Pregenerated sensors for PMVK (Homo sapiens)
Ensembl gene IDs: ENSG00000163344Ensembl transcript IDs: ENST00000368467.4
Found 62 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ATATGGCAGGGTTTCGCCTTCAAGCACAGCCAAGACACCCTCCTTTaGCCTTGGAGTCTCCTCCTGAAGAGCATGGCTGTCTTCCCCATG | + |
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Preference number: 1 (lower is better) Translates to: IWQGFAFKHSQDTLL*PWSLLLKSMAVFPM Trigger: CATGGGGAAGACAGCCATGCTCTTCAGGAGGAGACTCCAAGGGCAAAGGAGGGTGTCTTGGCTGTGCTTGAAGGCGAAACCCTGCCATAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368467.4 |
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| 3UTR CCA 90 bp | CAGGGTTTCGCCTTCAAGCACAGCCAAGACACCCTCCTTTGCCCTTaGAGTCTCCTCCTGAAGAGCATGGCTGTCTTCCCCATGGAGAAA | + |
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Preference number: 1 (lower is better) Translates to: QGFAFKHSQDTLLCP*SLLLKSMAVFPMEK Trigger: TTTCTCCATGGGGAAGACAGCCATGCTCTTCAGGAGGAGACTCCAAGGGCAAAGGAGGGTGTCTTGGCTGTGCTTGAAGGCGAAACCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368467.4 |
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| 3UTR-3UTR GCA 90 bp | GGGCTGAGAACATCCAGTCAGGATGCAAGGCCACCACAGGCTGAGGGGACTGGCAGAGGTTTCCTGCCTTaGCCAATATCCACCAACCCC | + |
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Preference number: 2 (lower is better) Translates to: GLRTSSQDARPPQAEGTGRGFLP*PISTNP Trigger: GGGGTTGGTGGATATTGGGCAAGGCAGGAAACCTCT...GCCAGTCCCCTCAGCCTGTGGTGGCCTTGCATCCTGACTGGATGTTCTCAGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368467.4 |
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| 3UTR-3UTR GCA 90 bp | CTGAGAACATCCAGTCAGGATGCAAGGCCACCACAGGCTGAGGGGACTGGCACTCAAGACACCCTCCTTTaGCCTTGGAGTCTCCTCCTG | + |
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Preference number: 2 (lower is better) Translates to: LRTSSQDARPPQAEGTGTQDTLL*PWSLLL Trigger: CAGGAGGAGACTCCAAGGGCAAAGGAGGGTGTCTTG...AGTGCCAGTCCCCTCAGCCTGTGGTGGCCTTGCATCCTGACTGGATGTTCTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368467.4 |
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| 3UTR CAA 90 bp | GCAGGGTTTCGCCTTCAAGCACAGCCAAGACACCCTCCTTTGCCCTaGGAGTCTCCTCCTGAAGAGCATGGCTGTCTTCCCCATGGAGAA | + |
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Preference number: 2 (lower is better) Translates to: AGFRLQAQPRHPPLP*ESPPEEHGCLPHGE Trigger: TTCTCCATGGGGAAGACAGCCATGCTCTTCAGGAGGAGACTCCAAGGGCAAAGGAGGGTGTCTTGGCTGTGCTTGAAGGCGAAACCCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368467.4 |
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| 3UTR CAA 90 bp | GATATGGCAGGGTTTCGCCTTCAAGCACAGCCAAGACACCCTCCTTaGCCCTTGGAGTCTCCTCCTGAAGAGCATGGCTGTCTTCCCCAT | + |
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Preference number: 2 (lower is better) Translates to: DMAGFRLQAQPRHPP*PLESPPEEHGCLPH Trigger: ATGGGGAAGACAGCCATGCTCTTCAGGAGGAGACTCCAAGGGCAAAGGAGGGTGTCTTGGCTGTGCTTGAAGGCGAAACCCTGCCATATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368467.4 |
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| 3UTR-3UTR CCA 90 bp | AGTATCCACACTGGGGAGCTCTGGGTTCTTGCCCAGAACAAGGGGCTGAGAACAACCCTCCTTTGCCCTTaGAGTCTCCTCCTGAAGAGC | + |
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Preference number: 2 (lower is better) Translates to: SIHTGELWVLAQNKGLRTTLLCP*SLLLKS Trigger: GCTCTTCAGGAGGAGACTCCAAGGGCAAAGGAGGGT...TGTTCTCAGCCCCTTGTTCTGGGCAAGAACCCAGAGCTCCCCAGTGTGGATACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368467.4 |
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| 3UTR CCA 72 bp | GGCCACCACAGGCTGAGGGGACTGGCACTGGGGATATaGCAGGGTTTCGCCTTCAAGCACAGCCAAGACACC | + |
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Preference number: 3 (lower is better) Translates to: GHHRLRGLALGI*QGFAFKHSQDT Trigger: GGTGTCTTGGCTGTGCTTGAAGGCGAAACCCTGCCATATCCCCAGTGCCAGTCCCCTCAGCCTGTGGTGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368467.4 |
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| 3UTR-3UTR CAA 90 bp | AGGCTGAGGGGACTGGCACTGGGGATATGGCAGGGTTTCGCCTTCAAGCACAGCCACCCTCCTTTGCCCTaGGAGTCTCCTCCTGAAGAG | + |
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Preference number: 3 (lower is better) Translates to: RLRGLALGIWQGFAFKHSHPPLP*ESPPEE Trigger: CTCTTCAGGAGGAGACTCCAAGGGCAAAGGAGGGTG...GCTGTGCTTGAAGGCGAAACCCTGCCATATCCCCAGTGCCAGTCCCCTCAGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368467.4 |
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| 3UTR TCA 72 bp | CTGGGGAGCTCTGGGTTCTTGCCCAGAACAAGGGGCTaGGAACATCCAGTCAGGATGCAAGGCCACCACAGG | + |
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Preference number: 3 (lower is better) Translates to: LGSSGFLPRTRG*EHPVRMQGHHR Trigger: CCTGTGGTGGCCTTGCATCCTGACTGGATGTTCTCAGCCCCTTGTTCTGGGCAAGAACCCAGAGCTCCCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368467.4 |
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| 3UTR GCA 72 bp | GGTTTCGCCTTCAAGCACAGCCAAGACACCCTCCTTTaGCCTTGGAGTCTCCTCCTGAAGAGCATGGCTGTC | + |
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Preference number: 3 (lower is better) Translates to: GFAFKHSQDTLL*PWSLLLKSMAV Trigger: GACAGCCATGCTCTTCAGGAGGAGACTCCAAGGGCAAAGGAGGGTGTCTTGGCTGTGCTTGAAGGCGAAACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368467.4 |
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| 3UTR-3UTR CAA 90 bp | TATCCACACTGGGGAGCTCTGGGTTCTTGCCCAGAACAAGGGGCTGAGAACATCCAGAGGTTTCCTGCCTaGCCCAATATCCACCAACCC | + |
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Preference number: 3 (lower is better) Translates to: YPHWGALGSCPEQGAENIQRFPA*PNIHQP Trigger: GGGTTGGTGGATATTGGGCAAGGCAGGAAACCTCTG...GATGTTCTCAGCCCCTTGTTCTGGGCAAGAACCCAGAGCTCCCCAGTGTGGATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368467.4 |
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| 3UTR CCA 72 bp | TCCAAGAGGTTTATTAGTATCCACACTGGGGAGCTCTaGGTTCTTGCCCAGAACAAGGGGCTGAGAACATCC | + |
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Preference number: 3 (lower is better) Translates to: SKRFISIHTGEL*VLAQNKGLRTS Trigger: GGATGTTCTCAGCCCCTTGTTCTGGGCAAGAACCCAGAGCTCCCCAGTGTGGATACTAATAAACCTCTTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368467.4 |
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| CDS-3UTR TCA 90 bp | GGGCTGAGAACATCCAGTCAGGATGCAAGGCCACCACAGGCTGAGGGGACTGGCAAGGCCACCACAGGCTaGGGGGACTGGCACTGGGGA | + |
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Preference number: 4 (lower is better) Translates to: GLRTSSQDARPPQAEGTGKATTG*GDWHWG Trigger: TCCCCAGTGCCAGTCCCCTCAGCCTGTGGTGGCCTT...GCCAGTCCCCTCAGCCTGTGGTGGCCTTGCATCCTGACTGGATGTTCTCAGCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000368467.4 |
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| CDS-3UTR CCA 90 bp | AAGGGGCTGAGAACATCCAGTCAGGATGCAAGGCCACCACAGGCTGAGGGGACTAGCATCGTCCACCCCTaGCGTGAACACCCAGCCCCG | + |
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Preference number: 4 (lower is better) Translates to: KGLRTSSQDARPPQAEGTSIVHP*REHPAP Trigger: CGGGGCTGGGTGTTCACGCCAGGGGTGGACGATGCT...AGTCCCCTCAGCCTGTGGTGGCCTTGCATCCTGACTGGATGTTCTCAGCCCCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000368467.4 |
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| CDS-3UTR GCA 90 bp | CTGAGAACATCCAGTCAGGATGCAAGGCCACCACAGGCTGAGGGGACTGGCACTGCTCCAAGTCTGCTCTaGAGCGCCTCGGTCACGAAG | + |
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Preference number: 4 (lower is better) Translates to: LRTSSQDARPPQAEGTGTAPSLL*SASVTK Trigger: CTTCGTGACCGAGGCGCTGCAGAGCAGACTTGGAGC...AGTGCCAGTCCCCTCAGCCTGTGGTGGCCTTGCATCCTGACTGGATGTTCTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368467.4 |
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| CDS-3UTR GCA 90 bp | AGGCTGAGGGGACTGGCACTGGGGATATGGCAGGGTTTCGCCTTCAAGCACAGCGGAGCTCTGGGTTCTTaGCCAGAACAAGGGGCTGAG | + |
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Preference number: 4 (lower is better) Translates to: RLRGLALGIWQGFAFKHSGALGS*PEQGAE Trigger: CTCAGCCCCTTGTTCTGGGCAAGAACCCAGAGCTCC...GCTGTGCTTGAAGGCGAAACCCTGCCATATCCCCAGTGCCAGTCCCCTCAGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000368467.4 |
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| CDS-3UTR TCA 90 bp | TCCAAGAGGTTTATTAGTATCCACACTGGGGAGCTCTGGGTTCTTGCCCAGAACCGTCCACCCCTGGCGTaGACACCCAGCCCCGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: SKRFISIHTGELWVLAQNRPPLA*TPSPAA Trigger: AGCAGCGGGGCTGGGTGTTCACGCCAGGGGTGGACG...GTTCTGGGCAAGAACCCAGAGCTCCCCAGTGTGGATACTAATAAACCTCTTGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000368467.4 |
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| CDS-3UTR GCA 90 bp | AGGCTGAGGGGACTGGCACTGGGGATATGGCAGGGTTTCGCCTTCAAGCACAGCAGATGGGCTGGGAGATaGCCTCCACAATCTTCCTGC | + |
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Preference number: 4 (lower is better) Translates to: RLRGLALGIWQGFAFKHSRWAGR*PPQSSC Trigger: GCAGGAAGATTGTGGAGGGCATCTCCCAGCCCATCT...GCTGTGCTTGAAGGCGAAACCCTGCCATATCCCCAGTGCCAGTCCCCTCAGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368467.4 |
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| CDS-3UTR GCA 90 bp | TATCCACACTGGGGAGCTCTGGGTTCTTGCCCAGAACAAGGGGCTGAGAACATCCGCTGCTGTCGGCTCTaGTCCAACGCTACAACGCGG | + |
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Preference number: 4 (lower is better) Translates to: YPHWGALGSCPEQGAENIRCCRL*SNATTR Trigger: CCGCGTTGTAGCGTTGGAGCAGAGCCGACAGCAGCG...GATGTTCTCAGCCCCTTGTTCTGGGCAAGAACCCAGAGCTCCCCAGTGTGGATA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368467.4 |
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| CDS-3UTR GCA 90 bp | TATCCACACTGGGGAGCTCTGGGTTCTTGCCCAGAACAAGGGGCTGAGAACATCAACACCCAGCCCCGCTaGTGTCGGCTCTGCTCCAAC | + |
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Preference number: 4 (lower is better) Translates to: YPHWGALGSCPEQGAENINTQPR*CRLCSN Trigger: GTTGGAGCAGAGCCGACAGCAGCGGGGCTGGGTGTT...GATGTTCTCAGCCCCTTGTTCTGGGCAAGAACCCAGAGCTCCCCAGTGTGGATA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000368467.4 |
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| CDS-3UTR CCA 90 bp | AGGCTGAGGGGACTGGCACTGGGGATATGGCAGGGTTTCGCCTTCAAGCACAGCCCTGCAAAAGAAGCCTaGGTCAGCCTGGCGTTTCTC | + |
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Preference number: 4 (lower is better) Translates to: RLRGLALGIWQGFAFKHSPAKEA*VSLAFL Trigger: GAGAAACGCCAGGCTGACCCAGGCTTCTTTTGCAGG...GCTGTGCTTGAAGGCGAAACCCTGCCATATCCCCAGTGCCAGTCCCCTCAGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000368467.4 |
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| CDS-3UTR GCA 90 bp | AACAAGGGGCTGAGAACATCCAGTCAGGATGCAAGGCCACCACAGGCTGAGGGGAGGCCTCCTTGTAGGTaGTGGTGTCCAGGAGTCTCT | + |
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Preference number: 4 (lower is better) Translates to: NKGLRTSSQDARPPQAEGRPPCR*WCPGVS Trigger: AGAGACTCCTGGACACCAGCACCTACAAGGAGGCCT...CCCCTCAGCCTGTGGTGGCCTTGCATCCTGACTGGATGTTCTCAGCCCCTTGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368467.4 |
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| CDS-3UTR CCA 90 bp | TATCCACACTGGGGAGCTCTGGGTTCTTGCCCAGAACAAGGGGCTGAGAACATCCACTCACCAGCCAGATaGGCTGGGAGATGCCCTCCA | + |
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Preference number: 4 (lower is better) Translates to: YPHWGALGSCPEQGAENIHSPAR*AGRCPP Trigger: TGGAGGGCATCTCCCAGCCCATCTGGCTGGTGAGTG...GATGTTCTCAGCCCCTTGTTCTGGGCAAGAACCCAGAGCTCCCCAGTGTGGATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368467.4 |
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| CDS-3UTR CCA 90 bp | AAGGGGCTGAGAACATCCAGTCAGGATGCAAGGCCACCACAGGCTGAGGGGACTCACACTGGGGAGCTCTaGGTTCTTGCCCAGAACAAG | + |
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Preference number: 4 (lower is better) Translates to: KGLRTSSQDARPPQAEGTHTGEL*VLAQNK Trigger: CTTGTTCTGGGCAAGAACCCAGAGCTCCCCAGTGTG...AGTCCCCTCAGCCTGTGGTGGCCTTGCATCCTGACTGGATGTTCTCAGCCCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000368467.4 |
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| CDS-3UTR GCA 90 bp | AACAAGGGGCTGAGAACATCCAGTCAGGATGCAAGGCCACCACAGGCTGAGGGGAGAGGTTTCCTGCCTTaGCCAATATCCACCAACCCC | + |
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Preference number: 4 (lower is better) Translates to: NKGLRTSSQDARPPQAEGRGFLP*PISTNP Trigger: GGGGTTGGTGGATATTGGGCAAGGCAGGAAACCTCT...CCCCTCAGCCTGTGGTGGCCTTGCATCCTGACTGGATGTTCTCAGCCCCTTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368467.4 |
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| CDS-3UTR CCA 90 bp | AAGGGGCTGAGAACATCCAGTCAGGATGCAAGGCCACCACAGGCTGAGGGGACTATACTGTTCCTTGAGTaGACCAGAGAGCCGGAGGAC | + |
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Preference number: 4 (lower is better) Translates to: KGLRTSSQDARPPQAEGTILFLE*TREPED Trigger: GTCCTCCGGCTCTCTGGTCCACTCAAGGAACAGTAT...AGTCCCCTCAGCCTGTGGTGGCCTTGCATCCTGACTGGATGTTCTCAGCCCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368467.4 |
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| CDS-3UTR CCA 90 bp | AGTATCCACACTGGGGAGCTCTGGGTTCTTGCCCAGAACAAGGGGCTGAGAACAACCAGCCAGATGGGCTaGGAGATGCCCTCCACAATC | + |
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Preference number: 4 (lower is better) Translates to: SIHTGELWVLAQNKGLRTTSQMG*EMPSTI Trigger: GATTGTGGAGGGCATCTCCCAGCCCATCTGGCTGGT...TGTTCTCAGCCCCTTGTTCTGGGCAAGAACCCAGAGCTCCCCAGTGTGGATACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368467.4 |
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| 3UTR CAA 72 bp | GGGTTTCGCCTTCAAGCACAGCCAAGACACCCTCCTTaGCCCTTGGAGTCTCCTCCTGAAGAGCATGGCTGT | + |
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Preference number: 4 (lower is better) Translates to: GFRLQAQPRHPP*PLESPPEEHGC Trigger: ACAGCCATGCTCTTCAGGAGGAGACTCCAAGGGCAAAGGAGGGTGTCTTGGCTGTGCTTGAAGGCGAAACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368467.4 |
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| CDS-3UTR TCA 90 bp | TCTCCTCCTGAAGAGCATGGCTGTCTTCCCCATGGAGAAAATGAGGTCTCCAGAGTCCAGGCCACATTCTaGCTCAGCATCGTCCACCCC | + |
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Preference number: 4 (lower is better) Translates to: SPPEEHGCLPHGENEVSRVQATF*LSIVHP Trigger: GGGGTGGACGATGCTGAGTCAGAATGTGGCCTGGAC...TCTGGAGACCTCATTTTCTCCATGGGGAAGACAGCCATGCTCTTCAGGAGGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368467.4 |
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| CDS-3UTR TCA 90 bp | AGTATCCACACTGGGGAGCTCTGGGTTCTTGCCCAGAACAAGGGGCTGAGAACACCCAGAACAAGGGGCTaGGAACATCCAGTCAGGATG | + |
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Preference number: 4 (lower is better) Translates to: SIHTGELWVLAQNKGLRTPRTRG*EHPVRM Trigger: CATCCTGACTGGATGTTCTCAGCCCCTTGTTCTGGG...TGTTCTCAGCCCCTTGTTCTGGGCAAGAACCCAGAGCTCCCCAGTGTGGATACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000368467.4 |
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| CDS-3UTR CCA 90 bp | TATCCACACTGGGGAGCTCTGGGTTCTTGCCCAGAACAAGGGGCTGAGAACATCGCCTCCCGAAACCACTaGATGTCAGACACTCTCCGT | + |
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Preference number: 4 (lower is better) Translates to: YPHWGALGSCPEQGAENIASRNH*MSDTLR Trigger: ACGGAGAGTGTCTGACATCCAGTGGTTTCGGGAGGC...GATGTTCTCAGCCCCTTGTTCTGGGCAAGAACCCAGAGCTCCCCAGTGTGGATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368467.4 |
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| CDS-3UTR CCA 90 bp | AAGGGGCTGAGAACATCCAGTCAGGATGCAAGGCCACCACAGGCTGAGGGGACTCGCTGTTCAACTCCATaGTTCTCGATGACCCAGTCA | + |
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Preference number: 4 (lower is better) Translates to: KGLRTSSQDARPPQAEGTRCSTP*FSMTQS Trigger: TGACTGGGTCATCGAGAACCATGGAGTTGAACAGCG...AGTCCCCTCAGCCTGTGGTGGCCTTGCATCCTGACTGGATGTTCTCAGCCCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368467.4 |
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| CDS-3UTR TCA 90 bp | TCTCCTCCTGAAGAGCATGGCTGTCTTCCCCATGGAGAAAATGAGGTCTCCAGAATTTCCTCTTGCCGCTaGACAGCAGTACCAGCCGCG | + |
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Preference number: 4 (lower is better) Translates to: SPPEEHGCLPHGENEVSRISSCR*TAVPAA Trigger: CGCGGCTGGTACTGCTGTTCAGCGGCAAGAGGAAAT...TCTGGAGACCTCATTTTCTCCATGGGGAAGACAGCCATGCTCTTCAGGAGGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368467.4 |
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| CDS-3UTR TCA 90 bp | AACAAGGGGCTGAGAACATCCAGTCAGGATGCAAGGCCACCACAGGCTGAGGGGTTCAAGCCATGCTCCTaGGCATACTGTTCCTTGAGT | + |
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Preference number: 4 (lower is better) Translates to: NKGLRTSSQDARPPQAEGFKPCS*AYCSLS Trigger: ACTCAAGGAACAGTATGCTCAGGAGCATGGCTTGAA...CCCCTCAGCCTGTGGTGGCCTTGCATCCTGACTGGATGTTCTCAGCCCCTTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368467.4 |
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| CDS-3UTR TCA 90 bp | TCTCCTCCTGAAGAGCATGGCTGTCTTCCCCATGGAGAAAATGAGGTCTCCAGAGAGCATACTGTTCCTTaGGTGGACCAGAGAGCCGGA | + |
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Preference number: 4 (lower is better) Translates to: SPPEEHGCLPHGENEVSREHTVP*VDQRAG Trigger: TCCGGCTCTCTGGTCCACTCAAGGAACAGTATGCTC...TCTGGAGACCTCATTTTCTCCATGGGGAAGACAGCCATGCTCTTCAGGAGGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368467.4 |
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| CDS-3UTR TCA 90 bp | TCTCCTCCTGAAGAGCATGGCTGTCTTCCCCATGGAGAAAATGAGGTCTCCAGACTCCATGGTTCTCGATaGCCCAGTCAAAGTCCCCGA | + |
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Preference number: 4 (lower is better) Translates to: SPPEEHGCLPHGENEVSRLHGSR*PSQSPR Trigger: TCGGGGACTTTGACTGGGTCATCGAGAACCATGGAG...TCTGGAGACCTCATTTTCTCCATGGGGAAGACAGCCATGCTCTTCAGGAGGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000368467.4 |
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| CDS-3UTR GCA 90 bp | CTGAAGAGCATGGCTGTCTTCCCCATGGAGAAAATGAGGTCTCCAGAGGTTTCCCAAGACACCCTCCTTTaGCCTTGGAGTCTCCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: LKSMAVFPMEKMRSPEVSQDTLL*PWSLLL Trigger: CAGGAGGAGACTCCAAGGGCAAAGGAGGGTGTCTTG...GGAAACCTCTGGAGACCTCATTTTCTCCATGGGGAAGACAGCCATGCTCTTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368467.4 |
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| CDS-3UTR CCA 90 bp | TGGAGTCTCCTCCTGAAGAGCATGGCTGTCTTCCCCATGGAGAAAATGAGGTCTCTGGCACTGGGGATATaGCAGGGTTTCGCCTTCAAG | + |
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Preference number: 4 (lower is better) Translates to: WSLLLKSMAVFPMEKMRSLALGI*QGFAFK Trigger: CTTGAAGGCGAAACCCTGCCATATCCCCAGTGCCAG...AGACCTCATTTTCTCCATGGGGAAGACAGCCATGCTCTTCAGGAGGAGACTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000368467.4 |
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| CDS-3UTR GCA 90 bp | TCTCCTCCTGAAGAGCATGGCTGTCTTCCCCATGGAGAAAATGAGGTCTCCAGATCTCCAGAGGTTTCCTaGCTTGCCCAATATCCACCA | + |
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Preference number: 4 (lower is better) Translates to: SPPEEHGCLPHGENEVSRSPEVS*LAQYPP Trigger: TGGTGGATATTGGGCAAGGCAGGAAACCTCTGGAGA...TCTGGAGACCTCATTTTCTCCATGGGGAAGACAGCCATGCTCTTCAGGAGGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368467.4 |
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| CDS TCA 90 bp | GCAGCGCCTCGGTCACGAAGTCCTTCCCGGATTTCCTCTTGCCGCTaGACAGCAGTACCAGCCGCGGGGCGCCTCCCAGCGGGGCCATGG | + |
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Preference number: 5 (lower is better) Translates to: AAPRSRSPSRISSCR*TAVPAAGRLPAGPW Trigger: CCATGGCCCCGCTGGGAGGCGCCCCGCGGCTGGTACTGCTGTTCAGCGGCAAGAGGAAATCCGGGAAGGACTTCGTGACCGAGGCGCTGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368467.4 |
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| CDS GCA 90 bp | TCTGACTCAGCATCGTCCACCCCTGGCGTGAACACCCAGCCCCGCTaGTGTCGGCTCTGCTCCAACGCTACAACGCGGACCGTCTGCGTC | + |
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Preference number: 5 (lower is better) Translates to: SDSASSTPGVNTQPR*CRLCSNATTRTVCV Trigger: GACGCAGACGGTCCGCGTTGTAGCGTTGGAGCAGAGCCGACAGCAGCGGGGCTGGGTGTTCACGCCAGGGGTGGACGATGCTGAGTCAGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368467.4 |
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| CDS-3UTR CAA 90 bp | CTGAGAACATCCAGTCAGGATGCAAGGCCACCACAGGCTGAGGGGACTGGCACTCCAAGACACCCTCCTTaGCCCTTGGAGTCTCCTCCT | + |
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Preference number: 5 (lower is better) Translates to: LRTSSQDARPPQAEGTGTPRHPP*PLESPP Trigger: AGGAGGAGACTCCAAGGGCAAAGGAGGGTGTCTTGG...AGTGCCAGTCCCCTCAGCCTGTGGTGGCCTTGCATCCTGACTGGATGTTCTCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368467.4 |
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| CDS GCA 90 bp | CCTCTCCCCAGCGGATCATGTCCTTCCGAAAGGCCTCCTTGTAGGTaGTGGTGTCCAGGAGTCTCTGGAAGTTCAAGCCATGCTCCTGAG | + |
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Preference number: 5 (lower is better) Translates to: PLPSGSCPSERPPCR*WCPGVSGSSSHAPE Trigger: CTCAGGAGCATGGCTTGAACTTCCAGAGACTCCTGGACACCAGCACCTACAAGGAGGCCTTTCGGAAGGACATGATCCGCTGGGGAGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368467.4 |
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| CDS-3UTR CAA 90 bp | CTGAGAACATCCAGTCAGGATGCAAGGCCACCACAGGCTGAGGGGACTGGCACTTTCCCGGATTTCCTCTaGCCGCTGAACAGCAGTACC | + |
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Preference number: 5 (lower is better) Translates to: LRTSSQDARPPQAEGTGTFPDFL*PLNSST Trigger: GGTACTGCTGTTCAGCGGCAAGAGGAAATCCGGGAA...AGTGCCAGTCCCCTCAGCCTGTGGTGGCCTTGCATCCTGACTGGATGTTCTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368467.4 |
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| CDS-3UTR CAA 90 bp | AACAAGGGGCTGAGAACATCCAGTCAGGATGCAAGGCCACCACAGGCTGAGGGGCAGAGGTTTCCTGCCTaGCCCAATATCCACCAACCC | + |
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Preference number: 5 (lower is better) Translates to: NKGLRTSSQDARPPQAEGQRFPA*PNIHQP Trigger: GGGTTGGTGGATATTGGGCAAGGCAGGAAACCTCTG...CCCCTCAGCCTGTGGTGGCCTTGCATCCTGACTGGATGTTCTCAGCCCCTTGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368467.4 |
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| CDS-3UTR CAA 90 bp | AACAAGGGGCTGAGAACATCCAGTCAGGATGCAAGGCCACCACAGGCTGAGGGGTCAAAGTCCCCGAAGTaGTCCAGGCCACATTCTGAC | + |
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Preference number: 5 (lower is better) Translates to: NKGLRTSSQDARPPQAEGSKSPK*SRPHSD Trigger: GTCAGAATGTGGCCTGGACAACTTCGGGGACTTTGA...CCCCTCAGCCTGTGGTGGCCTTGCATCCTGACTGGATGTTCTCAGCCCCTTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000368467.4 |
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| CDS TCA 90 bp | TCTCCAACTGCTCCTCCAGGCGCTGTTCAACTCCATGGTTCTCGATaGCCCAGTCAAAGTCCCCGAAGTTGTCCAGGCCACATTCTGACT | + |
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Preference number: 5 (lower is better) Translates to: SPTAPPGAVQLHGSR*PSQSPRSCPGHILT Trigger: AGTCAGAATGTGGCCTGGACAACTTCGGGGACTTTGACTGGGTCATCGAGAACCATGGAGTTGAACAGCGCCTGGAGGAGCAGTTGGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368467.4 |
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| CDS CCA 90 bp | TCTATCAGGTTCTCCAACTGCTCCTCCAGGCGCTGTTCAACTCCATaGTTCTCGATGACCCAGTCAAAGTCCCCGAAGTTGTCCAGGCCA | + |
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Preference number: 5 (lower is better) Translates to: SIRFSNCSSRRCSTP*FSMTQSKSPKLSRP Trigger: TGGCCTGGACAACTTCGGGGACTTTGACTGGGTCATCGAGAACCATGGAGTTGAACAGCGCCTGGAGGAGCAGTTGGAGAACCTGATAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368467.4 |
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| CDS-3UTR CAA 90 bp | TCCAAGAGGTTTATTAGTATCCACACTGGGGAGCTCTGGGTTCTTGCCCAGAACCACCCTCCTTTGCCCTaGGAGTCTCCTCCTGAAGAG | + |
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Preference number: 5 (lower is better) Translates to: SKRFISIHTGELWVLAQNHPPLP*ESPPEE Trigger: CTCTTCAGGAGGAGACTCCAAGGGCAAAGGAGGGTG...GTTCTGGGCAAGAACCCAGAGCTCCCCAGTGTGGATACTAATAAACCTCTTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368467.4 |
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| CDS CAA 90 bp | CTGCTCTGCAGCGCCTCGGTCACGAAGTCCTTCCCGGATTTCCTCTaGCCGCTGAACAGCAGTACCAGCCGCGGGGCGCCTCCCAGCGGG | + |
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Preference number: 6 (lower is better) Translates to: LLCSASVTKSFPDFL*PLNSSTSRGAPPSG Trigger: CCCGCTGGGAGGCGCCCCGCGGCTGGTACTGCTGTTCAGCGGCAAGAGGAAATCCGGGAAGGACTTCGTGACCGAGGCGCTGCAGAGCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368467.4 |
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| CDS GCA 72 bp | CCTGGCGTGAACACCCAGCCCCGCTGCTGTCGGCTCTaGTCCAACGCTACAACGCGGACCGTCTGCGTCACG | + |
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Preference number: 6 (lower is better) Translates to: PGVNTQPRCCRL*SNATTRTVCVT Trigger: CGTGACGCAGACGGTCCGCGTTGTAGCGTTGGAGCAGAGCCGACAGCAGCGGGGCTGGGTGTTCACGCCAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368467.4 |
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| CDS TCA 72 bp | CGGTCACGAAGTCCTTCCCGGATTTCCTCTTGCCGCTaGACAGCAGTACCAGCCGCGGGGCGCCTCCCAGCG | + |
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Preference number: 6 (lower is better) Translates to: RSRSPSRISSCR*TAVPAAGRLPA Trigger: CGCTGGGAGGCGCCCCGCGGCTGGTACTGCTGTTCAGCGGCAAGAGGAAATCCGGGAAGGACTTCGTGACCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368467.4 |
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| CDS CAA 72 bp | AGCGCCTCGGTCACGAAGTCCTTCCCGGATTTCCTCTaGCCGCTGAACAGCAGTACCAGCCGCGGGGCGCCT | + |
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Preference number: 6 (lower is better) Translates to: SASVTKSFPDFL*PLNSSTSRGAP Trigger: AGGCGCCCCGCGGCTGGTACTGCTGTTCAGCGGCAAGAGGAAATCCGGGAAGGACTTCGTGACCGAGGCGCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368467.4 |
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| CDS TCA 72 bp | CCAGTCAAAGTCCCCGAAGTTGTCCAGGCCACATTCTaGCTCAGCATCGTCCACCCCTGGCGTGAACACCCA | + |
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Preference number: 6 (lower is better) Translates to: PVKVPEVVQATF*LSIVHPWREHP Trigger: TGGGTGTTCACGCCAGGGGTGGACGATGCTGAGTCAGAATGTGGCCTGGACAACTTCGGGGACTTTGACTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368467.4 |
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| CDS TCA 72 bp | GCTCCTCCAGGCGCTGTTCAACTCCATGGTTCTCGATaGCCCAGTCAAAGTCCCCGAAGTTGTCCAGGCCAC | + |
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Preference number: 6 (lower is better) Translates to: APPGAVQLHGSR*PSQSPRSCPGH Trigger: GTGGCCTGGACAACTTCGGGGACTTTGACTGGGTCATCGAGAACCATGGAGTTGAACAGCGCCTGGAGGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368467.4 |
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| CDS CAA 90 bp | TGTTCAACTCCATGGTTCTCGATGACCCAGTCAAAGTCCCCGAAGTaGTCCAGGCCACATTCTGACTCAGCATCGTCCACCCCTGGCGTG | + |
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Preference number: 6 (lower is better) Translates to: CSTPWFSMTQSKSPK*SRPHSDSASSTPGV Trigger: CACGCCAGGGGTGGACGATGCTGAGTCAGAATGTGGCCTGGACAACTTCGGGGACTTTGACTGGGTCATCGAGAACCATGGAGTTGAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368467.4 |
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| CDS CCA 72 bp | GTTCAAGCCATGCTCCTGAGCATACTGTTCCTTGAGTaGACCAGAGAGCCGGAGGACAGCACAGACATCAGC | + |
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Preference number: 6 (lower is better) Translates to: VQAMLLSILFLE*TREPEDSTDIS Trigger: GCTGATGTCTGTGCTGTCCTCCGGCTCTCTGGTCCACTCAAGGAACAGTATGCTCAGGAGCATGGCTTGAAC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368467.4 |
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| CDS CAA 72 bp | CCATGGTTCTCGATGACCCAGTCAAAGTCCCCGAAGTaGTCCAGGCCACATTCTGACTCAGCATCGTCCACC | + |
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Preference number: 6 (lower is better) Translates to: PWFSMTQSKSPK*SRPHSDSASST Trigger: GGTGGACGATGCTGAGTCAGAATGTGGCCTGGACAACTTCGGGGACTTTGACTGGGTCATCGAGAACCATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368467.4 |
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| CDS TCA 72 bp | GGAAGTTCAAGCCATGCTCCTGAGCATACTGTTCCTTaGGTGGACCAGAGAGCCGGAGGACAGCACAGACAT | + |
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Preference number: 6 (lower is better) Translates to: GSSSHAPEHTVP*VDQRAGGQHRH Trigger: ATGTCTGTGCTGTCCTCCGGCTCTCTGGTCCACTCAAGGAACAGTATGCTCAGGAGCATGGCTTGAACTTCC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368467.4 |
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| CDS CCA 72 bp | TTCTCCAACTGCTCCTCCAGGCGCTGTTCAACTCCATaGTTCTCGATGACCCAGTCAAAGTCCCCGAAGTTG | + |
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Preference number: 6 (lower is better) Translates to: FSNCSSRRCSTP*FSMTQSKSPKL Trigger: CAACTTCGGGGACTTTGACTGGGTCATCGAGAACCATGGAGTTGAACAGCGCCTGGAGGAGCAGTTGGAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368467.4 |
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| CDS GCA 72 bp | AGTCTGGAGCGGATAAATTCTATCAGGTTCTCCAACTaGTCCTCCAGGCGCTGTTCAACTCCATGGTTCTCG | + |
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Preference number: 6 (lower is better) Translates to: SLERINSIRFSN*SSRRCSTPWFS Trigger: CGAGAACCATGGAGTTGAACAGCGCCTGGAGGAGCAGTTGGAGAACCTGATAGAATTTATCCGCTCCAGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368467.4 |
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