Pregenerated sensors for PNLIP (Homo sapiens)

Ensembl gene IDs: ENSG00000175535

Ensembl transcript IDs: ENST00000369221.2

Found 7 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	AATTTGGCATCGCTGGGGTCCAATCGGACTAATTCAGGTGTGCCCTaGAAGCAAGGTTCTGCTGGGTCCAACCCTGTGATGCGTCCAATG	+
Preference number: 5 (lower is better) Translates to: NLASLGSNRTNSGVP*KQGSAGSNPVMRPM Trigger: CATTGGACGCATCACAGGGTTGGACCCAGCAGAACCTTGCTTTCAGGGCACACCTGAATTAGTCCGATTGGACCCCAGCGATGCCAAATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369221.2
CDS TCA 90 bp	ATACCAAATAAATTTAACCATCTGCAAGTCCCCAACATCCACATCTaGGTCAAATTCATTGGAATGAGTACTATCTGGTTTGAGAGTGCC	+
Preference number: 5 (lower is better) Translates to: IPNKFNHLQVPNIHI*VKFIGMSTIWFESA Trigger: GGCACTCTCAAACCAGATAGTACTCATTCCAATGAATTTGACTCAGATGTGGATGTTGGGGACTTGCAGATGGTTAAATTTATTTGGTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369221.2
CDS GCA 72 bp	TGGCATCGCTGGGGTCCAATCGGACTAATTCAGGTGTaGCCTGAAAGCAAGGTTCTGCTGGGTCCAACCCTG	+
Preference number: 6 (lower is better) Translates to: WHRWGPIGLIQV*PESKVLLGPTL Trigger: CAGGGTTGGACCCAGCAGAACCTTGCTTTCAGGGCACACCTGAATTAGTCCGATTGGACCCCAGCGATGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369221.2
CDS TCA 72 bp	TCGCTGGGGTCCAATCGGACTAATTCAGGTGTGCCCTaGAAGCAAGGTTCTGCTGGGTCCAACCCTGTGATG	+
Preference number: 6 (lower is better) Translates to: SLGSNRTNSGVP*KQGSAGSNPVM Trigger: CATCACAGGGTTGGACCCAGCAGAACCTTGCTTTCAGGGCACACCTGAATTAGTCCGATTGGACCCCAGCGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369221.2
CDS CAA 90 bp	ATAATCTTGGATGCTCCCACTCTAGGTAAAGTTGGGTTGATCACATaGTTATACCAAATAAATTTAACCATCTGCAAGTCCCCAACATCC	+
Preference number: 6 (lower is better) Translates to: IILDAPTLGKVGLIT*LYQINLTICKSPTS Trigger: GGATGTTGGGGACTTGCAGATGGTTAAATTTATTTGGTATAACAATGTGATCAACCCAACTTTACCTAGAGTGGGAGCATCCAAGATTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369221.2
CDS CAA 72 bp	GATGCTCCCACTCTAGGTAAAGTTGGGTTGATCACATaGTTATACCAAATAAATTTAACCATCTGCAAGTCC	+
Preference number: 6 (lower is better) Translates to: DAPTLGKVGLIT*LYQINLTICKS Trigger: GGACTTGCAGATGGTTAAATTTATTTGGTATAACAATGTGATCAACCCAACTTTACCTAGAGTGGGAGCATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369221.2
CDS TCA 72 bp	AAATTTAACCATCTGCAAGTCCCCAACATCCACATCTaGGTCAAATTCATTGGAATGAGTACTATCTGGTTT	+
Preference number: 6 (lower is better) Translates to: KFNHLQVPNIHI*VKFIGMSTIWF Trigger: AAACCAGATAGTACTCATTCCAATGAATTTGACTCAGATGTGGATGTTGGGGACTTGCAGATGGTTAAATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369221.2

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