RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PLXNA2 (Homo sapiens)

Ensembl gene IDs: ENSG00000076356

Ensembl transcript IDs: ENST00000367033.4, ENST00000460870.1, ENST00000463510.1, ENST00000480053.1, ENST00000483048.1, ENST00000486969.1

Found 730 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCCCAGGGTGCCTGGTTTATGACAGGGATTGATATGAGGCAGGGCTaGCAGGTGTCTGGTCTGGGAGAGGCCCACCTCACCCCACTTCTC +
Preference number: 1 (lower is better)
Translates to: PQGAWFMTGIDMRQG*QVSGLGEAHLTPLL
Trigger: GAGAAGTGGGGTGAGGTGGGCCTCTCCCAGACCAGACACCTGGCAGCCCTGCCTCATATCAATCCCTGTCATAAACCAGGCACCCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR TCA 90 bp CTGGCCACCAAGGTCCTGACACTCACAGAGCGCCTTTCCTCTCGATaGCTCCCACTGGCTTCTATGGGGCCTTTGGACCTGGGCATGGAG +
Preference number: 1 (lower is better)
Translates to: LATKVLTLTERLSSR*LPLASMGPLDLGME
Trigger: CTCCATGCCCAGGTCCAAAGGCCCCATAGAAGCCAGTGGGAGTCATCGAGAGGAAAGGCGCTCTGTGAGTGTCAGGACCTTGGTGGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR CCA 90 bp GGGTGTGGACTTCATTGGTTCTTGGTGGCCCAAAGCGAAGAGGTGTaGAGGAGGAACAGGTGGGCAGCTGGAAAGGGGGCAGGGCCTTAT +
Preference number: 1 (lower is better)
Translates to: GCGLHWFLVAQSEEV*RRNRWAAGKGAGPY
Trigger: ATAAGGCCCTGCCCCCTTTCCAGCTGCCCACCTGTTCCTCCTCCACACCTCTTCGCTTTGGGCCACCAAGAACCAATGAAGTCCACACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR TCA 90 bp GACAGCAAGCTCTGGGGCCTGATCCCCATCACTTGTCCTTCCATCTaGGACTCCCAGTGTGACAGCTTGGACAGGTCCCTCTTCCCAGGA +
Preference number: 1 (lower is better)
Translates to: DSKLWGLIPITCPSI*DSQCDSLDRSLFPG
Trigger: TCCTGGGAAGAGGGACCTGTCCAAGCTGTCACACTGGGAGTCTCAGATGGAAGGACAAGTGATGGGGATCAGGCCCCAGAGCTTGCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR CCA 90 bp GCCCTCTCCTGGGAATCACATGTGGTCAGCAGGGCCTTTGGAAATTaGAACCACTTGGAGGTAAAGCAGGGCACGGAGAAGCTGGAGCCC +
Preference number: 1 (lower is better)
Translates to: ALSWESHVVSRAFGN*NHLEVKQGTEKLEP
Trigger: GGGCTCCAGCTTCTCCGTGCCCTGCTTTACCTCCAAGTGGTTCCAATTTCCAAAGGCCCTGCTGACCACATGTGATTCCCAGGAGAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR GCA 90 bp CCGCATTCAGGCAAGAAACTAGAGCTGGGGAGACCGGGCAACGTCTaGTGTGTGGTTAGACAGCGATCCAAAGCTACACGCCAAGGATGG +
Preference number: 1 (lower is better)
Translates to: PHSGKKLELGRPGNV*CVVRQRSKATRQGW
Trigger: CCATCCTTGGCGTGTAGCTTTGGATCGCTGTCTAACCACACAGCAGACGTTGCCCGGTCTCCCCAGCTCTAGTTTCTTGCCTGAATGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR GCA 90 bp GCGTCGGAAGGCCCTGAAGTTCATCTCCCAAGTTCCCCGTCGATCTaGTCCCACAGCCCTGTGTCTGTGAAGCCACTTTGCATTTTCTCA +
Preference number: 1 (lower is better)
Translates to: ASEGPEVHLPSSPSI*SHSPVSVKPLCIFS
Trigger: TGAGAAAATGCAAAGTGGCTTCACAGACACAGGGCTGTGGGAGCAGATCGACGGGGAACTTGGGAGATGAACTTCAGGGCCTTCCGACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR CCA 90 bp GGCATGCCACAGTCATTTCTACTGAGGAAGTGCTGTAGGCCCAGATaGTCAGGAGCTTCCGTATATGAGCGAAGGGTGGTCTCCCCTCTC +
Preference number: 1 (lower is better)
Translates to: GMPQSFLLRKCCRPR*SGASVYERRVVSPL
Trigger: GAGAGGGGAGACCACCCTTCGCTCATATACGGAAGCTCCTGACCATCTGGGCCTACAGCACTTCCTCAGTAGAAATGACTGTGGCATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR CCA 90 bp CACTCACAGAGCGCCTTTCCTCTCGATGACTCCCACTGGCTTCTATaGGGCCTTTGGACCTGGGCATGGAGCTTTGGTCTCTTTGTTTGG +
Preference number: 1 (lower is better)
Translates to: HSQSAFPLDDSHWLL*GLWTWAWSFGLFVW
Trigger: CCAAACAAAGAGACCAAAGCTCCATGCCCAGGTCCAAAGGCCCCATAGAAGCCAGTGGGAGTCATCGAGAGGAAAGGCGCTCTGTGAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR TCA 90 bp CATTTTTCTCAAAGCATGTTCCTGAGACAAGGCGTCGGAAGGCCCTaGAGTTCATCTCCCAAGTTCCCCGTCGATCTGCTCCCACAGCCC +
Preference number: 1 (lower is better)
Translates to: HFSQSMFLRQGVGRP*SSSPKFPVDLLPQP
Trigger: GGGCTGTGGGAGCAGATCGACGGGGAACTTGGGAGATGAACTTCAGGGCCTTCCGACGCCTTGTCTCAGGAACATGCTTTGAGAAAAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR CCA 90 bp ACCTATGTCTCCAAATCAACTTTCAAATGGAACCTCGTGGAGGCCTaGCCCACACACCTCCAGGCCGTTTCCCCAGGGTGCCTGGTTTAT +
Preference number: 1 (lower is better)
Translates to: TYVSKSTFKWNLVEA*PTHLQAVSPGCLVY
Trigger: ATAAACCAGGCACCCTGGGGAAACGGCCTGGAGGTGTGTGGGCCAGGCCTCCACGAGGTTCCATTTGAAAGTTGATTTGGAGACATAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR CCA 90 bp CCCTCTTTTTCTCATCCAAAGGGTGTGGACTTCATTGGTTCTTGGTaGCCCAAAGCGAAGAGGTGTGGAGGAGGAACAGGTGGGCAGCTG +
Preference number: 1 (lower is better)
Translates to: PSFSHPKGVDFIGSW*PKAKRCGGGTGGQL
Trigger: CAGCTGCCCACCTGTTCCTCCTCCACACCTCTTCGCTTTGGGCCACCAAGAACCAATGAAGTCCACACCCTTTGGATGAGAAAAAGAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR CCA 90 bp AGATTCCAGTGTGTCAAGAGGAGTGGGTTTGAGCAGGAAAAGTTGTaGGGAAAGGCAGGTGGGCTCCGGCCCCTAGTCTCATGGGATAGA +
Preference number: 1 (lower is better)
Translates to: RFQCVKRSGFEQEKL*GKAGGLRPLVSWDR
Trigger: TCTATCCCATGAGACTAGGGGCCGGAGCCCACCTGCCTTTCCCCACAACTTTTCCTGCTCAAACCCACTCCTCTTGACACACTGGAATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR TCA 90 bp CGACTGCCTTTAACTTCTTGGTGGAGCAAAGCCTGGATGCCAGTCTaGGCAGCCATGCGGCCAGAAAATCTTCACCCAAACAGAGCTCAG +
Preference number: 1 (lower is better)
Translates to: RLPLTSWWSKAWMPV*AAMRPENLHPNRAQ
Trigger: CTGAGCTCTGTTTGGGTGAAGATTTTCTGGCCGCATGGCTGCTCAGACTGGCATCCAGGCTTTGCTCCACCAAGAAGTTAAAGGCAGTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR GCA 90 bp CCTATTTGTTCTGCCCAGGCCATTCTTCGTCCAGCACTCATCCATTaGTTCTGTTTCACGCTCAGCAGGGCCAGGGGTCTTGACTGCTAT +
Preference number: 1 (lower is better)
Translates to: PICSAQAILRPALIH*FCFTLSRARGLDCY
Trigger: ATAGCAGTCAAGACCCCTGGCCCTGCTGAGCGTGAAACAGAAGCAATGGATGAGTGCTGGACGAAGAATGGCCTGGGCAGAACAAATAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR CCA 90 bp GCTGTAGGCCCAGATGGTCAGGAGCTTCCGTATATGAGCGAAGGGTaGTCTCCCCTCTCCAGGCACGAGAGAATGAAAGAAAGAAAGCAT +
Preference number: 1 (lower is better)
Translates to: AVGPDGQELPYMSEG*SPLSRHERMKERKH
Trigger: ATGCTTTCTTTCTTTCATTCTCTCGTGCCTGGAGAGGGGAGACCACCCTTCGCTCATATACGGAAGCTCCTGACCATCTGGGCCTACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR CCA 90 bp AGCGCCTTTCCTCTCGATGACTCCCACTGGCTTCTATGGGGCCTTTaGACCTGGGCATGGAGCTTTGGTCTCTTTGTTTGGAATCTACAC +
Preference number: 1 (lower is better)
Translates to: SAFPLDDSHWLLWGL*TWAWSFGLFVWNLH
Trigger: GTGTAGATTCCAAACAAAGAGACCAAAGCTCCATGCCCAGGTCCAAAGGCCCCATAGAAGCCAGTGGGAGTCATCGAGAGGAAAGGCGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR CCA 90 bp ACTCCCTCTTTTTCTCATCCAAAGGGTGTGGACTTCATTGGTTCTTaGTGGCCCAAAGCGAAGAGGTGTGGAGGAGGAACAGGTGGGCAG +
Preference number: 1 (lower is better)
Translates to: TPSFSHPKGVDFIGS*WPKAKRCGGGTGGQ
Trigger: CTGCCCACCTGTTCCTCCTCCACACCTCTTCGCTTTGGGCCACCAAGAACCAATGAAGTCCACACCCTTTGGATGAGAAAAAGAGGGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR TCA 90 bp GAGAGGCAGAAGGTAGTAACGTGGGCATGCCACAGTCATTTCTACTaGGGAAGTGCTGTAGGCCCAGATGGTCAGGAGCTTCCGTATATG +
Preference number: 1 (lower is better)
Translates to: ERQKVVTWACHSHFY*GSAVGPDGQELPYM
Trigger: CATATACGGAAGCTCCTGACCATCTGGGCCTACAGCACTTCCTCAGTAGAAATGACTGTGGCATGCCCACGTTACTACCTTCTGCCTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR TCA 90 bp CTTCTCTGCTGTGAGAAGAATGAGATGTGGGTGTCCACGAGAGGCTaGGGAATCTCCAGTTTGCTTATTGGGTGGAGGCCCTGTATGCCA +
Preference number: 1 (lower is better)
Translates to: LLCCEKNEMWVSTRG*GISSLLIGWRPCMP
Trigger: TGGCATACAGGGCCTCCACCCAATAAGCAAACTGGAGATTCCTCAGCCTCTCGTGGACACCCACATCTCATTCTTCTCACAGCAGAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR GCA 90 bp GAAGGTAGTAACGTGGGCATGCCACAGTCATTTCTACTGAGGAAGTaGTGTAGGCCCAGATGGTCAGGAGCTTCCGTATATGAGCGAAGG +
Preference number: 1 (lower is better)
Translates to: EGSNVGMPQSFLLRK*CRPRWSGASVYERR
Trigger: CCTTCGCTCATATACGGAAGCTCCTGACCATCTGGGCCTACAGCACTTCCTCAGTAGAAATGACTGTGGCATGCCCACGTTACTACCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR GCA 90 bp GCAACCGGGATGCACCTGGAGATTTATCAGCCAGAAGCTTTCAAATaGTCCCTATTTGTTCTGCCCAGGCCATTCTTCGTCCAGCACTCA +
Preference number: 1 (lower is better)
Translates to: ATGMHLEIYQPEAFK*SLFVLPRPFFVQHS
Trigger: TGAGTGCTGGACGAAGAATGGCCTGGGCAGAACAAATAGGGAGCATTTGAAAGCTTCTGGCTGATAAATCTCCAGGTGCATCCCGGTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR CCA 90 bp CTCGATGACTCCCACTGGCTTCTATGGGGCCTTTGGACCTGGGCATaGAGCTTTGGTCTCTTTGTTTGGAATCTACACTCAGGAGAATTG +
Preference number: 1 (lower is better)
Translates to: LDDSHWLLWGLWTWA*SFGLFVWNLHSGEL
Trigger: CAATTCTCCTGAGTGTAGATTCCAAACAAAGAGACCAAAGCTCCATGCCCAGGTCCAAAGGCCCCATAGAAGCCAGTGGGAGTCATCGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR CCA 90 bp TTTCCTCTCGATGACTCCCACTGGCTTCTATGGGGCCTTTGGACCTaGGCATGGAGCTTTGGTCTCTTTGTTTGGAATCTACACTCAGGA +
Preference number: 1 (lower is better)
Translates to: FPLDDSHWLLWGLWT*AWSFGLFVWNLHSG
Trigger: TCCTGAGTGTAGATTCCAAACAAAGAGACCAAAGCTCCATGCCCAGGTCCAAAGGCCCCATAGAAGCCAGTGGGAGTCATCGAGAGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR CCA 90 bp AGAGAGACTTCCCTCTCTGCCTCCCCCAAGATGAATGGCTTCTTGTaGAGAGGAGCTGTGGCTTTAACACTTCATCCTTACCCAAGGTCA +
Preference number: 1 (lower is better)
Translates to: RETSLSASPKMNGFL*RGAVALTLHPYPRS
Trigger: TGACCTTGGGTAAGGATGAAGTGTTAAAGCCACAGCTCCTCTCCACAAGAAGCCATTCATCTTGGGGGAGGCAGAGAGGGAAGTCTCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR GCA 90 bp ATCCATTGCTTCTGTTTCACGCTCAGCAGGGCCAGGGGTCTTGACTaGTATTTCCTGTCCTCATTTGGTGGAACTGAAGGAAGGTCAGAA +
Preference number: 1 (lower is better)
Translates to: IHCFCFTLSRARGLD*YFLSSFGGTEGRSE
Trigger: TTCTGACCTTCCTTCAGTTCCACCAAATGAGGACAGGAAATAGCAGTCAAGACCCCTGGCCCTGCTGAGCGTGAAACAGAAGCAATGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR CCA 90 bp CTCCCACTGGCTTCTATGGGGCCTTTGGACCTGGGCATGGAGCTTTaGTCTCTTTGTTTGGAATCTACACTCAGGAGAATTGGTTATCCA +
Preference number: 1 (lower is better)
Translates to: LPLASMGPLDLGMEL*SLCLESTLRRIGYP
Trigger: TGGATAACCAATTCTCCTGAGTGTAGATTCCAAACAAAGAGACCAAAGCTCCATGCCCAGGTCCAAAGGCCCCATAGAAGCCAGTGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR CCA 90 bp TCCAGAGCATTGTCTCTTGTGCAGATCAATGAAACGAAGCGAAGCTaGATAGACTTTGGAGAGAGACTTCCCTCTCTGCCTCCCCCAAGA +
Preference number: 1 (lower is better)
Translates to: SRALSLVQINETKRS*IDFGERLPSLPPPR
Trigger: TCTTGGGGGAGGCAGAGAGGGAAGTCTCTCTCCAAAGTCTATCCAGCTTCGCTTCGTTTCATTGATCTGCACAAGAGACAATGCTCTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR TCA 90 bp GGGGTCCTCTTCCTTTTCCAGAGCATTGTCTCTTGTGCAGATCAATaGAACGAAGCGAAGCTGGATAGACTTTGGAGAGAGACTTCCCTC +
Preference number: 1 (lower is better)
Translates to: GVLFLFQSIVSCADQ*NEAKLDRLWRETSL
Trigger: GAGGGAAGTCTCTCTCCAAAGTCTATCCAGCTTCGCTTCGTTTCATTGATCTGCACAAGAGACAATGCTCTGGAAAAGGAAGAGGACCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR TCA 90 bp CTGAGTTATGGAAAGGATGCTACCATTTTTCTCAAAGCATGTTCCTaGGACAAGGCGTCGGAAGGCCCTGAAGTTCATCTCCCAAGTTCC +
Preference number: 1 (lower is better)
Translates to: LSYGKDATIFLKACS*DKASEGPEVHLPSS
Trigger: GGAACTTGGGAGATGAACTTCAGGGCCTTCCGACGCCTTGTCTCAGGAACATGCTTTGAGAAAAATGGTAGCATCCTTTCCATAACTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR CCA 90 bp GAAGTTCCATACTCCTCTGGCTGCCGGGATAATTCCAGGTTTTACTaGCCTCTGTTTTTGCGAAGTGTTTGGTGCATACTTGTGCTCATC +
Preference number: 1 (lower is better)
Translates to: EVPYSSGCRDNSRFY*PLFLRSVWCILVLI
Trigger: GATGAGCACAAGTATGCACCAAACACTTCGCAAAAACAGAGGCCAGTAAAACCTGGAATTATCCCGGCAGCCAGAGGAGTATGGAACTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR GCA 90 bp CTTTGCAATTTGTGCAAAGTTCTGGAAGTTCCATACTCCTCTGGCTaGCGGGATAATTCCAGGTTTTACTGGCCTCTGTTTTTGCGAAGT +
Preference number: 1 (lower is better)
Translates to: LCNLCKVLEVPYSSG*RDNSRFYWPLFLRS
Trigger: ACTTCGCAAAAACAGAGGCCAGTAAAACCTGGAATTATCCCGGCAGCCAGAGGAGTATGGAACTTCCAGAACTTTGCACAAATTGCAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR CCA 90 bp CTATGGGGCCTTTGGACCTGGGCATGGAGCTTTGGTCTCTTTGTTTaGAATCTACACTCAGGAGAATTGGTTATCCATAGTTTTAGGCAT +
Preference number: 1 (lower is better)
Translates to: LWGLWTWAWSFGLFV*NLHSGELVIHSFRH
Trigger: ATGCCTAAAACTATGGATAACCAATTCTCCTGAGTGTAGATTCCAAACAAAGAGACCAAAGCTCCATGCCCAGGTCCAAAGGCCCCATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR TCA 90 bp CGTGTCTCAGGACTTTCCCTAGCACTAGTTAGAAAATACCAAGAGTaGAACTTTATCCCTCATTCATGGGGATCACTGAGCTCCAGATAC +
Preference number: 1 (lower is better)
Translates to: RVSGLSLALVRKYQE*NFIPHSWGSLSSRY
Trigger: GTATCTGGAGCTCAGTGATCCCCATGAATGAGGGATAAAGTTTCACTCTTGGTATTTTCTAACTAGTGCTAGGGAAAGTCCTGAGACACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR CCA 90 bp GGCTTTAACACTTCATCCTTACCCAAGGTCAAAATATCCTCAAATTaGATAACAGGGAGAAGAGAGGCCAACCAACTCCCTCTTTTTCTC +
Preference number: 1 (lower is better)
Translates to: GFNTSSLPKVKISSN*ITGRREANQLPLFL
Trigger: GAGAAAAAGAGGGAGTTGGTTGGCCTCTCTTCTCCCTGTTATCCAATTTGAGGATATTTTGACCTTGGGTAAGGATGAAGTGTTAAAGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR TCA 90 bp CAGATACTAAAACGTCACACTTCAGGGAAACTAGGGAAGAGAGACTaGGTTATGGAAAGGATGCTACCATTTTTCTCAAAGCATGTTCCT +
Preference number: 1 (lower is better)
Translates to: QILKRHTSGKLGKRD*VMERMLPFFSKHVP
Trigger: AGGAACATGCTTTGAGAAAAATGGTAGCATCCTTTCCATAACTCAGTCTCTCTTCCCTAGTTTCCCTGAAGTGTGACGTTTTAGTATCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR CCA 90 bp CATGGAGCTTTGGTCTCTTTGTTTGGAATCTACACTCAGGAGAATTaGTTATCCATAGTTTTAGGCATCATCAGAAGAGACAGAGAAGGA +
Preference number: 1 (lower is better)
Translates to: HGALVSLFGIYTQEN*LSIVLGIIRRDREG
Trigger: TCCTTCTCTGTCTCTTCTGATGATGCCTAAAACTATGGATAACCAATTCTCCTGAGTGTAGATTCCAAACAAAGAGACCAAAGCTCCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR-3UTR TCA 90 bp GACAGCGATCCAAAGCTACACGCCAAGGATGGAAGCCAGACCTCTGCGCTCCCCTGGCCACCAAGGTCCTaGCACTCACAGAGCGCCTTT +
Preference number: 2 (lower is better)
Translates to: DSDPKLHAKDGSQTSALPWPPRS*HSQSAF
Trigger: AAAGGCGCTCTGTGAGTGTCAGGACCTTGGTGGCCA...GGGGAGCGCAGAGGTCTGGCTTCCATCCTTGGCGTGTAGCTTTGGATCGCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR-3UTR CCA 90 bp GACAGCGATCCAAAGCTACACGCCAAGGATGGAAGCCAGACCTCTGCGCTCCCCTCAAATGGAACCTCGTaGAGGCCTGGCCCACACACC +
Preference number: 2 (lower is better)
Translates to: DSDPKLHAKDGSQTSALPSNGTS*RPGPHT
Trigger: GGTGTGTGGGCCAGGCCTCCACGAGGTTCCATTTGA...GGGGAGCGCAGAGGTCTGGCTTCCATCCTTGGCGTGTAGCTTTGGATCGCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR CAA 90 bp CACTTGTCCTCCTACCCCCTGACTCCAGTGCTGCTTGCAGAACAGTaGGAGCTGGCTGCTCGGATCCAAGGTAATGTGGGAGGCCTGGAC +
Preference number: 2 (lower is better)
Translates to: HLSSYPLTPVLLAEQ*ELAARIQGNVGGLD
Trigger: GTCCAGGCCTCCCACATTACCTTGGATCCGAGCAGCCAGCTCCAACTGTTCTGCAAGCAGCACTGGAGTCAGGGGGTAGGAGGACAAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR-3UTR TCA 90 bp TTCTTCGTCCAGCACTCATCCATTGCTTCTGTTTCACGCTCAGCAGGGCCAGGGGCCTGGATGCCAGTCTaGGCAGCCATGCGGCCAGAA +
Preference number: 2 (lower is better)
Translates to: FFVQHSSIASVSRSAGPGAWMPV*AAMRPE
Trigger: TTCTGGCCGCATGGCTGCTCAGACTGGCATCCAGGC...CCCTGGCCCTGCTGAGCGTGAAACAGAAGCAATGGATGAGTGCTGGACGAAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR-3UTR CCA 90 bp GCAGCCAGAAGAGATGGTGGCAGTAGAAACAAGAGCAGCTCTCATCGCTGGGGGGGGGACAGCAAGCTCTaGGGCCTGATCCCCATCACT +
Preference number: 2 (lower is better)
Translates to: AARRDGGSRNKSSSHRWGGDSKL*GLIPIT
Trigger: AGTGATGGGGATCAGGCCCCAGAGCTTGCTGTCCCC...CCCCCAGCGATGAGAGCTGCTCTTGTTTCTACTGCCACCATCTCTTCTGGCTGC
59% GC, longest homopolymer 9 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR-3UTR TCA 90 bp GACAGCGATCCAAAGCTACACGCCAAGGATGGAAGCCAGACCTCTGCGCTCCCCAGCTGGAACTGGCTATaGCGAAACTTGGCTGGCGTA +
Preference number: 2 (lower is better)
Translates to: DSDPKLHAKDGSQTSALPSWNWL*RNLAGV
Trigger: TACGCCAGCCAAGTTTCGTCATAGCCAGTTCCAGCT...GGGGAGCGCAGAGGTCTGGCTTCCATCCTTGGCGTGTAGCTTTGGATCGCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR-3UTR TCA 90 bp CCCACTGGCTTCTATGGGGCCTTTGGACCTGGGCATGGAGCTTTGGTCTCTTTGAGGAGCTTCCGTATATaGGCGAAGGGTGGTCTCCCC +
Preference number: 2 (lower is better)
Translates to: PTGFYGAFGPGHGALVSLRSFRI*AKGGLP
Trigger: GGGGAGACCACCCTTCGCTCATATACGGAAGCTCCT...CAAAGAGACCAAAGCTCCATGCCCAGGTCCAAAGGCCCCATAGAAGCCAGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR CAA 90 bp AGCCCTCTCCTGGGAATCACATGTGGTCAGCAGGGCCTTTGGAAATaGGAACCACTTGGAGGTAAAGCAGGGCACGGAGAAGCTGGAGCC +
Preference number: 2 (lower is better)
Translates to: SPLLGITCGQQGLWK*EPLGGKAGHGEAGA
Trigger: GGCTCCAGCTTCTCCGTGCCCTGCTTTACCTCCAAGTGGTTCCAATTTCCAAAGGCCCTGCTGACCACATGTGATTCCCAGGAGAGGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR CAA 90 bp GGGCTGGTAGAGATGCTACTGAGATGTCCGACTGCCTTTAACTTCTaGGTGGAGCAAAGCCTGGATGCCAGTCTGAGCAGCCATGCGGCC +
Preference number: 2 (lower is better)
Translates to: GLVEMLLRCPTAFNF*VEQSLDASLSSHAA
Trigger: GGCCGCATGGCTGCTCAGACTGGCATCCAGGCTTTGCTCCACCAAGAAGTTAAAGGCAGTCGGACATCTCAGTAGCATCTCTACCAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR-3UTR TCA 90 bp GACAGCGATCCAAAGCTACACGCCAAGGATGGAAGCCAGACCTCTGCGCTCCCCCACAGTCATTTCTACTaGGGAAGTGCTGTAGGCCCA +
Preference number: 2 (lower is better)
Translates to: DSDPKLHAKDGSQTSALPHSHFY*GSAVGP
Trigger: TGGGCCTACAGCACTTCCTCAGTAGAAATGACTGTG...GGGGAGCGCAGAGGTCTGGCTTCCATCCTTGGCGTGTAGCTTTGGATCGCTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR-3UTR GCA 90 bp TCCACGCTCTCCACAAACCTTCAAGGAAACGCCCCAGGGGCAGTGAATCGTCTCGCCGTTTCCCCAGGGTaGCTGGTTTATGACAGGGAT +
Preference number: 2 (lower is better)
Translates to: STLSTNLQGNAPGAVNRLAVSPG*LVYDRD
Trigger: ATCCCTGTCATAAACCAGGCACCCTGGGGAAACGGC...GAGACGATTCACTGCCCCTGGGGCGTTTCCTTGAAGGTTTGTGGAGAGCGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR-3UTR GCA 90 bp GCAGCCAGAAGAGATGGTGGCAGTAGAAACAAGAGCAGCTCTCATCGCTGGGGGGACTCCAGTGCTGCTTaGAGAACAGTTGGAGCTGGC +
Preference number: 2 (lower is better)
Translates to: AARRDGGSRNKSSSHRWGDSSAA*RTVGAG
Trigger: GCCAGCTCCAACTGTTCTGCAAGCAGCACTGGAGTC...CCCCCAGCGATGAGAGCTGCTCTTGTTTCTACTGCCACCATCTCTTCTGGCTGC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR-3UTR CCA 90 bp GCAGCCAGAAGAGATGGTGGCAGTAGAAACAAGAGCAGCTCTCATCGCTGGGGGCTCGATGACTCCCACTaGCTTCTATGGGGCCTTTGG +
Preference number: 2 (lower is better)
Translates to: AARRDGGSRNKSSSHRWGLDDSH*LLWGLW
Trigger: CCAAAGGCCCCATAGAAGCCAGTGGGAGTCATCGAG...CCCCCAGCGATGAGAGCTGCTCTTGTTTCTACTGCCACCATCTCTTCTGGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR CAA 90 bp CCAGCTGGAGGGAGTGCTCTCCATTGCCCATTAGCATCCTCTGTCTaGCCAAGCACCCTTCTGGGGTCCTCTTCCTTTTCCAGAGCATTG +
Preference number: 2 (lower is better)
Translates to: PAGGSALHCPLASSV*PSTLLGSSSFSRAL
Trigger: CAATGCTCTGGAAAAGGAAGAGGACCCCAGAAGGGTGCTTGGCAAGACAGAGGATGCTAATGGGCAATGGAGAGCACTCCCTCCAGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR-3UTR GCA 90 bp GCAGCCAGAAGAGATGGTGGCAGTAGAAACAAGAGCAGCTCTCATCGCTGGGGGGGGAGTGCTCTCCATTaGCCATTAGCATCCTCTGTC +
Preference number: 2 (lower is better)
Translates to: AARRDGGSRNKSSSHRWGGSALH*PLASSV
Trigger: GACAGAGGATGCTAATGGGCAATGGAGAGCACTCCC...CCCCCAGCGATGAGAGCTGCTCTTGTTTCTACTGCCACCATCTCTTCTGGCTGC
56% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR-3UTR CCA 90 bp GTCTTGCCAAGCACCCTTCTGGGGTCCTCTTCCTTTTCCAGAGCATTGTCTCTTCCCCCAGCCCTCTCCTaGGAATCACATGTGGTCAGC +
Preference number: 2 (lower is better)
Translates to: VLPSTLLGSSSFSRALSLPPALS*ESHVVS
Trigger: GCTGACCACATGTGATTCCCAGGAGAGGGCTGGGGG...AAGAGACAATGCTCTGGAAAAGGAAGAGGACCCCAGAAGGGTGCTTGGCAAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR-3UTR CCA 90 bp GCAGCCAGAAGAGATGGTGGCAGTAGAAACAAGAGCAGCTCTCATCGCTGGGGGTGTTGCCTGCTAAGTTaGTGGCAGGAACCAGCTTCC +
Preference number: 2 (lower is better)
Translates to: AARRDGGSRNKSSSHRWGCCLLS*WQEPAS
Trigger: GGAAGCTGGTTCCTGCCACCAACTTAGCAGGCAACA...CCCCCAGCGATGAGAGCTGCTCTTGTTTCTACTGCCACCATCTCTTCTGGCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR CAA 90 bp CGCTCAGCAGGGCCAGGGGTCTTGACTGCTATTTCCTGTCCTCATTaGGTGGAACTGAAGGAAGGTCAGAAGCTCAAGCAGCAGGTGAAG +
Preference number: 2 (lower is better)
Translates to: RSAGPGVLTAISCPH*VELKEGQKLKQQVK
Trigger: CTTCACCTGCTGCTTGAGCTTCTGACCTTCCTTCAGTTCCACCAAATGAGGACAGGAAATAGCAGTCAAGACCCCTGGCCCTGCTGAGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR-3UTR TCA 90 bp GCTCCCTATTTGTTCTGCCCAGGCCATTCTTCGTCCAGCACTCATCCATTGCTTCAGGGCCAGGGGTCTTaGCTGCTATTTCCTGTCCTC +
Preference number: 2 (lower is better)
Translates to: APYLFCPGHSSSSTHPLLQGQGS*LLFPVL
Trigger: GAGGACAGGAAATAGCAGTCAAGACCCCTGGCCCTG...AAGCAATGGATGAGTGCTGGACGAAGAATGGCCTGGGCAGAACAAATAGGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR-3UTR GCA 90 bp GACAGCGATCCAAAGCTACACGCCAAGGATGGAAGCCAGACCTCTGCGCTCCCCACTGGCCTCTGTTTTTaGGAAGTGTTTGGTGCATAC +
Preference number: 2 (lower is better)
Translates to: DSDPKLHAKDGSQTSALPTGLCF*EVFGAY
Trigger: GTATGCACCAAACACTTCGCAAAAACAGAGGCCAGT...GGGGAGCGCAGAGGTCTGGCTTCCATCCTTGGCGTGTAGCTTTGGATCGCTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR-3UTR CCA 90 bp GTTGGTCTGCTTTCTTCCTTTGCTGGACCACTTTTCCTACAAAACTGGTACCCTGCCAGGTGTCTGGTCTaGGAGAGGCCCACCTCACCC +
Preference number: 2 (lower is better)
Translates to: VGLLSSFAGPLFLQNWYPARCLV*ERPTSP
Trigger: GGGTGAGGTGGGCCTCTCCCAGACCAGACACCTGGC...AGGGTACCAGTTTTGTAGGAAAAGTGGTCCAGCAAAGGAAGAAAGCAGACCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR-3UTR TCA 90 bp AAGTTCCATACTCCTCTGGCTGCCGGGATAATTCCAGGTTTTACTGGCCTCTGTCTGAGACTCCCAGTGTaGCAGCTTGGACAGGTCCCT +
Preference number: 2 (lower is better)
Translates to: KFHTPLAAGIIPGFTGLCLRLPV*QLGQVP
Trigger: AGGGACCTGTCCAAGCTGTCACACTGGGAGTCTCAG...ACAGAGGCCAGTAAAACCTGGAATTATCCCGGCAGCCAGAGGAGTATGGAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR-3UTR TCA 90 bp CCTCTGTCTTGCCAAGCACCCTTCTGGGGTCCTCTTCCTTTTCCAGAGCATTGTGCCAGGGTGAGCTCTTaGTGGCTTTGCAATTTGTGC +
Preference number: 2 (lower is better)
Translates to: PLSCQAPFWGPLPFPEHCARVSS*WLCNLC
Trigger: GCACAAATTGCAAAGCCATCAAGAGCTCACCCTGGC...ACAATGCTCTGGAAAAGGAAGAGGACCCCAGAAGGGTGCTTGGCAAGACAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR-3UTR TCA 90 bp GCTCCCTATTTGTTCTGCCCAGGCCATTCTTCGTCCAGCACTCATCCATTGCTTCGCCTTTCCTCTCGATaGCTCCCACTGGCTTCTATG +
Preference number: 2 (lower is better)
Translates to: APYLFCPGHSSSSTHPLLRLSSR*LPLASM
Trigger: CATAGAAGCCAGTGGGAGTCATCGAGAGGAAAGGCG...AAGCAATGGATGAGTGCTGGACGAAGAATGGCCTGGGCAGAACAAATAGGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR-3UTR CCA 90 bp GCAGCCAGAAGAGATGGTGGCAGTAGAAACAAGAGCAGCTCTCATCGCTGGGGGCAGAAGGTAGTAACGTaGGCATGCCACAGTCATTTC +
Preference number: 2 (lower is better)
Translates to: AARRDGGSRNKSSSHRWGQKVVT*ACHSHF
Trigger: GAAATGACTGTGGCATGCCCACGTTACTACCTTCTG...CCCCCAGCGATGAGAGCTGCTCTTGTTTCTACTGCCACCATCTCTTCTGGCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR-3UTR CCA 90 bp TTCTTCGTCCAGCACTCATCCATTGCTTCTGTTTCACGCTCAGCAGGGCCAGGGGGTCAGCAGGGCCTTTaGAAATTGGAACCACTTGGA +
Preference number: 2 (lower is better)
Translates to: FFVQHSSIASVSRSAGPGGQQGL*KLEPLG
Trigger: TCCAAGTGGTTCCAATTTCCAAAGGCCCTGCTGACC...CCCTGGCCCTGCTGAGCGTGAAACAGAAGCAATGGATGAGTGCTGGACGAAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR-3UTR CCA 90 bp CAAGCACCCTTCTGGGGTCCTCTTCCTTTTCCAGAGCATTGTCTCTTGTGCAGACAAAGCGAAGAGGTGTaGAGGAGGAACAGGTGGGCA +
Preference number: 2 (lower is better)
Translates to: QAPFWGPLPFPEHCLLCRQSEEV*RRNRWA
Trigger: TGCCCACCTGTTCCTCCTCCACACCTCTTCGCTTTG...TCTGCACAAGAGACAATGCTCTGGAAAAGGAAGAGGACCCCAGAAGGGTGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR CAA 90 bp TGGGAATCACATGTGGTCAGCAGGGCCTTTGGAAATTGGAACCACTaGGAGGTAAAGCAGGGCACGGAGAAGCTGGAGCCCAGAGTTAAT +
Preference number: 2 (lower is better)
Translates to: WESHVVSRAFGNWNH*EVKQGTEKLEPRVN
Trigger: ATTAACTCTGGGCTCCAGCTTCTCCGTGCCCTGCTTTACCTCCAAGTGGTTCCAATTTCCAAAGGCCCTGCTGACCACATGTGATTCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR CAA 90 bp AACTCCCTCTTTTTCTCATCCAAAGGGTGTGGACTTCATTGGTTCTaGGTGGCCCAAAGCGAAGAGGTGTGGAGGAGGAACAGGTGGGCA +
Preference number: 2 (lower is better)
Translates to: NSLFFSSKGCGLHWF*VAQSEEVWRRNRWA
Trigger: TGCCCACCTGTTCCTCCTCCACACCTCTTCGCTTTGGGCCACCAAGAACCAATGAAGTCCACACCCTTTGGATGAGAAAAAGAGGGAGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR CAA 90 bp TGGAGAGAGACTTCCCTCTCTGCCTCCCCCAAGATGAATGGCTTCTaGTGGAGAGGAGCTGTGGCTTTAACACTTCATCCTTACCCAAGG +
Preference number: 2 (lower is better)
Translates to: WRETSLSASPKMNGF*WRGAVALTLHPYPR
Trigger: CCTTGGGTAAGGATGAAGTGTTAAAGCCACAGCTCCTCTCCACAAGAAGCCATTCATCTTGGGGGAGGCAGAGAGGGAAGTCTCTCTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR CAA 90 bp CTGGTACCCTGTGCCACTAGGGGAGGAGAACTGTTGCCTGCTAAGTaGGTGGCAGGAACCAGCTTCCTGAAGGATATAAATTCGCTGGAA +
Preference number: 2 (lower is better)
Translates to: LVPCATRGGELLPAK*VAGTSFLKDINSLE
Trigger: TTCCAGCGAATTTATATCCTTCAGGAAGCTGGTTCCTGCCACCAACTTAGCAGGCAACAGTTCTCCTCCCCTAGTGGCACAGGGTACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR-3UTR TCA 90 bp CAACCGGGATGCACCTGGAGATTTATCAGCCAGAAGCTTTCAAATGCTCCCTATCTCTGGTGTTCTCACTaGGGATGGACGACGCCCACT +
Preference number: 2 (lower is better)
Translates to: QPGCTWRFISQKLSNAPYLWCSH*GWTTPT
Trigger: AGTGGGCGTCGTCCATCCTCAGTGAGAACACCAGAG...ATAGGGAGCATTTGAAAGCTTCTGGCTGATAAATCTCCAGGTGCATCCCGGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR-3UTR TCA 90 bp GAGAAGTCATCCACTTGTCCTTCACACTCACAAGTCCGTGAGAGGCAGAAAGAGTCCAGTCAGCCAGGGTaGGCTCTTGATGGCTTTGCA +
Preference number: 2 (lower is better)
Translates to: EKSSTCPSHSQVRERQKESSQPG*ALDGFA
Trigger: TGCAAAGCCATCAAGAGCTCACCCTGGCTGACTGGA...CTCTTTCTGCCTCTCACGGACTTGTGAGTGTGAAGGACAAGTGGATGACTTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR-3UTR TCA 90 bp GTTGGTCTGCTTTCTTCCTTTGCTGGACCACTTTTCCTACAAAACTGGTACCCTAAGCACAGAAGCACCTaGCCCCATGCAGAGGACGGG +
Preference number: 2 (lower is better)
Translates to: VGLLSSFAGPLFLQNWYPKHRST*PHAEDG
Trigger: CCCGTCCTCTGCATGGGGTCAGGTGCTTCTGTGCTT...AGGGTACCAGTTTTGTAGGAAAAGTGGTCCAGCAAAGGAAGAAAGCAGACCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR-3UTR CCA 90 bp GCTCCCTATTTGTTCTGCCCAGGCCATTCTTCGTCCAGCACTCATCCATTGCTTCTTCTATGGGGCCTTTaGACCTGGGCATGGAGCTTT +
Preference number: 2 (lower is better)
Translates to: APYLFCPGHSSSSTHPLLLLWGL*TWAWSF
Trigger: AAAGCTCCATGCCCAGGTCCAAAGGCCCCATAGAAG...AAGCAATGGATGAGTGCTGGACGAAGAATGGCCTGGGCAGAACAAATAGGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR-3UTR CCA 90 bp GCTCCCTATTTGTTCTGCCCAGGCCATTCTTCGTCCAGCACTCATCCATTGCTTCAGAACAGTTGGAGCTaGCTGCTCGGATCCAAGGTA +
Preference number: 2 (lower is better)
Translates to: APYLFCPGHSSSSTHPLLQNSWS*LLGSKV
Trigger: TACCTTGGATCCGAGCAGCCAGCTCCAACTGTTCTG...AAGCAATGGATGAGTGCTGGACGAAGAATGGCCTGGGCAGAACAAATAGGGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR-3UTR CCA 90 bp GCAGCCAGAAGAGATGGTGGCAGTAGAAACAAGAGCAGCTCTCATCGCTGGGGGAGGGCCTTTGGAAATTaGAACCACTTGGAGGTAAAG +
Preference number: 2 (lower is better)
Translates to: AARRDGGSRNKSSSHRWGRAFGN*NHLEVK
Trigger: CTTTACCTCCAAGTGGTTCCAATTTCCAAAGGCCCT...CCCCCAGCGATGAGAGCTGCTCTTGTTTCTACTGCCACCATCTCTTCTGGCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR CAA 90 bp CACTCATCCATTGCTTCTGTTTCACGCTCAGCAGGGCCAGGGGTCTaGACTGCTATTTCCTGTCCTCATTTGGTGGAACTGAAGGAAGGT +
Preference number: 2 (lower is better)
Translates to: HSSIASVSRSAGPGV*TAISCPHLVELKEG
Trigger: ACCTTCCTTCAGTTCCACCAAATGAGGACAGGAAATAGCAGTCAAGACCCCTGGCCCTGCTGAGCGTGAAACAGAAGCAATGGATGAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR-3UTR GCA 90 bp GTCTTGCCAAGCACCCTTCTGGGGTCCTCTTCCTTTTCCAGAGCATTGTCTCTTCCATACTCCTCTGGCTaGCGGGATAATTCCAGGTTT +
Preference number: 2 (lower is better)
Translates to: VLPSTLLGSSSFSRALSLPYSSG*RDNSRF
Trigger: AAACCTGGAATTATCCCGGCAGCCAGAGGAGTATGG...AAGAGACAATGCTCTGGAAAAGGAAGAGGACCCCAGAAGGGTGCTTGGCAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR-3UTR GCA 90 bp GCAGCCAGAAGAGATGGTGGCAGTAGAAACAAGAGCAGCTCTCATCGCTGGGGGGAGCATTGTCTCTTGTaGAGATCAATGAAACGAAGC +
Preference number: 2 (lower is better)
Translates to: AARRDGGSRNKSSSHRWGEHCLL*RSMKRS
Trigger: GCTTCGTTTCATTGATCTGCACAAGAGACAATGCTC...CCCCCAGCGATGAGAGCTGCTCTTGTTTCTACTGCCACCATCTCTTCTGGCTGC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR-3UTR CCA 90 bp GGCCTTTGGACCTGGGCATGGAGCTTTGGTCTCTTTGTTTGGAATCTACACTCAATGACGAAACTTGGCTaGCGTAGGGAGAGGAGTCCT +
Preference number: 2 (lower is better)
Translates to: GLWTWAWSFGLFVWNLHSMTKLG*RRERSP
Trigger: AGGACTCCTCTCCCTACGCCAGCCAAGTTTCGTCAT...TGAGTGTAGATTCCAAACAAAGAGACCAAAGCTCCATGCCCAGGTCCAAAGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR-3UTR CCA 90 bp TCCACGCTCTCCACAAACCTTCAAGGAAACGCCCCAGGGGCAGTGAATCGTCTCGAATTAAACAAAAGTTaGACGGGATTAACAGGGCGG +
Preference number: 2 (lower is better)
Translates to: STLSTNLQGNAPGAVNRLELNKS*TGLTGR
Trigger: CCGCCCTGTTAATCCCGTCCAACTTTTGTTTAATTC...GAGACGATTCACTGCCCCTGGGGCGTTTCCTTGAAGGTTTGTGGAGAGCGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR-3UTR CCA 90 bp CCTCTGTCTTGCCAAGCACCCTTCTGGGGTCCTCTTCCTTTTCCAGAGCATTGTCTGCCTTTAACTTCTTaGTGGAGCAAAGCCTGGATG +
Preference number: 2 (lower is better)
Translates to: PLSCQAPFWGPLPFPEHCLPLTS*WSKAWM
Trigger: CATCCAGGCTTTGCTCCACCAAGAAGTTAAAGGCAG...ACAATGCTCTGGAAAAGGAAGAGGACCCCAGAAGGGTGCTTGGCAAGACAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR-3UTR CCA 90 bp TTCTTCGTCCAGCACTCATCCATTGCTTCTGTTTCACGCTCAGCAGGGCCAGGGATGAATGGCTTCTTGTaGAGAGGAGCTGTGGCTTTA +
Preference number: 2 (lower is better)
Translates to: FFVQHSSIASVSRSAGPGMNGFL*RGAVAL
Trigger: TAAAGCCACAGCTCCTCTCCACAAGAAGCCATTCAT...CCCTGGCCCTGCTGAGCGTGAAACAGAAGCAATGGATGAGTGCTGGACGAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR-3UTR CCA 90 bp CAACCGGGATGCACCTGGAGATTTATCAGCCAGAAGCTTTCAAATGCTCCCTATGTGGCTGGCAGACAGTaGCTACTCAAGAAGGTTCCC +
Preference number: 2 (lower is better)
Translates to: QPGCTWRFISQKLSNAPYVAGRQ*LLKKVP
Trigger: GGGAACCTTCTTGAGTAGCCACTGTCTGCCAGCCAC...ATAGGGAGCATTTGAAAGCTTCTGGCTGATAAATCTCCAGGTGCATCCCGGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR CAA 90 bp TTTCCTACAAAACTGGTACCCTGTGCCACTAGGGGAGGAGAACTGTaGCCTGCTAAGTTGGTGGCAGGAACCAGCTTCCTGAAGGATATA +
Preference number: 2 (lower is better)
Translates to: FPTKLVPCATRGGEL*PAKLVAGTSFLKDI
Trigger: TATATCCTTCAGGAAGCTGGTTCCTGCCACCAACTTAGCAGGCAACAGTTCTCCTCCCCTAGTGGCACAGGGTACCAGTTTTGTAGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR-3UTR TCA 90 bp CAACCGGGATGCACCTGGAGATTTATCAGCCAGAAGCTTTCAAATGCTCCCTATACTTGTCCTTCCATCTaGGACTCCCAGTGTGACAGC +
Preference number: 2 (lower is better)
Translates to: QPGCTWRFISQKLSNAPYTCPSI*DSQCDS
Trigger: GCTGTCACACTGGGAGTCTCAGATGGAAGGACAAGT...ATAGGGAGCATTTGAAAGCTTCTGGCTGATAAATCTCCAGGTGCATCCCGGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR-3UTR TCA 90 bp CCTCTGTCTTGCCAAGCACCCTTCTGGGGTCCTCTTCCTTTTCCAGAGCATTGTTCTTGTGCAGATCAATaGAACGAAGCGAAGCTGGAT +
Preference number: 2 (lower is better)
Translates to: PLSCQAPFWGPLPFPEHCSCADQ*NEAKLD
Trigger: ATCCAGCTTCGCTTCGTTTCATTGATCTGCACAAGA...ACAATGCTCTGGAAAAGGAAGAGGACCCCAGAAGGGTGCTTGGCAAGACAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR-3UTR CCA 90 bp GTCTTGCCAAGCACCCTTCTGGGGTCCTCTTCCTTTTCCAGAGCATTGTCTCTTCTTTGGACCTGGGCATaGAGCTTTGGTCTCTTTGTT +
Preference number: 2 (lower is better)
Translates to: VLPSTLLGSSSFSRALSLLWTWA*SFGLFV
Trigger: AACAAAGAGACCAAAGCTCCATGCCCAGGTCCAAAG...AAGAGACAATGCTCTGGAAAAGGAAGAGGACCCCAGAAGGGTGCTTGGCAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR-3UTR CCA 90 bp TTCTTCGTCCAGCACTCATCCATTGCTTCTGTTTCACGCTCAGCAGGGCCAGGGCTGGAAGAAAGACCTTaGTTTTGTTCCGTGCTGTTT +
Preference number: 2 (lower is better)
Translates to: FFVQHSSIASVSRSAGPGLEERP*FCSVLF
Trigger: AAACAGCACGGAACAAAACCAAGGTCTTTCTTCCAG...CCCTGGCCCTGCTGAGCGTGAAACAGAAGCAATGGATGAGTGCTGGACGAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR-3UTR CCA 90 bp CAACCGGGATGCACCTGGAGATTTATCAGCCAGAAGCTTTCAAATGCTCCCTATAGGGCACGGAGAAGCTaGAGCCCAGAGTTAATAACA +
Preference number: 2 (lower is better)
Translates to: QPGCTWRFISQKLSNAPYRARRS*SPELIT
Trigger: TGTTATTAACTCTGGGCTCCAGCTTCTCCGTGCCCT...ATAGGGAGCATTTGAAAGCTTCTGGCTGATAAATCTCCAGGTGCATCCCGGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR-3UTR CCA 90 bp CAACCGGGATGCACCTGGAGATTTATCAGCCAGAAGCTTTCAAATGCTCCCTATGCAACGTCTGCTGTGTaGTTAGACAGCGATCCAAAG +
Preference number: 2 (lower is better)
Translates to: QPGCTWRFISQKLSNAPYATSAV*LDSDPK
Trigger: CTTTGGATCGCTGTCTAACCACACAGCAGACGTTGC...ATAGGGAGCATTTGAAAGCTTCTGGCTGATAAATCTCCAGGTGCATCCCGGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR-3UTR CCA 90 bp TTCTTCGTCCAGCACTCATCCATTGCTTCTGTTTCACGCTCAGCAGGGCCAGGGAAAGTGGCCTTGGCATaGCTGGTTGTGAATTATAAT +
Preference number: 2 (lower is better)
Translates to: FFVQHSSIASVSRSAGPGKVALA*LVVNYN
Trigger: ATTATAATTCACAACCAGCCATGCCAAGGCCACTTT...CCCTGGCCCTGCTGAGCGTGAAACAGAAGCAATGGATGAGTGCTGGACGAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR-3UTR CCA 90 bp CAACCGGGATGCACCTGGAGATTTATCAGCCAGAAGCTTTCAAATGCTCCCTATTTCACCCTCATGGCGTaGCTTGAGTCCAGCTTTTTC +
Preference number: 2 (lower is better)
Translates to: QPGCTWRFISQKLSNAPYFTLMA*LESSFF
Trigger: GAAAAAGCTGGACTCAAGCCACGCCATGAGGGTGAA...ATAGGGAGCATTTGAAAGCTTCTGGCTGATAAATCTCCAGGTGCATCCCGGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR-3UTR CCA 90 bp CAAGCACCCTTCTGGGGTCCTCTTCCTTTTCCAGAGCATTGTCTCTTGTGCAGACTCATCCAAAGGGTGTaGACTTCATTGGTTCTTGGT +
Preference number: 2 (lower is better)
Translates to: QAPFWGPLPFPEHCLLCRLIQRV*TSLVLG
Trigger: ACCAAGAACCAATGAAGTCCACACCCTTTGGATGAG...TCTGCACAAGAGACAATGCTCTGGAAAAGGAAGAGGACCCCAGAAGGGTGCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR CAA 90 bp CAGCTTCCTGAAGGATATAAATTCGCTGGAAGAAAGACCTTGGTTTaGTTCCGTGCTGTTTTCCCATCTCTAGAGCAGTGGCTGGCAGAC +
Preference number: 2 (lower is better)
Translates to: QLPEGYKFAGRKTLV*FRAVFPSLEQWLAD
Trigger: GTCTGCCAGCCACTGCTCTAGAGATGGGAAAACAGCACGGAACAAAACCAAGGTCTTTCTTCCAGCGAATTTATATCCTTCAGGAAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR CAA 90 bp TGCACCTGGAGATTTATCAGCCAGAAGCTTTCAAATGCTCCCTATTaGTTCTGCCCAGGCCATTCTTCGTCCAGCACTCATCCATTGCTT +
Preference number: 2 (lower is better)
Translates to: CTWRFISQKLSNAPY*FCPGHSSSSTHPLL
Trigger: AAGCAATGGATGAGTGCTGGACGAAGAATGGCCTGGGCAGAACAAATAGGGAGCATTTGAAAGCTTCTGGCTGATAAATCTCCAGGTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR-3UTR TCA 90 bp CATTGGTACTATCTAGGTACACATCTCCTCTCAAAAGATGAGAATATACAGGTGTCGTGCCTCTCGGCTTaGAGAACCACCTTCTCCCGG +
Preference number: 2 (lower is better)
Translates to: HWYYLGTHLLSKDENIQVSCLSA*RTTFSR
Trigger: CCGGGAGAAGGTGGTTCTTCAAGCCGAGAGGCACGA...CACCTGTATATTCTCATCTTTTGAGAGGAGATGTGTACCTAGATAGTACCAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR-3UTR GCA 90 bp CCTCTGTCTTGCCAAGCACCCTTCTGGGGTCCTCTTCCTTTTCCAGAGCATTGTTTGCGAAGTGTTTGGTaGATACTTGTGCTCATCATT +
Preference number: 2 (lower is better)
Translates to: PLSCQAPFWGPLPFPEHCLRSVW*ILVLII
Trigger: AATGATGAGCACAAGTATGCACCAAACACTTCGCAA...ACAATGCTCTGGAAAAGGAAGAGGACCCCAGAAGGGTGCTTGGCAAGACAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR-3UTR GCA 90 bp CAACCGGGATGCACCTGGAGATTTATCAGCCAGAAGCTTTCAAATGCTCCCTATGTAACTGCTGGGAGATaGCAGGTAGATGCATTGAGT +
Preference number: 2 (lower is better)
Translates to: QPGCTWRFISQKLSNAPYVTAGR*QVDALS
Trigger: ACTCAATGCATCTACCTGGCATCTCCCAGCAGTTAC...ATAGGGAGCATTTGAAAGCTTCTGGCTGATAAATCTCCAGGTGCATCCCGGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR-3UTR CCA 90 bp TCTGCTTTCTTCCTTTGCTGGACCACTTTTCCTACAAAACTGGTACCCTGTGCCTTTCCCCAGGGTGCCTaGTTTATGACAGGGATTGAT +
Preference number: 2 (lower is better)
Translates to: SAFFLCWTTFPTKLVPCAFPQGA*FMTGID
Trigger: ATCAATCCCTGTCATAAACCAGGCACCCTGGGGAAA...GGCACAGGGTACCAGTTTTGTAGGAAAAGTGGTCCAGCAAAGGAAGAAAGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR-3UTR CCA 90 bp AACCAGCTTCCTGAAGGATATAAATTCGCTGGAAGAAAGACCTTGGTTTTGTTCGCTACACGCCAAGGATaGAAGCCAGACCTCTGCGCT +
Preference number: 2 (lower is better)
Translates to: NQLPEGYKFAGRKTLVLFATRQG*KPDLCA
Trigger: AGCGCAGAGGTCTGGCTTCCATCCTTGGCGTGTAGC...GAACAAAACCAAGGTCTTTCTTCCAGCGAATTTATATCCTTCAGGAAGCTGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR-3UTR CCA 90 bp TCTGCTTTCTTCCTTTGCTGGACCACTTTTCCTACAAAACTGGTACCCTGTGCCCCTTTAACTTCTTGGTaGAGCAAAGCCTGGATGCCA +
Preference number: 2 (lower is better)
Translates to: SAFFLCWTTFPTKLVPCAPLTSW*SKAWMP
Trigger: TGGCATCCAGGCTTTGCTCCACCAAGAAGTTAAAGG...GGCACAGGGTACCAGTTTTGTAGGAAAAGTGGTCCAGCAAAGGAAGAAAGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR-3UTR GCA 90 bp CAAGCACCCTTCTGGGGTCCTCTTCCTTTTCCAGAGCATTGTCTCTTGTGCAGATTTGGTGCATACTTGTaGTCATCATTCTTCTTCTCC +
Preference number: 2 (lower is better)
Translates to: QAPFWGPLPFPEHCLLCRFGAYL*SSFFFS
Trigger: GGAGAAGAAGAATGATGAGCACAAGTATGCACCAAA...TCTGCACAAGAGACAATGCTCTGGAAAAGGAAGAGGACCCCAGAAGGGTGCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR-3UTR CCA 90 bp GTCTTGCCAAGCACCCTTCTGGGGTCCTCTTCCTTTTCCAGAGCATTGTCTCTTTTTTTGCGAAGTGTTTaGTGCATACTTGTGCTCATC +
Preference number: 2 (lower is better)
Translates to: VLPSTLLGSSSFSRALSLFLRSV*CILVLI
Trigger: GATGAGCACAAGTATGCACCAAACACTTCGCAAAAA...AAGAGACAATGCTCTGGAAAAGGAAGAGGACCCCAGAAGGGTGCTTGGCAAGAC
47% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR-3UTR CCA 90 bp GTCTTGCCAAGCACCCTTCTGGGGTCCTCTTCCTTTTCCAGAGCATTGTCTCTTATTTGTGCAAAGTTCTaGAAGTTCCATACTCCTCTG +
Preference number: 2 (lower is better)
Translates to: VLPSTLLGSSSFSRALSLICAKF*KFHTPL
Trigger: CAGAGGAGTATGGAACTTCCAGAACTTTGCACAAAT...AAGAGACAATGCTCTGGAAAAGGAAGAGGACCCCAGAAGGGTGCTTGGCAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR-3UTR CCA 90 bp AACCAGCTTCCTGAAGGATATAAATTCGCTGGAAGAAAGACCTTGGTTTTGTTCTATATGAGCGAAGGGTaGTCTCCCCTCTCCAGGCAC +
Preference number: 2 (lower is better)
Translates to: NQLPEGYKFAGRKTLVLFYMSEG*SPLSRH
Trigger: GTGCCTGGAGAGGGGAGACCACCCTTCGCTCATATA...GAACAAAACCAAGGTCTTTCTTCCAGCGAATTTATATCCTTCAGGAAGCTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR-3UTR TCA 90 bp AACCAGCTTCCTGAAGGATATAAATTCGCTGGAAGAAAGACCTTGGTTTTGTTCACACTCACAAGTCCGTaGGAGGCAGAAAGAGAGGCA +
Preference number: 2 (lower is better)
Translates to: NQLPEGYKFAGRKTLVLFTLTSP*EAEREA
Trigger: TGCCTCTCTTTCTGCCTCTCACGGACTTGTGAGTGT...GAACAAAACCAAGGTCTTTCTTCCAGCGAATTTATATCCTTCAGGAAGCTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR-3UTR GCA 90 bp GAGAAGTCATCCACTTGTCCTTCACACTCACAAGTCCGTGAGAGGCAGAAAGAGTGGCTTTGCAATTTGTaGAAAGTTCTGGAAGTTCCA +
Preference number: 2 (lower is better)
Translates to: EKSSTCPSHSQVRERQKEWLCNL*KVLEVP
Trigger: TGGAACTTCCAGAACTTTGCACAAATTGCAAAGCCA...CTCTTTCTGCCTCTCACGGACTTGTGAGTGTGAAGGACAAGTGGATGACTTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR-3UTR GCA 90 bp GTCTTGCCAAGCACCCTTCTGGGGTCCTCTTCCTTTTCCAGAGCATTGTCTCTTTGTTTTCTTTTTAATTaGCAGGGACCACTGGATGAT +
Preference number: 2 (lower is better)
Translates to: VLPSTLLGSSSFSRALSLCFLFN*QGPLDD
Trigger: ATCATCCAGTGGTCCCTGGCAATTAAAAAGAAAACA...AAGAGACAATGCTCTGGAAAAGGAAGAGGACCCCAGAAGGGTGCTTGGCAAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR-3UTR GCA 90 bp GAGAAGTCATCCACTTGTCCTTCACACTCACAAGTCCGTGAGAGGCAGAAAGAGAGCTTCTGTAACCTATaGTCTTCAAGTATTGCTTGC +
Preference number: 2 (lower is better)
Translates to: EKSSTCPSHSQVRERQKESFCNL*SSSIAC
Trigger: GCAAGCAATACTTGAAGAGCATAGGTTACAGAAGCT...CTCTTTCTGCCTCTCACGGACTTGTGAGTGTGAAGGACAAGTGGATGACTTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR-3UTR GCA 90 bp GCTCCCTATTTGTTCTGCCCAGGCCATTCTTCGTCCAGCACTCATCCATTGCTTCTGATAAGCTTTGAGTaGTATGAAGAGCAAACACTT +
Preference number: 2 (lower is better)
Translates to: APYLFCPGHSSSSTHPLLLISFE*YEEQTL
Trigger: AAGTGTTTGCTCTTCATAGCACTCAAAGCTTATCAG...AAGCAATGGATGAGTGCTGGACGAAGAATGGCCTGGGCAGAACAAATAGGGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR CAA 90 bp GGAGAGGCCCACCTCACCCCACTTCTCATAGTAACTTTAGGGAAATaGAAAGGAAACATATCAAAGACCAGCTCCTCATTTGTTGAGGTT +
Preference number: 2 (lower is better)
Translates to: GEAHLTPLLIVTLGK*KGNISKTSSSFVEV
Trigger: AACCTCAACAAATGAGGAGCTGGTCTTTGATATGTTTCCTTTCAATTTCCCTAAAGTTACTATGAGAAGTGGGGTGAGGTGGGCCTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR-3UTR TCA 90 bp AAGTTCCATACTCCTCTGGCTGCCGGGATAATTCCAGGTTTTACTGGCCTCTGTCCAATATACATCAAATaGGTTTTCATGCAAAGCAGC +
Preference number: 2 (lower is better)
Translates to: KFHTPLAAGIIPGFTGLCPIYIK*VFMQSS
Trigger: GCTGCTTTGCATGAAAACTCATTTGATGTATATTGG...ACAGAGGCCAGTAAAACCTGGAATTATCCCGGCAGCCAGAGGAGTATGGAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR-3UTR CCA 90 bp TCTGCTTTCTTCCTTTGCTGGACCACTTTTCCTACAAAACTGGTACCCTGTGCCCATCTCTGCTTTCTCTaGCATTTGGAAATAGGCATT +
Preference number: 2 (lower is better)
Translates to: SAFFLCWTTFPTKLVPCAHLCFL*HLEIGI
Trigger: AATGCCTATTTCCAAATGCCAGAGAAAGCAGAGATG...GGCACAGGGTACCAGTTTTGTAGGAAAAGTGGTCCAGCAAAGGAAGAAAGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR-3UTR CCA 90 bp AACCAGCTTCCTGAAGGATATAAATTCGCTGGAAGAAAGACCTTGGTTTTGTTCTGCTGTAGGCCCAGATaGTCAGGAGCTTCCGTATAT +
Preference number: 2 (lower is better)
Translates to: NQLPEGYKFAGRKTLVLFCCRPR*SGASVY
Trigger: ATATACGGAAGCTCCTGACCATCTGGGCCTACAGCA...GAACAAAACCAAGGTCTTTCTTCCAGCGAATTTATATCCTTCAGGAAGCTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR-3UTR CCA 90 bp AACCAGCTTCCTGAAGGATATAAATTCGCTGGAAGAAAGACCTTGGTTTTGTTCTCCAAAAGTAACTGCTaGGAGATGCCAGGTAGATGC +
Preference number: 2 (lower is better)
Translates to: NQLPEGYKFAGRKTLVLFSKSNC*EMPGRC
Trigger: GCATCTACCTGGCATCTCCCAGCAGTTACTTTTGGA...GAACAAAACCAAGGTCTTTCTTCCAGCGAATTTATATCCTTCAGGAAGCTGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR CAA 90 bp GCATGGAGCTTTGGTCTCTTTGTTTGGAATCTACACTCAGGAGAATaGGTTATCCATAGTTTTAGGCATCATCAGAAGAGACAGAGAAGG +
Preference number: 2 (lower is better)
Translates to: AWSFGLFVWNLHSGE*VIHSFRHHQKRQRR
Trigger: CCTTCTCTGTCTCTTCTGATGATGCCTAAAACTATGGATAACCAATTCTCCTGAGTGTAGATTCCAAACAAAGAGACCAAAGCTCCATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR-3UTR TCA 90 bp AACCAGCTTCCTGAAGGATATAAATTCGCTGGAAGAAAGACCTTGGTTTTGTTCTCTCCTCTCAAAAGATaGGAATATACAGGTGTGTGG +
Preference number: 2 (lower is better)
Translates to: NQLPEGYKFAGRKTLVLFSPLKR*EYTGVW
Trigger: CCACACACCTGTATATTCTCATCTTTTGAGAGGAGA...GAACAAAACCAAGGTCTTTCTTCCAGCGAATTTATATCCTTCAGGAAGCTGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR-3UTR GCA 90 bp TACTATCTAGGTACACATCTCCTCTCAAAAGATGAGAATATACAGGTGTGTGGTGTCTCTCAGCATCTCTaGTTTCTCTGGCATTTGGAA +
Preference number: 2 (lower is better)
Translates to: YYLGTHLLSKDENIQVCGVSQHL*FLWHLE
Trigger: TTCCAAATGCCAGAGAAAGCAGAGATGCTGAGAGAC...ACCACACACCTGTATATTCTCATCTTTTGAGAGGAGATGTGTACCTAGATAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR TCA 72 bp ACCTTCTCCCGGCCCCGGGTTCTCTGGTGTTCTCACTaGGGATGGACGACGCCCACTGTCTCTCCCAGCTGG +
Preference number: 3 (lower is better)
Translates to: TFSRPRVLWCSH*GWTTPTVSPSW
Trigger: CCAGCTGGGAGAGACAGTGGGCGTCGTCCATCCTCAGTGAGAACACCAGAGAACCCGGGGCCGGGAGAAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR TCA 72 bp AGAGGCAGAACTGTCCCCAGCTCGTGCCTCTCGGCTTaGAGAACCACCTTCTCCCGGCCCCGGGTTCTCTGG +
Preference number: 3 (lower is better)
Translates to: RGRTVPSSCLSA*RTTFSRPRVLW
Trigger: CCAGAGAACCCGGGGCCGGGAGAAGGTGGTTCTTCAAGCCGAGAGGCACGAGCTGGGGACAGTTCTGCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR CCA 72 bp CTCTCCCAGCTGGAACTGGCTATGACGAAACTTGGCTaGCGTAGGGAGAGGAGTCCTCCCCTCTCCCCAGGA +
Preference number: 3 (lower is better)
Translates to: LSQLELAMTKLG*RRERSPPLSPG
Trigger: TCCTGGGGAGAGGGGAGGACTCCTCTCCCTACGCCAGCCAAGTTTCGTCATAGCCAGTTCCAGCTGGGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR CCA 72 bp GGCCCACACACCTCCAGGCCGTTTCCCCAGGGTGCCTaGTTTATGACAGGGATTGATATGAGGCAGGGCTGC +
Preference number: 3 (lower is better)
Translates to: GPHTSRPFPQGA*FMTGIDMRQGC
Trigger: GCAGCCCTGCCTCATATCAATCCCTGTCATAAACCAGGCACCCTGGGGAAACGGCCTGGAGGTGTGTGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR-3UTR CAA 90 bp GAGGCAGAACTGTCCCCAGCTCGTGCCTCTCGGCTTGAAGAACCACCTTCTCCCTCCCAGTGTGACAGCTaGGACAGGTCCCTCTTCCCA +
Preference number: 3 (lower is better)
Translates to: EAELSPARASRLEEPPSPSQCDS*DRSLFP
Trigger: TGGGAAGAGGGACCTGTCCAAGCTGTCACACTGGGA...GGGAGAAGGTGGTTCTTCAAGCCGAGAGGCACGAGCTGGGGACAGTTCTGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR TCA 72 bp ACGACGCCCACTGTCTCTCCCAGCTGGAACTGGCTATaGCGAAACTTGGCTGGCGTAGGGAGAGGAGTCCTC +
Preference number: 3 (lower is better)
Translates to: TTPTVSPSWNWL*RNLAGVGRGVL
Trigger: GAGGACTCCTCTCCCTACGCCAGCCAAGTTTCGTCATAGCCAGTTCCAGCTGGGAGAGACAGTGGGCGTCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR GCA 72 bp CAGCAGCAGGGGCCAGCTGGAGGGAGTGCTCTCCATTaGCCATTAGCATCCTCTGTCTTGCCAAGCACCCTT +
Preference number: 3 (lower is better)
Translates to: QQQGPAGGSALH*PLASSVLPSTL
Trigger: AAGGGTGCTTGGCAAGACAGAGGATGCTAATGGGCAATGGAGAGCACTCCCTCCAGCTGGCCCCTGCTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR CCA 72 bp CACTCACAGAGCGCCTTTCCTCTCGATGACTCCCACTaGCTTCTATGGGGCCTTTGGACCTGGGCATGGAGC +
Preference number: 3 (lower is better)
Translates to: HSQSAFPLDDSH*LLWGLWTWAWS
Trigger: GCTCCATGCCCAGGTCCAAAGGCCCCATAGAAGCCAGTGGGAGTCATCGAGAGGAAAGGCGCTCTGTGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR CCA 72 bp TGGGGAAAGGCAGGTGGGCTCCGGCCCCTAGTCTCATaGGATAGAGAGCTTGTCCCTTCTGCCCTTACACAC +
Preference number: 3 (lower is better)
Translates to: WGKAGGLRPLVS*DRELVPSALTH
Trigger: GTGTGTAAGGGCAGAAGGGACAAGCTCTCTATCCCATGAGACTAGGGGCCGGAGCCCACCTGCCTTTCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR GCA 72 bp GGCCCTGAAGTTCATCTCCCAAGTTCCCCGTCGATCTaGTCCCACAGCCCTGTGTCTGTGAAGCCACTTTGC +
Preference number: 3 (lower is better)
Translates to: GPEVHLPSSPSI*SHSPVSVKPLC
Trigger: GCAAAGTGGCTTCACAGACACAGGGCTGTGGGAGCAGATCGACGGGGAACTTGGGAGATGAACTTCAGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR CCA 72 bp TCCAAATCAACTTTCAAATGGAACCTCGTGGAGGCCTaGCCCACACACCTCCAGGCCGTTTCCCCAGGGTGC +
Preference number: 3 (lower is better)
Translates to: SKSTFKWNLVEA*PTHLQAVSPGC
Trigger: GCACCCTGGGGAAACGGCCTGGAGGTGTGTGGGCCAGGCCTCCACGAGGTTCCATTTGAAAGTTGATTTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR-3UTR CAA 90 bp GCAGCCAGAAGAGATGGTGGCAGTAGAAACAAGAGCAGCTCTCATCGCTGGGGGCCCAGTCCCACACCTTaGCTTCCACTTGTCCTCCTA +
Preference number: 3 (lower is better)
Translates to: AARRDGGSRNKSSSHRWGPSPTP*LPLVLL
Trigger: TAGGAGGACAAGTGGAAGCAAAGGTGTGGGACTGGG...CCCCCAGCGATGAGAGCTGCTCTTGTTTCTACTGCCACCATCTCTTCTGGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR TCA 72 bp CCCCATCACTTGTCCTTCCATCTGAGACTCCCAGTGTaGCAGCTTGGACAGGTCCCTCTTCCCAGGAATGCG +
Preference number: 3 (lower is better)
Translates to: PHHLSFHLRLPV*QLGQVPLPRNA
Trigger: CGCATTCCTGGGAAGAGGGACCTGTCCAAGCTGTCACACTGGGAGTCTCAGATGGAAGGACAAGTGATGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR TCA 72 bp AAGGTCCTGACACTCACAGAGCGCCTTTCCTCTCGATaGCTCCCACTGGCTTCTATGGGGCCTTTGGACCTG +
Preference number: 3 (lower is better)
Translates to: KVLTLTERLSSR*LPLASMGPLDL
Trigger: CAGGTCCAAAGGCCCCATAGAAGCCAGTGGGAGTCATCGAGAGGAAAGGCGCTCTGTGAGTGTCAGGACCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR GCA 72 bp GGCAAGAAACTAGAGCTGGGGAGACCGGGCAACGTCTaGTGTGTGGTTAGACAGCGATCCAAAGCTACACGC +
Preference number: 3 (lower is better)
Translates to: GKKLELGRPGNV*CVVRQRSKATR
Trigger: GCGTGTAGCTTTGGATCGCTGTCTAACCACACAGCAGACGTTGCCCGGTCTCCCCAGCTCTAGTTTCTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR GCA 72 bp TCTGCCCAGGCCATTCTTCGTCCAGCACTCATCCATTaGTTCTGTTTCACGCTCAGCAGGGCCAGGGGTCTT +
Preference number: 3 (lower is better)
Translates to: SAQAILRPALIH*FCFTLSRARGL
Trigger: AAGACCCCTGGCCCTGCTGAGCGTGAAACAGAAGCAATGGATGAGTGCTGGACGAAGAATGGCCTGGGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR-3UTR CAA 90 bp TTCTTCGTCCAGCACTCATCCATTGCTTCTGTTTCACGCTCAGCAGGGCCAGGGCTGTTGCCTGCTAAGTaGGTGGCAGGAACCAGCTTC +
Preference number: 3 (lower is better)
Translates to: FFVQHSSIASVSRSAGPGLLPAK*VAGTSF
Trigger: GAAGCTGGTTCCTGCCACCAACTTAGCAGGCAACAG...CCCTGGCCCTGCTGAGCGTGAAACAGAAGCAATGGATGAGTGCTGGACGAAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR TCA 72 bp CAAAGCATGTTCCTGAGACAAGGCGTCGGAAGGCCCTaGAGTTCATCTCCCAAGTTCCCCGTCGATCTGCTC +
Preference number: 3 (lower is better)
Translates to: QSMFLRQGVGRP*SSSPKFPVDLL
Trigger: GAGCAGATCGACGGGGAACTTGGGAGATGAACTTCAGGGCCTTCCGACGCCTTGTCTCAGGAACATGCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR GCA 72 bp CTCCGGCTCTTCACTCTCCACCCTCCAATTGGCCATTaGCCCATCATTCTCCACGCTCTCCACAAACCTTCA +
Preference number: 3 (lower is better)
Translates to: LRLFTLHPPIGH*PIILHALHKPS
Trigger: TGAAGGTTTGTGGAGAGCGTGGAGAATGATGGGGCAATGGCCAATTGGAGGGTGGAGAGTGAAGAGCCGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR CCA 72 bp CCTCTCGATGACTCCCACTGGCTTCTATGGGGCCTTTaGACCTGGGCATGGAGCTTTGGTCTCTTTGTTTGG +
Preference number: 3 (lower is better)
Translates to: PLDDSHWLLWGL*TWAWSFGLFVW
Trigger: CCAAACAAAGAGACCAAAGCTCCATGCCCAGGTCCAAAGGCCCCATAGAAGCCAGTGGGAGTCATCGAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR TCA 72 bp TGTCAGCCCAAGTTCCCCAAGTCTCTCATGGAATCCTaGGAAATGTGGCCAAACCACTCACAGCCAGCTCCG +
Preference number: 3 (lower is better)
Translates to: CQPKFPKSLMES*EMWPNHSQPAP
Trigger: CGGAGCTGGCTGTGAGTGGTTTGGCCACATTTCTCAGGATTCCATGAGAGACTTGGGGAACTTGGGCTGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR CCA 72 bp CCAGATGGTCAGGAGCTTCCGTATATGAGCGAAGGGTaGTCTCCCCTCTCCAGGCACGAGAGAATGAAAGAA +
Preference number: 3 (lower is better)
Translates to: PDGQELPYMSEG*SPLSRHERMKE
Trigger: TTCTTTCATTCTCTCGTGCCTGGAGAGGGGAGACCACCCTTCGCTCATATACGGAAGCTCCTGACCATCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR TCA 72 bp TGTGAGAAGAATGAGATGTGGGTGTCCACGAGAGGCTaGGGAATCTCCAGTTTGCTTATTGGGTGGAGGCCC +
Preference number: 3 (lower is better)
Translates to: CEKNEMWVSTRG*GISSLLIGWRP
Trigger: GGGCCTCCACCCAATAAGCAAACTGGAGATTCCTCAGCCTCTCGTGGACACCCACATCTCATTCTTCTCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR TCA 72 bp CAGGCTGCACTGCAGCAGAAAGAAGACAGCTCAGGCTaGAGGGAGAGCTTCTCTGCTGTGAGAAGAATGAGA +
Preference number: 3 (lower is better)
Translates to: QAALQQKEDSSG*RESFSAVRRMR
Trigger: TCTCATTCTTCTCACAGCAGAGAAGCTCTCCCTTCAGCCTGAGCTGTCTTCTTTCTGCTGCAGTGCAGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR CCA 72 bp TGGGAATCACATGTGGTCAGCAGGGCCTTTGGAAATTaGAACCACTTGGAGGTAAAGCAGGGCACGGAGAAG +
Preference number: 3 (lower is better)
Translates to: WESHVVSRAFGN*NHLEVKQGTEK
Trigger: CTTCTCCGTGCCCTGCTTTACCTCCAAGTGGTTCCAATTTCCAAAGGCCCTGCTGACCACATGTGATTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR-3UTR CAA 90 bp TTCTTCGTCCAGCACTCATCCATTGCTTCTGTTTCACGCTCAGCAGGGCCAGGGCAGGGCCTTTGGAAATaGGAACCACTTGGAGGTAAA +
Preference number: 3 (lower is better)
Translates to: FFVQHSSIASVSRSAGPGQGLWK*EPLGGK
Trigger: TTTACCTCCAAGTGGTTCCAATTTCCAAAGGCCCTG...CCCTGGCCCTGCTGAGCGTGAAACAGAAGCAATGGATGAGTGCTGGACGAAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR-3UTR CAA 90 bp CAACCGGGATGCACCTGGAGATTTATCAGCCAGAAGCTTTCAAATGCTCCCTATGCAGGGCCAGGGGTCTaGACTGCTATTTCCTGTCCT +
Preference number: 3 (lower is better)
Translates to: QPGCTWRFISQKLSNAPYAGPGV*TAISCP
Trigger: AGGACAGGAAATAGCAGTCAAGACCCCTGGCCCTGC...ATAGGGAGCATTTGAAAGCTTCTGGCTGATAAATCTCCAGGTGCATCCCGGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR-3UTR CAA 90 bp TTCTTCGTCCAGCACTCATCCATTGCTTCTGTTTCACGCTCAGCAGGGCCAGGGTACTGGCCTCTGTTTTaGCGAAGTGTTTGGTGCATA +
Preference number: 3 (lower is better)
Translates to: FFVQHSSIASVSRSAGPGYWPLF*RSVWCI
Trigger: TATGCACCAAACACTTCGCAAAAACAGAGGCCAGTA...CCCTGGCCCTGCTGAGCGTGAAACAGAAGCAATGGATGAGTGCTGGACGAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR-3UTR CAA 90 bp GCTCCCTATTTGTTCTGCCCAGGCCATTCTTCGTCCAGCACTCATCCATTGCTTCCTGGGCATGGAGCTTaGGTCTCTTTGTTTGGAATC +
Preference number: 3 (lower is better)
Translates to: APYLFCPGHSSSSTHPLLPGHGA*VSLFGI
Trigger: GATTCCAAACAAAGAGACCAAAGCTCCATGCCCAGG...AAGCAATGGATGAGTGCTGGACGAAGAATGGCCTGGGCAGAACAAATAGGGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR-3UTR CAA 90 bp CAACCGGGATGCACCTGGAGATTTATCAGCCAGAAGCTTTCAAATGCTCCCTATCACCTTTGCTTCCACTaGTCCTCCTACCCCCTGACT +
Preference number: 3 (lower is better)
Translates to: QPGCTWRFISQKLSNAPYHLCFH*SSYPLT
Trigger: AGTCAGGGGGTAGGAGGACAAGTGGAAGCAAAGGTG...ATAGGGAGCATTTGAAAGCTTCTGGCTGATAAATCTCCAGGTGCATCCCGGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR TCA 72 bp TTAACTTCTTGGTGGAGCAAAGCCTGGATGCCAGTCTaGGCAGCCATGCGGCCAGAAAATCTTCACCCAAAC +
Preference number: 3 (lower is better)
Translates to: LTSWWSKAWMPV*AAMRPENLHPN
Trigger: GTTTGGGTGAAGATTTTCTGGCCGCATGGCTGCTCAGACTGGCATCCAGGCTTTGCTCCACCAAGAAGTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR GCA 72 bp AACGTGGGCATGCCACAGTCATTTCTACTGAGGAAGTaGTGTAGGCCCAGATGGTCAGGAGCTTCCGTATAT +
Preference number: 3 (lower is better)
Translates to: NVGMPQSFLLRK*CRPRWSGASVY
Trigger: ATATACGGAAGCTCCTGACCATCTGGGCCTACAGCACTTCCTCAGTAGAAATGACTGTGGCATGCCCACGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR GCA 72 bp TTCTGTTTCACGCTCAGCAGGGCCAGGGGTCTTGACTaGTATTTCCTGTCCTCATTTGGTGGAACTGAAGGA +
Preference number: 3 (lower is better)
Translates to: FCFTLSRARGLD*YFLSSFGGTEG
Trigger: TCCTTCAGTTCCACCAAATGAGGACAGGAAATAGCAGTCAAGACCCCTGGCCCTGCTGAGCGTGAAACAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR GCA 72 bp GAATCTCCAGTTTGCTTATTGGGTGGAGGCCCTGTATaGCAAGCAGTGGCTGTGATCGTGTCTCAGGACTTT +
Preference number: 3 (lower is better)
Translates to: ESPVCLLGGGPV*QAVAVIVSQDF
Trigger: AAAGTCCTGAGACACGATCACAGCCACTGCTTGGCATACAGGGCCTCCACCCAATAAGCAAACTGGAGATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR GCA 72 bp GAAAGAAGACAGCTCAGGCTGAAGGGAGAGCTTCTCTaGTGTGAGAAGAATGAGATGTGGGTGTCCACGAGA +
Preference number: 3 (lower is better)
Translates to: ERRQLRLKGELL*CEKNEMWVSTR
Trigger: TCTCGTGGACACCCACATCTCATTCTTCTCACAGCAGAGAAGCTCTCCCTTCAGCCTGAGCTGTCTTCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR CCA 72 bp TCCCACTGGCTTCTATGGGGCCTTTGGACCTGGGCATaGAGCTTTGGTCTCTTTGTTTGGAATCTACACTCA +
Preference number: 3 (lower is better)
Translates to: SHWLLWGLWTWA*SFGLFVWNLHS
Trigger: TGAGTGTAGATTCCAAACAAAGAGACCAAAGCTCCATGCCCAGGTCCAAAGGCCCCATAGAAGCCAGTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR CCA 72 bp GATGACTCCCACTGGCTTCTATGGGGCCTTTGGACCTaGGCATGGAGCTTTGGTCTCTTTGTTTGGAATCTA +
Preference number: 3 (lower is better)
Translates to: DDSHWLLWGLWT*AWSFGLFVWNL
Trigger: TAGATTCCAAACAAAGAGACCAAAGCTCCATGCCCAGGTCCAAAGGCCCCATAGAAGCCAGTGGGAGTCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR CCA 72 bp TCCCTCTTTTTCTCATCCAAAGGGTGTGGACTTCATTaGTTCTTGGTGGCCCAAAGCGAAGAGGTGTGGAGG +
Preference number: 3 (lower is better)
Translates to: SLFFSSKGCGLH*FLVAQSEEVWR
Trigger: CCTCCACACCTCTTCGCTTTGGGCCACCAAGAACCAATGAAGTCCACACCCTTTGGATGAGAAAAAGAGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR-3UTR CAA 90 bp TTCTTCGTCCAGCACTCATCCATTGCTTCTGTTTCACGCTCAGCAGGGCCAGGGAGAATTAAACAAAAGTaGGACGGGATTAACAGGGCG +
Preference number: 3 (lower is better)
Translates to: FFVQHSSIASVSRSAGPGRIKQK*DGINRA
Trigger: CGCCCTGTTAATCCCGTCCAACTTTTGTTTAATTCT...CCCTGGCCCTGCTGAGCGTGAAACAGAAGCAATGGATGAGTGCTGGACGAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR-3UTR CAA 90 bp TTCTTCGTCCAGCACTCATCCATTGCTTCTGTTTCACGCTCAGCAGGGCCAGGGGTTTTTGCGAAGTGTTaGGTGCATACTTGTGCTCAT +
Preference number: 3 (lower is better)
Translates to: FFVQHSSIASVSRSAGPGVFAKC*VHTCAH
Trigger: ATGAGCACAAGTATGCACCAAACACTTCGCAAAAAC...CCCTGGCCCTGCTGAGCGTGAAACAGAAGCAATGGATGAGTGCTGGACGAAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR-3UTR CAA 90 bp GTTGGTCTGCTTTCTTCCTTTGCTGGACCACTTTTCCTACAAAACTGGTACCCTCCCAGGCTACTTCCTTaGTCAGCCCAAGTTCCCCAA +
Preference number: 3 (lower is better)
Translates to: VGLLSSFAGPLFLQNWYPPRLLP*SAQVPQ
Trigger: TTGGGGAACTTGGGCTGACAAAGGAAGTAGCCTGGG...AGGGTACCAGTTTTGTAGGAAAAGTGGTCCAGCAAAGGAAGAAAGCAGACCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR TCA 72 bp GAAGTCATCCACTTGTCCTTCACACTCACAAGTCCGTaGGAGGCAGAAAGAGAGGCAGAAGGTAGTAACGTG +
Preference number: 3 (lower is better)
Translates to: EVIHLSFTLTSP*EAEREAEGSNV
Trigger: CACGTTACTACCTTCTGCCTCTCTTTCTGCCTCTCACGGACTTGTGAGTGTGAAGGACAAGTGGATGACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR CCA 72 bp AAGTCAAACACCTATGTCTCCAAATCAACTTTCAAATaGAACCTCGTGGAGGCCTGGCCCACACACCTCCAG +
Preference number: 3 (lower is better)
Translates to: KSNTYVSKSTFK*NLVEAWPTHLQ
Trigger: CTGGAGGTGTGTGGGCCAGGCCTCCACGAGGTTCCATTTGAAAGTTGATTTGGAGACATAGGTGTTTGACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR-3UTR CAA 90 bp GCTCCCTATTTGTTCTGCCCAGGCCATTCTTCGTCCAGCACTCATCCATTGCTTGGAGCTTTGGTCTCTTaGTTTGGAATCTACACTCAG +
Preference number: 3 (lower is better)
Translates to: APYLFCPGHSSSSTHPLLGALVS*FGIYTQ
Trigger: CTGAGTGTAGATTCCAAACAAAGAGACCAAAGCTCC...AAGCAATGGATGAGTGCTGGACGAAGAATGGCCTGGGCAGAACAAATAGGGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR TCA 72 bp GGAAAGGATGCTACCATTTTTCTCAAAGCATGTTCCTaGGACAAGGCGTCGGAAGGCCCTGAAGTTCATCTC +
Preference number: 3 (lower is better)
Translates to: GKDATIFLKACS*DKASEGPEVHL
Trigger: GAGATGAACTTCAGGGCCTTCCGACGCCTTGTCTCAGGAACATGCTTTGAGAAAAATGGTAGCATCCTTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR TCA 72 bp ATAATACAGATTCCAGTGTGTCAAGAGGAGTGGGTTTaGGCAGGAAAAGTTGTGGGGAAAGGCAGGTGGGCT +
Preference number: 3 (lower is better)
Translates to: IIQIPVCQEEWV*AGKVVGKGRWA
Trigger: AGCCCACCTGCCTTTCCCCACAACTTTTCCTGCTCAAACCCACTCCTCTTGACACACTGGAATCTGTATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR GCA 72 bp GTCTCCAAAAGTAACTGCTGGGAGATGCCAGGTAGATaGATTGAGTTAAGGGCTGGTAGAGATGCTACTGAG +
Preference number: 3 (lower is better)
Translates to: VSKSNCWEMPGR*IELRAGRDATE
Trigger: CTCAGTAGCATCTCTACCAGCCCTTAACTCAATGCATCTACCTGGCATCTCCCAGCAGTTACTTTTGGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR-3UTR CAA 90 bp GCTCCCTATTTGTTCTGCCCAGGCCATTCTTCGTCCAGCACTCATCCATTGCTTGTGTTTGGTGCATACTaGTGCTCATCATTCTTCTTC +
Preference number: 3 (lower is better)
Translates to: APYLFCPGHSSSSTHPLLVFGAY*CSSFFF
Trigger: GAAGAAGAATGATGAGCACAAGTATGCACCAAACAC...AAGCAATGGATGAGTGCTGGACGAAGAATGGCCTGGGCAGAACAAATAGGGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR-3UTR CAA 90 bp TCTGCTTTCTTCCTTTGCTGGACCACTTTTCCTACAAAACTGGTACCCTGTGCCCTTTTCTCTTCCCATTaGTCAGCCGCATTCAGGCAA +
Preference number: 3 (lower is better)
Translates to: SAFFLCWTTFPTKLVPCALFSSH*SAAFRQ
Trigger: TTGCCTGAATGCGGCTGACAAATGGGAAGAGAAAAG...GGCACAGGGTACCAGTTTTGTAGGAAAAGTGGTCCAGCAAAGGAAGAAAGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR-3UTR CAA 90 bp GTTGGTCTGCTTTCTTCCTTTGCTGGACCACTTTTCCTACAAAACTGGTACCCTCAAAAGAAAGTGGCCTaGGCATGGCTGGTTGTGAAT +
Preference number: 3 (lower is better)
Translates to: VGLLSSFAGPLFLQNWYPQKKVA*AWLVVN
Trigger: ATTCACAACCAGCCATGCCAAGGCCACTTTCTTTTG...AGGGTACCAGTTTTGTAGGAAAAGTGGTCCAGCAAAGGAAGAAAGCAGACCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR-3UTR CAA 90 bp AACCAGCTTCCTGAAGGATATAAATTCGCTGGAAGAAAGACCTTGGTTTTGTTCCCCTCATGGCGTGGCTaGAGTCCAGCTTTTTCCCTT +
Preference number: 3 (lower is better)
Translates to: NQLPEGYKFAGRKTLVLFPSWRG*SPAFSL
Trigger: AAGGGAAAAAGCTGGACTCAAGCCACGCCATGAGGG...GAACAAAACCAAGGTCTTTCTTCCAGCGAATTTATATCCTTCAGGAAGCTGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR TCA 72 bp GCAGACAGTGGCTACTCAAGAAGGTTCCCAGATGAATaGATGCAGGAAACAGTTCCCTCCTCCAATGAGATT +
Preference number: 3 (lower is better)
Translates to: ADSGYSRRFPDE*MQETVPSSNEI
Trigger: AATCTCATTGGAGGAGGGAACTGTTTCCTGCATTCATTCATCTGGGAACCTTCTTGAGTAGCCACTGTCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR CCA 72 bp TACTCCTCTGGCTGCCGGGATAATTCCAGGTTTTACTaGCCTCTGTTTTTGCGAAGTGTTTGGTGCATACTT +
Preference number: 3 (lower is better)
Translates to: YSSGCRDNSRFY*PLFLRSVWCIL
Trigger: AAGTATGCACCAAACACTTCGCAAAAACAGAGGCCAGTAAAACCTGGAATTATCCCGGCAGCCAGAGGAGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR-3UTR CAA 90 bp CAAGCACCCTTCTGGGGTCCTCTTCCTTTTCCAGAGCATTGTCTCTTGTGCAGATATGCTCTTCAAGTATaGCTTGCTGTAAACAGTGTT +
Preference number: 3 (lower is better)
Translates to: QAPFWGPLPFPEHCLLCRYALQV*LAVNSV
Trigger: AACACTGTTTACAGCAAGCAATACTTGAAGAGCATA...TCTGCACAAGAGACAATGCTCTGGAAAAGGAAGAGGACCCCAGAAGGGTGCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR GCA 72 bp GCCGGGATAATTCCAGGTTTTACTGGCCTCTGTTTTTaGGAAGTGTTTGGTGCATACTTGTGCTCATCATTC +
Preference number: 3 (lower is better)
Translates to: AGIIPGFTGLCF*EVFGAYLCSSF
Trigger: GAATGATGAGCACAAGTATGCACCAAACACTTCGCAAAAACAGAGGCCAGTAAAACCTGGAATTATCCCGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR TCA 72 bp TTCCTTTTCCAGAGCATTGTCTCTTGTGCAGATCAATaGAACGAAGCGAAGCTGGATAGACTTTGGAGAGAG +
Preference number: 3 (lower is better)
Translates to: FLFQSIVSCADQ*NEAKLDRLWRE
Trigger: CTCTCTCCAAAGTCTATCCAGCTTCGCTTCGTTTCATTGATCTGCACAAGAGACAATGCTCTGGAAAAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR CCA 72 bp ACTTCATCCTTACCCAAGGTCAAAATATCCTCAAATTaGATAACAGGGAGAAGAGAGGCCAACCAACTCCCT +
Preference number: 3 (lower is better)
Translates to: TSSLPKVKISSN*ITGRREANQLP
Trigger: AGGGAGTTGGTTGGCCTCTCTTCTCCCTGTTATCCAATTTGAGGATATTTTGACCTTGGGTAAGGATGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR TCA 72 bp AAGAGTGAAACTTTATCCCTCATTCATGGGGATCACTaGGCTCCAGATACTAAAACGTCACACTTCAGGGAA +
Preference number: 3 (lower is better)
Translates to: KSETLSLIHGDH*APDTKTSHFRE
Trigger: TTCCCTGAAGTGTGACGTTTTAGTATCTGGAGCTCAGTGATCCCCATGAATGAGGGATAAAGTTTCACTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR TCA 72 bp GGACTTTCCCTAGCACTAGTTAGAAAATACCAAGAGTaGAACTTTATCCCTCATTCATGGGGATCACTGAGC +
Preference number: 3 (lower is better)
Translates to: GLSLALVRKYQE*NFIPHSWGSLS
Trigger: GCTCAGTGATCCCCATGAATGAGGGATAAAGTTTCACTCTTGGTATTTTCTAACTAGTGCTAGGGAAAGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR TCA 72 bp AAACGTCACACTTCAGGGAAACTAGGGAAGAGAGACTaGGTTATGGAAAGGATGCTACCATTTTTCTCAAAG +
Preference number: 3 (lower is better)
Translates to: KRHTSGKLGKRD*VMERMLPFFSK
Trigger: CTTTGAGAAAAATGGTAGCATCCTTTCCATAACTCAGTCTCTCTTCCCTAGTTTCCCTGAAGTGTGACGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR-3UTR CAA 90 bp CATTGGTACTATCTAGGTACACATCTCCTCTCAAAAGATGAGAATATACAGGTGGAGCTCTTGATGGCTTaGCAATTTGTGCAAAGTTCT +
Preference number: 3 (lower is better)
Translates to: HWYYLGTHLLSKDENIQVELLMA*QFVQSS
Trigger: AGAACTTTGCACAAATTGCAAAGCCATCAAGAGCTC...CACCTGTATATTCTCATCTTTTGAGAGGAGATGTGTACCTAGATAGTACCAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp GACAGCGATCCAAAGCTACACGCCAAGGATGGAAGCCAGACCTCTGCGCTCCCCCGAGGTTTGCTCCGCTaGCTGCGGCGCTCGCACGCC +
Preference number: 4 (lower is better)
Translates to: DSDPKLHAKDGSQTSALPRGLLR*LRRSHA
Trigger: GGCGTGCGAGCGCCGCAGCCAGCGGAGCAAACCTCG...GGGGAGCGCAGAGGTCTGGCTTCCATCCTTGGCGTGTAGCTTTGGATCGCTGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR CAA 72 bp CAGAGGCAGAACTGTCCCCAGCTCGTGCCTCTCGGCTaGAAGAACCACCTTCTCCCGGCCCCGGGTTCTCTG +
Preference number: 4 (lower is better)
Translates to: QRQNCPQLVPLG*KNHLLPAPGSL
Trigger: CAGAGAACCCGGGGCCGGGAGAAGGTGGTTCTTCAAGCCGAGAGGCACGAGCTGGGGACAGTTCTGCCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR TCA 90 bp GCAGCCAGAAGAGATGGTGGCAGTAGAAACAAGAGCAGCTCTCATCGCTGGGGGCGCCGGCCGCGATGCTaGCGATGGCTGGCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: AARRDGGSRNKSSSHRWGRRPRC*RWLAGS
Trigger: TGACCCTGCCAGCCATCGTCAGCATCGCGGCCGGCG...CCCCCAGCGATGAGAGCTGCTCTTGTTTCTACTGCCACCATCTCTTCTGGCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR GCA 90 bp TCCACGCTCTCCACAAACCTTCAAGGAAACGCCCCAGGGGCAGTGAATCGTCTCCCAGTCTGGCGCGGATaGCGCTCCTCCCGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: STLSTNLQGNAPGAVNRLPVWRG*RSSRQL
Trigger: GAGCTGCCGGGAGGAGCGGCATCCGCGCCAGACTGG...GAGACGATTCACTGCCCCTGGGGCGTTTCCTTGAAGGTTTGTGGAGAGCGTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR GCA 90 bp GAGGCAGAACTGTCCCCAGCTCGTGCCTCTCGGCTTGAAGAACCACCTTCTCCCGGCACCCCAGCCACCTaGACATGGTGGGCGATCTCG +
Preference number: 4 (lower is better)
Translates to: EAELSPARASRLEEPPSPGTPAT*TWWAIS
Trigger: CGAGATCGCCCACCATGTGCAGGTGGCTGGGGTGCC...GGGAGAAGGTGGTTCTTCAAGCCGAGAGGCACGAGCTGGGGACAGTTCTGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp GAGGCAGAACTGTCCCCAGCTCGTGCCTCTCGGCTTGAAGAACCACCTTCTCCCCAGGGCGGTAGTCCGTaGTCAGAGAGGGTGCCAGGC +
Preference number: 4 (lower is better)
Translates to: EAELSPARASRLEEPPSPQGGSP*SERVPG
Trigger: GCCTGGCACCCTCTCTGACCACGGACTACCGCCCTG...GGGAGAAGGTGGTTCTTCAAGCCGAGAGGCACGAGCTGGGGACAGTTCTGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR TCA 90 bp GAGGCAGAACTGTCCCCAGCTCGTGCCTCTCGGCTTGAAGAACCACCTTCTCCCCGGTTGGCCCTCACATaGTTCCAGCTCGGCGACGTC +
Preference number: 4 (lower is better)
Translates to: EAELSPARASRLEEPPSPRLALT*FQLGDV
Trigger: GACGTCGCCGAGCTGGAATCATGTGAGGGCCAACCG...GGGAGAAGGTGGTTCTTCAAGCCGAGAGGCACGAGCTGGGGACAGTTCTGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR GCA 90 bp GCAGCCAGAAGAGATGGTGGCAGTAGAAACAAGAGCAGCTCTCATCGCTGGGGGCGAGGCCCCTCTCCCTaGCCGCAGCTCGGAATCAGG +
Preference number: 4 (lower is better)
Translates to: AARRDGGSRNKSSSHRWGRGPSP*PQLGIR
Trigger: CCTGATTCCGAGCTGCGGGCAGGGAGAGGGGCCTCG...CCCCCAGCGATGAGAGCTGCTCTTGTTTCTACTGCCACCATCTCTTCTGGCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp GAGGCAGAACTGTCCCCAGCTCGTGCCTCTCGGCTTGAAGAACCACCTTCTCCCGCAGCAGGGGCCAGCTaGAGGGAGTGCTCTCCATTG +
Preference number: 4 (lower is better)
Translates to: EAELSPARASRLEEPPSPAAGAS*RECSPL
Trigger: CAATGGAGAGCACTCCCTCCAGCTGGCCCCTGCTGC...GGGAGAAGGTGGTTCTTCAAGCCGAGAGGCACGAGCTGGGGACAGTTCTGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR TCA 90 bp GAGGCAGAACTGTCCCCAGCTCGTGCCTCTCGGCTTGAAGAACCACCTTCTCCCTGCAGGGCTGCACGATaGGGGGCGGGTAACAAGACT +
Preference number: 4 (lower is better)
Translates to: EAELSPARASRLEEPPSPCRAAR*GAGNKT
Trigger: AGTCTTGTTACCCGCCCCTCATCGTGCAGCCCTGCA...GGGAGAAGGTGGTTCTTCAAGCCGAGAGGCACGAGCTGGGGACAGTTCTGCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR TCA 90 bp GACAGCGATCCAAAGCTACACGCCAAGGATGGAAGCCAGACCTCTGCGCTCCCCTGTCCTCCTACCCCCTaGCTCCAGTGCTGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: DSDPKLHAKDGSQTSALPCPPTP*LQCCLQ
Trigger: CTGCAAGCAGCACTGGAGTCAGGGGGTAGGAGGACA...GGGGAGCGCAGAGGTCTGGCTTCCATCCTTGGCGTGTAGCTTTGGATCGCTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR GCA 90 bp GCAGCCAGAAGAGATGGTGGCAGTAGAAACAAGAGCAGCTCTCATCGCTGGGGGGTTGCCCAGGTAGACTaGCACGCTGCTCCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: AARRDGGSRNKSSSHRWGVAQVD*HAAPSP
Trigger: GGGGCTGGGAGCAGCGTGGCAGTCTACCTGGGCAAC...CCCCCAGCGATGAGAGCTGCTCTTGTTTCTACTGCCACCATCTCTTCTGGCTGC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR GCA 90 bp TCCACGCTCTCCACAAACCTTCAAGGAAACGCCCCAGGGGCAGTGAATCGTCTCTTGAACTCCACGGCGTaGAGGCGGGACTGCTCGGCG +
Preference number: 4 (lower is better)
Translates to: STLSTNLQGNAPGAVNRLLNSTA*RRDCSA
Trigger: CGCCGAGCAGTCCCGCCTGCACGCCGTGGAGTTCAA...GAGACGATTCACTGCCCCTGGGGCGTTTCCTTGAAGGTTTGTGGAGAGCGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR GCA 90 bp GACACTCACAGAGCGCCTTTCCTCTCGATGACTCCCACTGGCTTCTATGGGGCCCGTGCCTGCTCATCCTaGTCTAGGGCCCCGATGAGC +
Preference number: 4 (lower is better)
Translates to: DTHRAPFLSMTPTGFYGARACSS*SRAPMS
Trigger: GCTCATCGGGGCCCTAGAGCAGGATGAGCAGGCACG...GGCCCCATAGAAGCCAGTGGGAGTCATCGAGAGGAAAGGCGCTCTGTGAGTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR GCA 90 bp GACAGCGATCCAAAGCTACACGCCAAGGATGGAAGCCAGACCTCTGCGCTCCCCCCCTCTTCCCAGGAATaGGAGGCTCCTCCTCTCAGC +
Preference number: 4 (lower is better)
Translates to: DSDPKLHAKDGSQTSALPPSSQE*EAPPLS
Trigger: GCTGAGAGGAGGAGCCTCGCATTCCTGGGAAGAGGG...GGGGAGCGCAGAGGTCTGGCTTCCATCCTTGGCGTGTAGCTTTGGATCGCTGTC
61% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp GACAGCGATCCAAAGCTACACGCCAAGGATGGAAGCCAGACCTCTGCGCTCCCCGCCCCCGTCCCTTGGTaGACGGTCAAGTGGTTGAAG +
Preference number: 4 (lower is better)
Translates to: DSDPKLHAKDGSQTSALPAPVPW*TVKWLK
Trigger: CTTCAACCACTTGACCGTCCACCAAGGGACGGGGGC...GGGGAGCGCAGAGGTCTGGCTTCCATCCTTGGCGTGTAGCTTTGGATCGCTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp GAGGCAGAACTGTCCCCAGCTCGTGCCTCTCGGCTTGAAGAACCACCTTCTCCCGATGATGTATTCCCCTaGGAGGGGCGTGCAGGGCAC +
Preference number: 4 (lower is better)
Translates to: EAELSPARASRLEEPPSPDDVFP*EGRAGH
Trigger: GTGCCCTGCACGCCCCTCCCAGGGGAATACATCATC...GGGAGAAGGTGGTTCTTCAAGCCGAGAGGCACGAGCTGGGGACAGTTCTGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp GCAGCCAGAAGAGATGGTGGCAGTAGAAACAAGAGCAGCTCTCATCGCTGGGGGGTACTGGCCCGGAGGTaGTTCCCACGAGGGCATGGC +
Preference number: 4 (lower is better)
Translates to: AARRDGGSRNKSSSHRWGVLARR*FPRGHG
Trigger: GCCATGCCCTCGTGGGAACCACCTCCGGGCCAGTAC...CCCCCAGCGATGAGAGCTGCTCTTGTTTCTACTGCCACCATCTCTTCTGGCTGC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp GACAGCGATCCAAAGCTACACGCCAAGGATGGAAGCCAGACCTCTGCGCTCCCCGGGGTGTGTGGCCACTaGCAATGCTCCACTCTGGCT +
Preference number: 4 (lower is better)
Translates to: DSDPKLHAKDGSQTSALPGVCGH*QCSTLA
Trigger: AGCCAGAGTGGAGCATTGCCAGTGGCCACACACCCC...GGGGAGCGCAGAGGTCTGGCTTCCATCCTTGGCGTGTAGCTTTGGATCGCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp GACACTCACAGAGCGCCTTTCCTCTCGATGACTCCCACTGGCTTCTATGGGGCCCCCACTTTCCAGGTCTaGGGTGATCATCGGGGCCCG +
Preference number: 4 (lower is better)
Translates to: DTHRAPFLSMTPTGFYGAPTFQV*GDHRGP
Trigger: CGGGCCCCGATGATCACCCCAGACCTGGAAAGTGGG...GGCCCCATAGAAGCCAGTGGGAGTCATCGAGAGGAAAGGCGCTCTGTGAGTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp TCCACGCTCTCCACAAACCTTCAAGGAAACGCCCCAGGGGCAGTGAATCGTCTCGCCAGGTGTCTGGTCTaGGAGAGGCCCACCTCACCC +
Preference number: 4 (lower is better)
Translates to: STLSTNLQGNAPGAVNRLARCLV*ERPTSP
Trigger: GGGTGAGGTGGGCCTCTCCCAGACCAGACACCTGGC...GAGACGATTCACTGCCCCTGGGGCGTTTCCTTGAAGGTTTGTGGAGAGCGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp GCAGCCAGAAGAGATGGTGGCAGTAGAAACAAGAGCAGCTCTCATCGCTGGGGGAACCTCGTGGAGGCCTaGCCCACACACCTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: AARRDGGSRNKSSSHRWGNLVEA*PTHLQA
Trigger: GGCCTGGAGGTGTGTGGGCCAGGCCTCCACGAGGTT...CCCCCAGCGATGAGAGCTGCTCTTGTTTCTACTGCCACCATCTCTTCTGGCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp CCCACTGGCTTCTATGGGGCCTTTGGACCTGGGCATGGAGCTTTGGTCTCTTTGGTGGGGAAAGGCAGGTaGGCTCCGGCCCCTAGTCTC +
Preference number: 4 (lower is better)
Translates to: PTGFYGAFGPGHGALVSLVGKGR*APAPSL
Trigger: GAGACTAGGGGCCGGAGCCCACCTGCCTTTCCCCAC...CAAAGAGACCAAAGCTCCATGCCCAGGTCCAAAGGCCCCATAGAAGCCAGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR TCA 90 bp CCCACTGGCTTCTATGGGGCCTTTGGACCTGGGCATGGAGCTTTGGTCTCTTTGCTTTCCGGGCTCCTCTaGCATCAGCAATCCCGGCGC +
Preference number: 4 (lower is better)
Translates to: PTGFYGAFGPGHGALVSLLSGLL*HQQSRR
Trigger: GCGCCGGGATTGCTGATGTCAGAGGAGCCCGGAAAG...CAAAGAGACCAAAGCTCCATGCCCAGGTCCAAAGGCCCCATAGAAGCCAGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR TCA 90 bp GACAGCGATCCAAAGCTACACGCCAAGGATGGAAGCCAGACCTCTGCGCTCCCCTGGGGCTTCCGTCCTTaGGCACAGAGACCATCTCGT +
Preference number: 4 (lower is better)
Translates to: DSDPKLHAKDGSQTSALPWGFRP*AQRPSR
Trigger: ACGAGATGGTCTCTGTGCTCAAGGACGGAAGCCCCA...GGGGAGCGCAGAGGTCTGGCTTCCATCCTTGGCGTGTAGCTTTGGATCGCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR TCA 90 bp GACACTCACAGAGCGCCTTTCCTCTCGATGACTCCCACTGGCTTCTATGGGGCCCAGGTGAGATGCAGATaGCCTGGCTCCCGGACACCT +
Preference number: 4 (lower is better)
Translates to: DTHRAPFLSMTPTGFYGAQVRCR*PGSRTP
Trigger: AGGTGTCCGGGAGCCAGGTCATCTGCATCTCACCTG...GGCCCCATAGAAGCCAGTGGGAGTCATCGAGAGGAAAGGCGCTCTGTGAGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR TCA 90 bp GACAGCGATCCAAAGCTACACGCCAAGGATGGAAGCCAGACCTCTGCGCTCCCCATCCTTGGGCCCAGGTaGGATGCAGATGACCTGGCT +
Preference number: 4 (lower is better)
Translates to: DSDPKLHAKDGSQTSALPILGPR*DADDLA
Trigger: AGCCAGGTCATCTGCATCTCACCTGGGCCCAAGGAT...GGGGAGCGCAGAGGTCTGGCTTCCATCCTTGGCGTGTAGCTTTGGATCGCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR TCA 90 bp GAGGCAGAACTGTCCCCAGCTCGTGCCTCTCGGCTTGAAGAACCACCTTCTCCCCTGAGACTCCCAGTGTaGCAGCTTGGACAGGTCCCT +
Preference number: 4 (lower is better)
Translates to: EAELSPARASRLEEPPSPLRLPV*QLGQVP
Trigger: AGGGACCTGTCCAAGCTGTCACACTGGGAGTCTCAG...GGGAGAAGGTGGTTCTTCAAGCCGAGAGGCACGAGCTGGGGACAGTTCTGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR GCA 90 bp GACAGCGATCCAAAGCTACACGCCAAGGATGGAAGCCAGACCTCTGCGCTCCCCTGTGGCCACTGGCAATaGTCCACTCTGGCTCGATGC +
Preference number: 4 (lower is better)
Translates to: DSDPKLHAKDGSQTSALPCGHWQ*STLARC
Trigger: GCATCGAGCCAGAGTGGAGCATTGCCAGTGGCCACA...GGGGAGCGCAGAGGTCTGGCTTCCATCCTTGGCGTGTAGCTTTGGATCGCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR GCA 90 bp GACACTCACAGAGCGCCTTTCCTCTCGATGACTCCCACTGGCTTCTATGGGGCCGCCCCAGGAGTCTCATaGAAGACACAGCGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: DTHRAPFLSMTPTGFYGAAPGVS*KTQRGW
Trigger: CCAGCCACGCTGTGTCTTGCATGAGACTCCTGGGGC...GGCCCCATAGAAGCCAGTGGGAGTCATCGAGAGGAAAGGCGCTCTGTGAGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp GCTCCCTATTTGTTCTGCCCAGGCCATTCTTCGTCCAGCACTCATCCATTGCTTCCTCCCGCTCCAGTCTaGCGCGGATGCCGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: APYLFCPGHSSSSTHPLLPPAPV*RGCRSS
Trigger: GGAGGAGCGGCATCCGCGCCAGACTGGAGCGGGAGG...AAGCAATGGATGAGTGCTGGACGAAGAATGGCCTGGGCAGAACAAATAGGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp TCCACGCTCTCCACAAACCTTCAAGGAAACGCCCCAGGGGCAGTGAATCGTCTCTGGGGACAGGCGCCTTaGTGCACTGGACGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: STLSTNLQGNAPGAVNRLWGQAP*CTGRPS
Trigger: GGAAGGACGTCCAGTGCACCAAGGCGCCTGTCCCCA...GAGACGATTCACTGCCCCTGGGGCGTTTCCTTGAAGGTTTGTGGAGAGCGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp GACAGCGATCCAAAGCTACACGCCAAGGATGGAAGCCAGACCTCTGCGCTCCCCACGTCCGGGAGATGCTaGCAGAGGCAGGGATGTTGT +
Preference number: 4 (lower is better)
Translates to: DSDPKLHAKDGSQTSALPTSGRC*QRQGCC
Trigger: ACAACATCCCTGCCTCTGCCAGCATCTCCCGGACGT...GGGGAGCGCAGAGGTCTGGCTTCCATCCTTGGCGTGTAGCTTTGGATCGCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR TCA 90 bp GAGGCAGAACTGTCCCCAGCTCGTGCCTCTCGGCTTGAAGAACCACCTTCTCCCGCTGTGCTCAGATACTaGGATGCTGCTGGGATGCAC +
Preference number: 4 (lower is better)
Translates to: EAELSPARASRLEEPPSPAVLRY*DAAGMH
Trigger: GTGCATCCCAGCAGCATCTCAGTATCTGAGCACAGC...GGGAGAAGGTGGTTCTTCAAGCCGAGAGGCACGAGCTGGGGACAGTTCTGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR TCA 90 bp CCCACTGGCTTCTATGGGGCCTTTGGACCTGGGCATGGAGCTTTGGTCTCTTTGCAGGTGGTGGGGTCATaGGTGCAGAGGTTGCGGTAC +
Preference number: 4 (lower is better)
Translates to: PTGFYGAFGPGHGALVSLQVVGS*VQRLRY
Trigger: GTACCGCAACCTCTGCACTCATGACCCCACCACCTG...CAAAGAGACCAAAGCTCCATGCCCAGGTCCAAAGGCCCCATAGAAGCCAGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR TCA 90 bp CCCACTGGCTTCTATGGGGCCTTTGGACCTGGGCATGGAGCTTTGGTCTCTTTGCACCATAGTGCCTCCTaGCTCGGGACCTCGGATTGG +
Preference number: 4 (lower is better)
Translates to: PTGFYGAFGPGHGALVSLHHSAS*LGTSDW
Trigger: CCAATCCGAGGTCCCGAGTCAGGAGGCACTATGGTG...CAAAGAGACCAAAGCTCCATGCCCAGGTCCAAAGGCCCCATAGAAGCCAGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR GCA 90 bp GAGAAGTCATCCACTTGTCCTTCACACTCACAAGTCCGTGAGAGGCAGAAAGAGGGTGGAGGGTGCACCTaGGCTCGCCGCTGCACCAGC +
Preference number: 4 (lower is better)
Translates to: EKSSTCPSHSQVRERQKEGGGCT*ARRCTS
Trigger: GCTGGTGCAGCGGCGAGCGCAGGTGCACCCTCCACC...CTCTTTCTGCCTCTCACGGACTTGTGAGTGTGAAGGACAAGTGGATGACTTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR GCA 90 bp GTCTTGCCAAGCACCCTTCTGGGGTCCTCTTCCTTTTCCAGAGCATTGTCTCTTAGTGCTGGTGGAGGGTaGACCTGCGCTCGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: VLPSTLLGSSSFSRALSLSAGGG*TCARRC
Trigger: GCAGCGGCGAGCGCAGGTGCACCCTCCACCAGCACT...AAGAGACAATGCTCTGGAAAAGGAAGAGGACCCCAGAAGGGTGCTTGGCAAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR GCA 90 bp GACACTCACAGAGCGCCTTTCCTCTCGATGACTCCCACTGGCTTCTATGGGGCCGGTAGACTGCCACGCTaGTCCCAGCCCCAAGGTAAT +
Preference number: 4 (lower is better)
Translates to: DTHRAPFLSMTPTGFYGAGRLPR*SQPQGN
Trigger: ATTACCTTGGGGCTGGGAGCAGCGTGGCAGTCTACC...GGCCCCATAGAAGCCAGTGGGAGTCATCGAGAGGAAAGGCGCTCTGTGAGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR GCA 90 bp CCCACTGGCTTCTATGGGGCCTTTGGACCTGGGCATGGAGCTTTGGTCTCTTTGTCCACTCTGGCTCGATaGGCTGGACCCGAGGGTCAT +
Preference number: 4 (lower is better)
Translates to: PTGFYGAFGPGHGALVSLSTLAR*AGPEGH
Trigger: ATGACCCTCGGGTCCAGCGCATCGAGCCAGAGTGGA...CAAAGAGACCAAAGCTCCATGCCCAGGTCCAAAGGCCCCATAGAAGCCAGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR GCA 90 bp GACACTCACAGAGCGCCTTTCCTCTCGATGACTCCCACTGGCTTCTATGGGGCCCAAGTCCATGTCCACTaGCCTCGGCCGCTGGGAATA +
Preference number: 4 (lower is better)
Translates to: DTHRAPFLSMTPTGFYGAQVHVH*PRPLGI
Trigger: TATTCCCAGCGGCCGAGGGCAGTGGACATGGACTTG...GGCCCCATAGAAGCCAGTGGGAGTCATCGAGAGGAAAGGCGCTCTGTGAGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR GCA 90 bp GCAGCCAGAAGAGATGGTGGCAGTAGAAACAAGAGCAGCTCTCATCGCTGGGGGAAGCACCTGACCCCATaGAGAGGACGGGAGGCAGCA +
Preference number: 4 (lower is better)
Translates to: AARRDGGSRNKSSSHRWGKHLTP*RGREAA
Trigger: TGCTGCCTCCCGTCCTCTGCATGGGGTCAGGTGCTT...CCCCCAGCGATGAGAGCTGCTCTTGTTTCTACTGCCACCATCTCTTCTGGCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp TCCACGCTCTCCACAAACCTTCAAGGAAACGCCCCAGGGGCAGTGAATCGTCTCGGGGCAGCTTCCGGCTaGACAGGGTCGGGAAGTAAT +
Preference number: 4 (lower is better)
Translates to: STLSTNLQGNAPGAVNRLGAASG*TGSGSN
Trigger: ATTACTTCCCGACCCTGTCCAGCCGGAAGCTGCCCC...GAGACGATTCACTGCCCCTGGGGCGTTTCCTTGAAGGTTTGTGGAGAGCGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp GACAGCGATCCAAAGCTACACGCCAAGGATGGAAGCCAGACCTCTGCGCTCCCCCGCCTTAAGGGTGATTaGCTTTACCTCCCCGACTGG +
Preference number: 4 (lower is better)
Translates to: DSDPKLHAKDGSQTSALPRLKGD*LYLPDW
Trigger: CCAGTCGGGGAGGTAAAGCCAATCACCCTTAAGGCG...GGGGAGCGCAGAGGTCTGGCTTCCATCCTTGGCGTGTAGCTTTGGATCGCTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp GAGGCAGAACTGTCCCCAGCTCGTGCCTCTCGGCTTGAAGAACCACCTTCTCCCGTTCCCACGAGGGCATaGCCCATCTCACAGACAATC +
Preference number: 4 (lower is better)
Translates to: EAELSPARASRLEEPPSPVPTRA*PISQTI
Trigger: GATTGTCTGTGAGATGGGCCATGCCCTCGTGGGAAC...GGGAGAAGGTGGTTCTTCAAGCCGAGAGGCACGAGCTGGGGACAGTTCTGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp TCCACGCTCTCCACAAACCTTCAAGGAAACGCCCCAGGGGCAGTGAATCGTCTCGGGGACAGCAAGCTCTaGGGCCTGATCCCCATCACT +
Preference number: 4 (lower is better)
Translates to: STLSTNLQGNAPGAVNRLGDSKL*GLIPIT
Trigger: AGTGATGGGGATCAGGCCCCAGAGCTTGCTGTCCCC...GAGACGATTCACTGCCCCTGGGGCGTTTCCTTGAAGGTTTGTGGAGAGCGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp GAGGCAGAACTGTCCCCAGCTCGTGCCTCTCGGCTTGAAGAACCACCTTCTCCCTATATGAGCGAAGGGTaGTCTCCCCTCTCCAGGCAC +
Preference number: 4 (lower is better)
Translates to: EAELSPARASRLEEPPSPYMSEG*SPLSRH
Trigger: GTGCCTGGAGAGGGGAGACCACCCTTCGCTCATATA...GGGAGAAGGTGGTTCTTCAAGCCGAGAGGCACGAGCTGGGGACAGTTCTGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp GACACTCACAGAGCGCCTTTCCTCTCGATGACTCCCACTGGCTTCTATGGGGCCTCCCACTGGCTTCTATaGGGCCTTTGGACCTGGGCA +
Preference number: 4 (lower is better)
Translates to: DTHRAPFLSMTPTGFYGASHWLL*GLWTWA
Trigger: TGCCCAGGTCCAAAGGCCCCATAGAAGCCAGTGGGA...GGCCCCATAGAAGCCAGTGGGAGTCATCGAGAGGAAAGGCGCTCTGTGAGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR TCA 90 bp CCCACTGGCTTCTATGGGGCCTTTGGACCTGGGCATGGAGCTTTGGTCTCTTTGGCTCGCCCTCTCGGCTaGAAAATTCCCAGCAACTGC +
Preference number: 4 (lower is better)
Translates to: PTGFYGAFGPGHGALVSLARPLG*KIPSNC
Trigger: GCAGTTGCTGGGAATTTTTCAGCCGAGAGGGCGAGC...CAAAGAGACCAAAGCTCCATGCCCAGGTCCAAAGGCCCCATAGAAGCCAGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR TCA 90 bp GACAGCGATCCAAAGCTACACGCCAAGGATGGAAGCCAGACCTCTGCGCTCCCCGGACGGTCAAGTGGTTaGAGGTCCAGTCACGATTCT +
Preference number: 4 (lower is better)
Translates to: DSDPKLHAKDGSQTSALPGRSSG*RSSHDS
Trigger: AGAATCGTGACTGGACCTTCAACCACTTGACCGTCC...GGGGAGCGCAGAGGTCTGGCTTCCATCCTTGGCGTGTAGCTTTGGATCGCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR TCA 90 bp GACACTCACAGAGCGCCTTTCCTCTCGATGACTCCCACTGGCTTCTATGGGGCCCAGGGCCAGGGTGTCTaGAGGGATCTTGATGAGAGA +
Preference number: 4 (lower is better)
Translates to: DTHRAPFLSMTPTGFYGAQGQGV*RDLDER
Trigger: TCTCTCATCAAGATCCCTTCAGACACCCTGGCCCTG...GGCCCCATAGAAGCCAGTGGGAGTCATCGAGAGGAAAGGCGCTCTGTGAGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR TCA 90 bp CAAGCACCCTTCTGGGGTCCTCTTCCTTTTCCAGAGCATTGTCTCTTGTGCAGATCCCCAGCAGCCAGTTaGGCTCCAGGTTGCCCTCGC +
Preference number: 4 (lower is better)
Translates to: QAPFWGPLPFPEHCLLCRSPAAS*APGCPR
Trigger: GCGAGGGCAACCTGGAGCTCAACTGGCTGCTGGGGA...TCTGCACAAGAGACAATGCTCTGGAAAAGGAAGAGGACCCCAGAAGGGTGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR TCA 90 bp CCCACTGGCTTCTATGGGGCCTTTGGACCTGGGCATGGAGCTTTGGTCTCTTTGCGTATACTGCTCACATaGCTCCACGGGGACCCTGGT +
Preference number: 4 (lower is better)
Translates to: PTGFYGAFGPGHGALVSLRILLT*LHGDPG
Trigger: ACCAGGGTCCCCGTGGAGTCATGTGAGCAGTATACG...CAAAGAGACCAAAGCTCCATGCCCAGGTCCAAAGGCCCCATAGAAGCCAGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR TCA 90 bp GCAGCCAGAAGAGATGGTGGCAGTAGAAACAAGAGCAGCTCTCATCGCTGGGGGGGTCAGCAAGCTGTCTaGGATGACACTCACCGAGCC +
Preference number: 4 (lower is better)
Translates to: AARRDGGSRNKSSSHRWGGQQAV*DDTHRA
Trigger: GGCTCGGTGAGTGTCATCTCAGACAGCTTGCTGACC...CCCCCAGCGATGAGAGCTGCTCTTGTTTCTACTGCCACCATCTCTTCTGGCTGC
58% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR TCA 90 bp TCCACGCTCTCCACAAACCTTCAAGGAAACGCCCCAGGGGCAGTGAATCGTCTCAGGAGTCGTATCTGCTaGTGGACGTCCGGGAGATGC +
Preference number: 4 (lower is better)
Translates to: STLSTNLQGNAPGAVNRLRSRIC*WTSGRC
Trigger: GCATCTCCCGGACGTCCATCAGCAGATACGACTCCT...GAGACGATTCACTGCCCCTGGGGCGTTTCCTTGAAGGTTTGTGGAGAGCGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR TCA 90 bp TTCTTCGTCCAGCACTCATCCATTGCTTCTGTTTCACGCTCAGCAGGGCCAGGGTCGTGCCTCTCGGCTTaGAGAACCACCTTCTCCCGG +
Preference number: 4 (lower is better)
Translates to: FFVQHSSIASVSRSAGPGSCLSA*RTTFSR
Trigger: CCGGGAGAAGGTGGTTCTTCAAGCCGAGAGGCACGA...CCCTGGCCCTGCTGAGCGTGAAACAGAAGCAATGGATGAGTGCTGGACGAAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR TCA 90 bp CCTCTGTCTTGCCAAGCACCCTTCTGGGGTCCTCTTCCTTTTCCAGAGCATTGTGCCTGGATGCCAGTCTaGGCAGCCATGCGGCCAGAA +
Preference number: 4 (lower is better)
Translates to: PLSCQAPFWGPLPFPEHCAWMPV*AAMRPE
Trigger: TTCTGGCCGCATGGCTGCTCAGACTGGCATCCAGGC...ACAATGCTCTGGAAAAGGAAGAGGACCCCAGAAGGGTGCTTGGCAAGACAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR GCA 90 bp GACACTCACAGAGCGCCTTTCCTCTCGATGACTCCCACTGGCTTCTATGGGGCCATCTATTTCGAGGTTTaGTCCGCTGGCTGCGGCGCT +
Preference number: 4 (lower is better)
Translates to: DTHRAPFLSMTPTGFYGAIYFEV*SAGCGA
Trigger: AGCGCCGCAGCCAGCGGAGCAAACCTCGAAATAGAT...GGCCCCATAGAAGCCAGTGGGAGTCATCGAGAGGAAAGGCGCTCTGTGAGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR GCA 90 bp GCAGCCAGAAGAGATGGTGGCAGTAGAAACAAGAGCAGCTCTCATCGCTGGGGGAGGTCATGCGGTCCCTaGTGGTGGTGTACAGGGTCA +
Preference number: 4 (lower is better)
Translates to: AARRDGGSRNKSSSHRWGRSCGP*WWCTGS
Trigger: TGACCCTGTACACCACCAGCAGGGACCGCATGACCT...CCCCCAGCGATGAGAGCTGCTCTTGTTTCTACTGCCACCATCTCTTCTGGCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR GCA 90 bp TCCACGCTCTCCACAAACCTTCAAGGAAACGCCCCAGGGGCAGTGAATCGTCTCGCCTTCTCCACGTGCTaGTGCCCGTTTCCTTGTACC +
Preference number: 4 (lower is better)
Translates to: STLSTNLQGNAPGAVNRLAFSTC*CPFPCT
Trigger: GGTACAAGGAAACGGGCAGCAGCACGTGGAGAAGGC...GAGACGATTCACTGCCCCTGGGGCGTTTCCTTGAAGGTTTGTGGAGAGCGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR GCA 90 bp GCAGCCAGAAGAGATGGTGGCAGTAGAAACAAGAGCAGCTCTCATCGCTGGGGGGTGATGTCCTCATCTTaGAGCACGACCCGGGCGATC +
Preference number: 4 (lower is better)
Translates to: AARRDGGSRNKSSSHRWGVMSSS*STTRAI
Trigger: GATCGCCCGGGTCGTGCTGCAAGATGAGGACATCAC...CCCCCAGCGATGAGAGCTGCTCTTGTTTCTACTGCCACCATCTCTTCTGGCTGC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR GCA 90 bp GACACTCACAGAGCGCCTTTCCTCTCGATGACTCCCACTGGCTTCTATGGGGCCAGACCGGGCAACGTCTaGTGTGTGGTTAGACAGCGA +
Preference number: 4 (lower is better)
Translates to: DTHRAPFLSMTPTGFYGARPGNV*CVVRQR
Trigger: TCGCTGTCTAACCACACAGCAGACGTTGCCCGGTCT...GGCCCCATAGAAGCCAGTGGGAGTCATCGAGAGGAAAGGCGCTCTGTGAGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR GCA 90 bp GAGGCAGAACTGTCCCCAGCTCGTGCCTCTCGGCTTGAAGAACCACCTTCTCCCAAGCAGCAGGTGAAGTaGAGCCAGAAGAGATGGTGG +
Preference number: 4 (lower is better)
Translates to: EAELSPARASRLEEPPSPKQQVK*SQKRWW
Trigger: CCACCATCTCTTCTGGCTGCACTTCACCTGCTGCTT...GGGAGAAGGTGGTTCTTCAAGCCGAGAGGCACGAGCTGGGGACAGTTCTGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR GCA 90 bp GACAGCGATCCAAAGCTACACGCCAAGGATGGAAGCCAGACCTCTGCGCTCCCCGCTCCCTATTTGTTCTaGCCAGGCCATTCTTCGTCC +
Preference number: 4 (lower is better)
Translates to: DSDPKLHAKDGSQTSALPAPYLF*PGHSSS
Trigger: GGACGAAGAATGGCCTGGGCAGAACAAATAGGGAGC...GGGGAGCGCAGAGGTCTGGCTTCCATCCTTGGCGTGTAGCTTTGGATCGCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp GACAGCGATCCAAAGCTACACGCCAAGGATGGAAGCCAGACCTCTGCGCTCCCCTGGTGGACGGTCAAGTaGTTGAAGGTCCAGTCACGA +
Preference number: 4 (lower is better)
Translates to: DSDPKLHAKDGSQTSALPWWTVK*LKVQSR
Trigger: TCGTGACTGGACCTTCAACCACTTGACCGTCCACCA...GGGGAGCGCAGAGGTCTGGCTTCCATCCTTGGCGTGTAGCTTTGGATCGCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp GAGGCAGAACTGTCCCCAGCTCGTGCCTCTCGGCTTGAAGAACCACCTTCTCCCCTCCTTCTTGTGGGATaGCTCCACCAGGATGAAGAG +
Preference number: 4 (lower is better)
Translates to: EAELSPARASRLEEPPSPLLLVG*LHQDEE
Trigger: CTCTTCATCCTGGTGGAGCCATCCCACAAGAAGGAG...GGGAGAAGGTGGTTCTTCAAGCCGAGAGGCACGAGCTGGGGACAGTTCTGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp GACACTCACAGAGCGCCTTTCCTCTCGATGACTCCCACTGGCTTCTATGGGGCCGCTCATAGTCGAGCATaGCTGAGGACTCAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: DTHRAPFLSMTPTGFYGAAHSRA*LRTQGL
Trigger: GAGACCCTGAGTCCTCAGCCATGCTCGACTATGAGC...GGCCCCATAGAAGCCAGTGGGAGTCATCGAGAGGAAAGGCGCTCTGTGAGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp CCCACTGGCTTCTATGGGGCCTTTGGACCTGGGCATGGAGCTTTGGTCTCTTTGCGGTACTTGCACCAATaGCAGCGGAAGGCGCTGTTG +
Preference number: 4 (lower is better)
Translates to: PTGFYGAFGPGHGALVSLRYLHQ*QRKALL
Trigger: CAACAGCGCCTTCCGCTGCCATTGGTGCAAGTACCG...CAAAGAGACCAAAGCTCCATGCCCAGGTCCAAAGGCCCCATAGAAGCCAGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp GTCTTGCCAAGCACCCTTCTGGGGTCCTCTTCCTTTTCCAGAGCATTGTCTCTTGGGCTGGTACAGTGCTaGTGGAGGGTGCACCTGCGC +
Preference number: 4 (lower is better)
Translates to: VLPSTLLGSSSFSRALSLGLVQC*WRVHLR
Trigger: GCGCAGGTGCACCCTCCACCAGCACTGTACCAGCCC...AAGAGACAATGCTCTGGAAAAGGAAGAGGACCCCAGAAGGGTGCTTGGCAAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp CCTCTGTCTTGCCAAGCACCCTTCTGGGGTCCTCTTCCTTTTCCAGAGCATTGTAGGGGCTGGAAGGGCTaGTACAGTGCTGGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: PLSCQAPFWGPLPFPEHCRGWKG*YSAGGG
Trigger: CCCTCCACCAGCACTGTACCAGCCCTTCCAGCCCCT...ACAATGCTCTGGAAAAGGAAGAGGACCCCAGAAGGGTGCTTGGCAAGACAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp GACAGCGATCCAAAGCTACACGCCAAGGATGGAAGCCAGACCTCTGCGCTCCCCAGGTTGCTATCCACATaGGCTCGGTCGACACTCACA +
Preference number: 4 (lower is better)
Translates to: DSDPKLHAKDGSQTSALPRLLST*ARSTLT
Trigger: TGTGAGTGTCGACCGAGCCCATGTGGATAGCAACCT...GGGGAGCGCAGAGGTCTGGCTTCCATCCTTGGCGTGTAGCTTTGGATCGCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp GCTCCCTATTTGTTCTGCCCAGGCCATTCTTCGTCCAGCACTCATCCATTGCTTCGGGCGATCCGGCCTTaGCGCCACTCCAAGTCCATG +
Preference number: 4 (lower is better)
Translates to: APYLFCPGHSSSSTHPLLRAIRP*RHSKSM
Trigger: CATGGACTTGGAGTGGCGCCAAGGCCGGATCGCCCG...AAGCAATGGATGAGTGCTGGACGAAGAATGGCCTGGGCAGAACAAATAGGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp GTCTTGCCAAGCACCCTTCTGGGGTCCTCTTCCTTTTCCAGAGCATTGTCTCTTGGGCTGCCAGGTGTCTaGTCTGGGAGAGGCCCACCT +
Preference number: 4 (lower is better)
Translates to: VLPSTLLGSSSFSRALSLGLPGV*SGRGPP
Trigger: AGGTGGGCCTCTCCCAGACCAGACACCTGGCAGCCC...AAGAGACAATGCTCTGGAAAAGGAAGAGGACCCCAGAAGGGTGCTTGGCAAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR TCA 90 bp GGCCTTTGGACCTGGGCATGGAGCTTTGGTCTCTTTGTTTGGAATCTACACTCACGGCGGTGTCTCTCCTaGGGAAGAAGCAGAGCCCCG +
Preference number: 4 (lower is better)
Translates to: GLWTWAWSFGLFVWNLHSRRCLS*GRSRAP
Trigger: CGGGGCTCTGCTTCTTCCTCAGGAGAGACACCGCCG...TGAGTGTAGATTCCAAACAAAGAGACCAAAGCTCCATGCCCAGGTCCAAAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR TCA 90 bp GACACTCACAGAGCGCCTTTCCTCTCGATGACTCCCACTGGCTTCTATGGGGCCGATGGGACTTCGTCATaGACTCTGGCTTACACTCGC +
Preference number: 4 (lower is better)
Translates to: DTHRAPFLSMTPTGFYGADGTSS*TLAYTR
Trigger: GCGAGTGTAAGCCAGAGTTCATGACGAAGTCCCATC...GGCCCCATAGAAGCCAGTGGGAGTCATCGAGAGGAAAGGCGCTCTGTGAGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR TCA 90 bp GGCCTTTGGACCTGGGCATGGAGCTTTGGTCTCTTTGTTTGGAATCTACACTCATTTCCAGGTCTGGGGTaGTCATCGGGGCCCGGGACC +
Preference number: 4 (lower is better)
Translates to: GLWTWAWSFGLFVWNLHSFPGLG*SSGPGT
Trigger: GGTCCCGGGCCCCGATGATCACCCCAGACCTGGAAA...TGAGTGTAGATTCCAAACAAAGAGACCAAAGCTCCATGCCCAGGTCCAAAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR TCA 90 bp TCCACGCTCTCCACAAACCTTCAAGGAAACGCCCCAGGGGCAGTGAATCGTCTCTCCAGTCAGCCAGGGTaGGCTCTTGATGGCTTTGCA +
Preference number: 4 (lower is better)
Translates to: STLSTNLQGNAPGAVNRLSSQPG*ALDGFA
Trigger: TGCAAAGCCATCAAGAGCTCACCCTGGCTGACTGGA...GAGACGATTCACTGCCCCTGGGGCGTTTCCTTGAAGGTTTGTGGAGAGCGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR GCA 90 bp GACACTCACAGAGCGCCTTTCCTCTCGATGACTCCCACTGGCTTCTATGGGGCCCAGATACTGAGATGCTaGTGGGATGCACTGCAAGGC +
Preference number: 4 (lower is better)
Translates to: DTHRAPFLSMTPTGFYGAQILRC*WDALQG
Trigger: GCCTTGCAGTGCATCCCAGCAGCATCTCAGTATCTG...GGCCCCATAGAAGCCAGTGGGAGTCATCGAGAGGAAAGGCGCTCTGTGAGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR GCA 90 bp GCAGCCAGAAGAGATGGTGGCAGTAGAAACAAGAGCAGCTCTCATCGCTGGGGGCAGCAAAAGCTTCCTTaGACTCCAAGGCCACACGGG +
Preference number: 4 (lower is better)
Translates to: AARRDGGSRNKSSSHRWGQQKLP*TPRPHG
Trigger: CCCGTGTGGCCTTGGAGTGCAAGGAAGCTTTTGCTG...CCCCCAGCGATGAGAGCTGCTCTTGTTTCTACTGCCACCATCTCTTCTGGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR GCA 90 bp GACACTCACAGAGCGCCTTTCCTCTCGATGACTCCCACTGGCTTCTATGGGGCCGTGTCATGGATGCTGTaGCTGTCTGCCTGCTCATCT +
Preference number: 4 (lower is better)
Translates to: DTHRAPFLSMTPTGFYGAVSWML*LSACSS
Trigger: AGATGAGCAGGCAGACAGGCACAGCATCCATGACAC...GGCCCCATAGAAGCCAGTGGGAGTCATCGAGAGGAAAGGCGCTCTGTGAGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR GCA 90 bp GACACTCACAGAGCGCCTTTCCTCTCGATGACTCCCACTGGCTTCTATGGGGCCCCAGTCCCACACCTTTaGTTCCACTTGTCCTCCTAC +
Preference number: 4 (lower is better)
Translates to: DTHRAPFLSMTPTGFYGAPVPHL*FHLSSY
Trigger: GTAGGAGGACAAGTGGAAGCAAAGGTGTGGGACTGG...GGCCCCATAGAAGCCAGTGGGAGTCATCGAGAGGAAAGGCGCTCTGTGAGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR GCA 90 bp GACACTCACAGAGCGCCTTTCCTCTCGATGACTCCCACTGGCTTCTATGGGGCCCCTCCAATTGGCCATTaGCCCATCATTCTCCACGCT +
Preference number: 4 (lower is better)
Translates to: DTHRAPFLSMTPTGFYGAPPIGH*PIILHA
Trigger: AGCGTGGAGAATGATGGGGCAATGGCCAATTGGAGG...GGCCCCATAGAAGCCAGTGGGAGTCATCGAGAGGAAAGGCGCTCTGTGAGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR GCA 90 bp GAGGCAGAACTGTCCCCAGCTCGTGCCTCTCGGCTTGAAGAACCACCTTCTCCCCCAGCACTCATCCATTaGTTCTGTTTCACGCTCAGC +
Preference number: 4 (lower is better)
Translates to: EAELSPARASRLEEPPSPPALIH*FCFTLS
Trigger: GCTGAGCGTGAAACAGAAGCAATGGATGAGTGCTGG...GGGAGAAGGTGGTTCTTCAAGCCGAGAGGCACGAGCTGGGGACAGTTCTGCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR GCA 90 bp GACAGCGATCCAAAGCTACACGCCAAGGATGGAAGCCAGACCTCTGCGCTCCCCGCCTGCCACCTTCCATaGCAAGATGAAGGCCAAATA +
Preference number: 4 (lower is better)
Translates to: DSDPKLHAKDGSQTSALPACHLP*QDEGQI
Trigger: TATTTGGCCTTCATCTTGGCATGGAAGGTGGCAGGC...GGGGAGCGCAGAGGTCTGGCTTCCATCCTTGGCGTGTAGCTTTGGATCGCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp GCTCCCTATTTGTTCTGCCCAGGCCATTCTTCGTCCAGCACTCATCCATTGCTTACGGCCCCCGTCCCTTaGTGGACGGTCAAGTGGTTG +
Preference number: 4 (lower is better)
Translates to: APYLFCPGHSSSSTHPLLTAPVP*WTVKWL
Trigger: CAACCACTTGACCGTCCACCAAGGGACGGGGGCCGT...AAGCAATGGATGAGTGCTGGACGAAGAATGGCCTGGGCAGAACAAATAGGGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp GACACTCACAGAGCGCCTTTCCTCTCGATGACTCCCACTGGCTTCTATGGGGCCGCAAGGCTCACACACTaGCTGATGCTGGCAGCAAAT +
Preference number: 4 (lower is better)
Translates to: DTHRAPFLSMTPTGFYGAARLTH*LMLAAN
Trigger: ATTTGCTGCCAGCATCAGCCAGTGTGTGAGCCTTGC...GGCCCCATAGAAGCCAGTGGGAGTCATCGAGAGGAAAGGCGCTCTGTGAGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp GCTCCCTATTTGTTCTGCCCAGGCCATTCTTCGTCCAGCACTCATCCATTGCTTCTGGTACAGTGCTGGTaGAGGGTGCACCTGCGCTCG +
Preference number: 4 (lower is better)
Translates to: APYLFCPGHSSSSTHPLLLVQCW*RVHLRS
Trigger: CGAGCGCAGGTGCACCCTCCACCAGCACTGTACCAG...AAGCAATGGATGAGTGCTGGACGAAGAATGGCCTGGGCAGAACAAATAGGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp TCCACGCTCTCCACAAACCTTCAAGGAAACGCCCCAGGGGCAGTGAATCGTCTCGAGCACTTGACATTGTaGCTGGACCAGTCGAGCCAG +
Preference number: 4 (lower is better)
Translates to: STLSTNLQGNAPGAVNRLEHLTL*LDQSSQ
Trigger: CTGGCTCGACTGGTCCAGCCACAATGTCAAGTGCTC...GAGACGATTCACTGCCCCTGGGGCGTTTCCTTGAAGGTTTGTGGAGAGCGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp CCCACTGGCTTCTATGGGGCCTTTGGACCTGGGCATGGAGCTTTGGTCTCTTTGGGCTCGCAGAGAAGCTaGGTCTCAGATACGGTGACA +
Preference number: 4 (lower is better)
Translates to: PTGFYGAFGPGHGALVSLGSQRS*VSDTVT
Trigger: TGTCACCGTATCTGAGACCCAGCTTCTCTGCGAGCC...CAAAGAGACCAAAGCTCCATGCCCAGGTCCAAAGGCCCCATAGAAGCCAGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp GAGAAGTCATCCACTTGTCCTTCACACTCACAAGTCCGTGAGAGGCAGAAAGAGGCAGGGTGCCCTTGGTaGCCAGTAGCCGGGTCAGGT +
Preference number: 4 (lower is better)
Translates to: EKSSTCPSHSQVRERQKEAGCPW*PVAGSG
Trigger: ACCTGACCCGGCTACTGGCCACCAAGGGCACCCTGC...CTCTTTCTGCCTCTCACGGACTTGTGAGTGTGAAGGACAAGTGGATGACTTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp GTCTTGCCAAGCACCCTTCTGGGGTCCTCTTCCTTTTCCAGAGCATTGTCTCTTTCTGCAGGGTGCCCTTaGTGGCCAGTAGCCGGGTCA +
Preference number: 4 (lower is better)
Translates to: VLPSTLLGSSSFSRALSLSAGCP*WPVAGS
Trigger: TGACCCGGCTACTGGCCACCAAGGGCACCCTGCAGA...AAGAGACAATGCTCTGGAAAAGGAAGAGGACCCCAGAAGGGTGCTTGGCAAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp GACACTCACAGAGCGCCTTTCCTCTCGATGACTCCCACTGGCTTCTATGGGGCCCTTCTATGGGGCCTTTaGACCTGGGCATGGAGCTTT +
Preference number: 4 (lower is better)
Translates to: DTHRAPFLSMTPTGFYGALLWGL*TWAWSF
Trigger: AAAGCTCCATGCCCAGGTCCAAAGGCCCCATAGAAG...GGCCCCATAGAAGCCAGTGGGAGTCATCGAGAGGAAAGGCGCTCTGTGAGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp CCCACTGGCTTCTATGGGGCCTTTGGACCTGGGCATGGAGCTTTGGTCTCTTTGCTCGATGACTCCCACTaGCTTCTATGGGGCCTTTGG +
Preference number: 4 (lower is better)
Translates to: PTGFYGAFGPGHGALVSLLDDSH*LLWGLW
Trigger: CCAAAGGCCCCATAGAAGCCAGTGGGAGTCATCGAG...CAAAGAGACCAAAGCTCCATGCCCAGGTCCAAAGGCCCCATAGAAGCCAGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp GACAGCGATCCAAAGCTACACGCCAAGGATGGAAGCCAGACCTCTGCGCTCCCCGCAACGTCTGCTGTGTaGTTAGACAGCGATCCAAAG +
Preference number: 4 (lower is better)
Translates to: DSDPKLHAKDGSQTSALPATSAV*LDSDPK
Trigger: CTTTGGATCGCTGTCTAACCACACAGCAGACGTTGC...GGGGAGCGCAGAGGTCTGGCTTCCATCCTTGGCGTGTAGCTTTGGATCGCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp TCCACGCTCTCCACAAACCTTCAAGGAAACGCCCCAGGGGCAGTGAATCGTCTCCAAAGCGAAGAGGTGTaGAGGAGGAACAGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: STLSTNLQGNAPGAVNRLQSEEV*RRNRWA
Trigger: TGCCCACCTGTTCCTCCTCCACACCTCTTCGCTTTG...GAGACGATTCACTGCCCCTGGGGCGTTTCCTTGAAGGTTTGTGGAGAGCGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp GACACTCACAGAGCGCCTTTCCTCTCGATGACTCCCACTGGCTTCTATGGGGCCTCATCGCTGGGGGAATaGCCCCAGAATAAGGTAAGG +
Preference number: 4 (lower is better)
Translates to: DTHRAPFLSMTPTGFYGASSLGE*PQNKVR
Trigger: CCTTACCTTATTCTGGGGCCATTCCCCCAGCGATGA...GGCCCCATAGAAGCCAGTGGGAGTCATCGAGAGGAAAGGCGCTCTGTGAGTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp CCCACTGGCTTCTATGGGGCCTTTGGACCTGGGCATGGAGCTTTGGTCTCTTTGAGCAGCTCTCATCGCTaGGGGAATGGCCCCAGAATA +
Preference number: 4 (lower is better)
Translates to: PTGFYGAFGPGHGALVSLSSSHR*GNGPRI
Trigger: TATTCTGGGGCCATTCCCCCAGCGATGAGAGCTGCT...CAAAGAGACCAAAGCTCCATGCCCAGGTCCAAAGGCCCCATAGAAGCCAGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp GCAGCCAGAAGAGATGGTGGCAGTAGAAACAAGAGCAGCTCTCATCGCTGGGGGAAAGACGGCCTCTCCTaGAGCAGCTGCTGGATCAGT +
Preference number: 4 (lower is better)
Translates to: AARRDGGSRNKSSSHRWGKDGLS*SSCWIS
Trigger: ACTGATCCAGCAGCTGCTCCAGGAGAGGCCGTCTTT...CCCCCAGCGATGAGAGCTGCTCTTGTTTCTACTGCCACCATCTCTTCTGGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR CAA 72 bp TCCTACCCCCTGACTCCAGTGCTGCTTGCAGAACAGTaGGAGCTGGCTGCTCGGATCCAAGGTAATGTGGGA +
Preference number: 4 (lower is better)
Translates to: SYPLTPVLLAEQ*ELAARIQGNVG
Trigger: TCCCACATTACCTTGGATCCGAGCAGCCAGCTCCAACTGTTCTGCAAGCAGCACTGGAGTCAGGGGGTAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR CAA 72 bp CATGTGGTCAGCAGGGCCTTTGGAAATTGGAACCACTaGGAGGTAAAGCAGGGCACGGAGAAGCTGGAGCCC +
Preference number: 4 (lower is better)
Translates to: HVVSRAFGNWNH*EVKQGTEKLEP
Trigger: GGGCTCCAGCTTCTCCGTGCCCTGCTTTACCTCCAAGTGGTTCCAATTTCCAAAGGCCCTGCTGACCACATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR CAA 72 bp GCTCCGGCTCTTCACTCTCCACCCTCCAATTGGCCATaGCCCCATCATTCTCCACGCTCTCCACAAACCTTC +
Preference number: 4 (lower is better)
Translates to: APALHSPPSNWP*PHHSPRSPQTF
Trigger: GAAGGTTTGTGGAGAGCGTGGAGAATGATGGGGCAATGGCCAATTGGAGGGTGGAGAGTGAAGAGCCGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR CAA 72 bp TTCTGCCCAGGCCATTCTTCGTCCAGCACTCATCCATaGCTTCTGTTTCACGCTCAGCAGGGCCAGGGGTCT +
Preference number: 4 (lower is better)
Translates to: FCPGHSSSSTHP*LLFHAQQGQGS
Trigger: AGACCCCTGGCCCTGCTGAGCGTGAAACAGAAGCAATGGATGAGTGCTGGACGAAGAATGGCCTGGGCAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR TCA 90 bp GCTCCCTATTTGTTCTGCCCAGGCCATTCTTCGTCCAGCACTCATCCATTGCTTCCACAGCCGTGCCGATaGAGAGCTTGCCATCCTCAC +
Preference number: 4 (lower is better)
Translates to: APYLFCPGHSSSSTHPLLPQPCR*RACHPH
Trigger: GTGAGGATGGCAAGCTCTTCATCGGCACGGCTGTGG...AAGCAATGGATGAGTGCTGGACGAAGAATGGCCTGGGCAGAACAAATAGGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR TCA 90 bp GCTCCCTATTTGTTCTGCCCAGGCCATTCTTCGTCCAGCACTCATCCATTGCTTATAGTCGAGCATGGCTaGGGACTCAGGGTCTCGGGG +
Preference number: 4 (lower is better)
Translates to: APYLFCPGHSSSSTHPLLIVEHG*GLRVSG
Trigger: CCCCGAGACCCTGAGTCCTCAGCCATGCTCGACTAT...AAGCAATGGATGAGTGCTGGACGAAGAATGGCCTGGGCAGAACAAATAGGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR TCA 90 bp GCAGCCAGAAGAGATGGTGGCAGTAGAAACAAGAGCAGCTCTCATCGCTGGGGGCCTGTCTCTCAGACATaGCGTACAGGTAGCGCTGAT +
Preference number: 4 (lower is better)
Translates to: AARRDGGSRNKSSSHRWGPVSQT*RTGSAD
Trigger: ATCAGCGCTACCTGTACGTCATGTCTGAGAGACAGG...CCCCCAGCGATGAGAGCTGCTCTTGTTTCTACTGCCACCATCTCTTCTGGCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR TCA 90 bp TTCTTCGTCCAGCACTCATCCATTGCTTCTGTTTCACGCTCAGCAGGGCCAGGGGGCTCACACACTGGCTaGTGCTGGCAGCAAATCGAT +
Preference number: 4 (lower is better)
Translates to: FFVQHSSIASVSRSAGPGGSHTG*CWQQID
Trigger: ATCGATTTGCTGCCAGCATCAGCCAGTGTGTGAGCC...CCCTGGCCCTGCTGAGCGTGAAACAGAAGCAATGGATGAGTGCTGGACGAAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR TCA 90 bp CCTCTGTCTTGCCAAGCACCCTTCTGGGGTCCTCTTCCTTTTCCAGAGCATTGTAGCGGAAGGCGCTGTTaGCACAGGACAGGCACAGTT +
Preference number: 4 (lower is better)
Translates to: PLSCQAPFWGPLPFPEHCSGRRC*HRTGTV
Trigger: AACTGTGCCTGTCCTGTGTCAACAGCGCCTTCCGCT...ACAATGCTCTGGAAAAGGAAGAGGACCCCAGAAGGGTGCTTGGCAAGACAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR TCA 90 bp TCCACGCTCTCCACAAACCTTCAAGGAAACGCCCCAGGGGCAGTGAATCGTCTCCCACGGCCAGATTGCTaGTGTCCATGCCATCATACT +
Preference number: 4 (lower is better)
Translates to: STLSTNLQGNAPGAVNRLPRPDC*CPCHHT
Trigger: AGTATGATGGCATGGACATCAGCAATCTGGCCGTGG...GAGACGATTCACTGCCCCTGGGGCGTTTCCTTGAAGGTTTGTGGAGAGCGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR TCA 90 bp GCAGCCAGAAGAGATGGTGGCAGTAGAAACAAGAGCAGCTCTCATCGCTGGGGGTCGGATTGGGTTGAGTaGCAGCACAGAAGGGTTCAC +
Preference number: 4 (lower is better)
Translates to: AARRDGGSRNKSSSHRWGSDWVE*QHRRVH
Trigger: GTGAACCCTTCTGTGCTGTCACTCAACCCAATCCGA...CCCCCAGCGATGAGAGCTGCTCTTGTTTCTACTGCCACCATCTCTTCTGGCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR TCA 90 bp TCCACGCTCTCCACAAACCTTCAAGGAAACGCCCCAGGGGCAGTGAATCGTCTCCGGATCCTTGGCTCCTaGATGACATCCAGGTTGAAG +
Preference number: 4 (lower is better)
Translates to: STLSTNLQGNAPGAVNRLRILGS*MTSRLK
Trigger: CTTCAACCTGGATGTCATTCAGGAGCCAAGGATCCG...GAGACGATTCACTGCCCCTGGGGCGTTTCCTTGAAGGTTTGTGGAGAGCGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR TCA 90 bp CCCACTGGCTTCTATGGGGCCTTTGGACCTGGGCATGGAGCTTTGGTCTCTTTGAATGCATCAGTGTGTTaGGCCGCTTCCAGTCACCCT +
Preference number: 4 (lower is better)
Translates to: PTGFYGAFGPGHGALVSLNASVC*AASSHP
Trigger: AGGGTGACTGGAAGCGGCTCAACACACTGATGCATT...CAAAGAGACCAAAGCTCCATGCCCAGGTCCAAAGGCCCCATAGAAGCCAGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR TCA 90 bp CCCACTGGCTTCTATGGGGCCTTTGGACCTGGGCATGGAGCTTTGGTCTCTTTGCCCGGTGCACAGTGCTaGACAAGGTCTCAAACAAGT +
Preference number: 4 (lower is better)
Translates to: PTGFYGAFGPGHGALVSLPGAQC*TRSQTS
Trigger: ACTTGTTTGAGACCTTGTTCAGCACTGTGCACCGGG...CAAAGAGACCAAAGCTCCATGCCCAGGTCCAAAGGCCCCATAGAAGCCAGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR TCA 90 bp AAGTTCCATACTCCTCTGGCTGCCGGGATAATTCCAGGTTTTACTGGCCTCTGTGGGCACTCAGCATGTTaGACTCCACGGCGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: KFHTPLAAGIIPGFTGLCGHSAC*TPRRAG
Trigger: GCCTGCACGCCGTGGAGTTCAACATGCTGAGTGCCC...ACAGAGGCCAGTAAAACCTGGAATTATCCCGGCAGCCAGAGGAGTATGGAACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR TCA 90 bp CCTCTGTCTTGCCAAGCACCCTTCTGGGGTCCTCTTCCTTTTCCAGAGCATTGTAGGAGCTTCCGTATATaGGCGAAGGGTGGTCTCCCC +
Preference number: 4 (lower is better)
Translates to: PLSCQAPFWGPLPFPEHCRSFRI*AKGGLP
Trigger: GGGGAGACCACCCTTCGCTCATATACGGAAGCTCCT...ACAATGCTCTGGAAAAGGAAGAGGACCCCAGAAGGGTGCTTGGCAAGACAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR TCA 90 bp GACAGCGATCCAAAGCTACACGCCAAGGATGGAAGCCAGACCTCTGCGCTCCCCTCTCTCATGGAATCCTaGGAAATGTGGCCAAACCAC +
Preference number: 4 (lower is better)
Translates to: DSDPKLHAKDGSQTSALPSLMES*EMWPNH
Trigger: GTGGTTTGGCCACATTTCTCAGGATTCCATGAGAGA...GGGGAGCGCAGAGGTCTGGCTTCCATCCTTGGCGTGTAGCTTTGGATCGCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR TCA 90 bp CCTCTGTCTTGCCAAGCACCCTTCTGGGGTCCTCTTCCTTTTCCAGAGCATTGTGGCGTCGGAAGGCCCTaGAGTTCATCTCCCAAGTTC +
Preference number: 4 (lower is better)
Translates to: PLSCQAPFWGPLPFPEHCGVGRP*SSSPKF
Trigger: GAACTTGGGAGATGAACTTCAGGGCCTTCCGACGCC...ACAATGCTCTGGAAAAGGAAGAGGACCCCAGAAGGGTGCTTGGCAAGACAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR TCA 90 bp GCAGCCAGAAGAGATGGTGGCAGTAGAAACAAGAGCAGCTCTCATCGCTGGGGGCAAGAGGAGTGGGTTTaGGCAGGAAAAGTTGTGGGG +
Preference number: 4 (lower is better)
Translates to: AARRDGGSRNKSSSHRWGQEEWV*AGKVVG
Trigger: CCCCACAACTTTTCCTGCTCAAACCCACTCCTCTTG...CCCCCAGCGATGAGAGCTGCTCTTGTTTCTACTGCCACCATCTCTTCTGGCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR GCA 90 bp TTCTTCGTCCAGCACTCATCCATTGCTTCTGTTTCACGCTCAGCAGGGCCAGGGAGAGGTTGCGGTACTTaGACCAATGGCAGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: FFVQHSSIASVSRSAGPGRGCGT*TNGSGR
Trigger: CCTTCCGCTGCCATTGGTGCAAGTACCGCAACCTCT...CCCTGGCCCTGCTGAGCGTGAAACAGAAGCAATGGATGAGTGCTGGACGAAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR GCA 90 bp AAGTTCCATACTCCTCTGGCTGCCGGGATAATTCCAGGTTTTACTGGCCTCTGTCGCGCATGGAGAAACTaGGCTGCAGCTCCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: KFHTPLAAGIIPGFTGLCRAWRN*AAAPGC
Trigger: GCACCCTGGAGCTGCAGCGCAGTTTCTCCATGCGCG...ACAGAGGCCAGTAAAACCTGGAATTATCCCGGCAGCCAGAGGAGTATGGAACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR GCA 90 bp GACACTCACAGAGCGCCTTTCCTCTCGATGACTCCCACTGGCTTCTATGGGGCCCCATACTCCTCTGGCTaGCGGGATAATTCCAGGTTT +
Preference number: 4 (lower is better)
Translates to: DTHRAPFLSMTPTGFYGAPYSSG*RDNSRF
Trigger: AAACCTGGAATTATCCCGGCAGCCAGAGGAGTATGG...GGCCCCATAGAAGCCAGTGGGAGTCATCGAGAGGAAAGGCGCTCTGTGAGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR GCA 90 bp CCCACTGGCTTCTATGGGGCCTTTGGACCTGGGCATGGAGCTTTGGTCTCTTTGGGGAGTGCTCTCCATTaGCCATTAGCATCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: PTGFYGAFGPGHGALVSLGSALH*PLASSV
Trigger: GACAGAGGATGCTAATGGGCAATGGAGAGCACTCCC...CAAAGAGACCAAAGCTCCATGCCCAGGTCCAAAGGCCCCATAGAAGCCAGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp GAGGCAGAACTGTCCCCAGCTCGTGCCTCTCGGCTTGAAGAACCACCTTCTCCCAAGAGTACATCGTCCTaGCTGGTGATATTGAAGGCC +
Preference number: 4 (lower is better)
Translates to: EAELSPARASRLEEPPSPKSTSS*LVILKA
Trigger: GGCCTTCAATATCACCAGCCAGGACGATGTACTCTT...GGGAGAAGGTGGTTCTTCAAGCCGAGAGGCACGAGCTGGGGACAGTTCTGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp GCAGCCAGAAGAGATGGTGGCAGTAGAAACAAGAGCAGCTCTCATCGCTGGGGGTCTGTGGGCACCAGCTaGGGACAGTCCTCTGAAATA +
Preference number: 4 (lower is better)
Translates to: AARRDGGSRNKSSSHRWGSVGTS*GQSSEI
Trigger: TATTTCAGAGGACTGTCCCCAGCTGGTGCCCACAGA...CCCCCAGCGATGAGAGCTGCTCTTGTTTCTACTGCCACCATCTCTTCTGGCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp GACAGCGATCCAAAGCTACACGCCAAGGATGGAAGCCAGACCTCTGCGCTCCCCAATGATGGGCGATCCTaGCTTTTGATCCAAGACTCC +
Preference number: 4 (lower is better)
Translates to: DSDPKLHAKDGSQTSALPNDGRS*LLIQDS
Trigger: GGAGTCTTGGATCAAAAGCCAGGATCGCCCATCATT...GGGGAGCGCAGAGGTCTGGCTTCCATCCTTGGCGTGTAGCTTTGGATCGCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp CCTCTGTCTTGCCAAGCACCCTTCTGGGGTCCTCTTCCTTTTCCAGAGCATTGTTCAAATGGAACCTCGTaGAGGCCTGGCCCACACACC +
Preference number: 4 (lower is better)
Translates to: PLSCQAPFWGPLPFPEHCSNGTS*RPGPHT
Trigger: GGTGTGTGGGCCAGGCCTCCACGAGGTTCCATTTGA...ACAATGCTCTGGAAAAGGAAGAGGACCCCAGAAGGGTGCTTGGCAAGACAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp GACACTCACAGAGCGCCTTTCCTCTCGATGACTCCCACTGGCTTCTATGGGGCCTGCTGTAGGCCCAGATaGTCAGGAGCTTCCGTATAT +
Preference number: 4 (lower is better)
Translates to: DTHRAPFLSMTPTGFYGACCRPR*SGASVY
Trigger: ATATACGGAAGCTCCTGACCATCTGGGCCTACAGCA...GGCCCCATAGAAGCCAGTGGGAGTCATCGAGAGGAAAGGCGCTCTGTGAGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp TCCACGCTCTCCACAAACCTTCAAGGAAACGCCCCAGGGGCAGTGAATCGTCTCCAGAACAGTTGGAGCTaGCTGCTCGGATCCAAGGTA +
Preference number: 4 (lower is better)
Translates to: STLSTNLQGNAPGAVNRLQNSWS*LLGSKV
Trigger: TACCTTGGATCCGAGCAGCCAGCTCCAACTGTTCTG...GAGACGATTCACTGCCCCTGGGGCGTTTCCTTGAAGGTTTGTGGAGAGCGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp GACACTCACAGAGCGCCTTTCCTCTCGATGACTCCCACTGGCTTCTATGGGGCCGAAGAGCAAACACTTTaGCTTAGTGCGGAAGGCCAG +
Preference number: 4 (lower is better)
Translates to: DTHRAPFLSMTPTGFYGAEEQTL*LSAEGQ
Trigger: CTGGCCTTCCGCACTAAGCCAAAGTGTTTGCTCTTC...GGCCCCATAGAAGCCAGTGGGAGTCATCGAGAGGAAAGGCGCTCTGTGAGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp GAGGCAGAACTGTCCCCAGCTCGTGCCTCTCGGCTTGAAGAACCACCTTCTCCCTTCATTGGTTCTTGGTaGCCCAAAGCGAAGAGGTGT +
Preference number: 4 (lower is better)
Translates to: EAELSPARASRLEEPPSPFIGSW*PKAKRC
Trigger: ACACCTCTTCGCTTTGGGCCACCAAGAACCAATGAA...GGGAGAAGGTGGTTCTTCAAGCCGAGAGGCACGAGCTGGGGACAGTTCTGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp GCAGCCAGAAGAGATGGTGGCAGTAGAAACAAGAGCAGCTCTCATCGCTGGGGGGGGTGTGGACTTCATTaGTTCTTGGTGGCCCAAAGC +
Preference number: 4 (lower is better)
Translates to: AARRDGGSRNKSSSHRWGGCGLH*FLVAQS
Trigger: GCTTTGGGCCACCAAGAACCAATGAAGTCCACACCC...CCCCCAGCGATGAGAGCTGCTCTTGTTTCTACTGCCACCATCTCTTCTGGCTGC
56% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR CAA 72 bp GGGAGTGCTCTCCATTGCCCATTAGCATCCTCTGTCTaGCCAAGCACCCTTCTGGGGTCCTCTTCCTTTTCC +
Preference number: 4 (lower is better)
Translates to: GSALHCPLASSV*PSTLLGSSSFS
Trigger: GGAAAAGGAAGAGGACCCCAGAAGGGTGCTTGGCAAGACAGAGGATGCTAATGGGCAATGGAGAGCACTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR CAA 72 bp AAACTGGTACCCTGTGCCACTAGGGGAGGAGAACTGTaGCCTGCTAAGTTGGTGGCAGGAACCAGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: KLVPCATRGGEL*PAKLVAGTSFL
Trigger: CAGGAAGCTGGTTCCTGCCACCAACTTAGCAGGCAACAGTTCTCCTCCCCTAGTGGCACAGGGTACCAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR TCA 90 bp GGCCTTTGGACCTGGGCATGGAGCTTTGGTCTCTTTGTTTGGAATCTACACTCACAGAGTGGAAGGTGCTaGACTGAGGCATGCCGGCTG +
Preference number: 4 (lower is better)
Translates to: GLWTWAWSFGLFVWNLHSQSGRC*TEACRL
Trigger: CAGCCGGCATGCCTCAGTTCAGCACCTTCCACTCTG...TGAGTGTAGATTCCAAACAAAGAGACCAAAGCTCCATGCCCAGGTCCAAAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR TCA 90 bp CAAGCACCCTTCTGGGGTCCTCTTCCTTTTCCAGAGCATTGTCTCTTGTGCAGAGCTTATAGACCCGGTTaGTGGCCCCCACATAGACGG +
Preference number: 4 (lower is better)
Translates to: QAPFWGPLPFPEHCLLCRAYRPG*WPPHRR
Trigger: CCGTCTATGTGGGGGCCATCAACCGGGTCTATAAGC...TCTGCACAAGAGACAATGCTCTGGAAAAGGAAGAGGACCCCAGAAGGGTGCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR TCA 90 bp CAAGCACCCTTCTGGGGTCCTCTTCCTTTTCCAGAGCATTGTCTCTTGTGCAGAATGGCTCCACCAGGATaGAGAGGTCATCCAGCCGCA +
Preference number: 4 (lower is better)
Translates to: QAPFWGPLPFPEHCLLCRMAPPG*RGHPAA
Trigger: TGCGGCTGGATGACCTCTTCATCCTGGTGGAGCCAT...TCTGCACAAGAGACAATGCTCTGGAAAAGGAAGAGGACCCCAGAAGGGTGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR TCA 90 bp GAGAAGTCATCCACTTGTCCTTCACACTCACAAGTCCGTGAGAGGCAGAAAGAGGAGCCGCACGATGCGTaGGGTGTAGAAGAGGTCTCC +
Preference number: 4 (lower is better)
Translates to: EKSSTCPSHSQVRERQKEEPHDA*GVEEVS
Trigger: GGAGACCTCTTCTACACCTCACGCATCGTGCGGCTC...CTCTTTCTGCCTCTCACGGACTTGTGAGTGTGAAGGACAAGTGGATGACTTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR TCA 90 bp GTCTTGCCAAGCACCCTTCTGGGGTCCTCTTCCTTTTCCAGAGCATTGTCTCTTGGGCAGGGACACGTATaGGTGGAACTTGGGGTCATC +
Preference number: 4 (lower is better)
Translates to: VLPSTLLGSSSFSRALSLGQGHV*VELGVI
Trigger: GATGACCCCAAGTTCCACTCATACGTGTCCCTGCCC...AAGAGACAATGCTCTGGAAAAGGAAGAGGACCCCAGAAGGGTGCTTGGCAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR TCA 90 bp GGCCTTTGGACCTGGGCATGGAGCTTTGGTCTCTTTGTTTGGAATCTACACTCACTTGATCCAGCGGGATaGCAGGGACATCCTTGGGCC +
Preference number: 4 (lower is better)
Translates to: GLWTWAWSFGLFVWNLHSLDPAG*QGHPWA
Trigger: GGCCCAAGGATGTCCCTGTCATCCCGCTGGATCAAG...TGAGTGTAGATTCCAAACAAAGAGACCAAAGCTCCATGCCCAGGTCCAAAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR TCA 90 bp CCTCTGTCTTGCCAAGCACCCTTCTGGGGTCCTCTTCCTTTTCCAGAGCATTGTGACCTCGGATTGGGTTaGGTGACAGCACAGAAGGGT +
Preference number: 4 (lower is better)
Translates to: PLSCQAPFWGPLPFPEHCDLGLG*VTAQKG
Trigger: ACCCTTCTGTGCTGTCACTCAACCCAATCCGAGGTC...ACAATGCTCTGGAAAAGGAAGAGGACCCCAGAAGGGTGCTTGGCAAGACAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR TCA 90 bp GGCCTTTGGACCTGGGCATGGAGCTTTGGTCTCTTTGTTTGGAATCTACACTCAGCAAGCTGTCTGAGATaGCACTCACCGAGCCAGGCG +
Preference number: 4 (lower is better)
Translates to: GLWTWAWSFGLFVWNLHSASCLR*HSPSQA
Trigger: CGCCTGGCTCGGTGAGTGTCATCTCAGACAGCTTGC...TGAGTGTAGATTCCAAACAAAGAGACCAAAGCTCCATGCCCAGGTCCAAAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR GCA 90 bp AAGTTCCATACTCCTCTGGCTGCCGGGATAATTCCAGGTTTTACTGGCCTCTGTAGGCCACAGAGGTCATaGGGTCCCTGCTGGTGGTGT +
Preference number: 4 (lower is better)
Translates to: KFHTPLAAGIIPGFTGLCRPQRS*GPCWWC
Trigger: ACACCACCAGCAGGGACCGCATGACCTCTGTGGCCT...ACAGAGGCCAGTAAAACCTGGAATTATCCCGGCAGCCAGAGGAGTATGGAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR GCA 90 bp CAAGCACCCTTCTGGGGTCCTCTTCCTTTTCCAGAGCATTGTCTCTTGTGCAGAGCTCTCCCGCTGGGCTaGACACTTGTAGAGATGGAC +
Preference number: 4 (lower is better)
Translates to: QAPFWGPLPFPEHCLLCRALPLG*TLVEMD
Trigger: GTCCATCTCTACAAGTGTGCAGCCCAGCGGGAGAGC...TCTGCACAAGAGACAATGCTCTGGAAAAGGAAGAGGACCCCAGAAGGGTGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR GCA 90 bp AAGTTCCATACTCCTCTGGCTGCCGGGATAATTCCAGGTTTTACTGGCCTCTGTGAAGGGCTGGTACAGTaGTGGTGGAGGGTGCACCTG +
Preference number: 4 (lower is better)
Translates to: KFHTPLAAGIIPGFTGLCEGLVQ*WWRVHL
Trigger: CAGGTGCACCCTCCACCAGCACTGTACCAGCCCTTC...ACAGAGGCCAGTAAAACCTGGAATTATCCCGGCAGCCAGAGGAGTATGGAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR GCA 90 bp CAAGCACCCTTCTGGGGTCCTCTTCCTTTTCCAGAGCATTGTCTCTTGTGCAGAAGGGCCTTCTCCACGTaGTGCTGCCCGTTTCCTTGT +
Preference number: 4 (lower is better)
Translates to: QAPFWGPLPFPEHCLLCRRAFST*CCPFPC
Trigger: ACAAGGAAACGGGCAGCAGCACGTGGAGAAGGCCCT...TCTGCACAAGAGACAATGCTCTGGAAAAGGAAGAGGACCCCAGAAGGGTGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR GCA 90 bp GTCTTGCCAAGCACCCTTCTGGGGTCCTCTTCCTTTTCCAGAGCATTGTCTCTTATGGAGAAACTGCGCTaGAGCTCCAGGGTGCGGATG +
Preference number: 4 (lower is better)
Translates to: VLPSTLLGSSSFSRALSLMEKLR*SSRVRM
Trigger: CATCCGCACCCTGGAGCTGCAGCGCAGTTTCTCCAT...AAGAGACAATGCTCTGGAAAAGGAAGAGGACCCCAGAAGGGTGCTTGGCAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR GCA 90 bp GAGGCAGAACTGTCCCCAGCTCGTGCCTCTCGGCTTGAAGAACCACCTTCTCCCTCTGTGAAGCCACTTTaGATTTTCTCACCCACTGAG +
Preference number: 4 (lower is better)
Translates to: EAELSPARASRLEEPPSPSVKPL*IFSPTE
Trigger: CTCAGTGGGTGAGAAAATGCAAAGTGGCTTCACAGA...GGGAGAAGGTGGTTCTTCAAGCCGAGAGGCACGAGCTGGGGACAGTTCTGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR GCA 90 bp GCTCCCTATTTGTTCTGCCCAGGCCATTCTTCGTCCAGCACTCATCCATTGCTTGGTGGAGGCCCTGTATaGCAAGCAGTGGCTGTGATC +
Preference number: 4 (lower is better)
Translates to: APYLFCPGHSSSSTHPLLGGGPV*QAVAVI
Trigger: GATCACAGCCACTGCTTGGCATACAGGGCCTCCACC...AAGCAATGGATGAGTGCTGGACGAAGAATGGCCTGGGCAGAACAAATAGGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp GTTGGTCTGCTTTCTTCCTTTGCTGGACCACTTTTCCTACAAAACTGGTACCCTGGCGCCTTGGTGCACTaGACGTCCTTCCCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: VGLLSSFAGPLFLQNWYPGALVH*TSFPSS
Trigger: GCTGCTGGGGAAGGACGTCCAGTGCACCAAGGCGCC...AGGGTACCAGTTTTGTAGGAAAAGTGGTCCAGCAAAGGAAGAAAGCAGACCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp GGCCTTTGGACCTGGGCATGGAGCTTTGGTCTCTTTGTTTGGAATCTACACTCATCATGCGGTCCCTGCTaGTGGTGTACAGGGTCAGGC +
Preference number: 4 (lower is better)
Translates to: GLWTWAWSFGLFVWNLHSSCGPC*WCTGSG
Trigger: GCCTGACCCTGTACACCACCAGCAGGGACCGCATGA...TGAGTGTAGATTCCAAACAAAGAGACCAAAGCTCCATGCCCAGGTCCAAAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp TCTGCTTTCTTCCTTTGCTGGACCACTTTTCCTACAAAACTGGTACCCTGTGCCTGGCCGGACTGCGGCTaGGGCAGATTTCGCGCCTTA +
Preference number: 4 (lower is better)
Translates to: SAFFLCWTTFPTKLVPCAWPDCG*GRFRAL
Trigger: TAAGGCGCGAAATCTGCCCCAGCCGCAGTCCGGCCA...GGCACAGGGTACCAGTTTTGTAGGAAAAGTGGTCCAGCAAAGGAAGAAAGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp GGCCTTTGGACCTGGGCATGGAGCTTTGGTCTCTTTGTTTGGAATCTACACTCACCAGCCACCTGCACATaGTGGGCGATCTCGGAGAAG +
Preference number: 4 (lower is better)
Translates to: GLWTWAWSFGLFVWNLHSPATCT*WAISEK
Trigger: CTTCTCCGAGATCGCCCACCATGTGCAGGTGGCTGG...TGAGTGTAGATTCCAAACAAAGAGACCAAAGCTCCATGCCCAGGTCCAAAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp GACAGCGATCCAAAGCTACACGCCAAGGATGGAAGCCAGACCTCTGCGCTCCCCCTTCGTCATGAACTCTaGCTTACACTCGCCAATACA +
Preference number: 4 (lower is better)
Translates to: DSDPKLHAKDGSQTSALPLRHEL*LTLANT
Trigger: TGTATTGGCGAGTGTAAGCCAGAGTTCATGACGAAG...GGGGAGCGCAGAGGTCTGGCTTCCATCCTTGGCGTGTAGCTTTGGATCGCTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp GACAGCGATCCAAAGCTACACGCCAAGGATGGAAGCCAGACCTCTGCGCTCCCCTCATTGATATCCGTCTaGAGCTCAGCAAAAGCTTCC +
Preference number: 4 (lower is better)
Translates to: DSDPKLHAKDGSQTSALPSLISV*SSAKAS
Trigger: GGAAGCTTTTGCTGAGCTCCAGACGGATATCAATGA...GGGGAGCGCAGAGGTCTGGCTTCCATCCTTGGCGTGTAGCTTTGGATCGCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp GACAGCGATCCAAAGCTACACGCCAAGGATGGAAGCCAGACCTCTGCGCTCCCCAAATCAACTTTCAAATaGAACCTCGTGGAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: DSDPKLHAKDGSQTSALPKSTFK*NLVEAW
Trigger: CCAGGCCTCCACGAGGTTCCATTTGAAAGTTGATTT...GGGGAGCGCAGAGGTCTGGCTTCCATCCTTGGCGTGTAGCTTTGGATCGCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp TTCTTCGTCCAGCACTCATCCATTGCTTCTGTTTCACGCTCAGCAGGGCCAGGGCTCTCTTGGAGGAGCTaGTCTAGCTTCCCAGCATCA +
Preference number: 4 (lower is better)
Translates to: FFVQHSSIASVSRSAGPGLSWRS*SSFPAS
Trigger: TGATGCTGGGAAGCTAGACCAGCTCCTCCAAGAGAG...CCCTGGCCCTGCTGAGCGTGAAACAGAAGCAATGGATGAGTGCTGGACGAAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR TCA 90 bp GAGAAGTCATCCACTTGTCCTTCACACTCACAAGTCCGTGAGAGGCAGAAAGAGTCATCGGGCGGGTGGTaGTACTGCTTCTGCCCTTTG +
Preference number: 4 (lower is better)
Translates to: EKSSTCPSHSQVRERQKESSGGW*YCFCPL
Trigger: CAAAGGGCAGAAGCAGTATCACCACCCGCCCGATGA...CTCTTTCTGCCTCTCACGGACTTGTGAGTGTGAAGGACAAGTGGATGACTTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR TCA 90 bp GAGAAGTCATCCACTTGTCCTTCACACTCACAAGTCCGTGAGAGGCAGAAAGAGGGCTGCCCGTATACCTaGAGGAGGAGTCGTATCTGC +
Preference number: 4 (lower is better)
Translates to: EKSSTCPSHSQVRERQKEGCPYT*RRSRIC
Trigger: GCAGATACGACTCCTCCTTCAGGTATACGGGCAGCC...CTCTTTCTGCCTCTCACGGACTTGTGAGTGTGAAGGACAAGTGGATGACTTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR TCA 90 bp GGCCTTTGGACCTGGGCATGGAGCTTTGGTCTCTTTGTTTGGAATCTACACTCACCAGATGCCACACCTTaGCCCCACTTTCCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: GLWTWAWSFGLFVWNLHSPDATP*PHFPGL
Trigger: CAGACCTGGAAAGTGGGGTCAAGGTGTGGCATCTGG...TGAGTGTAGATTCCAAACAAAGAGACCAAAGCTCCATGCCCAGGTCCAAAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR TCA 90 bp GAGGCAGAACTGTCCCCAGCTCGTGCCTCTCGGCTTGAAGAACCACCTTCTCCCTCTCCTCTCAAAAGATaGGAATATACAGGTGTGTGG +
Preference number: 4 (lower is better)
Translates to: EAELSPARASRLEEPPSPSPLKR*EYTGVW
Trigger: CCACACACCTGTATATTCTCATCTTTTGAGAGGAGA...GGGAGAAGGTGGTTCTTCAAGCCGAGAGGCACGAGCTGGGGACAGTTCTGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR TCA 90 bp GGCCTTTGGACCTGGGCATGGAGCTTTGGTCTCTTTGTTTGGAATCTACACTCATGGCCACCAAGGTCCTaGCACTCACAGAGCGCCTTT +
Preference number: 4 (lower is better)
Translates to: GLWTWAWSFGLFVWNLHSWPPRS*HSQSAF
Trigger: AAAGGCGCTCTGTGAGTGTCAGGACCTTGGTGGCCA...TGAGTGTAGATTCCAAACAAAGAGACCAAAGCTCCATGCCCAGGTCCAAAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR TCA 90 bp GTCTTGCCAAGCACCCTTCTGGGGTCCTCTTCCTTTTCCAGAGCATTGTCTCTTCTCAAAGCATGTTCCTaGGACAAGGCGTCGGAAGGC +
Preference number: 4 (lower is better)
Translates to: VLPSTLLGSSSFSRALSLLKACS*DKASEG
Trigger: GCCTTCCGACGCCTTGTCTCAGGAACATGCTTTGAG...AAGAGACAATGCTCTGGAAAAGGAAGAGGACCCCAGAAGGGTGCTTGGCAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR GCA 90 bp AAGTTCCATACTCCTCTGGCTGCCGGGATAATTCCAGGTTTTACTGGCCTCTGTGACGGCTCCTGTGTGTaGTCATCTGCTCCACCTTCC +
Preference number: 4 (lower is better)
Translates to: KFHTPLAAGIIPGFTGLCDGSCV*SSAPPS
Trigger: GGAAGGTGGAGCAGATGAGCACACACAGGAGCCGTC...ACAGAGGCCAGTAAAACCTGGAATTATCCCGGCAGCCAGAGGAGTATGGAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR GCA 90 bp CAACCGGGATGCACCTGGAGATTTATCAGCCAGAAGCTTTCAAATGCTCCCTATAGAGCGCTGCCCCGGTaGACAGTGCTGAACAAGGTC +
Preference number: 4 (lower is better)
Translates to: QPGCTWRFISQKLSNAPYRALPR*TVLNKV
Trigger: GACCTTGTTCAGCACTGTGCACCGGGGCAGCGCTCT...ATAGGGAGCATTTGAAAGCTTCTGGCTGATAAATCTCCAGGTGCATCCCGGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR GCA 90 bp CCTCTGTCTTGCCAAGCACCCTTCTGGGGTCCTCTTCCTTTTCCAGAGCATTGTGAGCTTGGCGATGTCTaGGTAGTATCTCTCCACCCA +
Preference number: 4 (lower is better)
Translates to: PLSCQAPFWGPLPFPEHCELGDV*VVSLHP
Trigger: TGGGTGGAGAGATACTACGCAGACATCGCCAAGCTC...ACAATGCTCTGGAAAAGGAAGAGGACCCCAGAAGGGTGCTTGGCAAGACAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR GCA 90 bp TCCACGCTCTCCACAAACCTTCAAGGAAACGCCCCAGGGGCAGTGAATCGTCTCGTCTCCAAAAGTAACTaGTGGGAGATGCCAGGTAGA +
Preference number: 4 (lower is better)
Translates to: STLSTNLQGNAPGAVNRLVSKSN*WEMPGR
Trigger: TCTACCTGGCATCTCCCAGCAGTTACTTTTGGAGAC...GAGACGATTCACTGCCCCTGGGGCGTTTCCTTGAAGGTTTGTGGAGAGCGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR GCA 90 bp TTCTTCGTCCAGCACTCATCCATTGCTTCTGTTTCACGCTCAGCAGGGCCAGGGGAGGAATCTCCAGTTTaGTTATTGGGTGGAGGCCCT +
Preference number: 4 (lower is better)
Translates to: FFVQHSSIASVSRSAGPGEESPV*LLGGGP
Trigger: AGGGCCTCCACCCAATAAGCAAACTGGAGATTCCTC...CCCTGGCCCTGCTGAGCGTGAAACAGAAGCAATGGATGAGTGCTGGACGAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp GAGAAGTCATCCACTTGTCCTTCACACTCACAAGTCCGTGAGAGGCAGAAAGAGTCCACCTTCCCCGGTTaGCCCTCACATGATTCCAGC +
Preference number: 4 (lower is better)
Translates to: EKSSTCPSHSQVRERQKESTFPG*PSHDSS
Trigger: GCTGGAATCATGTGAGGGCCAACCGGGGAAGGTGGA...CTCTTTCTGCCTCTCACGGACTTGTGAGTGTGAAGGACAAGTGGATGACTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp CCTCTGTCTTGCCAAGCACCCTTCTGGGGTCCTCTTCCTTTTCCAGAGCATTGTTATGAGCCACCTGGATaGTCAGGTTGCCTGTCAGCT +
Preference number: 4 (lower is better)
Translates to: PLSCQAPFWGPLPFPEHCYEPPG*SGCLSA
Trigger: AGCTGACAGGCAACCTGACCATCCAGGTGGCTCATA...ACAATGCTCTGGAAAAGGAAGAGGACCCCAGAAGGGTGCTTGGCAAGACAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp CAACCGGGATGCACCTGGAGATTTATCAGCCAGAAGCTTTCAAATGCTCCCTATGCCACCTGCACATGGTaGGCGATCTCGGAGAAGTCC +
Preference number: 4 (lower is better)
Translates to: QPGCTWRFISQKLSNAPYATCTW*AISEKS
Trigger: GGACTTCTCCGAGATCGCCCACCATGTGCAGGTGGC...ATAGGGAGCATTTGAAAGCTTCTGGCTGATAAATCTCCAGGTGCATCCCGGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp GGCCTTTGGACCTGGGCATGGAGCTTTGGTCTCTTTGTTTGGAATCTACACTCATCTGGCTCGATGCGCTaGACCCGAGGGTCATCTATG +
Preference number: 4 (lower is better)
Translates to: GLWTWAWSFGLFVWNLHSSGSMR*TRGSSM
Trigger: CATAGATGACCCTCGGGTCCAGCGCATCGAGCCAGA...TGAGTGTAGATTCCAAACAAAGAGACCAAAGCTCCATGCCCAGGTCCAAAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp GTTGGTCTGCTTTCTTCCTTTGCTGGACCACTTTTCCTACAAAACTGGTACCCTGGCAATGCTCCACTCTaGCTCGATGCGCTGGACCCG +
Preference number: 4 (lower is better)
Translates to: VGLLSSFAGPLFLQNWYPGNAPL*LDALDP
Trigger: CGGGTCCAGCGCATCGAGCCAGAGTGGAGCATTGCC...AGGGTACCAGTTTTGTAGGAAAAGTGGTCCAGCAAAGGAAGAAAGCAGACCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp AAGTTCCATACTCCTCTGGCTGCCGGGATAATTCCAGGTTTTACTGGCCTCTGTATGGTCAGGGGTGTGTaGCCACTGGCAATGCTCCAC +
Preference number: 4 (lower is better)
Translates to: KFHTPLAAGIIPGFTGLCMVRGV*PLAMLH
Trigger: GTGGAGCATTGCCAGTGGCCACACACCCCTGACCAT...ACAGAGGCCAGTAAAACCTGGAATTATCCCGGCAGCCAGAGGAGTATGGAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp GCAGCCAGAAGAGATGGTGGCAGTAGAAACAAGAGCAGCTCTCATCGCTGGGGGTTTGACTCGGATCCTTaGCTCCTGAATGACATCCAG +
Preference number: 4 (lower is better)
Translates to: AARRDGGSRNKSSSHRWGFDSDP*LLNDIQ
Trigger: CTGGATGTCATTCAGGAGCCAAGGATCCGAGTCAAA...CCCCCAGCGATGAGAGCTGCTCTTGTTTCTACTGCCACCATCTCTTCTGGCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp GACACTCACAGAGCGCCTTTCCTCTCGATGACTCCCACTGGCTTCTATGGGGCCCTGGGCATGGAGCTTTaGTCTCTTTGTTTGGAATCT +
Preference number: 4 (lower is better)
Translates to: DTHRAPFLSMTPTGFYGALGMEL*SLCLES
Trigger: AGATTCCAAACAAAGAGACCAAAGCTCCATGCCCAG...GGCCCCATAGAAGCCAGTGGGAGTCATCGAGAGGAAAGGCGCTCTGTGAGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp AAGTTCCATACTCCTCTGGCTGCCGGGATAATTCCAGGTTTTACTGGCCTCTGTTGGGGCCTTTGGACCTaGGCATGGAGCTTTGGTCTC +
Preference number: 4 (lower is better)
Translates to: KFHTPLAAGIIPGFTGLCWGLWT*AWSFGL
Trigger: GAGACCAAAGCTCCATGCCCAGGTCCAAAGGCCCCA...ACAGAGGCCAGTAAAACCTGGAATTATCCCGGCAGCCAGAGGAGTATGGAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp TTCTTCGTCCAGCACTCATCCATTGCTTCTGTTTCACGCTCAGCAGGGCCAGGGTGGTCTAGTCTCTCTTaGAGGAGCTGGTCTAGCTTC +
Preference number: 4 (lower is better)
Translates to: FFVQHSSIASVSRSAGPGWSSLS*RSWSSF
Trigger: GAAGCTAGACCAGCTCCTCCAAGAGAGACTAGACCA...CCCTGGCCCTGCTGAGCGTGAAACAGAAGCAATGGATGAGTGCTGGACGAAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp AAGTTCCATACTCCTCTGGCTGCCGGGATAATTCCAGGTTTTACTGGCCTCTGTGCTACACGCCAAGGATaGAAGCCAGACCTCTGCGCT +
Preference number: 4 (lower is better)
Translates to: KFHTPLAAGIIPGFTGLCATRQG*KPDLCA
Trigger: AGCGCAGAGGTCTGGCTTCCATCCTTGGCGTGTAGC...ACAGAGGCCAGTAAAACCTGGAATTATCCCGGCAGCCAGAGGAGTATGGAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp CCCACTGGCTTCTATGGGGCCTTTGGACCTGGGCATGGAGCTTTGGTCTCTTTGTCCAAAAGTAACTGCTaGGAGATGCCAGGTAGATGC +
Preference number: 4 (lower is better)
Translates to: PTGFYGAFGPGHGALVSLSKSNC*EMPGRC
Trigger: GCATCTACCTGGCATCTCCCAGCAGTTACTTTTGGA...CAAAGAGACCAAAGCTCCATGCCCAGGTCCAAAGGCCCCATAGAAGCCAGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp CCTCTGTCTTGCCAAGCACCCTTCTGGGGTCCTCTTCCTTTTCCAGAGCATTGTCTCCCCCAAGATGAATaGCTTCTTGTGGAGAGGAGC +
Preference number: 4 (lower is better)
Translates to: PLSCQAPFWGPLPFPEHCLPQDE*LLVERS
Trigger: GCTCCTCTCCACAAGAAGCCATTCATCTTGGGGGAG...ACAATGCTCTGGAAAAGGAAGAGGACCCCAGAAGGGTGCTTGGCAAGACAGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp TTCTTCGTCCAGCACTCATCCATTGCTTCTGTTTCACGCTCAGCAGGGCCAGGGTCCTGGAGCAGCTGCTaGATCAGTATTTACCAGGAG +
Preference number: 4 (lower is better)
Translates to: FFVQHSSIASVSRSAGPGSWSSC*ISIYQE
Trigger: CTCCTGGTAAATACTGATCCAGCAGCTGCTCCAGGA...CCCTGGCCCTGCTGAGCGTGAAACAGAAGCAATGGATGAGTGCTGGACGAAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp TTCTTCGTCCAGCACTCATCCATTGCTTCTGTTTCACGCTCAGCAGGGCCAGGGAGTTTGCTTATTGGGTaGAGGCCCTGTATGCCAAGC +
Preference number: 4 (lower is better)
Translates to: FFVQHSSIASVSRSAGPGSLLIG*RPCMPS
Trigger: GCTTGGCATACAGGGCCTCCACCCAATAAGCAAACT...CCCTGGCCCTGCTGAGCGTGAAACAGAAGCAATGGATGAGTGCTGGACGAAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp CAAGCACCCTTCTGGGGTCCTCTTCCTTTTCCAGAGCATTGTCTCTTGTGCAGAGAGCAGGAAAAGTTGTaGGGAAAGGCAGGTGGGCTC +
Preference number: 4 (lower is better)
Translates to: QAPFWGPLPFPEHCLLCREQEKL*GKAGGL
Trigger: GAGCCCACCTGCCTTTCCCCACAACTTTTCCTGCTC...TCTGCACAAGAGACAATGCTCTGGAAAAGGAAGAGGACCCCAGAAGGGTGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR CAA 72 bp CTGGGAATCACATGTGGTCAGCAGGGCCTTTGGAAATaGGAACCACTTGGAGGTAAAGCAGGGCACGGAGAA +
Preference number: 4 (lower is better)
Translates to: LGITCGQQGLWK*EPLGGKAGHGE
Trigger: TTCTCCGTGCCCTGCTTTACCTCCAAGTGGTTCCAATTTCCAAAGGCCCTGCTGACCACATGTGATTCCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR CAA 72 bp GAGATGCTACTGAGATGTCCGACTGCCTTTAACTTCTaGGTGGAGCAAAGCCTGGATGCCAGTCTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: EMLLRCPTAFNF*VEQSLDASLSS
Trigger: GCTGCTCAGACTGGCATCCAGGCTTTGCTCCACCAAGAAGTTAAAGGCAGTCGGACATCTCAGTAGCATCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR CAA 72 bp GGGCCAGGGGTCTTGACTGCTATTTCCTGTCCTCATTaGGTGGAACTGAAGGAAGGTCAGAAGCTCAAGCAG +
Preference number: 4 (lower is better)
Translates to: GPGVLTAISCPH*VELKEGQKLKQ
Trigger: CTGCTTGAGCTTCTGACCTTCCTTCAGTTCCACCAAATGAGGACAGGAAATAGCAGTCAAGACCCCTGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR TCA 90 bp CCTCTGTCTTGCCAAGCACCCTTCTGGGGTCCTCTTCCTTTTCCAGAGCATTGTACTTATCTGTATTCCTaGAGTCGCTCCTCGGTCTCC +
Preference number: 4 (lower is better)
Translates to: PLSCQAPFWGPLPFPEHCTYLYS*SRSSVS
Trigger: GGAGACCGAGGAGCGACTTCAGGAATACAGATAAGT...ACAATGCTCTGGAAAAGGAAGAGGACCCCAGAAGGGTGCTTGGCAAGACAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR TCA 90 bp CAACCGGGATGCACCTGGAGATTTATCAGCCAGAAGCTTTCAAATGCTCCCTATTCTGGCCCTGTCTTATaGGCCACCTGGATGGTCAGG +
Preference number: 4 (lower is better)
Translates to: QPGCTWRFISQKLSNAPYSGPVL*ATWMVR
Trigger: CCTGACCATCCAGGTGGCTCATAAGACAGGGCCAGA...ATAGGGAGCATTTGAAAGCTTCTGGCTGATAAATCTCCAGGTGCATCCCGGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR TCA 90 bp GAGAAGTCATCCACTTGTCCTTCACACTCACAAGTCCGTGAGAGGCAGAAAGAGCTGGGGACAGTCCTCTaGAATATTGATCCGGCCCTC +
Preference number: 4 (lower is better)
Translates to: EKSSTCPSHSQVRERQKELGTVL*NIDPAL
Trigger: GAGGGCCGGATCAATATTTCAGAGGACTGTCCCCAG...CTCTTTCTGCCTCTCACGGACTTGTGAGTGTGAAGGACAAGTGGATGACTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR TCA 90 bp CCTCTGTCTTGCCAAGCACCCTTCTGGGGTCCTCTTCCTTTTCCAGAGCATTGTCCGTCAAAATCTCGGTaGTTTGAGGGTTGGAGCACT +
Preference number: 4 (lower is better)
Translates to: PLSCQAPFWGPLPFPEHCPSKSR*FEGWST
Trigger: AGTGCTCCAACCCTCAAATCACCGAGATTTTGACGG...ACAATGCTCTGGAAAAGGAAGAGGACCCCAGAAGGGTGCTTGGCAAGACAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR TCA 90 bp CAACCGGGATGCACCTGGAGATTTATCAGCCAGAAGCTTTCAAATGCTCCCTATGGGTCTCAGATACGGTaGCAGCACAAGGGGTCTCTC +
Preference number: 4 (lower is better)
Translates to: QPGCTWRFISQKLSNAPYGSQIR*QHKGSL
Trigger: GAGAGACCCCTTGTGCTGTCACCGTATCTGAGACCC...ATAGGGAGCATTTGAAAGCTTCTGGCTGATAAATCTCCAGGTGCATCCCGGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR TCA 90 bp GCTCCCTATTTGTTCTGCCCAGGCCATTCTTCGTCCAGCACTCATCCATTGCTTCCAGGTTCTTATCGATaGGGTCAGAGAGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: APYLFCPGHSSSSTHPLLPGSYR*GQRAAA
Trigger: AGCAGCTGCTCTCTGACCTCATCGATAAGAACCTGG...AAGCAATGGATGAGTGCTGGACGAAGAATGGCCTGGGCAGAACAAATAGGGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR TCA 90 bp CAAGCACCCTTCTGGGGTCCTCTTCCTTTTCCAGAGCATTGTCTCTTGTGCAGACACCACCGACCTGTCTaGCACCTGATAATGCATCAG +
Preference number: 4 (lower is better)
Translates to: QAPFWGPLPFPEHCLLCRHHRPV*HLIMHQ
Trigger: CTGATGCATTATCAGGTGTCAGACAGGTCGGTGGTG...TCTGCACAAGAGACAATGCTCTGGAAAAGGAAGAGGACCCCAGAAGGGTGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR TCA 90 bp TTCTTCGTCCAGCACTCATCCATTGCTTCTGTTTCACGCTCAGCAGGGCCAGGGAGAAGGAAAGTCCAGTaGGAAGTCATCCACTTGTCC +
Preference number: 4 (lower is better)
Translates to: FFVQHSSIASVSRSAGPGRRKVQ*EVIHLS
Trigger: GGACAAGTGGATGACTTCTCACTGGACTTTCCTTCT...CCCTGGCCCTGCTGAGCGTGAAACAGAAGCAATGGATGAGTGCTGGACGAAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR TCA 90 bp TTCTTCGTCCAGCACTCATCCATTGCTTCTGTTTCACGCTCAGCAGGGCCAGGGACAGCCCTGTGTCTGTaGAGCCACTTTGCATTTTCT +
Preference number: 4 (lower is better)
Translates to: FFVQHSSIASVSRSAGPGTALCL*SHFAFS
Trigger: AGAAAATGCAAAGTGGCTTCACAGACACAGGGCTGT...CCCTGGCCCTGCTGAGCGTGAAACAGAAGCAATGGATGAGTGCTGGACGAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR TCA 90 bp TCCACGCTCTCCACAAACCTTCAAGGAAACGCCCCAGGGGCAGTGAATCGTCTCCTAGGGAAGAGAGACTaGGTTATGGAAAGGATGCTA +
Preference number: 4 (lower is better)
Translates to: STLSTNLQGNAPGAVNRLLGKRD*VMERML
Trigger: TAGCATCCTTTCCATAACTCAGTCTCTCTTCCCTAG...GAGACGATTCACTGCCCCTGGGGCGTTTCCTTGAAGGTTTGTGGAGAGCGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR TCA 90 bp GGCCTTTGGACCTGGGCATGGAGCTTTGGTCTCTTTGTTTGGAATCTACACTCAGCCAAGCAGTGGCTGTaGTCGTGTCTCAGGACTTTC +
Preference number: 4 (lower is better)
Translates to: GLWTWAWSFGLFVWNLHSAKQWL*SCLRTF
Trigger: GAAAGTCCTGAGACACGATCACAGCCACTGCTTGGC...TGAGTGTAGATTCCAAACAAAGAGACCAAAGCTCCATGCCCAGGTCCAAAGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR GCA 90 bp GCTCCCTATTTGTTCTGCCCAGGCCATTCTTCGTCCAGCACTCATCCATTGCTTCATGAGTGCAGAGGTTaGGGTACTTGCACCAATGGC +
Preference number: 4 (lower is better)
Translates to: APYLFCPGHSSSSTHPLLHECRG*GTCTNG
Trigger: GCCATTGGTGCAAGTACCGCAACCTCTGCACTCATG...AAGCAATGGATGAGTGCTGGACGAAGAATGGCCTGGGCAGAACAAATAGGGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR GCA 90 bp GTTGGTCTGCTTTCTTCCTTTGCTGGACCACTTTTCCTACAAAACTGGTACCCTACCTGCGCTCGCCGCTaGACCAGCCACACTCAAACT +
Preference number: 4 (lower is better)
Translates to: VGLLSSFAGPLFLQNWYPTCARR*TSHTQT
Trigger: AGTTTGAGTGTGGCTGGTGCAGCGGCGAGCGCAGGT...AGGGTACCAGTTTTGTAGGAAAAGTGGTCCAGCAAAGGAAGAAAGCAGACCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR GCA 90 bp GTTGGTCTGCTTTCTTCCTTTGCTGGACCACTTTTCCTACAAAACTGGTACCCTACTCGCAGGTCTGGTTaGCCAGGTAGACTGCCACGC +
Preference number: 4 (lower is better)
Translates to: VGLLSSFAGPLFLQNWYPTRRSG*PGRLPR
Trigger: GCGTGGCAGTCTACCTGGGCAACCAGACCTGCGAGT...AGGGTACCAGTTTTGTAGGAAAAGTGGTCCAGCAAAGGAAGAAAGCAGACCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR GCA 90 bp GTTGGTCTGCTTTCTTCCTTTGCTGGACCACTTTTCCTACAAAACTGGTACCCTTATTCCAGGCGGCCCTaGAGGCCGGTCATGATGAGC +
Preference number: 4 (lower is better)
Translates to: VGLLSSFAGPLFLQNWYPYSRRP*RPVMMS
Trigger: GCTCATCATGACCGGCCTGCAGGGCCGCCTGGAATA...AGGGTACCAGTTTTGTAGGAAAAGTGGTCCAGCAAAGGAAGAAAGCAGACCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR GCA 90 bp GTCTTGCCAAGCACCCTTCTGGGGTCCTCTTCCTTTTCCAGAGCATTGTCTCTTCATCTGTGTCATGGATaGTGTGCCTGTCTGCCTGCT +
Preference number: 4 (lower is better)
Translates to: VLPSTLLGSSSFSRALSLHLCHG*CACLPA
Trigger: AGCAGGCAGACAGGCACAGCATCCATGACACAGATG...AAGAGACAATGCTCTGGAAAAGGAAGAGGACCCCAGAAGGGTGCTTGGCAAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR GCA 90 bp AAGTTCCATACTCCTCTGGCTGCCGGGATAATTCCAGGTTTTACTGGCCTCTGTGACTCCAGTGCTGCTTaGAGAACAGTTGGAGCTGGC +
Preference number: 4 (lower is better)
Translates to: KFHTPLAAGIIPGFTGLCDSSAA*RTVGAG
Trigger: GCCAGCTCCAACTGTTCTGCAAGCAGCACTGGAGTC...ACAGAGGCCAGTAAAACCTGGAATTATCCCGGCAGCCAGAGGAGTATGGAACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR GCA 90 bp TTCTTCGTCCAGCACTCATCCATTGCTTCTGTTTCACGCTCAGCAGGGCCAGGGGTAACTGCTGGGAGATaGCAGGTAGATGCATTGAGT +
Preference number: 4 (lower is better)
Translates to: FFVQHSSIASVSRSAGPGVTAGR*QVDALS
Trigger: ACTCAATGCATCTACCTGGCATCTCCCAGCAGTTAC...CCCTGGCCCTGCTGAGCGTGAAACAGAAGCAATGGATGAGTGCTGGACGAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR GCA 90 bp GCAGCCAGAAGAGATGGTGGCAGTAGAAACAAGAGCAGCTCTCATCGCTGGGGGTCCCAGATGAATGAATaGAGGAAACAGTTCCCTCCT +
Preference number: 4 (lower is better)
Translates to: AARRDGGSRNKSSSHRWGSQMNE*RKQFPP
Trigger: AGGAGGGAACTGTTTCCTGCATTCATTCATCTGGGA...CCCCCAGCGATGAGAGCTGCTCTTGTTTCTACTGCCACCATCTCTTCTGGCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR GCA 90 bp AAGTTCCATACTCCTCTGGCTGCCGGGATAATTCCAGGTTTTACTGGCCTCTGTGCGTGGCAACCGGGATaGACCTGGAGATTTATCAGC +
Preference number: 4 (lower is better)
Translates to: KFHTPLAAGIIPGFTGLCAWQPG*TWRFIS
Trigger: GCTGATAAATCTCCAGGTGCATCCCGGTTGCCACGC...ACAGAGGCCAGTAAAACCTGGAATTATCCCGGCAGCCAGAGGAGTATGGAACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR GCA 90 bp GCAGCCAGAAGAGATGGTGGCAGTAGAAACAAGAGCAGCTCTCATCGCTGGGGGAAGGGAGAGCTTCTCTaGTGTGAGAAGAATGAGATG +
Preference number: 4 (lower is better)
Translates to: AARRDGGSRNKSSSHRWGKGELL*CEKNEM
Trigger: CATCTCATTCTTCTCACAGCAGAGAAGCTCTCCCTT...CCCCCAGCGATGAGAGCTGCTCTTGTTTCTACTGCCACCATCTCTTCTGGCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR GCA 90 bp CCCACTGGCTTCTATGGGGCCTTTGGACCTGGGCATGGAGCTTTGGTCTCTTTGTATTTCCATTCTGCCTaGCACCTTCCATGCCAAGAT +
Preference number: 4 (lower is better)
Translates to: PTGFYGAFGPGHGALVSLYFHSA*HLPCQD
Trigger: ATCTTGGCATGGAAGGTGGCAGGCAGAATGGAAATA...CAAAGAGACCAAAGCTCCATGCCCAGGTCCAAAGGCCCCATAGAAGCCAGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp TCTGCTTTCTTCCTTTGCTGGACCACTTTTCCTACAAAACTGGTACCCTGTGCCGTGATATTGAAGGCCTaGGCCAGTGAGTCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: SAFFLCWTTFPTKLVPCAVILKA*ASESPG
Trigger: GCCTGGGGACTCACTGGCCCAGGCCTTCAATATCAC...GGCACAGGGTACCAGTTTTGTAGGAAAAGTGGTCCAGCAAAGGAAGAAAGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp GTCTTGCCAAGCACCCTTCTGGGGTCCTCTTCCTTTTCCAGAGCATTGTCTCTTAGAAGTTATCATCGATaGGGACAGGCGCCTTGGTGC +
Preference number: 4 (lower is better)
Translates to: VLPSTLLGSSSFSRALSLRSYHR*GQAPWC
Trigger: GCACCAAGGCGCCTGTCCCCATCGATGATAACTTCT...AAGAGACAATGCTCTGGAAAAGGAAGAGGACCCCAGAAGGGTGCTTGGCAAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp GAGAAGTCATCCACTTGTCCTTCACACTCACAAGTCCGTGAGAGGCAGAAAGAGGGTAGCGCTGATCAATaGAGAAGGCCATGTCCCGGA +
Preference number: 4 (lower is better)
Translates to: EKSSTCPSHSQVRERQKEGSADQ*RRPCPG
Trigger: TCCGGGACATGGCCTTCTCCATTGATCAGCGCTACC...CTCTTTCTGCCTCTCACGGACTTGTGAGTGTGAAGGACAAGTGGATGACTTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp CAACCGGGATGCACCTGGAGATTTATCAGCCAGAAGCTTTCAAATGCTCCCTATAGAGCGGGGACCCGGTaGATGGCTCCTTGTATGTTG +
Preference number: 4 (lower is better)
Translates to: QPGCTWRFISQKLSNAPYRAGTR*MAPCML
Trigger: CAACATACAAGGAGCCATCCACCGGGTCCCCGCTCT...ATAGGGAGCATTTGAAAGCTTCTGGCTGATAAATCTCCAGGTGCATCCCGGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp GTTGGTCTGCTTTCTTCCTTTGCTGGACCACTTTTCCTACAAAACTGGTACCCTAGTCGAGCCAGGGGCTaGAAGGGCTGGTACAGTGCT +
Preference number: 4 (lower is better)
Translates to: VGLLSSFAGPLFLQNWYPSRARG*KGWYSA
Trigger: AGCACTGTACCAGCCCTTCCAGCCCCTGGCTCGACT...AGGGTACCAGTTTTGTAGGAAAAGTGGTCCAGCAAAGGAAGAAAGCAGACCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp CAACCGGGATGCACCTGGAGATTTATCAGCCAGAAGCTTTCAAATGCTCCCTATGGTTCACGCCATGGATaGTCACTCGCGTCCCTCCTT +
Preference number: 4 (lower is better)
Translates to: QPGCTWRFISQKLSNAPYGSRHG*SLASLL
Trigger: AAGGAGGGACGCGAGTGACCATCCATGGCGTGAACC...ATAGGGAGCATTTGAAAGCTTCTGGCTGATAAATCTCCAGGTGCATCCCGGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp GTTGGTCTGCTTTCTTCCTTTGCTGGACCACTTTTCCTACAAAACTGGTACCCTCCCAGGTTCACGCCATaGATGGTCACTCGCGTCCCT +
Preference number: 4 (lower is better)
Translates to: VGLLSSFAGPLFLQNWYPPRFTP*MVTRVP
Trigger: AGGGACGCGAGTGACCATCCATGGCGTGAACCTGGG...AGGGTACCAGTTTTGTAGGAAAAGTGGTCCAGCAAAGGAAGAAAGCAGACCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp GGCCTTTGGACCTGGGCATGGAGCTTTGGTCTCTTTGTTTGGAATCTACACTCACGCACATCTGTGTCATaGATGCTGTGCCTGTCTGCC +
Preference number: 4 (lower is better)
Translates to: GLWTWAWSFGLFVWNLHSRTSVS*MLCLSA
Trigger: GGCAGACAGGCACAGCATCCATGACACAGATGTGCG...TGAGTGTAGATTCCAAACAAAGAGACCAAAGCTCCATGCCCAGGTCCAAAGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp GACAGCGATCCAAAGCTACACGCCAAGGATGGAAGCCAGACCTCTGCGCTCCCCATTTGTGCAAAGTTCTaGAAGTTCCATACTCCTCTG +
Preference number: 4 (lower is better)
Translates to: DSDPKLHAKDGSQTSALPICAKF*KFHTPL
Trigger: CAGAGGAGTATGGAACTTCCAGAACTTTGCACAAAT...GGGGAGCGCAGAGGTCTGGCTTCCATCCTTGGCGTGTAGCTTTGGATCGCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp GACAGCGATCCAAAGCTACACGCCAAGGATGGAAGCCAGACCTCTGCGCTCCCCAAAGTGGCCTTGGCATaGCTGGTTGTGAATTATAAT +
Preference number: 4 (lower is better)
Translates to: DSDPKLHAKDGSQTSALPKVALA*LVVNYN
Trigger: ATTATAATTCACAACCAGCCATGCCAAGGCCACTTT...GGGGAGCGCAGAGGTCTGGCTTCCATCCTTGGCGTGTAGCTTTGGATCGCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp CCTCTGTCTTGCCAAGCACCCTTCTGGGGTCCTCTTCCTTTTCCAGAGCATTGTGACTTCATTGGTTCTTaGTGGCCCAAAGCGAAGAGG +
Preference number: 4 (lower is better)
Translates to: PLSCQAPFWGPLPFPEHCDFIGS*WPKAKR
Trigger: CCTCTTCGCTTTGGGCCACCAAGAACCAATGAAGTC...ACAATGCTCTGGAAAAGGAAGAGGACCCCAGAAGGGTGCTTGGCAAGACAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp CCCACTGGCTTCTATGGGGCCTTTGGACCTGGGCATGGAGCTTTGGTCTCTTTGGAAACGAAGCGAAGCTaGATAGACTTTGGAGAGAGA +
Preference number: 4 (lower is better)
Translates to: PTGFYGAFGPGHGALVSLETKRS*IDFGER
Trigger: TCTCTCTCCAAAGTCTATCCAGCTTCGCTTCGTTTC...CAAAGAGACCAAAGCTCCATGCCCAGGTCCAAAGGCCCCATAGAAGCCAGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR TCA 90 bp GCTCCCTATTTGTTCTGCCCAGGCCATTCTTCGTCCAGCACTCATCCATTGCTTCACTGGTCAACTCATTaGTATCCGTCTGGAGCTCAG +
Preference number: 4 (lower is better)
Translates to: APYLFCPGHSSSSTHPLLHWSTH*YPSGAQ
Trigger: CTGAGCTCCAGACGGATATCAATGAGTTGACCAGTG...AAGCAATGGATGAGTGCTGGACGAAGAATGGCCTGGGCAGAACAAATAGGGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR TCA 90 bp GTTGGTCTGCTTTCTTCCTTTGCTGGACCACTTTTCCTACAAAACTGGTACCCTTGGCACAGTATAGCATaGAGAGTGGCTCCCCTGCGC +
Preference number: 4 (lower is better)
Translates to: VGLLSSFAGPLFLQNWYPWHSIA*RVAPLR
Trigger: GCGCAGGGGAGCCACTCTTCATGCTATACTGTGCCA...AGGGTACCAGTTTTGTAGGAAAAGTGGTCCAGCAAAGGAAGAAAGCAGACCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR TCA 90 bp CAACCGGGATGCACCTGGAGATTTATCAGCCAGAAGCTTTCAAATGCTCCCTATTCTCGTTGTCAGGGTTaGCGCAGTTCAGGATCAGGG +
Preference number: 4 (lower is better)
Translates to: QPGCTWRFISQKLSNAPYSRCQG*RSSGSG
Trigger: CCCTGATCCTGAACTGCGTCAACCCTGACAACGAGA...ATAGGGAGCATTTGAAAGCTTCTGGCTGATAAATCTCCAGGTGCATCCCGGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR TCA 90 bp GAGAAGTCATCCACTTGTCCTTCACACTCACAAGTCCGTGAGAGGCAGAAAGAGACACTCACAAGTCCGTaGGAGGCAGAAAGAGAGGCA +
Preference number: 4 (lower is better)
Translates to: EKSSTCPSHSQVRERQKETLTSP*EAEREA
Trigger: TGCCTCTCTTTCTGCCTCTCACGGACTTGTGAGTGT...CTCTTTCTGCCTCTCACGGACTTGTGAGTGTGAAGGACAAGTGGATGACTTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR TCA 90 bp GCAGCCAGAAGAGATGGTGGCAGTAGAAACAAGAGCAGCTCTCATCGCTGGGGGAAGAAGGTTCCCAGATaGATGAATGCAGGAAACAGT +
Preference number: 4 (lower is better)
Translates to: AARRDGGSRNKSSSHRWGKKVPR*MNAGNS
Trigger: ACTGTTTCCTGCATTCATTCATCTGGGAACCTTCTT...CCCCCAGCGATGAGAGCTGCTCTTGTTTCTACTGCCACCATCTCTTCTGGCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR GCA 90 bp GAGAAGTCATCCACTTGTCCTTCACACTCACAAGTCCGTGAGAGGCAGAAAGAGCCACAAGTCGTATACTaGTCACATGACTCCACGGGG +
Preference number: 4 (lower is better)
Translates to: EKSSTCPSHSQVRERQKEPQVVY*SHDSTG
Trigger: CCCCGTGGAGTCATGTGAGCAGTATACGACTTGTGG...CTCTTTCTGCCTCTCACGGACTTGTGAGTGTGAAGGACAAGTGGATGACTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR GCA 90 bp CAACCGGGATGCACCTGGAGATTTATCAGCCAGAAGCTTTCAAATGCTCCCTATGAGATGCTGCTGGGATaGACTGCAAGGCTCACACAC +
Preference number: 4 (lower is better)
Translates to: QPGCTWRFISQKLSNAPYEMLLG*TARLTH
Trigger: GTGTGTGAGCCTTGCAGTGCATCCCAGCAGCATCTC...ATAGGGAGCATTTGAAAGCTTCTGGCTGATAAATCTCCAGGTGCATCCCGGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR GCA 90 bp GTCTTGCCAAGCACCCTTCTGGGGTCCTCTTCCTTTTCCAGAGCATTGTCTCTTCTAAGCAACCGGCTGTaGTCAGATACTGAGATGCTG +
Preference number: 4 (lower is better)
Translates to: VLPSTLLGSSSFSRALSLLSNRL*SDTEML
Trigger: CAGCATCTCAGTATCTGAGCACAGCCGGTTGCTTAG...AAGAGACAATGCTCTGGAAAAGGAAGAGGACCCCAGAAGGGTGCTTGGCAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR GCA 90 bp AACCAGCTTCCTGAAGGATATAAATTCGCTGGAAGAAAGACCTTGGTTTTGTTCCGGGGTGGTCCTCGATaGCCGGGAACAGGACTCGCA +
Preference number: 4 (lower is better)
Translates to: NQLPEGYKFAGRKTLVLFRGGPR*PGTGLA
Trigger: TGCGAGTCCTGTTCCCGGGCATCGAGGACCACCCCG...GAACAAAACCAAGGTCTTTCTTCCAGCGAATTTATATCCTTCAGGAAGCTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR GCA 90 bp TCTGCTTTCTTCCTTTGCTGGACCACTTTTCCTACAAAACTGGTACCCTGTGCCTTCTCCACGTGCTGCTaGCCGTTTCCTTGTACCTCC +
Preference number: 4 (lower is better)
Translates to: SAFFLCWTTFPTKLVPCAFSTCC*PFPCTS
Trigger: GGAGGTACAAGGAAACGGGCAGCAGCACGTGGAGAA...GGCACAGGGTACCAGTTTTGTAGGAAAAGTGGTCCAGCAAAGGAAGAAAGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR GCA 90 bp GTTGGTCTGCTTTCTTCCTTTGCTGGACCACTTTTCCTACAAAACTGGTACCCTGCAGAGGGAGGCAGTTaGTTTTCCAGGTGTGCCGCA +
Preference number: 4 (lower is better)
Translates to: VGLLSSFAGPLFLQNWYPAEGGS*FSRCAA
Trigger: TGCGGCACACCTGGAAAAGCAACTGCCTCCCTCTGC...AGGGTACCAGTTTTGTAGGAAAAGTGGTCCAGCAAAGGAAGAAAGCAGACCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR GCA 90 bp GAGGCAGAACTGTCCCCAGCTCGTGCCTCTCGGCTTGAAGAACCACCTTCTCCCCTGATAAGCTTTGAGTaGTATGAAGAGCAAACACTT +
Preference number: 4 (lower is better)
Translates to: EAELSPARASRLEEPPSPLISFE*YEEQTL
Trigger: AAGTGTTTGCTCTTCATAGCACTCAAAGCTTATCAG...GGGAGAAGGTGGTTCTTCAAGCCGAGAGGCACGAGCTGGGGACAGTTCTGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR GCA 90 bp GGCCTTTGGACCTGGGCATGGAGCTTTGGTCTCTTTGTTTGGAATCTACACTCACAGTCTGAGCAGCCATaGGGCCAGAAAATCTTCACC +
Preference number: 4 (lower is better)
Translates to: GLWTWAWSFGLFVWNLHSQSEQP*GQKIFT
Trigger: GGTGAAGATTTTCTGGCCGCATGGCTGCTCAGACTG...TGAGTGTAGATTCCAAACAAAGAGACCAAAGCTCCATGCCCAGGTCCAAAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp GGCCTTTGGACCTGGGCATGGAGCTTTGGTCTCTTTGTTTGGAATCTACACTCACGTATGAGTGGAACTTaGGGTCATCCTTGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: GLWTWAWSFGLFVWNLHSRMSGT*GHPCRA
Trigger: GGCTCTGCAAGGATGACCCCAAGTTCCACTCATACG...TGAGTGTAGATTCCAAACAAAGAGACCAAAGCTCCATGCCCAGGTCCAAAGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp CAAGCACCCTTCTGGGGTCCTCTTCCTTTTCCAGAGCATTGTCTCTTGTGCAGAATTGCCAGGGACCACTaGATGATTGGAGTGAACTCC +
Preference number: 4 (lower is better)
Translates to: QAPFWGPLPFPEHCLLCRIARDH*MIGVNS
Trigger: GGAGTTCACTCCAATCATCCAGTGGTCCCTGGCAAT...TCTGCACAAGAGACAATGCTCTGGAAAAGGAAGAGGACCCCAGAAGGGTGCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp GTCTTGCCAAGCACCCTTCTGGGGTCCTCTTCCTTTTCCAGAGCATTGTCTCTTTCTCCACCCTCCAATTaGCCATTGCCCCATCATTCT +
Preference number: 4 (lower is better)
Translates to: VLPSTLLGSSSFSRALSLSPPSN*PLPHHS
Trigger: AGAATGATGGGGCAATGGCCAATTGGAGGGTGGAGA...AAGAGACAATGCTCTGGAAAAGGAAGAGGACCCCAGAAGGGTGCTTGGCAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp GCTCCCTATTTGTTCTGCCCAGGCCATTCTTCGTCCAGCACTCATCCATTGCTTTTCACCCTCATGGCGTaGCTTGAGTCCAGCTTTTTC +
Preference number: 4 (lower is better)
Translates to: APYLFCPGHSSSSTHPLLFTLMA*LESSFF
Trigger: GAAAAAGCTGGACTCAAGCCACGCCATGAGGGTGAA...AAGCAATGGATGAGTGCTGGACGAAGAATGGCCTGGGCAGAACAAATAGGGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp GGCCTTTGGACCTGGGCATGGAGCTTTGGTCTCTTTGTTTGGAATCTACACTCAAACCTTTCACCCTCATaGCGTGGCTTGAGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: GLWTWAWSFGLFVWNLHSNLSPS*RGLSPA
Trigger: AGCTGGACTCAAGCCACGCCATGAGGGTGAAAGGTT...TGAGTGTAGATTCCAAACAAAGAGACCAAAGCTCCATGCCCAGGTCCAAAGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp GAGAAGTCATCCACTTGTCCTTCACACTCACAAGTCCGTGAGAGGCAGAAAGAGTTGAGAGCCCTGCTGTaGAGAGAGGTAGGACAGCAA +
Preference number: 4 (lower is better)
Translates to: EKSSTCPSHSQVRERQKELRALL*REVGQQ
Trigger: TTGCTGTCCTACCTCTCTCCACAGCAGGGCTCTCAA...CTCTTTCTGCCTCTCACGGACTTGTGAGTGTGAAGGACAAGTGGATGACTTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp TCTGCTTTCTTCCTTTGCTGGACCACTTTTCCTACAAAACTGGTACCCTGTGCCGTGGCTGGCAGACAGTaGCTACTCAAGAAGGTTCCC +
Preference number: 4 (lower is better)
Translates to: SAFFLCWTTFPTKLVPCAVAGRQ*LLKKVP
Trigger: GGGAACCTTCTTGAGTAGCCACTGTCTGCCAGCCAC...GGCACAGGGTACCAGTTTTGTAGGAAAAGTGGTCCAGCAAAGGAAGAAAGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp GCTCCCTATTTGTTCTGCCCAGGCCATTCTTCGTCCAGCACTCATCCATTGCTTCAACCGGGATGCACCTaGAGATTTATCAGCCAGAAG +
Preference number: 4 (lower is better)
Translates to: APYLFCPGHSSSSTHPLLQPGCT*RFISQK
Trigger: CTTCTGGCTGATAAATCTCCAGGTGCATCCCGGTTG...AAGCAATGGATGAGTGCTGGACGAAGAATGGCCTGGGCAGAACAAATAGGGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp AAGTTCCATACTCCTCTGGCTGCCGGGATAATTCCAGGTTTTACTGGCCTCTGTCTCCAGTTTGCTTATTaGGTGGAGGCCCTGTATGCC +
Preference number: 4 (lower is better)
Translates to: KFHTPLAAGIIPGFTGLCLQFAY*VEALYA
Trigger: GGCATACAGGGCCTCCACCCAATAAGCAAACTGGAG...ACAGAGGCCAGTAAAACCTGGAATTATCCCGGCAGCCAGAGGAGTATGGAACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp CAACCGGGATGCACCTGGAGATTTATCAGCCAGAAGCTTTCAAATGCTCCCTATCGGCCCCTAGTCTCATaGGATAGAGAGCTTGTCCCT +
Preference number: 4 (lower is better)
Translates to: QPGCTWRFISQKLSNAPYRPLVS*DRELVP
Trigger: AGGGACAAGCTCTCTATCCCATGAGACTAGGGGCCG...ATAGGGAGCATTTGAAAGCTTCTGGCTGATAAATCTCCAGGTGCATCCCGGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR CAA 72 bp ATTGCTTCTGTTTCACGCTCAGCAGGGCCAGGGGTCTaGACTGCTATTTCCTGTCCTCATTTGGTGGAACTG +
Preference number: 4 (lower is better)
Translates to: IASVSRSAGPGV*TAISCPHLVEL
Trigger: CAGTTCCACCAAATGAGGACAGGAAATAGCAGTCAAGACCCCTGGCCCTGCTGAGCGTGAAACAGAAGCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR TCA 90 bp GTTGGTCTGCTTTCTTCCTTTGCTGGACCACTTTTCCTACAAAACTGGTACCCTTCTCGGGCTGGACAGTaGGAAAGTAGACAAAGCCCC +
Preference number: 4 (lower is better)
Translates to: VGLLSSFAGPLFLQNWYPSRAGQ*ESRQSP
Trigger: GGGGCTTTGTCTACTTTCTCACTGTCCAGCCCGAGA...AGGGTACCAGTTTTGTAGGAAAAGTGGTCCAGCAAAGGAAGAAAGCAGACCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR TCA 90 bp TACTATCTAGGTACACATCTCCTCTCAAAAGATGAGAATATACAGGTGTGTGGTGGTCTCCAGCGGAGTTaGTGGCCACACCCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: YYLGTHLLSKDENIQVCGGLQRS*WPHPQG
Trigger: CCCCTGAGGGTGTGGCCATCAACTCCGCTGGAGACC...ACCACACACCTGTATATTCTCATCTTTTGAGAGGAGATGTGTACCTAGATAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR TCA 90 bp GTTGGTCTGCTTTCTTCCTTTGCTGGACCACTTTTCCTACAAAACTGGTACCCTGGCGATCCTGGCTTTTaGTCCAAGACTCCAGTAGGG +
Preference number: 4 (lower is better)
Translates to: VGLLSSFAGPLFLQNWYPGDPGF*SKTPVG
Trigger: CCCTACTGGAGTCTTGGATCAAAAGCCAGGATCGCC...AGGGTACCAGTTTTGTAGGAAAAGTGGTCCAGCAAAGGAAGAAAGCAGACCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR TCA 90 bp GTTGGTCTGCTTTCTTCCTTTGCTGGACCACTTTTCCTACAAAACTGGTACCCTCGCCTTTCCTCTCGATaGCTCCCACTGGCTTCTATG +
Preference number: 4 (lower is better)
Translates to: VGLLSSFAGPLFLQNWYPRLSSR*LPLASM
Trigger: CATAGAAGCCAGTGGGAGTCATCGAGAGGAAAGGCG...AGGGTACCAGTTTTGTAGGAAAAGTGGTCCAGCAAAGGAAGAAAGCAGACCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR GCA 90 bp TCTGCTTTCTTCCTTTGCTGGACCACTTTTCCTACAAAACTGGTACCCTGTGCCGCTTCCTTCCCTTCTTaGTCTCCGGTTCGTTCACAG +
Preference number: 4 (lower is better)
Translates to: SAFFLCWTTFPTKLVPCAASFPS*SPVRSQ
Trigger: CTGTGAACGAACCGGAGAGCAAGAAGGGAAGGAAGC...GGCACAGGGTACCAGTTTTGTAGGAAAAGTGGTCCAGCAAAGGAAGAAAGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR GCA 90 bp TCTGCTTTCTTCCTTTGCTGGACCACTTTTCCTACAAAACTGGTACCCTGTGCCCCTGGATGGTCAGGTTaGCTGTCAGCTTATAGACCC +
Preference number: 4 (lower is better)
Translates to: SAFFLCWTTFPTKLVPCAPGWSG*LSAYRP
Trigger: GGGTCTATAAGCTGACAGGCAACCTGACCATCCAGG...GGCACAGGGTACCAGTTTTGTAGGAAAAGTGGTCCAGCAAAGGAAGAAAGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR GCA 90 bp GCTCCCTATTTGTTCTGCCCAGGCCATTCTTCGTCCAGCACTCATCCATTGCTTTTTCTACTGAGGAAGTaGTGTAGGCCCAGATGGTCA +
Preference number: 4 (lower is better)
Translates to: APYLFCPGHSSSSTHPLLFLLRK*CRPRWS
Trigger: TGACCATCTGGGCCTACAGCACTTCCTCAGTAGAAA...AAGCAATGGATGAGTGCTGGACGAAGAATGGCCTGGGCAGAACAAATAGGGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp CAAGCACCCTTCTGGGGTCCTCTTCCTTTTCCAGAGCATTGTCTCTTGTGCAGACTTTACCTCCCCGACTaGAATCAAGATCTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: QAPFWGPLPFPEHCLLCRLYLPD*NQDLLC
Trigger: ACAGAGGAGATCTTGATTCCAGTCGGGGAGGTAAAG...TCTGCACAAGAGACAATGCTCTGGAAAAGGAAGAGGACCCCAGAAGGGTGCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp CCCACTGGCTTCTATGGGGCCTTTGGACCTGGGCATGGAGCTTTGGTCTCTTTGAATTCCAGGTTTTACTaGCCTCTGTTTTTGCGAAGT +
Preference number: 4 (lower is better)
Translates to: PTGFYGAFGPGHGALVSLNSRFY*PLFLRS
Trigger: ACTTCGCAAAAACAGAGGCCAGTAAAACCTGGAATT...CAAAGAGACCAAAGCTCCATGCCCAGGTCCAAAGGCCCCATAGAAGCCAGTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp GACACTCACAGAGCGCCTTTCCTCTCGATGACTCCCACTGGCTTCTATGGGGCCTACACTCAGGAGAATTaGTTATCCATAGTTTTAGGC +
Preference number: 4 (lower is better)
Translates to: DTHRAPFLSMTPTGFYGAYTQEN*LSIVLG
Trigger: GCCTAAAACTATGGATAACCAATTCTCCTGAGTGTA...GGCCCCATAGAAGCCAGTGGGAGTCATCGAGAGGAAAGGCGCTCTGTGAGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp TCTGCTTTCTTCCTTTGCTGGACCACTTTTCCTACAAAACTGGTACCCTGTGCCTGTTGCCTGCTAAGTTaGTGGCAGGAACCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: SAFFLCWTTFPTKLVPCACCLLS*WQEPAS
Trigger: GGAAGCTGGTTCCTGCCACCAACTTAGCAGGCAACA...GGCACAGGGTACCAGTTTTGTAGGAAAAGTGGTCCAGCAAAGGAAGAAAGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR TCA 90 bp TACTATCTAGGTACACATCTCCTCTCAAAAGATGAGAATATACAGGTGTGTGGTCAGCACCCAGACCACTaGGAGCAGGACCACAGAGCG +
Preference number: 4 (lower is better)
Translates to: YYLGTHLLSKDENIQVCGQHPDH*EQDHRA
Trigger: CGCTCTGTGGTCCTGCTCTCAGTGGTCTGGGTGCTG...ACCACACACCTGTATATTCTCATCTTTTGAGAGGAGATGTGTACCTAGATAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR TCA 90 bp TCTGCTTTCTTCCTTTGCTGGACCACTTTTCCTACAAAACTGGTACCCTGTGCCTGGCTCCTTGTATGTTaGGGACACACTCATAGCCTC +
Preference number: 4 (lower is better)
Translates to: SAFFLCWTTFPTKLVPCAWLLVC*GHTHSL
Trigger: GAGGCTATGAGTGTGTCCTCAACATACAAGGAGCCA...GGCACAGGGTACCAGTTTTGTAGGAAAAGTGGTCCAGCAAAGGAAGAAAGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR TCA 90 bp GTCTTGCCAAGCACCCTTCTGGGGTCCTCTTCCTTTTCCAGAGCATTGTCTCTTAAAATCTCGGTGATTTaGGGGTTGGAGCACTTGACA +
Preference number: 4 (lower is better)
Translates to: VLPSTLLGSSSFSRALSLKISVI*GLEHLT
Trigger: TGTCAAGTGCTCCAACCCTCAAATCACCGAGATTTT...AAGAGACAATGCTCTGGAAAAGGAAGAGGACCCCAGAAGGGTGCTTGGCAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR TCA 90 bp GTCTTGCCAAGCACCCTTCTGGGGTCCTCTTCCTTTTCCAGAGCATTGTCTCTTTCTTGTGCAGATCAATaGAACGAAGCGAAGCTGGAT +
Preference number: 4 (lower is better)
Translates to: VLPSTLLGSSSFSRALSLSCADQ*NEAKLD
Trigger: ATCCAGCTTCGCTTCGTTTCATTGATCTGCACAAGA...AAGAGACAATGCTCTGGAAAAGGAAGAGGACCCCAGAAGGGTGCTTGGCAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR TCA 90 bp AACCAGCTTCCTGAAGGATATAAATTCGCTGGAAGAAAGACCTTGGTTTTGTTCAAGCACAGAAGCACCTaGCCCCATGCAGAGGACGGG +
Preference number: 4 (lower is better)
Translates to: NQLPEGYKFAGRKTLVLFKHRST*PHAEDG
Trigger: CCCGTCCTCTGCATGGGGTCAGGTGCTTCTGTGCTT...GAACAAAACCAAGGTCTTTCTTCCAGCGAATTTATATCCTTCAGGAAGCTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR TCA 90 bp GGCCTTTGGACCTGGGCATGGAGCTTTGGTCTCTTTGTTTGGAATCTACACTCACTCATTTGGTGGAACTaGAGGAAGGTCAGAAGCTCA +
Preference number: 4 (lower is better)
Translates to: GLWTWAWSFGLFVWNLHSLIWWN*RKVRSS
Trigger: TGAGCTTCTGACCTTCCTTCAGTTCCACCAAATGAG...TGAGTGTAGATTCCAAACAAAGAGACCAAAGCTCCATGCCCAGGTCCAAAGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR GCA 90 bp TACTATCTAGGTACACATCTCCTCTCAAAAGATGAGAATATACAGGTGTGTGGTAAAATTCCCAGCAACTaGCCTCCGCCGCCCTCCCGC +
Preference number: 4 (lower is better)
Translates to: YYLGTHLLSKDENIQVCGKIPSN*PPPPSR
Trigger: GCGGGAGGGCGGCGGAGGGCAGTTGCTGGGAATTTT...ACCACACACCTGTATATTCTCATCTTTTGAGAGGAGATGTGTACCTAGATAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR GCA 90 bp TACTATCTAGGTACACATCTCCTCTCAAAAGATGAGAATATACAGGTGTGTGGTGGACAGGCGCCTTGGTaGACTGGACGTCCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: YYLGTHLLSKDENIQVCGGQAPW*TGRPSP
Trigger: TGGGGAAGGACGTCCAGTGCACCAAGGCGCCTGTCC...ACCACACACCTGTATATTCTCATCTTTTGAGAGGAGATGTGTACCTAGATAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR GCA 90 bp GCTCCCTATTTGTTCTGCCCAGGCCATTCTTCGTCCAGCACTCATCCATTGCTTGTCTCTCAGCATCTCTaGTTTCTCTGGCATTTGGAA +
Preference number: 4 (lower is better)
Translates to: APYLFCPGHSSSSTHPLLVSQHL*FLWHLE
Trigger: TTCCAAATGCCAGAGAAAGCAGAGATGCTGAGAGAC...AAGCAATGGATGAGTGCTGGACGAAGAATGGCCTGGGCAGAACAAATAGGGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR GCA 90 bp CAACCGGGATGCACCTGGAGATTTATCAGCCAGAAGCTTTCAAATGCTCCCTATCTCTCCTGGAGCAGCTaGTGGATCAGTATTTACCAG +
Preference number: 4 (lower is better)
Translates to: QPGCTWRFISQKLSNAPYLSWSS*WISIYQ
Trigger: CTGGTAAATACTGATCCAGCAGCTGCTCCAGGAGAG...ATAGGGAGCATTTGAAAGCTTCTGGCTGATAAATCTCCAGGTGCATCCCGGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp CAACCGGGATGCACCTGGAGATTTATCAGCCAGAAGCTTTCAAATGCTCCCTATTTTCCTCCGGGAGCCTaGCTTTCCAGATCTATTTCG +
Preference number: 4 (lower is better)
Translates to: QPGCTWRFISQKLSNAPYFPPGA*LSRSIS
Trigger: CGAAATAGATCTGGAAAGCCAGGCTCCCGGAGGAAA...ATAGGGAGCATTTGAAAGCTTCTGGCTGATAAATCTCCAGGTGCATCCCGGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp CAACCGGGATGCACCTGGAGATTTATCAGCCAGAAGCTTTCAAATGCTCCCTATAGGGACACGTATGAGTaGAACTTGGGGTCATCCTTG +
Preference number: 4 (lower is better)
Translates to: QPGCTWRFISQKLSNAPYRDTYE*NLGSSL
Trigger: CAAGGATGACCCCAAGTTCCACTCATACGTGTCCCT...ATAGGGAGCATTTGAAAGCTTCTGGCTGATAAATCTCCAGGTGCATCCCGGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp GGCCTTTGGACCTGGGCATGGAGCTTTGGTCTCTTTGTTTGGAATCTACACTCAGCCCTTTGGAGAAGATaGCAAAGAGTACATCGTCCT +
Preference number: 4 (lower is better)
Translates to: GLWTWAWSFGLFVWNLHSALWRR*QRVHRP
Trigger: AGGACGATGTACTCTTTGCCATCTTCTCCAAAGGGC...TGAGTGTAGATTCCAAACAAAGAGACCAAAGCTCCATGCCCAGGTCCAAAGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp CAAGCACCCTTCTGGGGTCCTCTTCCTTTTCCAGAGCATTGTCTCTTGTGCAGAACTGCTTCTGCCCTTTaGAGAAGATGGCAAAGAGTA +
Preference number: 4 (lower is better)
Translates to: QAPFWGPLPFPEHCLLCRTASAL*RRWQRV
Trigger: TACTCTTTGCCATCTTCTCCAAAGGGCAGAAGCAGT...TCTGCACAAGAGACAATGCTCTGGAAAAGGAAGAGGACCCCAGAAGGGTGCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp AACCAGCTTCCTGAAGGATATAAATTCGCTGGAAGAAAGACCTTGGTTTTGTTCGGTTCCCAGGCCTGTTaGCATTTGTCCCTGCGGGAG +
Preference number: 4 (lower is better)
Translates to: NQLPEGYKFAGRKTLVLFGSQAC*HLSLRE
Trigger: CTCCCGCAGGGACAAATGCCAACAGGCCTGGGAACC...GAACAAAACCAAGGTCTTTCTTCCAGCGAATTTATATCCTTCAGGAAGCTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp GTTGGTCTGCTTTCTTCCTTTGCTGGACCACTTTTCCTACAAAACTGGTACCCTATGACGAAACTTGGCTaGCGTAGGGAGAGGAGTCCT +
Preference number: 4 (lower is better)
Translates to: VGLLSSFAGPLFLQNWYPMTKLG*RRERSP
Trigger: AGGACTCCTCTCCCTACGCCAGCCAAGTTTCGTCAT...AGGGTACCAGTTTTGTAGGAAAAGTGGTCCAGCAAAGGAAGAAAGCAGACCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp GAGAAGTCATCCACTTGTCCTTCACACTCACAAGTCCGTGAGAGGCAGAAAGAGCTGCCTTTAACTTCTTaGTGGAGCAAAGCCTGGATG +
Preference number: 4 (lower is better)
Translates to: EKSSTCPSHSQVRERQKELPLTS*WSKAWM
Trigger: CATCCAGGCTTTGCTCCACCAAGAAGTTAAAGGCAG...CTCTTTCTGCCTCTCACGGACTTGTGAGTGTGAAGGACAAGTGGATGACTTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp AAGTTCCATACTCCTCTGGCTGCCGGGATAATTCCAGGTTTTACTGGCCTCTGTTCCCCAAGTCTCTCATaGAATCCTGAGAAATGTGGC +
Preference number: 4 (lower is better)
Translates to: KFHTPLAAGIIPGFTGLCSPSLS*NPEKCG
Trigger: GCCACATTTCTCAGGATTCCATGAGAGACTTGGGGA...ACAGAGGCCAGTAAAACCTGGAATTATCCCGGCAGCCAGAGGAGTATGGAACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR TCA 90 bp CCTCTGTCTTGCCAAGCACCCTTCTGGGGTCCTCTTCCTTTTCCAGAGCATTGTTGGCATGGCTGGTTGTaGATTATAATGAAAACAGCA +
Preference number: 4 (lower is better)
Translates to: PLSCQAPFWGPLPFPEHCWHGWL*IIMKTA
Trigger: TGCTGTTTTCATTATAATTCACAACCAGCCATGCCA...ACAATGCTCTGGAAAAGGAAGAGGACCCCAGAAGGGTGCTTGGCAAGACAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR TCA 90 bp GGCCTTTGGACCTGGGCATGGAGCTTTGGTCTCTTTGTTTGGAATCTACACTCACCTTCCATGCCAAGATaGAGGCCAAATAAGTCAAAG +
Preference number: 4 (lower is better)
Translates to: GLWTWAWSFGLFVWNLHSPSMPR*RPNKSK
Trigger: CTTTGACTTATTTGGCCTTCATCTTGGCATGGAAGG...TGAGTGTAGATTCCAAACAAAGAGACCAAAGCTCCATGCCCAGGTCCAAAGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR GCA 90 bp GTCTTGCCAAGCACCCTTCTGGGGTCCTCTTCCTTTTCCAGAGCATTGTCTCTTTCTATGTACTCAAACTaGAGGTTGCTATCCACATGG +
Preference number: 4 (lower is better)
Translates to: VLPSTLLGSSSFSRALSLSMYSN*RLLSTW
Trigger: CCATGTGGATAGCAACCTGCAGTTTGAGTACATAGA...AAGAGACAATGCTCTGGAAAAGGAAGAGGACCCCAGAAGGGTGCTTGGCAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR GCA 90 bp TCTGCTTTCTTCCTTTGCTGGACCACTTTTCCTACAAAACTGGTACCCTGTGCCGAGATGCCAGGTAGATaGATTGAGTTAAGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: SAFFLCWTTFPTKLVPCAEMPGR*IELRAG
Trigger: ACCAGCCCTTAACTCAATGCATCTACCTGGCATCTC...GGCACAGGGTACCAGTTTTGTAGGAAAAGTGGTCCAGCAAAGGAAGAAAGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR GCA 90 bp TCTGCTTTCTTCCTTTGCTGGACCACTTTTCCTACAAAACTGGTACCCTGTGCCGCCAGGGGTCTTGACTaGTATTTCCTGTCCTCATTT +
Preference number: 4 (lower is better)
Translates to: SAFFLCWTTFPTKLVPCAARGLD*YFLSSF
Trigger: AAATGAGGACAGGAAATAGCAGTCAAGACCCCTGGC...GGCACAGGGTACCAGTTTTGTAGGAAAAGTGGTCCAGCAAAGGAAGAAAGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR GCA 90 bp AACCAGCTTCCTGAAGGATATAAATTCGCTGGAAGAAAGACCTTGGTTTTGTTCAGTTCCCCGTCGATCTaGTCCCACAGCCCTGTGTCT +
Preference number: 4 (lower is better)
Translates to: NQLPEGYKFAGRKTLVLFSSPSI*SHSPVS
Trigger: AGACACAGGGCTGTGGGAGCAGATCGACGGGGAACT...GAACAAAACCAAGGTCTTTCTTCCAGCGAATTTATATCCTTCAGGAAGCTGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp CCCACTGGCTTCTATGGGGCCTTTGGACCTGGGCATGGAGCTTTGGTCTCTTTGACGACCAAATCCACATaGAGTCCAAATTCATTAAAA +
Preference number: 4 (lower is better)
Translates to: PTGFYGAFGPGHGALVSLTTKST*SPNSLK
Trigger: TTTTAATGAATTTGGACTCCATGTGGATTTGGTCGT...CAAAGAGACCAAAGCTCCATGCCCAGGTCCAAAGGCCCCATAGAAGCCAGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp CATTGGTACTATCTAGGTACACATCTCCTCTCAAAAGATGAGAATATACAGGTGGAGCCTCCCAGGGGCTaGTTGATGTCCAGTCCACAG +
Preference number: 4 (lower is better)
Translates to: HWYYLGTHLLSKDENIQVEPPRG*LMSSPQ
Trigger: CTGTGGACTGGACATCAACCAGCCCCTGGGAGGCTC...CACCTGTATATTCTCATCTTTTGAGAGGAGATGTGTACCTAGATAGTACCAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp CAACCGGGATGCACCTGGAGATTTATCAGCCAGAAGCTTTCAAATGCTCCCTATCTTTGGACCTGGGCATaGAGCTTTGGTCTCTTTGTT +
Preference number: 4 (lower is better)
Translates to: QPGCTWRFISQKLSNAPYLWTWA*SFGLFV
Trigger: AACAAAGAGACCAAAGCTCCATGCCCAGGTCCAAAG...ATAGGGAGCATTTGAAAGCTTCTGGCTGATAAATCTCCAGGTGCATCCCGGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp GTTGGTCTGCTTTCTTCCTTTGCTGGACCACTTTTCCTACAAAACTGGTACCCTGGTCAGCAGGGCCTTTaGAAATTGGAACCACTTGGA +
Preference number: 4 (lower is better)
Translates to: VGLLSSFAGPLFLQNWYPGQQGL*KLEPLG
Trigger: TCCAAGTGGTTCCAATTTCCAAAGGCCCTGCTGACC...AGGGTACCAGTTTTGTAGGAAAAGTGGTCCAGCAAAGGAAGAAAGCAGACCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp CATTGGTACTATCTAGGTACACATCTCCTCTCAAAAGATGAGAATATACAGGTGCCCCCAGCCCTCTCCTaGGAATCACATGTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: HWYYLGTHLLSKDENIQVPPALS*ESHVVS
Trigger: GCTGACCACATGTGATTCCCAGGAGAGGGCTGGGGG...CACCTGTATATTCTCATCTTTTGAGAGGAGATGTGTACCTAGATAGTACCAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp CAACCGGGATGCACCTGGAGATTTATCAGCCAGAAGCTTTCAAATGCTCCCTATCTTTTCCTACAAAACTaGTACCCTGTGCCACTAGGG +
Preference number: 4 (lower is better)
Translates to: QPGCTWRFISQKLSNAPYLFLQN*YPVPLG
Trigger: CCCTAGTGGCACAGGGTACCAGTTTTGTAGGAAAAG...ATAGGGAGCATTTGAAAGCTTCTGGCTGATAAATCTCCAGGTGCATCCCGGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR TCA 90 bp AACCAGCTTCCTGAAGGATATAAATTCGCTGGAAGAAAGACCTTGGTTTTGTTCTGGTGCCCGTCTTGTTaGCACTGGACAGGTAGTGCT +
Preference number: 4 (lower is better)
Translates to: NQLPEGYKFAGRKTLVLFWCPSC*HWTGSA
Trigger: AGCACTACCTGTCCAGTGTCAACAAGACGGGCACCA...GAACAAAACCAAGGTCTTTCTTCCAGCGAATTTATATCCTTCAGGAAGCTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR TCA 90 bp TACTATCTAGGTACACATCTCCTCTCAAAAGATGAGAATATACAGGTGTGTGGTCAGGTAAGGGATTCCTaGGCGGTCCAGGTCACTGGT +
Preference number: 4 (lower is better)
Translates to: YYLGTHLLSKDENIQVCGQVRDS*AVQVTG
Trigger: ACCAGTGACCTGGACCGCTCAGGAATCCCTTACCTG...ACCACACACCTGTATATTCTCATCTTTTGAGAGGAGATGTGTACCTAGATAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR TCA 90 bp GAGAAGTCATCCACTTGTCCTTCACACTCACAAGTCCGTGAGAGGCAGAAAGAGCCTCACTATACTTGCTaGCATAGGAGTAGATCTCAT +
Preference number: 4 (lower is better)
Translates to: EKSSTCPSHSQVRERQKEPHYTC*HRSRSH
Trigger: ATGAGATCTACTCCTATGTCAGCAAGTATAGTGAGG...CTCTTTCTGCCTCTCACGGACTTGTGAGTGTGAAGGACAAGTGGATGACTTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR TCA 90 bp TCTGCTTTCTTCCTTTGCTGGACCACTTTTCCTACAAAACTGGTACCCTGTGCCATTCATGGGGATCACTaGGCTCCAGATACTAAAACG +
Preference number: 4 (lower is better)
Translates to: SAFFLCWTTFPTKLVPCAIHGDH*APDTKT
Trigger: CGTTTTAGTATCTGGAGCTCAGTGATCCCCATGAAT...GGCACAGGGTACCAGTTTTGTAGGAAAAGTGGTCCAGCAAAGGAAGAAAGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR GCA 90 bp AACCAGCTTCCTGAAGGATATAAATTCGCTGGAAGAAAGACCTTGGTTTTGTTCTGGTGGGGTCATGAGTaGAGAGGTTGCGGTACTTGC +
Preference number: 4 (lower is better)
Translates to: NQLPEGYKFAGRKTLVLFWWGHE*RGCGTC
Trigger: GCAAGTACCGCAACCTCTGCACTCATGACCCCACCA...GAACAAAACCAAGGTCTTTCTTCCAGCGAATTTATATCCTTCAGGAAGCTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR GCA 90 bp CAAGCACCCTTCTGGGGTCCTCTTCCTTTTCCAGAGCATTGTCTCTTGTGCAGATTGCGAAGTGTTTGGTaGATACTTGTGCTCATCATT +
Preference number: 4 (lower is better)
Translates to: QAPFWGPLPFPEHCLLCRLRSVW*ILVLII
Trigger: AATGATGAGCACAAGTATGCACCAAACACTTCGCAA...TCTGCACAAGAGACAATGCTCTGGAAAAGGAAGAGGACCCCAGAAGGGTGCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR GCA 90 bp TCTGCTTTCTTCCTTTGCTGGACCACTTTTCCTACAAAACTGGTACCCTGTGCCACTGGCCTCTGTTTTTaGGAAGTGTTTGGTGCATAC +
Preference number: 4 (lower is better)
Translates to: SAFFLCWTTFPTKLVPCATGLCF*EVFGAY
Trigger: GTATGCACCAAACACTTCGCAAAAACAGAGGCCAGT...GGCACAGGGTACCAGTTTTGTAGGAAAAGTGGTCCAGCAAAGGAAGAAAGCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR GCA 90 bp CAAGCACCCTTCTGGGGTCCTCTTCCTTTTCCAGAGCATTGTCTCTTGTGCAGAAGCTTCTGTAACCTATaGTCTTCAAGTATTGCTTGC +
Preference number: 4 (lower is better)
Translates to: QAPFWGPLPFPEHCLLCRSFCNL*SSSIAC
Trigger: GCAAGCAATACTTGAAGAGCATAGGTTACAGAAGCT...TCTGCACAAGAGACAATGCTCTGGAAAAGGAAGAGGACCCCAGAAGGGTGCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR GCA 90 bp AAGTTCCATACTCCTCTGGCTGCCGGGATAATTCCAGGTTTTACTGGCCTCTGTGAGCATTGTCTCTTGTaGAGATCAATGAAACGAAGC +
Preference number: 4 (lower is better)
Translates to: KFHTPLAAGIIPGFTGLCEHCLL*RSMKRS
Trigger: GCTTCGTTTCATTGATCTGCACAAGAGACAATGCTC...ACAGAGGCCAGTAAAACCTGGAATTATCCCGGCAGCCAGAGGAGTATGGAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp CATTGGTACTATCTAGGTACACATCTCCTCTCAAAAGATGAGAATATACAGGTGAATACACAGGCGTACTaGCCCGGAGGTGGTTCCCAC +
Preference number: 4 (lower is better)
Translates to: HWYYLGTHLLSKDENIQVNTQAY*PGGGSH
Trigger: GTGGGAACCACCTCCGGGCCAGTACGCCTGTGTATT...CACCTGTATATTCTCATCTTTTGAGAGGAGATGTGTACCTAGATAGTACCAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp GTTGGTCTGCTTTCTTCCTTTGCTGGACCACTTTTCCTACAAAACTGGTACCCTAAATCCAAACTCATCTaGGCGTTCCACAGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: VGLLSSFAGPLFLQNWYPKSKLI*AFHSVQ
Trigger: CTGGACACTGTGGAACGCCCAGATGAGTTTGGATTT...AGGGTACCAGTTTTGTAGGAAAAGTGGTCCAGCAAAGGAAGAAAGCAGACCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp TACTATCTAGGTACACATCTCCTCTCAAAAGATGAGAATATACAGGTGTGTGGTCGGTCACCCTCCTTCTaGTCACCGTGGTCATGGTTC +
Preference number: 4 (lower is better)
Translates to: YYLGTHLLSKDENIQVCGRSPSF*SPWSWF
Trigger: GAACCATGACCACGGTGACCAGAAGGAGGGTGACCG...ACCACACACCTGTATATTCTCATCTTTTGAGAGGAGATGTGTACCTAGATAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp GTTGGTCTGCTTTCTTCCTTTGCTGGACCACTTTTCCTACAAAACTGGTACCCTTTTCCCCAGGGTGCCTaGTTTATGACAGGGATTGAT +
Preference number: 4 (lower is better)
Translates to: VGLLSSFAGPLFLQNWYPFPQGA*FMTGID
Trigger: ATCAATCCCTGTCATAAACCAGGCACCCTGGGGAAA...AGGGTACCAGTTTTGTAGGAAAAGTGGTCCAGCAAAGGAAGAAAGCAGACCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp TCTGCTTTCTTCCTTTGCTGGACCACTTTTCCTACAAAACTGGTACCCTGTGCCAGGGCCTTTGGAAATTaGAACCACTTGGAGGTAAAG +
Preference number: 4 (lower is better)
Translates to: SAFFLCWTTFPTKLVPCARAFGN*NHLEVK
Trigger: CTTTACCTCCAAGTGGTTCCAATTTCCAAAGGCCCT...GGCACAGGGTACCAGTTTTGTAGGAAAAGTGGTCCAGCAAAGGAAGAAAGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp GTTGGTCTGCTTTCTTCCTTTGCTGGACCACTTTTCCTACAAAACTGGTACCCTCCTTTAACTTCTTGGTaGAGCAAAGCCTGGATGCCA +
Preference number: 4 (lower is better)
Translates to: VGLLSSFAGPLFLQNWYPPLTSW*SKAWMP
Trigger: TGGCATCCAGGCTTTGCTCCACCAAGAAGTTAAAGG...AGGGTACCAGTTTTGTAGGAAAAGTGGTCCAGCAAAGGAAGAAAGCAGACCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp GAGAAGTCATCCACTTGTCCTTCACACTCACAAGTCCGTGAGAGGCAGAAAGAGCTGGAAGAAAGACCTTaGTTTTGTTCCGTGCTGTTT +
Preference number: 4 (lower is better)
Translates to: EKSSTCPSHSQVRERQKELEERP*FCSVLF
Trigger: AAACAGCACGGAACAAAACCAAGGTCTTTCTTCCAG...CTCTTTCTGCCTCTCACGGACTTGTGAGTGTGAAGGACAAGTGGATGACTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR TCA 90 bp GTTGGTCTGCTTTCTTCCTTTGCTGGACCACTTTTCCTACAAAACTGGTACCCTTGGACTTTCAGGTCCTaGGGGTTGTCAATGATGAAA +
Preference number: 4 (lower is better)
Translates to: VGLLSSFAGPLFLQNWYPWTFRS*GLSMMK
Trigger: TTTCATCATTGACAACCCTCAGGACCTGAAAGTCCA...AGGGTACCAGTTTTGTAGGAAAAGTGGTCCAGCAAAGGAAGAAAGCAGACCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR TCA 90 bp AACCAGCTTCCTGAAGGATATAAATTCGCTGGAAGAAAGACCTTGGTTTTGTTCAGCTGGAACTGGCTATaGCGAAACTTGGCTGGCGTA +
Preference number: 4 (lower is better)
Translates to: NQLPEGYKFAGRKTLVLFSWNWL*RNLAGV
Trigger: TACGCCAGCCAAGTTTCGTCATAGCCAGTTCCAGCT...GAACAAAACCAAGGTCTTTCTTCCAGCGAATTTATATCCTTCAGGAAGCTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR TCA 90 bp AACCAGCTTCCTGAAGGATATAAATTCGCTGGAAGAAAGACCTTGGTTTTGTTCGCCAGGGTGAGCTCTTaGTGGCTTTGCAATTTGTGC +
Preference number: 4 (lower is better)
Translates to: NQLPEGYKFAGRKTLVLFARVSS*WLCNLC
Trigger: GCACAAATTGCAAAGCCATCAAGAGCTCACCCTGGC...GAACAAAACCAAGGTCTTTCTTCCAGCGAATTTATATCCTTCAGGAAGCTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR GCA 90 bp TACTATCTAGGTACACATCTCCTCTCAAAAGATGAGAATATACAGGTGTGTGGTTGCAGAGCCGCACGATaGGTGAGGTGTAGAAGAGGT +
Preference number: 4 (lower is better)
Translates to: YYLGTHLLSKDENIQVCGCRAAR*VRCRRG
Trigger: ACCTCTTCTACACCTCACGCATCGTGCGGCTCTGCA...ACCACACACCTGTATATTCTCATCTTTTGAGAGGAGATGTGTACCTAGATAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR GCA 90 bp AACCAGCTTCCTGAAGGATATAAATTCGCTGGAAGAAAGACCTTGGTTTTGTTCAGGCGCTCCTTGATCTaGAAGTTGATGGCCCGGATA +
Preference number: 4 (lower is better)
Translates to: NQLPEGYKFAGRKTLVLFRRSLI*KLMARI
Trigger: TATCCGGGCCATCAACTTGCAGATCAAGGAGCGCCT...GAACAAAACCAAGGTCTTTCTTCCAGCGAATTTATATCCTTCAGGAAGCTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR GCA 90 bp AACCAGCTTCCTGAAGGATATAAATTCGCTGGAAGAAAGACCTTGGTTTTGTTCGTTGGCATTTGTCCCTaGGGGAGCACATGTTGTGCA +
Preference number: 4 (lower is better)
Translates to: NQLPEGYKFAGRKTLVLFVGICP*GSTCCA
Trigger: TGCACAACATGTGCTCCCGCAGGGACAAATGCCAAC...GAACAAAACCAAGGTCTTTCTTCCAGCGAATTTATATCCTTCAGGAAGCTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR GCA 90 bp GAGAAGTCATCCACTTGTCCTTCACACTCACAAGTCCGTGAGAGGCAGAAAGAGTTTGGTGCATACTTGTaGTCATCATTCTTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: EKSSTCPSHSQVRERQKEFGAYL*SSFFFS
Trigger: GGAGAAGAAGAATGATGAGCACAAGTATGCACCAAA...CTCTTTCTGCCTCTCACGGACTTGTGAGTGTGAAGGACAAGTGGATGACTTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR GCA 90 bp CATTGGTACTATCTAGGTACACATCTCCTCTCAAAAGATGAGAATATACAGGTGGCCGTTTCCCCAGGGTaGCTGGTTTATGACAGGGAT +
Preference number: 4 (lower is better)
Translates to: HWYYLGTHLLSKDENIQVAVSPG*LVYDRD
Trigger: ATCCCTGTCATAAACCAGGCACCCTGGGGAAACGGC...CACCTGTATATTCTCATCTTTTGAGAGGAGATGTGTACCTAGATAGTACCAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR GCA 90 bp CAAGCACCCTTCTGGGGTCCTCTTCCTTTTCCAGAGCATTGTCTCTTGTGCAGATGTTTTCTTTTTAATTaGCAGGGACCACTGGATGAT +
Preference number: 4 (lower is better)
Translates to: QAPFWGPLPFPEHCLLCRCFLFN*QGPLDD
Trigger: ATCATCCAGTGGTCCCTGGCAATTAAAAAGAAAACA...TCTGCACAAGAGACAATGCTCTGGAAAAGGAAGAGGACCCCAGAAGGGTGCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR GCA 90 bp AACCAGCTTCCTGAAGGATATAAATTCGCTGGAAGAAAGACCTTGGTTTTGTTCAGAGACTTCCCTCTCTaGCTCCCCCAAGATGAATGG +
Preference number: 4 (lower is better)
Translates to: NQLPEGYKFAGRKTLVLFRDFPL*LPQDEW
Trigger: CCATTCATCTTGGGGGAGGCAGAGAGGGAAGTCTCT...GAACAAAACCAAGGTCTTTCTTCCAGCGAATTTATATCCTTCAGGAAGCTGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp TACTATCTAGGTACACATCTCCTCTCAAAAGATGAGAATATACAGGTGTGTGGTTCAAGATCTCCTCTGTaGGCACCAGCTGGGGACAGT +
Preference number: 4 (lower is better)
Translates to: YYLGTHLLSKDENIQVCGSRSPL*APAGDS
Trigger: ACTGTCCCCAGCTGGTGCCCACAGAGGAGATCTTGA...ACCACACACCTGTATATTCTCATCTTTTGAGAGGAGATGTGTACCTAGATAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp TCTGCTTTCTTCCTTTGCTGGACCACTTTTCCTACAAAACTGGTACCCTGTGCCGAATTAAACAAAAGTTaGACGGGATTAACAGGGCGG +
Preference number: 4 (lower is better)
Translates to: SAFFLCWTTFPTKLVPCAELNKS*TGLTGR
Trigger: CCGCCCTGTTAATCCCGTCCAACTTTTGTTTAATTC...GGCACAGGGTACCAGTTTTGTAGGAAAAGTGGTCCAGCAAAGGAAGAAAGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp TACTATCTAGGTACACATCTCCTCTCAAAAGATGAGAATATACAGGTGTGTGGTTGCTTGCAGAACAGTTaGAGCTGGCTGCTCGGATCC +
Preference number: 4 (lower is better)
Translates to: YYLGTHLLSKDENIQVCGCLQNS*SWLLGS
Trigger: GGATCCGAGCAGCCAGCTCCAACTGTTCTGCAAGCA...ACCACACACCTGTATATTCTCATCTTTTGAGAGGAGATGTGTACCTAGATAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp GTTGGTCTGCTTTCTTCCTTTGCTGGACCACTTTTCCTACAAAACTGGTACCCTCTCATCCAAAGGGTGTaGACTTCATTGGTTCTTGGT +
Preference number: 4 (lower is better)
Translates to: VGLLSSFAGPLFLQNWYPLIQRV*TSLVLG
Trigger: ACCAAGAACCAATGAAGTCCACACCCTTTGGATGAG...AGGGTACCAGTTTTGTAGGAAAAGTGGTCCAGCAAAGGAAGAAAGCAGACCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp GTTGGTCTGCTTTCTTCCTTTGCTGGACCACTTTTCCTACAAAACTGGTACCCTTTTATCCCTCATTCATaGGGATCACTGAGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: VGLLSSFAGPLFLQNWYPFIPHS*GSLSSR
Trigger: TCTGGAGCTCAGTGATCCCCATGAATGAGGGATAAA...AGGGTACCAGTTTTGTAGGAAAAGTGGTCCAGCAAAGGAAGAAAGCAGACCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR TCA 90 bp CATTGGTACTATCTAGGTACACATCTCCTCTCAAAAGATGAGAATATACAGGTGCCTCATGGCGTGGCTTaGGTCCAGCTTTTTCCCTTT +
Preference number: 4 (lower is better)
Translates to: HWYYLGTHLLSKDENIQVPHGVA*VQLFPF
Trigger: AAAGGGAAAAAGCTGGACTCAAGCCACGCCATGAGG...CACCTGTATATTCTCATCTTTTGAGAGGAGATGTGTACCTAGATAGTACCAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR GCA 90 bp TCTGCTTTCTTCCTTTGCTGGACCACTTTTCCTACAAAACTGGTACCCTGTGCCTGGCTTTGCAATTTGTaGAAAGTTCTGGAAGTTCCA +
Preference number: 4 (lower is better)
Translates to: SAFFLCWTTFPTKLVPCAWLCNL*KVLEVP
Trigger: TGGAACTTCCAGAACTTTGCACAAATTGCAAAGCCA...GGCACAGGGTACCAGTTTTGTAGGAAAAGTGGTCCAGCAAAGGAAGAAAGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR GCA 90 bp CAACCGGGATGCACCTGGAGATTTATCAGCCAGAAGCTTTCAAATGCTCCCTATGTGAGGACTTTGAAATaGAGAAGATGTTTCCTACCT +
Preference number: 4 (lower is better)
Translates to: QPGCTWRFISQKLSNAPYVRTLK*RRCFLP
Trigger: AGGTAGGAAACATCTTCTGCATTTCAAAGTCCTCAC...ATAGGGAGCATTTGAAAGCTTCTGGCTGATAAATCTCCAGGTGCATCCCGGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp AACCAGCTTCCTGAAGGATATAAATTCGCTGGAAGAAAGACCTTGGTTTTGTTCATACTGAGATGCTGCTaGGATGCACTGCAAGGCTCA +
Preference number: 4 (lower is better)
Translates to: NQLPEGYKFAGRKTLVLFILRCC*DALQGS
Trigger: TGAGCCTTGCAGTGCATCCCAGCAGCATCTCAGTAT...GAACAAAACCAAGGTCTTTCTTCCAGCGAATTTATATCCTTCAGGAAGCTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp AACCAGCTTCCTGAAGGATATAAATTCGCTGGAAGAAAGACCTTGGTTTTGTTCCTTCACTGGGATCTCTaGACTGTTCTCGTTGTCAGG +
Preference number: 4 (lower is better)
Translates to: NQLPEGYKFAGRKTLVLFLHWDL*TVLVVR
Trigger: CCTGACAACGAGAACAGTCCAGAGATCCCAGTGAAG...GAACAAAACCAAGGTCTTTCTTCCAGCGAATTTATATCCTTCAGGAAGCTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp CAAGCACCCTTCTGGGGTCCTCTTCCTTTTCCAGAGCATTGTCTCTTGTGCAGAAAAATATCCTCAAATTaGATAACAGGGAGAAGAGAG +
Preference number: 4 (lower is better)
Translates to: QAPFWGPLPFPEHCLLCRKISSN*ITGRRE
Trigger: CTCTCTTCTCCCTGTTATCCAATTTGAGGATATTTT...TCTGCACAAGAGACAATGCTCTGGAAAAGGAAGAGGACCCCAGAAGGGTGCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367033.4
3UTR CAA 72 bp TGCCGGGATAATTCCAGGTTTTACTGGCCTCTGTTTTaGCGAAGTGTTTGGTGCATACTTGTGCTCATCATT +
Preference number: 4 (lower is better)
Translates to: CRDNSRFYWPLF*RSVWCILVLII
Trigger: AATGATGAGCACAAGTATGCACCAAACACTTCGCAAAAACAGAGGCCAGTAAAACCTGGAATTATCCCGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR TCA 90 bp TACTATCTAGGTACACATCTCCTCTCAAAAGATGAGAATATACAGGTGTGTGGTACGAAGGTGTACTGCTaGTGGGACTTCGTCATGAAC +
Preference number: 4 (lower is better)
Translates to: YYLGTHLLSKDENIQVCGTKVYC*WDFVMN
Trigger: GTTCATGACGAAGTCCCATCAGCAGTACACCTTCGT...ACCACACACCTGTATATTCTCATCTTTTGAGAGGAGATGTGTACCTAGATAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR TCA 90 bp CATTGGTACTATCTAGGTACACATCTCCTCTCAAAAGATGAGAATATACAGGTGGGATCAAAATGGTTTTaGGAGCCCTGCTGTGGAGAG +
Preference number: 4 (lower is better)
Translates to: HWYYLGTHLLSKDENIQVGSKWF*EPCCGE
Trigger: CTCTCCACAGCAGGGCTCTCAAAACCATTTTGATCC...CACCTGTATATTCTCATCTTTTGAGAGGAGATGTGTACCTAGATAGTACCAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR GCA 90 bp CATTGGTACTATCTAGGTACACATCTCCTCTCAAAAGATGAGAATATACAGGTGTTGCTTTTCCAGGTGTaGCGCACATCTGTGTCATGG +
Preference number: 4 (lower is better)
Translates to: HWYYLGTHLLSKDENIQVLLFQV*RTSVSW
Trigger: CCATGACACAGATGTGCGGCACACCTGGAAAAGCAA...CACCTGTATATTCTCATCTTTTGAGAGGAGATGTGTACCTAGATAGTACCAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR GCA 90 bp AACCAGCTTCCTGAAGGATATAAATTCGCTGGAAGAAAGACCTTGGTTTTGTTCAGAGCTTGTCCCTTCTaGCCTTACACACGCAAGAAT +
Preference number: 4 (lower is better)
Translates to: NQLPEGYKFAGRKTLVLFRACPF*PYTRKN
Trigger: ATTCTTGCGTGTGTAAGGGCAGAAGGGACAAGCTCT...GAACAAAACCAAGGTCTTTCTTCCAGCGAATTTATATCCTTCAGGAAGCTGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR TCA 90 bp CATTGGTACTATCTAGGTACACATCTCCTCTCAAAAGATGAGAATATACAGGTGTTTTGCCCTTCAGAATaGTGGGCGATCCTGGCTTTT +
Preference number: 4 (lower is better)
Translates to: HWYYLGTHLLSKDENIQVFCPSE*WAILAF
Trigger: AAAAGCCAGGATCGCCCATCATTCTGAAGGGCAAAA...CACCTGTATATTCTCATCTTTTGAGAGGAGATGTGTACCTAGATAGTACCAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR GCA 90 bp AACCAGCTTCCTGAAGGATATAAATTCGCTGGAAGAAAGACCTTGGTTTTGTTCCCAGAAGCTTTCAAATaGTCCCTATTTGTTCTGCCC +
Preference number: 4 (lower is better)
Translates to: NQLPEGYKFAGRKTLVLFPEAFK*SLFVLP
Trigger: GGGCAGAACAAATAGGGAGCATTTGAAAGCTTCTGG...GAACAAAACCAAGGTCTTTCTTCCAGCGAATTTATATCCTTCAGGAAGCTGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp CATTGGTACTATCTAGGTACACATCTCCTCTCAAAAGATGAGAATATACAGGTGCAGAAGGTAGTAACGTaGGCATGCCACAGTCATTTC +
Preference number: 4 (lower is better)
Translates to: HWYYLGTHLLSKDENIQVQKVVT*ACHSHF
Trigger: GAAATGACTGTGGCATGCCCACGTTACTACCTTCTG...CACCTGTATATTCTCATCTTTTGAGAGGAGATGTGTACCTAGATAGTACCAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp GTTGGTCTGCTTTCTTCCTTTGCTGGACCACTTTTCCTACAAAACTGGTACCCTAGTAGCAAAAAGCATTaGTACTATCTAGGTACACAT +
Preference number: 4 (lower is better)
Translates to: VGLLSSFAGPLFLQNWYPSSKKH*YYLGTH
Trigger: ATGTGTACCTAGATAGTACCAATGCTTTTTGCTACT...AGGGTACCAGTTTTGTAGGAAAAGTGGTCCAGCAAAGGAAGAAAGCAGACCAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp CATTGGTACTATCTAGGTACACATCTCCTCTCAAAAGATGAGAATATACAGGTGATGAATGGCTTCTTGTaGAGAGGAGCTGTGGCTTTA +
Preference number: 4 (lower is better)
Translates to: HWYYLGTHLLSKDENIQVMNGFL*RGAVAL
Trigger: TAAAGCCACAGCTCCTCTCCACAAGAAGCCATTCAT...CACCTGTATATTCTCATCTTTTGAGAGGAGATGTGTACCTAGATAGTACCAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR TCA 90 bp TACTATCTAGGTACACATCTCCTCTCAAAAGATGAGAATATACAGGTGTGTGGTGCTACTAATAGGGCCTaGGAAACTTTAAAGAAGTGG +
Preference number: 4 (lower is better)
Translates to: YYLGTHLLSKDENIQVCGATNRA*ETLKKW
Trigger: CCACTTCTTTAAAGTTTCTCAGGCCCTATTAGTAGC...ACCACACACCTGTATATTCTCATCTTTTGAGAGGAGATGTGTACCTAGATAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp AACCAGCTTCCTGAAGGATATAAATTCGCTGGAAGAAAGACCTTGGTTTTGTTCTTTTTGCGAAGTGTTTaGTGCATACTTGTGCTCATC +
Preference number: 4 (lower is better)
Translates to: NQLPEGYKFAGRKTLVLFFLRSV*CILVLI
Trigger: GATGAGCACAAGTATGCACCAAACACTTCGCAAAAA...GAACAAAACCAAGGTCTTTCTTCCAGCGAATTTATATCCTTCAGGAAGCTGGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CCA 90 bp TACTATCTAGGTACACATCTCCTCTCAAAAGATGAGAATATACAGGTGTGTGGTCATCTCTGCTTTCTCTaGCATTTGGAAATAGGCATT +
Preference number: 4 (lower is better)
Translates to: YYLGTHLLSKDENIQVCGHLCFL*HLEIGI
Trigger: AATGCCTATTTCCAAATGCCAGAGAAAGCAGAGATG...ACCACACACCTGTATATTCTCATCTTTTGAGAGGAGATGTGTACCTAGATAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS GCA 90 bp AGGAGCCCCAGGCTCAGCCTCGGAGCAGGCACAAAGGGCGCCACCTaGGCTCCCCGCCCAGCCCGGCTGCCCAAGCTACTTCCCAGGGCT +
Preference number: 5 (lower is better)
Translates to: RSPRLSLGAGTKGAT*APRPARLPKLLPRA
Trigger: AGCCCTGGGAAGTAGCTTGGGCAGCCGGGCTGGGCGGGGAGCGCAGGTGGCGCCCTTTGTGCCTGCTCCGAGGCTGAGCCTGGGGCTCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483048.1
CDS GCA 90 bp TTGTGGCTGGACCAGTCGAGCCAGGGGCTGGAAGGGCTGGTACAGTaGTGGTGGAGGGTGCACCTGCGCTCGCCGCTGCACCAGCCACAC +
Preference number: 5 (lower is better)
Translates to: LWLDQSSQGLEGLVQ*WWRVHLRSPLHQPH
Trigger: GTGTGGCTGGTGCAGCGGCGAGCGCAGGTGCACCCTCCACCAGCACTGTACCAGCCCTTCCAGCCCCTGGCTCGACTGGTCCAGCCACAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS CCA 90 bp TGGCTGGACCAGTCGAGCCAGGGGCTGGAAGGGCTGGTACAGTGCTaGTGGAGGGTGCACCTGCGCTCGCCGCTGCACCAGCCACACTCA +
Preference number: 5 (lower is better)
Translates to: WLDQSSQGLEGLVQC*WRVHLRSPLHQPHS
Trigger: TGAGTGTGGCTGGTGCAGCGGCGAGCGCAGGTGCACCCTCCACCAGCACTGTACCAGCCCTTCCAGCCCCTGGCTCGACTGGTCCAGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS CCA 90 bp CTGGACCAGTCGAGCCAGGGGCTGGAAGGGCTGGTACAGTGCTGGTaGAGGGTGCACCTGCGCTCGCCGCTGCACCAGCCACACTCAAAC +
Preference number: 5 (lower is better)
Translates to: LDQSSQGLEGLVQCW*RVHLRSPLHQPHSN
Trigger: GTTTGAGTGTGGCTGGTGCAGCGGCGAGCGCAGGTGCACCCTCCACCAGCACTGTACCAGCCCTTCCAGCCCCTGGCTCGACTGGTCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS GCA 90 bp CTGAGAGGGGCGGCGGTGAGGAGACGGCTCCTGTGTGTGCTCATCTaGTCCACCTTCCCCGGTTGGCCCTCACATGATTCCAGCTCGGCG +
Preference number: 5 (lower is better)
Translates to: LRGAAVRRRLLCVLI*STFPGWPSHDSSSA
Trigger: CGCCGAGCTGGAATCATGTGAGGGCCAACCGGGGAAGGTGGAGCAGATGAGCACACACAGGAGCCGTCTCCTCACCGCCGCCCCTCTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CAA 90 bp GACAGCGATCCAAAGCTACACGCCAAGGATGGAAGCCAGACCTCTGCGCTCCCCGGCCCTCCACTGGAGTaGAGCCTCCCAGGGGCTGGT +
Preference number: 5 (lower is better)
Translates to: DSDPKLHAKDGSQTSALPGPPLE*SLPGAG
Trigger: ACCAGCCCCTGGGAGGCTCAACTCCAGTGGAGGGCC...GGGGAGCGCAGAGGTCTGGCTTCCATCCTTGGCGTGTAGCTTTGGATCGCTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS TCA 90 bp CCAGTCTTGATCCAGCGGGATGACAGGGACATCCTTGGGCCCAGGTaGGATGCAGATGACCTGGCTCCCGGACACCTGCCCCTCCACCTC +
Preference number: 5 (lower is better)
Translates to: PVLIQRDDRDILGPR*DADDLAPGHLPLHL
Trigger: GAGGTGGAGGGGCAGGTGTCCGGGAGCCAGGTCATCTGCATCTCACCTGGGCCCAAGGATGTCCCTGTCATCCCGCTGGATCAAGACTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS GCA 90 bp TCCTTGGGCCCAGGTGAGATGCAGATGACCTGGCTCCCGGACACCTaGCCCTCCACCTCTGTCAGGTTCCCAAAGGCACAGGCGATACCC +
Preference number: 5 (lower is better)
Translates to: SLGPGEMQMTWLPDT*PSTSVRFPKAQAIP
Trigger: GGGTATCGCCTGTGCCTTTGGGAACCTGACAGAGGTGGAGGGGCAGGTGTCCGGGAGCCAGGTCATCTGCATCTCACCTGGGCCCAAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS CCA 90 bp ACATGGTGGGCGATCTCGGAGAAGTCCAGACCCAGGTTCACGCCATaGATGGTCACTCGCGTCCCTCCTTCCGGCGGTCCAGACACCGTC +
Preference number: 5 (lower is better)
Translates to: TWWAISEKSRPRFTP*MVTRVPPSGGPDTV
Trigger: GACGGTGTCTGGACCGCCGGAAGGAGGGACGCGAGTGACCATCCATGGCGTGAACCTGGGTCTGGACTTCTCCGAGATCGCCCACCATGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS CCA 90 bp CGTTGTAAACGTAGGAGGCCACAGAGGTCATGCGGTCCCTGCTGGTaGTGTACAGGGTCAGGCCCTCCACTGGAGTTGAGCCTCCCAGGG +
Preference number: 5 (lower is better)
Translates to: RCKRRRPQRSCGPCW*CTGSGPPLELSLPG
Trigger: CCCTGGGAGGCTCAACTCCAGTGGAGGGCCTGACCCTGTACACCACCAGCAGGGACCGCATGACCTCTGTGGCCTCCTACGTTTACAACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367033.4
ENST00000460870.1
CDS CCA 90 bp GGTGGGCGATCTCGGAGAAGTCCAGACCCAGGTTCACGCCATGGATaGTCACTCGCGTCCCTCCTTCCGGCGGTCCAGACACCGTCAAAA +
Preference number: 5 (lower is better)
Translates to: GGRSRRSPDPGSRHG*SLASLLPAVQTPSK
Trigger: TTTTGACGGTGTCTGGACCGCCGGAAGGAGGGACGCGAGTGACCATCCATGGCGTGAACCTGGGTCTGGACTTCTCCGAGATCGCCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CAA 90 bp GACACTCACAGAGCGCCTTTCCTCTCGATGACTCCCACTGGCTTCTATGGGGCCGACGGCCCCCGTCCCTaGGTGGACGGTCAAGTGGTT +
Preference number: 5 (lower is better)
Translates to: DTHRAPFLSMTPTGFYGADGPRP*VDGQVV
Trigger: AACCACTTGACCGTCCACCAAGGGACGGGGGCCGTC...GGCCCCATAGAAGCCAGTGGGAGTCATCGAGAGGAAAGGCGCTCTGTGAGTGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CAA 90 bp GACACTCACAGAGCGCCTTTCCTCTCGATGACTCCCACTGGCTTCTATGGGGCCTTCTGCAGGGTGCCCTaGGTGGCCAGTAGCCGGGTC +
Preference number: 5 (lower is better)
Translates to: DTHRAPFLSMTPTGFYGAFCRVP*VASSRV
Trigger: GACCCGGCTACTGGCCACCAAGGGCACCCTGCAGAA...GGCCCCATAGAAGCCAGTGGGAGTCATCGAGAGGAAAGGCGCTCTGTGAGTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS CCA 90 bp AGCCGTTGTAAACGTAGGAGGCCACAGAGGTCATGCGGTCCCTGCTaGTGGTGTACAGGGTCAGGCCCTCCACTGGAGTTGAGCCTCCCA +
Preference number: 5 (lower is better)
Translates to: SRCKRRRPQRSCGPC*WCTGSGPPLELSLP
Trigger: TGGGAGGCTCAACTCCAGTGGAGGGCCTGACCCTGTACACCACCAGCAGGGACCGCATGACCTCTGTGGCCTCCTACGTTTACAACGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367033.4
ENST00000460870.1
CDS-3UTR CAA 90 bp GACACTCACAGAGCGCCTTTCCTCTCGATGACTCCCACTGGCTTCTATGGGGCCAGGTCTCCAGCGGAGTaGATGGCCACACCCTCAGGG +
Preference number: 5 (lower is better)
Translates to: DTHRAPFLSMTPTGFYGARSPAE*MATPSG
Trigger: CCCTGAGGGTGTGGCCATCAACTCCGCTGGAGACCT...GGCCCCATAGAAGCCAGTGGGAGTCATCGAGAGGAAAGGCGCTCTGTGAGTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS GCA 90 bp TGTAGCCGTTGTAAACGTAGGAGGCCACAGAGGTCATGCGGTCCCTaGTGGTGGTGTACAGGGTCAGGCCCTCCACTGGAGTTGAGCCTC +
Preference number: 5 (lower is better)
Translates to: CSRCKRRRPQRSCGP*WWCTGSGPPLELSL
Trigger: GAGGCTCAACTCCAGTGGAGGGCCTGACCCTGTACACCACCAGCAGGGACCGCATGACCTCTGTGGCCTCCTACGTTTACAACGGCTACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367033.4
ENST00000460870.1
CDS GCA 90 bp AAACCACGCTGTAGCCGTTGTAAACGTAGGAGGCCACAGAGGTCATaGGGTCCCTGCTGGTGGTGTACAGGGTCAGGCCCTCCACTGGAG +
Preference number: 5 (lower is better)
Translates to: KPRCSRCKRRRPQRS*GPCWWCTGSGPPLE
Trigger: CTCCAGTGGAGGGCCTGACCCTGTACACCACCAGCAGGGACCGCATGACCTCTGTGGCCTCCTACGTTTACAACGGCTACAGCGTGGTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367033.4
ENST00000460870.1
CDS CCA 90 bp CTGGCCGGACTGCGGCTGGGGCAGATTTCGCGCCTTAAGGGTGATTaGCTTTACCTCCCCGACTGGAATCAAGATCTCCTCTGTGGGCAC +
Preference number: 5 (lower is better)
Translates to: LAGLRLGQISRLKGD*LYLPDWNQDLLCGH
Trigger: GTGCCCACAGAGGAGATCTTGATTCCAGTCGGGGAGGTAAAGCCAATCACCCTTAAGGCGCGAAATCTGCCCCAGCCGCAGTCCGGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CAA 90 bp GAGGCAGAACTGTCCCCAGCTCGTGCCTCTCGGCTTGAAGAACCACCTTCTCCCGTGCCGATGAAGAGCTaGCCATCCTCACCCTCAGAG +
Preference number: 5 (lower is better)
Translates to: EAELSPARASRLEEPPSPVPMKS*PSSPSE
Trigger: CTCTGAGGGTGAGGATGGCAAGCTCTTCATCGGCAC...GGGAGAAGGTGGTTCTTCAAGCCGAGAGGCACGAGCTGGGGACAGTTCTGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CAA 90 bp GACAGCGATCCAAAGCTACACGCCAAGGATGGAAGCCAGACCTCTGCGCTCCCCTCCTGGCTGGTGATATaGAAGGCCTGGGCCAGTGAG +
Preference number: 5 (lower is better)
Translates to: DSDPKLHAKDGSQTSALPSWLVI*KAWASE
Trigger: CTCACTGGCCCAGGCCTTCAATATCACCAGCCAGGA...GGGGAGCGCAGAGGTCTGGCTTCCATCCTTGGCGTGTAGCTTTGGATCGCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CAA 90 bp CCCACTGGCTTCTATGGGGCCTTTGGACCTGGGCATGGAGCTTTGGTCTCTTTGTTCCCCAGCAGCCAGTaGAGCTCCAGGTTGCCCTCG +
Preference number: 5 (lower is better)
Translates to: PTGFYGAFGPGHGALVSLFPSSQ*SSRLPS
Trigger: CGAGGGCAACCTGGAGCTCAACTGGCTGCTGGGGAA...CAAAGAGACCAAAGCTCCATGCCCAGGTCCAAAGGCCCCATAGAAGCCAGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CAA 90 bp CCCACTGGCTTCTATGGGGCCTTTGGACCTGGGCATGGAGCTTTGGTCTCTTTGCTGCGGGAGCACATGTaGTGCAGGGCACACCAGCCA +
Preference number: 5 (lower is better)
Translates to: PTGFYGAFGPGHGALVSLLREHM*CRAHQP
Trigger: TGGCTGGTGTGCCCTGCACAACATGTGCTCCCGCAG...CAAAGAGACCAAAGCTCCATGCCCAGGTCCAAAGGCCCCATAGAAGCCAGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CAA 90 bp CCCACTGGCTTCTATGGGGCCTTTGGACCTGGGCATGGAGCTTTGGTCTCTTTGCTGCTGCCCGTTTCCTaGTACCTCCAGCTCCCGCAG +
Preference number: 5 (lower is better)
Translates to: PTGFYGAFGPGHGALVSLLLPVS*YLQLPQ
Trigger: CTGCGGGAGCTGGAGGTACAAGGAAACGGGCAGCAG...CAAAGAGACCAAAGCTCCATGCCCAGGTCCAAAGGCCCCATAGAAGCCAGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CAA 90 bp GAGGCAGAACTGTCCCCAGCTCGTGCCTCTCGGCTTGAAGAACCACCTTCTCCCCCCTCCAATTGGCCATaGCCCCATCATTCTCCACGC +
Preference number: 5 (lower is better)
Translates to: EAELSPARASRLEEPPSPPSNWP*PHHSPR
Trigger: GCGTGGAGAATGATGGGGCAATGGCCAATTGGAGGG...GGGAGAAGGTGGTTCTTCAAGCCGAGAGGCACGAGCTGGGGACAGTTCTGCCTC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS TCA 90 bp CCCGGCTGTCTTCAGATTTTTCCAGCGCGACTTTCCGGGCTCCTCTaGCATCAGCAATCCCGGCGCTTCCTTCCCTTCTTGCTCTCCGGT +
Preference number: 5 (lower is better)
Translates to: PGCLQIFPARLSGLL*HQQSRRFLPFLLSG
Trigger: ACCGGAGAGCAAGAAGGGAAGGAAGCGCCGGGATTGCTGATGTCAGAGGAGCCCGGAAAGTCGCGCTGGAAAAATCTGAAGACAGCCGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367033.4
ENST00000486969.1
CDS GCA 90 bp TGGTCAGGGGTGTGTGGCCACTGGCAATGCTCCACTCTGGCTCGATaGGCTGGACCCGAGGGTCATCTATGTACTCAAACTGCAGGTTGC +
Preference number: 5 (lower is better)
Translates to: WSGVCGHWQCSTLAR*AGPEGHLCTQTAGC
Trigger: GCAACCTGCAGTTTGAGTACATAGATGACCCTCGGGTCCAGCGCATCGAGCCAGAGTGGAGCATTGCCAGTGGCCACACACCCCTGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS CCA 90 bp ACTCTGGCTTACACTCGCCAATACACAGGCGTACTGGCCCGGAGGTaGTTCCCACGAGGGCATGGCCCATCTCACAGACAATCTGCTCAG +
Preference number: 5 (lower is better)
Translates to: TLAYTRQYTGVLARR*FPRGHGPSHRQSAQ
Trigger: CTGAGCAGATTGTCTGTGAGATGGGCCATGCCCTCGTGGGAACCACCTCCGGGCCAGTACGCCTGTGTATTGGCGAGTGTAAGCCAGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS CCA 90 bp CTTCGTCATGAACTCTGGCTTACACTCGCCAATACACAGGCGTACTaGCCCGGAGGTGGTTCCCACGAGGGCATGGCCCATCTCACAGAC +
Preference number: 5 (lower is better)
Translates to: LRHELWLTLANTQAY*PGGGSHEGMAHLTD
Trigger: GTCTGTGAGATGGGCCATGCCCTCGTGGGAACCACCTCCGGGCCAGTACGCCTGTGTATTGGCGAGTGTAAGCCAGAGTTCATGACGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS CCA 90 bp GGGCTCGGTCGACACTCACAGAAACAGGGACCGGGCCAAGGCCATTaGATGATGGGGGTGAGACACACACGATCTCACTCATTGACCTCC +
Preference number: 5 (lower is better)
Translates to: GLGRHSQKQGPGQGH*MMGVRHTRSHSLTS
Trigger: GGAGGTCAATGAGTGAGATCGTGTGTGTCTCACCCCCATCATCCAATGGCCTTGGCCCGGTCCCTGTTTCTGTGAGTGTCGACCGAGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CAA 90 bp GAGGCAGAACTGTCCCCAGCTCGTGCCTCTCGGCTTGAAGAACCACCTTCTCCCCCGGTGGATGGCTCCTaGTATGTTGAGGACACACTC +
Preference number: 5 (lower is better)
Translates to: EAELSPARASRLEEPPSPPVDGS*YVEDTL
Trigger: GAGTGTGTCCTCAACATACAAGGAGCCATCCACCGG...GGGAGAAGGTGGTTCTTCAAGCCGAGAGGCACGAGCTGGGGACAGTTCTGCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CAA 90 bp GACAGCGATCCAAAGCTACACGCCAAGGATGGAAGCCAGACCTCTGCGCTCCCCTTCAGGATCAGGGTCTaGTACTCGATCTGCTGCCGG +
Preference number: 5 (lower is better)
Translates to: DSDPKLHAKDGSQTSALPFRIRV*YSICCR
Trigger: CCGGCAGCAGATCGAGTACAAGACCCTGATCCTGAA...GGGGAGCGCAGAGGTCTGGCTTCCATCCTTGGCGTGTAGCTTTGGATCGCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CAA 90 bp TCCACGCTCTCCACAAACCTTCAAGGAAACGCCCCAGGGGCAGTGAATCGTCTCAGGGCACTCAGCATGTaGAACTCCACGGCGTGCAGG +
Preference number: 5 (lower is better)
Translates to: STLSTNLQGNAPGAVNRLRALSM*NSTACR
Trigger: CCTGCACGCCGTGGAGTTCAACATGCTGAGTGCCCT...GAGACGATTCACTGCCCCTGGGGCGTTTCCTTGAAGGTTTGTGGAGAGCGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CAA 90 bp GAGGCAGAACTGTCCCCAGCTCGTGCCTCTCGGCTTGAAGAACCACCTTCTCCCCCCTCATGGCGTGGCTaGAGTCCAGCTTTTTCCCTT +
Preference number: 5 (lower is better)
Translates to: EAELSPARASRLEEPPSPPSWRG*SPAFSL
Trigger: AAGGGAAAAAGCTGGACTCAAGCCACGCCATGAGGG...GGGAGAAGGTGGTTCTTCAAGCCGAGAGGCACGAGCTGGGGACAGTTCTGCCTC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS TCA 90 bp GCCCGGATAGGGAAGGCACACAGGGCAGAGTCATCGGGCGGGTGGTaGTACTGCTTCTGCCCTTTGGAGAAGATGGCAAAGAGTACATCG +
Preference number: 5 (lower is better)
Translates to: ARIGKAHRAESSGGW*YCFCPLEKMAKSTS
Trigger: CGATGTACTCTTTGCCATCTTCTCCAAAGGGCAGAAGCAGTATCACCACCCGCCCGATGACTCTGCCCTGTGTGCCTTCCCTATCCGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367033.4
ENST00000460870.1
CDS CCA 90 bp CACTGGCTGATGCTGGCAGCAAATCGATTAGGTTCCCAGGCCTGTTaGCATTTGTCCCTGCGGGAGCACATGTTGTGCAGGGCACACCAG +
Preference number: 5 (lower is better)
Translates to: HWLMLAANRLGSQAC*HLSLREHMLCRAHQ
Trigger: CTGGTGTGCCCTGCACAACATGTGCTCCCGCAGGGACAAATGCCAACAGGCCTGGGAACCTAATCGATTTGCTGCCAGCATCAGCCAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS CCA 90 bp GGGCAGATTTCGCGCCTTAAGGGTGATTGGCTTTACCTCCCCGACTaGAATCAAGATCTCCTCTGTGGGCACCAGCTGGGGACAGTCCTC +
Preference number: 5 (lower is better)
Translates to: GQISRLKGDWLYLPD*NQDLLCGHQLGTVL
Trigger: GAGGACTGTCCCCAGCTGGTGCCCACAGAGGAGATCTTGATTCCAGTCGGGGAGGTAAAGCCAATCACCCTTAAGGCGCGAAATCTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS CCA 90 bp AGGGGTGTGTGGCCACTGGCAATGCTCCACTCTGGCTCGATGCGCTaGACCCGAGGGTCATCTATGTACTCAAACTGCAGGTTGCTATCC +
Preference number: 5 (lower is better)
Translates to: RGVWPLAMLHSGSMR*TRGSSMYSNCRLLS
Trigger: GGATAGCAACCTGCAGTTTGAGTACATAGATGACCCTCGGGTCCAGCGCATCGAGCCAGAGTGGAGCATTGCCAGTGGCCACACACCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CAA 90 bp GAGAAGTCATCCACTTGTCCTTCACACTCACAAGTCCGTGAGAGGCAGAAAGAGCCGGGCGATCCGGCCTaGGCGCCACTCCAAGTCCAT +
Preference number: 5 (lower is better)
Translates to: EKSSTCPSHSQVRERQKEPGDPA*APLQVH
Trigger: ATGGACTTGGAGTGGCGCCAAGGCCGGATCGCCCGG...CTCTTTCTGCCTCTCACGGACTTGTGAGTGTGAAGGACAAGTGGATGACTTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS TCA 90 bp CCCTCACTTTCCTCTAGCCTGGGAGAAGCTGCTGCAGCTGAGAGCTaGCTCATCTCTTCTACCCTCCCCTTCTTCTGGCAGCCTTGGGTA +
Preference number: 5 (lower is better)
Translates to: PSLSSSLGEAAAAES*LISSTLPFFWQPWV
Trigger: TACCCAAGGCTGCCAGAAGAAGGGGAGGGTAGAAGAGATGAGTCAGCTCTCAGCTGCAGCAGCTTCTCCCAGGCTAGAGGAAAGTGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483048.1
CDS GCA 90 bp CGATGCGCTGGACCCGAGGGTCATCTATGTACTCAAACTGCAGGTTaGTATCCACATGGGCTCGGTCGACACTCACAGAAACAGGGACCG +
Preference number: 5 (lower is better)
Translates to: RCAGPEGHLCTQTAG*YPHGLGRHSQKQGP
Trigger: CGGTCCCTGTTTCTGTGAGTGTCGACCGAGCCCATGTGGATAGCAACCTGCAGTTTGAGTACATAGATGACCCTCGGGTCCAGCGCATCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CAA 90 bp GAGAAGTCATCCACTTGTCCTTCACACTCACAAGTCCGTGAGAGGCAGAAAGAGTGCTGCCCGGTGAGGTaGGGAGGCTCGCAGAGAAGC +
Preference number: 5 (lower is better)
Translates to: EKSSTCPSHSQVRERQKECCPVR*GGSQRS
Trigger: GCTTCTCTGCGAGCCTCCCAACCTCACCGGGCAGCA...CTCTTTCTGCCTCTCACGGACTTGTGAGTGTGAAGGACAAGTGGATGACTTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CAA 90 bp GCTCCCTATTTGTTCTGCCCAGGCCATTCTTCGTCCAGCACTCATCCATTGCTTCGCAGAGGGAGGCAGTaGCTTTTCCAGGTGTGCCGC +
Preference number: 5 (lower is better)
Translates to: APYLFCPGHSSSSTHPLLRRGRQ*LFQVCR
Trigger: GCGGCACACCTGGAAAAGCAACTGCCTCCCTCTGCG...AAGCAATGGATGAGTGCTGGACGAAGAATGGCCTGGGCAGAACAAATAGGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CAA 90 bp GCAGCCAGAAGAGATGGTGGCAGTAGAAACAAGAGCAGCTCTCATCGCTGGGGGGTGAGGAAGGGCAGCTaGTTCCTCTTTGTCTTCCCC +
Preference number: 5 (lower is better)
Translates to: AARRDGGSRNKSSSHRWGVRKGS*FLFVFP
Trigger: GGGGAAGACAAAGAGGAACAAGCTGCCCTTCCTCAC...CCCCCAGCGATGAGAGCTGCTCTTGTTTCTACTGCCACCATCTCTTCTGGCTGC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CAA 90 bp GCAGCCAGAAGAGATGGTGGCAGTAGAAACAAGAGCAGCTCTCATCGCTGGGGGCCCAGGCTACTTCCTTaGTCAGCCCAAGTTCCCCAA +
Preference number: 5 (lower is better)
Translates to: AARRDGGSRNKSSSHRWGPRLLP*SAQVPQ
Trigger: TTGGGGAACTTGGGCTGACAAAGGAAGTAGCCTGGG...CCCCCAGCGATGAGAGCTGCTCTTGTTTCTACTGCCACCATCTCTTCTGGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CAA 90 bp CCCACTGGCTTCTATGGGGCCTTTGGACCTGGGCATGGAGCTTTGGTCTCTTTGCTGTTGCCTGCTAAGTaGGTGGCAGGAACCAGCTTC +
Preference number: 5 (lower is better)
Translates to: PTGFYGAFGPGHGALVSLLLPAK*VAGTSF
Trigger: GAAGCTGGTTCCTGCCACCAACTTAGCAGGCAACAG...CAAAGAGACCAAAGCTCCATGCCCAGGTCCAAAGGCCCCATAGAAGCCAGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS TCA 90 bp TTCATTAAAATCCACGTCAAGCCACCAGACACTTATCTGTATTCCTaGAGTCGCTCCTCGGTCTCCGCTCCGCGCGCCCCTCAGTCCTCC +
Preference number: 5 (lower is better)
Translates to: FIKIHVKPPDTYLYS*SRSSVSAPRAPQSS
Trigger: GGAGGACTGAGGGGCGCGCGGAGCGGAGACCGAGGAGCGACTTCAGGAATACAGATAAGTGTCTGGTGGCTTGACGTGGATTTTAATGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367033.4
ENST00000486969.1
CDS TCA 90 bp GCACAGAAGGGTTCACGAAGGTGTACTGCTGATGGGACTTCGTCATaGACTCTGGCTTACACTCGCCAATACACAGGCGTACTGGCCCGG +
Preference number: 5 (lower is better)
Translates to: AQKGSRRCTADGTSS*TLAYTRQYTGVLAR
Trigger: CCGGGCCAGTACGCCTGTGTATTGGCGAGTGTAAGCCAGAGTTCATGACGAAGTCCCATCAGCAGTACACCTTCGTGAACCCTTCTGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS GCA 90 bp AGGCTAAGCAACCGGCTGTGCTCAGATACTGAGATGCTGCTGGGATaGACTGCAAGGCTCACACACTGGCTGATGCTGGCAGCAAATCGA +
Preference number: 5 (lower is better)
Translates to: RLSNRLCSDTEMLLG*TARLTHWLMLAANR
Trigger: TCGATTTGCTGCCAGCATCAGCCAGTGTGTGAGCCTTGCAGTGCATCCCAGCAGCATCTCAGTATCTGAGCACAGCCGGTTGCTTAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS CCA 90 bp AGGGTTCACGAAGGTGTACTGCTGATGGGACTTCGTCATGAACTCTaGCTTACACTCGCCAATACACAGGCGTACTGGCCCGGAGGTGGT +
Preference number: 5 (lower is better)
Translates to: RVHEGVLLMGLRHEL*LTLANTQAYWPGGG
Trigger: ACCACCTCCGGGCCAGTACGCCTGTGTATTGGCGAGTGTAAGCCAGAGTTCATGACGAAGTCCCATCAGCAGTACACCTTCGTGAACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CAA 90 bp GTCTTGCCAAGCACCCTTCTGGGGTCCTCTTCCTTTTCCAGAGCATTGTCTCTTAGGTTCCCAGGCCTGTaGGCATTTGTCCCTGCGGGA +
Preference number: 5 (lower is better)
Translates to: VLPSTLLGSSSFSRALSLRFPGL*AFVPAG
Trigger: TCCCGCAGGGACAAATGCCAACAGGCCTGGGAACCT...AAGAGACAATGCTCTGGAAAAGGAAGAGGACCCCAGAAGGGTGCTTGGCAAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CAA 90 bp CCCACTGGCTTCTATGGGGCCTTTGGACCTGGGCATGGAGCTTTGGTCTCTTTGTACTCAAACTGCAGGTaGCTATCCACATGGGCTCGG +
Preference number: 5 (lower is better)
Translates to: PTGFYGAFGPGHGALVSLYSNCR*LSTWAR
Trigger: CCGAGCCCATGTGGATAGCAACCTGCAGTTTGAGTA...CAAAGAGACCAAAGCTCCATGCCCAGGTCCAAAGGCCCCATAGAAGCCAGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CAA 90 bp GACACTCACAGAGCGCCTTTCCTCTCGATGACTCCCACTGGCTTCTATGGGGCCCCTGGGCATGGAGCTTaGGTCTCTTTGTTTGGAATC +
Preference number: 5 (lower is better)
Translates to: DTHRAPFLSMTPTGFYGAPGHGA*VSLFGI
Trigger: GATTCCAAACAAAGAGACCAAAGCTCCATGCCCAGG...GGCCCCATAGAAGCCAGTGGGAGTCATCGAGAGGAAAGGCGCTCTGTGAGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CAA 90 bp CCTCTGTCTTGCCAAGCACCCTTCTGGGGTCCTCTTCCTTTTCCAGAGCATTGTGCTTCTATGGGGCCTTaGGACCTGGGCATGGAGCTT +
Preference number: 5 (lower is better)
Translates to: PLSCQAPFWGPLPFPEHCASMGP*DLGMEL
Trigger: AAGCTCCATGCCCAGGTCCAAAGGCCCCATAGAAGC...ACAATGCTCTGGAAAAGGAAGAGGACCCCAGAAGGGTGCTTGGCAAGACAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CAA 90 bp TTCTTCGTCCAGCACTCATCCATTGCTTCTGTTTCACGCTCAGCAGGGCCAGGGCTCTCCACCCTCCAATaGGCCATTGCCCCATCATTC +
Preference number: 5 (lower is better)
Translates to: FFVQHSSIASVSRSAGPGLSTLQ*AIAPSF
Trigger: GAATGATGGGGCAATGGCCAATTGGAGGGTGGAGAG...CCCTGGCCCTGCTGAGCGTGAAACAGAAGCAATGGATGAGTGCTGGACGAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CAA 90 bp GCAGCCAGAAGAGATGGTGGCAGTAGAAACAAGAGCAGCTCTCATCGCTGGGGGTCTCCAGTTTGCTTATaGGGTGGAGGCCCTGTATGC +
Preference number: 5 (lower is better)
Translates to: AARRDGGSRNKSSSHRWGSPVCL*GGGPVC
Trigger: GCATACAGGGCCTCCACCCAATAAGCAAACTGGAGA...CCCCCAGCGATGAGAGCTGCTCTTGTTTCTACTGCCACCATCTCTTCTGGCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CAA 90 bp GCAGCCAGAAGAGATGGTGGCAGTAGAAACAAGAGCAGCTCTCATCGCTGGGGGCATGGGATAGAGAGCTaGTCCCTTCTGCCCTTACAC +
Preference number: 5 (lower is better)
Translates to: AARRDGGSRNKSSSHRWGHGIES*SLLPLH
Trigger: GTGTAAGGGCAGAAGGGACAAGCTCTCTATCCCATG...CCCCCAGCGATGAGAGCTGCTCTTGTTTCTACTGCCACCATCTCTTCTGGCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS GCA 90 bp TCTGGCTCGATGCGCTGGACCCGAGGGTCATCTATGTACTCAAACTaGAGGTTGCTATCCACATGGGCTCGGTCGACACTCACAGAAACA +
Preference number: 5 (lower is better)
Translates to: SGSMRWTRGSSMYSN*RLLSTWARSTLTET
Trigger: TGTTTCTGTGAGTGTCGACCGAGCCCATGTGGATAGCAACCTGCAGTTTGAGTACATAGATGACCCTCGGGTCCAGCGCATCGAGCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS GCA 90 bp GGATTCCCCATCTCAGGAAGTGCCTTAGAACTGCCCCACTCAGAATaGCCCACGATGTCTGGCTGTGAAGCTCTGCTGCAGGCTTCAAAT +
Preference number: 5 (lower is better)
Translates to: GFPISGSALELPHSE*PTMSGCEALLQASN
Trigger: ATTTGAAGCCTGCAGCAGAGCTTCACAGCCAGACATCGTGGGGCATTCTGAGTGGGGCAGTTCTAAGGCACTTCCTGAGATGGGGAATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480053.1
CDS CCA 90 bp TACTGCTTCTGCCCTTTGGAGAAGATGGCAAAGAGTACATCGTCCTaGCTGGTGATATTGAAGGCCTGGGCCAGTGAGTCCCCAGGCTTG +
Preference number: 5 (lower is better)
Translates to: YCFCPLEKMAKSTSS*LVILKAWASESPGL
Trigger: CAAGCCTGGGGACTCACTGGCCCAGGCCTTCAATATCACCAGCCAGGACGATGTACTCTTTGCCATCTTCTCCAAAGGGCAGAAGCAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367033.4
ENST00000460870.1
CDS CCA 90 bp TCAGATACTGAGATGCTGCTGGGATGCACTGCAAGGCTCACACACTaGCTGATGCTGGCAGCAAATCGATTAGGTTCCCAGGCCTGTTGG +
Preference number: 5 (lower is better)
Translates to: SDTEMLLGCTARLTH*LMLAANRLGSQACW
Trigger: CCAACAGGCCTGGGAACCTAATCGATTTGCTGCCAGCATCAGCCAGTGTGTGAGCCTTGCAGTGCATCCCAGCAGCATCTCAGTATCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CAA 90 bp AAGTTCCATACTCCTCTGGCTGCCGGGATAATTCCAGGTTTTACTGGCCTCTGTGATCTATTTCGAGGTTaGCTCCGCTGGCTGCGGCGC +
Preference number: 5 (lower is better)
Translates to: KFHTPLAAGIIPGFTGLCDLFRG*LRWLRR
Trigger: GCGCCGCAGCCAGCGGAGCAAACCTCGAAATAGATC...ACAGAGGCCAGTAAAACCTGGAATTATCCCGGCAGCCAGAGGAGTATGGAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CAA 90 bp CAACCGGGATGCACCTGGAGATTTATCAGCCAGAAGCTTTCAAATGCTCCCTATATGGGGACAGGCGCCTaGGTGCACTGGACGTCCTTC +
Preference number: 5 (lower is better)
Translates to: QPGCTWRFISQKLSNAPYMGTGA*VHWTSF
Trigger: GAAGGACGTCCAGTGCACCAAGGCGCCTGTCCCCAT...ATAGGGAGCATTTGAAAGCTTCTGGCTGATAAATCTCCAGGTGCATCCCGGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CAA 90 bp GAGAAGTCATCCACTTGTCCTTCACACTCACAAGTCCGTGAGAGGCAGAAAGAGCAGGCCTGTTGGCATTaGTCCCTGCGGGAGCACATG +
Preference number: 5 (lower is better)
Translates to: EKSSTCPSHSQVRERQKEQACWH*SLREHM
Trigger: CATGTGCTCCCGCAGGGACAAATGCCAACAGGCCTG...CTCTTTCTGCCTCTCACGGACTTGTGAGTGTGAAGGACAAGTGGATGACTTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CAA 90 bp GAGAAGTCATCCACTTGTCCTTCACACTCACAAGTCCGTGAGAGGCAGAAAGAGACCGGGCCAAGGCCATaGGATGATGGGGGTGAGACA +
Preference number: 5 (lower is better)
Translates to: EKSSTCPSHSQVRERQKETGPRP*DDGGET
Trigger: TGTCTCACCCCCATCATCCAATGGCCTTGGCCCGGT...CTCTTTCTGCCTCTCACGGACTTGTGAGTGTGAAGGACAAGTGGATGACTTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CAA 90 bp GCTCCCTATTTGTTCTGCCCAGGCCATTCTTCGTCCAGCACTCATCCATTGCTTTCCCAGTGTGACAGCTaGGACAGGTCCCTCTTCCCA +
Preference number: 5 (lower is better)
Translates to: APYLFCPGHSSSSTHPLLSQCDS*DRSLFP
Trigger: TGGGAAGAGGGACCTGTCCAAGCTGTCACACTGGGA...AAGCAATGGATGAGTGCTGGACGAAGAATGGCCTGGGCAGAACAAATAGGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CAA 90 bp GACACTCACAGAGCGCCTTTCCTCTCGATGACTCCCACTGGCTTCTATGGGGCCCTTTTCTCTTCCCATTaGTCAGCCGCATTCAGGCAA +
Preference number: 5 (lower is better)
Translates to: DTHRAPFLSMTPTGFYGALFSSH*SAAFRQ
Trigger: TTGCCTGAATGCGGCTGACAAATGGGAAGAGAAAAG...GGCCCCATAGAAGCCAGTGGGAGTCATCGAGAGGAAAGGCGCTCTGTGAGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CAA 90 bp GTCTTGCCAAGCACCCTTCTGGGGTCCTCTTCCTTTTCCAGAGCATTGTCTCTTGCAGGGCCAGGGGTCTaGACTGCTATTTCCTGTCCT +
Preference number: 5 (lower is better)
Translates to: VLPSTLLGSSSFSRALSLAGPGV*TAISCP
Trigger: AGGACAGGAAATAGCAGTCAAGACCCCTGGCCCTGC...AAGAGACAATGCTCTGGAAAAGGAAGAGGACCCCAGAAGGGTGCTTGGCAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS CCA 90 bp TCTCTTCCAGCTGCCTTCTGGGCTTTAACTCTTTTGACTCCTCTGTaGAACCGGTCCTGTCACAGGCTTGTCCTCCAGCCTGAGATGATG +
Preference number: 5 (lower is better)
Translates to: SLPAAFWALTLLTPL*NRSCHRLVLQPEMM
Trigger: CATCATCTCAGGCTGGAGGACAAGCCTGTGACAGGACCGGTTCCACAGAGGAGTCAAAAGAGTTAAAGCCCAGAAGGCAGCTGGAAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483048.1
CDS-3UTR CAA 90 bp GCTCCCTATTTGTTCTGCCCAGGCCATTCTTCGTCCAGCACTCATCCATTGCTTCGCTTCCTTCCCTTCTaGCTCTCCGGTTCGTTCACA +
Preference number: 5 (lower is better)
Translates to: APYLFCPGHSSSSTHPLLRFLPF*LSGSFT
Trigger: TGTGAACGAACCGGAGAGCAAGAAGGGAAGGAAGCG...AAGCAATGGATGAGTGCTGGACGAAGAATGGCCTGGGCAGAACAAATAGGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CAA 90 bp GAGAAGTCATCCACTTGTCCTTCACACTCACAAGTCCGTGAGAGGCAGAAAGAGATGGGGCTTCCGTCCTaGAGCACAGAGACCATCTCG +
Preference number: 5 (lower is better)
Translates to: EKSSTCPSHSQVRERQKEMGLPS*STETIS
Trigger: CGAGATGGTCTCTGTGCTCAAGGACGGAAGCCCCAT...CTCTTTCTGCCTCTCACGGACTTGTGAGTGTGAAGGACAAGTGGATGACTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CAA 90 bp GAGAAGTCATCCACTTGTCCTTCACACTCACAAGTCCGTGAGAGGCAGAAAGAGCAGCCCAAACCAGTCTaGATCCAGCGGGATGACAGG +
Preference number: 5 (lower is better)
Translates to: EKSSTCPSHSQVRERQKEQPKPV*IQRDDR
Trigger: CCTGTCATCCCGCTGGATCAAGACTGGTTTGGGCTG...CTCTTTCTGCCTCTCACGGACTTGTGAGTGTGAAGGACAAGTGGATGACTTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CAA 90 bp GGCCTTTGGACCTGGGCATGGAGCTTTGGTCTCTTTGTTTGGAATCTACACTCACAGAGGTTGCGGTACTaGCACCAATGGCAGCGGAAG +
Preference number: 5 (lower is better)
Translates to: GLWTWAWSFGLFVWNLHSQRLRY*HQWQRK
Trigger: CTTCCGCTGCCATTGGTGCAAGTACCGCAACCTCTG...TGAGTGTAGATTCCAAACAAAGAGACCAAAGCTCCATGCCCAGGTCCAAAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CAA 90 bp GCTCCCTATTTGTTCTGCCCAGGCCATTCTTCGTCCAGCACTCATCCATTGCTTGGGCGATCCTGGCTTTaGATCCAAGACTCCAGTAGG +
Preference number: 5 (lower is better)
Translates to: APYLFCPGHSSSSTHPLLGRSWL*IQDSSR
Trigger: CCTACTGGAGTCTTGGATCAAAAGCCAGGATCGCCC...AAGCAATGGATGAGTGCTGGACGAAGAATGGCCTGGGCAGAACAAATAGGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CAA 90 bp CCTCTGTCTTGCCAAGCACCCTTCTGGGGTCCTCTTCCTTTTCCAGAGCATTGTTCTGGACTGTTCTCGTaGTCAGGGTTGACGCAGTTC +
Preference number: 5 (lower is better)
Translates to: PLSCQAPFWGPLPFPEHCSGLFS*SGLTQF
Trigger: GAACTGCGTCAACCCTGACAACGAGAACAGTCCAGA...ACAATGCTCTGGAAAAGGAAGAGGACCCCAGAAGGGTGCTTGGCAAGACAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CAA 90 bp CAAGCACCCTTCTGGGGTCCTCTTCCTTTTCCAGAGCATTGTCTCTTGTGCAGACACCTTTGCTTCCACTaGTCCTCCTACCCCCTGACT +
Preference number: 5 (lower is better)
Translates to: QAPFWGPLPFPEHCLLCRHLCFH*SSYPLT
Trigger: AGTCAGGGGGTAGGAGGACAAGTGGAAGCAAAGGTG...TCTGCACAAGAGACAATGCTCTGGAAAAGGAAGAGGACCCCAGAAGGGTGCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CAA 90 bp TTCTTCGTCCAGCACTCATCCATTGCTTCTGTTTCACGCTCAGCAGGGCCAGGGAAGATGAATGGCTTCTaGTGGAGAGGAGCTGTGGCT +
Preference number: 5 (lower is better)
Translates to: FFVQHSSIASVSRSAGPGKMNGF*WRGAVA
Trigger: AGCCACAGCTCCTCTCCACAAGAAGCCATTCATCTT...CCCTGGCCCTGCTGAGCGTGAAACAGAAGCAATGGATGAGTGCTGGACGAAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CAA 90 bp TTCTTCGTCCAGCACTCATCCATTGCTTCTGTTTCACGCTCAGCAGGGCCAGGGTCAAGAGGAGTGGGTTaGAGCAGGAAAAGTTGTGGG +
Preference number: 5 (lower is better)
Translates to: FFVQHSSIASVSRSAGPGSRGVG*SRKSCG
Trigger: CCCACAACTTTTCCTGCTCAAACCCACTCCTCTTGA...CCCTGGCCCTGCTGAGCGTGAAACAGAAGCAATGGATGAGTGCTGGACGAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS TCA 90 bp GGGCAGAGGTTTTTGCCCTTCAGAATGATGGGCGATCCTGGCTTTTaGTCCAAGACTCCAGTAGGGCTAAGCAGTTCAAAGGTCGGGTTG +
Preference number: 5 (lower is better)
Translates to: GQRFLPFRMMGDPGF*SKTPVGLSSSKVGL
Trigger: CAACCCGACCTTTGAACTGCTTAGCCCTACTGGAGTCTTGGATCAAAAGCCAGGATCGCCCATCATTCTGAAGGGCAAAAACCTCTGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS TCA 90 bp AGGGTGCTGCTAGTCCCACCTTCTCCCCGTGCTGACCTGAGGTCTTaGGTTGTCATTCCCACCATTTCTATCAGTGGTCCCATGATTTCA +
Preference number: 5 (lower is better)
Translates to: RVLLVPPSPRADLRS*VVIPTISISGPMIS
Trigger: TGAAATCATGGGACCACTGATAGAAATGGTGGGAATGACAACTCAAGACCTCAGGTCAGCACGGGGAGAAGGTGGGACTAGCAGCACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486969.1
CDS CCA 90 bp TCATGGGCCCCAAACTTTCCCAAATGTCTCAGTAGTGCCAGGTCTTaGGGAAGATCTGCTTTACCCAGCCTCAAGCCCTTCCACGATGAT +
Preference number: 5 (lower is better)
Translates to: SWAPNFPKCLSSARS*GRSALPSLKPFHDD
Trigger: ATCATCGTGGAAGGGCTTGAGGCTGGGTAAAGCAGATCTTCCCCAAGACCTGGCACTACTGAGACATTTGGGAAAGTTTGGGGCCCATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483048.1
CDS-3UTR CAA 90 bp GTCTTGCCAAGCACCCTTCTGGGGTCCTCTTCCTTTTCCAGAGCATTGTCTCTTTGGACGGTCAAGTGGTaGAAGGTCCAGTCACGATTC +
Preference number: 5 (lower is better)
Translates to: VLPSTLLGSSSFSRALSLWTVKW*KVQSRF
Trigger: GAATCGTGACTGGACCTTCAACCACTTGACCGTCCA...AAGAGACAATGCTCTGGAAAAGGAAGAGGACCCCAGAAGGGTGCTTGGCAAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CAA 90 bp GTCTTGCCAAGCACCCTTCTGGGGTCCTCTTCCTTTTCCAGAGCATTGTCTCTTTCCTTGATCTGCAAGTaGATGGCCCGGATAGGGAAG +
Preference number: 5 (lower is better)
Translates to: VLPSTLLGSSSFSRALSLSLICK*MARIGK
Trigger: CTTCCCTATCCGGGCCATCAACTTGCAGATCAAGGA...AAGAGACAATGCTCTGGAAAAGGAAGAGGACCCCAGAAGGGTGCTTGGCAAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CAA 90 bp TCTGCTTTCTTCCTTTGCTGGACCACTTTTCCTACAAAACTGGTACCCTGTGCCATGACAGGGACATCCTaGGGCCCAGGTGAGATGCAG +
Preference number: 5 (lower is better)
Translates to: SAFFLCWTTFPTKLVPCAMTGTS*GPGEMQ
Trigger: CTGCATCTCACCTGGGCCCAAGGATGTCCCTGTCAT...GGCACAGGGTACCAGTTTTGTAGGAAAAGTGGTCCAGCAAAGGAAGAAAGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CAA 90 bp GCTCCCTATTTGTTCTGCCCAGGCCATTCTTCGTCCAGCACTCATCCATTGCTTCAGTCCTCTGAAATATaGATCCGGCCCTCCTGGAAG +
Preference number: 5 (lower is better)
Translates to: APYLFCPGHSSSSTHPLLQSSEI*IRPSWK
Trigger: CTTCCAGGAGGGCCGGATCAATATTTCAGAGGACTG...AAGCAATGGATGAGTGCTGGACGAAGAATGGCCTGGGCAGAACAAATAGGGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CAA 90 bp GAGAAGTCATCCACTTGTCCTTCACACTCACAAGTCCGTGAGAGGCAGAAAGAGACCAGATGCCACACCTaGACCCCACTTTCCAGGTCT +
Preference number: 5 (lower is better)
Translates to: EKSSTCPSHSQVRERQKETRCHT*TPLSRS
Trigger: AGACCTGGAAAGTGGGGTCAAGGTGTGGCATCTGGT...CTCTTTCTGCCTCTCACGGACTTGTGAGTGTGAAGGACAAGTGGATGACTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CAA 90 bp GAGGCAGAACTGTCCCCAGCTCGTGCCTCTCGGCTTGAAGAACCACCTTCTCCCCTACACTCAGGAGAATaGGTTATCCATAGTTTTAGG +
Preference number: 5 (lower is better)
Translates to: EAELSPARASRLEEPPSPLHSGE*VIHSFR
Trigger: CCTAAAACTATGGATAACCAATTCTCCTGAGTGTAG...GGGAGAAGGTGGTTCTTCAAGCCGAGAGGCACGAGCTGGGGACAGTTCTGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CAA 90 bp CCCACTGGCTTCTATGGGGCCTTTGGACCTGGGCATGGAGCTTTGGTCTCTTTGGGAGCTTTGGTCTCTTaGTTTGGAATCTACACTCAG +
Preference number: 5 (lower is better)
Translates to: PTGFYGAFGPGHGALVSLGALVS*FGIYTQ
Trigger: CTGAGTGTAGATTCCAAACAAAGAGACCAAAGCTCC...CAAAGAGACCAAAGCTCCATGCCCAGGTCCAAAGGCCCCATAGAAGCCAGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CAA 90 bp GAGAAGTCATCCACTTGTCCTTCACACTCACAAGTCCGTGAGAGGCAGAAAGAGCCCAGTCCCACACCTTaGCTTCCACTTGTCCTCCTA +
Preference number: 5 (lower is better)
Translates to: EKSSTCPSHSQVRERQKEPSPTP*LPLVLL
Trigger: TAGGAGGACAAGTGGAAGCAAAGGTGTGGGACTGGG...CTCTTTCTGCCTCTCACGGACTTGTGAGTGTGAAGGACAAGTGGATGACTTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CAA 90 bp TTCTTCGTCCAGCACTCATCCATTGCTTCTGTTTCACGCTCAGCAGGGCCAGGGACTGCCTTTAACTTCTaGGTGGAGCAAAGCCTGGAT +
Preference number: 5 (lower is better)
Translates to: FFVQHSSIASVSRSAGPGTAFNF*VEQSLD
Trigger: ATCCAGGCTTTGCTCCACCAAGAAGTTAAAGGCAGT...CCCTGGCCCTGCTGAGCGTGAAACAGAAGCAATGGATGAGTGCTGGACGAAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS CCA 90 bp TCTCCCTGCCCGCAGCTCGGAATCAGGGAGACGACCAAATCCACATaGAGTCCAAATTCATTAAAATCCACGTCAAGCCACCAGACACTT +
Preference number: 5 (lower is better)
Translates to: SPCPQLGIRETTKST*SPNSLKSTSSHQTL
Trigger: AAGTGTCTGGTGGCTTGACGTGGATTTTAATGAATTTGGACTCCATGTGGATTTGGTCGTCTCCCTGATTCCGAGCTGCGGGCAGGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367033.4
ENST00000486969.1
CDS-3UTR CAA 90 bp GTTGGTCTGCTTTCTTCCTTTGCTGGACCACTTTTCCTACAAAACTGGTACCCTCTGCTTGCAGAACAGTaGGAGCTGGCTGCTCGGATC +
Preference number: 5 (lower is better)
Translates to: VGLLSSFAGPLFLQNWYPLLAEQ*ELAARI
Trigger: GATCCGAGCAGCCAGCTCCAACTGTTCTGCAAGCAG...AGGGTACCAGTTTTGTAGGAAAAGTGGTCCAGCAAAGGAAGAAAGCAGACCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CAA 90 bp CAACCGGGATGCACCTGGAGATTTATCAGCCAGAAGCTTTCAAATGCTCCCTATGCAGCTTGTTCCTCTTaGTCTTCCCCAGTCCCACAC +
Preference number: 5 (lower is better)
Translates to: QPGCTWRFISQKLSNAPYAACSS*SSPVPH
Trigger: GTGTGGGACTGGGGAAGACAAAGAGGAACAAGCTGC...ATAGGGAGCATTTGAAAGCTTCTGGCTGATAAATCTCCAGGTGCATCCCGGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CAA 90 bp CAACCGGGATGCACCTGGAGATTTATCAGCCAGAAGCTTTCAAATGCTCCCTATTTAGCATCCTCTGTCTaGCCAAGCACCCTTCTGGGG +
Preference number: 5 (lower is better)
Translates to: QPGCTWRFISQKLSNAPYLASSV*PSTLLG
Trigger: CCCCAGAAGGGTGCTTGGCAAGACAGAGGATGCTAA...ATAGGGAGCATTTGAAAGCTTCTGGCTGATAAATCTCCAGGTGCATCCCGGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CAA 90 bp GAGAAGTCATCCACTTGTCCTTCACACTCACAAGTCCGTGAGAGGCAGAAAGAGAGGGAGTGCTCTCCATaGCCCATTAGCATCCTCTGT +
Preference number: 5 (lower is better)
Translates to: EKSSTCPSHSQVRERQKERECSP*PISILC
Trigger: ACAGAGGATGCTAATGGGCAATGGAGAGCACTCCCT...CTCTTTCTGCCTCTCACGGACTTGTGAGTGTGAAGGACAAGTGGATGACTTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CAA 90 bp TTCTTCGTCCAGCACTCATCCATTGCTTCTGTTTCACGCTCAGCAGGGCCAGGGATTTCCTGTCCTCATTaGGTGGAACTGAAGGAAGGT +
Preference number: 5 (lower is better)
Translates to: FFVQHSSIASVSRSAGPGISCPH*VELKEG
Trigger: ACCTTCCTTCAGTTCCACCAAATGAGGACAGGAAAT...CCCTGGCCCTGCTGAGCGTGAAACAGAAGCAATGGATGAGTGCTGGACGAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CAA 90 bp GCTCCCTATTTGTTCTGCCCAGGCCATTCTTCGTCCAGCACTCATCCATTGCTTTCCAGCACTCATCCATaGCTTCTGTTTCACGCTCAG +
Preference number: 5 (lower is better)
Translates to: APYLFCPGHSSSSTHPLLSSTHP*LLFHAQ
Trigger: CTGAGCGTGAAACAGAAGCAATGGATGAGTGCTGGA...AAGCAATGGATGAGTGCTGGACGAAGAATGGCCTGGGCAGAACAAATAGGGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CAA 90 bp GGCCTTTGGACCTGGGCATGGAGCTTTGGTCTCTTTGTTTGGAATCTACACTCAAGCTTGTTGACATTGTaGGTGAGGGTGAGCACTTCG +
Preference number: 5 (lower is better)
Translates to: GLWTWAWSFGLFVWNLHSSLLTL*VRVSTS
Trigger: CGAAGTGCTCACCCTCACCAACAATGTCAACAAGCT...TGAGTGTAGATTCCAAACAAAGAGACCAAAGCTCCATGCCCAGGTCCAAAGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CAA 90 bp GTCTTGCCAAGCACCCTTCTGGGGTCCTCTTCCTTTTCCAGAGCATTGTCTCTTCGAATCTTTTTCAGCTaGCCACTCTTAGTCCCCACA +
Preference number: 5 (lower is better)
Translates to: VLPSTLLGSSSFSRALSLRIFFS*PLLVPT
Trigger: TGTGGGGACTAAGAGTGGCAAGCTGAAAAAGATTCG...AAGAGACAATGCTCTGGAAAAGGAAGAGGACCCCAGAAGGGTGCTTGGCAAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CAA 90 bp GGCCTTTGGACCTGGGCATGGAGCTTTGGTCTCTTTGTTTGGAATCTACACTCAAAATCCACGGCCAGATaGCTGATGTCCATGCCATCA +
Preference number: 5 (lower is better)
Translates to: GLWTWAWSFGLFVWNLHSKSTAR*LMSMPS
Trigger: TGATGGCATGGACATCAGCAATCTGGCCGTGGATTT...TGAGTGTAGATTCCAAACAAAGAGACCAAAGCTCCATGCCCAGGTCCAAAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CAA 90 bp GTTGGTCTGCTTTCTTCCTTTGCTGGACCACTTTTCCTACAAAACTGGTACCCTTTGGAGCACTTGACATaGTGGCTGGACCAGTCGAGC +
Preference number: 5 (lower is better)
Translates to: VGLLSSFAGPLFLQNWYPLEHLT*WLDQSS
Trigger: GCTCGACTGGTCCAGCCACAATGTCAAGTGCTCCAA...AGGGTACCAGTTTTGTAGGAAAAGTGGTCCAGCAAAGGAAGAAAGCAGACCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CAA 90 bp GTCTTGCCAAGCACCCTTCTGGGGTCCTCTTCCTTTTCCAGAGCATTGTCTCTTCAAAATCTCGGTGATTaGAGGGTTGGAGCACTTGAC +
Preference number: 5 (lower is better)
Translates to: VLPSTLLGSSSFSRALSLQNLGD*RVGALD
Trigger: GTCAAGTGCTCCAACCCTCAAATCACCGAGATTTTG...AAGAGACAATGCTCTGGAAAAGGAAGAGGACCCCAGAAGGGTGCTTGGCAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CAA 90 bp CAAGCACCCTTCTGGGGTCCTCTTCCTTTTCCAGAGCATTGTCTCTTGTGCAGATGCATTTGCAGCCGCTaGAGAGTGAGGTCATTTTCT +
Preference number: 5 (lower is better)
Translates to: QAPFWGPLPFPEHCLLCRCICSR*RVRSFS
Trigger: AGAAAATGACCTCACTCTCAAGCGGCTGCAAATGCA...TCTGCACAAGAGACAATGCTCTGGAAAAGGAAGAGGACCCCAGAAGGGTGCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CAA 90 bp TCTGCTTTCTTCCTTTGCTGGACCACTTTTCCTACAAAACTGGTACCCTGTGCCTTCTCGTTGTCAGGGTaGACGCAGTTCAGGATCAGG +
Preference number: 5 (lower is better)
Translates to: SAFFLCWTTFPTKLVPCAFSLSG*TQFRIR
Trigger: CCTGATCCTGAACTGCGTCAACCCTGACAACGAGAA...GGCACAGGGTACCAGTTTTGTAGGAAAAGTGGTCCAGCAAAGGAAGAAAGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CAA 90 bp TTCTTCGTCCAGCACTCATCCATTGCTTCTGTTTCACGCTCAGCAGGGCCAGGGGTGTTTGGTGCATACTaGTGCTCATCATTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: FFVQHSSIASVSRSAGPGVFGAY*CSSFFF
Trigger: GAAGAAGAATGATGAGCACAAGTATGCACCAAACAC...CCCTGGCCCTGCTGAGCGTGAAACAGAAGCAATGGATGAGTGCTGGACGAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CAA 90 bp GCTCCCTATTTGTTCTGCCCAGGCCATTCTTCGTCCAGCACTCATCCATTGCTTCAAAAGAAAGTGGCCTaGGCATGGCTGGTTGTGAAT +
Preference number: 5 (lower is better)
Translates to: APYLFCPGHSSSSTHPLLQKKVA*AWLVVN
Trigger: ATTCACAACCAGCCATGCCAAGGCCACTTTCTTTTG...AAGCAATGGATGAGTGCTGGACGAAGAATGGCCTGGGCAGAACAAATAGGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CAA 90 bp GAGAAGTCATCCACTTGTCCTTCACACTCACAAGTCCGTGAGAGGCAGAAAGAGGGGATCAAAATGGTTTaGAGAGCCCTGCTGTGGAGA +
Preference number: 5 (lower is better)
Translates to: EKSSTCPSHSQVRERQKEGIKMV*RALLWR
Trigger: TCTCCACAGCAGGGCTCTCAAAACCATTTTGATCCC...CTCTTTCTGCCTCTCACGGACTTGTGAGTGTGAAGGACAAGTGGATGACTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS TCA 90 bp TTGACAGATTCTTTGCCATTGAATTTGACTCGGATCCTTGGCTCCTaGATGACATCCAGGTTGAAGCCTGTGATGGTCAGGGGTGTGTGG +
Preference number: 5 (lower is better)
Translates to: LTDSLPLNLTRILGS*MTSRLKPVMVRGVW
Trigger: CCACACACCCCTGACCATCACAGGCTTCAACCTGGATGTCATTCAGGAGCCAAGGATCCGAGTCAAATTCAATGGCAAAGAATCTGTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS GCA 90 bp GGAAGATCTGCTTTACCCAGCCTCAAGCCCTTCCACGATGATTTCTaGCTATCTTCCAAAACACAACAGGATCCCTCACTTTCCTCTAGC +
Preference number: 5 (lower is better)
Translates to: GRSALPSLKPFHDDF*LSSKTQQDPSLSSS
Trigger: GCTAGAGGAAAGTGAGGGATCCTGTTGTGTTTTGGAAGATAGGCAGAAATCATCGTGGAAGGGCTTGAGGCTGGGTAAAGCAGATCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483048.1
CDS-3UTR CAA 90 bp AAGTTCCATACTCCTCTGGCTGCCGGGATAATTCCAGGTTTTACTGGCCTCTGTTCTTTGCCATTGAATTaGACTCGGATCCTTGGCTCC +
Preference number: 5 (lower is better)
Translates to: KFHTPLAAGIIPGFTGLCSLPLN*TRILGS
Trigger: GGAGCCAAGGATCCGAGTCAAATTCAATGGCAAAGA...ACAGAGGCCAGTAAAACCTGGAATTATCCCGGCAGCCAGAGGAGTATGGAACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CAA 90 bp GTTGGTCTGCTTTCTTCCTTTGCTGGACCACTTTTCCTACAAAACTGGTACCCTCACTCCTTTAGGAACTaGTGCAGGAGGAAGGCGAAC +
Preference number: 5 (lower is better)
Translates to: VGLLSSFAGPLFLQNWYPHSFRN*CRRKAN
Trigger: GTTCGCCTTCCTCCTGCACAAGTTCCTAAAGGAGTG...AGGGTACCAGTTTTGTAGGAAAAGTGGTCCAGCAAAGGAAGAAAGCAGACCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CAA 90 bp CCTCTGTCTTGCCAAGCACCCTTCTGGGGTCCTCTTCCTTTTCCAGAGCATTGTGAGCTCTTGATGGCTTaGCAATTTGTGCAAAGTTCT +
Preference number: 5 (lower is better)
Translates to: PLSCQAPFWGPLPFPEHCELLMA*QFVQSS
Trigger: AGAACTTTGCACAAATTGCAAAGCCATCAAGAGCTC...ACAATGCTCTGGAAAAGGAAGAGGACCCCAGAAGGGTGCTTGGCAAGACAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CAA 90 bp GCAGCCAGAAGAGATGGTGGCAGTAGAAACAAGAGCAGCTCTCATCGCTGGGGGTATGCTCTTCAAGTATaGCTTGCTGTAAACAGTGTT +
Preference number: 5 (lower is better)
Translates to: AARRDGGSRNKSSSHRWGYALQV*LAVNSV
Trigger: AACACTGTTTACAGCAAGCAATACTTGAAGAGCATA...CCCCCAGCGATGAGAGCTGCTCTTGTTTCTACTGCCACCATCTCTTCTGGCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CAA 90 bp GAGAAGTCATCCACTTGTCCTTCACACTCACAAGTCCGTGAGAGGCAGAAAGAGGCTGGAAGAAAGACCTaGGTTTTGTTCCGTGCTGTT +
Preference number: 5 (lower is better)
Translates to: EKSSTCPSHSQVRERQKEAGRKT*VLFRAV
Trigger: AACAGCACGGAACAAAACCAAGGTCTTTCTTCCAGC...CTCTTTCTGCCTCTCACGGACTTGTGAGTGTGAAGGACAAGTGGATGACTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS CCA 90 bp ACACACATTGACAGATTCTTTGCCATTGAATTTGACTCGGATCCTTaGCTCCTGAATGACATCCAGGTTGAAGCCTGTGATGGTCAGGGG +
Preference number: 5 (lower is better)
Translates to: THIDRFFAIEFDSDP*LLNDIQVEACDGQG
Trigger: CCCCTGACCATCACAGGCTTCAACCTGGATGTCATTCAGGAGCCAAGGATCCGAGTCAAATTCAATGGCAAAGAATCTGTCAATGTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CAA 90 bp TCTGCTTTCTTCCTTTGCTGGACCACTTTTCCTACAAAACTGGTACCCTGTGCCTCACTGGTCAACTCATaGATATCCGTCTGGAGCTCA +
Preference number: 5 (lower is better)
Translates to: SAFFLCWTTFPTKLVPCASLVNS*ISVWSS
Trigger: TGAGCTCCAGACGGATATCAATGAGTTGACCAGTGA...GGCACAGGGTACCAGTTTTGTAGGAAAAGTGGTCCAGCAAAGGAAGAAAGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CAA 90 bp TACTATCTAGGTACACATCTCCTCTCAAAAGATGAGAATATACAGGTGTGTGGTGGTGATGTCCTCATCTaGCAGCACGACCCGGGCGAT +
Preference number: 5 (lower is better)
Translates to: YYLGTHLLSKDENIQVCGGDVLI*QHDPGD
Trigger: ATCGCCCGGGTCGTGCTGCAAGATGAGGACATCACC...ACCACACACCTGTATATTCTCATCTTTTGAGAGGAGATGTGTACCTAGATAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CAA 90 bp GTCTTGCCAAGCACCCTTCTGGGGTCCTCTTCCTTTTCCAGAGCATTGTCTCTTGTTTTTGCGAAGTGTTaGGTGCATACTTGTGCTCAT +
Preference number: 5 (lower is better)
Translates to: VLPSTLLGSSSFSRALSLVFAKC*VHTCAH
Trigger: ATGAGCACAAGTATGCACCAAACACTTCGCAAAAAC...AAGAGACAATGCTCTGGAAAAGGAAGAGGACCCCAGAAGGGTGCTTGGCAAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CAA 90 bp AACCAGCTTCCTGAAGGATATAAATTCGCTGGAAGAAAGACCTTGGTTTTGTTCACAGGACAGGCACAGTaGGTGGGCACTGCAGTTGTA +
Preference number: 5 (lower is better)
Translates to: NQLPEGYKFAGRKTLVLFTGQAQ*VGTAVV
Trigger: TACAACTGCAGTGCCCACCAACTGTGCCTGTCCTGT...GAACAAAACCAAGGTCTTTCTTCCAGCGAATTTATATCCTTCAGGAAGCTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CAA 90 bp TACTATCTAGGTACACATCTCCTCTCAAAAGATGAGAATATACAGGTGTGTGGTGGACCTCGGATTGGGTaGAGTGACAGCACAGAAGGG +
Preference number: 5 (lower is better)
Translates to: YYLGTHLLSKDENIQVCGGPRIG*SDSTEG
Trigger: CCCTTCTGTGCTGTCACTCAACCCAATCCGAGGTCC...ACCACACACCTGTATATTCTCATCTTTTGAGAGGAGATGTGTACCTAGATAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CAA 90 bp GTCTTGCCAAGCACCCTTCTGGGGTCCTCTTCCTTTTCCAGAGCATTGTCTCTTACATTGACAGATTCTTaGCCATTGAATTTGACTCGG +
Preference number: 5 (lower is better)
Translates to: VLPSTLLGSSSFSRALSLTLTDS*PLNLTR
Trigger: CCGAGTCAAATTCAATGGCAAAGAATCTGTCAATGT...AAGAGACAATGCTCTGGAAAAGGAAGAGGACCCCAGAAGGGTGCTTGGCAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CAA 90 bp CAACCGGGATGCACCTGGAGATTTATCAGCCAGAAGCTTTCAAATGCTCCCTATTACTGGCCTCTGTTTTaGCGAAGTGTTTGGTGCATA +
Preference number: 5 (lower is better)
Translates to: QPGCTWRFISQKLSNAPYYWPLF*RSVWCI
Trigger: TATGCACCAAACACTTCGCAAAAACAGAGGCCAGTA...ATAGGGAGCATTTGAAAGCTTCTGGCTGATAAATCTCCAGGTGCATCCCGGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CAA 90 bp GAGAAGTCATCCACTTGTCCTTCACACTCACAAGTCCGTGAGAGGCAGAAAGAGCTTTGGTCTCTTTGTTaGGAATCTACACTCAGGAGA +
Preference number: 5 (lower is better)
Translates to: EKSSTCPSHSQVRERQKELWSLC*ESTLRR
Trigger: TCTCCTGAGTGTAGATTCCAAACAAAGAGACCAAAG...CTCTTTCTGCCTCTCACGGACTTGTGAGTGTGAAGGACAAGTGGATGACTTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CAA 90 bp GTCTTGCCAAGCACCCTTCTGGGGTCCTCTTCCTTTTCCAGAGCATTGTCTCTTAATTGTGTCCTCAGCTaGCAAAATAGGAGTGTTTCA +
Preference number: 5 (lower is better)
Translates to: VLPSTLLGSSSFSRALSLNCVLS*QNRSVS
Trigger: TGAAACACTCCTATTTTGCAAGCTGAGGACACAATT...AAGAGACAATGCTCTGGAAAAGGAAGAGGACCCCAGAAGGGTGCTTGGCAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CAA 90 bp TACTATCTAGGTACACATCTCCTCTCAAAAGATGAGAATATACAGGTGTGTGGTGGAGGGCAGAGGTTTTaGCCCTTCAGAATGATGGGC +
Preference number: 5 (lower is better)
Translates to: YYLGTHLLSKDENIQVCGGGQRF*PFRMMG
Trigger: GCCCATCATTCTGAAGGGCAAAAACCTCTGCCCTCC...ACCACACACCTGTATATTCTCATCTTTTGAGAGGAGATGTGTACCTAGATAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CAA 90 bp TACTATCTAGGTACACATCTCCTCTCAAAAGATGAGAATATACAGGTGTGTGGTTCAGCAAAAGCTTCCTaGCACTCCAAGGCCACACGG +
Preference number: 5 (lower is better)
Translates to: YYLGTHLLSKDENIQVCGSAKAS*HSKATR
Trigger: CCGTGTGGCCTTGGAGTGCAAGGAAGCTTTTGCTGA...ACCACACACCTGTATATTCTCATCTTTTGAGAGGAGATGTGTACCTAGATAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CAA 90 bp TCTGCTTTCTTCCTTTGCTGGACCACTTTTCCTACAAAACTGGTACCCTGTGCCAGAATTAAACAAAAGTaGGACGGGATTAACAGGGCG +
Preference number: 5 (lower is better)
Translates to: SAFFLCWTTFPTKLVPCARIKQK*DGINRA
Trigger: CGCCCTGTTAATCCCGTCCAACTTTTGTTTAATTCT...GGCACAGGGTACCAGTTTTGTAGGAAAAGTGGTCCAGCAAAGGAAGAAAGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CAA 90 bp TACTATCTAGGTACACATCTCCTCTCAAAAGATGAGAATATACAGGTGTGTGGTAGGGGAGGAGAACTGTaGCCTGCTAAGTTGGTGGCA +
Preference number: 5 (lower is better)
Translates to: YYLGTHLLSKDENIQVCGRGGEL*PAKLVA
Trigger: TGCCACCAACTTAGCAGGCAACAGTTCTCCTCCCCT...ACCACACACCTGTATATTCTCATCTTTTGAGAGGAGATGTGTACCTAGATAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CAA 90 bp CATTGGTACTATCTAGGTACACATCTCCTCTCAAAAGATGAGAATATACAGGTGACGTATGAGTGGAACTaGGGGTCATCCTTGCAGAGC +
Preference number: 5 (lower is better)
Translates to: HWYYLGTHLLSKDENIQVTYEWN*GSSLQS
Trigger: GCTCTGCAAGGATGACCCCAAGTTCCACTCATACGT...CACCTGTATATTCTCATCTTTTGAGAGGAGATGTGTACCTAGATAGTACCAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CAA 90 bp TACTATCTAGGTACACATCTCCTCTCAAAAGATGAGAATATACAGGTGTGTGGTACACGATCTCACTCATaGACCTCCCGTAGAACTCGC +
Preference number: 5 (lower is better)
Translates to: YYLGTHLLSKDENIQVCGTRSHS*TSRRTR
Trigger: GCGAGTTCTACGGGAGGTCAATGAGTGAGATCGTGT...ACCACACACCTGTATATTCTCATCTTTTGAGAGGAGATGTGTACCTAGATAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CAA 90 bp AAGTTCCATACTCCTCTGGCTGCCGGGATAATTCCAGGTTTTACTGGCCTCTGTACAACTTTACACACATaGACAGATTCTTTGCCATTG +
Preference number: 5 (lower is better)
Translates to: KFHTPLAAGIIPGFTGLCTTLHT*TDSLPL
Trigger: CAATGGCAAAGAATCTGTCAATGTGTGTAAAGTTGT...ACAGAGGCCAGTAAAACCTGGAATTATCCCGGCAGCCAGAGGAGTATGGAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CAA 90 bp AAGTTCCATACTCCTCTGGCTGCCGGGATAATTCCAGGTTTTACTGGCCTCTGTAGCAAGGATTGGACATaGTTAAAGACAAATCCAAAC +
Preference number: 5 (lower is better)
Translates to: KFHTPLAAGIIPGFTGLCSKDWT*LKTNPN
Trigger: GTTTGGATTTGTCTTTAACAATGTCCAATCCTTGCT...ACAGAGGCCAGTAAAACCTGGAATTATCCCGGCAGCCAGAGGAGTATGGAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CAA 90 bp CATTGGTACTATCTAGGTACACATCTCCTCTCAAAAGATGAGAATATACAGGTGAGCCAGGGTGAGCTCTaGATGGCTTTGCAATTTGTG +
Preference number: 5 (lower is better)
Translates to: HWYYLGTHLLSKDENIQVSQGEL*MALQFV
Trigger: CACAAATTGCAAAGCCATCAAGAGCTCACCCTGGCT...CACCTGTATATTCTCATCTTTTGAGAGGAGATGTGTACCTAGATAGTACCAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CAA 90 bp AACCAGCTTCCTGAAGGATATAAATTCGCTGGAAGAAAGACCTTGGTTTTGTTCCAGGGCCTTTGGAAATaGGAACCACTTGGAGGTAAA +
Preference number: 5 (lower is better)
Translates to: NQLPEGYKFAGRKTLVLFQGLWK*EPLGGK
Trigger: TTTACCTCCAAGTGGTTCCAATTTCCAAAGGCCCTG...GAACAAAACCAAGGTCTTTCTTCCAGCGAATTTATATCCTTCAGGAAGCTGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS-3UTR CAA 90 bp AACCAGCTTCCTGAAGGATATAAATTCGCTGGAAGAAAGACCTTGGTTTTGTTCTCAAATGCTCCCTATTaGTTCTGCCCAGGCCATTCT +
Preference number: 5 (lower is better)
Translates to: NQLPEGYKFAGRKTLVLFSNAPY*FCPGHS
Trigger: AGAATGGCCTGGGCAGAACAAATAGGGAGCATTTGA...GAACAAAACCAAGGTCTTTCTTCCAGCGAATTTATATCCTTCAGGAAGCTGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS GCA 90 bp TTCTGCAACTCGGGAATTTATAACCAGAGGAGAATGAGTTTTCTCTaGTCCTTAGACCATAAAGCAAATAAGCCCATTTACTCTCCTTCA +
Preference number: 5 (lower is better)
Translates to: FCNSGIYNQRRMSFL*SLDHKANKPIYSPS
Trigger: TGAAGGAGAGTAAATGGGCTTATTTGCTTTATGGTCTAAGGAGCAGAGAAAACTCATTCTCCTCTGGTTATAAATTCCCGAGTTGCAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483048.1
CDS-3UTR CAA 90 bp CATTGGTACTATCTAGGTACACATCTCCTCTCAAAAGATGAGAATATACAGGTGACAGATTCTTTGCCATaGAATTTGACTCGGATCCTT +
Preference number: 5 (lower is better)
Translates to: HWYYLGTHLLSKDENIQVTDSLP*NLTRIL
Trigger: AAGGATCCGAGTCAAATTCAATGGCAAAGAATCTGT...CACCTGTATATTCTCATCTTTTGAGAGGAGATGTGTACCTAGATAGTACCAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS GCA 72 bp GCCCTCCGCCGCCCTCCCGCTCCAGTCTGGCGCGGATaGCGCTCCTCCCGGCAGCTCTGGCTCCCGCGGTGG +
Preference number: 6 (lower is better)
Translates to: ALRRPPAPVWRG*RSSRQLWLPRW
Trigger: CCACCGCGGGAGCCAGAGCTGCCGGGAGGAGCGGCATCCGCGCCAGACTGGAGCGGGAGGGCGGCGGAGGGC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS CCA 72 bp CAGCCCGGCTGCCCAAGCTACTTCCCAGGGCTGGCCTaGCCTGGCTGGGCCGAGGAATGGGCTCCCCTGGGG +
Preference number: 6 (lower is better)
Translates to: QPGCPSYFPGLA*PGWAEEWAPLG
Trigger: CCCCAGGGGAGCCCATTCCTCGGCCCAGCCAGGCCAGGCCAGCCCTGGGAAGTAGCTTGGGCAGCCGGGCTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483048.1
CDS GCA 72 bp CGCCGGCTGCTGAGGGCGGCGCGAGGCCCCTCTCCCTaGCCGCAGCTCGGAATCAGGGAGACGACCAAATCC +
Preference number: 6 (lower is better)
Translates to: RRLLRAARGPSP*PQLGIRETTKS
Trigger: GGATTTGGTCGTCTCCCTGATTCCGAGCTGCGGGCAGGGAGAGGGGCCTCGCGCCGCCCTCAGCAGCCGGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367033.4
ENST00000486969.1
CDS GCA 72 bp GACCAGTCGAGCCAGGGGCTGGAAGGGCTGGTACAGTaGTGGTGGAGGGTGCACCTGCGCTCGCCGCTGCAC +
Preference number: 6 (lower is better)
Translates to: DQSSQGLEGLVQ*WWRVHLRSPLH
Trigger: GTGCAGCGGCGAGCGCAGGTGCACCCTCCACCAGCACTGTACCAGCCCTTCCAGCCCCTGGCTCGACTGGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS CCA 72 bp TCGAGCCAGGGGCTGGAAGGGCTGGTACAGTGCTGGTaGAGGGTGCACCTGCGCTCGCCGCTGCACCAGCCA +
Preference number: 6 (lower is better)
Translates to: SSQGLEGLVQCW*RVHLRSPLHQP
Trigger: TGGCTGGTGCAGCGGCGAGCGCAGGTGCACCCTCCACCAGCACTGTACCAGCCCTTCCAGCCCCTGGCTCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS CCA 72 bp CAGTCGAGCCAGGGGCTGGAAGGGCTGGTACAGTGCTaGTGGAGGGTGCACCTGCGCTCGCCGCTGCACCAG +
Preference number: 6 (lower is better)
Translates to: QSSQGLEGLVQC*WRVHLRSPLHQ
Trigger: CTGGTGCAGCGGCGAGCGCAGGTGCACCCTCCACCAGCACTGTACCAGCCCTTCCAGCCCCTGGCTCGACTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS CCA 72 bp TGTGGCTGGACCAGTCGAGCCAGGGGCTGGAAGGGCTaGTACAGTGCTGGTGGAGGGTGCACCTGCGCTCGC +
Preference number: 6 (lower is better)
Translates to: CGWTSRARGWKG*YSAGGGCTCAR
Trigger: GCGAGCGCAGGTGCACCCTCCACCAGCACTGTACCAGCCCTTCCAGCCCCTGGCTCGACTGGTCCAGCCACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS CCA 72 bp GGGAGGGGCGTGCAGGGCACCCCAGCCACCTGCACATaGTGGGCGATCTCGGAGAAGTCCAGACCCAGGTTC +
Preference number: 6 (lower is better)
Translates to: GRGVQGTPATCT*WAISEKSRPRF
Trigger: GAACCTGGGTCTGGACTTCTCCGAGATCGCCCACCATGTGCAGGTGGCTGGGGTGCCCTGCACGCCCCTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS TCA 72 bp CCCGGCCCGGGTGCAGCCGAAGGGCAGGGACACGTATaGGTGGAACTTGGGGTCATCCTTGCAGAGCCGCAC +
Preference number: 6 (lower is better)
Translates to: PGPGAAEGQGHV*VELGVILAEPH
Trigger: GTGCGGCTCTGCAAGGATGACCCCAAGTTCCACTCATACGTGTCCCTGCCCTTCGGCTGCACCCGGGCCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS CCA 72 bp AGGGGCGTGCAGGGCACCCCAGCCACCTGCACATGGTaGGCGATCTCGGAGAAGTCCAGACCCAGGTTCACG +
Preference number: 6 (lower is better)
Translates to: RGVQGTPATCTW*AISEKSRPRFT
Trigger: CGTGAACCTGGGTCTGGACTTCTCCGAGATCGCCCACCATGTGCAGGTGGCTGGGGTGCCCTGCACGCCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS CAA 90 bp CAAAGCCACCAGGCTCCTGGAGTCCCTTCACAGTGCCCGTGGCCATaGTCCGGAAGAAGGCAGCCAGGAGCCCCAGGCTCAGCCTCGGAG +
Preference number: 6 (lower is better)
Translates to: QSHQAPGVPSQCPWP*SGRRQPGAPGSASE
Trigger: CTCCGAGGCTGAGCCTGGGGCTCCTGGCTGCCTTCTTCCGGACAATGGCCACGGGCACTGTGAAGGGACTCCAGGAGCCTGGTGGCTTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483048.1
CDS CAA 72 bp CAGGCTCCTGGAGTCCCTTCACAGTGCCCGTGGCCATaGTCCGGAAGAAGGCAGCCAGGAGCCCCAGGCTCA +
Preference number: 6 (lower is better)
Translates to: QAPGVPSQCPWP*SGRRQPGAPGS
Trigger: TGAGCCTGGGGCTCCTGGCTGCCTTCTTCCGGACAATGGCCACGGGCACTGTGAAGGGACTCCAGGAGCCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483048.1
CDS TCA 72 bp GCAGAGCGGGGACCCGGTGGATGGCTCCTTGTATGTTaGGGACACACTCATAGCCTCGCTGGCCGGACTGCG +
Preference number: 6 (lower is better)
Translates to: AERGPGGWLLVC*GHTHSLAGRTA
Trigger: CGCAGTCCGGCCAGCGAGGCTATGAGTGTGTCCTCAACATACAAGGAGCCATCCACCGGGTCCCCGCTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS GCA 72 bp GCGGCGGTGAGGAGACGGCTCCTGTGTGTGCTCATCTaGTCCACCTTCCCCGGTTGGCCCTCACATGATTCC +
Preference number: 6 (lower is better)
Translates to: AAVRRRLLCVLI*STFPGWPSHDS
Trigger: GGAATCATGTGAGGGCCAACCGGGGAAGGTGGAGCAGATGAGCACACACAGGAGCCGTCTCCTCACCGCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS CCA 72 bp CGTAGGAGGCCACAGAGGTCATGCGGTCCCTGCTGGTaGTGTACAGGGTCAGGCCCTCCACTGGAGTTGAGC +
Preference number: 6 (lower is better)
Translates to: RRRPQRSCGPCW*CTGSGPPLELS
Trigger: GCTCAACTCCAGTGGAGGGCCTGACCCTGTACACCACCAGCAGGGACCGCATGACCTCTGTGGCCTCCTACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367033.4
ENST00000460870.1
CDS CAA 72 bp CCGGTTGATGGCCCCCACATAGACGGCCCCCGTCCCTaGGTGGACGGTCAAGTGGTTGAAGGTCCAGTCACG +
Preference number: 6 (lower is better)
Translates to: PVDGPHIDGPRP*VDGQVVEGPVT
Trigger: CGTGACTGGACCTTCAACCACTTGACCGTCCACCAAGGGACGGGGGCCGTCTATGTGGGGGCCATCAACCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS TCA 72 bp CGATGCGTGAGGTGTAGAAGAGGTCTCCAGCGGAGTTaGTGGCCACACCCTCAGGGGTCTCGGGCTGGACAG +
Preference number: 6 (lower is better)
Translates to: RCVRCRRGLQRS*WPHPQGSRAGQ
Trigger: CTGTCCAGCCCGAGACCCCTGAGGGTGTGGCCATCAACTCCGCTGGAGACCTCTTCTACACCTCACGCATCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS GCA 72 bp CCAGGTGAGATGCAGATGACCTGGCTCCCGGACACCTaGCCCTCCACCTCTGTCAGGTTCCCAAAGGCACAG +
Preference number: 6 (lower is better)
Translates to: PGEMQMTWLPDT*PSTSVRFPKAQ
Trigger: CTGTGCCTTTGGGAACCTGACAGAGGTGGAGGGGCAGGTGTCCGGGAGCCAGGTCATCTGCATCTCACCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS CCA 72 bp CTCCTGTGTGTGCTCATCTGCTCCACCTTCCCCGGTTaGCCCTCACATGATTCCAGCTCGGCGACGTCGGTC +
Preference number: 6 (lower is better)
Translates to: LLCVLICSTFPG*PSHDSSSATSV
Trigger: GACCGACGTCGCCGAGCTGGAATCATGTGAGGGCCAACCGGGGAAGGTGGAGCAGATGAGCACACACAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS GCA 72 bp TGTAAACGTAGGAGGCCACAGAGGTCATGCGGTCCCTaGTGGTGGTGTACAGGGTCAGGCCCTCCACTGGAG +
Preference number: 6 (lower is better)
Translates to: CKRRRPQRSCGP*WWCTGSGPPLE
Trigger: CTCCAGTGGAGGGCCTGACCCTGTACACCACCAGCAGGGACCGCATGACCTCTGTGGCCTCCTACGTTTACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367033.4
ENST00000460870.1
CDS GCA 72 bp CCTTCACAGAGGGGTCTCCGTGGTGGGGCCTGGGCTTaGCATGAGGTCTCCCAAGAGAACAATGGAGCATGG +
Preference number: 6 (lower is better)
Translates to: PSQRGLRGGAWA*HEVSQENNGAW
Trigger: CCATGCTCCATTGTTCTCTTGGGAGACCTCATGGCAAGCCCAGGCCCCACCACGGAGACCCCTCTGTGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463510.1
CDS CCA 72 bp AAACGTAGGAGGCCACAGAGGTCATGCGGTCCCTGCTaGTGGTGTACAGGGTCAGGCCCTCCACTGGAGTTG +
Preference number: 6 (lower is better)
Translates to: KRRRPQRSCGPC*WCTGSGPPLEL
Trigger: CAACTCCAGTGGAGGGCCTGACCCTGTACACCACCAGCAGGGACCGCATGACCTCTGTGGCCTCCTACGTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367033.4
ENST00000460870.1
CDS CCA 72 bp AGGCGTACTGGCCCGGAGGTGGTTCCCACGAGGGCATaGCCCATCTCACAGACAATCTGCTCAGCGATGATG +
Preference number: 6 (lower is better)
Translates to: RRTGPEVVPTRA*PISQTICSAMM
Trigger: CATCATCGCTGAGCAGATTGTCTGTGAGATGGGCCATGCCCTCGTGGGAACCACCTCCGGGCCAGTACGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS CCA 72 bp GAACTCTGGCTTACACTCGCCAATACACAGGCGTACTaGCCCGGAGGTGGTTCCCACGAGGGCATGGCCCAT +
Preference number: 6 (lower is better)
Translates to: ELWLTLANTQAY*PGGGSHEGMAH
Trigger: ATGGGCCATGCCCTCGTGGGAACCACCTCCGGGCCAGTACGCCTGTGTATTGGCGAGTGTAAGCCAGAGTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS CCA 72 bp GGCAGTCCTTCACAGAGGGGTCTCCGTGGTGGGGCCTaGGCTTGCCATGAGGTCTCCCAAGAGAACAATGGA +
Preference number: 6 (lower is better)
Translates to: GSPSQRGLRGGA*ACHEVSQENNG
Trigger: TCCATTGTTCTCTTGGGAGACCTCATGGCAAGCCCAGGCCCCACCACGGAGACCCCTCTGTGAAGGACTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463510.1
CDS TCA 72 bp ATCCACGTCAAGCCACCAGACACTTATCTGTATTCCTaGAGTCGCTCCTCGGTCTCCGCTCCGCGCGCCCCT +
Preference number: 6 (lower is better)
Translates to: IHVKPPDTYLYS*SRSSVSAPRAP
Trigger: AGGGGCGCGCGGAGCGGAGACCGAGGAGCGACTTCAGGAATACAGATAAGTGTCTGGTGGCTTGACGTGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367033.4
ENST00000486969.1
CDS TCA 72 bp AGACGGCCCCCGTCCCTTGGTGGACGGTCAAGTGGTTaGAGGTCCAGTCACGATTCTCAGAGTGGAAGGTGC +
Preference number: 6 (lower is better)
Translates to: RRPPSLGGRSSG*RSSHDSQSGRC
Trigger: GCACCTTCCACTCTGAGAATCGTGACTGGACCTTCAACCACTTGACCGTCCACCAAGGGACGGGGGCCGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS TCA 72 bp AGAAGGCCATGTCCCGGAGGATGGGGCTTCCGTCCTTaGGCACAGAGACCATCTCGTACTGGACCCCACCAT +
Preference number: 6 (lower is better)
Translates to: RRPCPGGWGFRP*AQRPSRTGPHH
Trigger: ATGGTGGGGTCCAGTACGAGATGGTCTCTGTGCTCAAGGACGGAAGCCCCATCCTCCGGGACATGGCCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS CCA 72 bp AAGTTATCATCGATGGGGACAGGCGCCTTGGTGCACTaGACGTCCTTCCCCAGCAGCCAGTTGAGCTCCAGG +
Preference number: 6 (lower is better)
Translates to: KLSSMGTGALVH*TSFPSSQLSSR
Trigger: CCTGGAGCTCAACTGGCTGCTGGGGAAGGACGTCCAGTGCACCAAGGCGCCTGTCCCCATCGATGATAACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367033.4
ENST00000460870.1
CDS CCA 72 bp TACACTCGCCAATACACAGGCGTACTGGCCCGGAGGTaGTTCCCACGAGGGCATGGCCCATCTCACAGACAA +
Preference number: 6 (lower is better)
Translates to: YTRQYTGVLARR*FPRGHGPSHRQ
Trigger: TTGTCTGTGAGATGGGCCATGCCCTCGTGGGAACCACCTCCGGGCCAGTACGCCTGTGTATTGGCGAGTGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS CCA 72 bp GCTTGCCATGAGGTCTCCCAAGAGAACAATGGAGCATaGGAGAACGCAGGGCGGGAGTCAGGACACCTGGGT +
Preference number: 6 (lower is better)
Translates to: ACHEVSQENNGA*ENAGRESGHLG
Trigger: ACCCAGGTGTCCTGACTCCCGCCCTGCGTTCTCCCATGCTCCATTGTTCTCTTGGGAGACCTCATGGCAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463510.1
CDS CAA 90 bp CTTATAGACCCGGTTGATGGCCCCCACATAGACGGCCCCCGTCCCTaGGTGGACGGTCAAGTGGTTGAAGGTCCAGTCACGATTCTCAGA +
Preference number: 6 (lower is better)
Translates to: LIDPVDGPHIDGPRP*VDGQVVEGPVTILR
Trigger: TCTGAGAATCGTGACTGGACCTTCAACCACTTGACCGTCCACCAAGGGACGGGGGCCGTCTATGTGGGGGCCATCAACCGGGTCTATAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS CAA 90 bp TGGGCTCGGTCGACACTCACAGAAACAGGGACCGGGCCAAGGCCATaGGATGATGGGGGTGAGACACACACGATCTCACTCATTGACCTC +
Preference number: 6 (lower is better)
Translates to: WARSTLTETGTGPRP*DDGGETHTISLIDL
Trigger: GAGGTCAATGAGTGAGATCGTGTGTGTCTCACCCCCATCATCCAATGGCCTTGGCCCGGTCCCTGTTTCTGTGAGTGTCGACCGAGCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS TCA 72 bp GGGAAGGCACACAGGGCAGAGTCATCGGGCGGGTGGTaGTACTGCTTCTGCCCTTTGGAGAAGATGGCAAAG +
Preference number: 6 (lower is better)
Translates to: GKAHRAESSGGW*YCFCPLEKMAK
Trigger: CTTTGCCATCTTCTCCAAAGGGCAGAAGCAGTATCACCACCCGCCCGATGACTCTGCCCTGTGTGCCTTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367033.4
ENST00000460870.1
CDS TCA 72 bp GCTCAGGCACTCCCCACAAGTCGTATACTGCTCACATaGCTCCACGGGGACCCTGGTGACCTGTCTCTCAGA +
Preference number: 6 (lower is better)
Translates to: AQALPTSRILLT*LHGDPGDLSLR
Trigger: TCTGAGAGACAGGTCACCAGGGTCCCCGTGGAGTCATGTGAGCAGTATACGACTTGTGGGGAGTGCCTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS CCA 72 bp AGGAGACAAAATCGCTGTGTAGCTCATAGTCGAGCATaGCTGAGGACTCAGGGTCTCGGGGCAGCTTCCGGC +
Preference number: 6 (lower is better)
Translates to: RRQNRCVAHSRA*LRTQGLGAASG
Trigger: GCCGGAAGCTGCCCCGAGACCCTGAGTCCTCAGCCATGCTCGACTATGAGCTACACAGCGATTTTGTCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS CCA 72 bp TCGCGCCTTAAGGGTGATTGGCTTTACCTCCCCGACTaGAATCAAGATCTCCTCTGTGGGCACCAGCTGGGG +
Preference number: 6 (lower is better)
Translates to: SRLKGDWLYLPD*NQDLLCGHQLG
Trigger: CCCCAGCTGGTGCCCACAGAGGAGATCTTGATTCCAGTCGGGGAGGTAAAGCCAATCACCCTTAAGGCGCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS CCA 72 bp TGGCCACTGGCAATGCTCCACTCTGGCTCGATGCGCTaGACCCGAGGGTCATCTATGTACTCAAACTGCAGG +
Preference number: 6 (lower is better)
Translates to: WPLAMLHSGSMR*TRGSSMYSNCR
Trigger: CCTGCAGTTTGAGTACATAGATGACCCTCGGGTCCAGCGCATCGAGCCAGAGTGGAGCATTGCCAGTGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS CAA 90 bp ACACTGGCTGATGCTGGCAGCAAATCGATTAGGTTCCCAGGCCTGTaGGCATTTGTCCCTGCGGGAGCACATGTTGTGCAGGGCACACCA +
Preference number: 6 (lower is better)
Translates to: TLADAGSKSIRFPGL*AFVPAGAHVVQGTP
Trigger: TGGTGTGCCCTGCACAACATGTGCTCCCGCAGGGACAAATGCCAACAGGCCTGGGAACCTAATCGATTTGCTGCCAGCATCAGCCAGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS TCA 72 bp TCCTCTAGCCTGGGAGAAGCTGCTGCAGCTGAGAGCTaGCTCATCTCTTCTACCCTCCCCTTCTTCTGGCAG +
Preference number: 6 (lower is better)
Translates to: SSSLGEAAAAES*LISSTLPFFWQ
Trigger: CTGCCAGAAGAAGGGGAGGGTAGAAGAGATGAGTCAGCTCTCAGCTGCAGCAGCTTCTCCCAGGCTAGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483048.1
CDS GCA 72 bp TCTGACATCAGCAATCCCGGCGCTTCCTTCCCTTCTTaGTCTCCGGTTCGTTCACAGTCCCATTTCCTCCGG +
Preference number: 6 (lower is better)
Translates to: SDISNPGASFPS*SPVRSQSHFLR
Trigger: CCGGAGGAAATGGGACTGTGAACGAACCGGAGAGCAAGAAGGGAAGGAAGCGCCGGGATTGCTGATGTCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367033.4
ENST00000486969.1
CDS GCA 72 bp GTGTGTGGCCACTGGCAATGCTCCACTCTGGCTCGATaGGCTGGACCCGAGGGTCATCTATGTACTCAAACT +
Preference number: 6 (lower is better)
Translates to: VCGHWQCSTLAR*AGPEGHLCTQT
Trigger: AGTTTGAGTACATAGATGACCCTCGGGTCCAGCGCATCGAGCCAGAGTGGAGCATTGCCAGTGGCCACACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS GCA 72 bp AGTGTGACAGCTTGGACAGGTCCCTCTTCCCAGGAATaGGAGGCTCCTCCTCTCAGCTCTCAATGGACATGG +
Preference number: 6 (lower is better)
Translates to: SVTAWTGPSSQE*EAPPLSSQWTW
Trigger: CCATGTCCATTGAGAGCTGAGAGGAGGAGCCTCGCATTCCTGGGAAGAGGGACCTGTCCAAGCTGTCACACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367033.4
ENST00000483048.1
CDS CCA 72 bp CTGCGGCTGGGGCAGATTTCGCGCCTTAAGGGTGATTaGCTTTACCTCCCCGACTGGAATCAAGATCTCCTC +
Preference number: 6 (lower is better)
Translates to: LRLGQISRLKGD*LYLPDWNQDLL
Trigger: GAGGAGATCTTGATTCCAGTCGGGGAGGTAAAGCCAATCACCCTTAAGGCGCGAAATCTGCCCCAGCCGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS CAA 72 bp GCAGCAAATCGATTAGGTTCCCAGGCCTGTTGGCATTaGTCCCTGCGGGAGCACATGTTGTGCAGGGCACAC +
Preference number: 6 (lower is better)
Translates to: AANRLGSQACWH*SLREHMLCRAH
Trigger: GTGTGCCCTGCACAACATGTGCTCCCGCAGGGACAAATGCCAACAGGCCTGGGAACCTAATCGATTTGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS CAA 72 bp TCGACACTCACAGAAACAGGGACCGGGCCAAGGCCATaGGATGATGGGGGTGAGACACACACGATCTCACTC +
Preference number: 6 (lower is better)
Translates to: STLTETGTGPRP*DDGGETHTISL
Trigger: GAGTGAGATCGTGTGTGTCTCACCCCCATCATCCAATGGCCTTGGCCCGGTCCCTGTTTCTGTGAGTGTCGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS CAA 90 bp TCGATGCGCTGGACCCGAGGGTCATCTATGTACTCAAACTGCAGGTaGCTATCCACATGGGCTCGGTCGACACTCACAGAAACAGGGACC +
Preference number: 6 (lower is better)
Translates to: SMRWTRGSSMYSNCR*LSTWARSTLTETGT
Trigger: GGTCCCTGTTTCTGTGAGTGTCGACCGAGCCCATGTGGATAGCAACCTGCAGTTTGAGTACATAGATGACCCTCGGGTCCAGCGCATCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS TCA 72 bp AGCGCACAATCACCCCGTACATGGTGCCCGTCTTGTTaGCACTGGACAGGTAGTGCTCCTTCTTGTGGGATG +
Preference number: 6 (lower is better)
Translates to: SAQSPRTWCPSC*HWTGSAPSCGM
Trigger: CATCCCACAAGAAGGAGCACTACCTGTCCAGTGTCAACAAGACGGGCACCATGTACGGGGTGATTGTGCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS TCA 72 bp CACTACCAGGCTAAGCAACCGGCTGTGCTCAGATACTaGGATGCTGCTGGGATGCACTGCAAGGCTCACACA +
Preference number: 6 (lower is better)
Translates to: HYQAKQPAVLRY*DAAGMHCKAHT
Trigger: TGTGTGAGCCTTGCAGTGCATCCCAGCAGCATCTCAGTATCTGAGCACAGCCGGTTGCTTAGCCTGGTAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS GCA 72 bp ATGCGCTGGACCCGAGGGTCATCTATGTACTCAAACTaGAGGTTGCTATCCACATGGGCTCGGTCGACACTC +
Preference number: 6 (lower is better)
Translates to: MRWTRGSSMYSN*RLLSTWARSTL
Trigger: GAGTGTCGACCGAGCCCATGTGGATAGCAACCTGCAGTTTGAGTACATAGATGACCCTCGGGTCCAGCGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS GCA 72 bp GAAAGGCAGAGAAGACTTGAGAATGCATGCGGGCCGTaGCCCTTCTGCTGCCCACTGATATTCTTCCCCATC +
Preference number: 6 (lower is better)
Translates to: ERQRRLENACGP*PFCCPLIFFPI
Trigger: GATGGGGAAGAATATCAGTGGGCAGCAGAAGGGGCACGGCCCGCATGCATTCTCAAGTCTTCTCTGCCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483048.1
CDS CCA 72 bp AGTCATCGGGCGGGTGGTGATACTGCTTCTGCCCTTTaGAGAAGATGGCAAAGAGTACATCGTCCTGGCTGG +
Preference number: 6 (lower is better)
Translates to: SHRAGGDTASAL*RRWQRVHRPGW
Trigger: CCAGCCAGGACGATGTACTCTTTGCCATCTTCTCCAAAGGGCAGAAGCAGTATCACCACCCGCCCGATGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367033.4
ENST00000460870.1
CDS CCA 72 bp ATGCTGGCAGCAAATCGATTAGGTTCCCAGGCCTGTTaGCATTTGTCCCTGCGGGAGCACATGTTGTGCAGG +
Preference number: 6 (lower is better)
Translates to: MLAANRLGSQAC*HLSLREHMLCR
Trigger: CCTGCACAACATGTGCTCCCGCAGGGACAAATGCCAACAGGCCTGGGAACCTAATCGATTTGCTGCCAGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS CCA 72 bp GAGATGCTGCTGGGATGCACTGCAAGGCTCACACACTaGCTGATGCTGGCAGCAAATCGATTAGGTTCCCAG +
Preference number: 6 (lower is better)
Translates to: EMLLGCTARLTH*LMLAANRLGSQ
Trigger: CTGGGAACCTAATCGATTTGCTGCCAGCATCAGCCAGTGTGTGAGCCTTGCAGTGCATCCCAGCAGCATCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS CCA 72 bp GCTGCCTTCTGGGCTTTAACTCTTTTGACTCCTCTGTaGAACCGGTCCTGTCACAGGCTTGTCCTCCAGCCT +
Preference number: 6 (lower is better)
Translates to: AAFWALTLLTPL*NRSCHRLVLQP
Trigger: AGGCTGGAGGACAAGCCTGTGACAGGACCGGTTCCACAGAGGAGTCAAAAGAGTTAAAGCCCAGAAGGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483048.1
CDS CAA 72 bp GATGCTGGCAGCAAATCGATTAGGTTCCCAGGCCTGTaGGCATTTGTCCCTGCGGGAGCACATGTTGTGCAG +
Preference number: 6 (lower is better)
Translates to: DAGSKSIRFPGL*AFVPAGAHVVQ
Trigger: CTGCACAACATGTGCTCCCGCAGGGACAAATGCCAACAGGCCTGGGAACCTAATCGATTTGCTGCCAGCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS CAA 72 bp ACCATAGTGCCTCCTGACTCGGGACCTCGGATTGGGTaGAGTGACAGCACAGAAGGGTTCACGAAGGTGTAC +
Preference number: 6 (lower is better)
Translates to: TIVPPDSGPRIG*SDSTEGFTKVY
Trigger: GTACACCTTCGTGAACCCTTCTGTGCTGTCACTCAACCCAATCCGAGGTCCCGAGTCAGGAGGCACTATGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS TCA 72 bp AGAATGCATGCGGGCCGTGCCCCTTCTGCTGCCCACTaGTATTCTTCCCCATCAAAGGTCAAATTGTCCACC +
Preference number: 6 (lower is better)
Translates to: RMHAGRAPSAAH*YSSPSKVKLST
Trigger: GGTGGACAATTTGACCTTTGATGGGGAAGAATATCAGTGGGCAGCAGAAGGGGCACGGCCCGCATGCATTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483048.1
CDS TCA 72 bp CTAGTCCCACCTTCTCCCCGTGCTGACCTGAGGTCTTaGGTTGTCATTCCCACCATTTCTATCAGTGGTCCC +
Preference number: 6 (lower is better)
Translates to: LVPPSPRADLRS*VVIPTISISGP
Trigger: GGGACCACTGATAGAAATGGTGGGAATGACAACTCAAGACCTCAGGTCAGCACGGGGAGAAGGTGGGACTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486969.1
CDS CCA 72 bp TGCCCTTTGGAGAAGATGGCAAAGAGTACATCGTCCTaGCTGGTGATATTGAAGGCCTGGGCCAGTGAGTCC +
Preference number: 6 (lower is better)
Translates to: CPLEKMAKSTSS*LVILKAWASES
Trigger: GGACTCACTGGCCCAGGCCTTCAATATCACCAGCCAGGACGATGTACTCTTTGCCATCTTCTCCAAAGGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367033.4
ENST00000460870.1
CDS CCA 72 bp GAAGGTGTACTGCTGATGGGACTTCGTCATGAACTCTaGCTTACACTCGCCAATACACAGGCGTACTGGCCC +
Preference number: 6 (lower is better)
Translates to: EGVLLMGLRHEL*LTLANTQAYWP
Trigger: GGGCCAGTACGCCTGTGTATTGGCGAGTGTAAGCCAGAGTTCATGACGAAGTCCCATCAGCAGTACACCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS CAA 72 bp TTGCCGTTCCACACCACAGCGAAATCCACGGCCAGATaGCTGATGTCCATGCCATCATACTGGTACGAGCTG +
Preference number: 6 (lower is better)
Translates to: LPFHTTAKSTAR*LMSMPSYWYEL
Trigger: CAGCTCGTACCAGTATGATGGCATGGACATCAGCAATCTGGCCGTGGATTTCGCTGTGGTGTGGAACGGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS TCA 72 bp CGTTCCACACCACAGCGAAATCCACGGCCAGATTGCTaGTGTCCATGCCATCATACTGGTACGAGCTGTTCT +
Preference number: 6 (lower is better)
Translates to: RSTPQRNPRPDC*CPCHHTGTSCS
Trigger: AGAACAGCTCGTACCAGTATGATGGCATGGACATCAGCAATCTGGCCGTGGATTTCGCTGTGGTGTGGAACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS TCA 72 bp GAGTTGTCATTCCCACCATTTCTATCAGTGGTCCCATaGTTTCAGGCCACCCTCCTCTCATGGCCCTTGGGT +
Preference number: 6 (lower is better)
Translates to: ELSFPPFLSVVP*FQATLLSWPLG
Trigger: ACCCAAGGGCCATGAGAGGAGGGTGGCCTGAAATCATGGGACCACTGATAGAAATGGTGGGAATGACAACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486969.1
CDS GCA 72 bp GGACCCGAGGGTCATCTATGTACTCAAACTGCAGGTTaGTATCCACATGGGCTCGGTCGACACTCACAGAAA +
Preference number: 6 (lower is better)
Translates to: GPEGHLCTQTAG*YPHGLGRHSQK
Trigger: TTTCTGTGAGTGTCGACCGAGCCCATGTGGATAGCAACCTGCAGTTTGAGTACATAGATGACCCTCGGGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS CAA 72 bp TGGACCCGAGGGTCATCTATGTACTCAAACTGCAGGTaGCTATCCACATGGGCTCGGTCGACACTCACAGAA +
Preference number: 6 (lower is better)
Translates to: WTRGSSMYSNCR*LSTWARSTLTE
Trigger: TTCTGTGAGTGTCGACCGAGCCCATGTGGATAGCAACCTGCAGTTTGAGTACATAGATGACCCTCGGGTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS CAA 90 bp AGGGCAGAGGTTTTTGCCCTTCAGAATGATGGGCGATCCTGGCTTTaGATCCAAGACTCCAGTAGGGCTAAGCAGTTCAAAGGTCGGGTT +
Preference number: 6 (lower is better)
Translates to: RAEVFALQNDGRSWL*IQDSSRAKQFKGRV
Trigger: AACCCGACCTTTGAACTGCTTAGCCCTACTGGAGTCTTGGATCAAAAGCCAGGATCGCCCATCATTCTGAAGGGCAAAAACCTCTGCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS TCA 72 bp GGTTCACGAAGGTGTACTGCTGATGGGACTTCGTCATaGACTCTGGCTTACACTCGCCAATACACAGGCGTA +
Preference number: 6 (lower is better)
Translates to: GSRRCTADGTSS*TLAYTRQYTGV
Trigger: TACGCCTGTGTATTGGCGAGTGTAAGCCAGAGTTCATGACGAAGTCCCATCAGCAGTACACCTTCGTGAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS TCA 72 bp AGTGACAGCACAGAAGGGTTCACGAAGGTGTACTGCTaGTGGGACTTCGTCATGAACTCTGGCTTACACTCG +
Preference number: 6 (lower is better)
Translates to: SDSTEGFTKVYC*WDFVMNSGLHS
Trigger: CGAGTGTAAGCCAGAGTTCATGACGAAGTCCCATCAGCAGTACACCTTCGTGAACCCTTCTGTGCTGTCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS TCA 72 bp TCACTGGGATCTCTGGACTGTTCTCGTTGTCAGGGTTaGCGCAGTTCAGGATCAGGGTCTTGTACTCGATCT +
Preference number: 6 (lower is better)
Translates to: SLGSLDCSRCQG*RSSGSGSCTRS
Trigger: AGATCGAGTACAAGACCCTGATCCTGAACTGCGTCAACCCTGACAACGAGAACAGTCCAGAGATCCCAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367033.4
ENST00000463510.1
CDS GCA 72 bp AGACTTGAGAATGCATGCGGGCCGTGCCCCTTCTGCTaGCCACTGATATTCTTCCCCATCAAAGGTCAAATT +
Preference number: 6 (lower is better)
Translates to: RLENACGPCPFC*PLIFFPIKGQI
Trigger: AATTTGACCTTTGATGGGGAAGAATATCAGTGGGCAGCAGAAGGGGCACGGCCCGCATGCATTCTCAAGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483048.1
CDS CCA 72 bp GCAGAGGTTTTTGCCCTTCAGAATGATGGGCGATCCTaGCTTTTGATCCAAGACTCCAGTAGGGCTAAGCAG +
Preference number: 6 (lower is better)
Translates to: AEVFALQNDGRS*LLIQDSSRAKQ
Trigger: CTGCTTAGCCCTACTGGAGTCTTGGATCAAAAGCCAGGATCGCCCATCATTCTGAAGGGCAAAAACCTCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS CCA 72 bp CCAAACTTTCCCAAATGTCTCAGTAGTGCCAGGTCTTaGGGAAGATCTGCTTTACCCAGCCTCAAGCCCTTC +
Preference number: 6 (lower is better)
Translates to: PNFPKCLSSARS*GRSALPSLKPF
Trigger: GAAGGGCTTGAGGCTGGGTAAAGCAGATCTTCCCCAAGACCTGGCACTACTGAGACATTTGGGAAAGTTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483048.1
CDS CCA 72 bp GAGGTCTTGAGTTGTCATTCCCACCATTTCTATCAGTaGTCCCATGATTTCAGGCCACCCTCCTCTCATGGC +
Preference number: 6 (lower is better)
Translates to: EVLSCHSHHFYQ*SHDFRPPSSHG
Trigger: GCCATGAGAGGAGGGTGGCCTGAAATCATGGGACCACTGATAGAAATGGTGGGAATGACAACTCAAGACCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486969.1
CDS CAA 72 bp TTCACTGGGATCTCTGGACTGTTCTCGTTGTCAGGGTaGACGCAGTTCAGGATCAGGGTCTTGTACTCGATC +
Preference number: 6 (lower is better)
Translates to: FTGISGLFSLSG*TQFRIRVLYSI
Trigger: GATCGAGTACAAGACCCTGATCCTGAACTGCGTCAACCCTGACAACGAGAACAGTCCAGAGATCCCAGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367033.4
ENST00000463510.1
CDS CAA 72 bp TTTAACACCTTCACTGGGATCTCTGGACTGTTCTCGTaGTCAGGGTTGACGCAGTTCAGGATCAGGGTCTTG +
Preference number: 6 (lower is better)
Translates to: FNTFTGISGLFS*SGLTQFRIRVL
Trigger: CAAGACCCTGATCCTGAACTGCGTCAACCCTGACAACGAGAACAGTCCAGAGATCCCAGTGAAGGTGTTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367033.4
ENST00000463510.1
CDS TCA 72 bp TCTTTGCCATTGAATTTGACTCGGATCCTTGGCTCCTaGATGACATCCAGGTTGAAGCCTGTGATGGTCAGG +
Preference number: 6 (lower is better)
Translates to: SLPLNLTRILGS*MTSRLKPVMVR
Trigger: CCTGACCATCACAGGCTTCAACCTGGATGTCATTCAGGAGCCAAGGATCCGAGTCAAATTCAATGGCAAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS GCA 72 bp GCTTTACCCAGCCTCAAGCCCTTCCACGATGATTTCTaGCTATCTTCCAAAACACAACAGGATCCCTCACTT +
Preference number: 6 (lower is better)
Translates to: ALPSLKPFHDDF*LSSKTQQDPSL
Trigger: AAGTGAGGGATCCTGTTGTGTTTTGGAAGATAGGCAGAAATCATCGTGGAAGGGCTTGAGGCTGGGTAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483048.1
CDS CCA 72 bp CTGGTAATCTTTCCCTGGACATTTGCTATTGAGGTCTaGTTAAGGAAACTCTCTCCACACCACGATGCCAGG +
Preference number: 6 (lower is better)
Translates to: LVIFPWTFAIEV*LRKLSPHHDAR
Trigger: CCTGGCATCGTGGTGTGGAGAGAGTTTCCTTAACCAGACCTCAATAGCAAATGTCCAGGGAAAGATTACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483048.1
CDS TCA 72 bp TTTTTGCCCTTCAGAATGATGGGCGATCCTGGCTTTTaGTCCAAGACTCCAGTAGGGCTAAGCAGTTCAAAG +
Preference number: 6 (lower is better)
Translates to: FLPFRMMGDPGF*SKTPVGLSSSK
Trigger: CTTTGAACTGCTTAGCCCTACTGGAGTCTTGGATCAAAAGCCAGGATCGCCCATCATTCTGAAGGGCAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS CAA 72 bp GTTTTTGCCCTTCAGAATGATGGGCGATCCTGGCTTTaGATCCAAGACTCCAGTAGGGCTAAGCAGTTCAAA +
Preference number: 6 (lower is better)
Translates to: VFALQNDGRSWL*IQDSSRAKQFK
Trigger: TTTGAACTGCTTAGCCCTACTGGAGTCTTGGATCAAAAGCCAGGATCGCCCATCATTCTGAAGGGCAAAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367033.4
CDS GCA 72 bp TCGGGAATTTATAACCAGAGGAGAATGAGTTTTCTCTaGTCCTTAGACCATAAAGCAAATAAGCCCATTTAC +
Preference number: 6 (lower is better)
Translates to: SGIYNQRRMSFL*SLDHKANKPIY
Trigger: GTAAATGGGCTTATTTGCTTTATGGTCTAAGGAGCAGAGAAAACTCATTCTCCTCTGGTTATAAATTCCCGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483048.1