RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PLA2G4F (Homo sapiens)

Ensembl gene IDs: ENSG00000168907

Ensembl transcript IDs: ENST00000290497.11, ENST00000397272.7, ENST00000561627.5, ENST00000561893.1, ENST00000562320.1, ENST00000565553.1, ENST00000569985.5

Found 787 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCCGCCCACTCTGCACAAGCCCACGTTTGCCTCCTTCACAAGCCTTaGTGGCCTGCGGGGACAGACGCTGGCCTCTGCAACCCTGGGGCT +
Preference number: 1 (lower is better)
Translates to: PAHSAQAHVCLLHKP*WPAGTDAGLCNPGA
Trigger: AGCCCCAGGGTTGCAGAGGCCAGCGTCTGTCCCCGCAGGCCAGCAAGGCTTGTGAAGGAGGCAAACGTGGGCTTGTGCAGAGTGGGCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397272.7
3UTR CCA 90 bp GCGGGAGGTGAATATGTCCAGCACAGCCTGGGAGAAGGGCCCCTGTaGGGTGAGGAGCCTCGTTCGCAGCCTCGAGGGGTTGTGCAGCTG +
Preference number: 1 (lower is better)
Translates to: AGGEYVQHSLGEGPL*GEEPRSQPRGVVQL
Trigger: CAGCTGCACAACCCCTCGAGGCTGCGAACGAGGCTCCTCACCCCACAGGGGCCCTTCTCCCAGGCTGTGCTGGACATATTCACCTCCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
3UTR CCA 90 bp GCCCACTCTGCACAAGCCCACGTTTGCCTCCTTCACAAGCCTTGCTaGCCTGCGGGGACAGACGCTGGCCTCTGCAACCCTGGGGCTGCT +
Preference number: 1 (lower is better)
Translates to: AHSAQAHVCLLHKPC*PAGTDAGLCNPGAA
Trigger: AGCAGCCCCAGGGTTGCAGAGGCCAGCGTCTGTCCCCGCAGGCCAGCAAGGCTTGTGAAGGAGGCAAACGTGGGCTTGTGCAGAGTGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397272.7
3UTR CCA 90 bp GGCCGAGCTCCTGCAACCCTGCCAGGCTGCCGTACAGAGAAGACATaGCTCGGGTTCCACCCCCGGAACCCAACACAGCCACTACAGGCA +
Preference number: 1 (lower is better)
Translates to: GRAPATLPGCRTEKT*LGFHPRNPTQPLQA
Trigger: TGCCTGTAGTGGCTGTGTTGGGTTCCGGGGGTGGAACCCGAGCCATGTCTTCTCTGTACGGCAGCCTGGCAGGGTTGCAGGAGCTCGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
3UTR CCA 90 bp AAGCCTCCGTCCACCAGGTACAGGCAGTCCCGCATGGGGGTGAGCTaGTTGGGGAAGGCGTCCGGGTGTGTGTCTTTCCAGGCCACGAAC +
Preference number: 1 (lower is better)
Translates to: KPPSTRYRQSRMGVS*LGKASGCVSFQATN
Trigger: GTTCGTGGCCTGGAAAGACACACACCCGGACGCCTTCCCCAACCAGCTCACCCCCATGCGGGACTGCCTGTACCTGGTGGACGGAGGCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
3UTR CCA 90 bp CAGGCCCCTGCCCTCTCCCGAGCCTGGTGCCGGTCCAGAGCCAGCTaGAGGGCGCACTTCAAGGTCTCCACGTTGTTCAGGACGTTGTAT +
Preference number: 1 (lower is better)
Translates to: QAPALSRAWCRSRAS*RAHFKVSTLFRTLY
Trigger: ATACAACGTCCTGAACAACGTGGAGACCTTGAAGTGCGCCCTCCAGCTGGCTCTGGACCGGCACCAGGCTCGGGAGAGGGCAGGGGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000562320.1
ENST00000569985.5
3UTR GCA 90 bp GGGAAAGAGGCAAGAGCCCAGGCGAGGCTCCCTCTGCACTGCCCATaGCTTGGAGTAACCCACCTCCAGGAACTTGCACACCCTCCTGCC +
Preference number: 1 (lower is better)
Translates to: GKEARAQARLPLHCP*LGVTHLQELAHPPA
Trigger: GGCAGGAGGGTGTGCAAGTTCCTGGAGGTGGGTTACTCCAAGGCATGGGCAGTGCAGAGGGAGCCTCGCCTGGGCTCTTGCCTCTTTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397272.7
3UTR GCA 90 bp CTTCTGTGTGAGAAGGTCCCCGCCCACTCTGCACAAGCCCACGTTTaGCTCCTTCACAAGCCTTGCTGGCCTGCGGGGACAGACGCTGGC +
Preference number: 1 (lower is better)
Translates to: LLCEKVPAHSAQAHV*LLHKPCWPAGTDAG
Trigger: GCCAGCGTCTGTCCCCGCAGGCCAGCAAGGCTTGTGAAGGAGGCAAACGTGGGCTTGTGCAGAGTGGGCGGGGACCTTCTCACACAGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397272.7
3UTR CCA 90 bp AGAGGCAAGAGCCCAGGCGAGGCTCCCTCTGCACTGCCCATGCCTTaGAGTAACCCACCTCCAGGAACTTGCACACCCTCCTGCCCCACA +
Preference number: 1 (lower is better)
Translates to: RGKSPGEAPSALPMP*SNPPPGTCTPSCPT
Trigger: TGTGGGGCAGGAGGGTGTGCAAGTTCCTGGAGGTGGGTTACTCCAAGGCATGGGCAGTGCAGAGGGAGCCTCGCCTGGGCTCTTGCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397272.7
3UTR TCA 90 bp TGTAGCCGCTCCGTGGACAAAGCTCCCATCTTACTGCTGCAGACGTaGACCTGGGCACGCTCAATGGGGCCCTGCAAGGCCACCTGGGAC +
Preference number: 1 (lower is better)
Translates to: CSRSVDKAPILLLQT*TWARSMGPCKATWD
Trigger: GTCCCAGGTGGCCTTGCAGGGCCCCATTGAGCGTGCCCAGGTTCACGTCTGCAGCAGTAAGATGGGAGCTTTGTCCACGGAGCGGCTACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
3UTR TCA 90 bp GGTCCACTGCTCTCTGAGGCAGCAGAGCCAGTGGGAACGGAGAGTTaGTGGCAAAGCCTCCGTCCACCAGGTACAGGCAGTCCCGCATGG +
Preference number: 1 (lower is better)
Translates to: GPLLSEAAEPVGTES*WQSLRPPGTGSPAW
Trigger: CCATGCGGGACTGCCTGTACCTGGTGGACGGAGGCTTTGCCATCAACTCTCCGTTCCCACTGGCTCTGCTGCCTCAGAGAGCAGTGGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
3UTR TCA 90 bp GACAGCTGGCTTCTCAGTGCCCTCAGCCCCTGTTCTGTGTGGGTCTaGGGACTTGGGCCCTCTGAGGTCCTTCTGTGTCTGGGGTGGGCT +
Preference number: 1 (lower is better)
Translates to: DSWLLSALSPCSVWV*GLGPSEVLLCLGWA
Trigger: AGCCCACCCCAGACACAGAAGGACCTCAGAGGGCCCAAGTCCTCAGACCCACACAGAACAGGGGCTGAGGGCACTGAGAAGCCAGCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
3UTR GCA 90 bp AGGTCACAGTGTCTAGAAGGCCGAGCTCCTGCAACCCTGCCAGGCTaGCGTACAGAGAAGACATGGCTCGGGTTCCACCCCCGGAACCCA +
Preference number: 1 (lower is better)
Translates to: RSQCLEGRAPATLPG*RTEKTWLGFHPRNP
Trigger: TGGGTTCCGGGGGTGGAACCCGAGCCATGTCTTCTCTGTACGGCAGCCTGGCAGGGTTGCAGGAGCTCGGCCTTCTAGACACTGTGACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
3UTR GCA 90 bp CCCTCTGCACTGCCCATGCCTTGGAGTAACCCACCTCCAGGAACTTaGACACCCTCCTGCCCCACATACAGGTGCACACCTCTCCCCCGA +
Preference number: 1 (lower is better)
Translates to: PSALPMPWSNPPPGT*TPSCPTYRCTPLPR
Trigger: TCGGGGGAGAGGTGTGCACCTGTATGTGGGGCAGGAGGGTGTGCAAGTTCCTGGAGGTGGGTTACTCCAAGGCATGGGCAGTGCAGAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397272.7
3UTR CCA 90 bp TCCATCAGCTCCACGTGTAGCCTGGAGCTCAGCACTGGGTTCACGTaGAAGGTAAAGGTGGGTGGGAGGCCTGGCTCTGTGGGAGGCTGC +
Preference number: 1 (lower is better)
Translates to: SISSTCSLELSTGFT*KVKVGGRPGSVGGC
Trigger: GCAGCCTCCCACAGAGCCAGGCCTCCCACCCACCTTTACCTTCCACGTGAACCCAGTGCTGAGCTCCAGGCTACACGTGGAGCTGATGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290497.11
3UTR CCA 90 bp CTGTGTGGGTCTGAGGACTTGGGCCCTCTGAGGTCCTTCTGTGTCTaGGGTGGGCTCTGTGGCTCACCTGATTCTCTCCACACCCCGCTG +
Preference number: 1 (lower is better)
Translates to: LCGSEDLGPLRSFCV*GGLCGSPDSLHTPL
Trigger: CAGCGGGGTGTGGAGAGAATCAGGTGAGCCACAGAGCCCACCCCAGACACAGAAGGACCTCAGAGGGCCCAAGTCCTCAGACCCACACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
3UTR CCA 90 bp ACTGGAGGCATATGCTGCAGAGGCCGTGGCCAGATGGAGAGGGCCTaGCCAGAACGGGATCTCCTCTTCACGAATCTGAGGGCTGCCCAC +
Preference number: 1 (lower is better)
Translates to: TGGICCRGRGQMERA*PERDLLFTNLRAAH
Trigger: GTGGGCAGCCCTCAGATTCGTGAAGAGGAGATCCCGTTCTGGCCAGGCCCTCTCCATCTGGCCACGGCCTCTGCAGCATATGCCTCCAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397272.7
3UTR CCA 90 bp CTCGGGGTCACTGCAGTTGGCCACTATCCTAGTCTGGGCAGGGCTTaGGGACGCCGTGGGCAGCCACAGTTGCACATAGCAGTCGGCTTT +
Preference number: 1 (lower is better)
Translates to: LGVTAVGHYPSLGRA*GRRGQPQLHIAVGF
Trigger: AAAGCCGACTGCTATGTGCAACTGTGGCTGCCCACGGCGTCCCCAAGCCCTGCCCAGACTAGGATAGTGGCCAACTGCAGTGACCCCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565553.1
3UTR GCA 90 bp GCATCTGGGAAAGAGGCAAGAGCCCAGGCGAGGCTCCCTCTGCACTaGCCATGCCTTGGAGTAACCCACCTCCAGGAACTTGCACACCCT +
Preference number: 1 (lower is better)
Translates to: ASGKEARAQARLPLH*PCLGVTHLQELAHP
Trigger: AGGGTGTGCAAGTTCCTGGAGGTGGGTTACTCCAAGGCATGGGCAGTGCAGAGGGAGCCTCGCCTGGGCTCTTGCCTCTTTCCCAGATGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397272.7
3UTR CCA 90 bp GCTCCCGGACCCCCAGTTCCTGAGTGTAGTACTGTAGCCGCTCCGTaGACAAAGCTCCCATCTTACTGCTGCAGACGTGAACCTGGGCAC +
Preference number: 1 (lower is better)
Translates to: APGPPVPECSTVAAP*TKLPSYCCRREPGH
Trigger: GTGCCCAGGTTCACGTCTGCAGCAGTAAGATGGGAGCTTTGTCCACGGAGCGGCTACAGTACTACACTCAGGAACTGGGGGTCCGGGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
3UTR TCA 90 bp GGCCACTACACACATCACCAGAGACTGTGGTCCAGGTTCGAAGAGTaGAGCCTGGGTAACTGGCAGGGAGACACGCGCACATCTCCCACC +
Preference number: 1 (lower is better)
Translates to: GHYTHHQRLWSRFEE*SLGNWQGDTRTSPT
Trigger: GGTGGGAGATGTGCGCGTGTCTCCCTGCCAGTTACCCAGGCTTCACTCTTCGAACCTGGACCACAGTCTCTGGTGATGTGTGTAGTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
3UTR GCA 90 bp TGTAGTACTGTAGCCGCTCCGTGGACAAAGCTCCCATCTTACTGCTaGAGACGTGAACCTGGGCACGCTCAATGGGGCCCTGCAAGGCCA +
Preference number: 1 (lower is better)
Translates to: CSTVAAPWTKLPSYC*RREPGHAQWGPARP
Trigger: TGGCCTTGCAGGGCCCCATTGAGCGTGCCCAGGTTCACGTCTGCAGCAGTAAGATGGGAGCTTTGTCCACGGAGCGGCTACAGTACTACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
3UTR GCA 90 bp GAGTGTAGTACTGTAGCCGCTCCGTGGACAAAGCTCCCATCTTACTaGTGCAGACGTGAACCTGGGCACGCTCAATGGGGCCCTGCAAGG +
Preference number: 1 (lower is better)
Translates to: ECSTVAAPWTKLPSY*CRREPGHAQWGPAR
Trigger: CCTTGCAGGGCCCCATTGAGCGTGCCCAGGTTCACGTCTGCAGCAGTAAGATGGGAGCTTTGTCCACGGAGCGGCTACAGTACTACACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
3UTR CCA 90 bp GAGGAGCAGACATTAAACTGGCTGGGTTACCTTCGGCCCCTCCCCTaGCTTCTTGCTCTGCGTGGCTCCCAGATTCAGTCTTGTTGGAGC +
Preference number: 1 (lower is better)
Translates to: EEQTLNWLGYLRPLP*LLALRGSQIQSCWS
Trigger: GCTCCAACAAGACTGAATCTGGGAGCCACGCAGAGCAAGAAGCCAGGGGAGGGGCCGAAGGTAACCCAGCCAGTTTAATGTCTGCTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397272.7
3UTR CCA 90 bp GCCAGGCCAAGACACAGGCTGGGCTCCAGTCACCCTTCCCCAACCTaGAAACCAGAACTAGTCTTCTTTCCAGACTCAGGACAGGTAAGG +
Preference number: 1 (lower is better)
Translates to: ARPRHRLGSSHPSPT*KPELVFFPDSGQVR
Trigger: CCTTACCTGTCCTGAGTCTGGAAAGAAGACTAGTTCTGGTTTCCAGGTTGGGGAAGGGTGACTGGAGCCCAGCCTGTGTCTTGGCCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397272.7
3UTR TCA 90 bp CCCAAACCTTATCTGAGCACAAGTGGCATTGCCTACACTTCTGTGTaGGAAGGTCCCCGCCCACTCTGCACAAGCCCACGTTTGCCTCCT +
Preference number: 1 (lower is better)
Translates to: PKPYLSTSGIAYTSV*EGPRPLCTSPRLPP
Trigger: AGGAGGCAAACGTGGGCTTGTGCAGAGTGGGCGGGGACCTTCTCACACAGAAGTGTAGGCAATGCCACTTGTGCTCAGATAAGGTTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397272.7
3UTR GCA 90 bp AGCGATCTACTGCCCATCTTCTCCAAAAACACACAAGGAGAGCCCTaGCCCAGTCCAAGCTGCAATTCTGCAAGAGCTTTCCGGGGCCTG +
Preference number: 1 (lower is better)
Translates to: SDLLPIFSKNTQGEP*PSPSCNSARAFRGL
Trigger: CAGGCCCCGGAAAGCTCTTGCAGAATTGCAGCTTGGACTGGGGCAGGGCTCTCCTTGTGTGTTTTTGGAGAAGATGGGCAGTAGATCGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
3UTR GCA 90 bp CTGCCCAGCTCAAGTGGCCAAAGTGCAGCCCTGAGAAGCTGGAGCTaGTTGCTTTTATTCAGTGCAGGCACAATGCCAAAAGCCTGGAGC +
Preference number: 1 (lower is better)
Translates to: LPSSSGQSAALRSWS*LLLFSAGTMPKAWS
Trigger: GCTCCAGGCTTTTGGCATTGTGCCTGCACTGAATAAAAGCAAGCAGCTCCAGCTTCTCAGGGCTGCACTTTGGCCACTTGAGCTGGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397272.7
3UTR GCA 90 bp CTGATTCTCTCCACACCCCGCTGTGAAATGAGTGCTGTTCTCTTCTaGCCTACATCCCCAAGAGTCCCTGGAGCGATCTACTGCCCATCT +
Preference number: 1 (lower is better)
Translates to: LILSTPRCEMSAVLF*PTSPRVPGAIYCPS
Trigger: AGATGGGCAGTAGATCGCTCCAGGGACTCTTGGGGATGTAGGGCAGAAGAGAACAGCACTCATTTCACAGCGGGGTGTGGAGAGAATCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
3UTR GCA 90 bp CTTGTCCCAGTCTCCTCCCAAACCTTATCTGAGCACAAGTGGCATTaGCTACACTTCTGTGTGAGAAGGTCCCCGCCCACTCTGCACAAG +
Preference number: 1 (lower is better)
Translates to: LVPVSSQTLSEHKWH*LHFCVRRSPPTLHK
Trigger: CTTGTGCAGAGTGGGCGGGGACCTTCTCACACAGAAGTGTAGGCAATGCCACTTGTGCTCAGATAAGGTTTGGGAGGAGACTGGGACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397272.7
3UTR CCA 90 bp TTCACGAATCTGAGGGCTGCCCACACTAGAGAGGTTCTAGGTATTTaGAGAGTCCCTGGCGGGTCAGGGGAAATGGAGAAGAGGGAGAGT +
Preference number: 1 (lower is better)
Translates to: FTNLRAAHTREVLGI*RVPGGSGEMEKRES
Trigger: ACTCTCCCTCTTCTCCATTTCCCCTGACCCGCCAGGGACTCTCCAAATACCTAGAACCTCTCTAGTGTGGGCAGCCCTCAGATTCGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397272.7
3UTR CCA 90 bp CTTGATCTTGTCCCAGTCTCCTCCCAAACCTTATCTGAGCACAAGTaGCATTGCCTACACTTCTGTGTGAGAAGGTCCCCGCCCACTCTG +
Preference number: 1 (lower is better)
Translates to: LDLVPVSSQTLSEHK*HCLHFCVRRSPPTL
Trigger: CAGAGTGGGCGGGGACCTTCTCACACAGAAGTGTAGGCAATGCCACTTGTGCTCAGATAAGGTTTGGGAGGAGACTGGGACAAGATCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397272.7
3UTR TCA 90 bp TGCAGCTCTTGTGAATCCTGGTGGTTGAGTGGGAAGGTGTGTTTGTaGGGTTGGCCACACTTGAGGCTTCTCAGGTCAAACAGGAGCAGA +
Preference number: 1 (lower is better)
Translates to: CSSCESWWLSGKVCL*GWPHLRLLRSNRSR
Trigger: TCTGCTCCTGTTTGACCTGAGAAGCCTCAAGTGTGGCCAACCTCACAAACACACCTTCCCACTCAACCACCAGGATTCACAAGAGCTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290497.11
3UTR GCA 90 bp TTCTCCTCCAAAGCTATGCAGAGCCTTCCAACCTTTCAGAAGGCCTaGTCCTTTCCCTATAGCTTCTCCCACCACTCTGACCAATCTCCT +
Preference number: 1 (lower is better)
Translates to: FSSKAMQSLPTFQKA*SFPYSFSHHSDQSP
Trigger: AGGAGATTGGTCAGAGTGGTGGGAGAAGCTATAGGGAAAGGAGCAGGCCTTCTGAAAGGTTGGAAGGCTCTGCATAGCTTTGGAGGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397272.7
3UTR GCA 90 bp CCAAAGTGCAGCCCTGAGAAGCTGGAGCTGCTTGCTTTTATTCAGTaGAGGCACAATGCCAAAAGCCTGGAGCAAACACTGGAGGTAATT +
Preference number: 1 (lower is better)
Translates to: PKCSPEKLELLAFIQ*RHNAKSLEQTLEVI
Trigger: AATTACCTCCAGTGTTTGCTCCAGGCTTTTGGCATTGTGCCTGCACTGAATAAAAGCAAGCAGCTCCAGCTTCTCAGGGCTGCACTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397272.7
3UTR TCA 90 bp AGACACACCCATTTAGCTCCTAGGAATGGTGAGACTATATTTGCATaGTGTGGCCACTACACACATCACCAGAGACTGTGGTCCAGGTTC +
Preference number: 1 (lower is better)
Translates to: RHTHLAPRNGETIFA*CGHYTHHQRLWSRF
Trigger: GAACCTGGACCACAGTCTCTGGTGATGTGTGTAGTGGCCACATCATGCAAATATAGTCTCACCATTCCTAGGAGCTAAATGGGTGTGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397272.7
3UTR GCA 90 bp CAGGGTTATAGAACAGCTGTCTTTAGCTATTCTCCTCCAAAGCTATaGAGAGCCTTCCAACCTTTCAGAAGGCCTGCTCCTTTCCCTATA +
Preference number: 1 (lower is better)
Translates to: QGYRTAVFSYSPPKL*RAFQPFRRPAPFPI
Trigger: TATAGGGAAAGGAGCAGGCCTTCTGAAAGGTTGGAAGGCTCTGCATAGCTTTGGAGGAGAATAGCTAAAGACAGCTGTTCTATAACCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397272.7
3UTR-3UTR GCA 90 bp CCCCAGAGGTCGATGAGGGACACGCTGTGGCCACTGCGCTCCCGGACCCCCAGTCATCTCCCCGGAGCGTaGCCTGGATTCTCAGACAGG +
Preference number: 2 (lower is better)
Translates to: PQRSMRDTLWPLRSRTPSHLPGA*PGFSDR
Trigger: CCTGTCTGAGAATCCAGGGCACGCTCCGGGGAGATG...ACTGGGGGTCCGGGAGCGCAGTGGCCACAGCGTGTCCCTCATCGACCTCTGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000290497.11
3UTR-3UTR GCA 90 bp GAGGCCCCAGAGGTCGATGAGGGACACGCTGTGGCCACTGCGCTCCCGGACCCCCTCAATCCCAGCACTTaGTGCAGGGCCTTGGACACG +
Preference number: 2 (lower is better)
Translates to: EAPEVDEGHAVATALPDPLNPST*CRALDT
Trigger: CGTGTCCAAGGCCCTGCAGCAAGTGCTGGGATTGAG...GGGGTCCGGGAGCGCAGTGGCCACAGCGTGTCCCTCATCGACCTCTGGGGCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
3UTR CAA 90 bp CCTCCGTCCACCAGGTACAGGCAGTCCCGCATGGGGGTGAGCTGGTaGGGGAAGGCGTCCGGGTGTGTGTCTTTCCAGGCCACGAACTCC +
Preference number: 2 (lower is better)
Translates to: PPSTRYRQSRMGVSW*GKASGCVSFQATNS
Trigger: GGAGTTCGTGGCCTGGAAAGACACACACCCGGACGCCTTCCCCAACCAGCTCACCCCCATGCGGGACTGCCTGTACCTGGTGGACGGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
3UTR-3UTR GCA 90 bp CCGAGCCTGGTGCCGGTCCAGAGCCAGCTGGAGGGCGCACTTCAAGGTCTCCACGAGCTCCTGCAACCCTaGCAGGCTGCCGTACAGAGA +
Preference number: 2 (lower is better)
Translates to: PSLVPVQSQLEGALQGLHELLQP*QAAVQR
Trigger: TCTCTGTACGGCAGCCTGGCAGGGTTGCAGGAGCTC...GTGGAGACCTTGAAGTGCGCCCTCCAGCTGGCTCTGGACCGGCACCAGGCTCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
3UTR-3UTR CCA 90 bp GCAGTGTGTCTCCTCTCTGTCACAGTCCTCCGCTTCCTGCCTTGGTCAGGCCCCCCTGGGCACGCTCAATaGGGCCCTGCAAGGCCACCT +
Preference number: 2 (lower is better)
Translates to: AVCLLSVTVLRFLPWSGPPGHAQ*GPARPP
Trigger: AGGTGGCCTTGCAGGGCCCCATTGAGCGTGCCCAGG...GGGGCCTGACCAAGGCAGGAAGCGGAGGACTGTGACAGAGAGGAGACACACTGC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
3UTR CAA 90 bp GGCTTCTCAGTGCCCTCAGCCCCTGTTCTGTGTGGGTCTGAGGACTaGGGCCCTCTGAGGTCCTTCTGTGTCTGGGGTGGGCTCTGTGGC +
Preference number: 2 (lower is better)
Translates to: GFSVPSAPVLCGSED*GPLRSFCVWGGLCG
Trigger: GCCACAGAGCCCACCCCAGACACAGAAGGACCTCAGAGGGCCCAAGTCCTCAGACCCACACAGAACAGGGGCTGAGGGCACTGAGAAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
3UTR-3UTR TCA 90 bp CTCCCACCTGGAGCAGCCAGAATGGGACATCACCCCACAGGCTTTAGGGCGCTGCCCAGCTTGCTGGTCTaGGCCTCCAACTCTGCGCTG +
Preference number: 2 (lower is better)
Translates to: LPPGAARMGHHPTGFRALPSLLV*ASNSAL
Trigger: CAGCGCAGAGTTGGAGGCTCAGACCAGCAAGCTGGG...CAGCGCCCTAAAGCCTGTGGGGTGATGTCCCATTCTGGCTGCTCCAGGTGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290497.11
3UTR-3UTR TCA 90 bp CAGATCCTGCACAGAGTCCCCATCGCTCCTCCCTCTACAAGCCCTGACCATGAGGGCCCCAGAGGTCGATaGGGGACACGCTGTGGCCAC +
Preference number: 2 (lower is better)
Translates to: QILHRVPIAPPSTSPDHEGPRGR*GTRCGH
Trigger: GTGGCCACAGCGTGTCCCTCATCGACCTCTGGGGCC...CTCATGGTCAGGGCTTGTAGAGGGAGGAGCGATGGGGACTCTGTGCAGGATCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
3UTR-3UTR GCA 90 bp ACGCGCACATCTCCCACCTGGAGCAGCCAGAATGGGACATCACCCCACAGGCTTCGCTCAATGGGGCCCTaGAAGGCCACCTGGGACCAG +
Preference number: 2 (lower is better)
Translates to: TRTSPTWSSQNGTSPHRLRSMGP*KATWDQ
Trigger: CTGGTCCCAGGTGGCCTTGCAGGGCCCCATTGAGCG...AAGCCTGTGGGGTGATGTCCCATTCTGGCTGCTCCAGGTGGGAGATGTGCGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
3UTR-3UTR GCA 90 bp GGAAGCAGATCCTGCACAGAGTCCCCATCGCTCCTCCCTCTACAAGCCCTGACCCAGTCCTCCGCTTCCTaGCTTGGTCAGGCCCCTGCC +
Preference number: 2 (lower is better)
Translates to: GSRSCTESPSLLPLQALTQSSAS*LGQAPA
Trigger: GGCAGGGGCCTGACCAAGGCAGGAAGCGGAGGACTG...GGTCAGGGCTTGTAGAGGGAGGAGCGATGGGGACTCTGTGCAGGATCTGCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000562320.1
ENST00000569985.5
3UTR-3UTR CCA 90 bp CTCCCACCTGGAGCAGCCAGAATGGGACATCACCCCACAGGCTTTAGGGCGCTGCGGTCCAGAGCCAGCTaGAGGGCGCACTTCAAGGTC +
Preference number: 2 (lower is better)
Translates to: LPPGAARMGHHPTGFRALRSRAS*RAHFKV
Trigger: GACCTTGAAGTGCGCCCTCCAGCTGGCTCTGGACCG...CAGCGCCCTAAAGCCTGTGGGGTGATGTCCCATTCTGGCTGCTCCAGGTGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000562320.1
ENST00000569985.5
3UTR-3UTR CCA 90 bp ACCTTCGGCCCCTCCCCTGGCTTCTTGCTCTGCGTGGCTCCCAGATTCAGTCTTCAAGGGGAGGGGCCGTaGCCTGTGACAGGCAGCCAT +
Preference number: 2 (lower is better)
Translates to: TFGPSPGFLLCVAPRFSLQGEGP*PVTGSH
Trigger: ATGGCTGCCTGTCACAGGCCACGGCCCCTCCCCTTG...AAGACTGAATCTGGGAGCCACGCAGAGCAAGAAGCCAGGGGAGGGGCCGAAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000397272.7
3UTR-3UTR GCA 90 bp ACCTTCGGCCCCTCCCCTGGCTTCTTGCTCTGCGTGGCTCCCAGATTCAGTCTTGGTCCCCGCCCACTCTaGACAAGCCCACGTTTGCCT +
Preference number: 2 (lower is better)
Translates to: TFGPSPGFLLCVAPRFSLGPRPL*TSPRLP
Trigger: AGGCAAACGTGGGCTTGTGCAGAGTGGGCGGGGACC...AAGACTGAATCTGGGAGCCACGCAGAGCAAGAAGCCAGGGGAGGGGCCGAAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397272.7
3UTR-3UTR GCA 90 bp CTCCCACCTGGAGCAGCCAGAATGGGACATCACCCCACAGGCTTTAGGGCGCTGCCTCCCCTGGCTTCTTaGTCTGCGTGGCTCCCAGAT +
Preference number: 2 (lower is better)
Translates to: LPPGAARMGHHPTGFRALPPLAS*SAWLPD
Trigger: ATCTGGGAGCCACGCAGAGCAAGAAGCCAGGGGAGG...CAGCGCCCTAAAGCCTGTGGGGTGATGTCCCATTCTGGCTGCTCCAGGTGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397272.7
3UTR-3UTR TCA 90 bp GGAAGCAGATCCTGCACAGAGTCCCCATCGCTCCTCCCTCTACAAGCCCTGACCGAGGGGTTGTGCAGCTaGGGCTTCTGGCAGTCGTCT +
Preference number: 2 (lower is better)
Translates to: GSRSCTESPSLLPLQALTEGLCS*GFWQSS
Trigger: AGACGACTGCCAGAAGCCTCAGCTGCACAACCCCTC...GGTCAGGGCTTGTAGAGGGAGGAGCGATGGGGACTCTGTGCAGGATCTGCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
3UTR-3UTR TCA 90 bp GAGACACGCGCACATCTCCCACCTGGAGCAGCCAGAATGGGACATCACCCCACAAGGACTTGGGCCCTCTaGGGTCCTTCTGTGTCTGGG +
Preference number: 2 (lower is better)
Translates to: ETRAHLPPGAARMGHHPTRTWAL*GPSVSG
Trigger: CCCAGACACAGAAGGACCTCAGAGGGCCCAAGTCCT...TGTGGGGTGATGTCCCATTCTGGCTGCTCCAGGTGGGAGATGTGCGCGTGTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
3UTR-3UTR GCA 90 bp GAGGCCCCAGAGGTCGATGAGGGACACGCTGTGGCCACTGCGCTCCCGGACCCCAGAACAAATTCCACCTaGAGCTCTTGTGAATCCTGG +
Preference number: 2 (lower is better)
Translates to: EAPEVDEGHAVATALPDPRTNST*SSCESW
Trigger: CCAGGATTCACAAGAGCTGCAGGTGGAATTTGTTCT...GGGGTCCGGGAGCGCAGTGGCCACAGCGTGTCCCTCATCGACCTCTGGGGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290497.11
3UTR-3UTR GCA 90 bp ATCGCTCCTCCCTCTACAAGCCCTGACCATGAGCAGTGTGTCTCCTCTCTGTCAGCGCTGGGGCCACTCTaGACAGCTGCCAGCAGCTCC +
Preference number: 2 (lower is better)
Translates to: IAPPSTSPDHEQCVSSLSALGPL*TAASSS
Trigger: GGAGCTGCTGGCAGCTGTGCAGAGTGGCCCCAGCGC...TGACAGAGAGGAGACACACTGCTCATGGTCAGGGCTTGTAGAGGGAGGAGCGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290497.11
3UTR-3UTR GCA 90 bp ACACAAGGAGAGCCCTGCCCCAGTCCAAGCTGCAATTCTGCAAGAGCTTTCCGGGAGAGGAGAGCAGGATaGCCCCCTCGCCCAGCTTGC +
Preference number: 2 (lower is better)
Translates to: TQGEPCPSPSCNSARAFRERRAG*PPRPAC
Trigger: GCAAGCTGGGCGAGGGGGGCATCCTGCTCTCCTCTC...CCGGAAAGCTCTTGCAGAATTGCAGCTTGGACTGGGGCAGGGCTCTCCTTGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290497.11
3UTR-3UTR GCA 90 bp CTCCCACCTGGAGCAGCCAGAATGGGACATCACCCCACAGGCTTTAGGGCGCTGCTCAATCCCAGCACTTaGTGCAGGGCCTTGGACACG +
Preference number: 2 (lower is better)
Translates to: LPPGAARMGHHPTGFRALLNPST*CRALDT
Trigger: CGTGTCCAAGGCCCTGCAGCAAGTGCTGGGATTGAG...CAGCGCCCTAAAGCCTGTGGGGTGATGTCCCATTCTGGCTGCTCCAGGTGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
3UTR-3UTR GCA 90 bp GGTGCCGGTCCAGAGCCAGCTGGAGGGCGCACTTCAAGGTCTCCACGTTGTTCATGGTGGCAAAGGCGCTaGCCCACATACCTTGCAGGT +
Preference number: 2 (lower is better)
Translates to: GAGPEPAGGRTSRSPRCSWWQRR*PTYLAG
Trigger: ACCTGCAAGGTATGTGGGGCAGCGCCTTTGCCACCA...TGAACAACGTGGAGACCTTGAAGTGCGCCCTCCAGCTGGCTCTGGACCGGCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
3UTR-3UTR GCA 90 bp AAGGTCCCCGCCCACTCTGCACAAGCCCACGTTTGCCTCCTTCACAAGCCTTGCCCACCTCCAGGAACTTaGACACCCTCCTGCCCCACA +
Preference number: 2 (lower is better)
Translates to: KVPAHSAQAHVCLLHKPCPPPGT*TPSCPT
Trigger: TGTGGGGCAGGAGGGTGTGCAAGTTCCTGGAGGTGG...GCAAGGCTTGTGAAGGAGGCAAACGTGGGCTTGTGCAGAGTGGGCGGGGACCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397272.7
3UTR-3UTR GCA 90 bp AGCCCAAATAACTGGCTCCCCCAGCCCTCGCAACTCATGCCAGCTGGAGGGCTGAGGCTCCCTCTGCACTaGCCATGCCTTGGAGTAACC +
Preference number: 2 (lower is better)
Translates to: SPNNWLPQPSQLMPAGGLRLPLH*PCLGVT
Trigger: GGTTACTCCAAGGCATGGGCAGTGCAGAGGGAGCCT...CAGCCCTCCAGCTGGCATGAGTTGCGAGGGCTGGGGGAGCCAGTTATTTGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397272.7
3UTR-3UTR GCA 90 bp CTCCCACCTGGAGCAGCCAGAATGGGACATCACCCCACAGGCTTTAGGGCGCTGGGTCTCAAGTGCTGCTaGAGGCTCCTAGGCAGCTCA +
Preference number: 2 (lower is better)
Translates to: LPPGAARMGHHPTGFRALGLKCC*RLLGSS
Trigger: TGAGCTGCCTAGGAGCCTGCAGCAGCACTTGAGACC...CAGCGCCCTAAAGCCTGTGGGGTGATGTCCCATTCTGGCTGCTCCAGGTGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397272.7
3UTR-3UTR CCA 90 bp GAGACACGCGCACATCTCCCACCTGGAGCAGCCAGAATGGGACATCACCCCACAAGGAGCAGAGAGAGCTaGTCGCTGCCCAGGATGTCC +
Preference number: 2 (lower is better)
Translates to: ETRAHLPPGAARMGHHPTRSRES*SLPRMS
Trigger: GGACATCCTGGGCAGCGACCAGCTCTCTCTGCTCCT...TGTGGGGTGATGTCCCATTCTGGCTGCTCCAGGTGGGAGATGTGCGCGTGTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290497.11
3UTR-3UTR CCA 90 bp ATCGCTCCTCCCTCTACAAGCCCTGACCATGAGCAGTGTGTCTCCTCTCTGTCACGCATGGGGGTGAGCTaGTTGGGGAAGGCGTCCGGG +
Preference number: 2 (lower is better)
Translates to: IAPPSTSPDHEQCVSSLSRMGVS*LGKASG
Trigger: CCCGGACGCCTTCCCCAACCAGCTCACCCCCATGCG...TGACAGAGAGGAGACACACTGCTCATGGTCAGGGCTTGTAGAGGGAGGAGCGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
3UTR-3UTR CCA 90 bp GGAAGCAGATCCTGCACAGAGTCCCCATCGCTCCTCCCTCTACAAGCCCTGACCTTGTCGCTCCACACCTaGGGCCAGGTGTGTGCGGAA +
Preference number: 2 (lower is better)
Translates to: GSRSCTESPSLLPLQALTLSLHT*GQVCAE
Trigger: TTCCGCACACACCTGGCCCCAGGTGTGGAGCGACAA...GGTCAGGGCTTGTAGAGGGAGGAGCGATGGGGACTCTGTGCAGGATCTGCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000562320.1
ENST00000569985.5
3UTR-3UTR GCA 90 bp AATGGGGGAGCGGGGGTCCTCAGCCTTGGCAAACAGATAGCACTCACGGGCCTCCTCCCATCTTACTGCTaGAGACGTGAACCTGGGCAC +
Preference number: 2 (lower is better)
Translates to: NGGAGVLSLGKQIALTGLLPSYC*RREPGH
Trigger: GTGCCCAGGTTCACGTCTGCAGCAGTAAGATGGGAG...GAGGCCCGTGAGTGCTATCTGTTTGCCAAGGCTGAGGACCCCCGCTCCCCCATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
3UTR-3UTR CCA 90 bp GCTGCCGTACAGAGAAGACATGGCTCGGGTTCCACCCCCGGAACCCAACACAGCAGCACTGGGTTCACGTaGAAGGTAAAGGTGGGTGGG +
Preference number: 2 (lower is better)
Translates to: AAVQRRHGSGSTPGTQHSSTGFT*KVKVGG
Trigger: CCCACCCACCTTTACCTTCCACGTGAACCCAGTGCT...GCTGTGTTGGGTTCCGGGGGTGGAACCCGAGCCATGTCTTCTCTGTACGGCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290497.11
3UTR-3UTR CCA 90 bp CAAATAACTGGCTCCCCCAGCCCTCGCAACTCATGCCAGCTGGAGGGCTGCAGAGCACTGCCCATGCCTTaGAGTAACCCACCTCCAGGA +
Preference number: 2 (lower is better)
Translates to: QITGSPSPRNSCQLEGCRALPMP*SNPPPG
Trigger: TCCTGGAGGTGGGTTACTCCAAGGCATGGGCAGTGC...TCTGCAGCCCTCCAGCTGGCATGAGTTGCGAGGGCTGGGGGAGCCAGTTATTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397272.7
3UTR-3UTR TCA 90 bp GACTGTGGTCCAGGTTCGAAGAGTGAAGCCTGGGTAACTGGCAGGGAGACACGCGTGGGAACGGAGAGTTaGTGGCAAAGCCTCCGTCCA +
Preference number: 2 (lower is better)
Translates to: DCGPGSKSEAWVTGRETRVGTES*WQSLRP
Trigger: TGGACGGAGGCTTTGCCATCAACTCTCCGTTCCCAC...GCGTGTCTCCCTGCCAGTTACCCAGGCTTCACTCTTCGAACCTGGACCACAGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
3UTR-3UTR TCA 90 bp GGTGCCGGTCCAGAGCCAGCTGGAGGGCGCACTTCAAGGTCTCCACGTTGTTCACCTGGGGCTCATAGGTaGAGTTCATCATGCCATAGG +
Preference number: 2 (lower is better)
Translates to: GAGPEPAGGRTSRSPRCSPGAHR*SSSCHR
Trigger: CCTATGGCATGATGAACTTCACCTATGAGCCCCAGG...TGAACAACGTGGAGACCTTGAAGTGCGCCCTCCAGCTGGCTCTGGACCGGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000562320.1
ENST00000569985.5
3UTR-3UTR TCA 90 bp GAGACACGCGCACATCTCCCACCTGGAGCAGCCAGAATGGGACATCACCCCACAGGACGTTGTATCGACTaGGGGCCACCAGCCGATAAA +
Preference number: 2 (lower is better)
Translates to: ETRAHLPPGAARMGHHPTGRCID*GPPADK
Trigger: TTTATCGGCTGGTGGCCCTCAGTCGATACAACGTCC...TGTGGGGTGATGTCCCATTCTGGCTGCTCCAGGTGGGAGATGTGCGCGTGTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000562320.1
ENST00000569985.5
3UTR-3UTR GCA 90 bp GGGGTCCTCAGCCTTGGCAAACAGATAGCACTCACGGGCCTCCTCCATGTCCTCAGGCCACGAACTCCCTaGCAGCCACATAGTCCTTGT +
Preference number: 2 (lower is better)
Translates to: GVLSLGKQIALTGLLHVLRPRTP*QPHSPC
Trigger: ACAAGGACTATGTGGCTGGCAGGGAGTTCGTGGCCT...GAGGACATGGAGGAGGCCCGTGAGTGCTATCTGTTTGCCAAGGCTGAGGACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
3UTR-3UTR CCA 90 bp GGACAAAGCTCCCATCTTACTGCTGCAGACGTGAACCTGGGCACGCTCAATGGGCGTACAGAGAAGACATaGCTCGGGTTCCACCCCCGG +
Preference number: 2 (lower is better)
Translates to: GQSSHLTAADVNLGTLNGRTEKT*LGFHPR
Trigger: CCGGGGGTGGAACCCGAGCCATGTCTTCTCTGTACG...CCCATTGAGCGTGCCCAGGTTCACGTCTGCAGCAGTAAGATGGGAGCTTTGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
3UTR-3UTR CCA 90 bp ATCGCTCCTCCCTCTACAAGCCCTGACCATGAGCAGTGTGTCTCCTCTCTGTCAGGCCAAGACACAGGCTaGGCTCCAGTCACCCTTCCC +
Preference number: 2 (lower is better)
Translates to: IAPPSTSPDHEQCVSSLSGQDTG*APVTLP
Trigger: GGGAAGGGTGACTGGAGCCCAGCCTGTGTCTTGGCC...TGACAGAGAGGAGACACACTGCTCATGGTCAGGGCTTGTAGAGGGAGGAGCGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397272.7
3UTR-3UTR GCA 90 bp GAACTCGCACCACTCTGCAAAATCTTCCCCACTCAAGTTGGTGCGGACGTTGACCCCCCTCGCCCAGCTTaGTGGTCTGAGCCTCCAACT +
Preference number: 2 (lower is better)
Translates to: ELAPLCKIFPTQVGADVDPPRPA*WSEPPT
Trigger: AGTTGGAGGCTCAGACCAGCAAGCTGGGCGAGGGGG...GTCAACGTCCGCACCAACTTGAGTGGGGAAGATTTTGCAGAGTGGTGCGAGTTC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000290497.11
3UTR-3UTR GCA 90 bp ACACAAGGAGAGCCCTGCCCCAGTCCAAGCTGCAATTCTGCAAGAGCTTTCCGGGCAACCCTGCCAGGCTaGCGTACAGAGAAGACATGG +
Preference number: 2 (lower is better)
Translates to: TQGEPCPSPSCNSARAFRATLPG*RTEKTW
Trigger: CCATGTCTTCTCTGTACGGCAGCCTGGCAGGGTTGC...CCGGAAAGCTCTTGCAGAATTGCAGCTTGGACTGGGGCAGGGCTCTCCTTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
3UTR-3UTR GCA 90 bp TCTCTTCTGCCCTACATCCCCAAGAGTCCCTGGAGCGATCTACTGCCCATCTTCGAGCTCCTGCAACCCTaGCAGGCTGCCGTACAGAGA +
Preference number: 2 (lower is better)
Translates to: SLLPYIPKSPWSDLLPIFELLQP*QAAVQR
Trigger: TCTCTGTACGGCAGCCTGGCAGGGTTGCAGGAGCTC...GAAGATGGGCAGTAGATCGCTCCAGGGACTCTTGGGGATGTAGGGCAGAAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
3UTR-3UTR CCA 90 bp GGAAGCAGATCCTGCACAGAGTCCCCATCGCTCCTCCCTCTACAAGCCCTGACCACTGTAGCCGCTCCGTaGACAAAGCTCCCATCTTAC +
Preference number: 2 (lower is better)
Translates to: GSRSCTESPSLLPLQALTTVAAP*TKLPSY
Trigger: GTAAGATGGGAGCTTTGTCCACGGAGCGGCTACAGT...GGTCAGGGCTTGTAGAGGGAGGAGCGATGGGGACTCTGTGCAGGATCTGCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
3UTR-3UTR CCA 90 bp ACACAAGGAGAGCCCTGCCCCAGTCCAAGCTGCAATTCTGCAAGAGCTTTCCGGCTGTGTGAGAGAGCATaGAGCAGGGGGTGCAGCCAA +
Preference number: 2 (lower is better)
Translates to: TQGEPCPSPSCNSARAFRLCERA*SRGCSQ
Trigger: TTGGCTGCACCCCCTGCTCCATGCTCTCTCACACAG...CCGGAAAGCTCTTGCAGAATTGCAGCTTGGACTGGGGCAGGGCTCTCCTTGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397272.7
3UTR-3UTR TCA 90 bp GCCACACTTGAGGCTTCTCAGGTCAAACAGGAGCAGAGAGAGCTGGTCGCTGCCCCTTGTCATAGAGGGTaGGCTCCAGGACGTTCTTCA +
Preference number: 2 (lower is better)
Translates to: ATLEASQVKQEQRELVAAPCHRG*APGRSS
Trigger: TGAAGAACGTCCTGGAGCTCACCCTCTATGACAAGG...GGCAGCGACCAGCTCTCTCTGCTCCTGTTTGACCTGAGAAGCCTCAAGTGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000565553.1
3UTR-3UTR TCA 90 bp GGAAGCAGATCCTGCACAGAGTCCCCATCGCTCCTCCCTCTACAAGCCCTGACCGTGAATCCTGGTGGTTaGGTGGGAAGGTGTGTTTGT +
Preference number: 2 (lower is better)
Translates to: GSRSCTESPSLLPLQALTVNPGG*VGRCVC
Trigger: ACAAACACACCTTCCCACTCAACCACCAGGATTCAC...GGTCAGGGCTTGTAGAGGGAGGAGCGATGGGGACTCTGTGCAGGATCTGCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290497.11
3UTR-3UTR TCA 90 bp TGCCTACACTTCTGTGTGAGAAGGTCCCCGCCCACTCTGCACAAGCCCACGTTTCAGCACAGGTGTTCCTaGCAGCGTGTCTGTGTGAGA +
Preference number: 2 (lower is better)
Translates to: CLHFCVRRSPPTLHKPTFQHRCS*QRVCVR
Trigger: TCTCACACAGACACGCTGTCAGGAACACCTGTGCTG...AAACGTGGGCTTGTGCAGAGTGGGCGGGGACCTTCTCACACAGAAGTGTAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397272.7
3UTR-3UTR GCA 90 bp GCCAGCTGGAGGGCGCACTTCAAGGTCTCCACGTTGTTCAGGACGTTGTATCGAGCCTTGGACACGACCTaGTTCCTCCTGTCCAGAAAC +
Preference number: 2 (lower is better)
Translates to: ASWRAHFKVSTLFRTLYRALDTT*FLLSRN
Trigger: GTTTCTGGACAGGAGGAAGCAGGTCGTGTCCAAGGC...TCGATACAACGTCCTGAACAACGTGGAGACCTTGAAGTGCGCCCTCCAGCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
3UTR-3UTR GCA 90 bp ATCGCTCCTCCCTCTACAAGCCCTGACCATGAGCAGTGTGTCTCCTCTCTGTCAAATCCCAGCACTTGCTaGAGGGCCTTGGACACGACC +
Preference number: 2 (lower is better)
Translates to: IAPPSTSPDHEQCVSSLSNPSTC*RALDTT
Trigger: GGTCGTGTCCAAGGCCCTGCAGCAAGTGCTGGGATT...TGACAGAGAGGAGACACACTGCTCATGGTCAGGGCTTGTAGAGGGAGGAGCGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
3UTR-3UTR GCA 90 bp ACACAAGGAGAGCCCTGCCCCAGTCCAAGCTGCAATTCTGCAAGAGCTTTCCGGAAGGGAAGCAGATCCTaGACAGAGTCCCCATCGCTC +
Preference number: 2 (lower is better)
Translates to: TQGEPCPSPSCNSARAFRKGSRS*TESPSL
Trigger: GAGCGATGGGGACTCTGTGCAGGATCTGCTTCCCTT...CCGGAAAGCTCTTGCAGAATTGCAGCTTGGACTGGGGCAGGGCTCTCCTTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
3UTR-3UTR GCA 90 bp CATCCCCTCAGCCCCTCATTGTTCTTGATAGCAGTGCATCCAGGAGCTCGAGGTCAAGGTCTCAAGTGCTaGTGCAGGCTCCTAGGCAGC +
Preference number: 2 (lower is better)
Translates to: HPLSPSLFLIAVHPGARGQGLKC*CRLLGS
Trigger: GCTGCCTAGGAGCCTGCAGCAGCACTTGAGACCTTG...ACCTCGAGCTCCTGGATGCACTGCTATCAAGAACAATGAGGGGCTGAGGGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397272.7
3UTR-3UTR GCA 90 bp CTCCCACCTGGAGCAGCCAGAATGGGACATCACCCCACAGGCTTTAGGGCGCTGGAGCACAAGTGGCATTaGCTACACTTCTGTGTGAGA +
Preference number: 2 (lower is better)
Translates to: LPPGAARMGHHPTGFRALEHKWH*LHFCVR
Trigger: TCTCACACAGAAGTGTAGGCAATGCCACTTGTGCTC...CAGCGCCCTAAAGCCTGTGGGGTGATGTCCCATTCTGGCTGCTCCAGGTGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397272.7
3UTR-3UTR CCA 90 bp AGGGTTCTGACCCTGGCGGACCGCCTCCTGTTGGTCAGACAGCTTGGCAGGGTTTCTTGTGAATCCTGGTaGTTGAGTGGGAAGGTGTGT +
Preference number: 2 (lower is better)
Translates to: RVLTLADRLLLVRQLGRVSCESW*LSGKVC
Trigger: ACACACCTTCCCACTCAACCACCAGGATTCACAAGA...AACCCTGCCAAGCTGTCTGACCAACAGGAGGCGGTCCGCCAGGGTCAGAACCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290497.11
3UTR-3UTR CCA 90 bp ATAGGGGGTGTCTGGCCTGTTGATGACAAAGTCCCCAAAGGCCTTCTCCTCAGCGCTCCACGTGTAGCCTaGAGCTCAGCACTGGGTTCA +
Preference number: 2 (lower is better)
Translates to: IGGVWPVDDKVPKGLLLSAPRVA*SSALGS
Trigger: TGAACCCAGTGCTGAGCTCCAGGCTACACGTGGAGC...GCTGAGGAGAAGGCCTTTGGGGACTTTGTCATCAACAGGCCAGACACCCCCTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290497.11
3UTR-3UTR CCA 90 bp GAACTCGCACCACTCTGCAAAATCTTCCCCACTCAAGTTGGTGCGGACGTTGACGCCACTACAGGCACCTaGCCACTGTCCAGAGCCTCA +
Preference number: 2 (lower is better)
Translates to: ELAPLCKIFPTQVGADVDATTGT*PLSRAS
Trigger: TGAGGCTCTGGACAGTGGCCAGGTGCCTGTAGTGGC...GTCAACGTCCGCACCAACTTGAGTGGGGAAGATTTTGCAGAGTGGTGCGAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
3UTR-3UTR CCA 90 bp CCACACTTGAGGCTTCTCAGGTCAAACAGGAGCAGAGAGAGCTGGTCGCTGCCCCATAGCAGTCGGCTTTaGACACTGCAGGTAGGACAG +
Preference number: 2 (lower is better)
Translates to: PHLRLLRSNRSRESWSLPHSSRL*TLQVGQ
Trigger: CTGTCCTACCTGCAGTGTCCAAAGCCGACTGCTATG...GGGCAGCGACCAGCTCTCTCTGCTCCTGTTTGACCTGAGAAGCCTCAAGTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565553.1
3UTR-3UTR CCA 90 bp CTTGTCATAGAGGGTGAGCTCCAGGACGTTCTTCACAGCACCATGGATCTGGTAGGCTTGGGGACGCCGTaGGCAGCCACAGTTGCACAT +
Preference number: 2 (lower is better)
Translates to: LVIEGELQDVLHSTMDLVGLGTP*AATVAH
Trigger: ATGTGCAACTGTGGCTGCCCACGGCGTCCCCAAGCC...TACCAGATCCATGGTGCTGTGAAGAACGTCCTGGAGCTCACCCTCTATGACAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565553.1
3UTR-3UTR TCA 90 bp ATCGCTCCTCCCTCTACAAGCCCTGACCATGAGCAGTGTGTCTCCTCTCTGTCATCCTCTTCACGAATCTaGGGGCTGCCCACACTAGAG +
Preference number: 2 (lower is better)
Translates to: IAPPSTSPDHEQCVSSLSSSSRI*GLPTLE
Trigger: CTCTAGTGTGGGCAGCCCTCAGATTCGTGAAGAGGA...TGACAGAGAGGAGACACACTGCTCATGGTCAGGGCTTGTAGAGGGAGGAGCGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397272.7
3UTR-3UTR GCA 90 bp ATAGGGGGTGTCTGGCCTGTTGATGACAAAGTCCCCAAAGGCCTTCTCCTCAGCCTGTCCAGAAACTCCTaGTCCCCGTCAGAGAGGTCA +
Preference number: 2 (lower is better)
Translates to: IGGVWPVDDKVPKGLLLSLSRNS*SPSERS
Trigger: TGACCTCTCTGACGGGGAGCAGGAGTTTCTGGACAG...GCTGAGGAGAAGGCCTTTGGGGACTTTGTCATCAACAGGCCAGACACCCCCTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000290497.11
3UTR-3UTR CCA 90 bp AGCAGATCCTGCACAGAGTCCCCATCGCTCCTCCCTCTACAAGCCCTGACCATGAGCTCTTGTGAATCCTaGTGGTTGAGTGGGAAGGTG +
Preference number: 2 (lower is better)
Translates to: SRSCTESPSLLPLQALTMSSCES*WLSGKV
Trigger: CACCTTCCCACTCAACCACCAGGATTCACAAGAGCT...CATGGTCAGGGCTTGTAGAGGGAGGAGCGATGGGGACTCTGTGCAGGATCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290497.11
3UTR-3UTR CCA 90 bp TATTTGCATGATGTGGCCACTACACACATCACCAGAGACTGTGGTCCAGGTTCGCCAGGCACTGCCAGCTaGAGCTGCCTAGAGCCGTAC +
Preference number: 2 (lower is better)
Translates to: YLHDVATTHITRDCGPGSPGTAS*SCLEPY
Trigger: GTACGGCTCTAGGCAGCTCCAGCTGGCAGTGCCTGG...CGAACCTGGACCACAGTCTCTGGTGATGTGTGTAGTGGCCACATCATGCAAATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290497.11
3UTR-3UTR CCA 90 bp ACACAAGGAGAGCCCTGCCCCAGTCCAAGCTGCAATTCTGCAAGAGCTTTCCGGTATTTGGAGAGTCCCTaGCGGGTCAGGGGAAATGGA +
Preference number: 2 (lower is better)
Translates to: TQGEPCPSPSCNSARAFRYLESP*RVRGNG
Trigger: TCCATTTCCCCTGACCCGCCAGGGACTCTCCAAATA...CCGGAAAGCTCTTGCAGAATTGCAGCTTGGACTGGGGCAGGGCTCTCCTTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397272.7
3UTR-3UTR TCA 90 bp CTATATTTGCATGATGTGGCCACTACACACATCACCAGAGACTGTGGTCCAGGTCCTGCCCCCTGCCCTTaGTCTTGTCCCAGTCTCCTC +
Preference number: 2 (lower is better)
Translates to: LYLHDVATTHITRDCGPGPAPCP*SCPSLL
Trigger: GAGGAGACTGGGACAAGATCAAGGGCAGGGGGCAGG...ACCTGGACCACAGTCTCTGGTGATGTGTGTAGTGGCCACATCATGCAAATATAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397272.7
3UTR-3UTR CCA 90 bp ACACAAGGAGAGCCCTGCCCCAGTCCAAGCTGCAATTCTGCAAGAGCTTTCCGGATCCTGGTGGTTGAGTaGGAAGGTGTGTTTGTGAGG +
Preference number: 2 (lower is better)
Translates to: TQGEPCPSPSCNSARAFRILVVE*EGVFVR
Trigger: CCTCACAAACACACCTTCCCACTCAACCACCAGGAT...CCGGAAAGCTCTTGCAGAATTGCAGCTTGGACTGGGGCAGGGCTCTCCTTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290497.11
3UTR-3UTR CCA 90 bp TTCAAGGTCTCCACGTTGTTCAGGACGTTGTATCGACTGAGGGCCACCAGCCGAACTGTAGCCGCTCCGTaGACAAAGCTCCCATCTTAC +
Preference number: 2 (lower is better)
Translates to: FKVSTLFRTLYRLRATSRTVAAP*TKLPSY
Trigger: GTAAGATGGGAGCTTTGTCCACGGAGCGGCTACAGT...TCGGCTGGTGGCCCTCAGTCGATACAACGTCCTGAACAACGTGGAGACCTTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
3UTR-3UTR CCA 90 bp ATCGCTCCTCCCTCTACAAGCCCTGACCATGAGCAGTGTGTCTCCTCTCTGTCACCCATTGGATGCATCTaGGAAAGAGGCAAGAGCCCA +
Preference number: 2 (lower is better)
Translates to: IAPPSTSPDHEQCVSSLSPIGCI*ERGKSP
Trigger: TGGGCTCTTGCCTCTTTCCCAGATGCATCCAATGGG...TGACAGAGAGGAGACACACTGCTCATGGTCAGGGCTTGTAGAGGGAGGAGCGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397272.7
3UTR-3UTR CCA 90 bp TGCCTACACTTCTGTGTGAGAAGGTCCCCGCCCACTCTGCACAAGCCCACGTTTCACCCTTCCCCAACCTaGAAACCAGAACTAGTCTTC +
Preference number: 2 (lower is better)
Translates to: CLHFCVRRSPPTLHKPTFHPSPT*KPELVF
Trigger: GAAGACTAGTTCTGGTTTCCAGGTTGGGGAAGGGTG...AAACGTGGGCTTGTGCAGAGTGGGCGGGGACCTTCTCACACAGAAGTGTAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397272.7
3UTR CAA 90 bp CCCAGCTCAAGTGGCCAAAGTGCAGCCCTGAGAAGCTGGAGCTGCTaGCTTTTATTCAGTGCAGGCACAATGCCAAAAGCCTGGAGCAAA +
Preference number: 2 (lower is better)
Translates to: PSSSGQSAALRSWSC*LLFSAGTMPKAWSK
Trigger: TTTGCTCCAGGCTTTTGGCATTGTGCCTGCACTGAATAAAAGCAAGCAGCTCCAGCTTCTCAGGGCTGCACTTTGGCCACTTGAGCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397272.7
3UTR-3UTR GCA 90 bp CTGGAGGTAATTAACATTTATTGTTCCCCTTTCAGGGAAGGTCATGGGCGTAGATGCCAGCTGGAGGGCTaGAGATCCCAGGCCAGGCCA +
Preference number: 2 (lower is better)
Translates to: LEVINIYCSPFREGHGRRCQLEG*RSQARP
Trigger: TGGCCTGGCCTGGGATCTGCAGCCCTCCAGCTGGCA...TCTACGCCCATGACCTTCCCTGAAAGGGGAACAATAAATGTTAATTACCTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397272.7
3UTR-3UTR CCA 90 bp CTATATTTGCATGATGTGGCCACTACACACATCACCAGAGACTGTGGTCCAGGTGCCACTACAGGCACCTaGCCACTGTCCAGAGCCTCA +
Preference number: 2 (lower is better)
Translates to: LYLHDVATTHITRDCGPGATTGT*PLSRAS
Trigger: TGAGGCTCTGGACAGTGGCCAGGTGCCTGTAGTGGC...ACCTGGACCACAGTCTCTGGTGATGTGTGTAGTGGCCACATCATGCAAATATAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
3UTR-3UTR TCA 90 bp ATTCTCTCCACACCCCGCTGTGAAATGAGTGCTGTTCTCTTCTGCCCTACATCCGAGGTTGGCCACACTTaGGGCTTCTCAGGTCAAACA +
Preference number: 2 (lower is better)
Translates to: ILSTPRCEMSAVLFCPTSEVGHT*GFSGQT
Trigger: TGTTTGACCTGAGAAGCCTCAAGTGTGGCCAACCTC...GGATGTAGGGCAGAAGAGAACAGCACTCATTTCACAGCGGGGTGTGGAGAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290497.11
3UTR-3UTR GCA 90 bp TTGCTTTTATTCAGTGCAGGCACAATGCCAAAAGCCTGGAGCAAACACTGGAGGCCTCTGCACTGCCCATaGCTTGGAGTAACCCACCTC +
Preference number: 2 (lower is better)
Translates to: LLLFSAGTMPKAWSKHWRPLHCP*LGVTHL
Trigger: GAGGTGGGTTACTCCAAGGCATGGGCAGTGCAGAGG...CCTCCAGTGTTTGCTCCAGGCTTTTGGCATTGTGCCTGCACTGAATAAAAGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397272.7
3UTR-3UTR CCA 90 bp TCAAAGCCAAGGCGTAGGTCTAGGTCCCCGGAGCTCATTTCCACCTTCATGCTCTCAGATGCAGGCACCTaGCTCTTCTCCAGAACAAAT +
Preference number: 2 (lower is better)
Translates to: SKPRRRSRSPELISTFMLSDAGT*LFSRTN
Trigger: ATTTGTTCTGGAGAAGAGCCAGGTGCCTGCATCTGA...GAGCATGAAGGTGGAAATGAGCTCCGGGGACCTAGACCTACGCCTTGGCTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290497.11
3UTR-3UTR CCA 90 bp GATCTCCTCTTCACGAATCTGAGGGCTGCCCACACTAGAGAGGTTCTAGGTATTGCGGGTCAGGGGAAATaGAGAAGAGGGAGAGTGAGA +
Preference number: 2 (lower is better)
Translates to: DLLFTNLRAAHTREVLGIAGQGK*RRGRVR
Trigger: TCTCACTCTCCCTCTTCTCCATTTCCCCTGACCCGC...AATACCTAGAACCTCTCTAGTGTGGGCAGCCCTCAGATTCGTGAAGAGGAGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397272.7
3UTR-3UTR CCA 90 bp GCTGTCTTTAGCTATTCTCCTCCAAAGCTATGCAGAGCCTTCCAACCTTTCAGAGCCAGCCCAAATAACTaGCTCCCCCAGCCCTCGCAA +
Preference number: 2 (lower is better)
Translates to: AVFSYSPPKLCRAFQPFRASPNN*LPQPSQ
Trigger: TTGCGAGGGCTGGGGGAGCCAGTTATTTGGGCTGGC...TCTGAAAGGTTGGAAGGCTCTGCATAGCTTTGGAGGAGAATAGCTAAAGACAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397272.7
3UTR-3UTR CCA 90 bp CTATATTTGCATGATGTGGCCACTACACACATCACCAGAGACTGTGGTCCAGGTACTGCCCAGCTCAAGTaGCCAAAGTGCAGCCCTGAG +
Preference number: 2 (lower is better)
Translates to: LYLHDVATTHITRDCGPGTAQLK*PKCSPE
Trigger: CTCAGGGCTGCACTTTGGCCACTTGAGCTGGGCAGT...ACCTGGACCACAGTCTCTGGTGATGTGTGTAGTGGCCACATCATGCAAATATAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397272.7
3UTR-3UTR TCA 90 bp CTGGAGGTAATTAACATTTATTGTTCCCCTTTCAGGGAAGGTCATGGGCGTAGAGCCTACACTTCTGTGTaGGAAGGTCCCCGCCCACTC +
Preference number: 2 (lower is better)
Translates to: LEVINIYCSPFREGHGRRAYTSV*EGPRPL
Trigger: GAGTGGGCGGGGACCTTCTCACACAGAAGTGTAGGC...TCTACGCCCATGACCTTCCCTGAAAGGGGAACAATAAATGTTAATTACCTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397272.7
3UTR-3UTR GCA 90 bp CTATATTTGCATGATGTGGCCACTACACACATCACCAGAGACTGTGGTCCAGGTGAGAGAGCTGGTCGCTaGCCAGGATGTCCTTGTCAT +
Preference number: 2 (lower is better)
Translates to: LYLHDVATTHITRDCGPGERAGR*PGCPCH
Trigger: ATGACAAGGACATCCTGGGCAGCGACCAGCTCTCTC...ACCTGGACCACAGTCTCTGGTGATGTGTGTAGTGGCCACATCATGCAAATATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290497.11
3UTR-3UTR GCA 90 bp GCTGTCTTTAGCTATTCTCCTCCAAAGCTATGCAGAGCCTTCCAACCTTTCAGAACTGGAGGCATATGCTaGAGAGGCCGTGGCCAGATG +
Preference number: 2 (lower is better)
Translates to: AVFSYSPPKLCRAFQPFRTGGIC*RGRGQM
Trigger: CATCTGGCCACGGCCTCTGCAGCATATGCCTCCAGT...TCTGAAAGGTTGGAAGGCTCTGCATAGCTTTGGAGGAGAATAGCTAAAGACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397272.7
3UTR-3UTR CCA 90 bp CTATATTTGCATGATGTGGCCACTACACACATCACCAGAGACTGTGGTCCAGGTTCCTCCCTGTACTTCTaGCCAATATCTGGGCCACAG +
Preference number: 2 (lower is better)
Translates to: LYLHDVATTHITRDCGPGSSLYF*PISGPQ
Trigger: CTGTGGCCCAGATATTGGCCAGAAGTACAGGGAGGA...ACCTGGACCACAGTCTCTGGTGATGTGTGTAGTGGCCACATCATGCAAATATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397272.7
3UTR-3UTR TCA 90 bp GCTGTCTTTAGCTATTCTCCTCCAAAGCTATGCAGAGCCTTCCAACCTTTCAGACTCCACACCCCGCTGTaGAATGAGTGCTGTTCTCTT +
Preference number: 2 (lower is better)
Translates to: AVFSYSPPKLCRAFQPFRLHTPL*NECCSL
Trigger: AAGAGAACAGCACTCATTTCACAGCGGGGTGTGGAG...TCTGAAAGGTTGGAAGGCTCTGCATAGCTTTGGAGGAGAATAGCTAAAGACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397272.7
3UTR-3UTR TCA 90 bp TTGCTTTTATTCAGTGCAGGCACAATGCCAAAAGCCTGGAGCAAACACTGGAGGAACGCTGTGCAGTTCTaGGCTGTGAACCCTATGAAG +
Preference number: 2 (lower is better)
Translates to: LLLFSAGTMPKAWSKHWRNAVQF*AVNPMK
Trigger: CTTCATAGGGTTCACAGCTCAGAACTGCACAGCGTT...CCTCCAGTGTTTGCTCCAGGCTTTTGGCATTGTGCCTGCACTGAATAAAAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397272.7
3UTR-3UTR CCA 90 bp CTGGAGGTAATTAACATTTATTGTTCCCCTTTCAGGGAAGGTCATGGGCGTAGACTTCTGGCCAATATCTaGGCCACAGCACTAGCCCAG +
Preference number: 2 (lower is better)
Translates to: LEVINIYCSPFREGHGRRLLANI*ATALAQ
Trigger: CTGGGCTAGTGCTGTGGCCCAGATATTGGCCAGAAG...TCTACGCCCATGACCTTCCCTGAAAGGGGAACAATAAATGTTAATTACCTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397272.7
3UTR CAA 90 bp GCAGTTCTGAGCTGTGAACCCTATGAAGGTTTTACTAACAAGTTATaGATGACGGCAGGCACAGCAGTGTTGATGACAATGGCCACAGCA +
Preference number: 2 (lower is better)
Translates to: AVLSCEPYEGFTNKL*MTAGTAVLMTMATA
Trigger: TGCTGTGGCCATTGTCATCAACACTGCTGTGCCTGCCGTCATCAATAACTTGTTAGTAAAACCTTCATAGGGTTCACAGCTCAGAACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397272.7
3UTR-3UTR GCA 90 bp TTGCTTTTATTCAGTGCAGGCACAATGCCAAAAGCCTGGAGCAAACACTGGAGGGGATGGATGCATCTCTaGTTTCCATCTCAGTGTAAG +
Preference number: 2 (lower is better)
Translates to: LLLFSAGTMPKAWSKHWRGWMHL*FPSQCK
Trigger: CTTACACTGAGATGGAAAGCAGAGATGCATCCATCC...CCTCCAGTGTTTGCTCCAGGCTTTTGGCATTGTGCCTGCACTGAATAAAAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397272.7
3UTR-3UTR TCA 90 bp CTGGAGGTAATTAACATTTATTGTTCCCCTTTCAGGGAAGGTCATGGGCGTAGAGATAAGGGTTGGGAATaGGGTAAAGACTCAGATCTC +
Preference number: 2 (lower is better)
Translates to: LEVINIYCSPFREGHGRRDKGWE*GKDSDL
Trigger: GAGATCTGAGTCTTTACCTCATTCCCAACCCTTATC...TCTACGCCCATGACCTTCCCTGAAAGGGGAACAATAAATGTTAATTACCTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397272.7
3UTR GCA 72 bp GTCACAGTCCTCCGCTTCCTGCCTTGGTCAGGCCCCTaGCCTCTCCCGAGCCTGGTGCCGGTCCAGAGCCAG +
Preference number: 3 (lower is better)
Translates to: VTVLRFLPWSGP*PLPSLVPVQSQ
Trigger: CTGGCTCTGGACCGGCACCAGGCTCGGGAGAGGGCAGGGGCCTGACCAAGGCAGGAAGCGGAGGACTGTGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000562320.1
ENST00000569985.5
3UTR CCA 72 bp GCCTGGCTCTGTGGGAGGCTGCAGGGGCAAGAGCTGTaGCTTCTCGTAGGCTCCAGGCACTGCCAGCTGGAG +
Preference number: 3 (lower is better)
Translates to: AWLCGRLQGQEL*LLVGSRHCQLE
Trigger: CTCCAGCTGGCAGTGCCTGGAGCCTACGAGAAGCCACAGCTCTTGCCCCTGCAGCCTCCCACAGAGCCAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000561627.5
3UTR CCA 72 bp GCCCTCTCCCGAGCCTGGTGCCGGTCCAGAGCCAGCTaGAGGGCGCACTTCAAGGTCTCCACGTTGTTCAGG +
Preference number: 3 (lower is better)
Translates to: ALSRAWCRSRAS*RAHFKVSTLFR
Trigger: CCTGAACAACGTGGAGACCTTGAAGTGCGCCCTCCAGCTGGCTCTGGACCGGCACCAGGCTCGGGAGAGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000562320.1
ENST00000569985.5
3UTR CCA 72 bp CCGTGGGCAGCCACAGTTGCACATAGCAGTCGGCTTTaGACACTGCAGGTAGGACAGGGAGGGGCCGGGGCC +
Preference number: 3 (lower is better)
Translates to: PWAATVAHSSRL*TLQVGQGGAGA
Trigger: GGCCCCGGCCCCTCCCTGTCCTACCTGCAGTGTCCAAAGCCGACTGCTATGTGCAACTGTGGCTGCCCACGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565553.1
3UTR TCA 72 bp ACAGGAGATACTCAACAAGGAGGCCCCAGAGGTCGATaGGGGACACGCTGTGGCCACTGCGCTCCCGGACCC +
Preference number: 3 (lower is better)
Translates to: TGDTQQGGPRGR*GTRCGHCAPGP
Trigger: GGGTCCGGGAGCGCAGTGGCCACAGCGTGTCCCTCATCGACCTCTGGGGCCTCCTTGTTGAGTATCTCCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
3UTR GCA 72 bp GTAGGTCTAGGTCCCCGGAGCTCATTTCCACCTTCATaGTCAGAGCCACCTCCTGGCCCTCCCCCAGGGCCA +
Preference number: 3 (lower is better)
Translates to: VGLGPRSSFPPS*SEPPPGPPPGP
Trigger: TGGCCCTGGGGGAGGGCCAGGAGGTGGCTCTGAGCATGAAGGTGGAAATGAGCTCCGGGGACCTAGACCTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290497.11
3UTR GCA 72 bp GAGAAGGTCCCCGCCCACTCTGCACAAGCCCACGTTTaGCTCCTTCACAAGCCTTGCTGGCCTGCGGGGACA +
Preference number: 3 (lower is better)
Translates to: EKVPAHSAQAHV*LLHKPCWPAGT
Trigger: TGTCCCCGCAGGCCAGCAAGGCTTGTGAAGGAGGCAAACGTGGGCTTGTGCAGAGTGGGCGGGGACCTTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397272.7
3UTR CCA 72 bp CCTGCAACCCTGCCAGGCTGCCGTACAGAGAAGACATaGCTCGGGTTCCACCCCCGGAACCCAACACAGCCA +
Preference number: 3 (lower is better)
Translates to: PATLPGCRTEKT*LGFHPRNPTQP
Trigger: TGGCTGTGTTGGGTTCCGGGGGTGGAACCCGAGCCATGTCTTCTCTGTACGGCAGCCTGGCAGGGTTGCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
3UTR CCA 72 bp TCCACCAGGTACAGGCAGTCCCGCATGGGGGTGAGCTaGTTGGGGAAGGCGTCCGGGTGTGTGTCTTTCCAG +
Preference number: 3 (lower is better)
Translates to: STRYRQSRMGVS*LGKASGCVSFQ
Trigger: CTGGAAAGACACACACCCGGACGCCTTCCCCAACCAGCTCACCCCCATGCGGGACTGCCTGTACCTGGTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
3UTR CCA 72 bp AGGGCTGCAGATCCCAGGCCAGGCCAAGACACAGGCTaGGCTCCAGTCACCCTTCCCCAACCTGGAAACCAG +
Preference number: 3 (lower is better)
Translates to: RAADPRPGQDTG*APVTLPQPGNQ
Trigger: CTGGTTTCCAGGTTGGGGAAGGGTGACTGGAGCCCAGCCTGTGTCTTGGCCTGGCCTGGGATCTGCAGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397272.7
3UTR CCA 72 bp GCACAAGCCCACGTTTGCCTCCTTCACAAGCCTTGCTaGCCTGCGGGGACAGACGCTGGCCTCTGCAACCCT +
Preference number: 3 (lower is better)
Translates to: AQAHVCLLHKPC*PAGTDAGLCNP
Trigger: AGGGTTGCAGAGGCCAGCGTCTGTCCCCGCAGGCCAGCAAGGCTTGTGAAGGAGGCAAACGTGGGCTTGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397272.7
3UTR-3UTR CAA 90 bp TGGTGCCGGTCCAGAGCCAGCTGGAGGGCGCACTTCAAGGTCTCCACGTTGTTCGCTGCCCCACATACCTaGCAGGTAACAGATCCGGGG +
Preference number: 3 (lower is better)
Translates to: WCRSRASWRAHFKVSTLFAAPHT*QVTDPG
Trigger: CCCCGGATCTGTTACCTGCAAGGTATGTGGGGCAGC...GAACAACGTGGAGACCTTGAAGTGCGCCCTCCAGCTGGCTCTGGACCGGCACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
3UTR TCA 72 bp CCCCTGTTCTGTGTGGGTCTGAGGACTTGGGCCCTCTaGGGTCCTTCTGTGTCTGGGGTGGGCTCTGTGGCT +
Preference number: 3 (lower is better)
Translates to: PLFCVGLRTWAL*GPSVSGVGSVA
Trigger: AGCCACAGAGCCCACCCCAGACACAGAAGGACCTCAGAGGGCCCAAGTCCTCAGACCCACACAGAACAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
3UTR GCA 72 bp TGTCTAGAAGGCCGAGCTCCTGCAACCCTGCCAGGCTaGCGTACAGAGAAGACATGGCTCGGGTTCCACCCC +
Preference number: 3 (lower is better)
Translates to: CLEGRAPATLPG*RTEKTWLGFHP
Trigger: GGGGTGGAACCCGAGCCATGTCTTCTCTGTACGGCAGCCTGGCAGGGTTGCAGGAGCTCGGCCTTCTAGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
3UTR GCA 72 bp GCAAGAGCCCAGGCGAGGCTCCCTCTGCACTGCCCATaGCTTGGAGTAACCCACCTCCAGGAACTTGCACAC +
Preference number: 3 (lower is better)
Translates to: ARAQARLPLHCP*LGVTHLQELAH
Trigger: GTGTGCAAGTTCCTGGAGGTGGGTTACTCCAAGGCATGGGCAGTGCAGAGGGAGCCTCGCCTGGGCTCTTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397272.7
3UTR GCA 72 bp TCTGCACAAGCCCACGTTTGCCTCCTTCACAAGCCTTaGTGGCCTGCGGGGACAGACGCTGGCCTCTGCAAC +
Preference number: 3 (lower is better)
Translates to: SAQAHVCLLHKP*WPAGTDAGLCN
Trigger: GTTGCAGAGGCCAGCGTCTGTCCCCGCAGGCCAGCAAGGCTTGTGAAGGAGGCAAACGTGGGCTTGTGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397272.7
3UTR-3UTR CAA 90 bp AATGGGGGAGCGGGGGTCCTCAGCCTTGGCAAACAGATAGCACTCACGGGCCTCACTCAATCCCAGCACTaGCTGCAGGGCCTTGGACAC +
Preference number: 3 (lower is better)
Translates to: NGGAGVLSLGKQIALTGLTQSQH*LQGLGH
Trigger: GTGTCCAAGGCCCTGCAGCAAGTGCTGGGATTGAGT...GAGGCCCGTGAGTGCTATCTGTTTGCCAAGGCTGAGGACCCCCGCTCCCCCATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
3UTR-3UTR CAA 90 bp GTGGCATTGCCTACACTTCTGTGTGAGAAGGTCCCCGCCCACTCTGCACAAGCCCCTCCTTCACAAGCCTaGCTGGCCTGCGGGGACAGA +
Preference number: 3 (lower is better)
Translates to: VALPTLLCEKVPAHSAQAPPSQA*LACGDR
Trigger: TCTGTCCCCGCAGGCCAGCAAGGCTTGTGAAGGAGG...GGCTTGTGCAGAGTGGGCGGGGACCTTCTCACACAGAAGTGTAGGCAATGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397272.7
3UTR TCA 72 bp TCCGTGGACAAAGCTCCCATCTTACTGCTGCAGACGTaGACCTGGGCACGCTCAATGGGGCCCTGCAAGGCC +
Preference number: 3 (lower is better)
Translates to: SVDKAPILLLQT*TWARSMGPCKA
Trigger: GGCCTTGCAGGGCCCCATTGAGCGTGCCCAGGTTCACGTCTGCAGCAGTAAGATGGGAGCTTTGTCCACGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
3UTR GCA 72 bp GTAGCCGCTCCGTGGACAAAGCTCCCATCTTACTGCTaGAGACGTGAACCTGGGCACGCTCAATGGGGCCCT +
Preference number: 3 (lower is better)
Translates to: VAAPWTKLPSYC*RREPGHAQWGP
Trigger: AGGGCCCCATTGAGCGTGCCCAGGTTCACGTCTGCAGCAGTAAGATGGGAGCTTTGTCCACGGAGCGGCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
3UTR GCA 72 bp CGTCCGGGTGTGTGTCTTTCCAGGCCACGAACTCCCTaGCAGCCACATAGTCCTTGTGCAAGCAGAGACCCC +
Preference number: 3 (lower is better)
Translates to: RPGVCLSRPRTP*QPHSPCASRDP
Trigger: GGGGTCTCTGCTTGCACAAGGACTATGTGGCTGGCAGGGAGTTCGTGGCCTGGAAAGACACACACCCGGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
3UTR GCA 72 bp CTGGCTGGGTTACCTTCGGCCCCTCCCCTGGCTTCTTaGTCTGCGTGGCTCCCAGATTCAGTCTTGTTGGAG +
Preference number: 3 (lower is better)
Translates to: LAGLPSAPPLAS*SAWLPDSVLLE
Trigger: CTCCAACAAGACTGAATCTGGGAGCCACGCAGAGCAAGAAGCCAGGGGAGGGGCCGAAGGTAACCCAGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397272.7
3UTR CCA 72 bp TCCACGTGTAGCCTGGAGCTCAGCACTGGGTTCACGTaGAAGGTAAAGGTGGGTGGGAGGCCTGGCTCTGTG +
Preference number: 3 (lower is better)
Translates to: STCSLELSTGFT*KVKVGGRPGSV
Trigger: CACAGAGCCAGGCCTCCCACCCACCTTTACCTTCCACGTGAACCCAGTGCTGAGCTCCAGGCTACACGTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290497.11
3UTR CCA 72 bp CCGAGCCGGCGGTCTTTAGGAAGATCTCATCCAGGCTaGTGGCAAAGGCGCTGCCCCACATACCTTGCAGGT +
Preference number: 3 (lower is better)
Translates to: PSRRSLGRSHPG*WQRRCPTYLAG
Trigger: ACCTGCAAGGTATGTGGGGCAGCGCCTTTGCCACCAGCCTGGATGAGATCTTCCTAAAGACCGCCGGCTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
3UTR CCA 72 bp GTCCAAGCTGCAATTCTGCAAGAGCTTTCCGGGGCCTaGGGCACCTCGAGGCAGGTCCTGGAGAGAAGGGAA +
Preference number: 3 (lower is better)
Translates to: VQAAILQELSGA*GTSRQVLERRE
Trigger: TTCCCTTCTCTCCAGGACCTGCCTCGAGGTGCCCCAGGCCCCGGAAAGCTCTTGCAGAATTGCAGCTTGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
3UTR CCA 72 bp ATAAACCTCTCACTGCTGAACCAAGGGGAGGGGCCGTaGCCTGTGACAGGCAGCCATGGTGAGGAGGCAGAG +
Preference number: 3 (lower is better)
Translates to: INLSLLNQGEGP*PVTGSHGEEAE
Trigger: CTCTGCCTCCTCACCATGGCTGCCTGTCACAGGCCACGGCCCCTCCCCTTGGTTCAGCAGTGAGAGGTTTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397272.7
3UTR CCA 72 bp ACTGCAGTTGGCCACTATCCTAGTCTGGGCAGGGCTTaGGGACGCCGTGGGCAGCCACAGTTGCACATAGCA +
Preference number: 3 (lower is better)
Translates to: TAVGHYPSLGRA*GRRGQPQLHIA
Trigger: TGCTATGTGCAACTGTGGCTGCCCACGGCGTCCCCAAGCCCTGCCCAGACTAGGATAGTGGCCAACTGCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565553.1
3UTR-3UTR CAA 90 bp GAGACACGCGCACATCTCCCACCTGGAGCAGCCAGAATGGGACATCACCCCACATGTTGGTCAGACAGCTaGGCAGGGTTCTCCTCCTGG +
Preference number: 3 (lower is better)
Translates to: ETRAHLPPGAARMGHHPTCWSDS*AGFSSW
Trigger: CCAGGAGGAGAACCCTGCCAAGCTGTCTGACCAACA...TGTGGGGTGATGTCCCATTCTGGCTGCTCCAGGTGGGAGATGTGCGCGTGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
3UTR-3UTR CAA 90 bp CTCCCACCTGGAGCAGCCAGAATGGGACATCACCCCACAGGCTTTAGGGCGCTGACGTTGTTCAGGACGTaGTATCGACTGAGGGCCACC +
Preference number: 3 (lower is better)
Translates to: LPPGAARMGHHPTGFRALTLFRT*YRLRAT
Trigger: GGTGGCCCTCAGTCGATACAACGTCCTGAACAACGT...CAGCGCCCTAAAGCCTGTGGGGTGATGTCCCATTCTGGCTGCTCCAGGTGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000562320.1
ENST00000569985.5
3UTR GCA 72 bp ACTGTAGCCGCTCCGTGGACAAAGCTCCCATCTTACTaGTGCAGACGTGAACCTGGGCACGCTCAATGGGGC +
Preference number: 3 (lower is better)
Translates to: TVAAPWTKLPSY*CRREPGHAQWG
Trigger: GCCCCATTGAGCGTGCCCAGGTTCACGTCTGCAGCAGTAAGATGGGAGCTTTGTCCACGGAGCGGCTACAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
3UTR GCA 72 bp CTGCCCATGCCTTGGAGTAACCCACCTCCAGGAACTTaGACACCCTCCTGCCCCACATACAGGTGCACACCT +
Preference number: 3 (lower is better)
Translates to: LPMPWSNPPPGT*TPSCPTYRCTP
Trigger: AGGTGTGCACCTGTATGTGGGGCAGGAGGGTGTGCAAGTTCCTGGAGGTGGGTTACTCCAAGGCATGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397272.7
3UTR GCA 72 bp AAAGAGGCAAGAGCCCAGGCGAGGCTCCCTCTGCACTaGCCATGCCTTGGAGTAACCCACCTCCAGGAACTT +
Preference number: 3 (lower is better)
Translates to: KEARAQARLPLH*PCLGVTHLQEL
Trigger: AAGTTCCTGGAGGTGGGTTACTCCAAGGCATGGGCAGTGCAGAGGGAGCCTCGCCTGGGCTCTTGCCTCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397272.7
3UTR CCA 72 bp TCTGAGGACTTGGGCCCTCTGAGGTCCTTCTGTGTCTaGGGTGGGCTCTGTGGCTCACCTGATTCTCTCCAC +
Preference number: 3 (lower is better)
Translates to: SEDLGPLRSFCV*GGLCGSPDSLH
Trigger: GTGGAGAGAATCAGGTGAGCCACAGAGCCCACCCCAGACACAGAAGGACCTCAGAGGGCCCAAGTCCTCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
3UTR CCA 72 bp ATATGCTGCAGAGGCCGTGGCCAGATGGAGAGGGCCTaGCCAGAACGGGATCTCCTCTTCACGAATCTGAGG +
Preference number: 3 (lower is better)
Translates to: ICCRGRGQMERA*PERDLLFTNLR
Trigger: CCTCAGATTCGTGAAGAGGAGATCCCGTTCTGGCCAGGCCCTCTCCATCTGGCCACGGCCTCTGCAGCATAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397272.7
3UTR-3UTR CAA 90 bp GCCACACTTGAGGCTTCTCAGGTCAAACAGGAGCAGAGAGAGCTGGTCGCTGCCCGTGGGCAGCCACAGTaGCACATAGCAGTCGGCTTT +
Preference number: 3 (lower is better)
Translates to: ATLEASQVKQEQRELVAARGQPQ*HIAVGF
Trigger: AAAGCCGACTGCTATGTGCAACTGTGGCTGCCCACG...GGCAGCGACCAGCTCTCTCTGCTCCTGTTTGACCTGAGAAGCCTCAAGTGTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565553.1
3UTR-3UTR CAA 90 bp GACTGTGGTCCAGGTTCGAAGAGTGAAGCCTGGGTAACTGGCAGGGAGACACGCGCAGGCACAGCAGTGTaGATGACAATGGCCACAGCA +
Preference number: 3 (lower is better)
Translates to: DCGPGSKSEAWVTGRETRAGTAV*MTMATA
Trigger: TGCTGTGGCCATTGTCATCAACACTGCTGTGCCTGC...GCGTGTCTCCCTGCCAGTTACCCAGGCTTCACTCTTCGAACCTGGACCACAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397272.7
3UTR TCA 72 bp AGGAGCCTCGTTCGCAGCCTCGAGGGGTTGTGCAGCTaGGGCTTCTGGCAGTCGTCTGTGATATTCACACTG +
Preference number: 3 (lower is better)
Translates to: RSLVRSLEGLCS*GFWQSSVIFTL
Trigger: CAGTGTGAATATCACAGACGACTGCCAGAAGCCTCAGCTGCACAACCCCTCGAGGCTGCGAACGAGGCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
3UTR GCA 72 bp GACAGGGGGCAGAAGGAACAAGGTCTCAAGTGCTGCTaGAGGCTCCTAGGCAGCTCAGCACTGGAGGCATAT +
Preference number: 3 (lower is better)
Translates to: DRGQKEQGLKCC*RLLGSSALEAY
Trigger: ATATGCCTCCAGTGCTGAGCTGCCTAGGAGCCTGCAGCAGCACTTGAGACCTTGTTCCTTCTGCCCCCTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397272.7
3UTR-3UTR CAA 90 bp GAGACACGCGCACATCTCCCACCTGGAGCAGCCAGAATGGGACATCACCCCACAAGCCCCTCATTGTTCTaGATAGCAGTGCATCCAGGA +
Preference number: 3 (lower is better)
Translates to: ETRAHLPPGAARMGHHPTSPSLF*IAVHPG
Trigger: TCCTGGATGCACTGCTATCAAGAACAATGAGGGGCT...TGTGGGGTGATGTCCCATTCTGGCTGCTCCAGGTGGGAGATGTGCGCGTGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
3UTR TCA 72 bp GCTGGTCGCTGCCCAGGATGTCCTTGTCATAGAGGGTaGGCTCCAGGACGTTCTTCACAGCACCATGGATCT +
Preference number: 3 (lower is better)
Translates to: AGRCPGCPCHRG*APGRSSQHHGS
Trigger: AGATCCATGGTGCTGTGAAGAACGTCCTGGAGCTCACCCTCTATGACAAGGACATCCTGGGCAGCGACCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000565553.1
3UTR TCA 72 bp GGGGACTGCCCAGCTCAAGTGGCCAAAGTGCAGCCCTaGGAAGCTGGAGCTGCTTGCTTTTATTCAGTGCAG +
Preference number: 3 (lower is better)
Translates to: GDCPAQVAKVQP*EAGAACFYSVQ
Trigger: CTGCACTGAATAAAAGCAAGCAGCTCCAGCTTCTCAGGGCTGCACTTTGGCCACTTGAGCTGGGCAGTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397272.7
3UTR CCA 72 bp CTGAGGGCTGCCCACACTAGAGAGGTTCTAGGTATTTaGAGAGTCCCTGGCGGGTCAGGGGAAATGGAGAAG +
Preference number: 3 (lower is better)
Translates to: LRAAHTREVLGI*RVPGGSGEMEK
Trigger: CTTCTCCATTTCCCCTGACCCGCCAGGGACTCTCCAAATACCTAGAACCTCTCTAGTGTGGGCAGCCCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397272.7
3UTR CCA 72 bp ACATTAAACTGGCTGGGTTACCTTCGGCCCCTCCCCTaGCTTCTTGCTCTGCGTGGCTCCCAGATTCAGTCT +
Preference number: 3 (lower is better)
Translates to: TLNWLGYLRPLP*LLALRGSQIQS
Trigger: AGACTGAATCTGGGAGCCACGCAGAGCAAGAAGCCAGGGGAGGGGCCGAAGGTAACCCAGCCAGTTTAATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397272.7
3UTR TCA 72 bp CTCTGTGGCTCACCTGATTCTCTCCACACCCCGCTGTaGAATGAGTGCTGTTCTCTTCTGCCCTACATCCCC +
Preference number: 3 (lower is better)
Translates to: LCGSPDSLHTPL*NECCSLLPYIP
Trigger: GGGGATGTAGGGCAGAAGAGAACAGCACTCATTTCACAGCGGGGTGTGGAGAGAATCAGGTGAGCCACAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
3UTR TCA 72 bp TATCTGAGCACAAGTGGCATTGCCTACACTTCTGTGTaGGAAGGTCCCCGCCCACTCTGCACAAGCCCACGT +
Preference number: 3 (lower is better)
Translates to: YLSTSGIAYTSV*EGPRPLCTSPR
Trigger: ACGTGGGCTTGTGCAGAGTGGGCGGGGACCTTCTCACACAGAAGTGTAGGCAATGCCACTTGTGCTCAGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397272.7
3UTR GCA 72 bp TCCACACCCCGCTGTGAAATGAGTGCTGTTCTCTTCTaGCCTACATCCCCAAGAGTCCCTGGAGCGATCTAC +
Preference number: 3 (lower is better)
Translates to: STPRCEMSAVLF*PTSPRVPGAIY
Trigger: GTAGATCGCTCCAGGGACTCTTGGGGATGTAGGGCAGAAGAGAACAGCACTCATTTCACAGCGGGGTGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
3UTR CCA 72 bp CCCCCAGTTCCTGAGTGTAGTACTGTAGCCGCTCCGTaGACAAAGCTCCCATCTTACTGCTGCAGACGTGAA +
Preference number: 3 (lower is better)
Translates to: PPVPECSTVAAP*TKLPSYCCRRE
Trigger: TTCACGTCTGCAGCAGTAAGATGGGAGCTTTGTCCACGGAGCGGCTACAGTACTACACTCAGGAACTGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
3UTR-3UTR CAA 90 bp TCTCTTCTGCCCTACATCCCCAAGAGTCCCTGGAGCGATCTACTGCCCATCTTCGGTGTGTTTGTGAGGTaGGCCACACTTGAGGCTTCT +
Preference number: 3 (lower is better)
Translates to: SLLPYIPKSPWSDLLPIFGVFVR*ATLEAS
Trigger: AGAAGCCTCAAGTGTGGCCAACCTCACAAACACACC...GAAGATGGGCAGTAGATCGCTCCAGGGACTCTTGGGGATGTAGGGCAGAAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290497.11
3UTR-3UTR CAA 90 bp GCTGTCTTTAGCTATTCTCCTCCAAAGCTATGCAGAGCCTTCCAACCTTTCAGACCCACCTCCAGGAACTaGCACACCCTCCTGCCCCAC +
Preference number: 3 (lower is better)
Translates to: AVFSYSPPKLCRAFQPFRPTSRN*HTLLPH
Trigger: GTGGGGCAGGAGGGTGTGCAAGTTCCTGGAGGTGGG...TCTGAAAGGTTGGAAGGCTCTGCATAGCTTTGGAGGAGAATAGCTAAAGACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397272.7
3UTR GCA 72 bp TGCCCTACATCCCCAAGAGTCCCTGGAGCGATCTACTaGCCATCTTCTCCAAAAACACACAAGGAGAGCCCT +
Preference number: 3 (lower is better)
Translates to: CPTSPRVPGAIY*PSSPKTHKESP
Trigger: AGGGCTCTCCTTGTGTGTTTTTGGAGAAGATGGGCAGTAGATCGCTCCAGGGACTCTTGGGGATGTAGGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
3UTR GCA 72 bp GTCTCCTCCCAAACCTTATCTGAGCACAAGTGGCATTaGCTACACTTCTGTGTGAGAAGGTCCCCGCCCACT +
Preference number: 3 (lower is better)
Translates to: VSSQTLSEHKWH*LHFCVRRSPPT
Trigger: AGTGGGCGGGGACCTTCTCACACAGAAGTGTAGGCAATGCCACTTGTGCTCAGATAAGGTTTGGGAGGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397272.7
3UTR CCA 72 bp GTCCCAGTCTCCTCCCAAACCTTATCTGAGCACAAGTaGCATTGCCTACACTTCTGTGTGAGAAGGTCCCCG +
Preference number: 3 (lower is better)
Translates to: VPVSSQTLSEHK*HCLHFCVRRSP
Trigger: CGGGGACCTTCTCACACAGAAGTGTAGGCAATGCCACTTGTGCTCAGATAAGGTTTGGGAGGAGACTGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397272.7
3UTR CCA 72 bp AAGACTCAGATCTCTCCTGAGGAGCAGACATTAAACTaGCTGGGTTACCTTCGGCCCCTCCCCTGGCTTCTT +
Preference number: 3 (lower is better)
Translates to: KTQISPEEQTLN*LGYLRPLPWLL
Trigger: AAGAAGCCAGGGGAGGGGCCGAAGGTAACCCAGCCAGTTTAATGTCTGCTCCTCAGGAGAGATCTGAGTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397272.7
3UTR-3UTR CAA 90 bp TATTTGCATGATGTGGCCACTACACACATCACCAGAGACTGTGGTCCAGGTTCGACTCAATCCCAGCACTaGCTGCAGGGCCTTGGACAC +
Preference number: 3 (lower is better)
Translates to: YLHDVATTHITRDCGPGSTQSQH*LQGLGH
Trigger: GTGTCCAAGGCCCTGCAGCAAGTGCTGGGATTGAGT...CGAACCTGGACCACAGTCTCTGGTGATGTGTGTAGTGGCCACATCATGCAAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
3UTR-3UTR CAA 90 bp TATTTGCATGATGTGGCCACTACACACATCACCAGAGACTGTGGTCCAGGTTCGGGGGTGTCTGGCCTGTaGATGACAAAGTCCCCAAAG +
Preference number: 3 (lower is better)
Translates to: YLHDVATTHITRDCGPGSGVSGL*MTKSPK
Trigger: CTTTGGGGACTTTGTCATCAACAGGCCAGACACCCC...CGAACCTGGACCACAGTCTCTGGTGATGTGTGTAGTGGCCACATCATGCAAATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000562320.1
ENST00000569985.5
3UTR TCA 72 bp TGTGAATCCTGGTGGTTGAGTGGGAAGGTGTGTTTGTaGGGTTGGCCACACTTGAGGCTTCTCAGGTCAAAC +
Preference number: 3 (lower is better)
Translates to: CESWWLSGKVCL*GWPHLRLLRSN
Trigger: GTTTGACCTGAGAAGCCTCAAGTGTGGCCAACCTCACAAACACACCTTCCCACTCAACCACCAGGATTCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290497.11
3UTR GCA 72 bp AAAGCTATGCAGAGCCTTCCAACCTTTCAGAAGGCCTaGTCCTTTCCCTATAGCTTCTCCCACCACTCTGAC +
Preference number: 3 (lower is better)
Translates to: KAMQSLPTFQKA*SFPYSFSHHSD
Trigger: GTCAGAGTGGTGGGAGAAGCTATAGGGAAAGGAGCAGGCCTTCTGAAAGGTTGGAAGGCTCTGCATAGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397272.7
3UTR GCA 72 bp AGCCCTGAGAAGCTGGAGCTGCTTGCTTTTATTCAGTaGAGGCACAATGCCAAAAGCCTGGAGCAAACACTG +
Preference number: 3 (lower is better)
Translates to: SPEKLELLAFIQ*RHNAKSLEQTL
Trigger: CAGTGTTTGCTCCAGGCTTTTGGCATTGTGCCTGCACTGAATAAAAGCAAGCAGCTCCAGCTTCTCAGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397272.7
3UTR CCA 72 bp CTCATAGGTGAAGTTCATCATGCCATAGGGGGTGTCTaGCCTGTTGATGACAAAGTCCCCAAAGGCCTTCTC +
Preference number: 3 (lower is better)
Translates to: LIGEVHHAIGGV*PVDDKVPKGLL
Trigger: GAGAAGGCCTTTGGGGACTTTGTCATCAACAGGCCAGACACCCCCTATGGCATGATGAACTTCACCTATGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000562320.1
ENST00000569985.5
3UTR CCA 72 bp TGCTGTTCTCTTCTGCCCTACATCCCCAAGAGTCCCTaGAGCGATCTACTGCCCATCTTCTCCAAAAACACA +
Preference number: 3 (lower is better)
Translates to: CCSLLPYIPKSP*SDLLPIFSKNT
Trigger: TGTGTTTTTGGAGAAGATGGGCAGTAGATCGCTCCAGGGACTCTTGGGGATGTAGGGCAGAAGAGAACAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
3UTR-3UTR CAA 90 bp CTGTCTTTAGCTATTCTCCTCCAAAGCTATGCAGAGCCTTCCAACCTTTCAGAACCAGATTCAGTCTTGTaGGAGCCTCCCCATCCCTGG +
Preference number: 3 (lower is better)
Translates to: LSLAILLQSYAEPSNLSEPDSVL*EPPHPW
Trigger: CCAGGGATGGGGAGGCTCCAACAAGACTGAATCTGG...TTCTGAAAGGTTGGAAGGCTCTGCATAGCTTTGGAGGAGAATAGCTAAAGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397272.7
3UTR-3UTR CAA 90 bp AAAAGGGGCTTCCAAGGAATAGTCAAAGGACAGAATGAGGTCCACTGCTCTCTGTGTGAATCCTGGTGGTaGAGTGGGAAGGTGTGTTTG +
Preference number: 3 (lower is better)
Translates to: KRGFQGIVKGQNEVHCSLCESWW*SGKVCL
Trigger: CAAACACACCTTCCCACTCAACCACCAGGATTCACA...CAGAGAGCAGTGGACCTCATTCTGTCCTTTGACTATTCCTTGGAAGCCCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290497.11
3UTR GCA 72 bp GGGAAATGGAGAAGAGGGAGAGTGAGAAACAAAACTTaGCAAGACCCATTGGATGCATCTGGGAAAGAGGCA +
Preference number: 3 (lower is better)
Translates to: GKWRRGRVRNKT*QDPLDASGKEA
Trigger: TGCCTCTTTCCCAGATGCATCCAATGGGTCTTGGCAAGTTTTGTTTCTCACTCTCCCTCTTCTCCATTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397272.7
3UTR GCA 72 bp AGAACAGCTGTCTTTAGCTATTCTCCTCCAAAGCTATaGAGAGCCTTCCAACCTTTCAGAAGGCCTGCTCCT +
Preference number: 3 (lower is better)
Translates to: RTAVFSYSPPKL*RAFQPFRRPAP
Trigger: AGGAGCAGGCCTTCTGAAAGGTTGGAAGGCTCTGCATAGCTTTGGAGGAGAATAGCTAAAGACAGCTGTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397272.7
3UTR-3UTR CAA 90 bp CTATATTTGCATGATGTGGCCACTACACACATCACCAGAGACTGTGGTCCAGGTGTGTATGCCTTTTTCTaGGGAGAGGGTCTGTGGTTT +
Preference number: 3 (lower is better)
Translates to: LYLHDVATTHITRDCGPGVYAFF*GEGLWF
Trigger: AAACCACAGACCCTCTCCCAAGAAAAAGGCATACAC...ACCTGGACCACAGTCTCTGGTGATGTGTGTAGTGGCCACATCATGCAAATATAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397272.7
3UTR TCA 72 bp CATTTAGCTCCTAGGAATGGTGAGACTATATTTGCATaGTGTGGCCACTACACACATCACCAGAGACTGTGG +
Preference number: 3 (lower is better)
Translates to: HLAPRNGETIFA*CGHYTHHQRLW
Trigger: CCACAGTCTCTGGTGATGTGTGTAGTGGCCACATCATGCAAATATAGTCTCACCATTCCTAGGAGCTAAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR TCA 90 bp GAGGCCCCAGAGGTCGATGAGGGACACGCTGTGGCCACTGCGCTCCCGGACCCCCCCAGCTTGCTGGTCTaGGCCTCCAACTCTGCGCTG +
Preference number: 4 (lower is better)
Translates to: EAPEVDEGHAVATALPDPPSLLV*ASNSAL
Trigger: CAGCGCAGAGTTGGAGGCTCAGACCAGCAAGCTGGG...GGGGTCCGGGAGCGCAGTGGCCACAGCGTGTCCCTCATCGACCTCTGGGGCCTC
69% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR GCA 90 bp CCAGAGGTCGATGAGGGACACGCTGTGGCCACTGCGCTCCCGGACCCCCAGTTCCTCTCCCGAGCCTGGTaGCGGTCCAGAGCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: PEVDEGHAVATALPDPQFLSRAW*RSRASW
Trigger: CCAGCTGGCTCTGGACCGGCACCAGGCTCGGGAGAG...GAACTGGGGGTCCGGGAGCGCAGTGGCCACAGCGTGTCCCTCATCGACCTCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR GCA 90 bp CTGCCTAGAGCCGTACTCTTCCCGTGGGGCTGTCCCATCTCCCCGGAGCGTGCCGTTTCCCGCCGCCAGTaGCTCCACAGAGGGCCCCTC +
Preference number: 4 (lower is better)
Translates to: LPRAVLFPWGCPISPERAVSRRQ*LHRGPL
Trigger: GAGGGGCCCTCTGTGGAGGCACTGGCGGCGGGAAAC...GGCACGCTCCGGGGAGATGGGACAGCCCCACGGGAAGAGTACGGCTCTAGGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000561627.5
CDS-3UTR CCA 90 bp CTGCCTAGAGCCGTACTCTTCCCGTGGGGCTGTCCCATCTCCCCGGAGCGTGCCTGCCCAAAGCATGGCTaGGCAGCCCGGGCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: LPRAVLFPWGCPISPERACPKHG*AARAPA
Trigger: TGCTGGGGCCCGGGCTGCCCAGCCATGCTTTGGGCA...GGCACGCTCCGGGGAGATGGGACAGCCCCACGGGAAGAGTACGGCTCTAGGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000561627.5
CDS-3UTR CCA 90 bp CCCCAGAGGTCGATGAGGGACACGCTGTGGCCACTGCGCTCCCGGACCCCCAGTGCCGTACTCTTCCCGTaGGGCTGTCCCATCTCCCCG +
Preference number: 4 (lower is better)
Translates to: PQRSMRDTLWPLRSRTPSAVLFP*GCPISP
Trigger: CGGGGAGATGGGACAGCCCCACGGGAAGAGTACGGC...ACTGGGGGTCCGGGAGCGCAGTGGCCACAGCGTGTCCCTCATCGACCTCTGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000290497.11
CDS-3UTR CCA 90 bp CCAGAGGTCGATGAGGGACACGCTGTGGCCACTGCGCTCCCGGACCCCCAGTTCCGCATGGGGGTGAGCTaGTTGGGGAAGGCGTCCGGG +
Preference number: 4 (lower is better)
Translates to: PEVDEGHAVATALPDPQFRMGVS*LGKASG
Trigger: CCCGGACGCCTTCCCCAACCAGCTCACCCCCATGCG...GAACTGGGGGTCCGGGAGCGCAGTGGCCACAGCGTGTCCCTCATCGACCTCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR CCA 90 bp GAGGCCCCAGAGGTCGATGAGGGACACGCTGTGGCCACTGCGCTCCCGGACCCCGGAGGCCTGGCTCTGTaGGAGGCGTACTCTTCCCGT +
Preference number: 4 (lower is better)
Translates to: EAPEVDEGHAVATALPDPGGLAL*EAYSSR
Trigger: ACGGGAAGAGTACGCCTCCCACAGAGCCAGGCCTCC...GGGGTCCGGGAGCGCAGTGGCCACAGCGTGTCCCTCATCGACCTCTGGGGCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569985.5
CDS-3UTR TCA 90 bp GAGCCCTGCCCCAGTCCAAGCTGCAATTCTGCAAGAGCTTTCCGGGGCCTGGGGAGGGCCCCTGTGGGGTaGGGAGCCTCGTTCGCAGCC +
Preference number: 4 (lower is better)
Translates to: EPCPSPSCNSARAFRGLGRAPVG*GASFAA
Trigger: GGCTGCGAACGAGGCTCCTCACCCCACAGGGGCCCT...CCCCAGGCCCCGGAAAGCTCTTGCAGAATTGCAGCTTGGACTGGGGCAGGGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
CDS-3UTR TCA 90 bp CCCCAGAGGTCGATGAGGGACACGCTGTGGCCACTGCGCTCCCGGACCCCCAGTAGGTCCACTGCTCTCTaGGGCAGCAGAGCCAGTGGG +
Preference number: 4 (lower is better)
Translates to: PQRSMRDTLWPLRSRTPSRSTAL*GSRASG
Trigger: CCCACTGGCTCTGCTGCCTCAGAGAGCAGTGGACCT...ACTGGGGGTCCGGGAGCGCAGTGGCCACAGCGTGTCCCTCATCGACCTCTGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR GCA 90 bp CTGCCTAGAGCCGTACTCTTCCCGTGGGGCTGTCCCATCTCCCCGGAGCGTGCCCCCAGCAGGGAACCCTaGCTGCGCTCCTCTGGTTGC +
Preference number: 4 (lower is better)
Translates to: LPRAVLFPWGCPISPERAPSREP*LRSSGC
Trigger: GCAACCAGAGGAGCGCAGGCAGGGTTCCCTGCTGGG...GGCACGCTCCGGGGAGATGGGACAGCCCCACGGGAAGAGTACGGCTCTAGGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000561627.5
CDS-3UTR CCA 90 bp GAGCCGTACTCTTCCCGTGGGGCTGTCCCATCTCCCCGGAGCGTGCCCTGGATTAGAGTGCCCAAAGCATaGCTGGGCAGCCCGGGCCCC +
Preference number: 4 (lower is better)
Translates to: EPYSSRGAVPSPRSVPWIRVPKA*LGSPGP
Trigger: GGGGCCCGGGCTGCCCAGCCATGCTTTGGGCACTCT...AATCCAGGGCACGCTCCGGGGAGATGGGACAGCCCCACGGGAAGAGTACGGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000561627.5
CDS-3UTR CCA 90 bp CTGCCTAGAGCCGTACTCTTCCCGTGGGGCTGTCCCATCTCCCCGGAGCGTGCCGCCGTACTCTTCCCGTaGGGCTGTCCCATCTCCCCG +
Preference number: 4 (lower is better)
Translates to: LPRAVLFPWGCPISPERAAVLFP*GCPISP
Trigger: CGGGGAGATGGGACAGCCCCACGGGAAGAGTACGGC...GGCACGCTCCGGGGAGATGGGACAGCCCCACGGGAAGAGTACGGCTCTAGGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000561627.5
CDS-3UTR CCA 90 bp CTGCCTAGAGCCGTACTCTTCCCGTGGGGCTGTCCCATCTCCCCGGAGCGTGCCGGAGGCCTGGCTCTGTaGGAGGCTGCAGGGGCAAGA +
Preference number: 4 (lower is better)
Translates to: LPRAVLFPWGCPISPERAGGLAL*EAAGAR
Trigger: TCTTGCCCCTGCAGCCTCCCACAGAGCCAGGCCTCC...GGCACGCTCCGGGGAGATGGGACAGCCCCACGGGAAGAGTACGGCTCTAGGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000561627.5
CDS-3UTR CCA 90 bp CCGAGCCTGGTGCCGGTCCAGAGCCAGCTGGAGGGCGCACTTCAAGGTCTCCACGGTGGGTGGGAGGCCTaGCTCTGTGGGAGGCGTACT +
Preference number: 4 (lower is better)
Translates to: PSLVPVQSQLEGALQGLHGGWEA*LCGRRT
Trigger: AGTACGCCTCCCACAGAGCCAGGCCTCCCACCCACC...GTGGAGACCTTGAAGTGCGCCCTCCAGCTGGCTCTGGACCGGCACCAGGCTCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569985.5
CDS-3UTR GCA 90 bp CCCCAGAGGTCGATGAGGGACACGCTGTGGCCACTGCGCTCCCGGACCCCCAGTCCACCTTGGCCAGAGTaGCCAAAGCATGGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: PQRSMRDTLWPLRSRTPSPPWPE*PKHGWA
Trigger: TGCCCAGCCATGCTTTGGGCACTCTGGCCAAGGTGG...ACTGGGGGTCCGGGAGCGCAGTGGCCACAGCGTGTCCCTCATCGACCTCTGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR GCA 90 bp TGCCTAGAGCCGTACTCTTCCCGTGGGGCTGTCCCATCTCCCCGGAGCGTGCCCCCCCCTCGCCCAGCTTaGTGGTCTGAGCCTCCAACT +
Preference number: 4 (lower is better)
Translates to: CLEPYSSRGAVPSPRSVPPPRPA*WSEPPT
Trigger: AGTTGGAGGCTCAGACCAGCAAGCTGGGCGAGGGGG...GGGCACGCTCCGGGGAGATGGGACAGCCCCACGGGAAGAGTACGGCTCTAGGCA
67% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000290497.11
CDS-3UTR GCA 90 bp CCTAGTCTGGGCAGGGCTTGGGGACGCCGTGGGCAGCCACAGTTGCACATAGCAGTTTCCCGCCGCCAGTaGCTCCACAGAGGGCCCCTC +
Preference number: 4 (lower is better)
Translates to: PSLGRAWGRRGQPQLHIAVSRRQ*LHRGPL
Trigger: GAGGGGCCCTCTGTGGAGGCACTGGCGGCGGGAAAC...TGCTATGTGCAACTGTGGCTGCCCACGGCGTCCCCAAGCCCTGCCCAGACTAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565553.1
CDS-3UTR CCA 90 bp CTCAACAAGGAGGCCCCAGAGGTCGATGAGGGACACGCTGTGGCCACTGCGCTCAGAGTGCCCAAAGCATaGCTGGGCAGCCCGGGCCCC +
Preference number: 4 (lower is better)
Translates to: LNKEAPEVDEGHAVATALRVPKA*LGSPGP
Trigger: GGGGCCCGGGCTGCCCAGCCATGCTTTGGGCACTCT...GAGCGCAGTGGCCACAGCGTGTCCCTCATCGACCTCTGGGGCCTCCTTGTTGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR CCA 90 bp CTAGAGCCGTACTCTTCCCGTGGGGCTGTCCCATCTCCCCGGAGCGTGCCCTGGGCCACTATCCTAGTCTaGGCAGGGCTTGGGGACGCC +
Preference number: 4 (lower is better)
Translates to: LEPYSSRGAVPSPRSVPWATILV*AGLGDA
Trigger: GGCGTCCCCAAGCCCTGCCCAGACTAGGATAGTGGC...CCAGGGCACGCTCCGGGGAGATGGGACAGCCCCACGGGAAGAGTACGGCTCTAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000561627.5
CDS-3UTR CCA 90 bp TGCCTAGAGCCGTACTCTTCCCGTGGGGCTGTCCCATCTCCCCGGAGCGTGCCCCCAGGCACTGCCAGCTaGAGCTGCCTAGAGCCGTAC +
Preference number: 4 (lower is better)
Translates to: CLEPYSSRGAVPSPRSVPPGTAS*SCLEPY
Trigger: GTACGGCTCTAGGCAGCTCCAGCTGGCAGTGCCTGG...GGGCACGCTCCGGGGAGATGGGACAGCCCCACGGGAAGAGTACGGCTCTAGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000561627.5
CDS-3UTR CCA 90 bp TCCTCCATGTCCTCAGGGCCCACCTCGATGCTAGGGAAGGGGATTCCTCGGTCCGCCCTCTCCCGAGCCTaGTGCCGGTCCAGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: SSMSSGPTSMLGKGIPRSALSRA*CRSRAS
Trigger: GCTGGCTCTGGACCGGCACCAGGCTCGGGAGAGGGC...GGACCGAGGAATCCCCTTCCCTAGCATCGAGGTGGGCCCTGAGGACATGGAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR TCA 90 bp GAGGCCCCAGAGGTCGATGAGGGACACGCTGTGGCCACTGCGCTCCCGGACCCCGGACGTTGTATCGACTaGGGGCCACCAGCCGATAAA +
Preference number: 4 (lower is better)
Translates to: EAPEVDEGHAVATALPDPGRCID*GPPADK
Trigger: TTTATCGGCTGGTGGCCCTCAGTCGATACAACGTCC...GGGGTCCGGGAGCGCAGTGGCCACAGCGTGTCCCTCATCGACCTCTGGGGCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR TCA 90 bp GAGGCCCCAGAGGTCGATGAGGGACACGCTGTGGCCACTGCGCTCCCGGACCCCCACCCCGCTGTGAAATaGGTGCTGTTCTCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: EAPEVDEGHAVATALPDPHPAVK*VLFSSA
Trigger: GGCAGAAGAGAACAGCACTCATTTCACAGCGGGGTG...GGGGTCCGGGAGCGCAGTGGCCACAGCGTGTCCCTCATCGACCTCTGGGGCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR GCA 90 bp CTGCCTAGAGCCGTACTCTTCCCGTGGGGCTGTCCCATCTCCCCGGAGCGTGCCGCAGGGAACCCTGCCTaGGCTCCTCTGGTTGCACAA +
Preference number: 4 (lower is better)
Translates to: LPRAVLFPWGCPISPERAAGNPA*APLVAQ
Trigger: TTGTGCAACCAGAGGAGCGCAGGCAGGGTTCCCTGC...GGCACGCTCCGGGGAGATGGGACAGCCCCACGGGAAGAGTACGGCTCTAGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000561627.5
CDS-3UTR GCA 90 bp GGCAGGGCTTGGGGACGCCGTGGGCAGCCACAGTTGCACATAGCAGTCGGCTTTCCCAGCAGGGAACCCTaGCTGCGCTCCTCTGGTTGC +
Preference number: 4 (lower is better)
Translates to: GRAWGRRGQPQLHIAVGFPSREP*LRSSGC
Trigger: GCAACCAGAGGAGCGCAGGCAGGGTTCCCTGCTGGG...AAAGCCGACTGCTATGTGCAACTGTGGCTGCCCACGGCGTCCCCAAGCCCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565553.1
CDS-3UTR GCA 90 bp CTAGAGCCGTACTCTTCCCGTGGGGCTGTCCCATCTCCCCGGAGCGTGCCCTGGGGGCAGCATCTTGTCTaGCAGCCACCTTGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: LEPYSSRGAVPSPRSVPWGQHLV*QPPWPE
Trigger: CTCTGGCCAAGGTGGCTGGCAGACAAGATGCTGCCC...CCAGGGCACGCTCCGGGGAGATGGGACAGCCCCACGGGAAGAGTACGGCTCTAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000561627.5
CDS-3UTR GCA 90 bp CCAGAGGTCGATGAGGGACACGCTGTGGCCACTGCGCTCCCGGACCCCCAGTTCGGGCAGCATCTTGTCTaGCAGCCACCTTGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: PEVDEGHAVATALPDPQFGQHLV*QPPWPE
Trigger: CTCTGGCCAAGGTGGCTGGCAGACAAGATGCTGCCC...GAACTGGGGGTCCGGGAGCGCAGTGGCCACAGCGTGTCCCTCATCGACCTCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR GCA 90 bp CTGCCTAGAGCCGTACTCTTCCCGTGGGGCTGTCCCATCTCCCCGGAGCGTGCCCATCTCCCCGGAGCGTaGCCTGGATTCTCAGACAGG +
Preference number: 4 (lower is better)
Translates to: LPRAVLFPWGCPISPERAHLPGA*PGFSDR
Trigger: CCTGTCTGAGAATCCAGGGCACGCTCCGGGGAGATG...GGCACGCTCCGGGGAGATGGGACAGCCCCACGGGAAGAGTACGGCTCTAGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000561627.5
CDS-3UTR GCA 90 bp TGCCTAGAGCCGTACTCTTCCCGTGGGGCTGTCCCATCTCCCCGGAGCGTGCCCGAGCTCCTGCAACCCTaGCAGGCTGCCGTACAGAGA +
Preference number: 4 (lower is better)
Translates to: CLEPYSSRGAVPSPRSVPELLQP*QAAVQR
Trigger: TCTCTGTACGGCAGCCTGGCAGGGTTGCAGGAGCTC...GGGCACGCTCCGGGGAGATGGGACAGCCCCACGGGAAGAGTACGGCTCTAGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290497.11
CDS-3UTR GCA 90 bp CTGCAACCCTGCCAGGCTGCCGTACAGAGAAGACATGGCTCGGGTTCCACCCCCAGAAGGCCGAGCTCCTaGAACCCTGCCAGGCTGCCG +
Preference number: 4 (lower is better)
Translates to: LQPCQAAVQRRHGSGSTPRRPSS*NPARLP
Trigger: CGGCAGCCTGGCAGGGTTGCAGGAGCTCGGCCTTCT...GGGGGTGGAACCCGAGCCATGTCTTCTCTGTACGGCAGCCTGGCAGGGTTGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR GCA 90 bp CAGCTCAGCACTGGAGGCATATGCTGCAGAGGCCGTGGCCAGATGGAGAGGGCCAGAAGGCCGAGCTCCTaGAACCCTGCCAGGCTGCCG +
Preference number: 4 (lower is better)
Translates to: QLSTGGICCRGRGQMERARRPSS*NPARLP
Trigger: CGGCAGCCTGGCAGGGTTGCAGGAGCTCGGCCTTCT...GGCCCTCTCCATCTGGCCACGGCCTCTGCAGCATATGCCTCCAGTGCTGAGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR GCA 90 bp CAGCTCAGCACTGGAGGCATATGCTGCAGAGGCCGTGGCCAGATGGAGAGGGCCACACGCTGTGGCCACTaGGCTCCCGGACCCCCAGTT +
Preference number: 4 (lower is better)
Translates to: QLSTGGICCRGRGQMERATRCGH*APGPPV
Trigger: AACTGGGGGTCCGGGAGCGCAGTGGCCACAGCGTGT...GGCCCTCTCCATCTGGCCACGGCCTCTGCAGCATATGCCTCCAGTGCTGAGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR GCA 90 bp AGCCCAAATAACTGGCTCCCCCAGCCCTCGCAACTCATGCCAGCTGGAGGGCTGCTCTCCCGAGCCTGGTaGCGGTCCAGAGCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: SPNNWLPQPSQLMPAGGLLSRAW*RSRASW
Trigger: CCAGCTGGCTCTGGACCGGCACCAGGCTCGGGAGAG...CAGCCCTCCAGCTGGCATGAGTTGCGAGGGCTGGGGGAGCCAGTTATTTGGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR GCA 90 bp GAGCCCTGCCCCAGTCCAAGCTGCAATTCTGCAAGAGCTTTCCGGGGCCTGGGGCAGTCCTCCGCTTCCTaGCTTGGTCAGGCCCCTGCC +
Preference number: 4 (lower is better)
Translates to: EPCPSPSCNSARAFRGLGQSSAS*LGQAPA
Trigger: GGCAGGGGCCTGACCAAGGCAGGAAGCGGAGGACTG...CCCCAGGCCCCGGAAAGCTCTTGCAGAATTGCAGCTTGGACTGGGGCAGGGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
CDS-3UTR CCA 90 bp CTCCCACCTGGAGCAGCCAGAATGGGACATCACCCCACAGGCTTTAGGGCGCTGTGCCCAAAGCATGGCTaGGCAGCCCGGGCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: LPPGAARMGHHPTGFRALCPKHG*AARAPA
Trigger: TGCTGGGGCCCGGGCTGCCCAGCCATGCTTTGGGCA...CAGCGCCCTAAAGCCTGTGGGGTGATGTCCCATTCTGGCTGCTCCAGGTGGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR CCA 90 bp AATGGGGGAGCGGGGGTCCTCAGCCTTGGCAAACAGATAGCACTCACGGGCCTCAGAGTGCCCAAAGCATaGCTGGGCAGCCCGGGCCCC +
Preference number: 4 (lower is better)
Translates to: NGGAGVLSLGKQIALTGLRVPKA*LGSPGP
Trigger: GGGGCCCGGGCTGCCCAGCCATGCTTTGGGCACTCT...GAGGCCCGTGAGTGCTATCTGTTTGCCAAGGCTGAGGACCCCCGCTCCCCCATT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR CCA 90 bp TGGGGACGCCGTGGGCAGCCACAGTTGCACATAGCAGTCGGCTTTGGACACTGCAGAGTGCCCAAAGCATaGCTGGGCAGCCCGGGCCCC +
Preference number: 4 (lower is better)
Translates to: WGRRGQPQLHIAVGFGHCRVPKA*LGSPGP
Trigger: GGGGCCCGGGCTGCCCAGCCATGCTTTGGGCACTCT...GCAGTGTCCAAAGCCGACTGCTATGTGCAACTGTGGCTGCCCACGGCGTCCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565553.1
CDS-3UTR CCA 90 bp TGGCTTCTCGTAGGCTCCAGGCACTGCCAGCTGGAGCTGCCTAGAGCCGTACTCAGTCTGGGCAGGGCTTaGGGACGCCGTGGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: WLLVGSRHCQLELPRAVLSLGRA*GRRGQP
Trigger: TGGCTGCCCACGGCGTCCCCAAGCCCTGCCCAGACT...GAGTACGGCTCTAGGCAGCTCCAGCTGGCAGTGCCTGGAGCCTACGAGAAGCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000561627.5
CDS-3UTR CCA 90 bp CCGAGCCTGGTGCCGGTCCAGAGCCAGCTGGAGGGCGCACTTCAAGGTCTCCACCACCTGGGACCAGGCTaGGTCCCTGTAGAGTGTGGA +
Preference number: 4 (lower is better)
Translates to: PSLVPVQSQLEGALQGLHHLGPG*VPVECG
Trigger: TCCACACTCTACAGGGACCCAGCCTGGTCCCAGGTG...GTGGAGACCTTGAAGTGCGCCCTCCAGCTGGCTCTGGACCGGCACCAGGCTCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR CCA 90 bp CTCAACAAGGAGGCCCCAGAGGTCGATGAGGGACACGCTGTGGCCACTGCGCTCATGAGGGACACGCTGTaGCCACTGCGCTCCCGGACC +
Preference number: 4 (lower is better)
Translates to: LNKEAPEVDEGHAVATALMRDTL*PLRSRT
Trigger: GGTCCGGGAGCGCAGTGGCCACAGCGTGTCCCTCAT...GAGCGCAGTGGCCACAGCGTGTCCCTCATCGACCTCTGGGGCCTCCTTGTTGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR CCA 90 bp TGGCTTCTCGTAGGCTCCAGGCACTGCCAGCTGGAGCTGCCTAGAGCCGTACTCCGCATGGGGGTGAGCTaGTTGGGGAAGGCGTCCGGG +
Preference number: 4 (lower is better)
Translates to: WLLVGSRHCQLELPRAVLRMGVS*LGKASG
Trigger: CCCGGACGCCTTCCCCAACCAGCTCACCCCCATGCG...GAGTACGGCTCTAGGCAGCTCCAGCTGGCAGTGCCTGGAGCCTACGAGAAGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290497.11
CDS-3UTR CCA 90 bp TCGGGTTCCACCCCCGGAACCCAACACAGCCACTACAGGCACCTGGCCACTGTCGGTGGGGTTGGGGCTTaGGCCGCTCTGCAGGAAGTG +
Preference number: 4 (lower is better)
Translates to: SGSTPGTQHSHYRHLATVGGVGA*AALQEV
Trigger: CACTTCCTGCAGAGCGGCCCAAGCCCCAACCCCACC...GACAGTGGCCAGGTGCCTGTAGTGGCTGTGTTGGGTTCCGGGGGTGGAACCCGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR TCA 90 bp GCCCCAGAGGTCGATGAGGGACACGCTGTGGCCACTGCGCTCCCGGACCCCCAGCCTTGTCATAGAGGGTaGGCTCCAGGACGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: APEVDEGHAVATALPDPQPCHRG*APGRSS
Trigger: TGAAGAACGTCCTGGAGCTCACCCTCTATGACAAGG...CTGGGGGTCCGGGAGCGCAGTGGCCACAGCGTGTCCCTCATCGACCTCTGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR TCA 90 bp AGCGGGGGTCCTCAGCCTTGGCAAACAGATAGCACTCACGGGCCTCCTCCATGTGGCCCCAGAGGTCGATaGGGGACACGCTGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: SGGPQPWQTDSTHGPPPCGPRGR*GTRCGH
Trigger: GTGGCCACAGCGTGTCCCTCATCGACCTCTGGGGCC...ACATGGAGGAGGCCCGTGAGTGCTATCTGTTTGCCAAGGCTGAGGACCCCCGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR TCA 90 bp GAGACACGCGCACATCTCCCACCTGGAGCAGCCAGAATGGGACATCACCCCACAACCACTCCAGGAAGCTaGGGCCCGAGCCGGCGGTCT +
Preference number: 4 (lower is better)
Translates to: ETRAHLPPGAARMGHHPTTTPGS*GPSRRS
Trigger: AGACCGCCGGCTCGGGCCTCAGCTTCCTGGAGTGGT...TGTGGGGTGATGTCCCATTCTGGCTGCTCCAGGTGGGAGATGTGCGCGTGTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR TCA 90 bp GCCACACTTGAGGCTTCTCAGGTCAAACAGGAGCAGAGAGAGCTGGTCGCTGCCAGGGCCCCTGTGGGGTaGGGAGCCTCGTTCGCAGCC +
Preference number: 4 (lower is better)
Translates to: ATLEASQVKQEQRELVAARAPVG*GASFAA
Trigger: GGCTGCGAACGAGGCTCCTCACCCCACAGGGGCCCT...GGCAGCGACCAGCTCTCTCTGCTCCTGTTTGACCTGAGAAGCCTCAAGTGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290497.11
CDS-3UTR GCA 90 bp CTCCCACCTGGAGCAGCCAGAATGGGACATCACCCCACAGGCTTTAGGGCGCTGCCCAGCAGGGAACCCTaGCTGCGCTCCTCTGGTTGC +
Preference number: 4 (lower is better)
Translates to: LPPGAARMGHHPTGFRALPSREP*LRSSGC
Trigger: GCAACCAGAGGAGCGCAGGCAGGGTTCCCTGCTGGG...CAGCGCCCTAAAGCCTGTGGGGTGATGTCCCATTCTGGCTGCTCCAGGTGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR GCA 90 bp GAAGGCGTCCGGGTGTGTGTCTTTCCAGGCCACGAACTCCCTGCCAGCCACATAGCGCTGGGGCCACTCTaGACAGCTGCCAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: EGVRVCVFPGHELPASHIALGPL*TAASSS
Trigger: GGAGCTGCTGGCAGCTGTGCAGAGTGGCCCCAGCGC...TATGTGGCTGGCAGGGAGTTCGTGGCCTGGAAAGACACACACCCGGACGCCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR GCA 90 bp GCTGGCTTCTCAGTGCCCTCAGCCCCTGTTCTGTGTGGGTCTGAGGACTTGGGCGAGAGGAGAGCAGGATaGCCCCCTCGCCCAGCTTGC +
Preference number: 4 (lower is better)
Translates to: AGFSVPSAPVLCGSEDLGERRAG*PPRPAC
Trigger: GCAAGCTGGGCGAGGGGGGCATCCTGCTCTCCTCTC...GCCCAAGTCCTCAGACCCACACAGAACAGGGGCTGAGGGCACTGAGAAGCCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR GCA 90 bp CCAGAGGTCGATGAGGGACACGCTGTGGCCACTGCGCTCCCGGACCCCCAGTTCAATCCCAGCACTTGCTaGAGGGCCTTGGACACGACC +
Preference number: 4 (lower is better)
Translates to: PEVDEGHAVATALPDPQFNPSTC*RALDTT
Trigger: GGTCGTGTCCAAGGCCCTGCAGCAAGTGCTGGGATT...GAACTGGGGGTCCGGGAGCGCAGTGGCCACAGCGTGTCCCTCATCGACCTCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR GCA 90 bp TCGCTCCACACCTGGGGCCAGGTGTGTGCGGAAGGTACGGTTAACCAGGGGGAAACACGCTGTGGCCACTaGGCTCCCGGACCCCCAGTT +
Preference number: 4 (lower is better)
Translates to: SLHTWGQVCAEGTVNQGETRCGH*APGPPV
Trigger: AACTGGGGGTCCGGGAGCGCAGTGGCCACAGCGTGT...TTCCCCCTGGTTAACCGTACCTTCCGCACACACCTGGCCCCAGGTGTGGAGCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR GCA 90 bp GGCCACTGTCCAGAGCCTCACTCAATCCCAGCACTTGCTGCAGGGCCTTGGACACTCTCCCGAGCCTGGTaGCGGTCCAGAGCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: GHCPEPHSIPALAAGPWTLSRAW*RSRASW
Trigger: CCAGCTGGCTCTGGACCGGCACCAGGCTCGGGAGAG...TGTCCAAGGCCCTGCAGCAAGTGCTGGGATTGAGTGAGGCTCTGGACAGTGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR GCA 90 bp GGTCCAGAGCCAGCTGGAGGGCGCACTTCAAGGTCTCCACGTTGTTCAGGACGTCCTTGGTCAGGCCCCTaGCCTCTCCCGAGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: GPEPAGGRTSRSPRCSGRPWSGP*PLPSLV
Trigger: CACCAGGCTCGGGAGAGGGCAGGGGCCTGACCAAGG...ACGTCCTGAACAACGTGGAGACCTTGAAGTGCGCCCTCCAGCTGGCTCTGGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000562320.1
ENST00000569985.5
CDS-3UTR GCA 90 bp GGGGTTGGGGCTTGGGCCGCTCTGCAGGAAGTGTGGATGGATGCATCTCTGCTTGTTTCCCGCCGCCAGTaGCTCCACAGAGGGCCCCTC +
Preference number: 4 (lower is better)
Translates to: GVGAWAALQEVWMDASLLVSRRQ*LHRGPL
Trigger: GAGGGGCCCTCTGTGGAGGCACTGGCGGCGGGAAAC...AAGCAGAGATGCATCCATCCACACTTCCTGCAGAGCGGCCCAAGCCCCAACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397272.7
ENST00000569985.5
CDS-3UTR GCA 90 bp GAGCCGTACTCTTCCCGTGGGGCTGTCCCATCTCCCCGGAGCGTGCCCTGGATTTGGACAGCAGGTCTGTaGCCCGGATGTTTGTGGCCC +
Preference number: 4 (lower is better)
Translates to: EPYSSRGAVPSPRSVPWIWTAGL*PGCLWP
Trigger: GGGCCACAAACATCCGGGGCACAGACCTGCTGTCCA...AATCCAGGGCACGCTCCGGGGAGATGGGACAGCCCCACGGGAAGAGTACGGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561627.5
CDS-3UTR CCA 90 bp GAGACACGCGCACATCTCCCACCTGGAGCAGCCAGAATGGGACATCACCCCACAAGAGTGCCCAAAGCATaGCTGGGCAGCCCGGGCCCC +
Preference number: 4 (lower is better)
Translates to: ETRAHLPPGAARMGHHPTRVPKA*LGSPGP
Trigger: GGGGCCCGGGCTGCCCAGCCATGCTTTGGGCACTCT...TGTGGGGTGATGTCCCATTCTGGCTGCTCCAGGTGGGAGATGTGCGCGTGTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR CCA 90 bp CTGCCTAGAGCCGTACTCTTCCCGTGGGGCTGTCCCATCTCCCCGGAGCGTGCCGTCTGCCAGCCACCTTaGCCAGAGTGCCCAAAGCAT +
Preference number: 4 (lower is better)
Translates to: LPRAVLFPWGCPISPERAVCQPP*PECPKH
Trigger: ATGCTTTGGGCACTCTGGCCAAGGTGGCTGGCAGAC...GGCACGCTCCGGGGAGATGGGACAGCCCCACGGGAAGAGTACGGCTCTAGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000561627.5
CDS-3UTR CCA 90 bp GGTCCAGAGCCAGCTGGAGGGCGCACTTCAAGGTCTCCACGTTGTTCAGGACGTAGTCTGGGCAGGGCTTaGGGACGCCGTGGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: GPEPAGGRTSRSPRCSGRSLGRA*GRRGQP
Trigger: TGGCTGCCCACGGCGTCCCCAAGCCCTGCCCAGACT...ACGTCCTGAACAACGTGGAGACCTTGAAGTGCGCCCTCCAGCTGGCTCTGGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR CCA 90 bp CTCCCACCTGGAGCAGCCAGAATGGGACATCACCCCACAGGCTTTAGGGCGCTGGCCGTACTCTTCCCGTaGGGCTGTCCCATCTCCCCG +
Preference number: 4 (lower is better)
Translates to: LPPGAARMGHHPTGFRALAVLFP*GCPISP
Trigger: CGGGGAGATGGGACAGCCCCACGGGAAGAGTACGGC...CAGCGCCCTAAAGCCTGTGGGGTGATGTCCCATTCTGGCTGCTCCAGGTGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000397272.7
CDS-3UTR CCA 90 bp TCGGGTTCCACCCCCGGAACCCAACACAGCCACTACAGGCACCTGGCCACTGTCCCTCCAACTCTGCGCTaGGGCCACTCTGCACAGCTG +
Preference number: 4 (lower is better)
Translates to: SGSTPGTQHSHYRHLATVPPTLR*GHSAQL
Trigger: CAGCTGTGCAGAGTGGCCCCAGCGCAGAGTTGGAGG...GACAGTGGCCAGGTGCCTGTAGTGGCTGTGTTGGGTTCCGGGGGTGGAACCCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR CCA 90 bp TGGTGCCGGTCCAGAGCCAGCTGGAGGGCGCACTTCAAGGTCTCCACGTTGTTCGGAGAAGGGCCCCTGTaGGGTGAGGAGCCTCGTTCG +
Preference number: 4 (lower is better)
Translates to: WCRSRASWRAHFKVSTLFGEGPL*GEEPRS
Trigger: CGAACGAGGCTCCTCACCCCACAGGGGCCCTTCTCC...GAACAACGTGGAGACCTTGAAGTGCGCCCTCCAGCTGGCTCTGGACCGGCACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000562320.1
ENST00000569985.5
CDS-3UTR CCA 90 bp GGGGTCCTCAGCCTTGGCAAACAGATAGCACTCACGGGCCTCCTCCATGTCCTCGAGCTTTCCGGGGCCTaGGGCACCTCGAGGCAGGTC +
Preference number: 4 (lower is better)
Translates to: GVLSLGKQIALTGLLHVLELSGA*GTSRQV
Trigger: GACCTGCCTCGAGGTGCCCCAGGCCCCGGAAAGCTC...GAGGACATGGAGGAGGCCCGTGAGTGCTATCTGTTTGCCAAGGCTGAGGACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000562320.1
ENST00000569985.5
CDS-3UTR CCA 90 bp GGGGTTGGGGCTTGGGCCGCTCTGCAGGAAGTGTGGATGGATGCATCTCTGCTTGAGCTTTCCGGGGCCTaGGGCACCTCGAGGCAGGTC +
Preference number: 4 (lower is better)
Translates to: GVGAWAALQEVWMDASLLELSGA*GTSRQV
Trigger: GACCTGCCTCGAGGTGCCCCAGGCCCCGGAAAGCTC...AAGCAGAGATGCATCCATCCACACTTCCTGCAGAGCGGCCCAAGCCCCAACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
CDS-3UTR CCA 90 bp ACGCGCACATCTCCCACCTGGAGCAGCCAGAATGGGACATCACCCCACAGGCTTTGCGGGGACAGACGCTaGCCTCTGCAACCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: TRTSPTWSSQNGTSPHRLCGDRR*PLQPWG
Trigger: GCCCCAGGGTTGCAGAGGCCAGCGTCTGTCCCCGCA...AAGCCTGTGGGGTGATGTCCCATTCTGGCTGCTCCAGGTGGGAGATGTGCGCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR CCA 90 bp TCCACACCTGGGGCCAGGTGTGTGCGGAAGGTACGGTTAACCAGGGGGAAGTGCGGCGTACTCTTCCCGTaGGGCTGTCCCATCTCCCCG +
Preference number: 4 (lower is better)
Translates to: STPGARCVRKVRLTRGKCGVLFP*GCPISP
Trigger: CGGGGAGATGGGACAGCCCCACGGGAAGAGTACGCC...GCACTTCCCCCTGGTTAACCGTACCTTCCGCACACACCTGGCCCCAGGTGTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000569985.5
CDS-3UTR TCA 90 bp GTGGCATTGCCTACACTTCTGTGTGAGAAGGTCCCCGCCCACTCTGCACAAGCCGGCCCCAGAGGTCGATaGGGGACACGCTGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: VALPTLLCEKVPAHSAQAGPRGR*GTRCGH
Trigger: GTGGCCACAGCGTGTCCCTCATCGACCTCTGGGGCC...GGCTTGTGCAGAGTGGGCGGGGACCTTCTCACACAGAAGTGTAGGCAATGCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR TCA 90 bp TACCACTCCAGGAAGCTGAGGCCCGAGCCGGCGGTCTTTAGGAAGATCTCATCCGGCCCCAGAGGTCGATaGGGGACACGCTGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: YHSRKLRPEPAVFRKISSGPRGR*GTRCGH
Trigger: GTGGCCACAGCGTGTCCCTCATCGACCTCTGGGGCC...GGATGAGATCTTCCTAAAGACCGCCGGCTCGGGCCTCAGCTTCCTGGAGTGGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR TCA 90 bp CAGCTCAGCACTGGAGGCATATGCTGCAGAGGCCGTGGCCAGATGGAGAGGGCCGCCTACACTTCTGTGTaGGAAGGTCCCCGCCCACTC +
Preference number: 4 (lower is better)
Translates to: QLSTGGICCRGRGQMERAAYTSV*EGPRPL
Trigger: GAGTGGGCGGGGACCTTCTCACACAGAAGTGTAGGC...GGCCCTCTCCATCTGGCCACGGCCTCTGCAGCATATGCCTCCAGTGCTGAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR GCA 90 bp AGTCTGGGCAGGGCTTGGGGACGCCGTGGGCAGCCACAGTTGCACATAGCAGTCGCAGGGAACCCTGCCTaGGCTCCTCTGGTTGCACAA +
Preference number: 4 (lower is better)
Translates to: SLGRAWGRRGQPQLHIAVAGNPA*APLVAQ
Trigger: TTGTGCAACCAGAGGAGCGCAGGCAGGGTTCCCTGC...GACTGCTATGTGCAACTGTGGCTGCCCACGGCGTCCCCAAGCCCTGCCCAGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565553.1
CDS-3UTR GCA 90 bp GAGCTGTGGCTTCTCGTAGGCTCCAGGCACTGCCAGCTGGAGCTGCCTAGAGCCCCACCTTGGCCAGAGTaGCCAAAGCATGGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: ELWLLVGSRHCQLELPRAPPWPE*PKHGWA
Trigger: TGCCCAGCCATGCTTTGGGCACTCTGGCCAAGGTGG...GGCTCTAGGCAGCTCCAGCTGGCAGTGCCTGGAGCCTACGAGAAGCCACAGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000561627.5
CDS-3UTR GCA 90 bp AGTCTGGGCAGGGCTTGGGGACGCCGTGGGCAGCCACAGTTGCACATAGCAGTCGGGCAGCATCTTGTCTaGCAGCCACCTTGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: SLGRAWGRRGQPQLHIAVGQHLV*QPPWPE
Trigger: CTCTGGCCAAGGTGGCTGGCAGACAAGATGCTGCCC...GACTGCTATGTGCAACTGTGGCTGCCCACGGCGTCCCCAAGCCCTGCCCAGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565553.1
CDS-3UTR GCA 90 bp ACAAGGAGAGCCCTGCCCCAGTCCAAGCTGCAATTCTGCAAGAGCTTTCCGGGGCTCTCCCGAGCCTGGTaGCGGTCCAGAGCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: TRRALPQSKLQFCKSFPGLSRAW*RSRASW
Trigger: CCAGCTGGCTCTGGACCGGCACCAGGCTCGGGAGAG...CCCCGGAAAGCTCTTGCAGAATTGCAGCTTGGACTGGGGCAGGGCTCTCCTTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
CDS-3UTR GCA 90 bp CCAGAGGTCGATGAGGGACACGCTGTGGCCACTGCGCTCCCGGACCCCCAGTTCAAGGGAAGCAGATCCTaGACAGAGTCCCCATCGCTC +
Preference number: 4 (lower is better)
Translates to: PEVDEGHAVATALPDPQFKGSRS*TESPSL
Trigger: GAGCGATGGGGACTCTGTGCAGGATCTGCTTCCCTT...GAACTGGGGGTCCGGGAGCGCAGTGGCCACAGCGTGTCCCTCATCGACCTCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR GCA 90 bp TCTGGGCAGGGCTTGGGGACGCCGTGGGCAGCCACAGTTGCACATAGCAGTCGGCTGCGCTCCTCTGGTTaGACAAACTGCTGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: SGQGLGTPWAATVAHSSRLRSSG*TNCWLR
Trigger: CCTGAGCCAGCAGTTTGTGCAACCAGAGGAGCGCAG...CCGACTGCTATGTGCAACTGTGGCTGCCCACGGCGTCCCCAAGCCCTGCCCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565553.1
CDS-3UTR GCA 90 bp ACGCGCACATCTCCCACCTGGAGCAGCCAGAATGGGACATCACCCCACAGGCTTCAAGCCTTGCTGGCCTaGGGGGACAGACGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: TRTSPTWSSQNGTSPHRLQALLA*GDRRWP
Trigger: AGGCCAGCGTCTGTCCCCGCAGGCCAGCAAGGCTTG...AAGCCTGTGGGGTGATGTCCCATTCTGGCTGCTCCAGGTGGGAGATGTGCGCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR CCA 90 bp TGGCTTCTCGTAGGCTCCAGGCACTGCCAGCTGGAGCTGCCTAGAGCCGTACTCGGCTTGGGGACGCCGTaGGCAGCCACAGTTGCACAT +
Preference number: 4 (lower is better)
Translates to: WLLVGSRHCQLELPRAVLGLGTP*AATVAH
Trigger: ATGTGCAACTGTGGCTGCCCACGGCGTCCCCAAGCC...GAGTACGGCTCTAGGCAGCTCCAGCTGGCAGTGCCTGGAGCCTACGAGAAGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000561627.5
CDS-3UTR CCA 90 bp CTGTGGCTTCTCGTAGGCTCCAGGCACTGCCAGCTGGAGCTGCCTAGAGCCGTAGGCTTGGGGACGCCGTaGGCAGCCACAGTTGCACAT +
Preference number: 4 (lower is better)
Translates to: LWLLVGSRHCQLELPRAVGLGTP*AATVAH
Trigger: ATGTGCAACTGTGGCTGCCCACGGCGTCCCCAAGCC...TACGGCTCTAGGCAGCTCCAGCTGGCAGTGCCTGGAGCCTACGAGAAGCCACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000561627.5
CDS-3UTR CCA 90 bp TGGGGACGCCGTGGGCAGCCACAGTTGCACATAGCAGTCGGCTTTGGACACTGCGGCTTGGGGACGCCGTaGGCAGCCACAGTTGCACAT +
Preference number: 4 (lower is better)
Translates to: WGRRGQPQLHIAVGFGHCGLGTP*AATVAH
Trigger: ATGTGCAACTGTGGCTGCCCACGGCGTCCCCAAGCC...GCAGTGTCCAAAGCCGACTGCTATGTGCAACTGTGGCTGCCCACGGCGTCCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565553.1
CDS-3UTR CCA 90 bp GTGGCATTGCCTACACTTCTGTGTGAGAAGGTCCCCGCCCACTCTGCACAAGCCAGTCTGGGCAGGGCTTaGGGACGCCGTGGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: VALPTLLCEKVPAHSAQASLGRA*GRRGQP
Trigger: TGGCTGCCCACGGCGTCCCCAAGCCCTGCCCAGACT...GGCTTGTGCAGAGTGGGCGGGGACCTTCTCACACAGAAGTGTAGGCAATGCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR CCA 90 bp CTCATTCCACTCGGGGTCACTGCAGTTGGCCACTATCCTAGTCTGGGCAGGGCTAGTCTGGGCAGGGCTTaGGGACGCCGTGGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: LIPLGVTAVGHYPSLGRASLGRA*GRRGQP
Trigger: TGGCTGCCCACGGCGTCCCCAAGCCCTGCCCAGACT...AGCCCTGCCCAGACTAGGATAGTGGCCAACTGCAGTGACCCCGAGTGGAATGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565553.1
CDS-3UTR CCA 90 bp GAGGCCCCAGAGGTCGATGAGGGACACGCTGTGGCCACTGCGCTCCCGGACCCCAGCTCTTGTGAATCCTaGTGGTTGAGTGGGAAGGTG +
Preference number: 4 (lower is better)
Translates to: EAPEVDEGHAVATALPDPSSCES*WLSGKV
Trigger: CACCTTCCCACTCAACCACCAGGATTCACAAGAGCT...GGGGTCCGGGAGCGCAGTGGCCACAGCGTGTCCCTCATCGACCTCTGGGGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR CCA 90 bp GAGCTGTGGCTTCTCGTAGGCTCCAGGCACTGCCAGCTGGAGCTGCCTAGAGCCGCCACTACAGGCACCTaGCCACTGTCCAGAGCCTCA +
Preference number: 4 (lower is better)
Translates to: ELWLLVGSRHCQLELPRAATTGT*PLSRAS
Trigger: TGAGGCTCTGGACAGTGGCCAGGTGCCTGTAGTGGC...GGCTCTAGGCAGCTCCAGCTGGCAGTGCCTGGAGCCTACGAGAAGCCACAGCTC
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290497.11
CDS-3UTR CCA 90 bp CAAATAACTGGCTCCCCCAGCCCTCGCAACTCATGCCAGCTGGAGGGCTGCAGACCTGGGCACGCTCAATaGGGCCCTGCAAGGCCACCT +
Preference number: 4 (lower is better)
Translates to: QITGSPSPRNSCQLEGCRPGHAQ*GPARPP
Trigger: AGGTGGCCTTGCAGGGCCCCATTGAGCGTGCCCAGG...TCTGCAGCCCTCCAGCTGGCATGAGTTGCGAGGGCTGGGGGAGCCAGTTATTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR CCA 90 bp CTCCCACCTGGAGCAGCCAGAATGGGACATCACCCCACAGGCTTTAGGGCGCTGCGGACCGCCTCCTGTTaGTCAGACAGCTTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: LPPGAARMGHHPTGFRALRTASC*SDSLAG
Trigger: CCCTGCCAAGCTGTCTGACCAACAGGAGGCGGTCCG...CAGCGCCCTAAAGCCTGTGGGGTGATGTCCCATTCTGGCTGCTCCAGGTGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR CCA 90 bp CAGCACAATGGGGGAGCGGGGGTCCTCAGCCTTGGCAAACAGATAGCACTCACGGGAGAAGGGCCCCTGTaGGGTGAGGAGCCTCGTTCG +
Preference number: 4 (lower is better)
Translates to: QHNGGAGVLSLGKQIALTGEGPL*GEEPRS
Trigger: CGAACGAGGCTCCTCACCCCACAGGGGCCCTTCTCC...CGTGAGTGCTATCTGTTTGCCAAGGCTGAGGACCCCCGCTCCCCCATTGTGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000562320.1
ENST00000569985.5
CDS-3UTR CCA 90 bp AGCCCAAATAACTGGCTCCCCCAGCCCTCGCAACTCATGCCAGCTGGAGGGCTGCGGTCCAGAGCCAGCTaGAGGGCGCACTTCAAGGTC +
Preference number: 4 (lower is better)
Translates to: SPNNWLPQPSQLMPAGGLRSRAS*RAHFKV
Trigger: GACCTTGAAGTGCGCCCTCCAGCTGGCTCTGGACCG...CAGCCCTCCAGCTGGCATGAGTTGCGAGGGCTGGGGGAGCCAGTTATTTGGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR CCA 90 bp TCCACACCTGGGGCCAGGTGTGTGCGGAAGGTACGGTTAACCAGGGGGAAGTGCCGGTCCAGAGCCAGCTaGAGGGCGCACTTCAAGGTC +
Preference number: 4 (lower is better)
Translates to: STPGARCVRKVRLTRGKCRSRAS*RAHFKV
Trigger: GACCTTGAAGTGCGCCCTCCAGCTGGCTCTGGACCG...GCACTTCCCCCTGGTTAACCGTACCTTCCGCACACACCTGGCCCCAGGTGTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000562320.1
ENST00000569985.5
CDS-3UTR CCA 90 bp CTAGAGCCGTACTCTTCCCGTGGGGCTGTCCCATCTCCCCGGAGCGTGCCCTGGTGTAAGGAGGACAGCTaGCTTCTCAGTGCCCTCAGC +
Preference number: 4 (lower is better)
Translates to: LEPYSSRGAVPSPRSVPWCKEDS*LLSALS
Trigger: GCTGAGGGCACTGAGAAGCCAGCTGTCCTCCTTACA...CCAGGGCACGCTCCGGGGAGATGGGACAGCCCCACGGGAAGAGTACGGCTCTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290497.11
CDS-3UTR CCA 90 bp GAGACACGCGCACATCTCCCACCTGGAGCAGCCAGAATGGGACATCACCCCACAGGTGGGGTTGGGGCTTaGGCCGCTCTGCAGGAAGTG +
Preference number: 4 (lower is better)
Translates to: ETRAHLPPGAARMGHHPTGGVGA*AALQEV
Trigger: CACTTCCTGCAGAGCGGCCCAAGCCCCAACCCCACC...TGTGGGGTGATGTCCCATTCTGGCTGCTCCAGGTGGGAGATGTGCGCGTGTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
CDS-3UTR CCA 90 bp CTGCCTAGAGCCGTACTCTTCCCGTGGGGCTGTCCCATCTCCCCGGAGCGTGCCCTGGAGGTCATAGTATaGGTAGGTTTCCCGCCGCCA +
Preference number: 4 (lower is better)
Translates to: LPRAVLFPWGCPISPERALEVIV*VGFPPP
Trigger: TGGCGGCGGGAAACCTACCCATACTATGACCTCCAG...GGCACGCTCCGGGGAGATGGGACAGCCCCACGGGAAGAGTACGGCTCTAGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561627.5
CDS-3UTR CCA 90 bp GAGCCGTACTCTTCCCGTGGGGCTGTCCCATCTCCCCGGAGCGTGCCCTGGATTTGCCCCGGATGTTTGTaGCCCTCAGCACCTTCACCT +
Preference number: 4 (lower is better)
Translates to: EPYSSRGAVPSPRSVPWICPGCL*PSAPSP
Trigger: AGGTGAAGGTGCTGAGGGCCACAAACATCCGGGGCA...AATCCAGGGCACGCTCCGGGGAGATGGGACAGCCCCACGGGAAGAGTACGGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000561627.5
CDS-3UTR CCA 90 bp GAGCCGTACTCTTCCCGTGGGGCTGTCCCATCTCCCCGGAGCGTGCCCTGGATTCATAGCAGTCGGCTTTaGACAGCAGGTCTGTGCCCC +
Preference number: 4 (lower is better)
Translates to: EPYSSRGAVPSPRSVPWIHSSRL*TAGLCP
Trigger: GGGGCACAGACCTGCTGTCCAAAGCCGACTGCTATG...AATCCAGGGCACGCTCCGGGGAGATGGGACAGCCCCACGGGAAGAGTACGGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561627.5
CDS-3UTR CCA 90 bp GAGACACGCGCACATCTCCCACCTGGAGCAGCCAGAATGGGACATCACCCCACACAAGGGGAGGGGCCGTaGCCTGTGACAGGCAGCCAT +
Preference number: 4 (lower is better)
Translates to: ETRAHLPPGAARMGHHPTQGEGP*PVTGSH
Trigger: ATGGCTGCCTGTCACAGGCCACGGCCCCTCCCCTTG...TGTGGGGTGATGTCCCATTCTGGCTGCTCCAGGTGGGAGATGTGCGCGTGTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR TCA 90 bp CATCCCCTCAGCCCCTCATTGTTCTTGATAGCAGTGCATCCAGGAGCTCGAGGTAGGGCCCCTGTGGGGTaGGGAGCCTCGTTCGCAGCC +
Preference number: 4 (lower is better)
Translates to: HPLSPSLFLIAVHPGARGRAPVG*GASFAA
Trigger: GGCTGCGAACGAGGCTCCTCACCCCACAGGGGCCCT...ACCTCGAGCTCCTGGATGCACTGCTATCAAGAACAATGAGGGGCTGAGGGGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
CDS-3UTR TCA 90 bp CCAGAGGTCGATGAGGGACACGCTGTGGCCACTGCGCTCCCGGACCCCCAGTTCCCTGGGGCTCATAGGTaGAGTTCATCATGCCATAGG +
Preference number: 4 (lower is better)
Translates to: PEVDEGHAVATALPDPQFPGAHR*SSSCHR
Trigger: CCTATGGCATGATGAACTTCACCTATGAGCCCCAGG...GAACTGGGGGTCCGGGAGCGCAGTGGCCACAGCGTGTCCCTCATCGACCTCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR TCA 90 bp GCTGGCTTCTCAGTGCCCTCAGCCCCTGTTCTGTGTGGGTCTGAGGACTTGGGCAGGACTTGGGCCCTCTaGGGTCCTTCTGTGTCTGGG +
Preference number: 4 (lower is better)
Translates to: AGFSVPSAPVLCGSEDLGRTWAL*GPSVSG
Trigger: CCCAGACACAGAAGGACCTCAGAGGGCCCAAGTCCT...GCCCAAGTCCTCAGACCCACACAGAACAGGGGCTGAGGGCACTGAGAAGCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
CDS-3UTR GCA 90 bp AGCGGGGGTCCTCAGCCTTGGCAAACAGATAGCACTCACGGGCCTCCTCCATGTTTTGGACACCGCCAGTaGCTCCACAGAGGGCCCCTC +
Preference number: 4 (lower is better)
Translates to: SGGPQPWQTDSTHGPPPCFGHRQ*LHRGPL
Trigger: GAGGGGCCCTCTGTGGAGGCACTGGCGGTGTCCAAA...ACATGGAGGAGGCCCGTGAGTGCTATCTGTTTGCCAAGGCTGAGGACCCCCGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000290497.11
CDS-3UTR GCA 90 bp GAGCTGTGGCTTCTCGTAGGCTCCAGGCACTGCCAGCTGGAGCTGCCTAGAGCCACTGCCAGCTGGAGCTaGCTAGAGCCGTACTCTTCC +
Preference number: 4 (lower is better)
Translates to: ELWLLVGSRHCQLELPRATASWS*LEPYSS
Trigger: GGAAGAGTACGGCTCTAGGCAGCTCCAGCTGGCAGT...GGCTCTAGGCAGCTCCAGCTGGCAGTGCCTGGAGCCTACGAGAAGCCACAGCTC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000561627.5
CDS-3UTR GCA 90 bp ACAGAGTCCCCATCGCTCCTCCCTCTACAAGCCCTGACCATGAGCAGTGTGTCTGCGCTGGGGCCACTCTaGACAGCTGCCAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: TESPSLLPLQALTMSSVSALGPL*TAASSS
Trigger: GGAGCTGCTGGCAGCTGTGCAGAGTGGCCCCAGCGC...AGACACACTGCTCATGGTCAGGGCTTGTAGAGGGAGGAGCGATGGGGACTCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR GCA 90 bp GAAGTGAAGCGGGAGGTGAATATGTCCAGCACAGCCTGGGAGAAGGGCCCCTGTCGCTCAATGGGGCCCTaGAAGGCCACCTGGGACCAG +
Preference number: 4 (lower is better)
Translates to: EVKREVNMSSTAWEKGPCRSMGP*KATWDQ
Trigger: CTGGTCCCAGGTGGCCTTGCAGGGCCCCATTGAGCG...ACAGGGGCCCTTCTCCCAGGCTGTGCTGGACATATTCACCTCCCGCTTCACTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR GCA 90 bp CAGCTCAGCACTGGAGGCATATGCTGCAGAGGCCGTGGCCAGATGGAGAGGGCCTTAACCAGGGGGAAGTaGAGCACAATGGGGGAGCGG +
Preference number: 4 (lower is better)
Translates to: QLSTGGICCRGRGQMERALTRGK*STMGER
Trigger: CCGCTCCCCCATTGTGCTGCACTTCCCCCTGGTTAA...GGCCCTCTCCATCTGGCCACGGCCTCTGCAGCATATGCCTCCAGTGCTGAGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR GCA 90 bp TTGCCTACACTTCTGTGTGAGAAGGTCCCCGCCCACTCTGCACAAGCCCACGTTCCTTGGTCAGGCCCCTaGCCTCTCCCGAGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: LPTLLCEKVPAHSAQAHVPWSGP*PLPSLV
Trigger: CACCAGGCTCGGGAGAGGGCAGGGGCCTGACCAAGG...AACGTGGGCTTGTGCAGAGTGGGCGGGGACCTTCTCACACAGAAGTGTAGGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR GCA 90 bp AGCCCAAATAACTGGCTCCCCCAGCCCTCGCAACTCATGCCAGCTGGAGGGCTGGGGCTTGGGCCGCTCTaGAGGAAGTGTGGATGGATG +
Preference number: 4 (lower is better)
Translates to: SPNNWLPQPSQLMPAGGLGLGPL*RKCGWM
Trigger: CATCCATCCACACTTCCTGCAGAGCGGCCCAAGCCC...CAGCCCTCCAGCTGGCATGAGTTGCGAGGGCTGGGGGAGCCAGTTATTTGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR GCA 90 bp CTCCCACCTGGAGCAGCCAGAATGGGACATCACCCCACAGGCTTTAGGGCGCTGAGCACTGGAGGCATATaGTGCAGAGGCCGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: LPPGAARMGHHPTGFRALSTGGI*CRGRGQ
Trigger: CTGGCCACGGCCTCTGCAGCATATGCCTCCAGTGCT...CAGCGCCCTAAAGCCTGTGGGGTGATGTCCCATTCTGGCTGCTCCAGGTGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR CCA 90 bp CAAGAGCTGTGGCTTCTCGTAGGCTCCAGGCACTGCCAGCTGGAGCTGCCTAGACCAGGCACTGCCAGCTaGAGCTGCCTAGAGCCGTAC +
Preference number: 4 (lower is better)
Translates to: QELWLLVGSRHCQLELPRPGTAS*SCLEPY
Trigger: GTACGGCTCTAGGCAGCTCCAGCTGGCAGTGCCTGG...TCTAGGCAGCTCCAGCTGGCAGTGCCTGGAGCCTACGAGAAGCCACAGCTCTTG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000561627.5
CDS-3UTR CCA 90 bp ACTGGTGTAAATGGGGTAAGGGTTCTGACCCTGGCGGACCGCCTCCTGTTGGTCGGAGGCCTGGCTCTGTaGGAGGCTGCAGGGGCAAGA +
Preference number: 4 (lower is better)
Translates to: TGVNGVRVLTLADRLLLVGGLAL*EAAGAR
Trigger: TCTTGCCCCTGCAGCCTCCCACAGAGCCAGGCCTCC...GACCAACAGGAGGCGGTCCGCCAGGGTCAGAACCCTTACCCCATTTACACCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290497.11
CDS-3UTR CCA 90 bp TGTGAGAAGGTCCCCGCCCACTCTGCACAAGCCCACGTTTGCCTCCTTCACAAGGGAGGCCTGGCTCTGTaGGAGGCTGCAGGGGCAAGA +
Preference number: 4 (lower is better)
Translates to: CEKVPAHSAQAHVCLLHKGGLAL*EAAGAR
Trigger: TCTTGCCCCTGCAGCCTCCCACAGAGCCAGGCCTCC...CTTGTGAAGGAGGCAAACGTGGGCTTGTGCAGAGTGGGCGGGGACCTTCTCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR CCA 90 bp TCCTCCATGTCCTCAGGGCCCACCTCGATGCTAGGGAAGGGGATTCCTCGGTCCCCTCGCCCAGCTTGCTaGTCTGAGCCTCCAACTCTG +
Preference number: 4 (lower is better)
Translates to: SSMSSGPTSMLGKGIPRSPRPAC*SEPPTL
Trigger: CAGAGTTGGAGGCTCAGACCAGCAAGCTGGGCGAGG...GGACCGAGGAATCCCCTTCCCTAGCATCGAGGTGGGCCCTGAGGACATGGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR CCA 90 bp GCTGGCTTCTCAGTGCCCTCAGCCCCTGTTCTGTGTGGGTCTGAGGACTTGGGCCCTCGCCCAGCTTGCTaGTCTGAGCCTCCAACTCTG +
Preference number: 4 (lower is better)
Translates to: AGFSVPSAPVLCGSEDLGPRPAC*SEPPTL
Trigger: CAGAGTTGGAGGCTCAGACCAGCAAGCTGGGCGAGG...GCCCAAGTCCTCAGACCCACACAGAACAGGGGCTGAGGGCACTGAGAAGCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR CCA 90 bp AGAGTCCCCATCGCTCCTCCCTCTACAAGCCCTGACCATGAGCAGTGTGTCTCCCCTGGGCACGCTCAATaGGGCCCTGCAAGGCCACCT +
Preference number: 4 (lower is better)
Translates to: RVPIAPPSTSPDHEQCVSPGHAQ*GPARPP
Trigger: AGGTGGCCTTGCAGGGCCCCATTGAGCGTGCCCAGG...GGAGACACACTGCTCATGGTCAGGGCTTGTAGAGGGAGGAGCGATGGGGACTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR CCA 90 bp ACGCGCACATCTCCCACCTGGAGCAGCCAGAATGGGACATCACCCCACAGGCTTGGAAGTGCAGCACAATaGGGGAGCGGGGGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: TRTSPTWSSQNGTSPHRLGSAAQ*GSGGPQ
Trigger: CTGAGGACCCCCGCTCCCCCATTGTGCTGCACTTCC...AAGCCTGTGGGGTGATGTCCCATTCTGGCTGCTCCAGGTGGGAGATGTGCGCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
CDS-3UTR CCA 90 bp GGTAGGTCACAGTGTCTAGAAGGCCGAGCTCCTGCAACCCTGCCAGGCTGCCGTTTGTCGCTCCACACCTaGGGCCAGGTGTGTGCGGAA +
Preference number: 4 (lower is better)
Translates to: GRSQCLEGRAPATLPGCRLSLHT*GQVCAE
Trigger: TTCCGCACACACCTGGCCCCAGGTGTGGAGCGACAA...ACGGCAGCCTGGCAGGGTTGCAGGAGCTCGGCCTTCTAGACACTGTGACCTACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR CCA 90 bp GGGGTCCTCAGCCTTGGCAAACAGATAGCACTCACGGGCCTCCTCCATGTCCTCCGGTCCAGAGCCAGCTaGAGGGCGCACTTCAAGGTC +
Preference number: 4 (lower is better)
Translates to: GVLSLGKQIALTGLLHVLRSRAS*RAHFKV
Trigger: GACCTTGAAGTGCGCCCTCCAGCTGGCTCTGGACCG...GAGGACATGGAGGAGGCCCGTGAGTGCTATCTGTTTGCCAAGGCTGAGGACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000562320.1
ENST00000569985.5
CDS-3UTR CCA 90 bp TTCAAGGTCTCCACGTTGTTCAGGACGTTGTATCGACTGAGGGCCACCAGCCGAGCCCTCTCCCGAGCCTaGTGCCGGTCCAGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: FKVSTLFRTLYRLRATSRALSRA*CRSRAS
Trigger: GCTGGCTCTGGACCGGCACCAGGCTCGGGAGAGGGC...TCGGCTGGTGGCCCTCAGTCGATACAACGTCCTGAACAACGTGGAGACCTTGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000562320.1
ENST00000569985.5
CDS-3UTR CCA 90 bp AGGGCTGCCCACACTAGAGAGGTTCTAGGTATTTGGAGAGTCCCTGGCGGGTCAGAGCTTTCCGGGGCCTaGGGCACCTCGAGGCAGGTC +
Preference number: 4 (lower is better)
Translates to: RAAHTREVLGIWRVPGGSELSGA*GTSRQV
Trigger: GACCTGCCTCGAGGTGCCCCAGGCCCCGGAAAGCTC...TGACCCGCCAGGGACTCTCCAAATACCTAGAACCTCTCTAGTGTGGGCAGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR CCA 90 bp CAGATCCTGCACAGAGTCCCCATCGCTCCTCCCTCTACAAGCCCTGACCATGAGGGTGGGGTTGGGGCTTaGGCCGCTCTGCAGGAAGTG +
Preference number: 4 (lower is better)
Translates to: QILHRVPIAPPSTSPDHEGGVGA*AALQEV
Trigger: CACTTCCTGCAGAGCGGCCCAAGCCCCAACCCCACC...CTCATGGTCAGGGCTTGTAGAGGGAGGAGCGATGGGGACTCTGTGCAGGATCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
CDS-3UTR CCA 90 bp GAGCCCTGCCCCAGTCCAAGCTGCAATTCTGCAAGAGCTTTCCGGGGCCTGGGGCTGCCTGCGCTCCTCTaGTTGCACAAACTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: EPCPSPSCNSARAFRGLGLPALL*LHKLLA
Trigger: AGCCAGCAGTTTGTGCAACCAGAGGAGCGCAGGCAG...CCCCAGGCCCCGGAAAGCTCTTGCAGAATTGCAGCTTGGACTGGGGCAGGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397272.7
ENST00000569985.5
CDS-3UTR CCA 90 bp CACTATCCTAGTCTGGGCAGGGCTTGGGGACGCCGTGGGCAGCCACAGTTGCACCTGCCTGCGCTCCTCTaGTTGCACAAACTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: HYPSLGRAWGRRGQPQLHLPALL*LHKLLA
Trigger: AGCCAGCAGTTTGTGCAACCAGAGGAGCGCAGGCAG...GTGCAACTGTGGCTGCCCACGGCGTCCCCAAGCCCTGCCCAGACTAGGATAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565553.1
CDS-3UTR CCA 90 bp CTGCAACCCTGCCAGGCTGCCGTACAGAGAAGACATGGCTCGGGTTCCACCCCCCATAGCAGTCGGCTTTaGACAGCAGGTCTGTGCCCC +
Preference number: 4 (lower is better)
Translates to: LQPCQAAVQRRHGSGSTPHSSRL*TAGLCP
Trigger: GGGGCACAGACCTGCTGTCCAAAGCCGACTGCTATG...GGGGGTGGAACCCGAGCCATGTCTTCTCTGTACGGCAGCCTGGCAGGGTTGCAG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000569985.5
CDS-3UTR TCA 90 bp CTGGAGGGCGCACTTCAAGGTCTCCACGTTGTTCAGGACGTTGTATCGACTGAGACCACTCCAGGAAGCTaGGGCCCGAGCCGGCGGTCT +
Preference number: 4 (lower is better)
Translates to: LEGALQGLHVVQDVVSTETTPGS*GPSRRS
Trigger: AGACCGCCGGCTCGGGCCTCAGCTTCCTGGAGTGGT...CTCAGTCGATACAACGTCCTGAACAACGTGGAGACCTTGAAGTGCGCCCTCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR TCA 90 bp CCGAGCCTGGTGCCGGTCCAGAGCCAGCTGGAGGGCGCACTTCAAGGTCTCCACTCTGGCAGTCGTCTGTaGTATTCACACTGCCTCTGT +
Preference number: 4 (lower is better)
Translates to: PSLVPVQSQLEGALQGLHSGSRL*YSHCLC
Trigger: ACAGAGGCAGTGTGAATATCACAGACGACTGCCAGA...GTGGAGACCTTGAAGTGCGCCCTCCAGCTGGCTCTGGACCGGCACCAGGCTCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR TCA 90 bp AGCGGGGGTCCTCAGCCTTGGCAAACAGATAGCACTCACGGGCCTCCTCCATGTAGGACTTGGGCCCTCTaGGGTCCTTCTGTGTCTGGG +
Preference number: 4 (lower is better)
Translates to: SGGPQPWQTDSTHGPPPCRTWAL*GPSVSG
Trigger: CCCAGACACAGAAGGACCTCAGAGGGCCCAAGTCCT...ACATGGAGGAGGCCCGTGAGTGCTATCTGTTTGCCAAGGCTGAGGACCCCCGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000562320.1
ENST00000569985.5
CDS-3UTR TCA 90 bp GGAAGCAGATCCTGCACAGAGTCCCCATCGCTCCTCCCTCTACAAGCCCTGACCGCCAAAGTGCAGCCCTaGGAAGCTGGAGCTGCTTGC +
Preference number: 4 (lower is better)
Translates to: GSRSCTESPSLLPLQALTAKVQP*EAGAAC
Trigger: GCAAGCAGCTCCAGCTTCTCAGGGCTGCACTTTGGC...GGTCAGGGCTTGTAGAGGGAGGAGCGATGGGGACTCTGTGCAGGATCTGCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR GCA 90 bp GGAAGCAGATCCTGCACAGAGTCCCCATCGCTCCTCCCTCTACAAGCCCTGACCGCAGGGAACCCTGCCTaGGCTCCTCTGGTTGCACAA +
Preference number: 4 (lower is better)
Translates to: GSRSCTESPSLLPLQALTAGNPA*APLVAQ
Trigger: TTGTGCAACCAGAGGAGCGCAGGCAGGGTTCCCTGC...GGTCAGGGCTTGTAGAGGGAGGAGCGATGGGGACTCTGTGCAGGATCTGCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR GCA 90 bp CTGTGGCTTCTCGTAGGCTCCAGGCACTGCCAGCTGGAGCTGCCTAGAGCCGTAACTGCCAGCTGGAGCTaGCTAGAGCCGTACTCTTCC +
Preference number: 4 (lower is better)
Translates to: LWLLVGSRHCQLELPRAVTASWS*LEPYSS
Trigger: GGAAGAGTACGGCTCTAGGCAGCTCCAGCTGGCAGT...TACGGCTCTAGGCAGCTCCAGCTGGCAGTGCCTGGAGCCTACGAGAAGCCACAG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000561627.5
CDS-3UTR GCA 90 bp TTGGCCACACTTGAGGCTTCTCAGGTCAAACAGGAGCAGAGAGAGCTGGTCGCTGCGCTGGGGCCACTCTaGACAGCTGCCAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: LATLEASQVKQEQRELVAALGPL*TAASSS
Trigger: GGAGCTGCTGGCAGCTGTGCAGAGTGGCCCCAGCGC...AGCGACCAGCTCTCTCTGCTCCTGTTTGACCTGAGAAGCCTCAAGTGTGGCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290497.11
CDS-3UTR GCA 90 bp CAGATCCTGCACAGAGTCCCCATCGCTCCTCCCTCTACAAGCCCTGACCATGAGCCCCCTCGCCCAGCTTaGTGGTCTGAGCCTCCAACT +
Preference number: 4 (lower is better)
Translates to: QILHRVPIAPPSTSPDHEPPRPA*WSEPPT
Trigger: AGTTGGAGGCTCAGACCAGCAAGCTGGGCGAGGGGG...CTCATGGTCAGGGCTTGTAGAGGGAGGAGCGATGGGGACTCTGTGCAGGATCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR GCA 90 bp CAGCCCCTCATTGTTCTTGATAGCAGTGCATCCAGGAGCTCGAGGTGGGGTTGGGAGAGGAGAGCAGGATaGCCCCCTCGCCCAGCTTGC +
Preference number: 4 (lower is better)
Translates to: QPLIVLDSSASRSSRWGWERRAG*PPRPAC
Trigger: GCAAGCTGGGCGAGGGGGGCATCCTGCTCTCCTCTC...CCAACCCCACCTCGAGCTCCTGGATGCACTGCTATCAAGAACAATGAGGGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR GCA 90 bp GCTGGCCATCCCCTCAGCCCCTCATTGTTCTTGATAGCAGTGCATCCAGGAGCTGAGAGGAGAGCAGGATaGCCCCCTCGCCCAGCTTGC +
Preference number: 4 (lower is better)
Translates to: AGHPLSPSLFLIAVHPGAERRAG*PPRPAC
Trigger: GCAAGCTGGGCGAGGGGGGCATCCTGCTCTCCTCTC...AGCTCCTGGATGCACTGCTATCAAGAACAATGAGGGGCTGAGGGGATGGCCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR GCA 90 bp TCGGGTTCCACCCCCGGAACCCAACACAGCCACTACAGGCACCTGGCCACTGTCGCCTTGGACACGACCTaGTTCCTCCTGTCCAGAAAC +
Preference number: 4 (lower is better)
Translates to: SGSTPGTQHSHYRHLATVALDTT*FLLSRN
Trigger: GTTTCTGGACAGGAGGAAGCAGGTCGTGTCCAAGGC...GACAGTGGCCAGGTGCCTGTAGTGGCTGTGTTGGGTTCCGGGGGTGGAACCCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR GCA 90 bp GGGGTCCTCAGCCTTGGCAAACAGATAGCACTCACGGGCCTCCTCCATGTCCTCGAGCTCCTGCAACCCTaGCAGGCTGCCGTACAGAGA +
Preference number: 4 (lower is better)
Translates to: GVLSLGKQIALTGLLHVLELLQP*QAAVQR
Trigger: TCTCTGTACGGCAGCCTGGCAGGGTTGCAGGAGCTC...GAGGACATGGAGGAGGCCCGTGAGTGCTATCTGTTTGCCAAGGCTGAGGACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR GCA 90 bp AGGGCTGCCCACACTAGAGAGGTTCTAGGTATTTGGAGAGTCCCTGGCGGGTCACGCTCAATGGGGCCCTaGAAGGCCACCTGGGACCAG +
Preference number: 4 (lower is better)
Translates to: RAAHTREVLGIWRVPGGSRSMGP*KATWDQ
Trigger: CTGGTCCCAGGTGGCCTTGCAGGGCCCCATTGAGCG...TGACCCGCCAGGGACTCTCCAAATACCTAGAACCTCTCTAGTGTGGGCAGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR GCA 90 bp AGTGCTGTTCTCTTCTGCCCTACATCCCCAAGAGTCCCTGGAGCGATCTACTGCCCTTGGTCAGGCCCCTaGCCTCTCCCGAGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: SAVLFCPTSPRVPGAIYCPWSGP*PLPSLV
Trigger: CACCAGGCTCGGGAGAGGGCAGGGGCCTGACCAAGG...GCAGTAGATCGCTCCAGGGACTCTTGGGGATGTAGGGCAGAAGAGAACAGCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
CDS-3UTR GCA 90 bp GGACAAAGCTCCCATCTTACTGCTGCAGACGTGAACCTGGGCACGCTCAATGGGCAGTCCTCCGCTTCCTaGCTTGGTCAGGCCCCTGCC +
Preference number: 4 (lower is better)
Translates to: GQSSHLTAADVNLGTLNGQSSAS*LGQAPA
Trigger: GGCAGGGGCCTGACCAAGGCAGGAAGCGGAGGACTG...CCCATTGAGCGTGCCCAGGTTCACGTCTGCAGCAGTAAGATGGGAGCTTTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR GCA 90 bp TCGGGTTCCACCCCCGGAACCCAACACAGCCACTACAGGCACCTGGCCACTGTCACACAAGGAGAGCCCTaGCCCAGTCCAAGCTGCAAT +
Preference number: 4 (lower is better)
Translates to: SGSTPGTQHSHYRHLATVTQGEP*PSPSCN
Trigger: ATTGCAGCTTGGACTGGGGCAGGGCTCTCCTTGTGT...GACAGTGGCCAGGTGCCTGTAGTGGCTGTGTTGGGTTCCGGGGGTGGAACCCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR GCA 90 bp CCGAGCCTGGTGCCGGTCCAGAGCCAGCTGGAGGGCGCACTTCAAGGTCTCCACAGTGCTGTTCTCTTCTaGCCTACATCCCCAAGAGTC +
Preference number: 4 (lower is better)
Translates to: PSLVPVQSQLEGALQGLHSAVLF*PTSPRV
Trigger: GACTCTTGGGGATGTAGGGCAGAAGAGAACAGCACT...GTGGAGACCTTGAAGTGCGCCCTCCAGCTGGCTCTGGACCGGCACCAGGCTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000562320.1
ENST00000569985.5
CDS-3UTR GCA 90 bp ACGCGCACATCTCCCACCTGGAGCAGCCAGAATGGGACATCACCCCACAGGCTTGGGCTTGGGCCGCTCTaGAGGAAGTGTGGATGGATG +
Preference number: 4 (lower is better)
Translates to: TRTSPTWSSQNGTSPHRLGLGPL*RKCGWM
Trigger: CATCCATCCACACTTCCTGCAGAGCGGCCCAAGCCC...AAGCCTGTGGGGTGATGTCCCATTCTGGCTGCTCCAGGTGGGAGATGTGCGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
CDS-3UTR GCA 90 bp TTCAAGGTCTCCACGTTGTTCAGGACGTTGTATCGACTGAGGGCCACCAGCCGAGTTTCCCGCCGCCAGTaGCTCCACAGAGGGCCCCTC +
Preference number: 4 (lower is better)
Translates to: FKVSTLFRTLYRLRATSRVSRRQ*LHRGPL
Trigger: GAGGGGCCCTCTGTGGAGGCACTGGCGGCGGGAAAC...TCGGCTGGTGGCCCTCAGTCGATACAACGTCCTGAACAACGTGGAGACCTTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569985.5
CDS-3UTR GCA 90 bp GAGCCCTGCCCCAGTCCAAGCTGCAATTCTGCAAGAGCTTTCCGGGGCCTGGGGGAACAAGGTCTCAAGTaGTGCTGCAGGCTCCTAGGC +
Preference number: 4 (lower is better)
Translates to: EPCPSPSCNSARAFRGLGEQGLK*CCRLLG
Trigger: GCCTAGGAGCCTGCAGCAGCACTTGAGACCTTGTTC...CCCCAGGCCCCGGAAAGCTCTTGCAGAATTGCAGCTTGGACTGGGGCAGGGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR GCA 90 bp ACAGAGTCCCCATCGCTCCTCCCTCTACAAGCCCTGACCATGAGCAGTGTGTCTTGCCAGCTGGAGGGCTaGAGATCCCAGGCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: TESPSLLPLQALTMSSVSCQLEG*RSQARP
Trigger: TGGCCTGGCCTGGGATCTGCAGCCCTCCAGCTGGCA...AGACACACTGCTCATGGTCAGGGCTTGTAGAGGGAGGAGCGATGGGGACTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR CCA 90 bp ATAGGGGGTGTCTGGCCTGTTGATGACAAAGTCCCCAAAGGCCTTCTCCTCAGCTGCCCAAAGCATGGCTaGGCAGCCCGGGCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: IGGVWPVDDKVPKGLLLSCPKHG*AARAPA
Trigger: TGCTGGGGCCCGGGCTGCCCAGCCATGCTTTGGGCA...GCTGAGGAGAAGGCCTTTGGGGACTTTGTCATCAACAGGCCAGACACCCCCTAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR CCA 90 bp AGCAGATCCTGCACAGAGTCCCCATCGCTCCTCCCTCTACAAGCCCTGACCATGGCCACTATCCTAGTCTaGGCAGGGCTTGGGGACGCC +
Preference number: 4 (lower is better)
Translates to: SRSCTESPSLLPLQALTMATILV*AGLGDA
Trigger: GGCGTCCCCAAGCCCTGCCCAGACTAGGATAGTGGC...CATGGTCAGGGCTTGTAGAGGGAGGAGCGATGGGGACTCTGTGCAGGATCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR CCA 90 bp GGGGTCCTCAGCCTTGGCAAACAGATAGCACTCACGGGCCTCCTCCATGTCCTCAGGAGCAGAGAGAGCTaGTCGCTGCCCAGGATGTCC +
Preference number: 4 (lower is better)
Translates to: GVLSLGKQIALTGLLHVLRSRES*SLPRMS
Trigger: GGACATCCTGGGCAGCGACCAGCTCTCTCTGCTCCT...GAGGACATGGAGGAGGCCCGTGAGTGCTATCTGTTTGCCAAGGCTGAGGACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR CCA 90 bp GTGTGTCTCCTCTCTGTCACAGTCCTCCGCTTCCTGCCTTGGTCAGGCCCCTGCGCTCCACGTGTAGCCTaGAGCTCAGCACTGGGTTCA +
Preference number: 4 (lower is better)
Translates to: VCLLSVTVLRFLPWSGPCAPRVA*SSALGS
Trigger: TGAACCCAGTGCTGAGCTCCAGGCTACACGTGGAGC...GCAGGGGCCTGACCAAGGCAGGAAGCGGAGGACTGTGACAGAGAGGAGACACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR CCA 90 bp GCTGGCTTCTCAGTGCCCTCAGCCCCTGTTCTGTGTGGGTCTGAGGACTTGGGCGCTCCACGTGTAGCCTaGAGCTCAGCACTGGGTTCA +
Preference number: 4 (lower is better)
Translates to: AGFSVPSAPVLCGSEDLGAPRVA*SSALGS
Trigger: TGAACCCAGTGCTGAGCTCCAGGCTACACGTGGAGC...GCCCAAGTCCTCAGACCCACACAGAACAGGGGCTGAGGGCACTGAGAAGCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR CCA 90 bp CCACACTTGAGGCTTCTCAGGTCAAACAGGAGCAGAGAGAGCTGGTCGCTGCCCCCTCCAACTCTGCGCTaGGGCCACTCTGCACAGCTG +
Preference number: 4 (lower is better)
Translates to: PHLRLLRSNRSRESWSLPPPTLR*GHSAQL
Trigger: CAGCTGTGCAGAGTGGCCCCAGCGCAGAGTTGGAGG...GGGCAGCGACCAGCTCTCTCTGCTCCTGTTTGACCTGAGAAGCCTCAAGTGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290497.11
CDS-3UTR CCA 90 bp GGCTTCCCAGCACAGGTGTTCCTGACAGCGTGTCTGTGTGAGAGAGCATGGAGCCCTCCAACTCTGCGCTaGGGCCACTCTGCACAGCTG +
Preference number: 4 (lower is better)
Translates to: GFPAQVFLTACLCERAWSPPTLR*GHSAQL
Trigger: CAGCTGTGCAGAGTGGCCCCAGCGCAGAGTTGGAGG...GCTCCATGCTCTCTCACACAGACACGCTGTCAGGAACACCTGTGCTGGGAAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR CCA 90 bp ACCTTCGGCCCCTCCCCTGGCTTCTTGCTCTGCGTGGCTCCCAGATTCAGTCTTCCTCGCCCAGCTTGCTaGTCTGAGCCTCCAACTCTG +
Preference number: 4 (lower is better)
Translates to: TFGPSPGFLLCVAPRFSLPRPAC*SEPPTL
Trigger: CAGAGTTGGAGGCTCAGACCAGCAAGCTGGGCGAGG...AAGACTGAATCTGGGAGCCACGCAGAGCAAGAAGCCAGGGGAGGGGCCGAAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR CCA 90 bp GGTCCAGAGCCAGCTGGAGGGCGCACTTCAAGGTCTCCACGTTGTTCAGGACGTCGTACAGAGAAGACATaGCTCGGGTTCCACCCCCGG +
Preference number: 4 (lower is better)
Translates to: GPEPAGGRTSRSPRCSGRRTEKT*LGFHPR
Trigger: CCGGGGGTGGAACCCGAGCCATGTCTTCTCTGTACG...ACGTCCTGAACAACGTGGAGACCTTGAAGTGCGCCCTCCAGCTGGCTCTGGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR CCA 90 bp ACGCGCACATCTCCCACCTGGAGCAGCCAGAATGGGACATCACCCCACAGGCTTCGTACAGAGAAGACATaGCTCGGGTTCCACCCCCGG +
Preference number: 4 (lower is better)
Translates to: TRTSPTWSSQNGTSPHRLRTEKT*LGFHPR
Trigger: CCGGGGGTGGAACCCGAGCCATGTCTTCTCTGTACG...AAGCCTGTGGGGTGATGTCCCATTCTGGCTGCTCCAGGTGGGAGATGTGCGCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR CCA 90 bp GCTGGCCATCCCCTCAGCCCCTCATTGTTCTTGATAGCAGTGCATCCAGGAGCTATGAGGGACACGCTGTaGCCACTGCGCTCCCGGACC +
Preference number: 4 (lower is better)
Translates to: AGHPLSPSLFLIAVHPGAMRDTL*PLRSRT
Trigger: GGTCCGGGAGCGCAGTGGCCACAGCGTGTCCCTCAT...AGCTCCTGGATGCACTGCTATCAAGAACAATGAGGGGCTGAGGGGATGGCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR CCA 90 bp GCCACACTTGAGGCTTCTCAGGTCAAACAGGAGCAGAGAGAGCTGGTCGCTGCCCGGACCGCCTCCTGTTaGTCAGACAGCTTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: ATLEASQVKQEQRELVAARTASC*SDSLAG
Trigger: CCCTGCCAAGCTGTCTGACCAACAGGAGGCGGTCCG...GGCAGCGACCAGCTCTCTCTGCTCCTGTTTGACCTGAGAAGCCTCAAGTGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290497.11
CDS-3UTR CCA 90 bp GGGGTTGGGGCTTGGGCCGCTCTGCAGGAAGTGTGGATGGATGCATCTCTGCTTAGATCTCATCCAGGCTaGTGGCAAAGGCGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: GVGAWAALQEVWMDASLLRSHPG*WQRRCP
Trigger: GGGGCAGCGCCTTTGCCACCAGCCTGGATGAGATCT...AAGCAGAGATGCATCCATCCACACTTCCTGCAGAGCGGCCCAAGCCCCAACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR CCA 90 bp AGCAGATCCTGCACAGAGTCCCCATCGCTCCTCCCTCTACAAGCCCTGACCATGGGAAGTGCAGCACAATaGGGGAGCGGGGGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: SRSCTESPSLLPLQALTMGSAAQ*GSGGPQ
Trigger: CTGAGGACCCCCGCTCCCCCATTGTGCTGCACTTCC...CATGGTCAGGGCTTGTAGAGGGAGGAGCGATGGGGACTCTGTGCAGGATCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
CDS-3UTR CCA 90 bp AGAGTCCCCATCGCTCCTCCCTCTACAAGCCCTGACCATGAGCAGTGTGTCTCCGGAAGTGCAGCACAATaGGGGAGCGGGGGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: RVPIAPPSTSPDHEQCVSGSAAQ*GSGGPQ
Trigger: CTGAGGACCCCCGCTCCCCCATTGTGCTGCACTTCC...GGAGACACACTGCTCATGGTCAGGGCTTGTAGAGGGAGGAGCGATGGGGACTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
CDS-3UTR CCA 90 bp CTGCAACCCTGCCAGGCTGCCGTACAGAGAAGACATGGCTCGGGTTCCACCCCCATCCCCAAGAGTCCCTaGAGCGATCTACTGCCCATC +
Preference number: 4 (lower is better)
Translates to: LQPCQAAVQRRHGSGSTPIPKSP*SDLLPI
Trigger: GATGGGCAGTAGATCGCTCCAGGGACTCTTGGGGAT...GGGGGTGGAACCCGAGCCATGTCTTCTCTGTACGGCAGCCTGGCAGGGTTGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR CCA 90 bp ACAGAGTCCCCATCGCTCCTCCCTCTACAAGCCCTGACCATGAGCAGTGTGTCTGGTGGGGTTGGGGCTTaGGCCGCTCTGCAGGAAGTG +
Preference number: 4 (lower is better)
Translates to: TESPSLLPLQALTMSSVSGGVGA*AALQEV
Trigger: CACTTCCTGCAGAGCGGCCCAAGCCCCAACCCCACC...AGACACACTGCTCATGGTCAGGGCTTGTAGAGGGAGGAGCGATGGGGACTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
CDS-3UTR CCA 90 bp AGTCTGGGCAGGGCTTGGGGACGCCGTGGGCAGCCACAGTTGCACATAGCAGTCCTGGAGGTCATAGTATaGGTAGGTTTCCCGCCGCCA +
Preference number: 4 (lower is better)
Translates to: SLGRAWGRRGQPQLHIAVLEVIV*VGFPPP
Trigger: TGGCGGCGGGAAACCTACCCATACTATGACCTCCAG...GACTGCTATGTGCAACTGTGGCTGCCCACGGCGTCCCCAAGCCCTGCCCAGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565553.1
CDS-3UTR CCA 90 bp TGGGGACGCCGTGGGCAGCCACAGTTGCACATAGCAGTCGGCTTTGGACACTGCTGCCCCGGATGTTTGTaGCCCTCAGCACCTTCACCT +
Preference number: 4 (lower is better)
Translates to: WGRRGQPQLHIAVGFGHCCPGCL*PSAPSP
Trigger: AGGTGAAGGTGCTGAGGGCCACAAACATCCGGGGCA...GCAGTGTCCAAAGCCGACTGCTATGTGCAACTGTGGCTGCCCACGGCGTCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565553.1
CDS-3UTR CCA 90 bp AGGGCTGCCCACACTAGAGAGGTTCTAGGTATTTGGAGAGTCCCTGGCGGGTCACTTCGGCCCCTCCCCTaGCTTCTTGCTCTGCGTGGC +
Preference number: 4 (lower is better)
Translates to: RAAHTREVLGIWRVPGGSLRPLP*LLALRG
Trigger: GCCACGCAGAGCAAGAAGCCAGGGGAGGGGCCGAAG...TGACCCGCCAGGGACTCTCCAAATACCTAGAACCTCTCTAGTGTGGGCAGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR TCA 90 bp CCTAGTCTGGGCAGGGCTTGGGGACGCCGTGGGCAGCCACAGTTGCACATAGCACCTTGTCATAGAGGGTaGGCTCCAGGACGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: PSLGRAWGRRGQPQLHIAPCHRG*APGRSS
Trigger: TGAAGAACGTCCTGGAGCTCACCCTCTATGACAAGG...TGCTATGTGCAACTGTGGCTGCCCACGGCGTCCCCAAGCCCTGCCCAGACTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565553.1
CDS-3UTR TCA 90 bp CTCAACAAGGAGGCCCCAGAGGTCGATGAGGGACACGCTGTGGCCACTGCGCTCGAGGTTGGCCACACTTaGGGCTTCTCAGGTCAAACA +
Preference number: 4 (lower is better)
Translates to: LNKEAPEVDEGHAVATALEVGHT*GFSGQT
Trigger: TGTTTGACCTGAGAAGCCTCAAGTGTGGCCAACCTC...GAGCGCAGTGGCCACAGCGTGTCCCTCATCGACCTCTGGGGCCTCCTTGTTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR TCA 90 bp GCTGGCCATCCCCTCAGCCCCTCATTGTTCTTGATAGCAGTGCATCCAGGAGCTCCCAGCTTGCTGGTCTaGGCCTCCAACTCTGCGCTG +
Preference number: 4 (lower is better)
Translates to: AGHPLSPSLFLIAVHPGAPSLLV*ASNSAL
Trigger: CAGCGCAGAGTTGGAGGCTCAGACCAGCAAGCTGGG...AGCTCCTGGATGCACTGCTATCAAGAACAATGAGGGGCTGAGGGGATGGCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR TCA 90 bp GAAGTGCAGCACAATGGGGGAGCGGGGGTCCTCAGCCTTGGCAAACAGATAGCAGAGGGGTTGTGCAGCTaGGGCTTCTGGCAGTCGTCT +
Preference number: 4 (lower is better)
Translates to: EVQHNGGAGVLSLGKQIAEGLCS*GFWQSS
Trigger: AGACGACTGCCAGAAGCCTCAGCTGCACAACCCCTC...TGCTATCTGTTTGCCAAGGCTGAGGACCCCCGCTCCCCCATTGTGCTGCACTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000562320.1
ENST00000569985.5
CDS-3UTR TCA 90 bp ATGCATCTCTGCTTTCCATCTCAGTGTAAGGAGGACAGCTGGCTTCTCAGTGCCAGGGCCCCTGTGGGGTaGGGAGCCTCGTTCGCAGCC +
Preference number: 4 (lower is better)
Translates to: MHLCFPSQCKEDSWLLSARAPVG*GASFAA
Trigger: GGCTGCGAACGAGGCTCCTCACCCCACAGGGGCCCT...GGCACTGAGAAGCCAGCTGTCCTCCTTACACTGAGATGGAAAGCAGAGATGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
CDS-3UTR TCA 90 bp CAAGAGCTGTGGCTTCTCGTAGGCTCCAGGCACTGCCAGCTGGAGCTGCCTAGAGTGGGAACGGAGAGTTaGTGGCAAAGCCTCCGTCCA +
Preference number: 4 (lower is better)
Translates to: QELWLLVGSRHCQLELPRVGTES*WQSLRP
Trigger: TGGACGGAGGCTTTGCCATCAACTCTCCGTTCCCAC...TCTAGGCAGCTCCAGCTGGCAGTGCCTGGAGCCTACGAGAAGCCACAGCTCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290497.11
CDS-3UTR TCA 90 bp GGTCCAGAGCCAGCTGGAGGGCGCACTTCAAGGTCTCCACGTTGTTCAGGACGTGTGGGAACGGAGAGTTaGTGGCAAAGCCTCCGTCCA +
Preference number: 4 (lower is better)
Translates to: GPEPAGGRTSRSPRCSGRVGTES*WQSLRP
Trigger: TGGACGGAGGCTTTGCCATCAACTCTCCGTTCCCAC...ACGTCCTGAACAACGTGGAGACCTTGAAGTGCGCCCTCCAGCTGGCTCTGGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR TCA 90 bp TGGTGCCGGTCCAGAGCCAGCTGGAGGGCGCACTTCAAGGTCTCCACGTTGTTCGGACGTTGTATCGACTaGGGGCCACCAGCCGATAAA +
Preference number: 4 (lower is better)
Translates to: WCRSRASWRAHFKVSTLFGRCID*GPPADK
Trigger: TTTATCGGCTGGTGGCCCTCAGTCGATACAACGTCC...GAACAACGTGGAGACCTTGAAGTGCGCCCTCCAGCTGGCTCTGGACCGGCACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000562320.1
ENST00000569985.5
CDS-3UTR TCA 90 bp AGCCCAAATAACTGGCTCCCCCAGCCCTCGCAACTCATGCCAGCTGGAGGGCTGGGACGTTGTATCGACTaGGGGCCACCAGCCGATAAA +
Preference number: 4 (lower is better)
Translates to: SPNNWLPQPSQLMPAGGLGRCID*GPPADK
Trigger: TTTATCGGCTGGTGGCCCTCAGTCGATACAACGTCC...CAGCCCTCCAGCTGGCATGAGTTGCGAGGGCTGGGGGAGCCAGTTATTTGGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR TCA 90 bp GCTGGCTTCTCAGTGCCCTCAGCCCCTGTTCTGTGTGGGTCTGAGGACTTGGGCGGACGTTGTATCGACTaGGGGCCACCAGCCGATAAA +
Preference number: 4 (lower is better)
Translates to: AGFSVPSAPVLCGSEDLGGRCID*GPPADK
Trigger: TTTATCGGCTGGTGGCCCTCAGTCGATACAACGTCC...GCCCAAGTCCTCAGACCCACACAGAACAGGGGCTGAGGGCACTGAGAAGCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
CDS-3UTR TCA 90 bp CTCCCACCTGGAGCAGCCAGAATGGGACATCACCCCACAGGCTTTAGGGCGCTGCACCCCGCTGTGAAATaGGTGCTGTTCTCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: LPPGAARMGHHPTGFRALHPAVK*VLFSSA
Trigger: GGCAGAAGAGAACAGCACTCATTTCACAGCGGGGTG...CAGCGCCCTAAAGCCTGTGGGGTGATGTCCCATTCTGGCTGCTCCAGGTGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
CDS-3UTR TCA 90 bp GTGTGTCTCCTCTCTGTCACAGTCCTCCGCTTCCTGCCTTGGTCAGGCCCCTGCCACCCCGCTGTGAAATaGGTGCTGTTCTCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: VCLLSVTVLRFLPWSGPCHPAVK*VLFSSA
Trigger: GGCAGAAGAGAACAGCACTCATTTCACAGCGGGGTG...GCAGGGGCCTGACCAAGGCAGGAAGCGGAGGACTGTGACAGAGAGGAGACACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000562320.1
ENST00000569985.5
CDS-3UTR TCA 90 bp CTCCCACCTGGAGCAGCCAGAATGGGACATCACCCCACAGGCTTTAGGGCGCTGTCCAGGTTCGAAGAGTaGAGCCTGGGTAACTGGCAG +
Preference number: 4 (lower is better)
Translates to: LPPGAARMGHHPTGFRALSRFEE*SLGNWQ
Trigger: CTGCCAGTTACCCAGGCTTCACTCTTCGAACCTGGA...CAGCGCCCTAAAGCCTGTGGGGTGATGTCCCATTCTGGCTGCTCCAGGTGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
CDS-3UTR TCA 90 bp CTCCCACCTGGAGCAGCCAGAATGGGACATCACCCCACAGGCTTTAGGGCGCTGCAGCACAGGTGTTCCTaGCAGCGTGTCTGTGTGAGA +
Preference number: 4 (lower is better)
Translates to: LPPGAARMGHHPTGFRALQHRCS*QRVCVR
Trigger: TCTCACACAGACACGCTGTCAGGAACACCTGTGCTG...CAGCGCCCTAAAGCCTGTGGGGTGATGTCCCATTCTGGCTGCTCCAGGTGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR GCA 90 bp ACTGGTGTAAATGGGGTAAGGGTTCTGACCCTGGCGGACCGCCTCCTGTTGGTCGCAGGGAACCCTGCCTaGGCTCCTCTGGTTGCACAA +
Preference number: 4 (lower is better)
Translates to: TGVNGVRVLTLADRLLLVAGNPA*APLVAQ
Trigger: TTGTGCAACCAGAGGAGCGCAGGCAGGGTTCCCTGC...GACCAACAGGAGGCGGTCCGCCAGGGTCAGAACCCTTACCCCATTTACACCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR GCA 90 bp GACTGTGGTCCAGGTTCGAAGAGTGAAGCCTGGGTAACTGGCAGGGAGACACGCCCACCTTGGCCAGAGTaGCCAAAGCATGGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: DCGPGSKSEAWVTGRETRPPWPE*PKHGWA
Trigger: TGCCCAGCCATGCTTTGGGCACTCTGGCCAAGGTGG...GCGTGTCTCCCTGCCAGTTACCCAGGCTTCACTCTTCGAACCTGGACCACAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR GCA 90 bp TCCACACCTGGGGCCAGGTGTGTGCGGAAGGTACGGTTAACCAGGGGGAAGTGCGAGAGAGCTGGTCGCTaGCCAGGATGTCCTTGTCAT +
Preference number: 4 (lower is better)
Translates to: STPGARCVRKVRLTRGKCERAGR*PGCPCH
Trigger: ATGACAAGGACATCCTGGGCAGCGACCAGCTCTCTC...GCACTTCCCCCTGGTTAACCGTACCTTCCGCACACACCTGGCCCCAGGTGTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR GCA 90 bp CAGATCCTGCACAGAGTCCCCATCGCTCCTCCCTCTACAAGCCCTGACCATGAGCATCTCCCCGGAGCGTaGCCTGGATTCTCAGACAGG +
Preference number: 4 (lower is better)
Translates to: QILHRVPIAPPSTSPDHEHLPGA*PGFSDR
Trigger: CCTGTCTGAGAATCCAGGGCACGCTCCGGGGAGATG...CTCATGGTCAGGGCTTGTAGAGGGAGGAGCGATGGGGACTCTGTGCAGGATCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR GCA 90 bp CAAATAACTGGCTCCCCCAGCCCTCGCAACTCATGCCAGCTGGAGGGCTGCAGAACTGCCAGCTGGAGCTaGCTAGAGCCGTACTCTTCC +
Preference number: 4 (lower is better)
Translates to: QITGSPSPRNSCQLEGCRTASWS*LEPYSS
Trigger: GGAAGAGTACGGCTCTAGGCAGCTCCAGCTGGCAGT...TCTGCAGCCCTCCAGCTGGCATGAGTTGCGAGGGCTGGGGGAGCCAGTTATTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR GCA 90 bp TCGGGTTCCACCCCCGGAACCCAACACAGCCACTACAGGCACCTGGCCACTGTCTCATTTCCACCTTCATaGTCAGAGCCACCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: SGSTPGTQHSHYRHLATVSFPPS*SEPPPG
Trigger: GCCAGGAGGTGGCTCTGAGCATGAAGGTGGAAATGA...GACAGTGGCCAGGTGCCTGTAGTGGCTGTGTTGGGTTCCGGGGGTGGAACCCGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR GCA 90 bp TGGTGCCGGTCCAGAGCCAGCTGGAGGGCGCACTTCAAGGTCTCCACGTTGTTCCTGTCCAGAAACTCCTaGTCCCCGTCAGAGAGGTCA +
Preference number: 4 (lower is better)
Translates to: WCRSRASWRAHFKVSTLFLSRNS*SPSERS
Trigger: TGACCTCTCTGACGGGGAGCAGGAGTTTCTGGACAG...GAACAACGTGGAGACCTTGAAGTGCGCCCTCCAGCTGGCTCTGGACCGGCACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR GCA 90 bp AGCGGGGGTCCTCAGCCTTGGCAAACAGATAGCACTCACGGGCCTCCTCCATGTCTCAATCCCAGCACTTaGTGCAGGGCCTTGGACACG +
Preference number: 4 (lower is better)
Translates to: SGGPQPWQTDSTHGPPPCLNPST*CRALDT
Trigger: CGTGTCCAAGGCCCTGCAGCAAGTGCTGGGATTGAG...ACATGGAGGAGGCCCGTGAGTGCTATCTGTTTGCCAAGGCTGAGGACCCCCGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR GCA 90 bp CAAATAACTGGCTCCCCCAGCCCTCGCAACTCATGCCAGCTGGAGGGCTGCAGAGCAACCCTGCCAGGCTaGCGTACAGAGAAGACATGG +
Preference number: 4 (lower is better)
Translates to: QITGSPSPRNSCQLEGCRATLPG*RTEKTW
Trigger: CCATGTCTTCTCTGTACGGCAGCCTGGCAGGGTTGC...TCTGCAGCCCTCCAGCTGGCATGAGTTGCGAGGGCTGGGGGAGCCAGTTATTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR GCA 90 bp ATAGGGGGTGTCTGGCCTGTTGATGACAAAGTCCCCAAAGGCCTTCTCCTCAGCCGCTCAATGGGGCCCTaGAAGGCCACCTGGGACCAG +
Preference number: 4 (lower is better)
Translates to: IGGVWPVDDKVPKGLLLSRSMGP*KATWDQ
Trigger: CTGGTCCCAGGTGGCCTTGCAGGGCCCCATTGAGCG...GCTGAGGAGAAGGCCTTTGGGGACTTTGTCATCAACAGGCCAGACACCCCCTAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR GCA 90 bp AGTGCTGTTCTCTTCTGCCCTACATCCCCAAGAGTCCCTGGAGCGATCTACTGCACACGCTGTGGCCACTaGGCTCCCGGACCCCCAGTT +
Preference number: 4 (lower is better)
Translates to: SAVLFCPTSPRVPGAIYCTRCGH*APGPPV
Trigger: AACTGGGGGTCCGGGAGCGCAGTGGCCACAGCGTGT...GCAGTAGATCGCTCCAGGGACTCTTGGGGATGTAGGGCAGAAGAGAACAGCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR GCA 90 bp CATCCCCTCAGCCCCTCATTGTTCTTGATAGCAGTGCATCCAGGAGCTCGAGGTCAGTCCTCCGCTTCCTaGCTTGGTCAGGCCCCTGCC +
Preference number: 4 (lower is better)
Translates to: HPLSPSLFLIAVHPGARGQSSAS*LGQAPA
Trigger: GGCAGGGGCCTGACCAAGGCAGGAAGCGGAGGACTG...ACCTCGAGCTCCTGGATGCACTGCTATCAAGAACAATGAGGGGCTGAGGGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
CDS-3UTR GCA 90 bp GCAGTGTGTCTCCTCTCTGTCACAGTCCTCCGCTTCCTGCCTTGGTCAGGCCCCACACAAGGAGAGCCCTaGCCCAGTCCAAGCTGCAAT +
Preference number: 4 (lower is better)
Translates to: AVCLLSVTVLRFLPWSGPTQGEP*PSPSCN
Trigger: ATTGCAGCTTGGACTGGGGCAGGGCTCTCCTTGTGT...GGGGCCTGACCAAGGCAGGAAGCGGAGGACTGTGACAGAGAGGAGACACACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000562320.1
ENST00000569985.5
CDS-3UTR GCA 90 bp GAGCCCTGCCCCAGTCCAAGCTGCAATTCTGCAAGAGCTTTCCGGGGCCTGGGGTCTGGTTGCACAAACTaGTGGCTCAGGTGTGACAGG +
Preference number: 4 (lower is better)
Translates to: EPCPSPSCNSARAFRGLGSGCTN*WLRCDR
Trigger: CCTGTCACACCTGAGCCAGCAGTTTGTGCAACCAGA...CCCCAGGCCCCGGAAAGCTCTTGCAGAATTGCAGCTTGGACTGGGGCAGGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR GCA 90 bp AGTCTGGGCAGGGCTTGGGGACGCCGTGGGCAGCCACAGTTGCACATAGCAGTCTCTGGTTGCACAAACTaGTGGCTCAGGTGTGACAGG +
Preference number: 4 (lower is better)
Translates to: SLGRAWGRRGQPQLHIAVSGCTN*WLRCDR
Trigger: CCTGTCACACCTGAGCCAGCAGTTTGTGCAACCAGA...GACTGCTATGTGCAACTGTGGCTGCCCACGGCGTCCCCAAGCCCTGCCCAGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565553.1
CDS-3UTR GCA 90 bp TTCTCAGTGCCCTCAGCCCCTGTTCTGTGTGGGTCTGAGGACTTGGGCCCTCTGGGTCTCAAGTGCTGCTaGAGGCTCCTAGGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: FSVPSAPVLCGSEDLGPLGLKCC*RLLGSS
Trigger: TGAGCTGCCTAGGAGCCTGCAGCAGCACTTGAGACC...CAGAGGGCCCAAGTCCTCAGACCCACACAGAACAGGGGCTGAGGGCACTGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR GCA 90 bp CTCCCACCTGGAGCAGCCAGAATGGGACATCACCCCACAGGCTTTAGGGCGCTGCCTGGCTTCTTGCTCTaGGTGGCTCCCAGATTCAGT +
Preference number: 4 (lower is better)
Translates to: LPPGAARMGHHPTGFRALPGFLL*VAPRFS
Trigger: ACTGAATCTGGGAGCCACGCAGAGCAAGAAGCCAGG...CAGCGCCCTAAAGCCTGTGGGGTGATGTCCCATTCTGGCTGCTCCAGGTGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR GCA 90 bp AGCCCAAATAACTGGCTCCCCCAGCCCTCGCAACTCATGCCAGCTGGAGGGCTGCTCAAGTGGCCAAAGTaGAGCCCTGAGAAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: SPNNWLPQPSQLMPAGGLLKWPK*SPEKLE
Trigger: CTCCAGCTTCTCAGGGCTGCACTTTGGCCACTTGAG...CAGCCCTCCAGCTGGCATGAGTTGCGAGGGCTGGGGGAGCCAGTTATTTGGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR CCA 90 bp GTAGTGGAAGGTCTCATTCCACTCGGGGTCACTGCAGTTGGCCACTATCCTAGTTGCCCAAAGCATGGCTaGGCAGCCCGGGCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: VVEGLIPLGVTAVGHYPSCPKHG*AARAPA
Trigger: TGCTGGGGCCCGGGCTGCCCAGCCATGCTTTGGGCA...ACTAGGATAGTGGCCAACTGCAGTGACCCCGAGTGGAATGAGACCTTCCACTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565553.1
CDS-3UTR CCA 90 bp GGAAGCAGATCCTGCACAGAGTCCCCATCGCTCCTCCCTCTACAAGCCCTGACCGTCTGCCAGCCACCTTaGCCAGAGTGCCCAAAGCAT +
Preference number: 4 (lower is better)
Translates to: GSRSCTESPSLLPLQALTVCQPP*PECPKH
Trigger: ATGCTTTGGGCACTCTGGCCAAGGTGGCTGGCAGAC...GGTCAGGGCTTGTAGAGGGAGGAGCGATGGGGACTCTGTGCAGGATCTGCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR CCA 90 bp CAGCCCCTCATTGTTCTTGATAGCAGTGCATCCAGGAGCTCGAGGTGGGGTTGGGGCTTGGGGACGCCGTaGGCAGCCACAGTTGCACAT +
Preference number: 4 (lower is better)
Translates to: QPLIVLDSSASRSSRWGWGLGTP*AATVAH
Trigger: ATGTGCAACTGTGGCTGCCCACGGCGTCCCCAAGCC...CCAACCCCACCTCGAGCTCCTGGATGCACTGCTATCAAGAACAATGAGGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR CCA 90 bp GCAGCCACAGTTGCACATAGCAGTCGGCTTTGGACACTGCAGGTAGGACAGGGAGCCACTATCCTAGTCTaGGCAGGGCTTGGGGACGCC +
Preference number: 4 (lower is better)
Translates to: AATVAHSSRLWTLQVGQGATILV*AGLGDA
Trigger: GGCGTCCCCAAGCCCTGCCCAGACTAGGATAGTGGC...TCCCTGTCCTACCTGCAGTGTCCAAAGCCGACTGCTATGTGCAACTGTGGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565553.1
CDS-3UTR CCA 90 bp AGCAGATCCTGCACAGAGTCCCCATCGCTCCTCCCTCTACAAGCCCTGACCATGAGGAGCAGAGAGAGCTaGTCGCTGCCCAGGATGTCC +
Preference number: 4 (lower is better)
Translates to: SRSCTESPSLLPLQALTMRSRES*SLPRMS
Trigger: GGACATCCTGGGCAGCGACCAGCTCTCTCTGCTCCT...CATGGTCAGGGCTTGTAGAGGGAGGAGCGATGGGGACTCTGTGCAGGATCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR CCA 90 bp TCCACACCTGGGGCCAGGTGTGTGCGGAAGGTACGGTTAACCAGGGGGAAGTGCAGCACTGGGTTCACGTaGAAGGTAAAGGTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: STPGARCVRKVRLTRGKCSTGFT*KVKVGG
Trigger: CCCACCCACCTTTACCTTCCACGTGAACCCAGTGCT...GCACTTCCCCCTGGTTAACCGTACCTTCCGCACACACCTGGCCCCAGGTGTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR CCA 90 bp GGTCCAGAGCCAGCTGGAGGGCGCACTTCAAGGTCTCCACGTTGTTCAGGACGTGCTCCACGTGTAGCCTaGAGCTCAGCACTGGGTTCA +
Preference number: 4 (lower is better)
Translates to: GPEPAGGRTSRSPRCSGRAPRVA*SSALGS
Trigger: TGAACCCAGTGCTGAGCTCCAGGCTACACGTGGAGC...ACGTCCTGAACAACGTGGAGACCTTGAAGTGCGCCCTCCAGCTGGCTCTGGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR CCA 90 bp CTCAACAAGGAGGCCCCAGAGGTCGATGAGGGACACGCTGTGGCCACTGCGCTCACTGTAGCCGCTCCGTaGACAAAGCTCCCATCTTAC +
Preference number: 4 (lower is better)
Translates to: LNKEAPEVDEGHAVATALTVAAP*TKLPSY
Trigger: GTAAGATGGGAGCTTTGTCCACGGAGCGGCTACAGT...GAGCGCAGTGGCCACAGCGTGTCCCTCATCGACCTCTGGGGCCTCCTTGTTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR CCA 90 bp TCCCCTCAGCCCCTCATTGTTCTTGATAGCAGTGCATCCAGGAGCTCGAGGTGGCGGACCGCCTCCTGTTaGTCAGACAGCTTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: SPQPLIVLDSSASRSSRWRTASC*SDSLAG
Trigger: CCCTGCCAAGCTGTCTGACCAACAGGAGGCGGTCCG...CCACCTCGAGCTCCTGGATGCACTGCTATCAAGAACAATGAGGGGCTGAGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR CCA 90 bp GCCACACTTGAGGCTTCTCAGGTCAAACAGGAGCAGAGAGAGCTGGTCGCTGCCAGATCTCATCCAGGCTaGTGGCAAAGGCGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: ATLEASQVKQEQRELVAARSHPG*WQRRCP
Trigger: GGGGCAGCGCCTTTGCCACCAGCCTGGATGAGATCT...GGCAGCGACCAGCTCTCTCTGCTCCTGTTTGACCTGAGAAGCCTCAAGTGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290497.11
CDS-3UTR CCA 90 bp CATCCCCTCAGCCCCTCATTGTTCTTGATAGCAGTGCATCCAGGAGCTCGAGGTGGAGAAGGGCCCCTGTaGGGTGAGGAGCCTCGTTCG +
Preference number: 4 (lower is better)
Translates to: HPLSPSLFLIAVHPGARGGEGPL*GEEPRS
Trigger: CGAACGAGGCTCCTCACCCCACAGGGGCCCTTCTCC...ACCTCGAGCTCCTGGATGCACTGCTATCAAGAACAATGAGGGGCTGAGGGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
CDS-3UTR CCA 90 bp CCAGGACGTTCTTCACAGCACCATGGATCTGGTAGTGGAAGGTCTCATTCCACTGCCCTCTCCCGAGCCTaGTGCCGGTCCAGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: PGRSSQHHGSGSGRSHSTALSRA*CRSRAS
Trigger: GCTGGCTCTGGACCGGCACCAGGCTCGGGAGAGGGC...AGTGGAATGAGACCTTCCACTACCAGATCCATGGTGCTGTGAAGAACGTCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290497.11
CDS-3UTR CCA 90 bp ATTCTCTCCACACCCCGCTGTGAAATGAGTGCTGTTCTCTTCTGCCCTACATCCGCCCTCTCCCGAGCCTaGTGCCGGTCCAGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: ILSTPRCEMSAVLFCPTSALSRA*CRSRAS
Trigger: GCTGGCTCTGGACCGGCACCAGGCTCGGGAGAGGGC...GGATGTAGGGCAGAAGAGAACAGCACTCATTTCACAGCGGGGTGTGGAGAGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
CDS-3UTR CCA 90 bp GGTGCCGGTCCAGAGCCAGCTGGAGGGCGCACTTCAAGGTCTCCACGTTGTTCATGTAAGGAGGACAGCTaGCTTCTCAGTGCCCTCAGC +
Preference number: 4 (lower is better)
Translates to: GAGPEPAGGRTSRSPRCSCKEDS*LLSALS
Trigger: GCTGAGGGCACTGAGAAGCCAGCTGTCCTCCTTACA...TGAACAACGTGGAGACCTTGAAGTGCGCCCTCCAGCTGGCTCTGGACCGGCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000562320.1
ENST00000569985.5
CDS-3UTR CCA 90 bp GTGTGTCTCCTCTCTGTCACAGTCCTCCGCTTCCTGCCTTGGTCAGGCCCCTGCCTGGAGGTCATAGTATaGGTAGGTTTCCCGCCGCCA +
Preference number: 4 (lower is better)
Translates to: VCLLSVTVLRFLPWSGPCLEVIV*VGFPPP
Trigger: TGGCGGCGGGAAACCTACCCATACTATGACCTCCAG...GCAGGGGCCTGACCAAGGCAGGAAGCGGAGGACTGTGACAGAGAGGAGACACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569985.5
CDS-3UTR CCA 90 bp GCTGTTCTCTTCTGCCCTACATCCCCAAGAGTCCCTGGAGCGATCTACTGCCCAATGCTGCAGAGGCCGTaGCCAGATGGAGAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: AVLFCPTSPRVPGAIYCPMLQRP*PDGEGL
Trigger: CAGGCCCTCTCCATCTGGCCACGGCCTCTGCAGCAT...TGGGCAGTAGATCGCTCCAGGGACTCTTGGGGATGTAGGGCAGAAGAGAACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR CCA 90 bp TTGCCTACACTTCTGTGTGAGAAGGTCCCCGCCCACTCTGCACAAGCCCACGTTGGCCAAGACACAGGCTaGGCTCCAGTCACCCTTCCC +
Preference number: 4 (lower is better)
Translates to: LPTLLCEKVPAHSAQAHVGQDTG*APVTLP
Trigger: GGGAAGGGTGACTGGAGCCCAGCCTGTGTCTTGGCC...AACGTGGGCTTGTGCAGAGTGGGCGGGGACCTTCTCACACAGAAGTGTAGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR CCA 90 bp AGGGCTTGGGGACGCCGTGGGCAGCCACAGTTGCACATAGCAGTCGGCTTTGGACTGAAAAGGTTTCCTTaGGGAGGGCAGGTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: RAWGRRGQPQLHIAVGFGLKRFP*GGQVCA
Trigger: GGCACAGACCTGCCCTCCCCAAGGAAACCTTTTCAG...TCCAAAGCCGACTGCTATGTGCAACTGTGGCTGCCCACGGCGTCCCCAAGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565553.1
3UTR CAA 72 bp AGAGCCAGCTGGAGGGCGCACTTCAAGGTCTCCACGTaGTTCAGGACGTTGTATCGACTGAGGGCCACCAGC +
Preference number: 4 (lower is better)
Translates to: RASWRAHFKVST*FRTLYRLRATS
Trigger: GCTGGTGGCCCTCAGTCGATACAACGTCCTGAACAACGTGGAGACCTTGAAGTGCGCCCTCCAGCTGGCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000562320.1
ENST00000569985.5
3UTR CAA 72 bp ACTGGCTGGGTTACCTTCGGCCCCTCCCCTGGCTTCTaGCTCTGCGTGGCTCCCAGATTCAGTCTTGTTGGA +
Preference number: 4 (lower is better)
Translates to: TGWVTFGPSPGF*LCVAPRFSLVG
Trigger: TCCAACAAGACTGAATCTGGGAGCCACGCAGAGCAAGAAGCCAGGGGAGGGGCCGAAGGTAACCCAGCCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR TCA 90 bp ATCGCTCCTCCCTCTACAAGCCCTGACCATGAGCAGTGTGTCTCCTCTCTGTCACCCAGCTTGCTGGTCTaGGCCTCCAACTCTGCGCTG +
Preference number: 4 (lower is better)
Translates to: IAPPSTSPDHEQCVSSLSPSLLV*ASNSAL
Trigger: CAGCGCAGAGTTGGAGGCTCAGACCAGCAAGCTGGG...TGACAGAGAGGAGACACACTGCTCATGGTCAGGGCTTGTAGAGGGAGGAGCGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR TCA 90 bp TCCTCCATGTCCTCAGGGCCCACCTCGATGCTAGGGAAGGGGATTCCTCGGTCCAGTTGGTGCGGACGTTaGCACTGGTGTAAATGGGGT +
Preference number: 4 (lower is better)
Translates to: SSMSSGPTSMLGKGIPRSSWCGR*HWCKWG
Trigger: ACCCCATTTACACCAGTGTCAACGTCCGCACCAACT...GGACCGAGGAATCCCCTTCCCTAGCATCGAGGTGGGCCCTGAGGACATGGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR TCA 90 bp ATGCATCTCTGCTTTCCATCTCAGTGTAAGGAGGACAGCTGGCTTCTCAGTGCCACCACTCCAGGAAGCTaGGGCCCGAGCCGGCGGTCT +
Preference number: 4 (lower is better)
Translates to: MHLCFPSQCKEDSWLLSATTPGS*GPSRRS
Trigger: AGACCGCCGGCTCGGGCCTCAGCTTCCTGGAGTGGT...GGCACTGAGAAGCCAGCTGTCCTCCTTACACTGAGATGGAAAGCAGAGATGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR TCA 90 bp ACACAAGGAGAGCCCTGCCCCAGTCCAAGCTGCAATTCTGCAAGAGCTTTCCGGGAGGGGTTGTGCAGCTaGGGCTTCTGGCAGTCGTCT +
Preference number: 4 (lower is better)
Translates to: TQGEPCPSPSCNSARAFREGLCS*GFWQSS
Trigger: AGACGACTGCCAGAAGCCTCAGCTGCACAACCCCTC...CCGGAAAGCTCTTGCAGAATTGCAGCTTGGACTGGGGCAGGGCTCTCCTTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
CDS-3UTR TCA 90 bp GCTGTTCTCTTCTGCCCTACATCCCCAAGAGTCCCTGGAGCGATCTACTGCCCAGAGGGGTTGTGCAGCTaGGGCTTCTGGCAGTCGTCT +
Preference number: 4 (lower is better)
Translates to: AVLFCPTSPRVPGAIYCPEGLCS*GFWQSS
Trigger: AGACGACTGCCAGAAGCCTCAGCTGCACAACCCCTC...TGGGCAGTAGATCGCTCCAGGGACTCTTGGGGATGTAGGGCAGAAGAGAACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
CDS-3UTR TCA 90 bp AGGGTTCTGACCCTGGCGGACCGCCTCCTGTTGGTCAGACAGCTTGGCAGGGTTCCTGGGGCTCATAGGTaGAGTTCATCATGCCATAGG +
Preference number: 4 (lower is better)
Translates to: RVLTLADRLLLVRQLGRVPGAHR*SSSCHR
Trigger: CCTATGGCATGATGAACTTCACCTATGAGCCCCAGG...AACCCTGCCAAGCTGTCTGACCAACAGGAGGCGGTCCGCCAGGGTCAGAACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR TCA 90 bp TCCTCCATGTCCTCAGGGCCCACCTCGATGCTAGGGAAGGGGATTCCTCGGTCCCTCCACACCCCGCTGTaGAATGAGTGCTGTTCTCTT +
Preference number: 4 (lower is better)
Translates to: SSMSSGPTSMLGKGIPRSLHTPL*NECCSL
Trigger: AAGAGAACAGCACTCATTTCACAGCGGGGTGTGGAG...GGACCGAGGAATCCCCTTCCCTAGCATCGAGGTGGGCCCTGAGGACATGGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR TCA 90 bp GGCCACTGTCCAGAGCCTCACTCAATCCCAGCACTTGCTGCAGGGCCTTGGACATCCAGGTTCGAAGAGTaGAGCCTGGGTAACTGGCAG +
Preference number: 4 (lower is better)
Translates to: GHCPEPHSIPALAAGPWTSRFEE*SLGNWQ
Trigger: CTGCCAGTTACCCAGGCTTCACTCTTCGAACCTGGA...TGTCCAAGGCCCTGCAGCAAGTGCTGGGATTGAGTGAGGCTCTGGACAGTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR TCA 90 bp CATCCCCTCAGCCCCTCATTGTTCTTGATAGCAGTGCATCCAGGAGCTCGAGGTCCTGCCCCCTGCCCTTaGTCTTGTCCCAGTCTCCTC +
Preference number: 4 (lower is better)
Translates to: HPLSPSLFLIAVHPGARGPAPCP*SCPSLL
Trigger: GAGGAGACTGGGACAAGATCAAGGGCAGGGGGCAGG...ACCTCGAGCTCCTGGATGCACTGCTATCAAGAACAATGAGGGGCTGAGGGGATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR GCA 90 bp ACACAAGGAGAGCCCTGCCCCAGTCCAAGCTGCAATTCTGCAAGAGCTTTCCGGCATCTCCCCGGAGCGTaGCCTGGATTCTCAGACAGG +
Preference number: 4 (lower is better)
Translates to: TQGEPCPSPSCNSARAFRHLPGA*PGFSDR
Trigger: CCTGTCTGAGAATCCAGGGCACGCTCCGGGGAGATG...CCGGAAAGCTCTTGCAGAATTGCAGCTTGGACTGGGGCAGGGCTCTCCTTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR GCA 90 bp GTTGGTGCGGACGTTGACACTGGTGTAAATGGGGTAAGGGTTCTGACCCTGGCGCATCTCCCCGGAGCGTaGCCTGGATTCTCAGACAGG +
Preference number: 4 (lower is better)
Translates to: VGADVDTGVNGVRVLTLAHLPGA*PGFSDR
Trigger: CCTGTCTGAGAATCCAGGGCACGCTCCGGGGAGATG...CGCCAGGGTCAGAACCCTTACCCCATTTACACCAGTGTCAACGTCCGCACCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR GCA 90 bp GGAAGCAGATCCTGCACAGAGTCCCCATCGCTCCTCCCTCTACAAGCCCTGACCGCCTTGGACACGACCTaGTTCCTCCTGTCCAGAAAC +
Preference number: 4 (lower is better)
Translates to: GSRSCTESPSLLPLQALTALDTT*FLLSRN
Trigger: GTTTCTGGACAGGAGGAAGCAGGTCGTGTCCAAGGC...GGTCAGGGCTTGTAGAGGGAGGAGCGATGGGGACTCTGTGCAGGATCTGCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR GCA 90 bp GGCTTCCCAGCACAGGTGTTCCTGACAGCGTGTCTGTGTGAGAGAGCATGGAGCCTCAATCCCAGCACTTaGTGCAGGGCCTTGGACACG +
Preference number: 4 (lower is better)
Translates to: GFPAQVFLTACLCERAWSLNPST*CRALDT
Trigger: CGTGTCCAAGGCCCTGCAGCAAGTGCTGGGATTGAG...GCTCCATGCTCTCTCACACAGACACGCTGTCAGGAACACCTGTGCTGGGAAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR GCA 90 bp AGCAGATCCTGCACAGAGTCCCCATCGCTCCTCCCTCTACAAGCCCTGACCATGGCAACCCTGCCAGGCTaGCGTACAGAGAAGACATGG +
Preference number: 4 (lower is better)
Translates to: SRSCTESPSLLPLQALTMATLPG*RTEKTW
Trigger: CCATGTCTTCTCTGTACGGCAGCCTGGCAGGGTTGC...CATGGTCAGGGCTTGTAGAGGGAGGAGCGATGGGGACTCTGTGCAGGATCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR GCA 90 bp TACCACTCCAGGAAGCTGAGGCCCGAGCCGGCGGTCTTTAGGAAGATCTCATCCTTAACCAGGGGGAAGTaGAGCACAATGGGGGAGCGG +
Preference number: 4 (lower is better)
Translates to: YHSRKLRPEPAVFRKISSLTRGK*STMGER
Trigger: CCGCTCCCCCATTGTGCTGCACTTCCCCCTGGTTAA...GGATGAGATCTTCCTAAAGACCGCCGGCTCGGGCCTCAGCTTCCTGGAGTGGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR GCA 90 bp GTGGCATTGCCTACACTTCTGTGTGAGAAGGTCCCCGCCCACTCTGCACAAGCCCAGCTGGCTTCTCAGTaGCCTCAGCCCCTGTTCTGT +
Preference number: 4 (lower is better)
Translates to: VALPTLLCEKVPAHSAQAQLASQ*PQPLFC
Trigger: ACAGAACAGGGGCTGAGGGCACTGAGAAGCCAGCTG...GGCTTGTGCAGAGTGGGCGGGGACCTTCTCACACAGAAGTGTAGGCAATGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR GCA 90 bp TTGCCTACACTTCTGTGTGAGAAGGTCCCCGCCCACTCTGCACAAGCCCACGTTTGGACAGCAGGTCTGTaGCCCGGATGTTTGTGGCCC +
Preference number: 4 (lower is better)
Translates to: LPTLLCEKVPAHSAQAHVWTAGL*PGCLWP
Trigger: GGGCCACAAACATCCGGGGCACAGACCTGCTGTCCA...AACGTGGGCTTGTGCAGAGTGGGCGGGGACCTTCTCACACAGAAGTGTAGGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR GCA 90 bp GGAAGCAGATCCTGCACAGAGTCCCCATCGCTCCTCCCTCTACAAGCCCTGACCGCACAAGCCCACGTTTaGCTCCTTCACAAGCCTTGC +
Preference number: 4 (lower is better)
Translates to: GSRSCTESPSLLPLQALTAQAHV*LLHKPC
Trigger: GCAAGGCTTGTGAAGGAGGCAAACGTGGGCTTGTGC...GGTCAGGGCTTGTAGAGGGAGGAGCGATGGGGACTCTGTGCAGGATCTGCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR GCA 90 bp CAGCTCAGCACTGGAGGCATATGCTGCAGAGGCCGTGGCCAGATGGAGAGGGCCTCAGTGCAGGCACAATaGCAAAAGCCTGGAGCAAAC +
Preference number: 4 (lower is better)
Translates to: QLSTGGICCRGRGQMERASVQAQ*QKPGAN
Trigger: GTTTGCTCCAGGCTTTTGGCATTGTGCCTGCACTGA...GGCCCTCTCCATCTGGCCACGGCCTCTGCAGCATATGCCTCCAGTGCTGAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR CCA 90 bp CAGATCCTGCACAGAGTCCCCATCGCTCCTCCCTCTACAAGCCCTGACCATGAGGTCTGCCAGCCACCTTaGCCAGAGTGCCCAAAGCAT +
Preference number: 4 (lower is better)
Translates to: QILHRVPIAPPSTSPDHEVCQPP*PECPKH
Trigger: ATGCTTTGGGCACTCTGGCCAAGGTGGCTGGCAGAC...CTCATGGTCAGGGCTTGTAGAGGGAGGAGCGATGGGGACTCTGTGCAGGATCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR CCA 90 bp CTCATTCCACTCGGGGTCACTGCAGTTGGCCACTATCCTAGTCTGGGCAGGGCTGTCTGCCAGCCACCTTaGCCAGAGTGCCCAAAGCAT +
Preference number: 4 (lower is better)
Translates to: LIPLGVTAVGHYPSLGRAVCQPP*PECPKH
Trigger: ATGCTTTGGGCACTCTGGCCAAGGTGGCTGGCAGAC...AGCCCTGCCCAGACTAGGATAGTGGCCAACTGCAGTGACCCCGAGTGGAATGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565553.1
CDS-3UTR CCA 90 bp ACATCCCCAAGAGTCCCTGGAGCGATCTACTGCCCATCTTCTCCAAAAACACACAGTCTGGGCAGGGCTTaGGGACGCCGTGGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: TSPRVPGAIYCPSSPKTHSLGRA*GRRGQP
Trigger: TGGCTGCCCACGGCGTCCCCAAGCCCTGCCCAGACT...GTGTGTTTTTGGAGAAGATGGGCAGTAGATCGCTCCAGGGACTCTTGGGGATGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR CCA 90 bp AGTGCTGTTCTCTTCTGCCCTACATCCCCAAGAGTCCCTGGAGCGATCTACTGCGCCACTATCCTAGTCTaGGCAGGGCTTGGGGACGCC +
Preference number: 4 (lower is better)
Translates to: SAVLFCPTSPRVPGAIYCATILV*AGLGDA
Trigger: GGCGTCCCCAAGCCCTGCCCAGACTAGGATAGTGGC...GCAGTAGATCGCTCCAGGGACTCTTGGGGATGTAGGGCAGAAGAGAACAGCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR CCA 90 bp TCATTCCACTCGGGGTCACTGCAGTTGGCCACTATCCTAGTCTGGGCAGGGCTTAGGAGCAGAGAGAGCTaGTCGCTGCCCAGGATGTCC +
Preference number: 4 (lower is better)
Translates to: SFHSGSLQLATILVWAGLRSRES*SLPRMS
Trigger: GGACATCCTGGGCAGCGACCAGCTCTCTCTGCTCCT...AAGCCCTGCCCAGACTAGGATAGTGGCCAACTGCAGTGACCCCGAGTGGAATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565553.1
CDS-3UTR CCA 90 bp TCTCTTCTGCCCTACATCCCCAAGAGTCCCTGGAGCGATCTACTGCCCATCTTCCCAGGCACTGCCAGCTaGAGCTGCCTAGAGCCGTAC +
Preference number: 4 (lower is better)
Translates to: SLLPYIPKSPWSDLLPIFPGTAS*SCLEPY
Trigger: GTACGGCTCTAGGCAGCTCCAGCTGGCAGTGCCTGG...GAAGATGGGCAGTAGATCGCTCCAGGGACTCTTGGGGATGTAGGGCAGAAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000397272.7
CDS-3UTR CCA 90 bp GTGTGTCTCCTCTCTGTCACAGTCCTCCGCTTCCTGCCTTGGTCAGGCCCCTGCCCTGGAGCTCAGCACTaGGTTCACGTGGAAGGTAAA +
Preference number: 4 (lower is better)
Translates to: VCLLSVTVLRFLPWSGPCPGAQH*VHVEGK
Trigger: TTTACCTTCCACGTGAACCCAGTGCTGAGCTCCAGG...GCAGGGGCCTGACCAAGGCAGGAAGCGGAGGACTGTGACAGAGAGGAGACACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR CCA 90 bp CAGCCCCTCATTGTTCTTGATAGCAGTGCATCCAGGAGCTCGAGGTGGGGTTGGCGTACAGAGAAGACATaGCTCGGGTTCCACCCCCGG +
Preference number: 4 (lower is better)
Translates to: QPLIVLDSSASRSSRWGWRTEKT*LGFHPR
Trigger: CCGGGGGTGGAACCCGAGCCATGTCTTCTCTGTACG...CCAACCCCACCTCGAGCTCCTGGATGCACTGCTATCAAGAACAATGAGGGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR CCA 90 bp TTGCCTACACTTCTGTGTGAGAAGGTCCCCGCCCACTCTGCACAAGCCCACGTTCACCTGGGACCAGGCTaGGTCCCTGTAGAGTGTGGA +
Preference number: 4 (lower is better)
Translates to: LPTLLCEKVPAHSAQAHVHLGPG*VPVECG
Trigger: TCCACACTCTACAGGGACCCAGCCTGGTCCCAGGTG...AACGTGGGCTTGTGCAGAGTGGGCGGGGACCTTCTCACACAGAAGTGTAGGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR CCA 90 bp CAGCTCAGCACTGGAGGCATATGCTGCAGAGGCCGTGGCCAGATGGAGAGGGCCGCAGGGTTCTCCTCCTaGTACAGGAGATACTCAACA +
Preference number: 4 (lower is better)
Translates to: QLSTGGICCRGRGQMERAAGFSS*YRRYST
Trigger: TGTTGAGTATCTCCTGTACCAGGAGGAGAACCCTGC...GGCCCTCTCCATCTGGCCACGGCCTCTGCAGCATATGCCTCCAGTGCTGAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR CCA 90 bp GTGCTGTTCTCTTCTGCCCTACATCCCCAAGAGTCCCTGGAGCGATCTACTGCCAGATCTCATCCAGGCTaGTGGCAAAGGCGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: VLFSSALHPQESLERSTARSHPG*WQRRCP
Trigger: GGGGCAGCGCCTTTGCCACCAGCCTGGATGAGATCT...GGCAGTAGATCGCTCCAGGGACTCTTGGGGATGTAGGGCAGAAGAGAACAGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR CCA 90 bp GCTCCAGGACGTTCTTCACAGCACCATGGATCTGGTAGTGGAAGGTCTCATTCCGGAGAAGGGCCCCTGTaGGGTGAGGAGCCTCGTTCG +
Preference number: 4 (lower is better)
Translates to: APGRSSQHHGSGSGRSHSGEGPL*GEEPRS
Trigger: CGAACGAGGCTCCTCACCCCACAGGGGCCCTTCTCC...GGAATGAGACCTTCCACTACCAGATCCATGGTGCTGTGAAGAACGTCCTGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290497.11
CDS-3UTR CCA 90 bp AATGGGGGAGCGGGGGTCCTCAGCCTTGGCAAACAGATAGCACTCACGGGCCTCGTGAAGTTAAAGCTCTaGGCGGAAGTGAAGCGGGAG +
Preference number: 4 (lower is better)
Translates to: NGGAGVLSLGKQIALTGLVKLKL*AEVKRE
Trigger: CTCCCGCTTCACTTCCGCCCAGAGCTTTAACTTCAC...GAGGCCCGTGAGTGCTATCTGTTTGCCAAGGCTGAGGACCCCCGCTCCCCCATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000562320.1
ENST00000569985.5
CDS-3UTR CCA 90 bp GCTGGCTTCTCAGTGCCCTCAGCCCCTGTTCTGTGTGGGTCTGAGGACTTGGGCGTGAAGTTAAAGCTCTaGGCGGAAGTGAAGCGGGAG +
Preference number: 4 (lower is better)
Translates to: AGFSVPSAPVLCGSEDLGVKLKL*AEVKRE
Trigger: CTCCCGCTTCACTTCCGCCCAGAGCTTTAACTTCAC...GCCCAAGTCCTCAGACCCACACAGAACAGGGGCTGAGGGCACTGAGAAGCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
CDS-3UTR CCA 90 bp TCTCTTCTGCCCTACATCCCCAAGAGTCCCTGGAGCGATCTACTGCCCATCTTCCGGTCCAGAGCCAGCTaGAGGGCGCACTTCAAGGTC +
Preference number: 4 (lower is better)
Translates to: SLLPYIPKSPWSDLLPIFRSRAS*RAHFKV
Trigger: GACCTTGAAGTGCGCCCTCCAGCTGGCTCTGGACCG...GAAGATGGGCAGTAGATCGCTCCAGGGACTCTTGGGGATGTAGGGCAGAAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
CDS-3UTR CCA 90 bp GGTCCAGAGCCAGCTGGAGGGCGCACTTCAAGGTCTCCACGTTGTTCAGGACGTATCCCCAAGAGTCCCTaGAGCGATCTACTGCCCATC +
Preference number: 4 (lower is better)
Translates to: GPEPAGGRTSRSPRCSGRIPKSP*SDLLPI
Trigger: GATGGGCAGTAGATCGCTCCAGGGACTCTTGGGGAT...ACGTCCTGAACAACGTGGAGACCTTGAAGTGCGCCCTCCAGCTGGCTCTGGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000562320.1
ENST00000569985.5
CDS-3UTR CCA 90 bp GAGACACGCGCACATCTCCCACCTGGAGCAGCCAGAATGGGACATCACCCCACAATCCCCAAGAGTCCCTaGAGCGATCTACTGCCCATC +
Preference number: 4 (lower is better)
Translates to: ETRAHLPPGAARMGHHPTIPKSP*SDLLPI
Trigger: GATGGGCAGTAGATCGCTCCAGGGACTCTTGGGGAT...TGTGGGGTGATGTCCCATTCTGGCTGCTCCAGGTGGGAGATGTGCGCGTGTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
CDS-3UTR CCA 90 bp AGAGTCCCCATCGCTCCTCCCTCTACAAGCCCTGACCATGAGCAGTGTGTCTCCCTGCCTGCGCTCCTCTaGTTGCACAAACTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: RVPIAPPSTSPDHEQCVSLPALL*LHKLLA
Trigger: AGCCAGCAGTTTGTGCAACCAGAGGAGCGCAGGCAG...GGAGACACACTGCTCATGGTCAGGGCTTGTAGAGGGAGGAGCGATGGGGACTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397272.7
ENST00000569985.5
CDS-3UTR CCA 90 bp TGGGGACGCCGTGGGCAGCCACAGTTGCACATAGCAGTCGGCTTTGGACACTGCCATAGCAGTCGGCTTTaGACACTGCAGGTAGGACAG +
Preference number: 4 (lower is better)
Translates to: WGRRGQPQLHIAVGFGHCHSSRL*TLQVGQ
Trigger: CTGTCCTACCTGCAGTGTCCAAAGCCGACTGCTATG...GCAGTGTCCAAAGCCGACTGCTATGTGCAACTGTGGCTGCCCACGGCGTCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565553.1
CDS-3UTR TCA 90 bp AGCGGGGGTCCTCAGCCTTGGCAAACAGATAGCACTCACGGGCCTCCTCCATGTCCTTGTCATAGAGGGTaGGCTCCAGGACGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: SGGPQPWQTDSTHGPPPCPCHRG*APGRSS
Trigger: TGAAGAACGTCCTGGAGCTCACCCTCTATGACAAGG...ACATGGAGGAGGCCCGTGAGTGCTATCTGTTTGCCAAGGCTGAGGACCCCCGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR TCA 90 bp GCCACACTTGAGGCTTCTCAGGTCAAACAGGAGCAGAGAGAGCTGGTCGCTGCCGGGAAGGTGTGTTTGTaGGGTTGGCCACACTTGAGG +
Preference number: 4 (lower is better)
Translates to: ATLEASQVKQEQRELVAAGKVCL*GWPHLR
Trigger: CCTCAAGTGTGGCCAACCTCACAAACACACCTTCCC...GGCAGCGACCAGCTCTCTCTGCTCCTGTTTGACCTGAGAAGCCTCAAGTGTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290497.11
CDS-3UTR TCA 90 bp TCCACACCTGGGGCCAGGTGTGTGCGGAAGGTACGGTTAACCAGGGGGAAGTGCGTGAATCCTGGTGGTTaGGTGGGAAGGTGTGTTTGT +
Preference number: 4 (lower is better)
Translates to: STPGARCVRKVRLTRGKCVNPGG*VGRCVC
Trigger: ACAAACACACCTTCCCACTCAACCACCAGGATTCAC...GCACTTCCCCCTGGTTAACCGTACCTTCCGCACACACCTGGCCCCAGGTGTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR TCA 90 bp AGCAGATCCTGCACAGAGTCCCCATCGCTCCTCCCTCTACAAGCCCTGACCATGCAACCTCATAGGGCGTaGACTCGCACCACTCTGCAA +
Preference number: 4 (lower is better)
Translates to: SRSCTESPSLLPLQALTMQPHRA*TRTTLQ
Trigger: TTGCAGAGTGGTGCGAGTTCACGCCCTATGAGGTTG...CATGGTCAGGGCTTGTAGAGGGAGGAGCGATGGGGACTCTGTGCAGGATCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR TCA 90 bp AGGGCTGCCCACACTAGAGAGGTTCTAGGTATTTGGAGAGTCCCTGGCGGGTCAGTGGGAACGGAGAGTTaGTGGCAAAGCCTCCGTCCA +
Preference number: 4 (lower is better)
Translates to: RAAHTREVLGIWRVPGGSVGTES*WQSLRP
Trigger: TGGACGGAGGCTTTGCCATCAACTCTCCGTTCCCAC...TGACCCGCCAGGGACTCTCCAAATACCTAGAACCTCTCTAGTGTGGGCAGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR TCA 90 bp GCTCCAGGACGTTCTTCACAGCACCATGGATCTGGTAGTGGAAGGTCTCATTCCAGGTCCACTGCTCTCTaGGGCAGCAGAGCCAGTGGG +
Preference number: 4 (lower is better)
Translates to: APGRSSQHHGSGSGRSHSRSTAL*GSRASG
Trigger: CCCACTGGCTCTGCTGCCTCAGAGAGCAGTGGACCT...GGAATGAGACCTTCCACTACCAGATCCATGGTGCTGTGAAGAACGTCCTGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290497.11
CDS-3UTR TCA 90 bp GGAAGCAGATCCTGCACAGAGTCCCCATCGCTCCTCCCTCTACAAGCCCTGACCCTCCACACCCCGCTGTaGAATGAGTGCTGTTCTCTT +
Preference number: 4 (lower is better)
Translates to: GSRSCTESPSLLPLQALTLHTPL*NECCSL
Trigger: AAGAGAACAGCACTCATTTCACAGCGGGGTGTGGAG...GGTCAGGGCTTGTAGAGGGAGGAGCGATGGGGACTCTGTGCAGGATCTGCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
CDS-3UTR TCA 90 bp TACCACTCCAGGAAGCTGAGGCCCGAGCCGGCGGTCTTTAGGAAGATCTCATCCTCCAGGTTCGAAGAGTaGAGCCTGGGTAACTGGCAG +
Preference number: 4 (lower is better)
Translates to: YHSRKLRPEPAVFRKISSSRFEE*SLGNWQ
Trigger: CTGCCAGTTACCCAGGCTTCACTCTTCGAACCTGGA...GGATGAGATCTTCCTAAAGACCGCCGGCTCGGGCCTCAGCTTCCTGGAGTGGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR TCA 90 bp CTAGAGCCGTACTCTTCCCGTGGGGCTGTCCCATCTCCCCGGAGCGTGCCCTGGGAGACTATATTTGCATaGTGTGGCCACTACACACAT +
Preference number: 4 (lower is better)
Translates to: LEPYSSRGAVPSPRSVPWETIFA*CGHYTH
Trigger: ATGTGTGTAGTGGCCACATCATGCAAATATAGTCTC...CCAGGGCACGCTCCGGGGAGATGGGACAGCCCCACGGGAAGAGTACGGCTCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290497.11
CDS-3UTR GCA 90 bp TCAAAGCCAAGGCGTAGGTCTAGGTCCCCGGAGCTCATTTCCACCTTCATGCTCGCAGGGAACCCTGCCTaGGCTCCTCTGGTTGCACAA +
Preference number: 4 (lower is better)
Translates to: SKPRRRSRSPELISTFMLAGNPA*APLVAQ
Trigger: TTGTGCAACCAGAGGAGCGCAGGCAGGGTTCCCTGC...GAGCATGAAGGTGGAAATGAGCTCCGGGGACCTAGACCTACGCCTTGGCTTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290497.11
CDS-3UTR GCA 90 bp AGGGTTCTCCTCCTGGTACAGGAGATACTCAACAAGGAGGCCCCAGAGGTCGATGGGCAGCATCTTGTCTaGCAGCCACCTTGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: RVLLLVQEILNKEAPEVDGQHLV*QPPWPE
Trigger: CTCTGGCCAAGGTGGCTGGCAGACAAGATGCTGCCC...ATCGACCTCTGGGGCCTCCTTGTTGAGTATCTCCTGTACCAGGAGGAGAACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR GCA 90 bp ACAAGGAGAGCCCTGCCCCAGTCCAAGCTGCAATTCTGCAAGAGCTTTCCGGGGCTGTCCAGAAACTCCTaGTCCCCGTCAGAGAGGTCA +
Preference number: 4 (lower is better)
Translates to: TRRALPQSKLQFCKSFPGLSRNS*SPSERS
Trigger: TGACCTCTCTGACGGGGAGCAGGAGTTTCTGGACAG...CCCCGGAAAGCTCTTGCAGAATTGCAGCTTGGACTGGGGCAGGGCTCTCCTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR GCA 90 bp CAGCCCCTCATTGTTCTTGATAGCAGTGCATCCAGGAGCTCGAGGTGGGGTTGGGCAACCCTGCCAGGCTaGCGTACAGAGAAGACATGG +
Preference number: 4 (lower is better)
Translates to: QPLIVLDSSASRSSRWGWATLPG*RTEKTW
Trigger: CCATGTCTTCTCTGTACGGCAGCCTGGCAGGGTTGC...CCAACCCCACCTCGAGCTCCTGGATGCACTGCTATCAAGAACAATGAGGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR GCA 90 bp AGAGTCCCCATCGCTCCTCCCTCTACAAGCCCTGACCATGAGCAGTGTGTCTCCCTCCCATCTTACTGCTaGAGACGTGAACCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: RVPIAPPSTSPDHEQCVSLPSYC*RREPGH
Trigger: GTGCCCAGGTTCACGTCTGCAGCAGTAAGATGGGAG...GGAGACACACTGCTCATGGTCAGGGCTTGTAGAGGGAGGAGCGATGGGGACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR GCA 90 bp GGCCACTGTCCAGAGCCTCACTCAATCCCAGCACTTGCTGCAGGGCCTTGGACAAAGCTCCCATCTTACTaGTGCAGACGTGAACCTGGG +
Preference number: 4 (lower is better)
Translates to: GHCPEPHSIPALAAGPWTKLPSY*CRREPG
Trigger: CCCAGGTTCACGTCTGCAGCAGTAAGATGGGAGCTT...TGTCCAAGGCCCTGCAGCAAGTGCTGGGATTGAGTGAGGCTCTGGACAGTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR GCA 90 bp GTTGGTGCGGACGTTGACACTGGTGTAAATGGGGTAAGGGTTCTGACCCTGGCGTGGTGGCAAAGGCGCTaGCCCACATACCTTGCAGGT +
Preference number: 4 (lower is better)
Translates to: VGADVDTGVNGVRVLTLAWWQRR*PTYLAG
Trigger: ACCTGCAAGGTATGTGGGGCAGCGCCTTTGCCACCA...CGCCAGGGTCAGAACCCTTACCCCATTTACACCAGTGTCAACGTCCGCACCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR GCA 90 bp AGGGCGCACTTCAAGGTCTCCACGTTGTTCAGGACGTTGTATCGACTGAGGGCCTGGTGGCAAAGGCGCTaGCCCACATACCTTGCAGGT +
Preference number: 4 (lower is better)
Translates to: RAHFKVSTLFRTLYRLRAWWQRR*PTYLAG
Trigger: ACCTGCAAGGTATGTGGGGCAGCGCCTTTGCCACCA...GGCCCTCAGTCGATACAACGTCCTGAACAACGTGGAGACCTTGAAGTGCGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR GCA 90 bp CAGATCCTGCACAGAGTCCCCATCGCTCCTCCCTCTACAAGCCCTGACCATGAGAGGCCACGAACTCCCTaGCAGCCACATAGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: QILHRVPIAPPSTSPDHERPRTP*QPHSPC
Trigger: ACAAGGACTATGTGGCTGGCAGGGAGTTCGTGGCCT...CTCATGGTCAGGGCTTGTAGAGGGAGGAGCGATGGGGACTCTGTGCAGGATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
CDS-3UTR GCA 90 bp AGGGCGCACTTCAAGGTCTCCACGTTGTTCAGGACGTTGTATCGACTGAGGGCCTTAACCAGGGGGAAGTaGAGCACAATGGGGGAGCGG +
Preference number: 4 (lower is better)
Translates to: RAHFKVSTLFRTLYRLRALTRGK*STMGER
Trigger: CCGCTCCCCCATTGTGCTGCACTTCCCCCTGGTTAA...GGCCCTCAGTCGATACAACGTCCTGAACAACGTGGAGACCTTGAAGTGCGCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000562320.1
ENST00000569985.5
CDS-3UTR GCA 90 bp ACAGAGTCCCCATCGCTCCTCCCTCTACAAGCCCTGACCATGAGCAGTGTGTCTTTAACCAGGGGGAAGTaGAGCACAATGGGGGAGCGG +
Preference number: 4 (lower is better)
Translates to: TESPSLLPLQALTMSSVSLTRGK*STMGER
Trigger: CCGCTCCCCCATTGTGCTGCACTTCCCCCTGGTTAA...AGACACACTGCTCATGGTCAGGGCTTGTAGAGGGAGGAGCGATGGGGACTCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
CDS-3UTR GCA 90 bp ACATCCCCAAGAGTCCCTGGAGCGATCTACTGCCCATCTTCTCCAAAAACACACCAGTCCTCCGCTTCCTaGCTTGGTCAGGCCCCTGCC +
Preference number: 4 (lower is better)
Translates to: TSPRVPGAIYCPSSPKTHQSSAS*LGQAPA
Trigger: GGCAGGGGCCTGACCAAGGCAGGAAGCGGAGGACTG...GTGTGTTTTTGGAGAAGATGGGCAGTAGATCGCTCCAGGGACTCTTGGGGATGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
CDS-3UTR GCA 90 bp AGAGTCCCCATCGCTCCTCCCTCTACAAGCCCTGACCATGAGCAGTGTGTCTCCACACAAGGAGAGCCCTaGCCCAGTCCAAGCTGCAAT +
Preference number: 4 (lower is better)
Translates to: RVPIAPPSTSPDHEQCVSTQGEP*PSPSCN
Trigger: ATTGCAGCTTGGACTGGGGCAGGGCTCTCCTTGTGT...GGAGACACACTGCTCATGGTCAGGGCTTGTAGAGGGAGGAGCGATGGGGACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
CDS-3UTR GCA 90 bp AGGGCGCACTTCAAGGTCTCCACGTTGTTCAGGACGTTGTATCGACTGAGGGCCCAGCTGGCTTCTCAGTaGCCTCAGCCCCTGTTCTGT +
Preference number: 4 (lower is better)
Translates to: RAHFKVSTLFRTLYRLRAQLASQ*PQPLFC
Trigger: ACAGAACAGGGGCTGAGGGCACTGAGAAGCCAGCTG...GGCCCTCAGTCGATACAACGTCCTGAACAACGTGGAGACCTTGAAGTGCGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000562320.1
ENST00000569985.5
CDS-3UTR GCA 90 bp CAAGGTCTCCACGTTGTTCAGGACGTTGTATCGACTGAGGGCCACCAGCCGATAGGGCTTGGGCCGCTCTaGAGGAAGTGTGGATGGATG +
Preference number: 4 (lower is better)
Translates to: QGLHVVQDVVSTEGHQPIGLGPL*RKCGWM
Trigger: CATCCATCCACACTTCCTGCAGAGCGGCCCAAGCCC...TATCGGCTGGTGGCCCTCAGTCGATACAACGTCCTGAACAACGTGGAGACCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000562320.1
ENST00000569985.5
CDS-3UTR GCA 90 bp GCTGTTCTCTTCTGCCCTACATCCCCAAGAGTCCCTGGAGCGATCTACTGCCCACCTCTGCACTGCCCATaGCTTGGAGTAACCCACCTC +
Preference number: 4 (lower is better)
Translates to: AVLFCPTSPRVPGAIYCPPLHCP*LGVTHL
Trigger: GAGGTGGGTTACTCCAAGGCATGGGCAGTGCAGAGG...TGGGCAGTAGATCGCTCCAGGGACTCTTGGGGATGTAGGGCAGAAGAGAACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR GCA 90 bp TCTCTTCTGCCCTACATCCCCAAGAGTCCCTGGAGCGATCTACTGCCCATCTTCCTCCTTCACAAGCCTTaGTGGCCTGCGGGGACAGAC +
Preference number: 4 (lower is better)
Translates to: SLLPYIPKSPWSDLLPIFLLHKP*WPAGTD
Trigger: GTCTGTCCCCGCAGGCCAGCAAGGCTTGTGAAGGAG...GAAGATGGGCAGTAGATCGCTCCAGGGACTCTTGGGGATGTAGGGCAGAAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR CCA 90 bp TGGCTTCTCGTAGGCTCCAGGCACTGCCAGCTGGAGCTGCCTAGAGCCGTACTCATCCTGGTGGTTGAGTaGGAAGGTGTGTTTGTGAGG +
Preference number: 4 (lower is better)
Translates to: WLLVGSRHCQLELPRAVLILVVE*EGVFVR
Trigger: CCTCACAAACACACCTTCCCACTCAACCACCAGGAT...GAGTACGGCTCTAGGCAGCTCCAGCTGGCAGTGCCTGGAGCCTACGAGAAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290497.11
CDS-3UTR CCA 90 bp ACGCGCACATCTCCCACCTGGAGCAGCCAGAATGGGACATCACCCCACAGGCTTCCTGGAGCTCAGCACTaGGTTCACGTGGAAGGTAAA +
Preference number: 4 (lower is better)
Translates to: TRTSPTWSSQNGTSPHRLPGAQH*VHVEGK
Trigger: TTTACCTTCCACGTGAACCCAGTGCTGAGCTCCAGG...AAGCCTGTGGGGTGATGTCCCATTCTGGCTGCTCCAGGTGGGAGATGTGCGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR CCA 90 bp GGTTCTAGGTATTTGGAGAGTCCCTGGCGGGTCAGGGGAAATGGAGAAGAGGGAGCCACTACAGGCACCTaGCCACTGTCCAGAGCCTCA +
Preference number: 4 (lower is better)
Translates to: GSRYLESPWRVRGNGEEGATTGT*PLSRAS
Trigger: TGAGGCTCTGGACAGTGGCCAGGTGCCTGTAGTGGC...TCCCTCTTCTCCATTTCCCCTGACCCGCCAGGGACTCTCCAAATACCTAGAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR CCA 90 bp ATCGCTCCTCCCTCTACAAGCCCTGACCATGAGCAGTGTGTCTCCTCTCTGTCAGCCACTACAGGCACCTaGCCACTGTCCAGAGCCTCA +
Preference number: 4 (lower is better)
Translates to: IAPPSTSPDHEQCVSSLSATTGT*PLSRAS
Trigger: TGAGGCTCTGGACAGTGGCCAGGTGCCTGTAGTGGC...TGACAGAGAGGAGACACACTGCTCATGGTCAGGGCTTGTAGAGGGAGGAGCGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR CCA 90 bp AGGGTTCTCCTCCTGGTACAGGAGATACTCAACAAGGAGGCCCCAGAGGTCGATCACCTGGGACCAGGCTaGGTCCCTGTAGAGTGTGGA +
Preference number: 4 (lower is better)
Translates to: RVLLLVQEILNKEAPEVDHLGPG*VPVECG
Trigger: TCCACACTCTACAGGGACCCAGCCTGGTCCCAGGTG...ATCGACCTCTGGGGCCTCCTTGTTGAGTATCTCCTGTACCAGGAGGAGAACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR CCA 90 bp GGAAGCAGATCCTGCACAGAGTCCCCATCGCTCCTCCCTCTACAAGCCCTGACCGTGAAGTTAAAGCTCTaGGCGGAAGTGAAGCGGGAG +
Preference number: 4 (lower is better)
Translates to: GSRSCTESPSLLPLQALTVKLKL*AEVKRE
Trigger: CTCCCGCTTCACTTCCGCCCAGAGCTTTAACTTCAC...GGTCAGGGCTTGTAGAGGGAGGAGCGATGGGGACTCTGTGCAGGATCTGCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
CDS-3UTR CCA 90 bp CTCTTCTGCCCTACATCCCCAAGAGTCCCTGGAGCGATCTACTGCCCATCTTCTTTGTCGCTCCACACCTaGGGCCAGGTGTGTGCGGAA +
Preference number: 4 (lower is better)
Translates to: LFCPTSPRVPGAIYCPSSLSLHT*GQVCAE
Trigger: TTCCGCACACACCTGGCCCCAGGTGTGGAGCGACAA...AGAAGATGGGCAGTAGATCGCTCCAGGGACTCTTGGGGATGTAGGGCAGAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
CDS-3UTR CCA 90 bp CATCCCCTCAGCCCCTCATTGTTCTTGATAGCAGTGCATCCAGGAGCTCGAGGTTTGTCGCTCCACACCTaGGGCCAGGTGTGTGCGGAA +
Preference number: 4 (lower is better)
Translates to: HPLSPSLFLIAVHPGARGLSLHT*GQVCAE
Trigger: TTCCGCACACACCTGGCCCCAGGTGTGGAGCGACAA...ACCTCGAGCTCCTGGATGCACTGCTATCAAGAACAATGAGGGGCTGAGGGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
CDS-3UTR CCA 90 bp ACGCGCACATCTCCCACCTGGAGCAGCCAGAATGGGACATCACCCCACAGGCTTGCCATAGGGGGTGTCTaGCCTGTTGATGACAAAGTC +
Preference number: 4 (lower is better)
Translates to: TRTSPTWSSQNGTSPHRLAIGGV*PVDDKV
Trigger: GACTTTGTCATCAACAGGCCAGACACCCCCTATGGC...AAGCCTGTGGGGTGATGTCCCATTCTGGCTGCTCCAGGTGGGAGATGTGCGCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
CDS-3UTR CCA 90 bp ACAAGGAGAGCCCTGCCCCAGTCCAAGCTGCAATTCTGCAAGAGCTTTCCGGGGTGTAAGGAGGACAGCTaGCTTCTCAGTGCCCTCAGC +
Preference number: 4 (lower is better)
Translates to: TRRALPQSKLQFCKSFPGCKEDS*LLSALS
Trigger: GCTGAGGGCACTGAGAAGCCAGCTGTCCTCCTTACA...CCCCGGAAAGCTCTTGCAGAATTGCAGCTTGGACTGGGGCAGGGCTCTCCTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
CDS-3UTR CCA 90 bp AGCGGGGGTCCTCAGCCTTGGCAAACAGATAGCACTCACGGGCCTCCTCCATGTTCGAAGAGTGAAGCCTaGGTAACTGGCAGGGAGACA +
Preference number: 4 (lower is better)
Translates to: SGGPQPWQTDSTHGPPPCSKSEA*VTGRET
Trigger: TGTCTCCCTGCCAGTTACCCAGGCTTCACTCTTCGA...ACATGGAGGAGGCCCGTGAGTGCTATCTGTTTGCCAAGGCTGAGGACCCCCGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000562320.1
ENST00000569985.5
CDS-3UTR CCA 90 bp CTCATTCCACTCGGGGTCACTGCAGTTGGCCACTATCCTAGTCTGGGCAGGGCTGGTTGCACAAACTGCTaGCTCAGGTGTGACAGGCAG +
Preference number: 4 (lower is better)
Translates to: LIPLGVTAVGHYPSLGRAGCTNC*LRCDRQ
Trigger: CTGCCTGTCACACCTGAGCCAGCAGTTTGTGCAACC...AGCCCTGCCCAGACTAGGATAGTGGCCAACTGCAGTGACCCCGAGTGGAATGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565553.1
CDS-3UTR CCA 90 bp CAGCCCCTCATTGTTCTTGATAGCAGTGCATCCAGGAGCTCGAGGTGGGGTTGGTGCCCCGGATGTTTGTaGCCCTCAGCACCTTCACCT +
Preference number: 4 (lower is better)
Translates to: QPLIVLDSSASRSSRWGWCPGCL*PSAPSP
Trigger: AGGTGAAGGTGCTGAGGGCCACAAACATCCGGGGCA...CCAACCCCACCTCGAGCTCCTGGATGCACTGCTATCAAGAACAATGAGGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397272.7
ENST00000569985.5
CDS-3UTR CCA 90 bp ACAGAGTCCCCATCGCTCCTCCCTCTACAAGCCCTGACCATGAGCAGTGTGTCTCTGTGTGAGAGAGCATaGAGCAGGGGGTGCAGCCAA +
Preference number: 4 (lower is better)
Translates to: TESPSLLPLQALTMSSVSLCERA*SRGCSQ
Trigger: TTGGCTGCACCCCCTGCTCCATGCTCTCTCACACAG...AGACACACTGCTCATGGTCAGGGCTTGTAGAGGGAGGAGCGATGGGGACTCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397272.7
3UTR CAA 72 bp GATGACAAAGTCCCCAAAGGCCTTCTCCTCAGCTGTTaGTCGCTCCACACCTGGGGCCAGGTGTGTGCGGAA +
Preference number: 4 (lower is better)
Translates to: DDKVPKGLLLSC*SLHTWGQVCAE
Trigger: TTCCGCACACACCTGGCCCCAGGTGTGGAGCGACAAACAGCTGAGGAGAAGGCCTTTGGGGACTTTGTCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000562320.1
ENST00000569985.5
CDS-3UTR TCA 90 bp GGACAAAGCTCCCATCTTACTGCTGCAGACGTGAACCTGGGCACGCTCAATGGGTTACTGCTGCAGACGTaGACCTGGGCACGCTCAATG +
Preference number: 4 (lower is better)
Translates to: GQSSHLTAADVNLGTLNGLLLQT*TWARSM
Trigger: CATTGAGCGTGCCCAGGTTCACGTCTGCAGCAGTAA...CCCATTGAGCGTGCCCAGGTTCACGTCTGCAGCAGTAAGATGGGAGCTTTGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR TCA 90 bp GTGGCATTGCCTACACTTCTGTGTGAGAAGGTCCCCGCCCACTCTGCACAAGCCAGTTGGTGCGGACGTTaGCACTGGTGTAAATGGGGT +
Preference number: 4 (lower is better)
Translates to: VALPTLLCEKVPAHSAQASWCGR*HWCKWG
Trigger: ACCCCATTTACACCAGTGTCAACGTCCGCACCAACT...GGCTTGTGCAGAGTGGGCGGGGACCTTCTCACACAGAAGTGTAGGCAATGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR TCA 90 bp ACAGAGTCCCCATCGCTCCTCCCTCTACAAGCCCTGACCATGAGCAGTGTGTCTCAACCTCATAGGGCGTaGACTCGCACCACTCTGCAA +
Preference number: 4 (lower is better)
Translates to: TESPSLLPLQALTMSSVSQPHRA*TRTTLQ
Trigger: TTGCAGAGTGGTGCGAGTTCACGCCCTATGAGGTTG...AGACACACTGCTCATGGTCAGGGCTTGTAGAGGGAGGAGCGATGGGGACTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR TCA 90 bp ACAAGGAGAGCCCTGCCCCAGTCCAAGCTGCAATTCTGCAAGAGCTTTCCGGGGGCAGCAATCGTCCCATaGAGAGTTCTGAGCCGAAGA +
Preference number: 4 (lower is better)
Translates to: TRRALPQSKLQFCKSFPGAAIVP*RVLSRR
Trigger: TCTTCGGCTCAGAACTCTTCATGGGACGATTGCTGC...CCCCGGAAAGCTCTTGCAGAATTGCAGCTTGGACTGGGGCAGGGCTCTCCTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR TCA 90 bp GGTCCAGAGCCAGCTGGAGGGCGCACTTCAAGGTCTCCACGTTGTTCAGGACGTTCTGGCAGTCGTCTGTaGTATTCACACTGCCTCTGT +
Preference number: 4 (lower is better)
Translates to: GPEPAGGRTSRSPRCSGRSGSRL*YSHCLC
Trigger: ACAGAGGCAGTGTGAATATCACAGACGACTGCCAGA...ACGTCCTGAACAACGTGGAGACCTTGAAGTGCGCCCTCCAGCTGGCTCTGGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR TCA 90 bp CAGCACAATGGGGGAGCGGGGGTCCTCAGCCTTGGCAAACAGATAGCACTCACGAGTCAAAGGACAGAATaGGGTCCACTGCTCTCTGAG +
Preference number: 4 (lower is better)
Translates to: QHNGGAGVLSLGKQIALTSQRTE*GPLLSE
Trigger: CTCAGAGAGCAGTGGACCTCATTCTGTCCTTTGACT...CGTGAGTGCTATCTGTTTGCCAAGGCTGAGGACCCCCGCTCCCCCATTGTGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR TCA 90 bp GTTGGTGCGGACGTTGACACTGGTGTAAATGGGGTAAGGGTTCTGACCCTGGCGCACCCCGCTGTGAAATaGGTGCTGTTCTCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: VGADVDTGVNGVRVLTLAHPAVK*VLFSSA
Trigger: GGCAGAAGAGAACAGCACTCATTTCACAGCGGGGTG...CGCCAGGGTCAGAACCCTTACCCCATTTACACCAGTGTCAACGTCCGCACCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR TCA 90 bp GTGGCATTGCCTACACTTCTGTGTGAGAAGGTCCCCGCCCACTCTGCACAAGCCCTCCACACCCCGCTGTaGAATGAGTGCTGTTCTCTT +
Preference number: 4 (lower is better)
Translates to: VALPTLLCEKVPAHSAQALHTPL*NECCSL
Trigger: AAGAGAACAGCACTCATTTCACAGCGGGGTGTGGAG...GGCTTGTGCAGAGTGGGCGGGGACCTTCTCACACAGAAGTGTAGGCAATGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR TCA 90 bp CAGCCCCTCATTGTTCTTGATAGCAGTGCATCCAGGAGCTCGAGGTGGGGTTGGTCCAGGTTCGAAGAGTaGAGCCTGGGTAACTGGCAG +
Preference number: 4 (lower is better)
Translates to: QPLIVLDSSASRSSRWGWSRFEE*SLGNWQ
Trigger: CTGCCAGTTACCCAGGCTTCACTCTTCGAACCTGGA...CCAACCCCACCTCGAGCTCCTGGATGCACTGCTATCAAGAACAATGAGGGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
CDS-3UTR GCA 90 bp TATTTGCATGATGTGGCCACTACACACATCACCAGAGACTGTGGTCCAGGTTCGCCCAGCAGGGAACCCTaGCTGCGCTCCTCTGGTTGC +
Preference number: 4 (lower is better)
Translates to: YLHDVATTHITRDCGPGSPSREP*LRSSGC
Trigger: GCAACCAGAGGAGCGCAGGCAGGGTTCCCTGCTGGG...CGAACCTGGACCACAGTCTCTGGTGATGTGTGTAGTGGCCACATCATGCAAATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR GCA 90 bp GATGGATGCATCTCTGCTTTCCATCTCAGTGTAAGGAGGACAGCTGGCTTCTCACCCAGCAGGGAACCCTaGCTGCGCTCCTCTGGTTGC +
Preference number: 4 (lower is better)
Translates to: DGCISAFHLSVRRTAGFSPSREP*LRSSGC
Trigger: GCAACCAGAGGAGCGCAGGCAGGGTTCCCTGCTGGG...TGAGAAGCCAGCTGTCCTCCTTACACTGAGATGGAAAGCAGAGATGCATCCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR GCA 90 bp TGGCCACACTTGAGGCTTCTCAGGTCAAACAGGAGCAGAGAGAGCTGGTCGCTGGAGAGAGCTGGTCGCTaGCCAGGATGTCCTTGTCAT +
Preference number: 4 (lower is better)
Translates to: WPHLRLLRSNRSRESWSLERAGR*PGCPCH
Trigger: ATGACAAGGACATCCTGGGCAGCGACCAGCTCTCTC...CAGCGACCAGCTCTCTCTGCTCCTGTTTGACCTGAGAAGCCTCAAGTGTGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000565553.1
CDS-3UTR GCA 90 bp ATTCTCTCCACACCCCGCTGTGAAATGAGTGCTGTTCTCTTCTGCCCTACATCCCCCCCTCGCCCAGCTTaGTGGTCTGAGCCTCCAACT +
Preference number: 4 (lower is better)
Translates to: ILSTPRCEMSAVLFCPTSPPRPA*WSEPPT
Trigger: AGTTGGAGGCTCAGACCAGCAAGCTGGGCGAGGGGG...GGATGTAGGGCAGAAGAGAACAGCACTCATTTCACAGCGGGGTGTGGAGAGAAT
57% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR GCA 90 bp CATCCCCTCAGCCCCTCATTGTTCTTGATAGCAGTGCATCCAGGAGCTCGAGGTAATCCCAGCACTTGCTaGAGGGCCTTGGACACGACC +
Preference number: 4 (lower is better)
Translates to: HPLSPSLFLIAVHPGARGNPSTC*RALDTT
Trigger: GGTCGTGTCCAAGGCCCTGCAGCAAGTGCTGGGATT...ACCTCGAGCTCCTGGATGCACTGCTATCAAGAACAATGAGGGGCTGAGGGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR GCA 90 bp ATAGGGGGTGTCTGGCCTGTTGATGACAAAGTCCCCAAAGGCCTTCTCCTCAGCAATCCCAGCACTTGCTaGAGGGCCTTGGACACGACC +
Preference number: 4 (lower is better)
Translates to: IGGVWPVDDKVPKGLLLSNPSTC*RALDTT
Trigger: GGTCGTGTCCAAGGCCCTGCAGCAAGTGCTGGGATT...GCTGAGGAGAAGGCCTTTGGGGACTTTGTCATCAACAGGCCAGACACCCCCTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR GCA 90 bp TCTCTTCTGCCCTACATCCCCAAGAGTCCCTGGAGCGATCTACTGCCCATCTTCCTCAATCCCAGCACTTaGTGCAGGGCCTTGGACACG +
Preference number: 4 (lower is better)
Translates to: SLLPYIPKSPWSDLLPIFLNPST*CRALDT
Trigger: CGTGTCCAAGGCCCTGCAGCAAGTGCTGGGATTGAG...GAAGATGGGCAGTAGATCGCTCCAGGGACTCTTGGGGATGTAGGGCAGAAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR GCA 90 bp ACAGAGTCCCCATCGCTCCTCCCTCTACAAGCCCTGACCATGAGCAGTGTGTCTCTCCCATCTTACTGCTaGAGACGTGAACCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: TESPSLLPLQALTMSSVSLPSYC*RREPGH
Trigger: GTGCCCAGGTTCACGTCTGCAGCAGTAAGATGGGAG...AGACACACTGCTCATGGTCAGGGCTTGTAGAGGGAGGAGCGATGGGGACTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR GCA 90 bp GCTGGCCATCCCCTCAGCCCCTCATTGTTCTTGATAGCAGTGCATCCAGGAGCTGGTTCAGGCTGGAGCTaGAGCAATCGTCCCATGAAG +
Preference number: 4 (lower is better)
Translates to: AGHPLSPSLFLIAVHPGAGSGWS*SNRPMK
Trigger: CTTCATGGGACGATTGCTGCAGCTCCAGCCTGAACC...AGCTCCTGGATGCACTGCTATCAAGAACAATGAGGGGCTGAGGGGATGGCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR GCA 90 bp GTGCTGTTCTCTTCTGCCCTACATCCCCAAGAGTCCCTGGAGCGATCTACTGCCAGGCCACGAACTCCCTaGCAGCCACATAGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: VLFSSALHPQESLERSTARPRTP*QPHSPC
Trigger: ACAAGGACTATGTGGCTGGCAGGGAGTTCGTGGCCT...GGCAGTAGATCGCTCCAGGGACTCTTGGGGATGTAGGGCAGAAGAGAACAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
CDS-3UTR GCA 90 bp CTATATTTGCATGATGTGGCCACTACACACATCACCAGAGACTGTGGTCCAGGTCCTTGGTCAGGCCCCTaGCCTCTCCCGAGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: LYLHDVATTHITRDCGPGPWSGP*PLPSLV
Trigger: CACCAGGCTCGGGAGAGGGCAGGGGCCTGACCAAGG...ACCTGGACCACAGTCTCTGGTGATGTGTGTAGTGGCCACATCATGCAAATATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
CDS-3UTR GCA 90 bp TACCACTCCAGGAAGCTGAGGCCCGAGCCGGCGGTCTTTAGGAAGATCTCATCCTCCAAGCTGCAATTCTaGAAGAGCTTTCCGGGGCCT +
Preference number: 4 (lower is better)
Translates to: YHSRKLRPEPAVFRKISSSKLQF*KSFPGP
Trigger: AGGCCCCGGAAAGCTCTTGCAGAATTGCAGCTTGGA...GGATGAGATCTTCCTAAAGACCGCCGGCTCGGGCCTCAGCTTCCTGGAGTGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR GCA 90 bp GGCTTCCCAGCACAGGTGTTCCTGACAGCGTGTCTGTGTGAGAGAGCATGGAGCTCCAAGCTGCAATTCTaGAAGAGCTTTCCGGGGCCT +
Preference number: 4 (lower is better)
Translates to: GFPAQVFLTACLCERAWSSKLQF*KSFPGP
Trigger: AGGCCCCGGAAAGCTCTTGCAGAATTGCAGCTTGGA...GCTCCATGCTCTCTCACACAGACACGCTGTCAGGAACACCTGTGCTGGGAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR GCA 90 bp GAAGTGAAGCGGGAGGTGAATATGTCCAGCACAGCCTGGGAGAAGGGCCCCTGTTCCAAGCTGCAATTCTaGAAGAGCTTTCCGGGGCCT +
Preference number: 4 (lower is better)
Translates to: EVKREVNMSSTAWEKGPCSKLQF*KSFPGP
Trigger: AGGCCCCGGAAAGCTCTTGCAGAATTGCAGCTTGGA...ACAGGGGCCCTTCTCCCAGGCTGTGCTGGACATATTCACCTCCCGCTTCACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR GCA 90 bp ACAGAGTCCCCATCGCTCCTCCCTCTACAAGCCCTGACCATGAGCAGTGTGTCTACACAAGGAGAGCCCTaGCCCAGTCCAAGCTGCAAT +
Preference number: 4 (lower is better)
Translates to: TESPSLLPLQALTMSSVSTQGEP*PSPSCN
Trigger: ATTGCAGCTTGGACTGGGGCAGGGCTCTCCTTGTGT...AGACACACTGCTCATGGTCAGGGCTTGTAGAGGGAGGAGCGATGGGGACTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
CDS-3UTR GCA 90 bp ATCGCTCCTCCCTCTACAAGCCCTGACCATGAGCAGTGTGTCTCCTCTCTGTCAAGGCTCCCTCTGCACTaGCCATGCCTTGGAGTAACC +
Preference number: 4 (lower is better)
Translates to: IAPPSTSPDHEQCVSSLSRLPLH*PCLGVT
Trigger: GGTTACTCCAAGGCATGGGCAGTGCAGAGGGAGCCT...TGACAGAGAGGAGACACACTGCTCATGGTCAGGGCTTGTAGAGGGAGGAGCGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR GCA 90 bp ACATCCCCAAGAGTCCCTGGAGCGATCTACTGCCCATCTTCTCCAAAAACACACGGTCCCCGCCCACTCTaGACAAGCCCACGTTTGCCT +
Preference number: 4 (lower is better)
Translates to: TSPRVPGAIYCPSSPKTHGPRPL*TSPRLP
Trigger: AGGCAAACGTGGGCTTGTGCAGAGTGGGCGGGGACC...GTGTGTTTTTGGAGAAGATGGGCAGTAGATCGCTCCAGGGACTCTTGGGGATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR CCA 90 bp CTATATTTGCATGATGTGGCCACTACACACATCACCAGAGACTGTGGTCCAGGTTGCCCAAAGCATGGCTaGGCAGCCCGGGCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: LYLHDVATTHITRDCGPGCPKHG*AARAPA
Trigger: TGCTGGGGCCCGGGCTGCCCAGCCATGCTTTGGGCA...ACCTGGACCACAGTCTCTGGTGATGTGTGTAGTGGCCACATCATGCAAATATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR CCA 90 bp ATAGGGGGTGTCTGGCCTGTTGATGACAAAGTCCCCAAAGGCCTTCTCCTCAGCCATAGCAGTCGGCTTTaGACACCGCCAGTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: IGGVWPVDDKVPKGLLLSHSSRL*TPPVPP
Trigger: TGGAGGCACTGGCGGTGTCCAAAGCCGACTGCTATG...GCTGAGGAGAAGGCCTTTGGGGACTTTGTCATCAACAGGCCAGACACCCCCTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290497.11
CDS-3UTR CCA 90 bp ACGCGCACATCTCCCACCTGGAGCAGCCAGAATGGGACATCACCCCACAGGCTTATCCTGGTGGTTGAGTaGGAAGGTGTGTTTGTGAGG +
Preference number: 4 (lower is better)
Translates to: TRTSPTWSSQNGTSPHRLILVVE*EGVFVR
Trigger: CCTCACAAACACACCTTCCCACTCAACCACCAGGAT...AAGCCTGTGGGGTGATGTCCCATTCTGGCTGCTCCAGGTGGGAGATGTGCGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR CCA 90 bp TGGCTTCTCGTAGGCTCCAGGCACTGCCAGCTGGAGCTGCCTAGAGCCGTACTCTCAGATGCAGGCACCTaGCTCTTCTCCAGAACAAAT +
Preference number: 4 (lower is better)
Translates to: WLLVGSRHCQLELPRAVLSDAGT*LFSRTN
Trigger: ATTTGTTCTGGAGAAGAGCCAGGTGCCTGCATCTGA...GAGTACGGCTCTAGGCAGCTCCAGCTGGCAGTGCCTGGAGCCTACGAGAAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000561627.5
CDS-3UTR CCA 90 bp GCAGTGTGTCTCCTCTCTGTCACAGTCCTCCGCTTCCTGCCTTGGTCAGGCCCCTCAGATGCAGGCACCTaGCTCTTCTCCAGAACAAAT +
Preference number: 4 (lower is better)
Translates to: AVCLLSVTVLRFLPWSGPSDAGT*LFSRTN
Trigger: ATTTGTTCTGGAGAAGAGCCAGGTGCCTGCATCTGA...GGGGCCTGACCAAGGCAGGAAGCGGAGGACTGTGACAGAGAGGAGACACACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR CCA 90 bp GTTGGTGCGGACGTTGACACTGGTGTAAATGGGGTAAGGGTTCTGACCCTGGCGAGCACTGGGTTCACGTaGAAGGTAAAGGTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: VGADVDTGVNGVRVLTLASTGFT*KVKVGG
Trigger: CCCACCCACCTTTACCTTCCACGTGAACCCAGTGCT...CGCCAGGGTCAGAACCCTTACCCCATTTACACCAGTGTCAACGTCCGCACCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR CCA 90 bp TCCCCTCAGCCCCTCATTGTTCTTGATAGCAGTGCATCCAGGAGCTCGAGGTGGAGCACTGGGTTCACGTaGAAGGTAAAGGTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: SPQPLIVLDSSASRSSRWSTGFT*KVKVGG
Trigger: CCCACCCACCTTTACCTTCCACGTGAACCCAGTGCT...CCACCTCGAGCTCCTGGATGCACTGCTATCAAGAACAATGAGGGGCTGAGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR CCA 90 bp TATTTGCATGATGTGGCCACTACACACATCACCAGAGACTGTGGTCCAGGTTCGCCTGGGCACGCTCAATaGGGCCCTGCAAGGCCACCT +
Preference number: 4 (lower is better)
Translates to: YLHDVATTHITRDCGPGSPGHAQ*GPARPP
Trigger: AGGTGGCCTTGCAGGGCCCCATTGAGCGTGCCCAGG...CGAACCTGGACCACAGTCTCTGGTGATGTGTGTAGTGGCCACATCATGCAAATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR CCA 90 bp GATCTCCTCTTCACGAATCTGAGGGCTGCCCACACTAGAGAGGTTCTAGGTATTATGAGGGACACGCTGTaGCCACTGCGCTCCCGGACC +
Preference number: 4 (lower is better)
Translates to: DLLFTNLRAAHTREVLGIMRDTL*PLRSRT
Trigger: GGTCCGGGAGCGCAGTGGCCACAGCGTGTCCCTCAT...AATACCTAGAACCTCTCTAGTGTGGGCAGCCCTCAGATTCGTGAAGAGGAGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR CCA 90 bp AGCAGTGTTGATGACAATGGCCACAGCAGGAGCCAGATAAACTCCCAGATAAACCGCATGGGGGTGAGCTaGTTGGGGAAGGCGTCCGGG +
Preference number: 4 (lower is better)
Translates to: SSVDDNGHSRSQINSQINRMGVS*LGKASG
Trigger: CCCGGACGCCTTCCCCAACCAGCTCACCCCCATGCG...GTTTATCTGGGAGTTTATCTGGCTCCTGCTGTGGCCATTGTCATCAACACTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR CCA 90 bp AGCAGATCCTGCACAGAGTCCCCATCGCTCCTCCCTCTACAAGCCCTGACCATGGCCATAGGGGGTGTCTaGCCTGTTGATGACAAAGTC +
Preference number: 4 (lower is better)
Translates to: SRSCTESPSLLPLQALTMAIGGV*PVDDKV
Trigger: GACTTTGTCATCAACAGGCCAGACACCCCCTATGGC...CATGGTCAGGGCTTGTAGAGGGAGGAGCGATGGGGACTCTGTGCAGGATCTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
CDS-3UTR CCA 90 bp AGAGTCCCCATCGCTCCTCCCTCTACAAGCCCTGACCATGAGCAGTGTGTCTCCGCCATAGGGGGTGTCTaGCCTGTTGATGACAAAGTC +
Preference number: 4 (lower is better)
Translates to: RVPIAPPSTSPDHEQCVSAIGGV*PVDDKV
Trigger: GACTTTGTCATCAACAGGCCAGACACCCCCTATGGC...GGAGACACACTGCTCATGGTCAGGGCTTGTAGAGGGAGGAGCGATGGGGACTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
CDS-3UTR CCA 90 bp AGTGCTGTTCTCTTCTGCCCTACATCCCCAAGAGTCCCTGGAGCGATCTACTGCGCACTGCCCATGCCTTaGAGTAACCCACCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: SAVLFCPTSPRVPGAIYCALPMP*SNPPPG
Trigger: TCCTGGAGGTGGGTTACTCCAAGGCATGGGCAGTGC...GCAGTAGATCGCTCCAGGGACTCTTGGGGATGTAGGGCAGAAGAGAACAGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR CCA 90 bp CAGATCCTGCACAGAGTCCCCATCGCTCCTCCCTCTACAAGCCCTGACCATGAGCCCATTGGATGCATCTaGGAAAGAGGCAAGAGCCCA +
Preference number: 4 (lower is better)
Translates to: QILHRVPIAPPSTSPDHEPIGCI*ERGKSP
Trigger: TGGGCTCTTGCCTCTTTCCCAGATGCATCCAATGGG...CTCATGGTCAGGGCTTGTAGAGGGAGGAGCGATGGGGACTCTGTGCAGGATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR CCA 90 bp GACTGTGGTCCAGGTTCGAAGAGTGAAGCCTGGGTAACTGGCAGGGAGACACGCTATTTGGAGAGTCCCTaGCGGGTCAGGGGAAATGGA +
Preference number: 4 (lower is better)
Translates to: DCGPGSKSEAWVTGRETRYLESP*RVRGNG
Trigger: TCCATTTCCCCTGACCCGCCAGGGACTCTCCAAATA...GCGTGTCTCCCTGCCAGTTACCCAGGCTTCACTCTTCGAACCTGGACCACAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR CCA 90 bp AATGGCCACAGCAGGAGCCAGATAAACTCCCAGATAAACCTCTCACTGCTGAACGAGGCCGTGGCCAGATaGAGAGGGCCTGGCCAGAAC +
Preference number: 4 (lower is better)
Translates to: NGHSRSQINSQINLSLLNEAVAR*RGPGQN
Trigger: GTTCTGGCCAGGCCCTCTCCATCTGGCCACGGCCTC...GTTCAGCAGTGAGAGGTTTATCTGGGAGTTTATCTGGCTCCTGCTGTGGCCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR CCA 90 bp TTGCCTACACTTCTGTGTGAGAAGGTCCCCGCCCACTCTGCACAAGCCCACGTTCTTCTGGCCAATATCTaGGCCACAGCACTAGCCCAG +
Preference number: 4 (lower is better)
Translates to: LPTLLCEKVPAHSAQAHVLLANI*ATALAQ
Trigger: CTGGGCTAGTGCTGTGGCCCAGATATTGGCCAGAAG...AACGTGGGCTTGTGCAGAGTGGGCGGGGACCTTCTCACACAGAAGTGTAGGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR CCA 90 bp TCCCCTCAGCCCCTCATTGTTCTTGATAGCAGTGCATCCAGGAGCTCGAGGTGGCAGATTCAGTCTTGTTaGAGCCTCCCCATCCCTGGC +
Preference number: 4 (lower is better)
Translates to: SPQPLIVLDSSASRSSRWQIQSC*SLPIPG
Trigger: GCCAGGGATGGGGAGGCTCCAACAAGACTGAATCTG...CCACCTCGAGCTCCTGGATGCACTGCTATCAAGAACAATGAGGGGCTGAGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR CCA 90 bp GAGCCCTGCCCCAGTCCAAGCTGCAATTCTGCAAGAGCTTTCCGGGGCCTGGGGAATCTCCTACACTTGTaGCCCCCTTTTTCTTCCCTT +
Preference number: 4 (lower is better)
Translates to: EPCPSPSCNSARAFRGLGNLLHL*PPFSSL
Trigger: AAGGGAAGAAAAAGGGGGCCACAAGTGTAGGAGATT...CCCCAGGCCCCGGAAAGCTCTTGCAGAATTGCAGCTTGGACTGGGGCAGGGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR TCA 90 bp TCTCTTCTGCCCTACATCCCCAAGAGTCCCTGGAGCGATCTACTGCCCATCTTCTTACTGCTGCAGACGTaGACCTGGGCACGCTCAATG +
Preference number: 4 (lower is better)
Translates to: SLLPYIPKSPWSDLLPIFLLLQT*TWARSM
Trigger: CATTGAGCGTGCCCAGGTTCACGTCTGCAGCAGTAA...GAAGATGGGCAGTAGATCGCTCCAGGGACTCTTGGGGATGTAGGGCAGAAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR TCA 90 bp CAAGGTCTCCACGTTGTTCAGGACGTTGTATCGACTGAGGGCCACCAGCCGATATTACTGCTGCAGACGTaGACCTGGGCACGCTCAATG +
Preference number: 4 (lower is better)
Translates to: QGLHVVQDVVSTEGHQPILLLQT*TWARSM
Trigger: CATTGAGCGTGCCCAGGTTCACGTCTGCAGCAGTAA...TATCGGCTGGTGGCCCTCAGTCGATACAACGTCCTGAACAACGTGGAGACCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR TCA 90 bp TCCCCTCAGCCCCTCATTGTTCTTGATAGCAGTGCATCCAGGAGCTCGAGGTGGAGTTGGTGCGGACGTTaGCACTGGTGTAAATGGGGT +
Preference number: 4 (lower is better)
Translates to: SPQPLIVLDSSASRSSRWSWCGR*HWCKWG
Trigger: ACCCCATTTACACCAGTGTCAACGTCCGCACCAACT...CCACCTCGAGCTCCTGGATGCACTGCTATCAAGAACAATGAGGGGCTGAGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR TCA 90 bp TCCCCTCAGCCCCTCATTGTTCTTGATAGCAGTGCATCCAGGAGCTCGAGGTGGGCAGCAATCGTCCCATaGAGAGTTCTGAGCCGAAGA +
Preference number: 4 (lower is better)
Translates to: SPQPLIVLDSSASRSSRWAAIVP*RVLSRR
Trigger: TCTTCGGCTCAGAACTCTTCATGGGACGATTGCTGC...CCACCTCGAGCTCCTGGATGCACTGCTATCAAGAACAATGAGGGGCTGAGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR TCA 90 bp AGAGTCCCCATCGCTCCTCCCTCTACAAGCCCTGACCATGAGCAGTGTGTCTCCTCTGGCAGTCGTCTGTaGTATTCACACTGCCTCTGT +
Preference number: 4 (lower is better)
Translates to: RVPIAPPSTSPDHEQCVSSGSRL*YSHCLC
Trigger: ACAGAGGCAGTGTGAATATCACAGACGACTGCCAGA...GGAGACACACTGCTCATGGTCAGGGCTTGTAGAGGGAGGAGCGATGGGGACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR TCA 90 bp GATGGATGCATCTCTGCTTTCCATCTCAGTGTAAGGAGGACAGCTGGCTTCTCAAGGTCCACTGCTCTCTaGGGCAGCAGAGCCAGTGGG +
Preference number: 4 (lower is better)
Translates to: DGCISAFHLSVRRTAGFSRSTAL*GSRASG
Trigger: CCCACTGGCTCTGCTGCCTCAGAGAGCAGTGGACCT...TGAGAAGCCAGCTGTCCTCCTTACACTGAGATGGAAAGCAGAGATGCATCCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR TCA 90 bp GCCAGCTGGAGGGCGCACTTCAAGGTCTCCACGTTGTTCAGGACGTTGTATCGACTCCACACCCCGCTGTaGAATGAGTGCTGTTCTCTT +
Preference number: 4 (lower is better)
Translates to: ASWRAHFKVSTLFRTLYRLHTPL*NECCSL
Trigger: AAGAGAACAGCACTCATTTCACAGCGGGGTGTGGAG...TCGATACAACGTCCTGAACAACGTGGAGACCTTGAAGTGCGCCCTCCAGCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000562320.1
ENST00000569985.5
CDS-3UTR TCA 90 bp AGTGCTGTTCTCTTCTGCCCTACATCCCCAAGAGTCCCTGGAGCGATCTACTGCACACCTCTCCCCCGATaGACTGATGCCCCTACTAGA +
Preference number: 4 (lower is better)
Translates to: SAVLFCPTSPRVPGAIYCTPLPR*TDAPTR
Trigger: TCTAGTAGGGGCATCAGTTCATCGGGGGAGAGGTGT...GCAGTAGATCGCTCCAGGGACTCTTGGGGATGTAGGGCAGAAGAGAACAGCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR GCA 90 bp CCAGGACGTTCTTCACAGCACCATGGATCTGGTAGTGGAAGGTCTCATTCCACTCCACCTTGGCCAGAGTaGCCAAAGCATGGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: PGRSSQHHGSGSGRSHSTPPWPE*PKHGWA
Trigger: TGCCCAGCCATGCTTTGGGCACTCTGGCCAAGGTGG...AGTGGAATGAGACCTTCCACTACCAGATCCATGGTGCTGTGAAGAACGTCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000565553.1
CDS-3UTR GCA 90 bp ATTCTCTCCACACCCCGCTGTGAAATGAGTGCTGTTCTCTTCTGCCCTACATCCGGGCAGCATCTTGTCTaGCAGCCACCTTGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: ILSTPRCEMSAVLFCPTSGQHLV*QPPWPE
Trigger: CTCTGGCCAAGGTGGCTGGCAGACAAGATGCTGCCC...GGATGTAGGGCAGAAGAGAACAGCACTCATTTCACAGCGGGGTGTGGAGAGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR GCA 90 bp AGTGCTGTTCTCTTCTGCCCTACATCCCCAAGAGTCCCTGGAGCGATCTACTGCGCCTTGGACACGACCTaGTTCCTCCTGTCCAGAAAC +
Preference number: 4 (lower is better)
Translates to: SAVLFCPTSPRVPGAIYCALDTT*FLLSRN
Trigger: GTTTCTGGACAGGAGGAAGCAGGTCGTGTCCAAGGC...GCAGTAGATCGCTCCAGGGACTCTTGGGGATGTAGGGCAGAAGAGAACAGCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR GCA 90 bp ATTCTCTCCACACCCCGCTGTGAAATGAGTGCTGTTCTCTTCTGCCCTACATCCGAGCTCCTGCAACCCTaGCAGGCTGCCGTACAGAGA +
Preference number: 4 (lower is better)
Translates to: ILSTPRCEMSAVLFCPTSELLQP*QAAVQR
Trigger: TCTCTGTACGGCAGCCTGGCAGGGTTGCAGGAGCTC...GGATGTAGGGCAGAAGAGAACAGCACTCATTTCACAGCGGGGTGTGGAGAGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR GCA 90 bp CTGGAGGGCGCACTTCAAGGTCTCCACGTTGTTCAGGACGTTGTATCGACTGAGCTCCCATCTTACTGCTaGAGACGTGAACCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: LEGALQGLHVVQDVVSTELPSYC*RREPGH
Trigger: GTGCCCAGGTTCACGTCTGCAGCAGTAAGATGGGAG...CTCAGTCGATACAACGTCCTGAACAACGTGGAGACCTTGAAGTGCGCCCTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR GCA 90 bp GCCAGCTGGAGGGCGCACTTCAAGGTCTCCACGTTGTTCAGGACGTTGTATCGAAAGCTCCCATCTTACTaGTGCAGACGTGAACCTGGG +
Preference number: 4 (lower is better)
Translates to: ASWRAHFKVSTLFRTLYRKLPSY*CRREPG
Trigger: CCCAGGTTCACGTCTGCAGCAGTAAGATGGGAGCTT...TCGATACAACGTCCTGAACAACGTGGAGACCTTGAAGTGCGCCCTCCAGCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR GCA 90 bp CAAGGTCTCCACGTTGTTCAGGACGTTGTATCGACTGAGGGCCACCAGCCGATAAGGCCACGAACTCCCTaGCAGCCACATAGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: QGLHVVQDVVSTEGHQPIRPRTP*QPHSPC
Trigger: ACAAGGACTATGTGGCTGGCAGGGAGTTCGTGGCCT...TATCGGCTGGTGGCCCTCAGTCGATACAACGTCCTGAACAACGTGGAGACCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000562320.1
ENST00000569985.5
CDS-3UTR GCA 90 bp TCTCTTCTGCCCTACATCCCCAAGAGTCCCTGGAGCGATCTACTGCCCATCTTCCAGAATGAGGTCCACTaGTCTCTGAGGCAGCAGAGC +
Preference number: 4 (lower is better)
Translates to: SLLPYIPKSPWSDLLPIFQNEVH*SLRQQS
Trigger: GCTCTGCTGCCTCAGAGAGCAGTGGACCTCATTCTG...GAAGATGGGCAGTAGATCGCTCCAGGGACTCTTGGGGATGTAGGGCAGAAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR GCA 90 bp AGTGCTGTTCTCTTCTGCCCTACATCCCCAAGAGTCCCTGGAGCGATCTACTGCAAGGGAAGCAGATCCTaGACAGAGTCCCCATCGCTC +
Preference number: 4 (lower is better)
Translates to: SAVLFCPTSPRVPGAIYCKGSRS*TESPSL
Trigger: GAGCGATGGGGACTCTGTGCAGGATCTGCTTCCCTT...GCAGTAGATCGCTCCAGGGACTCTTGGGGATGTAGGGCAGAAGAGAACAGCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
CDS-3UTR GCA 90 bp ACGCGCACATCTCCCACCTGGAGCAGCCAGAATGGGACATCACCCCACAGGCTTCCTGGAGCGATCTACTaGCCATCTTCTCCAAAAACA +
Preference number: 4 (lower is better)
Translates to: TRTSPTWSSQNGTSPHRLPGAIY*PSSPKT
Trigger: TGTTTTTGGAGAAGATGGGCAGTAGATCGCTCCAGG...AAGCCTGTGGGGTGATGTCCCATTCTGGCTGCTCCAGGTGGGAGATGTGCGCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
CDS-3UTR GCA 90 bp GAAGTGCAGCACAATGGGGGAGCGGGGGTCCTCAGCCTTGGCAAACAGATAGCAAGTGCTGTTCTCTTCTaGCCTACATCCCCAAGAGTC +
Preference number: 4 (lower is better)
Translates to: EVQHNGGAGVLSLGKQIASAVLF*PTSPRV
Trigger: GACTCTTGGGGATGTAGGGCAGAAGAGAACAGCACT...TGCTATCTGTTTGCCAAGGCTGAGGACCCCCGCTCCCCCATTGTGCTGCACTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000562320.1
ENST00000569985.5
CDS-3UTR GCA 90 bp AAAGTCCTGGGGCTCATAGGTGAAGTTCATCATGCCATAGGGGGTGTCTGGCCTCAGCTGGCTTCTCAGTaGCCTCAGCCCCTGTTCTGT +
Preference number: 4 (lower is better)
Translates to: KVLGLIGEVHHAIGGVWPQLASQ*PQPLFC
Trigger: ACAGAACAGGGGCTGAGGGCACTGAGAAGCCAGCTG...AGGCCAGACACCCCCTATGGCATGATGAACTTCACCTATGAGCCCCAGGACTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000562320.1
ENST00000569985.5
CDS-3UTR GCA 90 bp TCCACACCTGGGGCCAGGTGTGTGCGGAAGGTACGGTTAACCAGGGGGAAGTGCGGATGGATGCATCTCTaGTTTCCATCTCAGTGTAAG +
Preference number: 4 (lower is better)
Translates to: STPGARCVRKVRLTRGKCGWMHL*FPSQCK
Trigger: CTTACACTGAGATGGAAAGCAGAGATGCATCCATCC...GCACTTCCCCCTGGTTAACCGTACCTTCCGCACACACCTGGCCCCAGGTGTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000562320.1
ENST00000569985.5
CDS-3UTR GCA 90 bp CCAGGACGTTCTTCACAGCACCATGGATCTGGTAGTGGAAGGTCTCATTCCACTGGGCTTGGGCCGCTCTaGAGGAAGTGTGGATGGATG +
Preference number: 4 (lower is better)
Translates to: PGRSSQHHGSGSGRSHSTGLGPL*RKCGWM
Trigger: CATCCATCCACACTTCCTGCAGAGCGGCCCAAGCCC...AGTGGAATGAGACCTTCCACTACCAGATCCATGGTGCTGTGAAGAACGTCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290497.11
CDS-3UTR GCA 90 bp ACATCCCCAAGAGTCCCTGGAGCGATCTACTGCCCATCTTCTCCAAAAACACACCCACCTCCAGGAACTTaGACACCCTCCTGCCCCACA +
Preference number: 4 (lower is better)
Translates to: TSPRVPGAIYCPSSPKTHPPPGT*TPSCPT
Trigger: TGTGGGGCAGGAGGGTGTGCAAGTTCCTGGAGGTGG...GTGTGTTTTTGGAGAAGATGGGCAGTAGATCGCTCCAGGGACTCTTGGGGATGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR GCA 90 bp CAGATCCTGCACAGAGTCCCCATCGCTCCTCCCTCTACAAGCCCTGACCATGAGCCCTTTTTCTTCCCTTaGCTCATGAGGAGCTCTGAC +
Preference number: 4 (lower is better)
Translates to: QILHRVPIAPPSTSPDHEPFFFP*LMRSSD
Trigger: GTCAGAGCTCCTCATGAGGCAAGGGAAGAAAAAGGG...CTCATGGTCAGGGCTTGTAGAGGGAGGAGCGATGGGGACTCTGTGCAGGATCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR GCA 90 bp AAGGTCCCCGCCCACTCTGCACAAGCCCACGTTTGCCTCCTTCACAAGCCTTGCTCTCCTCCAAAGCTATaGAGAGCCTTCCAACCTTTC +
Preference number: 4 (lower is better)
Translates to: KVPAHSAQAHVCLLHKPCSPPKL*RAFQPF
Trigger: GAAAGGTTGGAAGGCTCTGCATAGCTTTGGAGGAGA...GCAAGGCTTGTGAAGGAGGCAAACGTGGGCTTGTGCAGAGTGGGCGGGGACCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR CCA 90 bp GAAGTTCATCATGCCATAGGGGGTGTCTGGCCTGTTGATGACAAAGTCCCCAAAGGCTTGGGGACGCCGTaGGCAGCCACAGTTGCACAT +
Preference number: 4 (lower is better)
Translates to: EVHHAIGGVWPVDDKVPKGLGTP*AATVAH
Trigger: ATGTGCAACTGTGGCTGCCCACGGCGTCCCCAAGCC...TTTGGGGACTTTGTCATCAACAGGCCAGACACCCCCTATGGCATGATGAACTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR CCA 90 bp GATGGATGCATCTCTGCTTTCCATCTCAGTGTAAGGAGGACAGCTGGCTTCTCAGGAAGTGCAGCACAATaGGGGAGCGGGGGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: DGCISAFHLSVRRTAGFSGSAAQ*GSGGPQ
Trigger: CTGAGGACCCCCGCTCCCCCATTGTGCTGCACTTCC...TGAGAAGCCAGCTGTCCTCCTTACACTGAGATGGAAAGCAGAGATGCATCCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
CDS-3UTR CCA 90 bp ATGCATCTCTGCTTTCCATCTCAGTGTAAGGAGGACAGCTGGCTTCTCAGTGCCTTGTCGCTCCACACCTaGGGCCAGGTGTGTGCGGAA +
Preference number: 4 (lower is better)
Translates to: MHLCFPSQCKEDSWLLSALSLHT*GQVCAE
Trigger: TTCCGCACACACCTGGCCCCAGGTGTGGAGCGACAA...GGCACTGAGAAGCCAGCTGTCCTCCTTACACTGAGATGGAAAGCAGAGATGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
CDS-3UTR CCA 90 bp CTCTTCTGCCCTACATCCCCAAGAGTCCCTGGAGCGATCTACTGCCCATCTTCTTGTAAGGAGGACAGCTaGCTTCTCAGTGCCCTCAGC +
Preference number: 4 (lower is better)
Translates to: LFCPTSPRVPGAIYCPSSCKEDS*LLSALS
Trigger: GCTGAGGGCACTGAGAAGCCAGCTGTCCTCCTTACA...AGAAGATGGGCAGTAGATCGCTCCAGGGACTCTTGGGGATGTAGGGCAGAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
CDS-3UTR CCA 90 bp GTGCTGTTCTCTTCTGCCCTACATCCCCAAGAGTCCCTGGAGCGATCTACTGCCTCGAAGAGTGAAGCCTaGGTAACTGGCAGGGAGACA +
Preference number: 4 (lower is better)
Translates to: VLFSSALHPQESLERSTASKSEA*VTGRET
Trigger: TGTCTCCCTGCCAGTTACCCAGGCTTCACTCTTCGA...GGCAGTAGATCGCTCCAGGGACTCTTGGGGATGTAGGGCAGAAGAGAACAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
CDS-3UTR CCA 90 bp AAAGTCCTGGGGCTCATAGGTGAAGTTCATCATGCCATAGGGGGTGTCTGGCCTTGCCCCGGATGTTTGTaGCCCTCAGCACCTTCACCT +
Preference number: 4 (lower is better)
Translates to: KVLGLIGEVHHAIGGVWPCPGCL*PSAPSP
Trigger: AGGTGAAGGTGCTGAGGGCCACAAACATCCGGGGCA...AGGCCAGACACCCCCTATGGCATGATGAACTTCACCTATGAGCCCCAGGACTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000569985.5
CDS-3UTR TCA 90 bp ATCGCTCCTCCCTCTACAAGCCCTGACCATGAGCAGTGTGTCTCCTCTCTGTCACCTTGTCATAGAGGGTaGGCTCCAGGACGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: IAPPSTSPDHEQCVSSLSPCHRG*APGRSS
Trigger: TGAAGAACGTCCTGGAGCTCACCCTCTATGACAAGG...TGACAGAGAGGAGACACACTGCTCATGGTCAGGGCTTGTAGAGGGAGGAGCGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR TCA 90 bp GTGCTGTTCTCTTCTGCCCTACATCCCCAAGAGTCCCTGGAGCGATCTACTGCCGTGAATCCTGGTGGTTaGGTGGGAAGGTGTGTTTGT +
Preference number: 4 (lower is better)
Translates to: VLFSSALHPQESLERSTAVNPGG*VGRCVC
Trigger: ACAAACACACCTTCCCACTCAACCACCAGGATTCAC...GGCAGTAGATCGCTCCAGGGACTCTTGGGGATGTAGGGCAGAAGAGAACAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR TCA 90 bp ATCGCTCCTCCCTCTACAAGCCCTGACCATGAGCAGTGTGTCTCCTCTCTGTCAGCAGCAATCGTCCCATaGAGAGTTCTGAGCCGAAGA +
Preference number: 4 (lower is better)
Translates to: IAPPSTSPDHEQCVSSLSAAIVP*RVLSRR
Trigger: TCTTCGGCTCAGAACTCTTCATGGGACGATTGCTGC...TGACAGAGAGGAGACACACTGCTCATGGTCAGGGCTTGTAGAGGGAGGAGCGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR TCA 90 bp TGGCCACACTTGAGGCTTCTCAGGTCAAACAGGAGCAGAGAGAGCTGGTCGCTGAGTCAAAGGACAGAATaGGGTCCACTGCTCTCTGAG +
Preference number: 4 (lower is better)
Translates to: WPHLRLLRSNRSRESWSLSQRTE*GPLLSE
Trigger: CTCAGAGAGCAGTGGACCTCATTCTGTCCTTTGACT...CAGCGACCAGCTCTCTCTGCTCCTGTTTGACCTGAGAAGCCTCAAGTGTGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290497.11
CDS-3UTR TCA 90 bp CATCCCCTCAGCCCCTCATTGTTCTTGATAGCAGTGCATCCAGGAGCTCGAGGTCCTGGGGCTCATAGGTaGAGTTCATCATGCCATAGG +
Preference number: 4 (lower is better)
Translates to: HPLSPSLFLIAVHPGARGPGAHR*SSSCHR
Trigger: CCTATGGCATGATGAACTTCACCTATGAGCCCCAGG...ACCTCGAGCTCCTGGATGCACTGCTATCAAGAACAATGAGGGGCTGAGGGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
CDS-3UTR TCA 90 bp CTCTTCTGCCCTACATCCCCAAGAGTCCCTGGAGCGATCTACTGCCCATCTTCTCCTGGGGCTCATAGGTaGAGTTCATCATGCCATAGG +
Preference number: 4 (lower is better)
Translates to: LFCPTSPRVPGAIYCPSSPGAHR*SSSCHR
Trigger: CCTATGGCATGATGAACTTCACCTATGAGCCCCAGG...AGAAGATGGGCAGTAGATCGCTCCAGGGACTCTTGGGGATGTAGGGCAGAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
CDS-3UTR TCA 90 bp TATTTGCATGATGTGGCCACTACACACATCACCAGAGACTGTGGTCCAGGTTCGAGGACTTGGGCCCTCTaGGGTCCTTCTGTGTCTGGG +
Preference number: 4 (lower is better)
Translates to: YLHDVATTHITRDCGPGSRTWAL*GPSVSG
Trigger: CCCAGACACAGAAGGACCTCAGAGGGCCCAAGTCCT...CGAACCTGGACCACAGTCTCTGGTGATGTGTGTAGTGGCCACATCATGCAAATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
CDS-3UTR TCA 90 bp AGGGTTCTGACCCTGGCGGACCGCCTCCTGTTGGTCAGACAGCTTGGCAGGGTTGAGACTATATTTGCATaGTGTGGCCACTACACACAT +
Preference number: 4 (lower is better)
Translates to: RVLTLADRLLLVRQLGRVETIFA*CGHYTH
Trigger: ATGTGTGTAGTGGCCACATCATGCAAATATAGTCTC...AACCCTGCCAAGCTGTCTGACCAACAGGAGGCGGTCCGCCAGGGTCAGAACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR TCA 90 bp GGGGTTGGGGCTTGGGCCGCTCTGCAGGAAGTGTGGATGGATGCATCTCTGCTTACAGATTCTAAGTTGTaGACGCTGTGCAGTTCTGAG +
Preference number: 4 (lower is better)
Translates to: GVGAWAALQEVWMDASLLTDSKL*TLCSSE
Trigger: CTCAGAACTGCACAGCGTTCACAACTTAGAATCTGT...AAGCAGAGATGCATCCATCCACACTTCCTGCAGAGCGGCCCAAGCCCCAACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR GCA 90 bp ATTCTCTCCACACCCCGCTGTGAAATGAGTGCTGTTCTCTTCTGCCCTACATCCTGGTGGCAAAGGCGCTaGCCCACATACCTTGCAGGT +
Preference number: 4 (lower is better)
Translates to: ILSTPRCEMSAVLFCPTSWWQRR*PTYLAG
Trigger: ACCTGCAAGGTATGTGGGGCAGCGCCTTTGCCACCA...GGATGTAGGGCAGAAGAGAACAGCACTCATTTCACAGCGGGGTGTGGAGAGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR GCA 90 bp AAAGTCCTGGGGCTCATAGGTGAAGTTCATCATGCCATAGGGGGTGTCTGGCCTCAGAATGAGGTCCACTaGTCTCTGAGGCAGCAGAGC +
Preference number: 4 (lower is better)
Translates to: KVLGLIGEVHHAIGGVWPQNEVH*SLRQQS
Trigger: GCTCTGCTGCCTCAGAGAGCAGTGGACCTCATTCTG...AGGCCAGACACCCCCTATGGCATGATGAACTTCACCTATGAGCCCCAGGACTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR GCA 90 bp AGAGTCCCCATCGCTCCTCCCTCTACAAGCCCTGACCATGAGCAGTGTGTCTCCCCTGGAGCGATCTACTaGCCATCTTCTCCAAAAACA +
Preference number: 4 (lower is better)
Translates to: RVPIAPPSTSPDHEQCVSPGAIY*PSSPKT
Trigger: TGTTTTTGGAGAAGATGGGCAGTAGATCGCTCCAGG...GGAGACACACTGCTCATGGTCAGGGCTTGTAGAGGGAGGAGCGATGGGGACTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
CDS-3UTR GCA 90 bp CAGCCCCTCATTGTTCTTGATAGCAGTGCATCCAGGAGCTCGAGGTGGGGTTGGAGTGCTGTTCTCTTCTaGCCTACATCCCCAAGAGTC +
Preference number: 4 (lower is better)
Translates to: QPLIVLDSSASRSSRWGWSAVLF*PTSPRV
Trigger: GACTCTTGGGGATGTAGGGCAGAAGAGAACAGCACT...CCAACCCCACCTCGAGCTCCTGGATGCACTGCTATCAAGAACAATGAGGGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
CDS-3UTR GCA 90 bp ATGCATCTCTGCTTTCCATCTCAGTGTAAGGAGGACAGCTGGCTTCTCAGTGCCCAGCTGGCTTCTCAGTaGCCTCAGCCCCTGTTCTGT +
Preference number: 4 (lower is better)
Translates to: MHLCFPSQCKEDSWLLSAQLASQ*PQPLFC
Trigger: ACAGAACAGGGGCTGAGGGCACTGAGAAGCCAGCTG...GGCACTGAGAAGCCAGCTGTCCTCCTTACACTGAGATGGAAAGCAGAGATGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
CDS-3UTR GCA 90 bp CAGCACAATGGGGGAGCGGGGGTCCTCAGCCTTGGCAAACAGATAGCACTCACGGGATGGATGCATCTCTaGTTTCCATCTCAGTGTAAG +
Preference number: 4 (lower is better)
Translates to: QHNGGAGVLSLGKQIALTGWMHL*FPSQCK
Trigger: CTTACACTGAGATGGAAAGCAGAGATGCATCCATCC...CGTGAGTGCTATCTGTTTGCCAAGGCTGAGGACCCCCGCTCCCCCATTGTGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000562320.1
ENST00000569985.5
CDS-3UTR GCA 90 bp CAGATCCTGCACAGAGTCCCCATCGCTCCTCCCTCTACAAGCCCTGACCATGAGGGAAGTGTGGATGGATaGATCTCTGCTTTCCATCTC +
Preference number: 4 (lower is better)
Translates to: QILHRVPIAPPSTSPDHEGSVDG*ISAFHL
Trigger: GAGATGGAAAGCAGAGATGCATCCATCCACACTTCC...CTCATGGTCAGGGCTTGTAGAGGGAGGAGCGATGGGGACTCTGTGCAGGATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
CDS-3UTR GCA 90 bp GAAGTGAAGCGGGAGGTGAATATGTCCAGCACAGCCTGGGAGAAGGGCCCCTGTGGAAGTGTGGATGGATaGATCTCTGCTTTCCATCTC +
Preference number: 4 (lower is better)
Translates to: EVKREVNMSSTAWEKGPCGSVDG*ISAFHL
Trigger: GAGATGGAAAGCAGAGATGCATCCATCCACACTTCC...ACAGGGGCCCTTCTCCCAGGCTGTGCTGGACATATTCACCTCCCGCTTCACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR GCA 90 bp TATTTGCATGATGTGGCCACTACACACATCACCAGAGACTGTGGTCCAGGTTCGACAGACGCTGGCCTCTaGAACCCTGGGGCTGCTGAT +
Preference number: 4 (lower is better)
Translates to: YLHDVATTHITRDCGPGSTDAGL*NPGAAD
Trigger: ATCAGCAGCCCCAGGGTTGCAGAGGCCAGCGTCTGT...CGAACCTGGACCACAGTCTCTGGTGATGTGTGTAGTGGCCACATCATGCAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR CCA 90 bp CAGCCCCTCATTGTTCTTGATAGCAGTGCATCCAGGAGCTCGAGGTGGGGTTGGAGCTCTTGTGAATCCTaGTGGTTGAGTGGGAAGGTG +
Preference number: 4 (lower is better)
Translates to: QPLIVLDSSASRSSRWGWSSCES*WLSGKV
Trigger: CACCTTCCCACTCAACCACCAGGATTCACAAGAGCT...CCAACCCCACCTCGAGCTCCTGGATGCACTGCTATCAAGAACAATGAGGGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR CCA 90 bp ATCGCTCCTCCCTCTACAAGCCCTGACCATGAGCAGTGTGTCTCCTCTCTGTCACCTGGAGCTCAGCACTaGGTTCACGTGGAAGGTAAA +
Preference number: 4 (lower is better)
Translates to: IAPPSTSPDHEQCVSSLSPGAQH*VHVEGK
Trigger: TTTACCTTCCACGTGAACCCAGTGCTGAGCTCCAGG...TGACAGAGAGGAGACACACTGCTCATGGTCAGGGCTTGTAGAGGGAGGAGCGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR CCA 90 bp GGTTCTAGGTATTTGGAGAGTCCCTGGCGGGTCAGGGGAAATGGAGAAGAGGGAACTGTAGCCGCTCCGTaGACAAAGCTCCCATCTTAC +
Preference number: 4 (lower is better)
Translates to: GSRYLESPWRVRGNGEEGTVAAP*TKLPSY
Trigger: GTAAGATGGGAGCTTTGTCCACGGAGCGGCTACAGT...TCCCTCTTCTCCATTTCCCCTGACCCGCCAGGGACTCTCCAAATACCTAGAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR CCA 90 bp TCCCCTCAGCCCCTCATTGTTCTTGATAGCAGTGCATCCAGGAGCTCGAGGTGGGCAGGGTTCTCCTCCTaGTACAGGAGATACTCAACA +
Preference number: 4 (lower is better)
Translates to: SPQPLIVLDSSASRSSRWAGFSS*YRRYST
Trigger: TGTTGAGTATCTCCTGTACCAGGAGGAGAACCCTGC...CCACCTCGAGCTCCTGGATGCACTGCTATCAAGAACAATGAGGGGCTGAGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR CCA 90 bp TTCAAGGTCTCCACGTTGTTCAGGACGTTGTATCGACTGAGGGCCACCAGCCGATCGAAGAGTGAAGCCTaGGTAACTGGCAGGGAGACA +
Preference number: 4 (lower is better)
Translates to: FKVSTLFRTLYRLRATSRSKSEA*VTGRET
Trigger: TGTCTCCCTGCCAGTTACCCAGGCTTCACTCTTCGA...TCGGCTGGTGGCCCTCAGTCGATACAACGTCCTGAACAACGTGGAGACCTTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000562320.1
ENST00000569985.5
CDS-3UTR CCA 90 bp TATTTGCATGATGTGGCCACTACACACATCACCAGAGACTGTGGTCCAGGTTCGGCCAGCCCAAATAACTaGCTCCCCCAGCCCTCGCAA +
Preference number: 4 (lower is better)
Translates to: YLHDVATTHITRDCGPGSASPNN*LPQPSQ
Trigger: TTGCGAGGGCTGGGGGAGCCAGTTATTTGGGCTGGC...CGAACCTGGACCACAGTCTCTGGTGATGTGTGTAGTGGCCACATCATGCAAATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR CCA 90 bp TATTTGCATGATGTGGCCACTACACACATCACCAGAGACTGTGGTCCAGGTTCGCTTCACAAGCCTTGCTaGCCTGCGGGGACAGACGCT +
Preference number: 4 (lower is better)
Translates to: YLHDVATTHITRDCGPGSLHKPC*PAGTDA
Trigger: AGCGTCTGTCCCCGCAGGCCAGCAAGGCTTGTGAAG...CGAACCTGGACCACAGTCTCTGGTGATGTGTGTAGTGGCCACATCATGCAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR CCA 90 bp AGTGCTGTTCTCTTCTGCCCTACATCCCCAAGAGTCCCTGGAGCGATCTACTGCTCCTCCCTGTACTTCTaGCCAATATCTGGGCCACAG +
Preference number: 4 (lower is better)
Translates to: SAVLFCPTSPRVPGAIYCSSLYF*PISGPQ
Trigger: CTGTGGCCCAGATATTGGCCAGAAGTACAGGGAGGA...GCAGTAGATCGCTCCAGGGACTCTTGGGGATGTAGGGCAGAAGAGAACAGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR TCA 90 bp CTATATTTGCATGATGTGGCCACTACACACATCACCAGAGACTGTGGTCCAGGTGAGGGGTTGTGCAGCTaGGGCTTCTGGCAGTCGTCT +
Preference number: 4 (lower is better)
Translates to: LYLHDVATTHITRDCGPGEGLCS*GFWQSS
Trigger: AGACGACTGCCAGAAGCCTCAGCTGCACAACCCCTC...ACCTGGACCACAGTCTCTGGTGATGTGTGTAGTGGCCACATCATGCAAATATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
CDS-3UTR TCA 90 bp CTATATTTGCATGATGTGGCCACTACACACATCACCAGAGACTGTGGTCCAGGTAGGACTTGGGCCCTCTaGGGTCCTTCTGTGTCTGGG +
Preference number: 4 (lower is better)
Translates to: LYLHDVATTHITRDCGPGRTWAL*GPSVSG
Trigger: CCCAGACACAGAAGGACCTCAGAGGGCCCAAGTCCT...ACCTGGACCACAGTCTCTGGTGATGTGTGTAGTGGCCACATCATGCAAATATAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
CDS-3UTR TCA 90 bp GAGACACGCGCACATCTCCCACCTGGAGCAGCCAGAATGGGACATCACCCCACAGAGACTATATTTGCATaGTGTGGCCACTACACACAT +
Preference number: 4 (lower is better)
Translates to: ETRAHLPPGAARMGHHPTETIFA*CGHYTH
Trigger: ATGTGTGTAGTGGCCACATCATGCAAATATAGTCTC...TGTGGGGTGATGTCCCATTCTGGCTGCTCCAGGTGGGAGATGTGCGCGTGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
CDS-3UTR TCA 90 bp ACATCCCCAAGAGTCCCTGGAGCGATCTACTGCCCATCTTCTCCAAAAACACACTCCTCTTCACGAATCTaGGGGCTGCCCACACTAGAG +
Preference number: 4 (lower is better)
Translates to: TSPRVPGAIYCPSSPKTHSSSRI*GLPTLE
Trigger: CTCTAGTGTGGGCAGCCCTCAGATTCGTGAAGAGGA...GTGTGTTTTTGGAGAAGATGGGCAGTAGATCGCTCCAGGGACTCTTGGGGATGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR TCA 90 bp CATCCCCTCAGCCCCTCATTGTTCTTGATAGCAGTGCATCCAGGAGCTCGAGGTCTCCCAAACCTTATCTaGGCACAAGTGGCATTGCCT +
Preference number: 4 (lower is better)
Translates to: HPLSPSLFLIAVHPGARGLPNLI*AQVALP
Trigger: AGGCAATGCCACTTGTGCTCAGATAAGGTTTGGGAG...ACCTCGAGCTCCTGGATGCACTGCTATCAAGAACAATGAGGGGCTGAGGGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR TCA 90 bp GCAGCCACAGTTGCACATAGCAGTCGGCTTTGGACACTGCAGGTAGGACAGGGATCAAGCTCTCATTGCTaGAAAGGTTTCCTTGGGGAG +
Preference number: 4 (lower is better)
Translates to: AATVAHSSRLWTLQVGQGSSSHC*KGFLGE
Trigger: CTCCCCAAGGAAACCTTTTCAGCAATGAGAGCTTGA...TCCCTGTCCTACCTGCAGTGTCCAAAGCCGACTGCTATGTGCAACTGTGGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565553.1
CDS-3UTR GCA 90 bp TTGCTTTTATTCAGTGCAGGCACAATGCCAAAAGCCTGGAGCAAACACTGGAGGCCACCTTGGCCAGAGTaGCCAAAGCATGGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: LLLFSAGTMPKAWSKHWRPPWPE*PKHGWA
Trigger: TGCCCAGCCATGCTTTGGGCACTCTGGCCAAGGTGG...CCTCCAGTGTTTGCTCCAGGCTTTTGGCATTGTGCCTGCACTGAATAAAAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR GCA 90 bp GAAGTGCAGCACAATGGGGGAGCGGGGGTCCTCAGCCTTGGCAAACAGATAGCAAGAACAAATTCCACCTaGAGCTCTTGTGAATCCTGG +
Preference number: 4 (lower is better)
Translates to: EVQHNGGAGVLSLGKQIARTNST*SSCESW
Trigger: CCAGGATTCACAAGAGCTGCAGGTGGAATTTGTTCT...TGCTATCTGTTTGCCAAGGCTGAGGACCCCCGCTCCCCCATTGTGCTGCACTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR GCA 90 bp AGCAGATCCTGCACAGAGTCCCCATCGCTCCTCCCTCTACAAGCCCTGACCATGAGAACAAATTCCACCTaGAGCTCTTGTGAATCCTGG +
Preference number: 4 (lower is better)
Translates to: SRSCTESPSLLPLQALTMRTNST*SSCESW
Trigger: CCAGGATTCACAAGAGCTGCAGGTGGAATTTGTTCT...CATGGTCAGGGCTTGTAGAGGGAGGAGCGATGGGGACTCTGTGCAGGATCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR GCA 90 bp GACTGTGGTCCAGGTTCGAAGAGTGAAGCCTGGGTAACTGGCAGGGAGACACGCAGAACAAATTCCACCTaGAGCTCTTGTGAATCCTGG +
Preference number: 4 (lower is better)
Translates to: DCGPGSKSEAWVTGRETRRTNST*SSCESW
Trigger: CCAGGATTCACAAGAGCTGCAGGTGGAATTTGTTCT...GCGTGTCTCCCTGCCAGTTACCCAGGCTTCACTCTTCGAACCTGGACCACAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR GCA 90 bp ATGCATCTCTGCTTTCCATCTCAGTGTAAGGAGGACAGCTGGCTTCTCAGTGCCAAGGGAAGCAGATCCTaGACAGAGTCCCCATCGCTC +
Preference number: 4 (lower is better)
Translates to: MHLCFPSQCKEDSWLLSAKGSRS*TESPSL
Trigger: GAGCGATGGGGACTCTGTGCAGGATCTGCTTCCCTT...GGCACTGAGAAGCCAGCTGTCCTCCTTACACTGAGATGGAAAGCAGAGATGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
CDS-3UTR GCA 90 bp GCTGGCCATCCCCTCAGCCCCTCATTGTTCTTGATAGCAGTGCATCCAGGAGCTCCTGGAGCGATCTACTaGCCATCTTCTCCAAAAACA +
Preference number: 4 (lower is better)
Translates to: AGHPLSPSLFLIAVHPGAPGAIY*PSSPKT
Trigger: TGTTTTTGGAGAAGATGGGCAGTAGATCGCTCCAGG...AGCTCCTGGATGCACTGCTATCAAGAACAATGAGGGGCTGAGGGGATGGCCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
CDS-3UTR GCA 90 bp ATAGGGGGTGTCTGGCCTGTTGATGACAAAGTCCCCAAAGGCCTTCTCCTCAGCAGTGCTGTTCTCTTCTaGCCTACATCCCCAAGAGTC +
Preference number: 4 (lower is better)
Translates to: IGGVWPVDDKVPKGLLLSSAVLF*PTSPRV
Trigger: GACTCTTGGGGATGTAGGGCAGAAGAGAACAGCACT...GCTGAGGAGAAGGCCTTTGGGGACTTTGTCATCAACAGGCCAGACACCCCCTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000562320.1
ENST00000569985.5
CDS-3UTR GCA 90 bp AAAAGGGGCTTCCAAGGAATAGTCAAAGGACAGAATGAGGTCCACTGCTCTCTGTGGACAGCAGGTCTGTaGCCCGGATGTTTGTGGCCC +
Preference number: 4 (lower is better)
Translates to: KRGFQGIVKGQNEVHCSLWTAGL*PGCLWP
Trigger: GGGCCACAAACATCCGGGGCACAGACCTGCTGTCCA...CAGAGAGCAGTGGACCTCATTCTGTCCTTTGACTATTCCTTGGAAGCCCCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569985.5
CDS-3UTR GCA 90 bp GCTGTCTTTAGCTATTCTCCTCCAAAGCTATGCAGAGCCTTCCAACCTTTCAGAAGGCGAGGCTCCCTCTaGACTGCCCATGCCTTGGAG +
Preference number: 4 (lower is better)
Translates to: AVFSYSPPKLCRAFQPFRRRGSL*TAHALE
Trigger: CTCCAAGGCATGGGCAGTGCAGAGGGAGCCTCGCCT...TCTGAAAGGTTGGAAGGCTCTGCATAGCTTTGGAGGAGAATAGCTAAAGACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR GCA 90 bp TATTTGCATGATGTGGCCACTACACACATCACCAGAGACTGTGGTCCAGGTTCGACTGGAGGCATATGCTaGAGAGGCCGTGGCCAGATG +
Preference number: 4 (lower is better)
Translates to: YLHDVATTHITRDCGPGSTGGIC*RGRGQM
Trigger: CATCTGGCCACGGCCTCTGCAGCATATGCCTCCAGT...CGAACCTGGACCACAGTCTCTGGTGATGTGTGTAGTGGCCACATCATGCAAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR GCA 90 bp GATCTCCTCTTCACGAATCTGAGGGCTGCCCACACTAGAGAGGTTCTAGGTATTCAAGGTCTCAAGTGCTaGTGCAGGCTCCTAGGCAGC +
Preference number: 4 (lower is better)
Translates to: DLLFTNLRAAHTREVLGIQGLKC*CRLLGS
Trigger: GCTGCCTAGGAGCCTGCAGCAGCACTTGAGACCTTG...AATACCTAGAACCTCTCTAGTGTGGGCAGCCCTCAGATTCGTGAAGAGGAGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR GCA 90 bp CTATATTTGCATGATGTGGCCACTACACACATCACCAGAGACTGTGGTCCAGGTCCTCCCCTGGCTTCTTaGTCTGCGTGGCTCCCAGAT +
Preference number: 4 (lower is better)
Translates to: LYLHDVATTHITRDCGPGPPLAS*SAWLPD
Trigger: ATCTGGGAGCCACGCAGAGCAAGAAGCCAGGGGAGG...ACCTGGACCACAGTCTCTGGTGATGTGTGTAGTGGCCACATCATGCAAATATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR CCA 90 bp CTGGAGGGCGCACTTCAAGGTCTCCACGTTGTTCAGGACGTTGTATCGACTGAGATCCTGGTGGTTGAGTaGGAAGGTGTGTTTGTGAGG +
Preference number: 4 (lower is better)
Translates to: LEGALQGLHVVQDVVSTEILVVE*EGVFVR
Trigger: CCTCACAAACACACCTTCCCACTCAACCACCAGGAT...CTCAGTCGATACAACGTCCTGAACAACGTGGAGACCTTGAAGTGCGCCCTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR CCA 90 bp TCCCCTCAGCCCCTCATTGTTCTTGATAGCAGTGCATCCAGGAGCTCGAGGTGGTCTTGTGAATCCTGGTaGTTGAGTGGGAAGGTGTGT +
Preference number: 4 (lower is better)
Translates to: SPQPLIVLDSSASRSSRWSCESW*LSGKVC
Trigger: ACACACCTTCCCACTCAACCACCAGGATTCACAAGA...CCACCTCGAGCTCCTGGATGCACTGCTATCAAGAACAATGAGGGGCTGAGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR CCA 90 bp TGCCTACACTTCTGTGTGAGAAGGTCCCCGCCCACTCTGCACAAGCCCACGTTTTCAGATGCAGGCACCTaGCTCTTCTCCAGAACAAAT +
Preference number: 4 (lower is better)
Translates to: CLHFCVRRSPPTLHKPTFSDAGT*LFSRTN
Trigger: ATTTGTTCTGGAGAAGAGCCAGGTGCCTGCATCTGA...AAACGTGGGCTTGTGCAGAGTGGGCGGGGACCTTCTCACACAGAAGTGTAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR CCA 90 bp ATAGGGGGTGTCTGGCCTGTTGATGACAAAGTCCCCAAAGGCCTTCTCCTCAGCGCAGGGTTCTCCTCCTaGTACAGGAGATACTCAACA +
Preference number: 4 (lower is better)
Translates to: IGGVWPVDDKVPKGLLLSAGFSS*YRRYST
Trigger: TGTTGAGTATCTCCTGTACCAGGAGGAGAACCCTGC...GCTGAGGAGAAGGCCTTTGGGGACTTTGTCATCAACAGGCCAGACACCCCCTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR CCA 90 bp AGCAGTGTTGATGACAATGGCCACAGCAGGAGCCAGATAAACTCCCAGATAAACCAGATGGAGAGGGCCTaGCCAGAACGGGATCTCCTC +
Preference number: 4 (lower is better)
Translates to: SSVDDNGHSRSQINSQINQMERA*PERDLL
Trigger: GAGGAGATCCCGTTCTGGCCAGGCCCTCTCCATCTG...GTTTATCTGGGAGTTTATCTGGCTCCTGCTGTGGCCATTGTCATCAACACTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR CCA 90 bp CAAATAACTGGCTCCCCCAGCCCTCGCAACTCATGCCAGCTGGAGGGCTGCAGATTATCTGAGCACAAGTaGCATTGCCTACACTTCTGT +
Preference number: 4 (lower is better)
Translates to: QITGSPSPRNSCQLEGCRLSEHK*HCLHFC
Trigger: ACAGAAGTGTAGGCAATGCCACTTGTGCTCAGATAA...TCTGCAGCCCTCCAGCTGGCATGAGTTGCGAGGGCTGGGGGAGCCAGTTATTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR TCA 90 bp GAAGTTCATCATGCCATAGGGGGTGTCTGGCCTGTTGATGACAAAGTCCCCAAAGGGAAGGTGTGTTTGTaGGGTTGGCCACACTTGAGG +
Preference number: 4 (lower is better)
Translates to: EVHHAIGGVWPVDDKVPKGKVCL*GWPHLR
Trigger: CCTCAAGTGTGGCCAACCTCACAAACACACCTTCCC...TTTGGGGACTTTGTCATCAACAGGCCAGACACCCCCTATGGCATGATGAACTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR GCA 90 bp ATGCATCTCTGCTTTCCATCTCAGTGTAAGGAGGACAGCTGGCTTCTCAGTGCCTCATTTCCACCTTCATaGTCAGAGCCACCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: MHLCFPSQCKEDSWLLSASFPPS*SEPPPG
Trigger: GCCAGGAGGTGGCTCTGAGCATGAAGGTGGAAATGA...GGCACTGAGAAGCCAGCTGTCCTCCTTACACTGAGATGGAAAGCAGAGATGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR GCA 90 bp GATGGATGCATCTCTGCTTTCCATCTCAGTGTAAGGAGGACAGCTGGCTTCTCACTGTCCAGAAACTCCTaGTCCCCGTCAGAGAGGTCA +
Preference number: 4 (lower is better)
Translates to: DGCISAFHLSVRRTAGFSLSRNS*SPSERS
Trigger: TGACCTCTCTGACGGGGAGCAGGAGTTTCTGGACAG...TGAGAAGCCAGCTGTCCTCCTTACACTGAGATGGAAAGCAGAGATGCATCCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR GCA 90 bp GAAGTTCATCATGCCATAGGGGGTGTCTGGCCTGTTGATGACAAAGTCCCCAAAGGTTCAGGCTGGAGCTaGAGCAATCGTCCCATGAAG +
Preference number: 4 (lower is better)
Translates to: EVHHAIGGVWPVDDKVPKGSGWS*SNRPMK
Trigger: CTTCATGGGACGATTGCTGCAGCTCCAGCCTGAACC...TTTGGGGACTTTGTCATCAACAGGCCAGACACCCCCTATGGCATGATGAACTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR GCA 90 bp TATTTGCATGATGTGGCCACTACACACATCACCAGAGACTGTGGTCCAGGTTCGAGGCCACGAACTCCCTaGCAGCCACATAGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: YLHDVATTHITRDCGPGSRPRTP*QPHSPC
Trigger: ACAAGGACTATGTGGCTGGCAGGGAGTTCGTGGCCT...CGAACCTGGACCACAGTCTCTGGTGATGTGTGTAGTGGCCACATCATGCAAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
CDS-3UTR GCA 90 bp GATGGATGCATCTCTGCTTTCCATCTCAGTGTAAGGAGGACAGCTGGCTTCTCACAGAATGAGGTCCACTaGTCTCTGAGGCAGCAGAGC +
Preference number: 4 (lower is better)
Translates to: DGCISAFHLSVRRTAGFSQNEVH*SLRQQS
Trigger: GCTCTGCTGCCTCAGAGAGCAGTGGACCTCATTCTG...TGAGAAGCCAGCTGTCCTCCTTACACTGAGATGGAAAGCAGAGATGCATCCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR GCA 90 bp TATTTGCATGATGTGGCCACTACACACATCACCAGAGACTGTGGTCCAGGTTCGAAGGGAAGCAGATCCTaGACAGAGTCCCCATCGCTC +
Preference number: 4 (lower is better)
Translates to: YLHDVATTHITRDCGPGSKGSRS*TESPSL
Trigger: GAGCGATGGGGACTCTGTGCAGGATCTGCTTCCCTT...CGAACCTGGACCACAGTCTCTGGTGATGTGTGTAGTGGCCACATCATGCAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
CDS-3UTR GCA 90 bp ATCGCTCCTCCCTCTACAAGCCCTGACCATGAGCAGTGTGTCTCCTCTCTGTCAGGAAGTGTGGATGGATaGATCTCTGCTTTCCATCTC +
Preference number: 4 (lower is better)
Translates to: IAPPSTSPDHEQCVSSLSGSVDG*ISAFHL
Trigger: GAGATGGAAAGCAGAGATGCATCCATCCACACTTCC...TGACAGAGAGGAGACACACTGCTCATGGTCAGGGCTTGTAGAGGGAGGAGCGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
CDS-3UTR GCA 90 bp ATCGCTCCTCCCTCTACAAGCCCTGACCATGAGCAGTGTGTCTCCTCTCTGTCAGAGCACAAGTGGCATTaGCTACACTTCTGTGTGAGA +
Preference number: 4 (lower is better)
Translates to: IAPPSTSPDHEQCVSSLSEHKWH*LHFCVR
Trigger: TCTCACACAGAAGTGTAGGCAATGCCACTTGTGCTC...TGACAGAGAGGAGACACACTGCTCATGGTCAGGGCTTGTAGAGGGAGGAGCGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR CCA 90 bp CTATATTTGCATGATGTGGCCACTACACACATCACCAGAGACTGTGGTCCAGGTGTCTGCCAGCCACCTTaGCCAGAGTGCCCAAAGCAT +
Preference number: 4 (lower is better)
Translates to: LYLHDVATTHITRDCGPGVCQPP*PECPKH
Trigger: ATGCTTTGGGCACTCTGGCCAAGGTGGCTGGCAGAC...ACCTGGACCACAGTCTCTGGTGATGTGTGTAGTGGCCACATCATGCAAATATAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR CCA 90 bp CTCTTCTGCCCTACATCCCCAAGAGTCCCTGGAGCGATCTACTGCCCATCTTCTTCTTGTGAATCCTGGTaGTTGAGTGGGAAGGTGTGT +
Preference number: 4 (lower is better)
Translates to: LFCPTSPRVPGAIYCPSSSCESW*LSGKVC
Trigger: ACACACCTTCCCACTCAACCACCAGGATTCACAAGA...AGAAGATGGGCAGTAGATCGCTCCAGGGACTCTTGGGGATGTAGGGCAGAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR CCA 90 bp ATTCTCTCCACACCCCGCTGTGAAATGAGTGCTGTTCTCTTCTGCCCTACATCCGCCATAGGGGGTGTCTaGCCTGTTGATGACAAAGTC +
Preference number: 4 (lower is better)
Translates to: ILSTPRCEMSAVLFCPTSAIGGV*PVDDKV
Trigger: GACTTTGTCATCAACAGGCCAGACACCCCCTATGGC...GGATGTAGGGCAGAAGAGAACAGCACTCATTTCACAGCGGGGTGTGGAGAGAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
CDS-3UTR CCA 90 bp AATGGCCACAGCAGGAGCCAGATAAACTCCCAGATAAACCTCTCACTGCTGAACATCCCCAAGAGTCCCTaGAGCGATCTACTGCCCATC +
Preference number: 4 (lower is better)
Translates to: NGHSRSQINSQINLSLLNIPKSP*SDLLPI
Trigger: GATGGGCAGTAGATCGCTCCAGGGACTCTTGGGGAT...GTTCAGCAGTGAGAGGTTTATCTGGGAGTTTATCTGGCTCCTGCTGTGGCCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR CCA 90 bp ACATCCCCAAGAGTCCCTGGAGCGATCTACTGCCCATCTTCTCCAAAAACACACTCGAAGAGTGAAGCCTaGGTAACTGGCAGGGAGACA +
Preference number: 4 (lower is better)
Translates to: TSPRVPGAIYCPSSPKTHSKSEA*VTGRET
Trigger: TGTCTCCCTGCCAGTTACCCAGGCTTCACTCTTCGA...GTGTGTTTTTGGAGAAGATGGGCAGTAGATCGCTCCAGGGACTCTTGGGGATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
CDS-3UTR CCA 90 bp AATGGCCACAGCAGGAGCCAGATAAACTCCCAGATAAACCTCTCACTGCTGAACCTGGAGGTCATAGTATaGGTAGGTTTCCCGCCGCCA +
Preference number: 4 (lower is better)
Translates to: NGHSRSQINSQINLSLLNLEVIV*VGFPPP
Trigger: TGGCGGCGGGAAACCTACCCATACTATGACCTCCAG...GTTCAGCAGTGAGAGGTTTATCTGGGAGTTTATCTGGCTCCTGCTGTGGCCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR CCA 90 bp AGCAGTGTTGATGACAATGGCCACAGCAGGAGCCAGATAAACTCCCAGATAAACCATAGCAGTCGGCTTTaGACAGCAGGTCTGTGCCCC +
Preference number: 4 (lower is better)
Translates to: SSVDDNGHSRSQINSQINHSSRL*TAGLCP
Trigger: GGGGCACAGACCTGCTGTCCAAAGCCGACTGCTATG...GTTTATCTGGGAGTTTATCTGGCTCCTGCTGTGGCCATTGTCATCAACACTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR CCA 90 bp TCCCCAACCTGGAAACCAGAACTAGTCTTCTTTCCAGACTCAGGACAGGTAAGGGCGGGTCAGGGGAAATaGAGAAGAGGGAGAGTGAGA +
Preference number: 4 (lower is better)
Translates to: SPTWKPELVFFPDSGQVRAGQGK*RRGRVR
Trigger: TCTCACTCTCCCTCTTCTCCATTTCCCCTGACCCGC...CCTTACCTGTCCTGAGTCTGGAAAGAAGACTAGTTCTGGTTTCCAGGTTGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR TCA 90 bp CTATATTTGCATGATGTGGCCACTACACACATCACCAGAGACTGTGGTCCAGGTCAACCTCATAGGGCGTaGACTCGCACCACTCTGCAA +
Preference number: 4 (lower is better)
Translates to: LYLHDVATTHITRDCGPGQPHRA*TRTTLQ
Trigger: TTGCAGAGTGGTGCGAGTTCACGCCCTATGAGGTTG...ACCTGGACCACAGTCTCTGGTGATGTGTGTAGTGGCCACATCATGCAAATATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR TCA 90 bp CAGCCCCTCATTGTTCTTGATAGCAGTGCATCCAGGAGCTCGAGGTGGGGTTGGCTGAGGATACAGCAGTaGACAAAACAGATGGTAGAA +
Preference number: 4 (lower is better)
Translates to: QPLIVLDSSASRSSRWGWLRIQQ*TKQMVE
Trigger: TTCTACCATCTGTTTTGTTCACTGCTGTATCCTCAG...CCAACCCCACCTCGAGCTCCTGGATGCACTGCTATCAAGAACAATGAGGGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR TCA 90 bp ATCGCTCCTCCCTCTACAAGCCCTGACCATGAGCAGTGTGTCTCCTCTCTGTCAGATAAGGGTTGGGAATaGGGTAAAGACTCAGATCTC +
Preference number: 4 (lower is better)
Translates to: IAPPSTSPDHEQCVSSLSDKGWE*GKDSDL
Trigger: GAGATCTGAGTCTTTACCTCATTCCCAACCCTTATC...TGACAGAGAGGAGACACACTGCTCATGGTCAGGGCTTGTAGAGGGAGGAGCGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR GCA 90 bp AGCAGTGTTGATGACAATGGCCACAGCAGGAGCCAGATAAACTCCCAGATAAACGAGAGAGCTGGTCGCTaGCCAGGATGTCCTTGTCAT +
Preference number: 4 (lower is better)
Translates to: SSVDDNGHSRSQINSQINERAGR*PGCPCH
Trigger: ATGACAAGGACATCCTGGGCAGCGACCAGCTCTCTC...GTTTATCTGGGAGTTTATCTGGCTCCTGCTGTGGCCATTGTCATCAACACTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR GCA 90 bp AATGGCCACAGCAGGAGCCAGATAAACTCCCAGATAAACCTCTCACTGCTGAACAAGCTCCCATCTTACTaGTGCAGACGTGAACCTGGG +
Preference number: 4 (lower is better)
Translates to: NGHSRSQINSQINLSLLNKLPSY*CRREPG
Trigger: CCCAGGTTCACGTCTGCAGCAGTAAGATGGGAGCTT...GTTCAGCAGTGAGAGGTTTATCTGGGAGTTTATCTGGCTCCTGCTGTGGCCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR GCA 90 bp GATGGATGCATCTCTGCTTTCCATCTCAGTGTAAGGAGGACAGCTGGCTTCTCATCCAAGCTGCAATTCTaGAAGAGCTTTCCGGGGCCT +
Preference number: 4 (lower is better)
Translates to: DGCISAFHLSVRRTAGFSSKLQF*KSFPGP
Trigger: AGGCCCCGGAAAGCTCTTGCAGAATTGCAGCTTGGA...TGAGAAGCCAGCTGTCCTCCTTACACTGAGATGGAAAGCAGAGATGCATCCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
CDS-3UTR GCA 90 bp TCTCTTCTGCCCTACATCCCCAAGAGTCCCTGGAGCGATCTACTGCCCATCTTCGGATGGATGCATCTCTaGTTTCCATCTCAGTGTAAG +
Preference number: 4 (lower is better)
Translates to: SLLPYIPKSPWSDLLPIFGWMHL*FPSQCK
Trigger: CTTACACTGAGATGGAAAGCAGAGATGCATCCATCC...GAAGATGGGCAGTAGATCGCTCCAGGGACTCTTGGGGATGTAGGGCAGAAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
CDS-3UTR GCA 90 bp GGTTCTAGGTATTTGGAGAGTCCCTGGCGGGTCAGGGGAAATGGAGAAGAGGGAGGATGGATGCATCTCTaGTTTCCATCTCAGTGTAAG +
Preference number: 4 (lower is better)
Translates to: GSRYLESPWRVRGNGEEGGWMHL*FPSQCK
Trigger: CTTACACTGAGATGGAAAGCAGAGATGCATCCATCC...TCCCTCTTCTCCATTTCCCCTGACCCGCCAGGGACTCTCCAAATACCTAGAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR GCA 90 bp GCTGTCTTTAGCTATTCTCCTCCAAAGCTATGCAGAGCCTTCCAACCTTTCAGACTGCGCTCCTCTGGTTaGACAAACTGCTGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: AVFSYSPPKLCRAFQPFRLRSSG*TNCWLR
Trigger: CCTGAGCCAGCAGTTTGTGCAACCAGAGGAGCGCAG...TCTGAAAGGTTGGAAGGCTCTGCATAGCTTTGGAGGAGAATAGCTAAAGACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR CCA 90 bp ACATCCCCAAGAGTCCCTGGAGCGATCTACTGCCCATCTTCTCCAAAAACACACAGCTCTTGTGAATCCTaGTGGTTGAGTGGGAAGGTG +
Preference number: 4 (lower is better)
Translates to: TSPRVPGAIYCPSSPKTHSSCES*WLSGKV
Trigger: CACCTTCCCACTCAACCACCAGGATTCACAAGAGCT...GTGTGTTTTTGGAGAAGATGGGCAGTAGATCGCTCCAGGGACTCTTGGGGATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR CCA 90 bp GATGGATGCATCTCTGCTTTCCATCTCAGTGTAAGGAGGACAGCTGGCTTCTCAGTGAAGTTAAAGCTCTaGGCGGAAGTGAAGCGGGAG +
Preference number: 4 (lower is better)
Translates to: DGCISAFHLSVRRTAGFSVKLKL*AEVKRE
Trigger: CTCCCGCTTCACTTCCGCCCAGAGCTTTAACTTCAC...TGAGAAGCCAGCTGTCCTCCTTACACTGAGATGGAAAGCAGAGATGCATCCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
CDS-3UTR CCA 90 bp ACATCCCCAAGAGTCCCTGGAGCGATCTACTGCCCATCTTCTCCAAAAACACACCTTGCCAAGACCCATTaGATGCATCTGGGAAAGAGG +
Preference number: 4 (lower is better)
Translates to: TSPRVPGAIYCPSSPKTHLAKTH*MHLGKR
Trigger: CCTCTTTCCCAGATGCATCCAATGGGTCTTGGCAAG...GTGTGTTTTTGGAGAAGATGGGCAGTAGATCGCTCCAGGGACTCTTGGGGATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR CCA 90 bp GATCTCCTCTTCACGAATCTGAGGGCTGCCCACACTAGAGAGGTTCTAGGTATTGAGGTTCTAGGTATTTaGAGAGTCCCTGGCGGGTCA +
Preference number: 4 (lower is better)
Translates to: DLLFTNLRAAHTREVLGIEVLGI*RVPGGS
Trigger: TGACCCGCCAGGGACTCTCCAAATACCTAGAACCTC...AATACCTAGAACCTCTCTAGTGTGGGCAGCCCTCAGATTCGTGAAGAGGAGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR CCA 90 bp GATGGATGCATCTCTGCTTTCCATCTCAGTGTAAGGAGGACAGCTGGCTTCTCAGCTTCTTGCTCTGCGTaGCTCCCAGATTCAGTCTTG +
Preference number: 4 (lower is better)
Translates to: DGCISAFHLSVRRTAGFSASCSA*LPDSVL
Trigger: CAAGACTGAATCTGGGAGCCACGCAGAGCAAGAAGC...TGAGAAGCCAGCTGTCCTCCTTACACTGAGATGGAAAGCAGAGATGCATCCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR CCA 90 bp TATTTGCATGATGTGGCCACTACACACATCACCAGAGACTGTGGTCCAGGTTCGGAGCAGACATTAAACTaGCTGGGTTACCTTCGGCCC +
Preference number: 4 (lower is better)
Translates to: YLHDVATTHITRDCGPGSEQTLN*LGYLRP
Trigger: GGGCCGAAGGTAACCCAGCCAGTTTAATGTCTGCTC...CGAACCTGGACCACAGTCTCTGGTGATGTGTGTAGTGGCCACATCATGCAAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR TCA 90 bp GATGGATGCATCTCTGCTTTCCATCTCAGTGTAAGGAGGACAGCTGGCTTCTCAAGTCAAAGGACAGAATaGGGTCCACTGCTCTCTGAG +
Preference number: 4 (lower is better)
Translates to: DGCISAFHLSVRRTAGFSSQRTE*GPLLSE
Trigger: CTCAGAGAGCAGTGGACCTCATTCTGTCCTTTGACT...TGAGAAGCCAGCTGTCCTCCTTACACTGAGATGGAAAGCAGAGATGCATCCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR GCA 90 bp ACATCCCCAAGAGTCCCTGGAGCGATCTACTGCCCATCTTCTCCAAAAACACACCCTGGAGCGATCTACTaGCCATCTTCTCCAAAAACA +
Preference number: 4 (lower is better)
Translates to: TSPRVPGAIYCPSSPKTHPGAIY*PSSPKT
Trigger: TGTTTTTGGAGAAGATGGGCAGTAGATCGCTCCAGG...GTGTGTTTTTGGAGAAGATGGGCAGTAGATCGCTCCAGGGACTCTTGGGGATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
CDS-3UTR GCA 90 bp ATGCATCTCTGCTTTCCATCTCAGTGTAAGGAGGACAGCTGGCTTCTCAGTGCCGGAAGTGTGGATGGATaGATCTCTGCTTTCCATCTC +
Preference number: 4 (lower is better)
Translates to: MHLCFPSQCKEDSWLLSAGSVDG*ISAFHL
Trigger: GAGATGGAAAGCAGAGATGCATCCATCCACACTTCC...GGCACTGAGAAGCCAGCTGTCCTCCTTACACTGAGATGGAAAGCAGAGATGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
CDS-3UTR GCA 90 bp AGCAGTGTTGATGACAATGGCCACAGCAGGAGCCAGATAAACTCCCAGATAAACCTCGTACCTACTCCTTaGCCTCTGCCTCAGGGTTAT +
Preference number: 4 (lower is better)
Translates to: SSVDDNGHSRSQINSQINLVPTP*PLPQGY
Trigger: ATAACCCTGAGGCAGAGGGCAAGGAGTAGGTACGAG...GTTTATCTGGGAGTTTATCTGGCTCCTGCTGTGGCCATTGTCATCAACACTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR GCA 90 bp CTGTCTTTAGCTATTCTCCTCCAAAGCTATGCAGAGCCTTCCAACCTTTCAGAAGAGCAGCTAGGGGACTaGCCAGCTCAAGTGGCCAAA +
Preference number: 4 (lower is better)
Translates to: LSLAILLQSYAEPSNLSEEQLGD*PAQVAK
Trigger: TTTGGCCACTTGAGCTGGGCAGTCCCCTAGCTGCTC...TTCTGAAAGGTTGGAAGGCTCTGCATAGCTTTGGAGGAGAATAGCTAAAGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR CCA 90 bp ATTCTCTCCACACCCCGCTGTGAAATGAGTGCTGTTCTCTTCTGCCCTACATCCTCAGATGCAGGCACCTaGCTCTTCTCCAGAACAAAT +
Preference number: 4 (lower is better)
Translates to: ILSTPRCEMSAVLFCPTSSDAGT*LFSRTN
Trigger: ATTTGTTCTGGAGAAGAGCCAGGTGCCTGCATCTGA...GGATGTAGGGCAGAAGAGAACAGCACTCATTTCACAGCGGGGTGTGGAGAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR CCA 90 bp CTATATTTGCATGATGTGGCCACTACACACATCACCAGAGACTGTGGTCCAGGTACTGTAGCCGCTCCGTaGACAAAGCTCCCATCTTAC +
Preference number: 4 (lower is better)
Translates to: LYLHDVATTHITRDCGPGTVAAP*TKLPSY
Trigger: GTAAGATGGGAGCTTTGTCCACGGAGCGGCTACAGT...ACCTGGACCACAGTCTCTGGTGATGTGTGTAGTGGCCACATCATGCAAATATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR CCA 90 bp ACAGAGTCCCCATCGCTCCTCCCTCTACAAGCCCTGACCATGAGCAGTGTGTCTTATATTTGCATGATGTaGCCACTACACACATCACCA +
Preference number: 4 (lower is better)
Translates to: TESPSLLPLQALTMSSVSYICMM*PLHTSP
Trigger: TGGTGATGTGTGTAGTGGCCACATCATGCAAATATA...AGACACACTGCTCATGGTCAGGGCTTGTAGAGGGAGGAGCGATGGGGACTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
CDS-3UTR CCA 90 bp TTGCCTACACTTCTGTGTGAGAAGGTCCCCGCCCACTCTGCACAAGCCCACGTTTATATTTGCATGATGTaGCCACTACACACATCACCA +
Preference number: 4 (lower is better)
Translates to: LPTLLCEKVPAHSAQAHVYICMM*PLHTSP
Trigger: TGGTGATGTGTGTAGTGGCCACATCATGCAAATATA...AACGTGGGCTTGTGCAGAGTGGGCGGGGACCTTCTCACACAGAAGTGTAGGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR CCA 90 bp TCTCTTCTGCCCTACATCCCCAAGAGTCCCTGGAGCGATCTACTGCCCATCTTCTTGGGAGAGGGTCTGTaGTTTATATCAGCTCTTCAA +
Preference number: 4 (lower is better)
Translates to: SLLPYIPKSPWSDLLPIFLGEGL*FISALQ
Trigger: TTGAAGAGCTGATATAAACCACAGACCCTCTCCCAA...GAAGATGGGCAGTAGATCGCTCCAGGGACTCTTGGGGATGTAGGGCAGAAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397272.7
3UTR CAA 72 bp GGGGAAATGGAGAAGAGGGAGAGTGAGAAACAAAACTaGCCAAGACCCATTGGATGCATCTGGGAAAGAGGC +
Preference number: 4 (lower is better)
Translates to: GEMEKRESEKQN*PRPIGCIWERG
Trigger: GCCTCTTTCCCAGATGCATCCAATGGGTCTTGGCAAGTTTTGTTTCTCACTCTCCCTCTTCTCCATTTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR TCA 90 bp CTGTCTTTAGCTATTCTCCTCCAAAGCTATGCAGAGCCTTCCAACCTTTCAGAAGGGAAGGTGTGTTTGTaGGGTTGGCCACACTTGAGG +
Preference number: 4 (lower is better)
Translates to: LSLAILLQSYAEPSNLSEGKVCL*GWPHLR
Trigger: CCTCAAGTGTGGCCAACCTCACAAACACACCTTCCC...TTCTGAAAGGTTGGAAGGCTCTGCATAGCTTTGGAGGAGAATAGCTAAAGACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR TCA 90 bp TTGCTTTTATTCAGTGCAGGCACAATGCCAAAAGCCTGGAGCAAACACTGGAGGGTGAATCCTGGTGGTTaGGTGGGAAGGTGTGTTTGT +
Preference number: 4 (lower is better)
Translates to: LLLFSAGTMPKAWSKHWRVNPGG*VGRCVC
Trigger: ACAAACACACCTTCCCACTCAACCACCAGGATTCAC...CCTCCAGTGTTTGCTCCAGGCTTTTGGCATTGTGCCTGCACTGAATAAAAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR TCA 90 bp CTATATTTGCATGATGTGGCCACTACACACATCACCAGAGACTGTGGTCCAGGTAACGCTGTGCAGTTCTaGGCTGTGAACCCTATGAAG +
Preference number: 4 (lower is better)
Translates to: LYLHDVATTHITRDCGPGNAVQF*AVNPMK
Trigger: CTTCATAGGGTTCACAGCTCAGAACTGCACAGCGTT...ACCTGGACCACAGTCTCTGGTGATGTGTGTAGTGGCCACATCATGCAAATATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR TCA 90 bp AATGGCCACAGCAGGAGCCAGATAAACTCCCAGATAAACCTCTCACTGCTGAACGACTCAGATCTCTCCTaGGGAGCAGACATTAAACTG +
Preference number: 4 (lower is better)
Translates to: NGHSRSQINSQINLSLLNDSDLS*GADIKL
Trigger: CAGTTTAATGTCTGCTCCTCAGGAGAGATCTGAGTC...GTTCAGCAGTGAGAGGTTTATCTGGGAGTTTATCTGGCTCCTGCTGTGGCCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR GCA 90 bp GCTGTCTTTAGCTATTCTCCTCCAAAGCTATGCAGAGCCTTCCAACCTTTCAGATCATTTCCACCTTCATaGTCAGAGCCACCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: AVFSYSPPKLCRAFQPFRSFPPS*SEPPPG
Trigger: GCCAGGAGGTGGCTCTGAGCATGAAGGTGGAAATGA...TCTGAAAGGTTGGAAGGCTCTGCATAGCTTTGGAGGAGAATAGCTAAAGACAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR GCA 90 bp CTGGAGGTAATTAACATTTATTGTTCCCCTTTCAGGGAAGGTCATGGGCGTAGAGGTTCAGGCTGGAGCTaGAGCAATCGTCCCATGAAG +
Preference number: 4 (lower is better)
Translates to: LEVINIYCSPFREGHGRRGSGWS*SNRPMK
Trigger: CTTCATGGGACGATTGCTGCAGCTCCAGCCTGAACC...TCTACGCCCATGACCTTCCCTGAAAGGGGAACAATAAATGTTAATTACCTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR GCA 90 bp TTGCTTTTATTCAGTGCAGGCACAATGCCAAAAGCCTGGAGCAAACACTGGAGGCCAAGACCCATTGGATaGATCTGGGAAAGAGGCAAG +
Preference number: 4 (lower is better)
Translates to: LLLFSAGTMPKAWSKHWRPRPIG*IWERGK
Trigger: CTTGCCTCTTTCCCAGATGCATCCAATGGGTCTTGG...CCTCCAGTGTTTGCTCCAGGCTTTTGGCATTGTGCCTGCACTGAATAAAAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR GCA 90 bp TCCCCAACCTGGAAACCAGAACTAGTCTTCTTTCCAGACTCAGGACAGGTAAGGGAAGCTGGAGCTGCTTaGTTTTATTCAGTGCAGGCA +
Preference number: 4 (lower is better)
Translates to: SPTWKPELVFFPDSGQVREAGAA*FYSVQA
Trigger: TGCCTGCACTGAATAAAAGCAAGCAGCTCCAGCTTC...CCTTACCTGTCCTGAGTCTGGAAAGAAGACTAGTTCTGGTTTCCAGGTTGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR CCA 90 bp TTCAAGGTCTCCACGTTGTTCAGGACGTTGTATCGACTGAGGGCCACCAGCCGATATATTTGCATGATGTaGCCACTACACACATCACCA +
Preference number: 4 (lower is better)
Translates to: FKVSTLFRTLYRLRATSRYICMM*PLHTSP
Trigger: TGGTGATGTGTGTAGTGGCCACATCATGCAAATATA...TCGGCTGGTGGCCCTCAGTCGATACAACGTCCTGAACAACGTGGAGACCTTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000562320.1
ENST00000569985.5
CDS-3UTR CCA 90 bp CATCCCCTCAGCCCCTCATTGTTCTTGATAGCAGTGCATCCAGGAGCTCGAGGTTATATTTGCATGATGTaGCCACTACACACATCACCA +
Preference number: 4 (lower is better)
Translates to: HPLSPSLFLIAVHPGARGYICMM*PLHTSP
Trigger: TGGTGATGTGTGTAGTGGCCACATCATGCAAATATA...ACCTCGAGCTCCTGGATGCACTGCTATCAAGAACAATGAGGGGCTGAGGGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
CDS-3UTR CCA 90 bp CTGGAGGTAATTAACATTTATTGTTCCCCTTTCAGGGAAGGTCATGGGCGTAGAGGTTGCACAAACTGCTaGCTCAGGTGTGACAGGCAG +
Preference number: 4 (lower is better)
Translates to: LEVINIYCSPFREGHGRRGCTNC*LRCDRQ
Trigger: CTGCCTGTCACACCTGAGCCAGCAGTTTGTGCAACC...TCTACGCCCATGACCTTCCCTGAAAGGGGAACAATAAATGTTAATTACCTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR TCA 90 bp ACATCCCCAAGAGTCCCTGGAGCGATCTACTGCCCATCTTCTCCAAAAACACACGAGACTATATTTGCATaGTGTGGCCACTACACACAT +
Preference number: 4 (lower is better)
Translates to: TSPRVPGAIYCPSSPKTHETIFA*CGHYTH
Trigger: ATGTGTGTAGTGGCCACATCATGCAAATATAGTCTC...GTGTGTTTTTGGAGAAGATGGGCAGTAGATCGCTCCAGGGACTCTTGGGGATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
CDS-3UTR TCA 90 bp AGCAGTGTTGATGACAATGGCCACAGCAGGAGCCAGATAAACTCCCAGATAAACGGCTCTAATGGGCACTaGAGAAACACCACAGATTCT +
Preference number: 4 (lower is better)
Translates to: SSVDDNGHSRSQINSQINGSNGH*RNTTDS
Trigger: AGAATCTGTGGTGTTTCTTCAGTGCCCATTAGAGCC...GTTTATCTGGGAGTTTATCTGGCTCCTGCTGTGGCCATTGTCATCAACACTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR TCA 90 bp GCTGTCTTTAGCTATTCTCCTCCAAAGCTATGCAGAGCCTTCCAACCTTTCAGATGCTGCTCTAGGCACTaGGGATACAGCAGTGAACAA +
Preference number: 4 (lower is better)
Translates to: AVFSYSPPKLCRAFQPFRCCSRH*GYSSEQ
Trigger: TTGTTCACTGCTGTATCCTCAGTGCCTAGAGCAGCA...TCTGAAAGGTTGGAAGGCTCTGCATAGCTTTGGAGGAGAATAGCTAAAGACAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR CCA 90 bp GCTGTCTTTAGCTATTCTCCTCCAAAGCTATGCAGAGCCTTCCAACCTTTCAGACACCCTTCCCCAACCTaGAAACCAGAACTAGTCTTC +
Preference number: 4 (lower is better)
Translates to: AVFSYSPPKLCRAFQPFRHPSPT*KPELVF
Trigger: GAAGACTAGTTCTGGTTTCCAGGTTGGGGAAGGGTG...TCTGAAAGGTTGGAAGGCTCTGCATAGCTTTGGAGGAGAATAGCTAAAGACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR GCA 90 bp AATGGCCACAGCAGGAGCCAGATAAACTCCCAGATAAACCTCTCACTGCTGAACGTGAGAAACAAAACTTaGCAAGACCCATTGGATGCA +
Preference number: 4 (lower is better)
Translates to: NGHSRSQINSQINLSLLNVRNKT*QDPLDA
Trigger: TGCATCCAATGGGTCTTGGCAAGTTTTGTTTCTCAC...GTTCAGCAGTGAGAGGTTTATCTGGGAGTTTATCTGGCTCCTGCTGTGGCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR GCA 90 bp GCTGTCTTTAGCTATTCTCCTCCAAAGCTATGCAGAGCCTTCCAACCTTTCAGAACCTTTCAGAAGGCCTaGTCCTTTCCCTATAGCTTC +
Preference number: 4 (lower is better)
Translates to: AVFSYSPPKLCRAFQPFRTFQKA*SFPYSF
Trigger: GAAGCTATAGGGAAAGGAGCAGGCCTTCTGAAAGGT...TCTGAAAGGTTGGAAGGCTCTGCATAGCTTTGGAGGAGAATAGCTAAAGACAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR GCA 90 bp TTGCTTTTATTCAGTGCAGGCACAATGCCAAAAGCCTGGAGCAAACACTGGAGGCTTGCTTTTATTCAGTaGAGGCACAATGCCAAAAGC +
Preference number: 4 (lower is better)
Translates to: LLLFSAGTMPKAWSKHWRLAFIQ*RHNAKS
Trigger: GCTTTTGGCATTGTGCCTGCACTGAATAAAAGCAAG...CCTCCAGTGTTTGCTCCAGGCTTTTGGCATTGTGCCTGCACTGAATAAAAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000397272.7
3UTR CAA 72 bp AGCTGTGAACCCTATGAAGGTTTTACTAACAAGTTATaGATGACGGCAGGCACAGCAGTGTTGATGACAATG +
Preference number: 4 (lower is better)
Translates to: SCEPYEGFTNKL*MTAGTAVLMTM
Trigger: CATTGTCATCAACACTGCTGTGCCTGCCGTCATCAATAACTTGTTAGTAAAACCTTCATAGGGTTCACAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS GCA 90 bp GTGCCCAAAGCATGGCTGGGCAGCCCGGGCCCCAGCAGGGAACCCTaGCTGCGCTCCTCTGGTTGCACAAACTGCTGGCTCAGGTGTGAC +
Preference number: 5 (lower is better)
Translates to: VPKAWLGSPGPSREP*LRSSGCTNCWLRCD
Trigger: GTCACACCTGAGCCAGCAGTTTGTGCAACCAGAGGAGCGCAGGCAGGGTTCCCTGCTGGGGCCCGGGCTGCCCAGCCATGCTTTGGGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397272.7
ENST00000565553.1
CDS-3UTR CAA 90 bp GCTGGCTTCTCAGTGCCCTCAGCCCCTGTTCTGTGTGGGTCTGAGGACTTGGGCGAGCTCGAGGTGGGGTaGGGGCTTGGGCCGCTCTGC +
Preference number: 5 (lower is better)
Translates to: AGFSVPSAPVLCGSEDLGELEVG*GLGPLC
Trigger: GCAGAGCGGCCCAAGCCCCAACCCCACCTCGAGCTC...GCCCAAGTCCTCAGACCCACACAGAACAGGGGCTGAGGGCACTGAGAAGCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
CDS-3UTR CAA 90 bp TGGTGCCGGTCCAGAGCCAGCTGGAGGGCGCACTTCAAGGTCTCCACGTTGTTCGAGCTCGAGGTGGGGTaGGGGCTTGGGCCGCTCTGC +
Preference number: 5 (lower is better)
Translates to: WCRSRASWRAHFKVSTLFELEVG*GLGPLC
Trigger: GCAGAGCGGCCCAAGCCCCAACCCCACCTCGAGCTC...GAACAACGTGGAGACCTTGAAGTGCGCCCTCCAGCTGGCTCTGGACCGGCACCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000562320.1
ENST00000569985.5
CDS-3UTR CAA 90 bp CTCCCACCTGGAGCAGCCAGAATGGGACATCACCCCACAGGCTTTAGGGCGCTGGAGCTCGAGGTGGGGTaGGGGCTTGGGCCGCTCTGC +
Preference number: 5 (lower is better)
Translates to: LPPGAARMGHHPTGFRALELEVG*GLGPLC
Trigger: GCAGAGCGGCCCAAGCCCCAACCCCACCTCGAGCTC...CAGCGCCCTAAAGCCTGTGGGGTGATGTCCCATTCTGGCTGCTCCAGGTGGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
CDS-3UTR CAA 90 bp GTTGGCCACTATCCTAGTCTGGGCAGGGCTTGGGGACGCCGTGGGCAGCCACAGAGGAGGGGCAGCATCTaGTCTGCCAGCCACCTTGGC +
Preference number: 5 (lower is better)
Translates to: VGHYPSLGRAWGRRGQPQRRGSI*SASHLG
Trigger: GCCAAGGTGGCTGGCAGACAAGATGCTGCCCCTCCT...CTGTGGCTGCCCACGGCGTCCCCAAGCCCTGCCCAGACTAGGATAGTGGCCAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565553.1
CDS-3UTR CAA 90 bp CTCAACAAGGAGGCCCCAGAGGTCGATGAGGGACACGCTGTGGCCACTGCGCTCATGGGGGTGAGCTGGTaGGGGAAGGCGTCCGGGTGT +
Preference number: 5 (lower is better)
Translates to: LNKEAPEVDEGHAVATALMGVSW*GKASGC
Trigger: ACACCCGGACGCCTTCCCCAACCAGCTCACCCCCAT...GAGCGCAGTGGCCACAGCGTGTCCCTCATCGACCTCTGGGGCCTCCTTGTTGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR CAA 90 bp GAGCCGTACTCTTCCCGTGGGGCTGTCCCATCTCCCCGGAGCGTGCCCTGGATTTGTCTGCCAGCCACCTaGGCCAGAGTGCCCAAAGCA +
Preference number: 5 (lower is better)
Translates to: EPYSSRGAVPSPRSVPWICLPAT*ARVPKA
Trigger: TGCTTTGGGCACTCTGGCCAAGGTGGCTGGCAGACA...AATCCAGGGCACGCTCCGGGGAGATGGGACAGCCCCACGGGAAGAGTACGGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000561627.5
CDS-3UTR CAA 90 bp CTAGAGCCGTACTCTTCCCGTGGGGCTGTCCCATCTCCCCGGAGCGTGCCCTGGTCGGGGTCACTGCAGTaGGCCACTATCCTAGTCTGG +
Preference number: 5 (lower is better)
Translates to: LEPYSSRGAVPSPRSVPWSGSLQ*ATILVW
Trigger: CCAGACTAGGATAGTGGCCAACTGCAGTGACCCCGA...CCAGGGCACGCTCCGGGGAGATGGGACAGCCCCACGGGAAGAGTACGGCTCTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000561627.5
CDS-3UTR CAA 90 bp CACTATCCTAGTCTGGGCAGGGCTTGGGGACGCCGTGGGCAGCCACAGTTGCACTGTCTGCCAGCCACCTaGGCCAGAGTGCCCAAAGCA +
Preference number: 5 (lower is better)
Translates to: HYPSLGRAWGRRGQPQLHCLPAT*ARVPKA
Trigger: TGCTTTGGGCACTCTGGCCAAGGTGGCTGGCAGACA...GTGCAACTGTGGCTGCCCACGGCGTCCCCAAGCCCTGCCCAGACTAGGATAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565553.1
CDS-3UTR CAA 90 bp TGGCTTCTCGTAGGCTCCAGGCACTGCCAGCTGGAGCTGCCTAGAGCCGTACTCAGGAGGGGCAGCATCTaGTCTGCCAGCCACCTTGGC +
Preference number: 5 (lower is better)
Translates to: WLLVGSRHCQLELPRAVLRRGSI*SASHLG
Trigger: GCCAAGGTGGCTGGCAGACAAGATGCTGCCCCTCCT...GAGTACGGCTCTAGGCAGCTCCAGCTGGCAGTGCCTGGAGCCTACGAGAAGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000561627.5
CDS-3UTR CAA 90 bp GAGACACGCGCACATCTCCCACCTGGAGCAGCCAGAATGGGACATCACCCCACAGCGGACCGCCTCCTGTaGGTCAGACAGCTTGGCAGG +
Preference number: 5 (lower is better)
Translates to: ETRAHLPPGAARMGHHPTADRLL*VRQLGR
Trigger: CCTGCCAAGCTGTCTGACCAACAGGAGGCGGTCCGC...TGTGGGGTGATGTCCCATTCTGGCTGCTCCAGGTGGGAGATGTGCGCGTGTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR CAA 90 bp CCAGAGGTCGATGAGGGACACGCTGTGGCCACTGCGCTCCCGGACCCCCAGTTCACGTTGTTCAGGACGTaGTATCGACTGAGGGCCACC +
Preference number: 5 (lower is better)
Translates to: PEVDEGHAVATALPDPQFTLFRT*YRLRAT
Trigger: GGTGGCCCTCAGTCGATACAACGTCCTGAACAACGT...GAACTGGGGGTCCGGGAGCGCAGTGGCCACAGCGTGTCCCTCATCGACCTCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR CAA 90 bp GGCAGGGCTTGGGGACGCCGTGGGCAGCCACAGTTGCACATAGCAGTCGGCTTTCCTGCGCTCCTCTGGTaGCACAAACTGCTGGCTCAG +
Preference number: 5 (lower is better)
Translates to: GRAWGRRGQPQLHIAVGFPALLW*HKLLAQ
Trigger: CTGAGCCAGCAGTTTGTGCAACCAGAGGAGCGCAGG...AAAGCCGACTGCTATGTGCAACTGTGGCTGCCCACGGCGTCCCCAAGCCCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565553.1
CDS-3UTR CAA 90 bp GTGTGTCTCCTCTCTGTCACAGTCCTCCGCTTCCTGCCTTGGTCAGGCCCCTGCTGTCTGCCAGCCACCTaGGCCAGAGTGCCCAAAGCA +
Preference number: 5 (lower is better)
Translates to: VCLLSVTVLRFLPWSGPCCLPAT*ARVPKA
Trigger: TGCTTTGGGCACTCTGGCCAAGGTGGCTGGCAGACA...GCAGGGGCCTGACCAAGGCAGGAAGCGGAGGACTGTGACAGAGAGGAGACACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR CAA 90 bp CTGCAACCCTGCCAGGCTGCCGTACAGAGAAGACATGGCTCGGGTTCCACCCCCCGTGGGCAGCCACAGTaGCACATAGCAGTCGGCTTT +
Preference number: 5 (lower is better)
Translates to: LQPCQAAVQRRHGSGSTPRGQPQ*HIAVGF
Trigger: AAAGCCGACTGCTATGTGCAACTGTGGCTGCCCACG...GGGGGTGGAACCCGAGCCATGTCTTCTCTGTACGGCAGCCTGGCAGGGTTGCAG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR CAA 90 bp AGTCTGGGCAGGGCTTGGGGACGCCGTGGGCAGCCACAGTTGCACATAGCAGTCTCGGGGTCACTGCAGTaGGCCACTATCCTAGTCTGG +
Preference number: 5 (lower is better)
Translates to: SLGRAWGRRGQPQLHIAVSGSLQ*ATILVW
Trigger: CCAGACTAGGATAGTGGCCAACTGCAGTGACCCCGA...GACTGCTATGTGCAACTGTGGCTGCCCACGGCGTCCCCAAGCCCTGCCCAGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565553.1
CDS-3UTR CAA 90 bp CAGCTCAGCACTGGAGGCATATGCTGCAGAGGCCGTGGCCAGATGGAGAGGGCCTGTTGGTCAGACAGCTaGGCAGGGTTCTCCTCCTGG +
Preference number: 5 (lower is better)
Translates to: QLSTGGICCRGRGQMERACWSDS*AGFSSW
Trigger: CCAGGAGGAGAACCCTGCCAAGCTGTCTGACCAACA...GGCCCTCTCCATCTGGCCACGGCCTCTGCAGCATATGCCTCCAGTGCTGAGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR CAA 90 bp GCCCCAGAGGTCGATGAGGGACACGCTGTGGCCACTGCGCTCCCGGACCCCCAGTTCAAGGTCTCCACGTaGTTCAGGACGTTGTATCGA +
Preference number: 5 (lower is better)
Translates to: APEVDEGHAVATALPDPQFKVST*FRTLYR
Trigger: TCGATACAACGTCCTGAACAACGTGGAGACCTTGAA...CTGGGGGTCCGGGAGCGCAGTGGCCACAGCGTGTCCCTCATCGACCTCTGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR CAA 90 bp TGGCTTCTCGTAGGCTCCAGGCACTGCCAGCTGGAGCTGCCTAGAGCCGTACTCTGTGGGTCTGAGGACTaGGGCCCTCTGAGGTCCTTC +
Preference number: 5 (lower is better)
Translates to: WLLVGSRHCQLELPRAVLCGSED*GPLRSF
Trigger: GAAGGACCTCAGAGGGCCCAAGTCCTCAGACCCACA...GAGTACGGCTCTAGGCAGCTCCAGCTGGCAGTGCCTGGAGCCTACGAGAAGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290497.11
CDS-3UTR CAA 90 bp CTGTGGCTTCTCGTAGGCTCCAGGCACTGCCAGCTGGAGCTGCCTAGAGCCGTACTGTGCCCCGGATGTTaGTGGCCCTCAGCACCTTCA +
Preference number: 5 (lower is better)
Translates to: LWLLVGSRHCQLELPRAVLCPGC*WPSAPS
Trigger: TGAAGGTGCTGAGGGCCACAAACATCCGGGGCACAG...TACGGCTCTAGGCAGCTCCAGCTGGCAGTGCCTGGAGCCTACGAGAAGCCACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561627.5
CDS TCA 90 bp AAGTTCCAGGAGCAGCCAGGCGGAGTGAGTTATGGCGGAATTGGCTaGGAAGTGGGTGTGGCGCTGGGCCTCACTTCCAGGTGTGGGCTG +
Preference number: 5 (lower is better)
Translates to: KFQEQPGGVSYGGIG*EVGVALGLTSRCGL
Trigger: CAGCCCACACCTGGAAGTGAGGCCCAGCGCCACACCCACTTCTCAGCCAATTCCGCCATAACTCACTCCGCCTGGCTGCTCCTGGAACTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561893.1
CDS CCA 90 bp TCCATCAGCTCCACGTGTAGCCTGGAGCTCAGCACTGGGTTCACGTaGAAGGTAAAGGTGGGTGGGAGGCCTGGCTCTGTGGGAGGCGTA +
Preference number: 5 (lower is better)
Translates to: SISSTCSLELSTGFT*KVKVGGRPGSVGGV
Trigger: TACGCCTCCCACAGAGCCAGGCCTCCCACCCACCTTTACCTTCCACGTGAACCCAGTGCTGAGCTCCAGGCTACACGTGGAGCTGATGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569985.5
CDS-3UTR CAA 90 bp GGGGTCCTCAGCCTTGGCAAACAGATAGCACTCACGGGCCTCCTCCATGTCCTCTGTCTGCCAGCCACCTaGGCCAGAGTGCCCAAAGCA +
Preference number: 5 (lower is better)
Translates to: GVLSLGKQIALTGLLHVLCLPAT*ARVPKA
Trigger: TGCTTTGGGCACTCTGGCCAAGGTGGCTGGCAGACA...GAGGACATGGAGGAGGCCCGTGAGTGCTATCTGTTTGCCAAGGCTGAGGACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR CAA 90 bp AGAGTCCCCATCGCTCCTCCCTCTACAAGCCCTGACCATGAGCAGTGTGTCTCCAGGAGGGGCAGCATCTaGTCTGCCAGCCACCTTGGC +
Preference number: 5 (lower is better)
Translates to: RVPIAPPSTSPDHEQCVSRRGSI*SASHLG
Trigger: GCCAAGGTGGCTGGCAGACAAGATGCTGCCCCTCCT...GGAGACACACTGCTCATGGTCAGGGCTTGTAGAGGGAGGAGCGATGGGGACTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR CAA 90 bp TGGCTTCTCGTAGGCTCCAGGCACTGCCAGCTGGAGCTGCCTAGAGCCGTACTCCGTGGGCAGCCACAGTaGCACATAGCAGTCGGCTTT +
Preference number: 5 (lower is better)
Translates to: WLLVGSRHCQLELPRAVLRGQPQ*HIAVGF
Trigger: AAAGCCGACTGCTATGTGCAACTGTGGCTGCCCACG...GAGTACGGCTCTAGGCAGCTCCAGCTGGCAGTGCCTGGAGCCTACGAGAAGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000561627.5
CDS-3UTR CAA 90 bp AGGGTTCTGACCCTGGCGGACCGCCTCCTGTTGGTCAGACAGCTTGGCAGGGTTTCGGGGTCACTGCAGTaGGCCACTATCCTAGTCTGG +
Preference number: 5 (lower is better)
Translates to: RVLTLADRLLLVRQLGRVSGSLQ*ATILVW
Trigger: CCAGACTAGGATAGTGGCCAACTGCAGTGACCCCGA...AACCCTGCCAAGCTGTCTGACCAACAGGAGGCGGTCCGCCAGGGTCAGAACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR CAA 90 bp GCCAGCTGGAGGGCGCACTTCAAGGTCTCCACGTTGTTCAGGACGTTGTATCGAGCGGACCGCCTCCTGTaGGTCAGACAGCTTGGCAGG +
Preference number: 5 (lower is better)
Translates to: ASWRAHFKVSTLFRTLYRADRLL*VRQLGR
Trigger: CCTGCCAAGCTGTCTGACCAACAGGAGGCGGTCCGC...TCGATACAACGTCCTGAACAACGTGGAGACCTTGAAGTGCGCCCTCCAGCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR CAA 90 bp GAGACACGCGCACATCTCCCACCTGGAGCAGCCAGAATGGGACATCACCCCACAGCTGCCCCACATACCTaGCAGGTAACAGATCCGGGG +
Preference number: 5 (lower is better)
Translates to: ETRAHLPPGAARMGHHPTAAPHT*QVTDPG
Trigger: CCCCGGATCTGTTACCTGCAAGGTATGTGGGGCAGC...TGTGGGGTGATGTCCCATTCTGGCTGCTCCAGGTGGGAGATGTGCGCGTGTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR CAA 90 bp TTGCCTACACTTCTGTGTGAGAAGGTCCCCGCCCACTCTGCACAAGCCCACGTTATGGGGGTGAGCTGGTaGGGGAAGGCGTCCGGGTGT +
Preference number: 5 (lower is better)
Translates to: LPTLLCEKVPAHSAQAHVMGVSW*GKASGC
Trigger: ACACCCGGACGCCTTCCCCAACCAGCTCACCCCCAT...AACGTGGGCTTGTGCAGAGTGGGCGGGGACCTTCTCACACAGAAGTGTAGGCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR CAA 90 bp CTGCAACCCTGCCAGGCTGCCGTACAGAGAAGACATGGCTCGGGTTCCACCCCCGGGGTGTCTGGCCTGTaGATGACAAAGTCCCCAAAG +
Preference number: 5 (lower is better)
Translates to: LQPCQAAVQRRHGSGSTPGVSGL*MTKSPK
Trigger: CTTTGGGGACTTTGTCATCAACAGGCCAGACACCCC...GGGGGTGGAACCCGAGCCATGTCTTCTCTGTACGGCAGCCTGGCAGGGTTGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR CAA 90 bp GGTCCAGAGCCAGCTGGAGGGCGCACTTCAAGGTCTCCACGTTGTTCAGGACGTTGTGGGTCTGAGGACTaGGGCCCTCTGAGGTCCTTC +
Preference number: 5 (lower is better)
Translates to: GPEPAGGRTSRSPRCSGRCGSED*GPLRSF
Trigger: GAAGGACCTCAGAGGGCCCAAGTCCTCAGACCCACA...ACGTCCTGAACAACGTGGAGACCTTGAAGTGCGCCCTCCAGCTGGCTCTGGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000562320.1
ENST00000569985.5
CDS-3UTR CAA 90 bp CTGCCTAGAGCCGTACTCTTCCCGTGGGGCTGTCCCATCTCCCCGGAGCGTGCCAGCCCCTCATTGTTCTaGATAGCAGTGCATCCAGGA +
Preference number: 5 (lower is better)
Translates to: LPRAVLFPWGCPISPERASPSLF*IAVHPG
Trigger: TCCTGGATGCACTGCTATCAAGAACAATGAGGGGCT...GGCACGCTCCGGGGAGATGGGACAGCCCCACGGGAAGAGTACGGCTCTAGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000290497.11
CDS-3UTR CAA 90 bp GGAAGCAGATCCTGCACAGAGTCCCCATCGCTCCTCCCTCTACAAGCCCTGACCCCTGCGCTCCTCTGGTaGCACAAACTGCTGGCTCAG +
Preference number: 5 (lower is better)
Translates to: GSRSCTESPSLLPLQALTPALLW*HKLLAQ
Trigger: CTGAGCCAGCAGTTTGTGCAACCAGAGGAGCGCAGG...GGTCAGGGCTTGTAGAGGGAGGAGCGATGGGGACTCTGTGCAGGATCTGCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR CAA 90 bp AAGGTCCCCGCCCACTCTGCACAAGCCCACGTTTGCCTCCTTCACAAGCCTTGCCTGTGCCCCGGATGTTaGTGGCCCTCAGCACCTTCA +
Preference number: 5 (lower is better)
Translates to: KVPAHSAQAHVCLLHKPCLCPGC*WPSAPS
Trigger: TGAAGGTGCTGAGGGCCACAAACATCCGGGGCACAG...GCAAGGCTTGTGAAGGAGGCAAACGTGGGCTTGTGCAGAGTGGGCGGGGACCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR CAA 90 bp AGAGTCCCCATCGCTCCTCCCTCTACAAGCCCTGACCATGAGCAGTGTGTCTCCCCCTGCCCCCTGCCCTaGATCTTGTCCCAGTCTCCT +
Preference number: 5 (lower is better)
Translates to: RVPIAPPSTSPDHEQCVSPCPLP*ILSQSP
Trigger: AGGAGACTGGGACAAGATCAAGGGCAGGGGGCAGGG...GGAGACACACTGCTCATGGTCAGGGCTTGTAGAGGGAGGAGCGATGGGGACTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS CCA 90 bp TCTGAAGTTCCAGGAGCAGCCAGGCGGAGTGAGTTATGGCGGAATTaGCTGAGAAGTGGGTGTGGCGCTGGGCCTCACTTCCAGGTGTGG +
Preference number: 5 (lower is better)
Translates to: SEVPGAARRSELWRN*LRSGCGAGPHFQVW
Trigger: CCACACCTGGAAGTGAGGCCCAGCGCCACACCCACTTCTCAGCCAATTCCGCCATAACTCACTCCGCCTGGCTGCTCCTGGAACTTCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561893.1
CDS-3UTR CAA 90 bp TTGCCTACACTTCTGTGTGAGAAGGTCCCCGCCCACTCTGCACAAGCCCACGTTAGGAGGGGCAGCATCTaGTCTGCCAGCCACCTTGGC +
Preference number: 5 (lower is better)
Translates to: LPTLLCEKVPAHSAQAHVRRGSI*SASHLG
Trigger: GCCAAGGTGGCTGGCAGACAAGATGCTGCCCCTCCT...AACGTGGGCTTGTGCAGAGTGGGCGGGGACCTTCTCACACAGAAGTGTAGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR CAA 90 bp TGGCTTCTCGTAGGCTCCAGGCACTGCCAGCTGGAGCTGCCTAGAGCCGTACTCGCCACCAGAACCCCGTaGGTGATGACTTCAGATGCA +
Preference number: 5 (lower is better)
Translates to: WLLVGSRHCQLELPRAVLATRTP*VMTSDA
Trigger: TGCATCTGAAGTCATCACCAACGGGGTTCTGGTGGC...GAGTACGGCTCTAGGCAGCTCCAGCTGGCAGTGCCTGGAGCCTACGAGAAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000561627.5
CDS-3UTR CAA 90 bp TCCACACCTGGGGCCAGGTGTGTGCGGAAGGTACGGTTAACCAGGGGGAAGTGCGCCACCAGAACCCCGTaGGTGATGACTTCAGATGCA +
Preference number: 5 (lower is better)
Translates to: STPGARCVRKVRLTRGKCATRTP*VMTSDA
Trigger: TGCATCTGAAGTCATCACCAACGGGGTTCTGGTGGC...GCACTTCCCCCTGGTTAACCGTACCTTCCGCACACACCTGGCCCCAGGTGTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR CAA 90 bp GCTGGCTTCTCAGTGCCCTCAGCCCCTGTTCTGTGTGGGTCTGAGGACTTGGGCTCTTCCCCACTCAAGTaGGTGCGGACGTTGACACTG +
Preference number: 5 (lower is better)
Translates to: AGFSVPSAPVLCGSEDLGSSPLK*VRTLTL
Trigger: CAGTGTCAACGTCCGCACCAACTTGAGTGGGGAAGA...GCCCAAGTCCTCAGACCCACACAGAACAGGGGCTGAGGGCACTGAGAAGCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR CAA 90 bp AGAGTCCCCATCGCTCCTCCCTCTACAAGCCCTGACCATGAGCAGTGTGTCTCCGCTGCCCCACATACCTaGCAGGTAACAGATCCGGGG +
Preference number: 5 (lower is better)
Translates to: RVPIAPPSTSPDHEQCVSAAPHT*QVTDPG
Trigger: CCCCGGATCTGTTACCTGCAAGGTATGTGGGGCAGC...GGAGACACACTGCTCATGGTCAGGGCTTGTAGAGGGAGGAGCGATGGGGACTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR CAA 90 bp ACAAGGAGAGCCCTGCCCCAGTCCAAGCTGCAATTCTGCAAGAGCTTTCCGGGGCTTCTCCTCAGCTGTTaGTCGCTCCACACCTGGGGC +
Preference number: 5 (lower is better)
Translates to: TRRALPQSKLQFCKSFPGLLLSC*SLHTWG
Trigger: GCCCCAGGTGTGGAGCGACAAACAGCTGAGGAGAAG...CCCCGGAAAGCTCTTGCAGAATTGCAGCTTGGACTGGGGCAGGGCTCTCCTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
CDS-3UTR CAA 90 bp TCCTCCATGTCCTCAGGGCCCACCTCGATGCTAGGGAAGGGGATTCCTCGGTCCGGGGTGTCTGGCCTGTaGATGACAAAGTCCCCAAAG +
Preference number: 5 (lower is better)
Translates to: SSMSSGPTSMLGKGIPRSGVSGL*MTKSPK
Trigger: CTTTGGGGACTTTGTCATCAACAGGCCAGACACCCC...GGACCGAGGAATCCCCTTCCCTAGCATCGAGGTGGGCCCTGAGGACATGGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR CAA 90 bp AGAGTCCCCATCGCTCCTCCCTCTACAAGCCCTGACCATGAGCAGTGTGTCTCCTGTGGGTCTGAGGACTaGGGCCCTCTGAGGTCCTTC +
Preference number: 5 (lower is better)
Translates to: RVPIAPPSTSPDHEQCVSCGSED*GPLRSF
Trigger: GAAGGACCTCAGAGGGCCCAAGTCCTCAGACCCACA...GGAGACACACTGCTCATGGTCAGGGCTTGTAGAGGGAGGAGCGATGGGGACTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
CDS-3UTR CAA 90 bp CTCATTCCACTCGGGGTCACTGCAGTTGGCCACTATCCTAGTCTGGGCAGGGCTCTGTGCCCCGGATGTTaGTGGCCCTCAGCACCTTCA +
Preference number: 5 (lower is better)
Translates to: LIPLGVTAVGHYPSLGRALCPGC*WPSAPS
Trigger: TGAAGGTGCTGAGGGCCACAAACATCCGGGGCACAG...AGCCCTGCCCAGACTAGGATAGTGGCCAACTGCAGTGACCCCGAGTGGAATGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565553.1
CDS-3UTR CAA 90 bp GCTGTTCTCTTCTGCCCTACATCCCCAAGAGTCCCTGGAGCGATCTACTGCCCACCTCCTTCACAAGCCTaGCTGGCCTGCGGGGACAGA +
Preference number: 5 (lower is better)
Translates to: AVLFCPTSPRVPGAIYCPPPSQA*LACGDR
Trigger: TCTGTCCCCGCAGGCCAGCAAGGCTTGTGAAGGAGG...TGGGCAGTAGATCGCTCCAGGGACTCTTGGGGATGTAGGGCAGAAGAGAACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR CAA 90 bp CATCCCCTCAGCCCCTCATTGTTCTTGATAGCAGTGCATCCAGGAGCTCGAGGTCCCTCCCCTGGCTTCTaGCTCTGCGTGGCTCCCAGA +
Preference number: 5 (lower is better)
Translates to: HPLSPSLFLIAVHPGARGPSPGF*LCVAPR
Trigger: TCTGGGAGCCACGCAGAGCAAGAAGCCAGGGGAGGG...ACCTCGAGCTCCTGGATGCACTGCTATCAAGAACAATGAGGGGCTGAGGGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR CAA 90 bp TGTGAGAAGGTCCCCGCCCACTCTGCACAAGCCCACGTTTGCCTCCTTCACAAGCGTGGGCAGCCACAGTaGCACATAGCAGTCGGCTTT +
Preference number: 5 (lower is better)
Translates to: CEKVPAHSAQAHVCLLHKRGQPQ*HIAVGF
Trigger: AAAGCCGACTGCTATGTGCAACTGTGGCTGCCCACG...CTTGTGAAGGAGGCAAACGTGGGCTTGTGCAGAGTGGGCGGGGACCTTCTCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR CAA 90 bp AAAGTCCTGGGGCTCATAGGTGAAGTTCATCATGCCATAGGGGGTGTCTGGCCTATGGGGGTGAGCTGGTaGGGGAAGGCGTCCGGGTGT +
Preference number: 5 (lower is better)
Translates to: KVLGLIGEVHHAIGGVWPMGVSW*GKASGC
Trigger: ACACCCGGACGCCTTCCCCAACCAGCTCACCCCCAT...AGGCCAGACACCCCCTATGGCATGATGAACTTCACCTATGAGCCCCAGGACTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR CAA 90 bp ACAGAGTCCCCATCGCTCCTCCCTCTACAAGCCCTGACCATGAGCAGTGTGTCTCTTCTCCTCAGCTGTTaGTCGCTCCACACCTGGGGC +
Preference number: 5 (lower is better)
Translates to: TESPSLLPLQALTMSSVSLLLSC*SLHTWG
Trigger: GCCCCAGGTGTGGAGCGACAAACAGCTGAGGAGAAG...AGACACACTGCTCATGGTCAGGGCTTGTAGAGGGAGGAGCGATGGGGACTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
CDS-3UTR CAA 90 bp GAGCCCTGCCCCAGTCCAAGCTGCAATTCTGCAAGAGCTTTCCGGGGCCTGGGGAGCCCCTCATTGTTCTaGATAGCAGTGCATCCAGGA +
Preference number: 5 (lower is better)
Translates to: EPCPSPSCNSARAFRGLGSPSLF*IAVHPG
Trigger: TCCTGGATGCACTGCTATCAAGAACAATGAGGGGCT...CCCCAGGCCCCGGAAAGCTCTTGCAGAATTGCAGCTTGGACTGGGGCAGGGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
CDS-3UTR CAA 90 bp GACTGTGGTCCAGGTTCGAAGAGTGAAGCCTGGGTAACTGGCAGGGAGACACGCCTCCCAGATTCAGTCTaGTTGGAGCCTCCCCATCCC +
Preference number: 5 (lower is better)
Translates to: DCGPGSKSEAWVTGRETRLPDSV*LEPPHP
Trigger: GGGATGGGGAGGCTCCAACAAGACTGAATCTGGGAG...GCGTGTCTCCCTGCCAGTTACCCAGGCTTCACTCTTCGAACCTGGACCACAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR CAA 90 bp CTCTTCTGCCCTACATCCCCAAGAGTCCCTGGAGCGATCTACTGCCCATCTTCTTGTCTGCCAGCCACCTaGGCCAGAGTGCCCAAAGCA +
Preference number: 5 (lower is better)
Translates to: LFCPTSPRVPGAIYCPSSCLPAT*ARVPKA
Trigger: TGCTTTGGGCACTCTGGCCAAGGTGGCTGGCAGACA...AGAAGATGGGCAGTAGATCGCTCCAGGGACTCTTGGGGATGTAGGGCAGAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR CAA 90 bp TGGCCACACTTGAGGCTTCTCAGGTCAAACAGGAGCAGAGAGAGCTGGTCGCTGCGTGGGCAGCCACAGTaGCACATAGCAGTCGGCTTT +
Preference number: 5 (lower is better)
Translates to: WPHLRLLRSNRSRESWSLRGQPQ*HIAVGF
Trigger: AAAGCCGACTGCTATGTGCAACTGTGGCTGCCCACG...CAGCGACCAGCTCTCTCTGCTCCTGTTTGACCTGAGAAGCCTCAAGTGTGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000565553.1
CDS-3UTR CAA 90 bp ACAGAGTCCCCATCGCTCCTCCCTCTACAAGCCCTGACCATGAGCAGTGTGTCTCGTGGGCAGCCACAGTaGCACATAGCAGTCGGCTTT +
Preference number: 5 (lower is better)
Translates to: TESPSLLPLQALTMSSVSRGQPQ*HIAVGF
Trigger: AAAGCCGACTGCTATGTGCAACTGTGGCTGCCCACG...AGACACACTGCTCATGGTCAGGGCTTGTAGAGGGAGGAGCGATGGGGACTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR CAA 90 bp GGTCCAGAGCCAGCTGGAGGGCGCACTTCAAGGTCTCCACGTTGTTCAGGACGTGGTGTGTTTGTGAGGTaGGCCACACTTGAGGCTTCT +
Preference number: 5 (lower is better)
Translates to: GPEPAGGRTSRSPRCSGRGVFVR*ATLEAS
Trigger: AGAAGCCTCAAGTGTGGCCAACCTCACAAACACACC...ACGTCCTGAACAACGTGGAGACCTTGAAGTGCGCCCTCCAGCTGGCTCTGGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR CAA 90 bp AGCCCAAATAACTGGCTCCCCCAGCCCTCGCAACTCATGCCAGCTGGAGGGCTGTGTGAATCCTGGTGGTaGAGTGGGAAGGTGTGTTTG +
Preference number: 5 (lower is better)
Translates to: SPNNWLPQPSQLMPAGGLCESWW*SGKVCL
Trigger: CAAACACACCTTCCCACTCAACCACCAGGATTCACA...CAGCCCTCCAGCTGGCATGAGTTGCGAGGGCTGGGGGAGCCAGTTATTTGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR CAA 90 bp GTGGCATTGCCTACACTTCTGTGTGAGAAGGTCCCCGCCCACTCTGCACAAGCCGCCACCAGAACCCCGTaGGTGATGACTTCAGATGCA +
Preference number: 5 (lower is better)
Translates to: VALPTLLCEKVPAHSAQAATRTP*VMTSDA
Trigger: TGCATCTGAAGTCATCACCAACGGGGTTCTGGTGGC...GGCTTGTGCAGAGTGGGCGGGGACCTTCTCACACAGAAGTGTAGGCAATGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR CAA 90 bp ACAGAGTCCCCATCGCTCCTCCCTCTACAAGCCCTGACCATGAGCAGTGTGTCTAGTGGGAACGGAGAGTaGATGGCAAAGCCTCCGTCC +
Preference number: 5 (lower is better)
Translates to: TESPSLLPLQALTMSSVSSGNGE*MAKPPS
Trigger: GGACGGAGGCTTTGCCATCAACTCTCCGTTCCCACT...AGACACACTGCTCATGGTCAGGGCTTGTAGAGGGAGGAGCGATGGGGACTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR CAA 90 bp AGGGTTCTCCTCCTGGTACAGGAGATACTCAACAAGGAGGCCCCAGAGGTCGATCTTCTCCTCAGCTGTTaGTCGCTCCACACCTGGGGC +
Preference number: 5 (lower is better)
Translates to: RVLLLVQEILNKEAPEVDLLLSC*SLHTWG
Trigger: GCCCCAGGTGTGGAGCGACAAACAGCTGAGGAGAAG...ATCGACCTCTGGGGCCTCCTTGTTGAGTATCTCCTGTACCAGGAGGAGAACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR CAA 90 bp AGTGCTGTTCTCTTCTGCCCTACATCCCCAAGAGTCCCTGGAGCGATCTACTGCCTTCTCCTCAGCTGTTaGTCGCTCCACACCTGGGGC +
Preference number: 5 (lower is better)
Translates to: SAVLFCPTSPRVPGAIYCLLLSC*SLHTWG
Trigger: GCCCCAGGTGTGGAGCGACAAACAGCTGAGGAGAAG...GCAGTAGATCGCTCCAGGGACTCTTGGGGATGTAGGGCAGAAGAGAACAGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
CDS-3UTR CAA 90 bp AGCAGATCCTGCACAGAGTCCCCATCGCTCCTCCCTCTACAAGCCCTGACCATGACGTTGTTCAGGACGTaGTATCGACTGAGGGCCACC +
Preference number: 5 (lower is better)
Translates to: SRSCTESPSLLPLQALTMTLFRT*YRLRAT
Trigger: GGTGGCCCTCAGTCGATACAACGTCCTGAACAACGT...CATGGTCAGGGCTTGTAGAGGGAGGAGCGATGGGGACTCTGTGCAGGATCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
CDS-3UTR CAA 90 bp ACAAGGAGAGCCCTGCCCCAGTCCAAGCTGCAATTCTGCAAGAGCTTTCCGGGGACGTTGTTCAGGACGTaGTATCGACTGAGGGCCACC +
Preference number: 5 (lower is better)
Translates to: TRRALPQSKLQFCKSFPGTLFRT*YRLRAT
Trigger: GGTGGCCCTCAGTCGATACAACGTCCTGAACAACGT...CCCCGGAAAGCTCTTGCAGAATTGCAGCTTGGACTGGGGCAGGGCTCTCCTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
CDS-3UTR CAA 90 bp TCTCTTCTGCCCTACATCCCCAAGAGTCCCTGGAGCGATCTACTGCCCATCTTCTGTGGGTCTGAGGACTaGGGCCCTCTGAGGTCCTTC +
Preference number: 5 (lower is better)
Translates to: SLLPYIPKSPWSDLLPIFCGSED*GPLRSF
Trigger: GAAGGACCTCAGAGGGCCCAAGTCCTCAGACCCACA...GAAGATGGGCAGTAGATCGCTCCAGGGACTCTTGGGGATGTAGGGCAGAAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
CDS-3UTR CAA 90 bp CAAGGTCTCCACGTTGTTCAGGACGTTGTATCGACTGAGGGCCACCAGCCGATATCGGGGTCACTGCAGTaGGCCACTATCCTAGTCTGG +
Preference number: 5 (lower is better)
Translates to: QGLHVVQDVVSTEGHQPISGSLQ*ATILVW
Trigger: CCAGACTAGGATAGTGGCCAACTGCAGTGACCCCGA...TATCGGCTGGTGGCCCTCAGTCGATACAACGTCCTGAACAACGTGGAGACCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR CAA 90 bp GTGGCATTGCCTACACTTCTGTGTGAGAAGGTCCCCGCCCACTCTGCACAAGCCGGTGTGTTTGTGAGGTaGGCCACACTTGAGGCTTCT +
Preference number: 5 (lower is better)
Translates to: VALPTLLCEKVPAHSAQAGVFVR*ATLEAS
Trigger: AGAAGCCTCAAGTGTGGCCAACCTCACAAACACACC...GGCTTGTGCAGAGTGGGCGGGGACCTTCTCACACAGAAGTGTAGGCAATGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR CAA 90 bp TTCTCAGTGCCCTCAGCCCCTGTTCTGTGTGGGTCTGAGGACTTGGGCCCTCTGTGTGAATCCTGGTGGTaGAGTGGGAAGGTGTGTTTG +
Preference number: 5 (lower is better)
Translates to: FSVPSAPVLCGSEDLGPLCESWW*SGKVCL
Trigger: CAAACACACCTTCCCACTCAACCACCAGGATTCACA...CAGAGGGCCCAAGTCCTCAGACCCACACAGAACAGGGGCTGAGGGCACTGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR CAA 90 bp ACACAAGGAGAGCCCTGCCCCAGTCCAAGCTGCAATTCTGCAAGAGCTTTCCGGGCCACCAGAACCCCGTaGGTGATGACTTCAGATGCA +
Preference number: 5 (lower is better)
Translates to: TQGEPCPSPSCNSARAFRATRTP*VMTSDA
Trigger: TGCATCTGAAGTCATCACCAACGGGGTTCTGGTGGC...CCGGAAAGCTCTTGCAGAATTGCAGCTTGGACTGGGGCAGGGCTCTCCTTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR CAA 90 bp AGTGCTGTTCTCTTCTGCCCTACATCCCCAAGAGTCCCTGGAGCGATCTACTGCACTCAATCCCAGCACTaGCTGCAGGGCCTTGGACAC +
Preference number: 5 (lower is better)
Translates to: SAVLFCPTSPRVPGAIYCTQSQH*LQGLGH
Trigger: GTGTCCAAGGCCCTGCAGCAAGTGCTGGGATTGAGT...GCAGTAGATCGCTCCAGGGACTCTTGGGGATGTAGGGCAGAAGAGAACAGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR CAA 90 bp CTGGAGGGCGCACTTCAAGGTCTCCACGTTGTTCAGGACGTTGTATCGACTGAGACTCAATCCCAGCACTaGCTGCAGGGCCTTGGACAC +
Preference number: 5 (lower is better)
Translates to: LEGALQGLHVVQDVVSTETQSQH*LQGLGH
Trigger: GTGTCCAAGGCCCTGCAGCAAGTGCTGGGATTGAGT...CTCAGTCGATACAACGTCCTGAACAACGTGGAGACCTTGAAGTGCGCCCTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR CAA 90 bp ATAGGGGGTGTCTGGCCTGTTGATGACAAAGTCCCCAAAGGCCTTCTCCTCAGCTGTTGGTCAGACAGCTaGGCAGGGTTCTCCTCCTGG +
Preference number: 5 (lower is better)
Translates to: IGGVWPVDDKVPKGLLLSCWSDS*AGFSSW
Trigger: CCAGGAGGAGAACCCTGCCAAGCTGTCTGACCAACA...GCTGAGGAGAAGGCCTTTGGGGACTTTGTCATCAACAGGCCAGACACCCCCTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR CAA 90 bp CAGCCCCTCATTGTTCTTGATAGCAGTGCATCCAGGAGCTCGAGGTGGGGTTGGTCTTCCCCACTCAAGTaGGTGCGGACGTTGACACTG +
Preference number: 5 (lower is better)
Translates to: QPLIVLDSSASRSSRWGWSSPLK*VRTLTL
Trigger: CAGTGTCAACGTCCGCACCAACTTGAGTGGGGAAGA...CCAACCCCACCTCGAGCTCCTGGATGCACTGCTATCAAGAACAATGAGGGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR CAA 90 bp CAAGGTCTCCACGTTGTTCAGGACGTTGTATCGACTGAGGGCCACCAGCCGATAAGTGGGAACGGAGAGTaGATGGCAAAGCCTCCGTCC +
Preference number: 5 (lower is better)
Translates to: QGLHVVQDVVSTEGHQPISGNGE*MAKPPS
Trigger: GGACGGAGGCTTTGCCATCAACTCTCCGTTCCCACT...TATCGGCTGGTGGCCCTCAGTCGATACAACGTCCTGAACAACGTGGAGACCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290497.11
ENST00000569985.5
CDS-3UTR CAA 90 bp TCCACACCTGGGGCCAGGTGTGTGCGGAAGGTACGGTTAACCAGGGGGAAGTGCTTCAAGGTCTCCACGTaGTTCAGGACGTTGTATCGA +
Preference number: 5 (lower is better)
Translates to: STPGARCVRKVRLTRGKCFKVST*FRTLYR
Trigger: TCGATACAACGTCCTGAACAACGTGGAGACCTTGAA...GCACTTCCCCCTGGTTAACCGTACCTTCCGCACACACCTGGCCCCAGGTGTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000562320.1
ENST00000569985.5
CDS-3UTR CAA 90 bp GCTGTCTTTAGCTATTCTCCTCCAAAGCTATGCAGAGCCTTCCAACCTTTCAGAGAGCTCGAGGTGGGGTaGGGGCTTGGGCCGCTCTGC +
Preference number: 5 (lower is better)
Translates to: AVFSYSPPKLCRAFQPFRELEVG*GLGPLC
Trigger: GCAGAGCGGCCCAAGCCCCAACCCCACCTCGAGCTC...TCTGAAAGGTTGGAAGGCTCTGCATAGCTTTGGAGGAGAATAGCTAAAGACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR CAA 90 bp CAGCCCCTCATTGTTCTTGATAGCAGTGCATCCAGGAGCTCGAGGTGGGGTTGGTGCACAAGCCCACGTTaGCCTCCTTCACAAGCCTTG +
Preference number: 5 (lower is better)
Translates to: QPLIVLDSSASRSSRWGWCTSPR*PPSQAL
Trigger: CAAGGCTTGTGAAGGAGGCAAACGTGGGCTTGTGCA...CCAACCCCACCTCGAGCTCCTGGATGCACTGCTATCAAGAACAATGAGGGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR CAA 90 bp TATTTGCATGATGTGGCCACTACACACATCACCAGAGACTGTGGTCCAGGTTCGAGGAGGGGCAGCATCTaGTCTGCCAGCCACCTTGGC +
Preference number: 5 (lower is better)
Translates to: YLHDVATTHITRDCGPGSRRGSI*SASHLG
Trigger: GCCAAGGTGGCTGGCAGACAAGATGCTGCCCCTCCT...CGAACCTGGACCACAGTCTCTGGTGATGTGTGTAGTGGCCACATCATGCAAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR CAA 90 bp CTCTTCTGCCCTACATCCCCAAGAGTCCCTGGAGCGATCTACTGCCCATCTTCTGGGGTGTCTGGCCTGTaGATGACAAAGTCCCCAAAG +
Preference number: 5 (lower is better)
Translates to: LFCPTSPRVPGAIYCPSSGVSGL*MTKSPK
Trigger: CTTTGGGGACTTTGTCATCAACAGGCCAGACACCCC...AGAAGATGGGCAGTAGATCGCTCCAGGGACTCTTGGGGATGTAGGGCAGAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
CDS-3UTR CAA 90 bp ATAGGGGGTGTCTGGCCTGTTGATGACAAAGTCCCCAAAGGCCTTCTCCTCAGCACGTTGTTCAGGACGTaGTATCGACTGAGGGCCACC +
Preference number: 5 (lower is better)
Translates to: IGGVWPVDDKVPKGLLLSTLFRT*YRLRAT
Trigger: GGTGGCCCTCAGTCGATACAACGTCCTGAACAACGT...GCTGAGGAGAAGGCCTTTGGGGACTTTGTCATCAACAGGCCAGACACCCCCTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000562320.1
ENST00000569985.5
CDS-3UTR CAA 90 bp GAGACACGCGCACATCTCCCACCTGGAGCAGCCAGAATGGGACATCACCCCACATTCAAGGTCTCCACGTaGTTCAGGACGTTGTATCGA +
Preference number: 5 (lower is better)
Translates to: ETRAHLPPGAARMGHHPTFKVST*FRTLYR
Trigger: TCGATACAACGTCCTGAACAACGTGGAGACCTTGAA...TGTGGGGTGATGTCCCATTCTGGCTGCTCCAGGTGGGAGATGTGCGCGTGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
CDS-3UTR CAA 90 bp AGCAGATCCTGCACAGAGTCCCCATCGCTCCTCCCTCTACAAGCCCTGACCATGAGCCCCTCATTGTTCTaGATAGCAGTGCATCCAGGA +
Preference number: 5 (lower is better)
Translates to: SRSCTESPSLLPLQALTMSPSLF*IAVHPG
Trigger: TCCTGGATGCACTGCTATCAAGAACAATGAGGGGCT...CATGGTCAGGGCTTGTAGAGGGAGGAGCGATGGGGACTCTGTGCAGGATCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
CDS-3UTR CAA 90 bp ACATCCCCAAGAGTCCCTGGAGCGATCTACTGCCCATCTTCTCCAAAAACACACCTGTGCCCCGGATGTTaGTGGCCCTCAGCACCTTCA +
Preference number: 5 (lower is better)
Translates to: TSPRVPGAIYCPSSPKTHLCPGC*WPSAPS
Trigger: TGAAGGTGCTGAGGGCCACAAACATCCGGGGCACAG...GTGTGTTTTTGGAGAAGATGGGCAGTAGATCGCTCCAGGGACTCTTGGGGATGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397272.7
ENST00000569985.5
CDS-3UTR CAA 90 bp TTGCTTTTATTCAGTGCAGGCACAATGCCAAAAGCCTGGAGCAAACACTGGAGGCCCACCTCCAGGAACTaGCACACCCTCCTGCCCCAC +
Preference number: 5 (lower is better)
Translates to: LLLFSAGTMPKAWSKHWRPTSRN*HTLLPH
Trigger: GTGGGGCAGGAGGGTGTGCAAGTTCCTGGAGGTGGG...CCTCCAGTGTTTGCTCCAGGCTTTTGGCATTGTGCCTGCACTGAATAAAAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR CAA 90 bp GGTTCTAGGTATTTGGAGAGTCCCTGGCGGGTCAGGGGAAATGGAGAAGAGGGAGCAGGCACAGCAGTGTaGATGACAATGGCCACAGCA +
Preference number: 5 (lower is better)
Translates to: GSRYLESPWRVRGNGEEGAGTAV*MTMATA
Trigger: TGCTGTGGCCATTGTCATCAACACTGCTGTGCCTGC...TCCCTCTTCTCCATTTCCCCTGACCCGCCAGGGACTCTCCAAATACCTAGAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR CAA 90 bp AAGGTCCCCGCCCACTCTGCACAAGCCCACGTTTGCCTCCTTCACAAGCCTTGCGTGTATGCCTTTTTCTaGGGAGAGGGTCTGTGGTTT +
Preference number: 5 (lower is better)
Translates to: KVPAHSAQAHVCLLHKPCVYAFF*GEGLWF
Trigger: AAACCACAGACCCTCTCCCAAGAAAAAGGCATACAC...GCAAGGCTTGTGAAGGAGGCAAACGTGGGCTTGTGCAGAGTGGGCGGGGACCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR CAA 90 bp ACAAGGAGAGCCCTGCCCCAGTCCAAGCTGCAATTCTGCAAGAGCTTTCCGGGGACCAATCTCCTACACTaGTGGCCCCCTTTTTCTTCC +
Preference number: 5 (lower is better)
Translates to: TRRALPQSKLQFCKSFPGTNLLH*WPPFSS
Trigger: GGAAGAAAAAGGGGGCCACAAGTGTAGGAGATTGGT...CCCCGGAAAGCTCTTGCAGAATTGCAGCTTGGACTGGGGCAGGGCTCTCCTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR CAA 90 bp GTAGTGGAAGGTCTCATTCCACTCGGGGTCACTGCAGTTGGCCACTATCCTAGTGCTGAAAAGGTTTCCTaGGGGAGGGCAGGTCTGTGC +
Preference number: 5 (lower is better)
Translates to: VVEGLIPLGVTAVGHYPSAEKVS*GRAGLC
Trigger: GCACAGACCTGCCCTCCCCAAGGAAACCTTTTCAGC...ACTAGGATAGTGGCCAACTGCAGTGACCCCGAGTGGAATGAGACCTTCCACTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000565553.1
CDS CCA 90 bp TGGAGAGGAGCCTACGTATTTCCTTCTGGCTCTTCTCTCACCTCCTaGTACAGGAGATACTCAACAAGGAGGCCCCAGAGGTCGATGAGG +
Preference number: 5 (lower is better)
Translates to: WRGAYVFPSGSSLTS*YRRYSTRRPQRSMR
Trigger: CCTCATCGACCTCTGGGGCCTCCTTGTTGAGTATCTCCTGTACCAGGAGGTGAGAGAAGAGCCAGAAGGAAATACGTAGGCTCCTCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561893.1
CDS CCA 90 bp AAGGGGCGGGTGGAAGGAGTGGAGAGGAGCCTACGTATTTCCTTCTaGCTCTTCTCTCACCTCCTGGTACAGGAGATACTCAACAAGGAG +
Preference number: 5 (lower is better)
Translates to: KGRVEGVERSLRISF*LFSHLLVQEILNKE
Trigger: CTCCTTGTTGAGTATCTCCTGTACCAGGAGGTGAGAGAAGAGCCAGAAGGAAATACGTAGGCTCCTCTCCACTCCTTCCACCCGCCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561893.1
CDS-3UTR CAA 90 bp ACACAAGGAGAGCCCTGCCCCAGTCCAAGCTGCAATTCTGCAAGAGCTTTCCGGAGCCCCTCATTGTTCTaGATAGCAGTGCATCCAGGA +
Preference number: 5 (lower is better)
Translates to: TQGEPCPSPSCNSARAFRSPSLF*IAVHPG
Trigger: TCCTGGATGCACTGCTATCAAGAACAATGAGGGGCT...CCGGAAAGCTCTTGCAGAATTGCAGCTTGGACTGGGGCAGGGCTCTCCTTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
CDS-3UTR CAA 90 bp AGCCCAAATAACTGGCTCCCCCAGCCCTCGCAACTCATGCCAGCTGGAGGGCTGATGGTGAGACTATATTaGCATGATGTGGCCACTACA +
Preference number: 5 (lower is better)
Translates to: SPNNWLPQPSQLMPAGGLMVRLY*HDVATT
Trigger: TGTAGTGGCCACATCATGCAAATATAGTCTCACCAT...CAGCCCTCCAGCTGGCATGAGTTGCGAGGGCTGGGGGAGCCAGTTATTTGGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR CAA 90 bp GCTGGCTTCTCAGTGCCCTCAGCCCCTGTTCTGTGTGGGTCTGAGGACTTGGGCATGGTGAGACTATATTaGCATGATGTGGCCACTACA +
Preference number: 5 (lower is better)
Translates to: AGFSVPSAPVLCGSEDLGMVRLY*HDVATT
Trigger: TGTAGTGGCCACATCATGCAAATATAGTCTCACCAT...GCCCAAGTCCTCAGACCCACACAGAACAGGGGCTGAGGGCACTGAGAAGCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
CDS-3UTR CAA 90 bp ATTCTCTCCACACCCCGCTGTGAAATGAGTGCTGTTCTCTTCTGCCCTACATCCCCCCTGCCCTTGATCTaGTCCCAGTCTCCTCCCAAA +
Preference number: 5 (lower is better)
Translates to: ILSTPRCEMSAVLFCPTSPLPLI*SQSPPK
Trigger: TTTGGGAGGAGACTGGGACAAGATCAAGGGCAGGGG...GGATGTAGGGCAGAAGAGAACAGCACTCATTTCACAGCGGGGTGTGGAGAGAAT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR CAA 90 bp TATTTGCATGATGTGGCCACTACACACATCACCAGAGACTGTGGTCCAGGTTCGTCGGGGTCACTGCAGTaGGCCACTATCCTAGTCTGG +
Preference number: 5 (lower is better)
Translates to: YLHDVATTHITRDCGPGSSGSLQ*ATILVW
Trigger: CCAGACTAGGATAGTGGCCAACTGCAGTGACCCCGA...CGAACCTGGACCACAGTCTCTGGTGATGTGTGTAGTGGCCACATCATGCAAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR CAA 90 bp AGTGCTGTTCTCTTCTGCCCTACATCCCCAAGAGTCCCTGGAGCGATCTACTGCTGTGAATCCTGGTGGTaGAGTGGGAAGGTGTGTTTG +
Preference number: 5 (lower is better)
Translates to: SAVLFCPTSPRVPGAIYCCESWW*SGKVCL
Trigger: CAAACACACCTTCCCACTCAACCACCAGGATTCACA...GCAGTAGATCGCTCCAGGGACTCTTGGGGATGTAGGGCAGAAGAGAACAGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR CAA 90 bp TTGCTTTTATTCAGTGCAGGCACAATGCCAAAAGCCTGGAGCAAACACTGGAGGGCTGCCCCACATACCTaGCAGGTAACAGATCCGGGG +
Preference number: 5 (lower is better)
Translates to: LLLFSAGTMPKAWSKHWRAAPHT*QVTDPG
Trigger: CCCCGGATCTGTTACCTGCAAGGTATGTGGGGCAGC...CCTCCAGTGTTTGCTCCAGGCTTTTGGCATTGTGCCTGCACTGAATAAAAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR CAA 90 bp GGAAGCAGATCCTGCACAGAGTCCCCATCGCTCCTCCCTCTACAAGCCCTGACCATGGTGAGACTATATTaGCATGATGTGGCCACTACA +
Preference number: 5 (lower is better)
Translates to: GSRSCTESPSLLPLQALTMVRLY*HDVATT
Trigger: TGTAGTGGCCACATCATGCAAATATAGTCTCACCAT...GGTCAGGGCTTGTAGAGGGAGGAGCGATGGGGACTCTGTGCAGGATCTGCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
CDS-3UTR CAA 90 bp GGGGTTGGGGCTTGGGCCGCTCTGCAGGAAGTGTGGATGGATGCATCTCTGCTTTTTACTAACAAGTTATaGATGACGGCAGGCACAGCA +
Preference number: 5 (lower is better)
Translates to: GVGAWAALQEVWMDASLLFTNKL*MTAGTA
Trigger: TGCTGTGCCTGCCGTCATCAATAACTTGTTAGTAAA...AAGCAGAGATGCATCCATCCACACTTCCTGCAGAGCGGCCCAAGCCCCAACCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR CAA 90 bp AATGGCCACAGCAGGAGCCAGATAAACTCCCAGATAAACCTCTCACTGCTGAACCCAGATTCAGTCTTGTaGGAGCCTCCCCATCCCTGG +
Preference number: 5 (lower is better)
Translates to: NGHSRSQINSQINLSLLNPDSVL*EPPHPW
Trigger: CCAGGGATGGGGAGGCTCCAACAAGACTGAATCTGG...GTTCAGCAGTGAGAGGTTTATCTGGGAGTTTATCTGGCTCCTGCTGTGGCCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR CAA 90 bp CAGATAAACTCCCAGATAAACCTCTCACTGCTGAACCAAGGGGAGGGGCCGTGGAGAAGCTGGAGCTGCTaGCTTTTATTCAGTGCAGGC +
Preference number: 5 (lower is better)
Translates to: QINSQINLSLLNQGEGPWRSWSC*LLFSAG
Trigger: GCCTGCACTGAATAAAAGCAAGCAGCTCCAGCTTCT...CCACGGCCCCTCCCCTTGGTTCAGCAGTGAGAGGTTTATCTGGGAGTTTATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR CAA 90 bp ATTCTCTCCACACCCCGCTGTGAAATGAGTGCTGTTCTCTTCTGCCCTACATCCGGTGTGTTTGTGAGGTaGGCCACACTTGAGGCTTCT +
Preference number: 5 (lower is better)
Translates to: ILSTPRCEMSAVLFCPTSGVFVR*ATLEAS
Trigger: AGAAGCCTCAAGTGTGGCCAACCTCACAAACACACC...GGATGTAGGGCAGAAGAGAACAGCACTCATTTCACAGCGGGGTGTGGAGAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR CAA 90 bp CTATATTTGCATGATGTGGCCACTACACACATCACCAGAGACTGTGGTCCAGGTTGTTGGTCAGACAGCTaGGCAGGGTTCTCCTCCTGG +
Preference number: 5 (lower is better)
Translates to: LYLHDVATTHITRDCGPGCWSDS*AGFSSW
Trigger: CCAGGAGGAGAACCCTGCCAAGCTGTCTGACCAACA...ACCTGGACCACAGTCTCTGGTGATGTGTGTAGTGGCCACATCATGCAAATATAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR CAA 90 bp TATTTGCATGATGTGGCCACTACACACATCACCAGAGACTGTGGTCCAGGTTCGTCTTCCCCACTCAAGTaGGTGCGGACGTTGACACTG +
Preference number: 5 (lower is better)
Translates to: YLHDVATTHITRDCGPGSSSPLK*VRTLTL
Trigger: CAGTGTCAACGTCCGCACCAACTTGAGTGGGGAAGA...CGAACCTGGACCACAGTCTCTGGTGATGTGTGTAGTGGCCACATCATGCAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000569985.5
CDS-3UTR CAA 90 bp CTATATTTGCATGATGTGGCCACTACACACATCACCAGAGACTGTGGTCCAGGTGGGGTGTCTGGCCTGTaGATGACAAAGTCCCCAAAG +
Preference number: 5 (lower is better)
Translates to: LYLHDVATTHITRDCGPGGVSGL*MTKSPK
Trigger: CTTTGGGGACTTTGTCATCAACAGGCCAGACACCCC...ACCTGGACCACAGTCTCTGGTGATGTGTGTAGTGGCCACATCATGCAAATATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
CDS-3UTR CAA 90 bp ACAGAGTCCCCATCGCTCCTCCCTCTACAAGCCCTGACCATGAGCAGTGTGTCTATGGTGAGACTATATTaGCATGATGTGGCCACTACA +
Preference number: 5 (lower is better)
Translates to: TESPSLLPLQALTMSSVSMVRLY*HDVATT
Trigger: TGTAGTGGCCACATCATGCAAATATAGTCTCACCAT...AGACACACTGCTCATGGTCAGGGCTTGTAGAGGGAGGAGCGATGGGGACTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
CDS TCA 90 bp GCTGAGAAGTGGGTGTGGCGCTGGGCCTCACTTCCAGGTGTGGGCTaGAATCACTTTCAAAACATCCTGAGAACAACTAAAATCACTCTC +
Preference number: 5 (lower is better)
Translates to: AEKWVWRWASLPGVG*NHFQNILRTTKITL
Trigger: GAGAGTGATTTTAGTTGTTCTCAGGATGTTTTGAAAGTGATTTCAGCCCACACCTGGAAGTGAGGCCCAGCGCCACACCCACTTCTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561893.1
CDS-3UTR CAA 90 bp CTGTCTTTAGCTATTCTCCTCCAAAGCTATGCAGAGCCTTCCAACCTTTCAGAAAGTGGGAACGGAGAGTaGATGGCAAAGCCTCCGTCC +
Preference number: 5 (lower is better)
Translates to: LSLAILLQSYAEPSNLSESGNGE*MAKPPS
Trigger: GGACGGAGGCTTTGCCATCAACTCTCCGTTCCCACT...TTCTGAAAGGTTGGAAGGCTCTGCATAGCTTTGGAGGAGAATAGCTAAAGACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR CAA 90 bp ATGCATCTCTGCTTTCCATCTCAGTGTAAGGAGGACAGCTGGCTTCTCAGTGCCTTCAAGGTCTCCACGTaGTTCAGGACGTTGTATCGA +
Preference number: 5 (lower is better)
Translates to: MHLCFPSQCKEDSWLLSAFKVST*FRTLYR
Trigger: TCGATACAACGTCCTGAACAACGTGGAGACCTTGAA...GGCACTGAGAAGCCAGCTGTCCTCCTTACACTGAGATGGAAAGCAGAGATGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000562320.1
ENST00000569985.5
CDS-3UTR CAA 90 bp ATGCATCTCTGCTTTCCATCTCAGTGTAAGGAGGACAGCTGGCTTCTCAGTGCCAGTGAGAAACAAAACTaGCCAAGACCCATTGGATGC +
Preference number: 5 (lower is better)
Translates to: MHLCFPSQCKEDSWLLSASEKQN*PRPIGC
Trigger: GCATCCAATGGGTCTTGGCAAGTTTTGTTTCTCACT...GGCACTGAGAAGCCAGCTGTCCTCCTTACACTGAGATGGAAAGCAGAGATGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR CAA 90 bp CTGTCTTTAGCTATTCTCCTCCAAAGCTATGCAGAGCCTTCCAACCTTTCAGAAAGAGGTTCTAGGTATTaGGAGAGTCCCTGGCGGGTC +
Preference number: 5 (lower is better)
Translates to: LSLAILLQSYAEPSNLSERGSRY*ESPWRV
Trigger: GACCCGCCAGGGACTCTCCAAATACCTAGAACCTCT...TTCTGAAAGGTTGGAAGGCTCTGCATAGCTTTGGAGGAGAATAGCTAAAGACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS-3UTR CAA 90 bp CTATATTTGCATGATGTGGCCACTACACACATCACCAGAGACTGTGGTCCAGGTGCATTGCATGCTTTTTaGTGGTTGGTGGGTGACGAT +
Preference number: 5 (lower is better)
Translates to: LYLHDVATTHITRDCGPGALHAF*WLVGDD
Trigger: ATCGTCACCCACCAACCACAAAAAAGCATGCAATGC...ACCTGGACCACAGTCTCTGGTGATGTGTGTAGTGGCCACATCATGCAAATATAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397272.7
CDS CCA 72 bp TGCCAGCCACCTTGGCCAGAGTGCCCAAAGCATGGCTaGGCAGCCCGGGCCCCAGCAGGGAACCCTGCCTGC +
Preference number: 6 (lower is better)
Translates to: CQPPWPECPKHG*AARAPAGNPAC
Trigger: GCAGGCAGGGTTCCCTGCTGGGGCCCGGGCTGCCCAGCCATGCTTTGGGCACTCTGGCCAAGGTGGCTGGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000561627.5
ENST00000565553.1
ENST00000569985.5
CDS GCA 72 bp GCATGGCTGGGCAGCCCGGGCCCCAGCAGGGAACCCTaGCTGCGCTCCTCTGGTTGCACAAACTGCTGGCTC +
Preference number: 6 (lower is better)
Translates to: AWLGSPGPSREP*LRSSGCTNCWL
Trigger: GAGCCAGCAGTTTGTGCAACCAGAGGAGCGCAGGCAGGGTTCCCTGCTGGGGCCCGGGCTGCCCAGCCATGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397272.7
ENST00000565553.1
ENST00000569985.5
CDS CCA 72 bp CCCCAGGAGGGGCAGCATCTTGTCTGCCAGCCACCTTaGCCAGAGTGCCCAAAGCATGGCTGGGCAGCCCGG +
Preference number: 6 (lower is better)
Translates to: PQEGQHLVCQPP*PECPKHGWAAR
Trigger: CCGGGCTGCCCAGCCATGCTTTGGGCACTCTGGCCAAGGTGGCTGGCAGACAAGATGCTGCCCCTCCTGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290497.11
ENST00000397272.7
ENST00000561627.5
ENST00000565553.1
ENST00000569985.5
CDS CAA 72 bp CTGGGCAGGGCTTGGGGACGCCGTGGGCAGCCACAGTaGCACATAGCAGTCGGCTTTGGACACCGCCAGTGC +
Preference number: 6 (lower is better)
Translates to: LGRAWGRRGQPQ*HIAVGFGHRQC
Trigger: GCACTGGCGGTGTCCAAAGCCGACTGCTATGTGCAACTGTGGCTGCCCACGGCGTCCCCAAGCCCTGCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290497.11
CDS CAA 72 bp CTGGGCAGGGCTTGGGGACGCCGTGGGCAGCCACAGTaGCACATAGCAGTCGGCTTTGGACAGCAGGTCTGT +
Preference number: 6 (lower is better)
Translates to: LGRAWGRRGQPQ*HIAVGFGQQVC
Trigger: ACAGACCTGCTGTCCAAAGCCGACTGCTATGTGCAACTGTGGCTGCCCACGGCGTCCCCAAGCCCTGCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397272.7
ENST00000561627.5
ENST00000569985.5
CDS CAA 90 bp TATCCTAGTCTGGGCAGGGCTTGGGGACGCCGTGGGCAGCCACAGTaGCACATAGCAGTCGGCTTTGGACACCGCCAGTGCCTCCACAGA +
Preference number: 6 (lower is better)
Translates to: YPSLGRAWGRRGQPQ*HIAVGFGHRQCLHR
Trigger: TCTGTGGAGGCACTGGCGGTGTCCAAAGCCGACTGCTATGTGCAACTGTGGCTGCCCACGGCGTCCCCAAGCCCTGCCCAGACTAGGATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290497.11
CDS TCA 72 bp GAGCAGCCAGGCGGAGTGAGTTATGGCGGAATTGGCTaGGAAGTGGGTGTGGCGCTGGGCCTCACTTCCAGG +
Preference number: 6 (lower is better)
Translates to: EQPGGVSYGGIG*EVGVALGLTSR
Trigger: CCTGGAAGTGAGGCCCAGCGCCACACCCACTTCTCAGCCAATTCCGCCATAACTCACTCCGCCTGGCTGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561893.1
CDS CCA 72 bp GCTCAGCACTGGGTTCACGTGGAAGGTAAAGGTGGGTaGGAGGCCTGGCTCTGTGGGAGGCGTACTCTTCCC +
Preference number: 6 (lower is better)
Translates to: AQHWVHVEGKGG*EAWLCGRRTLP
Trigger: GGGAAGAGTACGCCTCCCACAGAGCCAGGCCTCCCACCCACCTTTACCTTCCACGTGAACCCAGTGCTGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569985.5
CDS CCA 72 bp TCTGAAGTTCCAGGAGCAGCCAGGCGGAGTGAGTTATaGCGGAATTGGCTGAGAAGTGGGTGTGGCGCTGGG +
Preference number: 6 (lower is better)
Translates to: SEVPGAARRSEL*RNWLRSGCGAG
Trigger: CCCAGCGCCACACCCACTTCTCAGCCAATTCCGCCATAACTCACTCCGCCTGGCTGCTCCTGGAACTTCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561893.1
CDS CAA 72 bp CTTCTCCAGAACAAATTCCACTCGGGGTCACTGCAGTaGGCCACTATCCTAGTCTGGGCAGGGCTTGGGGAC +
Preference number: 6 (lower is better)
Translates to: LLQNKFHSGSLQ*ATILVWAGLGD
Trigger: GTCCCCAAGCCCTGCCCAGACTAGGATAGTGGCCAACTGCAGTGACCCCGAGTGGAATTTGTTCTGGAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561627.5
CDS GCA 72 bp TGTCATCTTCAAGACCTTTCCAGGCCACGAACTCCCTaGCAGCCACATAGTCCTTGTGCAAGCAGAGACCCC +
Preference number: 6 (lower is better)
Translates to: CHLQDLSRPRTP*QPHSPCASRDP
Trigger: GGGGTCTCTGCTTGCACAAGGACTATGTGGCTGGCAGGGAGTTCGTGGCCTGGAAAGGTCTTGAAGATGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562320.1