWALAMCTRYVSQG*GWLMAP
Trigger: TGGGGCCATGAGCCATCCCAAGCCCTGGGAAACATA...GCGAGTACACATTGCCAGAGCCCACCATCCTGGCAAGAGGTGGATCCTGGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR CAA 90 bp CTGGGGAGCCTCAGGCAGCCCTGCTCCTTCCCGTGTCTGGTTGGTCCTCCTGCAGTAGTGGTTCCCCGCTaGTGTCTCCTGTACCTGTTA +
Preference number: 5 (lower is better)
Translates to: LGSLRQPCSFPCLVGPPAVVVPR*CLLYLL
Trigger: TAACAGGTACAGGAGACACAAGCGGGGAACCACTAC...TGCAGGAGGACCAACCAGACACGGGAAGGAGCAGGGCTGCCTGAGGCTCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS CCA 90 bp CCCTCCCTGCCTGGAGTCTGGTTTTCAGCCTTGGGATACGTGGCCTaGCCATGGTCTTCTCCCCTAGTGCTTTCACTGCCTAACAGCCGC +
Preference number: 5 (lower is better)
Translates to: PSLPGVWFSALGYVA*PWSSPLVLSLPNSR
Trigger: GCGGCTGTTAGGCAGTGAAAGCACTAGGGGAGAAGACCATGGCCAGGCCACGTATCCCAAGGCTGAAAACCAGACTCCAGGCAGGGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR CAA 90 bp CTGGGGAGCCTCAGGCAGCCCTGCTCCTTCCCGTGTCTGGTTGGTCCTCCTGCATCAATGAAGACTGCCTaGGCATTGTCTTCCCTCCTG +
Preference number: 5 (lower is better)
Translates to: LGSLRQPCSFPCLVGPPASMKTA*ALSSLL
Trigger: CAGGAGGGAAGACAATGCCAAGGCAGTCTTCATTGA...TGCAGGAGGACCAACCAGACACGGGAAGGAGCAGGGCTGCCTGAGGCTCCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR CAA 90 bp GGCCCCAGGATCCACCTCTTGCCAGGATGGTGGGCTCTGGCAATGTGTACTCGCAGGTGGGGATCTAACTaGGGGCATGACCTCTGCATC +
Preference number: 5 (lower is better)
Translates to: GPRIHLLPGWWALAMCTRRWGSN*GHDLCI
Trigger: GATGCAGAGGTCATGCCCCAAGTTAGATCCCCACCT...GCGAGTACACATTGCCAGAGCCCACCATCCTGGCAAGAGGTGGATCCTGGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR CAA 90 bp GGGCTCTGGCAATGTGTACTCGCTTCAGGGAACCCCCTCCTGAGCCCACCCGCTGAACACCCCACCAAGTaGAGGAAACTGAGTCACGAG +
Preference number: 5 (lower is better)
Translates to: GLWQCVLASGNPLLSPPAEHPTK*RKLSHE
Trigger: CTCGTGACTCAGTTTCCTCAACTTGGTGGGGTGTTC...AGCGGGTGGGCTCAGGAGGGGGTTCCCTGAAGCGAGTACACATTGCCAGAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS CCA 90 bp CTGCCTGGAGTCTGGTTTTCAGCCTTGGGATACGTGGCCTGGCCATaGTCTTCTCCCCTAGTGCTTTCACTGCCTAACAGCCGCCTGCGT +
Preference number: 5 (lower is better)
Translates to: LPGVWFSALGYVAWP*SSPLVLSLPNSRLR
Trigger: ACGCAGGCGGCTGTTAGGCAGTGAAAGCACTAGGGGAGAAGACCATGGCCAGGCCACGTATCCCAAGGCTGAAAACCAGACTCCAGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR CAA 90 bp GGGCTCTGGCAATGTGTACTCGCTTCAGGGAACCCCCTCCTGAGCCCACCCGCTTCAATGAAGACTGCCTaGGCATTGTCTTCCCTCCTG +
Preference number: 5 (lower is better)
Translates to: GLWQCVLASGNPLLSPPASMKTA*ALSSLL
Trigger: CAGGAGGGAAGACAATGCCAAGGCAGTCTTCATTGA...AGCGGGTGGGCTCAGGAGGGGGTTCCCTGAAGCGAGTACACATTGCCAGAGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR CAA 90 bp CTGTTAGGGGCTATGGGCCCGGCCCCCACTGAACCAGATGCTATTTGGTCTTGGACTGACAAGGGGCTCTaGTGCACGGCTTTCTGCAGC +
Preference number: 5 (lower is better)
Translates to: LLGAMGPAPTEPDAIWSWTDKGL*CTAFCS
Trigger: GCTGCAGAAAGCCGTGCACAAGAGCCCCTTGTCAGT...CCAAGACCAAATAGCATCTGGTTCAGTGGGGGCCGGGCCCATAGCCCCTAACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS GCA 90 bp CCTTCCCCTTGTTCAAATGTCCCTGCTGCCTGCCAGGGGAAGGAGTaGTTCGGTCTTCTGAGCCTATGTTTCCCAGGGCTTGGGATGGCT +
Preference number: 5 (lower is better)
Translates to: PSPCSNVPAACQGKE*FGLLSLCFPGLGMA
Trigger: AGCCATCCCAAGCCCTGGGAAACATAGGCTCAGAAGACCGAAGCACTCCTTCCCCTGGCAGGCAGCAGGGACATTTGAACAAGGGGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS GCA 90 bp TGTGCTTCGGGTGCCTTGCTGGGTTGGCCCTGCTGGCAGCGCGGATaGTGCAATAACACAGCCACTTCAGACTCGCTCTGCTTTTCAACT +
Preference number: 5 (lower is better)
Translates to: CASGALLGWPCWQRG*CNNTATSDSLCFST
Trigger: AGTTGAAAAGCAGAGCGAGTCTGAAGTGGCTGTGTTATTGCAGCATCCGCGCTGCCAGCAGGGCCAACCCAGCAAGGCACCCGAAGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535214.6
CDS-3UTR CAA 90 bp CTGTTAGGGGCTATGGGCCCGGCCCCCACTGAACCAGATGCTATTTGGTCTTGGAGGTGGGGATCTAACTaGGGGCATGACCTCTGCATC +
Preference number: 5 (lower is better)
Translates to: LLGAMGPAPTEPDAIWSWRWGSN*GHDLCI
Trigger: GATGCAGAGGTCATGCCCCAAGTTAGATCCCCACCT...CCAAGACCAAATAGCATCTGGTTCAGTGGGGGCCGGGCCCATAGCCCCTAACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR CAA 90 bp CTGTTAGGGGCTATGGGCCCGGCCCCCACTGAACCAGATGCTATTTGGTCTTGGCCACAGGGTAGATATTaGGGGGTGTCCAGAGGACCA +
Preference number: 5 (lower is better)
Translates to: LLGAMGPAPTEPDAIWSWPQGRY*GVSRGP
Trigger: TGGTCCTCTGGACACCCCCAAATATCTACCCTGTGG...CCAAGACCAAATAGCATCTGGTTCAGTGGGGGCCGGGCCCATAGCCCCTAACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS GCA 90 bp ATGTCTGTGCTGCGCACTGACAAGGGGCTCTTGTGCACGGCTTTCTaGAGCAGGGGCTCTAAGCGCAGCAGGAAAGTGGAGACTTTCTCT +
Preference number: 5 (lower is better)
Translates to: MSVLRTDKGLLCTAF*SRGSKRSRKVETFS
Trigger: AGAGAAAGTCTCCACTTTCCTGCTGCGCTTAGAGCCCCTGCTGCAGAAAGCCGTGCACAAGAGCCCCTTGTCAGTGCGCAGCACAGACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS GCA 90 bp TTCAGACGAATCATGTCTGTGCTGCGCACTGACAAGGGGCTCTTGTaGACGGCTTTCTGCAGCAGGGGCTCTAAGCGCAGCAGGAAAGTG +
Preference number: 5 (lower is better)
Translates to: FRRIMSVLRTDKGLL*TAFCSRGSKRSRKV
Trigger: CACTTTCCTGCTGCGCTTAGAGCCCCTGCTGCAGAAAGCCGTGCACAAGAGCCCCTTGTCAGTGCGCAGCACAGACATGATTCGTCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS GCA 90 bp TGGCGACCCGAGCTAAGAGATGTTTCAGACGAATCATGTCTGTGCTaGGCACTGACAAGGGGCTCTTGTGCACGGCTTTCTGCAGCAGGG +
Preference number: 5 (lower is better)
Translates to: WRPELRDVSDESCLC*ALTRGSCARLSAAG
Trigger: CCCTGCTGCAGAAAGCCGTGCACAAGAGCCCCTTGTCAGTGCGCAGCACAGACATGATTCGTCTGAAACATCTCTTAGCTCGGGTCGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR CAA 90 bp AAGTTCCCTGTTAGTGTAAGCTGCCCCTTCCCCTTGTTCAAATGTCCCTGCTGCCACTGGCTTCTGCTCTaGCCTGTCTACCGGAGGCCC +
Preference number: 5 (lower is better)
Translates to: KFPVSVSCPFPLFKCPCCHWLLL*PVYRRP
Trigger: GGGCCTCCGGTAGACAGGCAAGAGCAGAAGCCAGTG...GCAGCAGGGACATTTGAACAAGGGGAAGGGGCAGCTTACACTAACAGGGAACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR CAA 90 bp CTGTTAGGGGCTATGGGCCCGGCCCCCACTGAACCAGATGCTATTTGGTCTTGGGAACACCCCACCAAGTaGAGGAAACTGAGTCACGAG +
Preference number: 5 (lower is better)
Translates to: LLGAMGPAPTEPDAIWSWEHPTK*RKLSHE
Trigger: CTCGTGACTCAGTTTCCTCAACTTGGTGGGGTGTTC...CCAAGACCAAATAGCATCTGGTTCAGTGGGGGCCGGGCCCATAGCCCCTAACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR CAA 90 bp GTGCTAAGTGTAGTGGTTCCCCGCTTGTGTCTCCTGTACCTGTTAGGGGCTATGACTGACAAGGGGCTCTaGTGCACGGCTTTCTGCAGC +
Preference number: 5 (lower is better)
Translates to: VLSVVVPRLCLLYLLGAMTDKGL*CTAFCS
Trigger: GCTGCAGAAAGCCGTGCACAAGAGCCCCTTGTCAGT...CATAGCCCCTAACAGGTACAGGAGACACAAGCGGGGAACCACTACACTTAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR CAA 90 bp GTGCTAAGTGTAGTGGTTCCCCGCTTGTGTCTCCTGTACCTGTTAGGGGCTATGGTCTGGTTTTCAGCCTaGGGATACGTGGCCTGGCCA +
Preference number: 5 (lower is better)
Translates to: VLSVVVPRLCLLYLLGAMVWFSA*GYVAWP
Trigger: TGGCCAGGCCACGTATCCCAAGGCTGAAAACCAGAC...CATAGCCCCTAACAGGTACAGGAGACACAAGCGGGGAACCACTACACTTAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS GCA 90 bp TCATGGCGACCCGAGCTAAGAGATGTTTCAGACGAATCATGTCTGTaGTGCGCACTGACAAGGGGCTCTTGTGCACGGCTTTCTGCAGCA +
Preference number: 5 (lower is better)
Translates to: SWRPELRDVSDESCL*CALTRGSCARLSAA
Trigger: TGCTGCAGAAAGCCGTGCACAAGAGCCCCTTGTCAGTGCGCAGCACAGACATGATTCGTCTGAAACATCTCTTAGCTCGGGTCGCCATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR CAA 90 bp AAGTTCCCTGTTAGTGTAAGCTGCCCCTTCCCCTTGTTCAAATGTCCCTGCTGCTATGTTTCCCAGGGCTaGGGATGGCTCATGGCCCCA +
Preference number: 5 (lower is better)
Translates to: KFPVSVSCPFPLFKCPCCYVSQG*GWLMAP
Trigger: TGGGGCCATGAGCCATCCCAAGCCCTGGGAAACATA...GCAGCAGGGACATTTGAACAAGGGGAAGGGGCAGCTTACACTAACAGGGAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR CAA 90 bp CTGTTAGGGGCTATGGGCCCGGCCCCCACTGAACCAGATGCTATTTGGTCTTGGAGATGCTATTTGGTCTaGGTTGGTGAAGTCCCTTCC +
Preference number: 5 (lower is better)
Translates to: LLGAMGPAPTEPDAIWSWRCYLV*VGEVPS
Trigger: GGAAGGGACTTCACCAACCAAGACCAAATAGCATCT...CCAAGACCAAATAGCATCTGGTTCAGTGGGGGCCGGGCCCATAGCCCCTAACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR CAA 90 bp GTGCTAAGTGTAGTGGTTCCCCGCTTGTGTCTCCTGTACCTGTTAGGGGCTATGCCACAGGGTAGATATTaGGGGGTGTCCAGAGGACCA +
Preference number: 5 (lower is better)
Translates to: VLSVVVPRLCLLYLLGAMPQGRY*GVSRGP
Trigger: TGGTCCTCTGGACACCCCCAAATATCTACCCTGTGG...CATAGCCCCTAACAGGTACAGGAGACACAAGCGGGGAACCACTACACTTAGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS TCA 90 bp TTCAGACTCGCTCTGCTTTTCAACTCTATCCAGTTAGGCAGTTCCTaGCTCAGGCGTGATGGGTCCTGCTTCACTGGATCTGCCGGAGGT +
Preference number: 5 (lower is better)
Translates to: FRLALLFNSIQLGSS*LRRDGSCFTGSAGG
Trigger: ACCTCCGGCAGATCCAGTGAAGCAGGACCCATCACGCCTGAGTCAGGAACTGCCTAACTGGATAGAGTTGAAAAGCAGAGCGAGTCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535214.6
CDS-3UTR CAA 90 bp GTGCTAAGTGTAGTGGTTCCCCGCTTGTGTCTCCTGTACCTGTTAGGGGCTATGGCAGTGTCAGTGCCATaGCTCCCACTTTCTATGGAC +
Preference number: 5 (lower is better)
Translates to: VLSVVVPRLCLLYLLGAMAVSVP*LPLSMD
Trigger: GTCCATAGAAAGTGGGAGCAATGGCACTGACACTGC...CATAGCCCCTAACAGGTACAGGAGACACAAGCGGGGAACCACTACACTTAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR CAA 90 bp AAGTTCCCTGTTAGTGTAAGCTGCCCCTTCCCCTTGTTCAAATGTCCCTGCTGCAGGTGGGGATCTAACTaGGGGCATGACCTCTGCATC +
Preference number: 5 (lower is better)
Translates to: KFPVSVSCPFPLFKCPCCRWGSN*GHDLCI
Trigger: GATGCAGAGGTCATGCCCCAAGTTAGATCCCCACCT...GCAGCAGGGACATTTGAACAAGGGGAAGGGGCAGCTTACACTAACAGGGAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR CAA 90 bp GTGCTAAGTGTAGTGGTTCCCCGCTTGTGTCTCCTGTACCTGTTAGGGGCTATGGTAGTGGTTCCCCGCTaGTGTCTCCTGTACCTGTTA +
Preference number: 5 (lower is better)
Translates to: VLSVVVPRLCLLYLLGAMVVVPR*CLLYLL
Trigger: TAACAGGTACAGGAGACACAAGCGGGGAACCACTAC...CATAGCCCCTAACAGGTACAGGAGACACAAGCGGGGAACCACTACACTTAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR CAA 90 bp GTGCTAAGTGTAGTGGTTCCCCGCTTGTGTCTCCTGTACCTGTTAGGGGCTATGGAACACCCCACCAAGTaGAGGAAACTGAGTCACGAG +
Preference number: 5 (lower is better)
Translates to: VLSVVVPRLCLLYLLGAMEHPTK*RKLSHE
Trigger: CTCGTGACTCAGTTTCCTCAACTTGGTGGGGTGTTC...CATAGCCCCTAACAGGTACAGGAGACACAAGCGGGGAACCACTACACTTAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS GCA 90 bp TTCTCCACCTCAGACACTTGCCATATGGGCATTATCTCAGTGACCTaGTCTAGCCAGTCTTCAAAGGTCTCTTCGCCTGGGCTAGGGGAA +
Preference number: 5 (lower is better)
Translates to: FSTSDTCHMGIISVT*SSQSSKVSSPGLGE
Trigger: TTCCCCTAGCCCAGGCGAAGAGACCTTTGAAGACTGGCTAGAGCAGGTCACTGAGATAATGCCCATATGGCAAGTGTCTGAGGTGGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS GCA 90 bp CAGCAATCAGCTCAGTTTGACAGCACTCAAATAACTCTGAGCCACTaGCACGTAGGAAGGCAGAAGTGGTCCCAGGTTTCACACAGCCAC +
Preference number: 5 (lower is better)
Translates to: QQSAQFDSTQITLSH*HVGRQKWSQVSHSH
Trigger: GTGGCTGTGTGAAACCTGGGACCACTTCTGCCTTCCTACGTGGCAGTGGCTCAGAGTTATTTGAGTGCTGTCAAACTGAGCTGATTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS-3UTR CAA 90 bp AAGTTCCCTGTTAGTGTAAGCTGCCCCTTCCCCTTGTTCAAATGTCCCTGCTGCGTAGTGGTTCCCCGCTaGTGTCTCCTGTACCTGTTA +
Preference number: 5 (lower is better)
Translates to: KFPVSVSCPFPLFKCPCCVVVPR*CLLYLL
Trigger: TAACAGGTACAGGAGACACAAGCGGGGAACCACTAC...GCAGCAGGGACATTTGAACAAGGGGAAGGGGCAGCTTACACTAACAGGGAACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS GCA 90 bp CAGCAATCAGCTCAGTTTGACAGCACTCAAATAACTCTGAGCCACTaGCACGTAGGAAGGCAGAAGTGGTCCCAGGTTTCACACAGCTTC +
Preference number: 5 (lower is better)
Translates to: QQSAQFDSTQITLSH*HVGRQKWSQVSHSF
Trigger: GAAGCTGTGTGAAACCTGGGACCACTTCTGCCTTCCTACGTGGCAGTGGCTCAGAGTTATTTGAGTGCTGTCAAACTGAGCTGATTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361887.5
CDS-3UTR CAA 90 bp AAGTTCCCTGTTAGTGTAAGCTGCCCCTTCCCCTTGTTCAAATGTCCCTGCTGCTCAATGAAGACTGCCTaGGCATTGTCTTCCCTCCTG +
Preference number: 5 (lower is better)
Translates to: KFPVSVSCPFPLFKCPCCSMKTA*ALSSLL
Trigger: CAGGAGGGAAGACAATGCCAAGGCAGTCTTCATTGA...GCAGCAGGGACATTTGAACAAGGGGAAGGGGCAGCTTACACTAACAGGGAACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS TCA 72 bp CCTGTAGTGAAAAGGCCAACGTCAGGAGGCAGGGCCTaGCACCTGGGGACACTGACGAGCCCTCCAGGCAGA +
Preference number: 6 (lower is better)
Translates to: PVVKRPTSGGRA*HLGTLTSPPGR
Trigger: TCTGCCTGGAGGGCTCGTCAGTGTCCCCAGGTGTCAGGCCCTGCCTCCTGACGTTGGCCTTTTCACTACAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361887.5
ENST00000439251.3
CDS GCA 72 bp GGTGCCTTGCTGGGTTGGCCCTGCTGGCAGCGCGGATaGTGCAATAACACAGCCACTTCAGACTCGCTCTGC +
Preference number: 6 (lower is better)
Translates to: GALLGWPCWQRG*CNNTATSDSLC
Trigger: GCAGAGCGAGTCTGAAGTGGCTGTGTTATTGCAGCATCCGCGCTGCCAGCAGGGCCAACCCAGCAAGGCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535214.6
CDS GCA 72 bp GCTGTGTGTGCTTCGGGTGCCTTGCTGGGTTGGCCCTaGTGGCAGCGCGGATGCTGCAATAACACAGCCACT +
Preference number: 6 (lower is better)
Translates to: AVCASGALLGWP*WQRGCCNNTAT
Trigger: AGTGGCTGTGTTATTGCAGCATCCGCGCTGCCAGCAGGGCCAACCCAGCAAGGCACCCGAAGCACACACAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535214.6
CDS CCA 72 bp CAACTCCTCTCCTGCAGCCTGTGGCCCCTCCCTGCCTaGAGTCTGGTTTTCAGCCTTGGGATACGTGGCCTG +
Preference number: 6 (lower is better)
Translates to: QLLSCSLWPLPA*SLVFSLGIRGL
Trigger: CAGGCCACGTATCCCAAGGCTGAAAACCAGACTCCAGGCAGGGAGGGGCCACAGGCTGCAGGAGAGGAGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS GCA 72 bp CTGCGCACTGACAAGGGGCTCTTGTGCACGGCTTTCTaGAGCAGGGGCTCTAAGCGCAGCAGGAAAGTGGAG +
Preference number: 6 (lower is better)
Translates to: LRTDKGLLCTAF*SRGSKRSRKVE
Trigger: CTCCACTTTCCTGCTGCGCTTAGAGCCCCTGCTGCAGAAAGCCGTGCACAAGAGCCCCTTGTCAGTGCGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS CCA 72 bp GTGTGTGCTTCGGGTGCCTTGCTGGGTTGGCCCTGCTaGCAGCGCGGATGCTGCAATAACACAGCCACTTCA +
Preference number: 6 (lower is better)
Translates to: VCASGALLGWPC*QRGCCNNTATS
Trigger: TGAAGTGGCTGTGTTATTGCAGCATCCGCGCTGCCAGCAGGGCCAACCCAGCAAGGCACCCGAAGCACACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535214.6
CDS GCA 72 bp ATCATGTCTGTGCTGCGCACTGACAAGGGGCTCTTGTaGACGGCTTTCTGCAGCAGGGGCTCTAAGCGCAGC +
Preference number: 6 (lower is better)
Translates to: IMSVLRTDKGLL*TAFCSRGSKRS
Trigger: GCTGCGCTTAGAGCCCCTGCTGCAGAAAGCCGTGCACAAGAGCCCCTTGTCAGTGCGCAGCACAGACATGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS GCA 72 bp CCTGCTGTGGGTTCTTCCTCAAAGTCCAGAGGACTCTaGTGTGTGTGCTTCGGGTGCTCGGGGCTATGTGGG +
Preference number: 6 (lower is better)
Translates to: PAVGSSSKSRGL*CVCFGCSGLCG
Trigger: CCCACATAGCCCCGAGCACCCGAAGCACACACAGCAGAGTCCTCTGGACTTTGAGGAAGAACCCACAGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452693.5
CDS GCA 72 bp GCCTTGCTGGGTTGGCCCTGCTGGCAGCGCGGATGCTaGAATAACACAGCCACTTCAGACTCGCTCTGCTTT +
Preference number: 6 (lower is better)
Translates to: ALLGWPCWQRGC*NNTATSDSLCF
Trigger: AAAGCAGAGCGAGTCTGAAGTGGCTGTGTTATTGCAGCATCCGCGCTGCCAGCAGGGCCAACCCAGCAAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535214.6
CDS GCA 72 bp CCTGCTGTGGGTTCTTCCTCAAAGTCCAGAGGACTCTaGTGTGTGTGCTTCGGGTGCCTTGCTGGGTTGGCC +
Preference number: 6 (lower is better)
Translates to: PAVGSSSKSRGL*CVCFGCLAGLA
Trigger: GGCCAACCCAGCAAGGCACCCGAAGCACACACAGCAGAGTCCTCTGGACTTTGAGGAAGAACCCACAGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535214.6
CDS CAA 72 bp CGAATCATGTCTGTGCTGCGCACTGACAAGGGGCTCTaGTGCACGGCTTTCTGCAGCAGGGGCTCTAAGCGC +
Preference number: 6 (lower is better)
Translates to: RIMSVLRTDKGL*CTAFCSRGSKR
Trigger: GCGCTTAGAGCCCCTGCTGCAGAAAGCCGTGCACAAGAGCCCCTTGTCAGTGCGCAGCACAGACATGATTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS TCA 72 bp GCGCACAGGGGCTGTAAGCCTGCCTTCACAGTGTCCTaGATTTCCACCTCACTACACTCCATGGGGATGCCT +
Preference number: 6 (lower is better)
Translates to: AHRGCKPAFTVS*ISTSLHSMGMP
Trigger: AGGCATCCCCATGGAGTGTAGTGAGGTGGAAATTCAGGACACTGTGAAGGCAGGCTTACAGCCCCTGTGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS TCA 72 bp CAACTCTATCCAGTTAGGCAGTTCCTGACTCAGGCGTaGTGGGTCCTGCTTCACTGGATCTGCCGGAGGTGC +
Preference number: 6 (lower is better)
Translates to: QLYPVRQFLTQA*WVLLHWICRRC
Trigger: GCACCTCCGGCAGATCCAGTGAAGCAGGACCCATCACGCCTGAGTCAGGAACTGCCTAACTGGATAGAGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535214.6
CDS CCA 72 bp CTTTCTTTCGGAGGCTCTAAAGGTGGGGATCTAACTTaGGGCATGACCTCTGCATCCAGGCTCTCGGCAGGG +
Preference number: 6 (lower is better)
Translates to: LSFGGSKGGDLT*GMTSASRLSAG
Trigger: CCCTGCCGAGAGCCTGGATGCAGAGGTCATGCCCCAAGTTAGATCCCCACCTTTAGAGCCTCCGAAAGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS CCA 72 bp CCTGGAGTCTGGTTTTCAGCCTTGGGATACGTGGCCTaGCCATGGTCTTCTCCCCTAGTGCTTTCACTGCCT +
Preference number: 6 (lower is better)
Translates to: PGVWFSALGYVA*PWSSPLVLSLP
Trigger: AGGCAGTGAAAGCACTAGGGGAGAAGACCATGGCCAGGCCACGTATCCCAAGGCTGAAAACCAGACTCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS CAA 90 bp TGTTTCAGACGAATCATGTCTGTGCTGCGCACTGACAAGGGGCTCTaGTGCACGGCTTTCTGCAGCAGGGGCTCTAAGCGCAGCAGGAAA +
Preference number: 6 (lower is better)
Translates to: CFRRIMSVLRTDKGL*CTAFCSRGSKRSRK
Trigger: TTTCCTGCTGCGCTTAGAGCCCCTGCTGCAGAAAGCCGTGCACAAGAGCCCCTTGTCAGTGCGCAGCACAGACATGATTCGTCTGAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS CCA 72 bp GTCTGGTTTTCAGCCTTGGGATACGTGGCCTGGCCATaGTCTTCTCCCCTAGTGCTTTCACTGCCTAACAGC +
Preference number: 6 (lower is better)
Translates to: VWFSALGYVAWP*SSPLVLSLPNS
Trigger: GCTGTTAGGCAGTGAAAGCACTAGGGGAGAAGACCATGGCCAGGCCACGTATCCCAAGGCTGAAAACCAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS CCA 72 bp ATAACTCTGAGCCACTGCCACGTAGGAAGGCAGAAGTaGTCCCAGGTTTCACACAGCCACTCCCTGCTGACT +
Preference number: 6 (lower is better)
Translates to: ITLSHCHVGRQK*SQVSHSHSLLT
Trigger: AGTCAGCAGGGAGTGGCTGTGTGAAACCTGGGACCACTTCTGCCTTCCTACGTGGCAGTGGCTCAGAGTTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS TCA 72 bp GAGATGTTTCAGACGAATCATGTCTGTGCTGCGCACTaGCAAGGGGCTCTTGTGCACGGCTTTCTGCAGCAG +
Preference number: 6 (lower is better)
Translates to: EMFQTNHVCAAH*QGALVHGFLQQ
Trigger: CTGCTGCAGAAAGCCGTGCACAAGAGCCCCTTGTCAGTGCGCAGCACAGACATGATTCGTCTGAAACATCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS GCA 72 bp TCCAGCAAACGCCGCCTCTTCTCCACCTCAGACACTTaGCATATGGGCATTATCTCAGTGACCTGCTCTAGC +
Preference number: 6 (lower is better)
Translates to: SSKRRLFSTSDT*HMGIISVTCSS
Trigger: GCTAGAGCAGGTCACTGAGATAATGCCCATATGGCAAGTGTCTGAGGTGGAGAAGAGGCGGCGTTTGCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS GCA 72 bp CCCGAGCTAAGAGATGTTTCAGACGAATCATGTCTGTaGTGCGCACTGACAAGGGGCTCTTGTGCACGGCTT +
Preference number: 6 (lower is better)
Translates to: PELRDVSDESCL*CALTRGSCARL
Trigger: AAGCCGTGCACAAGAGCCCCTTGTCAGTGCGCAGCACAGACATGATTCGTCTGAAACATCTCTTAGCTCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS CCA 72 bp CTTTCTGCAGCAGGGGCTCTAAGCGCAGCAGGAAAGTaGAGACTTTCTCTCCAATCTTCGGAGAGGTCTGCA +
Preference number: 6 (lower is better)
Translates to: LSAAGALSAAGK*RLSLQSSERSA
Trigger: TGCAGACCTCTCCGAAGATTGGAGAGAAAGTCTCCACTTTCCTGCTGCGCTTAGAGCCCCTGCTGCAGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS TCA 72 bp AAGAGAGGTAGAGTGGCCCTCTTTCTCAGGAATGCCTaGCGGATGAGAAAGATGGCTGAGCTCTGCGCAATG +
Preference number: 6 (lower is better)
Translates to: KRGRVALFLRNA*RMRKMAELCAM
Trigger: CATTGCGCAGAGCTCAGCCATCTTTCTCATCCGTCAGGCATTCCTGAGAAAGAGGGCCACTCTACCTCTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
CDS GCA 72 bp TGTCCTGAATTTCCACCTCACTACACTCCATGGGGATaGCTACAATCAGCAGGGCCTTTCTGGGGTCCATGT +
Preference number: 6 (lower is better)
Translates to: CPEFPPHYTPWG*LQSAGPFWGPC
Trigger: ACATGGACCCCAGAAAGGCCCTGCTGATTGTAGGCATCCCCATGGAGTGTAGTGAGGTGGAAATTCAGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS CCA 72 bp TCACAGTGTCCTGAATTTCCACCTCACTACACTCCATaGGGATGCCTACAATCAGCAGGGCCTTTCTGGGGT +
Preference number: 6 (lower is better)
Translates to: SQCPEFPPHYTP*GCLQSAGPFWG
Trigger: ACCCCAGAAAGGCCCTGCTGATTGTAGGCATCCCCATGGAGTGTAGTGAGGTGGAAATTCAGGACACTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS TCA 72 bp GCTCTGCTTTTCAACTCTATCCAGTTAGGCAGTTCCTaGCTCAGGCGTGATGGGTCCTGCTTCACTGGATCT +
Preference number: 6 (lower is better)
Translates to: ALLFNSIQLGSS*LRRDGSCFTGS
Trigger: AGATCCAGTGAAGCAGGACCCATCACGCCTGAGTCAGGAACTGCCTAACTGGATAGAGTTGAAAAGCAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535214.6
CDS GCA 72 bp GCTCAGTTTGACAGCACTCAAATAACTCTGAGCCACTaGCACGTAGGAAGGCAGAAGTGGTCCCAGGTTTCA +
Preference number: 6 (lower is better)
Translates to: AQFDSTQITLSH*HVGRQKWSQVS
Trigger: TGAAACCTGGGACCACTTCTGCCTTCCTACGTGGCAGTGGCTCAGAGTTATTTGAGTGCTGTCAAACTGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS GCA 72 bp TCAGACACTTGCCATATGGGCATTATCTCAGTGACCTaGTCTAGCCAGTCTTCAAAGGTCTCTTCGCCTGGG +
Preference number: 6 (lower is better)
Translates to: SDTCHMGIISVT*SSQSSKVSSPG
Trigger: CCCAGGCGAAGAGACCTTTGAAGACTGGCTAGAGCAGGTCACTGAGATAATGCCCATATGGCAAGTGTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS GCA 72 bp GAGCTAAGAGATGTTTCAGACGAATCATGTCTGTGCTaGGCACTGACAAGGGGCTCTTGTGCACGGCTTTCT +
Preference number: 6 (lower is better)
Translates to: ELRDVSDESCLC*ALTRGSCARLS
Trigger: AGAAAGCCGTGCACAAGAGCCCCTTGTCAGTGCGCAGCACAGACATGATTCGTCTGAAACATCTCTTAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS CAA 72 bp ACAGTGTCAGCCAGTTCAATGAAGACTGCCTTGGCATaGTCTTCCCTCCTGAACATTCTCCCTAGGACCCTG +
Preference number: 6 (lower is better)
Translates to: TVSASSMKTALA*SSLLNILPRTL
Trigger: CAGGGTCCTAGGGAGAATGTTCAGGAGGGAAGACAATGCCAAGGCAGTCTTCATTGAACTGGCTGACACTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6
CDS GCA 72 bp AGTGTAATTGACAGTGTCAGCCAGTTCAATGAAGACTaGCTTGGCATTGTCTTCCCTCCTGAACATTCTCCC +
Preference number: 6 (lower is better)
Translates to: SVIDSVSQFNED*LGIVFPPEHSP
Trigger: GGGAGAATGTTCAGGAGGGAAGACAATGCCAAGGCAGTCTTCATTGAACTGGCTGACACTGTCAATTACACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361887.5
ENST00000439251.3
ENST00000452693.5
ENST00000535214.6