RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PLEKHH1 (Homo sapiens)

Ensembl gene IDs: ENSG00000054690

Ensembl transcript IDs: ENST00000329153.10, ENST00000557971.5, ENST00000558214.1, ENST00000558296.1, ENST00000558366.5, ENST00000558386.5, ENST00000558981.5, ENST00000559168.1, ENST00000559766.1, ENST00000559832.1, ENST00000559981.1, ENST00000560100.1, ENST00000561057.1, ENST00000561135.1, ENST00000561370.5, ENST00000561456.5

Found 637 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCAGGTGCCTCAGCTGTTCAGCGGGGGCCCCATGTCTATAGCGCCTaGGGTGGAACCTGTCTAGGACCTGCTGGAGAAGATGCTGAGCCT +
Preference number: 1 (lower is better)
Translates to: PGASAVQRGPHVYSA*GGTCLGPAGEDAEP
Trigger: AGGCTCAGCATCTTCTCCAGCAGGTCCTAGACAGGTTCCACCCCAGGCGCTATAGACATGGGGCCCCCGCTGAACAGCTGAGGCACCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561370.5
3UTR GCA 90 bp ATGAGACAGGGAGGGGTCAGATTGGACCTACCTCCTGCCCTTGCTTaGACATTGCGTGGTACTGGGTTTGGCCTAAAGTCCAGTGTGAGG +
Preference number: 1 (lower is better)
Translates to: MRQGGVRLDLPPALA*TLRGTGFGLKSSVR
Trigger: CCTCACACTGGACTTTAGGCCAAACCCAGTACCACGCAATGTGCAAGCAAGGGCAGGAGGTAGGTCCAATCTGACCCCTCCCTGTCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
3UTR GCA 90 bp CACCAAAGAAAGGCCATTTCCTGGCCACGGTCAGGTAGATGCGGATaGACTCAGGAGGGGAGCATCCTTGCAATGTTGCCCATTTTGTGG +
Preference number: 1 (lower is better)
Translates to: HQRKAISWPRSGRCG*TQEGSILAMLPILW
Trigger: CCACAAAATGGGCAACATTGCAAGGATGCTCCCCTCCTGAGTGCATCCGCATCTACCTGACCGTGGCCAGGAAATGGCCTTTCTTTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561370.5
3UTR CCA 90 bp AGGGGTCAGATTGGACCTACCTCCTGCCCTTGCTTGCACATTGCGTaGTACTGGGTTTGGCCTAAAGTCCAGTGTGAGGAAAACAGCTTG +
Preference number: 1 (lower is better)
Translates to: RGQIGPTSCPCLHIA*YWVWPKVQCEENSL
Trigger: CAAGCTGTTTTCCTCACACTGGACTTTAGGCCAAACCCAGTACCACGCAATGTGCAAGCAAGGGCAGGAGGTAGGTCCAATCTGACCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329153.10
3UTR CCA 90 bp TATCCAAAGGGAATCATAACTGTGCTGTTCAGAGGCCCAGTGGTGTaGGCTCCTGTTGGTCTGGAGATCCTCTCAGATGCACAGTGCCCT +
Preference number: 1 (lower is better)
Translates to: YPKGIITVLFRGPVV*APVGLEILSDAQCP
Trigger: AGGGCACTGTGCATCTGAGAGGATCTCCAGACCAACAGGAGCCCACACCACTGGGCCTCTGAACAGCACAGTTATGATTCCCTTTGGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561370.5
3UTR CCA 90 bp GGACCTACCTCCTGCCCTTGCTTGCACATTGCGTGGTACTGGGTTTaGCCTAAAGTCCAGTGTGAGGAAAACAGCTTGAATCTTAGCAGG +
Preference number: 1 (lower is better)
Translates to: GPTSCPCLHIAWYWV*PKVQCEENSLNLSR
Trigger: CCTGCTAAGATTCAAGCTGTTTTCCTCACACTGGACTTTAGGCCAAACCCAGTACCACGCAATGTGCAAGCAAGGGCAGGAGGTAGGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
3UTR TCA 90 bp AGTGTTCTGCTCTGGTTAGCTCTTAAAGAGGAATCTGCCCTGCCTTaGGGACTGCTGCAAGGAAGAGAAGAGCACGTAAGCACCCAACTG +
Preference number: 1 (lower is better)
Translates to: SVLLWLALKEESALP*GLLQGREEHVSTQL
Trigger: CAGTTGGGTGCTTACGTGCTCTTCTCTTCCTTGCAGCAGTCCTCAAGGCAGGGCAGATTCCTCTTTAAGAGCTAACCAGAGCAGAACACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561370.5
3UTR CCA 90 bp CAGATTGGACCTACCTCCTGCCCTTGCTTGCACATTGCGTGGTACTaGGTTTGGCCTAAAGTCCAGTGTGAGGAAAACAGCTTGAATCTT +
Preference number: 1 (lower is better)
Translates to: QIGPTSCPCLHIAWY*VWPKVQCEENSLNL
Trigger: AAGATTCAAGCTGTTTTCCTCACACTGGACTTTAGGCCAAACCCAGTACCACGCAATGTGCAAGCAAGGGCAGGAGGTAGGTCCAATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
3UTR CCA 90 bp TGCTGGGGCTTGGGAGCAGCCATCCGGAAGATCAACTTCTCAATGTaGCTTTTTCCAGAGCTCTTGTCTGGGATAGATCTAATCACAAGC +
Preference number: 1 (lower is better)
Translates to: CWGLGAAIRKINFSM*LFPELLSGIDLITS
Trigger: GCTTGTGATTAGATCTATCCCAGACAAGAGCTCTGGAAAAAGCCACATTGAGAAGTTGATCTTCCGGATGGCTGCTCCCAAGCCCCAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561370.5
3UTR TCA 90 bp CGTGGTACTGGGTTTGGCCTAAAGTCCAGTGTGAGGAAAACAGCTTaGATCTTAGCAGGTATAGCATGTTATCCTGCAAAGACTGCCCCA +
Preference number: 1 (lower is better)
Translates to: RGTGFGLKSSVRKTA*ILAGIACYPAKTAP
Trigger: TGGGGCAGTCTTTGCAGGATAACATGCTATACCTGCTAAGATTCAAGCTGTTTTCCTCACACTGGACTTTAGGCCAAACCCAGTACCACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329153.10
3UTR TCA 90 bp AGCAGAGTGCATTTGCTTGGTCTTTTACAAGAAGAAGGAAACAAATaGTGGCCCACTACAGTGAACACAGCCTTCACCGAGCGCTGTCCA +
Preference number: 1 (lower is better)
Translates to: SRVHLLGLLQEEGNK*WPTTVNTAFTERCP
Trigger: TGGACAGCGCTCGGTGAAGGCTGTGTTCACTGTAGTGGGCCATCATTTGTTTCCTTCTTCTTGTAAAAGACCAAGCAAATGCACTCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
3UTR TCA 90 bp CTGTCACCAGCCCTGCAGGAATTATTCAGGAACCTGTGGTACATGTaGCTTGTTCGAGGTAGAAATGTCTCAGCTAGATCCCCAAGTTGT +
Preference number: 1 (lower is better)
Translates to: LSPALQELFRNLWYM*LVRGRNVSARSPSC
Trigger: ACAACTTGGGGATCTAGCTGAGACATTTCTACCTCGAACAAGTCACATGTACCACAGGTTCCTGAATAATTCCTGCAGGGCTGGTGACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329153.10
ENST00000559168.1
3UTR TCA 90 bp GGGAGGAGAGAGGGTGGGGGAAATAGATTGACCCCAAATTCAGTGTaGACACAGCTCCATTCTTGTTTACTCTTCCTTTGGACTCCTACT +
Preference number: 1 (lower is better)
Translates to: GRREGGGNRLTPNSV*TQLHSCLLFLWTPT
Trigger: AGTAGGAGTCCAAAGGAAGAGTAAACAAGAATGGAGCTGTGTTCACACTGAATTTGGGGTCAATCTATTTCCCCCACCCTCTCTCCTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329153.10
3UTR TCA 90 bp AATCACAAGCATGAAGTCATCCCTGCAGCCACCAAACGTTGTCACTaGAGAGTAGGGGTAAGTGATGTGCACTTGCATAGTGTTGTGGTC +
Preference number: 1 (lower is better)
Translates to: NHKHEVIPAATKRCH*RVGVSDVHLHSVVV
Trigger: GACCACAACACTATGCAAGTGCACATCACTTACCCCTACTCTTCAGTGACAACGTTTGGTGGCTGCAGGGATGACTTCATGCTTGTGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561370.5
3UTR CCA 90 bp CCGGAAGATCAACTTCTCAATGTGGCTTTTTCCAGAGCTCTTGTCTaGGATAGATCTAATCACAAGCATGAAGTCATCCCTGCAGCCACC +
Preference number: 1 (lower is better)
Translates to: PEDQLLNVAFSRALV*DRSNHKHEVIPAAT
Trigger: GGTGGCTGCAGGGATGACTTCATGCTTGTGATTAGATCTATCCCAGACAAGAGCTCTGGAAAAAGCCACATTGAGAAGTTGATCTTCCGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561057.1
ENST00000561370.5
3UTR GCA 90 bp AACAGCTTGAATCTTAGCAGGTATAGCATGTTATCCTGCAAAGACTaGCCCAGAAGGGGCTGTACCAATGCCTACATACCAATAATGGGG +
Preference number: 1 (lower is better)
Translates to: NSLNLSRYSMLSCKD*PRRGCTNAYIPIMG
Trigger: CCCCATTATTGGTATGTAGGCATTGGTACAGCCCCTTCTGGGGCAGTCTTTGCAGGATAACATGCTATACCTGCTAAGATTCAAGCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
3UTR CCA 90 bp TCTGCAATCTTGGGAGCAGCCATCCGGAAGATCAACTTCTCAATGTaGCTTTTTCCAGAGCTCTTGTCTGGGATAGATCTAATCACAAGC +
Preference number: 1 (lower is better)
Translates to: SAILGAAIRKINFSM*LFPELLSGIDLITS
Trigger: GCTTGTGATTAGATCTATCCCAGACAAGAGCTCTGGAAAAAGCCACATTGAGAAGTTGATCTTCCGGATGGCTGCTCCCAAGATTGCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561057.1
3UTR TCA 90 bp TCTAGAGGAGACTGTCTAGTCTCCTCTGCACTCAATCAGAAGGTCTaGATTGAGGGGGATTATGGTATTATCAGTAAGGCAAAAGATGAA +
Preference number: 1 (lower is better)
Translates to: SRGDCLVSSALNQKV*IEGDYGIISKAKDE
Trigger: TTCATCTTTTGCCTTACTGATAATACCATAATCCCCCTCAATTCAGACCTTCTGATTGAGTGCAGAGGAGACTAGACAGTCTCCTCTAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329153.10
3UTR CAA 90 bp TGCGGATGCACTCAGGAGGGGAGCATCCTTGCAATGTTGCCCATTTaGTGGTCAACATATCTGCCAGGTGCCTCAGCTGTTCAGCGGGGG +
Preference number: 2 (lower is better)
Translates to: CGCTQEGSILAMLPI*WSTYLPGASAVQRG
Trigger: CCCCCGCTGAACAGCTGAGGCACCTGGCAGATATGTTGACCACAAAATGGGCAACATTGCAAGGATGCTCCCCTCCTGAGTGCATCCGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561370.5
3UTR CAA 90 bp CAGGGAGGGGTCAGATTGGACCTACCTCCTGCCCTTGCTTGCACATaGCGTGGTACTGGGTTTGGCCTAAAGTCCAGTGTGAGGAAAACA +
Preference number: 2 (lower is better)
Translates to: QGGVRLDLPPALACT*RGTGFGLKSSVRKT
Trigger: TGTTTTCCTCACACTGGACTTTAGGCCAAACCCAGTACCACGCAATGTGCAAGCAAGGGCAGGAGGTAGGTCCAATCTGACCCCTCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329153.10
3UTR CAA 90 bp AATGAGACAGGGAGGGGTCAGATTGGACCTACCTCCTGCCCTTGCTaGCACATTGCGTGGTACTGGGTTTGGCCTAAAGTCCAGTGTGAG +
Preference number: 2 (lower is better)
Translates to: NETGRGQIGPTSCPC*HIAWYWVWPKVQCE
Trigger: CTCACACTGGACTTTAGGCCAAACCCAGTACCACGCAATGTGCAAGCAAGGGCAGGAGGTAGGTCCAATCTGACCCCTCCCTGTCTCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
3UTR-3UTR GCA 90 bp CCAGAGCTGTTATGTCTGTCACCAGCCCTGCAGGAATTATTCAGGAACCTGTGGCCTCCTGCCCTTGCTTaGACATTGCGTGGTACTGGG +
Preference number: 2 (lower is better)
Translates to: PELLCLSPALQELFRNLWPPALA*TLRGTG
Trigger: CCCAGTACCACGCAATGTGCAAGCAAGGGCAGGAGG...CCACAGGTTCCTGAATAATTCCTGCAGGGCTGGTGACAGACATAACAGCTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329153.10
3UTR-3UTR CCA 90 bp ATGTGCACTTGCATAGTGTTGTGGTCCAGGATGCTGACGCCATCCTCATTCACACCAGAGCGTTCTCCTTaGAAGACAGCTGGGCAGGCT +
Preference number: 2 (lower is better)
Translates to: MCTCIVLWSRMLTPSSFTPERSP*KTAGQA
Trigger: AGCCTGCCCAGCTGTCTTCCAAGGAGAACGCTCTGG...TGTGAATGAGGATGGCGTCAGCATCCTGGACCACAACACTATGCAAGTGCACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561370.5
3UTR CAA 90 bp TCAGGTAGATGCGGATGCACTCAGGAGGGGAGCATCCTTGCAATGTaGCCCATTTTGTGGTCAACATATCTGCCAGGTGCCTCAGCTGTT +
Preference number: 2 (lower is better)
Translates to: SGRCGCTQEGSILAM*PILWSTYLPGASAV
Trigger: AACAGCTGAGGCACCTGGCAGATATGTTGACCACAAAATGGGCAACATTGCAAGGATGCTCCCCTCCTGAGTGCATCCGCATCTACCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561370.5
3UTR-3UTR CCA 90 bp GAATCGGGTAGGAGAAATATTCACAGCAACGTTGGCCCCTTGGTAGCACAGGAATCCCCATATTCTACCTaGGCCATCAGGGCAGCCATC +
Preference number: 2 (lower is better)
Translates to: ESGRRNIHSNVGPLVAQESPYST*AIRAAI
Trigger: GATGGCTGCCCTGATGGCCCAGGTAGAATATGGGGA...TTCCTGTGCTACCAAGGGGCCAACGTTGCTGTGAATATTTCTCCTACCCGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561370.5
3UTR-3UTR GCA 90 bp CCAGAGGCACTAGTGGTGTTGGGGAATCGGGTAGGAGAAATATTCACAGCAACGTGTGGTCAACATATCTaGCAGGTGCCTCAGCTGTTC +
Preference number: 2 (lower is better)
Translates to: PEALVVLGNRVGEIFTATCGQHI*QVPQLF
Trigger: GAACAGCTGAGGCACCTGGCAGATATGTTGACCACA...CGTTGCTGTGAATATTTCTCCTACCCGATTCCCCAACACCACTAGTGCCTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561370.5
3UTR-3UTR GCA 90 bp CAGAAGAAAAGAACTGTCGTCCATCCAGTTCCCACAGCTGGCAGGCTCCGGGTGGCATCCTTGCAATGTTaGCCATTTTGTGGTCAACAT +
Preference number: 2 (lower is better)
Translates to: QKKRTVVHPVPTAGRLRVASLQC*PFCGQH
Trigger: ATGTTGACCACAAAATGGGCAACATTGCAAGGATGC...CACCCGGAGCCTGCCAGCTGTGGGAACTGGATGGACGACAGTTCTTTTCTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561370.5
3UTR-3UTR GCA 90 bp AGCACTGATGCCCTCAGTAACAGTGGATCATCCCTGTCTATGTCTAGAATCAGGTCAGGTAGATGCGGATaGACTCAGGAGGGGAGCATC +
Preference number: 2 (lower is better)
Translates to: STDALSNSGSSLSMSRIRSGRCG*TQEGSI
Trigger: GATGCTCCCCTCCTGAGTGCATCCGCATCTACCTGA...CCTGATTCTAGACATAGACAGGGATGATCCACTGTTACTGAGGGCATCAGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561370.5
3UTR CAA 90 bp CACCAGCCCTGCAGGAATTATTCAGGAACCTGTGGTACATGTGACTaGTTCGAGGTAGAAATGTCTCAGCTAGATCCCCAAGTTGTGGGG +
Preference number: 2 (lower is better)
Translates to: HQPCRNYSGTCGTCD*FEVEMSQLDPQVVG
Trigger: CCCCACAACTTGGGGATCTAGCTGAGACATTTCTACCTCGAACAAGTCACATGTACCACAGGTTCCTGAATAATTCCTGCAGGGCTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329153.10
ENST00000559168.1
3UTR-3UTR TCA 90 bp CCAGAGCTGTTATGTCTGTCACCAGCCCTGCAGGAATTATTCAGGAACCTGTGGGTCCAGTCATTAAAATaGGACAGGGAGGGGTCAGAT +
Preference number: 2 (lower is better)
Translates to: PELLCLSPALQELFRNLWVQSLK*DREGSD
Trigger: ATCTGACCCCTCCCTGTCTCATTTTAATGACTGGAC...CCACAGGTTCCTGAATAATTCCTGCAGGGCTGGTGACAGACATAACAGCTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329153.10
3UTR-3UTR GCA 90 bp AGCACTGATGCCCTCAGTAACAGTGGATCATCCCTGTCTATGTCTAGAATCAGGCTGAGGCAGGAGAATTaGTTGAACCCTGTGGACTGG +
Preference number: 2 (lower is better)
Translates to: STDALSNSGSSLSMSRIRLRQEN*LNPVDW
Trigger: CCAGTCCACAGGGTTCAAGCAATTCTCCTGCCTCAG...CCTGATTCTAGACATAGACAGGGATGATCCACTGTTACTGAGGGCATCAGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329153.10
3UTR-3UTR CCA 90 bp GGTAGGAGAAATATTCACAGCAACGTTGGCCCCTTGGTAGCACAGGAAACAGAACATGTCTATAGCGCCTaGGGTGGAACCTGTCTAGGA +
Preference number: 2 (lower is better)
Translates to: GRRNIHSNVGPLVAQETEHVYSA*GGTCLG
Trigger: TCCTAGACAGGTTCCACCCCAGGCGCTATAGACATG...TTCTGTTTCCTGTGCTACCAAGGGGCCAACGTTGCTGTGAATATTTCTCCTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561370.5
3UTR CAA 90 bp GCGTGGTACTGGGTTTGGCCTAAAGTCCAGTGTGAGGAAAACAGCTaGAATCTTAGCAGGTATAGCATGTTATCCTGCAAAGACTGCCCC +
Preference number: 2 (lower is better)
Translates to: AWYWVWPKVQCEENS*NLSRYSMLSCKDCP
Trigger: GGGGCAGTCTTTGCAGGATAACATGCTATACCTGCTAAGATTCAAGCTGTTTTCCTCACACTGGACTTTAGGCCAAACCCAGTACCACGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
3UTR CAA 90 bp TGTCACATATGTACCCTCACCCTCAAACTAATTCCCAGCAGAAGTTaGCCAGAAGTCTCAAGGAGCATATCCAGGCCCACATGCCTGAAA +
Preference number: 2 (lower is better)
Translates to: CHICTLTLKLIPSRS*PEVSRSISRPTCLK
Trigger: TTTCAGGCATGTGGGCCTGGATATGCTCCTTGAGACTTCTGGCAAACTTCTGCTGGGAATTAGTTTGAGGGTGAGGGTACATATGTGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329153.10
3UTR CAA 90 bp GCCATCCGGAAGATCAACTTCTCAATGTGGCTTTTTCCAGAGCTCTaGTCTGGGATAGATCTAATCACAAGCATGAAGTCATCCCTGCAG +
Preference number: 2 (lower is better)
Translates to: AIRKINFSMWLFPEL*SGIDLITSMKSSLQ
Trigger: CTGCAGGGATGACTTCATGCTTGTGATTAGATCTATCCCAGACAAGAGCTCTGGAAAAAGCCACATTGAGAAGTTGATCTTCCGGATGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561057.1
ENST00000561370.5
3UTR CAA 90 bp CATACCCTAGGATATATATCTCTAAATCCAGAGGCACTAGTGGTGTaGGGGAATCGGGTAGGAGAAATATTCACAGCAACGTTGGCCCCT +
Preference number: 2 (lower is better)
Translates to: HTLGYISLNPEALVV*GNRVGEIFTATLAP
Trigger: AGGGGCCAACGTTGCTGTGAATATTTCTCCTACCCGATTCCCCAACACCACTAGTGCCTCTGGATTTAGAGATATATATCCTAGGGTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561057.1
ENST00000561370.5
3UTR-3UTR TCA 90 bp CCAGAGCTGTTATGTCTGTCACCAGCCCTGCAGGAATTATTCAGGAACCTGTGGAGTCTTCTGTGTTTCTaGCTCATTTTTGGTGGTCTT +
Preference number: 2 (lower is better)
Translates to: PELLCLSPALQELFRNLWSLLCF*LIFGGL
Trigger: AAGACCACCAAAAATGAGTCAGAAACACAGAAGACT...CCACAGGTTCCTGAATAATTCCTGCAGGGCTGGTGACAGACATAACAGCTCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329153.10
3UTR-3UTR GCA 90 bp TCTCTAAATCCAGAGGCACTAGTGGTGTTGGGGAATCGGGTAGGAGAAATATTCGATGAAGGTAGCTTCTaGAATCTTGGGAGCAGCCAT +
Preference number: 2 (lower is better)
Translates to: SLNPEALVVLGNRVGEIFDEGSF*NLGSSH
Trigger: ATGGCTGCTCCCAAGATTGCAGAAGCTACCTTCATC...GAATATTTCTCCTACCCGATTCCCCAACACCACTAGTGCCTCTGGATTTAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561057.1
3UTR CAA 90 bp CAGGCCCACATGCCTGAAATAGTCTTCTGTGTTTCTGACTCATTTTaGGTGGTCTTACAGCAGCAAAAAGCAGAGTGCATTTGCTTGGTC +
Preference number: 2 (lower is better)
Translates to: QAHMPEIVFCVSDSF*VVLQQQKAECICLV
Trigger: GACCAAGCAAATGCACTCTGCTTTTTGCTGCTGTAAGACCACCAAAAATGAGTCAGAAACACAGAAGACTATTTCAGGCATGTGGGCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329153.10
3UTR-3UTR CCA 90 bp CATGTTATCCTGCAAAGACTGCCCCAGAAGGGGCTGTACCAATGCCTACATACCGAATCAGGTAGCATCTaGAGTCATTATTCTTATGAA +
Preference number: 2 (lower is better)
Translates to: HVILQRLPQKGLYQCLHTESGSI*SHYSYE
Trigger: TTCATAAGAATAATGACTCCAGATGCTACCTGATTC...GGTATGTAGGCATTGGTACAGCCCCTTCTGGGGCAGTCTTTGCAGGATAACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329153.10
3UTR-3UTR GCA 90 bp GTTAATAAACAGATCTTCCAAAACACACAGTTACCTGGTTCACAGATAGCTGCTAAGGGGCTGTACCAATaGCTACATACCAATAATGGG +
Preference number: 2 (lower is better)
Translates to: VNKQIFQNTQLPGSQIAAKGLYQ*LHTNNG
Trigger: CCCATTATTGGTATGTAGGCATTGGTACAGCCCCTT...AGCAGCTATCTGTGAACCAGGTAACTGTGTGTTTTGGAAGATCTGTTTATTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329153.10
3UTR-3UTR TCA 90 bp GTTAATAAACAGATCTTCCAAAACACACAGTTACCTGGTTCACAGATAGCTGCTGTGAGGAAAACAGCTTaGATCTTAGCAGGTATAGCA +
Preference number: 2 (lower is better)
Translates to: VNKQIFQNTQLPGSQIAAVRKTA*ILAGIA
Trigger: TGCTATACCTGCTAAGATTCAAGCTGTTTTCCTCAC...AGCAGCTATCTGTGAACCAGGTAACTGTGTGTTTTGGAAGATCTGTTTATTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329153.10
3UTR-3UTR GCA 90 bp TATTATAAAACCAGAGCTGTTATGTCTGTCACCAGCCCTGCAGGAATTATTCAGGGCTGTAAAACTACTTaGCTTGCAAAGTCAAGTACA +
Preference number: 2 (lower is better)
Translates to: YYKTRAVMSVTSPAGIIQGCKTT*LAKSST
Trigger: TGTACTTGACTTTGCAAGGCAAGTAGTTTTACAGCC...CTGAATAATTCCTGCAGGGCTGGTGACAGACATAACAGCTCTGGTTTTATAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329153.10
ENST00000559168.1
3UTR-3UTR GCA 90 bp TATTATAAAACCAGAGCTGTTATGTCTGTCACCAGCCCTGCAGGAATTATTCAGAAAGCAGAGTGCATTTaGTTGGTCTTTTACAAGAAG +
Preference number: 2 (lower is better)
Translates to: YYKTRAVMSVTSPAGIIQKAECI*LVFYKK
Trigger: CTTCTTGTAAAAGACCAAGCAAATGCACTCTGCTTT...CTGAATAATTCCTGCAGGGCTGGTGACAGACATAACAGCTCTGGTTTTATAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329153.10
3UTR-3UTR GCA 90 bp ATCAGAAGGTCTGAATTGAGGGGGATTATGGTATTATCAGTAAGGCAAAAGATGCAGCAAAAAGCAGAGTaGATTTGCTTGGTCTTTTAC +
Preference number: 2 (lower is better)
Translates to: IRRSELRGIMVLSVRQKMQQKAE*ICLVFY
Trigger: GTAAAAGACCAAGCAAATGCACTCTGCTTTTTGCTG...CATCTTTTGCCTTACTGATAATACCATAATCCCCCTCAATTCAGACCTTCTGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000329153.10
3UTR-3UTR CCA 90 bp CCCTGTCTATGTCTAGAATCAGGTAGCATCTGGAGTCATTATTCTTATGAAAAAATGTTGCCCATTTTGTaGTCAACATATCTGCCAGGT +
Preference number: 2 (lower is better)
Translates to: PCLCLESGSIWSHYSYEKMLPIL*STYLPG
Trigger: ACCTGGCAGATATGTTGACCACAAAATGGGCAACAT...TTTTTCATAAGAATAATGACTCCAGATGCTACCTGATTCTAGACATAGACAGGG
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000561370.5
3UTR CAA 90 bp CTTCCAAAACACACAGTTACCTGGTTCACAGATAGCTGCTTTTTATaGACAAACAAGATCATAGTATTTCAGTCATGGTGTCAAGCACAT +
Preference number: 2 (lower is better)
Translates to: LPKHTVTWFTDSCFL*TNKIIVFQSWCQAH
Trigger: ATGTGCTTGACACCATGACTGAAATACTATGATCTTGTTTGTCAATAAAAAGCAGCTATCTGTGAACCAGGTAACTGTGTGTTTTGGAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329153.10
3UTR-3UTR CCA 90 bp GTTAATAAACAGATCTTCCAAAACACACAGTTACCTGGTTCACAGATAGCTGCTTTTCTGACTCATTTTTaGTGGTCTTACAGCAGCAAA +
Preference number: 2 (lower is better)
Translates to: VNKQIFQNTQLPGSQIAAFLTHF*WSYSSK
Trigger: TTTGCTGCTGTAAGACCACCAAAAATGAGTCAGAAA...AGCAGCTATCTGTGAACCAGGTAACTGTGTGTTTTGGAAGATCTGTTTATTAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000329153.10
3UTR CCA 72 bp TCAGCTGTTCAGCGGGGGCCCCATGTCTATAGCGCCTaGGGTGGAACCTGTCTAGGACCTGCTGGAGAAGAT +
Preference number: 3 (lower is better)
Translates to: SAVQRGPHVYSA*GGTCLGPAGED
Trigger: ATCTTCTCCAGCAGGTCCTAGACAGGTTCCACCCCAGGCGCTATAGACATGGGGCCCCCGCTGAACAGCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561370.5
3UTR GCA 72 bp AAGGCCATTTCCTGGCCACGGTCAGGTAGATGCGGATaGACTCAGGAGGGGAGCATCCTTGCAATGTTGCCC +
Preference number: 3 (lower is better)
Translates to: KAISWPRSGRCG*TQEGSILAMLP
Trigger: GGGCAACATTGCAAGGATGCTCCCCTCCTGAGTGCATCCGCATCTACCTGACCGTGGCCAGGAAATGGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561370.5
3UTR GCA 72 bp ACAGGGAGGGGTCAGATTGGACCTACCTCCTGCCCTTaGTTGCACATTGCGTGGTACTGGGTTTGGCCTAAA +
Preference number: 3 (lower is better)
Translates to: TGRGQIGPTSCP*LHIAWYWVWPK
Trigger: TTTAGGCCAAACCCAGTACCACGCAATGTGCAAGCAAGGGCAGGAGGTAGGTCCAATCTGACCCCTCCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
3UTR GCA 72 bp AATGAGACAGGGAGGGGTCAGATTGGACCTACCTCCTaGCCTTGCTTGCACATTGCGTGGTACTGGGTTTGG +
Preference number: 3 (lower is better)
Translates to: NETGRGQIGPTS*PCLHIAWYWVW
Trigger: CCAAACCCAGTACCACGCAATGTGCAAGCAAGGGCAGGAGGTAGGTCCAATCTGACCCCTCCCTGTCTCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
3UTR GCA 72 bp CAAAGAAAGGCCATTTCCTGGCCACGGTCAGGTAGATaGGGATGCACTCAGGAGGGGAGCATCCTTGCAATG +
Preference number: 3 (lower is better)
Translates to: QRKAISWPRSGR*GCTQEGSILAM
Trigger: CATTGCAAGGATGCTCCCCTCCTGAGTGCATCCGCATCTACCTGACCGTGGCCAGGAAATGGCCTTTCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561370.5
3UTR CCA 72 bp CCTACCTCCTGCCCTTGCTTGCACATTGCGTGGTACTaGGTTTGGCCTAAAGTCCAGTGTGAGGAAAACAGC +
Preference number: 3 (lower is better)
Translates to: PTSCPCLHIAWY*VWPKVQCEENS
Trigger: GCTGTTTTCCTCACACTGGACTTTAGGCCAAACCCAGTACCACGCAATGTGCAAGCAAGGGCAGGAGGTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
3UTR CCA 72 bp ATTGGACCTACCTCCTGCCCTTGCTTGCACATTGCGTaGTACTGGGTTTGGCCTAAAGTCCAGTGTGAGGAA +
Preference number: 3 (lower is better)
Translates to: IGPTSCPCLHIA*YWVWPKVQCEE
Trigger: TTCCTCACACTGGACTTTAGGCCAAACCCAGTACCACGCAATGTGCAAGCAAGGGCAGGAGGTAGGTCCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329153.10
3UTR CCA 72 bp CAGGAGGGGAGCATCCTTGCAATGTTGCCCATTTTGTaGTCAACATATCTGCCAGGTGCCTCAGCTGTTCAG +
Preference number: 3 (lower is better)
Translates to: QEGSILAMLPIL*STYLPGASAVQ
Trigger: CTGAACAGCTGAGGCACCTGGCAGATATGTTGACCACAAAATGGGCAACATTGCAAGGATGCTCCCCTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561370.5
3UTR CCA 72 bp CCTCATTCACAGCAATCCACACCAGAGCGTTCTCCTTaGAAGACAGCTGGGCAGGCTGAGCAGCAAAAAGTT +
Preference number: 3 (lower is better)
Translates to: PHSQQSTPERSP*KTAGQAEQQKV
Trigger: AACTTTTTGCTGCTCAGCCTGCCCAGCTGTCTTCCAAGGAGAACGCTCTGGTGTGGATTGCTGTGAATGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561370.5
3UTR-3UTR CAA 90 bp CATGTTATCCTGCAAAGACTGCCCCAGAAGGGGCTGTACCAATGCCTACATACCCAGCACCTTTCCCATTaGGGAAAGGCAGCCCAGTTT +
Preference number: 3 (lower is better)
Translates to: HVILQRLPQKGLYQCLHTQHLSH*GKAAQF
Trigger: AAACTGGGCTGCCTTTCCCAAATGGGAAAGGTGCTG...GGTATGTAGGCATTGGTACAGCCCCTTCTGGGGCAGTCTTTGCAGGATAACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329153.10
3UTR-3UTR CAA 90 bp AAACCAGAGCTGTTATGTCTGTCACCAGCCCTGCAGGAATTATTCAGGAACCTGGAGGCACTAGTGGTGTaGGGGAATCGGGTAGGAGAA +
Preference number: 3 (lower is better)
Translates to: KPELLCLSPALQELFRNLEALVV*GNRVGE
Trigger: TTCTCCTACCCGATTCCCCAACACCACTAGTGCCTC...CAGGTTCCTGAATAATTCCTGCAGGGCTGGTGACAGACATAACAGCTCTGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329153.10
ENST00000559168.1
3UTR-3UTR CAA 90 bp AGCCATCCGGAAGATCAACTTCTCAATGTGGCTTTTTCCAGAGCTCTTGTCTGGGAGGCACTAGTGGTGTaGGGGAATCGGGTAGGAGAA +
Preference number: 3 (lower is better)
Translates to: SHPEDQLLNVAFSRALVWEALVV*GNRVGE
Trigger: TTCTCCTACCCGATTCCCCAACACCACTAGTGCCTC...CCAGACAAGAGCTCTGGAAAAAGCCACATTGAGAAGTTGATCTTCCGGATGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561057.1
ENST00000561370.5
3UTR-3UTR CAA 90 bp GGCACTAGTGGTGTTGGGGAATCGGGTAGGAGAAATATTCACAGCAACGTTGGCAGAGCCAATTCCTTGTaGATAGGAAACCTCCCTGCC +
Preference number: 3 (lower is better)
Translates to: GTSGVGESGRRNIHSNVGRANSL*IGNLPA
Trigger: GGCAGGGAGGTTTCCTATCAACAAGGAATTGGCTCT...GCCAACGTTGCTGTGAATATTTCTCCTACCCGATTCCCCAACACCACTAGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561370.5
3UTR-3UTR CAA 90 bp ACGCCATCCTCATTCACAGCAATCCACACCAGAGCGTTCTCCTTGGAAGACAGCAGCATCCTTGCAATGTaGCCCATTTTGTGGTCAACA +
Preference number: 3 (lower is better)
Translates to: TPSSFTAIHTRAFSLEDSSILAM*PILWST
Trigger: TGTTGACCACAAAATGGGCAACATTGCAAGGATGCT...GCTGTCTTCCAAGGAGAACGCTCTGGTGTGGATTGCTGTGAATGAGGATGGCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561370.5
3UTR-3UTR CAA 90 bp TCAGGAACCTGTGGTACATGTGACTTGTTCGAGGTAGAAATGTCTCAGCTAGATGAGGCACTAGTGGTGTaGGGGAATCGGGTAGGAGAA +
Preference number: 3 (lower is better)
Translates to: SGTCGTCDLFEVEMSQLDEALVV*GNRVGE
Trigger: TTCTCCTACCCGATTCCCCAACACCACTAGTGCCTC...ATCTAGCTGAGACATTTCTACCTCGAACAAGTCACATGTACCACAGGTTCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329153.10
ENST00000559168.1
3UTR-3UTR CAA 90 bp GGGTTAAAGGCTTGGTTTTGGGTGCTACTGCTAAATATACAGTTTTCAGCACTTCAGGGAGGGGTCAGATaGGACCTACCTCCTGCCCTT +
Preference number: 3 (lower is better)
Translates to: GLKAWFWVLLLNIQFSALQGGVR*DLPPAL
Trigger: AAGGGCAGGAGGTAGGTCCAATCTGACCCCTCCCTG...AAGTGCTGAAAACTGTATATTTAGCAGTAGCACCCAAAACCAAGCCTTTAACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329153.10
3UTR-3UTR CAA 90 bp GGCACTAGTGGTGTTGGGGAATCGGGTAGGAGAAATATTCACAGCAACGTTGGCGCAATGTTGCCCATTTaGTGGTCAACATATCTGCCA +
Preference number: 3 (lower is better)
Translates to: GTSGVGESGRRNIHSNVGAMLPI*WSTYLP
Trigger: TGGCAGATATGTTGACCACAAAATGGGCAACATTGC...GCCAACGTTGCTGTGAATATTTCTCCTACCCGATTCCCCAACACCACTAGTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561370.5
3UTR TCA 72 bp CATGAAGTCATCCCTGCAGCCACCAAACGTTGTCACTaGAGAGTAGGGGTAAGTGATGTGCACTTGCATAGT +
Preference number: 3 (lower is better)
Translates to: HEVIPAATKRCH*RVGVSDVHLHS
Trigger: ACTATGCAAGTGCACATCACTTACCCCTACTCTTCAGTGACAACGTTTGGTGGCTGCAGGGATGACTTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561370.5
3UTR GCA 72 bp AACAGCTTGAATCTTAGCAGGTATAGCATGTTATCCTaGAAAGACTGCCCCAGAAGGGGCTGTACCAATGCC +
Preference number: 3 (lower is better)
Translates to: NSLNLSRYSMLS*KDCPRRGCTNA
Trigger: GGCATTGGTACAGCCCCTTCTGGGGCAGTCTTTGCAGGATAACATGCTATACCTGCTAAGATTCAAGCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329153.10
3UTR-3UTR CAA 90 bp CCAGAGCTGTTATGTCTGTCACCAGCCCTGCAGGAATTATTCAGGAACCTGTGGCAAAAGATACACACATaGTTGGGGTTAAAGGCTTGG +
Preference number: 3 (lower is better)
Translates to: PELLCLSPALQELFRNLWQKIHT*LGLKAW
Trigger: CCAAGCCTTTAACCCCAACAATGTGTGTATCTTTTG...CCACAGGTTCCTGAATAATTCCTGCAGGGCTGGTGACAGACATAACAGCTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329153.10
3UTR-3UTR CAA 90 bp GTATCATACCCTAGGATATATATCTCTAAATCCAGAGGCACTAGTGGTGTTGGGGTAGCTTCTGCAATCTaGGGAGCAGCCATCCGGAAG +
Preference number: 3 (lower is better)
Translates to: VSYPRIYISKSRGTSGVGVASAI*GAAIRK
Trigger: CTTCCGGATGGCTGCTCCCAAGATTGCAGAAGCTAC...CCCAACACCACTAGTGCCTCTGGATTTAGAGATATATATCCTAGGGTATGATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561057.1
3UTR-3UTR CAA 90 bp CTTCCAAAACACACAGTTACCTGGTTCACAGATAGCTGCTTTTTATTGACAAACACCTCCTGCCCTTGCTaGCACATTGCGTGGTACTGG +
Preference number: 3 (lower is better)
Translates to: LPKHTVTWFTDSCFLLTNTSCPC*HIAWYW
Trigger: CCAGTACCACGCAATGTGCAAGCAAGGGCAGGAGGT...GTTTGTCAATAAAAAGCAGCTATCTGTGAACCAGGTAACTGTGTGTTTTGGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329153.10
3UTR-3UTR CAA 90 bp CCAGAGCTGTTATGTCTGTCACCAGCCCTGCAGGAATTATTCAGGAACCTGTGGATCAGAAGGTCTGAATaGAGGGGGATTATGGTATTA +
Preference number: 3 (lower is better)
Translates to: PELLCLSPALQELFRNLWIRRSE*RGIMVL
Trigger: TAATACCATAATCCCCCTCAATTCAGACCTTCTGAT...CCACAGGTTCCTGAATAATTCCTGCAGGGCTGGTGACAGACATAACAGCTCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329153.10
3UTR TCA 72 bp GCCCTGCAGGAATTATTCAGGAACCTGTGGTACATGTaGCTTGTTCGAGGTAGAAATGTCTCAGCTAGATCC +
Preference number: 3 (lower is better)
Translates to: ALQELFRNLWYM*LVRGRNVSARS
Trigger: GGATCTAGCTGAGACATTTCTACCTCGAACAAGTCACATGTACCACAGGTTCCTGAATAATTCCTGCAGGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329153.10
ENST00000559168.1
3UTR GCA 72 bp AATCTTAGCAGGTATAGCATGTTATCCTGCAAAGACTaGCCCAGAAGGGGCTGTACCAATGCCTACATACCA +
Preference number: 3 (lower is better)
Translates to: NLSRYSMLSCKD*PRRGCTNAYIP
Trigger: TGGTATGTAGGCATTGGTACAGCCCCTTCTGGGGCAGTCTTTGCAGGATAACATGCTATACCTGCTAAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
3UTR-3UTR CAA 90 bp AAGTTTGCCAGAAGTCTCAAGGAGCATATCCAGGCCCACATGCCTGAAATAGTCGTTTCTGACTCATTTTaGGTGGTCTTACAGCAGCAA +
Preference number: 3 (lower is better)
Translates to: KFARSLKEHIQAHMPEIVVSDSF*VVLQQQ
Trigger: TTGCTGCTGTAAGACCACCAAAAATGAGTCAGAAAC...GACTATTTCAGGCATGTGGGCCTGGATATGCTCCTTGAGACTTCTGGCAAACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
3UTR-3UTR CAA 90 bp CCCTGTCTATGTCTAGAATCAGGTAGCATCTGGAGTCATTATTCTTATGAAAAATGGTGTGGGCTCCTGTaGGTCTGGAGATCCTCTCAG +
Preference number: 3 (lower is better)
Translates to: PCLCLESGSIWSHYSYEKWCGLL*VWRSSQ
Trigger: CTGAGAGGATCTCCAGACCAACAGGAGCCCACACCA...TTTTTCATAAGAATAATGACTCCAGATGCTACCTGATTCTAGACATAGACAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561370.5
3UTR-3UTR CAA 90 bp ACCTGTGGTACATGTGACTTGTTCGAGGTAGAAATGTCTCAGCTAGATCCCCAACTGGCCTCGCAGTTTTaGCCTAGGATATATATCTCT +
Preference number: 3 (lower is better)
Translates to: TCGTCDLFEVEMSQLDPQLASQF*PRIYIS
Trigger: AGAGATATATATCCTAGGCAAAAACTGCGAGGCCAG...TTGGGGATCTAGCTGAGACATTTCTACCTCGAACAAGTCACATGTACCACAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559168.1
3UTR-3UTR CAA 90 bp AAGTTTGCCAGAAGTCTCAAGGAGCATATCCAGGCCCACATGCCTGAAATAGTCAGAAAATTAGCTTCCTaGAGAGTACCAGTGCAGAAA +
Preference number: 3 (lower is better)
Translates to: KFARSLKEHIQAHMPEIVRKLAS*RVPVQK
Trigger: TTTCTGCACTGGTACTCTCAAGGAAGCTAATTTTCT...GACTATTTCAGGCATGTGGGCCTGGATATGCTCCTTGAGACTTCTGGCAAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
3UTR TCA 72 bp GGGTTTGGCCTAAAGTCCAGTGTGAGGAAAACAGCTTaGATCTTAGCAGGTATAGCATGTTATCCTGCAAAG +
Preference number: 3 (lower is better)
Translates to: GFGLKSSVRKTA*ILAGIACYPAK
Trigger: CTTTGCAGGATAACATGCTATACCTGCTAAGATTCAAGCTGTTTTCCTCACACTGGACTTTAGGCCAAACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
3UTR TCA 72 bp CATTTGCTTGGTCTTTTACAAGAAGAAGGAAACAAATaGTGGCCCACTACAGTGAACACAGCCTTCACCGAG +
Preference number: 3 (lower is better)
Translates to: HLLGLLQEEGNK*WPTTVNTAFTE
Trigger: CTCGGTGAAGGCTGTGTTCACTGTAGTGGGCCATCATTTGTTTCCTTCTTCTTGTAAAAGACCAAGCAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
3UTR TCA 72 bp GACTGTCTAGTCTCCTCTGCACTCAATCAGAAGGTCTaGATTGAGGGGGATTATGGTATTATCAGTAAGGCA +
Preference number: 3 (lower is better)
Translates to: DCLVSSALNQKV*IEGDYGIISKA
Trigger: TGCCTTACTGATAATACCATAATCCCCCTCAATTCAGACCTTCTGATTGAGTGCAGAGGAGACTAGACAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329153.10
3UTR-3UTR CAA 90 bp CTTCCAAAACACACAGTTACCTGGTTCACAGATAGCTGCTTTTTATTGACAAACGTTGGGGTTAAAGGCTaGGTTTTGGGTGCTACTGCT +
Preference number: 3 (lower is better)
Translates to: LPKHTVTWFTDSCFLLTNVGVKG*VLGATA
Trigger: AGCAGTAGCACCCAAAACCAAGCCTTTAACCCCAAC...GTTTGTCAATAAAAAGCAGCTATCTGTGAACCAGGTAACTGTGTGTTTTGGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000329153.10
3UTR CCA 72 bp CAACTTCTCAATGTGGCTTTTTCCAGAGCTCTTGTCTaGGATAGATCTAATCACAAGCATGAAGTCATCCCT +
Preference number: 3 (lower is better)
Translates to: QLLNVAFSRALV*DRSNHKHEVIP
Trigger: AGGGATGACTTCATGCTTGTGATTAGATCTATCCCAGACAAGAGCTCTGGAAAAAGCCACATTGAGAAGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561057.1
ENST00000561370.5
3UTR GCA 72 bp CTTCCAAAACACACAGTTACCTGGTTCACAGATAGCTaGTTTTTATTGACAAACAAGATCATAGTATTTCAG +
Preference number: 3 (lower is better)
Translates to: LPKHTVTWFTDS*FLLTNKIIVFQ
Trigger: CTGAAATACTATGATCTTGTTTGTCAATAAAAAGCAGCTATCTGTGAACCAGGTAACTGTGTGTTTTGGAAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CCA 90 bp AACTGTCGTCCATCCAGTTCCCACAGCTGGCAGGCTCCGGGTGGGTTGGTGGGGTCCAGTTCCCACAGCTaGCAGGCTCCGGGTGGGTTG +
Preference number: 4 (lower is better)
Translates to: NCRPSSSHSWQAPGGLVGSSSHS*QAPGGL
Trigger: CAACCCACCCGGAGCCTGCCAGCTGTGGGAACTGGA...CCCCACCAACCCACCCGGAGCCTGCCAGCTGTGGGAACTGGATGGACGACAGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561057.1
ENST00000561370.5
CDS-3UTR TCA 90 bp ACTGTCGTCCATCCAGTTCCCACAGCTGGCAGGCTCCGGGTGGGTTGGTGGGGGTGTGGTCCAGGATGCTaGCGCCATCCTCATTCACAG +
Preference number: 4 (lower is better)
Translates to: TVVHPVPTAGRLRVGWWGCGPGC*RHPHSQ
Trigger: CTGTGAATGAGGATGGCGTCAGCATCCTGGACCACA...CCCCCACCAACCCACCCGGAGCCTGCCAGCTGTGGGAACTGGATGGACGACAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561057.1
ENST00000561370.5
CDS-3UTR GCA 90 bp ACTGTCGTCCATCCAGTTCCCACAGCTGGCAGGCTCCGGGTGGGTTGGTGGGGGTGGCGTTGGAGCTGCTaGTTGACATACCAGAGGAAG +
Preference number: 4 (lower is better)
Translates to: TVVHPVPTAGRLRVGWWGWRWSC*LTYQRK
Trigger: CTTCCTCTGGTATGTCAAGCAGCAGCTCCAACGCCA...CCCCCACCAACCCACCCGGAGCCTGCCAGCTGTGGGAACTGGATGGACGACAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561370.5
CDS-3UTR GCA 90 bp ACTGTCGTCCATCCAGTTCCCACAGCTGGCAGGCTCCGGGTGGGTTGGTGGGGGTTCACTTCTGGGATCTaGATGGCGTTGGAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: TVVHPVPTAGRLRVGWWGFTSGI*MALELL
Trigger: CAGCAGCTCCAACGCCATGCAGATCCCAGAAGTGAA...CCCCCACCAACCCACCCGGAGCCTGCCAGCTGTGGGAACTGGATGGACGACAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561370.5
CDS-3UTR GCA 90 bp GTTGCCCATTTTGTGGTCAACATATCTGCCAGGTGCCTCAGCTGTTCAGCGGGGCAGGGTCCGCTCCACTaGCCGCTGGCAGTAGGTGGC +
Preference number: 4 (lower is better)
Translates to: VAHFVVNISARCLSCSAGQGPLH*PLAVGG
Trigger: GCCACCTACTGCCAGCGGGCAGTGGAGCGGACCCTG...CCCCGCTGAACAGCTGAGGCACCTGGCAGATATGTTGACCACAAAATGGGCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561370.5
CDS-3UTR TCA 90 bp AACTGTCGTCCATCCAGTTCCCACAGCTGGCAGGCTCCGGGTGGGTTGGTGGGGGGTCCGTCTCCCCTTTaGCTTGACTGCGAAAGTACA +
Preference number: 4 (lower is better)
Translates to: NCRPSSSHSWQAPGGLVGGPSPL*LDCEST
Trigger: TGTACTTTCGCAGTCAAGTCAAAGGGGAGACGGACC...CCCCACCAACCCACCCGGAGCCTGCCAGCTGTGGGAACTGGATGGACGACAGTT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000561370.5
CDS-3UTR CCA 90 bp ACTGTCGTCCATCCAGTTCCCACAGCTGGCAGGCTCCGGGTGGGTTGGTGGGGGTGTCACATAGTGTTGTaGTCCAGGATGCTGACGCCA +
Preference number: 4 (lower is better)
Translates to: TVVHPVPTAGRLRVGWWGCHIVL*SRMLTP
Trigger: TGGCGTCAGCATCCTGGACCACAACACTATGTGACA...CCCCCACCAACCCACCCGGAGCCTGCCAGCTGTGGGAACTGGATGGACGACAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561057.1
CDS-3UTR TCA 90 bp TCACAGCAATCCACACCAGAGCGTTCTCCTTGGAAGACAGCTGGGCAGGCTGAGAGTGCACGGGGATGCTaGAGGGCAAGGAGTGGTGGA +
Preference number: 4 (lower is better)
Translates to: SQQSTPERSPWKTAGQAESARGC*RARSGG
Trigger: TCCACCACTCCTTGCCCTTCAGCATCCCCGTGCACT...CTCAGCCTGCCCAGCTGTCTTCCAAGGAGAACGCTCTGGTGTGGATTGCTGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561370.5
CDS-3UTR CCA 90 bp GCCATCCGGAAGATCAACTTCTCAATGTGGCTTTTTCCAGAGCTCTTGTCTGGGCCATGCGCGATGGCCTaGCTTCCCGCTCCCCGGTCC +
Preference number: 4 (lower is better)
Translates to: AIRKINFSMWLFPELLSGPCAMA*LPAPRS
Trigger: GGACCGGGGAGCGGGAAGCCAGGCCATCGCGCATGG...CCCAGACAAGAGCTCTGGAAAAAGCCACATTGAGAAGTTGATCTTCCGGATGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561370.5
CDS-3UTR TCA 90 bp CATGTTATCCTGCAAAGACTGCCCCAGAAGGGGCTGTACCAATGCCTACATACCCAGAGGGCAGGGTGGTaGGGGAGGCGTATAGGCCGT +
Preference number: 4 (lower is better)
Translates to: HVILQRLPQKGLYQCLHTQRAGW*GRRIGR
Trigger: ACGGCCTATACGCCTCCCTCACCACCCTGCCCTCTG...GGTATGTAGGCATTGGTACAGCCCCTTCTGGGGCAGTCTTTGCAGGATAACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CCA 90 bp CATGTTATCCTGCAAAGACTGCCCCAGAAGGGGCTGTACCAATGCCTACATACCGCTGCCTTCAGACCCTaGGCCTGGGAGCCACTGTCC +
Preference number: 4 (lower is better)
Translates to: HVILQRLPQKGLYQCLHTAAFRP*AWEPLS
Trigger: GGACAGTGGCTCCCAGGCCCAGGGTCTGAAGGCAGC...GGTATGTAGGCATTGGTACAGCCCCTTCTGGGGCAGTCTTTGCAGGATAACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CCA 90 bp TGTACCCTCACCCTCAAACTAATTCCCAGCAGAAGTTTGCCAGAAGTCTCAAGGCCATGCGCGATGGCCTaGCTTCCCGCTCCCCGGTCC +
Preference number: 4 (lower is better)
Translates to: CTLTLKLIPSRSLPEVSRPCAMA*LPAPRS
Trigger: GGACCGGGGAGCGGGAAGCCAGGCCATCGCGCATGG...CCTTGAGACTTCTGGCAAACTTCTGCTGGGAATTAGTTTGAGGGTGAGGGTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
3UTR CAA 72 bp CTGTGCTGTTCAGAGGCCCAGTGGTGTGGGCTCCTGTaGGTCTGGAGATCCTCTCAGATGCACAGTGCCCTT +
Preference number: 4 (lower is better)
Translates to: LCCSEAQWCGLL*VWRSSQMHSAL
Trigger: AAGGGCACTGTGCATCTGAGAGGATCTCCAGACCAACAGGAGCCCACACCACTGGGCCTCTGAACAGCACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561370.5
CDS-3UTR TCA 90 bp AACTGTCGTCCATCCAGTTCCCACAGCTGGCAGGCTCCGGGTGGGTTGGTGGGGACCAAACGTTGTCACTaGAGAGTAGGGGTAAGTGAT +
Preference number: 4 (lower is better)
Translates to: NCRPSSSHSWQAPGGLVGTKRCH*RVGVSD
Trigger: ATCACTTACCCCTACTCTTCAGTGACAACGTTTGGT...CCCCACCAACCCACCCGGAGCCTGCCAGCTGTGGGAACTGGATGGACGACAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561370.5
CDS-3UTR GCA 90 bp CATGTTATCCTGCAAAGACTGCCCCAGAAGGGGCTGTACCAATGCCTACATACCGTCAGGCAGCGTTTCTaGCAGTCTACGCTGGCCGGC +
Preference number: 4 (lower is better)
Translates to: HVILQRLPQKGLYQCLHTVRQRF*QSTLAG
Trigger: GCCGGCCAGCGTAGACTGGCAGAAACGCTGCCTGAC...GGTATGTAGGCATTGGTACAGCCCCTTCTGGGGCAGTCTTTGCAGGATAACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CCA 90 bp GCTGAGGCAGGAGAATTGCTTGAACCCTGTGGACTGGGTGACATAGTGACACTGCAGCGGGGGTGTAGGTaGCTTGTTACCCAGCTCCAC +
Preference number: 4 (lower is better)
Translates to: AEAGELLEPCGLGDIVTLQRGCR*LVTQLH
Trigger: GTGGAGCTGGGTAACAAGCCACCTACACCCCCGCTG...CAGTGTCACTATGTCACCCAGTCCACAGGGTTCAAGCAATTCTCCTGCCTCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CCA 90 bp AGGAGAAGCTTACAGCAGCTGAGGTGTTCAGATAAACTAGTTCTGGCCTCGCAGCACTTCCATGCGCGATaGCCTGGCTTCCCGCTCCCC +
Preference number: 4 (lower is better)
Translates to: RRSLQQLRCSDKLVLASQHFHAR*PGFPLP
Trigger: GGGGAGCGGGAAGCCAGGCCATCGCGCATGGAAGTG...CTGCGAGGCCAGAACTAGTTTATCTGAACACCTCAGCTGCTGTAAGCTTCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329153.10
3UTR CAA 72 bp GGGAGGGGTCAGATTGGACCTACCTCCTGCCCTTGCTaGCACATTGCGTGGTACTGGGTTTGGCCTAAAGTC +
Preference number: 4 (lower is better)
Translates to: GRGQIGPTSCPC*HIAWYWVWPKV
Trigger: GACTTTAGGCCAAACCCAGTACCACGCAATGTGCAAGCAAGGGCAGGAGGTAGGTCCAATCTGACCCCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR TCA 90 bp AAACCAGAGCTGTTATGTCTGTCACCAGCCCTGCAGGAATTATTCAGGAACCTGTGGAGACGCCTCTCTTaGTGGCCCGGGGGCTGCCTA +
Preference number: 4 (lower is better)
Translates to: KPELLCLSPALQELFRNLWRRLS*WPGGCL
Trigger: TAGGCAGCCCCCGGGCCATCAAGAGAGGCGTCTCCA...CAGGTTCCTGAATAATTCCTGCAGGGCTGGTGACAGACATAACAGCTCTGGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR TCA 90 bp CCAGAGCTGTTATGTCTGTCACCAGCCCTGCAGGAATTATTCAGGAACCTGTGGCTCCAGCAGGCTGGGTaGATCGGCCGTCAGGTAGTA +
Preference number: 4 (lower is better)
Translates to: PELLCLSPALQELFRNLWLQQAG*IGRQVV
Trigger: TACTACCTGACGGCCGATTCACCCAGCCTGCTGGAG...CCACAGGTTCCTGAATAATTCCTGCAGGGCTGGTGACAGACATAACAGCTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR GCA 90 bp ACCTGTGGTACATGTGACTTGTTCGAGGTAGAAATGTCTCAGCTAGATCCCCAAGGAGGCCCGGTGGCCTaGACCTTCAGCAGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: TCGTCDLFEVEMSQLDPQGGPVA*TFSRLW
Trigger: CCAGAGCCTGCTGAAGGTGCAGGCCACCGGGCCTCC...TTGGGGATCTAGCTGAGACATTTCTACCTCGAACAAGTCACATGTACCACAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR GCA 90 bp GGGGAGCATCCTTGCAATGTTGCCCATTTTGTGGTCAACATATCTGCCAGGTGCTGGACACCACTTCCATaGGCGATGGCCTGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: GEHPCNVAHFVVNISARCWTPLP*AMAWLP
Trigger: GGGAAGCCAGGCCATCGCGCATGGAAGTGGTGTCCA...GCACCTGGCAGATATGTTGACCACAAAATGGGCAACATTGCAAGGATGCTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561370.5
CDS-3UTR GCA 90 bp GCTGAGGCAGGAGAATTGCTTGAACCCTGTGGACTGGGTGACATAGTGACACTGGTCCCGTTGGTAAAGTaGACGGGGATGCTGAAGGGC +
Preference number: 4 (lower is better)
Translates to: AEAGELLEPCGLGDIVTLVPLVK*TGMLKG
Trigger: GCCCTTCAGCATCCCCGTGCACTTTACCAACGGGAC...CAGTGTCACTATGTCACCCAGTCCACAGGGTTCAAGCAATTCTCCTGCCTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CCA 90 bp GCTGAGGCAGGAGAATTGCTTGAACCCTGTGGACTGGGTGACATAGTGACACTGTTCATGCATGGCTGGTaGGGAGGGCTCTCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: AEAGELLEPCGLGDIVTLFMHGW*GGLSLP
Trigger: GGGAAGAGAGAGCCCTCCCCACCAGCCATGCATGAA...CAGTGTCACTATGTCACCCAGTCCACAGGGTTCAAGCAATTCTCCTGCCTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CCA 90 bp TATGTCTGTCACCAGCCCTGCAGGAATTATTCAGGAACCTGTGGTACATGTGACTGGCCCACCTGGGGCTaGCTGTGGTGCCTTTTGGCC +
Preference number: 4 (lower is better)
Translates to: YVCHQPCRNYSGTCGTCDWPTWG*LWCLLA
Trigger: GGCCAAAAGGCACCACAGCCAGCCCCAGGTGGGCCA...GTCACATGTACCACAGGTTCCTGAATAATTCCTGCAGGGCTGGTGACAGACATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CCA 90 bp TGTACCCTCACCCTCAAACTAATTCCCAGCAGAAGTTTGCCAGAAGTCTCAAGGGGCCCAGCCCGTCGGTaGAGTAGGATGAGGTGCGCT +
Preference number: 4 (lower is better)
Translates to: CTLTLKLIPSRSLPEVSRGPARR*SRMRCA
Trigger: AGCGCACCTCATCCTACTCCACCGACGGGCTGGGCC...CCTTGAGACTTCTGGCAAACTTCTGCTGGGAATTAGTTTGAGGGTGAGGGTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CCA 90 bp GAGCAGCCATCCGGAAGATCAACTTCTCAATGTGGCTTTTTCCAGAGCTCTTGTCACTTCCATGCGCGATaGCCTGGCTTCCCGCTCCCC +
Preference number: 4 (lower is better)
Translates to: EQPSGRSTSQCGFFQSSCHFHAR*PGFPLP
Trigger: GGGGAGCGGGAAGCCAGGCCATCGCGCATGGAAGTG...ACAAGAGCTCTGGAAAAAGCCACATTGAGAAGTTGATCTTCCGGATGGCTGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561370.5
CDS-3UTR CCA 90 bp GCTGAGGCAGGAGAATTGCTTGAACCCTGTGGACTGGGTGACATAGTGACACTGCCAGAGCGTTCTCCTTaGAAGACAGCTGGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: AEAGELLEPCGLGDIVTLPERSP*KTAGQA
Trigger: AGCCTGCCCAGCTGTCTTCCAAGGAGAACGCTCTGG...CAGTGTCACTATGTCACCCAGTCCACAGGGTTCAAGCAATTCTCCTGCCTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CCA 90 bp GTTGCCCATTTTGTGGTCAACATATCTGCCAGGTGCCTCAGCTGTTCAGCGGGGGGTGTGGGCTCCTGTTaGTCTGGAGATCCTCTCAGA +
Preference number: 4 (lower is better)
Translates to: VAHFVVNISARCLSCSAGGVGSC*SGDPLR
Trigger: TCTGAGAGGATCTCCAGACCAACAGGAGCCCACACC...CCCCGCTGAACAGCTGAGGCACCTGGCAGATATGTTGACCACAAAATGGGCAAC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000561370.5
CDS-3UTR TCA 90 bp AAGTTTGCCAGAAGTCTCAAGGAGCATATCCAGGCCCACATGCCTGAAATAGTCCTCTGCAGCTCGGGGTaGACCAGGCAGACCTGCAGT +
Preference number: 4 (lower is better)
Translates to: KFARSLKEHIQAHMPEIVLCSSG*TRQTCS
Trigger: ACTGCAGGTCTGCCTGGTTCACCCCGAGCTGCAGAG...GACTATTTCAGGCATGTGGGCCTGGATATGCTCCTTGAGACTTCTGGCAAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR TCA 90 bp AGGAGAAGCTTACAGCAGCTGAGGTGTTCAGATAAACTAGTTCTGGCCTCGCAGATGAGGGAGTACTTCTaGGGTGGGCGGCAGCTGGTC +
Preference number: 4 (lower is better)
Translates to: RRSLQQLRCSDKLVLASQMREYF*GGRQLV
Trigger: GACCAGCTGCCGCCCACCTCAGAAGTACTCCCTCAT...CTGCGAGGCCAGAACTAGTTTATCTGAACACCTCAGCTGCTGTAAGCTTCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR TCA 90 bp ACAGAAGAAAAGAACTGTCGTCCATCCAGTTCCCACAGCTGGCAGGCTCCGGGTGTCTCCCCTTTGACTTaGCTGCGAAAGTACAGCCCT +
Preference number: 4 (lower is better)
Translates to: TEEKNCRPSSSHSWQAPGVSPLT*LRKYSP
Trigger: AGGGCTGTACTTTCGCAGTCAAGTCAAAGGGGAGAC...ACCCGGAGCCTGCCAGCTGTGGGAACTGGATGGACGACAGTTCTTTTCTTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561370.5
CDS-3UTR GCA 90 bp CCAGAGCTGTTATGTCTGTCACCAGCCCTGCAGGAATTATTCAGGAACCTGTGGACAGAGTCCTTGCTCTaGAGGGCACCTGGGGAAGGT +
Preference number: 4 (lower is better)
Translates to: PELLCLSPALQELFRNLWTESLL*RAPGEG
Trigger: ACCTTCCCCAGGTGCCCTGCAGAGCAAGGACTCTGT...CCACAGGTTCCTGAATAATTCCTGCAGGGCTGGTGACAGACATAACAGCTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR GCA 90 bp GCTGAGGCAGGAGAATTGCTTGAACCCTGTGGACTGGGTGACATAGTGACACTGTTCCTCATTCTTCCCTaGTGGGGGTGGCTCCTCCAT +
Preference number: 4 (lower is better)
Translates to: AEAGELLEPCGLGDIVTLFLILP*WGWLLH
Trigger: ATGGAGGAGCCACCCCCAGCAGGGAAGAATGAGGAA...CAGTGTCACTATGTCACCCAGTCCACAGGGTTCAAGCAATTCTCCTGCCTCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR GCA 90 bp GCTGAGGCAGGAGAATTGCTTGAACCCTGTGGACTGGGTGACATAGTGACACTGTATCTGAGAGCCGCATaGCCGATGTGGCCACAGCAT +
Preference number: 4 (lower is better)
Translates to: AEAGELLEPCGLGDIVTLYLRAA*PMWPQH
Trigger: ATGCTGTGGCCACATCGGGCATGCGGCTCTCAGATA...CAGTGTCACTATGTCACCCAGTCCACAGGGTTCAAGCAATTCTCCTGCCTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR GCA 90 bp TATGTCTGTCACCAGCCCTGCAGGAATTATTCAGGAACCTGTGGTACATGTGACTTGAGGGCCTCCGTCTaGAAGGCCTCAGAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: YVCHQPCRNYSGTCGTCDLRASV*KASEGR
Trigger: CCTGCCCTCTGAGGCCTTGCAGACGGAGGCCCTCAA...GTCACATGTACCACAGGTTCCTGAATAATTCCTGCAGGGCTGGTGACAGACATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR GCA 90 bp TGGGGCTTGGGAGCAGCCATCCGGAAGATCAACTTCTCAATGTGGCTTTTTCCAGTCCCGTTGGTAAAGTaGACGGGGATGCTGAAGGGC +
Preference number: 4 (lower is better)
Translates to: WGLGAAIRKINFSMWLFPVPLVK*TGMLKG
Trigger: GCCCTTCAGCATCCCCGTGCACTTTACCAACGGGAC...TGGAAAAAGCCACATTGAGAAGTTGATCTTCCGGATGGCTGCTCCCAAGCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000561370.5
CDS-3UTR GCA 90 bp AACAGAAGAAAAGAACTGTCGTCCATCCAGTTCCCACAGCTGGCAGGCTCCGGGTCAGACTTTCCGGGGTaGAGCTCCTTCATGGCTTGT +
Preference number: 4 (lower is better)
Translates to: NRRKELSSIQFPQLAGSGSDFPG*SSFMAC
Trigger: ACAAGCCATGAAGGAGCTGCACCCCGGAAAGTCTGA...CCCGGAGCCTGCCAGCTGTGGGAACTGGATGGACGACAGTTCTTTTCTTCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561370.5
CDS-3UTR GCA 90 bp CAGGTAGATGCGGATGCACTCAGGAGGGGAGCATCCTTGCAATGTTGCCCATTTTCAGGTAGATGCGGATaGACTCAGGAGGGGAGCATC +
Preference number: 4 (lower is better)
Translates to: QVDADALRRGASLQCCPFSGRCG*TQEGSI
Trigger: GATGCTCCCCTCCTGAGTGCATCCGCATCTACCTGA...AAATGGGCAACATTGCAAGGATGCTCCCCTCCTGAGTGCATCCGCATCTACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000561370.5
CDS-3UTR CCA 90 bp CATGTTATCCTGCAAAGACTGCCCCAGAAGGGGCTGTACCAATGCCTACATACCGGTTACGCAGCAGGATaGACACCACTTCCATGCGCG +
Preference number: 4 (lower is better)
Translates to: HVILQRLPQKGLYQCLHTGYAAG*TPLPCA
Trigger: CGCGCATGGAAGTGGTGTCCATCCTGCTGCGTAACC...GGTATGTAGGCATTGGTACAGCCCCTTCTGGGGCAGTCTTTGCAGGATAACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CCA 90 bp CCCATATTCTACCTGGGCCATCAGGGCAGCCATCTCAAGAGCCAATTCCTTGTTCTGAAGGGCAAGGAGTaGTGGAAGGGGTTACGCAGC +
Preference number: 4 (lower is better)
Translates to: PIFYLGHQGSHLKSQFLVLKGKE*WKGLRS
Trigger: GCTGCGTAACCCCTTCCACCACTCCTTGCCCTTCAG...AACAAGGAATTGGCTCTTGAGATGGCTGCCCTGATGGCCCAGGTAGAATATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561370.5
CDS-3UTR CCA 90 bp AACAGAAGAAAAGAACTGTCGTCCATCCAGTTCCCACAGCTGGCAGGCTCCGGGCATGTCTATAGCGCCTaGGGTGGAACCTGTCTAGGA +
Preference number: 4 (lower is better)
Translates to: NRRKELSSIQFPQLAGSGHVYSA*GGTCLG
Trigger: TCCTAGACAGGTTCCACCCCAGGCGCTATAGACATG...CCCGGAGCCTGCCAGCTGTGGGAACTGGATGGACGACAGTTCTTTTCTTCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561370.5
CDS-3UTR CCA 90 bp CCAGAGGCACTAGTGGTGTTGGGGAATCGGGTAGGAGAAATATTCACAGCAACGCCAGAGCGTTCTCCTTaGAAGACAGCTGGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: PEALVVLGNRVGEIFTATPERSP*KTAGQA
Trigger: AGCCTGCCCAGCTGTCTTCCAAGGAGAACGCTCTGG...CGTTGCTGTGAATATTTCTCCTACCCGATTCCCCAACACCACTAGTGCCTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561057.1
ENST00000561370.5
CDS-3UTR CCA 90 bp GAGCTCTTGTCTGGGATAGATCTAATCACAAGCATGAAGTCATCCCTGCAGCCATCCAGTTCCCACAGCTaGCAGGCTCCGGGTGGGTTG +
Preference number: 4 (lower is better)
Translates to: ELLSGIDLITSMKSSLQPSSSHS*QAPGGL
Trigger: CAACCCACCCGGAGCCTGCCAGCTGTGGGAACTGGA...TGGCTGCAGGGATGACTTCATGCTTGTGATTAGATCTATCCCAGACAAGAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561057.1
ENST00000561370.5
CDS-3UTR CCA 90 bp ACGCCATCCTCATTCACAGCAATCCACACCAGAGCGTTCTCCTTGGAAGACAGCGGGCTCCTGTTGGTCTaGAGATCCTCTCAGATGCAC +
Preference number: 4 (lower is better)
Translates to: TPSSFTAIHTRAFSLEDSGLLLV*RSSQMH
Trigger: GTGCATCTGAGAGGATCTCCAGACCAACAGGAGCCC...GCTGTCTTCCAAGGAGAACGCTCTGGTGTGGATTGCTGTGAATGAGGATGGCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561370.5
CDS-3UTR CCA 90 bp TTCTACCTGGGCCATCAGGGCAGCCATCTCAAGAGCCAATTCCTTGTTGATAGGTGTTCAGAGGCCCAGTaGTGTGGGCTCCTGTTGGTC +
Preference number: 4 (lower is better)
Translates to: FYLGHQGSHLKSQFLVDRCSEAQ*CGLLLV
Trigger: GACCAACAGGAGCCCACACCACTGGGCCTCTGAACA...CCTATCAACAAGGAATTGGCTCTTGAGATGGCTGCCCTGATGGCCCAGGTAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561370.5
3UTR CAA 72 bp GTCAGATTGGACCTACCTCCTGCCCTTGCTTGCACATaGCGTGGTACTGGGTTTGGCCTAAAGTCCAGTGTG +
Preference number: 4 (lower is better)
Translates to: VRLDLPPALACT*RGTGFGLKSSV
Trigger: CACACTGGACTTTAGGCCAAACCCAGTACCACGCAATGTGCAAGCAAGGGCAGGAGGTAGGTCCAATCTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329153.10
3UTR CAA 72 bp TGCGGATGCACTCAGGAGGGGAGCATCCTTGCAATGTaGCCCATTTTGTGGTCAACATATCTGCCAGGTGCC +
Preference number: 4 (lower is better)
Translates to: CGCTQEGSILAM*PILWSTYLPGA
Trigger: GGCACCTGGCAGATATGTTGACCACAAAATGGGCAACATTGCAAGGATGCTCCCCTCCTGAGTGCATCCGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561370.5
CDS-3UTR TCA 90 bp TCTACCTGGGCCATCAGGGCAGCCATCTCAAGAGCCAATTCCTTGTTGATAGGATGTGGTCCAGGATGCTaGCGCCATCCTCATTCACAG +
Preference number: 4 (lower is better)
Translates to: STWAIRAAISRANSLLIGCGPGC*RHPHSQ
Trigger: CTGTGAATGAGGATGGCGTCAGCATCCTGGACCACA...TCCTATCAACAAGGAATTGGCTCTTGAGATGGCTGCCCTGATGGCCCAGGTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561370.5
CDS-3UTR GCA 90 bp GTATCATACCCTAGGATATATATCTCTAAATCCAGAGGCACTAGTGGTGTTGGGCAGGGTCCGCTCCACTaGCCGCTGGCAGTAGGTGGC +
Preference number: 4 (lower is better)
Translates to: VSYPRIYISKSRGTSGVGQGPLH*PLAVGG
Trigger: GCCACCTACTGCCAGCGGGCAGTGGAGCGGACCCTG...CCCAACACCACTAGTGCCTCTGGATTTAGAGATATATATCCTAGGGTATGATAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329153.10
ENST00000561370.5
CDS-3UTR GCA 90 bp CCCATATTCTACCTGGGCCATCAGGGCAGCCATCTCAAGAGCCAATTCCTTGTTATCTTGACACTTCCCTaGAGGCAGTGCTCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: PIFYLGHQGSHLKSQFLVILTLP*RQCSRS
Trigger: GGACCTGGAGCACTGCCTGCAGGGAAGTGTCAAGAT...AACAAGGAATTGGCTCTTGAGATGGCTGCCCTGATGGCCCAGGTAGAATATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561370.5
CDS-3UTR GCA 90 bp GTTGCCCATTTTGTGGTCAACATATCTGCCAGGTGCCTCAGCTGTTCAGCGGGGTGTGGTCAACATATCTaGCAGGTGCCTCAGCTGTTC +
Preference number: 4 (lower is better)
Translates to: VAHFVVNISARCLSCSAGCGQHI*QVPQLF
Trigger: GAACAGCTGAGGCACCTGGCAGATATGTTGACCACA...CCCCGCTGAACAGCTGAGGCACCTGGCAGATATGTTGACCACAAAATGGGCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561370.5
CDS-3UTR GCA 90 bp TGCACTCAGGAGGGGAGCATCCTTGCAATGTTGCCCATTTTGTGGTCAACATATCCACGGTCAGGTAGATaGGGATGCACTCAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: CTQEGSILAMLPILWSTYPRSGR*GCTQEG
Trigger: CCCCTCCTGAGTGCATCCGCATCTACCTGACCGTGG...ATATGTTGACCACAAAATGGGCAACATTGCAAGGATGCTCCCCTCCTGAGTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561370.5
CDS-3UTR CCA 90 bp AAGTTTGCCAGAAGTCTCAAGGAGCATATCCAGGCCCACATGCCTGAAATAGTCTCCTGGCCCATAGGCTaGATTCCCGGCTCTGAAGGG +
Preference number: 4 (lower is better)
Translates to: KFARSLKEHIQAHMPEIVSWPIG*IPGSEG
Trigger: CCCTTCAGAGCCGGGAATCCAGCCTATGGGCCAGGA...GACTATTTCAGGCATGTGGGCCTGGATATGCTCCTTGAGACTTCTGGCAAACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CCA 90 bp AAACCAGAGCTGTTATGTCTGTCACCAGCCCTGCAGGAATTATTCAGGAACCTGGGCTGCCTAGTCCGCTaGTCTTCCTGGACTCAGAGG +
Preference number: 4 (lower is better)
Translates to: KPELLCLSPALQELFRNLGCLVR*SSWTQR
Trigger: CCTCTGAGTCCAGGAAGACCAGCGGACTAGGCAGCC...CAGGTTCCTGAATAATTCCTGCAGGGCTGGTGACAGACATAACAGCTCTGGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CCA 90 bp AGGAGAAGCTTACAGCAGCTGAGGTGTTCAGATAAACTAGTTCTGGCCTCGCAGGGCCATGCTTTACCTTaGTCAGCCAGCCCTTCACGG +
Preference number: 4 (lower is better)
Translates to: RRSLQQLRCSDKLVLASQGHALP*SASPSR
Trigger: CCGTGAAGGGCTGGCTGACCAAGGTAAAGCATGGCC...CTGCGAGGCCAGAACTAGTTTATCTGAACACCTCAGCTGCTGTAAGCTTCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CCA 90 bp ATGTTGCCCATTTTGTGGTCAACATATCTGCCAGGTGCCTCAGCTGTTCAGCGGTCCTGGTTCAGCCGCTaGAGGAACTCATCAACCGTG +
Preference number: 4 (lower is better)
Translates to: MLPILWSTYLPGASAVQRSWFSR*RNSSTV
Trigger: CACGGTTGATGAGTTCCTCCAGCGGCTGAACCAGGA...CCGCTGAACAGCTGAGGCACCTGGCAGATATGTTGACCACAAAATGGGCAACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561370.5
CDS-3UTR CCA 90 bp GCTGAGGCAGGAGAATTGCTTGAACCCTGTGGACTGGGTGACATAGTGACACTGCATGTCTATAGCGCCTaGGGTGGAACCTGTCTAGGA +
Preference number: 4 (lower is better)
Translates to: AEAGELLEPCGLGDIVTLHVYSA*GGTCLG
Trigger: TCCTAGACAGGTTCCACCCCAGGCGCTATAGACATG...CAGTGTCACTATGTCACCCAGTCCACAGGGTTCAAGCAATTCTCCTGCCTCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR TCA 90 bp TCTGGGATAGATCTAATCACAAGCATGAAGTCATCCCTGCAGCCACCAAACGTTCCGAGGGATCGTCCGTaGAGAGGGCAAAGCCAGAGT +
Preference number: 4 (lower is better)
Translates to: SGIDLITSMKSSLQPPNVPRDRP*RGQSQS
Trigger: ACTCTGGCTTTGCCCTCTTCACGGACGATCCCTCGG...AACGTTTGGTGGCTGCAGGGATGACTTCATGCTTGTGATTAGATCTATCCCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561370.5
CDS-3UTR TCA 90 bp ATGTTGCCCATTTTGTGGTCAACATATCTGCCAGGTGCCTCAGCTGTTCAGCGGGACAGCTGGGCAGGCTaGGCAGCAAAAAGTTTAGCA +
Preference number: 4 (lower is better)
Translates to: MLPILWSTYLPGASAVQRDSWAG*AAKSLA
Trigger: TGCTAAACTTTTTGCTGCTCAGCCTGCCCAGCTGTC...CCGCTGAACAGCTGAGGCACCTGGCAGATATGTTGACCACAAAATGGGCAACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561370.5
CDS-3UTR TCA 90 bp AGGAGAAGCTTACAGCAGCTGAGGTGTTCAGATAAACTAGTTCTGGCCTCGCAGTGTGGTCCAGGATGCTaGCGCCATCCTCATTCACAG +
Preference number: 4 (lower is better)
Translates to: RRSLQQLRCSDKLVLASQCGPGC*RHPHSQ
Trigger: CTGTGAATGAGGATGGCGTCAGCATCCTGGACCACA...CTGCGAGGCCAGAACTAGTTTATCTGAACACCTCAGCTGCTGTAAGCTTCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR TCA 90 bp AGCACTGATGCCCTCAGTAACAGTGGATCATCCCTGTCTATGTCTAGAATCAGGAGTGGGCAGATCACCTaGGGTCAGGAGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: STDALSNSGSSLSMSRIRSGQIT*GQEFET
Trigger: GGTCTCGAACTCCTGACCTCAGGTGATCTGCCCACT...CCTGATTCTAGACATAGACAGGGATGATCCACTGTTACTGAGGGCATCAGTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR GCA 90 bp AGCACTGATGCCCTCAGTAACAGTGGATCATCCCTGTCTATGTCTAGAATCAGGCTCTGCTCCAGCTCCTaGATCTTGTCAGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: STDALSNSGSSLSMSRIRLCSSS*ILSASS
Trigger: GCTGCTGGCTGACAAGATGCAGGAGCTGGAGCAGAG...CCTGATTCTAGACATAGACAGGGATGATCCACTGTTACTGAGGGCATCAGTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR GCA 90 bp AAGTTTGCCAGAAGTCTCAAGGAGCATATCCAGGCCCACATGCCTGAAATAGTCGGTCTCAGCGTTCTCTaGTCTCTGCTCTGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: KFARSLKEHIQAHMPEIVGLSVL*SLLCLQ
Trigger: CTGGAGGCAGAGCAGAGAGCAGAGAACGCTGAGACC...GACTATTTCAGGCATGTGGGCCTGGATATGCTCCTTGAGACTTCTGGCAAACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR GCA 90 bp AAACCAGAGCTGTTATGTCTGTCACCAGCCCTGCAGGAATTATTCAGGAACCTGGGTGGATCACCAGGGTaGAGTGGGAGGAAAGCAACC +
Preference number: 4 (lower is better)
Translates to: KPELLCLSPALQELFRNLGGSPG*SGRKAT
Trigger: GGTTGCTTTCCTCCCACTGCACCCTGGTGATCCACC...CAGGTTCCTGAATAATTCCTGCAGGGCTGGTGACAGACATAACAGCTCTGGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR GCA 90 bp TTCTACCTGGGCCATCAGGGCAGCCATCTCAAGAGCCAATTCCTTGTTGATAGGGGGATGGCTTTCTCATaGCTATCTCCTGGTTCAGCC +
Preference number: 4 (lower is better)
Translates to: FYLGHQGSHLKSQFLVDRGMAFS*LSPGSA
Trigger: GGCTGAACCAGGAGATAGGCATGAGAAAGCCATCCC...CCTATCAACAAGGAATTGGCTCTTGAGATGGCTGCCCTGATGGCCCAGGTAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561370.5
CDS-3UTR GCA 90 bp AGGAGAAGCTTACAGCAGCTGAGGTGTTCAGATAAACTAGTTCTGGCCTCGCAGATCTTGACACTTCCCTaGAGGCAGTGCTCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: RRSLQQLRCSDKLVLASQILTLP*RQCSRS
Trigger: GGACCTGGAGCACTGCCTGCAGGGAAGTGTCAAGAT...CTGCGAGGCCAGAACTAGTTTATCTGAACACCTCAGCTGCTGTAAGCTTCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR GCA 90 bp AACAGAAGAAAAGAACTGTCGTCCATCCAGTTCCCACAGCTGGCAGGCTCCGGGGATAGGAAACCTCCCTaGCACTATCTCTCTACTGGT +
Preference number: 4 (lower is better)
Translates to: NRRKELSSIQFPQLAGSGDRKPP*HYLSTG
Trigger: ACCAGTAGAGAGATAGTGGCAGGGAGGTTTCCTATC...CCCGGAGCCTGCCAGCTGTGGGAACTGGATGGACGACAGTTCTTTTCTTCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561370.5
CDS-3UTR GCA 90 bp TATGTCTGTCACCAGCCCTGCAGGAATTATTCAGGAACCTGTGGTACATGTGACCCTCCTGCCCTTGCTTaGACATTGCGTGGTACTGGG +
Preference number: 4 (lower is better)
Translates to: YVCHQPCRNYSGTCGTCDPPALA*TLRGTG
Trigger: CCCAGTACCACGCAATGTGCAAGCAAGGGCAGGAGG...GTCACATGTACCACAGGTTCCTGAATAATTCCTGCAGGGCTGGTGACAGACATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CCA 90 bp ATAAAACCAGAGCTGTTATGTCTGTCACCAGCCCTGCAGGAATTATTCAGGAACGCTCTGCAGGGCACCTaGGGAAGGTGCAAGCACAGC +
Preference number: 4 (lower is better)
Translates to: IKPELLCLSPALQELFRNALQGT*GRCKHS
Trigger: GCTGTGCTTGCACCTTCCCCAGGTGCCCTGCAGAGC...GTTCCTGAATAATTCCTGCAGGGCTGGTGACAGACATAACAGCTCTGGTTTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CCA 90 bp CTTAGAGATACCCAAGATATTATAAAACCAGAGCTGTTATGTCTGTCACCAGCCGAGCTGGAGGCCCGGTaGCCTGCACCTTCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: LRDTQDIIKPELLCLSPAELEAR*PAPSAG
Trigger: GCCTGCTGAAGGTGCAGGCCACCGGGCCTCCAGCTC...GGCTGGTGACAGACATAACAGCTCTGGTTTTATAATATCTTGGGTATCTCTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CCA 90 bp ATATCTCTAAATCCAGAGGCACTAGTGGTGTTGGGGAATCGGGTAGGAGAAATATGCTGTAGCACAGCATaGGGTGCCTCCAGAGCGGCG +
Preference number: 4 (lower is better)
Translates to: ISLNPEALVVLGNRVGEICCSTA*GASRAA
Trigger: CGCCGCTCTGGAGGCACCCCATGCTGTGCTACAGCA...TATTTCTCCTACCCGATTCCCCAACACCACTAGTGCCTCTGGATTTAGAGATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CCA 90 bp GTTGCCCATTTTGTGGTCAACATATCTGCCAGGTGCCTCAGCTGTTCAGCGGGGGGAACTCATCAACCGTaGAAGAGCCGTCAAAACCAA +
Preference number: 4 (lower is better)
Translates to: VAHFVVNISARCLSCSAGGTHQP*KSRQNQ
Trigger: TTGGTTTTGACGGCTCTTCCACGGTTGATGAGTTCC...CCCCGCTGAACAGCTGAGGCACCTGGCAGATATGTTGACCACAAAATGGGCAAC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000561370.5
CDS-3UTR CCA 90 bp AGGAGAAGCTTACAGCAGCTGAGGTGTTCAGATAAACTAGTTCTGGCCTCGCAGTCCCCATATTCTACCTaGGCCATCAGGGCAGCCATC +
Preference number: 4 (lower is better)
Translates to: RRSLQQLRCSDKLVLASQSPYST*AIRAAI
Trigger: GATGGCTGCCCTGATGGCCCAGGTAGAATATGGGGA...CTGCGAGGCCAGAACTAGTTTATCTGAACACCTCAGCTGCTGTAAGCTTCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CCA 90 bp GAGCAGCCATCCGGAAGATCAACTTCTCAATGTGGCTTTTTCCAGAGCTCTTGTCCAGAGCGTTCTCCTTaGAAGACAGCTGGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: EQPSGRSTSQCGFFQSSCPERSP*KTAGQA
Trigger: AGCCTGCCCAGCTGTCTTCCAAGGAGAACGCTCTGG...ACAAGAGCTCTGGAAAAAGCCACATTGAGAAGTTGATCTTCCGGATGGCTGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561057.1
ENST00000561370.5
CDS-3UTR CCA 90 bp GTGGTGTTGGGGAATCGGGTAGGAGAAATATTCACAGCAACGTTGGCCCCTTGGACTTGCATAGTGTTGTaGTCCAGGATGCTGACGCCA +
Preference number: 4 (lower is better)
Translates to: VVLGNRVGEIFTATLAPWTCIVL*SRMLTP
Trigger: TGGCGTCAGCATCCTGGACCACAACACTATGCAAGT...CCAAGGGGCCAACGTTGCTGTGAATATTTCTCCTACCCGATTCCCCAACACCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561370.5
CDS-3UTR CCA 90 bp TCAGGAACCTGTGGTACATGTGACTTGTTCGAGGTAGAAATGTCTCAGCTAGATTCCAGTTCCCACAGCTaGCAGGCTCCGGGTGGGTTG +
Preference number: 4 (lower is better)
Translates to: SGTCGTCDLFEVEMSQLDSSSHS*QAPGGL
Trigger: CAACCCACCCGGAGCCTGCCAGCTGTGGGAACTGGA...ATCTAGCTGAGACATTTCTACCTCGAACAAGTCACATGTACCACAGGTTCCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329153.10
ENST00000559168.1
CDS-3UTR CCA 90 bp GAGCTCTTGTCTGGGATAGATCTAATCACAAGCATGAAGTCATCCCTGCAGCCACATGATGCTGGGGCTTaGGAGCAGCCATCCGGAAGA +
Preference number: 4 (lower is better)
Translates to: ELLSGIDLITSMKSSLQPHDAGA*EQPSGR
Trigger: TCTTCCGGATGGCTGCTCCCAAGCCCCAGCATCATG...TGGCTGCAGGGATGACTTCATGCTTGTGATTAGATCTATCCCAGACAAGAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561370.5
CDS-3UTR TCA 90 bp CTTAGAGATACCCAAGATATTATAAAACCAGAGCTGTTATGTCTGTCACCAGCCCCGGCTCTCCCAGGATaGAAACTGGTGCAGCGGGGG +
Preference number: 4 (lower is better)
Translates to: LRDTQDIIKPELLCLSPAPALPG*KLVQRG
Trigger: CCCCCGCTGCACCAGTTTTCATCCTGGGAGAGCCGG...GGCTGGTGACAGACATAACAGCTCTGGTTTTATAATATCTTGGGTATCTCTAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR TCA 90 bp ATAAAACCAGAGCTGTTATGTCTGTCACCAGCCCTGCAGGAATTATTCAGGAACACCCTCGGAGCTCAGTaGGGACATGGAGACGCCTCT +
Preference number: 4 (lower is better)
Translates to: IKPELLCLSPALQELFRNTLGAQ*GHGDAS
Trigger: AGAGGCGTCTCCATGTCCTCACTGAGCTCCGAGGGT...GTTCCTGAATAATTCCTGCAGGGCTGGTGACAGACATAACAGCTCTGGTTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR TCA 90 bp GAGCAGCCATCCGGAAGATCAACTTCTCAATGTGGCTTTTTCCAGAGCTCTTGTTGCACAGTGCCCTTCTaGGAAAAGGAGGCCCAGTGT +
Preference number: 4 (lower is better)
Translates to: EQPSGRSTSQCGFFQSSCCTVPF*EKEAQC
Trigger: ACACTGGGCCTCCTTTTCTCAGAAGGGCACTGTGCA...ACAAGAGCTCTGGAAAAAGCCACATTGAGAAGTTGATCTTCCGGATGGCTGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561370.5
CDS-3UTR GCA 90 bp CCAGAGCTGTTATGTCTGTCACCAGCCCTGCAGGAATTATTCAGGAACCTGTGGCTCCAAGGGGCTTGCTaGTTCAGAAACAGAGTCCTT +
Preference number: 4 (lower is better)
Translates to: PELLCLSPALQELFRNLWLQGAC*FRNRVL
Trigger: AAGGACTCTGTTTCTGAAGCAGCAAGCCCCTTGGAG...CCACAGGTTCCTGAATAATTCCTGCAGGGCTGGTGACAGACATAACAGCTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR GCA 90 bp TATTATAAAACCAGAGCTGTTATGTCTGTCACCAGCCCTGCAGGAATTATTCAGACCACACGGCCAAAGTaGCCATGGCCCACCTGGGGC +
Preference number: 4 (lower is better)
Translates to: YYKTRAVMSVTSPAGIIQTTRPK*PWPTWG
Trigger: GCCCCAGGTGGGCCATGGGCACTTTGGCCGTGTGGT...CTGAATAATTCCTGCAGGGCTGGTGACAGACATAACAGCTCTGGTTTTATAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR GCA 90 bp TATGTCTGTCACCAGCCCTGCAGGAATTATTCAGGAACCTGTGGTACATGTGACTCTACTTCCTCTATGTaGGCATCCCGCACAGGCAGG +
Preference number: 4 (lower is better)
Translates to: YVCHQPCRNYSGTCGTCDSTSSM*ASRTGR
Trigger: CCTGCCTGTGCGGGATGCGCACATAGAGGAAGTAGA...GTCACATGTACCACAGGTTCCTGAATAATTCCTGCAGGGCTGGTGACAGACATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR GCA 90 bp GAGCAGCCATCCGGAAGATCAACTTCTCAATGTGGCTTTTTCCAGAGCTCTTGTGCATGGCGTTGGAGCTaGTGCTTGACATACCAGAGG +
Preference number: 4 (lower is better)
Translates to: EQPSGRSTSQCGFFQSSCAWRWS*CLTYQR
Trigger: CCTCTGGTATGTCAAGCAGCAGCTCCAACGCCATGC...ACAAGAGCTCTGGAAAAAGCCACATTGAGAAGTTGATCTTCCGGATGGCTGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561370.5
CDS-3UTR GCA 90 bp GGTAGGAGAAATATTCACAGCAACGTTGGCCCCTTGGTAGCACAGGAAACAGAACCCTGCCTTGAGGACTaGTGCAAGGAAGAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: GRRNIHSNVGPLVAQETEPCLED*CKEEKS
Trigger: GCTCTTCTCTTCCTTGCAGCAGTCCTCAAGGCAGGG...TTCTGTTTCCTGTGCTACCAAGGGGCCAACGTTGCTGTGAATATTTCTCCTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561370.5
CDS-3UTR CCA 90 bp ACCTGTGGTACATGTGACTTGTTCGAGGTAGAAATGTCTCAGCTAGATCCCCAAGGCTGTGGTGCCTTTTaGCCAACTGGATGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: TCGTCDLFEVEMSQLDPQGCGAF*PTGCCP
Trigger: GGGACAGCATCCAGTTGGCCAAAAGGCACCACAGCC...TTGGGGATCTAGCTGAGACATTTCTACCTCGAACAAGTCACATGTACCACAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CCA 90 bp TATATATCTCTAAATCCAGAGGCACTAGTGGTGTTGGGGAATCGGGTAGGAGAAACTCCTCCAGCAGGCTaGGTGAATCGGCCGTCAGGT +
Preference number: 4 (lower is better)
Translates to: YISLNPEALVVLGNRVGETPPAG*VNRPSG
Trigger: ACCTGACGGCCGATTCACCCAGCCTGCTGGAGGAGT...TTCTCCTACCCGATTCCCCAACACCACTAGTGCCTCTGGATTTAGAGATATATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CCA 90 bp CCAAGATATTATAAAACCAGAGCTGTTATGTCTGTCACCAGCCCTGCAGGAATTCCTTCACGGTGGGCTTaGTGCCACCCCGAAGCAGAG +
Preference number: 4 (lower is better)
Translates to: PRYYKTRAVMSVTSPAGIPSRWA*CHPEAE
Trigger: CTCTGCTTCGGGGTGGCACCAAGCCCACCGTGAAGG...AATTCCTGCAGGGCTGGTGACAGACATAACAGCTCTGGTTTTATAATATCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CCA 90 bp CCAGAGCTCTTGTCTGGGATAGATCTAATCACAAGCATGAAGTCATCCCTGCAGCTTCTGGGATCTGCATaGCGTTGGAGCTGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: PELLSGIDLITSMKSSLQLLGSA*RWSCCL
Trigger: CAAGCAGCAGCTCCAACGCCATGCAGATCCCAGAAG...CTGCAGGGATGACTTCATGCTTGTGATTAGATCTATCCCAGACAAGAGCTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561370.5
CDS-3UTR CCA 90 bp CTAAATCCAGAGGCACTAGTGGTGTTGGGGAATCGGGTAGGAGAAATATTCACAGGTTACGCAGCAGGATaGACACCACTTCCATGCGCG +
Preference number: 4 (lower is better)
Translates to: LNPEALVVLGNRVGEIFTGYAAG*TPLPCA
Trigger: CGCGCATGGAAGTGGTGTCCATCCTGCTGCGTAACC...TGTGAATATTTCTCCTACCCGATTCCCCAACACCACTAGTGCCTCTGGATTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561370.5
CDS-3UTR CCA 90 bp ACCTGTGGTACATGTGACTTGTTCGAGGTAGAAATGTCTCAGCTAGATCCCCAAAAGGGCAAGGAGTGGTaGAAGGGGTTACGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: TCGTCDLFEVEMSQLDPQKGKEW*KGLRSR
Trigger: CCTGCTGCGTAACCCCTTCCACCACTCCTTGCCCTT...TTGGGGATCTAGCTGAGACATTTCTACCTCGAACAAGTCACATGTACCACAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CCA 90 bp CTAAATCCAGAGGCACTAGTGGTGTTGGGGAATCGGGTAGGAGAAATATTCACAAAGGGCAAGGAGTGGTaGAAGGGGTTACGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: LNPEALVVLGNRVGEIFTKGKEW*KGLRSR
Trigger: CCTGCTGCGTAACCCCTTCCACCACTCCTTGCCCTT...TGTGAATATTTCTCCTACCCGATTCCCCAACACCACTAGTGCCTCTGGATTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561370.5
CDS-3UTR CCA 90 bp TGCACTCAGGAGGGGAGCATCCTTGCAATGTTGCCCATTTTGTGGTCAACATATCTCATGCCTATCTCCTaGTTCAGCCGCTGGAGGAAC +
Preference number: 4 (lower is better)
Translates to: CTQEGSILAMLPILWSTYLMPIS*FSRWRN
Trigger: GTTCCTCCAGCGGCTGAACCAGGAGATAGGCATGAG...ATATGTTGACCACAAAATGGGCAACATTGCAAGGATGCTCCCCTCCTGAGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561370.5
CDS-3UTR CCA 90 bp TGGGATAGATCTAATCACAAGCATGAAGTCATCCCTGCAGCCACCAAACGTTGTGAAGATGCTGAGCCTTaGCAGGGGATGTGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: WDRSNHKHEVIPAATKRCEDAEP*QGMCLQ
Trigger: CTGGAGGCACATCCCCTGCCAAGGCTCAGCATCTTC...ACAACGTTTGGTGGCTGCAGGGATGACTTCATGCTTGTGATTAGATCTATCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561370.5
CDS-3UTR CCA 90 bp AGCAACGTTGGCCCCTTGGTAGCACAGGAAACAGAAGAAAAGAACTGTCGTCCAAGAAAGGCCATTTCCTaGCCACGGTCAGGTAGATGC +
Preference number: 4 (lower is better)
Translates to: SNVGPLVAQETEEKNCRPRKAIS*PRSGRC
Trigger: GCATCTACCTGACCGTGGCCAGGAAATGGCCTTTCT...TGGACGACAGTTCTTTTCTTCTGTTTCCTGTGCTACCAAGGGGCCAACGTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561370.5
3UTR CAA 72 bp TGTCCAGTCATTAAAATGAGACAGGGAGGGGTCAGATaGGACCTACCTCCTGCCCTTGCTTGCACATTGCGT +
Preference number: 4 (lower is better)
Translates to: CPVIKMRQGGVR*DLPPALACTLR
Trigger: ACGCAATGTGCAAGCAAGGGCAGGAGGTAGGTCCAATCTGACCCCTCCCTGTCTCATTTTAATGACTGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329153.10
3UTR CAA 72 bp ACTCAGGAGGGGAGCATCCTTGCAATGTTGCCCATTTaGTGGTCAACATATCTGCCAGGTGCCTCAGCTGTT +
Preference number: 4 (lower is better)
Translates to: TQEGSILAMLPI*WSTYLPGASAV
Trigger: AACAGCTGAGGCACCTGGCAGATATGTTGACCACAAAATGGGCAACATTGCAAGGATGCTCCCCTCCTGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561370.5
CDS-3UTR TCA 90 bp AAACCAGAGCTGTTATGTCTGTCACCAGCCCTGCAGGAATTATTCAGGAACCTGTGCTCCACCAGGCGCTaGTTATGGCTTTTCAGATGC +
Preference number: 4 (lower is better)
Translates to: KPELLCLSPALQELFRNLCSTRR*LWLFRC
Trigger: GCATCTGAAAAGCCATAATCAGCGCCTGGTGGAGCA...CAGGTTCCTGAATAATTCCTGCAGGGCTGGTGACAGACATAACAGCTCTGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR TCA 90 bp ATATCTCTAAATCCAGAGGCACTAGTGGTGTTGGGGAATCGGGTAGGAGAAATAGCTTCTAGCGCATCTTaGAGGGATCCCACCTGCTCC +
Preference number: 4 (lower is better)
Translates to: ISLNPEALVVLGNRVGEIASSAS*RDPTCS
Trigger: GGAGCAGGTGGGATCCCTTCAAGATGCGCTAGAAGC...TATTTCTCCTACCCGATTCCCCAACACCACTAGTGCCTCTGGATTTAGAGATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR TCA 90 bp ATATCTCTAAATCCAGAGGCACTAGTGGTGTTGGGGAATCGGGTAGGAGAAATAGGGAGCATCCCTCTCTaGGCAGTAACCAGACCCTCA +
Preference number: 4 (lower is better)
Translates to: ISLNPEALVVLGNRVGEIGSIPL*AVTRPS
Trigger: TGAGGGTCTGGTTACTGCTCAGAGAGGGATGCTCCC...TATTTCTCCTACCCGATTCCCCAACACCACTAGTGCCTCTGGATTTAGAGATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR TCA 90 bp CCAAGATATTATAAAACCAGAGCTGTTATGTCTGTCACCAGCCCTGCAGGAATTAGTGCACGGGGATGCTaGAGGGCAAGGAGTGGTGGA +
Preference number: 4 (lower is better)
Translates to: PRYYKTRAVMSVTSPAGISARGC*RARSGG
Trigger: TCCACCACTCCTTGCCCTTCAGCATCCCCGTGCACT...AATTCCTGCAGGGCTGGTGACAGACATAACAGCTCTGGTTTTATAATATCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR TCA 90 bp AAACCAGAGCTGTTATGTCTGTCACCAGCCCTGCAGGAATTATTCAGGAACCTGATCTCTCTACTGGTTTaGGAGGCAAGGAGCAGCCGT +
Preference number: 4 (lower is better)
Translates to: KPELLCLSPALQELFRNLISLLV*EARSSR
Trigger: ACGGCTGCTCCTTGCCTCTCAAACCAGTAGAGAGAT...CAGGTTCCTGAATAATTCCTGCAGGGCTGGTGACAGACATAACAGCTCTGGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR TCA 90 bp GCTGAGGCAGGAGAATTGCTTGAACCCTGTGGACTGGGTGACATAGTGACACTGGTGGGGGAAATAGATTaGCCCCAAATTCAGTGTGAA +
Preference number: 4 (lower is better)
Translates to: AEAGELLEPCGLGDIVTLVGEID*PQIQCE
Trigger: TTCACACTGAATTTGGGGTCAATCTATTTCCCCCAC...CAGTGTCACTATGTCACCCAGTCCACAGGGTTCAAGCAATTCTCCTGCCTCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR GCA 90 bp TCAGGAACCTGTGGTACATGTGACTTGTTCGAGGTAGAAATGTCTCAGCTAGATTTGGTAGGGTCAGACTaGTGCCAGGACCACCTTCCC +
Preference number: 4 (lower is better)
Translates to: SGTCGTCDLFEVEMSQLDLVGSD*CQDHLP
Trigger: GGGAAGGTGGTCCTGGCAGCAGTCTGACCCTACCAA...ATCTAGCTGAGACATTTCTACCTCGAACAAGTCACATGTACCACAGGTTCCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR GCA 90 bp AGCACTGATGCCCTCAGTAACAGTGGATCATCCCTGTCTATGTCTAGAATCAGGACCTTGGAGTGGCCATaGTTTACCTTGGTCAGCCAG +
Preference number: 4 (lower is better)
Translates to: STDALSNSGSSLSMSRIRTLEWP*FTLVSQ
Trigger: CTGGCTGACCAAGGTAAAGCATGGCCACTCCAAGGT...CCTGATTCTAGACATAGACAGGGATGATCCACTGTTACTGAGGGCATCAGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR GCA 90 bp AAACCAGAGCTGTTATGTCTGTCACCAGCCCTGCAGGAATTATTCAGGAACCTGCGTATAGGCCGTCTTTaGTGTAGCACAGCATGGGGT +
Preference number: 4 (lower is better)
Translates to: KPELLCLSPALQELFRNLRIGRL*CSTAWG
Trigger: ACCCCATGCTGTGCTACAGCAAAGACGGCCTATACG...CAGGTTCCTGAATAATTCCTGCAGGGCTGGTGACAGACATAACAGCTCTGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR GCA 90 bp AAACCAGAGCTGTTATGTCTGTCACCAGCCCTGCAGGAATTATTCAGGAACCTGTTCACTTCTGGGATCTaGATGGCGTTGGAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: KPELLCLSPALQELFRNLFTSGI*MALELL
Trigger: CAGCAGCTCCAACGCCATGCAGATCCCAGAAGTGAA...CAGGTTCCTGAATAATTCCTGCAGGGCTGGTGACAGACATAACAGCTCTGGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR GCA 90 bp AGCACTGATGCCCTCAGTAACAGTGGATCATCCCTGTCTATGTCTAGAATCAGGGGGATGGCTTTCTCATaGCTATCTCCTGGTTCAGCC +
Preference number: 4 (lower is better)
Translates to: STDALSNSGSSLSMSRIRGMAFS*LSPGSA
Trigger: GGCTGAACCAGGAGATAGGCATGAGAAAGCCATCCC...CCTGATTCTAGACATAGACAGGGATGATCCACTGTTACTGAGGGCATCAGTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329153.10
ENST00000561370.5
CDS-3UTR GCA 90 bp CCAAGATATTATAAAACCAGAGCTGTTATGTCTGTCACCAGCCCTGCAGGAATTCCACGGTCAGGTAGATaGGGATGCACTCAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: PRYYKTRAVMSVTSPAGIPRSGR*GCTQEG
Trigger: CCCCTCCTGAGTGCATCCGCATCTACCTGACCGTGG...AATTCCTGCAGGGCTGGTGACAGACATAACAGCTCTGGTTTTATAATATCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR GCA 90 bp AGCACTGATGCCCTCAGTAACAGTGGATCATCCCTGTCTATGTCTAGAATCAGGATTGGACCTACCTCCTaGCCTTGCTTGCACATTGCG +
Preference number: 4 (lower is better)
Translates to: STDALSNSGSSLSMSRIRIGPTS*PCLHIA
Trigger: CGCAATGTGCAAGCAAGGGCAGGAGGTAGGTCCAAT...CCTGATTCTAGACATAGACAGGGATGATCCACTGTTACTGAGGGCATCAGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR GCA 90 bp ATATCTCTAAATCCAGAGGCACTAGTGGTGTTGGGGAATCGGGTAGGAGAAATACACCCAACTGAGGACTaGATGATGCTGGGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: ISLNPEALVVLGNRVGEIHPTED*MMLGLG
Trigger: CCCAAGCCCCAGCATCATGCAGTCCTCAGTTGGGTG...TATTTCTCCTACCCGATTCCCCAACACCACTAGTGCCTCTGGATTTAGAGATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561370.5
CDS-3UTR GCA 90 bp AGCACTGATGCCCTCAGTAACAGTGGATCATCCCTGTCTATGTCTAGAATCAGGTGCCTTGAGGACTGCTaGAAGGAAGAGAAGAGCACG +
Preference number: 4 (lower is better)
Translates to: STDALSNSGSSLSMSRIRCLEDC*KEEKST
Trigger: CGTGCTCTTCTCTTCCTTGCAGCAGTCCTCAAGGCA...CCTGATTCTAGACATAGACAGGGATGATCCACTGTTACTGAGGGCATCAGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561370.5
CDS-3UTR GCA 90 bp TGCACTCAGGAGGGGAGCATCCTTGCAATGTTGCCCATTTTGTGGTCAACATATAAGAGGAATCTGCCCTaGCTTGAGGACTGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: CTQEGSILAMLPILWSTYKRNLP*LEDCCK
Trigger: CTTGCAGCAGTCCTCAAGGCAGGGCAGATTCCTCTT...ATATGTTGACCACAAAATGGGCAACATTGCAAGGATGCTCCCCTCCTGAGTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561370.5
CDS-3UTR CCA 90 bp ATAAAACCAGAGCTGTTATGTCTGTCACCAGCCCTGCAGGAATTATTCAGGAACGCTCCCTTATCTTGCTaGCCTGTAGGCGGAACCGGA +
Preference number: 4 (lower is better)
Translates to: IKPELLCLSPALQELFRNAPLSC*PVGGTG
Trigger: TCCGGTTCCGCCTACAGGCCAGCAAGATAAGGGAGC...GTTCCTGAATAATTCCTGCAGGGCTGGTGACAGACATAACAGCTCTGGTTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CCA 90 bp AGCACTGATGCCCTCAGTAACAGTGGATCATCCCTGTCTATGTCTAGAATCAGGTTCCACGTCTTCACCTaGCTCCCCATTTTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: STDALSNSGSSLSMSRIRFHVFT*LPIFSR
Trigger: CCTGCTGAAAATGGGGAGCCAGGTGAAGACGTGGAA...CCTGATTCTAGACATAGACAGGGATGATCCACTGTTACTGAGGGCATCAGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CCA 90 bp ATATCTCTAAATCCAGAGGCACTAGTGGTGTTGGGGAATCGGGTAGGAGAAATAGGAGTACTTCTGAGGTaGGCGGCAGCTGGTCTGCTT +
Preference number: 4 (lower is better)
Translates to: ISLNPEALVVLGNRVGEIGVLLR*AAAGLL
Trigger: AAGCAGACCAGCTGCCGCCCACCTCAGAAGTACTCC...TATTTCTCCTACCCGATTCCCCAACACCACTAGTGCCTCTGGATTTAGAGATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CCA 90 bp AAGTTTGCCAGAAGTCTCAAGGAGCATATCCAGGCCCACATGCCTGAAATAGTCGGCCAGTTTCACTTCTaGGATCTGCATGGCGTTGGA +
Preference number: 4 (lower is better)
Translates to: KFARSLKEHIQAHMPEIVGQFHF*DLHGVG
Trigger: TCCAACGCCATGCAGATCCCAGAAGTGAAACTGGCC...GACTATTTCAGGCATGTGGGCCTGGATATGCTCCTTGAGACTTCTGGCAAACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CCA 90 bp AGCATCCTTGCAATGTTGCCCATTTTGTGGTCAACATATCTGCCAGGTGCCTCAGGCCAGTTTCACTTCTaGGATCTGCATGGCGTTGGA +
Preference number: 4 (lower is better)
Translates to: SILAMLPILWSTYLPGASGQFHF*DLHGVG
Trigger: TCCAACGCCATGCAGATCCCAGAAGTGAAACTGGCC...TGAGGCACCTGGCAGATATGTTGACCACAAAATGGGCAACATTGCAAGGATGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561370.5
CDS-3UTR CCA 90 bp AAGTTTGCCAGAAGTCTCAAGGAGCATATCCAGGCCCACATGCCTGAAATAGTCAGGGCAAAGCCAGAGTaGGATGGCTTTCTCATGCCT +
Preference number: 4 (lower is better)
Translates to: KFARSLKEHIQAHMPEIVRAKPE*DGFLMP
Trigger: AGGCATGAGAAAGCCATCCCACTCTGGCTTTGCCCT...GACTATTTCAGGCATGTGGGCCTGGATATGCTCCTTGAGACTTCTGGCAAACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CCA 90 bp AGCACTGATGCCCTCAGTAACAGTGGATCATCCCTGTCTATGTCTAGAATCAGGGGTGCAGCTCCTTCATaGCTTGTTCCCACTTGGAGA +
Preference number: 4 (lower is better)
Translates to: STDALSNSGSSLSMSRIRGAAPS*LVPTWR
Trigger: TCTCCAAGTGGGAACAAGCCATGAAGGAGCTGCACC...CCTGATTCTAGACATAGACAGGGATGATCCACTGTTACTGAGGGCATCAGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329153.10
ENST00000561370.5
CDS-3UTR CCA 90 bp TCAGGAACCTGTGGTACATGTGACTTGTTCGAGGTAGAAATGTCTCAGCTAGATGAAGATGCTGAGCCTTaGCAGGGGATGTGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: SGTCGTCDLFEVEMSQLDEDAEP*QGMCLQ
Trigger: CTGGAGGCACATCCCCTGCCAAGGCTCAGCATCTTC...ATCTAGCTGAGACATTTCTACCTCGAACAAGTCACATGTACCACAGGTTCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CCA 90 bp TCAGGAACCTGTGGTACATGTGACTTGTTCGAGGTAGAAATGTCTCAGCTAGATAGGGAGGGGTCAGATTaGACCTACCTCCTGCCCTTG +
Preference number: 4 (lower is better)
Translates to: SGTCGTCDLFEVEMSQLDREGSD*TYLLPL
Trigger: CAAGGGCAGGAGGTAGGTCCAATCTGACCCCTCCCT...ATCTAGCTGAGACATTTCTACCTCGAACAAGTCACATGTACCACAGGTTCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CCA 90 bp TCCTCATTCACAGCAATCCACACCAGAGCGTTCTCCTTGGAAGACAGCTGGGCACCCAGTGTTCTGCTCTaGTTAGCTCTTAAAGAGGAA +
Preference number: 4 (lower is better)
Translates to: SSFTAIHTRAFSLEDSWAPSVLL*LALKEE
Trigger: TTCCTCTTTAAGAGCTAACCAGAGCAGAACACTGGG...TGCCCAGCTGTCTTCCAAGGAGAACGCTCTGGTGTGGATTGCTGTGAATGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561370.5
3UTR CAA 72 bp TGTACCCTCACCCTCAAACTAATTCCCAGCAGAAGTTaGCCAGAAGTCTCAAGGAGCATATCCAGGCCCACA +
Preference number: 4 (lower is better)
Translates to: CTLTLKLIPSRS*PEVSRSISRPT
Trigger: TGTGGGCCTGGATATGCTCCTTGAGACTTCTGGCAAACTTCTGCTGGGAATTAGTTTGAGGGTGAGGGTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR TCA 90 bp TCAGGAACCTGTGGTACATGTGACTTGTTCGAGGTAGAAATGTCTCAGCTAGATTCTGGGAGACATATCTaGGAGCCGCATGCCCGATGT +
Preference number: 4 (lower is better)
Translates to: SGTCGTCDLFEVEMSQLDSGRHI*EPHARC
Trigger: ACATCGGGCATGCGGCTCTCAGATATGTCTCCCAGA...ATCTAGCTGAGACATTTCTACCTCGAACAAGTCACATGTACCACAGGTTCCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR TCA 90 bp AGCACTGATGCCCTCAGTAACAGTGGATCATCCCTGTCTATGTCTAGAATCAGGAGATCCACTTGGCCTTaGGGTTTCCGGATGACATCA +
Preference number: 4 (lower is better)
Translates to: STDALSNSGSSLSMSRIRRSTWP*GFRMTS
Trigger: TGATGTCATCCGGAAACCTCAAGGCCAAGTGGATCT...CCTGATTCTAGACATAGACAGGGATGATCCACTGTTACTGAGGGCATCAGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR TCA 90 bp TGTACCCTCACCCTCAAACTAATTCCCAGCAGAAGTTTGCCAGAAGTCTCAAGGCTCATAGTCCTCGTCTaGGTCACAGGATCGATCTAC +
Preference number: 4 (lower is better)
Translates to: CTLTLKLIPSRSLPEVSRLIVLV*VTGSIY
Trigger: GTAGATCGATCCTGTGACTCAGACGAGGACTATGAG...CCTTGAGACTTCTGGCAAACTTCTGCTGGGAATTAGTTTGAGGGTGAGGGTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR TCA 90 bp GGGTTAAAGGCTTGGTTTTGGGTGCTACTGCTAAATATACAGTTTTCAGCACTTCCGAGGGATCGTCCGTaGAGAGGGCAAAGCCAGAGT +
Preference number: 4 (lower is better)
Translates to: GLKAWFWVLLLNIQFSALPRDRP*RGQSQS
Trigger: ACTCTGGCTTTGCCCTCTTCACGGACGATCCCTCGG...AAGTGCTGAAAACTGTATATTTAGCAGTAGCACCCAAAACCAAGCCTTTAACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR TCA 90 bp AAACCAGAGCTGTTATGTCTGTCACCAGCCCTGCAGGAATTATTCAGGAACCTGAAACTAAAGGGTTCCTaGAGGGTTGGGGAGGAGAGA +
Preference number: 4 (lower is better)
Translates to: KPELLCLSPALQELFRNLKLKGS*RVGEER
Trigger: TCTCTCCTCCCCAACCCTTCAGGAACCCTTTAGTTT...CAGGTTCCTGAATAATTCCTGCAGGGCTGGTGACAGACATAACAGCTCTGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR GCA 90 bp CTTAGAGATACCCAAGATATTATAAAACCAGAGCTGTTATGTCTGTCACCAGCCGGCACCTGGGGAAGGTaGAAGCACAGCTGCCTTCAG +
Preference number: 4 (lower is better)
Translates to: LRDTQDIIKPELLCLSPAGTWGR*KHSCLQ
Trigger: CTGAAGGCAGCTGTGCTTGCACCTTCCCCAGGTGCC...GGCTGGTGACAGACATAACAGCTCTGGTTTTATAATATCTTGGGTATCTCTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR GCA 90 bp TCAGGAACCTGTGGTACATGTGACTTGTTCGAGGTAGAAATGTCTCAGCTAGATCCCTTGCTTGCACATTaGGTGGTACTGGGTTTGGCC +
Preference number: 4 (lower is better)
Translates to: SGTCGTCDLFEVEMSQLDPLLAH*VVLGLA
Trigger: GGCCAAACCCAGTACCACGCAATGTGCAAGCAAGGG...ATCTAGCTGAGACATTTCTACCTCGAACAAGTCACATGTACCACAGGTTCCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR GCA 90 bp ATAAAACCAGAGCTGTTATGTCTGTCACCAGCCCTGCAGGAATTATTCAGGAACCCTACCTCCTGCCCTTaGTTGCACATTGCGTGGTAC +
Preference number: 4 (lower is better)
Translates to: IKPELLCLSPALQELFRNPTSCP*LHIAWY
Trigger: GTACCACGCAATGTGCAAGCAAGGGCAGGAGGTAGG...GTTCCTGAATAATTCCTGCAGGGCTGGTGACAGACATAACAGCTCTGGTTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CCA 90 bp CTTCCAAAACACACAGTTACCTGGTTCACAGATAGCTGCTTTTTATTGACAAACGTCCGCTGGTCTTCCTaGACTCAGAGGAGGGGACCG +
Preference number: 4 (lower is better)
Translates to: LPKHTVTWFTDSCFLLTNVRWSS*TQRRGP
Trigger: CGGTCCCCTCCTCTGAGTCCAGGAAGACCAGCGGAC...GTTTGTCAATAAAAAGCAGCTATCTGTGAACCAGGTAACTGTGTGTTTTGGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CCA 90 bp TCAGGAACCTGTGGTACATGTGACTTGTTCGAGGTAGAAATGTCTCAGCTAGATACCTTCAGCAGGCTCTaGAGTACTCGGATCCACTCC +
Preference number: 4 (lower is better)
Translates to: SGTCGTCDLFEVEMSQLDTFSRL*STRIHS
Trigger: GGAGTGGATCCGAGTACTCCAGAGCCTGCTGAAGGT...ATCTAGCTGAGACATTTCTACCTCGAACAAGTCACATGTACCACAGGTTCCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CCA 90 bp CCAAGATATTATAAAACCAGAGCTGTTATGTCTGTCACCAGCCCTGCAGGAATTCTGAAGGGCAAGGAGTaGTGGAAGGGGTTACGCAGC +
Preference number: 4 (lower is better)
Translates to: PRYYKTRAVMSVTSPAGILKGKE*WKGLRS
Trigger: GCTGCGTAACCCCTTCCACCACTCCTTGCCCTTCAG...AATTCCTGCAGGGCTGGTGACAGACATAACAGCTCTGGTTTTATAATATCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CCA 90 bp TTGGGAGCAGCCATCCGGAAGATCAACTTCTCAATGTGGCTTTTTCCAGAGCTCAAAGCCAGAGTGGGATaGCTTTCTCATGCCTATCTC +
Preference number: 4 (lower is better)
Translates to: LGAAIRKINFSMWLFPELKARVG*LSHAYL
Trigger: GAGATAGGCATGAGAAAGCCATCCCACTCTGGCTTT...GAGCTCTGGAAAAAGCCACATTGAGAAGTTGATCTTCCGGATGGCTGCTCCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561370.5
CDS-3UTR CCA 90 bp TCTGGGATAGATCTAATCACAAGCATGAAGTCATCCCTGCAGCCACCAAACGTTAGGGCAAAGCCAGAGTaGGATGGCTTTCTCATGCCT +
Preference number: 4 (lower is better)
Translates to: SGIDLITSMKSSLQPPNVRAKPE*DGFLMP
Trigger: AGGCATGAGAAAGCCATCCCACTCTGGCTTTGCCCT...AACGTTTGGTGGCTGCAGGGATGACTTCATGCTTGTGATTAGATCTATCCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561370.5
CDS-3UTR CCA 90 bp AGCAACGTTGGCCCCTTGGTAGCACAGGAAACAGAAGAAAAGAACTGTCGTCCATGGCTTGTTCCCACTTaGAGATGGCATCACAGATCT +
Preference number: 4 (lower is better)
Translates to: SNVGPLVAQETEEKNCRPWLVPT*RWHHRS
Trigger: AGATCTGTGATGCCATCTCCAAGTGGGAACAAGCCA...TGGACGACAGTTCTTTTCTTCTGTTTCCTGTGCTACCAAGGGGCCAACGTTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561370.5
CDS-3UTR CCA 90 bp GAGCTCTTGTCTGGGATAGATCTAATCACAAGCATGAAGTCATCCCTGCAGCCATATTCACAGCAACGTTaGCCCCTTGGTAGCACAGGA +
Preference number: 4 (lower is better)
Translates to: ELLSGIDLITSMKSSLQPYSQQR*PLGSTG
Trigger: TCCTGTGCTACCAAGGGGCCAACGTTGCTGTGAATA...TGGCTGCAGGGATGACTTCATGCTTGTGATTAGATCTATCCCAGACAAGAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561057.1
ENST00000561370.5
CDS-3UTR CCA 90 bp AGCATCCTTGCAATGTTGCCCATTTTGTGGTCAACATATCTGCCAGGTGCCTCATATTCACAGCAACGTTaGCCCCTTGGTAGCACAGGA +
Preference number: 4 (lower is better)
Translates to: SILAMLPILWSTYLPGASYSQQR*PLGSTG
Trigger: TCCTGTGCTACCAAGGGGCCAACGTTGCTGTGAATA...TGAGGCACCTGGCAGATATGTTGACCACAAAATGGGCAACATTGCAAGGATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561370.5
CDS-3UTR CCA 90 bp ACCTGTGGTACATGTGACTTGTTCGAGGTAGAAATGTCTCAGCTAGATCCCCAAGCGTGGTACTGGGTTTaGCCTAAAGTCCAGTGTGAG +
Preference number: 4 (lower is better)
Translates to: TCGTCDLFEVEMSQLDPQAWYWV*PKVQCE
Trigger: CTCACACTGGACTTTAGGCCAAACCCAGTACCACGC...TTGGGGATCTAGCTGAGACATTTCTACCTCGAACAAGTCACATGTACCACAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CCA 90 bp AGCACTGATGCCCTCAGTAACAGTGGATCATCCCTGTCTATGTCTAGAATCAGGCACATTGCGTGGTACTaGGTTTGGCCTAAAGTCCAG +
Preference number: 4 (lower is better)
Translates to: STDALSNSGSSLSMSRIRHIAWY*VWPKVQ
Trigger: CTGGACTTTAGGCCAAACCCAGTACCACGCAATGTG...CCTGATTCTAGACATAGACAGGGATGATCCACTGTTACTGAGGGCATCAGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR TCA 90 bp AGCACTGATGCCCTCAGTAACAGTGGATCATCCCTGTCTATGTCTAGAATCAGGCGTGAAGGAGCTATCTaGATAGCTTCTAGCGCATCT +
Preference number: 4 (lower is better)
Translates to: STDALSNSGSSLSMSRIRREGAI*IASSAS
Trigger: AGATGCGCTAGAAGCTATTCAGATAGCTCCTTCACG...CCTGATTCTAGACATAGACAGGGATGATCCACTGTTACTGAGGGCATCAGTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR TCA 90 bp CTTAGAGATACCCAAGATATTATAAAACCAGAGCTGTTATGTCTGTCACCAGCCCTGGATTCCCGGCTCTaGAGGGACAGAATCCTGCTC +
Preference number: 4 (lower is better)
Translates to: LRDTQDIIKPELLCLSPALDSRL*RDRILL
Trigger: GAGCAGGATTCTGTCCCTTCAGAGCCGGGAATCCAG...GGCTGGTGACAGACATAACAGCTCTGGTTTTATAATATCTTGGGTATCTCTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR TCA 90 bp TCAGGAACCTGTGGTACATGTGACTTGTTCGAGGTAGAAATGTCTCAGCTAGATCTTGAGGTTTCCGGATaGCATCACTCGGGGACTTGT +
Preference number: 4 (lower is better)
Translates to: SGTCGTCDLFEVEMSQLDLEVSG*HHSGTC
Trigger: ACAAGTCCCCGAGTGATGTCATCCGGAAACCTCAAG...ATCTAGCTGAGACATTTCTACCTCGAACAAGTCACATGTACCACAGGTTCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR TCA 90 bp CTTAGAGATACCCAAGATATTATAAAACCAGAGCTGTTATGTCTGTCACCAGCCGCTGCCAGCACTGCATaGGGGAGTACTTCTGAGGTG +
Preference number: 4 (lower is better)
Translates to: LRDTQDIIKPELLCLSPAAASTA*GSTSEV
Trigger: CACCTCAGAAGTACTCCCTCATGCAGTGCTGGCAGC...GGCTGGTGACAGACATAACAGCTCTGGTTTTATAATATCTTGGGTATCTCTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR TCA 90 bp GTATCATACCCTAGGATATATATCTCTAAATCCAGAGGCACTAGTGGTGTTGGGACCCTGTGGACTGGGTaGCATAGTGACACTGTGTCC +
Preference number: 4 (lower is better)
Translates to: VSYPRIYISKSRGTSGVGTLWTG*HSDTVS
Trigger: GGACACAGTGTCACTATGTCACCCAGTCCACAGGGT...CCCAACACCACTAGTGCCTCTGGATTTAGAGATATATATCCTAGGGTATGATAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR GCA 90 bp TGTACCCTCACCCTCAAACTAATTCCCAGCAGAAGTTTGCCAGAAGTCTCAAGGCTCCACCTTGAGTTCTaGCATGATGGAATCGACTTC +
Preference number: 4 (lower is better)
Translates to: CTLTLKLIPSRSLPEVSRLHLEF*HDGIDF
Trigger: GAAGTCGATTCCATCATGGCAGAACTCAAGGTGGAG...CCTTGAGACTTCTGGCAAACTTCTGCTGGGAATTAGTTTGAGGGTGAGGGTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR GCA 90 bp GGGTTAAAGGCTTGGTTTTGGGTGCTACTGCTAAATATACAGTTTTCAGCACTTGCAGCTCCCTTATCTTaGTGGCCTGTAGGCGGAACC +
Preference number: 4 (lower is better)
Translates to: GLKAWFWVLLLNIQFSALAAPLS*WPVGGT
Trigger: GGTTCCGCCTACAGGCCAGCAAGATAAGGGAGCTGC...AAGTGCTGAAAACTGTATATTTAGCAGTAGCACCCAAAACCAAGCCTTTAACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR GCA 90 bp CTTCCAAAACACACAGTTACCTGGTTCACAGATAGCTGCTTTTTATTGACAAACGCGTTCTCTGCTCTCTaGTCTGCCTCCAGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: LPKHTVTWFTDSCFLLTNAFSAL*SASSSL
Trigger: GAGGCTGCTGGAGGCAGAGCAGAGAGCAGAGAACGC...GTTTGTCAATAAAAAGCAGCTATCTGTGAACCAGGTAACTGTGTGTTTTGGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR GCA 90 bp GTTAATAAACAGATCTTCCAAAACACACAGTTACCTGGTTCACAGATAGCTGCTAGGTGCAAGCACAGCTaGCTTCAGACCCTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: VNKQIFQNTQLPGSQIAARCKHS*LQTLGL
Trigger: CAGGCCCAGGGTCTGAAGGCAGCTGTGCTTGCACCT...AGCAGCTATCTGTGAACCAGGTAACTGTGTGTTTTGGAAGATCTGTTTATTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR GCA 90 bp GTGGTGTTGGGGAATCGGGTAGGAGAAATATTCACAGCAACGTTGGCCCCTTGGGATGAAGGTAGCTTCTaGAATCTGGGAGAAAATATC +
Preference number: 4 (lower is better)
Translates to: VVLGNRVGEIFTATLAPWDEGSF*NLGENI
Trigger: GATATTTTCTCCCAGATTGCAGAAGCTACCTTCATC...CCAAGGGGCCAACGTTGCTGTGAATATTTCTCCTACCCGATTCCCCAACACCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000561370.5
CDS-3UTR CCA 90 bp TATGTCTGTCACCAGCCCTGCAGGAATTATTCAGGAACCTGTGGTACATGTGACGCTTTCAGCAATTCTTaGTATTTCCGGTGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: YVCHQPCRNYSGTCGTCDAFSNS*YFRCRL
Trigger: GAGCCTGCACCGGAAATACCAAGAATTGCTGAAAGC...GTCACATGTACCACAGGTTCCTGAATAATTCCTGCAGGGCTGGTGACAGACATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CCA 90 bp ATCAGAAGGTCTGAATTGAGGGGGATTATGGTATTATCAGTAAGGCAAAAGATGTGCCTTTTGGCCAACTaGATGCTGTCCCGCGGGGTG +
Preference number: 4 (lower is better)
Translates to: IRRSELRGIMVLSVRQKMCLLAN*MLSRGV
Trigger: CACCCCGCGGGACAGCATCCAGTTGGCCAAAAGGCA...CATCTTTTGCCTTACTGATAATACCATAATCCCCCTCAATTCAGACCTTCTGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CCA 90 bp CCCTGTCTATGTCTAGAATCAGGTAGCATCTGGAGTCATTATTCTTATGAAAAAGCCGCATGCCCGATGTaGCCACAGCATAGATCCGGC +
Preference number: 4 (lower is better)
Translates to: PCLCLESGSIWSHYSYEKAACPM*PQHRSG
Trigger: GCCGGATCTATGCTGTGGCCACATCGGGCATGCGGC...TTTTTCATAAGAATAATGACTCCAGATGCTACCTGATTCTAGACATAGACAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CCA 90 bp TATATATCTCTAAATCCAGAGGCACTAGTGGTGTTGGGGAATCGGGTAGGAGAATCCCCTCGAACAATTTaGCAGCGGGAGTTCAGATCC +
Preference number: 4 (lower is better)
Translates to: YISLNPEALVVLGNRVGESPRTI*QREFRS
Trigger: GGATCTGAACTCCCGCTGCCAAATTGTTCGAGGGGA...TTCTCCTACCCGATTCCCCAACACCACTAGTGCCTCTGGATTTAGAGATATATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CCA 90 bp TATATATCTCTAAATCCAGAGGCACTAGTGGTGTTGGGGAATCGGGTAGGAGAAGGATCTGCATGGCGTTaGAGCTGCTGCTTGACATAC +
Preference number: 4 (lower is better)
Translates to: YISLNPEALVVLGNRVGEGSAWR*SCCLTY
Trigger: GTATGTCAAGCAGCAGCTCCAACGCCATGCAGATCC...TTCTCCTACCCGATTCCCCAACACCACTAGTGCCTCTGGATTTAGAGATATATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329153.10
ENST00000561370.5
CDS-3UTR CCA 90 bp AAGTTTGCCAGAAGTCTCAAGGAGCATATCCAGGCCCACATGCCTGAAATAGTCTGGCTTGTTCCCACTTaGAGATGGCATCACAGATCT +
Preference number: 4 (lower is better)
Translates to: KFARSLKEHIQAHMPEIVWLVPT*RWHHRS
Trigger: AGATCTGTGATGCCATCTCCAAGTGGGAACAAGCCA...GACTATTTCAGGCATGTGGGCCTGGATATGCTCCTTGAGACTTCTGGCAAACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CCA 90 bp AGCACTGATGCCCTCAGTAACAGTGGATCATCCCTGTCTATGTCTAGAATCAGGCCACTATCTCTCTACTaGTTTGAGAGGCAAGGAGCA +
Preference number: 4 (lower is better)
Translates to: STDALSNSGSSLSMSRIRPLSLY*FERQGA
Trigger: TGCTCCTTGCCTCTCAAACCAGTAGAGAGATAGTGG...CCTGATTCTAGACATAGACAGGGATGATCCACTGTTACTGAGGGCATCAGTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329153.10
ENST00000561370.5
CDS-3UTR CCA 90 bp GTATCATACCCTAGGATATATATCTCTAAATCCAGAGGCACTAGTGGTGTTGGGTCCCCATATTCTACCTaGGCCATCAGGGCAGCCATC +
Preference number: 4 (lower is better)
Translates to: VSYPRIYISKSRGTSGVGSPYST*AIRAAI
Trigger: GATGGCTGCCCTGATGGCCCAGGTAGAATATGGGGA...CCCAACACCACTAGTGCCTCTGGATTTAGAGATATATATCCTAGGGTATGATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329153.10
ENST00000561370.5
CDS-3UTR CCA 90 bp ACCTGTGGTACATGTGACTTGTTCGAGGTAGAAATGTCTCAGCTAGATCCCCAATATTCACAGCAACGTTaGCCCCTTGGTAGCACAGGA +
Preference number: 4 (lower is better)
Translates to: TCGTCDLFEVEMSQLDPQYSQQR*PLGSTG
Trigger: TCCTGTGCTACCAAGGGGCCAACGTTGCTGTGAATA...TTGGGGATCTAGCTGAGACATTTCTACCTCGAACAAGTCACATGTACCACAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329153.10
ENST00000559168.1
CDS-3UTR TCA 90 bp GTTAATAAACAGATCTTCCAAAACACACAGTTACCTGGTTCACAGATAGCTGCTCGGAACCGGAAAAGCTaGGTTTCCAGGGTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: VNKQIFQNTQLPGSQIAARNRKS*VSRVRQ
Trigger: CTGCCTGACCCTGGAAACTCAGCTTTTCCGGTTCCG...AGCAGCTATCTGTGAACCAGGTAACTGTGTGTTTTGGAAGATCTGTTTATTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR TCA 90 bp GATATTATAAAACCAGAGCTGTTATGTCTGTCACCAGCCCTGCAGGAATTATTCTTCTGCTTCTCCAGCTaGGCCTCTAGCTGGCTGATG +
Preference number: 4 (lower is better)
Translates to: DIIKPELLCLSPALQELFFCFSS*ASSWLM
Trigger: CATCAGCCAGCTAGAGGCTCAGCTGGAGAAGCAGAA...GAATAATTCCTGCAGGGCTGGTGACAGACATAACAGCTCTGGTTTTATAATATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR TCA 90 bp CCAAGATATTATAAAACCAGAGCTGTTATGTCTGTCACCAGCCCTGCAGGAATTGACAGCTGGGCAGGCTaGGCAGCAAAAAGTTTAGCA +
Preference number: 4 (lower is better)
Translates to: PRYYKTRAVMSVTSPAGIDSWAG*AAKSLA
Trigger: TGCTAAACTTTTTGCTGCTCAGCCTGCCCAGCTGTC...AATTCCTGCAGGGCTGGTGACAGACATAACAGCTCTGGTTTTATAATATCTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR TCA 90 bp AAGTTTGCCAGAAGTCTCAAGGAGCATATCCAGGCCCACATGCCTGAAATAGTCACCAAACGTTGTCACTaGAGAGTAGGGGTAAGTGAT +
Preference number: 4 (lower is better)
Translates to: KFARSLKEHIQAHMPEIVTKRCH*RVGVSD
Trigger: ATCACTTACCCCTACTCTTCAGTGACAACGTTTGGT...GACTATTTCAGGCATGTGGGCCTGGATATGCTCCTTGAGACTTCTGGCAAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR TCA 90 bp AAACCAGAGCTGTTATGTCTGTCACCAGCCCTGCAGGAATTATTCAGGAACCTGACCCCAAATTCAGTGTaGACACAGCTCCATTCTTGT +
Preference number: 4 (lower is better)
Translates to: KPELLCLSPALQELFRNLTPNSV*TQLHSC
Trigger: ACAAGAATGGAGCTGTGTTCACACTGAATTTGGGGT...CAGGTTCCTGAATAATTCCTGCAGGGCTGGTGACAGACATAACAGCTCTGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329153.10
ENST00000559168.1
CDS-3UTR GCA 90 bp GGGTTAAAGGCTTGGTTTTGGGTGCTACTGCTAAATATACAGTTTTCAGCACTTTCTTGGTATTTCCGGTaGAGGCTCCCCTCAGAGTCC +
Preference number: 4 (lower is better)
Translates to: GLKAWFWVLLLNIQFSALSWYFR*RLPSES
Trigger: GGACTCTGAGGGGAGCCTGCACCGGAAATACCAAGA...AAGTGCTGAAAACTGTATATTTAGCAGTAGCACCCAAAACCAAGCCTTTAACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR GCA 90 bp CCCTGTCTATGTCTAGAATCAGGTAGCATCTGGAGTCATTATTCTTATGAAAAAGTAGGGTCAGACTGCTaGCAGGACCACCTTCCCTGG +
Preference number: 4 (lower is better)
Translates to: PCLCLESGSIWSHYSYEKVGSDC*QDHLPW
Trigger: CCAGGGAAGGTGGTCCTGGCAGCAGTCTGACCCTAC...TTTTTCATAAGAATAATGACTCCAGATGCTACCTGATTCTAGACATAGACAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR GCA 90 bp CTTATTGGCCTTAGAGATACCCAAGATATTATAAAACCAGAGCTGTTATGTCTGTTTTGGCCAACTGGATaGTGTCCCGCGGGGTGCCAG +
Preference number: 4 (lower is better)
Translates to: LIGLRDTQDIIKPELLCLFWPTG*CPAGCQ
Trigger: CTGGCACCCCGCGGGACAGCATCCAGTTGGCCAAAA...CAGACATAACAGCTCTGGTTTTATAATATCTTGGGTATCTCTAAGGCCAATAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR GCA 90 bp CTTCCAAAACACACAGTTACCTGGTTCACAGATAGCTGCTTTTTATTGACAAACTGGGGCTGGCTGTGGTaGCTTTTGGCCAACTGGATG +
Preference number: 4 (lower is better)
Translates to: LPKHTVTWFTDSCFLLTNWGWLW*LLANWM
Trigger: CATCCAGTTGGCCAAAAGGCACCACAGCCAGCCCCA...GTTTGTCAATAAAAAGCAGCTATCTGTGAACCAGGTAACTGTGTGTTTTGGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR GCA 90 bp CCCTGTCTATGTCTAGAATCAGGTAGCATCTGGAGTCATTATTCTTATGAAAAAGGCACTGCTGCCACCTaGAGCCACTGTGAGGTGGTA +
Preference number: 4 (lower is better)
Translates to: PCLCLESGSIWSHYSYEKGTAAT*SHCEVV
Trigger: TACCACCTCACAGTGGCTGCAGGTGGCAGCAGTGCC...TTTTTCATAAGAATAATGACTCCAGATGCTACCTGATTCTAGACATAGACAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR GCA 90 bp CCCTGTCTATGTCTAGAATCAGGTAGCATCTGGAGTCATTATTCTTATGAAAAACACAGAGCGAGGAGCTaGCAGCACTGCATGAGGGAG +
Preference number: 4 (lower is better)
Translates to: PCLCLESGSIWSHYSYEKHRARS*QHCMRE
Trigger: CTCCCTCATGCAGTGCTGGCAGCTCCTCGCTCTGTG...TTTTTCATAAGAATAATGACTCCAGATGCTACCTGATTCTAGACATAGACAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR GCA 90 bp TATTATAAAACCAGAGCTGTTATGTCTGTCACCAGCCCTGCAGGAATTATTCAGGCATGGCGTTGGAGCTaGTGCTTGACATACCAGAGG +
Preference number: 4 (lower is better)
Translates to: YYKTRAVMSVTSPAGIIQAWRWS*CLTYQR
Trigger: CCTCTGGTATGTCAAGCAGCAGCTCCAACGCCATGC...CTGAATAATTCCTGCAGGGCTGGTGACAGACATAACAGCTCTGGTTTTATAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR GCA 90 bp ATAAAACCAGAGCTGTTATGTCTGTCACCAGCCCTGCAGGAATTATTCAGGAACTGTGGTCAACATATCTaGCAGGTGCCTCAGCTGTTC +
Preference number: 4 (lower is better)
Translates to: IKPELLCLSPALQELFRNCGQHI*QVPQLF
Trigger: GAACAGCTGAGGCACCTGGCAGATATGTTGACCACA...GTTCCTGAATAATTCCTGCAGGGCTGGTGACAGACATAACAGCTCTGGTTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR GCA 90 bp GGGTTAAAGGCTTGGTTTTGGGTGCTACTGCTAAATATACAGTTTTCAGCACTTTCAGGTAGATGCGGATaGACTCAGGAGGGGAGCATC +
Preference number: 4 (lower is better)
Translates to: GLKAWFWVLLLNIQFSALSGRCG*TQEGSI
Trigger: GATGCTCCCCTCCTGAGTGCATCCGCATCTACCTGA...AAGTGCTGAAAACTGTATATTTAGCAGTAGCACCCAAAACCAAGCCTTTAACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR GCA 90 bp CTAAATCCAGAGGCACTAGTGGTGTTGGGGAATCGGGTAGGAGAAATATTCACAGATGAAGGTAGCTTCTaGAATCTTGGGAGCAGCCAT +
Preference number: 4 (lower is better)
Translates to: LNPEALVVLGNRVGEIFTDEGSF*NLGSSH
Trigger: ATGGCTGCTCCCAAGATTGCAGAAGCTACCTTCATC...TGTGAATATTTCTCCTACCCGATTCCCCAACACCACTAGTGCCTCTGGATTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561057.1
CDS-3UTR GCA 90 bp AAGTTTGCCAGAAGTCTCAAGGAGCATATCCAGGCCCACATGCCTGAAATAGTCAAGGGGCTGTACCAATaGCTACATACCAATAATGGG +
Preference number: 4 (lower is better)
Translates to: KFARSLKEHIQAHMPEIVKGLYQ*LHTNNG
Trigger: CCCATTATTGGTATGTAGGCATTGGTACAGCCCCTT...GACTATTTCAGGCATGTGGGCCTGGATATGCTCCTTGAGACTTCTGGCAAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR GCA 90 bp CATGTTATCCTGCAAAGACTGCCCCAGAAGGGGCTGTACCAATGCCTACATACCCAGCAAAAAGCAGAGTaGATTTGCTTGGTCTTTTAC +
Preference number: 4 (lower is better)
Translates to: HVILQRLPQKGLYQCLHTQQKAE*ICLVFY
Trigger: GTAAAAGACCAAGCAAATGCACTCTGCTTTTTGCTG...GGTATGTAGGCATTGGTACAGCCCCTTCTGGGGCAGTCTTTGCAGGATAACATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR GCA 90 bp TATATATCTCTAAATCCAGAGGCACTAGTGGTGTTGGGGAATCGGGTAGGAGAAGTCTGTCACCAGCCCTaGAGGAATTATTCAGGAACC +
Preference number: 4 (lower is better)
Translates to: YISLNPEALVVLGNRVGEVCHQP*RNYSGT
Trigger: GGTTCCTGAATAATTCCTGCAGGGCTGGTGACAGAC...TTCTCCTACCCGATTCCCCAACACCACTAGTGCCTCTGGATTTAGAGATATATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329153.10
ENST00000559168.1
CDS-3UTR CCA 90 bp CCAAGATATTATAAAACCAGAGCTGTTATGTCTGTCACCAGCCCTGCAGGAATTACTTCTGGATTATTCTaGGGAGCCCTCCAGCGAGCT +
Preference number: 4 (lower is better)
Translates to: PRYYKTRAVMSVTSPAGITSGLF*GALQRA
Trigger: AGCTCGCTGGAGGGCTCCCCAGAATAATCCAGAAGT...AATTCCTGCAGGGCTGGTGACAGACATAACAGCTCTGGTTTTATAATATCTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CCA 90 bp CATGTTATCCTGCAAAGACTGCCCCAGAAGGGGCTGTACCAATGCCTACATACCCATCTTTGCCCTTTATaGCTTTCAGCAATTCTTGGT +
Preference number: 4 (lower is better)
Translates to: HVILQRLPQKGLYQCLHTHLCPL*LSAILG
Trigger: ACCAAGAATTGCTGAAAGCCATAAAGGGCAAAGATG...GGTATGTAGGCATTGGTACAGCCCCTTCTGGGGCAGTCTTTGCAGGATAACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CCA 90 bp CTTAGAGATACCCAAGATATTATAAAACCAGAGCTGTTATGTCTGTCACCAGCCAAGAAGCTTCATGCATaGCTGGTGGGGAGGGCTCTC +
Preference number: 4 (lower is better)
Translates to: LRDTQDIIKPELLCLSPAKKLHA*LVGRAL
Trigger: GAGAGCCCTCCCCACCAGCCATGCATGAAGCTTCTT...GGCTGGTGACAGACATAACAGCTCTGGTTTTATAATATCTTGGGTATCTCTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CCA 90 bp CTTCCAAAACACACAGTTACCTGGTTCACAGATAGCTGCTTTTTATTGACAAACCAGGACCACCTTCCCTaGCAGAGGTCTTTGTCCCAG +
Preference number: 4 (lower is better)
Translates to: LPKHTVTWFTDSCFLLTNQDHLP*QRSLSQ
Trigger: CTGGGACAAAGACCTCTGCCAGGGAAGGTGGTCCTG...GTTTGTCAATAAAAAGCAGCTATCTGTGAACCAGGTAACTGTGTGTTTTGGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CCA 90 bp CTTATTGGCCTTAGAGATACCCAAGATATTATAAAACCAGAGCTGTTATGTCTGACCTGGGGCTGGCTGTaGTGCCTTTTGGCCAACTGG +
Preference number: 4 (lower is better)
Translates to: LIGLRDTQDIIKPELLCLTWGWL*CLLANW
Trigger: CCAGTTGGCCAAAAGGCACCACAGCCAGCCCCAGGT...CAGACATAACAGCTCTGGTTTTATAATATCTTGGGTATCTCTAAGGCCAATAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CCA 90 bp TATTATAAAACCAGAGCTGTTATGTCTGTCACCAGCCCTGCAGGAATTATTCAGCGCACCAGACCACCTTaGAGTGGCCATGCTTTACCT +
Preference number: 4 (lower is better)
Translates to: YYKTRAVMSVTSPAGIIQRTRPP*SGHALP
Trigger: AGGTAAAGCATGGCCACTCCAAGGTGGTCTGGTGCG...CTGAATAATTCCTGCAGGGCTGGTGACAGACATAACAGCTCTGGTTTTATAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CCA 90 bp GATATTATAAAACCAGAGCTGTTATGTCTGTCACCAGCCCTGCAGGAATTATTCCTTCTGGGATCTGCATaGCGTTGGAGCTGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: DIIKPELLCLSPALQELFLLGSA*RWSCCL
Trigger: CAAGCAGCAGCTCCAACGCCATGCAGATCCCAGAAG...GAATAATTCCTGCAGGGCTGGTGACAGACATAACAGCTCTGGTTTTATAATATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CCA 90 bp CTTAGAGATACCCAAGATATTATAAAACCAGAGCTGTTATGTCTGTCACCAGCCCTCATGCCTATCTCCTaGTTCAGCCGCTGGAGGAAC +
Preference number: 4 (lower is better)
Translates to: LRDTQDIIKPELLCLSPALMPIS*FSRWRN
Trigger: GTTCCTCCAGCGGCTGAACCAGGAGATAGGCATGAG...GGCTGGTGACAGACATAACAGCTCTGGTTTTATAATATCTTGGGTATCTCTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CCA 90 bp GTATCATACCCTAGGATATATATCTCTAAATCCAGAGGCACTAGTGGTGTTGGGGGTGCAGCTCCTTCATaGCTTGTTCCCACTTGGAGA +
Preference number: 4 (lower is better)
Translates to: VSYPRIYISKSRGTSGVGGAAPS*LVPTWR
Trigger: TCTCCAAGTGGGAACAAGCCATGAAGGAGCTGCACC...CCCAACACCACTAGTGCCTCTGGATTTAGAGATATATATCCTAGGGTATGATAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329153.10
ENST00000561370.5
CDS-3UTR CCA 90 bp GTTATCCTTATTGGCCTTAGAGATACCCAAGATATTATAAAACCAGAGCTGTTATCCAGTTCCCACAGCTaGCAGGCTCCGGGTGGGTTG +
Preference number: 4 (lower is better)
Translates to: VILIGLRDTQDIIKPELLSSSHS*QAPGGL
Trigger: CAACCCACCCGGAGCCTGCCAGCTGTGGGAACTGGA...TAACAGCTCTGGTTTTATAATATCTTGGGTATCTCTAAGGCCAATAAGGATAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329153.10
ENST00000559168.1
CDS-3UTR CCA 90 bp ATATCTCTAAATCCAGAGGCACTAGTGGTGTTGGGGAATCGGGTAGGAGAAATATATTCACAGCAACGTTaGCCCCTTGGTAGCACAGGA +
Preference number: 4 (lower is better)
Translates to: ISLNPEALVVLGNRVGEIYSQQR*PLGSTG
Trigger: TCCTGTGCTACCAAGGGGCCAACGTTGCTGTGAATA...TATTTCTCCTACCCGATTCCCCAACACCACTAGTGCCTCTGGATTTAGAGATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329153.10
ENST00000559168.1
ENST00000561057.1
ENST00000561370.5
3UTR CAA 72 bp TCGGGTAGGAGAAATATTCACAGCAACGTTGGCCCCTaGGTAGCACAGGAAACAGAAGAAAAGAACTGTCGT +
Preference number: 4 (lower is better)
Translates to: SGRRNIHSNVGP*VAQETEEKNCR
Trigger: ACGACAGTTCTTTTCTTCTGTTTCCTGTGCTACCAAGGGGCCAACGTTGCTGTGAATATTTCTCCTACCCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561057.1
ENST00000561370.5
CDS-3UTR TCA 90 bp GATATTATAAAACCAGAGCTGTTATGTCTGTCACCAGCCCTGCAGGAATTATTCTTACCTTCTCTTCCATaGCACCCACCTGGGTCTCAG +
Preference number: 4 (lower is better)
Translates to: DIIKPELLCLSPALQELFLPSLP*HPPGSQ
Trigger: CTGAGACCCAGGTGGGTGTCATGGAAGAGAAGGTAA...GAATAATTCCTGCAGGGCTGGTGACAGACATAACAGCTCTGGTTTTATAATATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR TCA 90 bp CTTATTGGCCTTAGAGATACCCAAGATATTATAAAACCAGAGCTGTTATGTCTGAGAGGGGTGGAGGGCTaGGAAGGCCTCAGTCTCAAT +
Preference number: 4 (lower is better)
Translates to: LIGLRDTQDIIKPELLCLRGVEG*EGLSLN
Trigger: ATTGAGACTGAGGCCTTCTCAGCCCTCCACCCCTCT...CAGACATAACAGCTCTGGTTTTATAATATCTTGGGTATCTCTAAGGCCAATAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR TCA 90 bp TATTATAAAACCAGAGCTGTTATGTCTGTCACCAGCCCTGCAGGAATTATTCAGATTCGGAAACTCGCCTaGGAGCTGCAGTCATCGTCA +
Preference number: 4 (lower is better)
Translates to: YYKTRAVMSVTSPAGIIQIRKLA*ELQSSS
Trigger: TGACGATGACTGCAGCTCTCAGGCGAGTTTCCGAAT...CTGAATAATTCCTGCAGGGCTGGTGACAGACATAACAGCTCTGGTTTTATAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR TCA 90 bp CTTATTGGCCTTAGAGATACCCAAGATATTATAAAACCAGAGCTGTTATGTCTGGTCGGTGGAGTAGGATaGGGTGCGCTGCAGTTTGTG +
Preference number: 4 (lower is better)
Translates to: LIGLRDTQDIIKPELLCLVGGVG*GALQFV
Trigger: CACAAACTGCAGCGCACCTCATCCTACTCCACCGAC...CAGACATAACAGCTCTGGTTTTATAATATCTTGGGTATCTCTAAGGCCAATAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR TCA 90 bp GTATCATACCCTAGGATATATATCTCTAAATCCAGAGGCACTAGTGGTGTTGGGCCATCAGTTTTCCAATaGGCTGCTCATAGGCAGTGC +
Preference number: 4 (lower is better)
Translates to: VSYPRIYISKSRGTSGVGPSVFQ*AAHRQC
Trigger: GCACTGCCTATGAGCAGCTCATTGGAAAACTGATGG...CCCAACACCACTAGTGCCTCTGGATTTAGAGATATATATCCTAGGGTATGATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR GCA 90 bp ATATCTCTAAATCCAGAGGCACTAGTGGTGTTGGGGAATCGGGTAGGAGAAATACTCCATCTCAAGCTTTaGCAACTTGAGTGTCACCCA +
Preference number: 4 (lower is better)
Translates to: ISLNPEALVVLGNRVGEILHLKL*QLECHP
Trigger: TGGGTGACACTCAAGTTGGCAAAGCTTGAGATGGAG...TATTTCTCCTACCCGATTCCCCAACACCACTAGTGCCTCTGGATTTAGAGATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR GCA 90 bp CCAAGATATTATAAAACCAGAGCTGTTATGTCTGTCACCAGCCCTGCAGGAATTATCCTCCAAGGGGCTTaGTGCTTCAGAAACAGAGTC +
Preference number: 4 (lower is better)
Translates to: PRYYKTRAVMSVTSPAGIILQGA*CFRNRV
Trigger: GACTCTGTTTCTGAAGCAGCAAGCCCCTTGGAGGAT...AATTCCTGCAGGGCTGGTGACAGACATAACAGCTCTGGTTTTATAATATCTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR GCA 90 bp ATCAGAAGGTCTGAATTGAGGGGGATTATGGTATTATCAGTAAGGCAAAAGATGAACTCGCCTGAGAGCTaGAGTCATCGTCAGACCCAG +
Preference number: 4 (lower is better)
Translates to: IRRSELRGIMVLSVRQKMNSPES*SHRQTQ
Trigger: CTGGGTCTGACGATGACTGCAGCTCTCAGGCGAGTT...CATCTTTTGCCTTACTGATAATACCATAATCCCCCTCAATTCAGACCTTCTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR GCA 90 bp GTTATCCTTATTGGCCTTAGAGATACCCAAGATATTATAAAACCAGAGCTGTTAGCTGCTCATAGGCAGTaGCCACCTTGGCACTGCTGC +
Preference number: 4 (lower is better)
Translates to: VILIGLRDTQDIIKPELLAAHRQ*PPWHCC
Trigger: GCAGCAGTGCCAAGGTGGGCACTGCCTATGAGCAGC...TAACAGCTCTGGTTTTATAATATCTTGGGTATCTCTAAGGCCAATAAGGATAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR GCA 90 bp TATTATAAAACCAGAGCTGTTATGTCTGTCACCAGCCCTGCAGGAATTATTCAGTGGCGTTGGAGCTGCTaGTTGACATACCAGAGGAAG +
Preference number: 4 (lower is better)
Translates to: YYKTRAVMSVTSPAGIIQWRWSC*LTYQRK
Trigger: CTTCCTCTGGTATGTCAAGCAGCAGCTCCAACGCCA...CTGAATAATTCCTGCAGGGCTGGTGACAGACATAACAGCTCTGGTTTTATAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR GCA 90 bp AATGTTATCCTTATTGGCCTTAGAGATACCCAAGATATTATAAAACCAGAGCTGTGGACACCACTTCCATaGGCGATGGCCTGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: NVILIGLRDTQDIIKPELWTPLP*AMAWLP
Trigger: GGGAAGCCAGGCCATCGCGCATGGAAGTGGTGTCCA...CAGCTCTGGTTTTATAATATCTTGGGTATCTCTAAGGCCAATAAGGATAACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR GCA 90 bp ATAAAACCAGAGCTGTTATGTCTGTCACCAGCCCTGCAGGAATTATTCAGGAACGATAGGAAACCTCCCTaGCACTATCTCTCTACTGGT +
Preference number: 4 (lower is better)
Translates to: IKPELLCLSPALQELFRNDRKPP*HYLSTG
Trigger: ACCAGTAGAGAGATAGTGGCAGGGAGGTTTCCTATC...GTTCCTGAATAATTCCTGCAGGGCTGGTGACAGACATAACAGCTCTGGTTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR GCA 90 bp GGTAGGAGAAATATTCACAGCAACGTTGGCCCCTTGGTAGCACAGGAAACAGAAGCATCCTTGCAATGTTaGCCATTTTGTGGTCAACAT +
Preference number: 4 (lower is better)
Translates to: GRRNIHSNVGPLVAQETEASLQC*PFCGQH
Trigger: ATGTTGACCACAAAATGGGCAACATTGCAAGGATGC...TTCTGTTTCCTGTGCTACCAAGGGGCCAACGTTGCTGTGAATATTTCTCCTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561370.5
CDS-3UTR GCA 90 bp TATATATCTCTAAATCCAGAGGCACTAGTGGTGTTGGGGAATCGGGTAGGAGAAGATGAAGGTAGCTTCTaGAATCTTGGGAGCAGCCAT +
Preference number: 4 (lower is better)
Translates to: YISLNPEALVVLGNRVGEDEGSF*NLGSSH
Trigger: ATGGCTGCTCCCAAGATTGCAGAAGCTACCTTCATC...TTCTCCTACCCGATTCCCCAACACCACTAGTGCCTCTGGATTTAGAGATATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329153.10
ENST00000559168.1
ENST00000561057.1
CDS-3UTR GCA 90 bp CCAAGATATTATAAAACCAGAGCTGTTATGTCTGTCACCAGCCCTGCAGGAATTGTCTGTCACCAGCCCTaGAGGAATTATTCAGGAACC +
Preference number: 4 (lower is better)
Translates to: PRYYKTRAVMSVTSPAGIVCHQP*RNYSGT
Trigger: GGTTCCTGAATAATTCCTGCAGGGCTGGTGACAGAC...AATTCCTGCAGGGCTGGTGACAGACATAACAGCTCTGGTTTTATAATATCTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329153.10
ENST00000559168.1
CDS-3UTR CCA 90 bp GTTATCCTTATTGGCCTTAGAGATACCCAAGATATTATAAAACCAGAGCTGTTATGGGAGCCACTGTCCTaGCCCATAGGCTGGATTCCC +
Preference number: 4 (lower is better)
Translates to: VILIGLRDTQDIIKPELLWEPLS*PIGWIP
Trigger: GGGAATCCAGCCTATGGGCCAGGACAGTGGCTCCCA...TAACAGCTCTGGTTTTATAATATCTTGGGTATCTCTAAGGCCAATAAGGATAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CCA 90 bp CCCTGTCTATGTCTAGAATCAGGTAGCATCTGGAGTCATTATTCTTATGAAAAACTCATTCTTCCCTGCTaGGGGTGGCTCCTCCATCTC +
Preference number: 4 (lower is better)
Translates to: PCLCLESGSIWSHYSYEKLILPC*GWLLHL
Trigger: GAGATGGAGGAGCCACCCCCAGCAGGGAAGAATGAG...TTTTTCATAAGAATAATGACTCCAGATGCTACCTGATTCTAGACATAGACAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CCA 90 bp GTATCATACCCTAGGATATATATCTCTAAATCCAGAGGCACTAGTGGTGTTGGGAGCTCCAAGGGCCTTTaGGCTCTCTCTTTCCTCATT +
Preference number: 4 (lower is better)
Translates to: VSYPRIYISKSRGTSGVGSSKGL*ALSFLI
Trigger: AATGAGGAAAGAGAGAGCCCAAAGGCCCTTGGAGCT...CCCAACACCACTAGTGCCTCTGGATTTAGAGATATATATCCTAGGGTATGATAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CCA 90 bp ATCAGAAGGTCTGAATTGAGGGGGATTATGGTATTATCAGTAAGGCAAAAGATGTCCCAGGATGAAAACTaGTGCAGCGGGGGTGTAGGT +
Preference number: 4 (lower is better)
Translates to: IRRSELRGIMVLSVRQKMSQDEN*CSGGVG
Trigger: ACCTACACCCCCGCTGCACCAGTTTTCATCCTGGGA...CATCTTTTGCCTTACTGATAATACCATAATCCCCCTCAATTCAGACCTTCTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CCA 90 bp CTTAGAGATACCCAAGATATTATAAAACCAGAGCTGTTATGTCTGTCACCAGCCCAGACCACCTTGGAGTaGCCATGCTTTACCTTGGTC +
Preference number: 4 (lower is better)
Translates to: LRDTQDIIKPELLCLSPAQTTLE*PCFTLV
Trigger: GACCAAGGTAAAGCATGGCCACTCCAAGGTGGTCTG...GGCTGGTGACAGACATAACAGCTCTGGTTTTATAATATCTTGGGTATCTCTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CCA 90 bp GCAGCCATCCGGAAGATCAACTTCTCAATGTGGCTTTTTCCAGAGCTCTTGTCTATGTTGCCCATTTTGTaGTCAACATATCTGCCAGGT +
Preference number: 4 (lower is better)
Translates to: AAIRKINFSMWLFPELLSMLPIL*STYLPG
Trigger: ACCTGGCAGATATGTTGACCACAAAATGGGCAACAT...AGACAAGAGCTCTGGAAAAAGCCACATTGAGAAGTTGATCTTCCGGATGGCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561370.5
CDS-3UTR CCA 90 bp CCAAGATATTATAAAACCAGAGCTGTTATGTCTGTCACCAGCCCTGCAGGAATTACTTGCATAGTGTTGTaGTCCAGGATGCTGACGCCA +
Preference number: 4 (lower is better)
Translates to: PRYYKTRAVMSVTSPAGITCIVL*SRMLTP
Trigger: TGGCGTCAGCATCCTGGACCACAACACTATGCAAGT...AATTCCTGCAGGGCTGGTGACAGACATAACAGCTCTGGTTTTATAATATCTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CCA 90 bp AAACCAGAGCTGTTATGTCTGTCACCAGCCCTGCAGGAATTATTCAGGAACCTGTCCAGAGCTCTTGTCTaGGATAGATCTAATCACAAG +
Preference number: 4 (lower is better)
Translates to: KPELLCLSPALQELFRNLSRALV*DRSNHK
Trigger: CTTGTGATTAGATCTATCCCAGACAAGAGCTCTGGA...CAGGTTCCTGAATAATTCCTGCAGGGCTGGTGACAGACATAACAGCTCTGGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329153.10
ENST00000559168.1
CDS-3UTR CCA 90 bp GCAGCCATCCGGAAGATCAACTTCTCAATGTGGCTTTTTCCAGAGCTCTTGTCTTCCAGAGCTCTTGTCTaGGATAGATCTAATCACAAG +
Preference number: 4 (lower is better)
Translates to: AAIRKINFSMWLFPELLSSRALV*DRSNHK
Trigger: CTTGTGATTAGATCTATCCCAGACAAGAGCTCTGGA...AGACAAGAGCTCTGGAAAAAGCCACATTGAGAAGTTGATCTTCCGGATGGCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561057.1
ENST00000561370.5
CDS-3UTR TCA 90 bp ACCTGTGGTACATGTGACTTGTTCGAGGTAGAAATGTCTCAGCTAGATCCCCAAGTGTCACCCATTCCTTaGTCTTTGCAGCTTTTTCTT +
Preference number: 4 (lower is better)
Translates to: TCGTCDLFEVEMSQLDPQVSPIP*SLQLFL
Trigger: AAGAAAAAGCTGCAAAGATCAAGGAATGGGTGACAC...TTGGGGATCTAGCTGAGACATTTCTACCTCGAACAAGTCACATGTACCACAGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR TCA 90 bp GGGTTAAAGGCTTGGTTTTGGGTGCTACTGCTAAATATACAGTTTTCAGCACTTCTCACCCCAGGAAGCTaGACTACATCTGAAGGTAAG +
Preference number: 4 (lower is better)
Translates to: GLKAWFWVLLLNIQFSALLTPGS*TTSEGK
Trigger: CTTACCTTCAGATGTAGTTCAGCTTCCTGGGGTGAG...AAGTGCTGAAAACTGTATATTTAGCAGTAGCACCCAAAACCAAGCCTTTAACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR TCA 90 bp GTTATCCTTATTGGCCTTAGAGATACCCAAGATATTATAAAACCAGAGCTGTTAGATGGCCCACTACAGTaGACACAGCCTTCACCGAGC +
Preference number: 4 (lower is better)
Translates to: VILIGLRDTQDIIKPELLDGPLQ*TQPSPS
Trigger: GCTCGGTGAAGGCTGTGTTCACTGTAGTGGGCCATC...TAACAGCTCTGGTTTTATAATATCTTGGGTATCTCTAAGGCCAATAAGGATAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CCA 90 bp CTTATTGGCCTTAGAGATACCCAAGATATTATAAAACCAGAGCTGTTATGTCTGTCCATGACACCCACCTaGGTCTCAGCGTTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: LIGLRDTQDIIKPELLCLSMTPT*VSAFSA
Trigger: AGCAGAGAACGCTGAGACCCAGGTGGGTGTCATGGA...CAGACATAACAGCTCTGGTTTTATAATATCTTGGGTATCTCTAAGGCCAATAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CCA 90 bp CCAAGATATTATAAAACCAGAGCTGTTATGTCTGTCACCAGCCCTGCAGGAATTACTGTTTCCCCAGAATaGACCGTGCTGGAACTAGAA +
Preference number: 4 (lower is better)
Translates to: PRYYKTRAVMSVTSPAGITVSPE*TVLELE
Trigger: TTCTAGTTCCAGCACGGTCCATTCTGGGGAAACAGT...AATTCCTGCAGGGCTGGTGACAGACATAACAGCTCTGGTTTTATAATATCTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CCA 90 bp CCCTGTCTATGTCTAGAATCAGGTAGCATCTGGAGTCATTATTCTTATGAAAAAAGCTTCATGCATGGCTaGTGGGGAGGGCTCTCTCTT +
Preference number: 4 (lower is better)
Translates to: PCLCLESGSIWSHYSYEKSFMHG*WGGLSL
Trigger: AAGAGAGAGCCCTCCCCACCAGCCATGCATGAAGCT...TTTTTCATAAGAATAATGACTCCAGATGCTACCTGATTCTAGACATAGACAGGG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CCA 90 bp CCCTGTCTATGTCTAGAATCAGGTAGCATCTGGAGTCATTATTCTTATGAAAAACATCTCCATCTTCTCTaGTTCCTCCCGGGACCTAGC +
Preference number: 4 (lower is better)
Translates to: PCLCLESGSIWSHYSYEKHLHLL*FLPGPS
Trigger: GCTAGGTCCCGGGAGGAACCAGAGAAGATGGAGATG...TTTTTCATAAGAATAATGACTCCAGATGCTACCTGATTCTAGACATAGACAGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CCA 90 bp CCAAGATATTATAAAACCAGAGCTGTTATGTCTGTCACCAGCCCTGCAGGAATTACGTTGATGAAGAGCTaGCAGGACTTGAAGAGCTTG +
Preference number: 4 (lower is better)
Translates to: PRYYKTRAVMSVTSPAGITLMKS*QDLKSL
Trigger: CAAGCTCTTCAAGTCCTGCCAGCTCTTCATCAACGT...AATTCCTGCAGGGCTGGTGACAGACATAACAGCTCTGGTTTTATAATATCTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CCA 90 bp ATCAGAAGGTCTGAATTGAGGGGGATTATGGTATTATCAGTAAGGCAAAAGATGGGATCTGCATGGCGTTaGAGCTGCTGCTTGACATAC +
Preference number: 4 (lower is better)
Translates to: IRRSELRGIMVLSVRQKMGSAWR*SCCLTY
Trigger: GTATGTCAAGCAGCAGCTCCAACGCCATGCAGATCC...CATCTTTTGCCTTACTGATAATACCATAATCCCCCTCAATTCAGACCTTCTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CCA 90 bp CTTATTGGCCTTAGAGATACCCAAGATATTATAAAACCAGAGCTGTTATGTCTGTCCTGGTTCAGCCGCTaGAGGAACTCATCAACCGTG +
Preference number: 4 (lower is better)
Translates to: LIGLRDTQDIIKPELLCLSWFSR*RNSSTV
Trigger: CACGGTTGATGAGTTCCTCCAGCGGCTGAACCAGGA...CAGACATAACAGCTCTGGTTTTATAATATCTTGGGTATCTCTAAGGCCAATAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CCA 90 bp TCTGGGATAGATCTAATCACAAGCATGAAGTCATCCCTGCAGCCACCAAACGTTTCCAGAGCTCTTGTCTaGGATAGATCTAATCACAAG +
Preference number: 4 (lower is better)
Translates to: SGIDLITSMKSSLQPPNVSRALV*DRSNHK
Trigger: CTTGTGATTAGATCTATCCCAGACAAGAGCTCTGGA...AACGTTTGGTGGCTGCAGGGATGACTTCATGCTTGTGATTAGATCTATCCCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561057.1
ENST00000561370.5
CDS-3UTR CCA 90 bp ATATCTCTAAATCCAGAGGCACTAGTGGTGTTGGGGAATCGGGTAGGAGAAATATTGGGGTTAAAGGCTTaGTTTTGGGTGCTACTGCTA +
Preference number: 4 (lower is better)
Translates to: ISLNPEALVVLGNRVGEILGLKA*FWVLLL
Trigger: TAGCAGTAGCACCCAAAACCAAGCCTTTAACCCCAA...TATTTCTCCTACCCGATTCCCCAACACCACTAGTGCCTCTGGATTTAGAGATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CCA 90 bp TATGTCTGTCACCAGCCCTGCAGGAATTATTCAGGAACCTGTGGTACATGTGACAAACACACAGTTACCTaGTTCACAGATAGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: YVCHQPCRNYSGTCGTCDKHTVT*FTDSCF
Trigger: AAAGCAGCTATCTGTGAACCAGGTAACTGTGTGTTT...GTCACATGTACCACAGGTTCCTGAATAATTCCTGCAGGGCTGGTGACAGACATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329153.10
3UTR CAA 72 bp TGCAGGAATTATTCAGGAACCTGTGGTACATGTGACTaGTTCGAGGTAGAAATGTCTCAGCTAGATCCCCAA +
Preference number: 4 (lower is better)
Translates to: CRNYSGTCGTCD*FEVEMSQLDPQ
Trigger: TTGGGGATCTAGCTGAGACATTTCTACCTCGAACAAGTCACATGTACCACAGGTTCCTGAATAATTCCTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329153.10
ENST00000559168.1
3UTR CAA 72 bp GGATATATATCTCTAAATCCAGAGGCACTAGTGGTGTaGGGGAATCGGGTAGGAGAAATATTCACAGCAACG +
Preference number: 4 (lower is better)
Translates to: GYISLNPEALVV*GNRVGEIFTAT
Trigger: CGTTGCTGTGAATATTTCTCCTACCCGATTCCCCAACACCACTAGTGCCTCTGGATTTAGAGATATATATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561057.1
ENST00000561370.5
CDS-3UTR TCA 90 bp CTTCCAAAACACACAGTTACCTGGTTCACAGATAGCTGCTTTTTATTGACAAACTGTAGACAGGCACAGTaGCATTCTTGTAGACCAGGC +
Preference number: 4 (lower is better)
Translates to: LPKHTVTWFTDSCFLLTNCRQAQ*HSCRPG
Trigger: GCCTGGTCTACAAGAATGTCACTGTGCCTGTCTACA...GTTTGTCAATAAAAAGCAGCTATCTGTGAACCAGGTAACTGTGTGTTTTGGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR TCA 90 bp CTTATTGGCCTTAGAGATACCCAAGATATTATAAAACCAGAGCTGTTATGTCTGGAGCTGAAACGTCTGTaGACCCTCCCCTCGAACAAT +
Preference number: 4 (lower is better)
Translates to: LIGLRDTQDIIKPELLCLELKRL*TLPSNN
Trigger: ATTGTTCGAGGGGAGGGTTCACAGACGTTTCAGCTC...CAGACATAACAGCTCTGGTTTTATAATATCTTGGGTATCTCTAAGGCCAATAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR TCA 90 bp CTTATTGGCCTTAGAGATACCCAAGATATTATAAAACCAGAGCTGTTATGTCTGGGTCCGTCTCCCCTTTaGCTTGACTGCGAAAGTACA +
Preference number: 4 (lower is better)
Translates to: LIGLRDTQDIIKPELLCLGPSPL*LDCEST
Trigger: TGTACTTTCGCAGTCAAGTCAAAGGGGAGACGGACC...CAGACATAACAGCTCTGGTTTTATAATATCTTGGGTATCTCTAAGGCCAATAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR TCA 90 bp CCCTGTCTATGTCTAGAATCAGGTAGCATCTGGAGTCATTATTCTTATGAAAAAATCTCTCTACTGGTTTaGGAGGCAAGGAGCAGCCGT +
Preference number: 4 (lower is better)
Translates to: PCLCLESGSIWSHYSYEKISLLV*EARSSR
Trigger: ACGGCTGCTCCTTGCCTCTCAAACCAGTAGAGAGAT...TTTTTCATAAGAATAATGACTCCAGATGCTACCTGATTCTAGACATAGACAGGG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000329153.10
ENST00000561370.5
CDS-3UTR TCA 90 bp ATAAAACCAGAGCTGTTATGTCTGTCACCAGCCCTGCAGGAATTATTCAGGAACGTGAGGAAAACAGCTTaGATCTTAGCAGGTATAGCA +
Preference number: 4 (lower is better)
Translates to: IKPELLCLSPALQELFRNVRKTA*ILAGIA
Trigger: TGCTATACCTGCTAAGATTCAAGCTGTTTTCCTCAC...GTTCCTGAATAATTCCTGCAGGGCTGGTGACAGACATAACAGCTCTGGTTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR TCA 90 bp CTTCCAAAACACACAGTTACCTGGTTCACAGATAGCTGCTTTTTATTGACAAACCCAGGCCCACATGCCTaGAATAGTCTTCTGTGTTTC +
Preference number: 4 (lower is better)
Translates to: LPKHTVTWFTDSCFLLTNPGPHA*NSLLCF
Trigger: GAAACACAGAAGACTATTTCAGGCATGTGGGCCTGG...GTTTGTCAATAAAAAGCAGCTATCTGTGAACCAGGTAACTGTGTGTTTTGGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR GCA 90 bp CCCTGTCTATGTCTAGAATCAGGTAGCATCTGGAGTCATTATTCTTATGAAAAATGGAGTAGGATGAGGTaGGCTGCAGTTTGTGCTCAG +
Preference number: 4 (lower is better)
Translates to: PCLCLESGSIWSHYSYEKWSRMR*AAVCAQ
Trigger: CTGAGCACAAACTGCAGCGCACCTCATCCTACTCCA...TTTTTCATAAGAATAATGACTCCAGATGCTACCTGATTCTAGACATAGACAGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR GCA 90 bp CCCTGTCTATGTCTAGAATCAGGTAGCATCTGGAGTCATTATTCTTATGAAAAATCAGACTTTCCGGGGTaGAGCTCCTTCATGGCTTGT +
Preference number: 4 (lower is better)
Translates to: PCLCLESGSIWSHYSYEKSDFPG*SSFMAC
Trigger: ACAAGCCATGAAGGAGCTGCACCCCGGAAAGTCTGA...TTTTTCATAAGAATAATGACTCCAGATGCTACCTGATTCTAGACATAGACAGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329153.10
ENST00000561370.5
CDS-3UTR GCA 90 bp ATAAAACCAGAGCTGTTATGTCTGTCACCAGCCCTGCAGGAATTATTCAGGAACGCATCCTTGCAATGTTaGCCATTTTGTGGTCAACAT +
Preference number: 4 (lower is better)
Translates to: IKPELLCLSPALQELFRNASLQC*PFCGQH
Trigger: ATGTTGACCACAAAATGGGCAACATTGCAAGGATGC...GTTCCTGAATAATTCCTGCAGGGCTGGTGACAGACATAACAGCTCTGGTTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR GCA 90 bp TATGTCTGTCACCAGCCCTGCAGGAATTATTCAGGAACCTGTGGTACATGTGACAAAGCAGAGTGCATTTaGTTGGTCTTTTACAAGAAG +
Preference number: 4 (lower is better)
Translates to: YVCHQPCRNYSGTCGTCDKAECI*LVFYKK
Trigger: CTTCTTGTAAAAGACCAAGCAAATGCACTCTGCTTT...GTCACATGTACCACAGGTTCCTGAATAATTCCTGCAGGGCTGGTGACAGACATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CCA 90 bp GTTATCCTTATTGGCCTTAGAGATACCCAAGATATTATAAAACCAGAGCTGTTAATCACCAGGGTGCAGTaGGAGGAAAGCAACCGTCTG +
Preference number: 4 (lower is better)
Translates to: VILIGLRDTQDIIKPELLITRVQ*EESNRL
Trigger: CAGACGGTTGCTTTCCTCCCACTGCACCCTGGTGAT...TAACAGCTCTGGTTTTATAATATCTTGGGTATCTCTAAGGCCAATAAGGATAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CCA 90 bp CTTATTGGCCTTAGAGATACCCAAGATATTATAAAACCAGAGCTGTTATGTCTGCCAGAGCGGCGAATCTaGATCTCCTTCACCATCCAT +
Preference number: 4 (lower is better)
Translates to: LIGLRDTQDIIKPELLCLPERRI*ISFTIH
Trigger: ATGGATGGTGAAGGAGATCCAGATTCGCCGCTCTGG...CAGACATAACAGCTCTGGTTTTATAATATCTTGGGTATCTCTAAGGCCAATAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CCA 90 bp TATTATAAAACCAGAGCTGTTATGTCTGTCACCAGCCCTGCAGGAATTATTCAGAAAGCCAGAGTGGGATaGCTTTCTCATGCCTATCTC +
Preference number: 4 (lower is better)
Translates to: YYKTRAVMSVTSPAGIIQKARVG*LSHAYL
Trigger: GAGATAGGCATGAGAAAGCCATCCCACTCTGGCTTT...CTGAATAATTCCTGCAGGGCTGGTGACAGACATAACAGCTCTGGTTTTATAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CCA 90 bp CTTATTGGCCTTAGAGATACCCAAGATATTATAAAACCAGAGCTGTTATGTCTGAGAAAGGCCATTTCCTaGCCACGGTCAGGTAGATGC +
Preference number: 4 (lower is better)
Translates to: LIGLRDTQDIIKPELLCLRKAIS*PRSGRC
Trigger: GCATCTACCTGACCGTGGCCAGGAAATGGCCTTTCT...CAGACATAACAGCTCTGGTTTTATAATATCTTGGGTATCTCTAAGGCCAATAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CCA 90 bp TATTATAAAACCAGAGCTGTTATGTCTGTCACCAGCCCTGCAGGAATTATTCAGTGCTTGCACATTGCGTaGTACTGGGTTTGGCCTAAA +
Preference number: 4 (lower is better)
Translates to: YYKTRAVMSVTSPAGIIQCLHIA*YWVWPK
Trigger: TTTAGGCCAAACCCAGTACCACGCAATGTGCAAGCA...CTGAATAATTCCTGCAGGGCTGGTGACAGACATAACAGCTCTGGTTTTATAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
3UTR CAA 72 bp TGGGTTTGGCCTAAAGTCCAGTGTGAGGAAAACAGCTaGAATCTTAGCAGGTATAGCATGTTATCCTGCAAA +
Preference number: 4 (lower is better)
Translates to: WVWPKVQCEENS*NLSRYSMLSCK
Trigger: TTTGCAGGATAACATGCTATACCTGCTAAGATTCAAGCTGTTTTCCTCACACTGGACTTTAGGCCAAACCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR TCA 90 bp AATGTTATCCTTATTGGCCTTAGAGATACCCAAGATATTATAAAACCAGAGCTGCACCAGCAGCTTCCGTaGAGGAGCTATCTGAATAGC +
Preference number: 4 (lower is better)
Translates to: NVILIGLRDTQDIIKPELHQQLP*RSYLNS
Trigger: GCTATTCAGATAGCTCCTTCACGGAAGCTGCTGGTG...CAGCTCTGGTTTTATAATATCTTGGGTATCTCTAAGGCCAATAAGGATAACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR TCA 90 bp CCCTGTCTATGTCTAGAATCAGGTAGCATCTGGAGTCATTATTCTTATGAAAAAAGCTGGTCTGCTTCATaGGTTGGCAGTAGATCTCAC +
Preference number: 4 (lower is better)
Translates to: PCLCLESGSIWSHYSYEKSWSAS*VGSRSH
Trigger: GTGAGATCTACTGCCAACTCATGAAGCAGACCAGCT...TTTTTCATAAGAATAATGACTCCAGATGCTACCTGATTCTAGACATAGACAGGG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR TCA 90 bp GTTATCCTTATTGGCCTTAGAGATACCCAAGATATTATAAAACCAGAGCTGTTAGTCTCCCCTTTGACTTaGCTGCGAAAGTACAGCCTG +
Preference number: 4 (lower is better)
Translates to: VILIGLRDTQDIIKPELLVSPLT*LRKYSL
Trigger: CAGGCTGTACTTTCGCAGTCAAGTCAAAGGGGAGAC...TAACAGCTCTGGTTTTATAATATCTTGGGTATCTCTAAGGCCAATAAGGATAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR TCA 90 bp ATCAGAAGGTCTGAATTGAGGGGGATTATGGTATTATCAGTAAGGCAAAAGATGGTCCAGTCATTAAAATaGGACAGGGAGGGGTCAGAT +
Preference number: 4 (lower is better)
Translates to: IRRSELRGIMVLSVRQKMVQSLK*DREGSD
Trigger: ATCTGACCCCTCCCTGTCTCATTTTAATGACTGGAC...CATCTTTTGCCTTACTGATAATACCATAATCCCCCTCAATTCAGACCTTCTGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR TCA 90 bp CCAAGATATTATAAAACCAGAGCTGTTATGTCTGTCACCAGCCCTGCAGGAATTAACCTGTGGTACATGTaGCTTGTTCGAGGTAGAAAT +
Preference number: 4 (lower is better)
Translates to: PRYYKTRAVMSVTSPAGINLWYM*LVRGRN
Trigger: ATTTCTACCTCGAACAAGTCACATGTACCACAGGTT...AATTCCTGCAGGGCTGGTGACAGACATAACAGCTCTGGTTTTATAATATCTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329153.10
ENST00000559168.1
CDS-3UTR TCA 90 bp CTGAGGTGTTCAGATAAACTAGTTCTGGCCTCGCAGTTTTTGCCTAGGATATATAACCTGTGGTACATGTaGCTTGTTCGAGGTAGAAAT +
Preference number: 4 (lower is better)
Translates to: LRCSDKLVLASQFLPRIYNLWYM*LVRGRN
Trigger: ATTTCTACCTCGAACAAGTCACATGTACCACAGGTT...ATATATCCTAGGCAAAAACTGCGAGGCCAGAACTAGTTTATCTGAACACCTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559168.1
CDS-3UTR GCA 90 bp ATCAGAAGGTCTGAATTGAGGGGGATTATGGTATTATCAGTAAGGCAAAAGATGGATGAAGGTAGCTTCTaGAATCTTGGGAGCAGCCAT +
Preference number: 4 (lower is better)
Translates to: IRRSELRGIMVLSVRQKMDEGSF*NLGSSH
Trigger: ATGGCTGCTCCCAAGATTGCAGAAGCTACCTTCATC...CATCTTTTGCCTTACTGATAATACCATAATCCCCCTCAATTCAGACCTTCTGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR GCA 90 bp ATCAGAAGGTCTGAATTGAGGGGGATTATGGTATTATCAGTAAGGCAAAAGATGCTGTCTAGTCTCCTCTaGACTCAATCAGAAGGTCTG +
Preference number: 4 (lower is better)
Translates to: IRRSELRGIMVLSVRQKMLSSLL*TQSEGL
Trigger: CAGACCTTCTGATTGAGTGCAGAGGAGACTAGACAG...CATCTTTTGCCTTACTGATAATACCATAATCCCCCTCAATTCAGACCTTCTGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR GCA 90 bp CTTAGAGATACCCAAGATATTATAAAACCAGAGCTGTTATGTCTGTCACCAGCCTGGCCTCGCAGTTTTTaGTGTGCAAAAGATACACAC +
Preference number: 4 (lower is better)
Translates to: LRDTQDIIKPELLCLSPAWPRSF*CAKDTH
Trigger: GTGTGTATCTTTTGCACAGCAAAAACTGCGAGGCCA...GGCTGGTGACAGACATAACAGCTCTGGTTTTATAATATCTTGGGTATCTCTAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR GCA 90 bp TATATATCTCTAAATCCAGAGGCACTAGTGGTGTTGGGGAATCGGGTAGGAGAAGGCTGTAAAACTACTTaGCTTGCAAAGTCAAGTACA +
Preference number: 4 (lower is better)
Translates to: YISLNPEALVVLGNRVGEGCKTT*LAKSST
Trigger: TGTACTTGACTTTGCAAGGCAAGTAGTTTTACAGCC...TTCTCCTACCCGATTCCCCAACACCACTAGTGCCTCTGGATTTAGAGATATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329153.10
ENST00000559168.1
CDS-3UTR CCA 90 bp CTTATTGGCCTTAGAGATACCCAAGATATTATAAAACCAGAGCTGTTATGTCTGAGGAAAGCAACCGTCTaGTTCCTCCAGCCTCATAGT +
Preference number: 4 (lower is better)
Translates to: LIGLRDTQDIIKPELLCLRKATV*FLQPHS
Trigger: ACTATGAGGCTGGAGGAACCAGACGGTTGCTTTCCT...CAGACATAACAGCTCTGGTTTTATAATATCTTGGGTATCTCTAAGGCCAATAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR TCA 90 bp GTTAATAAACAGATCTTCCAAAACACACAGTTACCTGGTTCACAGATAGCTGCTCTCAATCAGAAGGTCTaGATTGAGGGGGATTATGGT +
Preference number: 4 (lower is better)
Translates to: VNKQIFQNTQLPGSQIAALNQKV*IEGDYG
Trigger: ACCATAATCCCCCTCAATTCAGACCTTCTGATTGAG...AGCAGCTATCTGTGAACCAGGTAACTGTGTGTTTTGGAAGATCTGTTTATTAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR GCA 90 bp TATATATCTCTAAATCCAGAGGCACTAGTGGTGTTGGGGAATCGGGTAGGAGAATCGCAGTTTTTGCTGTaGAAAAGATACACACATTGT +
Preference number: 4 (lower is better)
Translates to: YISLNPEALVVLGNRVGESQFLL*KRYTHC
Trigger: ACAATGTGTGTATCTTTTGCACAGCAAAAACTGCGA...TTCTCCTACCCGATTCCCCAACACCACTAGTGCCTCTGGATTTAGAGATATATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR GCA 90 bp CTGAGGTGTTCAGATAAACTAGTTCTGGCCTCGCAGTTTTTGCCTAGGATATATGGCTGTAAAACTACTTaGCTTGCAAAGTCAAGTACA +
Preference number: 4 (lower is better)
Translates to: LRCSDKLVLASQFLPRIYGCKTT*LAKSST
Trigger: TGTACTTGACTTTGCAAGGCAAGTAGTTTTACAGCC...ATATATCCTAGGCAAAAACTGCGAGGCCAGAACTAGTTTATCTGAACACCTCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559168.1
CDS-3UTR CCA 90 bp CTTATTGGCCTTAGAGATACCCAAGATATTATAAAACCAGAGCTGTTATGTCTGGATGGAATCGACTTCTaGATTATTCTGGGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: LIGLRDTQDIIKPELLCLDGIDF*IILGSP
Trigger: AGGGCTCCCCAGAATAATCCAGAAGTCGATTCCATC...CAGACATAACAGCTCTGGTTTTATAATATCTTGGGTATCTCTAAGGCCAATAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CCA 90 bp CTTATTGGCCTTAGAGATACCCAAGATATTATAAAACCAGAGCTGTTATGTCTGGGAACTCATCAACCGTaGAAGAGCCGTCAAAACCAA +
Preference number: 4 (lower is better)
Translates to: LIGLRDTQDIIKPELLCLGTHQP*KSRQNQ
Trigger: TTGGTTTTGACGGCTCTTCCACGGTTGATGAGTTCC...CAGACATAACAGCTCTGGTTTTATAATATCTTGGGTATCTCTAAGGCCAATAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CCA 90 bp CCCTGTCTATGTCTAGAATCAGGTAGCATCTGGAGTCATTATTCTTATGAAAAACCACTATCTCTCTACTaGTTTGAGAGGCAAGGAGCA +
Preference number: 4 (lower is better)
Translates to: PCLCLESGSIWSHYSYEKPLSLY*FERQGA
Trigger: TGCTCCTTGCCTCTCAAACCAGTAGAGAGATAGTGG...TTTTTCATAAGAATAATGACTCCAGATGCTACCTGATTCTAGACATAGACAGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329153.10
ENST00000561370.5
CDS-3UTR CCA 90 bp AGGTGTTCAGATAAACTAGTTCTGGCCTCGCAGTTTTTGCCTAGGATATATATCTCCAGAGCTCTTGTCTaGGATAGATCTAATCACAAG +
Preference number: 4 (lower is better)
Translates to: RCSDKLVLASQFLPRIYISRALV*DRSNHK
Trigger: CTTGTGATTAGATCTATCCCAGACAAGAGCTCTGGA...GATATATATCCTAGGCAAAAACTGCGAGGCCAGAACTAGTTTATCTGAACACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559168.1
CDS-3UTR CCA 90 bp ACCTGTGGTACATGTGACTTGTTCGAGGTAGAAATGTCTCAGCTAGATCCCCAATTTGGTTTTCAGACATaGGACTCTCATGTTAACAAA +
Preference number: 4 (lower is better)
Translates to: TCGTCDLFEVEMSQLDPQFGFQT*DSHVNK
Trigger: TTTGTTAACATGAGAGTCCCATGTCTGAAAACCAAA...TTGGGGATCTAGCTGAGACATTTCTACCTCGAACAAGTCACATGTACCACAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR TCA 90 bp CTTATTGGCCTTAGAGATACCCAAGATATTATAAAACCAGAGCTGTTATGTCTGACCCCAAATTCAGTGTaGACACAGCTCCATTCTTGT +
Preference number: 4 (lower is better)
Translates to: LIGLRDTQDIIKPELLCLTPNSV*TQLHSC
Trigger: ACAAGAATGGAGCTGTGTTCACACTGAATTTGGGGT...CAGACATAACAGCTCTGGTTTTATAATATCTTGGGTATCTCTAAGGCCAATAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329153.10
ENST00000559168.1
CDS-3UTR GCA 90 bp ATCAGAAGGTCTGAATTGAGGGGGATTATGGTATTATCAGTAAGGCAAAAGATGTTCTTGAACAGTTTTTaGTTCCTCTGCCCTCATCTG +
Preference number: 4 (lower is better)
Translates to: IRRSELRGIMVLSVRQKMFLNSF*FLCPHL
Trigger: CAGATGAGGGCAGAGGAAGCAAAAACTGTTCAAGAA...CATCTTTTGCCTTACTGATAATACCATAATCCCCCTCAATTCAGACCTTCTGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR GCA 90 bp CCCTGTCTATGTCTAGAATCAGGTAGCATCTGGAGTCATTATTCTTATGAAAAATATAGCATGTTATCCTaGAAAGACTGCCCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: PCLCLESGSIWSHYSYEKYSMLS*KDCPRR
Trigger: CCTTCTGGGGCAGTCTTTGCAGGATAACATGCTATA...TTTTTCATAAGAATAATGACTCCAGATGCTACCTGATTCTAGACATAGACAGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CCA 90 bp TATATATCTCTAAATCCAGAGGCACTAGTGGTGTTGGGGAATCGGGTAGGAGAAGAATCAGGTAGCATCTaGAGTCATTATTCTTATGAA +
Preference number: 4 (lower is better)
Translates to: YISLNPEALVVLGNRVGEESGSI*SHYSYE
Trigger: TTCATAAGAATAATGACTCCAGATGCTACCTGATTC...TTCTCCTACCCGATTCCCCAACACCACTAGTGCCTCTGGATTTAGAGATATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329153.10
ENST00000561370.5
3UTR CAA 72 bp ATGCCTGAAATAGTCTTCTGTGTTTCTGACTCATTTTaGGTGGTCTTACAGCAGCAAAAAGCAGAGTGCATT +
Preference number: 4 (lower is better)
Translates to: MPEIVFCVSDSF*VVLQQQKAECI
Trigger: AATGCACTCTGCTTTTTGCTGCTGTAAGACCACCAAAAATGAGTCAGAAACACAGAAGACTATTTCAGGCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CCA 90 bp TATTATAAAACCAGAGCTGTTATGTCTGTCACCAGCCCTGCAGGAATTATTCAGTTTCTGACTCATTTTTaGTGGTCTTACAGCAGCAAA +
Preference number: 4 (lower is better)
Translates to: YYKTRAVMSVTSPAGIIQFLTHF*WSYSSK
Trigger: TTTGCTGCTGTAAGACCACCAAAAATGAGTCAGAAA...CTGAATAATTCCTGCAGGGCTGGTGACAGACATAACAGCTCTGGTTTTATAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329153.10
3UTR CAA 72 bp AAAGATACACACATTGTTGGGGTTAAAGGCTTGGTTTaGGGTGCTACTGCTAAATATACAGTTTTCAGCACT +
Preference number: 4 (lower is better)
Translates to: KDTHIVGVKGLV*GATAKYTVFST
Trigger: AGTGCTGAAAACTGTATATTTAGCAGTAGCACCCAAAACCAAGCCTTTAACCCCAACAATGTGTGTATCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR TCA 90 bp CTTATTGGCCTTAGAGATACCCAAGATATTATAAAACCAGAGCTGTTATGTCTGAGTCTTCTGTGTTTCTaGCTCATTTTTGGTGGTCTT +
Preference number: 4 (lower is better)
Translates to: LIGLRDTQDIIKPELLCLSLLCF*LIFGGL
Trigger: AAGACCACCAAAAATGAGTCAGAAACACAGAAGACT...CAGACATAACAGCTCTGGTTTTATAATATCTTGGGTATCTCTAAGGCCAATAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CCA 90 bp GTTATCCTTATTGGCCTTAGAGATACCCAAGATATTATAAAACCAGAGCTGTTAATGTTGCCCATTTTGTaGTCAACATATCTGCCAGGT +
Preference number: 4 (lower is better)
Translates to: VILIGLRDTQDIIKPELLMLPIL*STYLPG
Trigger: ACCTGGCAGATATGTTGACCACAAAATGGGCAACAT...TAACAGCTCTGGTTTTATAATATCTTGGGTATCTCTAAGGCCAATAAGGATAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR TCA 90 bp AATGTTATCCTTATTGGCCTTAGAGATACCCAAGATATTATAAAACCAGAGCTGTTTTCAGCACTTTACTaGCATATAGTAAGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: NVILIGLRDTQDIIKPELFSALY*HIVRLP
Trigger: AGGCAGCCTTACTATATGTCAGTAAAGTGCTGAAAA...CAGCTCTGGTTTTATAATATCTTGGGTATCTCTAAGGCCAATAAGGATAACATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR GCA 90 bp GTTAATAAACAGATCTTCCAAAACACACAGTTACCTGGTTCACAGATAGCTGCTTGGTTCACAGATAGCTaGTTTTTATTGACAAACAAG +
Preference number: 4 (lower is better)
Translates to: VNKQIFQNTQLPGSQIAAWFTDS*FLLTNK
Trigger: CTTGTTTGTCAATAAAAAGCAGCTATCTGTGAACCA...AGCAGCTATCTGTGAACCAGGTAACTGTGTGTTTTGGAAGATCTGTTTATTAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CCA 90 bp CTTCCAAAACACACAGTTACCTGGTTCACAGATAGCTGCTTTTTATTGACAAACTTAAAGGCTTGGTTTTaGGTGCTACTGCTAAATATA +
Preference number: 4 (lower is better)
Translates to: LPKHTVTWFTDSCFLLTNLKAWF*VLLLNI
Trigger: TATATTTAGCAGTAGCACCCAAAACCAAGCCTTTAA...GTTTGTCAATAAAAAGCAGCTATCTGTGAACCAGGTAACTGTGTGTTTTGGAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CCA 90 bp CCCTGTCTATGTCTAGAATCAGGTAGCATCTGGAGTCATTATTCTTATGAAAAAGAATCAGGTAGCATCTaGAGTCATTATTCTTATGAA +
Preference number: 4 (lower is better)
Translates to: PCLCLESGSIWSHYSYEKESGSI*SHYSYE
Trigger: TTCATAAGAATAATGACTCCAGATGCTACCTGATTC...TTTTTCATAAGAATAATGACTCCAGATGCTACCTGATTCTAGACATAGACAGGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329153.10
ENST00000561370.5
CDS CCA 90 bp AGGGGTTACGCAGCAGGATGGACACCACTTCCATGCGCGATGGCCTaGCTTCCCGCTCCCCGGTCCGCAGGGTCCGCTCCACTGCCCGCT +
Preference number: 5 (lower is better)
Translates to: RGYAAGWTPLPCAMA*LPAPRSAGSAPLPA
Trigger: AGCGGGCAGTGGAGCGGACCCTGCGGACCGGGGAGCGGGAAGCCAGGCCATCGCGCATGGAAGTGGTGTCCATCCTGCTGCGTAACCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329153.10
ENST00000557971.5
ENST00000558386.5
ENST00000561370.5
CDS CCA 90 bp GTGGAAGGGGTTACGCAGCAGGATGGACACCACTTCCATGCGCGATaGCCTGGCTTCCCGCTCCCCGGTCCGCAGGGTCCGCTCCACTGC +
Preference number: 5 (lower is better)
Translates to: VEGVTQQDGHHFHAR*PGFPLPGPQGPLHC
Trigger: GCAGTGGAGCGGACCCTGCGGACCGGGGAGCGGGAAGCCAGGCCATCGCGCATGGAAGTGGTGTCCATCCTGCTGCGTAACCCCTTCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329153.10
ENST00000557971.5
ENST00000558386.5
ENST00000561370.5
CDS GCA 90 bp CCCGCGGGGTGCCAGGAGCCCGCACCTTTGGTAGGGTCAGACTGCTaGCAGGACCACCTTCCCTGGCAGAGGTCTTTGTCCCAGGGAGCA +
Preference number: 5 (lower is better)
Translates to: PAGCQEPAPLVGSDC*QDHLPWQRSLSQGA
Trigger: TGCTCCCTGGGACAAAGACCTCTGCCAGGGAAGGTGGTCCTGGCAGCAGTCTGACCCTACCAAAGGTGCGGGCTCCTGGCACCCCGCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS CCA 90 bp TGCAGGGCACCTGGGGAAGGTGCAAGCACAGCTGCCTTCAGACCCTaGGCCTGGGAGCCACTGTCCTGGCCCATAGGCTGGATTCCCGGC +
Preference number: 5 (lower is better)
Translates to: CRAPGEGASTAAFRP*AWEPLSWPIGWIPG
Trigger: GCCGGGAATCCAGCCTATGGGCCAGGACAGTGGCTCCCAGGCCCAGGGTCTGAAGGCAGCTGTGCTTGCACCTTCCCCAGGTGCCCTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS GCA 90 bp TGTCCCGCGGGGTGCCAGGAGCCCGCACCTTTGGTAGGGTCAGACTaGTGCCAGGACCACCTTCCCTGGCAGAGGTCTTTGTCCCAGGGA +
Preference number: 5 (lower is better)
Translates to: CPAGCQEPAPLVGSD*CQDHLPWQRSLSQG
Trigger: TCCCTGGGACAAAGACCTCTGCCAGGGAAGGTGGTCCTGGCAGCAGTCTGACCCTACCAAAGGTGCGGGCTCCTGGCACCCCGCGGGACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS GCA 90 bp GCTGGCTGTGGTGCCTTTTGGCCAACTGGATGCTGTCCCGCGGGGTaGCAGGAGCCCGCACCTTTGGTAGGGTCAGACTGCTGCCAGGAC +
Preference number: 5 (lower is better)
Translates to: AGCGAFWPTGCCPAG*QEPAPLVGSDCCQD
Trigger: GTCCTGGCAGCAGTCTGACCCTACCAAAGGTGCGGGCTCCTGGCACCCCGCGGGACAGCATCCAGTTGGCCAAAAGGCACCACAGCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS CCA 90 bp TCACGGTGGGCTTGGTGCCACCCCGAAGCAGAGCTGGAGGCCCGGTaGCCTGCACCTTCAGCAGGCTCTGGAGTACTCGGATCCACTCCT +
Preference number: 5 (lower is better)
Translates to: SRWAWCHPEAELEAR*PAPSAGSGVLGSTP
Trigger: AGGAGTGGATCCGAGTACTCCAGAGCCTGCTGAAGGTGCAGGCCACCGGGCCTCCAGCTCTGCTTCGGGGTGGCACCAAGCCCACCGTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329153.10
ENST00000557971.5
ENST00000558386.5
ENST00000558981.5
CDS CCA 90 bp CCTTGGAGTGGCCATGCTTTACCTTGGTCAGCCAGCCCTTCACGGTaGGCTTGGTGCCACCCCGAAGCAGAGCTGGAGGCCCGGTGGCCT +
Preference number: 5 (lower is better)
Translates to: PWSGHALPWSASPSR*AWCHPEAELEARWP
Trigger: AGGCCACCGGGCCTCCAGCTCTGCTTCGGGGTGGCACCAAGCCCACCGTGAAGGGCTGGCTGACCAAGGTAAAGCATGGCCACTCCAAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329153.10
ENST00000557971.5
ENST00000558386.5
ENST00000558981.5
CDS CCA 90 bp AGCCCGACTTCTCCAGTGACTCCCCGCCCAGGCCCAGCCCGTCGGTaGAGTAGGATGAGGTGCGCTGCAGTTTGTGCTCAGGCTCTGAGT +
Preference number: 5 (lower is better)
Translates to: SPTSPVTPRPGPARR*SRMRCAAVCAQALS
Trigger: ACTCAGAGCCTGAGCACAAACTGCAGCGCACCTCATCCTACTCCACCGACGGGCTGGGCCTGGGCGGGGAGTCACTGGAGAAGTCGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329153.10
ENST00000557971.5
ENST00000558386.5
ENST00000558981.5
ENST00000561135.1
ENST00000561456.5
CDS GCA 90 bp GTGACTCCCCGCCCAGGCCCAGCCCGTCGGTGGAGTAGGATGAGGTaGGCTGCAGTTTGTGCTCAGGCTCTGAGTAGTCACTGTCCAGTG +
Preference number: 5 (lower is better)
Translates to: VTPRPGPARRWSRMR*AAVCAQALSSHCPV
Trigger: CACTGGACAGTGACTACTCAGAGCCTGAGCACAAACTGCAGCGCACCTCATCCTACTCCACCGACGGGCTGGGCCTGGGCGGGGAGTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329153.10
ENST00000557971.5
ENST00000558386.5
ENST00000558981.5
ENST00000561135.1
ENST00000561456.5
CDS CCA 90 bp GCAAGCACAGCTGCCTTCAGACCCTGGGCCTGGGAGCCACTGTCCTaGCCCATAGGCTGGATTCCCGGCTCTGAAGGGACAGAATCCTGC +
Preference number: 5 (lower is better)
Translates to: ASTAAFRPWAWEPLS*PIGWIPGSEGTESC
Trigger: GCAGGATTCTGTCCCTTCAGAGCCGGGAATCCAGCCTATGGGCCAGGACAGTGGCTCCCAGGCCCAGGGTCTGAAGGCAGCTGTGCTTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS CCA 90 bp CTCATTCTTCCCTGCTGGGGGTGGCTCCTCCATCTCCATCTTCTCTaGTTCCTCCCGGGACCTAGCTCGGGACTCCAGCTCAGGAAGGCC +
Preference number: 5 (lower is better)
Translates to: LILPCWGWLLHLHLL*FLPGPSSGLQLRKA
Trigger: GGCCTTCCTGAGCTGGAGTCCCGAGCTAGGTCCCGGGAGGAACCAGAGAAGATGGAGATGGAGGAGCCACCCCCAGCAGGGAAGAATGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS CCA 90 bp GTCCTCTCCCAACCCTGCAGCTTGCACTCCTGGTCCAAGTGCCCATaGTGTGGCCAACCCCCAGCCGGGACTCTGAACAGACAACTGTCC +
Preference number: 5 (lower is better)
Translates to: VLSQPCSLHSWSKCP*CGQPPAGTLNRQLS
Trigger: GGACAGTTGTCTGTTCAGAGTCCCGGCTGGGGGTTGGCCACACCATGGGCACTTGGACCAGGAGTGCAAGCTGCAGGGTTGGGAGAGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557971.5
ENST00000558981.5
CDS CCA 90 bp TCAGGCTGCAAAACAGTCCTCTCCCAACCCTGCAGCTTGCACTCCTaGTCCAAGTGCCCATGGTGTGGCCAACCCCCAGCCGGGACTCTG +
Preference number: 5 (lower is better)
Translates to: SGCKTVLSQPCSLHS*SKCPWCGQPPAGTL
Trigger: CAGAGTCCCGGCTGGGGGTTGGCCACACCATGGGCACTTGGACCAGGAGTGCAAGCTGCAGGGTTGGGAGAGGACTGTTTTGCAGCCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000557971.5
ENST00000558981.5
CDS TCA 90 bp GGTCCCCAAAGCAGCTGCCCATCACGACTGAATGCCTGCCCACTGTaGCCCTCGCTCCTTGCCACTAGGGGGCCAGAAAGCTACACCACA +
Preference number: 5 (lower is better)
Translates to: GPQSSCPSRLNACPL*PSLLATRGPESYTT
Trigger: TGTGGTGTAGCTTTCTGGCCCCCTAGTGGCAAGGAGCGAGGGTCACAGTGGGCAGGCATTCAGTCGTGATGGGCAGCTGCTTTGGGGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000557971.5
ENST00000558981.5
CDS CCA 90 bp AGGTCCCTGCCCGAGGGATCGTCCGTGAAGAGGGCAAAGCCAGAGTaGGATGGCTTTCTCATGCCTATCTCCTGGTTCAGCCGCTGGAGG +
Preference number: 5 (lower is better)
Translates to: RSLPEGSSVKRAKPE*DGFLMPISWFSRWR
Trigger: CCTCCAGCGGCTGAACCAGGAGATAGGCATGAGAAAGCCATCCCACTCTGGCTTTGCCCTCTTCACGGACGATCCCTCGGGCAGGGACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329153.10
ENST00000557971.5
ENST00000558296.1
ENST00000558386.5
ENST00000560100.1
ENST00000561370.5
CDS CCA 90 bp CTCCCAACCCTGCAGCTTGCACTCCTGGTCCAAGTGCCCATGGTGTaGCCAACCCCCAGCCGGGACTCTGAACAGACAACTGTCCAGTGT +
Preference number: 5 (lower is better)
Translates to: LPTLQLALLVQVPMV*PTPSRDSEQTTVQC
Trigger: ACACTGGACAGTTGTCTGTTCAGAGTCCCGGCTGGGGGTTGGCCACACCATGGGCACTTGGACCAGGAGTGCAAGCTGCAGGGTTGGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557971.5
ENST00000558981.5
CDS GCA 90 bp TGTAGCTCTCTGCAAGACAGGCCCCTCCCTCACTGCAGCTCAGGCTaGAAAACAGTCCTCTCCCAACCCTGCAGCTTGCACTCCTGGTCC +
Preference number: 5 (lower is better)
Translates to: CSSLQDRPLPHCSSG*KTVLSQPCSLHSWS
Trigger: GGACCAGGAGTGCAAGCTGCAGGGTTGGGAGAGGACTGTTTTGCAGCCTGAGCTGCAGTGAGGGAGGGGCCTGTCTTGCAGAGAGCTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557971.5
ENST00000558981.5
CDS CCA 90 bp GAGAAGGCCTCAGTCTCAATGTTCACCACACGGCCAAAGTGCCCATaGCCCACCTGGGGCTGGCTGTGGTGCCTTTTGGCCAACTGGATG +
Preference number: 5 (lower is better)
Translates to: EKASVSMFTTRPKCP*PTWGWLWCLLANWM
Trigger: CATCCAGTTGGCCAAAAGGCACCACAGCCAGCCCCAGGTGGGCCATGGGCACTTTGGCCGTGTGGTGAACATTGAGACTGAGGCCTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS CCA 90 bp CCTGCCCGAGGGATCGTCCGTGAAGAGGGCAAAGCCAGAGTGGGATaGCTTTCTCATGCCTATCTCCTGGTTCAGCCGCTGGAGGAACTC +
Preference number: 5 (lower is better)
Translates to: PARGIVREEGKARVG*LSHAYLLVQPLEEL
Trigger: GAGTTCCTCCAGCGGCTGAACCAGGAGATAGGCATGAGAAAGCCATCCCACTCTGGCTTTGCCCTCTTCACGGACGATCCCTCGGGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329153.10
ENST00000557971.5
ENST00000558296.1
ENST00000558386.5
ENST00000560100.1
ENST00000561370.5
CDS GCA 90 bp GAATCCTCCAAGGGGCTTGCTGCTTCAGAAACAGAGTCCTTGCTCTaGAGGGCACCTGGGGAAGGTGCAAGCACAGCTGCCTTCAGACCC +
Preference number: 5 (lower is better)
Translates to: ESSKGLAASETESLL*RAPGEGASTAAFRP
Trigger: GGGTCTGAAGGCAGCTGTGCTTGCACCTTCCCCAGGTGCCCTGCAGAGCAAGGACTCTGTTTCTGAAGCAGCAAGCCCCTTGGAGGATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS GCA 90 bp AAAACAGTCCTCTCCCAACCCTGCAGCTTGCACTCCTGGTCCAAGTaGCCATGGTGTGGCCAACCCCCAGCCGGGACTCTGAACAGACAA +
Preference number: 5 (lower is better)
Translates to: KTVLSQPCSLHSWSK*PWCGQPPAGTLNRQ
Trigger: TTGTCTGTTCAGAGTCCCGGCTGGGGGTTGGCCACACCATGGGCACTTGGACCAGGAGTGCAAGCTGCAGGGTTGGGAGAGGACTGTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000557971.5
ENST00000558981.5
CDS CCA 90 bp GTCCCGTTGGTAAAGTGCACGGGGATGCTGAAGGGCAAGGAGTGGTaGAAGGGGTTACGCAGCAGGATGGACACCACTTCCATGCGCGAT +
Preference number: 5 (lower is better)
Translates to: VPLVKCTGMLKGKEW*KGLRSRMDTTSMRD
Trigger: ATCGCGCATGGAAGTGGTGTCCATCCTGCTGCGTAACCCCTTCCACCACTCCTTGCCCTTCAGCATCCCCGTGCACTTTACCAACGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329153.10
ENST00000557971.5
ENST00000558386.5
ENST00000561370.5
CDS CCA 90 bp GACCTCCATGCTTCTCAGGCCTCCCTTCCCACACACCATCTTCTGTaGTCCCCAAAGCAGCTGCCCATCACGACTGAATGCCTGCCCACT +
Preference number: 5 (lower is better)
Translates to: DLHASQASLPTHHLL*SPKQLPITTECLPT
Trigger: AGTGGGCAGGCATTCAGTCGTGATGGGCAGCTGCTTTGGGGACCACAGAAGATGGTGTGTGGGAAGGGAGGCCTGAGAAGCATGGAGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557971.5
ENST00000558981.5
CDS-3UTR CAA 90 bp TGTACCCTCACCCTCAAACTAATTCCCAGCAGAAGTTTGCCAGAAGTCTCAAGGCCGCCGCAGCCGACCTaGCGTCGCTCTCGCCGGAGT +
Preference number: 5 (lower is better)
Translates to: CTLTLKLIPSRSLPEVSRPPQPT*RRSRRS
Trigger: ACTCCGGCGAGAGCGACGCAAGGTCGGCTGCGGCGG...CCTTGAGACTTCTGGCAAACTTCTGCTGGGAATTAGTTTGAGGGTGAGGGTACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CAA 90 bp AACTGTCGTCCATCCAGTTCCCACAGCTGGCAGGCTCCGGGTGGGTTGGTGGGGATGGCTTGTTCCCACTaGGAGATGGCATCACAGATC +
Preference number: 5 (lower is better)
Translates to: NCRPSSSHSWQAPGGLVGMACSH*EMASQI
Trigger: GATCTGTGATGCCATCTCCAAGTGGGAACAAGCCAT...CCCCACCAACCCACCCGGAGCCTGCCAGCTGTGGGAACTGGATGGACGACAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561370.5
CDS-3UTR CAA 90 bp AACTGTCGTCCATCCAGTTCCCACAGCTGGCAGGCTCCGGGTGGGTTGGTGGGGAGAGCCAATTCCTTGTaGATAGGAAACCTCCCTGCC +
Preference number: 5 (lower is better)
Translates to: NCRPSSSHSWQAPGGLVGRANSL*IGNLPA
Trigger: GGCAGGGAGGTTTCCTATCAACAAGGAATTGGCTCT...CCCCACCAACCCACCCGGAGCCTGCCAGCTGTGGGAACTGGATGGACGACAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561370.5
CDS-3UTR CAA 90 bp CAGAAGAAAAGAACTGTCGTCCATCCAGTTCCCACAGCTGGCAGGCTCCGGGTGACCAGAGCGTTCTCCTaGGAAGACAGCTGGGCAGGC +
Preference number: 5 (lower is better)
Translates to: QKKRTVVHPVPTAGRLRVTRAFS*EDSWAG
Trigger: GCCTGCCCAGCTGTCTTCCAAGGAGAACGCTCTGGT...CACCCGGAGCCTGCCAGCTGTGGGAACTGGATGGACGACAGTTCTTTTCTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561057.1
ENST00000561370.5
CDS TCA 90 bp TGGTTTGAGAGGCAAGGAGCAGCCGTTCTCGGTCCGTCTCCCCTTTaGCTTGACTGCGAAAGTACAGCCCTCAGACTTTCCGGGGTGCAG +
Preference number: 5 (lower is better)
Translates to: WFERQGAAVLGPSPL*LDCESTALRLSGVQ
Trigger: CTGCACCCCGGAAAGTCTGAGGGCTGTACTTTCGCAGTCAAGTCAAAGGGGAGACGGACCGAGAACGGCTGCTCCTTGCCTCTCAAACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561370.5
CDS GCA 90 bp GCGTTTCTGCCAGTCTACGCTGGCCGGCGCCTCCACCTTGAGTTCTaGCATGATGGAATCGACTTCTGGATTATTCTGGGGAGCCCTCCA +
Preference number: 5 (lower is better)
Translates to: AFLPVYAGRRLHLEF*HDGIDFWIILGSPP
Trigger: TGGAGGGCTCCCCAGAATAATCCAGAAGTCGATTCCATCATGGCAGAACTCAAGGTGGAGGCGCCGGCCAGCGTAGACTGGCAGAAACGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CAA 90 bp GCCCAGTGGTGTGGGCTCCTGTTGGTCTGGAGATCCTCTCAGATGCACAGTGCCTATCTCTCTACTGGTTaGAGAGGCAAGGAGCAGCCG +
Preference number: 5 (lower is better)
Translates to: AQWCGLLLVWRSSQMHSAYLSTG*RGKEQP
Trigger: CGGCTGCTCCTTGCCTCTCAAACCAGTAGAGAGATA...GGCACTGTGCATCTGAGAGGATCTCCAGACCAACAGGAGCCCACACCACTGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561370.5
CDS-3UTR CAA 90 bp AAGGCCATTTCCTGGCCACGGTCAGGTAGATGCGGATGCACTCAGGAGGGGAGCTGCACTTGCATAGTGTaGTGGTCCAGGATGCTGACG +
Preference number: 5 (lower is better)
Translates to: KAISWPRSGRCGCTQEGSCTCIV*WSRMLT
Trigger: CGTCAGCATCCTGGACCACAACACTATGCAAGTGCA...GCTCCCCTCCTGAGTGCATCCGCATCTACCTGACCGTGGCCAGGAAATGGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561370.5
CDS-3UTR CAA 90 bp AAGGCCATTTCCTGGCCACGGTCAGGTAGATGCGGATGCACTCAGGAGGGGAGCAGCAACGTTGGCCCCTaGGTAGCACAGGAAACAGAA +
Preference number: 5 (lower is better)
Translates to: KAISWPRSGRCGCTQEGSSNVGP*VAQETE
Trigger: TTCTGTTTCCTGTGCTACCAAGGGGCCAACGTTGCT...GCTCCCCTCCTGAGTGCATCCGCATCTACCTGACCGTGGCCAGGAAATGGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561370.5
CDS TCA 90 bp GTCTTCCTGGACTCAGAGGAGGGGACCGAGATTCGGAAACTCGCCTaGGAGCTGCAGTCATCGTCAGACCCAGAGGACTCGTCCATAAAG +
Preference number: 5 (lower is better)
Translates to: VFLDSEEGTEIRKLA*ELQSSSDPEDSSIK
Trigger: CTTTATGGACGAGTCCTCTGGGTCTGACGATGACTGCAGCTCTCAGGCGAGTTTCCGAATCTCGGTCCCCTCCTCTGAGTCCAGGAAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329153.10
ENST00000557971.5
ENST00000558386.5
ENST00000558981.5
ENST00000561456.5
CDS TCA 90 bp CAGCAGGCTCTGGAGTACTCGGATCCACTCCTCCAGCAGGCTGGGTaGATCGGCCGTCAGGTAGTAGGTTTTCTTCTCAGAGATGAGCTG +
Preference number: 5 (lower is better)
Translates to: QQALEYSDPLLQQAG*IGRQVVGFLLRDEL
Trigger: CAGCTCATCTCTGAGAAGAAAACCTACTACCTGACGGCCGATTCACCCAGCCTGCTGGAGGAGTGGATCCGAGTACTCCAGAGCCTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329153.10
ENST00000557971.5
ENST00000558386.5
ENST00000558981.5
CDS GCA 90 bp TACATCAGCTTCACGACGCGTGTCCCACCCTCAGACTTTCCGGGGTaGAGCTCCTTCATGGCTTGTTCCCACTTGGAGATGGCATCACAG +
Preference number: 5 (lower is better)
Translates to: YISFTTRVPPSDFPG*SSFMACSHLEMASQ
Trigger: CTGTGATGCCATCTCCAAGTGGGAACAAGCCATGAAGGAGCTGCACCCCGGAAAGTCTGAGGGTGGGACACGCGTCGTGAAGCTGATGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329153.10
ENST00000557971.5
ENST00000558366.5
ENST00000558386.5
ENST00000560100.1
CDS CCA 90 bp GGCTCAGCACCAAATGAGCTACCAAACAGTCAGACACCCATCAGATaGGCTCTTTCCCCACCACCAATATCCCTGAGCAGGGAGGGGCTC +
Preference number: 5 (lower is better)
Translates to: GSAPNELPNSQTPIR*ALSPPPISLSREGL
Trigger: GAGCCCCTCCCTGCTCAGGGATATTGGTGGTGGGGAAAGAGCCCATCTGATGGGTGTCTGACTGTTTGGTAGCTCATTTGGTGCTGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558296.1
CDS TCA 90 bp GGAGGAAAGCAACCGTCTGGTTCCTCCAGCCTCATAGTCCTCGTCTaGGTCACAGGATCGATCTACTTCCTCTATGTGCGCATCCCGCAC +
Preference number: 5 (lower is better)
Translates to: GGKQPSGSSSLIVLV*VTGSIYFLYVRIPH
Trigger: GTGCGGGATGCGCACATAGAGGAAGTAGATCGATCCTGTGACTCAGACGAGGACTATGAGGCTGGAGGAACCAGACGGTTGCTTTCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329153.10
ENST00000557971.5
ENST00000558386.5
CDS TCA 90 bp AGAGCGGCGAATCTGGATCTCCTTCACCATCCATCAGTTTTCCAATaGGCTGCTCATAGGCAGTGCCCACCTTGGCACTGCTGCCACCTG +
Preference number: 5 (lower is better)
Translates to: RAANLDLLHHPSVFQ*AAHRQCPPWHCCHL
Trigger: CAGGTGGCAGCAGTGCCAAGGTGGGCACTGCCTATGAGCAGCTCATTGGAAAACTGATGGATGGTGAAGGAGATCCAGATTCGCCGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329153.10
ENST00000557971.5
ENST00000558386.5
CDS GCA 90 bp AATGAGCTGCTCATAGGCAGTGCCCACCTTGGCACTGCTGCCACCTaGAGCCACTGTGAGGTGGTAGAGCCACGTATCCTTTTCATGCTT +
Preference number: 5 (lower is better)
Translates to: NELLIGSAHLGTAAT*SHCEVVEPRILFML
Trigger: AAGCATGAAAAGGATACGTGGCTCTACCACCTCACAGTGGCTGCAGGTGGCAGCAGTGCCAAGGTGGGCACTGCCTATGAGCAGCTCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329153.10
ENST00000557971.5
ENST00000558386.5
CDS GCA 90 bp GAGGACTCGTCCATAAAGGGCATGTTGCTGATCTGTGTAGCTCTCTaGAAGACAGGCCCCTCCCTCACTGCAGCTCAGGCTGCAAAACAG +
Preference number: 5 (lower is better)
Translates to: EDSSIKGMLLICVAL*KTGPSLTAAQAAKQ
Trigger: CTGTTTTGCAGCCTGAGCTGCAGTGAGGGAGGGGCCTGTCTTGCAGAGAGCTACACAGATCAGCAACATGCCCTTTATGGACGAGTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557971.5
ENST00000558981.5
CDS CCA 90 bp CTGCTGCTTGACATACCAGAGGAAGTGATGCTGAGGCAGGAAAAGTaGAGCACACAGAGCGAGGAGCTGCCAGCACTGCATGAGGGAGTA +
Preference number: 5 (lower is better)
Translates to: LLLDIPEEVMLRQEK*STQSEELPALHEGV
Trigger: TACTCCCTCATGCAGTGCTGGCAGCTCCTCGCTCTGTGTGCTCCACTTTTCCTGCCTCAGCATCACTTCCTCTGGTATGTCAAGCAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329153.10
ENST00000557971.5
ENST00000558386.5
CDS CCA 90 bp AAGAGGGCAAAGCCAGAGTGGGATGGCTTTCTCATGCCTATCTCCTaGTTCAGCCGCTGGAGGAACTCATCAACCGTGGAAGAGCCGTCA +
Preference number: 5 (lower is better)
Translates to: KRAKPEWDGFLMPIS*FSRWRNSSTVEEPS
Trigger: TGACGGCTCTTCCACGGTTGATGAGTTCCTCCAGCGGCTGAACCAGGAGATAGGCATGAGAAAGCCATCCCACTCTGGCTTTGCCCTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329153.10
ENST00000557971.5
ENST00000558296.1
ENST00000558386.5
ENST00000560100.1
ENST00000561370.5
CDS CCA 90 bp TCATGCCTATCTCCTGGTTCAGCCGCTGGAGGAACTCATCAACCGTaGAAGAGCCGTCAAAACCAACCACCTGAGGCGGGAGAAGAGTTC +
Preference number: 5 (lower is better)
Translates to: SCLSPGSAAGGTHQP*KSRQNQPPEAGEEF
Trigger: GAACTCTTCTCCCGCCTCAGGTGGTTGGTTTTGACGGCTCTTCCACGGTTGATGAGTTCCTCCAGCGGCTGAACCAGGAGATAGGCATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560100.1
CDS-3UTR CAA 90 bp CCAGAGCTGTTATGTCTGTCACCAGCCCTGCAGGAATTATTCAGGAACCTGTGGGCCGGCGCCTCCACCTaGAGTTCTGCCATGATGGAA +
Preference number: 5 (lower is better)
Translates to: PELLCLSPALQELFRNLWAGAST*SSAMME
Trigger: TTCCATCATGGCAGAACTCAAGGTGGAGGCGCCGGC...CCACAGGTTCCTGAATAATTCCTGCAGGGCTGGTGACAGACATAACAGCTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CAA 90 bp CAGGTAGATGCGGATGCACTCAGGAGGGGAGCATCCTTGCAATGTTGCCCATTTTGGTGTGGGCTCCTGTaGGTCTGGAGATCCTCTCAG +
Preference number: 5 (lower is better)
Translates to: QVDADALRRGASLQCCPFWCGLL*VWRSSQ
Trigger: CTGAGAGGATCTCCAGACCAACAGGAGCCCACACCA...AAATGGGCAACATTGCAAGGATGCTCCCCTCCTGAGTGCATCCGCATCTACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561370.5
CDS TCA 90 bp GAGCATCCCTCTCTGAGCAGTAACCAGACCCTCACCCCAGGAAGCTaGACTACATCTGAAGGTAAGAAGCTTCATGCATGGCTGGTGGGG +
Preference number: 5 (lower is better)
Translates to: EHPSLSSNQTLTPGS*TTSEGKKLHAWLVG
Trigger: CCCCACCAGCCATGCATGAAGCTTCTTACCTTCAGATGTAGTTCAGCTTCCTGGGGTGAGGGTCTGGTTACTGCTCAGAGAGGGATGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS TCA 90 bp GGCTCCTGTTGGTCTGGAGATCCTCTCAGATGCACAGTGCCCTTCTaGGAAAAGGAGGCCCAGTGTTCTGCTCTGGTTAGCTCTACAACC +
Preference number: 5 (lower is better)
Translates to: GSCWSGDPLRCTVPF*EKEAQCSALVSSTT
Trigger: GGTTGTAGAGCTAACCAGAGCAGAACACTGGGCCTCCTTTTCTCAGAAGGGCACTGTGCATCTGAGAGGATCTCCAGACCAACAGGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558214.1
CDS GCA 90 bp CGCAGCATGCAGTATTACTTCTGGGAGACATATCTGAGAGCCGCATaGCCGATGTGGCCACAGCATAGATCCGGCTCTCCCAGGATGAAA +
Preference number: 5 (lower is better)
Translates to: RSMQYYFWETYLRAA*PMWPQHRSGSPRMK
Trigger: TTTCATCCTGGGAGAGCCGGATCTATGCTGTGGCCACATCGGGCATGCGGCTCTCAGATATGTCTCCCAGAAGTAATACTGCATGCTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS GCA 90 bp TCCCTAGAACCCATGCTGCCACAGCACACTGGATGGAAAGCTCTGTaGTACAGAATAGAGGCCAGCCCTAGCTGCTCTGTTAGGGGAATG +
Preference number: 5 (lower is better)
Translates to: SLEPMLPQHTGWKAL*YRIEASPSCSVRGM
Trigger: CATTCCCCTAACAGAGCAGCTAGGGCTGGCCTCTATTCTGTAGCACAGAGCTTTCCATCCAGTGTGCTGTGGCAGCATGGGTTCTAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559766.1
CDS-3UTR CAA 90 bp AGGAGAAGCTTACAGCAGCTGAGGTGTTCAGATAAACTAGTTCTGGCCTCGCAGGCTTCCACCGGCACGTaGATGAAGAGCTGGCAGGAC +
Preference number: 5 (lower is better)
Translates to: RRSLQQLRCSDKLVLASQASTGT*MKSWQD
Trigger: GTCCTGCCAGCTCTTCATCAACGTGCCGGTGGAAGC...CTGCGAGGCCAGAACTAGTTTATCTGAACACCTCAGCTGCTGTAAGCTTCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CAA 90 bp GTTGCCCATTTTGTGGTCAACATATCTGCCAGGTGCCTCAGCTGTTCAGCGGGGATGGCATCACAGATCTaGACACTTCCCTGCAGGCAG +
Preference number: 5 (lower is better)
Translates to: VAHFVVNISARCLSCSAGMASQI*TLPCRQ
Trigger: CTGCCTGCAGGGAAGTGTCAAGATCTGTGATGCCAT...CCCCGCTGAACAGCTGAGGCACCTGGCAGATATGTTGACCACAAAATGGGCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561370.5
CDS-3UTR CAA 90 bp GCTGAGGCAGGAGAATTGCTTGAACCCTGTGGACTGGGTGACATAGTGACACTGCAGCTCCTTCATGGCTaGTTCCCACTTGGAGATGGC +
Preference number: 5 (lower is better)
Translates to: AEAGELLEPCGLGDIVTLQLLHG*FPLGDG
Trigger: GCCATCTCCAAGTGGGAACAAGCCATGAAGGAGCTG...CAGTGTCACTATGTCACCCAGTCCACAGGGTTCAAGCAATTCTCCTGCCTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CAA 90 bp GTGGTGTTGGGGAATCGGGTAGGAGAAATATTCACAGCAACGTTGGCCCCTTGGCAGCTCCTTCATGGCTaGTTCCCACTTGGAGATGGC +
Preference number: 5 (lower is better)
Translates to: VVLGNRVGEIFTATLAPWQLLHG*FPLGDG
Trigger: GCCATCTCCAAGTGGGAACAAGCCATGAAGGAGCTG...CCAAGGGGCCAACGTTGCTGTGAATATTTCTCCTACCCGATTCCCCAACACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561370.5
CDS TCA 90 bp TCCTTGTTGATAGGAAACCTCCCTGCCACTATCTCTCTACTGGTTTaGGAGGCAAGGAGCAGCCGTTCTCGGTCCGTCTCCCCTTTGACT +
Preference number: 5 (lower is better)
Translates to: SLLIGNLPATISLLV*EARSSRSRSVSPLT
Trigger: AGTCAAAGGGGAGACGGACCGAGAACGGCTGCTCCTTGCCTCTCAAACCAGTAGAGAGATAGTGGCAGGGAGGTTTCCTATCAACAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329153.10
ENST00000557971.5
ENST00000558366.5
ENST00000558386.5
ENST00000559981.1
ENST00000561370.5
CDS GCA 90 bp CGCAGCATGCAGTATTACTTCTGGGAGACATATCTGAGAGCCGCATaGCCGATGTGGCCACAGCATAGATCCGGCTCTCCTGAAACAAGA +
Preference number: 5 (lower is better)
Translates to: RSMQYYFWETYLRAA*PMWPQHRSGSPETR
Trigger: TCTTGTTTCAGGAGAGCCGGATCTATGCTGTGGCCACATCGGGCATGCGGCTCTCAGATATGTCTCCCAGAAGTAATACTGCATGCTGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558386.5
CDS CCA 90 bp CAGTATTACTTCTGGGAGACATATCTGAGAGCCGCATGCCCGATGTaGCCACAGCATAGATCCGGCTCTCCCAGGATGAAAACTGGTGCA +
Preference number: 5 (lower is better)
Translates to: QYYFWETYLRAACPM*PQHRSGSPRMKTGA
Trigger: TGCACCAGTTTTCATCCTGGGAGAGCCGGATCTATGCTGTGGCCACATCGGGCATGCGGCTCTCAGATATGTCTCCCAGAAGTAATACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS CCA 90 bp CAGTATTACTTCTGGGAGACATATCTGAGAGCCGCATGCCCGATGTaGCCACAGCATAGATCCGGCTCTCCTGAAACAAGAGGTCTCAGG +
Preference number: 5 (lower is better)
Translates to: QYYFWETYLRAACPM*PQHRSGSPETRGLR
Trigger: CCTGAGACCTCTTGTTTCAGGAGAGCCGGATCTATGCTGTGGCCACATCGGGCATGCGGCTCTCAGATATGTCTCCCAGAAGTAATACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558386.5
CDS-3UTR CAA 90 bp AGGAGAAGCTTACAGCAGCTGAGGTGTTCAGATAAACTAGTTCTGGCCTCGCAGAGCAGCTCCCTTATCTaGCTGGCCTGTAGGCGGAAC +
Preference number: 5 (lower is better)
Translates to: RRSLQQLRCSDKLVLASQSSSLI*LACRRN
Trigger: GTTCCGCCTACAGGCCAGCAAGATAAGGGAGCTGCT...CTGCGAGGCCAGAACTAGTTTATCTGAACACCTCAGCTGCTGTAAGCTTCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CAA 90 bp AAGTTTGCCAGAAGTCTCAAGGAGCATATCCAGGCCCACATGCCTGAAATAGTCGCGCACCAGACCACCTaGGAGTGGCCATGCTTTACC +
Preference number: 5 (lower is better)
Translates to: KFARSLKEHIQAHMPEIVAHQTT*EWPCFT
Trigger: GGTAAAGCATGGCCACTCCAAGGTGGTCTGGTGCGC...GACTATTTCAGGCATGTGGGCCTGGATATGCTCCTTGAGACTTCTGGCAAACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CAA 90 bp GAGCTCTTGTCTGGGATAGATCTAATCACAAGCATGAAGTCATCCCTGCAGCCAACCAGAGCGTTCTCCTaGGAAGACAGCTGGGCAGGC +
Preference number: 5 (lower is better)
Translates to: ELLSGIDLITSMKSSLQPTRAFS*EDSWAG
Trigger: GCCTGCCCAGCTGTCTTCCAAGGAGAACGCTCTGGT...TGGCTGCAGGGATGACTTCATGCTTGTGATTAGATCTATCCCAGACAAGAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561057.1
ENST00000561370.5
CDS-3UTR CAA 90 bp AGCACTGATGCCCTCAGTAACAGTGGATCATCCCTGTCTATGTCTAGAATCAGGCAGGGAGGGGTCAGATaGGACCTACCTCCTGCCCTT +
Preference number: 5 (lower is better)
Translates to: STDALSNSGSSLSMSRIRQGGVR*DLPPAL
Trigger: AAGGGCAGGAGGTAGGTCCAATCTGACCCCTCCCTG...CCTGATTCTAGACATAGACAGGGATGATCCACTGTTACTGAGGGCATCAGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CAA 90 bp CCAGAGGCACTAGTGGTGTTGGGGAATCGGGTAGGAGAAATATTCACAGCAACGCGTCTCCCCTTTGACTaGACTGCGAAAGTACAGCCC +
Preference number: 5 (lower is better)
Translates to: PEALVVLGNRVGEIFTATRLPFD*TAKVQP
Trigger: GGGCTGTACTTTCGCAGTCAAGTCAAAGGGGAGACG...CGTTGCTGTGAATATTTCTCCTACCCGATTCCCCAACACCACTAGTGCCTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561370.5
CDS TCA 90 bp TGGTTTGAGAGGCAAGGAGCAGCCGTTCTCGGTCCGTCTCCCCTTTaGCTTGACTGCGAAAGTACAGCCTGTTCTTGTACATCAGCTTCA +
Preference number: 5 (lower is better)
Translates to: WFERQGAAVLGPSPL*LDCESTACSCTSAS
Trigger: TGAAGCTGATGTACAAGAACAGGCTGTACTTTCGCAGTCAAGTCAAAGGGGAGACGGACCGAGAACGGCTGCTCCTTGCCTCTCAAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329153.10
ENST00000557971.5
ENST00000558366.5
ENST00000558386.5
ENST00000560100.1
CDS GCA 90 bp GGCAGCCATCTCAAGAGCCAATTCCTTGTTGATAGGAAACCTCCCTaGCACTATCTCTCTACTGGTTTGAGAGGCAAGGAGCAGCCGTTC +
Preference number: 5 (lower is better)
Translates to: GSHLKSQFLVDRKPP*HYLSTGLRGKEQPF
Trigger: GAACGGCTGCTCCTTGCCTCTCAAACCAGTAGAGAGATAGTGGCAGGGAGGTTTCCTATCAACAAGGAATTGGCTCTTGAGATGGCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329153.10
ENST00000557971.5
ENST00000558366.5
ENST00000558386.5
ENST00000559981.1
ENST00000561370.5
CDS CCA 90 bp TTCTTCAGATTGGATAGTTTTACCTTCTCTTCCATGACACCCACCTaGGTCTCAGCGTTCTCTGCTCTCTGCTCTGCCTCCAGCAGCCTC +
Preference number: 5 (lower is better)
Translates to: FFRLDSFTFSSMTPT*VSAFSALCSASSSL
Trigger: GAGGCTGCTGGAGGCAGAGCAGAGAGCAGAGAACGCTGAGACCCAGGTGGGTGTCATGGAAGAGAAGGTAAAACTATCCAATCTGAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CAA 90 bp AGCACTGATGCCCTCAGTAACAGTGGATCATCCCTGTCTATGTCTAGAATCAGGTGGCTGTGGTGCCTTTaGGCCAACTGGATGCTGTCC +
Preference number: 5 (lower is better)
Translates to: STDALSNSGSSLSMSRIRWLWCL*ANWMLS
Trigger: GGACAGCATCCAGTTGGCCAAAAGGCACCACAGCCA...CCTGATTCTAGACATAGACAGGGATGATCCACTGTTACTGAGGGCATCAGTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CAA 90 bp TGTACCCTCACCCTCAAACTAATTCCCAGCAGAAGTTTGCCAGAAGTCTCAAGGAAGAGCTGGCAGGACTaGAAGAGCTTGAGGGCCTCC +
Preference number: 5 (lower is better)
Translates to: CTLTLKLIPSRSLPEVSRKSWQD*KSLRAS
Trigger: GGAGGCCCTCAAGCTCTTCAAGTCCTGCCAGCTCTT...CCTTGAGACTTCTGGCAAACTTCTGCTGGGAATTAGTTTGAGGGTGAGGGTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CAA 90 bp GCTGAGGCAGGAGAATTGCTTGAACCCTGTGGACTGGGTGACATAGTGACACTGGGTCTGCTTCATGAGTaGGCAGTAGATCTCACTCTG +
Preference number: 5 (lower is better)
Translates to: AEAGELLEPCGLGDIVTLGLLHE*AVDLTL
Trigger: CAGAGTGAGATCTACTGCCAACTCATGAAGCAGACC...CAGTGTCACTATGTCACCCAGTCCACAGGGTTCAAGCAATTCTCCTGCCTCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CAA 90 bp GCTGAGGCAGGAGAATTGCTTGAACCCTGTGGACTGGGTGACATAGTGACACTGAGGAGGGGAGCATCCTaGCAATGTTGCCCATTTTGT +
Preference number: 5 (lower is better)
Translates to: AEAGELLEPCGLGDIVTLRRGAS*QCCPFC
Trigger: ACAAAATGGGCAACATTGCAAGGATGCTCCCCTCCT...CAGTGTCACTATGTCACCCAGTCCACAGGGTTCAAGCAATTCTCCTGCCTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CAA 90 bp CATGTTATCCTGCAAAGACTGCCCCAGAAGGGGCTGTACCAATGCCTACATACCAATCCTCCAAGGGGCTaGCTGCTTCAGAAACAGAGT +
Preference number: 5 (lower is better)
Translates to: HVILQRLPQKGLYQCLHTNPPRG*LLQKQS
Trigger: ACTCTGTTTCTGAAGCAGCAAGCCCCTTGGAGGATT...GGTATGTAGGCATTGGTACAGCCCCTTCTGGGGCAGTCTTTGCAGGATAACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CAA 90 bp AGGAGAAGCTTACAGCAGCTGAGGTGTTCAGATAAACTAGTTCTGGCCTCGCAGGGAGTTCAGATCCACTaGGCCTTGAGGTTTCCGGAT +
Preference number: 5 (lower is better)
Translates to: RRSLQQLRCSDKLVLASQGVQIH*ALRFPD
Trigger: ATCCGGAAACCTCAAGGCCAAGTGGATCTGAACTCC...CTGCGAGGCCAGAACTAGTTTATCTGAACACCTCAGCTGCTGTAAGCTTCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CAA 90 bp GGGTTAAAGGCTTGGTTTTGGGTGCTACTGCTAAATATACAGTTTTCAGCACTTCCCTTCACGGTGGGCTaGGTGCCACCCCGAAGCAGA +
Preference number: 5 (lower is better)
Translates to: GLKAWFWVLLLNIQFSALPFTVG*VPPRSR
Trigger: TCTGCTTCGGGGTGGCACCAAGCCCACCGTGAAGGG...AAGTGCTGAAAACTGTATATTTAGCAGTAGCACCCAAAACCAAGCCTTTAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CAA 90 bp ACCTGTGGTACATGTGACTTGTTCGAGGTAGAAATGTCTCAGCTAGATCCCCAATGGCCATGCTTTACCTaGGTCAGCCAGCCCTTCACG +
Preference number: 5 (lower is better)
Translates to: TCGTCDLFEVEMSQLDPQWPCFT*VSQPFT
Trigger: CGTGAAGGGCTGGCTGACCAAGGTAAAGCATGGCCA...TTGGGGATCTAGCTGAGACATTTCTACCTCGAACAAGTCACATGTACCACAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CAA 90 bp TATGTCTGTCACCAGCCCTGCAGGAATTATTCAGGAACCTGTGGTACATGTGACGGGATCTGCATGGCGTaGGAGCTGCTGCTTGACATA +
Preference number: 5 (lower is better)
Translates to: YVCHQPCRNYSGTCGTCDGICMA*ELLLDI
Trigger: TATGTCAAGCAGCAGCTCCAACGCCATGCAGATCCC...GTCACATGTACCACAGGTTCCTGAATAATTCCTGCAGGGCTGGTGACAGACATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CAA 90 bp CCAGAGCTCTTGTCTGGGATAGATCTAATCACAAGCATGAAGTCATCCCTGCAGGGGATCTGCATGGCGTaGGAGCTGCTGCTTGACATA +
Preference number: 5 (lower is better)
Translates to: PELLSGIDLITSMKSSLQGICMA*ELLLDI
Trigger: TATGTCAAGCAGCAGCTCCAACGCCATGCAGATCCC...CTGCAGGGATGACTTCATGCTTGTGATTAGATCTATCCCAGACAAGAGCTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561370.5
CDS-3UTR CAA 90 bp AGGAGAAGCTTACAGCAGCTGAGGTGTTCAGATAAACTAGTTCTGGCCTCGCAGAGCAACGTTGGCCCCTaGGTAGCACAGGAAACAGAA +
Preference number: 5 (lower is better)
Translates to: RRSLQQLRCSDKLVLASQSNVGP*VAQETE
Trigger: TTCTGTTTCCTGTGCTACCAAGGGGCCAACGTTGCT...CTGCGAGGCCAGAACTAGTTTATCTGAACACCTCAGCTGCTGTAAGCTTCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329153.10
ENST00000559168.1
CDS-3UTR CAA 90 bp AGCATCCTTGCAATGTTGCCCATTTTGTGGTCAACATATCTGCCAGGTGCCTCAGAGGCACTAGTGGTGTaGGGGAATCGGGTAGGAGAA +
Preference number: 5 (lower is better)
Translates to: SILAMLPILWSTYLPGASEALVV*GNRVGE
Trigger: TTCTCCTACCCGATTCCCCAACACCACTAGTGCCTC...TGAGGCACCTGGCAGATATGTTGACCACAAAATGGGCAACATTGCAAGGATGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561370.5
CDS-3UTR CAA 90 bp TGTACCCTCACCCTCAAACTAATTCCCAGCAGAAGTTTGCCAGAAGTCTCAAGGGCTGAGGCAGGAGAATaGCTTGAACCCTGTGGACTG +
Preference number: 5 (lower is better)
Translates to: CTLTLKLIPSRSLPEVSRAEAGE*LEPCGL
Trigger: CAGTCCACAGGGTTCAAGCAATTCTCCTGCCTCAGC...CCTTGAGACTTCTGGCAAACTTCTGCTGGGAATTAGTTTGAGGGTGAGGGTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CAA 90 bp AGCACTGATGCCCTCAGTAACAGTGGATCATCCCTGTCTATGTCTAGAATCAGGACCTACCTCCTGCCCTaGCTTGCACATTGCGTGGTA +
Preference number: 5 (lower is better)
Translates to: STDALSNSGSSLSMSRIRTYLLP*LAHCVV
Trigger: TACCACGCAATGTGCAAGCAAGGGCAGGAGGTAGGT...CCTGATTCTAGACATAGACAGGGATGATCCACTGTTACTGAGGGCATCAGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CAA 90 bp TCTCTAAATCCAGAGGCACTAGTGGTGTTGGGGAATCGGGTAGGAGAAATATTCGGAATCTGCCCTGCCTaGAGGACTGCTGCAAGGAAG +
Preference number: 5 (lower is better)
Translates to: SLNPEALVVLGNRVGEIFGICPA*RTAARK
Trigger: CTTCCTTGCAGCAGTCCTCAAGGCAGGGCAGATTCC...GAATATTTCTCCTACCCGATTCCCCAACACCACTAGTGCCTCTGGATTTAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561370.5
CDS TCA 90 bp CAGAGTCCACATTCTTCAGATTGGATAGTTTTACCTTCTCTTCCATaGCACCCACCTGGGTCTCAGCGTTCTCTGCTCTCTGCTCTGCCT +
Preference number: 5 (lower is better)
Translates to: QSPHSSDWIVLPSLP*HPPGSQRSLLSALP
Trigger: AGGCAGAGCAGAGAGCAGAGAACGCTGAGACCCAGGTGGGTGTCATGGAAGAGAAGGTAAAACTATCCAATCTGAAGAATGTGGACTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS TCA 90 bp GGCAAAGGGCCAGTGCATGAGGGATGTGAGCTTATCCACTGTAAATaGACTGGGCATACCTGGGTCCCTCCTTTACCAACAATCTTTTGG +
Preference number: 5 (lower is better)
Translates to: GKGPVHEGCELIHCK*TGHTWVPPLPTIFW
Trigger: CCAAAAGATTGTTGGTAAAGGAGGGACCCAGGTATGCCCAGTTCATTTACAGTGGATAAGCTCACATCCCTCATGCACTGGCCCTTTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560100.1
CDS-3UTR CAA 90 bp ATATCTCTAAATCCAGAGGCACTAGTGGTGTTGGGGAATCGGGTAGGAGAAATATCCAGCTCCTGCATCTaGTCAGCCAGCAGCTCCCTT +
Preference number: 5 (lower is better)
Translates to: ISLNPEALVVLGNRVGEISSSCI*SASSSL
Trigger: AAGGGAGCTGCTGGCTGACAAGATGCAGGAGCTGGA...TATTTCTCCTACCCGATTCCCCAACACCACTAGTGCCTCTGGATTTAGAGATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CAA 90 bp TCAGGAACCTGTGGTACATGTGACTTGTTCGAGGTAGAAATGTCTCAGCTAGATCAAGGGCAGGAGGGCTaGAAGCGCAGCATGCAGTAT +
Preference number: 5 (lower is better)
Translates to: SGTCGTCDLFEVEMSQLDQGQEG*KRSMQY
Trigger: ATACTGCATGCTGCGCTTCAAGCCCTCCTGCCCTTG...ATCTAGCTGAGACATTTCTACCTCGAACAAGTCACATGTACCACAGGTTCCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CAA 90 bp TCAGGAACCTGTGGTACATGTGACTTGTTCGAGGTAGAAATGTCTCAGCTAGATCAGGACTTGAAGAGCTaGAGGGCCTCCGTCTGCAAG +
Preference number: 5 (lower is better)
Translates to: SGTCGTCDLFEVEMSQLDQDLKS*RASVCK
Trigger: CTTGCAGACGGAGGCCCTCAAGCTCTTCAAGTCCTG...ATCTAGCTGAGACATTTCTACCTCGAACAAGTCACATGTACCACAGGTTCCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CAA 90 bp CCAGAGCTCTTGTCTGGGATAGATCTAATCACAAGCATGAAGTCATCCCTGCAGCGTTGTCACATAGTGTaGTGGTCCAGGATGCTGACG +
Preference number: 5 (lower is better)
Translates to: PELLSGIDLITSMKSSLQRCHIV*WSRMLT
Trigger: CGTCAGCATCCTGGACCACAACACTATGTGACAACG...CTGCAGGGATGACTTCATGCTTGTGATTAGATCTATCCCAGACAAGAGCTCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561057.1
CDS-3UTR CAA 90 bp GAATCGGGTAGGAGAAATATTCACAGCAACGTTGGCCCCTTGGTAGCACAGGAATGCAGCCACCAAACGTaGTCACATAGTGTTGTGGTC +
Preference number: 5 (lower is better)
Translates to: ESGRRNIHSNVGPLVAQECSHQT*SHSVVV
Trigger: GACCACAACACTATGTGACAACGTTTGGTGGCTGCA...TTCCTGTGCTACCAAGGGGCCAACGTTGCTGTGAATATTTCTCCTACCCGATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561057.1
CDS TCA 90 bp TGGTTTGAGAGGCAAGGAGCAGCCGTTCTCGGTCCGTCTCCCCTTTaGCTTGACTGCGAAAGTACAGCCTACAAAGAAGAGAATAAGAAA +
Preference number: 5 (lower is better)
Translates to: WFERQGAAVLGPSPL*LDCESTAYKEENKK
Trigger: TTTCTTATTCTCTTCTTTGTAGGCTGTACTTTCGCAGTCAAGTCAAAGGGGAGACGGACCGAGAACGGCTGCTCCTTGCCTCTCAAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559981.1
CDS CCA 90 bp TGGCTGATGAGCTCATCTTTGCCCTTTATGGCTTTCAGCAATTCTTaGTATTTCCGGTGCAGGCTCCCCTCAGAGTCCACATTCTTCAGA +
Preference number: 5 (lower is better)
Translates to: WLMSSSLPFMAFSNS*YFRCRLPSESTFFR
Trigger: TCTGAAGAATGTGGACTCTGAGGGGAGCCTGCACCGGAAATACCAAGAATTGCTGAAAGCCATAAAGGGCAAAGATGAGCTCATCAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS CCA 90 bp TCATTCACAGCAATCCACACCAGAGCGTTCTCCTTGGAAGACAGCTaGGCAGGCTGGGGAAACAGAAACAACCCATCAGATATATCCATA +
Preference number: 5 (lower is better)
Translates to: SFTAIHTRAFSLEDS*AGWGNRNNPSDISI
Trigger: TATGGATATATCTGATGGGTTGTTTCTGTTTCCCCAGCCTGCCCAGCTGTCTTCCAAGGAGAACGCTCTGGTGTGGATTGCTGTGAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559766.1
CDS CCA 90 bp GTGCCCTTCTTGGGAGCAGCCATCCGGAAGATCAACTTCTCAATGTaGCTTTTTCCAGAGCTCTTGTCTGGGATAGATCTAATCACAAGC +
Preference number: 5 (lower is better)
Translates to: VPFLGAAIRKINFSM*LFPELLSGIDLITS
Trigger: GCTTGTGATTAGATCTATCCCAGACAAGAGCTCTGGAAAAAGCCACATTGAGAAGTTGATCTTCCGGATGGCTGCTCCCAAGAAGGGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559832.1
CDS-3UTR CAA 90 bp GTTAATAAACAGATCTTCCAAAACACACAGTTACCTGGTTCACAGATAGCTGCTCCCTGGCAGAGGTCTTaGTCCCAGGGAGCATCCCTC +
Preference number: 5 (lower is better)
Translates to: VNKQIFQNTQLPGSQIAAPWQRS*SQGASL
Trigger: GAGGGATGCTCCCTGGGACAAAGACCTCTGCCAGGG...AGCAGCTATCTGTGAACCAGGTAACTGTGTGTTTTGGAAGATCTGTTTATTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CAA 90 bp CTTCCAAAACACACAGTTACCTGGTTCACAGATAGCTGCTTTTTATTGACAAACCAGGAGCCCGCACCTTaGGTAGGGTCAGACTGCTGC +
Preference number: 5 (lower is better)
Translates to: LPKHTVTWFTDSCFLLTNQEPAP*VGSDCC
Trigger: GCAGCAGTCTGACCCTACCAAAGGTGCGGGCTCCTG...GTTTGTCAATAAAAAGCAGCTATCTGTGAACCAGGTAACTGTGTGTTTTGGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CAA 90 bp ATAAAACCAGAGCTGTTATGTCTGTCACCAGCCCTGCAGGAATTATTCAGGAACCTCCCCTCGAACAATTaGGCAGCGGGAGTTCAGATC +
Preference number: 5 (lower is better)
Translates to: IKPELLCLSPALQELFRNLPSNN*AAGVQI
Trigger: GATCTGAACTCCCGCTGCCAAATTGTTCGAGGGGAG...GTTCCTGAATAATTCCTGCAGGGCTGGTGACAGACATAACAGCTCTGGTTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CAA 90 bp ACCTGTGGTACATGTGACTTGTTCGAGGTAGAAATGTCTCAGCTAGATCCCCAATATCTCTCTACTGGTTaGAGAGGCAAGGAGCAGCCG +
Preference number: 5 (lower is better)
Translates to: TCGTCDLFEVEMSQLDPQYLSTG*RGKEQP
Trigger: CGGCTGCTCCTTGCCTCTCAAACCAGTAGAGAGATA...TTGGGGATCTAGCTGAGACATTTCTACCTCGAACAAGTCACATGTACCACAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CAA 90 bp AGCCATCCGGAAGATCAACTTCTCAATGTGGCTTTTTCCAGAGCTCTTGTCTGGAGGAGGGGAGCATCCTaGCAATGTTGCCCATTTTGT +
Preference number: 5 (lower is better)
Translates to: SHPEDQLLNVAFSRALVWRRGAS*QCCPFC
Trigger: ACAAAATGGGCAACATTGCAAGGATGCTCCCCTCCT...CCAGACAAGAGCTCTGGAAAAAGCCACATTGAGAAGTTGATCTTCCGGATGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000561370.5
CDS-3UTR CAA 90 bp ACCTGTGGTACATGTGACTTGTTCGAGGTAGAAATGTCTCAGCTAGATCCCCAATGCAGCCACCAAACGTaGTCACTGAAGAGTAGGGGT +
Preference number: 5 (lower is better)
Translates to: TCGTCDLFEVEMSQLDPQCSHQT*SLKSRG
Trigger: ACCCCTACTCTTCAGTGACAACGTTTGGTGGCTGCA...TTGGGGATCTAGCTGAGACATTTCTACCTCGAACAAGTCACATGTACCACAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CAA 90 bp ATATCTCTAAATCCAGAGGCACTAGTGGTGTTGGGGAATCGGGTAGGAGAAATAGTAGCTTCTGCAATCTaGGGAGCAGCCATCCGGAAG +
Preference number: 5 (lower is better)
Translates to: ISLNPEALVVLGNRVGEIVASAI*GAAIRK
Trigger: CTTCCGGATGGCTGCTCCCAAGATTGCAGAAGCTAC...TATTTCTCCTACCCGATTCCCCAACACCACTAGTGCCTCTGGATTTAGAGATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329153.10
ENST00000559168.1
ENST00000561057.1
CDS-3UTR CAA 90 bp TATATATCTCTAAATCCAGAGGCACTAGTGGTGTTGGGGAATCGGGTAGGAGAAGTAGCTTCTGCAATCTaGGGAGCAGCCATCCGGAAG +
Preference number: 5 (lower is better)
Translates to: YISLNPEALVVLGNRVGEVASAI*GAAIRK
Trigger: CTTCCGGATGGCTGCTCCCAAGATTGCAGAAGCTAC...TTCTCCTACCCGATTCCCCAACACCACTAGTGCCTCTGGATTTAGAGATATATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329153.10
ENST00000559168.1
ENST00000561057.1
CDS-3UTR CAA 90 bp ATATCTCTAAATCCAGAGGCACTAGTGGTGTTGGGGAATCGGGTAGGAGAAATAGAGGCACTAGTGGTGTaGGGGAATCGGGTAGGAGAA +
Preference number: 5 (lower is better)
Translates to: ISLNPEALVVLGNRVGEIEALVV*GNRVGE
Trigger: TTCTCCTACCCGATTCCCCAACACCACTAGTGCCTC...TATTTCTCCTACCCGATTCCCCAACACCACTAGTGCCTCTGGATTTAGAGATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329153.10
ENST00000559168.1
ENST00000561057.1
ENST00000561370.5
CDS-3UTR CAA 90 bp AATGTTATCCTTATTGGCCTTAGAGATACCCAAGATATTATAAAACCAGAGCTGATGGAGACGCCTCTCTaGATGGCCCGGGGGCTGCCT +
Preference number: 5 (lower is better)
Translates to: NVILIGLRDTQDIIKPELMETPL*MARGLP
Trigger: AGGCAGCCCCCGGGCCATCAAGAGAGGCGTCTCCAT...CAGCTCTGGTTTTATAATATCTTGGGTATCTCTAAGGCCAATAAGGATAACATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CAA 90 bp TTGGGAGCAGCCATCCGGAAGATCAACTTCTCAATGTGGCTTTTTCCAGAGCTCAGCATCCTTGCAATGTaGCCCATTTTGTGGTCAACA +
Preference number: 5 (lower is better)
Translates to: LGAAIRKINFSMWLFPELSILAM*PILWST
Trigger: TGTTGACCACAAAATGGGCAACATTGCAAGGATGCT...GAGCTCTGGAAAAAGCCACATTGAGAAGTTGATCTTCCGGATGGCTGCTCCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561370.5
CDS-3UTR CAA 90 bp ATAAAACCAGAGCTGTTATGTCTGTCACCAGCCCTGCAGGAATTATTCAGGAACAGCAACGTTGGCCCCTaGGTAGCACAGGAAACAGAA +
Preference number: 5 (lower is better)
Translates to: IKPELLCLSPALQELFRNSNVGP*VAQETE
Trigger: TTCTGTTTCCTGTGCTACCAAGGGGCCAACGTTGCT...GTTCCTGAATAATTCCTGCAGGGCTGGTGACAGACATAACAGCTCTGGTTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329153.10
ENST00000559168.1
CDS-3UTR CAA 90 bp ATATCTCTAAATCCAGAGGCACTAGTGGTGTTGGGGAATCGGGTAGGAGAAATAAGCAACGTTGGCCCCTaGGTAGCACAGGAAACAGAA +
Preference number: 5 (lower is better)
Translates to: ISLNPEALVVLGNRVGEISNVGP*VAQETE
Trigger: TTCTGTTTCCTGTGCTACCAAGGGGCCAACGTTGCT...TATTTCTCCTACCCGATTCCCCAACACCACTAGTGCCTCTGGATTTAGAGATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329153.10
ENST00000559168.1
ENST00000561057.1
ENST00000561370.5
CDS-3UTR CAA 90 bp CCAGAGCTGTTATGTCTGTCACCAGCCCTGCAGGAATTATTCAGGAACCTGTGGAACACAGCTCCATTCTaGTTTACTCTTCCTTTGGAC +
Preference number: 5 (lower is better)
Translates to: PELLCLSPALQELFRNLWNTAPF*FTLPLD
Trigger: GTCCAAAGGAAGAGTAAACAAGAATGGAGCTGTGTT...CCACAGGTTCCTGAATAATTCCTGCAGGGCTGGTGACAGACATAACAGCTCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329153.10
ENST00000559168.1
CDS-3UTR CAA 90 bp CTTATTGGCCTTAGAGATACCCAAGATATTATAAAACCAGAGCTGTTATGTCTGGGGGGTGTAGGTGGCTaGTTACCCAGCTCCACTTCC +
Preference number: 5 (lower is better)
Translates to: LIGLRDTQDIIKPELLCLGGVGG*LPSSTS
Trigger: GGAAGTGGAGCTGGGTAACAAGCCACCTACACCCCC...CAGACATAACAGCTCTGGTTTTATAATATCTTGGGTATCTCTAAGGCCAATAAG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CAA 90 bp CTTATTGGCCTTAGAGATACCCAAGATATTATAAAACCAGAGCTGTTATGTCTGACCAGAGCGTTCTCCTaGGAAGACAGCTGGGCAGGC +
Preference number: 5 (lower is better)
Translates to: LIGLRDTQDIIKPELLCLTRAFS*EDSWAG
Trigger: GCCTGCCCAGCTGTCTTCCAAGGAGAACGCTCTGGT...CAGACATAACAGCTCTGGTTTTATAATATCTTGGGTATCTCTAAGGCCAATAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CAA 90 bp AGGAGAAGCTTACAGCAGCTGAGGTGTTCAGATAAACTAGTTCTGGCCTCGCAGCTTTTTCCAGAGCTCTaGTCTGGGATAGATCTAATC +
Preference number: 5 (lower is better)
Translates to: RRSLQQLRCSDKLVLASQLFPEL*SGIDLI
Trigger: GATTAGATCTATCCCAGACAAGAGCTCTGGAAAAAG...CTGCGAGGCCAGAACTAGTTTATCTGAACACCTCAGCTGCTGTAAGCTTCTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329153.10
ENST00000559168.1
CDS-3UTR CAA 90 bp TATTATAAAACCAGAGCTGTTATGTCTGTCACCAGCCCTGCAGGAATTATTCAGGTAGCTTCTGCAATCTaGGGAGCAGCCATCCGGAAG +
Preference number: 5 (lower is better)
Translates to: YYKTRAVMSVTSPAGIIQVASAI*GAAIRK
Trigger: CTTCCGGATGGCTGCTCCCAAGATTGCAGAAGCTAC...CTGAATAATTCCTGCAGGGCTGGTGACAGACATAACAGCTCTGGTTTTATAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329153.10
ENST00000559168.1
CDS-3UTR CAA 90 bp CTTAGAGATACCCAAGATATTATAAAACCAGAGCTGTTATGTCTGTCACCAGCCAGGCAGGAGAATTGCTaGAACCCTGTGGACTGGGTG +
Preference number: 5 (lower is better)
Translates to: LRDTQDIIKPELLCLSPARQENC*NPVDWV
Trigger: CACCCAGTCCACAGGGTTCAAGCAATTCTCCTGCCT...GGCTGGTGACAGACATAACAGCTCTGGTTTTATAATATCTTGGGTATCTCTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CAA 90 bp ATCAGAAGGTCTGAATTGAGGGGGATTATGGTATTATCAGTAAGGCAAAAGATGGCCCTTGCTTGCACATaGCGTGGTACTGGGTTTGGC +
Preference number: 5 (lower is better)
Translates to: IRRSELRGIMVLSVRQKMALACT*RGTGFG
Trigger: GCCAAACCCAGTACCACGCAATGTGCAAGCAAGGGC...CATCTTTTGCCTTACTGATAATACCATAATCCCCCTCAATTCAGACCTTCTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CAA 90 bp AGGAGAAGCTTACAGCAGCTGAGGTGTTCAGATAAACTAGTTCTGGCCTCGCAGGTTTCTGACTCATTTTaGGTGGTCTTACAGCAGCAA +
Preference number: 5 (lower is better)
Translates to: RRSLQQLRCSDKLVLASQVSDSF*VVLQQQ
Trigger: TTGCTGCTGTAAGACCACCAAAAATGAGTCAGAAAC...CTGCGAGGCCAGAACTAGTTTATCTGAACACCTCAGCTGCTGTAAGCTTCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CAA 90 bp TATATATCTCTAAATCCAGAGGCACTAGTGGTGTTGGGGAATCGGGTAGGAGAAGTTGGGGTTAAAGGCTaGGTTTTGGGTGCTACTGCT +
Preference number: 5 (lower is better)
Translates to: YISLNPEALVVLGNRVGEVGVKG*VLGATA
Trigger: AGCAGTAGCACCCAAAACCAAGCCTTTAACCCCAAC...TTCTCCTACCCGATTCCCCAACACCACTAGTGCCTCTGGATTTAGAGATATATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CAA 90 bp AGGAGAAGCTTACAGCAGCTGAGGTGTTCAGATAAACTAGTTCTGGCCTCGCAGCAAAAGATACACACATaGTTGGGGTTAAAGGCTTGG +
Preference number: 5 (lower is better)
Translates to: RRSLQQLRCSDKLVLASQQKIHT*LGLKAW
Trigger: CCAAGCCTTTAACCCCAACAATGTGTGTATCTTTTG...CTGCGAGGCCAGAACTAGTTTATCTGAACACCTCAGCTGCTGTAAGCTTCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CAA 90 bp GCTGAGGCAGGAGAATTGCTTGAACCCTGTGGACTGGGTGACATAGTGACACTGATAATGTTATCCTTATaGGCCTTAGAGATACCCAAG +
Preference number: 5 (lower is better)
Translates to: AEAGELLEPCGLGDIVTLIMLSL*ALEIPK
Trigger: CTTGGGTATCTCTAAGGCCAATAAGGATAACATTAT...CAGTGTCACTATGTCACCCAGTCCACAGGGTTCAAGCAATTCTCCTGCCTCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CAA 90 bp TATTATAAAACCAGAGCTGTTATGTCTGTCACCAGCCCTGCAGGAATTATTCAGATGGCATCACAGATCTaGACACTTCCCTGCAGGCAG +
Preference number: 5 (lower is better)
Translates to: YYKTRAVMSVTSPAGIIQMASQI*TLPCRQ
Trigger: CTGCCTGCAGGGAAGTGTCAAGATCTGTGATGCCAT...CTGAATAATTCCTGCAGGGCTGGTGACAGACATAACAGCTCTGGTTTTATAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CAA 90 bp CCAAGATATTATAAAACCAGAGCTGTTATGTCTGTCACCAGCCCTGCAGGAATTATGGCTTGTTCCCACTaGGAGATGGCATCACAGATC +
Preference number: 5 (lower is better)
Translates to: PRYYKTRAVMSVTSPAGIMACSH*EMASQI
Trigger: GATCTGTGATGCCATCTCCAAGTGGGAACAAGCCAT...AATTCCTGCAGGGCTGGTGACAGACATAACAGCTCTGGTTTTATAATATCTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CAA 90 bp TCTGGGATAGATCTAATCACAAGCATGAAGTCATCCCTGCAGCCACCAAACGTTGCAATGTTGCCCATTTaGTGGTCAACATATCTGCCA +
Preference number: 5 (lower is better)
Translates to: SGIDLITSMKSSLQPPNVAMLPI*WSTYLP
Trigger: TGGCAGATATGTTGACCACAAAATGGGCAACATTGC...AACGTTTGGTGGCTGCAGGGATGACTTCATGCTTGTGATTAGATCTATCCCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561370.5
CDS-3UTR CAA 90 bp ACCTGTGGTACATGTGACTTGTTCGAGGTAGAAATGTCTCAGCTAGATCCCCAAAGCATCCTTGCAATGTaGCCCATTTTGTGGTCAACA +
Preference number: 5 (lower is better)
Translates to: TCGTCDLFEVEMSQLDPQSILAM*PILWST
Trigger: TGTTGACCACAAAATGGGCAACATTGCAAGGATGCT...TTGGGGATCTAGCTGAGACATTTCTACCTCGAACAAGTCACATGTACCACAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CAA 90 bp GGGTTAAAGGCTTGGTTTTGGGTGCTACTGCTAAATATACAGTTTTCAGCACTTTGCACTTGCATAGTGTaGTGGTCCAGGATGCTGACG +
Preference number: 5 (lower is better)
Translates to: GLKAWFWVLLLNIQFSALCTCIV*WSRMLT
Trigger: CGTCAGCATCCTGGACCACAACACTATGCAAGTGCA...AAGTGCTGAAAACTGTATATTTAGCAGTAGCACCCAAAACCAAGCCTTTAACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CAA 90 bp GAGCAGCCATCCGGAAGATCAACTTCTCAATGTGGCTTTTTCCAGAGCTCTTGTCTTTTTCCAGAGCTCTaGTCTGGGATAGATCTAATC +
Preference number: 5 (lower is better)
Translates to: EQPSGRSTSQCGFFQSSCLFPEL*SGIDLI
Trigger: GATTAGATCTATCCCAGACAAGAGCTCTGGAAAAAG...ACAAGAGCTCTGGAAAAAGCCACATTGAGAAGTTGATCTTCCGGATGGCTGCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000561057.1
ENST00000561370.5
CDS-3UTR CAA 90 bp ATCAGAAGGTCTGAATTGAGGGGGATTATGGTATTATCAGTAAGGCAAAAGATGGAGGCACTAGTGGTGTaGGGGAATCGGGTAGGAGAA +
Preference number: 5 (lower is better)
Translates to: IRRSELRGIMVLSVRQKMEALVV*GNRVGE
Trigger: TTCTCCTACCCGATTCCCCAACACCACTAGTGCCTC...CATCTTTTGCCTTACTGATAATACCATAATCCCCCTCAATTCAGACCTTCTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CAA 90 bp CTTATTGGCCTTAGAGATACCCAAGATATTATAAAACCAGAGCTGTTATGTCTGACCTCCTGCCCTTGCTaGCACATTGCGTGGTACTGG +
Preference number: 5 (lower is better)
Translates to: LIGLRDTQDIIKPELLCLTSCPC*HIAWYW
Trigger: CCAGTACCACGCAATGTGCAAGCAAGGGCAGGAGGT...CAGACATAACAGCTCTGGTTTTATAATATCTTGGGTATCTCTAAGGCCAATAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CAA 90 bp AAACCAGAGCTGTTATGTCTGTCACCAGCCCTGCAGGAATTATTCAGGAACCTGGCAGAGTGCATTTGCTaGGTCTTTTACAAGAAGAAG +
Preference number: 5 (lower is better)
Translates to: KPELLCLSPALQELFRNLAECIC*VFYKKK
Trigger: CTTCTTCTTGTAAAAGACCAAGCAAATGCACTCTGC...CAGGTTCCTGAATAATTCCTGCAGGGCTGGTGACAGACATAACAGCTCTGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CAA 90 bp TATGTCTGTCACCAGCCCTGCAGGAATTATTCAGGAACCTGTGGTACATGTGACTGTGGTACATGTGACTaGTTCGAGGTAGAAATGTCT +
Preference number: 5 (lower is better)
Translates to: YVCHQPCRNYSGTCGTCDCGTCD*FEVEMS
Trigger: AGACATTTCTACCTCGAACAAGTCACATGTACCACA...GTCACATGTACCACAGGTTCCTGAATAATTCCTGCAGGGCTGGTGACAGACATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329153.10
ENST00000559168.1
CDS-3UTR CAA 90 bp AAGTTTGCCAGAAGTCTCAAGGAGCATATCCAGGCCCACATGCCTGAAATAGTCGACAGAAATTGGACTTaGGTTTTCAGACATGGGACT +
Preference number: 5 (lower is better)
Translates to: KFARSLKEHIQAHMPEIVDRNWT*VFRHGT
Trigger: AGTCCCATGTCTGAAAACCAAAGTCCAATTTCTGTC...GACTATTTCAGGCATGTGGGCCTGGATATGCTCCTTGAGACTTCTGGCAAACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS GCA 90 bp TCATCTTTGCCCTTTATGGCTTTCAGCAATTCTTGGTATTTCCGGTaGAGGCTCCCCTCAGAGTCCACATTCTTCAGATTGGATAGTTTT +
Preference number: 5 (lower is better)
Translates to: SSLPFMAFSNSWYFR*RLPSESTFFRLDSF
Trigger: AAAACTATCCAATCTGAAGAATGTGGACTCTGAGGGGAGCCTGCACCGGAAATACCAAGAATTGCTGAAAGCCATAAAGGGCAAAGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS GCA 90 bp CATCTCAAGCTTTGCCAACTTGAGTGTCACCCATTCCTTGATCTTTaGAGCTTTTTCTTGAACAGTTTTTGCTTCCTCTGCCCTCATCTG +
Preference number: 5 (lower is better)
Translates to: HLKLCQLECHPFLDL*SFFLNSFCFLCPHL
Trigger: CAGATGAGGGCAGAGGAAGCAAAAACTGTTCAAGAAAAAGCTGCAAAGATCAAGGAATGGGTGACACTCAAGTTGGCAAAGCTTGAGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CAA 90 bp GATATTATAAAACCAGAGCTGTTATGTCTGTCACCAGCCCTGCAGGAATTATTCGGCTTTCAGCAATTCTaGGTATTTCCGGTGCAGGCT +
Preference number: 5 (lower is better)
Translates to: DIIKPELLCLSPALQELFGFQQF*VFPVQA
Trigger: AGCCTGCACCGGAAATACCAAGAATTGCTGAAAGCC...GAATAATTCCTGCAGGGCTGGTGACAGACATAACAGCTCTGGTTTTATAATATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CAA 90 bp GTTAATAAACAGATCTTCCAAAACACACAGTTACCTGGTTCACAGATAGCTGCTCAGATCCACTTGGCCTaGAGGTTTCCGGATGACATC +
Preference number: 5 (lower is better)
Translates to: VNKQIFQNTQLPGSQIAAQIHLA*RFPDDI
Trigger: GATGTCATCCGGAAACCTCAAGGCCAAGTGGATCTG...AGCAGCTATCTGTGAACCAGGTAACTGTGTGTTTTGGAAGATCTGTTTATTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CAA 90 bp CTTCCAAAACACACAGTTACCTGGTTCACAGATAGCTGCTTTTTATTGACAAACCGTCTCCCCTTTGACTaGACTGCGAAAGTACAGCCT +
Preference number: 5 (lower is better)
Translates to: LPKHTVTWFTDSCFLLTNRLPFD*TAKVQP
Trigger: AGGCTGTACTTTCGCAGTCAAGTCAAAGGGGAGACG...GTTTGTCAATAAAAAGCAGCTATCTGTGAACCAGGTAACTGTGTGTTTTGGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CAA 90 bp TCAGGAACCTGTGGTACATGTGACTTGTTCGAGGTAGAAATGTCTCAGCTAGATGCAATGTTGCCCATTTaGTGGTCAACATATCTGCCA +
Preference number: 5 (lower is better)
Translates to: SGTCGTCDLFEVEMSQLDAMLPI*WSTYLP
Trigger: TGGCAGATATGTTGACCACAAAATGGGCAACATTGC...ATCTAGCTGAGACATTTCTACCTCGAACAAGTCACATGTACCACAGGTTCCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CAA 90 bp TCTGGGATAGATCTAATCACAAGCATGAAGTCATCCCTGCAGCCACCAAACGTTCTTTTTCCAGAGCTCTaGTCTGGGATAGATCTAATC +
Preference number: 5 (lower is better)
Translates to: SGIDLITSMKSSLQPPNVLFPEL*SGIDLI
Trigger: GATTAGATCTATCCCAGACAAGAGCTCTGGAAAAAG...AACGTTTGGTGGCTGCAGGGATGACTTCATGCTTGTGATTAGATCTATCCCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561057.1
ENST00000561370.5
CDS-3UTR CAA 90 bp ATCAGAAGGTCTGAATTGAGGGGGATTATGGTATTATCAGTAAGGCAAAAGATGCAGCACCTTTCCCATTaGGGAAAGGCAGCCCAGTTT +
Preference number: 5 (lower is better)
Translates to: IRRSELRGIMVLSVRQKMQHLSH*GKAAQF
Trigger: AAACTGGGCTGCCTTTCCCAAATGGGAAAGGTGCTG...CATCTTTTGCCTTACTGATAATACCATAATCCCCCTCAATTCAGACCTTCTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CAA 90 bp TGTACCCTCACCCTCAAACTAATTCCCAGCAGAAGTTTGCCAGAAGTCTCAAGGAAGATACACACATTGTaGGGGTTAAAGGCTTGGTTT +
Preference number: 5 (lower is better)
Translates to: CTLTLKLIPSRSLPEVSRKIHTL*GLKAWF
Trigger: AAACCAAGCCTTTAACCCCAACAATGTGTGTATCTT...CCTTGAGACTTCTGGCAAACTTCTGCTGGGAATTAGTTTGAGGGTGAGGGTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CAA 90 bp ACCTGTGGTACATGTGACTTGTTCGAGGTAGAAATGTCTCAGCTAGATCCCCAATGTGGTACATGTGACTaGTTCGAGGTAGAAATGTCT +
Preference number: 5 (lower is better)
Translates to: TCGTCDLFEVEMSQLDPQCGTCD*FEVEMS
Trigger: AGACATTTCTACCTCGAACAAGTCACATGTACCACA...TTGGGGATCTAGCTGAGACATTTCTACCTCGAACAAGTCACATGTACCACAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329153.10
ENST00000559168.1
CDS-3UTR CAA 90 bp TATATATCTCTAAATCCAGAGGCACTAGTGGTGTTGGGGAATCGGGTAGGAGAACTGGCCTCGCAGTTTTaGCCTAGGATATATATCTCT +
Preference number: 5 (lower is better)
Translates to: YISLNPEALVVLGNRVGELASQF*PRIYIS
Trigger: AGAGATATATATCCTAGGCAAAAACTGCGAGGCCAG...TTCTCCTACCCGATTCCCCAACACCACTAGTGCCTCTGGATTTAGAGATATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559168.1
CDS TCA 90 bp GTCGCAACAATCAATGATTGCATCTCCATTGGCAAACATTTAAAGTaGCTGACTATCTCAGTGTTGGTGAGAGTATGGGGAGAAGATGGG +
Preference number: 5 (lower is better)
Translates to: VATINDCISIGKHLK*LTISVLVRVWGEDG
Trigger: CCCATCTTCTCCCCATACTCTCACCAACACTGAGATAGTCAGTCACTTTAAATGTTTGCCAATGGAGATGCAATCATTGATTGTTGCGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557971.5
ENST00000558981.5
CDS-3UTR CAA 90 bp GTTATCCTTATTGGCCTTAGAGATACCCAAGATATTATAAAACCAGAGCTGTTATCTTCCCAGATGAGGTaGAAGGGGCTTGGCCTCTAC +
Preference number: 5 (lower is better)
Translates to: VILIGLRDTQDIIKPELLSSQMR*KGLGLY
Trigger: GTAGAGGCCAAGCCCCTTCAACCTCATCTGGGAAGA...TAACAGCTCTGGTTTTATAATATCTTGGGTATCTCTAAGGCCAATAAGGATAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CAA 90 bp TATTATAAAACCAGAGCTGTTATGTCTGTCACCAGCCCTGCAGGAATTATTCAGAAGTACAGCCTGTTCTaGTACATCAGCTTCACGACG +
Preference number: 5 (lower is better)
Translates to: YYKTRAVMSVTSPAGIIQKYSLF*YISFTT
Trigger: CGTCGTGAAGCTGATGTACAAGAACAGGCTGTACTT...CTGAATAATTCCTGCAGGGCTGGTGACAGACATAACAGCTCTGGTTTTATAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CAA 90 bp CCCTGTCTATGTCTAGAATCAGGTAGCATCTGGAGTCATTATTCTTATGAAAAATGCAGCCACCAAACGTaGTCACTGAAGAGTAGGGGT +
Preference number: 5 (lower is better)
Translates to: PCLCLESGSIWSHYSYEKCSHQT*SLKSRG
Trigger: ACCCCTACTCTTCAGTGACAACGTTTGGTGGCTGCA...TTTTTCATAAGAATAATGACTCCAGATGCTACCTGATTCTAGACATAGACAGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329153.10
ENST00000561370.5
CDS-3UTR CAA 90 bp GGGTTAAAGGCTTGGTTTTGGGTGCTACTGCTAAATATACAGTTTTCAGCACTTCTGGCCTCGCAGTTTTaGCTGTGCAAAAGATACACA +
Preference number: 5 (lower is better)
Translates to: GLKAWFWVLLLNIQFSALLASQF*LCKRYT
Trigger: TGTGTATCTTTTGCACAGCAAAAACTGCGAGGCCAG...AAGTGCTGAAAACTGTATATTTAGCAGTAGCACCCAAAACCAAGCCTTTAACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS TCA 90 bp TGCCATGCGAGCTTTAAAAATGTGTGGGGACGTCGCAACAATCAATaGTTGCATCTCCATTGGCAAACATTTAAAGTGACTGACTATCTC +
Preference number: 5 (lower is better)
Translates to: CHASFKNVWGRRNNQ*LHLHWQTFKVTDYL
Trigger: GAGATAGTCAGTCACTTTAAATGTTTGCCAATGGAGATGCAATCATTGATTGTTGCGACGTCCCCACACATTTTTAAAGCTCGCATGGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000557971.5
ENST00000558981.5
CDS-3UTR CAA 90 bp CCAAGATATTATAAAACCAGAGCTGTTATGTCTGTCACCAGCCCTGCAGGAATTTTTCTTGAACAGTTTTaGCTTCCTCTGCCCTCATCT +
Preference number: 5 (lower is better)
Translates to: PRYYKTRAVMSVTSPAGIFLEQF*LPLPSS
Trigger: AGATGAGGGCAGAGGAAGCAAAAACTGTTCAAGAAA...AATTCCTGCAGGGCTGGTGACAGACATAACAGCTCTGGTTTTATAATATCTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CAA 90 bp CTTCCAAAACACACAGTTACCTGGTTCACAGATAGCTGCTTTTTATTGACAAACTCAAGCTTTGCCAACTaGAGTGTCACCCATTCCTTG +
Preference number: 5 (lower is better)
Translates to: LPKHTVTWFTDSCFLLTNSSFAN*SVTHSL
Trigger: CAAGGAATGGGTGACACTCAAGTTGGCAAAGCTTGA...GTTTGTCAATAAAAAGCAGCTATCTGTGAACCAGGTAACTGTGTGTTTTGGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CAA 90 bp TCAGGAACCTGTGGTACATGTGACTTGTTCGAGGTAGAAATGTCTCAGCTAGATGTTAAAGGCTTGGTTTaGGGTGCTACTGCTAAATAT +
Preference number: 5 (lower is better)
Translates to: SGTCGTCDLFEVEMSQLDVKGLV*GATAKY
Trigger: ATATTTAGCAGTAGCACCCAAAACCAAGCCTTTAAC...ATCTAGCTGAGACATTTCTACCTCGAACAAGTCACATGTACCACAGGTTCCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CAA 90 bp CCAAGATATTATAAAACCAGAGCTGTTATGTCTGTCACCAGCCCTGCAGGAATTAACACAGCTCCATTCTaGTTTACTCTTCCTTTGGAC +
Preference number: 5 (lower is better)
Translates to: PRYYKTRAVMSVTSPAGINTAPF*FTLPLD
Trigger: GTCCAAAGGAAGAGTAAACAAGAATGGAGCTGTGTT...AATTCCTGCAGGGCTGGTGACAGACATAACAGCTCTGGTTTTATAATATCTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329153.10
ENST00000559168.1
CDS TCA 90 bp AGTGAGAGTGTGCTGCATATTTATAAATGCATCGGAAGGCCTTACTaGATAAACACTAAACCATTCATGATAGCTTCCTCTGGGCTTAGG +
Preference number: 5 (lower is better)
Translates to: SESVLHIYKCIGRPY*INTKPFMIASSGLR
Trigger: CCTAAGCCCAGAGGAAGCTATCATGAATGGTTTAGTGTTTATTCAGTAAGGCCTTCCGATGCATTTATAAATATGCAGCACACTCTCACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558981.5
CDS CCA 90 bp GTCCAAGAGACTACTGGAAACTATTTGCCTGGAGACATACTGAGATaGAGGGATGGGATTTTCTTACTCAAATTGATAGAAAGTCAGGAT +
Preference number: 5 (lower is better)
Translates to: VQETTGNYLPGDILR*RDGIFLLKLIESQD
Trigger: ATCCTGACTTTCTATCAATTTGAGTAAGAAAATCCCATCCCTCCATCTCAGTATGTCTCCAGGCAAATAGTTTCCAGTAGTCTCTTGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559981.1
CDS-3UTR CAA 90 bp AATGTTATCCTTATTGGCCTTAGAGATACCCAAGATATTATAAAACCAGAGCTGAGAGCCAATTCCTTGTaGATAGGAAACCTCCCTGCC +
Preference number: 5 (lower is better)
Translates to: NVILIGLRDTQDIIKPELRANSL*IGNLPA
Trigger: GGCAGGGAGGTTTCCTATCAACAAGGAATTGGCTCT...CAGCTCTGGTTTTATAATATCTTGGGTATCTCTAAGGCCAATAAGGATAACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CAA 90 bp GATATTATAAAACCAGAGCTGTTATGTCTGTCACCAGCCCTGCAGGAATTATTCCTTTTTCCAGAGCTCTaGTCTGGGATAGATCTAATC +
Preference number: 5 (lower is better)
Translates to: DIIKPELLCLSPALQELFLFPEL*SGIDLI
Trigger: GATTAGATCTATCCCAGACAAGAGCTCTGGAAAAAG...GAATAATTCCTGCAGGGCTGGTGACAGACATAACAGCTCTGGTTTTATAATATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329153.10
ENST00000559168.1
CDS-3UTR CAA 90 bp ATAAAACCAGAGCTGTTATGTCTGTCACCAGCCCTGCAGGAATTATTCAGGAACATAATGTTATCCTTATaGGCCTTAGAGATACCCAAG +
Preference number: 5 (lower is better)
Translates to: IKPELLCLSPALQELFRNIMLSL*ALEIPK
Trigger: CTTGGGTATCTCTAAGGCCAATAAGGATAACATTAT...GTTCCTGAATAATTCCTGCAGGGCTGGTGACAGACATAACAGCTCTGGTTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329153.10
ENST00000559168.1
CDS-3UTR CAA 90 bp GTTATCCTTATTGGCCTTAGAGATACCCAAGATATTATAAAACCAGAGCTGTTACTGATGAGCTCATCTTaGCCCTTTATGGCTTTCAGC +
Preference number: 5 (lower is better)
Translates to: VILIGLRDTQDIIKPELLLMSSS*PFMAFS
Trigger: GCTGAAAGCCATAAAGGGCAAAGATGAGCTCATCAG...TAACAGCTCTGGTTTTATAATATCTTGGGTATCTCTAAGGCCAATAAGGATAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CAA 90 bp GTTAATAAACAGATCTTCCAAAACACACAGTTACCTGGTTCACAGATAGCTGCTAGAAAATTAGCTTCCTaGAGAGTACCAGTGCAGAAA +
Preference number: 5 (lower is better)
Translates to: VNKQIFQNTQLPGSQIAARKLAS*RVPVQK
Trigger: TTTCTGCACTGGTACTCTCAAGGAAGCTAATTTTCT...AGCAGCTATCTGTGAACCAGGTAACTGTGTGTTTTGGAAGATCTGTTTATTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CAA 90 bp CTTATTGGCCTTAGAGATACCCAAGATATTATAAAACCAGAGCTGTTATGTCTGTGTGAGGAAAACAGCTaGAATCTTAGCAGGTATAGC +
Preference number: 5 (lower is better)
Translates to: LIGLRDTQDIIKPELLCLCEENS*NLSRYS
Trigger: GCTATACCTGCTAAGATTCAAGCTGTTTTCCTCACA...CAGACATAACAGCTCTGGTTTTATAATATCTTGGGTATCTCTAAGGCCAATAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CAA 90 bp CTTAGAGATACCCAAGATATTATAAAACCAGAGCTGTTATGTCTGTCACCAGCCAAAAGCAGAGTGCATTaGCTTGGTCTTTTACAAGAA +
Preference number: 5 (lower is better)
Translates to: LRDTQDIIKPELLCLSPAKSRVH*LGLLQE
Trigger: TTCTTGTAAAAGACCAAGCAAATGCACTCTGCTTTT...GGCTGGTGACAGACATAACAGCTCTGGTTTTATAATATCTTGGGTATCTCTAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CAA 90 bp CCCTGTCTATGTCTAGAATCAGGTAGCATCTGGAGTCATTATTCTTATGAAAAAATCAGAAGGTCTGAATaGAGGGGGATTATGGTATTA +
Preference number: 5 (lower is better)
Translates to: PCLCLESGSIWSHYSYEKIRRSE*RGIMVL
Trigger: TAATACCATAATCCCCCTCAATTCAGACCTTCTGAT...TTTTTCATAAGAATAATGACTCCAGATGCTACCTGATTCTAGACATAGACAGGG
38% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS GCA 90 bp TCTGTCCTACAGACACATGTAGATATAAGTTCCCAAAGATATATGTaGACAGTGATGTTCATGGCAACATTCATTTTAGAGAAAAACAGG +
Preference number: 5 (lower is better)
Translates to: SVLQTHVDISSQRYM*TVMFMATFILEKNR
Trigger: CCTGTTTTTCTCTAAAATGAATGTTGCCATGAACATCACTGTGCACATATATCTTTGGGAACTTATATCTACATGTGTCTGTAGGACAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000557971.5
ENST00000558981.5
CDS-3UTR CAA 90 bp AATGTTATCCTTATTGGCCTTAGAGATACCCAAGATATTATAAAACCAGAGCTGCTTTGCAGCTTTTTCTaGAACAGTTTTTGCTTCCTC +
Preference number: 5 (lower is better)
Translates to: NVILIGLRDTQDIIKPELLCSFF*NSFCFL
Trigger: GAGGAAGCAAAAACTGTTCAAGAAAAAGCTGCAAAG...CAGCTCTGGTTTTATAATATCTTGGGTATCTCTAAGGCCAATAAGGATAACATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CAA 90 bp AATGTTATCCTTATTGGCCTTAGAGATACCCAAGATATTATAAAACCAGAGCTGCAGAGTGTAGGAGAATaGGAAATTTTAGTCCTATCC +
Preference number: 5 (lower is better)
Translates to: NVILIGLRDTQDIIKPELQSVGE*EILVLS
Trigger: GGATAGGACTAAAATTTCCAATTCTCCTACACTCTG...CAGCTCTGGTTTTATAATATCTTGGGTATCTCTAAGGCCAATAAGGATAACATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS-3UTR CAA 90 bp AATGTTATCCTTATTGGCCTTAGAGATACCCAAGATATTATAAAACCAGAGCTGATGAACTCTTTCGTTTaGTTTTTGTTAGGGGAGGGT +
Preference number: 5 (lower is better)
Translates to: NVILIGLRDTQDIIKPELMNSFV*FLLGEG
Trigger: ACCCTCCCCTAACAAAAACAAAACGAAAGAGTTCAT...CAGCTCTGGTTTTATAATATCTTGGGTATCTCTAAGGCCAATAAGGATAACATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS CCA 72 bp GCAGCAGGATGGACACCACTTCCATGCGCGATGGCCTaGCTTCCCGCTCCCCGGTCCGCAGGGTCCGCTCCA +
Preference number: 6 (lower is better)
Translates to: AAGWTPLPCAMA*LPAPRSAGSAP
Trigger: TGGAGCGGACCCTGCGGACCGGGGAGCGGGAAGCCAGGCCATCGCGCATGGAAGTGGTGTCCATCCTGCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329153.10
ENST00000557971.5
ENST00000558386.5
ENST00000561370.5
CDS CCA 72 bp GTTACGCAGCAGGATGGACACCACTTCCATGCGCGATaGCCTGGCTTCCCGCTCCCCGGTCCGCAGGGTCCG +
Preference number: 6 (lower is better)
Translates to: VTQQDGHHFHAR*PGFPLPGPQGP
Trigger: CGGACCCTGCGGACCGGGGAGCGGGAAGCCAGGCCATCGCGCATGGAAGTGGTGTCCATCCTGCTGCGTAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329153.10
ENST00000557971.5
ENST00000558386.5
ENST00000561370.5
CDS CAA 72 bp GGATGCTGTCCCGCGGGGTGCCAGGAGCCCGCACCTTaGGTAGGGTCAGACTGCTGCCAGGACCACCTTCCC +
Preference number: 6 (lower is better)
Translates to: GCCPAGCQEPAP*VGSDCCQDHLP
Trigger: GGGAAGGTGGTCCTGGCAGCAGTCTGACCCTACCAAAGGTGCGGGCTCCTGGCACCCCGCGGGACAGCATCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS CAA 90 bp TGGCCAACTGGATGCTGTCCCGCGGGGTGCCAGGAGCCCGCACCTTaGGTAGGGTCAGACTGCTGCCAGGACCACCTTCCCTGGCAGAGG +
Preference number: 6 (lower is better)
Translates to: WPTGCCPAGCQEPAP*VGSDCCQDHLPWQR
Trigger: CCTCTGCCAGGGAAGGTGGTCCTGGCAGCAGTCTGACCCTACCAAAGGTGCGGGCTCCTGGCACCCCGCGGGACAGCATCCAGTTGGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS GCA 72 bp TTACCTTGGTCAGCCAGCCCTTCACGGTGGGCTTGGTaGCACCCCGAAGCAGAGCTGGAGGCCCGGTGGCCT +
Preference number: 6 (lower is better)
Translates to: LPWSASPSRWAW*HPEAELEARWP
Trigger: AGGCCACCGGGCCTCCAGCTCTGCTTCGGGGTGGCACCAAGCCCACCGTGAAGGGCTGGCTGACCAAGGTAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329153.10
ENST00000557971.5
ENST00000558386.5
ENST00000558981.5
CDS CCA 72 bp GCTGGAGGCCCGGTGGCCTGCACCTTCAGCAGGCTCTaGAGTACTCGGATCCACTCCTCCAGCAGGCTGGGT +
Preference number: 6 (lower is better)
Translates to: AGGPVACTFSRL*STRIHSSSRLG
Trigger: ACCCAGCCTGCTGGAGGAGTGGATCCGAGTACTCCAGAGCCTGCTGAAGGTGCAGGCCACCGGGCCTCCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329153.10
ENST00000557971.5
ENST00000558386.5
ENST00000558981.5
CDS CCA 72 bp GCTTGGTGCCACCCCGAAGCAGAGCTGGAGGCCCGGTaGCCTGCACCTTCAGCAGGCTCTGGAGTACTCGGA +
Preference number: 6 (lower is better)
Translates to: AWCHPEAELEAR*PAPSAGSGVLG
Trigger: TCCGAGTACTCCAGAGCCTGCTGAAGGTGCAGGCCACCGGGCCTCCAGCTCTGCTTCGGGGTGGCACCAAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329153.10
ENST00000557971.5
ENST00000558386.5
ENST00000558981.5
CDS CCA 72 bp GCTTTACCTTGGTCAGCCAGCCCTTCACGGTGGGCTTaGTGCCACCCCGAAGCAGAGCTGGAGGCCCGGTGG +
Preference number: 6 (lower is better)
Translates to: ALPWSASPSRWA*CHPEAELEARW
Trigger: CCACCGGGCCTCCAGCTCTGCTTCGGGGTGGCACCAAGCCCACCGTGAAGGGCTGGCTGACCAAGGTAAAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329153.10
ENST00000557971.5
ENST00000558386.5
ENST00000558981.5
CDS GCA 72 bp GGTGCCTTTTGGCCAACTGGATGCTGTCCCGCGGGGTaGCAGGAGCCCGCACCTTTGGTAGGGTCAGACTGC +
Preference number: 6 (lower is better)
Translates to: GAFWPTGCCPAG*QEPAPLVGSDC
Trigger: GCAGTCTGACCCTACCAAAGGTGCGGGCTCCTGGCACCCCGCGGGACAGCATCCAGTTGGCCAAAAGGCACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS GCA 72 bp CTCTCCCAACCCTGCAGCTTGCACTCCTGGTCCAAGTaGCCATGGTGTGGCCAACCCCCAGCCGGGACTCTG +
Preference number: 6 (lower is better)
Translates to: LSQPCSLHSWSK*PWCGQPPAGTL
Trigger: CAGAGTCCCGGCTGGGGGTTGGCCACACCATGGGCACTTGGACCAGGAGTGCAAGCTGCAGGGTTGGGAGAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557971.5
ENST00000558981.5
CDS CCA 72 bp GCTGCCTTCAGACCCTGGGCCTGGGAGCCACTGTCCTaGCCCATAGGCTGGATTCCCGGCTCTGAAGGGACA +
Preference number: 6 (lower is better)
Translates to: AAFRPWAWEPLS*PIGWIPGSEGT
Trigger: TGTCCCTTCAGAGCCGGGAATCCAGCCTATGGGCCAGGACAGTGGCTCCCAGGCCCAGGGTCTGAAGGCAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS CCA 72 bp CCCTGCTGGGGGTGGCTCCTCCATCTCCATCTTCTCTaGTTCCTCCCGGGACCTAGCTCGGGACTCCAGCTC +
Preference number: 6 (lower is better)
Translates to: PCWGWLLHLHLL*FLPGPSSGLQL
Trigger: GAGCTGGAGTCCCGAGCTAGGTCCCGGGAGGAACCAGAGAAGATGGAGATGGAGGAGCCACCCCCAGCAGGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS CCA 72 bp TCTCCAGTGACTCCCCGCCCAGGCCCAGCCCGTCGGTaGAGTAGGATGAGGTGCGCTGCAGTTTGTGCTCAG +
Preference number: 6 (lower is better)
Translates to: SPVTPRPGPARR*SRMRCAAVCAQ
Trigger: CTGAGCACAAACTGCAGCGCACCTCATCCTACTCCACCGACGGGCTGGGCCTGGGCGGGGAGTCACTGGAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329153.10
ENST00000557971.5
ENST00000558386.5
ENST00000558981.5
ENST00000561135.1
ENST00000561456.5
CDS TCA 72 bp ACATCCAGGGGGTCCAAGCACACAGCTGTGAGCCTCTaGGTGGGCACGTGTAGGCAGTGGCTTCGTGGGGCC +
Preference number: 6 (lower is better)
Translates to: TSRGSKHTAVSL*VGTCRQWLRGA
Trigger: GGCCCCACGAAGCCACTGCCTACACGTGCCCACTCAGAGGCTCACAGCTGTGTGCTTGGACCCCCTGGATGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558296.1
CDS GCA 72 bp GGGTGCCAGGAGCCCGCACCTTTGGTAGGGTCAGACTaGTGCCAGGACCACCTTCCCTGGCAGAGGTCTTTG +
Preference number: 6 (lower is better)
Translates to: GCQEPAPLVGSD*CQDHLPWQRSL
Trigger: CAAAGACCTCTGCCAGGGAAGGTGGTCCTGGCAGCAGTCTGACCCTACCAAAGGTGCGGGCTCCTGGCACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS GCA 72 bp CGCCCAGGCCCAGCCCGTCGGTGGAGTAGGATGAGGTaGGCTGCAGTTTGTGCTCAGGCTCTGAGTAGTCAC +
Preference number: 6 (lower is better)
Translates to: RPGPARRWSRMR*AAVCAQALSSH
Trigger: GTGACTACTCAGAGCCTGAGCACAAACTGCAGCGCACCTCATCCTACTCCACCGACGGGCTGGGCCTGGGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329153.10
ENST00000557971.5
ENST00000558386.5
ENST00000558981.5
ENST00000561135.1
ENST00000561456.5
CDS GCA 72 bp TGGGAGGCTGTCACCTTGACACTTCCCTGCAGGCAGTaGTCCAGGTCCCTGCCCGAGGGATCGTCCGTGAAG +
Preference number: 6 (lower is better)
Translates to: WEAVTLTLPCRQ*SRSLPEGSSVK
Trigger: CTTCACGGACGATCCCTCGGGCAGGGACCTGGAGCACTGCCTGCAGGGAAGTGTCAAGGTGACAGCCTCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558296.1
CDS TCA 72 bp GCCACTGTCCTGGCCCATAGGCTGGATTCCCGGCTCTaGAGGGACAGAATCCTGCTCTGCAGCTCCGTAGGG +
Preference number: 6 (lower is better)
Translates to: ATVLAHRLDSRL*RDRILLCSSVG
Trigger: CCCTACGGAGCTGCAGAGCAGGATTCTGTCCCTTCAGAGCCGGGAATCCAGCCTATGGGCCAGGACAGTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS TCA 72 bp GGCAGTGCTCCAGGTCCCTGCCCGAGGGATCGTCCGTaGAGAGGGCAAAGCCAGAGTGGGATGGCTTTCTCA +
Preference number: 6 (lower is better)
Translates to: GSAPGPCPRDRP*RGQSQSGMAFS
Trigger: TGAGAAAGCCATCCCACTCTGGCTTTGCCCTCTTCACGGACGATCCCTCGGGCAGGGACCTGGAGCACTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329153.10
ENST00000557971.5
ENST00000558296.1
ENST00000558386.5
ENST00000560100.1
ENST00000561370.5
CDS TCA 72 bp AGCAGCTGCCCATCACGACTGAATGCCTGCCCACTGTaGCCCTCGCTCCTTGCCACTAGGGGGCCAGAAAGC +
Preference number: 6 (lower is better)
Translates to: SSCPSRLNACPL*PSLLATRGPES
Trigger: GCTTTCTGGCCCCCTAGTGGCAAGGAGCGAGGGTCACAGTGGGCAGGCATTCAGTCGTGATGGGCAGCTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557971.5
ENST00000558981.5
CDS GCA 72 bp TGCCAGGAGCCCGCACCTTTGGTAGGGTCAGACTGCTaGCAGGACCACCTTCCCTGGCAGAGGTCTTTGTCC +
Preference number: 6 (lower is better)
Translates to: CQEPAPLVGSDC*QDHLPWQRSLS
Trigger: GGACAAAGACCTCTGCCAGGGAAGGTGGTCCTGGCAGCAGTCTGACCCTACCAAAGGTGCGGGCTCCTGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS GCA 72 bp CTGCAAGACAGGCCCCTCCCTCACTGCAGCTCAGGCTaGAAAACAGTCCTCTCCCAACCCTGCAGCTTGCAC +
Preference number: 6 (lower is better)
Translates to: LQDRPLPHCSSG*KTVLSQPCSLH
Trigger: GTGCAAGCTGCAGGGTTGGGAGAGGACTGTTTTGCAGCCTGAGCTGCAGTGAGGGAGGGGCCTGTCTTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557971.5
ENST00000558981.5
CDS CCA 72 bp AAAACAGTCCTCTCCCAACCCTGCAGCTTGCACTCCTaGTCCAAGTGCCCATGGTGTGGCCAACCCCCAGCC +
Preference number: 6 (lower is better)
Translates to: KTVLSQPCSLHS*SKCPWCGQPPA
Trigger: GGCTGGGGGTTGGCCACACCATGGGCACTTGGACCAGGAGTGCAAGCTGCAGGGTTGGGAGAGGACTGTTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000557971.5
ENST00000558981.5
CDS TCA 72 bp GACTCAGAGGAGGGGACCGAGATTCGGAAACTCGCCTaGGAGCTGCAGTCATCGTCAGACCCAGAGGACTCG +
Preference number: 6 (lower is better)
Translates to: DSEEGTEIRKLA*ELQSSSDPEDS
Trigger: CGAGTCCTCTGGGTCTGACGATGACTGCAGCTCTCAGGCGAGTTTCCGAATCTCGGTCCCCTCCTCTGAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329153.10
ENST00000557971.5
ENST00000558386.5
ENST00000558981.5
ENST00000561456.5
CDS GCA 72 bp AAGGGGCTTGCTGCTTCAGAAACAGAGTCCTTGCTCTaGAGGGCACCTGGGGAAGGTGCAAGCACAGCTGCC +
Preference number: 6 (lower is better)
Translates to: KGLAASETESLL*RAPGEGASTAA
Trigger: GGCAGCTGTGCTTGCACCTTCCCCAGGTGCCCTGCAGAGCAAGGACTCTGTTTCTGAAGCAGCAAGCCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS GCA 72 bp ATGGCATCACAGATCTTGACACTTCCCTGCAGGCAGTaGTCCAGGTCCCTGCCCGAGGGATCGTCCGTGAAG +
Preference number: 6 (lower is better)
Translates to: MASQILTLPCRQ*SRSLPEGSSVK
Trigger: CTTCACGGACGATCCCTCGGGCAGGGACCTGGAGCACTGCCTGCAGGGAAGTGTCAAGATCTGTGATGCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329153.10
ENST00000557971.5
ENST00000558386.5
ENST00000560100.1
ENST00000561370.5
CDS TCA 72 bp AGGAGCAGCCGTTCTCGGTCCGTCTCCCCTTTGACTTaGCTGCGAAAGTACAGCCCTCAGACTTTCCGGGGT +
Preference number: 6 (lower is better)
Translates to: RSSRSRSVSPLT*LRKYSPQTFRG
Trigger: ACCCCGGAAAGTCTGAGGGCTGTACTTTCGCAGTCAAGTCAAAGGGGAGACGGACCGAGAACGGCTGCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561370.5
CDS GCA 72 bp TTCACGACGCGTGTCCCACCCTCAGACTTTCCGGGGTaGAGCTCCTTCATGGCTTGTTCCCACTTGGAGATG +
Preference number: 6 (lower is better)
Translates to: FTTRVPPSDFPG*SSFMACSHLEM
Trigger: CATCTCCAAGTGGGAACAAGCCATGAAGGAGCTGCACCCCGGAAAGTCTGAGGGTGGGACACGCGTCGTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329153.10
ENST00000557971.5
ENST00000558366.5
ENST00000558386.5
ENST00000560100.1
CDS GCA 72 bp TGCAGCTCAGGCTGCAAAACAGTCCTCTCCCAACCCTaGAGCTTGCACTCCTGGTCCAAGTGCCCATGGTGT +
Preference number: 6 (lower is better)
Translates to: CSSGCKTVLSQP*SLHSWSKCPWC
Trigger: ACACCATGGGCACTTGGACCAGGAGTGCAAGCTGCAGGGTTGGGAGAGGACTGTTTTGCAGCCTGAGCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557971.5
ENST00000558981.5
CDS CCA 72 bp TGCTTCAGAAACAGAGTCCTTGCTCTGCAGGGCACCTaGGGAAGGTGCAAGCACAGCTGCCTTCAGACCCTG +
Preference number: 6 (lower is better)
Translates to: CFRNRVLALQGT*GRCKHSCLQTL
Trigger: CAGGGTCTGAAGGCAGCTGTGCTTGCACCTTCCCCAGGTGCCCTGCAGAGCAAGGACTCTGTTTCTGAAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS CCA 72 bp GGATCACCAGGGTGCAGTGGGAGGAAAGCAACCGTCTaGTTCCTCCAGCCTCATAGTCCTCGTCTGAGTCAC +
Preference number: 6 (lower is better)
Translates to: GSPGCSGRKATV*FLQPHSPRLSH
Trigger: GTGACTCAGACGAGGACTATGAGGCTGGAGGAACCAGACGGTTGCTTTCCTCCCACTGCACCCTGGTGATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329153.10
ENST00000557971.5
ENST00000558386.5
CDS CCA 72 bp GGGATCGTCCGTGAAGAGGGCAAAGCCAGAGTGGGATaGCTTTCTCATGCCTATCTCCTGGTTCAGCCGCTG +
Preference number: 6 (lower is better)
Translates to: GIVREEGKARVG*LSHAYLLVQPL
Trigger: CAGCGGCTGAACCAGGAGATAGGCATGAGAAAGCCATCCCACTCTGGCTTTGCCCTCTTCACGGACGATCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329153.10
ENST00000557971.5
ENST00000558296.1
ENST00000558386.5
ENST00000560100.1
ENST00000561370.5
CDS CCA 72 bp CCCGAGGGATCGTCCGTGAAGAGGGCAAAGCCAGAGTaGGATGGCTTTCTCATGCCTATCTCCTGGTTCAGC +
Preference number: 6 (lower is better)
Translates to: PEGSSVKRAKPE*DGFLMPISWFS
Trigger: GCTGAACCAGGAGATAGGCATGAGAAAGCCATCCCACTCTGGCTTTGCCCTCTTCACGGACGATCCCTCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329153.10
ENST00000557971.5
ENST00000558296.1
ENST00000558386.5
ENST00000560100.1
ENST00000561370.5
CDS CCA 72 bp TCTCCTGGTTCAGCCGCTGGAGGAACTCATCAACCGTaGAAGAGCCGTCAAAACCAACCACCTGAGGCGGGA +
Preference number: 6 (lower is better)
Translates to: SPGSAAGGTHQP*KSRQNQPPEAG
Trigger: TCCCGCCTCAGGTGGTTGGTTTTGACGGCTCTTCCACGGTTGATGAGTTCCTCCAGCGGCTGAACCAGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560100.1
CDS CCA 72 bp GCTTCTCAGGCCTCCCTTCCCACACACCATCTTCTGTaGTCCCCAAAGCAGCTGCCCATCACGACTGAATGC +
Preference number: 6 (lower is better)
Translates to: ASQASLPTHHLL*SPKQLPITTEC
Trigger: GCATTCAGTCGTGATGGGCAGCTGCTTTGGGGACCACAGAAGATGGTGTGTGGGAAGGGAGGCCTGAGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557971.5
ENST00000558981.5
CDS CAA 72 bp AAGGAGCAGCCGTTCTCGGTCCGTCTCCCCTTTGACTaGACTGCGAAAGTACAGCCCTCAGACTTTCCGGGG +
Preference number: 6 (lower is better)
Translates to: KEQPFSVRLPFD*TAKVQPSDFPG
Trigger: CCCCGGAAAGTCTGAGGGCTGTACTTTCGCAGTCAAGTCAAAGGGGAGACGGACCGAGAACGGCTGCTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561370.5
CDS CAA 90 bp GTCAGGCAGCGTTTCTGCCAGTCTACGCTGGCCGGCGCCTCCACCTaGAGTTCTGCCATGATGGAATCGACTTCTGGATTATTCTGGGGA +
Preference number: 6 (lower is better)
Translates to: VRQRFCQSTLAGAST*SSAMMESTSGLFWG
Trigger: TCCCCAGAATAATCCAGAAGTCGATTCCATCATGGCAGAACTCAAGGTGGAGGCGCCGGCCAGCGTAGACTGGCAGAAACGCTGCCTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS CAA 90 bp GCGTGTCCCACCCTCAGACTTTCCGGGGTGCAGCTCCTTCATGGCTaGTTCCCACTTGGAGATGGCATCACAGATCTTGACACTTCCCTG +
Preference number: 6 (lower is better)
Translates to: ACPTLRLSGVQLLHG*FPLGDGITDLDTSL
Trigger: CAGGGAAGTGTCAAGATCTGTGATGCCATCTCCAAGTGGGAACAAGCCATGAAGGAGCTGCACCCCGGAAAGTCTGAGGGTGGGACACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329153.10
ENST00000557971.5
ENST00000558386.5
ENST00000560100.1
CDS TCA 72 bp AGGCAAGGAGCAGCCGTTCTCGGTCCGTCTCCCCTTTaGCTTGACTGCGAAAGTACAGCCCTCAGACTTTCC +
Preference number: 6 (lower is better)
Translates to: RQGAAVLGPSPL*LDCESTALRLS
Trigger: GGAAAGTCTGAGGGCTGTACTTTCGCAGTCAAGTCAAAGGGGAGACGGACCGAGAACGGCTGCTCCTTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561370.5
CDS GCA 72 bp CCAGTCTACGCTGGCCGGCGCCTCCACCTTGAGTTCTaGCATGATGGAATCGACTTCTGGATTATTCTGGGG +
Preference number: 6 (lower is better)
Translates to: PVYAGRRLHLEF*HDGIDFWIILG
Trigger: CCCCAGAATAATCCAGAAGTCGATTCCATCATGGCAGAACTCAAGGTGGAGGCGCCGGCCAGCGTAGACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS GCA 72 bp GACCGTGCTGGAACTAGAATCCTCCAAGGGGCTTGCTaGTTCAGAAACAGAGTCCTTGCTCTGCAGGGCACC +
Preference number: 6 (lower is better)
Translates to: DRAGTRILQGAC*FRNRVLALQGT
Trigger: GGTGCCCTGCAGAGCAAGGACTCTGTTTCTGAAGCAGCAAGCCCCTTGGAGGATTCTAGTTCCAGCACGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS CCA 72 bp CTCCACCTTGAGTTCTGCCATGATGGAATCGACTTCTaGATTATTCTGGGGAGCCCTCCAGCGAGCTCGCGG +
Preference number: 6 (lower is better)
Translates to: LHLEFCHDGIDF*IILGSPPASSR
Trigger: CCGCGAGCTCGCTGGAGGGCTCCCCAGAATAATCCAGAAGTCGATTCCATCATGGCAGAACTCAAGGTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS CCA 72 bp GGCTCTGGAGTACTCGGATCCACTCCTCCAGCAGGCTaGGTGAATCGGCCGTCAGGTAGTAGGTTTTCTTCT +
Preference number: 6 (lower is better)
Translates to: GSGVLGSTPPAG*VNRPSGSRFSS
Trigger: AGAAGAAAACCTACTACCTGACGGCCGATTCACCCAGCCTGCTGGAGGAGTGGATCCGAGTACTCCAGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329153.10
ENST00000557971.5
ENST00000558386.5
ENST00000558981.5
CDS CCA 72 bp TTGGTAAAGTGCACGGGGATGCTGAAGGGCAAGGAGTaGTGGAAGGGGTTACGCAGCAGGATGGACACCACT +
Preference number: 6 (lower is better)
Translates to: LVKCTGMLKGKE*WKGLRSRMDTT
Trigger: AGTGGTGTCCATCCTGCTGCGTAACCCCTTCCACCACTCCTTGCCCTTCAGCATCCCCGTGCACTTTACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329153.10
ENST00000557971.5
ENST00000558386.5
ENST00000561370.5
CDS CAA 90 bp CTGCAGTCATCGTCAGACCCAGAGGACTCGTCCATAAAGGGCATGTaGCTGATCTGTGTAGCTCTCTGCAAGACAGGCCCCTCCCTCACT +
Preference number: 6 (lower is better)
Translates to: LQSSSDPEDSSIKGM*LICVALCKTGPSLT
Trigger: AGTGAGGGAGGGGCCTGTCTTGCAGAGAGCTACACAGATCAGCAACATGCCCTTTATGGACGAGTCCTCTGGGTCTGACGATGACTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557971.5
ENST00000558981.5
CDS TCA 72 bp CTGGAGTACTCGGATCCACTCCTCCAGCAGGCTGGGTaGATCGGCCGTCAGGTAGTAGGTTTTCTTCTCAGA +
Preference number: 6 (lower is better)
Translates to: LEYSDPLLQQAG*IGRQVVGFLLR
Trigger: TCTGAGAAGAAAACCTACTACCTGACGGCCGATTCACCCAGCCTGCTGGAGGAGTGGATCCGAGTACTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329153.10
ENST00000557971.5
ENST00000558386.5
ENST00000558981.5
CDS TCA 72 bp ATAGGAAACCTCCCTGCCACTATCTCTCTACTGGTTTaGGAGGCAAGGAGCAGCCGTTCTCGGTCCGTCTCC +
Preference number: 6 (lower is better)
Translates to: IGNLPATISLLV*EARSSRSRSVS
Trigger: GGAGACGGACCGAGAACGGCTGCTCCTTGCCTCTCAAACCAGTAGAGAGATAGTGGCAGGGAGGTTTCCTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329153.10
ENST00000557971.5
ENST00000558366.5
ENST00000558386.5
ENST00000559981.1
ENST00000561370.5
CDS GCA 72 bp GCTCCTGCATCTTGTCAGCCAGCAGCTCCCTTATCTTaGTGGCCTGTAGGCGGAACCGGAAAAGCTGAGTTT +
Preference number: 6 (lower is better)
Translates to: APASCQPAAPLS*WPVGGTGKAEF
Trigger: AAACTCAGCTTTTCCGGTTCCGCCTACAGGCCAGCAAGATAAGGGAGCTGCTGGCTGACAAGATGCAGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS GCA 72 bp CAGTATTACTTCTGGGAGACATATCTGAGAGCCGCATaGCCGATGTGGCCACAGCATAGATCCGGCTCTCCC +
Preference number: 6 (lower is better)
Translates to: QYYFWETYLRAA*PMWPQHRSGSP
Trigger: GGGAGAGCCGGATCTATGCTGTGGCCACATCGGGCATGCGGCTCTCAGATATGTCTCCCAGAAGTAATACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS GCA 72 bp CCCATGCTGCCACAGCACACTGGATGGAAAGCTCTGTaGTACAGAATAGAGGCCAGCCCTAGCTGCTCTGTT +
Preference number: 6 (lower is better)
Translates to: PMLPQHTGWKAL*YRIEASPSCSV
Trigger: AACAGAGCAGCTAGGGCTGGCCTCTATTCTGTAGCACAGAGCTTTCCATCCAGTGTGCTGTGGCAGCATGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559766.1
CDS GCA 72 bp TCCATAAAGGGCATGTTGCTGATCTGTGTAGCTCTCTaGAAGACAGGCCCCTCCCTCACTGCAGCTCAGGCT +
Preference number: 6 (lower is better)
Translates to: SIKGMLLICVAL*KTGPSLTAAQA
Trigger: AGCCTGAGCTGCAGTGAGGGAGGGGCCTGTCTTGCAGAGAGCTACACAGATCAGCAACATGCCCTTTATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557971.5
ENST00000558981.5
CDS CCA 72 bp CCTGCATCTTGTCAGCCAGCAGCTCCCTTATCTTGCTaGCCTGTAGGCGGAACCGGAAAAGCTGAGTTTCCA +
Preference number: 6 (lower is better)
Translates to: PASCQPAAPLSC*PVGGTGKAEFP
Trigger: TGGAAACTCAGCTTTTCCGGTTCCGCCTACAGGCCAGCAAGATAAGGGAGCTGCTGGCTGACAAGATGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS CCA 72 bp TTCTGGGAGACATATCTGAGAGCCGCATGCCCGATGTaGCCACAGCATAGATCCGGCTCTCCCAGGATGAAA +
Preference number: 6 (lower is better)
Translates to: FWETYLRAACPM*PQHRSGSPRMK
Trigger: TTTCATCCTGGGAGAGCCGGATCTATGCTGTGGCCACATCGGGCATGCGGCTCTCAGATATGTCTCCCAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS CCA 72 bp TCCCACCCTCAGACTTTCCGGGGTGCAGCTCCTTCATaGCTTGTTCCCACTTGGAGATGGCATCACAGATCT +
Preference number: 6 (lower is better)
Translates to: SHPQTFRGAAPS*LVPTWRWHHRS
Trigger: AGATCTGTGATGCCATCTCCAAGTGGGAACAAGCCATGAAGGAGCTGCACCCCGGAAAGTCTGAGGGTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329153.10
ENST00000557971.5
ENST00000558366.5
ENST00000558386.5
ENST00000560100.1
CDS CAA 72 bp CCCTCGAACAATTTGGCAGCGGGAGTTCAGATCCACTaGGCCTTGAGGTTTCCGGATGACATCACTCGGGGA +
Preference number: 6 (lower is better)
Translates to: PSNNLAAGVQIH*ALRFPDDITRG
Trigger: TCCCCGAGTGATGTCATCCGGAAACCTCAAGGCCAAGTGGATCTGAACTCCCGCTGCCAAATTGTTCGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329153.10
ENST00000557971.5
ENST00000558386.5
ENST00000558981.5
CDS CAA 72 bp GATAGGAAACCTCCCTGCCACTATCTCTCTACTGGTTaGAGAGGCAAGGAGCAGCCGTTCTCGGTCCGTCTC +
Preference number: 6 (lower is better)
Translates to: DRKPPCHYLSTG*RGKEQPFSVRL
Trigger: GAGACGGACCGAGAACGGCTGCTCCTTGCCTCTCAAACCAGTAGAGAGATAGTGGCAGGGAGGTTTCCTATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329153.10
ENST00000557971.5
ENST00000558366.5
ENST00000558386.5
ENST00000559981.1
ENST00000561370.5
CDS CAA 72 bp ATAGACAAGGCTGCTTGTGACAGGAGACCCTTGGCCTaGGGGCTCTGGCCACCTACTAACCATCTCAAAGGC +
Preference number: 6 (lower is better)
Translates to: IDKAACDRRPLA*GLWPPTNHLKG
Trigger: GCCTTTGAGATGGTTAGTAGGTGGCCAGAGCCCCAAGGCCAAGGGTCTCCTGTCACAAGCAGCCTTGTCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559766.1
CDS CAA 72 bp CAGGAAATAGACAAGGCTGCTTGTGACAGGAGACCCTaGGCCTTGGGGCTCTGGCCACCTACTAACCATCTC +
Preference number: 6 (lower is better)
Translates to: QEIDKAACDRRP*ALGLWPPTNHL
Trigger: GAGATGGTTAGTAGGTGGCCAGAGCCCCAAGGCCAAGGGTCTCCTGTCACAAGCAGCCTTGTCTATTTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559766.1
CDS CAA 72 bp GCCCTCAGACTTTCCGGGGTGCAGCTCCTTCATGGCTaGTTCCCACTTGGAGATGGCATCACAGATCTTGAC +
Preference number: 6 (lower is better)
Translates to: ALRLSGVQLLHG*FPLGDGITDLD
Trigger: GTCAAGATCTGTGATGCCATCTCCAAGTGGGAACAAGCCATGAAGGAGCTGCACCCCGGAAAGTCTGAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561370.5
CDS CAA 90 bp ATGCAGGAAATAGACAAGGCTGCTTGTGACAGGAGACCCTTGGCCTaGGGGCTCTGGCCACCTACTAACCATCTCAAAGGCAGAGGCGAT +
Preference number: 6 (lower is better)
Translates to: MQEIDKAACDRRPLA*GLWPPTNHLKGRGD
Trigger: ATCGCCTCTGCCTTTGAGATGGTTAGTAGGTGGCCAGAGCCCCAAGGCCAAGGGTCTCCTGTCACAAGCAGCCTTGTCTATTTCCTGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559766.1
CDS TCA 72 bp CAACCGTCTGGTTCCTCCAGCCTCATAGTCCTCGTCTaGGTCACAGGATCGATCTACTTCCTCTATGTGCGC +
Preference number: 6 (lower is better)
Translates to: QPSGSSSLIVLV*VTGSIYFLYVR
Trigger: GCGCACATAGAGGAAGTAGATCGATCCTGTGACTCAGACGAGGACTATGAGGCTGGAGGAACCAGACGGTTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329153.10
ENST00000557971.5
ENST00000558386.5
CDS TCA 72 bp AGGAGCAGCCGTTCTCGGTCCGTCTCCCCTTTGACTTaGCTGCGAAAGTACAGCCTGTTCTTGTACATCAGC +
Preference number: 6 (lower is better)
Translates to: RSSRSRSVSPLT*LRKYSLFLYIS
Trigger: GCTGATGTACAAGAACAGGCTGTACTTTCGCAGTCAAGTCAAAGGGGAGACGGACCGAGAACGGCTGCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329153.10
ENST00000557971.5
ENST00000558366.5
ENST00000558386.5
ENST00000560100.1
CDS TCA 72 bp AGGCAAGGAGCAGCCGTTCTCGGTCCGTCTCCCCTTTaGCTTGACTGCGAAAGTACAGCCTGTTCTTGTACA +
Preference number: 6 (lower is better)
Translates to: RQGAAVLGPSPL*LDCESTACSCT
Trigger: TGTACAAGAACAGGCTGTACTTTCGCAGTCAAGTCAAAGGGGAGACGGACCGAGAACGGCTGCTCCTTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329153.10
ENST00000557971.5
ENST00000558366.5
ENST00000558386.5
ENST00000560100.1
CDS TCA 72 bp AGGCAAGGAGCAGCCGTTCTCGGTCCGTCTCCCCTTTaGCTTGACTGCGAAAGTACAGCCTACAAAGAAGAG +
Preference number: 6 (lower is better)
Translates to: RQGAAVLGPSPL*LDCESTAYKEE
Trigger: CTCTTCTTTGTAGGCTGTACTTTCGCAGTCAAGTCAAAGGGGAGACGGACCGAGAACGGCTGCTCCTTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559981.1
CDS GCA 72 bp TTGACTGCGAAAGTACAGCCCTCAGACTTTCCGGGGTaGAGCTCCTTCATGGCTTGTTCCCACTTGGAGATG +
Preference number: 6 (lower is better)
Translates to: LTAKVQPSDFPG*SSFMACSHLEM
Trigger: CATCTCCAAGTGGGAACAAGCCATGAAGGAGCTGCACCCCGGAAAGTCTGAGGGCTGTACTTTCGCAGTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561370.5
CDS GCA 72 bp CAGTATTACTTCTGGGAGACATATCTGAGAGCCGCATaGCCGATGTGGCCACAGCATAGATCCGGCTCTCCT +
Preference number: 6 (lower is better)
Translates to: QYYFWETYLRAA*PMWPQHRSGSP
Trigger: AGGAGAGCCGGATCTATGCTGTGGCCACATCGGGCATGCGGCTCTCAGATATGTCTCCCAGAAGTAATACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558386.5
CDS CCA 72 bp AGAAGATTTTCCCAACAAGAGCGCACCAGACCACCTTaGAGTGGCCATGCTTTACCTTGGTCAGCCAGCCCT +
Preference number: 6 (lower is better)
Translates to: RRFSQQERTRPP*SGHALPWSASP
Trigger: AGGGCTGGCTGACCAAGGTAAAGCATGGCCACTCCAAGGTGGTCTGGTGCGCTCTTGTTGGGAAAATCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329153.10
ENST00000557971.5
ENST00000558386.5
ENST00000558981.5
CDS CCA 72 bp TCTCCTGGTTCAGCCGCTGGAGGAACTCATCAACCGTaGAAGAGCCGTCAAAACCAACCACATGGTAAGTCC +
Preference number: 6 (lower is better)
Translates to: SPGSAAGGTHQP*KSRQNQPHGKS
Trigger: GGACTTACCATGTGGTTGGTTTTGACGGCTCTTCCACGGTTGATGAGTTCCTCCAGCGGCTGAACCAGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329153.10
ENST00000557971.5
ENST00000558296.1
ENST00000558386.5
ENST00000561370.5
CDS CCA 72 bp AAGCCAGAGTGGGATGGCTTTCTCATGCCTATCTCCTaGTTCAGCCGCTGGAGGAACTCATCAACCGTGGAA +
Preference number: 6 (lower is better)
Translates to: KPEWDGFLMPIS*FSRWRNSSTVE
Trigger: TTCCACGGTTGATGAGTTCCTCCAGCGGCTGAACCAGGAGATAGGCATGAGAAAGCCATCCCACTCTGGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329153.10
ENST00000557971.5
ENST00000558296.1
ENST00000558386.5
ENST00000560100.1
ENST00000561370.5
CDS CCA 72 bp ATGTCCCTAGAACCCATGCTGCCACAGCACACTGGATaGAAAGCTCTGTGCTACAGAATAGAGGCCAGCCCT +
Preference number: 6 (lower is better)
Translates to: MSLEPMLPQHTG*KALCYRIEASP
Trigger: AGGGCTGGCCTCTATTCTGTAGCACAGAGCTTTCCATCCAGTGTGCTGTGGCAGCATGGGTTCTAGGGACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559766.1
CDS CCA 72 bp GCAATCCACACCAGAGCGTTCTCCTTGGAAGACAGCTaGGCAGGCTGGGGAAACAGAAACAACCCATCAGAT +
Preference number: 6 (lower is better)
Translates to: AIHTRAFSLEDS*AGWGNRNNPSD
Trigger: ATCTGATGGGTTGTTTCTGTTTCCCCAGCCTGCCCAGCTGTCTTCCAAGGAGAACGCTCTGGTGTGGATTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559766.1
CDS CCA 72 bp TACAGCCCTCAGACTTTCCGGGGTGCAGCTCCTTCATaGCTTGTTCCCACTTGGAGATGGCATCACAGATCT +
Preference number: 6 (lower is better)
Translates to: YSPQTFRGAAPS*LVPTWRWHHRS
Trigger: AGATCTGTGATGCCATCTCCAAGTGGGAACAAGCCATGAAGGAGCTGCACCCCGGAAAGTCTGAGGGCTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561370.5
CDS CCA 72 bp TTCTGGGAGACATATCTGAGAGCCGCATGCCCGATGTaGCCACAGCATAGATCCGGCTCTCCTGAAACAAGA +
Preference number: 6 (lower is better)
Translates to: FWETYLRAACPM*PQHRSGSPETR
Trigger: TCTTGTTTCAGGAGAGCCGGATCTATGCTGTGGCCACATCGGGCATGCGGCTCTCAGATATGTCTCCCAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558386.5
CDS CAA 72 bp TTTCCGGGGTGCAGCTCCTTCATGGCTTGTTCCCACTaGGAGATGGCATCACAGATCTTGACACTTCCCTGC +
Preference number: 6 (lower is better)
Translates to: FPGCSSFMACSH*EMASQILTLPC
Trigger: GCAGGGAAGTGTCAAGATCTGTGATGCCATCTCCAAGTGGGAACAAGCCATGAAGGAGCTGCACCCCGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329153.10
ENST00000557971.5
ENST00000558386.5
ENST00000560100.1
ENST00000561370.5
CDS CAA 72 bp ACCCTCAGACTTTCCGGGGTGCAGCTCCTTCATGGCTaGTTCCCACTTGGAGATGGCATCACAGATCTTGAC +
Preference number: 6 (lower is better)
Translates to: TLRLSGVQLLHG*FPLGDGITDLD
Trigger: GTCAAGATCTGTGATGCCATCTCCAAGTGGGAACAAGCCATGAAGGAGCTGCACCCCGGAAAGTCTGAGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329153.10
ENST00000557971.5
ENST00000558386.5
ENST00000560100.1
CDS CAA 72 bp TCCTCATTCACAGCAATCCACACCAGAGCGTTCTCCTaGGAAGACAGCTGGGCAGGCTGGGGAAACAGAAAC +
Preference number: 6 (lower is better)
Translates to: SSFTAIHTRAFS*EDSWAGWGNRN
Trigger: GTTTCTGTTTCCCCAGCCTGCCCAGCTGTCTTCCAAGGAGAACGCTCTGGTGTGGATTGCTGTGAATGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559766.1
CDS CAA 90 bp TTCCTTGTTGATAGGAAACCTCCCTGCCACTATCTCTCTACTGGTTaGAGAGGCAAGGAGCAGCCGTTCTCGGTCCGTCTCCCCTTTGAC +
Preference number: 6 (lower is better)
Translates to: FLVDRKPPCHYLSTG*RGKEQPFSVRLPFD
Trigger: GTCAAAGGGGAGACGGACCGAGAACGGCTGCTCCTTGCCTCTCAAACCAGTAGAGAGATAGTGGCAGGGAGGTTTCCTATCAACAAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329153.10
ENST00000557971.5
ENST00000558366.5
ENST00000558386.5
ENST00000559981.1
ENST00000561370.5
CDS CAA 90 bp GCGTGTCCCACCCTCAGACTTTCCGGGGTGCAGCTCCTTCATGGCTaGTTCCCACTTGGAGATGGCATCACAGATCTTGAAAAGGCAAAA +
Preference number: 6 (lower is better)
Translates to: ACPTLRLSGVQLLHG*FPLGDGITDLEKAK
Trigger: TTTTGCCTTTTCAAGATCTGTGATGCCATCTCCAAGTGGGAACAAGCCATGAAGGAGCTGCACCCCGGAAAGTCTGAGGGTGGGACACGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558366.5
CDS CAA 90 bp CAGTGTATGCAGGAAATAGACAAGGCTGCTTGTGACAGGAGACCCTaGGCCTTGGGGCTCTGGCCACCTACTAACCATCTCAAAGGCAGA +
Preference number: 6 (lower is better)
Translates to: QCMQEIDKAACDRRP*ALGLWPPTNHLKGR
Trigger: TCTGCCTTTGAGATGGTTAGTAGGTGGCCAGAGCCCCAAGGCCAAGGGTCTCCTGTCACAAGCAGCCTTGTCTATTTCCTGCATACACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559766.1
CDS CAA 90 bp GAAAGTACAGCCCTCAGACTTTCCGGGGTGCAGCTCCTTCATGGCTaGTTCCCACTTGGAGATGGCATCACAGATCTTGACACTTCCCTG +
Preference number: 6 (lower is better)
Translates to: ESTALRLSGVQLLHG*FPLGDGITDLDTSL
Trigger: CAGGGAAGTGTCAAGATCTGTGATGCCATCTCCAAGTGGGAACAAGCCATGAAGGAGCTGCACCCCGGAAAGTCTGAGGGCTGTACTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561370.5
CDS TCA 72 bp AGCGCAGCATGCAGTATTACTTCTGGGAGACATATCTaGGAGCCGCATGCCCGATGTGGCCACAGCATAGAT +
Preference number: 6 (lower is better)
Translates to: SAACSITSGRHI*EPHARCGHSID
Trigger: ATCTATGCTGTGGCCACATCGGGCATGCGGCTCTCAGATATGTCTCCCAGAAGTAATACTGCATGCTGCGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329153.10
ENST00000558386.5
CDS CCA 72 bp TTGGATAGTTTTACCTTCTCTTCCATGACACCCACCTaGGTCTCAGCGTTCTCTGCTCTCTGCTCTGCCTCC +
Preference number: 6 (lower is better)
Translates to: LDSFTFSSMTPT*VSAFSALCSAS
Trigger: GGAGGCAGAGCAGAGAGCAGAGAACGCTGAGACCCAGGTGGGTGTCATGGAAGAGAAGGTAAAACTATCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS CCA 72 bp GATGGCTTTCTCATGCCTATCTCCTGGTTCAGCCGCTaGAGGAACTCATCAACCGTGGAAGAGCCGTCAAAA +
Preference number: 6 (lower is better)
Translates to: DGFLMPISWFSR*RNSSTVEEPSK
Trigger: TTTTGACGGCTCTTCCACGGTTGATGAGTTCCTCCAGCGGCTGAACCAGGAGATAGGCATGAGAAAGCCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329153.10
ENST00000557971.5
ENST00000558296.1
ENST00000558386.5
ENST00000560100.1
ENST00000561370.5
CDS CCA 72 bp CCAAATGAGCTACCAAACAGTCAGACACCCATCAGATaGGCTCTTTCCCCACCACCAATATCCCTGAGCAGG +
Preference number: 6 (lower is better)
Translates to: PNELPNSQTPIR*ALSPPPISLSR
Trigger: CCTGCTCAGGGATATTGGTGGTGGGGAAAGAGCCCATCTGATGGGTGTCTGACTGTTTGGTAGCTCATTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558296.1
CDS CAA 72 bp AAGGAGCAGCCGTTCTCGGTCCGTCTCCCCTTTGACTaGACTGCGAAAGTACAGCCTGTTCTTGTACATCAG +
Preference number: 6 (lower is better)
Translates to: KEQPFSVRLPFD*TAKVQPVLVHQ
Trigger: CTGATGTACAAGAACAGGCTGTACTTTCGCAGTCAAGTCAAAGGGGAGACGGACCGAGAACGGCTGCTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329153.10
ENST00000557971.5
ENST00000558366.5
ENST00000558386.5
ENST00000560100.1
CDS CAA 72 bp ACCCTCAGACTTTCCGGGGTGCAGCTCCTTCATGGCTaGTTCCCACTTGGAGATGGCATCACAGATCTTGAA +
Preference number: 6 (lower is better)
Translates to: TLRLSGVQLLHG*FPLGDGITDLE
Trigger: TTCAAGATCTGTGATGCCATCTCCAAGTGGGAACAAGCCATGAAGGAGCTGCACCCCGGAAAGTCTGAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558366.5
CDS TCA 72 bp AATCTGGATCTCCTTCACCATCCATCAGTTTTCCAATaGGCTGCTCATAGGCAGTGCCCACCTTGGCACTGC +
Preference number: 6 (lower is better)
Translates to: NLDLLHHPSVFQ*AAHRQCPPWHC
Trigger: GCAGTGCCAAGGTGGGCACTGCCTATGAGCAGCTCATTGGAAAACTGATGGATGGTGAAGGAGATCCAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329153.10
ENST00000557971.5
ENST00000558386.5
CDS CCA 72 bp TTTGATGTCCCTAGAACCCATGCTGCCACAGCACACTaGATGGAAAGCTCTGTGCTACAGAATAGAGGCCAG +
Preference number: 6 (lower is better)
Translates to: FDVPRTHAATAH*MESSVLQNRGQ
Trigger: CTGGCCTCTATTCTGTAGCACAGAGCTTTCCATCCAGTGTGCTGTGGCAGCATGGGTTCTAGGGACATCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559766.1
CDS CAA 72 bp GAGCTCATCTTTGCCCTTTATGGCTTTCAGCAATTCTaGGTATTTCCGGTGCAGGCTCCCCTCAGAGTCCAC +
Preference number: 6 (lower is better)
Translates to: ELIFALYGFQQF*VFPVQAPLRVH
Trigger: GTGGACTCTGAGGGGAGCCTGCACCGGAAATACCAAGAATTGCTGAAAGCCATAAAGGGCAAAGATGAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS CAA 72 bp AACAATTTGGCAGCGGGAGTTCAGATCCACTTGGCCTaGAGGTTTCCGGATGACATCACTCGGGGACTTGTA +
Preference number: 6 (lower is better)
Translates to: NNLAAGVQIHLA*RFPDDITRGLV
Trigger: TACAAGTCCCCGAGTGATGTCATCCGGAAACCTCAAGGCCAAGTGGATCTGAACTCCCGCTGCCAAATTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329153.10
ENST00000557971.5
ENST00000558386.5
ENST00000558981.5
CDS CAA 72 bp ATACTGGCCAGTTTCACTTCTGGGATCTGCATGGCGTaGGAGCTGCTGCTTGACATACCAGAGGAAGTGATG +
Preference number: 6 (lower is better)
Translates to: ILASFTSGICMA*ELLLDIPEEVM
Trigger: CATCACTTCCTCTGGTATGTCAAGCAGCAGCTCCAACGCCATGCAGATCCCAGAAGTGAAACTGGCCAGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329153.10
ENST00000557971.5
ENST00000558386.5
ENST00000561370.5
CDS CAA 72 bp GCCATCAGGGCAGCCATCTCAAGAGCCAATTCCTTGTaGATAGGAAACCTCCCTGCCACTATCTCTCTACTG +
Preference number: 6 (lower is better)
Translates to: AIRAAISRANSL*IGNLPATISLL
Trigger: CAGTAGAGAGATAGTGGCAGGGAGGTTTCCTATCAACAAGGAATTGGCTCTTGAGATGGCTGCCCTGATGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329153.10
ENST00000557971.5
ENST00000558366.5
ENST00000558386.5
ENST00000559981.1
ENST00000561370.5
CDS CAA 72 bp TGGGCCATCAGGGCAGCCATCTCAAGAGCCAATTCCTaGTTGATAGGAAACCTCCCTGCCACTATCTCTCTA +
Preference number: 6 (lower is better)
Translates to: WAIRAAISRANS*LIGNLPATISL
Trigger: TAGAGAGATAGTGGCAGGGAGGTTTCCTATCAACAAGGAATTGGCTCTTGAGATGGCTGCCCTGATGGCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329153.10
ENST00000557971.5
ENST00000558366.5
ENST00000558386.5
ENST00000559981.1
ENST00000561370.5
CDS CAA 90 bp TGGTATTTCCGGTGCAGGCTCCCCTCAGAGTCCACATTCTTCAGATaGGATAGTTTTACCTTCTCTTCCATGACACCCACCTGGGTCTCA +
Preference number: 6 (lower is better)
Translates to: WYFRCRLPSESTFFR*DSFTFSSMTPTWVS
Trigger: TGAGACCCAGGTGGGTGTCATGGAAGAGAAGGTAAAACTATCCAATCTGAAGAATGTGGACTCTGAGGGGAGCCTGCACCGGAAATACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS CAA 90 bp CTGGCTGATGAGCTCATCTTTGCCCTTTATGGCTTTCAGCAATTCTaGGTATTTCCGGTGCAGGCTCCCCTCAGAGTCCACATTCTTCAG +
Preference number: 6 (lower is better)
Translates to: LADELIFALYGFQQF*VFPVQAPLRVHILQ
Trigger: CTGAAGAATGTGGACTCTGAGGGGAGCCTGCACCGGAAATACCAAGAATTGCTGAAAGCCATAAAGGGCAAAGATGAGCTCATCAGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS CAA 90 bp TTGAGAGGCAAGGAGCAGCCGTTCTCGGTCCGTCTCCCCTTTGACTaGACTGCGAAAGTACAGCCTACAAAGAAGAGAATAAGAAACCAG +
Preference number: 6 (lower is better)
Translates to: LRGKEQPFSVRLPFD*TAKVQPTKKRIRNQ
Trigger: CTGGTTTCTTATTCTCTTCTTTGTAGGCTGTACTTTCGCAGTCAAGTCAAAGGGGAGACGGACCGAGAACGGCTGCTCCTTGCCTCTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559981.1
CDS TCA 72 bp TCTCTGAGCAGTAACCAGACCCTCACCCCAGGAAGCTaGACTACATCTGAAGGTAAGAAGCTTCATGCATGG +
Preference number: 6 (lower is better)
Translates to: SLSSNQTLTPGS*TTSEGKKLHAW
Trigger: CCATGCATGAAGCTTCTTACCTTCAGATGTAGTTCAGCTTCCTGGGGTGAGGGTCTGGTTACTGCTCAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS TCA 72 bp CCAGTGCATGAGGGATGTGAGCTTATCCACTGTAAATaGACTGGGCATACCTGGGTCCCTCCTTTACCAACA +
Preference number: 6 (lower is better)
Translates to: PVHEGCELIHCK*TGHTWVPPLPT
Trigger: TGTTGGTAAAGGAGGGACCCAGGTATGCCCAGTTCATTTACAGTGGATAAGCTCACATCCCTCATGCACTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560100.1
CDS CAA 72 bp AAGGAGCAGCCGTTCTCGGTCCGTCTCCCCTTTGACTaGACTGCGAAAGTACAGCCTACAAAGAAGAGAATA +
Preference number: 6 (lower is better)
Translates to: KEQPFSVRLPFD*TAKVQPTKKRI
Trigger: TATTCTCTTCTTTGTAGGCTGTACTTTCGCAGTCAAGTCAAAGGGGAGACGGACCGAGAACGGCTGCTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559981.1
CDS GCA 72 bp CCCTTTATGGCTTTCAGCAATTCTTGGTATTTCCGGTaGAGGCTCCCCTCAGAGTCCACATTCTTCAGATTG +
Preference number: 6 (lower is better)
Translates to: PFMAFSNSWYFR*RLPSESTFFRL
Trigger: CAATCTGAAGAATGTGGACTCTGAGGGGAGCCTGCACCGGAAATACCAAGAATTGCTGAAAGCCATAAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS CCA 72 bp GGGCATACCTGGGTCCCTCCTTTACCAACAATCTTTTaGAGGCCCTTTCTTATTTCTTGGTCAGCATCTCAG +
Preference number: 6 (lower is better)
Translates to: GHTWVPPLPTIF*RPFLISWSASQ
Trigger: CTGAGATGCTGACCAAGAAATAAGAAAGGGCCTCCAAAAGATTGTTGGTAAAGGAGGGACCCAGGTATGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560100.1
CDS CCA 72 bp GTATTAATAGTTATGGTGCTTCGATACCAAGGGTACTaGACACCTATAGAAGGAGGAGGTAGGGGCCAGGCA +
Preference number: 6 (lower is better)
Translates to: VLIVMVLRYQGY*TPIEGGGRGQA
Trigger: TGCCTGGCCCCTACCTCCTCCTTCTATAGGTGTCCAGTACCCTTGGTATCGAAGCACCATAACTATTAATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558981.5
CDS CAA 90 bp AGGGGACTGGATGAGGTAAGAGTCCAAGAGACTACTGGAAACTATTaGCCTGGAGACATACTGAGATGGAGGGATGGGATTTTCTTACTC +
Preference number: 6 (lower is better)
Translates to: RGLDEVRVQETTGNY*PGDILRWRDGIFLL
Trigger: GAGTAAGAAAATCCCATCCCTCCATCTCAGTATGTCTCCAGGCAAATAGTTTCCAGTAGTCTCTTGGACTCTTACCTCATCCAGTCCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559981.1
CDS TCA 72 bp CATTCTTCAGATTGGATAGTTTTACCTTCTCTTCCATaGCACCCACCTGGGTCTCAGCGTTCTCTGCTCTCT +
Preference number: 6 (lower is better)
Translates to: HSSDWIVLPSLP*HPPGSQRSLLS
Trigger: AGAGAGCAGAGAACGCTGAGACCCAGGTGGGTGTCATGGAAGAGAAGGTAAAACTATCCAATCTGAAGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS CAA 90 bp TGCCAACTTGAGTGTCACCCATTCCTTGATCTTTGCAGCTTTTTCTaGAACAGTTTTTGCTTCCTCTGCCCTCATCTGCTTCTGCTTCTC +
Preference number: 6 (lower is better)
Translates to: CQLECHPFLDLCSFF*NSFCFLCPHLLLLL
Trigger: GAGAAGCAGAAGCAGATGAGGGCAGAGGAAGCAAAAACTGTTCAAGAAAAAGCTGCAAAGATCAAGGAATGGGTGACACTCAAGTTGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000329153.10
CDS CCA 72 bp GGTAAGAGTCCAAGAGACTACTGGAAACTATTTGCCTaGAGACATACTGAGATGGAGGGATGGGATTTTCTT +
Preference number: 6 (lower is better)
Translates to: GKSPRDYWKLFA*RHTEMEGWDFL
Trigger: AAGAAAATCCCATCCCTCCATCTCAGTATGTCTCCAGGCAAATAGTTTCCAGTAGTCTCTTGGACTCTTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559981.1
CDS CCA 72 bp CTCAGCAGGGATTCCAAACAGGGATGGGGCTTTCTCTaGGTCTGTTACCTTTATTTCCAAAAAGATAAAGTA +
Preference number: 6 (lower is better)
Translates to: LSRDSKQGWGFL*VCYLYFQKDKV
Trigger: TACTTTATCTTTTTGGAAATAAAGGTAACAGACCCAGAGAAAGCCCCATCCCTGTTTGGAATCCCTGCTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559981.1
CDS CAA 90 bp CCTGGAGACATACTGAGATGGAGGGATGGGATTTTCTTACTCAAATaGATAGAAAGTCAGGATGTCTACTTCTGTATTTCCTGGAATTGG +
Preference number: 6 (lower is better)
Translates to: PGDILRWRDGIFLLK*IESQDVYFCISWNW
Trigger: CCAATTCCAGGAAATACAGAAGTAGACATCCTGACTTTCTATCAATTTGAGTAAGAAAATCCCATCCCTCCATCTCAGTATGTCTCCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559981.1
CDS TCA 72 bp ATCAATGATTGCATCTCCATTGGCAAACATTTAAAGTaGCTGACTATCTCAGTGTTGGTGAGAGTATGGGGA +
Preference number: 6 (lower is better)
Translates to: INDCISIGKHLK*LTISVLVRVWG
Trigger: TCCCCATACTCTCACCAACACTGAGATAGTCAGTCACTTTAAATGTTTGCCAATGGAGATGCAATCATTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557971.5
ENST00000558981.5
CDS TCA 72 bp AGCTTTAAAAATGTGTGGGGACGTCGCAACAATCAATaGTTGCATCTCCATTGGCAAACATTTAAAGTGACT +
Preference number: 6 (lower is better)
Translates to: SFKNVWGRRNNQ*LHLHWQTFKVT
Trigger: AGTCACTTTAAATGTTTGCCAATGGAGATGCAATCATTGATTGTTGCGACGTCCCCACACATTTTTAAAGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000557971.5
ENST00000558981.5
CDS CCA 72 bp ACTACTGGAAACTATTTGCCTGGAGACATACTGAGATaGAGGGATGGGATTTTCTTACTCAAATTGATAGAA +
Preference number: 6 (lower is better)
Translates to: TTGNYLPGDILR*RDGIFLLKLIE
Trigger: TTCTATCAATTTGAGTAAGAAAATCCCATCCCTCCATCTCAGTATGTCTCCAGGCAAATAGTTTCCAGTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559981.1
CDS CAA 72 bp ATACTGAGATGGAGGGATGGGATTTTCTTACTCAAATaGATAGAAAGTCAGGATGTCTACTTCTGTATTTCC +
Preference number: 6 (lower is better)
Translates to: ILRWRDGIFLLK*IESQDVYFCIS
Trigger: GGAAATACAGAAGTAGACATCCTGACTTTCTATCAATTTGAGTAAGAAAATCCCATCCCTCCATCTCAGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559981.1
CDS CCA 72 bp TTGATAGAAAGTCAGGATGTCTACTTCTGTATTTCCTaGAATTGGTATAGGAAGTACTTAGTCTTTAGCTAT +
Preference number: 6 (lower is better)
Translates to: LIESQDVYFCIS*NWYRKYLVFSY
Trigger: ATAGCTAAAGACTAAGTACTTCCTATACCAATTCCAGGAAATACAGAAGTAGACATCCTGACTTTCTATCAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559981.1