RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PLEKHM2 (Homo sapiens)

Ensembl gene IDs: ENSG00000116786

Ensembl transcript IDs: ENST00000375793.2, ENST00000375799.8, ENST00000462455.1, ENST00000477849.1, ENST00000642363.1

Found 682 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGGAGGAGGGCGTGCATCCGCAGAGCCCACAGGGCTCGGACCCTCTaGCCCCAGCGACCTCCATTCGCTACCTGTCGGGCAGGATGCCCA +
Preference number: 1 (lower is better)
Translates to: GRRACIRRAHRARTL*PQRPPFATCRAGCP
Trigger: TGGGCATCCTGCCCGACAGGTAGCGAATGGAGGTCGCTGGGGGCAGAGGGTCCGAGCCCTGTGGGCTCTGCGGATGCACGCCCTCCTCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
3UTR GCA 90 bp CCCAGCGACCTCCATTCGCTACCTGTCGGGCAGGATGCCCAGGGGTaGCGGGCACCTGATCTGGATCCCTGGAGTGGAGGGACCCTGTCT +
Preference number: 1 (lower is better)
Translates to: PSDLHSLPVGQDAQG*RAPDLDPWSGGTLS
Trigger: AGACAGGGTCCCTCCACTCCAGGGATCCAGATCAGGTGCCCGGCACCCCTGGGCATCCTGCCCGACAGGTAGCGAATGGAGGTCGCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
3UTR CCA 90 bp GGCTCCCGACAGCATGACAACAGCCGTGACAGTGTGCCTGCCGGCTaGCGTGCCTTCCTTTCCTGCCCACCAGGGACGCCAACCAGCTCT +
Preference number: 1 (lower is better)
Translates to: GSRQHDNSRDSVPAG*RAFLSCPPGTPTSS
Trigger: AGAGCTGGTTGGCGTCCCTGGTGGGCAGGAAAGGAAGGCACGCCAGCCGGCAGGCACACTGTCACGGCTGTTGTCATGCTGTCGGGAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
3UTR GCA 90 bp TCCCTGGAGTGGAGGGACCCTGTCTTAAGCCACACTCGGTGGTTCTaGCGCCCAGGGCAGGGGTGGACTGTAGGCTCCCGACAGCATGAC +
Preference number: 1 (lower is better)
Translates to: SLEWRDPVLSHTRWF*RPGQGWTVGSRQHD
Trigger: GTCATGCTGTCGGGAGCCTACAGTCCACCCCTGCCCTGGGCGGCAGAACCACCGAGTGTGGCTTAAGACAGGGTCCCTCCACTCCAGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
3UTR CCA 90 bp TCTGGATCCCTGGAGTGGAGGGACCCTGTCTTAAGCCACACTCGGTaGTTCTGCCGCCCAGGGCAGGGGTGGACTGTAGGCTCCCGACAG +
Preference number: 1 (lower is better)
Translates to: SGSLEWRDPVLSHTR*FCRPGQGWTVGSRQ
Trigger: CTGTCGGGAGCCTACAGTCCACCCCTGCCCTGGGCGGCAGAACCACCGAGTGTGGCTTAAGACAGGGTCCCTCCACTCCAGGGATCCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
3UTR TCA 90 bp CCATTCGCTACCTGTCGGGCAGGATGCCCAGGGGTGCCGGGCACCTaGTCTGGATCCCTGGAGTGGAGGGACCCTGTCTTAAGCCACACT +
Preference number: 1 (lower is better)
Translates to: PFATCRAGCPGVPGT*SGSLEWRDPVLSHT
Trigger: AGTGTGGCTTAAGACAGGGTCCCTCCACTCCAGGGATCCAGATCAGGTGCCCGGCACCCCTGGGCATCCTGCCCGACAGGTAGCGAATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
3UTR TCA 90 bp AGATGGATGGTGTTCTCGGTGCCACTCGGCAGAAATTCTGCAGACTaGGGCGGAGGCCCGGGAGGAGGGCGTGCATCCGCAGAGCCCACA +
Preference number: 1 (lower is better)
Translates to: RWMVFSVPLGRNSAD*GGGPGGGRASAEPT
Trigger: TGTGGGCTCTGCGGATGCACGCCCTCCTCCCGGGCCTCCGCCTCAGTCTGCAGAATTTCTGCCGAGTGGCACCGAGAACACCATCCATCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
3UTR GCA 90 bp CCCTCCTGGTTCTTTTGTTCGTCCTTAGATGGATGGTGTTCTCGGTaGCACTCGGCAGAAATTCTGCAGACTGAGGCGGAGGCCCGGGAG +
Preference number: 1 (lower is better)
Translates to: PSWFFCSSLDGWCSR*HSAEILQTEAEARE
Trigger: CTCCCGGGCCTCCGCCTCAGTCTGCAGAATTTCTGCCGAGTGGCACCGAGAACACCATCCATCTAAGGACGAACAAAAGAACCAGGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
3UTR-3UTR TCA 90 bp CAGAGCCCACAGGGCTCGGACCCTCTGCCCCCAGCGACCTCCATTCGCTACCTGGGGGTGCCGGGCACCTaGTCTGGATCCCTGGAGTGG +
Preference number: 2 (lower is better)
Translates to: QSPQGSDPLPPATSIRYLGVPGT*SGSLEW
Trigger: CCACTCCAGGGATCCAGATCAGGTGCCCGGCACCCC...CAGGTAGCGAATGGAGGTCGCTGGGGGCAGAGGGTCCGAGCCCTGTGGGCTCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
3UTR-3UTR GCA 90 bp CGGACCCTCTGCCCCCAGCGACCTCCATTCGCTACCTGTCGGGCAGGATGCCCAACAGCCGTGACAGTGTaGCTGCCGGCTGGCGTGCCT +
Preference number: 2 (lower is better)
Translates to: RTLCPQRPPFATCRAGCPTAVTV*LPAGVP
Trigger: AGGCACGCCAGCCGGCAGGCACACTGTCACGGCTGT...TGGGCATCCTGCCCGACAGGTAGCGAATGGAGGTCGCTGGGGGCAGAGGGTCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
3UTR-3UTR GCA 90 bp GTTCTCGGTGCCACTCGGCAGAAATTCTGCAGACTGAGGCGGAGGCCCGGGAGGACCTGTCGGGCAGGATaGCCAGGGGTGCCGGGCACC +
Preference number: 2 (lower is better)
Translates to: VLGATRQKFCRLRRRPGRTCRAG*PGVPGT
Trigger: GGTGCCCGGCACCCCTGGGCATCCTGCCCGACAGGT...CCTCCCGGGCCTCCGCCTCAGTCTGCAGAATTTCTGCCGAGTGGCACCGAGAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
3UTR-3UTR CCA 90 bp CAGAGCCCACAGGGCTCGGACCCTCTGCCCCCAGCGACCTCCATTCGCTACCTGAGTGTGCCTGCCGGCTaGCGTGCCTTCCTTTCCTGC +
Preference number: 2 (lower is better)
Translates to: QSPQGSDPLPPATSIRYLSVPAG*RAFLSC
Trigger: GCAGGAAAGGAAGGCACGCCAGCCGGCAGGCACACT...CAGGTAGCGAATGGAGGTCGCTGGGGGCAGAGGGTCCGAGCCCTGTGGGCTCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
3UTR-3UTR GCA 90 bp CCACCCCCTTTGCTCCTCGGTGCTACAGGCACTGCCGGGTTGAGGGGACAGGCAGCAGGACTGTGGGCATaGAGAGCCTCCTGGCAGCCA +
Preference number: 2 (lower is better)
Translates to: PPPLLLGATGTAGLRGQAAGLWA*RASWQP
Trigger: TGGCTGCCAGGAGGCTCTGCATGCCCACAGTCCTGC...TGCCTGTCCCCTCAACCCGGCAGTGCCTGTAGCACCGAGGAGCAAAGGGGGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
3UTR-3UTR CCA 90 bp CTCGGACCCTCTGCCCCCAGCGACCTCCATTCGCTACCTGTCGGGCAGGATGCCTTAAGCCACACTCGGTaGTTCTGCCGCCCAGGGCAG +
Preference number: 2 (lower is better)
Translates to: LGPSAPSDLHSLPVGQDALSHTR*FCRPGQ
Trigger: CTGCCCTGGGCGGCAGAACCACCGAGTGTGGCTTAA...GGCATCCTGCCCGACAGGTAGCGAATGGAGGTCGCTGGGGGCAGAGGGTCCGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
3UTR-3UTR CCA 90 bp GTTCTCGGTGCCACTCGGCAGAAATTCTGCAGACTGAGGCGGAGGCCCGGGAGGAGTGTGCCTGCCGGCTaGCGTGCCTTCCTTTCCTGC +
Preference number: 2 (lower is better)
Translates to: VLGATRQKFCRLRRRPGRSVPAG*RAFLSC
Trigger: GCAGGAAAGGAAGGCACGCCAGCCGGCAGGCACACT...CCTCCCGGGCCTCCGCCTCAGTCTGCAGAATTTCTGCCGAGTGGCACCGAGAAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
3UTR-3UTR CCA 90 bp GGTGTTCTCGGTGCCACTCGGCAGAAATTCTGCAGACTGAGGCGGAGGCCCGGGGCCGGGCACCTGATCTaGATCCCTGGAGTGGAGGGA +
Preference number: 2 (lower is better)
Translates to: GVLGATRQKFCRLRRRPGAGHLI*IPGVEG
Trigger: TCCCTCCACTCCAGGGATCCAGATCAGGTGCCCGGC...CCCGGGCCTCCGCCTCAGTCTGCAGAATTTCTGCCGAGTGGCACCGAGAACACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
3UTR-3UTR TCA 90 bp TCCCGCTTCCCCACGTGGCCAGGAGAGTGTTCAAACACGAACAAGGATGGCTGGGGGGTGCCGGGCACCTaGTCTGGATCCCTGGAGTGG +
Preference number: 2 (lower is better)
Translates to: SRFPTWPGECSNTNKDGWGVPGT*SGSLEW
Trigger: CCACTCCAGGGATCCAGATCAGGTGCCCGGCACCCC...CCAGCCATCCTTGTTCGTGTTTGAACACTCTCCTGGCCACGTGGGGAAGCGGGA
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
3UTR-3UTR TCA 90 bp GTCAGAAGATGTCAACATGGATGCCAGGCTGGTGGGCTCCGCCCTTCTCCAAGCGGGGTGCCGGGCACCTaGTCTGGATCCCTGGAGTGG +
Preference number: 2 (lower is better)
Translates to: VRRCQHGCQAGGLRPSPSGVPGT*SGSLEW
Trigger: CCACTCCAGGGATCCAGATCAGGTGCCCGGCACCCC...GCTTGGAGAAGGGCGGAGCCCACCAGCCTGGCATCCATGTTGACATCTTCTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
3UTR-3UTR CCA 90 bp CTCGGTGCCACTCGGCAGAAATTCTGCAGACTGAGGCGGAGGCCCGGGAGGAGGCCTGATCTGGATCCCTaGAGTGGAGGGACCCTGTCT +
Preference number: 2 (lower is better)
Translates to: LGATRQKFCRLRRRPGRRPDLDP*SGGTLS
Trigger: AGACAGGGTCCCTCCACTCCAGGGATCCAGATCAGG...CCTCCTCCCGGGCCTCCGCCTCAGTCTGCAGAATTTCTGCCGAGTGGCACCGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
3UTR-3UTR GCA 90 bp TCCCGCTTCCCCACGTGGCCAGGAGAGTGTTCAAACACGAACAAGGATGGCTGGACAGCCGTGACAGTGTaGCTGCCGGCTGGCGTGCCT +
Preference number: 2 (lower is better)
Translates to: SRFPTWPGECSNTNKDGWTAVTV*LPAGVP
Trigger: AGGCACGCCAGCCGGCAGGCACACTGTCACGGCTGT...CCAGCCATCCTTGTTCGTGTTTGAACACTCTCCTGGCCACGTGGGGAAGCGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
3UTR-3UTR GCA 90 bp CAGTCAGAAGATGTCAACATGGATGCCAGGCTGGTGGGCTCCGCCCTTCTCCAACACACTCGGTGGTTCTaGCGCCCAGGGCAGGGGTGG +
Preference number: 2 (lower is better)
Translates to: QSEDVNMDARLVGSALLQHTRWF*RPGQGW
Trigger: CCACCCCTGCCCTGGGCGGCAGAACCACCGAGTGTG...TTGGAGAAGGGCGGAGCCCACCAGCCTGGCATCCATGTTGACATCTTCTGACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
3UTR-3UTR GCA 90 bp CCGCCCTCCTGGTTCTTTTGTTCGTCCTTAGATGGATGGTGTTCTCGGTGCCACACCTGTCGGGCAGGATaGCCAGGGGTGCCGGGCACC +
Preference number: 2 (lower is better)
Translates to: PPSWFFCSSLDGWCSRCHTCRAG*PGVPGT
Trigger: GGTGCCCGGCACCCCTGGGCATCCTGCCCGACAGGT...GTGGCACCGAGAACACCATCCATCTAAGGACGAACAAAAGAACCAGGAGGGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
3UTR-3UTR GCA 90 bp GCAGTGATGGAGCTAGGAGGAGGAAACATGCGCAGACACCCCGTGTTCCCGCTTAGGGCTCGGACCCTCTaGCCCCAGCGACCTCCATTC +
Preference number: 2 (lower is better)
Translates to: AVMELGGGNMRRHPVFPLRARTL*PQRPPF
Trigger: GAATGGAGGTCGCTGGGGGCAGAGGGTCCGAGCCCT...AAGCGGGAACACGGGGTGTCTGCGCATGTTTCCTCCTCCTAGCTCCATCACTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
3UTR-3UTR CCA 90 bp CTTCCCCAGGAGGCTCTTGACGAAACTCTAGGGAAGGGCCTGGCTCCAGCCAAGGCCGGGCACCTGATCTaGATCCCTGGAGTGGAGGGA +
Preference number: 2 (lower is better)
Translates to: LPQEALDETLGKGLAPAKAGHLI*IPGVEG
Trigger: TCCCTCCACTCCAGGGATCCAGATCAGGTGCCCGGC...CTTGGCTGGAGCCAGGCCCTTCCCTAGAGTTTCGTCAAGAGCCTCCTGGGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
3UTR-3UTR GCA 90 bp GCAGTGATGGAGCTAGGAGGAGGAAACATGCGCAGACACCCCGTGTTCCCGCTTCGTGCCTTCCTTTCCTaGCCACCAGGGACGCCAACC +
Preference number: 2 (lower is better)
Translates to: AVMELGGGNMRRHPVFPLRAFLS*PPGTPT
Trigger: GGTTGGCGTCCCTGGTGGGCAGGAAAGGAAGGCACG...AAGCGGGAACACGGGGTGTCTGCGCATGTTTCCTCCTCCTAGCTCCATCACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
3UTR-3UTR GCA 90 bp CCTGGCTCCAGCCAAGCAGGGGACAGTCAGAAGATGTCAACATGGATGCCAGGCCGTGCCTTCCTTTCCTaGCCACCAGGGACGCCAACC +
Preference number: 2 (lower is better)
Translates to: PGSSQAGDSQKMSTWMPGRAFLS*PPGTPT
Trigger: GGTTGGCGTCCCTGGTGGGCAGGAAAGGAAGGCACG...GCCTGGCATCCATGTTGACATCTTCTGACTGTCCCCTGCTTGGCTGGAGCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
3UTR-3UTR GCA 90 bp CCTGGCTCCAGCCAAGCAGGGGACAGTCAGAAGATGTCAACATGGATGCCAGGCCAGGATGCCCAGGGGTaGCGGGCACCTGATCTGGAT +
Preference number: 2 (lower is better)
Translates to: PGSSQAGDSQKMSTWMPGQDAQG*RAPDLD
Trigger: ATCCAGATCAGGTGCCCGGCACCCCTGGGCATCCTG...GCCTGGCATCCATGTTGACATCTTCTGACTGTCCCCTGCTTGGCTGGAGCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
3UTR-3UTR GCA 90 bp GCAGTGATGGAGCTAGGAGGAGGAAACATGCGCAGACACCCCGTGTTCCCGCTTCAGGATGCCCAGGGGTaGCGGGCACCTGATCTGGAT +
Preference number: 2 (lower is better)
Translates to: AVMELGGGNMRRHPVFPLQDAQG*RAPDLD
Trigger: ATCCAGATCAGGTGCCCGGCACCCCTGGGCATCCTG...AAGCGGGAACACGGGGTGTCTGCGCATGTTTCCTCCTCCTAGCTCCATCACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
3UTR-3UTR GCA 90 bp CAGTCAGAAGATGTCAACATGGATGCCAGGCTGGTGGGCTCCGCCCTTCTCCAACGGTGCTACAGGCACTaGCGGGTTGAGGGGACAGGC +
Preference number: 2 (lower is better)
Translates to: QSEDVNMDARLVGSALLQRCYRH*RVEGTG
Trigger: GCCTGTCCCCTCAACCCGGCAGTGCCTGTAGCACCG...TTGGAGAAGGGCGGAGCCCACCAGCCTGGCATCCATGTTGACATCTTCTGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
3UTR-3UTR TCA 90 bp GCAGGCAGCTGTGTGCGCAGTGATGGAGCTAGGAGGAGGAAACATGCGCAGACAAGAAATTCTGCAGACTaGGGCGGAGGCCCGGGAGGA +
Preference number: 2 (lower is better)
Translates to: AGSCVRSDGARRRKHAQTRNSAD*GGGPGG
Trigger: TCCTCCCGGGCCTCCGCCTCAGTCTGCAGAATTTCT...TGTCTGCGCATGTTTCCTCCTCCTAGCTCCATCACTGCGCACACAGCTGCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
3UTR-3UTR GCA 90 bp CTTCCCCAGGAGGCTCTTGACGAAACTCTAGGGAAGGGCCTGGCTCCAGCCAAGAGATGTCAACATGGATaGCAGGCTGGTGGGCTCCGC +
Preference number: 2 (lower is better)
Translates to: LPQEALDETLGKGLAPAKRCQHG*QAGGLR
Trigger: GCGGAGCCCACCAGCCTGGCATCCATGTTGACATCT...CTTGGCTGGAGCCAGGCCCTTCCCTAGAGTTTCGTCAAGAGCCTCCTGGGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
3UTR-3UTR CCA 90 bp TGTGTGCGCAGTGATGGAGCTAGGAGGAGGAAACATGCGCAGACACCCCGTGTTACGAACAAGGATGGCTaGGCACTCAGGGCCCCAGCC +
Preference number: 2 (lower is better)
Translates to: CVRSDGARRRKHAQTPRVTNKDG*ALRAPA
Trigger: GGCTGGGGCCCTGAGTGCCCAGCCATCCTTGTTCGT...AACACGGGGTGTCTGCGCATGTTTCCTCCTCCTAGCTCCATCACTGCGCACACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
3UTR-3UTR GCA 90 bp GCAGTGATGGAGCTAGGAGGAGGAAACATGCGCAGACACCCCGTGTTCCCGCTTACTCGGCAGAAATTCTaGAGACTGAGGCGGAGGCCC +
Preference number: 2 (lower is better)
Translates to: AVMELGGGNMRRHPVFPLTRQKF*RLRRRP
Trigger: GGGCCTCCGCCTCAGTCTGCAGAATTTCTGCCGAGT...AAGCGGGAACACGGGGTGTCTGCGCATGTTTCCTCCTCCTAGCTCCATCACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
3UTR-3UTR GCA 90 bp CCTGGCTCCAGCCAAGCAGGGGACAGTCAGAAGATGTCAACATGGATGCCAGGCAGGCAGGCAGCTGTGTaGGCAGTGATGGAGCTAGGA +
Preference number: 2 (lower is better)
Translates to: PGSSQAGDSQKMSTWMPGRQAAV*AVMELG
Trigger: TCCTAGCTCCATCACTGCGCACACAGCTGCCTGCCT...GCCTGGCATCCATGTTGACATCTTCTGACTGTCCCCTGCTTGGCTGGAGCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
3UTR-3UTR GCA 90 bp CAGTCAGAAGATGTCAACATGGATGCCAGGCTGGTGGGCTCCGCCCTTCTCCAACCCTTTGCTCCTCGGTaGTACAGGCACTGCCGGGTT +
Preference number: 2 (lower is better)
Translates to: QSEDVNMDARLVGSALLQPFAPR*YRHCRV
Trigger: AACCCGGCAGTGCCTGTAGCACCGAGGAGCAAAGGG...TTGGAGAAGGGCGGAGCCCACCAGCCTGGCATCCATGTTGACATCTTCTGACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
3UTR-3UTR GCA 90 bp CTCCAGCCAAGCAGGGGACAGTCAGAAGATGTCAACATGGATGCCAGGCTGGTGCCCATCCACCCCCTTTaGTCCTCGGTGCTACAGGCA +
Preference number: 2 (lower is better)
Translates to: LQPSRGQSEDVNMDARLVPIHPL*SSVLQA
Trigger: TGCCTGTAGCACCGAGGAGCAAAGGGGGTGGATGGG...CACCAGCCTGGCATCCATGTTGACATCTTCTGACTGTCCCCTGCTTGGCTGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
3UTR-3UTR CCA 90 bp CCACCCCCTTTGCTCCTCGGTGCTACAGGCACTGCCGGGTTGAGGGGACAGGCATTGTTCGTCCTTAGATaGATGGTGTTCTCGGTGCCA +
Preference number: 2 (lower is better)
Translates to: PPPLLLGATGTAGLRGQALFVLR*MVFSVP
Trigger: TGGCACCGAGAACACCATCCATCTAAGGACGAACAA...TGCCTGTCCCCTCAACCCGGCAGTGCCTGTAGCACCGAGGAGCAAAGGGGGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
3UTR-3UTR CCA 90 bp CCTGGCTCCAGCCAAGCAGGGGACAGTCAGAAGATGTCAACATGGATGCCAGGCAAACACGAACAAGGATaGCTGGGCACTCAGGGCCCC +
Preference number: 2 (lower is better)
Translates to: PGSSQAGDSQKMSTWMPGKHEQG*LGTQGP
Trigger: GGGGCCCTGAGTGCCCAGCCATCCTTGTTCGTGTTT...GCCTGGCATCCATGTTGACATCTTCTGACTGTCCCCTGCTTGGCTGGAGCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
3UTR-3UTR GCA 90 bp CTCCAGCCAAGCAGGGGACAGTCAGAAGATGTCAACATGGATGCCAGGCTGGTGACTCGGCAGAAATTCTaGAGACTGAGGCGGAGGCCC +
Preference number: 2 (lower is better)
Translates to: LQPSRGQSEDVNMDARLVTRQKF*RLRRRP
Trigger: GGGCCTCCGCCTCAGTCTGCAGAATTTCTGCCGAGT...CACCAGCCTGGCATCCATGTTGACATCTTCTGACTGTCCCCTGCTTGGCTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
3UTR-3UTR CCA 90 bp GCAGGCAGCTGTGTGCGCAGTGATGGAGCTAGGAGGAGGAAACATGCGCAGACATCTGGATCCCTGGAGTaGAGGGACCCTGTCTTAAGC +
Preference number: 2 (lower is better)
Translates to: AGSCVRSDGARRRKHAQTSGSLE*RDPVLS
Trigger: GCTTAAGACAGGGTCCCTCCACTCCAGGGATCCAGA...TGTCTGCGCATGTTTCCTCCTCCTAGCTCCATCACTGCGCACACAGCTGCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
3UTR-3UTR CCA 90 bp CAGGCAGCTGTGTGCGCAGTGATGGAGCTAGGAGGAGGAAACATGCGCAGACACGGGGTCCCGCCCTCCTaGTTCTTTTGTTCGTCCTTA +
Preference number: 2 (lower is better)
Translates to: QAAVCAVMELGGGNMRRHGVPPS*FFCSSL
Trigger: TAAGGACGAACAAAAGAACCAGGAGGGCGGGACCCC...GTGTCTGCGCATGTTTCCTCCTCCTAGCTCCATCACTGCGCACACAGCTGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
3UTR-3UTR CCA 90 bp CCTGGCTCCAGCCAAGCAGGGGACAGTCAGAAGATGTCAACATGGATGCCAGGCGGGGTCCCGCCCTCCTaGTTCTTTTGTTCGTCCTTA +
Preference number: 2 (lower is better)
Translates to: PGSSQAGDSQKMSTWMPGGVPPS*FFCSSL
Trigger: TAAGGACGAACAAAAGAACCAGGAGGGCGGGACCCC...GCCTGGCATCCATGTTGACATCTTCTGACTGTCCCCTGCTTGGCTGGAGCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
3UTR-3UTR CCA 90 bp GCAGGCAGCTGTGTGCGCAGTGATGGAGCTAGGAGGAGGAAACATGCGCAGACAGGGGTCCCGCCCTCCTaGTTCTTTTGTTCGTCCTTA +
Preference number: 2 (lower is better)
Translates to: AGSCVRSDGARRRKHAQTGVPPS*FFCSSL
Trigger: TAAGGACGAACAAAAGAACCAGGAGGGCGGGACCCC...TGTCTGCGCATGTTTCCTCCTCCTAGCTCCATCACTGCGCACACAGCTGCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
3UTR-3UTR GCA 90 bp GTCAGAAGATGTCAACATGGATGCCAGGCTGGTGGGCTCCGCCCTTCTCCAAGCGGATGGTGTTCTCGGTaGCACTCGGCAGAAATTCTG +
Preference number: 2 (lower is better)
Translates to: VRRCQHGCQAGGLRPSPSGWCSR*HSAEIL
Trigger: CAGAATTTCTGCCGAGTGGCACCGAGAACACCATCC...GCTTGGAGAAGGGCGGAGCCCACCAGCCTGGCATCCATGTTGACATCTTCTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
3UTR-3UTR CCA 90 bp CTCCTGGTTCTTTTGTTCGTCCTTAGATGGATGGTGTTCTCGGTGCCACTCGGCTTAAGCCACACTCGGTaGTTCTGCCGCCCAGGGCAG +
Preference number: 2 (lower is better)
Translates to: LLVLLFVLRWMVFSVPLGLSHTR*FCRPGQ
Trigger: CTGCCCTGGGCGGCAGAACCACCGAGTGTGGCTTAA...GCCGAGTGGCACCGAGAACACCATCCATCTAAGGACGAACAAAAGAACCAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
3UTR-3UTR CCA 90 bp CCTGGCTCCAGCCAAGCAGGGGACAGTCAGAAGATGTCAACATGGATGCCAGGCTCGTCCTTAGATGGATaGTGTTCTCGGTGCCACTCG +
Preference number: 2 (lower is better)
Translates to: PGSSQAGDSQKMSTWMPGSSLDG*CSRCHS
Trigger: CGAGTGGCACCGAGAACACCATCCATCTAAGGACGA...GCCTGGCATCCATGTTGACATCTTCTGACTGTCCCCTGCTTGGCTGGAGCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
3UTR-3UTR CCA 90 bp CTTCCCCAGGAGGCTCTTGACGAAACTCTAGGGAAGGGCCTGGCTCCAGCCAAGTTGTTCGTCCTTAGATaGATGGTGTTCTCGGTGCCA +
Preference number: 2 (lower is better)
Translates to: LPQEALDETLGKGLAPAKLFVLR*MVFSVP
Trigger: TGGCACCGAGAACACCATCCATCTAAGGACGAACAA...CTTGGCTGGAGCCAGGCCCTTCCCTAGAGTTTCGTCAAGAGCCTCCTGGGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
3UTR GCA 72 bp GCGTGCATCCGCAGAGCCCACAGGGCTCGGACCCTCTaGCCCCAGCGACCTCCATTCGCTACCTGTCGGGCA +
Preference number: 3 (lower is better)
Translates to: ACIRRAHRARTL*PQRPPFATCRA
Trigger: TGCCCGACAGGTAGCGAATGGAGGTCGCTGGGGGCAGAGGGTCCGAGCCCTGTGGGCTCTGCGGATGCACGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
3UTR GCA 72 bp CTCCATTCGCTACCTGTCGGGCAGGATGCCCAGGGGTaGCGGGCACCTGATCTGGATCCCTGGAGTGGAGGG +
Preference number: 3 (lower is better)
Translates to: LHSLPVGQDAQG*RAPDLDPWSGG
Trigger: CCCTCCACTCCAGGGATCCAGATCAGGTGCCCGGCACCCCTGGGCATCCTGCCCGACAGGTAGCGAATGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
3UTR TCA 72 bp ACCTGTCGGGCAGGATGCCCAGGGGTGCCGGGCACCTaGTCTGGATCCCTGGAGTGGAGGGACCCTGTCTTA +
Preference number: 3 (lower is better)
Translates to: TCRAGCPGVPGT*SGSLEWRDPVL
Trigger: TAAGACAGGGTCCCTCCACTCCAGGGATCCAGATCAGGTGCCCGGCACCCCTGGGCATCCTGCCCGACAGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
3UTR TCA 72 bp GTGTTCTCGGTGCCACTCGGCAGAAATTCTGCAGACTaGGGCGGAGGCCCGGGAGGAGGGCGTGCATCCGCA +
Preference number: 3 (lower is better)
Translates to: VFSVPLGRNSAD*GGGPGGGRASA
Trigger: TGCGGATGCACGCCCTCCTCCCGGGCCTCCGCCTCAGTCTGCAGAATTTCTGCCGAGTGGCACCGAGAACAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
3UTR CCA 72 bp CAGCATGACAACAGCCGTGACAGTGTGCCTGCCGGCTaGCGTGCCTTCCTTTCCTGCCCACCAGGGACGCCA +
Preference number: 3 (lower is better)
Translates to: QHDNSRDSVPAG*RAFLSCPPGTP
Trigger: TGGCGTCCCTGGTGGGCAGGAAAGGAAGGCACGCCAGCCGGCAGGCACACTGTCACGGCTGTTGTCATGCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
3UTR CCA 72 bp CTGGAGTGGAGGGACCCTGTCTTAAGCCACACTCGGTaGTTCTGCCGCCCAGGGCAGGGGTGGACTGTAGGC +
Preference number: 3 (lower is better)
Translates to: LEWRDPVLSHTR*FCRPGQGWTVG
Trigger: GCCTACAGTCCACCCCTGCCCTGGGCGGCAGAACCACCGAGTGTGGCTTAAGACAGGGTCCCTCCACTCCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
3UTR GCA 72 bp ATGGATGGTGTTCTCGGTGCCACTCGGCAGAAATTCTaGAGACTGAGGCGGAGGCCCGGGAGGAGGGCGTGC +
Preference number: 3 (lower is better)
Translates to: MDGVLGATRQKF*RLRRRPGRRAC
Trigger: GCACGCCCTCCTCCCGGGCCTCCGCCTCAGTCTGCAGAATTTCTGCCGAGTGGCACCGAGAACACCATCCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
3UTR CCA 72 bp TCCAGCCAAGCAGGGGACAGTCAGAAGATGTCAACATaGATGCCAGGCTGGTGGGCTCCGCCCTTCTCCAAG +
Preference number: 3 (lower is better)
Translates to: SSQAGDSQKMST*MPGWWAPPFSK
Trigger: CTTGGAGAAGGGCGGAGCCCACCAGCCTGGCATCCATGTTGACATCTTCTGACTGTCCCCTGCTTGGCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
3UTR-3UTR CAA 90 bp CTCCAGCCAAGCAGGGGACAGTCAGAAGATGTCAACATGGATGCCAGGCTGGTGGCCCTCCTGGTTCTTTaGTTCGTCCTTAGATGGATG +
Preference number: 3 (lower is better)
Translates to: LQPSRGQSEDVNMDARLVALLVL*FVLRWM
Trigger: CATCCATCTAAGGACGAACAAAAGAACCAGGAGGGC...CACCAGCCTGGCATCCATGTTGACATCTTCTGACTGTCCCCTGCTTGGCTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
3UTR CCA 72 bp CCGCCCTCCTGGTTCTTTTGTTCGTCCTTAGATGGATaGTGTTCTCGGTGCCACTCGGCAGAAATTCTGCAG +
Preference number: 3 (lower is better)
Translates to: PPSWFFCSSLDG*CSRCHSAEILQ
Trigger: CTGCAGAATTTCTGCCGAGTGGCACCGAGAACACCATCCATCTAAGGACGAACAAAAGAACCAGGAGGGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
3UTR CCA 72 bp GGTCCCGCCCTCCTGGTTCTTTTGTTCGTCCTTAGATaGATGGTGTTCTCGGTGCCACTCGGCAGAAATTCT +
Preference number: 3 (lower is better)
Translates to: GPALLVLLFVLR*MVFSVPLGRNS
Trigger: AGAATTTCTGCCGAGTGGCACCGAGAACACCATCCATCTAAGGACGAACAAAAGAACCAGGAGGGCGGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
3UTR GCA 72 bp TTCTTTTGTTCGTCCTTAGATGGATGGTGTTCTCGGTaGCACTCGGCAGAAATTCTGCAGACTGAGGCGGAG +
Preference number: 3 (lower is better)
Translates to: FFCSSLDGWCSR*HSAEILQTEAE
Trigger: CTCCGCCTCAGTCTGCAGAATTTCTGCCGAGTGGCACCGAGAACACCATCCATCTAAGGACGAACAAAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR TCA 90 bp GCCCACAGGGCTCGGACCCTCTGCCCCCAGCGACCTCCATTCGCTACCTGTCGGCCGAGAGCAGAGGGATaGCGTCGGTGCGGTCCGGGT +
Preference number: 4 (lower is better)
Translates to: AHRARTLCPQRPPFATCRPRAEG*RRCGPG
Trigger: ACCCGGACCGCACCGACGTCATCCCTCTGCTCTCGG...CCGACAGGTAGCGAATGGAGGTCGCTGGGGGCAGAGGGTCCGAGCCCTGTGGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR TCA 90 bp GCCCACAGGGCTCGGACCCTCTGCCCCCAGCGACCTCCATTCGCTACCTGTCGGCGGTGGAGACGGCGCTaGTGTCGCCCAGCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: AHRARTLCPQRPPFATCRRWRRR*CRPAWL
Trigger: CAGCCAAGCTGGGCGACATCAGCGCCGTCTCCACCG...CCGACAGGTAGCGAATGGAGGTCGCTGGGGGCAGAGGGTCCGAGCCCTGTGGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp GCCCACAGGGCTCGGACCCTCTGCCCCCAGCGACCTCCATTCGCTACCTGTCGGGGCTGCGCCCCAGGTTaGTGGCCACGTGCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: AHRARTLCPQRPPFATCRGCAPG*WPRAAA
Trigger: TGCTGCAGCACGTGGCCACCAACCTGGGGCGCAGCC...CCGACAGGTAGCGAATGGAGGTCGCTGGGGGCAGAGGGTCCGAGCCCTGTGGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp GCCCACAGGGCTCGGACCCTCTGCCCCCAGCGACCTCCATTCGCTACCTGTCGGGCTCGCTGCTCTCCGTaGTGCTGCTCGGCCCCTCTC +
Preference number: 4 (lower is better)
Translates to: AHRARTLCPQRPPFATCRARCSP*CCSAPL
Trigger: GAGAGGGGCCGAGCAGCACCACGGAGAGCAGCGAGC...CCGACAGGTAGCGAATGGAGGTCGCTGGGGGCAGAGGGTCCGAGCCCTGTGGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR TCA 90 bp CTCGGACCCTCTGCCCCCAGCGACCTCCATTCGCTACCTGTCGGGCAGGATGCCCTGCCGGCTCCTCGTTaGAGGGGTTCTGGCGCTGGG +
Preference number: 4 (lower is better)
Translates to: LGPSAPSDLHSLPVGQDALPAPR*RGSGAG
Trigger: CCCAGCGCCAGAACCCCTTCAACGAGGAGCCGGCAG...GGCATCCTGCCCGACAGGTAGCGAATGGAGGTCGCTGGGGGCAGAGGGTCCGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR TCA 90 bp GTGCATCCGCAGAGCCCACAGGGCTCGGACCCTCTGCCCCCAGCGACCTCCATTGGGGTGCCGGGCACCTaGTCTGGATCCCTGGAGTGG +
Preference number: 4 (lower is better)
Translates to: VHPQSPQGSDPLPPATSIGVPGT*SGSLEW
Trigger: CCACTCCAGGGATCCAGATCAGGTGCCCGGCACCCC...AATGGAGGTCGCTGGGGGCAGAGGGTCCGAGCCCTGTGGGCTCTGCGGATGCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp CGGACCCTCTGCCCCCAGCGACCTCCATTCGCTACCTGTCGGGCAGGATGCCCAGCTCGGAGCGCTCGCTaGTCTCCGTGGTGCTGCTCG +
Preference number: 4 (lower is better)
Translates to: RTLCPQRPPFATCRAGCPARSAR*SPWCCS
Trigger: CGAGCAGCACCACGGAGAGCAGCGAGCGCTCCGAGC...TGGGCATCCTGCCCGACAGGTAGCGAATGGAGGTCGCTGGGGGCAGAGGGTCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp CAGAGCCCACAGGGCTCGGACCCTCTGCCCCCAGCGACCTCCATTCGCTACCTGCGGTTGGCCAAGCCCTaGAGGGTCATGGTGGCCGCC +
Preference number: 4 (lower is better)
Translates to: QSPQGSDPLPPATSIRYLRLAKP*RVMVAA
Trigger: GGCGGCCACCATGACCCTGCAGGGCTTGGCCAACCG...CAGGTAGCGAATGGAGGTCGCTGGGGGCAGAGGGTCCGAGCCCTGTGGGCTCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp ACAGCCGTGACAGTGTGCCTGCCGGCTGGCGTGCCTTCCTTTCCTGCCCACCAGACCTGTCGGGCAGGATaGCCAGGGGTGCCGGGCACC +
Preference number: 4 (lower is better)
Translates to: TAVTVCLPAGVPSFPAHQTCRAG*PGVPGT
Trigger: GGTGCCCGGCACCCCTGGGCATCCTGCCCGACAGGT...CTGGTGGGCAGGAAAGGAAGGCACGCCAGCCGGCAGGCACACTGTCACGGCTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp GCCCACAGGGCTCGGACCCTCTGCCCCCAGCGACCTCCATTCGCTACCTGTCGGTGCGCCCCAGGTTGGTaGCCACGTGCTGCAGCACCT +
Preference number: 4 (lower is better)
Translates to: AHRARTLCPQRPPFATCRCAPGW*PRAAAP
Trigger: AGGTGCTGCAGCACGTGGCCACCAACCTGGGGCGCA...CCGACAGGTAGCGAATGGAGGTCGCTGGGGGCAGAGGGTCCGAGCCCTGTGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp CTCGGACCCTCTGCCCCCAGCGACCTCCATTCGCTACCTGTCGGGCAGGATGCCAGCAGTGGCAGGGCGTaGGGCCCAGGGACTCGTCTG +
Preference number: 4 (lower is better)
Translates to: LGPSAPSDLHSLPVGQDASSGRA*GPGTRL
Trigger: CAGACGAGTCCCTGGGCCCCACGCCCTGCCACTGCT...GGCATCCTGCCCGACAGGTAGCGAATGGAGGTCGCTGGGGGCAGAGGGTCCGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp GTGCATCCGCAGAGCCCACAGGGCTCGGACCCTCTGCCCCCAGCGACCTCCATTGCATGCAGAGCCTCCTaGCAGCCAGGGAGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: VHPQSPQGSDPLPPATSIACRAS*QPGRAA
Trigger: GGCAGCCCTCCCTGGCTGCCAGGAGGCTCTGCATGC...AATGGAGGTCGCTGGGGGCAGAGGGTCCGAGCCCTGTGGGCTCTGCGGATGCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR TCA 90 bp ACAGCCGTGACAGTGTGCCTGCCGGCTGGCGTGCCTTCCTTTCCTGCCCACCAGCTGCCGGCTCCTCGTTaGAGGGGTTCTGGCGCTGGG +
Preference number: 4 (lower is better)
Translates to: TAVTVCLPAGVPSFPAHQLPAPR*RGSGAG
Trigger: CCCAGCGCCAGAACCCCTTCAACGAGGAGCCGGCAG...CTGGTGGGCAGGAAAGGAAGGCACGCCAGCCGGCAGGCACACTGTCACGGCTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR TCA 90 bp CCACCCCCTTTGCTCCTCGGTGCTACAGGCACTGCCGGGTTGAGGGGACAGGCAACACAGGCCCCTCCCTaGCCAGGGACAGCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: PPPLLLGATGTAGLRGQATQAPP*PGTAGP
Trigger: AGGCCCAGCTGTCCCTGGTCAGGGAGGGGCCTGTGT...TGCCTGTCCCCTCAACCCGGCAGTGCCTGTAGCACCGAGGAGCAAAGGGGGTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR TCA 90 bp CTCGGTGCCACTCGGCAGAAATTCTGCAGACTGAGGCGGAGGCCCGGGAGGAGGACACAGGCCCCTCCCTaGCCAGGGACAGCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: LGATRQKFCRLRRRPGRRTQAPP*PGTAGP
Trigger: AGGCCCAGCTGTCCCTGGTCAGGGAGGGGCCTGTGT...CCTCCTCCCGGGCCTCCGCCTCAGTCTGCAGAATTTCTGCCGAGTGGCACCGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR TCA 90 bp CTCGGTGCCACTCGGCAGAAATTCTGCAGACTGAGGCGGAGGCCCGGGAGGAGGCCGAGAGCAGAGGGATaGCGTCGGTGCGGTCCGGGT +
Preference number: 4 (lower is better)
Translates to: LGATRQKFCRLRRRPGRRPRAEG*RRCGPG
Trigger: ACCCGGACCGCACCGACGTCATCCCTCTGCTCTCGG...CCTCCTCCCGGGCCTCCGCCTCAGTCTGCAGAATTTCTGCCGAGTGGCACCGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp CTCGGACCCTCTGCCCCCAGCGACCTCCATTCGCTACCTGTCGGGCAGGATGCCTGCTCTCCGTGGTGCTaGTCGGCCCCTCTCCCTCCT +
Preference number: 4 (lower is better)
Translates to: LGPSAPSDLHSLPVGQDACSPWC*SAPLPP
Trigger: AGGAGGGAGAGGGGCCGAGCAGCACCACGGAGAGCA...GGCATCCTGCCCGACAGGTAGCGAATGGAGGTCGCTGGGGGCAGAGGGTCCGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp ACAGCCGTGACAGTGTGCCTGCCGGCTGGCGTGCCTTCCTTTCCTGCCCACCAGGCTCGGAGCGCTCGCTaGTCTCCGTGGTGCTGCTCG +
Preference number: 4 (lower is better)
Translates to: TAVTVCLPAGVPSFPAHQARSAR*SPWCCS
Trigger: CGAGCAGCACCACGGAGAGCAGCGAGCGCTCCGAGC...CTGGTGGGCAGGAAAGGAAGGCACGCCAGCCGGCAGGCACACTGTCACGGCTGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp ACAGCCGTGACAGTGTGCCTGCCGGCTGGCGTGCCTTCCTTTCCTGCCCACCAGCACACTCGGTGGTTCTaGCGCCCAGGGCAGGGGTGG +
Preference number: 4 (lower is better)
Translates to: TAVTVCLPAGVPSFPAHQHTRWF*RPGQGW
Trigger: CCACCCCTGCCCTGGGCGGCAGAACCACCGAGTGTG...CTGGTGGGCAGGAAAGGAAGGCACGCCAGCCGGCAGGCACACTGTCACGGCTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp GGTGTTCTCGGTGCCACTCGGCAGAAATTCTGCAGACTGAGGCGGAGGCCCGGGACCTGTCGGGCAGGATaGCCAGGGGTGCCGGGCACC +
Preference number: 4 (lower is better)
Translates to: GVLGATRQKFCRLRRRPGTCRAG*PGVPGT
Trigger: GGTGCCCGGCACCCCTGGGCATCCTGCCCGACAGGT...CCCGGGCCTCCGCCTCAGTCTGCAGAATTTCTGCCGAGTGGCACCGAGAACACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp CGGACCCTCTGCCCCCAGCGACCTCCATTCGCTACCTGTCGGGCAGGATGCCCAAGGGCTCGGACCCTCTaGCCCCAGCGACCTCCATTC +
Preference number: 4 (lower is better)
Translates to: RTLCPQRPPFATCRAGCPRARTL*PQRPPF
Trigger: GAATGGAGGTCGCTGGGGGCAGAGGGTCCGAGCCCT...TGGGCATCCTGCCCGACAGGTAGCGAATGGAGGTCGCTGGGGGCAGAGGGTCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp GCCCACAGGGCTCGGACCCTCTGCCCCCAGCGACCTCCATTCGCTACCTGTCGGGCAGGACTGTGGGCATaGAGAGCCTCCTGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: AHRARTLCPQRPPFATCRAGLWA*RASWQP
Trigger: TGGCTGCCAGGAGGCTCTGCATGCCCACAGTCCTGC...CCGACAGGTAGCGAATGGAGGTCGCTGGGGGCAGAGGGTCCGAGCCCTGTGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp GTGCATCCGCAGAGCCCACAGGGCTCGGACCCTCTGCCCCCAGCGACCTCCATTGGGTGGGGCTCCTGGTaGAGGCCTTGCTGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: VHPQSPQGSDPLPPATSIGWGSW*RPCCWS
Trigger: TGACCAGCAGCAAGGCCTCCACCAGGAGCCCCACCC...AATGGAGGTCGCTGGGGGCAGAGGGTCCGAGCCCTGTGGGCTCTGCGGATGCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp CTCGGACCCTCTGCCCCCAGCGACCTCCATTCGCTACCTGTCGGGCAGGATGCCGGGTGGGGCTCCTGGTaGAGGCCTTGCTGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: LGPSAPSDLHSLPVGQDAGWGSW*RPCCWS
Trigger: TGACCAGCAGCAAGGCCTCCACCAGGAGCCCCACCC...GGCATCCTGCCCGACAGGTAGCGAATGGAGGTCGCTGGGGGCAGAGGGTCCGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp CCACCCCCTTTGCTCCTCGGTGCTACAGGCACTGCCGGGTTGAGGGGACAGGCAGGTTCTGGCGCTGGGTaGGGCTCCTGGTGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: PPPLLLGATGTAGLRGQAGSGAG*GSWWRP
Trigger: AGGCCTCCACCAGGAGCCCCACCCAGCGCCAGAACC...TGCCTGTCCCCTCAACCCGGCAGTGCCTGTAGCACCGAGGAGCAAAGGGGGTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp GCCCACAGGGCTCGGACCCTCTGCCCCCAGCGACCTCCATTCGCTACCTGTCGGCCGAAAGGACTGGTCTaGGGGCTCAGCACGGGAGCA +
Preference number: 4 (lower is better)
Translates to: AHRARTLCPQRPPFATCRPKGLV*GLSTGA
Trigger: TGCTCCCGTGCTGAGCCCCCAGACCAGTCCTTTCGG...CCGACAGGTAGCGAATGGAGGTCGCTGGGGGCAGAGGGTCCGAGCCCTGTGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp CAGAGCCCACAGGGCTCGGACCCTCTGCCCCCAGCGACCTCCATTCGCTACCTGCTGGGTCCCAGGCTCTaGCTCAGACACAGGCCCCTC +
Preference number: 4 (lower is better)
Translates to: QSPQGSDPLPPATSIRYLLGPRL*LRHRPL
Trigger: GAGGGGCCTGTGTCTGAGCCAGAGCCTGGGACCCAG...CAGGTAGCGAATGGAGGTCGCTGGGGGCAGAGGGTCCGAGCCCTGTGGGCTCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp CCACCCCCTTTGCTCCTCGGTGCTACAGGCACTGCCGGGTTGAGGGGACAGGCACGTGGGGCCGATCCGTaGTGTTGGCTCTCCGGCAGC +
Preference number: 4 (lower is better)
Translates to: PPPLLLGATGTAGLRGQARGADP*CWLSGS
Trigger: GCTGCCGGAGAGCCAACACCACGGATCGGCCCCACG...TGCCTGTCCCCTCAACCCGGCAGTGCCTGTAGCACCGAGGAGCAAAGGGGGTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp GCCCACAGGGCTCGGACCCTCTGCCCCCAGCGACCTCCATTCGCTACCTGTCGGCTGGGAGCTACGCCCTaGGGGATGACCCCTTTGGAC +
Preference number: 4 (lower is better)
Translates to: AHRARTLCPQRPPFATCRLGATP*GMTPLD
Trigger: GTCCAAAGGGGTCATCCCCCAGGGCGTAGCTCCCAG...CCGACAGGTAGCGAATGGAGGTCGCTGGGGGCAGAGGGTCCGAGCCCTGTGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp CGGACCCTCTGCCCCCAGCGACCTCCATTCGCTACCTGTCGGGCAGGATGCCCAGGCGGGAGGAGCTGCTaGCTGTCCTGGGAGAACTCC +
Preference number: 4 (lower is better)
Translates to: RTLCPQRPPFATCRAGCPGGRSC*LSWENS
Trigger: GGAGTTCTCCCAGGACAGCCAGCAGCTCCTCCCGCC...TGGGCATCCTGCCCGACAGGTAGCGAATGGAGGTCGCTGGGGGCAGAGGGTCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp ACAGCCGTGACAGTGTGCCTGCCGGCTGGCGTGCCTTCCTTTCCTGCCCACCAGGCATGCAGAGCCTCCTaGCAGCCAGGGAGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: TAVTVCLPAGVPSFPAHQACRAS*QPGRAA
Trigger: GGCAGCCCTCCCTGGCTGCCAGGAGGCTCTGCATGC...CTGGTGGGCAGGAAAGGAAGGCACGCCAGCCGGCAGGCACACTGTCACGGCTGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR TCA 90 bp GCCCACAGGGCTCGGACCCTCTGCCCCCAGCGACCTCCATTCGCTACCTGTCGGAGGAAGAGCGTCAGGTaGTCGTGGCTGCAGACCAGG +
Preference number: 4 (lower is better)
Translates to: AHRARTLCPQRPPFATCRRKSVR*SWLQTR
Trigger: CCTGGTCTGCAGCCACGATCACCTGACGCTCTTCCT...CCGACAGGTAGCGAATGGAGGTCGCTGGGGGCAGAGGGTCCGAGCCCTGTGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR TCA 90 bp CTCGGTGCCACTCGGCAGAAATTCTGCAGACTGAGGCGGAGGCCCGGGAGGAGGGAGGGACAGACTGTCTaGGCCGTGGACCGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: LGATRQKFCRLRRRPGRREGQTV*AVDRAG
Trigger: CCCAGCTCGGTCCACGGCTCAGACAGTCTGTCCCTC...CCTCCTCCCGGGCCTCCGCCTCAGTCTGCAGAATTTCTGCCGAGTGGCACCGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR TCA 90 bp CCACCCCCTTTGCTCCTCGGTGCTACAGGCACTGCCGGGTTGAGGGGACAGGCATGGGCCTCCAGCTCCTaGGCCTCCCTCGTGGTATCC +
Preference number: 4 (lower is better)
Translates to: PPPLLLGATGTAGLRGQAWASSS*ASLVVS
Trigger: GGATACCACGAGGGAGGCTCAGGAGCTGGAGGCCCA...TGCCTGTCCCCTCAACCCGGCAGTGCCTGTAGCACCGAGGAGCAAAGGGGGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR TCA 90 bp TTAAGCCACACTCGGTGGTTCTGCCGCCCAGGGCAGGGGTGGACTGTAGGCTCCGCCGGTCGGAGAGAATaGCCTGGAAGGCGTGGGGCC +
Preference number: 4 (lower is better)
Translates to: LSHTRWFCRPGQGWTVGSAGRRE*PGRRGA
Trigger: GGCCCCACGCCTTCCAGGTCATTCTCTCCGACCGGC...GGAGCCTACAGTCCACCCCTGCCCTGGGCGGCAGAACCACCGAGTGTGGCTTAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR TCA 90 bp AACAGCCGTGACAGTGTGCCTGCCGGCTGGCGTGCCTTCCTTTCCTGCCCACCAGCCGGTCGGAGAGAATaGCCTGGAAGGCGTGGGGCC +
Preference number: 4 (lower is better)
Translates to: NSRDSVPAGWRAFLSCPPAGRRE*PGRRGA
Trigger: GGCCCCACGCCTTCCAGGTCATTCTCTCCGACCGGC...TGGTGGGCAGGAAAGGAAGGCACGCCAGCCGGCAGGCACACTGTCACGGCTGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR TCA 90 bp AACAGCCGTGACAGTGTGCCTGCCGGCTGGCGTGCCTTCCTTTCCTGCCCACCACGGTGGAGACGGCGCTaGTGTCGCCCAGCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: NSRDSVPAGWRAFLSCPPRWRRR*CRPAWL
Trigger: CAGCCAAGCTGGGCGACATCAGCGCCGTCTCCACCG...TGGTGGGCAGGAAAGGAAGGCACGCCAGCCGGCAGGCACACTGTCACGGCTGTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR TCA 90 bp GTGCATCCGCAGAGCCCACAGGGCTCGGACCCTCTGCCCCCAGCGACCTCCATTGCCAGGCGCTGTGGATaGGGCTCAAGGCATCCTCGA +
Preference number: 4 (lower is better)
Translates to: VHPQSPQGSDPLPPATSIARRCG*GSRHPR
Trigger: TCGAGGATGCCTTGAGCCTCATCCACAGCGCCTGGC...AATGGAGGTCGCTGGGGGCAGAGGGTCCGAGCCCTGTGGGCTCTGCGGATGCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR TCA 90 bp TTAAGCCACACTCGGTGGTTCTGCCGCCCAGGGCAGGGGTGGACTGTAGGCTCCGGGGTGCCGGGCACCTaGTCTGGATCCCTGGAGTGG +
Preference number: 4 (lower is better)
Translates to: LSHTRWFCRPGQGWTVGSGVPGT*SGSLEW
Trigger: CCACTCCAGGGATCCAGATCAGGTGCCCGGCACCCC...GGAGCCTACAGTCCACCCCTGCCCTGGGCGGCAGAACCACCGAGTGTGGCTTAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp GCCCACAGGGCTCGGACCCTCTGCCCCCAGCGACCTCCATTCGCTACCTGTCGGAGGTTGGTGGCCACGTaGTGCAGCACCTCGATCTGC +
Preference number: 4 (lower is better)
Translates to: AHRARTLCPQRPPFATCRRLVAT*CSTSIC
Trigger: GCAGATCGAGGTGCTGCAGCACGTGGCCACCAACCT...CCGACAGGTAGCGAATGGAGGTCGCTGGGGGCAGAGGGTCCGAGCCCTGTGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp GCCCACAGGGCTCGGACCCTCTGCCCCCAGCGACCTCCATTCGCTACCTGTCGGGGAGGACACAGTCTCTaGCGGCTCCTCGTTGAAGGG +
Preference number: 4 (lower is better)
Translates to: AHRARTLCPQRPPFATCRGGHSL*RLLVEG
Trigger: CCCTTCAACGAGGAGCCGGCAGAGACTGTGTCCTCC...CCGACAGGTAGCGAATGGAGGTCGCTGGGGGCAGAGGGTCCGAGCCCTGTGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp AACAGCCGTGACAGTGTGCCTGCCGGCTGGCGTGCCTTCCTTTCCTGCCCACCACGGTTGGCCAAGCCCTaGAGGGTCATGGTGGCCGCC +
Preference number: 4 (lower is better)
Translates to: NSRDSVPAGWRAFLSCPPRLAKP*RVMVAA
Trigger: GGCGGCCACCATGACCCTGCAGGGCTTGGCCAACCG...TGGTGGGCAGGAAAGGAAGGCACGCCAGCCGGCAGGCACACTGTCACGGCTGTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp GGTGTTCTCGGTGCCACTCGGCAGAAATTCTGCAGACTGAGGCGGAGGCCCGGGCGGTTGGCCAAGCCCTaGAGGGTCATGGTGGCCGCC +
Preference number: 4 (lower is better)
Translates to: GVLGATRQKFCRLRRRPGRLAKP*RVMVAA
Trigger: GGCGGCCACCATGACCCTGCAGGGCTTGGCCAACCG...CCCGGGCCTCCGCCTCAGTCTGCAGAATTTCTGCCGAGTGGCACCGAGAACACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp CGGACCCTCTGCCCCCAGCGACCTCCATTCGCTACCTGTCGGGCAGGATGCCCAACAGCAGCTGCAGGTTaGCCTCCATGTGCCCGGTGC +
Preference number: 4 (lower is better)
Translates to: RTLCPQRPPFATCRAGCPTAAAG*PPCARC
Trigger: GCACCGGGCACATGGAGGGCAACCTGCAGCTGCTGT...TGGGCATCCTGCCCGACAGGTAGCGAATGGAGGTCGCTGGGGGCAGAGGGTCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp CGGACCCTCTGCCCCCAGCGACCTCCATTCGCTACCTGTCGGGCAGGATGCCCAAGACGCAGTACTCCTTaGCCGGCTCGGTGGAGACGG +
Preference number: 4 (lower is better)
Translates to: RTLCPQRPPFATCRAGCPRRSTP*PARWRR
Trigger: CCGTCTCCACCGAGCCGGGCAAGGAGTACTGCGTCT...TGGGCATCCTGCCCGACAGGTAGCGAATGGAGGTCGCTGGGGGCAGAGGGTCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp GTGCATCCGCAGAGCCCACAGGGCTCGGACCCTCTGCCCCCAGCGACCTCCATTAGACTGTCGCTCCGCTaGCAGGCGCTGTGGATGAGG +
Preference number: 4 (lower is better)
Translates to: VHPQSPQGSDPLPPATSIRLSLR*QALWMR
Trigger: CCTCATCCACAGCGCCTGGCAGCGGAGCGACAGTCT...AATGGAGGTCGCTGGGGGCAGAGGGTCCGAGCCCTGTGGGCTCTGCGGATGCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp CTCGGACCCTCTGCCCCCAGCGACCTCCATTCGCTACCTGTCGGGCAGGATGCCCGTGCCTTCCTTTCCTaGCCACCAGGGACGCCAACC +
Preference number: 4 (lower is better)
Translates to: LGPSAPSDLHSLPVGQDARAFLS*PPGTPT
Trigger: GGTTGGCGTCCCTGGTGGGCAGGAAAGGAAGGCACG...GGCATCCTGCCCGACAGGTAGCGAATGGAGGTCGCTGGGGGCAGAGGGTCCGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp CGGACCCTCTGCCCCCAGCGACCTCCATTCGCTACCTGTCGGGCAGGATGCCCACAGGATGCCCAGGGGTaGCGGGCACCTGATCTGGAT +
Preference number: 4 (lower is better)
Translates to: RTLCPQRPPFATCRAGCPQDAQG*RAPDLD
Trigger: ATCCAGATCAGGTGCCCGGCACCCCTGGGCATCCTG...TGGGCATCCTGCCCGACAGGTAGCGAATGGAGGTCGCTGGGGGCAGAGGGTCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp GCCCACAGGGCTCGGACCCTCTGCCCCCAGCGACCTCCATTCGCTACCTGTCGGCCCTTTGCTCCTCGGTaGTACAGGCACTGCCGGGTT +
Preference number: 4 (lower is better)
Translates to: AHRARTLCPQRPPFATCRPFAPR*YRHCRV
Trigger: AACCCGGCAGTGCCTGTAGCACCGAGGAGCAAAGGG...CCGACAGGTAGCGAATGGAGGTCGCTGGGGGCAGAGGGTCCGAGCCCTGTGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp GCCCACAGGGCTCGGACCCTCTGCCCCCAGCGACCTCCATTCGCTACCTGTCGGCCCATCCACCCCCTTTaGTCCTCGGTGCTACAGGCA +
Preference number: 4 (lower is better)
Translates to: AHRARTLCPQRPPFATCRPIHPL*SSVLQA
Trigger: TGCCTGTAGCACCGAGGAGCAAAGGGGGTGGATGGG...CCGACAGGTAGCGAATGGAGGTCGCTGGGGGCAGAGGGTCCGAGCCCTGTGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp CTCGGACCCTCTGCCCCCAGCGACCTCCATTCGCTACCTGTCGGGCAGGATGCCTGGAGGCCTTGCTGCTaGTCAGGTCGGAGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: LGPSAPSDLHSLPVGQDAWRPCC*SGRRLW
Trigger: CCACAGCCTCCGACCTGACCAGCAGCAAGGCCTCCA...GGCATCCTGCCCGACAGGTAGCGAATGGAGGTCGCTGGGGGCAGAGGGTCCGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp GTTCTCGGTGCCACTCGGCAGAAATTCTGCAGACTGAGGCGGAGGCCCGGGAGGGCTGGGTGGGGCTCCTaGTGGAGGCCTTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: VLGATRQKFCRLRRRPGRAGWGS*WRPCCW
Trigger: CCAGCAGCAAGGCCTCCACCAGGAGCCCCACCCAGC...CCTCCCGGGCCTCCGCCTCAGTCTGCAGAATTTCTGCCGAGTGGCACCGAGAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp AACAGCCGTGACAGTGTGCCTGCCGGCTGGCGTGCCTTCCTTTCCTGCCCACCAGGTTCTGGCGCTGGGTaGGGCTCCTGGTGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: NSRDSVPAGWRAFLSCPPGSGAG*GSWWRP
Trigger: AGGCCTCCACCAGGAGCCCCACCCAGCGCCAGAACC...TGGTGGGCAGGAAAGGAAGGCACGCCAGCCGGCAGGCACACTGTCACGGCTGTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp CCACCCCCTTTGCTCCTCGGTGCTACAGGCACTGCCGGGTTGAGGGGACAGGCAAAGGGGTTCTGGCGCTaGGTGGGGCTCCTGGTGGAG +
Preference number: 4 (lower is better)
Translates to: PPPLLLGATGTAGLRGQAKGFWR*VGLLVE
Trigger: CTCCACCAGGAGCCCCACCCAGCGCCAGAACCCCTT...TGCCTGTCCCCTCAACCCGGCAGTGCCTGTAGCACCGAGGAGCAAAGGGGGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp GTTCTCGGTGCCACTCGGCAGAAATTCTGCAGACTGAGGCGGAGGCCCGGGAGGGTCCCGCCCAAGGCTTaGGCTGCCGTTGCGGCTGTC +
Preference number: 4 (lower is better)
Translates to: VLGATRQKFCRLRRRPGRVPPKA*AAVAAV
Trigger: GACAGCCGCAACGGCAGCCCAAGCCTTGGGCGGGAC...CCTCCCGGGCCTCCGCCTCAGTCTGCAGAATTTCTGCCGAGTGGCACCGAGAAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375793.2
ENST00000375799.8
CDS-3UTR CCA 90 bp GTTCTCGGTGCCACTCGGCAGAAATTCTGCAGACTGAGGCGGAGGCCCGGGAGGGCTCGCTGCTCTCCGTaGTGCTGCTCGGCCCCTCTC +
Preference number: 4 (lower is better)
Translates to: VLGATRQKFCRLRRRPGRARCSP*CCSAPL
Trigger: GAGAGGGGCCGAGCAGCACCACGGAGAGCAGCGAGC...CCTCCCGGGCCTCCGCCTCAGTCTGCAGAATTTCTGCCGAGTGGCACCGAGAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp GCCCACAGGGCTCGGACCCTCTGCCCCCAGCGACCTCCATTCGCTACCTGTCGGCCAGGGACTCGTCTGTaGGGTCCTCCCAGTGCACAA +
Preference number: 4 (lower is better)
Translates to: AHRARTLCPQRPPFATCRPGTRL*GPPSAQ
Trigger: TTGTGCACTGGGAGGACCCCACAGACGAGTCCCTGG...CCGACAGGTAGCGAATGGAGGTCGCTGGGGGCAGAGGGTCCGAGCCCTGTGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp GTTCTCGGTGCCACTCGGCAGAAATTCTGCAGACTGAGGCGGAGGCCCGGGAGGAGCAGTGGCAGGGCGTaGGGCCCAGGGACTCGTCTG +
Preference number: 4 (lower is better)
Translates to: VLGATRQKFCRLRRRPGRSSGRA*GPGTRL
Trigger: CAGACGAGTCCCTGGGCCCCACGCCCTGCCACTGCT...CCTCCCGGGCCTCCGCCTCAGTCTGCAGAATTTCTGCCGAGTGGCACCGAGAAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp GGTGTTCTCGGTGCCACTCGGCAGAAATTCTGCAGACTGAGGCGGAGGCCCGGGAGCAGTGGCAGGGCGTaGGGCCCAGGGACTCGTCTG +
Preference number: 4 (lower is better)
Translates to: GVLGATRQKFCRLRRRPGSSGRA*GPGTRL
Trigger: CAGACGAGTCCCTGGGCCCCACGCCCTGCCACTGCT...CCCGGGCCTCCGCCTCAGTCTGCAGAATTTCTGCCGAGTGGCACCGAGAACACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp CAGAGCCCACAGGGCTCGGACCCTCTGCCCCCAGCGACCTCCATTCGCTACCTGACGAACAAGGATGGCTaGGCACTCAGGGCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: QSPQGSDPLPPATSIRYLTNKDG*ALRAPA
Trigger: GGCTGGGGCCCTGAGTGCCCAGCCATCCTTGTTCGT...CAGGTAGCGAATGGAGGTCGCTGGGGGCAGAGGGTCCGAGCCCTGTGGGCTCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp CTCGGACCCTCTGCCCCCAGCGACCTCCATTCGCTACCTGTCGGGCAGGATGCCACATGGATGCCAGGCTaGTGGGCTCCGCCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: LGPSAPSDLHSLPVGQDATWMPG*WAPPFS
Trigger: GGAGAAGGGCGGAGCCCACCAGCCTGGCATCCATGT...GGCATCCTGCCCGACAGGTAGCGAATGGAGGTCGCTGGGGGCAGAGGGTCCGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR TCA 90 bp GGTGTTCTCGGTGCCACTCGGCAGAAATTCTGCAGACTGAGGCGGAGGCCCGGGGAGGGACAGACTGTCTaGGCCGTGGACCGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: GVLGATRQKFCRLRRRPGEGQTV*AVDRAG
Trigger: CCCAGCTCGGTCCACGGCTCAGACAGTCTGTCCCTC...CCCGGGCCTCCGCCTCAGTCTGCAGAATTTCTGCCGAGTGGCACCGAGAACACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR TCA 90 bp AACAGCCGTGACAGTGTGCCTGCCGGCTGGCGTGCCTTCCTTTCCTGCCCACCAGCCTCCTCCTTCTCCTaGGAGGTGGTGTGCACGGGG +
Preference number: 4 (lower is better)
Translates to: NSRDSVPAGWRAFLSCPPASSFS*EVVCTG
Trigger: CCCCGTGCACACCACCTCTCAGGAGAAGGAGGAGGC...TGGTGGGCAGGAAAGGAAGGCACGCCAGCCGGCAGGCACACTGTCACGGCTGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR TCA 90 bp TTAAGCCACACTCGGTGGTTCTGCCGCCCAGGGCAGGGGTGGACTGTAGGCTCCTGGGCCTCCAGCTCCTaGGCCTCCCTCGTGGTATCC +
Preference number: 4 (lower is better)
Translates to: LSHTRWFCRPGQGWTVGSWASSS*ASLVVS
Trigger: GGATACCACGAGGGAGGCTCAGGAGCTGGAGGCCCA...GGAGCCTACAGTCCACCCCTGCCCTGGGCGGCAGAACCACCGAGTGTGGCTTAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR TCA 90 bp CTCGGACCCTCTGCCCCCAGCGACCTCCATTCGCTACCTGTCGGGCAGGATGCCTGGGCTGGTCTCGCTTaGGCTGGCAGAGAACCTCCT +
Preference number: 4 (lower is better)
Translates to: LGPSAPSDLHSLPVGQDAWAGLA*AGREPP
Trigger: AGGAGGTTCTCTGCCAGCTCAAGCGAGACCAGCCCA...GGCATCCTGCCCGACAGGTAGCGAATGGAGGTCGCTGGGGGCAGAGGGTCCGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR TCA 90 bp CTCGGTGCCACTCGGCAGAAATTCTGCAGACTGAGGCGGAGGCCCGGGAGGAGGGCCAGGCGCTGTGGATaGGGCTCAAGGCATCCTCGA +
Preference number: 4 (lower is better)
Translates to: LGATRQKFCRLRRRPGRRARRCG*GSRHPR
Trigger: TCGAGGATGCCTTGAGCCTCATCCACAGCGCCTGGC...CCTCCTCCCGGGCCTCCGCCTCAGTCTGCAGAATTTCTGCCGAGTGGCACCGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR TCA 90 bp CCACCCCCTTTGCTCCTCGGTGCTACAGGCACTGCCGGGTTGAGGGGACAGGCAGCCAGGCGCTGTGGATaGGGCTCAAGGCATCCTCGA +
Preference number: 4 (lower is better)
Translates to: PPPLLLGATGTAGLRGQAARRCG*GSRHPR
Trigger: TCGAGGATGCCTTGAGCCTCATCCACAGCGCCTGGC...TGCCTGTCCCCTCAACCCGGCAGTGCCTGTAGCACCGAGGAGCAAAGGGGGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp CTCGGACCCTCTGCCCCCAGCGACCTCCATTCGCTACCTGTCGGGCAGGATGCCAGGTTGGTGGCCACGTaGTGCAGCACCTCGATCTGC +
Preference number: 4 (lower is better)
Translates to: LGPSAPSDLHSLPVGQDARLVAT*CSTSIC
Trigger: GCAGATCGAGGTGCTGCAGCACGTGGCCACCAACCT...GGCATCCTGCCCGACAGGTAGCGAATGGAGGTCGCTGGGGGCAGAGGGTCCGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp CTCGGTGCCACTCGGCAGAAATTCTGCAGACTGAGGCGGAGGCCCGGGAGGAGGTGGTGGAGGCCTTGCTaGTGGTCAGGTCGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: LGATRQKFCRLRRRPGRRWWRPC*WSGRRL
Trigger: CAGCCTCCGACCTGACCAGCAGCAAGGCCTCCACCA...CCTCCTCCCGGGCCTCCGCCTCAGTCTGCAGAATTTCTGCCGAGTGGCACCGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp GCCGGGCACCTGATCTGGATCCCTGGAGTGGAGGGACCCTGTCTTAAGCCACACGCTCGGAGCGCTCGCTaGTCTCCGTGGTGCTGCTCG +
Preference number: 4 (lower is better)
Translates to: AGHLIWIPGVEGPCLKPHARSAR*SPWCCS
Trigger: CGAGCAGCACCACGGAGAGCAGCGAGCGCTCCGAGC...GTGTGGCTTAAGACAGGGTCCCTCCACTCCAGGGATCCAGATCAGGTGCCCGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp CGGACCCTCTGCCCCCAGCGACCTCCATTCGCTACCTGTCGGGCAGGATGCCCAGTGCTGGGGTCCAGCTaGCCGTTGAGCTGGTCGATA +
Preference number: 4 (lower is better)
Translates to: RTLCPQRPPFATCRAGCPVLGSS*PLSWSI
Trigger: TATCGACCAGCTCAACGGGCAGCTGGACCCCAGCAC...TGGGCATCCTGCCCGACAGGTAGCGAATGGAGGTCGCTGGGGGCAGAGGGTCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp CGGACCCTCTGCCCCCAGCGACCTCCATTCGCTACCTGTCGGGCAGGATGCCCAAGGTTGCCCTCCATGTaGCCGGTGCTCATCCGGATC +
Preference number: 4 (lower is better)
Translates to: RTLCPQRPPFATCRAGCPRLPSM*PVLIRI
Trigger: GATCCGGATGAGCACCGGGCACATGGAGGGCAACCT...TGGGCATCCTGCCCGACAGGTAGCGAATGGAGGTCGCTGGGGGCAGAGGGTCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp CAGAGCCCACAGGGCTCGGACCCTCTGCCCCCAGCGACCTCCATTCGCTACCTGAGGTTGCCCTCCATGTaGCCGGTGCTCATCCGGATC +
Preference number: 4 (lower is better)
Translates to: QSPQGSDPLPPATSIRYLRLPSM*PVLIRI
Trigger: GATCCGGATGAGCACCGGGCACATGGAGGGCAACCT...CAGGTAGCGAATGGAGGTCGCTGGGGGCAGAGGGTCCGAGCCCTGTGGGCTCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp ACAGCCGTGACAGTGTGCCTGCCGGCTGGCGTGCCTTCCTTTCCTGCCCACCAGACAGCAGCTGCAGGTTaGCCTCCATGTGCCCGGTGC +
Preference number: 4 (lower is better)
Translates to: TAVTVCLPAGVPSFPAHQTAAAG*PPCARC
Trigger: GCACCGGGCACATGGAGGGCAACCTGCAGCTGCTGT...CTGGTGGGCAGGAAAGGAAGGCACGCCAGCCGGCAGGCACACTGTCACGGCTGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp GCCCACAGGGCTCGGACCCTCTGCCCCCAGCGACCTCCATTCGCTACCTGTCGGAGCACGTACAGCAGCTaGAGGTTGCCCTCCATGTGC +
Preference number: 4 (lower is better)
Translates to: AHRARTLCPQRPPFATCRSTYSS*RLPSMC
Trigger: GCACATGGAGGGCAACCTGCAGCTGCTGTACGTGCT...CCGACAGGTAGCGAATGGAGGTCGCTGGGGGCAGAGGGTCCGAGCCCTGTGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp GCCCACAGGGCTCGGACCCTCTGCCCCCAGCGACCTCCATTCGCTACCTGTCGGACAGCCTGGCAGAGATaGTGCATCCACTCGGCCATC +
Preference number: 4 (lower is better)
Translates to: AHRARTLCPQRPPFATCRTAWQR*CIHSAI
Trigger: GATGGCCGAGTGGATGCAGCATCTCTGCCAGGCTGT...CCGACAGGTAGCGAATGGAGGTCGCTGGGGGCAGAGGGTCCGAGCCCTGTGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp AACAGCCGTGACAGTGTGCCTGCCGGCTGGCGTGCCTTCCTTTCCTGCCCACCAACAGCCGTGACAGTGTaGCTGCCGGCTGGCGTGCCT +
Preference number: 4 (lower is better)
Translates to: NSRDSVPAGWRAFLSCPPTAVTV*LPAGVP
Trigger: AGGCACGCCAGCCGGCAGGCACACTGTCACGGCTGT...TGGTGGGCAGGAAAGGAAGGCACGCCAGCCGGCAGGCACACTGTCACGGCTGTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp AACAGCCGTGACAGTGTGCCTGCCGGCTGGCGTGCCTTCCTTTCCTGCCCACCAAGGGCTCGGACCCTCTaGCCCCAGCGACCTCCATTC +
Preference number: 4 (lower is better)
Translates to: NSRDSVPAGWRAFLSCPPRARTL*PQRPPF
Trigger: GAATGGAGGTCGCTGGGGGCAGAGGGTCCGAGCCCT...TGGTGGGCAGGAAAGGAAGGCACGCCAGCCGGCAGGCACACTGTCACGGCTGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp CTCGGTGCCACTCGGCAGAAATTCTGCAGACTGAGGCGGAGGCCCGGGAGGAGGGCAGGACTGTGGGCATaGAGAGCCTCCTGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: LGATRQKFCRLRRRPGRRAGLWA*RASWQP
Trigger: TGGCTGCCAGGAGGCTCTGCATGCCCACAGTCCTGC...CCTCCTCCCGGGCCTCCGCCTCAGTCTGCAGAATTTCTGCCGAGTGGCACCGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp CAGAGCCCACAGGGCTCGGACCCTCTGCCCCCAGCGACCTCCATTCGCTACCTGCCCTTTGCTCCTCGGTaGTACAGGCACTGCCGGGTT +
Preference number: 4 (lower is better)
Translates to: QSPQGSDPLPPATSIRYLPFAPR*YRHCRV
Trigger: AACCCGGCAGTGCCTGTAGCACCGAGGAGCAAAGGG...CAGGTAGCGAATGGAGGTCGCTGGGGGCAGAGGGTCCGAGCCCTGTGGGCTCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp GGTGTTCTCGGTGCCACTCGGCAGAAATTCTGCAGACTGAGGCGGAGGCCCGGGTGCGCCCCAGGTTGGTaGCCACGTGCTGCAGCACCT +
Preference number: 4 (lower is better)
Translates to: GVLGATRQKFCRLRRRPGCAPGW*PRAAAP
Trigger: AGGTGCTGCAGCACGTGGCCACCAACCTGGGGCGCA...CCCGGGCCTCCGCCTCAGTCTGCAGAATTTCTGCCGAGTGGCACCGAGAACACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp ACAGCCGTGACAGTGTGCCTGCCGGCTGGCGTGCCTTCCTTTCCTGCCCACCAGCCGAAAGGACTGGTCTaGGGGCTCAGCACGGGAGCA +
Preference number: 4 (lower is better)
Translates to: TAVTVCLPAGVPSFPAHQPKGLV*GLSTGA
Trigger: TGCTCCCGTGCTGAGCCCCCAGACCAGTCCTTTCGG...CTGGTGGGCAGGAAAGGAAGGCACGCCAGCCGGCAGGCACACTGTCACGGCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp TTAAGCCACACTCGGTGGTTCTGCCGCCCAGGGCAGGGGTGGACTGTAGGCTCCCCGGTCCGAAAGGACTaGTCTGGGGGCTCAGCACGG +
Preference number: 4 (lower is better)
Translates to: LSHTRWFCRPGQGWTVGSPVRKD*SGGSAR
Trigger: CCGTGCTGAGCCCCCAGACCAGTCCTTTCGGACCGG...GGAGCCTACAGTCCACCCCTGCCCTGGGCGGCAGAACCACCGAGTGTGGCTTAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp CGGACCCTCTGCCCCCAGCGACCTCCATTCGCTACCTGTCGGGCAGGATGCCCAAGCCCTGCAGGGTCATaGTGGCCGCCACCTGATGTA +
Preference number: 4 (lower is better)
Translates to: RTLCPQRPPFATCRAGCPSPAGS*WPPPDV
Trigger: TACATCAGGTGGCGGCCACCATGACCCTGCAGGGCT...TGGGCATCCTGCCCGACAGGTAGCGAATGGAGGTCGCTGGGGGCAGAGGGTCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp GGTGTTCTCGGTGCCACTCGGCAGAAATTCTGCAGACTGAGGCGGAGGCCCGGGCTGGGTCCCAGGCTCTaGCTCAGACACAGGCCCCTC +
Preference number: 4 (lower is better)
Translates to: GVLGATRQKFCRLRRRPGLGPRL*LRHRPL
Trigger: GAGGGGCCTGTGTCTGAGCCAGAGCCTGGGACCCAG...CCCGGGCCTCCGCCTCAGTCTGCAGAATTTCTGCCGAGTGGCACCGAGAACACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp AACAGCCGTGACAGTGTGCCTGCCGGCTGGCGTGCCTTCCTTTCCTGCCCACCACTGGGTCCCAGGCTCTaGCTCAGACACAGGCCCCTC +
Preference number: 4 (lower is better)
Translates to: NSRDSVPAGWRAFLSCPPLGPRL*LRHRPL
Trigger: GAGGGGCCTGTGTCTGAGCCAGAGCCTGGGACCCAG...TGGTGGGCAGGAAAGGAAGGCACGCCAGCCGGCAGGCACACTGTCACGGCTGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp GGTGTTCTCGGTGCCACTCGGCAGAAATTCTGCAGACTGAGGCGGAGGCCCGGGGGCGGGAGGAGCTGCTaGCTGTCCTGGGAGAACTCC +
Preference number: 4 (lower is better)
Translates to: GVLGATRQKFCRLRRRPGGGRSC*LSWENS
Trigger: GGAGTTCTCCCAGGACAGCCAGCAGCTCCTCCCGCC...CCCGGGCCTCCGCCTCAGTCTGCAGAATTTCTGCCGAGTGGCACCGAGAACACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp AACAGCCGTGACAGTGTGCCTGCCGGCTGGCGTGCCTTCCTTTCCTGCCCACCAGGCGGGAGGAGCTGCTaGCTGTCCTGGGAGAACTCC +
Preference number: 4 (lower is better)
Translates to: NSRDSVPAGWRAFLSCPPGGRSC*LSWENS
Trigger: GGAGTTCTCCCAGGACAGCCAGCAGCTCCTCCCGCC...TGGTGGGCAGGAAAGGAAGGCACGCCAGCCGGCAGGCACACTGTCACGGCTGTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp CCACCCCCTTTGCTCCTCGGTGCTACAGGCACTGCCGGGTTGAGGGGACAGGCACGCTGCCAGGCGCTGTaGATGAGGCTCAAGGCATCC +
Preference number: 4 (lower is better)
Translates to: PPPLLLGATGTAGLRGQARCQAL*MRLKAS
Trigger: GGATGCCTTGAGCCTCATCCACAGCGCCTGGCAGCG...TGCCTGTCCCCTCAACCCGGCAGTGCCTGTAGCACCGAGGAGCAAAGGGGGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp CAGAGCCCACAGGGCTCGGACCCTCTGCCCCCAGCGACCTCCATTCGCTACCTGTTAAGCCACACTCGGTaGTTCTGCCGCCCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: QSPQGSDPLPPATSIRYLLSHTR*FCRPGQ
Trigger: CTGCCCTGGGCGGCAGAACCACCGAGTGTGGCTTAA...CAGGTAGCGAATGGAGGTCGCTGGGGGCAGAGGGTCCGAGCCCTGTGGGCTCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR TCA 90 bp GCCGGGCACCTGATCTGGATCCCTGGAGTGGAGGGACCCTGTCTTAAGCCACACGCCTCCTCCTTCTCCTaGGAGGTGGTGTGCACGGGG +
Preference number: 4 (lower is better)
Translates to: AGHLIWIPGVEGPCLKPHASSFS*EVVCTG
Trigger: CCCCGTGCACACCACCTCTCAGGAGAAGGAGGAGGC...GTGTGGCTTAAGACAGGGTCCCTCCACTCCAGGGATCCAGATCAGGTGCCCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR TCA 90 bp GCCGGGCACCTGATCTGGATCCCTGGAGTGGAGGGACCCTGTCTTAAGCCACACTGGGCCTCCAGCTCCTaGGCCTCCCTCGTGGTATCC +
Preference number: 4 (lower is better)
Translates to: AGHLIWIPGVEGPCLKPHWASSS*ASLVVS
Trigger: GGATACCACGAGGGAGGCTCAGGAGCTGGAGGCCCA...GTGTGGCTTAAGACAGGGTCCCTCCACTCCAGGGATCCAGATCAGGTGCCCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR TCA 90 bp CGGACCCTCTGCCCCCAGCGACCTCCATTCGCTACCTGTCGGGCAGGATGCCCACGTAGAAGCGCACGGTaGCAGCAGATGCCTCACACT +
Preference number: 4 (lower is better)
Translates to: RTLCPQRPPFATCRAGCPRRSAR*QQMPHT
Trigger: AGTGTGAGGCATCTGCTGTCACCGTGCGCTTCTACG...TGGGCATCCTGCCCGACAGGTAGCGAATGGAGGTCGCTGGGGGCAGAGGGTCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR TCA 90 bp GGTGTTCTCGGTGCCACTCGGCAGAAATTCTGCAGACTGAGGCGGAGGCCCGGGAGAGGCGGTCATCCGTaGGGACCAGGCAGCAGGGTA +
Preference number: 4 (lower is better)
Translates to: GVLGATRQKFCRLRRRPGRGGHP*GPGSRV
Trigger: TACCCTGCTGCCTGGTCCTCACGGATGACCGCCTCT...CCCGGGCCTCCGCCTCAGTCTGCAGAATTTCTGCCGAGTGGCACCGAGAACACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR TCA 90 bp CTCGGACCCTCTGCCCCCAGCGACCTCCATTCGCTACCTGTCGGGCAGGATGCCTCCCCAGGAGGCTCTTaGCGAAACTCTAGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: LGPSAPSDLHSLPVGQDASPGGS*RNSREG
Trigger: CCCTTCCCTAGAGTTTCGTCAAGAGCCTCCTGGGGA...GGCATCCTGCCCGACAGGTAGCGAATGGAGGTCGCTGGGGGCAGAGGGTCCGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp CGGACCCTCTGCCCCCAGCGACCTCCATTCGCTACCTGTCGGGCAGGATGCCCATTGGTGGCCACGTGCTaGAGCACCTCGATCTGCTTG +
Preference number: 4 (lower is better)
Translates to: RTLCPQRPPFATCRAGCPLVATC*STSICL
Trigger: CAAGCAGATCGAGGTGCTGCAGCACGTGGCCACCAA...TGGGCATCCTGCCCGACAGGTAGCGAATGGAGGTCGCTGGGGGCAGAGGGTCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp GTTCTCGGTGCCACTCGGCAGAAATTCTGCAGACTGAGGCGGAGGCCCGGGAGGTGGTGGAGGCCTTGCTaGTGGTCAGGTCGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: VLGATRQKFCRLRRRPGRWWRPC*WSGRRL
Trigger: CAGCCTCCGACCTGACCAGCAGCAAGGCCTCCACCA...CCTCCCGGGCCTCCGCCTCAGTCTGCAGAATTTCTGCCGAGTGGCACCGAGAAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp TTAAGCCACACTCGGTGGTTCTGCCGCCCAGGGCAGGGGTGGACTGTAGGCTCCTGGTGGAGGCCTTGCTaGTGGTCAGGTCGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: LSHTRWFCRPGQGWTVGSWWRPC*WSGRRL
Trigger: CAGCCTCCGACCTGACCAGCAGCAAGGCCTCCACCA...GGAGCCTACAGTCCACCCCTGCCCTGGGCGGCAGAACCACCGAGTGTGGCTTAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp GATGGAGCTAGGAGGAGGAAACATGCGCAGACACCCCGTGTTCCCGCTTCCCCAGGCTTGGGCTGCCGTTaGGGCTGTCACCGTCCCCCT +
Preference number: 4 (lower is better)
Translates to: DGARRRKHAQTPRVPASPGLGCR*GCHRPP
Trigger: AGGGGGACGGTGACAGCCGCAACGGCAGCCCAAGCC...TGGGGAAGCGGGAACACGGGGTGTCTGCGCATGTTTCCTCCTCCTAGCTCCATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375793.2
ENST00000375799.8
CDS-3UTR GCA 90 bp GTTCTCGGTGCCACTCGGCAGAAATTCTGCAGACTGAGGCGGAGGCCCGGGAGGACCTTGCTCAGGGGCTaGCCCAAGCGCTCCATGGAG +
Preference number: 4 (lower is better)
Translates to: VLGATRQKFCRLRRRPGRTLLRG*PKRSME
Trigger: CTCCATGGAGCGCTTGGGGCAGCCCCTGAGCAAGGT...CCTCCCGGGCCTCCGCCTCAGTCTGCAGAATTTCTGCCGAGTGGCACCGAGAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp GATGGAGCTAGGAGGAGGAAACATGCGCAGACACCCCGTGTTCCCGCTTCCCCACACGGGAGCACCAGGTaGTGGGGTCCAGCTGCCCGT +
Preference number: 4 (lower is better)
Translates to: DGARRRKHAQTPRVPASPHGSTR*WGPAAR
Trigger: ACGGGCAGCTGGACCCCAGCACCTGGTGCTCCCGTG...TGGGGAAGCGGGAACACGGGGTGTCTGCGCATGTTTCCTCCTCCTAGCTCCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp CAGAGCCCACAGGGCTCGGACCCTCTGCCCCCAGCGACCTCCATTCGCTACCTGGGGCTACTAGGAACATaGAGCGGTTGGCCAAGCCCT +
Preference number: 4 (lower is better)
Translates to: QSPQGSDPLPPATSIRYLGLLGT*SGWPSP
Trigger: AGGGCTTGGCCAACCGCTGCATGTTCCTAGTAGCCC...CAGGTAGCGAATGGAGGTCGCTGGGGGCAGAGGGTCCGAGCCCTGTGGGCTCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp CGGACCCTCTGCCCCCAGCGACCTCCATTCGCTACCTGTCGGGCAGGATGCCCAACCAGCTTCACCGTCTaGTGGTCAAGGCCAACCGAC +
Preference number: 4 (lower is better)
Translates to: RTLCPQRPPFATCRAGCPTSFTV*WSRPTD
Trigger: GTCGGTTGGCCTTGACCAGCAGACGGTGAAGCTGGT...TGGGCATCCTGCCCGACAGGTAGCGAATGGAGGTCGCTGGGGGCAGAGGGTCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp CGGACCCTCTGCCCCCAGCGACCTCCATTCGCTACCTGTCGGGCAGGATGCCCAGCTTCCTGCGGTTGGTaGACACCAGCTTCACCGTCT +
Preference number: 4 (lower is better)
Translates to: RTLCPQRPPFATCRAGCPASCGW*TPASPS
Trigger: AGACGGTGAAGCTGGTGTGCACCAACCGCAGGAAGC...TGGGCATCCTGCCCGACAGGTAGCGAATGGAGGTCGCTGGGGGCAGAGGGTCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp GTGCATCCGCAGAGCCCACAGGGCTCGGACCCTCTGCCCCCAGCGACCTCCATTGCTTCCTGCGGTTGGTaGACACCAGCTTCACCGTCT +
Preference number: 4 (lower is better)
Translates to: VHPQSPQGSDPLPPATSIASCGW*TPASPS
Trigger: AGACGGTGAAGCTGGTGTGCACCAACCGCAGGAAGC...AATGGAGGTCGCTGGGGGCAGAGGGTCCGAGCCCTGTGGGCTCTGCGGATGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp CGGACCCTCTGCCCCCAGCGACCTCCATTCGCTACCTGTCGGGCAGGATGCCCATGGCATCCGTCAGGATaGTGGGGTAGGGAGGTTCTC +
Preference number: 4 (lower is better)
Translates to: RTLCPQRPPFATCRAGCPWHPSG*WGREVL
Trigger: GAGAACCTCCCTACCCCAGCATCCTGACGGATGCCA...TGGGCATCCTGCCCGACAGGTAGCGAATGGAGGTCGCTGGGGGCAGAGGGTCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp ACAGCCGTGACAGTGTGCCTGCCGGCTGGCGTGCCTTCCTTTCCTGCCCACCAGGCCTGGCAGAGATGCTaGATCCACTCGGCCATCTCG +
Preference number: 4 (lower is better)
Translates to: TAVTVCLPAGVPSFPAHQAWQRC*IHSAIS
Trigger: CGAGATGGCCGAGTGGATGCAGCATCTCTGCCAGGC...CTGGTGGGCAGGAAAGGAAGGCACGCCAGCCGGCAGGCACACTGTCACGGCTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp GCCGGGCACCTGATCTGGATCCCTGGAGTGGAGGGACCCTGTCTTAAGCCACACCCAGGCAGCAGGGTATaGAGGGGCTGGGAGCTACGC +
Preference number: 4 (lower is better)
Translates to: AGHLIWIPGVEGPCLKPHPGSRV*RGWELR
Trigger: GCGTAGCTCCCAGCCCCTGCATACCCTGCTGCCTGG...GTGTGGCTTAAGACAGGGTCCCTCCACTCCAGGGATCCAGATCAGGTGCCCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp TTAAGCCACACTCGGTGGTTCTGCCGCCCAGGGCAGGGGTGGACTGTAGGCTCCAGACGCAGTACTCCTTaGCCGGCTCGGTGGAGACGG +
Preference number: 4 (lower is better)
Translates to: LSHTRWFCRPGQGWTVGSRRSTP*PARWRR
Trigger: CCGTCTCCACCGAGCCGGGCAAGGAGTACTGCGTCT...GGAGCCTACAGTCCACCCCTGCCCTGGGCGGCAGAACCACCGAGTGTGGCTTAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp GTTCTCGGTGCCACTCGGCAGAAATTCTGCAGACTGAGGCGGAGGCCCGGGAGGCAGGATGCCCAGGGGTaGCGGGCACCTGATCTGGAT +
Preference number: 4 (lower is better)
Translates to: VLGATRQKFCRLRRRPGRQDAQG*RAPDLD
Trigger: ATCCAGATCAGGTGCCCGGCACCCCTGGGCATCCTG...CCTCCCGGGCCTCCGCCTCAGTCTGCAGAATTTCTGCCGAGTGGCACCGAGAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp GCAGGCAGCTGTGTGCGCAGTGATGGAGCTAGGAGGAGGAAACATGCGCAGACAACCTGTCGGGCAGGATaGCCAGGGGTGCCGGGCACC +
Preference number: 4 (lower is better)
Translates to: AGSCVRSDGARRRKHAQTTCRAG*PGVPGT
Trigger: GGTGCCCGGCACCCCTGGGCATCCTGCCCGACAGGT...TGTCTGCGCATGTTTCCTCCTCCTAGCTCCATCACTGCGCACACAGCTGCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp CGGACCCTCTGCCCCCAGCGACCTCCATTCGCTACCTGTCGGGCAGGATGCCCAACTCGGCAGAAATTCTaGAGACTGAGGCGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: RTLCPQRPPFATCRAGCPTRQKF*RLRRRP
Trigger: GGGCCTCCGCCTCAGTCTGCAGAATTTCTGCCGAGT...TGGGCATCCTGCCCGACAGGTAGCGAATGGAGGTCGCTGGGGGCAGAGGGTCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp CAGAGCCCACAGGGCTCGGACCCTCTGCCCCCAGCGACCTCCATTCGCTACCTGAGGCAGGCAGCTGTGTaGGCAGTGATGGAGCTAGGA +
Preference number: 4 (lower is better)
Translates to: QSPQGSDPLPPATSIRYLRQAAV*AVMELG
Trigger: TCCTAGCTCCATCACTGCGCACACAGCTGCCTGCCT...CAGGTAGCGAATGGAGGTCGCTGGGGGCAGAGGGTCCGAGCCCTGTGGGCTCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp CCACCCCCTTTGCTCCTCGGTGCTACAGGCACTGCCGGGTTGAGGGGACAGGCACCGTACAGCAGGGCGTaGTCCAGGTGCTCACACAGA +
Preference number: 4 (lower is better)
Translates to: PPPLLLGATGTAGLRGQAPYSRA*SRCSHR
Trigger: TCTGTGTGAGCACCTGGACCACGCCCTGCTGTACGG...TGCCTGTCCCCTCAACCCGGCAGTGCCTGTAGCACCGAGGAGCAAAGGGGGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp AACAGCCGTGACAGTGTGCCTGCCGGCTGGCGTGCCTTCCTTTCCTGCCCACCATCGTTGAAGGGGTTCTaGCGCTGGGTGGGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: NSRDSVPAGWRAFLSCPPSLKGF*RWVGLL
Trigger: CAGGAGCCCCACCCAGCGCCAGAACCCCTTCAACGA...TGGTGGGCAGGAAAGGAAGGCACGCCAGCCGGCAGGCACACTGTCACGGCTGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp GGTGTTCTCGGTGCCACTCGGCAGAAATTCTGCAGACTGAGGCGGAGGCCCGGGTCGTTGAAGGGGTTCTaGCGCTGGGTGGGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: GVLGATRQKFCRLRRRPGSLKGF*RWVGLL
Trigger: CAGGAGCCCCACCCAGCGCCAGAACCCCTTCAACGA...CCCGGGCCTCCGCCTCAGTCTGCAGAATTTCTGCCGAGTGGCACCGAGAACACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp ACAGCCGTGACAGTGTGCCTGCCGGCTGGCGTGCCTTCCTTTCCTGCCCACCAGTGGTGTGCACGGGGGTaGTGTCAGAGGAGGACACAG +
Preference number: 4 (lower is better)
Translates to: TAVTVCLPAGVPSFPAHQWCARG*CQRRTQ
Trigger: CTGTGTCCTCCTCTGACACCACCCCCGTGCACACCA...CTGGTGGGCAGGAAAGGAAGGCACGCCAGCCGGCAGGCACACTGTCACGGCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp GCCCACAGGGCTCGGACCCTCTGCCCCCAGCGACCTCCATTCGCTACCTGTCGGTTGGCACATTTCTTCTaGCTGCAGGCGGGGTGGAGT +
Preference number: 4 (lower is better)
Translates to: AHRARTLCPQRPPFATCRLAHFF*LQAGWS
Trigger: ACTCCACCCCGCCTGCAGCCAGAAGAAATGTGCCAA...CCGACAGGTAGCGAATGGAGGTCGCTGGGGGCAGAGGGTCCGAGCCCTGTGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375793.2
ENST00000375799.8
CDS-3UTR CCA 90 bp GGTGTTCTCGGTGCCACTCGGCAGAAATTCTGCAGACTGAGGCGGAGGCCCGGGCCCTCTCCCTCCTCCTaGGGGGAGGCAAGCATAGTG +
Preference number: 4 (lower is better)
Translates to: GVLGATRQKFCRLRRRPGPSPSS*GEASIV
Trigger: CACTATGCTTGCCTCCCCCCAGGAGGAGGGAGAGGG...CCCGGGCCTCCGCCTCAGTCTGCAGAATTTCTGCCGAGTGGCACCGAGAACACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375793.2
ENST00000375799.8
CDS-3UTR CCA 90 bp GATGGAGCTAGGAGGAGGAAACATGCGCAGACACCCCGTGTTCCCGCTTCCCCAGCTCGCTGCTCTCCGTaGTGCTGCTCGGCCCCTCTC +
Preference number: 4 (lower is better)
Translates to: DGARRRKHAQTPRVPASPARCSP*CCSAPL
Trigger: GAGAGGGGCCGAGCAGCACCACGGAGAGCAGCGAGC...TGGGGAAGCGGGAACACGGGGTGTCTGCGCATGTTTCCTCCTCCTAGCTCCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp AACAGCCGTGACAGTGTGCCTGCCGGCTGGCGTGCCTTCCTTTCCTGCCCACCACCGAAAGGACTGGTCTaGGGGCTCAGCACGGGAGCA +
Preference number: 4 (lower is better)
Translates to: NSRDSVPAGWRAFLSCPPPKGLV*GLSTGA
Trigger: TGCTCCCGTGCTGAGCCCCCAGACCAGTCCTTTCGG...TGGTGGGCAGGAAAGGAAGGCACGCCAGCCGGCAGGCACACTGTCACGGCTGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp CAGAGCCCACAGGGCTCGGACCCTCTGCCCCCAGCGACCTCCATTCGCTACCTGCCTGCAGGGTCATGGTaGCCGCCACCTGATGTAACA +
Preference number: 4 (lower is better)
Translates to: QSPQGSDPLPPATSIRYLPAGSW*PPPDVT
Trigger: TGTTACATCAGGTGGCGGCCACCATGACCCTGCAGG...CAGGTAGCGAATGGAGGTCGCTGGGGGCAGAGGGTCCGAGCCCTGTGGGCTCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp ACAGCCGTGACAGTGTGCCTGCCGGCTGGCGTGCCTTCCTTTCCTGCCCACCAGGGAACATGCAGCGGTTaGCCAAGCCCTGCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: TAVTVCLPAGVPSFPAHQGTCSG*PSPAGS
Trigger: TGACCCTGCAGGGCTTGGCCAACCGCTGCATGTTCC...CTGGTGGGCAGGAAAGGAAGGCACGCCAGCCGGCAGGCACACTGTCACGGCTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp GTTCTCGGTGCCACTCGGCAGAAATTCTGCAGACTGAGGCGGAGGCCCGGGAGGCCTGAGCCTCCCTCGTaGTATCCTCTAGGGGCCGAG +
Preference number: 4 (lower is better)
Translates to: VLGATRQKFCRLRRRPGRPEPPS*YPLGAE
Trigger: CTCGGCCCCTAGAGGATACCACGAGGGAGGCTCAGG...CCTCCCGGGCCTCCGCCTCAGTCTGCAGAATTTCTGCCGAGTGGCACCGAGAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp AACAGCCGTGACAGTGTGCCTGCCGGCTGGCGTGCCTTCCTTTCCTGCCCACCACCTGAGCCTCCCTCGTaGTATCCTCTAGGGGCCGAG +
Preference number: 4 (lower is better)
Translates to: NSRDSVPAGWRAFLSCPPPEPPS*YPLGAE
Trigger: CTCGGCCCCTAGAGGATACCACGAGGGAGGCTCAGG...TGGTGGGCAGGAAAGGAAGGCACGCCAGCCGGCAGGCACACTGTCACGGCTGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp GGTGTTCTCGGTGCCACTCGGCAGAAATTCTGCAGACTGAGGCGGAGGCCCGGGCCTGAGCCTCCCTCGTaGTATCCTCTAGGGGCCGAG +
Preference number: 4 (lower is better)
Translates to: GVLGATRQKFCRLRRRPGPEPPS*YPLGAE
Trigger: CTCGGCCCCTAGAGGATACCACGAGGGAGGCTCAGG...CCCGGGCCTCCGCCTCAGTCTGCAGAATTTCTGCCGAGTGGCACCGAGAACACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp CGGACCCTCTGCCCCCAGCGACCTCCATTCGCTACCTGTCGGGCAGGATGCCCATGGTCTCGCTTGAGCTaGCAGAGAACCTCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: RTLCPQRPPFATCRAGCPWSRLS*QRTSWV
Trigger: GACCCAGGAGGTTCTCTGCCAGCTCAAGCGAGACCA...TGGGCATCCTGCCCGACAGGTAGCGAATGGAGGTCGCTGGGGGCAGAGGGTCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp GGTGTTCTCGGTGCCACTCGGCAGAAATTCTGCAGACTGAGGCGGAGGCCCGGGAGACACGGGCTGGGCTaGTCTCGCTTGAGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: GVLGATRQKFCRLRRRPGRHGLG*SRLSWQ
Trigger: CTGCCAGCTCAAGCGAGACCAGCCCAGCCCGTGTCT...CCCGGGCCTCCGCCTCAGTCTGCAGAATTTCTGCCGAGTGGCACCGAGAACACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp GTGCATCCGCAGAGCCCACAGGGCTCGGACCCTCTGCCCCCAGCGACCTCCATTGTGCCAGCTTCTCCATaGTGGCATCCGTCAGGATGC +
Preference number: 4 (lower is better)
Translates to: VHPQSPQGSDPLPPATSIVPASP*WHPSGC
Trigger: GCATCCTGACGGATGCCACCATGGAGAAGCTGGCAC...AATGGAGGTCGCTGGGGGCAGAGGGTCCGAGCCCTGTGGGCTCTGCGGATGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp CCACCCCCTTTGCTCCTCGGTGCTACAGGCACTGCCGGGTTGAGGGGACAGGCATCGGAGAGAATGACCTaGAAGGCGTGGGGCCGATCC +
Preference number: 4 (lower is better)
Translates to: PPPLLLGATGTAGLRGQASERMT*KAWGRS
Trigger: GGATCGGCCCCACGCCTTCCAGGTCATTCTCTCCGA...TGCCTGTCCCCTCAACCCGGCAGTGCCTGTAGCACCGAGGAGCAAAGGGGGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp GGTGTTCTCGGTGCCACTCGGCAGAAATTCTGCAGACTGAGGCGGAGGCCCGGGCTGGGAGCTACGCCCTaGGGGATGACCCCTTTGGAC +
Preference number: 4 (lower is better)
Translates to: GVLGATRQKFCRLRRRPGLGATP*GMTPLD
Trigger: GTCCAAAGGGGTCATCCCCCAGGGCGTAGCTCCCAG...CCCGGGCCTCCGCCTCAGTCTGCAGAATTTCTGCCGAGTGGCACCGAGAACACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp CTCGGACCCTCTGCCCCCAGCGACCTCCATTCGCTACCTGTCGGGCAGGATGCCCCTGATCTGGATCCCTaGAGTGGAGGGACCCTGTCT +
Preference number: 4 (lower is better)
Translates to: LGPSAPSDLHSLPVGQDAPDLDP*SGGTLS
Trigger: AGACAGGGTCCCTCCACTCCAGGGATCCAGATCAGG...GGCATCCTGCCCGACAGGTAGCGAATGGAGGTCGCTGGGGGCAGAGGGTCCGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp AACAGCCGTGACAGTGTGCCTGCCGGCTGGCGTGCCTTCCTTTCCTGCCCACCAGCCGGGCACCTGATCTaGATCCCTGGAGTGGAGGGA +
Preference number: 4 (lower is better)
Translates to: NSRDSVPAGWRAFLSCPPAGHLI*IPGVEG
Trigger: TCCCTCCACTCCAGGGATCCAGATCAGGTGCCCGGC...TGGTGGGCAGGAAAGGAAGGCACGCCAGCCGGCAGGCACACTGTCACGGCTGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp TTAAGCCACACTCGGTGGTTCTGCCGCCCAGGGCAGGGGTGGACTGTAGGCTCCACGAACAAGGATGGCTaGGCACTCAGGGCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: LSHTRWFCRPGQGWTVGSTNKDG*ALRAPA
Trigger: GGCTGGGGCCCTGAGTGCCCAGCCATCCTTGTTCGT...GGAGCCTACAGTCCACCCCTGCCCTGGGCGGCAGAACCACCGAGTGTGGCTTAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp TTAAGCCACACTCGGTGGTTCTGCCGCCCAGGGCAGGGGTGGACTGTAGGCTCCTGGATGCCAGGCTGGTaGGCTCCGCCCTTCTCCAAG +
Preference number: 4 (lower is better)
Translates to: LSHTRWFCRPGQGWTVGSWMPGW*APPFSK
Trigger: CTTGGAGAAGGGCGGAGCCCACCAGCCTGGCATCCA...GGAGCCTACAGTCCACCCCTGCCCTGGGCGGCAGAACCACCGAGTGTGGCTTAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR TCA 90 bp GTTCTCGGTGCCACTCGGCAGAAATTCTGCAGACTGAGGCGGAGGCCCGGGAGGCCAAGGAGTTCTCGTTaGGGGCCAGGTACAGCCAGG +
Preference number: 4 (lower is better)
Translates to: VLGATRQKFCRLRRRPGRPRSSR*GPGTAR
Trigger: CCTGGCTGTACCTGGCCCTCAACGAGAACTCCTTGG...CCTCCCGGGCCTCCGCCTCAGTCTGCAGAATTTCTGCCGAGTGGCACCGAGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR TCA 90 bp CTTCCCCAGGAGGCTCTTGACGAAACTCTAGGGAAGGGCCTGGCTCCAGCCAAGGAGGGACAGACTGTCTaGGCCGTGGACCGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: LPQEALDETLGKGLAPAKEGQTV*AVDRAG
Trigger: CCCAGCTCGGTCCACGGCTCAGACAGTCTGTCCCTC...CTTGGCTGGAGCCAGGCCCTTCCCTAGAGTTTCGTCAAGAGCCTCCTGGGGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR TCA 90 bp TCCCGCTTCCCCACGTGGCCAGGAGAGTGTTCAAACACGAACAAGGATGGCTGGCTGCCGGCTCCTCGTTaGAGGGGTTCTGGCGCTGGG +
Preference number: 4 (lower is better)
Translates to: SRFPTWPGECSNTNKDGWLPAPR*RGSGAG
Trigger: CCCAGCGCCAGAACCCCTTCAACGAGGAGCCGGCAG...CCAGCCATCCTTGTTCGTGTTTGAACACTCTCCTGGCCACGTGGGGAAGCGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR TCA 90 bp GTCAGAAGATGTCAACATGGATGCCAGGCTGGTGGGCTCCGCCCTTCTCCAAGCGCCGGTCGGAGAGAATaGCCTGGAAGGCGTGGGGCC +
Preference number: 4 (lower is better)
Translates to: VRRCQHGCQAGGLRPSPSAGRRE*PGRRGA
Trigger: GGCCCCACGCCTTCCAGGTCATTCTCTCCGACCGGC...GCTTGGAGAAGGGCGGAGCCCACCAGCCTGGCATCCATGTTGACATCTTCTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR TCA 90 bp AACAGCCGTGACAGTGTGCCTGCCGGCTGGCGTGCCTTCCTTTCCTGCCCACCAAGAAATTCTGCAGACTaGGGCGGAGGCCCGGGAGGA +
Preference number: 4 (lower is better)
Translates to: NSRDSVPAGWRAFLSCPPRNSAD*GGGPGG
Trigger: TCCTCCCGGGCCTCCGCCTCAGTCTGCAGAATTTCT...TGGTGGGCAGGAAAGGAAGGCACGCCAGCCGGCAGGCACACTGTCACGGCTGTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp GGTGTTCTCGGTGCCACTCGGCAGAAATTCTGCAGACTGAGGCGGAGGCCCGGGGGAGGACACAGTCTCTaGCGGCTCCTCGTTGAAGGG +
Preference number: 4 (lower is better)
Translates to: GVLGATRQKFCRLRRRPGGGHSL*RLLVEG
Trigger: CCCTTCAACGAGGAGCCGGCAGAGACTGTGTCCTCC...CCCGGGCCTCCGCCTCAGTCTGCAGAATTTCTGCCGAGTGGCACCGAGAACACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp GTGCATCCGCAGAGCCCACAGGGCTCGGACCCTCTGCCCCCAGCGACCTCCATTCTGTCACCGTCCCCCTaGTTGGCACATTTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: VHPQSPQGSDPLPPATSILSPSP*LAHFFW
Trigger: CCAGAAGAAATGTGCCAAGCAGGGGGACGGTGACAG...AATGGAGGTCGCTGGGGGCAGAGGGTCCGAGCCCTGTGGGCTCTGCGGATGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000375793.2
ENST00000375799.8
CDS-3UTR GCA 90 bp GCAGGCAGCTGTGTGCGCAGTGATGGAGCTAGGAGGAGGAAACATGCGCAGACAGGCTTGGGCTGCCGTTaGGGCTGTCACCGTCCCCCT +
Preference number: 4 (lower is better)
Translates to: AGSCVRSDGARRRKHAQTGLGCR*GCHRPP
Trigger: AGGGGGACGGTGACAGCCGCAACGGCAGCCCAAGCC...TGTCTGCGCATGTTTCCTCCTCCTAGCTCCATCACTGCGCACACAGCTGCCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375793.2
ENST00000375799.8
CDS-3UTR GCA 90 bp GTCAGAAGATGTCAACATGGATGCCAGGCTGGTGGGCTCCGCCCTTCTCCAAGCCACGGGAGCACCAGGTaGTGGGGTCCAGCTGCCCGT +
Preference number: 4 (lower is better)
Translates to: VRRCQHGCQAGGLRPSPSHGSTR*WGPAAR
Trigger: ACGGGCAGCTGGACCCCAGCACCTGGTGCTCCCGTG...GCTTGGAGAAGGGCGGAGCCCACCAGCCTGGCATCCATGTTGACATCTTCTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp GGTGTTCTCGGTGCCACTCGGCAGAAATTCTGCAGACTGAGGCGGAGGCCCGGGAGGTTGCCCTCCATGTaGCCGGTGCTCATCCGGATC +
Preference number: 4 (lower is better)
Translates to: GVLGATRQKFCRLRRRPGRLPSM*PVLIRI
Trigger: GATCCGGATGAGCACCGGGCACATGGAGGGCAACCT...CCCGGGCCTCCGCCTCAGTCTGCAGAATTTCTGCCGAGTGGCACCGAGAACACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp CCACCCCCTTTGCTCCTCGGTGCTACAGGCACTGCCGGGTTGAGGGGACAGGCAAGCACGTACAGCAGCTaGAGGTTGCCCTCCATGTGC +
Preference number: 4 (lower is better)
Translates to: PPPLLLGATGTAGLRGQASTYSS*RLPSMC
Trigger: GCACATGGAGGGCAACCTGCAGCTGCTGTACGTGCT...TGCCTGTCCCCTCAACCCGGCAGTGCCTGTAGCACCGAGGAGCAAAGGGGGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp CGGACCCTCTGCCCCCAGCGACCTCCATTCGCTACCTGTCGGGCAGGATGCCCAGCAGAAACTGCTTCCTaGGGTTGGTGCACACCAGCT +
Preference number: 4 (lower is better)
Translates to: RTLCPQRPPFATCRAGCPAETAS*GWCTPA
Trigger: AGCTGGTGTGCACCAACCGCAGGAAGCAGTTTCTGC...TGGGCATCCTGCCCGACAGGTAGCGAATGGAGGTCGCTGGGGGCAGAGGGTCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp GTGCATCCGCAGAGCCCACAGGGCTCGGACCCTCTGCCCCCAGCGACCTCCATTGCAGAAACTGCTTCCTaGGGTTGGTGCACACCAGCT +
Preference number: 4 (lower is better)
Translates to: VHPQSPQGSDPLPPATSIAETAS*GWCTPA
Trigger: AGCTGGTGTGCACCAACCGCAGGAAGCAGTTTCTGC...AATGGAGGTCGCTGGGGGCAGAGGGTCCGAGCCCTGTGGGCTCTGCGGATGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp GCCCACAGGGCTCGGACCCTCTGCCCCCAGCGACCTCCATTCGCTACCTGTCGGCACAAATTTGGCCAGTaGCAGCTTCTCCATGGTGGC +
Preference number: 4 (lower is better)
Translates to: AHRARTLCPQRPPFATCRHKFGQ*QLLHGG
Trigger: GCCACCATGGAGAAGCTGGCACTGGCCAAATTTGTG...CCGACAGGTAGCGAATGGAGGTCGCTGGGGGCAGAGGGTCCGAGCCCTGTGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp GGTGTTCTCGGTGCCACTCGGCAGAAATTCTGCAGACTGAGGCGGAGGCCCGGGTGCCCAGGTAGGAGGTaGCCGCCTTGTAGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: GVLGATRQKFCRLRRRPGCPGRR*PPCSAA
Trigger: TGCTGCACTACAAGGCGGGCACCTCCTACCTGGGCA...CCCGGGCCTCCGCCTCAGTCTGCAGAATTTCTGCCGAGTGGCACCGAGAACACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp GTTCTCGGTGCCACTCGGCAGAAATTCTGCAGACTGAGGCGGAGGCCCGGGAGGGCCTGGCAGAGATGCTaGATCCACTCGGCCATCTCG +
Preference number: 4 (lower is better)
Translates to: VLGATRQKFCRLRRRPGRAWQRC*IHSAIS
Trigger: CGAGATGGCCGAGTGGATGCAGCATCTCTGCCAGGC...CCTCCCGGGCCTCCGCCTCAGTCTGCAGAATTTCTGCCGAGTGGCACCGAGAAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp CTTCCCCAGGAGGCTCTTGACGAAACTCTAGGGAAGGGCCTGGCTCCAGCCAAGCCAGGCAGCAGGGTATaGAGGGGCTGGGAGCTACGC +
Preference number: 4 (lower is better)
Translates to: LPQEALDETLGKGLAPAKPGSRV*RGWELR
Trigger: GCGTAGCTCCCAGCCCCTGCATACCCTGCTGCCTGG...CTTGGCTGGAGCCAGGCCCTTCCCTAGAGTTTCGTCAAGAGCCTCCTGGGGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp CCTGGCTCCAGCCAAGCAGGGGACAGTCAGAAGATGTCAACATGGATGCCAGGCCACACTCGGTGGTTCTaGCGCCCAGGGCAGGGGTGG +
Preference number: 4 (lower is better)
Translates to: PGSSQAGDSQKMSTWMPGHTRWF*RPGQGW
Trigger: CCACCCCTGCCCTGGGCGGCAGAACCACCGAGTGTG...GCCTGGCATCCATGTTGACATCTTCTGACTGTCCCCTGCTTGGCTGGAGCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp CCACCCCCTTTGCTCCTCGGTGCTACAGGCACTGCCGGGTTGAGGGGACAGGCAACTCGGCAGAAATTCTaGAGACTGAGGCGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: PPPLLLGATGTAGLRGQATRQKF*RLRRRP
Trigger: GGGCCTCCGCCTCAGTCTGCAGAATTTCTGCCGAGT...TGCCTGTCCCCTCAACCCGGCAGTGCCTGTAGCACCGAGGAGCAAAGGGGGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp TCCCGCTTCCCCACGTGGCCAGGAGAGTGTTCAAACACGAACAAGGATGGCTGGGCTGGGTGGGGCTCCTaGTGGAGGCCTTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: SRFPTWPGECSNTNKDGWAGWGS*WRPCCW
Trigger: CCAGCAGCAAGGCCTCCACCAGGAGCCCCACCCAGC...CCAGCCATCCTTGTTCGTGTTTGAACACTCTCCTGGCCACGTGGGGAAGCGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp CCTGGCTCCAGCCAAGCAGGGGACAGTCAGAAGATGTCAACATGGATGCCAGGCGGTTCTGGCGCTGGGTaGGGCTCCTGGTGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: PGSSQAGDSQKMSTWMPGGSGAG*GSWWRP
Trigger: AGGCCTCCACCAGGAGCCCCACCCAGCGCCAGAACC...GCCTGGCATCCATGTTGACATCTTCTGACTGTCCCCTGCTTGGCTGGAGCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp GGTGTTCTCGGTGCCACTCGGCAGAAATTCTGCAGACTGAGGCGGAGGCCCGGGCCTTCTCCTGAGAGGTaGTGTGCACGGGGGTGGTGT +
Preference number: 4 (lower is better)
Translates to: GVLGATRQKFCRLRRRPGPSPER*CARGWC
Trigger: ACACCACCCCCGTGCACACCACCTCTCAGGAGAAGG...CCCGGGCCTCCGCCTCAGTCTGCAGAATTTCTGCCGAGTGGCACCGAGAACACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp CTCGGTGCCACTCGGCAGAAATTCTGCAGACTGAGGCGGAGGCCCGGGAGGAGGGCCCCAAGCGCTCCATaGAGGTGTCCTTCATCTCAG +
Preference number: 4 (lower is better)
Translates to: LGATRQKFCRLRRRPGRRAPSAP*RCPSSQ
Trigger: CTGAGATGAAGGACACCTCCATGGAGCGCTTGGGGC...CCTCCTCCCGGGCCTCCGCCTCAGTCTGCAGAATTTCTGCCGAGTGGCACCGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp GGTGTTCTCGGTGCCACTCGGCAGAAATTCTGCAGACTGAGGCGGAGGCCCGGGAGCCCTGCAGGGTCATaGTGGCCGCCACCTGATGTA +
Preference number: 4 (lower is better)
Translates to: GVLGATRQKFCRLRRRPGSPAGS*WPPPDV
Trigger: TACATCAGGTGGCGGCCACCATGACCCTGCAGGGCT...CCCGGGCCTCCGCCTCAGTCTGCAGAATTTCTGCCGAGTGGCACCGAGAACACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp TTAAGCCACACTCGGTGGTTCTGCCGCCCAGGGCAGGGGTGGACTGTAGGCTCCGGAACATGCAGCGGTTaGCCAAGCCCTGCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: LSHTRWFCRPGQGWTVGSGTCSG*PSPAGS
Trigger: TGACCCTGCAGGGCTTGGCCAACCGCTGCATGTTCC...GGAGCCTACAGTCCACCCCTGCCCTGGGCGGCAGAACCACCGAGTGTGGCTTAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp CTCGGACCCTCTGCCCCCAGCGACCTCCATTCGCTACCTGTCGGGCAGGATGCCCTGAACTCCGAGGAATaGACCATCTCCGAAGGGCTC +
Preference number: 4 (lower is better)
Translates to: LGPSAPSDLHSLPVGQDALNSEE*TISEGL
Trigger: GAGCCCTTCGGAGATGGTCCATTCCTCGGAGTTCAG...GGCATCCTGCCCGACAGGTAGCGAATGGAGGTCGCTGGGGGCAGAGGGTCCGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp GTGCATCCGCAGAGCCCACAGGGCTCGGACCCTCTGCCCCCAGCGACCTCCATTAGCTTCACCGTCTGCTaGTCAAGGCCAACCGACACA +
Preference number: 4 (lower is better)
Translates to: VHPQSPQGSDPLPPATSISFTVC*SRPTDT
Trigger: TGTGTCGGTTGGCCTTGACCAGCAGACGGTGAAGCT...AATGGAGGTCGCTGGGGGCAGAGGGTCCGAGCCCTGTGGGCTCTGCGGATGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp CAGAGCCCACAGGGCTCGGACCCTCTGCCCCCAGCGACCTCCATTCGCTACCTGAGCTTCACCGTCTGCTaGTCAAGGCCAACCGACACA +
Preference number: 4 (lower is better)
Translates to: QSPQGSDPLPPATSIRYLSFTVC*SRPTDT
Trigger: TGTGTCGGTTGGCCTTGACCAGCAGACGGTGAAGCT...CAGGTAGCGAATGGAGGTCGCTGGGGGCAGAGGGTCCGAGCCCTGTGGGCTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp CCACCCCCTTTGCTCCTCGGTGCTACAGGCACTGCCGGGTTGAGGGGACAGGCAACTGCTTCCTGCGGTTaGTGCACACCAGCTTCACCG +
Preference number: 4 (lower is better)
Translates to: PPPLLLGATGTAGLRGQATASCG*CTPASP
Trigger: CGGTGAAGCTGGTGTGCACCAACCGCAGGAAGCAGT...TGCCTGTCCCCTCAACCCGGCAGTGCCTGTAGCACCGAGGAGCAAAGGGGGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp CCACCCCCTTTGCTCCTCGGTGCTACAGGCACTGCCGGGTTGAGGGGACAGGCACCAGCTTCTCCATGGTaGCATCCGTCAGGATGCTGG +
Preference number: 4 (lower is better)
Translates to: PPPLLLGATGTAGLRGQAPASPW*HPSGCW
Trigger: CCAGCATCCTGACGGATGCCACCATGGAGAAGCTGG...TGCCTGTCCCCTCAACCCGGCAGTGCCTGTAGCACCGAGGAGCAAAGGGGGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp GTTCTCGGTGCCACTCGGCAGAAATTCTGCAGACTGAGGCGGAGGCCCGGGAGGCCAGGGACTCGTCTGTaGGGTCCTCCCAGTGCACAA +
Preference number: 4 (lower is better)
Translates to: VLGATRQKFCRLRRRPGRPGTRL*GPPSAQ
Trigger: TTGTGCACTGGGAGGACCCCACAGACGAGTCCCTGG...CCTCCCGGGCCTCCGCCTCAGTCTGCAGAATTTCTGCCGAGTGGCACCGAGAAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp GCAGGCAGCTGTGTGCGCAGTGATGGAGCTAGGAGGAGGAAACATGCGCAGACACGTGGGGCCGATCCGTaGTGTTGGCTCTCCGGCAGC +
Preference number: 4 (lower is better)
Translates to: AGSCVRSDGARRRKHAQTRGADP*CWLSGS
Trigger: GCTGCCGGAGAGCCAACACCACGGATCGGCCCCACG...TGTCTGCGCATGTTTCCTCCTCCTAGCTCCATCACTGCGCACACAGCTGCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp GCCCACAGGGCTCGGACCCTCTGCCCCCAGCGACCTCCATTCGCTACCTGTCGGCGGAAGAAGCTGGTCTaGCAATCCTCATGGCACGTA +
Preference number: 4 (lower is better)
Translates to: AHRARTLCPQRPPFATCRRKKLV*QSSWHV
Trigger: TACGTGCCATGAGGATTGCCAGACCAGCTTCTTCCG...CCGACAGGTAGCGAATGGAGGTCGCTGGGGGCAGAGGGTCCGAGCCCTGTGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp GCCCACAGGGCTCGGACCCTCTGCCCCCAGCGACCTCCATTCGCTACCTGTCGGAAGAGCGGAAGAAGCTaGTCTGGCAATCCTCATGGC +
Preference number: 4 (lower is better)
Translates to: AHRARTLCPQRPPFATCRKSGRS*SGNPHG
Trigger: GCCATGAGGATTGCCAGACCAGCTTCTTCCGCTCTT...CCGACAGGTAGCGAATGGAGGTCGCTGGGGGCAGAGGGTCCGAGCCCTGTGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp CTCGGTGCCACTCGGCAGAAATTCTGCAGACTGAGGCGGAGGCCCGGGAGGAGGAGCTGCTGGCTGTCCTaGGAGAACTCCAAGACGCAG +
Preference number: 4 (lower is better)
Translates to: LGATRQKFCRLRRRPGRRSCWLS*ENSKTQ
Trigger: CTGCGTCTTGGAGTTCTCCCAGGACAGCCAGCAGCT...CCTCCTCCCGGGCCTCCGCCTCAGTCTGCAGAATTTCTGCCGAGTGGCACCGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp CGGACCCTCTGCCCCCAGCGACCTCCATTCGCTACCTGTCGGGCAGGATGCCCATCTGGATCCCTGGAGTaGAGGGACCCTGTCTTAAGC +
Preference number: 4 (lower is better)
Translates to: RTLCPQRPPFATCRAGCPSGSLE*RDPVLS
Trigger: GCTTAAGACAGGGTCCCTCCACTCCAGGGATCCAGA...TGGGCATCCTGCCCGACAGGTAGCGAATGGAGGTCGCTGGGGGCAGAGGGTCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp CGGACCCTCTGCCCCCAGCGACCTCCATTCGCTACCTGTCGGGCAGGATGCCCAGGGGTCCCGCCCTCCTaGTTCTTTTGTTCGTCCTTA +
Preference number: 4 (lower is better)
Translates to: RTLCPQRPPFATCRAGCPGVPPS*FFCSSL
Trigger: TAAGGACGAACAAAAGAACCAGGAGGGCGGGACCCC...TGGGCATCCTGCCCGACAGGTAGCGAATGGAGGTCGCTGGGGGCAGAGGGTCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR TCA 90 bp GCCGGGCACCTGATCTGGATCCCTGGAGTGGAGGGACCCTGTCTTAAGCCACACCCAAGGAGTTCTCGTTaGGGGCCAGGTACAGCCAGG +
Preference number: 4 (lower is better)
Translates to: AGHLIWIPGVEGPCLKPHPRSSR*GPGTAR
Trigger: CCTGGCTGTACCTGGCCCTCAACGAGAACTCCTTGG...GTGTGGCTTAAGACAGGGTCCCTCCACTCCAGGGATCCAGATCAGGTGCCCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR TCA 90 bp TCTGGCGAGGCAGGCAGCTGTGTGCGCAGTGATGGAGCTAGGAGGAGGAAACATGCCTCCTCCTTCTCCTaGGAGGTGGTGTGCACGGGG +
Preference number: 4 (lower is better)
Translates to: SGEAGSCVRSDGARRRKHASSFS*EVVCTG
Trigger: CCCCGTGCACACCACCTCTCAGGAGAAGGAGGAGGC...ATGTTTCCTCCTCCTAGCTCCATCACTGCGCACACAGCTGCCTGCCTCGCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR TCA 90 bp CTCGGACCCTCTGCCCCCAGCGACCTCCATTCGCTACCTGTCGGGCAGGATGCCGAAGTCCATTGGGGCTaGAAGCCCCTCACTAAAGTC +
Preference number: 4 (lower is better)
Translates to: LGPSAPSDLHSLPVGQDAEVHWG*KPLTKV
Trigger: GACTTTAGTGAGGGGCTTTCAGCCCCAATGGACTTC...GGCATCCTGCCCGACAGGTAGCGAATGGAGGTCGCTGGGGGCAGAGGGTCCGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR TCA 90 bp TGTGTGCGCAGTGATGGAGCTAGGAGGAGGAAACATGCGCAGACACCCCGTGTTACACAGGCCCCTCCCTaGCCAGGGACAGCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: CVRSDGARRRKHAQTPRVTQAPP*PGTAGP
Trigger: AGGCCCAGCTGTCCCTGGTCAGGGAGGGGCCTGTGT...AACACGGGGTGTCTGCGCATGTTTCCTCCTCCTAGCTCCATCACTGCGCACACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR TCA 90 bp GCCGGGCACCTGATCTGGATCCCTGGAGTGGAGGGACCCTGTCTTAAGCCACACTGGGCTGGTCTCGCTTaGGCTGGCAGAGAACCTCCT +
Preference number: 4 (lower is better)
Translates to: AGHLIWIPGVEGPCLKPHWAGLA*AGREPP
Trigger: AGGAGGTTCTCTGCCAGCTCAAGCGAGACCAGCCCA...GTGTGGCTTAAGACAGGGTCCCTCCACTCCAGGGATCCAGATCAGGTGCCCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR TCA 90 bp TGTGTGCGCAGTGATGGAGCTAGGAGGAGGAAACATGCGCAGACACCCCGTGTTCGGTGGAGACGGCGCTaGTGTCGCCCAGCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: CVRSDGARRRKHAQTPRVRWRRR*CRPAWL
Trigger: CAGCCAAGCTGGGCGACATCAGCGCCGTCTCCACCG...AACACGGGGTGTCTGCGCATGTTTCCTCCTCCTAGCTCCATCACTGCGCACACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp GTCAGAAGATGTCAACATGGATGCCAGGCTGGTGGGCTCCGCCCTTCTCCAAGCGCCCAAGGCTTGGGCTaGCGTTGCGGCTGTCACCGT +
Preference number: 4 (lower is better)
Translates to: VRRCQHGCQAGGLRPSPSAQGLG*RCGCHR
Trigger: ACGGTGACAGCCGCAACGGCAGCCCAAGCCTTGGGC...GCTTGGAGAAGGGCGGAGCCCACCAGCCTGGCATCCATGTTGACATCTTCTGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375793.2
ENST00000375799.8
CDS-3UTR GCA 90 bp CCTGGCTCCAGCCAAGCAGGGGACAGTCAGAAGATGTCAACATGGATGCCAGGCGCCCAAGGCTTGGGCTaGCGTTGCGGCTGTCACCGT +
Preference number: 4 (lower is better)
Translates to: PGSSQAGDSQKMSTWMPGAQGLG*RCGCHR
Trigger: ACGGTGACAGCCGCAACGGCAGCCCAAGCCTTGGGC...GCCTGGCATCCATGTTGACATCTTCTGACTGTCCCCTGCTTGGCTGGAGCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375793.2
ENST00000375799.8
CDS-3UTR GCA 90 bp CCTGGCTCCAGCCAAGCAGGGGACAGTCAGAAGATGTCAACATGGATGCCAGGCTGCTCTCCGTGGTGCTaGTCGGCCCCTCTCCCTCCT +
Preference number: 4 (lower is better)
Translates to: PGSSQAGDSQKMSTWMPGCSPWC*SAPLPP
Trigger: AGGAGGGAGAGGGGCCGAGCAGCACCACGGAGAGCA...GCCTGGCATCCATGTTGACATCTTCTGACTGTCCCCTGCTTGGCTGGAGCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp GGTGTTCTCGGTGCCACTCGGCAGAAATTCTGCAGACTGAGGCGGAGGCCCGGGGGGCTACTAGGAACATaGAGCGGTTGGCCAAGCCCT +
Preference number: 4 (lower is better)
Translates to: GVLGATRQKFCRLRRRPGGLLGT*SGWPSP
Trigger: AGGGCTTGGCCAACCGCTGCATGTTCCTAGTAGCCC...CCCGGGCCTCCGCCTCAGTCTGCAGAATTTCTGCCGAGTGGCACCGAGAACACC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp AACAGCCGTGACAGTGTGCCTGCCGGCTGGCGTGCCTTCCTTTCCTGCCCACCAGCTTCCTGCGGTTGGTaGACACCAGCTTCACCGTCT +
Preference number: 4 (lower is better)
Translates to: NSRDSVPAGWRAFLSCPPASCGW*TPASPS
Trigger: AGACGGTGAAGCTGGTGTGCACCAACCGCAGGAAGC...TGGTGGGCAGGAAAGGAAGGCACGCCAGCCGGCAGGCACACTGTCACGGCTGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp ACAGCCGTGACAGTGTGCCTGCCGGCTGGCGTGCCTTCCTTTCCTGCCCACCAGGCAGAAACTGCTTCCTaGGGTTGGTGCACACCAGCT +
Preference number: 4 (lower is better)
Translates to: TAVTVCLPAGVPSFPAHQAETAS*GWCTPA
Trigger: AGCTGGTGTGCACCAACCGCAGGAAGCAGTTTCTGC...CTGGTGGGCAGGAAAGGAAGGCACGCCAGCCGGCAGGCACACTGTCACGGCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp GTGCATCCGCAGAGCCCACAGGGCTCGGACCCTCTGCCCCCAGCGACCTCCATTCACAAATTTGGCCAGTaGCAGCTTCTCCATGGTGGC +
Preference number: 4 (lower is better)
Translates to: VHPQSPQGSDPLPPATSIHKFGQ*QLLHGG
Trigger: GCCACCATGGAGAAGCTGGCACTGGCCAAATTTGTG...AATGGAGGTCGCTGGGGGCAGAGGGTCCGAGCCCTGTGGGCTCTGCGGATGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp GCAGTGATGGAGCTAGGAGGAGGAAACATGCGCAGACACCCCGTGTTCCCGCTTACAGCCGTGACAGTGTaGCTGCCGGCTGGCGTGCCT +
Preference number: 4 (lower is better)
Translates to: AVMELGGGNMRRHPVFPLTAVTV*LPAGVP
Trigger: AGGCACGCCAGCCGGCAGGCACACTGTCACGGCTGT...AAGCGGGAACACGGGGTGTCTGCGCATGTTTCCTCCTCCTAGCTCCATCACTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp CTCCAGCCAAGCAGGGGACAGTCAGAAGATGTCAACATGGATGCCAGGCTGGTGCACACTCGGTGGTTCTaGCGCCCAGGGCAGGGGTGG +
Preference number: 4 (lower is better)
Translates to: LQPSRGQSEDVNMDARLVHTRWF*RPGQGW
Trigger: CCACCCCTGCCCTGGGCGGCAGAACCACCGAGTGTG...CACCAGCCTGGCATCCATGTTGACATCTTCTGACTGTCCCCTGCTTGGCTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp TCTGGCGAGGCAGGCAGCTGTGTGCGCAGTGATGGAGCTAGGAGGAGGAAACATAGGGCTCGGACCCTCTaGCCCCAGCGACCTCCATTC +
Preference number: 4 (lower is better)
Translates to: SGEAGSCVRSDGARRRKHRARTL*PQRPPF
Trigger: GAATGGAGGTCGCTGGGGGCAGAGGGTCCGAGCCCT...ATGTTTCCTCCTCCTAGCTCCATCACTGCGCACACAGCTGCCTGCCTCGCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp TTAAGCCACACTCGGTGGTTCTGCCGCCCAGGGCAGGGGTGGACTGTAGGCTCCACTCGGCAGAAATTCTaGAGACTGAGGCGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: LSHTRWFCRPGQGWTVGSTRQKF*RLRRRP
Trigger: GGGCCTCCGCCTCAGTCTGCAGAATTTCTGCCGAGT...GGAGCCTACAGTCCACCCCTGCCCTGGGCGGCAGAACCACCGAGTGTGGCTTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp CAGAGCCCACAGGGCTCGGACCCTCTGCCCCCAGCGACCTCCATTCGCTACCTGGGATGGTGTTCTCGGTaGCACTCGGCAGAAATTCTG +
Preference number: 4 (lower is better)
Translates to: QSPQGSDPLPPATSIRYLGWCSR*HSAEIL
Trigger: CAGAATTTCTGCCGAGTGGCACCGAGAACACCATCC...CAGGTAGCGAATGGAGGTCGCTGGGGGCAGAGGGTCCGAGCCCTGTGGGCTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp GCAGTGATGGAGCTAGGAGGAGGAAACATGCGCAGACACCCCGTGTTCCCGCTTCGGTGCTACAGGCACTaGCGGGTTGAGGGGACAGGC +
Preference number: 4 (lower is better)
Translates to: AVMELGGGNMRRHPVFPLRCYRH*RVEGTG
Trigger: GCCTGTCCCCTCAACCCGGCAGTGCCTGTAGCACCG...AAGCGGGAACACGGGGTGTCTGCGCATGTTTCCTCCTCCTAGCTCCATCACTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp TCCCGCTTCCCCACGTGGCCAGGAGAGTGTTCAAACACGAACAAGGATGGCTGGCGGTGCTACAGGCACTaGCGGGTTGAGGGGACAGGC +
Preference number: 4 (lower is better)
Translates to: SRFPTWPGECSNTNKDGWRCYRH*RVEGTG
Trigger: GCCTGTCCCCTCAACCCGGCAGTGCCTGTAGCACCG...CCAGCCATCCTTGTTCGTGTTTGAACACTCTCCTGGCCACGTGGGGAAGCGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp GTTCTCGGTGCCACTCGGCAGAAATTCTGCAGACTGAGGCGGAGGCCCGGGAGGAGATGTCAACATGGATaGCAGGCTGGTGGGCTCCGC +
Preference number: 4 (lower is better)
Translates to: VLGATRQKFCRLRRRPGRRCQHG*QAGGLR
Trigger: GCGGAGCCCACCAGCCTGGCATCCATGTTGACATCT...CCTCCCGGGCCTCCGCCTCAGTCTGCAGAATTTCTGCCGAGTGGCACCGAGAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp CTCGGACCCTCTGCCCCCAGCGACCTCCATTCGCTACCTGTCGGGCAGGATGCCTGTAGGACCTTGTCATaGTTCCGGATGGCAGGGATC +
Preference number: 4 (lower is better)
Translates to: LGPSAPSDLHSLPVGQDACRTLS*FRMAGI
Trigger: GATCCCTGCCATCCGGAACCATGACAAGGTCCTACA...GGCATCCTGCCCGACAGGTAGCGAATGGAGGTCGCTGGGGGCAGAGGGTCCGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp TGTGTGCGCAGTGATGGAGCTAGGAGGAGGAAACATGCGCAGACACCCCGTGTTGGCTGCGCCCCAGGTTaGTGGCCACGTGCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: CVRSDGARRRKHAQTPRVGCAPG*WPRAAA
Trigger: TGCTGCAGCACGTGGCCACCAACCTGGGGCGCAGCC...AACACGGGGTGTCTGCGCATGTTTCCTCCTCCTAGCTCCATCACTGCGCACACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp ACAGCCGTGACAGTGTGCCTGCCGGCTGGCGTGCCTTCCTTTCCTGCCCACCAGTTGGCACATTTCTTCTaGCTGCAGGCGGGGTGGAGT +
Preference number: 4 (lower is better)
Translates to: TAVTVCLPAGVPSFPAHQLAHFF*LQAGWS
Trigger: ACTCCACCCCGCCTGCAGCCAGAAGAAATGTGCCAA...CTGGTGGGCAGGAAAGGAAGGCACGCCAGCCGGCAGGCACACTGTCACGGCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375793.2
ENST00000375799.8
CDS-3UTR CCA 90 bp TGTGTGCGCAGTGATGGAGCTAGGAGGAGGAAACATGCGCAGACACCCCGTGTTGTCCCGCCCAAGGCTTaGGCTGCCGTTGCGGCTGTC +
Preference number: 4 (lower is better)
Translates to: CVRSDGARRRKHAQTPRVVPPKA*AAVAAV
Trigger: GACAGCCGCAACGGCAGCCCAAGCCTTGGGCGGGAC...AACACGGGGTGTCTGCGCATGTTTCCTCCTCCTAGCTCCATCACTGCGCACACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375793.2
ENST00000375799.8
CDS-3UTR CCA 90 bp TTAAGCCACACTCGGTGGTTCTGCCGCCCAGGGCAGGGGTGGACTGTAGGCTCCGCCCCAAGCGCTCCATaGAGGTGTCCTTCATCTCAG +
Preference number: 4 (lower is better)
Translates to: LSHTRWFCRPGQGWTVGSAPSAP*RCPSSQ
Trigger: CTGAGATGAAGGACACCTCCATGGAGCGCTTGGGGC...GGAGCCTACAGTCCACCCCTGCCCTGGGCGGCAGAACCACCGAGTGTGGCTTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp GTCAGAAGATGTCAACATGGATGCCAGGCTGGTGGGCTCCGCCCTTCTCCAAGCCCGGTCCGAAAGGACTaGTCTGGGGGCTCAGCACGG +
Preference number: 4 (lower is better)
Translates to: VRRCQHGCQAGGLRPSPSPVRKD*SGGSAR
Trigger: CCGTGCTGAGCCCCCAGACCAGTCCTTTCGGACCGG...GCTTGGAGAAGGGCGGAGCCCACCAGCCTGGCATCCATGTTGACATCTTCTGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp GGTGTTCTCGGTGCCACTCGGCAGAAATTCTGCAGACTGAGGCGGAGGCCCGGGCCTGCAGGGTCATGGTaGCCGCCACCTGATGTAACA +
Preference number: 4 (lower is better)
Translates to: GVLGATRQKFCRLRRRPGPAGSW*PPPDVT
Trigger: TGTTACATCAGGTGGCGGCCACCATGACCCTGCAGG...CCCGGGCCTCCGCCTCAGTCTGCAGAATTTCTGCCGAGTGGCACCGAGAACACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp TTAAGCCACACTCGGTGGTTCTGCCGCCCAGGGCAGGGGTGGACTGTAGGCTCCTGGTCTCGCTTGAGCTaGCAGAGAACCTCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: LSHTRWFCRPGQGWTVGSWSRLS*QRTSWV
Trigger: GACCCAGGAGGTTCTCTGCCAGCTCAAGCGAGACCA...GGAGCCTACAGTCCACCCCTGCCCTGGGCGGCAGAACCACCGAGTGTGGCTTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp AACAGCCGTGACAGTGTGCCTGCCGGCTGGCGTGCCTTCCTTTCCTGCCCACCAACTGCTTCCTGCGGTTaGTGCACACCAGCTTCACCG +
Preference number: 4 (lower is better)
Translates to: NSRDSVPAGWRAFLSCPPTASCG*CTPASP
Trigger: CGGTGAAGCTGGTGTGCACCAACCGCAGGAAGCAGT...TGGTGGGCAGGAAAGGAAGGCACGCCAGCCGGCAGGCACACTGTCACGGCTGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp TTAAGCCACACTCGGTGGTTCTGCCGCCCAGGGCAGGGGTGGACTGTAGGCTCCGTGCCAGCTTCTCCATaGTGGCATCCGTCAGGATGC +
Preference number: 4 (lower is better)
Translates to: LSHTRWFCRPGQGWTVGSVPASP*WHPSGC
Trigger: GCATCCTGACGGATGCCACCATGGAGAAGCTGGCAC...GGAGCCTACAGTCCACCCCTGCCCTGGGCGGCAGAACCACCGAGTGTGGCTTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp TGTGTGCGCAGTGATGGAGCTAGGAGGAGGAAACATGCGCAGACACCCCGTGTTCGTGGGGCCGATCCGTaGTGTTGGCTCTCCGGCAGC +
Preference number: 4 (lower is better)
Translates to: CVRSDGARRRKHAQTPRVRGADP*CWLSGS
Trigger: GCTGCCGGAGAGCCAACACCACGGATCGGCCCCACG...AACACGGGGTGTCTGCGCATGTTTCCTCCTCCTAGCTCCATCACTGCGCACACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp CCACCCCCTTTGCTCCTCGGTGCTACAGGCACTGCCGGGTTGAGGGGACAGGCACCTTTGGACACAGCCTaGCAGAGATGCTGCATCCAC +
Preference number: 4 (lower is better)
Translates to: PPPLLLGATGTAGLRGQAPLDTA*QRCCIH
Trigger: GTGGATGCAGCATCTCTGCCAGGCTGTGTCCAAAGG...TGCCTGTCCCCTCAACCCGGCAGTGCCTGTAGCACCGAGGAGCAAAGGGGGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp GTGCATCCGCAGAGCCCACAGGGCTCGGACCCTCTGCCCCCAGCGACCTCCATTGTCTGGCAATCCTCATaGCACGTAAAGAGGCGGTCA +
Preference number: 4 (lower is better)
Translates to: VHPQSPQGSDPLPPATSIVWQSS*HVKRRS
Trigger: TGACCGCCTCTTTACGTGCCATGAGGATTGCCAGAC...AATGGAGGTCGCTGGGGGCAGAGGGTCCGAGCCCTGTGGGCTCTGCGGATGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp GGTGTTCTCGGTGCCACTCGGCAGAAATTCTGCAGACTGAGGCGGAGGCCCGGGAGCTGCTGGCTGTCCTaGGAGAACTCCAAGACGCAG +
Preference number: 4 (lower is better)
Translates to: GVLGATRQKFCRLRRRPGSCWLS*ENSKTQ
Trigger: CTGCGTCTTGGAGTTCTCCCAGGACAGCCAGCAGCT...CCCGGGCCTCCGCCTCAGTCTGCAGAATTTCTGCCGAGTGGCACCGAGAACACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp GATGGAGCTAGGAGGAGGAAACATGCGCAGACACCCCGTGTTCCCGCTTCCCCAAGTGTGCCTGCCGGCTaGCGTGCCTTCCTTTCCTGC +
Preference number: 4 (lower is better)
Translates to: DGARRRKHAQTPRVPASPSVPAG*RAFLSC
Trigger: GCAGGAAAGGAAGGCACGCCAGCCGGCAGGCACACT...TGGGGAAGCGGGAACACGGGGTGTCTGCGCATGTTTCCTCCTCCTAGCTCCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp TTAAGCCACACTCGGTGGTTCTGCCGCCCAGGGCAGGGGTGGACTGTAGGCTCCCCTGATCTGGATCCCTaGAGTGGAGGGACCCTGTCT +
Preference number: 4 (lower is better)
Translates to: LSHTRWFCRPGQGWTVGSPDLDP*SGGTLS
Trigger: AGACAGGGTCCCTCCACTCCAGGGATCCAGATCAGG...GGAGCCTACAGTCCACCCCTGCCCTGGGCGGCAGAACCACCGAGTGTGGCTTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR TCA 90 bp CCGCCCTCCTGGTTCTTTTGTTCGTCCTTAGATGGATGGTGTTCTCGGTGCCACCCGAGAGCAGAGGGATaGCGTCGGTGCGGTCCGGGT +
Preference number: 4 (lower is better)
Translates to: PPSWFFCSSLDGWCSRCHPRAEG*RRCGPG
Trigger: ACCCGGACCGCACCGACGTCATCCCTCTGCTCTCGG...GTGGCACCGAGAACACCATCCATCTAAGGACGAACAAAAGAACCAGGAGGGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR TCA 90 bp TCTGGCGAGGCAGGCAGCTGTGTGCGCAGTGATGGAGCTAGGAGGAGGAAACATAGAGGCGGTCATCCGTaGGGACCAGGCAGCAGGGTA +
Preference number: 4 (lower is better)
Translates to: SGEAGSCVRSDGARRRKHRGGHP*GPGSRV
Trigger: TACCCTGCTGCCTGGTCCTCACGGATGACCGCCTCT...ATGTTTCCTCCTCCTAGCTCCATCACTGCGCACACAGCTGCCTGCCTCGCCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp CTTCCCCAGGAGGCTCTTGACGAAACTCTAGGGAAGGGCCTGGCTCCAGCCAAGAGGTTGGTGGCCACGTaGTGCAGCACCTCGATCTGC +
Preference number: 4 (lower is better)
Translates to: LPQEALDETLGKGLAPAKRLVAT*CSTSIC
Trigger: GCAGATCGAGGTGCTGCAGCACGTGGCCACCAACCT...CTTGGCTGGAGCCAGGCCCTTCCCTAGAGTTTCGTCAAGAGCCTCCTGGGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp CCTGGCTCCAGCCAAGCAGGGGACAGTCAGAAGATGTCAACATGGATGCCAGGCTCCTGGTGGAGGCCTTaGTGCTGGTCAGGTCGGAGG +
Preference number: 4 (lower is better)
Translates to: PGSSQAGDSQKMSTWMPGSWWRP*CWSGRR
Trigger: CCTCCGACCTGACCAGCAGCAAGGCCTCCACCAGGA...GCCTGGCATCCATGTTGACATCTTCTGACTGTCCCCTGCTTGGCTGGAGCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp GTCAGAAGATGTCAACATGGATGCCAGGCTGGTGGGCTCCGCCCTTCTCCAAGCTCCTGGTGGAGGCCTTaGTGCTGGTCAGGTCGGAGG +
Preference number: 4 (lower is better)
Translates to: VRRCQHGCQAGGLRPSPSSWWRP*CWSGRR
Trigger: CCTCCGACCTGACCAGCAGCAAGGCCTCCACCAGGA...GCTTGGAGAAGGGCGGAGCCCACCAGCCTGGCATCCATGTTGACATCTTCTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp GCAGGCAGCTGTGTGCGCAGTGATGGAGCTAGGAGGAGGAAACATGCGCAGACAACCTTGCTCAGGGGCTaGCCCAAGCGCTCCATGGAG +
Preference number: 4 (lower is better)
Translates to: AGSCVRSDGARRRKHAQTTLLRG*PKRSME
Trigger: CTCCATGGAGCGCTTGGGGCAGCCCCTGAGCAAGGT...TGTCTGCGCATGTTTCCTCCTCCTAGCTCCATCACTGCGCACACAGCTGCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp CCGCCCTCCTGGTTCTTTTGTTCGTCCTTAGATGGATGGTGTTCTCGGTGCCACCACGGGAGCACCAGGTaGTGGGGTCCAGCTGCCCGT +
Preference number: 4 (lower is better)
Translates to: PPSWFFCSSLDGWCSRCHHGSTR*WGPAAR
Trigger: ACGGGCAGCTGGACCCCAGCACCTGGTGCTCCCGTG...GTGGCACCGAGAACACCATCCATCTAAGGACGAACAAAAGAACCAGGAGGGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp GGTGTTCTCGGTGCCACTCGGCAGAAATTCTGCAGACTGAGGCGGAGGCCCGGGGTGTCCAGCAGAAACTaGTTCCTGCGGTTGGTGCAC +
Preference number: 4 (lower is better)
Translates to: GVLGATRQKFCRLRRRPGVSSRN*FLRLVH
Trigger: GTGCACCAACCGCAGGAAGCAGTTTCTGCTGGACAC...CCCGGGCCTCCGCCTCAGTCTGCAGAATTTCTGCCGAGTGGCACCGAGAACACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp AACAGCCGTGACAGTGTGCCTGCCGGCTGGCGTGCCTTCCTTTCCTGCCCACCAGTGTCCAGCAGAAACTaGTTCCTGCGGTTGGTGCAC +
Preference number: 4 (lower is better)
Translates to: NSRDSVPAGWRAFLSCPPVSSRN*FLRLVH
Trigger: GTGCACCAACCGCAGGAAGCAGTTTCTGCTGGACAC...TGGTGGGCAGGAAAGGAAGGCACGCCAGCCGGCAGGCACACTGTCACGGCTGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp GCCGGGCACCTGATCTGGATCCCTGGAGTGGAGGGACCCTGTCTTAAGCCACACACAGCCTGGCAGAGATaGTGCATCCACTCGGCCATC +
Preference number: 4 (lower is better)
Translates to: AGHLIWIPGVEGPCLKPHTAWQR*CIHSAI
Trigger: GATGGCCGAGTGGATGCAGCATCTCTGCCAGGCTGT...GTGTGGCTTAAGACAGGGTCCCTCCACTCCAGGGATCCAGATCAGGTGCCCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp TCCCGCTTCCCCACGTGGCCAGGAGAGTGTTCAAACACGAACAAGGATGGCTGGAGACGCAGTACTCCTTaGCCGGCTCGGTGGAGACGG +
Preference number: 4 (lower is better)
Translates to: SRFPTWPGECSNTNKDGWRRSTP*PARWRR
Trigger: CCGTCTCCACCGAGCCGGGCAAGGAGTACTGCGTCT...CCAGCCATCCTTGTTCGTGTTTGAACACTCTCCTGGCCACGTGGGGAAGCGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp AACAGCCGTGACAGTGTGCCTGCCGGCTGGCGTGCCTTCCTTTCCTGCCCACCACCACCCAGAGTTCAGTaGAGACAGCAATCGGTCCAG +
Preference number: 4 (lower is better)
Translates to: NSRDSVPAGWRAFLSCPPPPRVQ*RQQSVQ
Trigger: CTGGACCGATTGCTGTCTGCACTGAACTCTGGGTGG...TGGTGGGCAGGAAAGGAAGGCACGCCAGCCGGCAGGCACACTGTCACGGCTGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp GGTGTTCTCGGTGCCACTCGGCAGAAATTCTGCAGACTGAGGCGGAGGCCCGGGCCACCCAGAGTTCAGTaGAGACAGCAATCGGTCCAG +
Preference number: 4 (lower is better)
Translates to: GVLGATRQKFCRLRRRPGPPRVQ*RQQSVQ
Trigger: CTGGACCGATTGCTGTCTGCACTGAACTCTGGGTGG...CCCGGGCCTCCGCCTCAGTCTGCAGAATTTCTGCCGAGTGGCACCGAGAACACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp GCAGGCAGCTGTGTGCGCAGTGATGGAGCTAGGAGGAGGAAACATGCGCAGACAAGACTGTCGCTCCGCTaGCAGGCGCTGTGGATGAGG +
Preference number: 4 (lower is better)
Translates to: AGSCVRSDGARRRKHAQTRLSLR*QALWMR
Trigger: CCTCATCCACAGCGCCTGGCAGCGGAGCGACAGTCT...TGTCTGCGCATGTTTCCTCCTCCTAGCTCCATCACTGCGCACACAGCTGCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp GTCAGAAGATGTCAACATGGATGCCAGGCTGGTGGGCTCCGCCCTTCTCCAAGCAGACTGTCGCTCCGCTaGCAGGCGCTGTGGATGAGG +
Preference number: 4 (lower is better)
Translates to: VRRCQHGCQAGGLRPSPSRLSLR*QALWMR
Trigger: CCTCATCCACAGCGCCTGGCAGCGGAGCGACAGTCT...GCTTGGAGAAGGGCGGAGCCCACCAGCCTGGCATCCATGTTGACATCTTCTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp GCAGGCAGCTGTGTGCGCAGTGATGGAGCTAGGAGGAGGAAACATGCGCAGACAGCAGGACTGTGGGCATaGAGAGCCTCCTGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: AGSCVRSDGARRRKHAQTAGLWA*RASWQP
Trigger: TGGCTGCCAGGAGGCTCTGCATGCCCACAGTCCTGC...TGTCTGCGCATGTTTCCTCCTCCTAGCTCCATCACTGCGCACACAGCTGCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp CTCCAGCCAAGCAGGGGACAGTCAGAAGATGTCAACATGGATGCCAGGCTGGTGTGCGCCCCAGGTTGGTaGCCACGTGCTGCAGCACCT +
Preference number: 4 (lower is better)
Translates to: LQPSRGQSEDVNMDARLVCAPGW*PRAAAP
Trigger: AGGTGCTGCAGCACGTGGCCACCAACCTGGGGCGCA...CACCAGCCTGGCATCCATGTTGACATCTTCTGACTGTCCCCTGCTTGGCTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp CCTGGCTCCAGCCAAGCAGGGGACAGTCAGAAGATGTCAACATGGATGCCAGGCAGACTGTCTGAGCCGTaGACCGAGCTGGGAAGGCGG +
Preference number: 4 (lower is better)
Translates to: PGSSQAGDSQKMSTWMPGRLSEP*TELGRR
Trigger: CCGCCTTCCCAGCTCGGTCCACGGCTCAGACAGTCT...GCCTGGCATCCATGTTGACATCTTCTGACTGTCCCCTGCTTGGCTGGAGCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp GCAGGCAGCTGTGTGCGCAGTGATGGAGCTAGGAGGAGGAAACATGCGCAGACATGGAGGCCTTGCTGCTaGTCAGGTCGGAGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: AGSCVRSDGARRRKHAQTWRPCC*SGRRLW
Trigger: CCACAGCCTCCGACCTGACCAGCAGCAAGGCCTCCA...TGTCTGCGCATGTTTCCTCCTCCTAGCTCCATCACTGCGCACACAGCTGCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp TCCCGCTTCCCCACGTGGCCAGGAGAGTGTTCAAACACGAACAAGGATGGCTGGTGGAGGCCTTGCTGCTaGTCAGGTCGGAGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: SRFPTWPGECSNTNKDGWWRPCC*SGRRLW
Trigger: CCACAGCCTCCGACCTGACCAGCAGCAAGGCCTCCA...CCAGCCATCCTTGTTCGTGTTTGAACACTCTCCTGGCCACGTGGGGAAGCGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp TGTGTGCGCAGTGATGGAGCTAGGAGGAGGAAACATGCGCAGACACCCCGTGTTGGGTGGGGCTCCTGGTaGAGGCCTTGCTGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: CVRSDGARRRKHAQTPRVGWGSW*RPCCWS
Trigger: TGACCAGCAGCAAGGCCTCCACCAGGAGCCCCACCC...AACACGGGGTGTCTGCGCATGTTTCCTCCTCCTAGCTCCATCACTGCGCACACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp CAGTCAGAAGATGTCAACATGGATGCCAGGCTGGTGGGCTCCGCCCTTCTCCAAAAGGGGTTCTGGCGCTaGGTGGGGCTCCTGGTGGAG +
Preference number: 4 (lower is better)
Translates to: QSEDVNMDARLVGSALLQKGFWR*VGLLVE
Trigger: CTCCACCAGGAGCCCCACCCAGCGCCAGAACCCCTT...TTGGAGAAGGGCGGAGCCCACCAGCCTGGCATCCATGTTGACATCTTCTGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp GATGGAGCTAGGAGGAGGAAACATGCGCAGACACCCCGTGTTCCCGCTTCCCCATGGTGTGCACGGGGGTaGTGTCAGAGGAGGACACAG +
Preference number: 4 (lower is better)
Translates to: DGARRRKHAQTPRVPASPWCARG*CQRRTQ
Trigger: CTGTGTCCTCCTCTGACACCACCCCCGTGCACACCA...TGGGGAAGCGGGAACACGGGGTGTCTGCGCATGTTTCCTCCTCCTAGCTCCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp CTTCCCCAGGAGGCTCTTGACGAAACTCTAGGGAAGGGCCTGGCTCCAGCCAAGTGGTGTGCACGGGGGTaGTGTCAGAGGAGGACACAG +
Preference number: 4 (lower is better)
Translates to: LPQEALDETLGKGLAPAKWCARG*CQRRTQ
Trigger: CTGTGTCCTCCTCTGACACCACCCCCGTGCACACCA...CTTGGCTGGAGCCAGGCCCTTCCCTAGAGTTTCGTCAAGAGCCTCCTGGGGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp TCTGGCGAGGCAGGCAGCTGTGTGCGCAGTGATGGAGCTAGGAGGAGGAAACATTGGCTGCAGGCGGGGTaGAGTGGACTTGCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: SGEAGSCVRSDGARRRKHWLQAG*SGLASS
Trigger: TGAGGAGGCAAGTCCACTCCACCCCGCCTGCAGCCA...ATGTTTCCTCCTCCTAGCTCCATCACTGCGCACACAGCTGCCTGCCTCGCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375793.2
ENST00000375799.8
CDS-3UTR CCA 90 bp GTTCTCGGTGCCACTCGGCAGAAATTCTGCAGACTGAGGCGGAGGCCCGGGAGGAGCTGCCCGTTGAGCTaGTCGATAACCTTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: VLGATRQKFCRLRRRPGRSCPLS*SITLLR
Trigger: CCTGAGCAAGGTTATCGACCAGCTCAACGGGCAGCT...CCTCCCGGGCCTCCGCCTCAGTCTGCAGAATTTCTGCCGAGTGGCACCGAGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp TGTGTGCGCAGTGATGGAGCTAGGAGGAGGAAACATGCGCAGACACCCCGTGTTCCGGTCCGAAAGGACTaGTCTGGGGGCTCAGCACGG +
Preference number: 4 (lower is better)
Translates to: CVRSDGARRRKHAQTPRVPVRKD*SGGSAR
Trigger: CCGTGCTGAGCCCCCAGACCAGTCCTTTCGGACCGG...AACACGGGGTGTCTGCGCATGTTTCCTCCTCCTAGCTCCATCACTGCGCACACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp GCAGTGATGGAGCTAGGAGGAGGAAACATGCGCAGACACCCCGTGTTCCCGCTTAGACACGGGCTGGGCTaGTCTCGCTTGAGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: AVMELGGGNMRRHPVFPLRHGLG*SRLSWQ
Trigger: CTGCCAGCTCAAGCGAGACCAGCCCAGCCCGTGTCT...AAGCGGGAACACGGGGTGTCTGCGCATGTTTCCTCCTCCTAGCTCCATCACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp GTGCATCCGCAGAGCCCACAGGGCTCGGACCCTCTGCCCCCAGCGACCTCCATTTTTTCTCGGAACACGTaGATCATGAGCAGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: VHPQSPQGSDPLPPATSIFSRNT*IMSRSR
Trigger: CCTGCTCCTGCTCATGATCCACGTGTTCCGAGAAAA...AATGGAGGTCGCTGGGGGCAGAGGGTCCGAGCCCTGTGGGCTCTGCGGATGCAC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp GCCGGGCACCTGATCTGGATCCCTGGAGTGGAGGGACCCTGTCTTAAGCCACACCATCCGTCAGGATGCTaGGGTAGGGAGGTTCTCGAC +
Preference number: 4 (lower is better)
Translates to: AGHLIWIPGVEGPCLKPHHPSGC*GREVLD
Trigger: GTCGAGAACCTCCCTACCCCAGCATCCTGACGGATG...GTGTGGCTTAAGACAGGGTCCCTCCACTCCAGGGATCCAGATCAGGTGCCCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp GCCGGGCACCTGATCTGGATCCCTGGAGTGGAGGGACCCTGTCTTAAGCCACACCCAGCTTCTCCATGGTaGCATCCGTCAGGATGCTGG +
Preference number: 4 (lower is better)
Translates to: AGHLIWIPGVEGPCLKPHPASPW*HPSGCW
Trigger: CCAGCATCCTGACGGATGCCACCATGGAGAAGCTGG...GTGTGGCTTAAGACAGGGTCCCTCCACTCCAGGGATCCAGATCAGGTGCCCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp CTTCCCCAGGAGGCTCTTGACGAAACTCTAGGGAAGGGCCTGGCTCCAGCCAAGCCAGGGACTCGTCTGTaGGGTCCTCCCAGTGCACAA +
Preference number: 4 (lower is better)
Translates to: LPQEALDETLGKGLAPAKPGTRL*GPPSAQ
Trigger: TTGTGCACTGGGAGGACCCCACAGACGAGTCCCTGG...CTTGGCTGGAGCCAGGCCCTTCCCTAGAGTTTCGTCAAGAGCCTCCTGGGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp CTTCCCCAGGAGGCTCTTGACGAAACTCTAGGGAAGGGCCTGGCTCCAGCCAAGTCGGAGAGAATGACCTaGAAGGCGTGGGGCCGATCC +
Preference number: 4 (lower is better)
Translates to: LPQEALDETLGKGLAPAKSERMT*KAWGRS
Trigger: GGATCGGCCCCACGCCTTCCAGGTCATTCTCTCCGA...CTTGGCTGGAGCCAGGCCCTTCCCTAGAGTTTCGTCAAGAGCCTCCTGGGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp GCCCACAGGGCTCGGACCCTCTGCCCCCAGCGACCTCCATTCGCTACCTGTCGGGGTCCACCTGATAGATaGTTTTCCACCCAGAGTTCA +
Preference number: 4 (lower is better)
Translates to: AHRARTLCPQRPPFATCRGPPDR*FSTQSS
Trigger: TGAACTCTGGGTGGAAAACCATCTATCAGGTGGACC...CCGACAGGTAGCGAATGGAGGTCGCTGGGGGCAGAGGGTCCGAGCCCTGTGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp TCCCGCTTCCCCACGTGGCCAGGAGAGTGTTCAAACACGAACAAGGATGGCTGGCGCTGCCAGGCGCTGTaGATGAGGCTCAAGGCATCC +
Preference number: 4 (lower is better)
Translates to: SRFPTWPGECSNTNKDGWRCQAL*MRLKAS
Trigger: GGATGCCTTGAGCCTCATCCACAGCGCCTGGCAGCG...CCAGCCATCCTTGTTCGTGTTTGAACACTCTCCTGGCCACGTGGGGAAGCGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp GCAGTGATGGAGCTAGGAGGAGGAAACATGCGCAGACACCCCGTGTTCCCGCTTCGCTGCCAGGCGCTGTaGATGAGGCTCAAGGCATCC +
Preference number: 4 (lower is better)
Translates to: AVMELGGGNMRRHPVFPLRCQAL*MRLKAS
Trigger: GGATGCCTTGAGCCTCATCCACAGCGCCTGGCAGCG...AAGCGGGAACACGGGGTGTCTGCGCATGTTTCCTCCTCCTAGCTCCATCACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp CAGGCAGCTGTGTGCGCAGTGATGGAGCTAGGAGGAGGAAACATGCGCAGACACAGTGTGCCTGCCGGCTaGCGTGCCTTCCTTTCCTGC +
Preference number: 4 (lower is better)
Translates to: QAAVCAVMELGGGNMRRHSVPAG*RAFLSC
Trigger: GCAGGAAAGGAAGGCACGCCAGCCGGCAGGCACACT...GTGTCTGCGCATGTTTCCTCCTCCTAGCTCCATCACTGCGCACACAGCTGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp TCCCGCTTCCCCACGTGGCCAGGAGAGTGTTCAAACACGAACAAGGATGGCTGGTGGATGCCAGGCTGGTaGGCTCCGCCCTTCTCCAAG +
Preference number: 4 (lower is better)
Translates to: SRFPTWPGECSNTNKDGWWMPGW*APPFSK
Trigger: CTTGGAGAAGGGCGGAGCCCACCAGCCTGGCATCCA...CCAGCCATCCTTGTTCGTGTTTGAACACTCTCCTGGCCACGTGGGGAAGCGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp CCACCCCCTTTGCTCCTCGGTGCTACAGGCACTGCCGGGTTGAGGGGACAGGCACAGAAGATGTCAACATaGATGCCAGGCTGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: PPPLLLGATGTAGLRGQAQKMST*MPGWWA
Trigger: AGCCCACCAGCCTGGCATCCATGTTGACATCTTCTG...TGCCTGTCCCCTCAACCCGGCAGTGCCTGTAGCACCGAGGAGCAAAGGGGGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp GCCGGGCACCTGATCTGGATCCCTGGAGTGGAGGGACCCTGTCTTAAGCCACACCTTCCCAGTCTGTGCTaGGTACAGACGGCACTGCTG +
Preference number: 4 (lower is better)
Translates to: AGHLIWIPGVEGPCLKPHLPSLC*VQTALL
Trigger: CAGCAGTGCCGTCTGTACCCAGCACAGACTGGGAAG...GTGTGGCTTAAGACAGGGTCCCTCCACTCCAGGGATCCAGATCAGGTGCCCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375799.8
ENST00000642363.1
CDS-3UTR TCA 90 bp CCTGGCTCCAGCCAAGCAGGGGACAGTCAGAAGATGTCAACATGGATGCCAGGCCCAAGGAGTTCTCGTTaGGGGCCAGGTACAGCCAGG +
Preference number: 4 (lower is better)
Translates to: PGSSQAGDSQKMSTWMPGPRSSR*GPGTAR
Trigger: CCTGGCTGTACCTGGCCCTCAACGAGAACTCCTTGG...GCCTGGCATCCATGTTGACATCTTCTGACTGTCCCCTGCTTGGCTGGAGCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR TCA 90 bp GCCGGGCACCTGATCTGGATCCCTGGAGTGGAGGGACCCTGTCTTAAGCCACACCCAGCTCGAAACGAATaGACTCTAGCCCGGACACCA +
Preference number: 4 (lower is better)
Translates to: AGHLIWIPGVEGPCLKPHPARNE*TLARTP
Trigger: TGGTGTCCGGGCTAGAGTTCATTCGTTTCGAGCTGG...GTGTGGCTTAAGACAGGGTCCCTCCACTCCAGGGATCCAGATCAGGTGCCCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR TCA 90 bp GTTCTCGGTGCCACTCGGCAGAAATTCTGCAGACTGAGGCGGAGGCCCGGGAGGGAAGTCCATTGGGGCTaGAAGCCCCTCACTAAAGTC +
Preference number: 4 (lower is better)
Translates to: VLGATRQKFCRLRRRPGREVHWG*KPLTKV
Trigger: GACTTTAGTGAGGGGCTTTCAGCCCCAATGGACTTC...CCTCCCGGGCCTCCGCCTCAGTCTGCAGAATTTCTGCCGAGTGGCACCGAGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR TCA 90 bp GTGCATCCGCAGAGCCCACAGGGCTCGGACCCTCTGCCCCCAGCGACCTCCATTATGAGCAGGAGCAGGTaGTTGTTGTCTACTCTGAAC +
Preference number: 4 (lower is better)
Translates to: VHPQSPQGSDPLPPATSIMSRSR*LLSTLN
Trigger: GTTCAGAGTAGACAACAATCACCTGCTCCTGCTCAT...AATGGAGGTCGCTGGGGGCAGAGGGTCCGAGCCCTGTGGGCTCTGCGGATGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR TCA 90 bp GGTGTTCTCGGTGCCACTCGGCAGAAATTCTGCAGACTGAGGCGGAGGCCCGGGAGACATAGCAGTCTGTaGGCAGCACGTACAGCAGCT +
Preference number: 4 (lower is better)
Translates to: GVLGATRQKFCRLRRRPGRHSSL*AARTAA
Trigger: AGCTGCTGTACGTGCTGCTCACAGACTGCTATGTCT...CCCGGGCCTCCGCCTCAGTCTGCAGAATTTCTGCCGAGTGGCACCGAGAACACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR TCA 90 bp GATGGAGCTAGGAGGAGGAAACATGCGCAGACACCCCGTGTTCCCGCTTCCCCACGTAGAAGCGCACGGTaGCAGCAGATGCCTCACACT +
Preference number: 4 (lower is better)
Translates to: DGARRRKHAQTPRVPASPRRSAR*QQMPHT
Trigger: AGTGTGAGGCATCTGCTGTCACCGTGCGCTTCTACG...TGGGGAAGCGGGAACACGGGGTGTCTGCGCATGTTTCCTCCTCCTAGCTCCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR TCA 90 bp GTCAGAAGATGTCAACATGGATGCCAGGCTGGTGGGCTCCGCCCTTCTCCAAGCAGAAATTCTGCAGACTaGGGCGGAGGCCCGGGAGGA +
Preference number: 4 (lower is better)
Translates to: VRRCQHGCQAGGLRPSPSRNSAD*GGGPGG
Trigger: TCCTCCCGGGCCTCCGCCTCAGTCTGCAGAATTTCT...GCTTGGAGAAGGGCGGAGCCCACCAGCCTGGCATCCATGTTGACATCTTCTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp CCTGGCTCCAGCCAAGCAGGGGACAGTCAGAAGATGTCAACATGGATGCCAGGCAGGGCGTGGTCCAGGTaGTCACACAGACGCTGTAGG +
Preference number: 4 (lower is better)
Translates to: PGSSQAGDSQKMSTWMPGRAWSR*SHRRCR
Trigger: CCTACAGCGTCTGTGTGAGCACCTGGACCACGCCCT...GCCTGGCATCCATGTTGACATCTTCTGACTGTCCCCTGCTTGGCTGGAGCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp GCCGGGCACCTGATCTGGATCCCTGGAGTGGAGGGACCCTGTCTTAAGCCACACTGCAGCACCTCGATCTaGTTGATGGCCTCTCTCCGA +
Preference number: 4 (lower is better)
Translates to: AGHLIWIPGVEGPCLKPHCSTSI*LMASLR
Trigger: TCGGAGAGAGGCCATCAAGCAGATCGAGGTGCTGCA...GTGTGGCTTAAGACAGGGTCCCTCCACTCCAGGGATCCAGATCAGGTGCCCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp GATGGAGCTAGGAGGAGGAAACATGCGCAGACACCCCGTGTTCCCGCTTCCCCATTGGTGGCCACGTGCTaGAGCACCTCGATCTGCTTG +
Preference number: 4 (lower is better)
Translates to: DGARRRKHAQTPRVPASPLVATC*STSICL
Trigger: CAAGCAGATCGAGGTGCTGCAGCACGTGGCCACCAA...TGGGGAAGCGGGAACACGGGGTGTCTGCGCATGTTTCCTCCTCCTAGCTCCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp TCTGGCGAGGCAGGCAGCTGTGTGCGCAGTGATGGAGCTAGGAGGAGGAAACATGTGCTGGGGTCCAGCTaGCCGTTGAGCTGGTCGATA +
Preference number: 4 (lower is better)
Translates to: SGEAGSCVRSDGARRRKHVLGSS*PLSWSI
Trigger: TATCGACCAGCTCAACGGGCAGCTGGACCCCAGCAC...ATGTTTCCTCCTCCTAGCTCCATCACTGCGCACACAGCTGCCTGCCTCGCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp GCAGGCAGCTGTGTGCGCAGTGATGGAGCTAGGAGGAGGAAACATGCGCAGACAGTGCTGGGGTCCAGCTaGCCGTTGAGCTGGTCGATA +
Preference number: 4 (lower is better)
Translates to: AGSCVRSDGARRRKHAQTVLGSS*PLSWSI
Trigger: TATCGACCAGCTCAACGGGCAGCTGGACCCCAGCAC...TGTCTGCGCATGTTTCCTCCTCCTAGCTCCATCACTGCGCACACAGCTGCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp GATGGAGCTAGGAGGAGGAAACATGCGCAGACACCCCGTGTTCCCGCTTCCCCAACCAGCTTCACCGTCTaGTGGTCAAGGCCAACCGAC +
Preference number: 4 (lower is better)
Translates to: DGARRRKHAQTPRVPASPTSFTV*WSRPTD
Trigger: GTCGGTTGGCCTTGACCAGCAGACGGTGAAGCTGGT...TGGGGAAGCGGGAACACGGGGTGTCTGCGCATGTTTCCTCCTCCTAGCTCCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp GCAGGCAGCTGTGTGCGCAGTGATGGAGCTAGGAGGAGGAAACATGCGCAGACATGCCCAGGTAGGAGGTaGCCGCCTTGTAGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: AGSCVRSDGARRRKHAQTCPGRR*PPCSAA
Trigger: TGCTGCACTACAAGGCGGGCACCTCCTACCTGGGCA...TGTCTGCGCATGTTTCCTCCTCCTAGCTCCATCACTGCGCACACAGCTGCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp GTCAGAAGATGTCAACATGGATGCCAGGCTGGTGGGCTCCGCCCTTCTCCAAGCTGCCCAGGTAGGAGGTaGCCGCCTTGTAGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: VRRCQHGCQAGGLRPSPSCPGRR*PPCSAA
Trigger: TGCTGCACTACAAGGCGGGCACCTCCTACCTGGGCA...GCTTGGAGAAGGGCGGAGCCCACCAGCCTGGCATCCATGTTGACATCTTCTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp CTCCAGCCAAGCAGGGGACAGTCAGAAGATGTCAACATGGATGCCAGGCTGGTGCGTGCCTTCCTTTCCTaGCCACCAGGGACGCCAACC +
Preference number: 4 (lower is better)
Translates to: LQPSRGQSEDVNMDARLVRAFLS*PPGTPT
Trigger: GGTTGGCGTCCCTGGTGGGCAGGAAAGGAAGGCACG...CACCAGCCTGGCATCCATGTTGACATCTTCTGACTGTCCCCTGCTTGGCTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp CTCCAGCCAAGCAGGGGACAGTCAGAAGATGTCAACATGGATGCCAGGCTGGTGCAGGATGCCCAGGGGTaGCGGGCACCTGATCTGGAT +
Preference number: 4 (lower is better)
Translates to: LQPSRGQSEDVNMDARLVQDAQG*RAPDLD
Trigger: ATCCAGATCAGGTGCCCGGCACCCCTGGGCATCCTG...CACCAGCCTGGCATCCATGTTGACATCTTCTGACTGTCCCCTGCTTGGCTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp CCGCCCTCCTGGTTCTTTTGTTCGTCCTTAGATGGATGGTGTTCTCGGTGCCACCGGTGCTACAGGCACTaGCGGGTTGAGGGGACAGGC +
Preference number: 4 (lower is better)
Translates to: PPSWFFCSSLDGWCSRCHRCYRH*RVEGTG
Trigger: GCCTGTCCCCTCAACCCGGCAGTGCCTGTAGCACCG...GTGGCACCGAGAACACCATCCATCTAAGGACGAACAAAAGAACCAGGAGGGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp TCCCGCTTCCCCACGTGGCCAGGAGAGTGTTCAAACACGAACAAGGATGGCTGGCCCTTTGCTCCTCGGTaGTACAGGCACTGCCGGGTT +
Preference number: 4 (lower is better)
Translates to: SRFPTWPGECSNTNKDGWPFAPR*YRHCRV
Trigger: AACCCGGCAGTGCCTGTAGCACCGAGGAGCAAAGGG...CCAGCCATCCTTGTTCGTGTTTGAACACTCTCCTGGCCACGTGGGGAAGCGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp TCTGGCGAGGCAGGCAGCTGTGTGCGCAGTGATGGAGCTAGGAGGAGGAAACATCCCATCCACCCCCTTTaGTCCTCGGTGCTACAGGCA +
Preference number: 4 (lower is better)
Translates to: SGEAGSCVRSDGARRRKHPIHPL*SSVLQA
Trigger: TGCCTGTAGCACCGAGGAGCAAAGGGGGTGGATGGG...ATGTTTCCTCCTCCTAGCTCCATCACTGCGCACACAGCTGCCTGCCTCGCCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp AACAGCCGTGACAGTGTGCCTGCCGGCTGGCGTGCCTTCCTTTCCTGCCCACCATGTCATGGTTCCGGATaGCAGGGATCTCATCCTCAC +
Preference number: 4 (lower is better)
Translates to: NSRDSVPAGWRAFLSCPPCHGSG*QGSHPH
Trigger: GTGAGGATGAGATCCCTGCCATCCGGAACCATGACA...TGGTGGGCAGGAAAGGAAGGCACGCCAGCCGGCAGGCACACTGTCACGGCTGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp CAGGCAGCTGTGTGCGCAGTGATGGAGCTAGGAGGAGGAAACATGCGCAGACACCCGTACAGCAGGGCGTaGTCCAGGTGCTCACACAGA +
Preference number: 4 (lower is better)
Translates to: QAAVCAVMELGGGNMRRHPYSRA*SRCSHR
Trigger: TCTGTGTGAGCACCTGGACCACGCCCTGCTGTACGG...GTGTCTGCGCATGTTTCCTCCTCCTAGCTCCATCACTGCGCACACAGCTGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp CTCCTGGTTCTTTTGTTCGTCCTTAGATGGATGGTGTTCTCGGTGCCACTCGGCGGCTGCGCCCCAGGTTaGTGGCCACGTGCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: LLVLLFVLRWMVFSVPLGGCAPG*WPRAAA
Trigger: TGCTGCAGCACGTGGCCACCAACCTGGGGCGCAGCC...GCCGAGTGGCACCGAGAACACCATCCATCTAAGGACGAACAAAAGAACCAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp GATGGAGCTAGGAGGAGGAAACATGCGCAGACACCCCGTGTTCCCGCTTCCCCAAGCCGTGGACCGAGCTaGGAAGGCGGTCTTCAAAGT +
Preference number: 4 (lower is better)
Translates to: DGARRRKHAQTPRVPASPSRGPS*EGGLQS
Trigger: ACTTTGAAGACCGCCTTCCCAGCTCGGTCCACGGCT...TGGGGAAGCGGGAACACGGGGTGTCTGCGCATGTTTCCTCCTCCTAGCTCCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp CCGCCCTCCTGGTTCTTTTGTTCGTCCTTAGATGGATGGTGTTCTCGGTGCCACAAGGGGTTCTGGCGCTaGGTGGGGCTCCTGGTGGAG +
Preference number: 4 (lower is better)
Translates to: PPSWFFCSSLDGWCSRCHKGFWR*VGLLVE
Trigger: CTCCACCAGGAGCCCCACCCAGCGCCAGAACCCCTT...GTGGCACCGAGAACACCATCCATCTAAGGACGAACAAAAGAACCAGGAGGGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp CCTGGCTCCAGCCAAGCAGGGGACAGTCAGAAGATGTCAACATGGATGCCAGGCCCTTCTCCTGAGAGGTaGTGTGCACGGGGGTGGTGT +
Preference number: 4 (lower is better)
Translates to: PGSSQAGDSQKMSTWMPGPSPER*CARGWC
Trigger: ACACCACCCCCGTGCACACCACCTCTCAGGAGAAGG...GCCTGGCATCCATGTTGACATCTTCTGACTGTCCCCTGCTTGGCTGGAGCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp TCTGGCGAGGCAGGCAGCTGTGTGCGCAGTGATGGAGCTAGGAGGAGGAAACATGGCAAGCATAGTGTCTaGCGAGTCCCGCCCAAGGCT +
Preference number: 4 (lower is better)
Translates to: SGEAGSCVRSDGARRRKHGKHSV*RVPPKA
Trigger: AGCCTTGGGCGGGACTCGCCAGACACTATGCTTGCC...ATGTTTCCTCCTCCTAGCTCCATCACTGCGCACACAGCTGCCTGCCTCGCCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375793.2
ENST00000375799.8
CDS-3UTR CCA 90 bp GCAGTGATGGAGCTAGGAGGAGGAAACATGCGCAGACACCCCGTGTTCCCGCTTGGCAAGCATAGTGTCTaGCGAGTCCCGCCCAAGGCT +
Preference number: 4 (lower is better)
Translates to: AVMELGGGNMRRHPVFPLGKHSV*RVPPKA
Trigger: AGCCTTGGGCGGGACTCGCCAGACACTATGCTTGCC...AAGCGGGAACACGGGGTGTCTGCGCATGTTTCCTCCTCCTAGCTCCATCACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375793.2
ENST00000375799.8
CDS-3UTR CCA 90 bp CTCCAGCCAAGCAGGGGACAGTCAGAAGATGTCAACATGGATGCCAGGCTGGTGCCCTCTCCCTCCTCCTaGGGGGAGGCAAGCATAGTG +
Preference number: 4 (lower is better)
Translates to: LQPSRGQSEDVNMDARLVPSPSS*GEASIV
Trigger: CACTATGCTTGCCTCCCCCCAGGAGGAGGGAGAGGG...CACCAGCCTGGCATCCATGTTGACATCTTCTGACTGTCCCCTGCTTGGCTGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375793.2
ENST00000375799.8
CDS-3UTR CCA 90 bp GCAGTGATGGAGCTAGGAGGAGGAAACATGCGCAGACACCCCGTGTTCCCGCTTAGCCCTGCAGGGTCATaGTGGCCGCCACCTGATGTA +
Preference number: 4 (lower is better)
Translates to: AVMELGGGNMRRHPVFPLSPAGS*WPPPDV
Trigger: TACATCAGGTGGCGGCCACCATGACCCTGCAGGGCT...AAGCGGGAACACGGGGTGTCTGCGCATGTTTCCTCCTCCTAGCTCCATCACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp CCTGGCTCCAGCCAAGCAGGGGACAGTCAGAAGATGTCAACATGGATGCCAGGCGGAACATGCAGCGGTTaGCCAAGCCCTGCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: PGSSQAGDSQKMSTWMPGGTCSG*PSPAGS
Trigger: TGACCCTGCAGGGCTTGGCCAACCGCTGCATGTTCC...GCCTGGCATCCATGTTGACATCTTCTGACTGTCCCCTGCTTGGCTGGAGCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp CTCCAGCCAAGCAGGGGACAGTCAGAAGATGTCAACATGGATGCCAGGCTGGTGAGACACGGGCTGGGCTaGTCTCGCTTGAGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: LQPSRGQSEDVNMDARLVRHGLG*SRLSWQ
Trigger: CTGCCAGCTCAAGCGAGACCAGCCCAGCCCGTGTCT...CACCAGCCTGGCATCCATGTTGACATCTTCTGACTGTCCCCTGCTTGGCTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp CTCGGTGCCACTCGGCAGAAATTCTGCAGACTGAGGCGGAGGCCCGGGAGGAGGTTTTCTCGGAACACGTaGATCATGAGCAGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: LGATRQKFCRLRRRPGRRFSRNT*IMSRSR
Trigger: CCTGCTCCTGCTCATGATCCACGTGTTCCGAGAAAA...CCTCCTCCCGGGCCTCCGCCTCAGTCTGCAGAATTTCTGCCGAGTGGCACCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp GATGGAGCTAGGAGGAGGAAACATGCGCAGACACCCCGTGTTCCCGCTTCCCCAGGTATGGCTTCTCTGTaGCCCCTTTCCGGAGCAGGT +
Preference number: 4 (lower is better)
Translates to: DGARRRKHAQTPRVPASPGMASL*PLSGAG
Trigger: ACCTGCTCCGGAAAGGGGCCACAGAGAAGCCATACC...TGGGGAAGCGGGAACACGGGGTGTCTGCGCATGTTTCCTCCTCCTAGCTCCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp CTTCCCCAGGAGGCTCTTGACGAAACTCTAGGGAAGGGCCTGGCTCCAGCCAAGGTGCCAGCTTCTCCATaGTGGCATCCGTCAGGATGC +
Preference number: 4 (lower is better)
Translates to: LPQEALDETLGKGLAPAKVPASP*WHPSGC
Trigger: GCATCCTGACGGATGCCACCATGGAGAAGCTGGCAC...CTTGGCTGGAGCCAGGCCCTTCCCTAGAGTTTCGTCAAGAGCCTCCTGGGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp AACAGCCGTGACAGTGTGCCTGCCGGCTGGCGTGCCTTCCTTTCCTGCCCACCACTTGGGCCACAAATTTaGCCAGTGCCAGCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: NSRDSVPAGWRAFLSCPPLGPQI*PVPASP
Trigger: TGGAGAAGCTGGCACTGGCCAAATTTGTGGCCCAAG...TGGTGGGCAGGAAAGGAAGGCACGCCAGCCGGCAGGCACACTGTCACGGCTGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp GCAGGCAGCTGTGTGCGCAGTGATGGAGCTAGGAGGAGGAAACATGCGCAGACAATGACCTGGAAGGCGTaGGGCCGATCCGTGGTGTTG +
Preference number: 4 (lower is better)
Translates to: AGSCVRSDGARRRKHAQTMTWKA*GRSVVL
Trigger: CAACACCACGGATCGGCCCCACGCCTTCCAGGTCAT...TGTCTGCGCATGTTTCCTCCTCCTAGCTCCATCACTGCGCACACAGCTGCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp TCCCGCTTCCCCACGTGGCCAGGAGAGTGTTCAAACACGAACAAGGATGGCTGGATGACCTGGAAGGCGTaGGGCCGATCCGTGGTGTTG +
Preference number: 4 (lower is better)
Translates to: SRFPTWPGECSNTNKDGWMTWKA*GRSVVL
Trigger: CAACACCACGGATCGGCCCCACGCCTTCCAGGTCAT...CCAGCCATCCTTGTTCGTGTTTGAACACTCTCCTGGCCACGTGGGGAAGCGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp CAGTCAGAAGATGTCAACATGGATGCCAGGCTGGTGGGCTCCGCCCTTCTCCAACTGGGAGCTACGCCCTaGGGGATGACCCCTTTGGAC +
Preference number: 4 (lower is better)
Translates to: QSEDVNMDARLVGSALLQLGATP*GMTPLD
Trigger: GTCCAAAGGGGTCATCCCCCAGGGCGTAGCTCCCAG...TTGGAGAAGGGCGGAGCCCACCAGCCTGGCATCCATGTTGACATCTTCTGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp TTAAGCCACACTCGGTGGTTCTGCCGCCCAGGGCAGGGGTGGACTGTAGGCTCCCGGAAGAAGCTGGTCTaGCAATCCTCATGGCACGTA +
Preference number: 4 (lower is better)
Translates to: LSHTRWFCRPGQGWTVGSRKKLV*QSSWHV
Trigger: TACGTGCCATGAGGATTGCCAGACCAGCTTCTTCCG...GGAGCCTACAGTCCACCCCTGCCCTGGGCGGCAGAACCACCGAGTGTGGCTTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp CCTGGCTCCAGCCAAGCAGGGGACAGTCAGAAGATGTCAACATGGATGCCAGGCTTGTTGGAGGCTTCCTaGATCGCCGTGTGGGGGAGG +
Preference number: 4 (lower is better)
Translates to: PGSSQAGDSQKMSTWMPGLLEAS*IAVWGR
Trigger: CCTCCCCCACACGGCGATCCAGGAAGCCTCCAACAA...GCCTGGCATCCATGTTGACATCTTCTGACTGTCCCCTGCTTGGCTGGAGCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp CTCCAGCCAAGCAGGGGACAGTCAGAAGATGTCAACATGGATGCCAGGCTGGTGAGTGTGCCTGCCGGCTaGCGTGCCTTCCTTTCCTGC +
Preference number: 4 (lower is better)
Translates to: LQPSRGQSEDVNMDARLVSVPAG*RAFLSC
Trigger: GCAGGAAAGGAAGGCACGCCAGCCGGCAGGCACACT...CACCAGCCTGGCATCCATGTTGACATCTTCTGACTGTCCCCTGCTTGGCTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp TGTGTGCGCAGTGATGGAGCTAGGAGGAGGAAACATGCGCAGACACCCCGTGTTGCCGGGCACCTGATCTaGATCCCTGGAGTGGAGGGA +
Preference number: 4 (lower is better)
Translates to: CVRSDGARRRKHAQTPRVAGHLI*IPGVEG
Trigger: TCCCTCCACTCCAGGGATCCAGATCAGGTGCCCGGC...AACACGGGGTGTCTGCGCATGTTTCCTCCTCCTAGCTCCATCACTGCGCACACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp GTTCTCGGTGCCACTCGGCAGAAATTCTGCAGACTGAGGCGGAGGCCCGGGAGGTCGTCCTTAGATGGATaGTGTTCTCGGTGCCACTCG +
Preference number: 4 (lower is better)
Translates to: VLGATRQKFCRLRRRPGRSSLDG*CSRCHS
Trigger: CGAGTGGCACCGAGAACACCATCCATCTAAGGACGA...CCTCCCGGGCCTCCGCCTCAGTCTGCAGAATTTCTGCCGAGTGGCACCGAGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp GGTGTTCTCGGTGCCACTCGGCAGAAATTCTGCAGACTGAGGCGGAGGCCCGGGTCGTCCTTAGATGGATaGTGTTCTCGGTGCCACTCG +
Preference number: 4 (lower is better)
Translates to: GVLGATRQKFCRLRRRPGSSLDG*CSRCHS
Trigger: CGAGTGGCACCGAGAACACCATCCATCTAAGGACGA...CCCGGGCCTCCGCCTCAGTCTGCAGAATTTCTGCCGAGTGGCACCGAGAACACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp CAGAGCCCACAGGGCTCGGACCCTCTGCCCCCAGCGACCTCCATTCGCTACCTGTTGTTCGTCCTTAGATaGATGGTGTTCTCGGTGCCA +
Preference number: 4 (lower is better)
Translates to: QSPQGSDPLPPATSIRYLLFVLR*MVFSVP
Trigger: TGGCACCGAGAACACCATCCATCTAAGGACGAACAA...CAGGTAGCGAATGGAGGTCGCTGGGGGCAGAGGGTCCGAGCCCTGTGGGCTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp CAGTCAGAAGATGTCAACATGGATGCCAGGCTGGTGGGCTCCGCCCTTCTCCAAACGAACAAGGATGGCTaGGCACTCAGGGCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: QSEDVNMDARLVGSALLQTNKDG*ALRAPA
Trigger: GGCTGGGGCCCTGAGTGCCCAGCCATCCTTGTTCGT...TTGGAGAAGGGCGGAGCCCACCAGCCTGGCATCCATGTTGACATCTTCTGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp CTTCCCCAGGAGGCTCTTGACGAAACTCTAGGGAAGGGCCTGGCTCCAGCCAAGAAACACGAACAAGGATaGCTGGGCACTCAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: LPQEALDETLGKGLAPAKKHEQG*LGTQGP
Trigger: GGGGCCCTGAGTGCCCAGCCATCCTTGTTCGTGTTT...CTTGGCTGGAGCCAGGCCCTTCCCTAGAGTTTCGTCAAGAGCCTCCTGGGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp CTCCAGCCAAGCAGGGGACAGTCAGAAGATGTCAACATGGATGCCAGGCTGGTGTGGATGCCAGGCTGGTaGGCTCCGCCCTTCTCCAAG +
Preference number: 4 (lower is better)
Translates to: LQPSRGQSEDVNMDARLVWMPGW*APPFSK
Trigger: CTTGGAGAAGGGCGGAGCCCACCAGCCTGGCATCCA...CACCAGCCTGGCATCCATGTTGACATCTTCTGACTGTCCCCTGCTTGGCTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp CAGTCAGAAGATGTCAACATGGATGCCAGGCTGGTGGGCTCCGCCCTTCTCCAAACATGGATGCCAGGCTaGTGGGCTCCGCCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: QSEDVNMDARLVGSALLQTWMPG*WAPPFS
Trigger: GGAGAAGGGCGGAGCCCACCAGCCTGGCATCCATGT...TTGGAGAAGGGCGGAGCCCACCAGCCTGGCATCCATGTTGACATCTTCTGACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp GGTGTTCTCGGTGCCACTCGGCAGAAATTCTGCAGACTGAGGCGGAGGCCCGGGCAGAAGATGTCAACATaGATGCCAGGCTGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: GVLGATRQKFCRLRRRPGQKMST*MPGWWA
Trigger: AGCCCACCAGCCTGGCATCCATGTTGACATCTTCTG...CCCGGGCCTCCGCCTCAGTCTGCAGAATTTCTGCCGAGTGGCACCGAGAACACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR TCA 90 bp GATGGAGCTAGGAGGAGGAAACATGCGCAGACACCCCGTGTTCCCGCTTCCCCAATGGTGGCCGCCACCTaGTGTAACAGTGCTTGGACT +
Preference number: 4 (lower is better)
Translates to: DGARRRKHAQTPRVPASPMVAAT*CNSAWT
Trigger: AGTCCAAGCACTGTTACATCAGGTGGCGGCCACCAT...TGGGGAAGCGGGAACACGGGGTGTCTGCGCATGTTTCCTCCTCCTAGCTCCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR TCA 90 bp CAGTCAGAAGATGTCAACATGGATGCCAGGCTGGTGGGCTCCGCCCTTCTCCAAAGAAATTCTGCAGACTaGGGCGGAGGCCCGGGAGGA +
Preference number: 4 (lower is better)
Translates to: QSEDVNMDARLVGSALLQRNSAD*GGGPGG
Trigger: TCCTCCCGGGCCTCCGCCTCAGTCTGCAGAATTTCT...TTGGAGAAGGGCGGAGCCCACCAGCCTGGCATCCATGTTGACATCTTCTGACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR TCA 90 bp CAGGCAGCTGTGTGCGCAGTGATGGAGCTAGGAGGAGGAAACATGCGCAGACACTCCCCAGGAGGCTCTTaGCGAAACTCTAGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: QAAVCAVMELGGGNMRRHSPGGS*RNSREG
Trigger: CCCTTCCCTAGAGTTTCGTCAAGAGCCTCCTGGGGA...GTGTCTGCGCATGTTTCCTCCTCCTAGCTCCATCACTGCGCACACAGCTGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp CTTCCCCAGGAGGCTCTTGACGAAACTCTAGGGAAGGGCCTGGCTCCAGCCAAGTGCAGCACCTCGATCTaGTTGATGGCCTCTCTCCGA +
Preference number: 4 (lower is better)
Translates to: LPQEALDETLGKGLAPAKCSTSI*LMASLR
Trigger: TCGGAGAGAGGCCATCAAGCAGATCGAGGTGCTGCA...CTTGGCTGGAGCCAGGCCCTTCCCTAGAGTTTCGTCAAGAGCCTCCTGGGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp CTTCCCCAGGAGGCTCTTGACGAAACTCTAGGGAAGGGCCTGGCTCCAGCCAAGCTGTCACCGTCCCCCTaGTTGGCACATTTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: LPQEALDETLGKGLAPAKLSPSP*LAHFFW
Trigger: CCAGAAGAAATGTGCCAAGCAGGGGGACGGTGACAG...CTTGGCTGGAGCCAGGCCCTTCCCTAGAGTTTCGTCAAGAGCCTCCTGGGGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375793.2
ENST00000375799.8
CDS-3UTR GCA 90 bp CCGCCCTCCTGGTTCTTTTGTTCGTCCTTAGATGGATGGTGTTCTCGGTGCCACACCTTGCTCAGGGGCTaGCCCAAGCGCTCCATGGAG +
Preference number: 4 (lower is better)
Translates to: PPSWFFCSSLDGWCSRCHTLLRG*PKRSME
Trigger: CTCCATGGAGCGCTTGGGGCAGCCCCTGAGCAAGGT...GTGGCACCGAGAACACCATCCATCTAAGGACGAACAAAAGAACCAGGAGGGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp GCAGGCAGCTGTGTGCGCAGTGATGGAGCTAGGAGGAGGAAACATGCGCAGACAGGGCTACTAGGAACATaGAGCGGTTGGCCAAGCCCT +
Preference number: 4 (lower is better)
Translates to: AGSCVRSDGARRRKHAQTGLLGT*SGWPSP
Trigger: AGGGCTTGGCCAACCGCTGCATGTTCCTAGTAGCCC...TGTCTGCGCATGTTTCCTCCTCCTAGCTCCATCACTGCGCACACAGCTGCCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp CCGCCCTCCTGGTTCTTTTGTTCGTCCTTAGATGGATGGTGTTCTCGGTGCCACACAGCAGCTGCAGGTTaGCCTCCATGTGCCCGGTGC +
Preference number: 4 (lower is better)
Translates to: PPSWFFCSSLDGWCSRCHTAAAG*PPCARC
Trigger: GCACCGGGCACATGGAGGGCAACCTGCAGCTGCTGT...GTGGCACCGAGAACACCATCCATCTAAGGACGAACAAAAGAACCAGGAGGGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp GTCAGAAGATGTCAACATGGATGCCAGGCTGGTGGGCTCCGCCCTTCTCCAAGCAGCACGTACAGCAGCTaGAGGTTGCCCTCCATGTGC +
Preference number: 4 (lower is better)
Translates to: VRRCQHGCQAGGLRPSPSSTYSS*RLPSMC
Trigger: GCACATGGAGGGCAACCTGCAGCTGCTGTACGTGCT...GCTTGGAGAAGGGCGGAGCCCACCAGCCTGGCATCCATGTTGACATCTTCTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp CCTGGCTCCAGCCAAGCAGGGGACAGTCAGAAGATGTCAACATGGATGCCAGGCACCAGCTTCACCGTCTaGTGGTCAAGGCCAACCGAC +
Preference number: 4 (lower is better)
Translates to: PGSSQAGDSQKMSTWMPGTSFTV*WSRPTD
Trigger: GTCGGTTGGCCTTGACCAGCAGACGGTGAAGCTGGT...GCCTGGCATCCATGTTGACATCTTCTGACTGTCCCCTGCTTGGCTGGAGCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp GCAGTGATGGAGCTAGGAGGAGGAAACATGCGCAGACACCCCGTGTTCCCGCTTTGGCATCCGTCAGGATaGTGGGGTAGGGAGGTTCTC +
Preference number: 4 (lower is better)
Translates to: AVMELGGGNMRRHPVFPLWHPSG*WGREVL
Trigger: GAGAACCTCCCTACCCCAGCATCCTGACGGATGCCA...AAGCGGGAACACGGGGTGTCTGCGCATGTTTCCTCCTCCTAGCTCCATCACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp GTCAGAAGATGTCAACATGGATGCCAGGCTGGTGGGCTCCGCCCTTCTCCAAGCTCTTCCAGTGTTCCTTaGCCAGGTAGGAGGTGCCCG +
Preference number: 4 (lower is better)
Translates to: VRRCQHGCQAGGLRPSPSSSSVP*PGRRCP
Trigger: CGGGCACCTCCTACCTGGGCAAGGAACACTGGAAGA...GCTTGGAGAAGGGCGGAGCCCACCAGCCTGGCATCCATGTTGACATCTTCTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp CAGTCAGAAGATGTCAACATGGATGCCAGGCTGGTGGGCTCCGCCCTTCTCCAAGCCTGGCAGAGATGCTaGATCCACTCGGCCATCTCG +
Preference number: 4 (lower is better)
Translates to: QSEDVNMDARLVGSALLQAWQRC*IHSAIS
Trigger: CGAGATGGCCGAGTGGATGCAGCATCTCTGCCAGGC...TTGGAGAAGGGCGGAGCCCACCAGCCTGGCATCCATGTTGACATCTTCTGACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp CCGCCCTCCTGGTTCTTTTGTTCGTCCTTAGATGGATGGTGTTCTCGGTGCCACCGTGCCTTCCTTTCCTaGCCACCAGGGACGCCAACC +
Preference number: 4 (lower is better)
Translates to: PPSWFFCSSLDGWCSRCHRAFLS*PPGTPT
Trigger: GGTTGGCGTCCCTGGTGGGCAGGAAAGGAAGGCACG...GTGGCACCGAGAACACCATCCATCTAAGGACGAACAAAAGAACCAGGAGGGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp GTCAGAAGATGTCAACATGGATGCCAGGCTGGTGGGCTCCGCCCTTCTCCAAGCAGATGTCAACATGGATaGCAGGCTGGTGGGCTCCGC +
Preference number: 4 (lower is better)
Translates to: VRRCQHGCQAGGLRPSPSRCQHG*QAGGLR
Trigger: GCGGAGCCCACCAGCCTGGCATCCATGTTGACATCT...GCTTGGAGAAGGGCGGAGCCCACCAGCCTGGCATCCATGTTGACATCTTCTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp CCGCCCTCCTGGTTCTTTTGTTCGTCCTTAGATGGATGGTGTTCTCGGTGCCACAGACTGTCTGAGCCGTaGACCGAGCTGGGAAGGCGG +
Preference number: 4 (lower is better)
Translates to: PPSWFFCSSLDGWCSRCHRLSEP*TELGRR
Trigger: CCGCCTTCCCAGCTCGGTCCACGGCTCAGACAGTCT...GTGGCACCGAGAACACCATCCATCTAAGGACGAACAAAAGAACCAGGAGGGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp CTTCCCCAGGAGGCTCTTGACGAAACTCTAGGGAAGGGCCTGGCTCCAGCCAAGAGCTGCCCGTTGAGCTaGTCGATAACCTTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: LPQEALDETLGKGLAPAKSCPLS*SITLLR
Trigger: CCTGAGCAAGGTTATCGACCAGCTCAACGGGCAGCT...CTTGGCTGGAGCCAGGCCCTTCCCTAGAGTTTCGTCAAGAGCCTCCTGGGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp TCTGGCGAGGCAGGCAGCTGTGTGCGCAGTGATGGAGCTAGGAGGAGGAAACATCCTGCAGGGTCATGGTaGCCGCCACCTGATGTAACA +
Preference number: 4 (lower is better)
Translates to: SGEAGSCVRSDGARRRKHPAGSW*PPPDVT
Trigger: TGTTACATCAGGTGGCGGCCACCATGACCCTGCAGG...ATGTTTCCTCCTCCTAGCTCCATCACTGCGCACACAGCTGCCTGCCTCGCCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp CAGGCAGCTGTGTGCGCAGTGATGGAGCTAGGAGGAGGAAACATGCGCAGACACGGTATGGCTTCTCTGTaGCCCCTTTCCGGAGCAGGT +
Preference number: 4 (lower is better)
Translates to: QAAVCAVMELGGGNMRRHGMASL*PLSGAG
Trigger: ACCTGCTCCGGAAAGGGGCCACAGAGAAGCCATACC...GTGTCTGCGCATGTTTCCTCCTCCTAGCTCCATCACTGCGCACACAGCTGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp CCTGGCTCCAGCCAAGCAGGGGACAGTCAGAAGATGTCAACATGGATGCCAGGCCATCCGTCAGGATGCTaGGGTAGGGAGGTTCTCGAC +
Preference number: 4 (lower is better)
Translates to: PGSSQAGDSQKMSTWMPGHPSGC*GREVLD
Trigger: GTCGAGAACCTCCCTACCCCAGCATCCTGACGGATG...GCCTGGCATCCATGTTGACATCTTCTGACTGTCCCCTGCTTGGCTGGAGCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp TCCCGCTTCCCCACGTGGCCAGGAGAGTGTTCAAACACGAACAAGGATGGCTGGCATCCGTCAGGATGCTaGGGTAGGGAGGTTCTCGAC +
Preference number: 4 (lower is better)
Translates to: SRFPTWPGECSNTNKDGWHPSGC*GREVLD
Trigger: GTCGAGAACCTCCCTACCCCAGCATCCTGACGGATG...CCAGCCATCCTTGTTCGTGTTTGAACACTCTCCTGGCCACGTGGGGAAGCGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp CAGGCAGCTGTGTGCGCAGTGATGGAGCTAGGAGGAGGAAACATGCGCAGACACCCAGCTTCTCCATGGTaGCATCCGTCAGGATGCTGG +
Preference number: 4 (lower is better)
Translates to: QAAVCAVMELGGGNMRRHPASPW*HPSGCW
Trigger: CCAGCATCCTGACGGATGCCACCATGGAGAAGCTGG...GTGTCTGCGCATGTTTCCTCCTCCTAGCTCCATCACTGCGCACACAGCTGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp CAGTCAGAAGATGTCAACATGGATGCCAGGCTGGTGGGCTCCGCCCTTCTCCAATCGGAGAGAATGACCTaGAAGGCGTGGGGCCGATCC +
Preference number: 4 (lower is better)
Translates to: QSEDVNMDARLVGSALLQSERMT*KAWGRS
Trigger: GGATCGGCCCCACGCCTTCCAGGTCATTCTCTCCGA...TTGGAGAAGGGCGGAGCCCACCAGCCTGGCATCCATGTTGACATCTTCTGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp GCCGGGCACCTGATCTGGATCCCTGGAGTGGAGGGACCCTGTCTTAAGCCACACCGGAAGAAGCTGGTCTaGCAATCCTCATGGCACGTA +
Preference number: 4 (lower is better)
Translates to: AGHLIWIPGVEGPCLKPHRKKLV*QSSWHV
Trigger: TACGTGCCATGAGGATTGCCAGACCAGCTTCTTCCG...GTGTGGCTTAAGACAGGGTCCCTCCACTCCAGGGATCCAGATCAGGTGCCCGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp GCAGGCAGCTGTGTGCGCAGTGATGGAGCTAGGAGGAGGAAACATGCGCAGACAAGCTGCTGGCTGTCCTaGGAGAACTCCAAGACGCAG +
Preference number: 4 (lower is better)
Translates to: AGSCVRSDGARRRKHAQTSCWLS*ENSKTQ
Trigger: CTGCGTCTTGGAGTTCTCCCAGGACAGCCAGCAGCT...TGTCTGCGCATGTTTCCTCCTCCTAGCTCCATCACTGCGCACACAGCTGCCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp TGTGTGCGCAGTGATGGAGCTAGGAGGAGGAAACATGCGCAGACACCCCGTGTTTTGTTGGAGGCTTCCTaGATCGCCGTGTGGGGGAGG +
Preference number: 4 (lower is better)
Translates to: CVRSDGARRRKHAQTPRVLLEAS*IAVWGR
Trigger: CCTCCCCCACACGGCGATCCAGGAAGCCTCCAACAA...AACACGGGGTGTCTGCGCATGTTTCCTCCTCCTAGCTCCATCACTGCGCACACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp TCTGGCGAGGCAGGCAGCTGTGTGCGCAGTGATGGAGCTAGGAGGAGGAAACATCCTGATCTGGATCCCTaGAGTGGAGGGACCCTGTCT +
Preference number: 4 (lower is better)
Translates to: SGEAGSCVRSDGARRRKHPDLDP*SGGTLS
Trigger: AGACAGGGTCCCTCCACTCCAGGGATCCAGATCAGG...ATGTTTCCTCCTCCTAGCTCCATCACTGCGCACACAGCTGCCTGCCTCGCCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp TGTTCGTCCTTAGATGGATGGTGTTCTCGGTGCCACTCGGCAGAAATTCTGCAGGCATGCAGAGCCTCCTaGCAGCCAGGGAGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: CSSLDGWCSRCHSAEILQACRAS*QPGRAA
Trigger: GGCAGCCCTCCCTGGCTGCCAGGAGGCTCTGCATGC...CTGCAGAATTTCTGCCGAGTGGCACCGAGAACACCATCCATCTAAGGACGAACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR TCA 90 bp CCGCCCTCCTGGTTCTTTTGTTCGTCCTTAGATGGATGGTGTTCTCGGTGCCACAGGAAGAGCGTCAGGTaGTCGTGGCTGCAGACCAGG +
Preference number: 4 (lower is better)
Translates to: PPSWFFCSSLDGWCSRCHRKSVR*SWLQTR
Trigger: CCTGGTCTGCAGCCACGATCACCTGACGCTCTTCCT...GTGGCACCGAGAACACCATCCATCTAAGGACGAACAAAAGAACCAGGAGGGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR TCA 90 bp GTCAGAAGATGTCAACATGGATGCCAGGCTGGTGGGCTCCGCCCTTCTCCAAGCCCAGCTCGAAACGAATaGACTCTAGCCCGGACACCA +
Preference number: 4 (lower is better)
Translates to: VRRCQHGCQAGGLRPSPSPARNE*TLARTP
Trigger: TGGTGTCCGGGCTAGAGTTCATTCGTTTCGAGCTGG...GCTTGGAGAAGGGCGGAGCCCACCAGCCTGGCATCCATGTTGACATCTTCTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR TCA 90 bp CAGGCAGCTGTGTGCGCAGTGATGGAGCTAGGAGGAGGAAACATGCGCAGACACATGGTGGCCGCCACCTaGTGTAACAGTGCTTGGACT +
Preference number: 4 (lower is better)
Translates to: QAAVCAVMELGGGNMRRHMVAAT*CNSAWT
Trigger: AGTCCAAGCACTGTTACATCAGGTGGCGGCCACCAT...GTGTCTGCGCATGTTTCCTCCTCCTAGCTCCATCACTGCGCACACAGCTGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR TCA 90 bp TCCCGCTTCCCCACGTGGCCAGGAGAGTGTTCAAACACGAACAAGGATGGCTGGATGGTGGCCGCCACCTaGTGTAACAGTGCTTGGACT +
Preference number: 4 (lower is better)
Translates to: SRFPTWPGECSNTNKDGWMVAAT*CNSAWT
Trigger: AGTCCAAGCACTGTTACATCAGGTGGCGGCCACCAT...CCAGCCATCCTTGTTCGTGTTTGAACACTCTCCTGGCCACGTGGGGAAGCGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR TCA 90 bp CCGCCCTCCTGGTTCTTTTGTTCGTCCTTAGATGGATGGTGTTCTCGGTGCCACTGGGCTGGTCTCGCTTaGGCTGGCAGAGAACCTCCT +
Preference number: 4 (lower is better)
Translates to: PPSWFFCSSLDGWCSRCHWAGLA*AGREPP
Trigger: AGGAGGTTCTCTGCCAGCTCAAGCGAGACCAGCCCA...GTGGCACCGAGAACACCATCCATCTAAGGACGAACAAAAGAACCAGGAGGGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR TCA 90 bp GTTCTCGGTGCCACTCGGCAGAAATTCTGCAGACTGAGGCGGAGGCCCGGGAGGGTTCTCGACAGCCTTTaGTCATGGCTGACTTCAAAG +
Preference number: 4 (lower is better)
Translates to: VLGATRQKFCRLRRRPGRVLDSL*SWLTSK
Trigger: CTTTGAAGTCAGCCATGATCAAAGGCTGTCGAGAAC...CCTCCCGGGCCTCCGCCTCAGTCTGCAGAATTTCTGCCGAGTGGCACCGAGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp GTCAGAAGATGTCAACATGGATGCCAGGCTGGTGGGCTCCGCCCTTCTCCAAGCTGCAGCACCTCGATCTaGTTGATGGCCTCTCTCCGA +
Preference number: 4 (lower is better)
Translates to: VRRCQHGCQAGGLRPSPSCSTSI*LMASLR
Trigger: TCGGAGAGAGGCCATCAAGCAGATCGAGGTGCTGCA...GCTTGGAGAAGGGCGGAGCCCACCAGCCTGGCATCCATGTTGACATCTTCTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp CAGTCAGAAGATGTCAACATGGATGCCAGGCTGGTGGGCTCCGCCCTTCTCCAATTGGTGGCCACGTGCTaGAGCACCTCGATCTGCTTG +
Preference number: 4 (lower is better)
Translates to: QSEDVNMDARLVGSALLQLVATC*STSICL
Trigger: CAAGCAGATCGAGGTGCTGCAGCACGTGGCCACCAA...TTGGAGAAGGGCGGAGCCCACCAGCCTGGCATCCATGTTGACATCTTCTGACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp CTCCTGGTTCTTTTGTTCGTCCTTAGATGGATGGTGTTCTCGGTGCCACTCGGCTCCTGGTGGAGGCCTTaGTGCTGGTCAGGTCGGAGG +
Preference number: 4 (lower is better)
Translates to: LLVLLFVLRWMVFSVPLGSWWRP*CWSGRR
Trigger: CCTCCGACCTGACCAGCAGCAAGGCCTCCACCAGGA...GCCGAGTGGCACCGAGAACACCATCCATCTAAGGACGAACAAAAGAACCAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp TGTTCGTCCTTAGATGGATGGTGTTCTCGGTGCCACTCGGCAGAAATTCTGCAGTGCTCTCCGTGGTGCTaGTCGGCCCCTCTCCCTCCT +
Preference number: 4 (lower is better)
Translates to: CSSLDGWCSRCHSAEILQCSPWC*SAPLPP
Trigger: AGGAGGGAGAGGGGCCGAGCAGCACCACGGAGAGCA...CTGCAGAATTTCTGCCGAGTGGCACCGAGAACACCATCCATCTAAGGACGAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp GCAGGCAGCTGTGTGCGCAGTGATGGAGCTAGGAGGAGGAAACATGCGCAGACAGTGTCCAGCAGAAACTaGTTCCTGCGGTTGGTGCAC +
Preference number: 4 (lower is better)
Translates to: AGSCVRSDGARRRKHAQTVSSRN*FLRLVH
Trigger: GTGCACCAACCGCAGGAAGCAGTTTCTGCTGGACAC...TGTCTGCGCATGTTTCCTCCTCCTAGCTCCATCACTGCGCACACAGCTGCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp CAGTCAGAAGATGTCAACATGGATGCCAGGCTGGTGGGCTCCGCCCTTCTCCAATCTTCCAGTGTTCCTTaGCCAGGTAGGAGGTGCCCG +
Preference number: 4 (lower is better)
Translates to: QSEDVNMDARLVGSALLQSSSVP*PGRRCP
Trigger: CGGGCACCTCCTACCTGGGCAAGGAACACTGGAAGA...TTGGAGAAGGGCGGAGCCCACCAGCCTGGCATCCATGTTGACATCTTCTGACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp CTCCAGCCAAGCAGGGGACAGTCAGAAGATGTCAACATGGATGCCAGGCTGGTGACAGCCTGGCAGAGATaGTGCATCCACTCGGCCATC +
Preference number: 4 (lower is better)
Translates to: LQPSRGQSEDVNMDARLVTAWQR*CIHSAI
Trigger: GATGGCCGAGTGGATGCAGCATCTCTGCCAGGCTGT...CACCAGCCTGGCATCCATGTTGACATCTTCTGACTGTCCCCTGCTTGGCTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp TGTTCGTCCTTAGATGGATGGTGTTCTCGGTGCCACTCGGCAGAAATTCTGCAGCCAGGCAGCAGGGTATaGAGGGGCTGGGAGCTACGC +
Preference number: 4 (lower is better)
Translates to: CSSLDGWCSRCHSAEILQPGSRV*RGWELR
Trigger: GCGTAGCTCCCAGCCCCTGCATACCCTGCTGCCTGG...CTGCAGAATTTCTGCCGAGTGGCACCGAGAACACCATCCATCTAAGGACGAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp GCAGTGATGGAGCTAGGAGGAGGAAACATGCGCAGACACCCCGTGTTCCCGCTTCCACCCAGAGTTCAGTaGAGACAGCAATCGGTCCAG +
Preference number: 4 (lower is better)
Translates to: AVMELGGGNMRRHPVFPLPPRVQ*RQQSVQ
Trigger: CTGGACCGATTGCTGTCTGCACTGAACTCTGGGTGG...AAGCGGGAACACGGGGTGTCTGCGCATGTTTCCTCCTCCTAGCTCCATCACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp TGTGTGCGCAGTGATGGAGCTAGGAGGAGGAAACATGCGCAGACACCCCGTGTTAGGCAGGCAGCTGTGTaGGCAGTGATGGAGCTAGGA +
Preference number: 4 (lower is better)
Translates to: CVRSDGARRRKHAQTPRVRQAAV*AVMELG
Trigger: TCCTAGCTCCATCACTGCGCACACAGCTGCCTGCCT...AACACGGGGTGTCTGCGCATGTTTCCTCCTCCTAGCTCCATCACTGCGCACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp CAGGCAGCTGTGTGCGCAGTGATGGAGCTAGGAGGAGGAAACATGCGCAGACACCATCTTCCCAGTCTGTaGTGGGTACAGACGGCACTG +
Preference number: 4 (lower is better)
Translates to: QAAVCAVMELGGGNMRRHHLPSL*WVQTAL
Trigger: CAGTGCCGTCTGTACCCAGCACAGACTGGGAAGATG...GTGTCTGCGCATGTTTCCTCCTCCTAGCTCCATCACTGCGCACACAGCTGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp CCTGGCTCCAGCCAAGCAGGGGACAGTCAGAAGATGTCAACATGGATGCCAGGCCATCTTCCCAGTCTGTaGTGGGTACAGACGGCACTG +
Preference number: 4 (lower is better)
Translates to: PGSSQAGDSQKMSTWMPGHLPSL*WVQTAL
Trigger: CAGTGCCGTCTGTACCCAGCACAGACTGGGAAGATG...GCCTGGCATCCATGTTGACATCTTCTGACTGTCCCCTGCTTGGCTGGAGCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp GATGGAGCTAGGAGGAGGAAACATGCGCAGACACCCCGTGTTCCCGCTTCCCCATGTCATGGTTCCGGATaGCAGGGATCTCATCCTCAC +
Preference number: 4 (lower is better)
Translates to: DGARRRKHAQTPRVPASPCHGSG*QGSHPH
Trigger: GTGAGGATGAGATCCCTGCCATCCGGAACCATGACA...TGGGGAAGCGGGAACACGGGGTGTCTGCGCATGTTTCCTCCTCCTAGCTCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp TGTGTGCGCAGTGATGGAGCTAGGAGGAGGAAACATGCGCAGACACCCCGTGTTAGCCGTGGACCGAGCTaGGAAGGCGGTCTTCAAAGT +
Preference number: 4 (lower is better)
Translates to: CVRSDGARRRKHAQTPRVSRGPS*EGGLQS
Trigger: ACTTTGAAGACCGCCTTCCCAGCTCGGTCCACGGCT...AACACGGGGTGTCTGCGCATGTTTCCTCCTCCTAGCTCCATCACTGCGCACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp CCGCCCTCCTGGTTCTTTTGTTCGTCCTTAGATGGATGGTGTTCTCGGTGCCACCCTTCTCCTGAGAGGTaGTGTGCACGGGGGTGGTGT +
Preference number: 4 (lower is better)
Translates to: PPSWFFCSSLDGWCSRCHPSPER*CARGWC
Trigger: ACACCACCCCCGTGCACACCACCTCTCAGGAGAAGG...GTGGCACCGAGAACACCATCCATCTAAGGACGAACAAAAGAACCAGGAGGGCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp CTCCTGGTTCTTTTGTTCGTCCTTAGATGGATGGTGTTCTCGGTGCCACTCGGCTGGCTGCAGGCGGGGTaGAGTGGACTTGCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: LLVLLFVLRWMVFSVPLGWLQAG*SGLASS
Trigger: TGAGGAGGCAAGTCCACTCCACCCCGCCTGCAGCCA...GCCGAGTGGCACCGAGAACACCATCCATCTAAGGACGAACAAAAGAACCAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375793.2
ENST00000375799.8
CDS-3UTR CCA 90 bp CAGTCAGAAGATGTCAACATGGATGCCAGGCTGGTGGGCTCCGCCCTTCTCCAAGCCCCAAGCGCTCCATaGAGGTGTCCTTCATCTCAG +
Preference number: 4 (lower is better)
Translates to: QSEDVNMDARLVGSALLQAPSAP*RCPSSQ
Trigger: CTGAGATGAAGGACACCTCCATGGAGCGCTTGGGGC...TTGGAGAAGGGCGGAGCCCACCAGCCTGGCATCCATGTTGACATCTTCTGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp CCTGGCTCCAGCCAAGCAGGGGACAGTCAGAAGATGTCAACATGGATGCCAGGCAGCTGCCCGTTGAGCTaGTCGATAACCTTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: PGSSQAGDSQKMSTWMPGSCPLS*SITLLR
Trigger: CCTGAGCAAGGTTATCGACCAGCTCAACGGGCAGCT...GCCTGGCATCCATGTTGACATCTTCTGACTGTCCCCTGCTTGGCTGGAGCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp TGTGTGCGCAGTGATGGAGCTAGGAGGAGGAAACATGCGCAGACACCCCGTGTTTGGTCTCGCTTGAGCTaGCAGAGAACCTCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: CVRSDGARRRKHAQTPRVWSRLS*QRTSWV
Trigger: GACCCAGGAGGTTCTCTGCCAGCTCAAGCGAGACCA...AACACGGGGTGTCTGCGCATGTTTCCTCCTCCTAGCTCCATCACTGCGCACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp TCTGGCGAGGCAGGCAGCTGTGTGCGCAGTGATGGAGCTAGGAGGAGGAAACATCTGAACTCCGAGGAATaGACCATCTCCGAAGGGCTC +
Preference number: 4 (lower is better)
Translates to: SGEAGSCVRSDGARRRKHLNSEE*TISEGL
Trigger: GAGCCCTTCGGAGATGGTCCATTCCTCGGAGTTCAG...ATGTTTCCTCCTCCTAGCTCCATCACTGCGCACACAGCTGCCTGCCTCGCCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp CAGTCAGAAGATGTCAACATGGATGCCAGGCTGGTGGGCTCCGCCCTTCTCCAAGGTATGGCTTCTCTGTaGCCCCTTTCCGGAGCAGGT +
Preference number: 4 (lower is better)
Translates to: QSEDVNMDARLVGSALLQGMASL*PLSGAG
Trigger: ACCTGCTCCGGAAAGGGGCCACAGAGAAGCCATACC...TTGGAGAAGGGCGGAGCCCACCAGCCTGGCATCCATGTTGACATCTTCTGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp CCACCCCCTTTGCTCCTCGGTGCTACAGGCACTGCCGGGTTGAGGGGACAGGCATCACACTTCGATTCTTaGGCCACAAATTTGGCCAGT +
Preference number: 4 (lower is better)
Translates to: PPPLLLGATGTAGLRGQASHFDS*ATNLAS
Trigger: ACTGGCCAAATTTGTGGCCCAAGAATCGAAGTGTGA...TGCCTGTCCCCTCAACCCGGCAGTGCCTGTAGCACCGAGGAGCAAAGGGGGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp TCTGGCGAGGCAGGCAGCTGTGTGCGCAGTGATGGAGCTAGGAGGAGGAAACATCCTTTGGACACAGCCTaGCAGAGATGCTGCATCCAC +
Preference number: 4 (lower is better)
Translates to: SGEAGSCVRSDGARRRKHPLDTA*QRCCIH
Trigger: GTGGATGCAGCATCTCTGCCAGGCTGTGTCCAAAGG...ATGTTTCCTCCTCCTAGCTCCATCACTGCGCACACAGCTGCCTGCCTCGCCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp TTAAGCCACACTCGGTGGTTCTGCCGCCCAGGGCAGGGGTGGACTGTAGGCTCCGGTCCACCTGATAGATaGTTTTCCACCCAGAGTTCA +
Preference number: 4 (lower is better)
Translates to: LSHTRWFCRPGQGWTVGSGPPDR*FSTQSS
Trigger: TGAACTCTGGGTGGAAAACCATCTATCAGGTGGACC...GGAGCCTACAGTCCACCCCTGCCCTGGGCGGCAGAACCACCGAGTGTGGCTTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp CCGCCCTCCTGGTTCTTTTGTTCGTCCTTAGATGGATGGTGTTCTCGGTGCCACTTAAGCCACACTCGGTaGTTCTGCCGCCCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: PPSWFFCSSLDGWCSRCHLSHTR*FCRPGQ
Trigger: CTGCCCTGGGCGGCAGAACCACCGAGTGTGGCTTAA...GTGGCACCGAGAACACCATCCATCTAAGGACGAACAAAAGAACCAGGAGGGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp TTAAGCCACACTCGGTGGTTCTGCCGCCCAGGGCAGGGGTGGACTGTAGGCTCCTTGTTCGTCCTTAGATaGATGGTGTTCTCGGTGCCA +
Preference number: 4 (lower is better)
Translates to: LSHTRWFCRPGQGWTVGSLFVLR*MVFSVP
Trigger: TGGCACCGAGAACACCATCCATCTAAGGACGAACAA...GGAGCCTACAGTCCACCCCTGCCCTGGGCGGCAGAACCACCGAGTGTGGCTTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp TCTGGCGAGGCAGGCAGCTGTGTGCGCAGTGATGGAGCTAGGAGGAGGAAACATGGGGTCCCGCCCTCCTaGTTCTTTTGTTCGTCCTTA +
Preference number: 4 (lower is better)
Translates to: SGEAGSCVRSDGARRRKHGVPPS*FFCSSL
Trigger: TAAGGACGAACAAAAGAACCAGGAGGGCGGGACCCC...ATGTTTCCTCCTCCTAGCTCCATCACTGCGCACACAGCTGCCTGCCTCGCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp CTCCAGCCAAGCAGGGGACAGTCAGAAGATGTCAACATGGATGCCAGGCTGGTGAAACACGAACAAGGATaGCTGGGCACTCAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: LQPSRGQSEDVNMDARLVKHEQG*LGTQGP
Trigger: GGGGCCCTGAGTGCCCAGCCATCCTTGTTCGTGTTT...CACCAGCCTGGCATCCATGTTGACATCTTCTGACTGTCCCCTGCTTGGCTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR TCA 90 bp TCCCGCTTCCCCACGTGGCCAGGAGAGTGTTCAAACACGAACAAGGATGGCTGGGAAGTCCATTGGGGCTaGAAGCCCCTCACTAAAGTC +
Preference number: 4 (lower is better)
Translates to: SRFPTWPGECSNTNKDGWEVHWG*KPLTKV
Trigger: GACTTTAGTGAGGGGCTTTCAGCCCCAATGGACTTC...CCAGCCATCCTTGTTCGTGTTTGAACACTCTCCTGGCCACGTGGGGAAGCGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR TCA 90 bp GCCGGGCACCTGATCTGGATCCCTGGAGTGGAGGGACCCTGTCTTAAGCCACACATGAGCAGGAGCAGGTaGTTGTTGTCTACTCTGAAC +
Preference number: 4 (lower is better)
Translates to: AGHLIWIPGVEGPCLKPHMSRSR*LLSTLN
Trigger: GTTCAGAGTAGACAACAATCACCTGCTCCTGCTCAT...GTGTGGCTTAAGACAGGGTCCCTCCACTCCAGGGATCCAGATCAGGTGCCCGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR TCA 90 bp TCTGGCGAGGCAGGCAGCTGTGTGCGCAGTGATGGAGCTAGGAGGAGGAAACATGGAACACGTGGATCATaGGCAGGAGCAGGTGATTGT +
Preference number: 4 (lower is better)
Translates to: SGEAGSCVRSDGARRRKHGTRGS*AGAGDC
Trigger: ACAATCACCTGCTCCTGCTCATGATCCACGTGTTCC...ATGTTTCCTCCTCCTAGCTCCATCACTGCGCACACAGCTGCCTGCCTCGCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR TCA 90 bp CAGGCAGCTGTGTGCGCAGTGATGGAGCTAGGAGGAGGAAACATGCGCAGACACGGAACACGTGGATCATaGGCAGGAGCAGGTGATTGT +
Preference number: 4 (lower is better)
Translates to: QAAVCAVMELGGGNMRRHGTRGS*AGAGDC
Trigger: ACAATCACCTGCTCCTGCTCATGATCCACGTGTTCC...GTGTCTGCGCATGTTTCCTCCTCCTAGCTCCATCACTGCGCACACAGCTGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR TCA 90 bp CAGGCAGCTGTGTGCGCAGTGATGGAGCTAGGAGGAGGAAACATGCGCAGACACAGACATAGCAGTCTGTaGGCAGCACGTACAGCAGCT +
Preference number: 4 (lower is better)
Translates to: QAAVCAVMELGGGNMRRHRHSSL*AARTAA
Trigger: AGCTGCTGTACGTGCTGCTCACAGACTGCTATGTCT...GTGTCTGCGCATGTTTCCTCCTCCTAGCTCCATCACTGCGCACACAGCTGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR TCA 90 bp CCTGGCTCCAGCCAAGCAGGGGACAGTCAGAAGATGTCAACATGGATGCCAGGCAGACATAGCAGTCTGTaGGCAGCACGTACAGCAGCT +
Preference number: 4 (lower is better)
Translates to: PGSSQAGDSQKMSTWMPGRHSSL*AARTAA
Trigger: AGCTGCTGTACGTGCTGCTCACAGACTGCTATGTCT...GCCTGGCATCCATGTTGACATCTTCTGACTGTCCCCTGCTTGGCTGGAGCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR TCA 90 bp TGTTCGTCCTTAGATGGATGGTGTTCTCGGTGCCACTCGGCAGAAATTCTGCAGAGAGGCGGTCATCCGTaGGGACCAGGCAGCAGGGTA +
Preference number: 4 (lower is better)
Translates to: CSSLDGWCSRCHSAEILQRGGHP*GPGSRV
Trigger: TACCCTGCTGCCTGGTCCTCACGGATGACCGCCTCT...CTGCAGAATTTCTGCCGAGTGGCACCGAGAACACCATCCATCTAAGGACGAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp CTCCTGGTTCTTTTGTTCGTCCTTAGATGGATGGTGTTCTCGGTGCCACTCGGCAGGGCGTGGTCCAGGTaGTCACACAGACGCTGTAGG +
Preference number: 4 (lower is better)
Translates to: LLVLLFVLRWMVFSVPLGRAWSR*SHRRCR
Trigger: CCTACAGCGTCTGTGTGAGCACCTGGACCACGCCCT...GCCGAGTGGCACCGAGAACACCATCCATCTAAGGACGAACAAAAGAACCAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp CAGAGCCCACAGGGCTCGGACCCTCTGCCCCCAGCGACCTCCATTCGCTACCTGATCATTTTGAACAGCTaGTCTTCGTTTTCTCGGAAC +
Preference number: 4 (lower is better)
Translates to: QSPQGSDPLPPATSIRYLIILNS*SSFSRN
Trigger: GTTCCGAGAAAACGAAGAGCAGCTGTTCAAAATGAT...CAGGTAGCGAATGGAGGTCGCTGGGGGCAGAGGGTCCGAGCCCTGTGGGCTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp CCGCCCTCCTGGTTCTTTTGTTCGTCCTTAGATGGATGGTGTTCTCGGTGCCACTCTTCCAGTGTTCCTTaGCCAGGTAGGAGGTGCCCG +
Preference number: 4 (lower is better)
Translates to: PPSWFFCSSLDGWCSRCHSSSVP*PGRRCP
Trigger: CGGGCACCTCCTACCTGGGCAAGGAACACTGGAAGA...GTGGCACCGAGAACACCATCCATCTAAGGACGAACAAAAGAACCAGGAGGGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp CCGCCCTCCTGGTTCTTTTGTTCGTCCTTAGATGGATGGTGTTCTCGGTGCCACAGATGTCAACATGGATaGCAGGCTGGTGGGCTCCGC +
Preference number: 4 (lower is better)
Translates to: PPSWFFCSSLDGWCSRCHRCQHG*QAGGLR
Trigger: GCGGAGCCCACCAGCCTGGCATCCATGTTGACATCT...GTGGCACCGAGAACACCATCCATCTAAGGACGAACAAAAGAACCAGGAGGGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp GCAGTGATGGAGCTAGGAGGAGGAAACATGCGCAGACACCCCGTGTTCCCGCTTTGTCATGGTTCCGGATaGCAGGGATCTCATCCTCAC +
Preference number: 4 (lower is better)
Translates to: AVMELGGGNMRRHPVFPLCHGSG*QGSHPH
Trigger: GTGAGGATGAGATCCCTGCCATCCGGAACCATGACA...AAGCGGGAACACGGGGTGTCTGCGCATGTTTCCTCCTCCTAGCTCCATCACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp CCGCCCTCCTGGTTCTTTTGTTCGTCCTTAGATGGATGGTGTTCTCGGTGCCACAGCCGTGGACCGAGCTaGGAAGGCGGTCTTCAAAGT +
Preference number: 4 (lower is better)
Translates to: PPSWFFCSSLDGWCSRCHSRGPS*EGGLQS
Trigger: ACTTTGAAGACCGCCTTCCCAGCTCGGTCCACGGCT...GTGGCACCGAGAACACCATCCATCTAAGGACGAACAAAAGAACCAGGAGGGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp TGTTCGTCCTTAGATGGATGGTGTTCTCGGTGCCACTCGGCAGAAATTCTGCAGAGACTGTCTGAGCCGTaGACCGAGCTGGGAAGGCGG +
Preference number: 4 (lower is better)
Translates to: CSSLDGWCSRCHSAEILQRLSEP*TELGRR
Trigger: CCGCCTTCCCAGCTCGGTCCACGGCTCAGACAGTCT...CTGCAGAATTTCTGCCGAGTGGCACCGAGAACACCATCCATCTAAGGACGAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp GCAGTGATGGAGCTAGGAGGAGGAAACATGCGCAGACACCCCGTGTTCCCGCTTCTCTTCCACCAGGTATaGCTTCTCTGTGGCCCCTTT +
Preference number: 4 (lower is better)
Translates to: AVMELGGGNMRRHPVFPLLFHQV*LLCGPF
Trigger: AAAGGGGCCACAGAGAAGCCATACCTGGTGGAAGAG...AAGCGGGAACACGGGGTGTCTGCGCATGTTTCCTCCTCCTAGCTCCATCACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp GCAGGCAGCTGTGTGCGCAGTGATGGAGCTAGGAGGAGGAAACATGCGCAGACACTCTTCCACCAGGTATaGCTTCTCTGTGGCCCCTTT +
Preference number: 4 (lower is better)
Translates to: AGSCVRSDGARRRKHAQTLFHQV*LLCGPF
Trigger: AAAGGGGCCACAGAGAAGCCATACCTGGTGGAAGAG...TGTCTGCGCATGTTTCCTCCTCCTAGCTCCATCACTGCGCACACAGCTGCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp AACAGCCGTGACAGTGTGCCTGCCGGCTGGCGTGCCTTCCTTTCCTGCCCACCATCACACTTCGATTCTTaGGCCACAAATTTGGCCAGT +
Preference number: 4 (lower is better)
Translates to: NSRDSVPAGWRAFLSCPPSHFDS*ATNLAS
Trigger: ACTGGCCAAATTTGTGGCCCAAGAATCGAAGTGTGA...TGGTGGGCAGGAAAGGAAGGCACGCCAGCCGGCAGGCACACTGTCACGGCTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp GTCAGAAGATGTCAACATGGATGCCAGGCTGGTGGGCTCCGCCCTTCTCCAAGCGTCTGGCAATCCTCATaGCACGTAAAGAGGCGGTCA +
Preference number: 4 (lower is better)
Translates to: VRRCQHGCQAGGLRPSPSVWQSS*HVKRRS
Trigger: TGACCGCCTCTTTACGTGCCATGAGGATTGCCAGAC...GCTTGGAGAAGGGCGGAGCCCACCAGCCTGGCATCCATGTTGACATCTTCTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp GTCAGAAGATGTCAACATGGATGCCAGGCTGGTGGGCTCCGCCCTTCTCCAAGCAAGAGCGGAAGAAGCTaGTCTGGCAATCCTCATGGC +
Preference number: 4 (lower is better)
Translates to: VRRCQHGCQAGGLRPSPSKSGRS*SGNPHG
Trigger: GCCATGAGGATTGCCAGACCAGCTTCTTCCGCTCTT...GCTTGGAGAAGGGCGGAGCCCACCAGCCTGGCATCCATGTTGACATCTTCTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp CAGGCAGCTGTGTGCGCAGTGATGGAGCTAGGAGGAGGAAACATGCGCAGACACAAGAGCGGAAGAAGCTaGTCTGGCAATCCTCATGGC +
Preference number: 4 (lower is better)
Translates to: QAAVCAVMELGGGNMRRHKSGRS*SGNPHG
Trigger: GCCATGAGGATTGCCAGACCAGCTTCTTCCGCTCTT...GTGTCTGCGCATGTTTCCTCCTCCTAGCTCCATCACTGCGCACACAGCTGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp TGTGTGCGCAGTGATGGAGCTAGGAGGAGGAAACATGCGCAGACACCCCGTGTTTCTGGATCCCTGGAGTaGAGGGACCCTGTCTTAAGC +
Preference number: 4 (lower is better)
Translates to: CVRSDGARRRKHAQTPRVSGSLE*RDPVLS
Trigger: GCTTAAGACAGGGTCCCTCCACTCCAGGGATCCAGA...AACACGGGGTGTCTGCGCATGTTTCCTCCTCCTAGCTCCATCACTGCGCACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp CCGCCCTCCTGGTTCTTTTGTTCGTCCTTAGATGGATGGTGTTCTCGGTGCCACAAACACGAACAAGGATaGCTGGGCACTCAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: PPSWFFCSSLDGWCSRCHKHEQG*LGTQGP
Trigger: GGGGCCCTGAGTGCCCAGCCATCCTTGTTCGTGTTT...GTGGCACCGAGAACACCATCCATCTAAGGACGAACAAAAGAACCAGGAGGGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp GTCAGAAGATGTCAACATGGATGCCAGGCTGGTGGGCTCCGCCCTTCTCCAAGCCAGAAGATGTCAACATaGATGCCAGGCTGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: VRRCQHGCQAGGLRPSPSQKMST*MPGWWA
Trigger: AGCCCACCAGCCTGGCATCCATGTTGACATCTTCTG...GCTTGGAGAAGGGCGGAGCCCACCAGCCTGGCATCCATGTTGACATCTTCTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR TCA 90 bp CAGTCAGAAGATGTCAACATGGATGCCAGGCTGGTGGGCTCCGCCCTTCTCCAAGGAACACGTGGATCATaGGCAGGAGCAGGTGATTGT +
Preference number: 4 (lower is better)
Translates to: QSEDVNMDARLVGSALLQGTRGS*AGAGDC
Trigger: ACAATCACCTGCTCCTGCTCATGATCCACGTGTTCC...TTGGAGAAGGGCGGAGCCCACCAGCCTGGCATCCATGTTGACATCTTCTGACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR TCA 90 bp CTCCTGGTTCTTTTGTTCGTCCTTAGATGGATGGTGTTCTCGGTGCCACTCGGCCGTAGAAGCGCACGGTaGCAGCAGATGCCTCACACT +
Preference number: 4 (lower is better)
Translates to: LLVLLFVLRWMVFSVPLGRRSAR*QQMPHT
Trigger: AGTGTGAGGCATCTGCTGTCACCGTGCGCTTCTACG...GCCGAGTGGCACCGAGAACACCATCCATCTAAGGACGAACAAAAGAACCAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp TGTTCGTCCTTAGATGGATGGTGTTCTCGGTGCCACTCGGCAGAAATTCTGCAGGGAGGACACAGTCTCTaGCGGCTCCTCGTTGAAGGG +
Preference number: 4 (lower is better)
Translates to: CSSLDGWCSRCHSAEILQGGHSL*RLLVEG
Trigger: CCCTTCAACGAGGAGCCGGCAGAGACTGTGTCCTCC...CTGCAGAATTTCTGCCGAGTGGCACCGAGAACACCATCCATCTAAGGACGAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp CTCCTGGTTCTTTTGTTCGTCCTTAGATGGATGGTGTTCTCGGTGCCACTCGGCTGGCATCCGTCAGGATaGTGGGGTAGGGAGGTTCTC +
Preference number: 4 (lower is better)
Translates to: LLVLLFVLRWMVFSVPLGWHPSG*WGREVL
Trigger: GAGAACCTCCCTACCCCAGCATCCTGACGGATGCCA...GCCGAGTGGCACCGAGAACACCATCCATCTAAGGACGAACAAAAGAACCAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp CTCCTGGTTCTTTTGTTCGTCCTTAGATGGATGGTGTTCTCGGTGCCACTCGGCAGGCAGGCAGCTGTGTaGGCAGTGATGGAGCTAGGA +
Preference number: 4 (lower is better)
Translates to: LLVLLFVLRWMVFSVPLGRQAAV*AVMELG
Trigger: TCCTAGCTCCATCACTGCGCACACAGCTGCCTGCCT...GCCGAGTGGCACCGAGAACACCATCCATCTAAGGACGAACAAAAGAACCAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp CAGGCAGCTGTGTGCGCAGTGATGGAGCTAGGAGGAGGAAACATGCGCAGACACGGGTACAGACGGCACTaGTGGAAACACATCTCCAAA +
Preference number: 4 (lower is better)
Translates to: QAAVCAVMELGGGNMRRHGYRRH*WKHISK
Trigger: TTTGGAGATGTGTTTCCAGCAGTGCCGTCTGTACCC...GTGTCTGCGCATGTTTCCTCCTCCTAGCTCCATCACTGCGCACACAGCTGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp CAGTCAGAAGATGTCAACATGGATGCCAGGCTGGTGGGCTCCGCCCTTCTCCAATGTAGGACCTTGTCATaGTTCCGGATGGCAGGGATC +
Preference number: 4 (lower is better)
Translates to: QSEDVNMDARLVGSALLQCRTLS*FRMAGI
Trigger: GATCCCTGCCATCCGGAACCATGACAAGGTCCTACA...TTGGAGAAGGGCGGAGCCCACCAGCCTGGCATCCATGTTGACATCTTCTGACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp GTCAGAAGATGTCAACATGGATGCCAGGCTGGTGGGCTCCGCCCTTCTCCAAGCTTTTCTCGGAACACGTaGATCATGAGCAGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: VRRCQHGCQAGGLRPSPSFSRNT*IMSRSR
Trigger: CCTGCTCCTGCTCATGATCCACGTGTTCCGAGAAAA...GCTTGGAGAAGGGCGGAGCCCACCAGCCTGGCATCCATGTTGACATCTTCTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp CTCCAGCCAAGCAGGGGACAGTCAGAAGATGTCAACATGGATGCCAGGCTGGTGCTCTTCCACCAGGTATaGCTTCTCTGTGGCCCCTTT +
Preference number: 4 (lower is better)
Translates to: LQPSRGQSEDVNMDARLVLFHQV*LLCGPF
Trigger: AAAGGGGCCACAGAGAAGCCATACCTGGTGGAAGAG...CACCAGCCTGGCATCCATGTTGACATCTTCTGACTGTCCCCTGCTTGGCTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp CTCCTGGTTCTTTTGTTCGTCCTTAGATGGATGGTGTTCTCGGTGCCACTCGGCACTGCTTCCTGCGGTTaGTGCACACCAGCTTCACCG +
Preference number: 4 (lower is better)
Translates to: LLVLLFVLRWMVFSVPLGTASCG*CTPASP
Trigger: CGGTGAAGCTGGTGTGCACCAACCGCAGGAAGCAGT...GCCGAGTGGCACCGAGAACACCATCCATCTAAGGACGAACAAAAGAACCAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp TGTGTGCGCAGTGATGGAGCTAGGAGGAGGAAACATGCGCAGACACCCCGTGTTCTTGGGCCACAAATTTaGCCAGTGCCAGCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: CVRSDGARRRKHAQTPRVLGPQI*PVPASP
Trigger: TGGAGAAGCTGGCACTGGCCAAATTTGTGGCCCAAG...AACACGGGGTGTCTGCGCATGTTTCCTCCTCCTAGCTCCATCACTGCGCACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp CAGTCAGAAGATGTCAACATGGATGCCAGGCTGGTGGGCTCCGCCCTTCTCCAACTTGGGCCACAAATTTaGCCAGTGCCAGCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: QSEDVNMDARLVGSALLQLGPQI*PVPASP
Trigger: TGGAGAAGCTGGCACTGGCCAAATTTGTGGCCCAAG...TTGGAGAAGGGCGGAGCCCACCAGCCTGGCATCCATGTTGACATCTTCTGACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp CTCCAGCCAAGCAGGGGACAGTCAGAAGATGTCAACATGGATGCCAGGCTGGTGGTCTGGCAATCCTCATaGCACGTAAAGAGGCGGTCA +
Preference number: 4 (lower is better)
Translates to: LQPSRGQSEDVNMDARLVVWQSS*HVKRRS
Trigger: TGACCGCCTCTTTACGTGCCATGAGGATTGCCAGAC...CACCAGCCTGGCATCCATGTTGACATCTTCTGACTGTCCCCTGCTTGGCTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp CTCCAGCCAAGCAGGGGACAGTCAGAAGATGTCAACATGGATGCCAGGCTGGTGTCGTCCTTAGATGGATaGTGTTCTCGGTGCCACTCG +
Preference number: 4 (lower is better)
Translates to: LQPSRGQSEDVNMDARLVSSLDG*CSRCHS
Trigger: CGAGTGGCACCGAGAACACCATCCATCTAAGGACGA...CACCAGCCTGGCATCCATGTTGACATCTTCTGACTGTCCCCTGCTTGGCTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp CTCCTGGTTCTTTTGTTCGTCCTTAGATGGATGGTGTTCTCGGTGCCACTCGGCCTTCCCAGTCTGTGCTaGGTACAGACGGCACTGCTG +
Preference number: 4 (lower is better)
Translates to: LLVLLFVLRWMVFSVPLGLPSLC*VQTALL
Trigger: CAGCAGTGCCGTCTGTACCCAGCACAGACTGGGAAG...GCCGAGTGGCACCGAGAACACCATCCATCTAAGGACGAACAAAAGAACCAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375799.8
ENST00000642363.1
CDS-3UTR TCA 90 bp CTCCTGGTTCTTTTGTTCGTCCTTAGATGGATGGTGTTCTCGGTGCCACTCGGCCCAGCTCGAAACGAATaGACTCTAGCCCGGACACCA +
Preference number: 4 (lower is better)
Translates to: LLVLLFVLRWMVFSVPLGPARNE*TLARTP
Trigger: TGGTGTCCGGGCTAGAGTTCATTCGTTTCGAGCTGG...GCCGAGTGGCACCGAGAACACCATCCATCTAAGGACGAACAAAAGAACCAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp CAGTCAGAAGATGTCAACATGGATGCCAGGCTGGTGGGCTCCGCCCTTCTCCAATCCATCCTCACTAGATaGGGCAATCGCACTGTCATC +
Preference number: 4 (lower is better)
Translates to: QSEDVNMDARLVGSALLQSILTR*GNRTVI
Trigger: GATGACAGTGCGATTGCCCCATCTAGTGAGGATGGA...TTGGAGAAGGGCGGAGCCCACCAGCCTGGCATCCATGTTGACATCTTCTGACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375793.2
CDS-3UTR CCA 90 bp CTCCTGGTTCTTTTGTTCGTCCTTAGATGGATGGTGTTCTCGGTGCCACTCGGCCTGAACTCCGAGGAATaGACCATCTCCGAAGGGCTC +
Preference number: 4 (lower is better)
Translates to: LLVLLFVLRWMVFSVPLGLNSEE*TISEGL
Trigger: GAGCCCTTCGGAGATGGTCCATTCCTCGGAGTTCAG...GCCGAGTGGCACCGAGAACACCATCCATCTAAGGACGAACAAAAGAACCAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp CTCCTGGTTCTTTTGTTCGTCCTTAGATGGATGGTGTTCTCGGTGCCACTCGGCAGCTTCACCGTCTGCTaGTCAAGGCCAACCGACACA +
Preference number: 4 (lower is better)
Translates to: LLVLLFVLRWMVFSVPLGSFTVC*SRPTDT
Trigger: TGTGTCGGTTGGCCTTGACCAGCAGACGGTGAAGCT...GCCGAGTGGCACCGAGAACACCATCCATCTAAGGACGAACAAAAGAACCAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp GCAGGCAGCTGTGTGCGCAGTGATGGAGCTAGGAGGAGGAAACATGCGCAGACAGGTCCACCTGATAGATaGTTTTCCACCCAGAGTTCA +
Preference number: 4 (lower is better)
Translates to: AGSCVRSDGARRRKHAQTGPPDR*FSTQSS
Trigger: TGAACTCTGGGTGGAAAACCATCTATCAGGTGGACC...TGTCTGCGCATGTTTCCTCCTCCTAGCTCCATCACTGCGCACACAGCTGCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp CTTCCCCAGGAGGCTCTTGACGAAACTCTAGGGAAGGGCCTGGCTCCAGCCAAGTACAGACGGCACTGCTaGAAACACATCTCCAAAATC +
Preference number: 4 (lower is better)
Translates to: LPQEALDETLGKGLAPAKYRRHC*KHISKI
Trigger: GATTTTGGAGATGTGTTTCCAGCAGTGCCGTCTGTA...CTTGGCTGGAGCCAGGCCCTTCCCTAGAGTTTCGTCAAGAGCCTCCTGGGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375799.8
ENST00000642363.1
CDS-3UTR TCA 90 bp GATGGAGCTAGGAGGAGGAAACATGCGCAGACACCCCGTGTTCCCGCTTCCCCAGCCTTTGATCATGGCTaGCTTCAAAGAAGCCAAAAA +
Preference number: 4 (lower is better)
Translates to: DGARRRKHAQTPRVPASPAFDHG*LQRSQK
Trigger: TTTTTGGCTTCTTTGAAGTCAGCCATGATCAAAGGC...TGGGGAAGCGGGAACACGGGGTGTCTGCGCATGTTTCCTCCTCCTAGCTCCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR TCA 90 bp TGTGTGCGCAGTGATGGAGCTAGGAGGAGGAAACATGCGCAGACACCCCGTGTTGTTCTCGACAGCCTTTaGTCATGGCTGACTTCAAAG +
Preference number: 4 (lower is better)
Translates to: CVRSDGARRRKHAQTPRVVLDSL*SWLTSK
Trigger: CTTTGAAGTCAGCCATGATCAAAGGCTGTCGAGAAC...AACACGGGGTGTCTGCGCATGTTTCCTCCTCCTAGCTCCATCACTGCGCACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp CTTCCCCAGGAGGCTCTTGACGAAACTCTAGGGAAGGGCCTGGCTCCAGCCAAGGATCTCATCCTCACATaGAGCAAAATAGCTCTGCAA +
Preference number: 4 (lower is better)
Translates to: LPQEALDETLGKGLAPAKDLILT*SKIALQ
Trigger: TTGCAGAGCTATTTTGCTGCATGTGAGGATGAGATC...CTTGGCTGGAGCCAGGCCCTTCCCTAGAGTTTCGTCAAGAGCCTCCTGGGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp CTCCTGGTTCTTTTGTTCGTCCTTAGATGGATGGTGTTCTCGGTGCCACTCGGCCACAAATTTGGCCAGTaGCAGCTTCTCCATGGTGGC +
Preference number: 4 (lower is better)
Translates to: LLVLLFVLRWMVFSVPLGHKFGQ*QLLHGG
Trigger: GCCACCATGGAGAAGCTGGCACTGGCCAAATTTGTG...GCCGAGTGGCACCGAGAACACCATCCATCTAAGGACGAACAAAAGAACCAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp TGTTCGTCCTTAGATGGATGGTGTTCTCGGTGCCACTCGGCAGAAATTCTGCAGTCTGGATCCCTGGAGTaGAGGGACCCTGTCTTAAGC +
Preference number: 4 (lower is better)
Translates to: CSSLDGWCSRCHSAEILQSGSLE*RDPVLS
Trigger: GCTTAAGACAGGGTCCCTCCACTCCAGGGATCCAGA...CTGCAGAATTTCTGCCGAGTGGCACCGAGAACACCATCCATCTAAGGACGAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp TCCCGCTTCCCCACGTGGCCAGGAGAGTGTTCAAACACGAACAAGGATGGCTGGATAATCCTCACTAGATaGGGCAATCGCACTGTCATC +
Preference number: 4 (lower is better)
Translates to: SRFPTWPGECSNTNKDGWIILTR*GNRTVI
Trigger: GATGACAGTGCGATTGCCCCATCTAGTGAGGATTAT...CCAGCCATCCTTGTTCGTGTTTGAACACTCTCCTGGCCACGTGGGGAAGCGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp TCTGGCGAGGCAGGCAGCTGTGTGCGCAGTGATGGAGCTAGGAGGAGGAAACATGATCTCATCCTCACATaGAGCAAAATAGCTCTGCAA +
Preference number: 4 (lower is better)
Translates to: SGEAGSCVRSDGARRRKHDLILT*SKIALQ
Trigger: TTGCAGAGCTATTTTGCTGCATGTGAGGATGAGATC...ATGTTTCCTCCTCCTAGCTCCATCACTGCGCACACAGCTGCCTGCCTCGCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp GTCAGAAGATGTCAACATGGATGCCAGGCTGGTGGGCTCCGCCCTTCTCCAAGCGATCTCATCCTCACATaGAGCAAAATAGCTCTGCAA +
Preference number: 4 (lower is better)
Translates to: VRRCQHGCQAGGLRPSPSDLILT*SKIALQ
Trigger: TTGCAGAGCTATTTTGCTGCATGTGAGGATGAGATC...GCTTGGAGAAGGGCGGAGCCCACCAGCCTGGCATCCATGTTGACATCTTCTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp TCTGGCGAGGCAGGCAGCTGTGTGCGCAGTGATGGAGCTAGGAGGAGGAAACATCCTCCTCATCTGATCTaGTCTTTTTCTTCTTGCCAA +
Preference number: 4 (lower is better)
Translates to: SGEAGSCVRSDGARRRKHPPHLI*SFSSCQ
Trigger: TTGGCAAGAAGAAAAAGAGCAGATCAGATGAGGAGG...ATGTTTCCTCCTCCTAGCTCCATCACTGCGCACACAGCTGCCTGCCTCGCCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp CCTGGCTCCAGCCAAGCAGGGGACAGTCAGAAGATGTCAACATGGATGCCAGGCCCTCCTCATCTGATCTaGTCTTTTTCTTCTTGCCAA +
Preference number: 4 (lower is better)
Translates to: PGSSQAGDSQKMSTWMPGPPHLI*SFSSCQ
Trigger: TTGGCAAGAAGAAAAAGAGCAGATCAGATGAGGAGG...GCCTGGCATCCATGTTGACATCTTCTGACTGTCCCCTGCTTGGCTGGAGCCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp GTCAGAAGATGTCAACATGGATGCCAGGCTGGTGGGCTCCGCCCTTCTCCAAGCCCTCCTCATCTGATCTaGTCTTTTTCTTCTTGCCAA +
Preference number: 4 (lower is better)
Translates to: VRRCQHGCQAGGLRPSPSPPHLI*SFSSCQ
Trigger: TTGGCAAGAAGAAAAAGAGCAGATCAGATGAGGAGG...GCTTGGAGAAGGGCGGAGCCCACCAGCCTGGCATCCATGTTGACATCTTCTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp TGTTCGTCCTTAGATGGATGGTGTTCTCGGTGCCACTCGGCAGAAATTCTGCAGGGATGGTGTTCTCGGTaGCACTCGGCAGAAATTCTG +
Preference number: 4 (lower is better)
Translates to: CSSLDGWCSRCHSAEILQGWCSR*HSAEIL
Trigger: CAGAATTTCTGCCGAGTGGCACCGAGAACACCATCC...CTGCAGAATTTCTGCCGAGTGGCACCGAGAACACCATCCATCTAAGGACGAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp TGTGTGCGCAGTGATGGAGCTAGGAGGAGGAAACATGCGCAGACACCCCGTGTTTCACACTTCGATTCTTaGGCCACAAATTTGGCCAGT +
Preference number: 4 (lower is better)
Translates to: CVRSDGARRRKHAQTPRVSHFDS*ATNLAS
Trigger: ACTGGCCAAATTTGTGGCCCAAGAATCGAAGTGTGA...AACACGGGGTGTCTGCGCATGTTTCCTCCTCCTAGCTCCATCACTGCGCACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp CTCCAGCCAAGCAGGGGACAGTCAGAAGATGTCAACATGGATGCCAGGCTGGTGATAATCCTCACTAGATaGGGCAATCGCACTGTCATC +
Preference number: 4 (lower is better)
Translates to: LQPSRGQSEDVNMDARLVIILTR*GNRTVI
Trigger: GATGACAGTGCGATTGCCCCATCTAGTGAGGATTAT...CACCAGCCTGGCATCCATGTTGACATCTTCTGACTGTCCCCTGCTTGGCTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp TGTGTGCGCAGTGATGGAGCTAGGAGGAGGAAACATGCGCAGACACCCCGTGTTTACAGACGGCACTGCTaGAAACACATCTCCAAAATC +
Preference number: 4 (lower is better)
Translates to: CVRSDGARRRKHAQTPRVYRRHC*KHISKI
Trigger: GATTTTGGAGATGTGTTTCCAGCAGTGCCGTCTGTA...AACACGGGGTGTCTGCGCATGTTTCCTCCTCCTAGCTCCATCACTGCGCACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375799.8
ENST00000642363.1
CDS-3UTR TCA 90 bp TGTGTGCGCAGTGATGGAGCTAGGAGGAGGAAACATGCGCAGACACCCCGTGTTGCCTTTGATCATGGCTaGCTTCAAAGAAGCCAAAAA +
Preference number: 4 (lower is better)
Translates to: CVRSDGARRRKHAQTPRVAFDHG*LQRSQK
Trigger: TTTTTGGCTTCTTTGAAGTCAGCCATGATCAAAGGC...AACACGGGGTGTCTGCGCATGTTTCCTCCTCCTAGCTCCATCACTGCGCACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR TCA 90 bp CTCCTGGTTCTTTTGTTCGTCCTTAGATGGATGGTGTTCTCGGTGCCACTCGGCGTTCTCGACAGCCTTTaGTCATGGCTGACTTCAAAG +
Preference number: 4 (lower is better)
Translates to: LLVLLFVLRWMVFSVPLGVLDSL*SWLTSK
Trigger: CTTTGAAGTCAGCCATGATCAAAGGCTGTCGAGAAC...GCCGAGTGGCACCGAGAACACCATCCATCTAAGGACGAACAAAAGAACCAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp CAGGCAGCTGTGTGCGCAGTGATGGAGCTAGGAGGAGGAAACATGCGCAGACACATCATTTTGAACAGCTaGTCTTCGTTTTCTCGGAAC +
Preference number: 4 (lower is better)
Translates to: QAAVCAVMELGGGNMRRHIILNS*SSFSRN
Trigger: GTTCCGAGAAAACGAAGAGCAGCTGTTCAAAATGAT...GTGTCTGCGCATGTTTCCTCCTCCTAGCTCCATCACTGCGCACACAGCTGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR GCA 90 bp GCAGTGATGGAGCTAGGAGGAGGAAACATGCGCAGACACCCCGTGTTCCCGCTTATCATTTTGAACAGCTaGTCTTCGTTTTCTCGGAAC +
Preference number: 4 (lower is better)
Translates to: AVMELGGGNMRRHPVFPLIILNS*SSFSRN
Trigger: GTTCCGAGAAAACGAAGAGCAGCTGTTCAAAATGAT...AAGCGGGAACACGGGGTGTCTGCGCATGTTTCCTCCTCCTAGCTCCATCACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR TCA 90 bp TGTTCGTCCTTAGATGGATGGTGTTCTCGGTGCCACTCGGCAGAAATTCTGCAGATGAGCAGGAGCAGGTaGTTGTTGTCTACTCTGAAC +
Preference number: 4 (lower is better)
Translates to: CSSLDGWCSRCHSAEILQMSRSR*LLSTLN
Trigger: GTTCAGAGTAGACAACAATCACCTGCTCCTGCTCAT...CTGCAGAATTTCTGCCGAGTGGCACCGAGAACACCATCCATCTAAGGACGAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CCA 90 bp TGTTCGTCCTTAGATGGATGGTGTTCTCGGTGCCACTCGGCAGAAATTCTGCAGTTGTTCGTCCTTAGATaGATGGTGTTCTCGGTGCCA +
Preference number: 4 (lower is better)
Translates to: CSSLDGWCSRCHSAEILQLFVLR*MVFSVP
Trigger: TGGCACCGAGAACACCATCCATCTAAGGACGAACAA...CTGCAGAATTTCTGCCGAGTGGCACCGAGAACACCATCCATCTAAGGACGAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR TCA 90 bp CTCCTGGTTCTTTTGTTCGTCCTTAGATGGATGGTGTTCTCGGTGCCACTCGGCGCCTTTGATCATGGCTaGCTTCAAAGAAGCCAAAAA +
Preference number: 4 (lower is better)
Translates to: LLVLLFVLRWMVFSVPLGAFDHG*LQRSQK
Trigger: TTTTTGGCTTCTTTGAAGTCAGCCATGATCAAAGGC...GCCGAGTGGCACCGAGAACACCATCCATCTAAGGACGAACAAAAGAACCAGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CAA 90 bp CAGAGCCCACAGGGCTCGGACCCTCTGCCCCCAGCGACCTCCATTCGCTACCTGCGGCTGCGCCCCAGGTaGGTGGCCACGTGCTGCAGC +
Preference number: 5 (lower is better)
Translates to: QSPQGSDPLPPATSIRYLRLRPR*VATCCS
Trigger: GCTGCAGCACGTGGCCACCAACCTGGGGCGCAGCCG...CAGGTAGCGAATGGAGGTCGCTGGGGGCAGAGGGTCCGAGCCCTGTGGGCTCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CAA 90 bp GCCCACAGGGCTCGGACCCTCTGCCCCCAGCGACCTCCATTCGCTACCTGTCGGAGGCTTGGGCTGCCGTaGCGGCTGTCACCGTCCCCC +
Preference number: 5 (lower is better)
Translates to: AHRARTLCPQRPPFATCRRLGLP*RLSPSP
Trigger: GGGGGACGGTGACAGCCGCAACGGCAGCCCAAGCCT...CCGACAGGTAGCGAATGGAGGTCGCTGGGGGCAGAGGGTCCGAGCCCTGTGGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375793.2
ENST00000375799.8
CDS-3UTR CAA 90 bp GTGCATCCGCAGAGCCCACAGGGCTCGGACCCTCTGCCCCCAGCGACCTCCATTGGCCGATCCGTGGTGTaGGCTCTCCGGCAGCCACCG +
Preference number: 5 (lower is better)
Translates to: VHPQSPQGSDPLPPATSIGRSVV*ALRQPP
Trigger: CGGTGGCTGCCGGAGAGCCAACACCACGGATCGGCC...AATGGAGGTCGCTGGGGGCAGAGGGTCCGAGCCCTGTGGGCTCTGCGGATGCAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CAA 90 bp GCCCACAGGGCTCGGACCCTCTGCCCCCAGCGACCTCCATTCGCTACCTGTCGGTCTGCCGGCTCCTCGTaGAAGGGGTTCTGGCGCTGG +
Preference number: 5 (lower is better)
Translates to: AHRARTLCPQRPPFATCRSAGSS*KGFWRW
Trigger: CCAGCGCCAGAACCCCTTCAACGAGGAGCCGGCAGA...CCGACAGGTAGCGAATGGAGGTCGCTGGGGGCAGAGGGTCCGAGCCCTGTGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CAA 90 bp CAGAGCCCACAGGGCTCGGACCCTCTGCCCCCAGCGACCTCCATTCGCTACCTGAGTCCCGCCCAAGGCTaGGGCTGCCGTTGCGGCTGT +
Preference number: 5 (lower is better)
Translates to: QSPQGSDPLPPATSIRYLSPAQG*GCRCGC
Trigger: ACAGCCGCAACGGCAGCCCAAGCCTTGGGCGGGACT...CAGGTAGCGAATGGAGGTCGCTGGGGGCAGAGGGTCCGAGCCCTGTGGGCTCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375793.2
ENST00000375799.8
CDS TCA 90 bp CCTCGCTCTCGGCACTTAGCTCCAGGCAGGGCCGGTCGGAGAGAATaGCCTGGAAGGCGTGGGGCCGATCCGTGGTGTTGGCTCTCCGGC +
Preference number: 5 (lower is better)
Translates to: PRSRHLAPGRAGRRE*PGRRGADPWCWLSG
Trigger: GCCGGAGAGCCAACACCACGGATCGGCCCCACGCCTTCCAGGTCATTCTCTCCGACCGGCCCTGCCTGGAGCTAAGTGCCGAGAGCGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS CCA 90 bp CTTAGCTCCAGGCAGGGCCGGTCGGAGAGAATGACCTGGAAGGCGTaGGGCCGATCCGTGGTGTTGGCTCTCCGGCAGCCACCGCACTGC +
Preference number: 5 (lower is better)
Translates to: LSSRQGRSERMTWKA*GRSVVLALRQPPHC
Trigger: GCAGTGCGGTGGCTGCCGGAGAGCCAACACCACGGATCGGCCCCACGCCTTCCAGGTCATTCTCTCCGACCGGCCCTGCCTGGAGCTAAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CAA 90 bp CTCGGACCCTCTGCCCCCAGCGACCTCCATTCGCTACCTGTCGGGCAGGATGCCCTCCTGGTGGAGGCCTaGCTGCTGGTCAGGTCGGAG +
Preference number: 5 (lower is better)
Translates to: LGPSAPSDLHSLPVGQDALLVEA*LLVRSE
Trigger: CTCCGACCTGACCAGCAGCAAGGCCTCCACCAGGAG...GGCATCCTGCCCGACAGGTAGCGAATGGAGGTCGCTGGGGGCAGAGGGTCCGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CAA 90 bp CTCGGACCCTCTGCCCCCAGCGACCTCCATTCGCTACCTGTCGGGCAGGATGCCTCTGCCGGCTCCTCGTaGAAGGGGTTCTGGCGCTGG +
Preference number: 5 (lower is better)
Translates to: LGPSAPSDLHSLPVGQDASAGSS*KGFWRW
Trigger: CCAGCGCCAGAACCCCTTCAACGAGGAGCCGGCAGA...GGCATCCTGCCCGACAGGTAGCGAATGGAGGTCGCTGGGGGCAGAGGGTCCGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS GCA 90 bp AACAGCCGTGACAGTGTGCCTGCCGGCTGGCGTGCCTTCCTTTCCTaGCCACCAGGGACGCCAACCAGCTCTGCCTCAGCACCAGGGGTC +
Preference number: 5 (lower is better)
Translates to: NSRDSVPAGWRAFLS*PPGTPTSSASAPGV
Trigger: GACCCCTGGTGCTGAGGCAGAGCTGGTTGGCGTCCCTGGTGGGCAGGAAAGGAAGGCACGCCAGCCGGCAGGCACACTGTCACGGCTGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000477849.1
ENST00000642363.1
CDS GCA 90 bp TGTCCTTCATCTCAGGGATCAGCAGGCCCGGCTCGGAGCGCTCGCTaGTCTCCGTGGTGCTGCTCGGCCCCTCTCCCTCCTCCTCCTCAT +
Preference number: 5 (lower is better)
Translates to: CPSSQGSAGPARSAR*SPWCCSAPLPPPPH
Trigger: ATGAGGAGGAGGAGGGAGAGGGGCCGAGCAGCACCACGGAGAGCAGCGAGCGCTCCGAGCCGGGCCTGCTGATCCCTGAGATGAAGGACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642363.1
CDS CCA 90 bp GAGGACACAGTCTCTGCCGGCTCCTCGTTGAAGGGGTTCTGGCGCTaGGTGGGGCTCCTGGTGGAGGCCTTGCTGCTGGTCAGGTCGGAG +
Preference number: 5 (lower is better)
Translates to: EDTVSAGSSLKGFWR*VGLLVEALLLVRSE
Trigger: CTCCGACCTGACCAGCAGCAAGGCCTCCACCAGGAGCCCCACCCAGCGCCAGAACCCCTTCAACGAGGAGCCGGCAGAGACTGTGTCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS CCA 90 bp CTCTCGGCACTTAGCTCCAGGCAGGGCCGGTCGGAGAGAATGACCTaGAAGGCGTGGGGCCGATCCGTGGTGTTGGCTCTCCGGCAGCCA +
Preference number: 5 (lower is better)
Translates to: LSALSSRQGRSERMT*KAWGRSVVLALRQP
Trigger: TGGCTGCCGGAGAGCCAACACCACGGATCGGCCCCACGCCTTCCAGGTCATTCTCTCCGACCGGCCCTGCCTGGAGCTAAGTGCCGAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CAA 90 bp GTGCATCCGCAGAGCCCACAGGGCTCGGACCCTCTGCCCCCAGCGACCTCCATTGCCAGAGGAGAGGTCTaGCAGTCCGTACAGCAGGGC +
Preference number: 5 (lower is better)
Translates to: VHPQSPQGSDPLPPATSIARGEV*QSVQQG
Trigger: GCCCTGCTGTACGGACTGCAAGACCTCTCCTCTGGC...AATGGAGGTCGCTGGGGGCAGAGGGTCCGAGCCCTGTGGGCTCTGCGGATGCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CAA 90 bp GCCCACAGGGCTCGGACCCTCTGCCCCCAGCGACCTCCATTCGCTACCTGTCGGAGCTGGTCGATAACCTaGCTCAGGGGCTGCCCCAAG +
Preference number: 5 (lower is better)
Translates to: AHRARTLCPQRPPFATCRSWSIT*LRGCPK
Trigger: CTTGGGGCAGCCCCTGAGCAAGGTTATCGACCAGCT...CCGACAGGTAGCGAATGGAGGTCGCTGGGGGCAGAGGGTCCGAGCCCTGTGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CAA 90 bp CGGACCCTCTGCCCCCAGCGACCTCCATTCGCTACCTGTCGGGCAGGATGCCCAAGGAACATGCAGCGGTaGGCCAAGCCCTGCAGGGTC +
Preference number: 5 (lower is better)
Translates to: RTLCPQRPPFATCRAGCPRNMQR*AKPCRV
Trigger: GACCCTGCAGGGCTTGGCCAACCGCTGCATGTTCCT...TGGGCATCCTGCCCGACAGGTAGCGAATGGAGGTCGCTGGGGGCAGAGGGTCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS CCA 90 bp TCAGAGGAGGACACAGTCTCTGCCGGCTCCTCGTTGAAGGGGTTCTaGCGCTGGGTGGGGCTCCTGGTGGAGGCCTTGCTGCTGGTCAGG +
Preference number: 5 (lower is better)
Translates to: SEEDTVSAGSSLKGF*RWVGLLVEALLLVR
Trigger: CCTGACCAGCAGCAAGGCCTCCACCAGGAGCCCCACCCAGCGCCAGAACCCCTTCAACGAGGAGCCGGCAGAGACTGTGTCCTCCTCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CAA 90 bp CCTGGCTCCAGCCAAGCAGGGGACAGTCAGAAGATGTCAACATGGATGCCAGGCCGGCTGCGCCCCAGGTaGGTGGCCACGTGCTGCAGC +
Preference number: 5 (lower is better)
Translates to: PGSSQAGDSQKMSTWMPGRLRPR*VATCCS
Trigger: GCTGCAGCACGTGGCCACCAACCTGGGGCGCAGCCG...GCCTGGCATCCATGTTGACATCTTCTGACTGTCCCCTGCTTGGCTGGAGCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CAA 90 bp CGGACCCTCTGCCCCCAGCGACCTCCATTCGCTACCTGTCGGGCAGGATGCCCAAGCTGGTCGATAACCTaGCTCAGGGGCTGCCCCAAG +
Preference number: 5 (lower is better)
Translates to: RTLCPQRPPFATCRAGCPSWSIT*LRGCPK
Trigger: CTTGGGGCAGCCCCTGAGCAAGGTTATCGACCAGCT...TGGGCATCCTGCCCGACAGGTAGCGAATGGAGGTCGCTGGGGGCAGAGGGTCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CAA 90 bp CAGAGCCCACAGGGCTCGGACCCTCTGCCCCCAGCGACCTCCATTCGCTACCTGGGGTCCAGCTGCCCGTaGAGCTGGTCGATAACCTTG +
Preference number: 5 (lower is better)
Translates to: QSPQGSDPLPPATSIRYLGSSCP*SWSITL
Trigger: CAAGGTTATCGACCAGCTCAACGGGCAGCTGGACCC...CAGGTAGCGAATGGAGGTCGCTGGGGGCAGAGGGTCCGAGCCCTGTGGGCTCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CAA 90 bp CCACCCCCTTTGCTCCTCGGTGCTACAGGCACTGCCGGGTTGAGGGGACAGGCACTGGGCTGGTCTCGCTaGAGCTGGCAGAGAACCTCC +
Preference number: 5 (lower is better)
Translates to: PPPLLLGATGTAGLRGQALGWSR*SWQRTS
Trigger: GGAGGTTCTCTGCCAGCTCAAGCGAGACCAGCCCAG...TGCCTGTCCCCTCAACCCGGCAGTGCCTGTAGCACCGAGGAGCAAAGGGGGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CAA 90 bp CTCGGTGCCACTCGGCAGAAATTCTGCAGACTGAGGCGGAGGCCCGGGAGGAGGTACAGCAGCTGCAGGTaGCCCTCCATGTGCCCGGTG +
Preference number: 5 (lower is better)
Translates to: LGATRQKFCRLRRRPGRRYSSCR*PSMCPV
Trigger: CACCGGGCACATGGAGGGCAACCTGCAGCTGCTGTA...CCTCCTCCCGGGCCTCCGCCTCAGTCTGCAGAATTTCTGCCGAGTGGCACCGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CAA 90 bp CAGAGCCCACAGGGCTCGGACCCTCTGCCCCCAGCGACCTCCATTCGCTACCTGTGCAGCATGCCTTCTTaGGTGATGGTGCCCTCGGGG +
Preference number: 5 (lower is better)
Translates to: QSPQGSDPLPPATSIRYLCSMPS*VMVPSG
Trigger: CCCCGAGGGCACCATCACCAAAGAAGGCATGCTGCA...CAGGTAGCGAATGGAGGTCGCTGGGGGCAGAGGGTCCGAGCCCTGTGGGCTCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CAA 90 bp CTCGGACCCTCTGCCCCCAGCGACCTCCATTCGCTACCTGTCGGGCAGGATGCCTGCAGCATGCCTTCTTaGGTGATGGTGCCCTCGGGG +
Preference number: 5 (lower is better)
Translates to: LGPSAPSDLHSLPVGQDACSMPS*VMVPSG
Trigger: CCCCGAGGGCACCATCACCAAAGAAGGCATGCTGCA...GGCATCCTGCCCGACAGGTAGCGAATGGAGGTCGCTGGGGGCAGAGGGTCCGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CAA 90 bp CCACCCCCTTTGCTCCTCGGTGCTACAGGCACTGCCGGGTTGAGGGGACAGGCAAAGACGCAGTACTCCTaGCCCGGCTCGGTGGAGACG +
Preference number: 5 (lower is better)
Translates to: PPPLLLGATGTAGLRGQAKTQYS*PGSVET
Trigger: CGTCTCCACCGAGCCGGGCAAGGAGTACTGCGTCTT...TGCCTGTCCCCTCAACCCGGCAGTGCCTGTAGCACCGAGGAGCAAAGGGGGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CAA 90 bp GGTGTTCTCGGTGCCACTCGGCAGAAATTCTGCAGACTGAGGCGGAGGCCCGGGCCCCATCCACCCCCTTaGCTCCTCGGTGCTACAGGC +
Preference number: 5 (lower is better)
Translates to: GVLGATRQKFCRLRRRPGPHPPP*LLGATG
Trigger: GCCTGTAGCACCGAGGAGCAAAGGGGGTGGATGGGG...CCCGGGCCTCCGCCTCAGTCTGCAGAATTTCTGCCGAGTGGCACCGAGAACACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS GCA 90 bp GCTACGCCCTGGGGGATGACCCCTTTGGACACAGCCTGGCAGAGATaGTGCATCCACTCGGCCATCTCGGCCTCGCTCTCGGCACTTAGC +
Preference number: 5 (lower is better)
Translates to: ATPWGMTPLDTAWQR*CIHSAISASLSALS
Trigger: GCTAAGTGCCGAGAGCGAGGCCGAGATGGCCGAGTGGATGCAGCATCTCTGCCAGGCTGTGTCCAAAGGGGTCATCCCCCAGGGCGTAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000477849.1
ENST00000642363.1
CDS-3UTR CAA 90 bp GCCCACAGGGCTCGGACCCTCTGCCCCCAGCGACCTCCATTCGCTACCTGTCGGAGCACCTCGATCTGCTaGATGGCCTCTCTCCGAGTA +
Preference number: 5 (lower is better)
Translates to: AHRARTLCPQRPPFATCRSTSIC*MASLRV
Trigger: TACTCGGAGAGAGGCCATCAAGCAGATCGAGGTGCT...CCGACAGGTAGCGAATGGAGGTCGCTGGGGGCAGAGGGTCCGAGCCCTGTGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CAA 90 bp CTCCAGCCAAGCAGGGGACAGTCAGAAGATGTCAACATGGATGCCAGGCTGGTGCGGCTGCGCCCCAGGTaGGTGGCCACGTGCTGCAGC +
Preference number: 5 (lower is better)
Translates to: LQPSRGQSEDVNMDARLVRLRPR*VATCCS
Trigger: GCTGCAGCACGTGGCCACCAACCTGGGGCGCAGCCG...CACCAGCCTGGCATCCATGTTGACATCTTCTGACTGTCCCCTGCTTGGCTGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CAA 90 bp CAGAGCCCACAGGGCTCGGACCCTCTGCCCCCAGCGACCTCCATTCGCTACCTGTCCAAGGAGTTCTCGTaGAGGGCCAGGTACAGCCAG +
Preference number: 5 (lower is better)
Translates to: QSPQGSDPLPPATSIRYLSKEFS*RARYSQ
Trigger: CTGGCTGTACCTGGCCCTCAACGAGAACTCCTTGGA...CAGGTAGCGAATGGAGGTCGCTGGGGGCAGAGGGTCCGAGCCCTGTGGGCTCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CAA 90 bp CGGACCCTCTGCCCCCAGCGACCTCCATTCGCTACCTGTCGGGCAGGATGCCCATCCAAGGAGTTCTCGTaGAGGGCCAGGTACAGCCAG +
Preference number: 5 (lower is better)
Translates to: RTLCPQRPPFATCRAGCPSKEFS*RARYSQ
Trigger: CTGGCTGTACCTGGCCCTCAACGAGAACTCCTTGGA...TGGGCATCCTGCCCGACAGGTAGCGAATGGAGGTCGCTGGGGGCAGAGGGTCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CAA 90 bp GCCGGGCACCTGATCTGGATCCCTGGAGTGGAGGGACCCTGTCTTAAGCCACACCTCCTGGTGGAGGCCTaGCTGCTGGTCAGGTCGGAG +
Preference number: 5 (lower is better)
Translates to: AGHLIWIPGVEGPCLKPHLLVEA*LLVRSE
Trigger: CTCCGACCTGACCAGCAGCAAGGCCTCCACCAGGAG...GTGTGGCTTAAGACAGGGTCCCTCCACTCCAGGGATCCAGATCAGGTGCCCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CAA 90 bp CCACCCCCTTTGCTCCTCGGTGCTACAGGCACTGCCGGGTTGAGGGGACAGGCAGGGTCCAGCTGCCCGTaGAGCTGGTCGATAACCTTG +
Preference number: 5 (lower is better)
Translates to: PPPLLLGATGTAGLRGQAGSSCP*SWSITL
Trigger: CAAGGTTATCGACCAGCTCAACGGGCAGCTGGACCC...TGCCTGTCCCCTCAACCCGGCAGTGCCTGTAGCACCGAGGAGCAAAGGGGGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CAA 90 bp CTCGGTGCCACTCGGCAGAAATTCTGCAGACTGAGGCGGAGGCCCGGGAGGAGGTCCTCCCTCTTCTTCTaGGCCAGCAGCCTCAGGGCT +
Preference number: 5 (lower is better)
Translates to: LGATRQKFCRLRRRPGRRSSLFF*ASSLRA
Trigger: AGCCCTGAGGCTGCTGGCCAAGAAGAAGAGGGAGGA...CCTCCTCCCGGGCCTCCGCCTCAGTCTGCAGAATTTCTGCCGAGTGGCACCGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CAA 90 bp AACAGCCGTGACAGTGTGCCTGCCGGCTGGCGTGCCTTCCTTTCCTGCCCACCAAAGACGCAGTACTCCTaGCCCGGCTCGGTGGAGACG +
Preference number: 5 (lower is better)
Translates to: NSRDSVPAGWRAFLSCPPKTQYS*PGSVET
Trigger: CGTCTCCACCGAGCCGGGCAAGGAGTACTGCGTCTT...TGGTGGGCAGGAAAGGAAGGCACGCCAGCCGGCAGGCACACTGTCACGGCTGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS TCA 90 bp GGTTCTCCTGGAACAACCGCAGGTAGCTCTCCAAGGAGTTCTCGTTaGGGGCCAGGTACAGCCAGGCACGGCTGCGCCCCAGGTTGGTGG +
Preference number: 5 (lower is better)
Translates to: GSPGTTAGSSPRSSR*GPGTARHGCAPGWW
Trigger: CCACCAACCTGGGGCGCAGCCGTGCCTGGCTGTACCTGGCCCTCAACGAGAACTCCTTGGAGAGCTACCTGCGGTTGTTCCAGGAGAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS TCA 90 bp ACTCCAAGACGCAGTACTCCTTGCCCGGCTCGGTGGAGACGGCGCTaGTGTCGCCCAGCTTGGCTGTGCCCAAAGAGCGGAAGAAGCTGG +
Preference number: 5 (lower is better)
Translates to: TPRRSTPCPARWRRR*CRPAWLCPKSGRSW
Trigger: CCAGCTTCTTCCGCTCTTTGGGCACAGCCAAGCTGGGCGACATCAGCGCCGTCTCCACCGAGCCGGGCAAGGAGTACTGCGTCTTGGAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000477849.1
ENST00000642363.1
CDS TCA 90 bp GGTTCTCCTGGAACAACCGCAGGTAGCTCTCCAAGGAGTTCTCGTTaGGGGCCAGGTACAGCCAGGCACGGCCCGTACAGCAGGGCGTGG +
Preference number: 5 (lower is better)
Translates to: GSPGTTAGSSPRSSR*GPGTARHGPYSRAW
Trigger: CCACGCCCTGCTGTACGGGCCGTGCCTGGCTGTACCTGGCCCTCAACGAGAACTCCTTGGAGAGCTACCTGCGGTTGTTCCAGGAGAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462455.1
CDS GCA 90 bp CGGCTGCGCCCCAGGTTGGTGGCCACGTGCTGCAGCACCTCGATCTaGTTGATGGCCTCTCTCCGAGTAAAATGCACCACGAGCACCCAG +
Preference number: 5 (lower is better)
Translates to: RLRPRLVATCCSTSI*LMASLRVKCTTSTQ
Trigger: CTGGGTGCTCGTGGTGCATTTTACTCGGAGAGAGGCCATCAAGCAGATCGAGGTGCTGCAGCACGTGGCCACCAACCTGGGGCGCAGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS GCA 90 bp GCCAGGTACAGCCAGGCACGGCTGCGCCCCAGGTTGGTGGCCACGTaGTGCAGCACCTCGATCTGCTTGATGGCCTCTCTCCGAGTAAAA +
Preference number: 5 (lower is better)
Translates to: ARYSQARLRPRLVAT*CSTSICLMASLRVK
Trigger: TTTTACTCGGAGAGAGGCCATCAAGCAGATCGAGGTGCTGCAGCACGTGGCCACCAACCTGGGGCGCAGCCGTGCCTGGCTGTACCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS GCA 90 bp CCAGGTACAGCCAGGCACGGCCCGTACAGCAGGGCGTGGTCCAGGTaGTCACACAGACGCTGTAGGACCTTGTCATGGTTCCGGATGGCA +
Preference number: 5 (lower is better)
Translates to: PGTARHGPYSRAWSR*SHRRCRTLSWFRMA
Trigger: TGCCATCCGGAACCATGACAAGGTCCTACAGCGTCTGTGTGAGCACCTGGACCACGCCCTGCTGTACGGGCCGTGCCTGGCTGTACCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462455.1
CDS-3UTR CAA 90 bp GCCGGGCACCTGATCTGGATCCCTGGAGTGGAGGGACCCTGTCTTAAGCCACACCTGGGCTGGTCTCGCTaGAGCTGGCAGAGAACCTCC +
Preference number: 5 (lower is better)
Translates to: AGHLIWIPGVEGPCLKPHLGWSR*SWQRTS
Trigger: GGAGGTTCTCTGCCAGCTCAAGCGAGACCAGCCCAG...GTGTGGCTTAAGACAGGGTCCCTCCACTCCAGGGATCCAGATCAGGTGCCCGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CAA 90 bp GTGCATCCGCAGAGCCCACAGGGCTCGGACCCTCTGCCCCCAGCGACCTCCATTTCTTGGGCCACAAATTaGGCCAGTGCCAGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: VHPQSPQGSDPLPPATSISWATN*ASASFS
Trigger: GGAGAAGCTGGCACTGGCCAAATTTGTGGCCCAAGA...AATGGAGGTCGCTGGGGGCAGAGGGTCCGAGCCCTGTGGGCTCTGCGGATGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CAA 90 bp GGTGTTCTCGGTGCCACTCGGCAGAAATTCTGCAGACTGAGGCGGAGGCCCGGGTGGGGGATGACCCCTTaGGACACAGCCTGGCAGAGA +
Preference number: 5 (lower is better)
Translates to: GVLGATRQKFCRLRRRPGWGMTP*DTAWQR
Trigger: TCTCTGCCAGGCTGTGTCCAAAGGGGTCATCCCCCA...CCCGGGCCTCCGCCTCAGTCTGCAGAATTTCTGCCGAGTGGCACCGAGAACACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CAA 90 bp GCCGGGCACCTGATCTGGATCCCTGGAGTGGAGGGACCCTGTCTTAAGCCACACCTGATGTCGCCCAGCTaGGCTGTGCCCAAAGAGCGG +
Preference number: 5 (lower is better)
Translates to: AGHLIWIPGVEGPCLKPHLMSPS*AVPKER
Trigger: CCGCTCTTTGGGCACAGCCAAGCTGGGCGACATCAG...GTGTGGCTTAAGACAGGGTCCCTCCACTCCAGGGATCCAGATCAGGTGCCCGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CAA 90 bp GATGGAGCTAGGAGGAGGAAACATGCGCAGACACCCCGTGTTCCCGCTTCCCCACCCCATCCACCCCCTTaGCTCCTCGGTGCTACAGGC +
Preference number: 5 (lower is better)
Translates to: DGARRRKHAQTPRVPASPPHPPP*LLGATG
Trigger: GCCTGTAGCACCGAGGAGCAAAGGGGGTGGATGGGG...TGGGGAAGCGGGAACACGGGGTGTCTGCGCATGTTTCCTCCTCCTAGCTCCATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS GCA 90 bp AGGTACAGCCAGGCACGGCTGCGCCCCAGGTTGGTGGCCACGTGCTaGAGCACCTCGATCTGCTTGATGGCCTCTCTCCGAGTAAAATGC +
Preference number: 5 (lower is better)
Translates to: RYSQARLRPRLVATC*STSICLMASLRVKC
Trigger: GCATTTTACTCGGAGAGAGGCCATCAAGCAGATCGAGGTGCTGCAGCACGTGGCCACCAACCTGGGGCGCAGCCGTGCCTGGCTGTACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS GCA 90 bp GGGTCCAGCTGCCCGTTGAGCTGGTCGATAACCTTGCTCAGGGGCTaGCCCAAGCGCTCCATGGAGGTGTCCTTCATCTCAGGGATCAGC +
Preference number: 5 (lower is better)
Translates to: GSSCPLSWSITLLRG*PKRSMEVSFISGIS
Trigger: GCTGATCCCTGAGATGAAGGACACCTCCATGGAGCGCTTGGGGCAGCCCCTGAGCAAGGTTATCGACCAGCTCAACGGGCAGCTGGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS CCA 90 bp CTGCCGTTGCGGCTGTCACCGTCCCCCTGCTTGGCACATTTCTTCTaGCTGCAGGCGGGGTGGAGTGGACTTGCCTCCTCATCTGATCTG +
Preference number: 5 (lower is better)
Translates to: LPLRLSPSPCLAHFF*LQAGWSGLASSSDL
Trigger: CAGATCAGATGAGGAGGCAAGTCCACTCCACCCCGCCTGCAGCCAGAAGAAATGTGCCAAGCAGGGGGACGGTGACAGCCGCAACGGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375793.2
ENST00000375799.8
CDS CCA 90 bp TCATCCACCCCAGAATCCTCAGCGCTACTCAGACACGGGCTGGGCTaGTCTCGCTTGAGCTGGCAGAGAACCTCCTGGGTCCCAGGCTCT +
Preference number: 5 (lower is better)
Translates to: SSTPESSALLRHGLG*SRLSWQRTSWVPGS
Trigger: AGAGCCTGGGACCCAGGAGGTTCTCTGCCAGCTCAAGCGAGACCAGCCCAGCCCGTGTCTGAGTAGCGCTGAGGATTCTGGGGTGGATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS CCA 90 bp GAGGCTCGGCCGCGGCAGAGACTGTCGCTCCGCTGCCAGGCGCTGTaGATGAGGCTCAAGGCATCCTCGAATTTCTTCTTGTTGGAGGCT +
Preference number: 5 (lower is better)
Translates to: EARPRQRLSLRCQAL*MRLKASSNFFLLEA
Trigger: AGCCTCCAACAAGAAGAAATTCGAGGATGCCTTGAGCCTCATCCACAGCGCCTGGCAGCGGAGCGACAGTCTCTGCCGCGGCCGAGCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000477849.1
ENST00000642363.1
CDS-3UTR CAA 90 bp GATGGAGCTAGGAGGAGGAAACATGCGCAGACACCCCGTGTTCCCGCTTCCCCAGCCAGAGGAGAGGTCTaGCAGTCCGTACAGCAGGGC +
Preference number: 5 (lower is better)
Translates to: DGARRRKHAQTPRVPASPARGEV*QSVQQG
Trigger: GCCCTGCTGTACGGACTGCAAGACCTCTCCTCTGGC...TGGGGAAGCGGGAACACGGGGTGTCTGCGCATGTTTCCTCCTCCTAGCTCCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CAA 90 bp TTAAGCCACACTCGGTGGTTCTGCCGCCCAGGGCAGGGGTGGACTGTAGGCTCCTCATCCCACTCCAGGTaGGTGGAGGTGACGGAGTTG +
Preference number: 5 (lower is better)
Translates to: LSHTRWFCRPGQGWTVGSSSHSR*VEVTEL
Trigger: CAACTCCGTCACCTCCACCAACCTGGAGTGGGATGA...GGAGCCTACAGTCCACCCCTGCCCTGGGCGGCAGAACCACCGAGTGTGGCTTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CAA 90 bp GCAGTGATGGAGCTAGGAGGAGGAAACATGCGCAGACACCCCGTGTTCCCGCTTTCTGCCGGCTCCTCGTaGAAGGGGTTCTGGCGCTGG +
Preference number: 5 (lower is better)
Translates to: AVMELGGGNMRRHPVFPLSAGSS*KGFWRW
Trigger: CCAGCGCCAGAACCCCTTCAACGAGGAGCCGGCAGA...AAGCGGGAACACGGGGTGTCTGCGCATGTTTCCTCCTCCTAGCTCCATCACTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CAA 90 bp CCGCCCTCCTGGTTCTTTTGTTCGTCCTTAGATGGATGGTGTTCTCGGTGCCACAGGCTTGGGCTGCCGTaGCGGCTGTCACCGTCCCCC +
Preference number: 5 (lower is better)
Translates to: PPSWFFCSSLDGWCSRCHRLGLP*RLSPSP
Trigger: GGGGGACGGTGACAGCCGCAACGGCAGCCCAAGCCT...GTGGCACCGAGAACACCATCCATCTAAGGACGAACAAAAGAACCAGGAGGGCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375793.2
ENST00000375799.8
CDS-3UTR CAA 90 bp CTTCCCCAGGAGGCTCTTGACGAAACTCTAGGGAAGGGCCTGGCTCCAGCCAAGTACAGCAGCTGCAGGTaGCCCTCCATGTGCCCGGTG +
Preference number: 5 (lower is better)
Translates to: LPQEALDETLGKGLAPAKYSSCR*PSMCPV
Trigger: CACCGGGCACATGGAGGGCAACCTGCAGCTGCTGTA...CTTGGCTGGAGCCAGGCCCTTCCCTAGAGTTTCGTCAAGAGCCTCCTGGGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CAA 90 bp CTTCCCCAGGAGGCTCTTGACGAAACTCTAGGGAAGGGCCTGGCTCCAGCCAAGAAGACGCAGTACTCCTaGCCCGGCTCGGTGGAGACG +
Preference number: 5 (lower is better)
Translates to: LPQEALDETLGKGLAPAKKTQYS*PGSVET
Trigger: CGTCTCCACCGAGCCGGGCAAGGAGTACTGCGTCTT...CTTGGCTGGAGCCAGGCCCTTCCCTAGAGTTTCGTCAAGAGCCTCCTGGGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS TCA 90 bp GCTTCTCTGTGGCCCCTTTCCGGAGCAGGTAGACATAGCAGTCTGTaGGCAGCACGTACAGCAGCTGCAGGTTGCCCTCCATGTGCCCGG +
Preference number: 5 (lower is better)
Translates to: ASLWPLSGAGRHSSL*AARTAAAGCPPCAR
Trigger: CCGGGCACATGGAGGGCAACCTGCAGCTGCTGTACGTGCTGCTCACAGACTGCTATGTCTACCTGCTCCGGAAAGGGGCCACAGAGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS TCA 90 bp CTCGGCCGCGGCAGAGACTGTCGCTCCGCTGCCAGGCGCTGTGGATaGGGCTCAAGGCATCCTCGAATTTCTTCTTGTTGGAGGCTTCCT +
Preference number: 5 (lower is better)
Translates to: LGRGRDCRSAARRCG*GSRHPRISSCWRLP
Trigger: AGGAAGCCTCCAACAAGAAGAAATTCGAGGATGCCTTGAGCCTCATCCACAGCGCCTGGCAGCGGAGCGACAGTCTCTGCCGCGGCCGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000477849.1
ENST00000642363.1
CDS-3UTR CAA 90 bp TTAAGCCACACTCGGTGGTTCTGCCGCCCAGGGCAGGGGTGGACTGTAGGCTCCAGACGCTGTAGGACCTaGTCATGGTTCCGGATGGCA +
Preference number: 5 (lower is better)
Translates to: LSHTRWFCRPGQGWTVGSRRCRT*SWFRMA
Trigger: TGCCATCCGGAACCATGACAAGGTCCTACAGCGTCT...GGAGCCTACAGTCCACCCCTGCCCTGGGCGGCAGAACCACCGAGTGTGGCTTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CAA 90 bp TCCCGCTTCCCCACGTGGCCAGGAGAGTGTTCAAACACGAACAAGGATGGCTGGGCCAGAGGAGAGGTCTaGCAGTCCGTACAGCAGGGC +
Preference number: 5 (lower is better)
Translates to: SRFPTWPGECSNTNKDGWARGEV*QSVQQG
Trigger: GCCCTGCTGTACGGACTGCAAGACCTCTCCTCTGGC...CCAGCCATCCTTGTTCGTGTTTGAACACTCTCCTGGCCACGTGGGGAAGCGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CAA 90 bp GTTCTCGGTGCCACTCGGCAGAAATTCTGCAGACTGAGGCGGAGGCCCGGGAGGAGCACCTCGATCTGCTaGATGGCCTCTCTCCGAGTA +
Preference number: 5 (lower is better)
Translates to: VLGATRQKFCRLRRRPGRSTSIC*MASLRV
Trigger: TACTCGGAGAGAGGCCATCAAGCAGATCGAGGTGCT...CCTCCCGGGCCTCCGCCTCAGTCTGCAGAATTTCTGCCGAGTGGCACCGAGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CAA 90 bp TTAAGCCACACTCGGTGGTTCTGCCGCCCAGGGCAGGGGTGGACTGTAGGCTCCAGCACCTCGATCTGCTaGATGGCCTCTCTCCGAGTA +
Preference number: 5 (lower is better)
Translates to: LSHTRWFCRPGQGWTVGSSTSIC*MASLRV
Trigger: TACTCGGAGAGAGGCCATCAAGCAGATCGAGGTGCT...GGAGCCTACAGTCCACCCCTGCCCTGGGCGGCAGAACCACCGAGTGTGGCTTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CAA 90 bp CTTCCCCAGGAGGCTCTTGACGAAACTCTAGGGAAGGGCCTGGCTCCAGCCAAGCGGGGTGGAGTGGACTaGCCTCCTCATCTGATCTGC +
Preference number: 5 (lower is better)
Translates to: LPQEALDETLGKGLAPAKRGGVD*PPHLIC
Trigger: GCAGATCAGATGAGGAGGCAAGTCCACTCCACCCCG...CTTGGCTGGAGCCAGGCCCTTCCCTAGAGTTTCGTCAAGAGCCTCCTGGGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375793.2
ENST00000375799.8
CDS-3UTR CAA 90 bp CAGGCAGCTGTGTGCGCAGTGATGGAGCTAGGAGGAGGAAACATGCGCAGACACAGGAACATGCAGCGGTaGGCCAAGCCCTGCAGGGTC +
Preference number: 5 (lower is better)
Translates to: QAAVCAVMELGGGNMRRHRNMQR*AKPCRV
Trigger: GACCCTGCAGGGCTTGGCCAACCGCTGCATGTTCCT...GTGTCTGCGCATGTTTCCTCCTCCTAGCTCCATCACTGCGCACACAGCTGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CAA 90 bp GCAGGCAGCTGTGTGCGCAGTGATGGAGCTAGGAGGAGGAAACATGCGCAGACAAGGAACATGCAGCGGTaGGCCAAGCCCTGCAGGGTC +
Preference number: 5 (lower is better)
Translates to: AGSCVRSDGARRRKHAQTRNMQR*AKPCRV
Trigger: GACCCTGCAGGGCTTGGCCAACCGCTGCATGTTCCT...TGTCTGCGCATGTTTCCTCCTCCTAGCTCCATCACTGCGCACACAGCTGCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CAA 90 bp TTAAGCCACACTCGGTGGTTCTGCCGCCCAGGGCAGGGGTGGACTGTAGGCTCCTCTTGGGCCACAAATTaGGCCAGTGCCAGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: LSHTRWFCRPGQGWTVGSSWATN*ASASFS
Trigger: GGAGAAGCTGGCACTGGCCAAATTTGTGGCCCAAGA...GGAGCCTACAGTCCACCCCTGCCCTGGGCGGCAGAACCACCGAGTGTGGCTTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CAA 90 bp GATGGAGCTAGGAGGAGGAAACATGCGCAGACACCCCGTGTTCCCGCTTCCCCATGGGGGATGACCCCTTaGGACACAGCCTGGCAGAGA +
Preference number: 5 (lower is better)
Translates to: DGARRRKHAQTPRVPASPWGMTP*DTAWQR
Trigger: TCTCTGCCAGGCTGTGTCCAAAGGGGTCATCCCCCA...TGGGGAAGCGGGAACACGGGGTGTCTGCGCATGTTTCCTCCTCCTAGCTCCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CAA 90 bp CGGACCCTCTGCCCCCAGCGACCTCCATTCGCTACCTGTCGGGCAGGATGCCCAGCCCTCCTGGTTCTTTaGTTCGTCCTTAGATGGATG +
Preference number: 5 (lower is better)
Translates to: RTLCPQRPPFATCRAGCPALLVL*FVLRWM
Trigger: CATCCATCTAAGGACGAACAAAAGAACCAGGAGGGC...TGGGCATCCTGCCCGACAGGTAGCGAATGGAGGTCGCTGGGGGCAGAGGGTCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CAA 90 bp CAGTCAGAAGATGTCAACATGGATGCCAGGCTGGTGGGCTCCGCCCTTCTCCAACCCCATCCACCCCCTTaGCTCCTCGGTGCTACAGGC +
Preference number: 5 (lower is better)
Translates to: QSEDVNMDARLVGSALLQPHPPP*LLGATG
Trigger: GCCTGTAGCACCGAGGAGCAAAGGGGGTGGATGGGG...TTGGAGAAGGGCGGAGCCCACCAGCCTGGCATCCATGTTGACATCTTCTGACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS GCA 90 bp CCAGAGGAGAGGTCTTGCAGTCCGTACAGCAGGGCGTGGTCCAGGTaGTCACACAGACGCTGTAGGACCTTGTCATGGTTCCGGATGGCA +
Preference number: 5 (lower is better)
Translates to: PEERSCSPYSRAWSR*SHRRCRTLSWFRMA
Trigger: TGCCATCCGGAACCATGACAAGGTCCTACAGCGTCTGTGTGAGCACCTGGACCACGCCCTGCTGTACGGACTGCAAGACCTCTCCTCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS CCA 90 bp GGGCTACTAGGAACATGCAGCGGTTGGCCAAGCCCTGCAGGGTCATaGTGGCCGCCACCTGATGTAACAGTGCTTGGACTCTCGACGGTA +
Preference number: 5 (lower is better)
Translates to: GLLGTCSGWPSPAGS*WPPPDVTVLGLSTV
Trigger: TACCGTCGAGAGTCCAAGCACTGTTACATCAGGTGGCGGCCACCATGACCCTGCAGGGCTTGGCCAACCGCTGCATGTTCCTAGTAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CAA 90 bp CTCGGTGCCACTCGGCAGAAATTCTGCAGACTGAGGCGGAGGCCCGGGAGGAGGACGGAGTTGAAAGAGTaGAGGGACAGACTGTCTGAG +
Preference number: 5 (lower is better)
Translates to: LGATRQKFCRLRRRPGRRTELKE*RDRLSE
Trigger: CTCAGACAGTCTGTCCCTCAACTCTTTCAACTCCGT...CCTCCTCCCGGGCCTCCGCCTCAGTCTGCAGAATTTCTGCCGAGTGGCACCGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CAA 90 bp CTTCCCCAGGAGGCTCTTGACGAAACTCTAGGGAAGGGCCTGGCTCCAGCCAAGTCATCCCACTCCAGGTaGGTGGAGGTGACGGAGTTG +
Preference number: 5 (lower is better)
Translates to: LPQEALDETLGKGLAPAKSSHSR*VEVTEL
Trigger: CAACTCCGTCACCTCCACCAACCTGGAGTGGGATGA...CTTGGCTGGAGCCAGGCCCTTCCCTAGAGTTTCGTCAAGAGCCTCCTGGGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CAA 90 bp CAGAGCCCACAGGGCTCGGACCCTCTGCCCCCAGCGACCTCCATTCGCTACCTGCCAATTTTCTTCTTCTaGGTGACCCTGATGACCTCG +
Preference number: 5 (lower is better)
Translates to: QSPQGSDPLPPATSIRYLPIFFF*VTLMTS
Trigger: CGAGGTCATCAGGGTCACCAAGAAGAAGAAAATTGG...CAGGTAGCGAATGGAGGTCGCTGGGGGCAGAGGGTCCGAGCCCTGTGGGCTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CAA 90 bp CAGGCAGCTGTGTGCGCAGTGATGGAGCTAGGAGGAGGAAACATGCGCAGACACAGCTGGTCGATAACCTaGCTCAGGGGCTGCCCCAAG +
Preference number: 5 (lower is better)
Translates to: QAAVCAVMELGGGNMRRHSWSIT*LRGCPK
Trigger: CTTGGGGCAGCCCCTGAGCAAGGTTATCGACCAGCT...GTGTCTGCGCATGTTTCCTCCTCCTAGCTCCATCACTGCGCACACAGCTGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CAA 90 bp CCTGGCTCCAGCCAAGCAGGGGACAGTCAGAAGATGTCAACATGGATGCCAGGCGGGTCCAGCTGCCCGTaGAGCTGGTCGATAACCTTG +
Preference number: 5 (lower is better)
Translates to: PGSSQAGDSQKMSTWMPGGSSCP*SWSITL
Trigger: CAAGGTTATCGACCAGCTCAACGGGCAGCTGGACCC...GCCTGGCATCCATGTTGACATCTTCTGACTGTCCCCTGCTTGGCTGGAGCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CAA 90 bp TGTGTGCGCAGTGATGGAGCTAGGAGGAGGAAACATGCGCAGACACCCCGTGTTCTGGGCTGGTCTCGCTaGAGCTGGCAGAGAACCTCC +
Preference number: 5 (lower is better)
Translates to: CVRSDGARRRKHAQTPRVLGWSR*SWQRTS
Trigger: GGAGGTTCTCTGCCAGCTCAAGCGAGACCAGCCCAG...AACACGGGGTGTCTGCGCATGTTTCCTCCTCCTAGCTCCATCACTGCGCACACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CAA 90 bp TGTGTGCGCAGTGATGGAGCTAGGAGGAGGAAACATGCGCAGACACCCCGTGTTTACAGCAGCTGCAGGTaGCCCTCCATGTGCCCGGTG +
Preference number: 5 (lower is better)
Translates to: CVRSDGARRRKHAQTPRVYSSCR*PSMCPV
Trigger: CACCGGGCACATGGAGGGCAACCTGCAGCTGCTGTA...AACACGGGGTGTCTGCGCATGTTTCCTCCTCCTAGCTCCATCACTGCGCACACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CAA 90 bp CGGACCCTCTGCCCCCAGCGACCTCCATTCGCTACCTGTCGGGCAGGATGCCCAGGTTCTCGACAGCCTTaGATCATGGCTGACTTCAAA +
Preference number: 5 (lower is better)
Translates to: RTLCPQRPPFATCRAGCPGSRQP*IMADFK
Trigger: TTTGAAGTCAGCCATGATCAAAGGCTGTCGAGAACC...TGGGCATCCTGCCCGACAGGTAGCGAATGGAGGTCGCTGGGGGCAGAGGGTCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CAA 90 bp ACAGCCGTGACAGTGTGCCTGCCGGCTGGCGTGCCTTCCTTTCCTGCCCACCAGCTCACACTTCGATTCTaGGGCCACAAATTTGGCCAG +
Preference number: 5 (lower is better)
Translates to: TAVTVCLPAGVPSFPAHQLTLRF*GHKFGQ
Trigger: CTGGCCAAATTTGTGGCCCAAGAATCGAAGTGTGAG...CTGGTGGGCAGGAAAGGAAGGCACGCCAGCCGGCAGGCACACTGTCACGGCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CAA 90 bp CCTGGCTCCAGCCAAGCAGGGGACAGTCAGAAGATGTCAACATGGATGCCAGGCTGCAGCATGCCTTCTTaGGTGATGGTGCCCTCGGGG +
Preference number: 5 (lower is better)
Translates to: PGSSQAGDSQKMSTWMPGCSMPS*VMVPSG
Trigger: CCCCGAGGGCACCATCACCAAAGAAGGCATGCTGCA...GCCTGGCATCCATGTTGACATCTTCTGACTGTCCCCTGCTTGGCTGGAGCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CAA 90 bp GTCAGAAGATGTCAACATGGATGCCAGGCTGGTGGGCTCCGCCCTTCTCCAAGCTGGGGGATGACCCCTTaGGACACAGCCTGGCAGAGA +
Preference number: 5 (lower is better)
Translates to: VRRCQHGCQAGGLRPSPSWGMTP*DTAWQR
Trigger: TCTCTGCCAGGCTGTGTCCAAAGGGGTCATCCCCCA...GCTTGGAGAAGGGCGGAGCCCACCAGCCTGGCATCCATGTTGACATCTTCTGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CAA 90 bp CTCCAGCCAAGCAGGGGACAGTCAGAAGATGTCAACATGGATGCCAGGCTGGTGCTGATGTCGCCCAGCTaGGCTGTGCCCAAAGAGCGG +
Preference number: 5 (lower is better)
Translates to: LQPSRGQSEDVNMDARLVLMSPS*AVPKER
Trigger: CCGCTCTTTGGGCACAGCCAAGCTGGGCGACATCAG...CACCAGCCTGGCATCCATGTTGACATCTTCTGACTGTCCCCTGCTTGGCTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS TCA 90 bp ATGCAGCGGTTGGCCAAGCCCTGCAGGGTCATGGTGGCCGCCACCTaGTGTAACAGTGCTTGGACTCTCGACGGTAAAGCGGTAGAAGTC +
Preference number: 5 (lower is better)
Translates to: MQRLAKPCRVMVAAT*CNSAWTLDGKAVEV
Trigger: GACTTCTACCGCTTTACCGTCGAGAGTCCAAGCACTGTTACATCAGGTGGCGGCCACCATGACCCTGCAGGGCTTGGCCAACCGCTGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS CCA 90 bp TTGGCTGTGCCCAAAGAGCGGAAGAAGCTGGTCTGGCAATCCTCATaGCACGTAAAGAGGCGGTCATCCGTGAGGACCAGGCAGCAGGGT +
Preference number: 5 (lower is better)
Translates to: LAVPKERKKLVWQSS*HVKRRSSVRTRQQG
Trigger: ACCCTGCTGCCTGGTCCTCACGGATGACCGCCTCTTTACGTGCCATGAGGATTGCCAGACCAGCTTCTTCCGCTCTTTGGGCACAGCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000477849.1
ENST00000642363.1
CDS CCA 90 bp ATGTCGCCCAGCTTGGCTGTGCCCAAAGAGCGGAAGAAGCTGGTCTaGCAATCCTCATGGCACGTAAAGAGGCGGTCATCCGTGAGGACC +
Preference number: 5 (lower is better)
Translates to: MSPSLAVPKERKKLV*QSSWHVKRRSSVRT
Trigger: GGTCCTCACGGATGACCGCCTCTTTACGTGCCATGAGGATTGCCAGACCAGCTTCTTCCGCTCTTTGGGCACAGCCAAGCTGGGCGACAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000477849.1
ENST00000642363.1
CDS-3UTR CAA 90 bp CCTGGCTCCAGCCAAGCAGGGGACAGTCAGAAGATGTCAACATGGATGCCAGGCTCATCCCACTCCAGGTaGGTGGAGGTGACGGAGTTG +
Preference number: 5 (lower is better)
Translates to: PGSSQAGDSQKMSTWMPGSSHSR*VEVTEL
Trigger: CAACTCCGTCACCTCCACCAACCTGGAGTGGGATGA...GCCTGGCATCCATGTTGACATCTTCTGACTGTCCCCTGCTTGGCTGGAGCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CAA 90 bp CAGTCAGAAGATGTCAACATGGATGCCAGGCTGGTGGGCTCCGCCCTTCTCCAATCCTCCCTCTTCTTCTaGGCCAGCAGCCTCAGGGCT +
Preference number: 5 (lower is better)
Translates to: QSEDVNMDARLVGSALLQSSLFF*ASSLRA
Trigger: AGCCCTGAGGCTGCTGGCCAAGAAGAAGAGGGAGGA...TTGGAGAAGGGCGGAGCCCACCAGCCTGGCATCCATGTTGACATCTTCTGACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CAA 90 bp CGGACCCTCTGCCCCCAGCGACCTCCATTCGCTACCTGTCGGGCAGGATGCCCACTCATCCGGATCATTTaGAACAGCTGCTCTTCGTTT +
Preference number: 5 (lower is better)
Translates to: RTLCPQRPPFATCRAGCPLIRII*NSCSSF
Trigger: AAACGAAGAGCAGCTGTTCAAAATGATCCGGATGAG...TGGGCATCCTGCCCGACAGGTAGCGAATGGAGGTCGCTGGGGGCAGAGGGTCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CAA 90 bp ACAGCCGTGACAGTGTGCCTGCCGGCTGGCGTGCCTTCCTTTCCTGCCCACCAGGGTTCTCGACAGCCTTaGATCATGGCTGACTTCAAA +
Preference number: 5 (lower is better)
Translates to: TAVTVCLPAGVPSFPAHQGSRQP*IMADFK
Trigger: TTTGAAGTCAGCCATGATCAAAGGCTGTCGAGAACC...CTGGTGGGCAGGAAAGGAAGGCACGCCAGCCGGCAGGCACACTGTCACGGCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CAA 90 bp GATGGAGCTAGGAGGAGGAAACATGCGCAGACACCCCGTGTTCCCGCTTCCCCATCTTGGGCCACAAATTaGGCCAGTGCCAGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: DGARRRKHAQTPRVPASPSWATN*ASASFS
Trigger: GGAGAAGCTGGCACTGGCCAAATTTGTGGCCCAAGA...TGGGGAAGCGGGAACACGGGGTGTCTGCGCATGTTTCCTCCTCCTAGCTCCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CAA 90 bp GGTGTTCTCGGTGCCACTCGGCAGAAATTCTGCAGACTGAGGCGGAGGCCCGGGTCGAATTTCTTCTTGTaGGAGGCTTCCTGGATCGCC +
Preference number: 5 (lower is better)
Translates to: GVLGATRQKFCRLRRRPGSNFFL*EASWIA
Trigger: GGCGATCCAGGAAGCCTCCAACAAGAAGAAATTCGA...CCCGGGCCTCCGCCTCAGTCTGCAGAATTTCTGCCGAGTGGCACCGAGAACACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS TCA 90 bp GTTGGTGGAGGTGACGGAGTTGAAAGAGTTGAGGGACAGACTGTCTaGGCCGTGGACCGAGCTGGGAAGGCGGTCTTCAAAGTCCAGCAG +
Preference number: 5 (lower is better)
Translates to: VGGGDGVERVEGQTV*AVDRAGKAVFKVQQ
Trigger: CTGCTGGACTTTGAAGACCGCCTTCCCAGCTCGGTCCACGGCTCAGACAGTCTGTCCCTCAACTCTTTCAACTCCGTCACCTCCACCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS CCA 90 bp CTACTAGGAACATGCAGCGGTTGGCCAAGCCCTGCAGGGTCATGGTaGCCGCCACCTGATGTAACAGTGCTTGGACTCTCGACGGTAAAG +
Preference number: 5 (lower is better)
Translates to: LLGTCSGWPSPAGSW*PPPDVTVLGLSTVK
Trigger: CTTTACCGTCGAGAGTCCAAGCACTGTTACATCAGGTGGCGGCCACCATGACCCTGCAGGGCTTGGCCAACCGCTGCATGTTCCTAGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CAA 90 bp CTTCCCCAGGAGGCTCTTGACGAAACTCTAGGGAAGGGCCTGGCTCCAGCCAAGGTGGAGGTGACGGAGTaGAAAGAGTTGAGGGACAGA +
Preference number: 5 (lower is better)
Translates to: LPQEALDETLGKGLAPAKVEVTE*KELRDR
Trigger: TCTGTCCCTCAACTCTTTCAACTCCGTCACCTCCAC...CTTGGCTGGAGCCAGGCCCTTCCCTAGAGTTTCGTCAAGAGCCTCCTGGGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CAA 90 bp TGTTCGTCCTTAGATGGATGGTGTTCTCGGTGCCACTCGGCAGAAATTCTGCAGCTCCTGGTGGAGGCCTaGCTGCTGGTCAGGTCGGAG +
Preference number: 5 (lower is better)
Translates to: CSSLDGWCSRCHSAEILQLLVEA*LLVRSE
Trigger: CTCCGACCTGACCAGCAGCAAGGCCTCCACCAGGAG...CTGCAGAATTTCTGCCGAGTGGCACCGAGAACACCATCCATCTAAGGACGAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CAA 90 bp CCACCCCCTTTGCTCCTCGGTGCTACAGGCACTGCCGGGTTGAGGGGACAGGCACTCATCCGGATCATTTaGAACAGCTGCTCTTCGTTT +
Preference number: 5 (lower is better)
Translates to: PPPLLLGATGTAGLRGQALIRII*NSCSSF
Trigger: AAACGAAGAGCAGCTGTTCAAAATGATCCGGATGAG...TGCCTGTCCCCTCAACCCGGCAGTGCCTGTAGCACCGAGGAGCAAAGGGGGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CAA 90 bp CAGTCAGAAGATGTCAACATGGATGCCAGGCTGGTGGGCTCCGCCCTTCTCCAAAACTGCTTCCTGCGGTaGGTGCACACCAGCTTCACC +
Preference number: 5 (lower is better)
Translates to: QSEDVNMDARLVGSALLQNCFLR*VHTSFT
Trigger: GGTGAAGCTGGTGTGCACCAACCGCAGGAAGCAGTT...TTGGAGAAGGGCGGAGCCCACCAGCCTGGCATCCATGTTGACATCTTCTGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CAA 90 bp GCCGGGCACCTGATCTGGATCCCTGGAGTGGAGGGACCCTGTCTTAAGCCACACTCGAATTTCTTCTTGTaGGAGGCTTCCTGGATCGCC +
Preference number: 5 (lower is better)
Translates to: AGHLIWIPGVEGPCLKPHSNFFL*EASWIA
Trigger: GGCGATCCAGGAAGCCTCCAACAAGAAGAAATTCGA...GTGTGGCTTAAGACAGGGTCCCTCCACTCCAGGGATCCAGATCAGGTGCCCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CAA 90 bp AACAGCCGTGACAGTGTGCCTGCCGGCTGGCGTGCCTTCCTTTCCTGCCCACCATCCTCGAATTTCTTCTaGTTGGAGGCTTCCTGGATC +
Preference number: 5 (lower is better)
Translates to: NSRDSVPAGWRAFLSCPPSSNFF*LEASWI
Trigger: GATCCAGGAAGCCTCCAACAAGAAGAAATTCGAGGA...TGGTGGGCAGGAAAGGAAGGCACGCCAGCCGGCAGGCACACTGTCACGGCTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS GCA 90 bp AAAAAGAACTCAGCCAGCGCCACATCAGCCGTGTCCAGCAGAAACTaGTTCCTGCGGTTGGTGCACACCAGCTTCACCGTCTGCTGGTCA +
Preference number: 5 (lower is better)
Translates to: KKNSASATSAVSSRN*FLRLVHTSFTVCWS
Trigger: TGACCAGCAGACGGTGAAGCTGGTGTGCACCAACCGCAGGAAGCAGTTTCTGCTGGACACGGCTGATGTGGCGCTGGCTGAGTTCTTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS GCA 90 bp AGCAGATGCCTCACACTTCGATTCTTGGGCCACAAATTTGGCCAGTaGCAGCTTCTCCATGGTGGCATCCGTCAGGATGCTGGGGTAGGG +
Preference number: 5 (lower is better)
Translates to: SRCLTLRFLGHKFGQ*QLLHGGIRQDAGVG
Trigger: CCCTACCCCAGCATCCTGACGGATGCCACCATGGAGAAGCTGGCACTGGCCAAATTTGTGGCCCAAGAATCGAAGTGTGAGGCATCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000477849.1
ENST00000642363.1
CDS CCA 90 bp ACTTCGATTCTTGGGCCACAAATTTGGCCAGTGCCAGCTTCTCCATaGTGGCATCCGTCAGGATGCTGGGGTAGGGAGGTTCTCGACAGC +
Preference number: 5 (lower is better)
Translates to: TSILGPQIWPVPASP*WHPSGCWGREVLDS
Trigger: GCTGTCGAGAACCTCCCTACCCCAGCATCCTGACGGATGCCACCATGGAGAAGCTGGCACTGGCCAAATTTGTGGCCCAAGAATCGAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CAA 90 bp GATGGAGCTAGGAGGAGGAAACATGCGCAGACACCCCGTGTTCCCGCTTCCCCAACGGAGTTGAAAGAGTaGAGGGACAGACTGTCTGAG +
Preference number: 5 (lower is better)
Translates to: DGARRRKHAQTPRVPASPTELKE*RDRLSE
Trigger: CTCAGACAGTCTGTCCCTCAACTCTTTCAACTCCGT...TGGGGAAGCGGGAACACGGGGTGTCTGCGCATGTTTCCTCCTCCTAGCTCCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CAA 90 bp CTCCTGGTTCTTTTGTTCGTCCTTAGATGGATGGTGTTCTCGGTGCCACTCGGCCGGGGTGGAGTGGACTaGCCTCCTCATCTGATCTGC +
Preference number: 5 (lower is better)
Translates to: LLVLLFVLRWMVFSVPLGRGGVD*PPHLIC
Trigger: GCAGATCAGATGAGGAGGCAAGTCCACTCCACCCCG...GCCGAGTGGCACCGAGAACACCATCCATCTAAGGACGAACAAAAGAACCAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375793.2
ENST00000375799.8
CDS-3UTR CAA 90 bp CCGCCCTCCTGGTTCTTTTGTTCGTCCTTAGATGGATGGTGTTCTCGGTGCCACAACTGCTTCCTGCGGTaGGTGCACACCAGCTTCACC +
Preference number: 5 (lower is better)
Translates to: PPSWFFCSSLDGWCSRCHNCFLR*VHTSFT
Trigger: GGTGAAGCTGGTGTGCACCAACCGCAGGAAGCAGTT...GTGGCACCGAGAACACCATCCATCTAAGGACGAACAAAAGAACCAGGAGGGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS GCA 90 bp CAGTCTGTGAGCAGCACGTACAGCAGCTGCAGGTTGCCCTCCATGTaGCCGGTGCTCATCCGGATCATTTTGAACAGCTGCTCTTCGTTT +
Preference number: 5 (lower is better)
Translates to: QSVSSTYSSCRLPSM*PVLIRIILNSCSSF
Trigger: AAACGAAGAGCAGCTGTTCAAAATGATCCGGATGAGCACCGGGCACATGGAGGGCAACCTGCAGCTGCTGTACGTGCTGCTCACAGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CAA 90 bp CCGCCCTCCTGGTTCTTTTGTTCGTCCTTAGATGGATGGTGTTCTCGGTGCCACAGACGCTGTAGGACCTaGTCATGGTTCCGGATGGCA +
Preference number: 5 (lower is better)
Translates to: PPSWFFCSSLDGWCSRCHRRCRT*SWFRMA
Trigger: TGCCATCCGGAACCATGACAAGGTCCTACAGCGTCT...GTGGCACCGAGAACACCATCCATCTAAGGACGAACAAAAGAACCAGGAGGGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CAA 90 bp CTCCTGGTTCTTTTGTTCGTCCTTAGATGGATGGTGTTCTCGGTGCCACTCGGCTCCAAGGAGTTCTCGTaGAGGGCCAGGTACAGCCAG +
Preference number: 5 (lower is better)
Translates to: LLVLLFVLRWMVFSVPLGSKEFS*RARYSQ
Trigger: CTGGCTGTACCTGGCCCTCAACGAGAACTCCTTGGA...GCCGAGTGGCACCGAGAACACCATCCATCTAAGGACGAACAAAAGAACCAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CAA 90 bp GCAGTGATGGAGCTAGGAGGAGGAAACATGCGCAGACACCCCGTGTTCCCGCTTACGGAGTTGAAAGAGTaGAGGGACAGACTGTCTGAG +
Preference number: 5 (lower is better)
Translates to: AVMELGGGNMRRHPVFPLTELKE*RDRLSE
Trigger: CTCAGACAGTCTGTCCCTCAACTCTTTCAACTCCGT...AAGCGGGAACACGGGGTGTCTGCGCATGTTTCCTCCTCCTAGCTCCATCACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CAA 90 bp CTCCAGCCAAGCAGGGGACAGTCAGAAGATGTCAACATGGATGCCAGGCTGGTGGTGGAGGTGACGGAGTaGAAAGAGTTGAGGGACAGA +
Preference number: 5 (lower is better)
Translates to: LQPSRGQSEDVNMDARLVVEVTE*KELRDR
Trigger: TCTGTCCCTCAACTCTTTCAACTCCGTCACCTCCAC...CACCAGCCTGGCATCCATGTTGACATCTTCTGACTGTCCCCTGCTTGGCTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CAA 90 bp CAGTCAGAAGATGTCAACATGGATGCCAGGCTGGTGGGCTCCGCCCTTCTCCAAGTGGAGGTGACGGAGTaGAAAGAGTTGAGGGACAGA +
Preference number: 5 (lower is better)
Translates to: QSEDVNMDARLVGSALLQVEVTE*KELRDR
Trigger: TCTGTCCCTCAACTCTTTCAACTCCGTCACCTCCAC...TTGGAGAAGGGCGGAGCCCACCAGCCTGGCATCCATGTTGACATCTTCTGACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CAA 90 bp TGTTCGTCCTTAGATGGATGGTGTTCTCGGTGCCACTCGGCAGAAATTCTGCAGTCCTCCCTCTTCTTCTaGGCCAGCAGCCTCAGGGCT +
Preference number: 5 (lower is better)
Translates to: CSSLDGWCSRCHSAEILQSSLFF*ASSLRA
Trigger: AGCCCTGAGGCTGCTGGCCAAGAAGAAGAGGGAGGA...CTGCAGAATTTCTGCCGAGTGGCACCGAGAACACCATCCATCTAAGGACGAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CAA 90 bp GCAGTGATGGAGCTAGGAGGAGGAAACATGCGCAGACACCCCGTGTTCCCGCTTCTCACACTTCGATTCTaGGGCCACAAATTTGGCCAG +
Preference number: 5 (lower is better)
Translates to: AVMELGGGNMRRHPVFPLLTLRF*GHKFGQ
Trigger: CTGGCCAAATTTGTGGCCCAAGAATCGAAGTGTGAG...AAGCGGGAACACGGGGTGTCTGCGCATGTTTCCTCCTCCTAGCTCCATCACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CAA 90 bp CAGGCAGCTGTGTGCGCAGTGATGGAGCTAGGAGGAGGAAACATGCGCAGACACGCCCTCCTGGTTCTTTaGTTCGTCCTTAGATGGATG +
Preference number: 5 (lower is better)
Translates to: QAAVCAVMELGGGNMRRHALLVL*FVLRWM
Trigger: CATCCATCTAAGGACGAACAAAAGAACCAGGAGGGC...GTGTCTGCGCATGTTTCCTCCTCCTAGCTCCATCACTGCGCACACAGCTGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CAA 90 bp TCTGGCGAGGCAGGCAGCTGTGTGCGCAGTGATGGAGCTAGGAGGAGGAAACATGCCCTCCTGGTTCTTTaGTTCGTCCTTAGATGGATG +
Preference number: 5 (lower is better)
Translates to: SGEAGSCVRSDGARRRKHALLVL*FVLRWM
Trigger: CATCCATCTAAGGACGAACAAAAGAACCAGGAGGGC...ATGTTTCCTCCTCCTAGCTCCATCACTGCGCACACAGCTGCCTGCCTCGCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CAA 90 bp TCTGGCGAGGCAGGCAGCTGTGTGCGCAGTGATGGAGCTAGGAGGAGGAAACATCCAATTTTCTTCTTCTaGGTGACCCTGATGACCTCG +
Preference number: 5 (lower is better)
Translates to: SGEAGSCVRSDGARRRKHPIFFF*VTLMTS
Trigger: CGAGGTCATCAGGGTCACCAAGAAGAAGAAAATTGG...ATGTTTCCTCCTCCTAGCTCCATCACTGCGCACACAGCTGCCTGCCTCGCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CAA 90 bp CCTGGCTCCAGCCAAGCAGGGGACAGTCAGAAGATGTCAACATGGATGCCAGGCCCAATTTTCTTCTTCTaGGTGACCCTGATGACCTCG +
Preference number: 5 (lower is better)
Translates to: PGSSQAGDSQKMSTWMPGPIFFF*VTLMTS
Trigger: CGAGGTCATCAGGGTCACCAAGAAGAAGAAAATTGG...GCCTGGCATCCATGTTGACATCTTCTGACTGTCCCCTGCTTGGCTGGAGCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CAA 90 bp TGTGTGCGCAGTGATGGAGCTAGGAGGAGGAAACATGCGCAGACACCCCGTGTTTCGAATTTCTTCTTGTaGGAGGCTTCCTGGATCGCC +
Preference number: 5 (lower is better)
Translates to: CVRSDGARRRKHAQTPRVSNFFL*EASWIA
Trigger: GGCGATCCAGGAAGCCTCCAACAAGAAGAAATTCGA...AACACGGGGTGTCTGCGCATGTTTCCTCCTCCTAGCTCCATCACTGCGCACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS GCA 90 bp GTGGGGGAGGTCCACCTGATAGATGGTTTTCCACCCAGAGTTCAGTaGAGACAGCAATCGGTCCAGTTCAGAAGTGCAGCTCAGGTAGAT +
Preference number: 5 (lower is better)
Translates to: VGEVHLIDGFPPRVQ*RQQSVQFRSAAQVD
Trigger: ATCTACCTGAGCTGCACTTCTGAACTGGACCGATTGCTGTCTGCACTGAACTCTGGGTGGAAAACCATCTATCAGGTGGACCTCCCCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000477849.1
ENST00000642363.1
CDS CCA 90 bp CCAGGTGCTCACACAGACGCTGTAGGACCTTGTCATGGTTCCGGATaGCAGGGATCTCATCCTCACATGCAGCAAAATAGCTCTGCAACT +
Preference number: 5 (lower is better)
Translates to: PGAHTDAVGPCHGSG*QGSHPHMQQNSSAT
Trigger: AGTTGCAGAGCTATTTTGCTGCATGTGAGGATGAGATCCCTGCCATCCGGAACCATGACAAGGTCCTACAGCGTCTGTGTGAGCACCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000462455.1
ENST00000642363.1
CDS-3UTR CAA 90 bp CAGTCAGAAGATGTCAACATGGATGCCAGGCTGGTGGGCTCCGCCCTTCTCCAACTCATCCGGATCATTTaGAACAGCTGCTCTTCGTTT +
Preference number: 5 (lower is better)
Translates to: QSEDVNMDARLVGSALLQLIRII*NSCSSF
Trigger: AAACGAAGAGCAGCTGTTCAAAATGATCCGGATGAG...TTGGAGAAGGGCGGAGCCCACCAGCCTGGCATCCATGTTGACATCTTCTGACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CAA 90 bp CTCCTGGTTCTTTTGTTCGTCCTTAGATGGATGGTGTTCTCGGTGCCACTCGGCCTCACACTTCGATTCTaGGGCCACAAATTTGGCCAG +
Preference number: 5 (lower is better)
Translates to: LLVLLFVLRWMVFSVPLGLTLRF*GHKFGQ
Trigger: CTGGCCAAATTTGTGGCCCAAGAATCGAAGTGTGAG...GCCGAGTGGCACCGAGAACACCATCCATCTAAGGACGAACAAAAGAACCAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS GCA 90 bp TGTGAGGTCTCCATCTTCCCAGTCTGTGCTGGGTACAGACGGCACTaGTGGAAACACATCTCCAAAATCATAATCCTCACTAGATGGGGC +
Preference number: 5 (lower is better)
Translates to: CEVSIFPVCAGYRRH*WKHISKIIILTRWG
Trigger: GCCCCATCTAGTGAGGATTATGATTTTGGAGATGTGTTTCCAGCAGTGCCGTCTGTACCCAGCACAGACTGGGAAGATGGAGACCTCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CAA 90 bp CTCCTGGTTCTTTTGTTCGTCCTTAGATGGATGGTGTTCTCGGTGCCACTCGGCGGTTCTCGACAGCCTTaGATCATGGCTGACTTCAAA +
Preference number: 5 (lower is better)
Translates to: LLVLLFVLRWMVFSVPLGGSRQP*IMADFK
Trigger: TTTGAAGTCAGCCATGATCAAAGGCTGTCGAGAACC...GCCGAGTGGCACCGAGAACACCATCCATCTAAGGACGAACAAAAGAACCAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CAA 90 bp CTCCTGGTTCTTTTGTTCGTCCTTAGATGGATGGTGTTCTCGGTGCCACTCGGCTCCTCGAATTTCTTCTaGTTGGAGGCTTCCTGGATC +
Preference number: 5 (lower is better)
Translates to: LLVLLFVLRWMVFSVPLGSSNFF*LEASWI
Trigger: GATCCAGGAAGCCTCCAACAAGAAGAAATTCGAGGA...GCCGAGTGGCACCGAGAACACCATCCATCTAAGGACGAACAAAAGAACCAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS CCA 90 bp GAGGTCTCCATCTTCCCAGTCTGTGCTGGGTACAGACGGCACTGCTaGAAACACATCTCCAAAATCATAATCCTCACTAGATGGGGCAAT +
Preference number: 5 (lower is better)
Translates to: EVSIFPVCAGYRRHC*KHISKIIILTRWGN
Trigger: ATTGCCCCATCTAGTGAGGATTATGATTTTGGAGATGTGTTTCCAGCAGTGCCGTCTGTACCCAGCACAGACTGGGAAGATGGAGACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375799.8
ENST00000642363.1
CDS-3UTR CAA 90 bp TGTTCGTCCTTAGATGGATGGTGTTCTCGGTGCCACTCGGCAGAAATTCTGCAGTCCTCGAATTTCTTCTaGTTGGAGGCTTCCTGGATC +
Preference number: 5 (lower is better)
Translates to: CSSLDGWCSRCHSAEILQSSNFF*LEASWI
Trigger: GATCCAGGAAGCCTCCAACAAGAAGAAATTCGAGGA...CTGCAGAATTTCTGCCGAGTGGCACCGAGAACACCATCCATCTAAGGACGAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS GCA 72 bp TCTCAGGGATCAGCAGGCCCGGCTCGGAGCGCTCGCTaGTCTCCGTGGTGCTGCTCGGCCCCTCTCCCTCCT +
Preference number: 6 (lower is better)
Translates to: SQGSAGPARSAR*SPWCCSAPLPP
Trigger: AGGAGGGAGAGGGGCCGAGCAGCACCACGGAGAGCAGCGAGCGCTCCGAGCCGGGCCTGCTGATCCCTGAGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS GCA 72 bp CGGGAGGCTCGGCCGCGGCAGAGACTGTCGCTCCGCTaGCAGGCGCTGTGGATGAGGCTCAAGGCATCCTCG +
Preference number: 6 (lower is better)
Translates to: REARPRQRLSLR*QALWMRLKASS
Trigger: CGAGGATGCCTTGAGCCTCATCCACAGCGCCTGGCAGCGGAGCGACAGTCTCTGCCGCGGCCGAGCCTCCCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000477849.1
ENST00000642363.1
CDS CAA 72 bp GGGTTCTGGCGCTGGGTGGGGCTCCTGGTGGAGGCCTaGCTGCTGGTCAGGTCGGAGGCTGTGGAGCGGGGA +
Preference number: 6 (lower is better)
Translates to: GFWRWVGLLVEA*LLVRSEAVERG
Trigger: TCCCCGCTCCACAGCCTCCGACCTGACCAGCAGCAAGGCCTCCACCAGGAGCCCCACCCAGCGCCAGAACCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS CCA 72 bp AGCAGTGGCAGGGCGTGGGGCCCAGGGACTCGTCTGTaGGGTCCTCCCAGTGCACAAGGCCGTAGAAGCGCA +
Preference number: 6 (lower is better)
Translates to: SSGRAWGPGTRL*GPPSAQGRRSA
Trigger: TGCGCTTCTACGGCCTTGTGCACTGGGAGGACCCCACAGACGAGTCCCTGGGCCCCACGCCCTGCCACTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000477849.1
ENST00000642363.1
CDS CCA 72 bp AGGCAGGGCCGGTCGGAGAGAATGACCTGGAAGGCGTaGGGCCGATCCGTGGTGTTGGCTCTCCGGCAGCCA +
Preference number: 6 (lower is better)
Translates to: RQGRSERMTWKA*GRSVVLALRQP
Trigger: TGGCTGCCGGAGAGCCAACACCACGGATCGGCCCCACGCCTTCCAGGTCATTCTCTCCGACCGGCCCTGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS TCA 72 bp CGGCACTTAGCTCCAGGCAGGGCCGGTCGGAGAGAATaGCCTGGAAGGCGTGGGGCCGATCCGTGGTGTTGG +
Preference number: 6 (lower is better)
Translates to: RHLAPGRAGRRE*PGRRGADPWCW
Trigger: CCAACACCACGGATCGGCCCCACGCCTTCCAGGTCATTCTCTCCGACCGGCCCTGCCTGGAGCTAAGTGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS TCA 72 bp CGCAGTACTCCTTGCCCGGCTCGGTGGAGACGGCGCTaGTGTCGCCCAGCTTGGCTGTGCCCAAAGAGCGGA +
Preference number: 6 (lower is better)
Translates to: RSTPCPARWRRR*CRPAWLCPKSG
Trigger: TCCGCTCTTTGGGCACAGCCAAGCTGGGCGACATCAGCGCCGTCTCCACCGAGCCGGGCAAGGAGTACTGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000477849.1
ENST00000642363.1
CDS GCA 72 bp CAGGCACGGCTGCGCCCCAGGTTGGTGGCCACGTGCTaGAGCACCTCGATCTGCTTGATGGCCTCTCTCCGA +
Preference number: 6 (lower is better)
Translates to: QARLRPRLVATC*STSICLMASLR
Trigger: TCGGAGAGAGGCCATCAAGCAGATCGAGGTGCTGCAGCACGTGGCCACCAACCTGGGGCGCAGCCGTGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS GCA 72 bp AGCCAGGCACGGCTGCGCCCCAGGTTGGTGGCCACGTaGTGCAGCACCTCGATCTGCTTGATGGCCTCTCTC +
Preference number: 6 (lower is better)
Translates to: SQARLRPRLVAT*CSTSICLMASL
Trigger: GAGAGAGGCCATCAAGCAGATCGAGGTGCTGCAGCACGTGGCCACCAACCTGGGGCGCAGCCGTGCCTGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS GCA 72 bp GACAGTGTGCCTGCCGGCTGGCGTGCCTTCCTTTCCTaGCCACCAGGGACGCCAACCAGCTCTGCCTCAGCA +
Preference number: 6 (lower is better)
Translates to: DSVPAGWRAFLS*PPGTPTSSASA
Trigger: TGCTGAGGCAGAGCTGGTTGGCGTCCCTGGTGGGCAGGAAAGGAAGGCACGCCAGCCGGCAGGCACACTGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000477849.1
ENST00000642363.1
CDS CCA 72 bp GACACAGTCTCTGCCGGCTCCTCGTTGAAGGGGTTCTaGCGCTGGGTGGGGCTCCTGGTGGAGGCCTTGCTG +
Preference number: 6 (lower is better)
Translates to: DTVSAGSSLKGF*RWVGLLVEALL
Trigger: CAGCAAGGCCTCCACCAGGAGCCCCACCCAGCGCCAGAACCCCTTCAACGAGGAGCCGGCAGAGACTGTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS CCA 72 bp GGCAAGCATAGTGTCTGGCGAGTCCCGCCCAAGGCTTaGGCTGCCGTTGCGGCTGTCACCGTCCCCCTGCTT +
Preference number: 6 (lower is better)
Translates to: GKHSVWRVPPKA*AAVAAVTVPLL
Trigger: AAGCAGGGGGACGGTGACAGCCGCAACGGCAGCCCAAGCCTTGGGCGGGACTCGCCAGACACTATGCTTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375793.2
ENST00000375799.8
CDS CAA 72 bp GTGTCTGGCGAGTCCCGCCCAAGGCTTGGGCTGCCGTaGCGGCTGTCACCGTCCCCCTGCTTGGCACATTTC +
Preference number: 6 (lower is better)
Translates to: VSGESRPRLGLP*RLSPSPCLAHF
Trigger: GAAATGTGCCAAGCAGGGGGACGGTGACAGCCGCAACGGCAGCCCAAGCCTTGGGCGGGACTCGCCAGACAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375793.2
ENST00000375799.8
CDS CAA 72 bp CCCGGCTCGGTGGAGACGGCGCTGATGTCGCCCAGCTaGGCTGTGCCCAAAGAGCGGAAGAAGCTGGTCTGG +
Preference number: 6 (lower is better)
Translates to: PGSVETALMSPS*AVPKERKKLVW
Trigger: CCAGACCAGCTTCTTCCGCTCTTTGGGCACAGCCAAGCTGGGCGACATCAGCGCCGTCTCCACCGAGCCGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000477849.1
ENST00000642363.1
CDS GCA 72 bp TGTCTGGCGAGTCCCGCCCAAGGCTTGGGCTGCCGTTaGGGCTGTCACCGTCCCCCTGCTTGGCACATTTCT +
Preference number: 6 (lower is better)
Translates to: CLASPAQGLGCR*GCHRPPAWHIS
Trigger: AGAAATGTGCCAAGCAGGGGGACGGTGACAGCCGCAACGGCAGCCCAAGCCTTGGGCGGGACTCGCCAGACA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375793.2
ENST00000375799.8
CDS CCA 72 bp TTGGGCTGCCGTTGCGGCTGTCACCGTCCCCCTGCTTaGCACATTTCTTCTGGCTGCAGGCGGGGTGGAGTG +
Preference number: 6 (lower is better)
Translates to: LGCRCGCHRPPA*HISSGCRRGGV
Trigger: CACTCCACCCCGCCTGCAGCCAGAAGAAATGTGCCAAGCAGGGGGACGGTGACAGCCGCAACGGCAGCCCAA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375793.2
ENST00000375799.8
CDS CCA 72 bp CCAGCAGCCTCAGGGCTACTAGGAACATGCAGCGGTTaGCCAAGCCCTGCAGGGTCATGGTGGCCGCCACCT +
Preference number: 6 (lower is better)
Translates to: PAASGLLGTCSG*PSPAGSWWPPP
Trigger: AGGTGGCGGCCACCATGACCCTGCAGGGCTTGGCCAACCGCTGCATGTTCCTAGTAGCCCTGAGGCTGCTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS CCA 72 bp CTTAGCTCCAGGCAGGGCCGGTCGGAGAGAATGACCTaGAAGGCGTGGGGCCGATCCGTGGTGTTGGCTCTC +
Preference number: 6 (lower is better)
Translates to: LSSRQGRSERMT*KAWGRSVVLAL
Trigger: GAGAGCCAACACCACGGATCGGCCCCACGCCTTCCAGGTCATTCTCTCCGACCGGCCCTGCCTGGAGCTAAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS CCA 72 bp GCTACGCCCTGGGGGATGACCCCTTTGGACACAGCCTaGCAGAGATGCTGCATCCACTCGGCCATCTCGGCC +
Preference number: 6 (lower is better)
Translates to: ATPWGMTPLDTA*QRCCIHSAISA
Trigger: GGCCGAGATGGCCGAGTGGATGCAGCATCTCTGCCAGGCTGTGTCCAAAGGGGTCATCCCCCAGGGCGTAGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000477849.1
ENST00000642363.1
CDS CCA 72 bp CCAGGTACAGCCAGGCACGGCCCGTACAGCAGGGCGTaGTCCAGGTGCTCACACAGACGCTGTAGGACCTTG +
Preference number: 6 (lower is better)
Translates to: PGTARHGPYSRA*SRCSHRRCRTL
Trigger: CAAGGTCCTACAGCGTCTGTGTGAGCACCTGGACCACGCCCTGCTGTACGGGCCGTGCCTGGCTGTACCTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462455.1
CDS CAA 72 bp TGGCTGTCCTGGGAGAACTCCAAGACGCAGTACTCCTaGCCCGGCTCGGTGGAGACGGCGCTGATGTCGCCC +
Preference number: 6 (lower is better)
Translates to: WLSWENSKTQYS*PGSVETALMSP
Trigger: GGGCGACATCAGCGCCGTCTCCACCGAGCCGGGCAAGGAGTACTGCGTCTTGGAGTTCTCCCAGGACAGCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000477849.1
ENST00000642363.1
CDS TCA 72 bp GGAACAACCGCAGGTAGCTCTCCAAGGAGTTCTCGTTaGGGGCCAGGTACAGCCAGGCACGGCTGCGCCCCA +
Preference number: 6 (lower is better)
Translates to: GTTAGSSPRSSR*GPGTARHGCAP
Trigger: TGGGGCGCAGCCGTGCCTGGCTGTACCTGGCCCTCAACGAGAACTCCTTGGAGAGCTACCTGCGGTTGTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS GCA 72 bp TGGGGGATGACCCCTTTGGACACAGCCTGGCAGAGATaGTGCATCCACTCGGCCATCTCGGCCTCGCTCTCG +
Preference number: 6 (lower is better)
Translates to: WGMTPLDTAWQR*CIHSAISASLS
Trigger: CGAGAGCGAGGCCGAGATGGCCGAGTGGATGCAGCATCTCTGCCAGGCTGTGTCCAAAGGGGTCATCCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000477849.1
ENST00000642363.1
CDS GCA 72 bp GCCAGGCACGGCCCGTACAGCAGGGCGTGGTCCAGGTaGTCACACAGACGCTGTAGGACCTTGTCATGGTTC +
Preference number: 6 (lower is better)
Translates to: ARHGPYSRAWSR*SHRRCRTLSWF
Trigger: GAACCATGACAAGGTCCTACAGCGTCTGTGTGAGCACCTGGACCACGCCCTGCTGTACGGGCCGTGCCTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462455.1
CDS CAA 90 bp GCAAGCATAGTGTCTGGCGAGTCCCGCCCAAGGCTTGGGCTGCCGTaGCGGCTGTCACCGTCCCCCTGCTTGGCACATTTCTTCTGGCTG +
Preference number: 6 (lower is better)
Translates to: ASIVSGESRPRLGLP*RLSPSPCLAHFFWL
Trigger: CAGCCAGAAGAAATGTGCCAAGCAGGGGGACGGTGACAGCCGCAACGGCAGCCCAAGCCTTGGGCGGGACTCGCCAGACACTATGCTTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375793.2
ENST00000375799.8
CDS CAA 90 bp TACTCCTTGCCCGGCTCGGTGGAGACGGCGCTGATGTCGCCCAGCTaGGCTGTGCCCAAAGAGCGGAAGAAGCTGGTCTGGCAATCCTCA +
Preference number: 6 (lower is better)
Translates to: YSLPGSVETALMSPS*AVPKERKKLVWQSS
Trigger: TGAGGATTGCCAGACCAGCTTCTTCCGCTCTTTGGGCACAGCCAAGCTGGGCGACATCAGCGCCGTCTCCACCGAGCCGGGCAAGGAGTA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000477849.1
ENST00000642363.1
CDS TCA 72 bp GGAACAACCGCAGGTAGCTCTCCAAGGAGTTCTCGTTaGGGGCCAGGTACAGCCAGGCACGGCCCGTACAGC +
Preference number: 6 (lower is better)
Translates to: GTTAGSSPRSSR*GPGTARHGPYS
Trigger: GCTGTACGGGCCGTGCCTGGCTGTACCTGGCCCTCAACGAGAACTCCTTGGAGAGCTACCTGCGGTTGTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462455.1
CDS CCA 72 bp CCAGAATCCTCAGCGCTACTCAGACACGGGCTGGGCTaGTCTCGCTTGAGCTGGCAGAGAACCTCCTGGGTC +
Preference number: 6 (lower is better)
Translates to: PESSALLRHGLG*SRLSWQRTSWV
Trigger: GACCCAGGAGGTTCTCTGCCAGCTCAAGCGAGACCAGCCCAGCCCGTGTCTGAGTAGCGCTGAGGATTCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS GCA 72 bp GCGCCACATCAGCCGTGTCCAGCAGAAACTGCTTCCTaGGGTTGGTGCACACCAGCTTCACCGTCTGCTGGT +
Preference number: 6 (lower is better)
Translates to: APHQPCPAETAS*GWCTPASPSAG
Trigger: ACCAGCAGACGGTGAAGCTGGTGTGCACCAACCGCAGGAAGCAGTTTCTGCTGGACACGGCTGATGTGGCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS GCA 72 bp TCAGCCAGCGCCACATCAGCCGTGTCCAGCAGAAACTaGTTCCTGCGGTTGGTGCACACCAGCTTCACCGTC +
Preference number: 6 (lower is better)
Translates to: SASATSAVSSRN*FLRLVHTSFTV
Trigger: GACGGTGAAGCTGGTGTGCACCAACCGCAGGAAGCAGTTTCTGCTGGACACGGCTGATGTGGCGCTGGCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS CCA 72 bp CCAGAGGAGAGGTCTTGCAGTCCGTACAGCAGGGCGTaGTCCAGGTGCTCACACAGACGCTGTAGGACCTTG +
Preference number: 6 (lower is better)
Translates to: PEERSCSPYSRA*SRCSHRRCRTL
Trigger: CAAGGTCCTACAGCGTCTGTGTGAGCACCTGGACCACGCCCTGCTGTACGGACTGCAAGACCTCTCCTCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS CCA 72 bp ACATGCAGCGGTTGGCCAAGCCCTGCAGGGTCATGGTaGCCGCCACCTGATGTAACAGTGCTTGGACTCTCG +
Preference number: 6 (lower is better)
Translates to: TCSGWPSPAGSW*PPPDVTVLGLS
Trigger: CGAGAGTCCAAGCACTGTTACATCAGGTGGCGGCCACCATGACCCTGCAGGGCTTGGCCAACCGCTGCATGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS CCA 72 bp GGAACATGCAGCGGTTGGCCAAGCCCTGCAGGGTCATaGTGGCCGCCACCTGATGTAACAGTGCTTGGACTC +
Preference number: 6 (lower is better)
Translates to: GTCSGWPSPAGS*WPPPDVTVLGL
Trigger: GAGTCCAAGCACTGTTACATCAGGTGGCGGCCACCATGACCCTGCAGGGCTTGGCCAACCGCTGCATGTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS CCA 72 bp CCGCGGCAGAGACTGTCGCTCCGCTGCCAGGCGCTGTaGATGAGGCTCAAGGCATCCTCGAATTTCTTCTTG +
Preference number: 6 (lower is better)
Translates to: PRQRLSLRCQAL*MRLKASSNFFL
Trigger: CAAGAAGAAATTCGAGGATGCCTTGAGCCTCATCCACAGCGCCTGGCAGCGGAGCGACAGTCTCTGCCGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000477849.1
ENST00000642363.1
CDS CAA 90 bp CTGTCATCCCACTCCAGGTTGGTGGAGGTGACGGAGTTGAAAGAGTaGAGGGACAGACTGTCTGAGCCGTGGACCGAGCTGGGAAGGCGG +
Preference number: 6 (lower is better)
Translates to: LSSHSRLVEVTELKE*RDRLSEPWTELGRR
Trigger: CCGCCTTCCCAGCTCGGTCCACGGCTCAGACAGTCTGTCCCTCAACTCTTTCAACTCCGTCACCTCCACCAACCTGGAGTGGGATGACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS TCA 72 bp GGTCCTCCCAGTGCACAAGGCCGTAGAAGCGCACGGTaGCAGCAGATGCCTCACACTTCGATTCTTGGGCCA +
Preference number: 6 (lower is better)
Translates to: GPPSAQGRRSAR*QQMPHTSILGP
Trigger: TGGCCCAAGAATCGAAGTGTGAGGCATCTGCTGTCACCGTGCGCTTCTACGGCCTTGTGCACTGGGAGGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000477849.1
ENST00000642363.1
CDS GCA 72 bp CCCAGGTTGGTGGCCACGTGCTGCAGCACCTCGATCTaGTTGATGGCCTCTCTCCGAGTAAAATGCACCACG +
Preference number: 6 (lower is better)
Translates to: PRLVATCCSTSI*LMASLRVKCTT
Trigger: CGTGGTGCATTTTACTCGGAGAGAGGCCATCAAGCAGATCGAGGTGCTGCAGCACGTGGCCACCAACCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS GCA 72 bp TGCCCGTTGAGCTGGTCGATAACCTTGCTCAGGGGCTaGCCCAAGCGCTCCATGGAGGTGTCCTTCATCTCA +
Preference number: 6 (lower is better)
Translates to: CPLSWSITLLRG*PKRSMEVSFIS
Trigger: TGAGATGAAGGACACCTCCATGGAGCGCTTGGGGCAGCCCCTGAGCAAGGTTATCGACCAGCTCAACGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS CCA 72 bp CATCAGCCGTGTCCAGCAGAAACTGCTTCCTGCGGTTaGTGCACACCAGCTTCACCGTCTGCTGGTCAAGGC +
Preference number: 6 (lower is better)
Translates to: HQPCPAETASCG*CTPASPSAGQG
Trigger: GCCTTGACCAGCAGACGGTGAAGCTGGTGTGCACCAACCGCAGGAAGCAGTTTCTGCTGGACACGGCTGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS CAA 90 bp TACAGCAGGGCGTGGTCCAGGTGCTCACACAGACGCTGTAGGACCTaGTCATGGTTCCGGATGGCAGGGATCTCATCCTCACATGCAGCA +
Preference number: 6 (lower is better)
Translates to: YSRAWSRCSHRRCRT*SWFRMAGISSSHAA
Trigger: TGCTGCATGTGAGGATGAGATCCCTGCCATCCGGAACCATGACAAGGTCCTACAGCGTCTGTGTGAGCACCTGGACCACGCCCTGCTGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000462455.1
ENST00000642363.1
CDS CAA 90 bp GCAATCGCACTGTCATCCCACTCCAGGTTGGTGGAGGTGACGGAGTaGAAAGAGTTGAGGGACAGACTGTCTGAGCCGTGGACCGAGCTG +
Preference number: 6 (lower is better)
Translates to: AIALSSHSRLVEVTE*KELRDRLSEPWTEL
Trigger: CAGCTCGGTCCACGGCTCAGACAGTCTGTCCCTCAACTCTTTCAACTCCGTCACCTCCACCAACCTGGAGTGGGATGACAGTGCGATTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS TCA 72 bp GGCAGAGACTGTCGCTCCGCTGCCAGGCGCTGTGGATaGGGCTCAAGGCATCCTCGAATTTCTTCTTGTTGG +
Preference number: 6 (lower is better)
Translates to: GRDCRSAARRCG*GSRHPRISSCW
Trigger: CCAACAAGAAGAAATTCGAGGATGCCTTGAGCCTCATCCACAGCGCCTGGCAGCGGAGCGACAGTCTCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000477849.1
ENST00000642363.1
CDS GCA 72 bp AGGTCTTGCAGTCCGTACAGCAGGGCGTGGTCCAGGTaGTCACACAGACGCTGTAGGACCTTGTCATGGTTC +
Preference number: 6 (lower is better)
Translates to: RSCSPYSRAWSR*SHRRCRTLSWF
Trigger: GAACCATGACAAGGTCCTACAGCGTCTGTGTGAGCACCTGGACCACGCCCTGCTGTACGGACTGCAAGACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS GCA 72 bp AGCAGCACGTACAGCAGCTGCAGGTTGCCCTCCATGTaGCCGGTGCTCATCCGGATCATTTTGAACAGCTGC +
Preference number: 6 (lower is better)
Translates to: SSTYSSCRLPSM*PVLIRIILNSC
Trigger: GCAGCTGTTCAAAATGATCCGGATGAGCACCGGGCACATGGAGGGCAACCTGCAGCTGCTGTACGTGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS CCA 72 bp CTTGGGCCACAAATTTGGCCAGTGCCAGCTTCTCCATaGTGGCATCCGTCAGGATGCTGGGGTAGGGAGGTT +
Preference number: 6 (lower is better)
Translates to: LGPQIWPVPASP*WHPSGCWGREV
Trigger: AACCTCCCTACCCCAGCATCCTGACGGATGCCACCATGGAGAAGCTGGCACTGGCCAAATTTGTGGCCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS CCA 72 bp CCCAAAGAGCGGAAGAAGCTGGTCTGGCAATCCTCATaGCACGTAAAGAGGCGGTCATCCGTGAGGACCAGG +
Preference number: 6 (lower is better)
Translates to: PKERKKLVWQSS*HVKRRSSVRTR
Trigger: CCTGGTCCTCACGGATGACCGCCTCTTTACGTGCCATGAGGATTGCCAGACCAGCTTCTTCCGCTCTTTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000477849.1
ENST00000642363.1
CDS CAA 72 bp GCGTGGTCCAGGTGCTCACACAGACGCTGTAGGACCTaGTCATGGTTCCGGATGGCAGGGATCTCATCCTCA +
Preference number: 6 (lower is better)
Translates to: AWSRCSHRRCRT*SWFRMAGISSS
Trigger: TGAGGATGAGATCCCTGCCATCCGGAACCATGACAAGGTCCTACAGCGTCTGTGTGAGCACCTGGACCACGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000462455.1
ENST00000642363.1
CDS CAA 72 bp AGGTTGGTGGCCACGTGCTGCAGCACCTCGATCTGCTaGATGGCCTCTCTCCGAGTAAAATGCACCACGAGC +
Preference number: 6 (lower is better)
Translates to: RLVATCCSTSIC*MASLRVKCTTS
Trigger: GCTCGTGGTGCATTTTACTCGGAGAGAGGCCATCAAGCAGATCGAGGTGCTGCAGCACGTGGCCACCAACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS CAA 72 bp CACTCCAGGTTGGTGGAGGTGACGGAGTTGAAAGAGTaGAGGGACAGACTGTCTGAGCCGTGGACCGAGCTG +
Preference number: 6 (lower is better)
Translates to: HSRLVEVTELKE*RDRLSEPWTEL
Trigger: CAGCTCGGTCCACGGCTCAGACAGTCTGTCCCTCAACTCTTTCAACTCCGTCACCTCCACCAACCTGGAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS CAA 72 bp ACATCAGCCGTGTCCAGCAGAAACTGCTTCCTGCGGTaGGTGCACACCAGCTTCACCGTCTGCTGGTCAAGG +
Preference number: 6 (lower is better)
Translates to: TSAVSSRNCFLR*VHTSFTVCWSR
Trigger: CCTTGACCAGCAGACGGTGAAGCTGGTGTGCACCAACCGCAGGAAGCAGTTTCTGCTGGACACGGCTGATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS TCA 72 bp GGTGACGGAGTTGAAAGAGTTGAGGGACAGACTGTCTaGGCCGTGGACCGAGCTGGGAAGGCGGTCTTCAAA +
Preference number: 6 (lower is better)
Translates to: GDGVERVEGQTV*AVDRAGKAVFK
Trigger: TTTGAAGACCGCCTTCCCAGCTCGGTCCACGGCTCAGACAGTCTGTCCCTCAACTCTTTCAACTCCGTCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS TCA 72 bp ACTCTCGACGGTAAAGCGGTAGAAGTCCATTGGGGCTaGAAGCCCCTCACTAAAGTCGCAAAGCGGCGGCCT +
Preference number: 6 (lower is better)
Translates to: TLDGKAVEVHWG*KPLTKVAKRRP
Trigger: AGGCCGCCGCTTTGCGACTTTAGTGAGGGGCTTTCAGCCCCAATGGACTTCTACCGCTTTACCGTCGAGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS CCA 72 bp AGCTTGGCTGTGCCCAAAGAGCGGAAGAAGCTGGTCTaGCAATCCTCATGGCACGTAAAGAGGCGGTCATCC +
Preference number: 6 (lower is better)
Translates to: SLAVPKERKKLV*QSSWHVKRRSS
Trigger: GGATGACCGCCTCTTTACGTGCCATGAGGATTGCCAGACCAGCTTCTTCCGCTCTTTGGGCACAGCCAAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000477849.1
ENST00000642363.1
CDS CAA 72 bp TGGATGAGGCTCAAGGCATCCTCGAATTTCTTCTTGTaGGAGGCTTCCTGGATCGCCGTGTGGGGGAGGTCC +
Preference number: 6 (lower is better)
Translates to: WMRLKASSNFFL*EASWIAVWGRS
Trigger: GGACCTCCCCCACACGGCGATCCAGGAAGCCTCCAACAAGAAGAAATTCGAGGATGCCTTGAGCCTCATCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000477849.1
ENST00000642363.1
CDS CAA 72 bp CTGTGGATGAGGCTCAAGGCATCCTCGAATTTCTTCTaGTTGGAGGCTTCCTGGATCGCCGTGTGGGGGAGG +
Preference number: 6 (lower is better)
Translates to: LWMRLKASSNFF*LEASWIAVWGR
Trigger: CCTCCCCCACACGGCGATCCAGGAAGCCTCCAACAAGAAGAAATTCGAGGATGCCTTGAGCCTCATCCACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000477849.1
ENST00000642363.1
CDS TCA 72 bp CTAGGTAAGGGGCATCCAGATCCAGCTCGAAACGAATaGACTCTAGCCCGGACACCAAGGTCAGGAAGAGCG +
Preference number: 6 (lower is better)
Translates to: LGKGHPDPARNE*TLARTPRSGRA
Trigger: CGCTCTTCCTGACCTTGGTGTCCGGGCTAGAGTTCATTCGTTTCGAGCTGGATCTGGATGCCCCTTACCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000462455.1
ENST00000642363.1
CDS CCA 72 bp TCCAGGTGCTCACACAGACGCTGTAGGACCTTGTCATaGTTCCGGATGGCAGGGATCTCATCCTCACATGCA +
Preference number: 6 (lower is better)
Translates to: SRCSHRRCRTLS*FRMAGISSSHA
Trigger: TGCATGTGAGGATGAGATCCCTGCCATCCGGAACCATGACAAGGTCCTACAGCGTCTGTGTGAGCACCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000462455.1
ENST00000642363.1
CDS CCA 72 bp CGCACGGTGACAGCAGATGCCTCACACTTCGATTCTTaGGCCACAAATTTGGCCAGTGCCAGCTTCTCCATG +
Preference number: 6 (lower is better)
Translates to: RTVTADASHFDS*ATNLASASFSM
Trigger: CATGGAGAAGCTGGCACTGGCCAAATTTGTGGCCCAAGAATCGAAGTGTGAGGCATCTGCTGTCACCGTGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000477849.1
ENST00000642363.1
CDS CAA 72 bp CTAGATGGGGCAATCGCACTGTCATCCCACTCCAGGTaGGTGGAGGTGACGGAGTTGAAAGAGTTGAGGGAC +
Preference number: 6 (lower is better)
Translates to: LDGAIALSSHSR*VEVTELKELRD
Trigger: GTCCCTCAACTCTTTCAACTCCGTCACCTCCACCAACCTGGAGTGGGATGACAGTGCGATTGCCCCATCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS CAA 72 bp GCGCACGGTGACAGCAGATGCCTCACACTTCGATTCTaGGGCCACAAATTTGGCCAGTGCCAGCTTCTCCAT +
Preference number: 6 (lower is better)
Translates to: AHGDSRCLTLRF*GHKFGQCQLLH
Trigger: ATGGAGAAGCTGGCACTGGCCAAATTTGTGGCCCAAGAATCGAAGTGTGAGGCATCTGCTGTCACCGTGCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000477849.1
ENST00000642363.1
CDS CAA 90 bp CCATCCTCACTAGATGGGGCAATCGCACTGTCATCCCACTCCAGGTaGGTGGAGGTGACGGAGTTGAAAGAGTTGAGGGACAGACTGTCT +
Preference number: 6 (lower is better)
Translates to: PSSLDGAIALSSHSR*VEVTELKELRDRLS
Trigger: AGACAGTCTGTCCCTCAACTCTTTCAACTCCGTCACCTCCACCAACCTGGAGTGGGATGACAGTGCGATTGCCCCATCTAGTGAGGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375793.2
CDS CCA 72 bp CAGATGCCTCACACTTCGATTCTTGGGCCACAAATTTaGCCAGTGCCAGCTTCTCCATGGTGGCATCCGTCA +
Preference number: 6 (lower is better)
Translates to: QMPHTSILGPQI*PVPASPWWHPS
Trigger: TGACGGATGCCACCATGGAGAAGCTGGCACTGGCCAAATTTGTGGCCCAAGAATCGAAGTGTGAGGCATCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000477849.1
ENST00000642363.1
CDS TCA 72 bp GGGGTAGGGAGGTTCTCGACAGCCTTTGATCATGGCTaGCTTCAAAGAAGCCAAAAAGAACTCAGCCAGCGC +
Preference number: 6 (lower is better)
Translates to: GVGRFSTAFDHG*LQRSQKELSQR
Trigger: GCGCTGGCTGAGTTCTTTTTGGCTTCTTTGAAGTCAGCCATGATCAAAGGCTGTCGAGAACCTCCCTACCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS CCA 72 bp CACACAGACGCTGTAGGACCTTGTCATGGTTCCGGATaGCAGGGATCTCATCCTCACATGCAGCAAAATAGC +
Preference number: 6 (lower is better)
Translates to: HTDAVGPCHGSG*QGSHPHMQQNS
Trigger: GCTATTTTGCTGCATGTGAGGATGAGATCCCTGCCATCCGGAACCATGACAAGGTCCTACAGCGTCTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000462455.1
ENST00000642363.1
CDS CCA 72 bp AAGTTCATTGTAAGAAACGGCCTCTTCCACCAGGTATaGCTTCTCTGTGGCCCCTTTCCGGAGCAGGTAGAC +
Preference number: 6 (lower is better)
Translates to: KFIVRNGLFHQV*LLCGPFPEQVD
Trigger: GTCTACCTGCTCCGGAAAGGGGCCACAGAGAAGCCATACCTGGTGGAAGAGGCCGTTTCTTACAATGAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1
CDS TCA 72 bp TTTTCTCGGAACACGTGGATCATGAGCAGGAGCAGGTaGTTGTTGTCTACTCTGAACTCCGAGGAATGGACC +
Preference number: 6 (lower is better)
Translates to: FSRNTWIMSRSR*LLSTLNSEEWT
Trigger: GGTCCATTCCTCGGAGTTCAGAGTAGACAACAATCACCTGCTCCTGCTCATGATCCACGTGTTCCGAGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375793.2
ENST00000375799.8
ENST00000642363.1