RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PLPP2 (Homo sapiens)

Ensembl gene IDs: ENSG00000141934

Ensembl transcript IDs: ENST00000269812.7, ENST00000327790.7, ENST00000434325.7, ENST00000586998.3, ENST00000589672.2, ENST00000591572.2, ENST00000621795.1, ENST00000633125.1

Found 190 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCTCCCATCAGCCCAGGGTTCCTGGAGCCCGTCCAGAGCCCTCAGTaGCTAACCAGGGCTGGAGGGACCACCTGGGTGGGCCTCAGCTGG +
Preference number: 1 (lower is better)
Translates to: APISPGFLEPVQSPQ*LTRAGGTTWVGLSW
Trigger: CCAGCTGAGGCCCACCCAGGTGGTCCCTCCAGCCCTGGTTAGGCACTGAGGGCTCTGGACGGGCTCCAGGAACCCTGGGCTGATGGGAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
3UTR GCA 90 bp CCAAATGCTGAGGGCTACCCAGGCATCTCCAGACTCCTGGTCCAGTaGAGGGCAGGGGGCAGCGGAGCCCGCTCACTGCTCCCATCAGCC +
Preference number: 1 (lower is better)
Translates to: PNAEGYPGISRLLVQ*RAGGSGARSLLPSA
Trigger: GGCTGATGGGAGCAGTGAGCGGGCTCCGCTGCCCCCTGCCCTGCACTGGACCAGGAGTCTGGAGATGCCTGGGTAGCCCTCAGCATTTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
3UTR CCA 90 bp AGGGTTCCTGGAGCCCGTCCAGAGCCCTCAGTGCCTAACCAGGGCTaGAGGGACCACCTGGGTGGGCCTCAGCTGGACTCACAGCAGCTC +
Preference number: 1 (lower is better)
Translates to: RVPGARPEPSVPNQG*RDHLGGPQLDSQQL
Trigger: GAGCTGCTGTGAGTCCAGCTGAGGCCCACCCAGGTGGTCCCTCCAGCCCTGGTTAGGCACTGAGGGCTCTGGACGGGCTCCAGGAACCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
3UTR CCA 90 bp GTCCCAGGGAGGACTGACAGGGAGGAGGCCCAAGGAAGGACTCAGTaGGGCAAGGGTACCCAGGGCAGCACTAGGGTTGGCTGGGGAGTG +
Preference number: 1 (lower is better)
Translates to: VPGRTDREEAQGRTQ*GKGTQGSTRVGWGV
Trigger: CACTCCCCAGCCAACCCTAGTGCTGCCCTGGGTACCCTTGCCCCACTGAGTCCTTCCTTGGGCCTCCTCCCTGTCAGTCCTCCCTGGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586998.3
3UTR-3UTR CCA 90 bp CAGGGCAGGGGGCAGCGGAGCCCGCTCACTGCTCCCATCAGCCCAGGGTTCCTGGTGCCTAACCAGGGCTaGAGGGACCACCTGGGTGGG +
Preference number: 2 (lower is better)
Translates to: QGRGQRSPLTAPISPGFLVPNQG*RDHLGG
Trigger: CCCACCCAGGTGGTCCCTCCAGCCCTGGTTAGGCAC...CAGGAACCCTGGGCTGATGGGAGCAGTGAGCGGGCTCCGCTGCCCCCTGCCCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
3UTR-3UTR GCA 90 bp CAGGGCAGGGGGCAGCGGAGCCCGCTCACTGCTCCCATCAGCCCAGGGTTCCTGGTCCAGAGCCCTCAGTaGCTAACCAGGGCTGGAGGG +
Preference number: 2 (lower is better)
Translates to: QGRGQRSPLTAPISPGFLVQSPQ*LTRAGG
Trigger: CCCTCCAGCCCTGGTTAGGCACTGAGGGCTCTGGAC...CAGGAACCCTGGGCTGATGGGAGCAGTGAGCGGGCTCCGCTGCCCCCTGCCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
3UTR-3UTR CCA 90 bp GCGGAGCCCGCTCACTGCTCCCATCAGCCCAGGGTTCCTGGAGCCCGTCCAGAGGTGCCTAACCAGGGCTaGAGGGACCACCTGGGTGGG +
Preference number: 2 (lower is better)
Translates to: AEPAHCSHQPRVPGARPEVPNQG*RDHLGG
Trigger: CCCACCCAGGTGGTCCCTCCAGCCCTGGTTAGGCAC...CTCTGGACGGGCTCCAGGAACCCTGGGCTGATGGGAGCAGTGAGCGGGCTCCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
3UTR-3UTR CCA 90 bp CGGAGCCCGCTCACTGCTCCCATCAGCCCAGGGTTCCTGGAGCCCGTCCAGAGCTGGGTGGGCCTCAGCTaGACTCACAGCAGCTCCCTG +
Preference number: 2 (lower is better)
Translates to: RSPLTAPISPGFLEPVQSWVGLS*THSSSL
Trigger: CAGGGAGCTGCTGTGAGTCCAGCTGAGGCCCACCCA...GCTCTGGACGGGCTCCAGGAACCCTGGGCTGATGGGAGCAGTGAGCGGGCTCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
3UTR-3UTR CCA 90 bp CAGCCCAGGGTTCCTGGAGCCCGTCCAGAGCCCTCAGTGCCTAACCAGGGCTGGTGGGTGGGCCTCAGCTaGACTCACAGCAGCTCCCTG +
Preference number: 2 (lower is better)
Translates to: QPRVPGARPEPSVPNQGWWVGLS*THSSSL
Trigger: CAGGGAGCTGCTGTGAGTCCAGCTGAGGCCCACCCA...CCAGCCCTGGTTAGGCACTGAGGGCTCTGGACGGGCTCCAGGAACCCTGGGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
3UTR-3UTR GCA 90 bp CGGGAACAGGTTCCCCTCCAAATGCTGAGGGCTACCCAGGCATCTCCAGACTCCGCGGAGCCCGCTCACTaGTCCCATCAGCCCAGGGTT +
Preference number: 2 (lower is better)
Translates to: REQVPLQMLRATQASPDSAEPAH*SHQPRV
Trigger: AACCCTGGGCTGATGGGAGCAGTGAGCGGGCTCCGC...GGAGTCTGGAGATGCCTGGGTAGCCCTCAGCATTTGGAGGGGAACCTGTTCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
3UTR-3UTR CCA 90 bp CGACGGGAACAGGTTCCCCTCCAAATGCTGAGGGCTACCCAGGCATCTCCAGACGCTGGAGGGACCACCTaGGTGGGCCTCAGCTGGACT +
Preference number: 2 (lower is better)
Translates to: RREQVPLQMLRATQASPDAGGTT*VGLSWT
Trigger: AGTCCAGCTGAGGCCCACCCAGGTGGTCCCTCCAGC...GTCTGGAGATGCCTGGGTAGCCCTCAGCATTTGGAGGGGAACCTGTTCCCGTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
3UTR-3UTR CCA 90 bp CCAAATGCTGAGGGCTACCCAGGCATCTCCAGACTCCTGGTCCAGTGCAGGGCAGCTGGAGGGACCACCTaGGTGGGCCTCAGCTGGACT +
Preference number: 2 (lower is better)
Translates to: PNAEGYPGISRLLVQCRAAGGTT*VGLSWT
Trigger: AGTCCAGCTGAGGCCCACCCAGGTGGTCCCTCCAGC...TGCCCTGCACTGGACCAGGAGTCTGGAGATGCCTGGGTAGCCCTCAGCATTTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
3UTR-3UTR CCA 90 bp CTCCAAATGCTGAGGGCTACCCAGGCATCTCCAGACTCCTGGTCCAGTGCAGGGGTGCCTAACCAGGGCTaGAGGGACCACCTGGGTGGG +
Preference number: 2 (lower is better)
Translates to: LQMLRATQASPDSWSSAGVPNQG*RDHLGG
Trigger: CCCACCCAGGTGGTCCCTCCAGCCCTGGTTAGGCAC...CCCTGCACTGGACCAGGAGTCTGGAGATGCCTGGGTAGCCCTCAGCATTTGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
3UTR-3UTR GCA 90 bp CAGGTTCCCCTCCAAATGCTGAGGGCTACCCAGGCATCTCCAGACTCCTGGTCCGTCCAGAGCCCTCAGTaGCTAACCAGGGCTGGAGGG +
Preference number: 2 (lower is better)
Translates to: QVPLQMLRATQASPDSWSVQSPQ*LTRAGG
Trigger: CCCTCCAGCCCTGGTTAGGCACTGAGGGCTCTGGAC...GGACCAGGAGTCTGGAGATGCCTGGGTAGCCCTCAGCATTTGGAGGGGAACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
3UTR-3UTR CCA 90 bp CTCCAAATGCTGAGGGCTACCCAGGCATCTCCAGACTCCTGGTCCAGTGCAGGGTGGGTGGGCCTCAGCTaGACTCACAGCAGCTCCCTG +
Preference number: 2 (lower is better)
Translates to: LQMLRATQASPDSWSSAGWVGLS*THSSSL
Trigger: CAGGGAGCTGCTGTGAGTCCAGCTGAGGCCCACCCA...CCCTGCACTGGACCAGGAGTCTGGAGATGCCTGGGTAGCCCTCAGCATTTGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
3UTR-3UTR CCA 90 bp CTCCAAATGCTGAGGGCTACCCAGGCATCTCCAGACTCCTGGTCCAGTGCAGGGGAGGGACCACCTGGGTaGGCCTCAGCTGGACTCACA +
Preference number: 2 (lower is better)
Translates to: LQMLRATQASPDSWSSAGEGPPG*ASAGLT
Trigger: TGTGAGTCCAGCTGAGGCCCACCCAGGTGGTCCCTC...CCCTGCACTGGACCAGGAGTCTGGAGATGCCTGGGTAGCCCTCAGCATTTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
3UTR-3UTR CCA 90 bp CGACGGGAACAGGTTCCCCTCCAAATGCTGAGGGCTACCCAGGCATCTCCAGACGAGGGACCACCTGGGTaGGCCTCAGCTGGACTCACA +
Preference number: 2 (lower is better)
Translates to: RREQVPLQMLRATQASPDEGPPG*ASAGLT
Trigger: TGTGAGTCCAGCTGAGGCCCACCCAGGTGGTCCCTC...GTCTGGAGATGCCTGGGTAGCCCTCAGCATTTGGAGGGGAACCTGTTCCCGTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
3UTR GCA 72 bp AGCCCAGGGTTCCTGGAGCCCGTCCAGAGCCCTCAGTaGCTAACCAGGGCTGGAGGGACCACCTGGGTGGGC +
Preference number: 3 (lower is better)
Translates to: SPGFLEPVQSPQ*LTRAGGTTWVG
Trigger: GCCCACCCAGGTGGTCCCTCCAGCCCTGGTTAGGCACTGAGGGCTCTGGACGGGCTCCAGGAACCCTGGGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
3UTR CCA 72 bp GGAGCCCGTCCAGAGCCCTCAGTGCCTAACCAGGGCTaGAGGGACCACCTGGGTGGGCCTCAGCTGGACTCA +
Preference number: 3 (lower is better)
Translates to: GARPEPSVPNQG*RDHLGGPQLDS
Trigger: TGAGTCCAGCTGAGGCCCACCCAGGTGGTCCCTCCAGCCCTGGTTAGGCACTGAGGGCTCTGGACGGGCTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
3UTR CCA 72 bp AGGACTGACAGGGAGGAGGCCCAAGGAAGGACTCAGTaGGGCAAGGGTACCCAGGGCAGCACTAGGGTTGGC +
Preference number: 3 (lower is better)
Translates to: RTDREEAQGRTQ*GKGTQGSTRVG
Trigger: GCCAACCCTAGTGCTGCCCTGGGTACCCTTGCCCCACTGAGTCCTTCCTTGGGCCTCCTCCCTGTCAGTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586998.3
CDS-3UTR CCA 90 bp CAGGGCAGGGGGCAGCGGAGCCCGCTCACTGCTCCCATCAGCCCAGGGTTCCTGCAGCAGCTCCCTGCCTaGGCGGGGTCCGGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: QGRGQRSPLTAPISPGFLQQLPA*AGSGLR
Trigger: CCTGAGGCCGGACCCCGCCCAGGCAGGGAGCTGCTG...CAGGAACCCTGGGCTGATGGGAGCAGTGAGCGGGCTCCGCTGCCCCCTGCCCTG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
CDS-3UTR GCA 90 bp AGTGCAGGGCAGGGGGCAGCGGAGCCCGCTCACTGCTCCCATCAGCCCAGGGTTGCAGGGAGGCTCCGCTaGATGGTCCCCGCGACCCCC +
Preference number: 4 (lower is better)
Translates to: SAGQGAAEPAHCSHQPRVAGRLR*MVPATP
Trigger: GGGGGTCGCGGGGACCATGCAGCGGAGCCTCCCTGC...AACCCTGGGCTGATGGGAGCAGTGAGCGGGCTCCGCTGCCCCCTGCCCTGCACT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269812.7
CDS-3UTR CCA 90 bp GCGGAGCCCGCTCACTGCTCCCATCAGCCCAGGGTTCCTGGAGCCCGTCCAGAGGGAGGCTCCGCTGCATaGTCCCCGCGACCCCCGACG +
Preference number: 4 (lower is better)
Translates to: AEPAHCSHQPRVPGARPEGGSAA*SPRPPT
Trigger: CGTCGGGGGTCGCGGGGACCATGCAGCGGAGCCTCC...CTCTGGACGGGCTCCAGGAACCCTGGGCTGATGGGAGCAGTGAGCGGGCTCCGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269812.7
CDS-3UTR CCA 90 bp AGTGCAGGGCAGGGGGCAGCGGAGCCCGCTCACTGCTCCCATCAGCCCAGGGTTCAGCAGCTCCCTGCCTaGGCGGGGTCCGGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: SAGQGAAEPAHCSHQPRVQQLPA*AGSGLR
Trigger: CCTGAGGCCGGACCCCGCCCAGGCAGGGAGCTGCTG...AACCCTGGGCTGATGGGAGCAGTGAGCGGGCTCCGCTGCCCCCTGCCCTGCACT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
CDS-3UTR CCA 90 bp GCAGCGGAGCCCGCTCACTGCTCCCATCAGCCCAGGGTTCCTGGAGCCCGTCCACAGCAGCTCCCTGCCTaGGCGGGGTCCGGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: AAEPAHCSHQPRVPGARPQQLPA*AGSGLR
Trigger: CCTGAGGCCGGACCCCGCCCAGGCAGGGAGCTGCTG...TGGACGGGCTCCAGGAACCCTGGGCTGATGGGAGCAGTGAGCGGGCTCCGCTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
CDS-3UTR GCA 90 bp GGCAGGGGGCAGCGGAGCCCGCTCACTGCTCCCATCAGCCCAGGGTTCCTGGAGGAGGGCAGCCACCAGTaGCCCCTGCAGGAGGCCAAC +
Preference number: 4 (lower is better)
Translates to: GRGQRSPLTAPISPGFLEEGSHQ*PLQEAN
Trigger: GTTGGCCTCCTGCAGGGGGCACTGGTGGCTGCCCTC...CTCCAGGAACCCTGGGCTGATGGGAGCAGTGAGCGGGCTCCGCTGCCCCCTGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
CDS-3UTR GCA 90 bp GCGGAGCCCGCTCACTGCTCCCATCAGCCCAGGGTTCCTGGAGCCCGTCCAGAGGCACAGACTTCCTGCTaGCGGGGCGGGGGATGCTGG +
Preference number: 4 (lower is better)
Translates to: AEPAHCSHQPRVPGARPEAQTSC*RGGGCW
Trigger: CCAGCATCCCCCGCCCCGGCAGCAGGAAGTCTGTGC...CTCTGGACGGGCTCCAGGAACCCTGGGCTGATGGGAGCAGTGAGCGGGCTCCGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327790.7
CDS-3UTR GCA 90 bp GCGGAGCCCGCTCACTGCTCCCATCAGCCCAGGGTTCCTGGAGCCCGTCCAGAGAAGACCCACCTCCGCTaGATGGTCCCCGCGACCCCC +
Preference number: 4 (lower is better)
Translates to: AEPAHCSHQPRVPGARPEKTHLR*MVPATP
Trigger: GGGGGTCGCGGGGACCATGCAGCGGAGGTGGGTCTT...CTCTGGACGGGCTCCAGGAACCCTGGGCTGATGGGAGCAGTGAGCGGGCTCCGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434325.7
CDS-3UTR CCA 90 bp GGCAGGGGGCAGCGGAGCCCGCTCACTGCTCCCATCAGCCCAGGGTTCCTGGAGGCTGGAGGGACCACCTaGGTGGGCCTCAGCTGGACT +
Preference number: 4 (lower is better)
Translates to: GRGQRSPLTAPISPGFLEAGGTT*VGLSWT
Trigger: AGTCCAGCTGAGGCCCACCCAGGTGGTCCCTCCAGC...CTCCAGGAACCCTGGGCTGATGGGAGCAGTGAGCGGGCTCCGCTGCCCCCTGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
CDS-3UTR GCA 90 bp GTGCAGGGCAGGGGGCAGCGGAGCCCGCTCACTGCTCCCATCAGCCCAGGGTTCGTCCAGAGCCCTCAGTaGCTAACCAGGGCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: VQGRGQRSPLTAPISPGFVQSPQ*LTRAGG
Trigger: CCCTCCAGCCCTGGTTAGGCACTGAGGGCTCTGGAC...GAACCCTGGGCTGATGGGAGCAGTGAGCGGGCTCCGCTGCCCCCTGCCCTGCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
CDS-3UTR GCA 90 bp CGGAGCCCGCTCACTGCTCCCATCAGCCCAGGGTTCCTGGAGCCCGTCCAGAGCGCGGAGCCCGCTCACTaGTCCCATCAGCCCAGGGTT +
Preference number: 4 (lower is better)
Translates to: RSPLTAPISPGFLEPVQSAEPAH*SHQPRV
Trigger: AACCCTGGGCTGATGGGAGCAGTGAGCGGGCTCCGC...GCTCTGGACGGGCTCCAGGAACCCTGGGCTGATGGGAGCAGTGAGCGGGCTCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
CDS-3UTR CCA 90 bp CAGGGCAGGGGGCAGCGGAGCCCGCTCACTGCTCCCATCAGCCCAGGGTTCCTGGAGGGACCACCTGGGTaGGCCTCAGCTGGACTCACA +
Preference number: 4 (lower is better)
Translates to: QGRGQRSPLTAPISPGFLEGPPG*ASAGLT
Trigger: TGTGAGTCCAGCTGAGGCCCACCCAGGTGGTCCCTC...CAGGAACCCTGGGCTGATGGGAGCAGTGAGCGGGCTCCGCTGCCCCCTGCCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
CDS-3UTR CCA 90 bp GTGCAGGGCAGGGGGCAGCGGAGCCCGCTCACTGCTCCCATCAGCCCAGGGTTCGCATCTCCAGACTCCTaGTCCAGTGCAGGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: VQGRGQRSPLTAPISPGFASPDS*SSAGQG
Trigger: CCCCTGCCCTGCACTGGACCAGGAGTCTGGAGATGC...GAACCCTGGGCTGATGGGAGCAGTGAGCGGGCTCCGCTGCCCCCTGCCCTGCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
CDS-3UTR CCA 90 bp CAGGGCAGGGGGCAGCGGAGCCCGCTCACTGCTCCCATCAGCCCAGGGTTCCTGGCATCTCCAGACTCCTaGTCCAGTGCAGGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: QGRGQRSPLTAPISPGFLASPDS*SSAGQG
Trigger: CCCCTGCCCTGCACTGGACCAGGAGTCTGGAGATGC...CAGGAACCCTGGGCTGATGGGAGCAGTGAGCGGGCTCCGCTGCCCCCTGCCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
CDS-3UTR CCA 90 bp CGCTCACTGCTCCCATCAGCCCAGGGTTCCTGGAGCCCGTCCAGAGCCCTCAGTGCGCGGAGGGAGGTCTaGTCCTCACGCGAGGTCCCC +
Preference number: 4 (lower is better)
Translates to: RSLLPSAQGSWSPSRALSARREV*SSREVP
Trigger: GGGGACCTCGCGTGAGGACCAGACCTCCCTCCGCGC...ACTGAGGGCTCTGGACGGGCTCCAGGAACCCTGGGCTGATGGGAGCAGTGAGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327790.7
CDS-3UTR TCA 90 bp CGGAGCCCGCTCACTGCTCCCATCAGCCCAGGGTTCCTGGAGCCCGTCCAGAGCCATAGACCGAGCAGTTaGCCCGGCTCCAGTCGGGGT +
Preference number: 4 (lower is better)
Translates to: RSPLTAPISPGFLEPVQSHRPSS*PGSSRG
Trigger: ACCCCGACTGGAGCCGGGTCAACTGCTCGGTCTATG...GCTCTGGACGGGCTCCAGGAACCCTGGGCTGATGGGAGCAGTGAGCGGGCTCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
CDS-3UTR TCA 90 bp CAGGGCAGGGGGCAGCGGAGCCCGCTCACTGCTCCCATCAGCCCAGGGTTCCTGACAACCTGGCCTCGGTaGCATCAGCAGGGTTTCCCC +
Preference number: 4 (lower is better)
Translates to: QGRGQRSPLTAPISPGFLTTWPR*HQQGFP
Trigger: GGGGAAACCCTGCTGATGTCACCGAGGCCAGGTTGT...CAGGAACCCTGGGCTGATGGGAGCAGTGAGCGGGCTCCGCTGCCCCCTGCCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
CDS-3UTR TCA 90 bp GGCAGGGGGCAGCGGAGCCCGCTCACTGCTCCCATCAGCCCAGGGTTCCTGGAGACAACCTGGCCTCGGTaGCATCAGCAGGGTTTCCCC +
Preference number: 4 (lower is better)
Translates to: GRGQRSPLTAPISPGFLETTWPR*HQQGFP
Trigger: GGGGAAACCCTGCTGATGTCACCGAGGCCAGGTTGT...CTCCAGGAACCCTGGGCTGATGGGAGCAGTGAGCGGGCTCCGCTGCCCCCTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
CDS-3UTR TCA 90 bp GTGCAGGGCAGGGGGCAGCGGAGCCCGCTCACTGCTCCCATCAGCCCAGGGTTCCAGGGTCAACGTCAGTaGCAGGCTGGGCTTCCGTTC +
Preference number: 4 (lower is better)
Translates to: VQGRGQRSPLTAPISPGFQGQRQ*QAGLPF
Trigger: GAACGGAAGCCCAGCCTGTCACTGACGTTGACCCTG...GAACCCTGGGCTGATGGGAGCAGTGAGCGGGCTCCGCTGCCCCCTGCCCTGCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
CDS-3UTR GCA 90 bp GCAGCGGAGCCCGCTCACTGCTCCCATCAGCCCAGGGTTCCTGGAGCCCGTCCAGGGTCGCAGCAGCCGTaGCCACTTCCAACAGAGTCG +
Preference number: 4 (lower is better)
Translates to: AAEPAHCSHQPRVPGARPGSQQP*PLPTES
Trigger: CGACTCTGTTGGAAGTGGGCACGGCTGCTGCGACCC...TGGACGGGCTCCAGGAACCCTGGGCTGATGGGAGCAGTGAGCGGGCTCCGCTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
CDS-3UTR GCA 90 bp CGGAGCCCGCTCACTGCTCCCATCAGCCCAGGGTTCCTGGAGCCCGTCCAGAGCGGGTCGCAGCAGCCGTaGCCACTTCCAACAGAGTCG +
Preference number: 4 (lower is better)
Translates to: RSPLTAPISPGFLEPVQSGSQQP*PLPTES
Trigger: CGACTCTGTTGGAAGTGGGCACGGCTGCTGCGACCC...GCTCTGGACGGGCTCCAGGAACCCTGGGCTGATGGGAGCAGTGAGCGGGCTCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
CDS-3UTR GCA 90 bp GCAGCGGAGCCCGCTCACTGCTCCCATCAGCCCAGGGTTCCTGGAGCCCGTCCAGTCCAGAGCCCTCAGTaGCTAACCAGGGCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: AAEPAHCSHQPRVPGARPVQSPQ*LTRAGG
Trigger: CCCTCCAGCCCTGGTTAGGCACTGAGGGCTCTGGAC...TGGACGGGCTCCAGGAACCCTGGGCTGATGGGAGCAGTGAGCGGGCTCCGCTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
CDS-3UTR CCA 90 bp GTGCAGGGCAGGGGGCAGCGGAGCCCGCTCACTGCTCCCATCAGCCCAGGGTTCCCAGCCATGAGCCCGTaGGTGATGGTATCTGGACGG +
Preference number: 4 (lower is better)
Translates to: VQGRGQRSPLTAPISPGFPAMSP*VMVSGR
Trigger: CCGTCCAGATACCATCACCCACGGGCTCATGGCTGG...GAACCCTGGGCTGATGGGAGCAGTGAGCGGGCTCCGCTGCCCCCTGCCCTGCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
CDS-3UTR CCA 90 bp AGTGCAGGGCAGGGGGCAGCGGAGCCCGCTCACTGCTCCCATCAGCCCAGGGTTGGAAGAACTGGACTGTaGGTCGCAGCAGCCGTGCCC +
Preference number: 4 (lower is better)
Translates to: SAGQGAAEPAHCSHQPRVGRTGL*VAAAVP
Trigger: GGGCACGGCTGCTGCGACCCACAGTCCAGTTCTTCC...AACCCTGGGCTGATGGGAGCAGTGAGCGGGCTCCGCTGCCCCCTGCCCTGCACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
CDS-3UTR TCA 90 bp CGGAGCCCGCTCACTGCTCCCATCAGCCCAGGGTTCCTGGAGCCCGTCCAGAGCAGATGTAGCAGACAGTaGGGGCAGCCACCAGTGCCC +
Preference number: 4 (lower is better)
Translates to: RSPLTAPISPGFLEPVQSRCSRQ*GQPPVP
Trigger: GGGCACTGGTGGCTGCCCTCACTGTCTGCTACATCT...GCTCTGGACGGGCTCCAGGAACCCTGGGCTGATGGGAGCAGTGAGCGGGCTCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
CDS-3UTR TCA 90 bp GGCAGGGGGCAGCGGAGCCCGCTCACTGCTCCCATCAGCCCAGGGTTCCTGGAGTTCCCCTCCAAATGCTaGGGGCTACCCAGGCATCTC +
Preference number: 4 (lower is better)
Translates to: GRGQRSPLTAPISPGFLEFPSKC*GLPRHL
Trigger: GAGATGCCTGGGTAGCCCTCAGCATTTGGAGGGGAA...CTCCAGGAACCCTGGGCTGATGGGAGCAGTGAGCGGGCTCCGCTGCCCCCTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
CDS-3UTR CCA 90 bp GCGGAGCCCGCTCACTGCTCCCATCAGCCCAGGGTTCCTGGAGCCCGTCCAGAGCCAGCCATGAGCCCGTaGGTGATGGTATCTGGACGG +
Preference number: 4 (lower is better)
Translates to: AEPAHCSHQPRVPGARPEPAMSP*VMVSGR
Trigger: CCGTCCAGATACCATCACCCACGGGCTCATGGCTGG...CTCTGGACGGGCTCCAGGAACCCTGGGCTGATGGGAGCAGTGAGCGGGCTCCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
CDS-3UTR CCA 90 bp CAGGGCAGGGGGCAGCGGAGCCCGCTCACTGCTCCCATCAGCCCAGGGTTCCTGAGGTCTGTCAGAGACTaGCTCACGGCAGCCCCAAAC +
Preference number: 4 (lower is better)
Translates to: QGRGQRSPLTAPISPGFLRSVRD*LTAAPN
Trigger: GTTTGGGGCTGCCGTGAGCCAGTCTCTGACAGACCT...CAGGAACCCTGGGCTGATGGGAGCAGTGAGCGGGCTCCGCTGCCCCCTGCCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
CDS-3UTR CCA 90 bp CAGCCCAGGGTTCCTGGAGCCCGTCCAGAGCCCTCAGTGCCTAACCAGGGCTGGGGAAGAACTGGACTGTaGGTCGCAGCAGCCGTGCCC +
Preference number: 4 (lower is better)
Translates to: QPRVPGARPEPSVPNQGWGRTGL*VAAAVP
Trigger: GGGCACGGCTGCTGCGACCCACAGTCCAGTTCTTCC...CCAGCCCTGGTTAGGCACTGAGGGCTCTGGACGGGCTCCAGGAACCCTGGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
CDS-3UTR CCA 90 bp GCGGAGCCCGCTCACTGCTCCCATCAGCCCAGGGTTCCTGGAGCCCGTCCAGAGGCCACCAGGAAGAACTaGACTGTGGGTCGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: AEPAHCSHQPRVPGARPEATRKN*TVGRSS
Trigger: GCTGCTGCGACCCACAGTCCAGTTCTTCCTGGTGGC...CTCTGGACGGGCTCCAGGAACCCTGGGCTGATGGGAGCAGTGAGCGGGCTCCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
CDS-3UTR CCA 90 bp CAGGGCAGGGGGCAGCGGAGCCCGCTCACTGCTCCCATCAGCCCAGGGTTCCTGACGTCAGTGACAGGCTaGGCTTCCGTTCCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: QGRGQRSPLTAPISPGFLTSVTG*ASVPAP
Trigger: AGGAGCTGGAACGGAAGCCCAGCCTGTCACTGACGT...CAGGAACCCTGGGCTGATGGGAGCAGTGAGCGGGCTCCGCTGCCCCCTGCCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
CDS-3UTR CCA 90 bp CAGGTTCCCCTCCAAATGCTGAGGGCTACCCAGGCATCTCCAGACTCCTGGTCCCCCACCTCCGCTGCATaGTCCCCGCGACCCCCGACG +
Preference number: 4 (lower is better)
Translates to: QVPLQMLRATQASPDSWSPTSAA*SPRPPT
Trigger: CGTCGGGGGTCGCGGGGACCATGCAGCGGAGGTGGG...GGACCAGGAGTCTGGAGATGCCTGGGTAGCCCTCAGCATTTGGAGGGGAACCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000434325.7
CDS-3UTR TCA 90 bp GTGCAGGGCAGGGGGCAGCGGAGCCCGCTCACTGCTCCCATCAGCCCAGGGTTCGTGGGGGTCGGGCTTTaGAGAAGTCTGAGATGTAGC +
Preference number: 4 (lower is better)
Translates to: VQGRGQRSPLTAPISPGFVGVGL*RSLRCS
Trigger: GCTACATCTCAGACTTCTTCAAAGCCCGACCCCCAC...GAACCCTGGGCTGATGGGAGCAGTGAGCGGGCTCCGCTGCCCCCTGCCCTGCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
CDS-3UTR TCA 90 bp CAGCCCAGGGTTCCTGGAGCCCGTCCAGAGCCCTCAGTGCCTAACCAGGGCTGGCAGGGTCAACGTCAGTaGCAGGCTGGGCTTCCGTTC +
Preference number: 4 (lower is better)
Translates to: QPRVPGARPEPSVPNQGWQGQRQ*QAGLPF
Trigger: GAACGGAAGCCCAGCCTGTCACTGACGTTGACCCTG...CCAGCCCTGGTTAGGCACTGAGGGCTCTGGACGGGCTCCAGGAACCCTGGGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
CDS-3UTR TCA 90 bp CGGAGCCCGCTCACTGCTCCCATCAGCCCAGGGTTCCTGGAGCCCGTCCAGAGCTTCCCCTCCAAATGCTaGGGGCTACCCAGGCATCTC +
Preference number: 4 (lower is better)
Translates to: RSPLTAPISPGFLEPVQSFPSKC*GLPRHL
Trigger: GAGATGCCTGGGTAGCCCTCAGCATTTGGAGGGGAA...GCTCTGGACGGGCTCCAGGAACCCTGGGCTGATGGGAGCAGTGAGCGGGCTCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
CDS-3UTR GCA 90 bp CGCTCACTGCTCCCATCAGCCCAGGGTTCCTGGAGCCCGTCCAGAGCCCTCAGTGGGTCGCAGCAGCCGTaGCCACTTCCAACAGAGTCG +
Preference number: 4 (lower is better)
Translates to: RSLLPSAQGSWSPSRALSGSQQP*PLPTES
Trigger: CGACTCTGTTGGAAGTGGGCACGGCTGCTGCGACCC...ACTGAGGGCTCTGGACGGGCTCCAGGAACCCTGGGCTGATGGGAGCAGTGAGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
CDS-3UTR GCA 90 bp GGCAAGGGTACCCAGGGCAGCACTAGGGTTGGCTGGGGAGTGGTCTCTGGACAAGAGGGCAGCCACCAGTaGCCCCTGCAGGAGGCCAAC +
Preference number: 4 (lower is better)
Translates to: GKGTQGSTRVGWGVVSGQEGSHQ*PLQEAN
Trigger: GTTGGCCTCCTGCAGGGGGCACTGGTGGCTGCCCTC...TTGTCCAGAGACCACTCCCCAGCCAACCCTAGTGCTGCCCTGGGTACCCTTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586998.3
CDS-3UTR CCA 90 bp CAGGGCAGGGGGCAGCGGAGCCCGCTCACTGCTCCCATCAGCCCAGGGTTCCTGGTGGGTGATGGTATCTaGACGGTAGGGGTACCGGAT +
Preference number: 4 (lower is better)
Translates to: QGRGQRSPLTAPISPGFLVGDGI*TVGVPD
Trigger: ATCCGGTACCCCTACCGTCCAGATACCATCACCCAC...CAGGAACCCTGGGCTGATGGGAGCAGTGAGCGGGCTCCGCTGCCCCCTGCCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
CDS-3UTR CCA 90 bp AGTGCAGGGCAGGGGGCAGCGGAGCCCGCTCACTGCTCCCATCAGCCCAGGGTTAGGTCTGTCAGAGACTaGCTCACGGCAGCCCCAAAC +
Preference number: 4 (lower is better)
Translates to: SAGQGAAEPAHCSHQPRVRSVRD*LTAAPN
Trigger: GTTTGGGGCTGCCGTGAGCCAGTCTCTGACAGACCT...AACCCTGGGCTGATGGGAGCAGTGAGCGGGCTCCGCTGCCCCCTGCCCTGCACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
CDS-3UTR CCA 90 bp CGCTCACTGCTCCCATCAGCCCAGGGTTCCTGGAGCCCGTCCAGAGCCCTCAGTGGAAGAACTGGACTGTaGGTCGCAGCAGCCGTGCCC +
Preference number: 4 (lower is better)
Translates to: RSLLPSAQGSWSPSRALSGRTGL*VAAAVP
Trigger: GGGCACGGCTGCTGCGACCCACAGTCCAGTTCTTCC...ACTGAGGGCTCTGGACGGGCTCCAGGAACCCTGGGCTGATGGGAGCAGTGAGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
CDS-3UTR CCA 90 bp AGTGCAGGGCAGGGGGCAGCGGAGCCCGCTCACTGCTCCCATCAGCCCAGGGTTACGTCAGTGACAGGCTaGGCTTCCGTTCCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: SAGQGAAEPAHCSHQPRVTSVTG*ASVPAP
Trigger: AGGAGCTGGAACGGAAGCCCAGCCTGTCACTGACGT...AACCCTGGGCTGATGGGAGCAGTGAGCGGGCTCCGCTGCCCCCTGCCCTGCACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
CDS-3UTR TCA 90 bp CGGAGCCCGCTCACTGCTCCCATCAGCCCAGGGTTCCTGGAGCCCGTCCAGAGCGTGGGGGTCGGGCTTTaGAGAAGTCTGAGATGTAGC +
Preference number: 4 (lower is better)
Translates to: RSPLTAPISPGFLEPVQSVGVGL*RSLRCS
Trigger: GCTACATCTCAGACTTCTTCAAAGCCCGACCCCCAC...GCTCTGGACGGGCTCCAGGAACCCTGGGCTGATGGGAGCAGTGAGCGGGCTCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
CDS-3UTR TCA 90 bp AAGGGTACCCAGGGCAGCACTAGGGTTGGCTGGGGAGTGGTCTCTGGACAACACGGTCCCAGGGAGGACTaGCAGGGAGGAGGCCCAAGG +
Preference number: 4 (lower is better)
Translates to: KGTQGSTRVGWGVVSGQHGPRED*QGGGPR
Trigger: CCTTGGGCCTCCTCCCTGTCAGTCCTCCCTGGGACC...GTGTTGTCCAGAGACCACTCCCCAGCCAACCCTAGTGCTGCCCTGGGTACCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586998.3
CDS-3UTR GCA 90 bp CGACGGGAACAGGTTCCCCTCCAAATGCTGAGGGCTACCCAGGCATCTCCAGACGAGGGCAGCCACCAGTaGCCCCTGCAGGAGGCCAAC +
Preference number: 4 (lower is better)
Translates to: RREQVPLQMLRATQASPDEGSHQ*PLQEAN
Trigger: GTTGGCCTCCTGCAGGGGGCACTGGTGGCTGCCCTC...GTCTGGAGATGCCTGGGTAGCCCTCAGCATTTGGAGGGGAACCTGTTCCCGTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
CDS-3UTR CCA 90 bp GCGGAGCCCGCTCACTGCTCCCATCAGCCCAGGGTTCCTGGAGCCCGTCCAGAGGGTAGGGGTACCGGATaGAGTCATCCCCGCAGTAAA +
Preference number: 4 (lower is better)
Translates to: AEPAHCSHQPRVPGARPEGRGTG*SHPRSK
Trigger: TTTACTGCGGGGATGACTCCATCCGGTACCCCTACC...CTCTGGACGGGCTCCAGGAACCCTGGGCTGATGGGAGCAGTGAGCGGGCTCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
CDS-3UTR CCA 90 bp GCAGCGGAGCCCGCTCACTGCTCCCATCAGCCCAGGGTTCCTGGAGCCCGTCCAGTGGGTGATGGTATCTaGACGGTAGGGGTACCGGAT +
Preference number: 4 (lower is better)
Translates to: AAEPAHCSHQPRVPGARPVGDGI*TVGVPD
Trigger: ATCCGGTACCCCTACCGTCCAGATACCATCACCCAC...TGGACGGGCTCCAGGAACCCTGGGCTGATGGGAGCAGTGAGCGGGCTCCGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
CDS-3UTR CCA 90 bp CGCTCACTGCTCCCATCAGCCCAGGGTTCCTGGAGCCCGTCCAGAGCCCTCAGTCCAGCCATGAGCCCGTaGGTGATGGTATCTGGACGG +
Preference number: 4 (lower is better)
Translates to: RSLLPSAQGSWSPSRALSPAMSP*VMVSGR
Trigger: CCGTCCAGATACCATCACCCACGGGCTCATGGCTGG...ACTGAGGGCTCTGGACGGGCTCCAGGAACCCTGGGCTGATGGGAGCAGTGAGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
CDS-3UTR CCA 90 bp CGGAGCCCGCTCACTGCTCCCATCAGCCCAGGGTTCCTGGAGCCCGTCCAGAGCAGACGGCTAGGAAGTTaGGCCTCAGACGCCCAATCA +
Preference number: 4 (lower is better)
Translates to: RSPLTAPISPGFLEPVQSRRLGS*ASDAQS
Trigger: TGATTGGGCGTCTGAGGCCCAACTTCCTAGCCGTCT...GCTCTGGACGGGCTCCAGGAACCCTGGGCTGATGGGAGCAGTGAGCGGGCTCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
CDS-3UTR CCA 90 bp GCGGAGCCCGCTCACTGCTCCCATCAGCCCAGGGTTCCTGGAGCCCGTCCAGAGAGACGGCTAGGAAGTTaGGCCTCAGACGCCCAATCA +
Preference number: 4 (lower is better)
Translates to: AEPAHCSHQPRVPGARPERRLGS*ASDAQS
Trigger: TGATTGGGCGTCTGAGGCCCAACTTCCTAGCCGTCT...CTCTGGACGGGCTCCAGGAACCCTGGGCTGATGGGAGCAGTGAGCGGGCTCCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
CDS-3UTR TCA 90 bp GTGCAGGGCAGGGGGCAGCGGAGCCCGCTCACTGCTCCCATCAGCCCAGGGTTCCAGCCACGTAGTTGTTaGAGTCCGAGCGAGAATAGA +
Preference number: 4 (lower is better)
Translates to: VQGRGQRSPLTAPISPGFQPRSC*SPSENR
Trigger: TCTATTCTCGCTCGGACTTCAACAACTACGTGGCTG...GAACCCTGGGCTGATGGGAGCAGTGAGCGGGCTCCGCTGCCCCCTGCCCTGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
CDS-3UTR TCA 90 bp CAGCCCAGGGTTCCTGGAGCCCGTCCAGAGCCCTCAGTGCCTAACCAGGGCTGGGTGGGGGTCGGGCTTTaGAGAAGTCTGAGATGTAGC +
Preference number: 4 (lower is better)
Translates to: QPRVPGARPEPSVPNQGWVGVGL*RSLRCS
Trigger: GCTACATCTCAGACTTCTTCAAAGCCCGACCCCCAC...CCAGCCCTGGTTAGGCACTGAGGGCTCTGGACGGGCTCCAGGAACCCTGGGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
CDS-3UTR GCA 90 bp GCAGCGGAGCCCGCTCACTGCTCCCATCAGCCCAGGGTTCCTGGAGCCCGTCCACAACAGAGTCGTGCCTaGACATACAGCGCCAAGAAC +
Preference number: 4 (lower is better)
Translates to: AAEPAHCSHQPRVPGARPQQSRA*TYSAKN
Trigger: GTTCTTGGCGCTGTATGTGCAGGCACGACTCTGTTG...TGGACGGGCTCCAGGAACCCTGGGCTGATGGGAGCAGTGAGCGGGCTCCGCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
CDS-3UTR GCA 90 bp CGGAGCCCGCTCACTGCTCCCATCAGCCCAGGGTTCCTGGAGCCCGTCCAGAGCCTTCCAACAGAGTCGTaGCTGCACATACAGCGCCAA +
Preference number: 4 (lower is better)
Translates to: RSPLTAPISPGFLEPVQSLPTES*LHIQRQ
Trigger: TTGGCGCTGTATGTGCAGGCACGACTCTGTTGGAAG...GCTCTGGACGGGCTCCAGGAACCCTGGGCTGATGGGAGCAGTGAGCGGGCTCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
CDS-3UTR GCA 90 bp CTCCAAATGCTGAGGGCTACCCAGGCATCTCCAGACTCCTGGTCCAGTGCAGGGGCGGAGCCCGCTCACTaGTCCCATCAGCCCAGGGTT +
Preference number: 4 (lower is better)
Translates to: LQMLRATQASPDSWSSAGAEPAH*SHQPRV
Trigger: AACCCTGGGCTGATGGGAGCAGTGAGCGGGCTCCGC...CCCTGCACTGGACCAGGAGTCTGGAGATGCCTGGGTAGCCCTCAGCATTTGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
CDS-3UTR CCA 90 bp GGCAAGGGTACCCAGGGCAGCACTAGGGTTGGCTGGGGAGTGGTCTCTGGACAAGGAAGAACTGGACTGTaGGTCGCAGCAGCCGTGCCC +
Preference number: 4 (lower is better)
Translates to: GKGTQGSTRVGWGVVSGQGRTGL*VAAAVP
Trigger: GGGCACGGCTGCTGCGACCCACAGTCCAGTTCTTCC...TTGTCCAGAGACCACTCCCCAGCCAACCCTAGTGCTGCCCTGGGTACCCTTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586998.3
CDS-3UTR CCA 90 bp CGGAGCCCGCTCACTGCTCCCATCAGCCCAGGGTTCCTGGAGCCCGTCCAGAGCCTTCAGACAGTGCTGTaGGGGTCGGGCTTTGAAGAA +
Preference number: 4 (lower is better)
Translates to: RSPLTAPISPGFLEPVQSLQTVL*GSGFEE
Trigger: TTCTTCAAAGCCCGACCCCCACAGCACTGTCTGAAG...GCTCTGGACGGGCTCCAGGAACCCTGGGCTGATGGGAGCAGTGAGCGGGCTCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
CDS-3UTR CCA 90 bp CGGGAACAGGTTCCCCTCCAAATGCTGAGGGCTACCCAGGCATCTCCAGACTCCGCTGGAGGGACCACCTaGGTGGGCCTCAGCTGGACT +
Preference number: 4 (lower is better)
Translates to: REQVPLQMLRATQASPDSAGGTT*VGLSWT
Trigger: AGTCCAGCTGAGGCCCACCCAGGTGGTCCCTCCAGC...GGAGTCTGGAGATGCCTGGGTAGCCCTCAGCATTTGGAGGGGAACCTGTTCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
CDS-3UTR CCA 90 bp CAGGTTCCCCTCCAAATGCTGAGGGCTACCCAGGCATCTCCAGACTCCTGGTCCGTGCCTAACCAGGGCTaGAGGGACCACCTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: QVPLQMLRATQASPDSWSVPNQG*RDHLGG
Trigger: CCCACCCAGGTGGTCCCTCCAGCCCTGGTTAGGCAC...GGACCAGGAGTCTGGAGATGCCTGGGTAGCCCTCAGCATTTGGAGGGGAACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
CDS-3UTR CCA 90 bp GTGCAGGGCAGGGGGCAGCGGAGCCCGCTCACTGCTCCCATCAGCCCAGGGTTCAAAGAAGGGGATATTTaGGGACCGACGGGAACAGGT +
Preference number: 4 (lower is better)
Translates to: VQGRGQRSPLTAPISPGFKEGDI*GPTGTG
Trigger: ACCTGTTCCCGTCGGTCCCCAAATATCCCCTTCTTT...GAACCCTGGGCTGATGGGAGCAGTGAGCGGGCTCCGCTGCCCCCTGCCCTGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
CDS-3UTR TCA 90 bp CGGAGCCCGCTCACTGCTCCCATCAGCCCAGGGTTCCTGGAGCCCGTCCAGAGCCAGCCACGTAGTTGTTaGAGTCCGAGCGAGAATAGA +
Preference number: 4 (lower is better)
Translates to: RSPLTAPISPGFLEPVQSQPRSC*SPSENR
Trigger: TCTATTCTCGCTCGGACTTCAACAACTACGTGGCTG...GCTCTGGACGGGCTCCAGGAACCCTGGGCTGATGGGAGCAGTGAGCGGGCTCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
CDS-3UTR TCA 90 bp GCAGCGGAGCCCGCTCACTGCTCCCATCAGCCCAGGGTTCCTGGAGCCCGTCCACAGCCACGTAGTTGTTaGAGTCCGAGCGAGAATAGA +
Preference number: 4 (lower is better)
Translates to: AAEPAHCSHQPRVPGARPQPRSC*SPSENR
Trigger: TCTATTCTCGCTCGGACTTCAACAACTACGTGGCTG...TGGACGGGCTCCAGGAACCCTGGGCTGATGGGAGCAGTGAGCGGGCTCCGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
CDS-3UTR TCA 90 bp CGACGGGAACAGGTTCCCCTCCAAATGCTGAGGGCTACCCAGGCATCTCCAGACCATAGACCGAGCAGTTaGCCCGGCTCCAGTCGGGGT +
Preference number: 4 (lower is better)
Translates to: RREQVPLQMLRATQASPDHRPSS*PGSSRG
Trigger: ACCCCGACTGGAGCCGGGTCAACTGCTCGGTCTATG...GTCTGGAGATGCCTGGGTAGCCCTCAGCATTTGGAGGGGAACCTGTTCCCGTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
CDS-3UTR GCA 90 bp CAGCCCAGGGTTCCTGGAGCCCGTCCAGAGCCCTCAGTGCCTAACCAGGGCTGGCAACAGAGTCGTGCCTaGACATACAGCGCCAAGAAC +
Preference number: 4 (lower is better)
Translates to: QPRVPGARPEPSVPNQGWQQSRA*TYSAKN
Trigger: GTTCTTGGCGCTGTATGTGCAGGCACGACTCTGTTG...CCAGCCCTGGTTAGGCACTGAGGGCTCTGGACGGGCTCCAGGAACCCTGGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
CDS-3UTR GCA 90 bp AAGGGTACCCAGGGCAGCACTAGGGTTGGCTGGGGAGTGGTCTCTGGACAACACGGGTCGCAGCAGCCGTaGCCACTTCCAACAGAGTCG +
Preference number: 4 (lower is better)
Translates to: KGTQGSTRVGWGVVSGQHGSQQP*PLPTES
Trigger: CGACTCTGTTGGAAGTGGGCACGGCTGCTGCGACCC...GTGTTGTCCAGAGACCACTCCCCAGCCAACCCTAGTGCTGCCCTGGGTACCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586998.3
CDS-3UTR CCA 90 bp GCGGAGCCCGCTCACTGCTCCCATCAGCCCAGGGTTCCTGGAGCCCGTCCAGAGGCCCAATCATGTACTTaGCCAGGTCTGTCAGAGACT +
Preference number: 4 (lower is better)
Translates to: AEPAHCSHQPRVPGARPEAQSCT*PGLSET
Trigger: AGTCTCTGACAGACCTGGCCAAGTACATGATTGGGC...CTCTGGACGGGCTCCAGGAACCCTGGGCTGATGGGAGCAGTGAGCGGGCTCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
CDS-3UTR CCA 90 bp CAGCCCAGGGTTCCTGGAGCCCGTCCAGAGCCCTCAGTGCCTAACCAGGGCTGGCTTCAGACAGTGCTGTaGGGGTCGGGCTTTGAAGAA +
Preference number: 4 (lower is better)
Translates to: QPRVPGARPEPSVPNQGWLQTVL*GSGFEE
Trigger: TTCTTCAAAGCCCGACCCCCACAGCACTGTCTGAAG...CCAGCCCTGGTTAGGCACTGAGGGCTCTGGACGGGCTCCAGGAACCCTGGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
CDS-3UTR CCA 90 bp CAGGTTCCCCTCCAAATGCTGAGGGCTACCCAGGCATCTCCAGACTCCTGGTCCTGGGTGGGCCTCAGCTaGACTCACAGCAGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: QVPLQMLRATQASPDSWSWVGLS*THSSSL
Trigger: CAGGGAGCTGCTGTGAGTCCAGCTGAGGCCCACCCA...GGACCAGGAGTCTGGAGATGCCTGGGTAGCCCTCAGCATTTGGAGGGGAACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
CDS-3UTR CCA 90 bp CCAAATGCTGAGGGCTACCCAGGCATCTCCAGACTCCTGGTCCAGTGCAGGGCAGAGGGACCACCTGGGTaGGCCTCAGCTGGACTCACA +
Preference number: 4 (lower is better)
Translates to: PNAEGYPGISRLLVQCRAEGPPG*ASAGLT
Trigger: TGTGAGTCCAGCTGAGGCCCACCCAGGTGGTCCCTC...TGCCCTGCACTGGACCAGGAGTCTGGAGATGCCTGGGTAGCCCTCAGCATTTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
CDS-3UTR CCA 90 bp CGGGAACAGGTTCCCCTCCAAATGCTGAGGGCTACCCAGGCATCTCCAGACTCCGCATCTCCAGACTCCTaGTCCAGTGCAGGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: REQVPLQMLRATQASPDSASPDS*SSAGQG
Trigger: CCCCTGCCCTGCACTGGACCAGGAGTCTGGAGATGC...GGAGTCTGGAGATGCCTGGGTAGCCCTCAGCATTTGGAGGGGAACCTGTTCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
CDS-3UTR CCA 90 bp GGCAAGGGTACCCAGGGCAGCACTAGGGTTGGCTGGGGAGTGGTCTCTGGACAACAAGGAAGGACTCAGTaGGGCAAGGGTACCCAGGGC +
Preference number: 4 (lower is better)
Translates to: GKGTQGSTRVGWGVVSGQQGRTQ*GKGTQG
Trigger: GCCCTGGGTACCCTTGCCCCACTGAGTCCTTCCTTG...TTGTCCAGAGACCACTCCCCAGCCAACCCTAGTGCTGCCCTGGGTACCCTTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586998.3
CDS-3UTR TCA 90 bp CTCCAAATGCTGAGGGCTACCCAGGCATCTCCAGACTCCTGGTCCAGTGCAGGGACAACCTGGCCTCGGTaGCATCAGCAGGGTTTCCCC +
Preference number: 4 (lower is better)
Translates to: LQMLRATQASPDSWSSAGTTWPR*HQQGFP
Trigger: GGGGAAACCCTGCTGATGTCACCGAGGCCAGGTTGT...CCCTGCACTGGACCAGGAGTCTGGAGATGCCTGGGTAGCCCTCAGCATTTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
CDS-3UTR TCA 90 bp AAGGGTACCCAGGGCAGCACTAGGGTTGGCTGGGGAGTGGTCTCTGGACAACACACAACCTGGCCTCGGTaGCATCAGCAGGGTTTCCCC +
Preference number: 4 (lower is better)
Translates to: KGTQGSTRVGWGVVSGQHTTWPR*HQQGFP
Trigger: GGGGAAACCCTGCTGATGTCACCGAGGCCAGGTTGT...GTGTTGTCCAGAGACCACTCCCCAGCCAACCCTAGTGCTGCCCTGGGTACCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586998.3
CDS-3UTR TCA 90 bp CCAAATGCTGAGGGCTACCCAGGCATCTCCAGACTCCTGGTCCAGTGCAGGGCAAGATGTAGCAGACAGTaGGGGCAGCCACCAGTGCCC +
Preference number: 4 (lower is better)
Translates to: PNAEGYPGISRLLVQCRARCSRQ*GQPPVP
Trigger: GGGCACTGGTGGCTGCCCTCACTGTCTGCTACATCT...TGCCCTGCACTGGACCAGGAGTCTGGAGATGCCTGGGTAGCCCTCAGCATTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
CDS-3UTR TCA 90 bp AAGGGTACCCAGGGCAGCACTAGGGTTGGCTGGGGAGTGGTCTCTGGACAACACGTTAGAAGCTCACAGTaGGGGCAGCCACCAGTGCCC +
Preference number: 4 (lower is better)
Translates to: KGTQGSTRVGWGVVSGQHVRSSQ*GQPPVP
Trigger: GGGCACTGGTGGCTGCCCTCACTGTGAGCTTCTAAC...GTGTTGTCCAGAGACCACTCCCCAGCCAACCCTAGTGCTGCCCTGGGTACCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586998.3
CDS-3UTR CCA 90 bp CGACGGGAACAGGTTCCCCTCCAAATGCTGAGGGCTACCCAGGCATCTCCAGACGCCACCAGGAAGAACTaGACTGTGGGTCGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: RREQVPLQMLRATQASPDATRKN*TVGRSS
Trigger: GCTGCTGCGACCCACAGTCCAGTTCTTCCTGGTGGC...GTCTGGAGATGCCTGGGTAGCCCTCAGCATTTGGAGGGGAACCTGTTCCCGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
CDS-3UTR CCA 90 bp AAGGGTACCCAGGGCAGCACTAGGGTTGGCTGGGGAGTGGTCTCTGGACAACACGCCACCAGGAAGAACTaGACTGTGGGTCGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: KGTQGSTRVGWGVVSGQHATRKN*TVGRSS
Trigger: GCTGCTGCGACCCACAGTCCAGTTCTTCCTGGTGGC...GTGTTGTCCAGAGACCACTCCCCAGCCAACCCTAGTGCTGCCCTGGGTACCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586998.3
CDS-3UTR CCA 90 bp AAGGGTACCCAGGGCAGCACTAGGGTTGGCTGGGGAGTGGTCTCTGGACAACACGGGTTGGCTGGGGAGTaGTCTCTGGACAACACAGGG +
Preference number: 4 (lower is better)
Translates to: KGTQGSTRVGWGVVSGQHGLAGE*SLDNTG
Trigger: CCCTGTGTTGTCCAGAGACCACTCCCCAGCCAACCC...GTGTTGTCCAGAGACCACTCCCCAGCCAACCCTAGTGCTGCCCTGGGTACCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586998.3
CDS-3UTR TCA 90 bp CAGGTTCCCCTCCAAATGCTGAGGGCTACCCAGGCATCTCCAGACTCCTGGTCCTTCCCCTCCAAATGCTaGGGGCTACCCAGGCATCTC +
Preference number: 4 (lower is better)
Translates to: QVPLQMLRATQASPDSWSFPSKC*GLPRHL
Trigger: GAGATGCCTGGGTAGCCCTCAGCATTTGGAGGGGAA...GGACCAGGAGTCTGGAGATGCCTGGGTAGCCCTCAGCATTTGGAGGGGAACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
CDS-3UTR TCA 90 bp CGGAGCCCGCTCACTGCTCCCATCAGCCCAGGGTTCCTGGAGCCCGTCCAGAGCAAAACAGCAACTATCTaGTCTCTCGGTCCCTTCCTT +
Preference number: 4 (lower is better)
Translates to: RSPLTAPISPGFLEPVQSKTATI*SLGPFL
Trigger: AAGGAAGGGACCGAGAGATCAGATAGTTGCTGTTTT...GCTCTGGACGGGCTCCAGGAACCCTGGGCTGATGGGAGCAGTGAGCGGGCTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
CDS-3UTR GCA 90 bp CGCTCACTGCTCCCATCAGCCCAGGGTTCCTGGAGCCCGTCCAGAGCCCTCAGTGCGCCAAGAACACCATaGAGTACATCCCAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: RSLLPSAQGSWSPSRALSAPRTP*STSQRK
Trigger: CTTCCTTTGGGATGTACTGCATGGTGTTCTTGGCGC...ACTGAGGGCTCTGGACGGGCTCCAGGAACCCTGGGCTGATGGGAGCAGTGAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
CDS-3UTR CCA 90 bp ACAGGTTCCCCTCCAAATGCTGAGGGCTACCCAGGCATCTCCAGACTCCTGGTCGCCACCAGGAAGAACTaGACTGTGGGTCGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: TGSPPNAEGYPGISRLLVATRKN*TVGRSS
Trigger: GCTGCTGCGACCCACAGTCCAGTTCTTCCTGGTGGC...GACCAGGAGTCTGGAGATGCCTGGGTAGCCCTCAGCATTTGGAGGGGAACCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
CDS-3UTR CCA 90 bp CAGGTTCCCCTCCAAATGCTGAGGGCTACCCAGGCATCTCCAGACTCCTGGTCCACGTCAGTGACAGGCTaGGCTTCCGTTCCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: QVPLQMLRATQASPDSWSTSVTG*ASVPAP
Trigger: AGGAGCTGGAACGGAAGCCCAGCCTGTCACTGACGT...GGACCAGGAGTCTGGAGATGCCTGGGTAGCCCTCAGCATTTGGAGGGGAACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
CDS-3UTR TCA 90 bp CGCTCACTGCTCCCATCAGCCCAGGGTTCCTGGAGCCCGTCCAGAGCCCTCAGTGGCTTTGAAGAAGTCTaGGATGTAGCAGACAGTGAG +
Preference number: 4 (lower is better)
Translates to: RSLLPSAQGSWSPSRALSGFEEV*DVADSE
Trigger: CTCACTGTCTGCTACATCTCAGACTTCTTCAAAGCC...ACTGAGGGCTCTGGACGGGCTCCAGGAACCCTGGGCTGATGGGAGCAGTGAGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
CDS-3UTR GCA 90 bp GGCAAGGGTACCCAGGGCAGCACTAGGGTTGGCTGGGGAGTGGTCTCTGGACAACAACAGAGTCGTGCCTaGACATACAGCGCCAAGAAC +
Preference number: 4 (lower is better)
Translates to: GKGTQGSTRVGWGVVSGQQQSRA*TYSAKN
Trigger: GTTCTTGGCGCTGTATGTGCAGGCACGACTCTGTTG...TTGTCCAGAGACCACTCCCCAGCCAACCCTAGTGCTGCCCTGGGTACCCTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586998.3
CDS-3UTR CCA 90 bp CAGGTTCCCCTCCAAATGCTGAGGGCTACCCAGGCATCTCCAGACTCCTGGTCCGTGGGTGATGGTATCTaGACGGTAGGGGTACCGGAT +
Preference number: 4 (lower is better)
Translates to: QVPLQMLRATQASPDSWSVGDGI*TVGVPD
Trigger: ATCCGGTACCCCTACCGTCCAGATACCATCACCCAC...GGACCAGGAGTCTGGAGATGCCTGGGTAGCCCTCAGCATTTGGAGGGGAACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
CDS-3UTR CCA 90 bp ACAGGTTCCCCTCCAAATGCTGAGGGCTACCCAGGCATCTCCAGACTCCTGGTCAGGTCTGTCAGAGACTaGCTCACGGCAGCCCCAAAC +
Preference number: 4 (lower is better)
Translates to: TGSPPNAEGYPGISRLLVRSVRD*LTAAPN
Trigger: GTTTGGGGCTGCCGTGAGCCAGTCTCTGACAGACCT...GACCAGGAGTCTGGAGATGCCTGGGTAGCCCTCAGCATTTGGAGGGGAACCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
CDS-3UTR CCA 90 bp CCAAATGCTGAGGGCTACCCAGGCATCTCCAGACTCCTGGTCCAGTGCAGGGCAAGACGGCTAGGAAGTTaGGCCTCAGACGCCCAATCA +
Preference number: 4 (lower is better)
Translates to: PNAEGYPGISRLLVQCRARRLGS*ASDAQS
Trigger: TGATTGGGCGTCTGAGGCCCAACTTCCTAGCCGTCT...TGCCCTGCACTGGACCAGGAGTCTGGAGATGCCTGGGTAGCCCTCAGCATTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
CDS-3UTR CCA 90 bp AAGGGTACCCAGGGCAGCACTAGGGTTGGCTGGGGAGTGGTCTCTGGACAACACAGACGGCTAGGAAGTTaGGCCTCAGACGCCCAATCA +
Preference number: 4 (lower is better)
Translates to: KGTQGSTRVGWGVVSGQHRRLGS*ASDAQS
Trigger: TGATTGGGCGTCTGAGGCCCAACTTCCTAGCCGTCT...GTGTTGTCCAGAGACCACTCCCCAGCCAACCCTAGTGCTGCCCTGGGTACCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586998.3
CDS-3UTR CCA 90 bp AAGGGTACCCAGGGCAGCACTAGGGTTGGCTGGGGAGTGGTCTCTGGACAACACCTGGGGAGTGGTCTCTaGACAACACAGGGGATAGAG +
Preference number: 4 (lower is better)
Translates to: KGTQGSTRVGWGVVSGQHLGSGL*TTQGIE
Trigger: CTCTATCCCCTGTGTTGTCCAGAGACCACTCCCCAG...GTGTTGTCCAGAGACCACTCCCCAGCCAACCCTAGTGCTGCCCTGGGTACCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000586998.3
CDS-3UTR CCA 90 bp AAGGGTACCCAGGGCAGCACTAGGGTTGGCTGGGGAGTGGTCTCTGGACAACACAGCACTAGGGTTGGCTaGGGAGTGGTCTCTGGACAA +
Preference number: 4 (lower is better)
Translates to: KGTQGSTRVGWGVVSGQHSTRVG*GVVSGQ
Trigger: TTGTCCAGAGACCACTCCCCAGCCAACCCTAGTGCT...GTGTTGTCCAGAGACCACTCCCCAGCCAACCCTAGTGCTGCCCTGGGTACCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586998.3
CDS-3UTR GCA 90 bp CCAAATGCTGAGGGCTACCCAGGCATCTCCAGACTCCTGGTCCAGTGCAGGGCACAACAGAGTCGTGCCTaGACATACAGCGCCAAGAAC +
Preference number: 4 (lower is better)
Translates to: PNAEGYPGISRLLVQCRAQQSRA*TYSAKN
Trigger: GTTCTTGGCGCTGTATGTGCAGGCACGACTCTGTTG...TGCCCTGCACTGGACCAGGAGTCTGGAGATGCCTGGGTAGCCCTCAGCATTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
CDS-3UTR GCA 90 bp CAGGTTCCCCTCCAAATGCTGAGGGCTACCCAGGCATCTCCAGACTCCTGGTCCCTTCCAACAGAGTCGTaGCTGCACATACAGCGCCAA +
Preference number: 4 (lower is better)
Translates to: QVPLQMLRATQASPDSWSLPTES*LHIQRQ
Trigger: TTGGCGCTGTATGTGCAGGCACGACTCTGTTGGAAG...GGACCAGGAGTCTGGAGATGCCTGGGTAGCCCTCAGCATTTGGAGGGGAACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
CDS-3UTR GCA 90 bp CTCCAAATGCTGAGGGCTACCCAGGCATCTCCAGACTCCTGGTCCAGTGCAGGGCTTCCAACAGAGTCGTaGCTGCACATACAGCGCCAA +
Preference number: 4 (lower is better)
Translates to: LQMLRATQASPDSWSSAGLPTES*LHIQRQ
Trigger: TTGGCGCTGTATGTGCAGGCACGACTCTGTTGGAAG...CCCTGCACTGGACCAGGAGTCTGGAGATGCCTGGGTAGCCCTCAGCATTTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
CDS-3UTR GCA 90 bp AAGGGTACCCAGGGCAGCACTAGGGTTGGCTGGGGAGTGGTCTCTGGACAACACCTTCCAACAGAGTCGTaGCTGCACATACAGCGCCAA +
Preference number: 4 (lower is better)
Translates to: KGTQGSTRVGWGVVSGQHLPTES*LHIQRQ
Trigger: TTGGCGCTGTATGTGCAGGCACGACTCTGTTGGAAG...GTGTTGTCCAGAGACCACTCCCCAGCCAACCCTAGTGCTGCCCTGGGTACCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586998.3
CDS-3UTR CCA 90 bp GGCAAGGGTACCCAGGGCAGCACTAGGGTTGGCTGGGGAGTGGTCTCTGGACAAGCCCAATCATGTACTTaGCCAGGTCTGTCAGAGACT +
Preference number: 4 (lower is better)
Translates to: GKGTQGSTRVGWGVVSGQAQSCT*PGLSET
Trigger: AGTCTCTGACAGACCTGGCCAAGTACATGATTGGGC...TTGTCCAGAGACCACTCCCCAGCCAACCCTAGTGCTGCCCTGGGTACCCTTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586998.3
CDS-3UTR CCA 90 bp CGACGGGAACAGGTTCCCCTCCAAATGCTGAGGGCTACCCAGGCATCTCCAGACCTTCAGACAGTGCTGTaGGGGTCGGGCTTTGAAGAA +
Preference number: 4 (lower is better)
Translates to: RREQVPLQMLRATQASPDLQTVL*GSGFEE
Trigger: TTCTTCAAAGCCCGACCCCCACAGCACTGTCTGAAG...GTCTGGAGATGCCTGGGTAGCCCTCAGCATTTGGAGGGGAACCTGTTCCCGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
CDS-3UTR GCA 90 bp CGGGAACAGGTTCCCCTCCAAATGCTGAGGGCTACCCAGGCATCTCCAGACTCCGCGCCAAGAACACCATaGAGTACATCCCAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: REQVPLQMLRATQASPDSAPRTP*STSQRK
Trigger: CTTCCTTTGGGATGTACTGCATGGTGTTCTTGGCGC...GGAGTCTGGAGATGCCTGGGTAGCCCTCAGCATTTGGAGGGGAACCTGTTCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
CDS-3UTR GCA 90 bp CCAAATGCTGAGGGCTACCCAGGCATCTCCAGACTCCTGGTCCAGTGCAGGGCAGCGCCAAGAACACCATaGAGTACATCCCAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: PNAEGYPGISRLLVQCRAAPRTP*STSQRK
Trigger: CTTCCTTTGGGATGTACTGCATGGTGTTCTTGGCGC...TGCCCTGCACTGGACCAGGAGTCTGGAGATGCCTGGGTAGCCCTCAGCATTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
CDS-3UTR GCA 90 bp AAGGGTACCCAGGGCAGCACTAGGGTTGGCTGGGGAGTGGTCTCTGGACAACACGCGCCAAGAACACCATaGAGTACATCCCAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: KGTQGSTRVGWGVVSGQHAPRTP*STSQRK
Trigger: CTTCCTTTGGGATGTACTGCATGGTGTTCTTGGCGC...GTGTTGTCCAGAGACCACTCCCCAGCCAACCCTAGTGCTGCCCTGGGTACCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586998.3
CDS-3UTR CCA 90 bp CAGGTTCCCCTCCAAATGCTGAGGGCTACCCAGGCATCTCCAGACTCCTGGTCCGCCCAATCATGTACTTaGCCAGGTCTGTCAGAGACT +
Preference number: 4 (lower is better)
Translates to: QVPLQMLRATQASPDSWSAQSCT*PGLSET
Trigger: AGTCTCTGACAGACCTGGCCAAGTACATGATTGGGC...GGACCAGGAGTCTGGAGATGCCTGGGTAGCCCTCAGCATTTGGAGGGGAACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
CDS-3UTR CCA 90 bp CTCCAAATGCTGAGGGCTACCCAGGCATCTCCAGACTCCTGGTCCAGTGCAGGGAAAGAAGGGGATATTTaGGGACCGACGGGAACAGGT +
Preference number: 4 (lower is better)
Translates to: LQMLRATQASPDSWSSAGKEGDI*GPTGTG
Trigger: ACCTGTTCCCGTCGGTCCCCAAATATCCCCTTCTTT...CCCTGCACTGGACCAGGAGTCTGGAGATGCCTGGGTAGCCCTCAGCATTTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
CDS-3UTR TCA 90 bp CTCCAAATGCTGAGGGCTACCCAGGCATCTCCAGACTCCTGGTCCAGTGCAGGGGGCTTTGAAGAAGTCTaGGATGTAGCAGACAGTGAG +
Preference number: 4 (lower is better)
Translates to: LQMLRATQASPDSWSSAGGFEEV*DVADSE
Trigger: CTCACTGTCTGCTACATCTCAGACTTCTTCAAAGCC...CCCTGCACTGGACCAGGAGTCTGGAGATGCCTGGGTAGCCCTCAGCATTTGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
CDS-3UTR CCA 90 bp ACAGGTTCCCCTCCAAATGCTGAGGGCTACCCAGGCATCTCCAGACTCCTGGTCGCCCAATCATGTACTTaGCCAGGTCTGTCAGAGACT +
Preference number: 4 (lower is better)
Translates to: TGSPPNAEGYPGISRLLVAQSCT*PGLSET
Trigger: AGTCTCTGACAGACCTGGCCAAGTACATGATTGGGC...GACCAGGAGTCTGGAGATGCCTGGGTAGCCCTCAGCATTTGGAGGGGAACCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
CDS-3UTR CCA 90 bp ACAGGTTCCCCTCCAAATGCTGAGGGCTACCCAGGCATCTCCAGACTCCTGGTCAAAGAAGGGGATATTTaGGGACCGACGGGAACAGGT +
Preference number: 4 (lower is better)
Translates to: TGSPPNAEGYPGISRLLVKEGDI*GPTGTG
Trigger: ACCTGTTCCCGTCGGTCCCCAAATATCCCCTTCTTT...GACCAGGAGTCTGGAGATGCCTGGGTAGCCCTCAGCATTTGGAGGGGAACCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
CDS-3UTR TCA 90 bp CGGGAACAGGTTCCCCTCCAAATGCTGAGGGCTACCCAGGCATCTCCAGACTCCAAAACAGCAACTATCTaGTCTCTCGGTCCCTTCCTT +
Preference number: 4 (lower is better)
Translates to: REQVPLQMLRATQASPDSKTATI*SLGPFL
Trigger: AAGGAAGGGACCGAGAGATCAGATAGTTGCTGTTTT...GGAGTCTGGAGATGCCTGGGTAGCCCTCAGCATTTGGAGGGGAACCTGTTCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
CDS-3UTR TCA 90 bp CCAAATGCTGAGGGCTACCCAGGCATCTCCAGACTCCTGGTCCAGTGCAGGGCAAAAACAGCAACTATCTaGTCTCTCGGTCCCTTCCTT +
Preference number: 4 (lower is better)
Translates to: PNAEGYPGISRLLVQCRAKTATI*SLGPFL
Trigger: AAGGAAGGGACCGAGAGATCAGATAGTTGCTGTTTT...TGCCCTGCACTGGACCAGGAGTCTGGAGATGCCTGGGTAGCCCTCAGCATTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
CDS CCA 90 bp AGGATAGCGAAGGGCAGGGAGGCTCCCAGGCCAGGCGGGGCGGGATaGAGGCGCGCGCGCGGCCCCTCCGCACAGACTTCCTGCTGCCGG +
Preference number: 5 (lower is better)
Translates to: RIAKGREAPRPGGAG*RRARGPSAQTSCCR
Trigger: CCGGCAGCAGGAAGTCTGTGCGGAGGGGCCGCGCGCGCGCCTCCATCCCGCCCCGCCTGGCCTGGGAGCCTCCCTGCCCTTCGCTATCCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327790.7
CDS CCA 90 bp GTAAGCACAGCACGTCGAGCAGCACGAAGACCCACCTCCGCTGCATaGTCCCCGCGACCCCCGACGCCGGTCCCAGCGCGTCCCGTCGCG +
Preference number: 5 (lower is better)
Translates to: VSTARRAARRPTSAA*SPRPPTPVPARPVA
Trigger: CGCGACGGGACGCGCTGGGACCGGCGTCGGGGGTCGCGGGGACCATGCAGCGGAGGTGGGTCTTCGTGCTGCTCGACGTGCTGTGCTTAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000434325.7
ENST00000591572.2
ENST00000633125.1
CDS GCA 90 bp GGCAGTAAGCACAGCACGTCGAGCAGCACGAAGACCCACCTCCGCTaGATGGTCCCCGCGACCCCCGACGCCGGTCCCAGCGCGTCCCGT +
Preference number: 5 (lower is better)
Translates to: GSKHSTSSSTKTHLR*MVPATPDAGPSASR
Trigger: ACGGGACGCGCTGGGACCGGCGTCGGGGGTCGCGGGGACCATGCAGCGGAGGTGGGTCTTCGTGCTGCTCGACGTGCTGTGCTTACTGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000633125.1
CDS GCA 90 bp GAGGGACCACCTGGGTGGGCCTCAGCTGGACTCACAGCAGCTCCCTaGCTGGGCGGGGTCCGGCCTCAGGAGGAGGAGTGCGGGTATCCA +
Preference number: 5 (lower is better)
Translates to: EGPPGWASAGLTAAP*LGGVRPQEEECGYP
Trigger: TGGATACCCGCACTCCTCCTCCTGAGGCCGGACCCCGCCCAGGCAGGGAGCTGCTGTGAGTCCAGCTGAGGCCCACCCAGGTGGTCCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
ENST00000621795.1
CDS GCA 90 bp ACCAGTAAGCACAGCACGTCGAGCAGCACGAAGACCCACCTCCGCTaGATGGTCCCCGCGACCCCCGACGCCGGTCCCAGCGCGTCCCGT +
Preference number: 5 (lower is better)
Translates to: TSKHSTSSSTKTHLR*MVPATPDAGPSASR
Trigger: ACGGGACGCGCTGGGACCGGCGTCGGGGGTCGCGGGGACCATGCAGCGGAGGTGGGTCTTCGTGCTGCTCGACGTGCTGTGCTTACTGGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434325.7
ENST00000591572.2
CDS-3UTR CAA 90 bp GCAGCGGAGCCCGCTCACTGCTCCCATCAGCCCAGGGTTCCTGGAGCCCGTCCACAGACGGCTAGGAAGTaGGGCCTCAGACGCCCAATC +
Preference number: 5 (lower is better)
Translates to: AAEPAHCSHQPRVPGARPQTARK*GLRRPI
Trigger: GATTGGGCGTCTGAGGCCCAACTTCCTAGCCGTCTG...TGGACGGGCTCCAGGAACCCTGGGCTGATGGGAGCAGTGAGCGGGCTCCGCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
CDS GCA 90 bp GCTGTGAGGTTCTCTCACCAGCTGGGCCTTGGGGCCCCACACACCTaGCTTGGCCTGGAGGCCTCCCACCTCTACTCTCACCAGACAGCA +
Preference number: 5 (lower is better)
Translates to: AVRFSHQLGLGAPHT*LGLEASHLYSHQTA
Trigger: TGCTGTCTGGTGAGAGTAGAGGTGGGAGGCCTCCAGGCCAAGGCAGGTGTGTGGGGCCCCAAGGCCCAGCTGGTGAGAGAACCTCACAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000589672.2
ENST00000621795.1
CDS-3UTR CAA 90 bp CGGAGCCCGCTCACTGCTCCCATCAGCCCAGGGTTCCTGGAGCCCGTCCAGAGCCGCCCAATCATGTACTaGGCCAGGTCTGTCAGAGAC +
Preference number: 5 (lower is better)
Translates to: RSPLTAPISPGFLEPVQSRPIMY*ARSVRD
Trigger: GTCTCTGACAGACCTGGCCAAGTACATGATTGGGCG...GCTCTGGACGGGCTCCAGGAACCCTGGGCTGATGGGAGCAGTGAGCGGGCTCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
CDS TCA 90 bp GGTTTCCCCTGCACACCTTCTCCAGCTGCACATAGACCGAGCAGTTaGCCCGGCTCCAGTCGGGGTCGCAGACGGCTAGGAAGTTGGGCC +
Preference number: 5 (lower is better)
Translates to: GFPCTPSPAAHRPSS*PGSSRGRRRLGSWA
Trigger: GGCCCAACTTCCTAGCCGTCTGCGACCCCGACTGGAGCCGGGTCAACTGCTCGGTCTATGTGCAGCTGGAGAAGGTGTGCAGGGGAAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
ENST00000586998.3
ENST00000591572.2
ENST00000621795.1
ENST00000633125.1
CDS-3UTR CAA 90 bp CAGCCCAGGGTTCCTGGAGCCCGTCCAGAGCCCTCAGTGCCTAACCAGGGCTGGCGCCCAATCATGTACTaGGCCAGGTCTGTCAGAGAC +
Preference number: 5 (lower is better)
Translates to: QPRVPGARPEPSVPNQGWRPIMY*ARSVRD
Trigger: GTCTCTGACAGACCTGGCCAAGTACATGATTGGGCG...CCAGCCCTGGTTAGGCACTGAGGGCTCTGGACGGGCTCCAGGAACCCTGGGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
CDS CCA 90 bp AGTGGTTGTGGTCAGCCTCGCCCAGGGTCAACGTCAGTGACAGGCTaGGCTTCCGTTCCAGCTCCTCCTCCTTCAGACAGTGCTGTGGGG +
Preference number: 5 (lower is better)
Translates to: SGCGQPRPGSTSVTG*ASVPAPPPSDSAVG
Trigger: CCCCACAGCACTGTCTGAAGGAGGAGGAGCTGGAACGGAAGCCCAGCCTGTCACTGACGTTGACCCTGGGCGAGGCTGACCACAACCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
ENST00000621795.1
CDS-3UTR CAA 90 bp AAGGGTACCCAGGGCAGCACTAGGGTTGGCTGGGGAGTGGTCTCTGGACAACACAGGGCAGCACTAGGGTaGGCTGGGGAGTGGTCTCTG +
Preference number: 5 (lower is better)
Translates to: KGTQGSTRVGWGVVSGQHRAALG*AGEWSL
Trigger: CAGAGACCACTCCCCAGCCAACCCTAGTGCTGCCCT...GTGTTGTCCAGAGACCACTCCCCAGCCAACCCTAGTGCTGCCCTGGGTACCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586998.3
CDS TCA 90 bp CCCCACAAGAGTGAAGGCTGCTGGTCCACACCCACCTGGCCTCGGTaGCATCAGCAGGGTTTCCCCTGCACACCTTCTCCAGCTGCACAT +
Preference number: 5 (lower is better)
Translates to: PHKSEGCWSTPTWPR*HQQGFPCTPSPAAH
Trigger: ATGTGCAGCTGGAGAAGGTGTGCAGGGGAAACCCTGCTGATGTCACCGAGGCCAGGTGGGTGTGGACCAGCAGCCTTCACTCTTGTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621795.1
CDS CCA 90 bp TGTAGCCCACGTAGAGGGCAAAGGCCACCAGGAAGAACTGGACTGTaGGTCGCAGCAGCCGTGCCCACTTCCAACAGAGTCGTGCCTGCA +
Preference number: 5 (lower is better)
Translates to: CSPRRGQRPPGRTGL*VAAAVPTSNRVVPA
Trigger: TGCAGGCACGACTCTGTTGGAAGTGGGCACGGCTGCTGCGACCCACAGTCCAGTTCTTCCTGGTGGCCTTTGCCCTCTACGTGGGCTACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
ENST00000586998.3
ENST00000621795.1
ENST00000633125.1
CDS GCA 90 bp GGCAAAGGCCACCAGGAAGAACTGGACTGTGGGTCGCAGCAGCCGTaGCCACTTCCAACAGAGTCGTGCCTGCACATACAGCGCCAAGAA +
Preference number: 5 (lower is better)
Translates to: GKGHQEELDCGSQQP*PLPTESCLHIQRQE
Trigger: TTCTTGGCGCTGTATGTGCAGGCACGACTCTGTTGGAAGTGGGCACGGCTGCTGCGACCCACAGTCCAGTTCTTCCTGGTGGCCTTTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
ENST00000586998.3
ENST00000621795.1
ENST00000633125.1
CDS CCA 90 bp CGCAGACGGCTAGGAAGTTGGGCCTCAGACGCCCAATCATGTACTTaGCCAGGTCTGTCAGAGACTGGCTCACGGCAGCCCCAAACAGGA +
Preference number: 5 (lower is better)
Translates to: RRRLGSWASDAQSCT*PGLSETGSRQPQTG
Trigger: TCCTGTTTGGGGCTGCCGTGAGCCAGTCTCTGACAGACCTGGCCAAGTACATGATTGGGCGTCTGAGGCCCAACTTCCTAGCCGTCTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
ENST00000591572.2
ENST00000621795.1
ENST00000633125.1
CDS-3UTR CAA 90 bp GGCAAGGGTACCCAGGGCAGCACTAGGGTTGGCTGGGGAGTGGTCTCTGGACAACGCCCAATCATGTACTaGGCCAGGTCTGTCAGAGAC +
Preference number: 5 (lower is better)
Translates to: GKGTQGSTRVGWGVVSGQRPIMY*ARSVRD
Trigger: GTCTCTGACAGACCTGGCCAAGTACATGATTGGGCG...TTGTCCAGAGACCACTCCCCAGCCAACCCTAGTGCTGCCCTGGGTACCCTTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586998.3
CDS TCA 90 bp GTATCCATAGTGGTTGTGGTCAGCCTCGCCCAGGGTCAACGTCAGTaGCAGGCTGGGCTTCCGTTCCAGCTCCTCCTCCTTCAGACAGTG +
Preference number: 5 (lower is better)
Translates to: VSIVVVVSLAQGQRQ*QAGLPFQLLLLQTV
Trigger: CACTGTCTGAAGGAGGAGGAGCTGGAACGGAAGCCCAGCCTGTCACTGACGTTGACCCTGGGCGAGGCTGACCACAACCACTATGGATAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
ENST00000621795.1
CDS-3UTR CAA 90 bp ACAGGTTCCCCTCCAAATGCTGAGGGCTACCCAGGCATCTCCAGACTCCTGGTCCGCCCAATCATGTACTaGGCCAGGTCTGTCAGAGAC +
Preference number: 5 (lower is better)
Translates to: TGSPPNAEGYPGISRLLVRPIMY*ARSVRD
Trigger: GTCTCTGACAGACCTGGCCAAGTACATGATTGGGCG...GACCAGGAGTCTGGAGATGCCTGGGTAGCCCTCAGCATTTGGAGGGGAACCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
CDS TCA 90 bp CAGGCGCTCTGCCCCTCACATCCTGGCAGCCTCCTTTCTGCTCCTTaGACTAACTCAGCAAACACCCACCTTTGCACAGCCACTTCTCTC +
Preference number: 5 (lower is better)
Translates to: QALCPSHPGSLLSAP*TNSANTHLCTATSL
Trigger: GAGAGAAGTGGCTGTGCAAAGGTGGGTGTTTGCTGAGTTAGTTCAAGGAGCAGAAAGGAGGCTGCCAGGATGTGAGGGGCAGAGCGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589672.2
ENST00000621795.1
CDS CCA 90 bp CAACAGACTAACCAAACAGGCCAGGGAATAAAATGCTCTGGGCGATaGGGGCCTGGAACGCAGACAGAGCTGTGCAGGAGCTCAGGAGAG +
Preference number: 5 (lower is better)
Translates to: QQTNQTGQGIKCSGR*GPGTQTELCRSSGE
Trigger: CTCTCCTGAGCTCCTGCACAGCTCTGTCTGCGTTCCAGGCCCCCATCGCCCAGAGCATTTTATTCCCTGGCCTGTTTGGTTAGTCTGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621795.1
CDS TCA 90 bp AACTGTGGACGGGAGTATGGCTCAAGGGCTGGCCTTGATCTCACCTaGCTGGACATTCTCCCAGTGCTGAGGTGCTACCTGGGGGATATT +
Preference number: 5 (lower is better)
Translates to: NCGREYGSRAGLDLT*LDILPVLRCYLGDI
Trigger: AATATCCCCCAGGTAGCACCTCAGCACTGGGAGAATGTCCAGTCAGGTGAGATCAAGGCCAGCCCTTGAGCCATACTCCCGTCCACAGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000621795.1
CDS GCA 90 bp CGCCCACAGAAGGGAGGGCTCGACACGGAGGCTGCTGCTGTTAGATaGACTCAAATCCCAGTAGCAGAAACTGTTCCCCTTTTCTGTTCC +
Preference number: 5 (lower is better)
Translates to: RPQKGGLDTEAAAVR*TQIPVAETVPLFCS
Trigger: GGAACAGAAAAGGGGAACAGTTTCTGCTACTGGGATTTGAGTGCATCTAACAGCAGCAGCCTCCGTGTCGAGCCCTCCCTTCTGTGGGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621795.1
CDS TCA 90 bp ACAGGAAGGTCCCCAGCACCTTGTATACAGCAGCCACGTAGTTGTTaGAGTCCGAGCGAGAATAGAGCCGGTCTGTGTACACCAGGTAGG +
Preference number: 5 (lower is better)
Translates to: TGRSPAPCIQQPRSC*SPSENRAGLCTPGR
Trigger: CCTACCTGGTGTACACAGACCGGCTCTATTCTCGCTCGGACTTCAACAACTACGTGGCTGCTGTATACAAGGTGCTGGGGACCTTCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
ENST00000589672.2
ENST00000591572.2
ENST00000621795.1
ENST00000633125.1
CDS TCA 90 bp CTTTATTTGCAACTGTGGACGGGAGTATGGCTCAAGGGCTGGCCTTaGTCTCACCTGACTGGACATTCTCCCAGTGCTGAGGTGCTACCT +
Preference number: 5 (lower is better)
Translates to: LYLQLWTGVWLKGWP*SHLTGHSPSAEVLP
Trigger: AGGTAGCACCTCAGCACTGGGAGAATGTCCAGTCAGGTGAGATCAAGGCCAGCCCTTGAGCCATACTCCCGTCCACAGTTGCAAATAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621795.1
CDS GCA 90 bp CAAACGGCCTTGTCGCATTTTAACTCATCCTGGTCCCTCTCCCACTaGCTAGACTGGTGGTGGCCTGAGGATTCCAAGAACAGACTTTAT +
Preference number: 5 (lower is better)
Translates to: QTALSHFNSSWSLSH*LDWWWPEDSKNRLY
Trigger: ATAAAGTCTGTTCTTGGAATCCTCAGGCCACCACCAGTCTAGGCAGTGGGAGAGGGACCAGGATGAGTTAAAATGCGACAAGGCCGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621795.1
CDS CCA 90 bp CATTTTAACTCATCCTGGTCCCTCTCCCACTGCCTAGACTGGTGGTaGCCTGAGGATTCCAAGAACAGACTTTATTTGCAACTGTGGACG +
Preference number: 5 (lower is better)
Translates to: HFNSSWSLSHCLDWW*PEDSKNRLYLQLWT
Trigger: CGTCCACAGTTGCAAATAAAGTCTGTTCTTGGAATCCTCAGGCCACCACCAGTCTAGGCAGTGGGAGAGGGACCAGGATGAGTTAAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621795.1
CDS CCA 90 bp TCGCATTTTAACTCATCCTGGTCCCTCTCCCACTGCCTAGACTGGTaGTGGCCTGAGGATTCCAAGAACAGACTTTATTTGCAACTGTGG +
Preference number: 5 (lower is better)
Translates to: SHFNSSWSLSHCLDW*WPEDSKNRLYLQLW
Trigger: CCACAGTTGCAAATAAAGTCTGTTCTTGGAATCCTCAGGCCACCACCAGTCTAGGCAGTGGGAGAGGGACCAGGATGAGTTAAAATGCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621795.1
CDS CCA 90 bp CCTTTTCTGTTCCAGTCATCTGATAATGGAATAAGAGTCTCTGACTaGGGCTGTGGCATGAGATGCCTCATCCGTGAAGACTCTGAGGCC +
Preference number: 5 (lower is better)
Translates to: PFLFQSSDNGIRVSD*GCGMRCLIREDSEA
Trigger: GGCCTCAGAGTCTTCACGGATGAGGCATCTCATGCCACAGCCCCAGTCAGAGACTCTTATTCCATTATCAGATGACTGGAACAGAAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621795.1
CDS GCA 90 bp TGGGGGATATTTGTAGGAAACATTCACAACAAATTTATTATTCTCTaGTGCCTGGGGCCACAGACAGCAGATGAGGCAAACAACAGACTA +
Preference number: 5 (lower is better)
Translates to: WGIFVGNIHNKFIIL*CLGPQTADEANNRL
Trigger: TAGTCTGTTGTTTGCCTCATCTGCTGTCTGTGGCCCCAGGCAGCAGAGAATAATAAATTTGTTGTGAATGTTTCCTACAAATATCCCCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621795.1
CDS CCA 72 bp GCACGTCGAGCAGCACGAAGACCCACCTCCGCTGCATaGTCCCCGCGACCCCCGACGCCGGTCCCAGCGCGT +
Preference number: 6 (lower is better)
Translates to: ARRAARRPTSAA*SPRPPTPVPAR
Trigger: ACGCGCTGGGACCGGCGTCGGGGGTCGCGGGGACCATGCAGCGGAGGTGGGTCTTCGTGCTGCTCGACGTGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000434325.7
ENST00000591572.2
ENST00000633125.1
CDS GCA 72 bp CACAGCACGTCGAGCAGCACGAAGACCCACCTCCGCTaGATGGTCCCCGCGACCCCCGACGCCGGTCCCAGC +
Preference number: 6 (lower is better)
Translates to: HSTSSSTKTHLR*MVPATPDAGPS
Trigger: GCTGGGACCGGCGTCGGGGGTCGCGGGGACCATGCAGCGGAGGTGGGTCTTCGTGCTGCTCGACGTGCTGTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000434325.7
ENST00000591572.2
ENST00000633125.1
CDS CCA 72 bp CCTGGGAGCTGTGAGGTTCTCTCACCAGCTGGGCCTTaGGGCCCCACACACCTGCCTTGGCCTGGAGGCCTC +
Preference number: 6 (lower is better)
Translates to: PGSCEVLSPAGP*GPTHLPWPGGL
Trigger: GAGGCCTCCAGGCCAAGGCAGGTGTGTGGGGCCCCAAGGCCCAGCTGGTGAGAGAACCTCACAGCTCCCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589672.2
ENST00000621795.1
CDS CCA 72 bp CCCGGCTCCAGTCGGGGTCGCAGACGGCTAGGAAGTTaGGCCTCAGACGCCCAATCATGTACTTGGCCAGGT +
Preference number: 6 (lower is better)
Translates to: PGSSRGRRRLGS*ASDAQSCTWPG
Trigger: ACCTGGCCAAGTACATGATTGGGCGTCTGAGGCCCAACTTCCTAGCCGTCTGCGACCCCGACTGGAGCCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
ENST00000586998.3
ENST00000591572.2
ENST00000621795.1
ENST00000633125.1
CDS TCA 72 bp TGCACACCTTCTCCAGCTGCACATAGACCGAGCAGTTaGCCCGGCTCCAGTCGGGGTCGCAGACGGCTAGGA +
Preference number: 6 (lower is better)
Translates to: CTPSPAAHRPSS*PGSSRGRRRLG
Trigger: TCCTAGCCGTCTGCGACCCCGACTGGAGCCGGGTCAACTGCTCGGTCTATGTGCAGCTGGAGAAGGTGTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
ENST00000586998.3
ENST00000591572.2
ENST00000621795.1
ENST00000633125.1
CDS CCA 72 bp GGTCAGCCTCGCCCAGGGTCAACGTCAGTGACAGGCTaGGCTTCCGTTCCAGCTCCTCCTCCTTCAGACAGT +
Preference number: 6 (lower is better)
Translates to: GQPRPGSTSVTG*ASVPAPPPSDS
Trigger: ACTGTCTGAAGGAGGAGGAGCTGGAACGGAAGCCCAGCCTGTCACTGACGTTGACCCTGGGCGAGGCTGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
ENST00000621795.1
CDS CAA 90 bp GAGCAGTTGACCCGGCTCCAGTCGGGGTCGCAGACGGCTAGGAAGTaGGGCCTCAGACGCCCAATCATGTACTTGGCCAGGTCTGTCAGA +
Preference number: 6 (lower is better)
Translates to: EQLTRLQSGSQTARK*GLRRPIMYLARSVR
Trigger: TCTGACAGACCTGGCCAAGTACATGATTGGGCGTCTGAGGCCCAACTTCCTAGCCGTCTGCGACCCCGACTGGAGCCGGGTCAACTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
ENST00000586998.3
ENST00000591572.2
ENST00000621795.1
ENST00000633125.1
CDS TCA 72 bp AGTGAAGGCTGCTGGTCCACACCCACCTGGCCTCGGTaGCATCAGCAGGGTTTCCCCTGCACACCTTCTCCA +
Preference number: 6 (lower is better)
Translates to: SEGCWSTPTWPR*HQQGFPCTPSP
Trigger: TGGAGAAGGTGTGCAGGGGAAACCCTGCTGATGTCACCGAGGCCAGGTGGGTGTGGACCAGCAGCCTTCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621795.1
CDS TCA 72 bp CCTAGCTACTCGGGAGGCTCAGGTGGGAAGATGGCTTaGGCCTGGGAGTCCGAGGCTGCAGTGAGCTCAGAT +
Preference number: 6 (lower is better)
Translates to: PSYSGGSGGKMA*AWESEAAVSSD
Trigger: ATCTGAGCTCACTGCAGCCTCGGACTCCCAGGCTCAAGCCATCTTCCCACCTGAGCCTCCCGAGTAGCTAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621795.1
CDS CCA 72 bp CGTAGAGGGCAAAGGCCACCAGGAAGAACTGGACTGTaGGTCGCAGCAGCCGTGCCCACTTCCAACAGAGTC +
Preference number: 6 (lower is better)
Translates to: RRGQRPPGRTGL*VAAAVPTSNRV
Trigger: GACTCTGTTGGAAGTGGGCACGGCTGCTGCGACCCACAGTCCAGTTCTTCCTGGTGGCCTTTGCCCTCTACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
ENST00000586998.3
ENST00000621795.1
ENST00000633125.1
CDS CAA 90 bp TCGCAGACGGCTAGGAAGTTGGGCCTCAGACGCCCAATCATGTACTaGGCCAGGTCTGTCAGAGACTGGCTCACGGCAGCCCCAAACAGG +
Preference number: 6 (lower is better)
Translates to: SQTARKLGLRRPIMY*ARSVRDWLTAAPNR
Trigger: CCTGTTTGGGGCTGCCGTGAGCCAGTCTCTGACAGACCTGGCCAAGTACATGATTGGGCGTCTGAGGCCCAACTTCCTAGCCGTCTGCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
ENST00000591572.2
ENST00000621795.1
ENST00000633125.1
CDS GCA 72 bp GGGTCGCAGCAGCCGTGCCCACTTCCAACAGAGTCGTaGCTGCACATACAGCGCCAAGAACACCATGCAGTA +
Preference number: 6 (lower is better)
Translates to: GSQQPCPLPTES*LHIQRQEHHAV
Trigger: TACTGCATGGTGTTCTTGGCGCTGTATGTGCAGGCACGACTCTGTTGGAAGTGGGCACGGCTGCTGCGACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
ENST00000586998.3
ENST00000621795.1
ENST00000633125.1
CDS GCA 72 bp CACCAGGAAGAACTGGACTGTGGGTCGCAGCAGCCGTaGCCACTTCCAACAGAGTCGTGCCTGCACATACAG +
Preference number: 6 (lower is better)
Translates to: HQEELDCGSQQP*PLPTESCLHIQ
Trigger: CTGTATGTGCAGGCACGACTCTGTTGGAAGTGGGCACGGCTGCTGCGACCCACAGTCCAGTTCTTCCTGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
ENST00000586998.3
ENST00000621795.1
ENST00000633125.1
CDS CCA 72 bp CTAGGAAGTTGGGCCTCAGACGCCCAATCATGTACTTaGCCAGGTCTGTCAGAGACTGGCTCACGGCAGCCC +
Preference number: 6 (lower is better)
Translates to: LGSWASDAQSCT*PGLSETGSRQP
Trigger: GGGCTGCCGTGAGCCAGTCTCTGACAGACCTGGCCAAGTACATGATTGGGCGTCTGAGGCCCAACTTCCTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
ENST00000591572.2
ENST00000621795.1
ENST00000633125.1
CDS CCA 72 bp AGGCCAGGGAATAAAATGCTCTGGGCGATGGGGGCCTaGAACGCAGACAGAGCTGTGCAGGAGCTCAGGAGA +
Preference number: 6 (lower is better)
Translates to: RPGNKMLWAMGA*NADRAVQELRR
Trigger: TCTCCTGAGCTCCTGCACAGCTCTGTCTGCGTTCCAGGCCCCCATCGCCCAGAGCATTTTATTCCCTGGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621795.1
CDS CAA 72 bp GCTAGGAAGTTGGGCCTCAGACGCCCAATCATGTACTaGGCCAGGTCTGTCAGAGACTGGCTCACGGCAGCC +
Preference number: 6 (lower is better)
Translates to: ARKLGLRRPIMY*ARSVRDWLTAA
Trigger: GGCTGCCGTGAGCCAGTCTCTGACAGACCTGGCCAAGTACATGATTGGGCGTCTGAGGCCCAACTTCCTAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
ENST00000591572.2
ENST00000621795.1
ENST00000633125.1
CDS GCA 72 bp CATCCCCTCAGACAAACACAAACTCCTCAGGCGCTCTaGCCCTCACATCCTGGCAGCCTCCTTTCTGCTCCT +
Preference number: 6 (lower is better)
Translates to: HPLRQTQTPQAL*PSHPGSLLSAP
Trigger: AGGAGCAGAAAGGAGGCTGCCAGGATGTGAGGGGCAGAGCGCCTGAGGAGTTTGTGTTTGTCTGAGGGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589672.2
ENST00000621795.1
CDS CCA 72 bp AGGGTACCCAGGGCAGCACTAGGGTTGGCTGGGGAGTaGTCTCTGGACAACACAGGGGATAGAGTTAGGGTT +
Preference number: 6 (lower is better)
Translates to: RVPRAALGLAGE*SLDNTGDRVRV
Trigger: AACCCTAACTCTATCCCCTGTGTTGTCCAGAGACCACTCCCCAGCCAACCCTAGTGCTGCCCTGGGTACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586998.3
CDS TCA 72 bp TGCCCCTCACATCCTGGCAGCCTCCTTTCTGCTCCTTaGACTAACTCAGCAAACACCCACCTTTGCACAGCC +
Preference number: 6 (lower is better)
Translates to: CPSHPGSLLSAP*TNSANTHLCTA
Trigger: GGCTGTGCAAAGGTGGGTGTTTGCTGAGTTAGTTCAAGGAGCAGAAAGGAGGCTGCCAGGATGTGAGGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589672.2
ENST00000621795.1
CDS TCA 72 bp GTGGTACACACTTGTAATCCCAGTTACTCGGCAGGCTaGGGCAGAGAATCTCTTGAACCCGGGAGGCAGAGG +
Preference number: 6 (lower is better)
Translates to: VVHTCNPSYSAG*GRESLEPGRQR
Trigger: CCTCTGCCTCCCGGGTTCAAGAGATTCTCTGCCTCAGCCTGCCGAGTAACTGGGATTACAAGTGTGTACCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621795.1
CDS GCA 72 bp AAGGGAGGGCTCGACACGGAGGCTGCTGCTGTTAGATaGACTCAAATCCCAGTAGCAGAAACTGTTCCCCTT +
Preference number: 6 (lower is better)
Translates to: KGGLDTEAAAVR*TQIPVAETVPL
Trigger: AAGGGGAACAGTTTCTGCTACTGGGATTTGAGTGCATCTAACAGCAGCAGCCTCCGTGTCGAGCCCTCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621795.1
CDS CCA 72 bp TCAGAACAAACGGCCTTGTCGCATTTTAACTCATCCTaGTCCCTCTCCCACTGCCTAGACTGGTGGTGGCCT +
Preference number: 6 (lower is better)
Translates to: SEQTALSHFNSS*SLSHCLDWWWP
Trigger: AGGCCACCACCAGTCTAGGCAGTGGGAGAGGGACCAGGATGAGTTAAAATGCGACAAGGCCGTTTGTTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621795.1
CDS TCA 72 bp TCCCCAGCACCTTGTATACAGCAGCCACGTAGTTGTTaGAGTCCGAGCGAGAATAGAGCCGGTCTGTGTACA +
Preference number: 6 (lower is better)
Translates to: SPAPCIQQPRSC*SPSENRAGLCT
Trigger: TGTACACAGACCGGCTCTATTCTCGCTCGGACTTCAACAACTACGTGGCTGCTGTATACAAGGTGCTGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
ENST00000589672.2
ENST00000591572.2
ENST00000621795.1
ENST00000633125.1
CDS GCA 72 bp AGAGTCGTGCCTGCACATACAGCGCCAAGAACACCATaGAGTACATCCCAAAGGAAGAGTGTCCCGAGTAGA +
Preference number: 6 (lower is better)
Translates to: RVVPAHTAPRTP*STSQRKSVPSR
Trigger: TCTACTCGGGACACTCTTCCTTTGGGATGTACTGCATGGTGTTCTTGGCGCTGTATGTGCAGGCACGACTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269812.7
ENST00000327790.7
ENST00000434325.7
ENST00000586998.3
ENST00000621795.1
ENST00000633125.1
CDS GCA 72 bp TTGTCGCATTTTAACTCATCCTGGTCCCTCTCCCACTaGCTAGACTGGTGGTGGCCTGAGGATTCCAAGAAC +
Preference number: 6 (lower is better)
Translates to: LSHFNSSWSLSH*LDWWWPEDSKN
Trigger: GTTCTTGGAATCCTCAGGCCACCACCAGTCTAGGCAGTGGGAGAGGGACCAGGATGAGTTAAAATGCGACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621795.1
CDS CCA 72 bp AACTCATCCTGGTCCCTCTCCCACTGCCTAGACTGGTaGTGGCCTGAGGATTCCAAGAACAGACTTTATTTG +
Preference number: 6 (lower is better)
Translates to: NSSWSLSHCLDW*WPEDSKNRLYL
Trigger: CAAATAAAGTCTGTTCTTGGAATCCTCAGGCCACCACCAGTCTAGGCAGTGGGAGAGGGACCAGGATGAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621795.1
CDS CCA 72 bp GGCCTGAACCCAAAACCCAGGGCAGACAATCATGTCTaGCAAGCAGGCAACACCACAGTTTCATTTTCACCA +
Preference number: 6 (lower is better)
Translates to: GLNPKPRADNHV*QAGNTTVSFSP
Trigger: TGGTGAAAATGAAACTGTGGTGTTGCCTGCTTGCCAGACATGATTGTCTGCCCTGGGTTTTGGGTTCAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621795.1
CDS CCA 72 bp TTTAACTCATCCTGGTCCCTCTCCCACTGCCTAGACTaGTGGTGGCCTGAGGATTCCAAGAACAGACTTTAT +
Preference number: 6 (lower is better)
Translates to: FNSSWSLSHCLD*WWPEDSKNRLY
Trigger: ATAAAGTCTGTTCTTGGAATCCTCAGGCCACCACCAGTCTAGGCAGTGGGAGAGGGACCAGGATGAGTTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621795.1
CDS CCA 72 bp TTCCAGTCATCTGATAATGGAATAAGAGTCTCTGACTaGGGCTGTGGCATGAGATGCCTCATCCGTGAAGAC +
Preference number: 6 (lower is better)
Translates to: FQSSDNGIRVSD*GCGMRCLIRED
Trigger: GTCTTCACGGATGAGGCATCTCATGCCACAGCCCCAGTCAGAGACTCTTATTCCATTATCAGATGACTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621795.1
CDS GCA 72 bp GTAGGAAACATTCACAACAAATTTATTATTCTCTGCTaGCTGGGGCCACAGACAGCAGATGAGGCAAACAAC +
Preference number: 6 (lower is better)
Translates to: VGNIHNKFIILC*LGPQTADEANN
Trigger: GTTGTTTGCCTCATCTGCTGTCTGTGGCCCCAGGCAGCAGAGAATAATAAATTTGTTGTGAATGTTTCCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621795.1
CDS CCA 72 bp GAAACATTCACAACAAATTTATTATTCTCTGCTGCCTaGGGCCACAGACAGCAGATGAGGCAAACAACAGAC +
Preference number: 6 (lower is better)
Translates to: ETFTTNLLFSAA*GHRQQMRQTTD
Trigger: GTCTGTTGTTTGCCTCATCTGCTGTCTGTGGCCCCAGGCAGCAGAGAATAATAAATTTGTTGTGAATGTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621795.1
CDS GCA 72 bp TTTGTAGGAAACATTCACAACAAATTTATTATTCTCTaGTGCCTGGGGCCACAGACAGCAGATGAGGCAAAC +
Preference number: 6 (lower is better)
Translates to: FVGNIHNKFIIL*CLGPQTADEAN
Trigger: GTTTGCCTCATCTGCTGTCTGTGGCCCCAGGCAGCAGAGAATAATAAATTTGTTGTGAATGTTTCCTACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621795.1
CDS CAA 90 bp AGCAAGAACAAACCCGGGAGAGGGCGTAGGATCATATTTCCAGAGTaGCTACATTATAATATTCTAAACACCCAGTTTAAAACAAAGCAA +
Preference number: 6 (lower is better)
Translates to: SKNKPGRGRRIIFPE*LHYNILNTQFKTKQ
Trigger: TTGCTTTGTTTTAAACTGGGTGTTTAGAATATTATAATGTAGCAACTCTGGAAATATGATCCTACGCCCTCTCCCGGGTTTGTTCTTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621795.1
CDS CAA 72 bp AAACCCGGGAGAGGGCGTAGGATCATATTTCCAGAGTaGCTACATTATAATATTCTAAACACCCAGTTTAAA +
Preference number: 6 (lower is better)
Translates to: KPGRGRRIIFPE*LHYNILNTQFK
Trigger: TTTAAACTGGGTGTTTAGAATATTATAATGTAGCAACTCTGGAAATATGATCCTACGCCCTCTCCCGGGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621795.1