RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PKNOX2 (Homo sapiens)

Ensembl gene IDs: ENSG00000165495

Ensembl transcript IDs: ENST00000298282.14, ENST00000526955.1, ENST00000527238.5, ENST00000530517.5, ENST00000531116.5, ENST00000531212.5, ENST00000532623.5, ENST00000557814.5, ENST00000558705.1, ENST00000558729.5, ENST00000559662.5, ENST00000561115.5, ENST00000561298.1, ENST00000561399.5

Found 489 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCCAGGGCTGTGGATAGCAGGGTTAGAACAGCTGGGTGGGGTGTGTaGGATGGGCATCCCCGCAGGCTCTTGGGTGCCATTCTCTGGGCC +
Preference number: 1 (lower is better)
Translates to: SRAVDSRVRTAGWGV*DGHPRRLLGAILWA
Trigger: GGCCCAGAGAATGGCACCCAAGAGCCTGCGGGGATGCCCATCCCACACACCCCACCCAGCTGTTCTAACCCTGCTATCCACAGCCCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR CCA 90 bp GGGCCGGTGCTGAGACTTGATCTTCTTGGCTTTGGGGGCAGGATCTaGGTTGCTGGCATCAAGCATGGGCTGCAGGATGCGCCTCCGGGC +
Preference number: 1 (lower is better)
Translates to: GPVLRLDLLGFGGRI*VAGIKHGLQDAPPG
Trigger: GCCCGGAGGCGCATCCTGCAGCCCATGCTTGATGCCAGCAACCCAGATCCTGCCCCCAAAGCCAAGAAGATCAAGTCTCAGCACCGGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532623.5
3UTR CCA 90 bp AGAGGGAACCGGAGGAGAGGGTGCCAACCAAGGGGGTCTGGAAGGTaGGTGGGAGGGTATGTGTTAGGGTGGACAGTGGAGAGCCTCCTC +
Preference number: 1 (lower is better)
Translates to: RGNRRRGCQPRGSGR*VGGYVLGWTVESLL
Trigger: GAGGAGGCTCTCCACTGTCCACCCTAACACATACCCTCCCACCCACCTTCCAGACCCCCTTGGTTGGCACCCTCTCCTCCGGTTCCCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR CCA 90 bp TGGGGTGAGAGGGAACCGGAGGAGAGGGTGCCAACCAAGGGGGTCTaGAAGGTGGGTGGGAGGGTATGTGTTAGGGTGGACAGTGGAGAG +
Preference number: 1 (lower is better)
Translates to: WGEREPEERVPTKGV*KVGGRVCVRVDSGE
Trigger: CTCTCCACTGTCCACCCTAACACATACCCTCCCACCCACCTTCCAGACCCCCTTGGTTGGCACCCTCTCCTCCGGTTCCCTCTCACCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR CCA 90 bp GTGAGTCCAGATCTCACTCCTGTCTTTCCACACAGGCTGCTCGACTaGCCCCGCCAAACAGAGTCCTCGGCAGTTCCAGGGAAGTGGGGC +
Preference number: 1 (lower is better)
Translates to: VSPDLTPVFPHRLLD*PRQTESSAVPGKWG
Trigger: GCCCCACTTCCCTGGAACTGCCGAGGACTCTGTTTGGCGGGGCCAGTCGAGCAGCCTGTGTGGAAAGACAGGAGTGAGATCTGGACTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR TCA 90 bp CCCGCAGCGATGGAGTTGGGCCAGAATCTTTGGGTGGGCCGGTGCTaGGACTTGATCTTCTTGGCTTTGGGGGCAGGATCTGGGTTGCTG +
Preference number: 1 (lower is better)
Translates to: PAAMELGQNLWVGRC*DLIFLALGAGSGLL
Trigger: CAGCAACCCAGATCCTGCCCCCAAAGCCAAGAAGATCAAGTCTCAGCACCGGCCCACCCAAAGATTCTGGCCCAACTCCATCGCTGCGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532623.5
3UTR GCA 90 bp CCCCGGGCAAAGGCCTACTCTGCGAACAGCACCAATCTGCCTCAGTaGAGGGCTTGTAAACAACTCAAGTCCTTCCGTGGGTGGGGGCCA +
Preference number: 1 (lower is better)
Translates to: PRAKAYSANSTNLPQ*RACKQLKSFRGWGP
Trigger: TGGCCCCCACCCACGGAAGGACTTGAGTTGTTTACAAGCCCTGCACTGAGGCAGATTGGTGCTGTTCGCAGAGTAGGCCTTTGCCCGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR GCA 90 bp CCTGTCATTCACAGCCATGGGGTGAGAGGGAACCGGAGGAGAGGGTaGCAACCAAGGGGGTCTGGAAGGTGGGTGGGAGGGTATGTGTTA +
Preference number: 1 (lower is better)
Translates to: PVIHSHGVRGNRRRG*QPRGSGRWVGGYVL
Trigger: TAACACATACCCTCCCACCCACCTTCCAGACCCCCTTGGTTGGCACCCTCTCCTCCGGTTCCCTCTCACCCCATGGCTGTGAATGACAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR CCA 90 bp GAGAGTGAAGGGCACTGTGGCTCCCATCCCTTTCTCCCATGTCCATaGTTGCTGTGCGCAGAGACAGGGCCTTGGAGGGATGAGCTGGAG +
Preference number: 1 (lower is better)
Translates to: ESEGHCGSHPFLPCP*LLCAETGPWRDELE
Trigger: CTCCAGCTCATCCCTCCAAGGCCCTGTCTCTGCGCACAGCAACCATGGACATGGGAGAAAGGGATGGGAGCCACAGTGCCCTTCACTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR TCA 90 bp TCCGTGGGTGGGGGCCATGGGTGCCATCTATCCTCAGGGATTTGGTaGGTCCAGATCTCACTCCTGTCTTTCCACACAGGCTGCTCGACT +
Preference number: 1 (lower is better)
Translates to: SVGGGHGCHLSSGIW*VQISLLSFHTGCST
Trigger: AGTCGAGCAGCCTGTGTGGAAAGACAGGAGTGAGATCTGGACTCACCAAATCCCTGAGGATAGATGGCACCCATGGCCCCCACCCACGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR GCA 90 bp CCTGACACAACTTGTGAGTTGACGGTTGTCATGGCGATGTTGCCCTaGTGGAGCGCTGAGGCTGGGACCACAATCCCCTGGGGGTTATTG +
Preference number: 1 (lower is better)
Translates to: PDTTCELTVVMAMLP*WSAEAGTTIPWGLL
Trigger: CAATAACCCCCAGGGGATTGTGGTCCCAGCCTCAGCGCTCCAGCAGGGCAACATCGCCATGACAACCGTCAACTCACAAGTTGTGTCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532623.5
3UTR CCA 90 bp CCCTTTCTCCCATGTCCATGGTTGCTGTGCGCAGAGACAGGGCCTTaGAGGGATGAGCTGGAGCCTGGTGGATTCCATCCCATTCTGATC +
Preference number: 1 (lower is better)
Translates to: PFLPCPWLLCAETGP*RDELEPGGFHPILI
Trigger: GATCAGAATGGGATGGAATCCACCAGGCTCCAGCTCATCCCTCCAAGGCCCTGTCTCTGCGCACAGCAACCATGGACATGGGAGAAAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR CCA 90 bp TGTGCCAGTGTGTCCGTGCTGGGGGACGCCTGTCCAGGTGGTGAGTaGAACGGTGTGTGTGTGTGTCTGTGTGCGCGTGTTAACAAGAAA +
Preference number: 1 (lower is better)
Translates to: CASVSVLGDACPGGE*NGVCVCLCARVNKK
Trigger: TTTCTTGTTAACACGCGCACACAGACACACACACACACCGTTCCACTCACCACCTGGACAGGCGTCCCCCAGCACGGACACACTGGCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR CCA 90 bp GACACAACTTGTGAGTTGACGGTTGTCATGGCGATGTTGCCCTGCTaGAGCGCTGAGGCTGGGACCACAATCCCCTGGGGGTTATTGGAG +
Preference number: 1 (lower is better)
Translates to: DTTCELTVVMAMLPC*SAEAGTTIPWGLLE
Trigger: CTCCAATAACCCCCAGGGGATTGTGGTCCCAGCCTCAGCGCTCCAGCAGGGCAACATCGCCATGACAACCGTCAACTCACAAGTTGTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532623.5
3UTR TCA 90 bp CCCATGTCCATGGTTGCTGTGCGCAGAGACAGGGCCTTGGAGGGATaGGCTGGAGCCTGGTGGATTCCATCCCATTCTGATCTGCAAGAT +
Preference number: 1 (lower is better)
Translates to: PMSMVAVRRDRALEG*AGAWWIPSHSDLQD
Trigger: ATCTTGCAGATCAGAATGGGATGGAATCCACCAGGCTCCAGCTCATCCCTCCAAGGCCCTGTCTCTGCGCACAGCAACCATGGACATGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR TCA 90 bp TTCTGGATCTGGATGGCTCCCTGGGGGATTGCTTGGGTGACCACCTaGCCCTGGGAGGTTACCATGGTAACCGGTTGGTATAAGGCTCCA +
Preference number: 1 (lower is better)
Translates to: FWIWMAPWGIAWVTT*PWEVTMVTGWYKAP
Trigger: TGGAGCCTTATACCAACCGGTTACCATGGTAACCTCCCAGGGTCAGGTGGTCACCCAAGCAATCCCCCAGGGAGCCATCCAGATCCAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532623.5
3UTR TCA 90 bp CGATGGAGTTGGGCCAGAATCTTTGGGTGGGCCGGTGCTGAGACTTaGTCTTCTTGGCTTTGGGGGCAGGATCTGGGTTGCTGGCATCAA +
Preference number: 1 (lower is better)
Translates to: RWSWARIFGWAGAET*SSWLWGQDLGCWHQ
Trigger: TTGATGCCAGCAACCCAGATCCTGCCCCCAAAGCCAAGAAGATCAAGTCTCAGCACCGGCCCACCCAAAGATTCTGGCCCAACTCCATCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532623.5
3UTR GCA 90 bp AAGTCTGCCCCCGGGCAAAGGCCTACTCTGCGAACAGCACCAATCTaGCTCAGTGCAGGGCTTGTAAACAACTCAAGTCCTTCCGTGGGT +
Preference number: 1 (lower is better)
Translates to: KSAPGQRPTLRTAPI*LSAGLVNNSSPSVG
Trigger: ACCCACGGAAGGACTTGAGTTGTTTACAAGCCCTGCACTGAGGCAGATTGGTGCTGTTCGCAGAGTAGGCCTTTGCCCGGGGGCAGACTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR GCA 90 bp AAGGTTAACCTGTGTGTTCTGGATCTGGATGGCTCCCTGGGGGATTaGTTGGGTGACCACCTGACCCTGGGAGGTTACCATGGTAACCGG +
Preference number: 1 (lower is better)
Translates to: KVNLCVLDLDGSLGD*LGDHLTLGGYHGNR
Trigger: CCGGTTACCATGGTAACCTCCCAGGGTCAGGTGGTCACCCAAGCAATCCCCCAGGGAGCCATCCAGATCCAGAACACACAGGTTAACCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532623.5
3UTR GCA 90 bp TCTTCTGTCCCATCCAATGAGTCATCGTGTGCAGCCATCATAGCCTaGTGCATGGCCATGGTGGCACTGTCTGAGGACAGGGACTGCAGG +
Preference number: 1 (lower is better)
Translates to: SSVPSNESSCAAIIA*CMAMVALSEDRDCR
Trigger: CCTGCAGTCCCTGTCCTCAGACAGTGCCACCATGGCCATGCAGCAGGCTATGATGGCTGCACACGATGACTCATTGGATGGGACAGAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532623.5
3UTR CCA 90 bp CATTCTGATCTGCAAGATGTGATGCCTCAGGCCCTCCCACTCCTCTaGCCACTGGTTATGCTTTGGGGCTCCCTCCTGCCCTTGAATGTC +
Preference number: 1 (lower is better)
Translates to: HSDLQDVMPQALPLL*PLVMLWGSLLPLNV
Trigger: GACATTCAAGGGCAGGAGGGAGCCCCAAAGCATAACCAGTGGCCAGAGGAGTGGGAGGGCCTGAGGCATCACATCTTGCAGATCAGAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR TCA 90 bp CCACAGGTTGAGCCCACCAGCTTACAGTTGGTTTCCAGGAGAGAGTaGAGGGCACTGTGGCTCCCATCCCTTTCTCCCATGTCCATGGTT +
Preference number: 1 (lower is better)
Translates to: PQVEPTSLQLVSRRE*RALWLPSLSPMSMV
Trigger: AACCATGGACATGGGAGAAAGGGATGGGAGCCACAGTGCCCTTCACTCTCTCCTGGAAACCAACTGTAAGCTGGTGGGCTCAACCTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR CCA 90 bp GGACTCCTCTTAACCTCCCACAGGTTGAGCCCACCAGCTTACAGTTaGTTTCCAGGAGAGAGTGAAGGGCACTGTGGCTCCCATCCCTTT +
Preference number: 1 (lower is better)
Translates to: GLLLTSHRLSPPAYS*FPGESEGHCGSHPF
Trigger: AAAGGGATGGGAGCCACAGTGCCCTTCACTCTCTCCTGGAAACCAACTGTAAGCTGGTGGGCTCAACCTGTGGGAGGTTAAGAGGAGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR CCA 90 bp AAAGTCACCTCCATATGGTTCCTAGCCCAGGGTCTGCCATCTCCTTaGCTCTTGGAGTCAACCCAGAAGGGACTCCTCTTAACCTCCCAC +
Preference number: 1 (lower is better)
Translates to: KVTSIWFLAQGLPSP*LLESTQKGLLLTSH
Trigger: GTGGGAGGTTAAGAGGAGTCCCTTCTGGGTTGACTCCAAGAGCCAAGGAGATGGCAGACCCTGGGCTAGGAACCATATGGAGGTGACTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR TCA 90 bp CACTCCTCTGGCCACTGGTTATGCTTTGGGGCTCCCTCCTGCCCTTaGATGTCTGTCAAAGGAGCTGAGAAACTTCTGGGGATGAAACTC +
Preference number: 1 (lower is better)
Translates to: HSSGHWLCFGAPSCP*MSVKGAEKLLGMKL
Trigger: GAGTTTCATCCCCAGAAGTTTCTCAGCTCCTTTGACAGACATTCAAGGGCAGGAGGGAGCCCCAAAGCATAACCAGTGGCCAGAGGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR GCA 90 bp TCCAGTTCTGGGTCATCGCTGAAGAAGGGTTTGTGCTCCTGTTCCTaGTGGTGGACAAAGTTCTCGATGTCCACATCAAAGCTGGCGGAG +
Preference number: 1 (lower is better)
Translates to: SSSGSSLKKGLCSCS*WWTKFSMSTSKLAE
Trigger: CTCCGCCAGCTTTGATGTGGACATCGAGAACTTTGTCCACCAGCAGGAACAGGAGCACAAACCCTTCTTCAGCGATGACCCAGAACTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532623.5
3UTR CCA 90 bp TCTGGGTCATCGCTGAAGAAGGGTTTGTGCTCCTGTTCCTGCTGGTaGACAAAGTTCTCGATGTCCACATCAAAGCTGGCGGAGGTGATG +
Preference number: 1 (lower is better)
Translates to: SGSSLKKGLCSCSCW*TKFSMSTSKLAEVM
Trigger: CATCACCTCCGCCAGCTTTGATGTGGACATCGAGAACTTTGTCCACCAGCAGGAACAGGAGCACAAACCCTTCTTCAGCGATGACCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532623.5
3UTR CCA 90 bp AGTTCTGGGTCATCGCTGAAGAAGGGTTTGTGCTCCTGTTCCTGCTaGTGGACAAAGTTCTCGATGTCCACATCAAAGCTGGCGGAGGTG +
Preference number: 1 (lower is better)
Translates to: SSGSSLKKGLCSCSC*WTKFSMSTSKLAEV
Trigger: CACCTCCGCCAGCTTTGATGTGGACATCGAGAACTTTGTCCACCAGCAGGAACAGGAGCACAAACCCTTCTTCAGCGATGACCCAGAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532623.5
3UTR-3UTR CCA 90 bp GTGTGGGATGGGCATCCCCGCAGGCTCTTGGGTGCCATTCTCTGGGCCCTCCCCCTGGGAGCAAAGGGATaGCCGTGGCGACCTGCGGGC +
Preference number: 2 (lower is better)
Translates to: VWDGHPRRLLGAILWALPLGAKG*PWRPAG
Trigger: GCCCGCAGGTCGCCACGGCCATCCCTTTGCTCCCAG...GGGGAGGGCCCAGAGAATGGCACCCAAGAGCCTGCGGGGATGCCCATCCCACAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR-3UTR CCA 90 bp TGTGTGGGATGGGCATCCCCGCAGGCTCTTGGGTGCCATTCTCTGGGCCCTCCCCACAGGCTGCTCGACTaGCCCCGCCAAACAGAGTCC +
Preference number: 2 (lower is better)
Translates to: CVGWASPQALGCHSLGPPHRLLD*PRQTES
Trigger: GGACTCTGTTTGGCGGGGCCAGTCGAGCAGCCTGTG...GGGAGGGCCCAGAGAATGGCACCCAAGAGCCTGCGGGGATGCCCATCCCACACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR-3UTR CCA 90 bp GTGTGGGATGGGCATCCCCGCAGGCTCTTGGGTGCCATTCTCTGGGCCCTCCCCAAGTCCTTCCGTGGGTaGGGGCCATGGGTGCCATCT +
Preference number: 2 (lower is better)
Translates to: VWDGHPRRLLGAILWALPKSFRG*GPWVPS
Trigger: AGATGGCACCCATGGCCCCCACCCACGGAAGGACTT...GGGGAGGGCCCAGAGAATGGCACCCAAGAGCCTGCGGGGATGCCCATCCCACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR-3UTR GCA 90 bp TGGGATGGGCATCCCCGCAGGCTCTTGGGTGCCATTCTCTGGGCCCTCCCCCACTCTTTCCACACAGGCTaGTCGACTGGCCCCGCCAAA +
Preference number: 2 (lower is better)
Translates to: WDGHPRRLLGAILWALPHSFHTG*STGPAK
Trigger: TTTGGCGGGGCCAGTCGAGCAGCCTGTGTGGAAAGA...GTGGGGGAGGGCCCAGAGAATGGCACCCAAGAGCCTGCGGGGATGCCCATCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR-3UTR CCA 90 bp TGGGATGGGCATCCCCGCAGGCTCTTGGGTGCCATTCTCTGGGCCCTCCCCCACGGTCTATGGAGGGCGTaGAGCACTGAAGGTGGGAAC +
Preference number: 2 (lower is better)
Translates to: WDGHPRRLLGAILWALPHGLWRA*STEGGN
Trigger: GTTCCCACCTTCAGTGCTCCACGCCCTCCATAGACC...GTGGGGGAGGGCCCAGAGAATGGCACCCAAGAGCCTGCGGGGATGCCCATCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR-3UTR CCA 90 bp CTGGGGGACGCCTGTCCAGGTGGTGAGTGGAACGGTGTGTGTGTGTGTCTGTGTGCTGGGTGGGGTGTGTaGGATGGGCATCCCCGCAGG +
Preference number: 2 (lower is better)
Translates to: LGDACPGGEWNGVCVCLCAGWGV*DGHPRR
Trigger: CCTGCGGGGATGCCCATCCCACACACCCCACCCAGC...ACACAGACACACACACACACCGTTCCACTCACCACCTGGACAGGCGTCCCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR-3UTR TCA 90 bp TGCAGCACCCCCGCAGCGATGGAGTTGGGCCAGAATCTTTGGGTGGGCCGGTGCTCCTCTCCTGCTCAGTaGTCAGTGCCATCTGGGCTG +
Preference number: 2 (lower is better)
Translates to: CSTPAAMELGQNLWVGRCSSPAQ*SVPSGL
Trigger: CAGCCCAGATGGCACTGATCACTGAGCAGGAGAGGA...GCACCGGCCCACCCAAAGATTCTGGCCCAACTCCATCGCTGCGGGGGTGCTGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532623.5
3UTR-3UTR TCA 90 bp GTGTGTCCGTGCTGGGGGACGCCTGTCCAGGTGGTGAGTGGAACGGTGTGTGTGGGCTGGGGTCCTCATTaGAGCTCGGTGGTTGGGAAG +
Preference number: 2 (lower is better)
Translates to: VCPCWGTPVQVVSGTVCVGWGPH*SSVVGK
Trigger: CTTCCCAACCACCGAGCTTCAATGAGGACCCCAGCC...CACACACACCGTTCCACTCACCACCTGGACAGGCGTCCCCCAGCACGGACACAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR-3UTR TCA 90 bp GTGTGTCCGTGCTGGGGGACGCCTGTCCAGGTGGTGAGTGGAACGGTGTGTGTGGAGGGCGTGGAGCACTaGAGGTGGGAACATCTAGGG +
Preference number: 2 (lower is better)
Translates to: VCPCWGTPVQVVSGTVCVEGVEH*RWEHLG
Trigger: CCCTAGATGTTCCCACCTTCAGTGCTCCACGCCCTC...CACACACACCGTTCCACTCACCACCTGGACAGGCGTCCCCCAGCACGGACACAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR-3UTR GCA 90 bp GTGTGGGATGGGCATCCCCGCAGGCTCTTGGGTGCCATTCTCTGGGCCCTCCCCGCGACACTCCTCTCCTaGTCAGTGATCAGTGCCATC +
Preference number: 2 (lower is better)
Translates to: VWDGHPRRLLGAILWALPATLLS*SVISAI
Trigger: GATGGCACTGATCACTGAGCAGGAGAGGAGTGTCGC...GGGGAGGGCCCAGAGAATGGCACCCAAGAGCCTGCGGGGATGCCCATCCCACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR-3UTR GCA 90 bp TGCAGCACCCCCGCAGCGATGGAGTTGGGCCAGAATCTTTGGGTGGGCCGGTGCGGGCAGGATCTGGGTTaGTGGCATCAAGCATGGGCT +
Preference number: 2 (lower is better)
Translates to: CSTPAAMELGQNLWVGRCGQDLG*WHQAWA
Trigger: AGCCCATGCTTGATGCCAGCAACCCAGATCCTGCCC...GCACCGGCCCACCCAAAGATTCTGGCCCAACTCCATCGCTGCGGGGGTGCTGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532623.5
3UTR-3UTR CCA 90 bp CCATGGGGTGAGAGGGAACCGGAGGAGAGGGTGCCAACCAAGGGGGTCTGGAAGGCAGAGACAGGGCCTTaGAGGGATGAGCTGGAGCCT +
Preference number: 2 (lower is better)
Translates to: PWGEREPEERVPTKGVWKAETGP*RDELEP
Trigger: AGGCTCCAGCTCATCCCTCCAAGGCCCTGTCTCTGC...CTTCCAGACCCCCTTGGTTGGCACCCTCTCCTCCGGTTCCCTCTCACCCCATGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR-3UTR CCA 90 bp GTGTGTCCGTGCTGGGGGACGCCTGTCCAGGTGGTGAGTGGAACGGTGTGTGTGCTGATGGAGCCAGGCTaGGAGCAAAGGGATGGCCGT +
Preference number: 2 (lower is better)
Translates to: VCPCWGTPVQVVSGTVCVLMEPG*EQRDGR
Trigger: ACGGCCATCCCTTTGCTCCCAGCCTGGCTCCATCAG...CACACACACCGTTCCACTCACCACCTGGACAGGCGTCCCCCAGCACGGACACAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR CAA 90 bp CTGCTGCTGCAGCACCCCCGCAGCGATGGAGTTGGGCCAGAATCTTaGGGTGGGCCGGTGCTGAGACTTGATCTTCTTGGCTTTGGGGGC +
Preference number: 2 (lower is better)
Translates to: LLLQHPRSDGVGPES*GGPVLRLDLLGFGG
Trigger: GCCCCCAAAGCCAAGAAGATCAAGTCTCAGCACCGGCCCACCCAAAGATTCTGGCCCAACTCCATCGCTGCGGGGGTGCTGCAGCAGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000532623.5
3UTR-3UTR TCA 90 bp GATGGGCATCCCCGCAGGCTCTTGGGTGCCATTCTCTGGGCCCTCCCCCACATTTCCTCTCCTGCTCAGTaGTCAGTGCCATCTGGGCTG +
Preference number: 2 (lower is better)
Translates to: DGHPRRLLGAILWALPHISSPAQ*SVPSGL
Trigger: CAGCCCAGATGGCACTGATCACTGAGCAGGAGAGGA...AATGTGGGGGAGGGCCCAGAGAATGGCACCCAAGAGCCTGCGGGGATGCCCATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR-3UTR TCA 90 bp TGTGTGGGATGGGCATCCCCGCAGGCTCTTGGGTGCCATTCTCTGGGCCCTCCCGCTCCCTCCTGCCCTTaGATGTCTGTCAAAGGAGCT +
Preference number: 2 (lower is better)
Translates to: CVGWASPQALGCHSLGPPAPSCP*MSVKGA
Trigger: AGCTCCTTTGACAGACATTCAAGGGCAGGAGGGAGC...GGGAGGGCCCAGAGAATGGCACCCAAGAGCCTGCGGGGATGCCCATCCCACACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR-3UTR TCA 90 bp GTGTGTCCGTGCTGGGGGACGCCTGTCCAGGTGGTGAGTGGAACGGTGTGTGTGGTTTCCAGGAGAGAGTaGAGGGCACTGTGGCTCCCA +
Preference number: 2 (lower is better)
Translates to: VCPCWGTPVQVVSGTVCVVSRRE*RALWLP
Trigger: TGGGAGCCACAGTGCCCTTCACTCTCTCCTGGAAAC...CACACACACCGTTCCACTCACCACCTGGACAGGCGTCCCCCAGCACGGACACAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR-3UTR TCA 90 bp TGGGATGGGCATCCCCGCAGGCTCTTGGGTGCCATTCTCTGGGCCCTCCCCCACTGGTTTCACCTTCTCTaGAGGTCTATGGAGGGCGTG +
Preference number: 2 (lower is better)
Translates to: WDGHPRRLLGAILWALPHWFHLL*RSMEGV
Trigger: CACGCCCTCCATAGACCTTCAGAGAAGGTGAAACCA...GTGGGGGAGGGCCCAGAGAATGGCACCCAAGAGCCTGCGGGGATGCCCATCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR-3UTR TCA 90 bp GAGTTGACGGTTGTCATGGCGATGTTGCCCTGCTGGAGCGCTGAGGCTGGGACCCCTGTGAGTGAAGGTTaGTGGAGGGCTGGTTGGGGG +
Preference number: 2 (lower is better)
Translates to: ELTVVMAMLPCWSAEAGTPVSEG*WRAGWG
Trigger: CCCCCAACCAGCCCTCCATCAACCTTCACTCACAGG...GGTCCCAGCCTCAGCGCTCCAGCAGGGCAACATCGCCATGACAACCGTCAACTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532623.5
3UTR-3UTR GCA 90 bp TGCAGCACCCCCGCAGCGATGGAGTTGGGCCAGAATCTTTGGGTGGGCCGGTGCGCGACACTCCTCTCCTaGTCAGTGATCAGTGCCATC +
Preference number: 2 (lower is better)
Translates to: CSTPAAMELGQNLWVGRCATLLS*SVISAI
Trigger: GATGGCACTGATCACTGAGCAGGAGAGGAGTGTCGC...GCACCGGCCCACCCAAAGATTCTGGCCCAACTCCATCGCTGCGGGGGTGCTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532623.5
3UTR-3UTR CCA 90 bp GGGTCCCCTCCAGTTGAGCCAGGTAGCCACTCACATCCTGCCACTGAAGGAGGTGCAAAGGGATGGCCGTaGCGACCTGCGGGCTGGAAA +
Preference number: 2 (lower is better)
Translates to: GSPPVEPGSHSHPATEGGAKGWP*RPAGWK
Trigger: TTTCCAGCCCGCAGGTCGCCACGGCCATCCCTTTGC...ACCTCCTTCAGTGGCAGGATGTGAGTGGCTACCTGGCTCAACTGGAGGGGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR-3UTR CCA 90 bp GGGTCCCCTCCAGTTGAGCCAGGTAGCCACTCACATCCTGCCACTGAAGGAGGTGTGGGGTGTGTGGGATaGGCATCCCCGCAGGCTCTT +
Preference number: 2 (lower is better)
Translates to: GSPPVEPGSHSHPATEGGVGCVG*ASPQAL
Trigger: AAGAGCCTGCGGGGATGCCCATCCCACACACCCCAC...ACCTCCTTCAGTGGCAGGATGTGAGTGGCTACCTGGCTCAACTGGAGGGGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR CAA 90 bp GCTCCACCTGACACAACTTGTGAGTTGACGGTTGTCATGGCGATGTaGCCCTGCTGGAGCGCTGAGGCTGGGACCACAATCCCCTGGGGG +
Preference number: 2 (lower is better)
Translates to: APPDTTCELTVVMAM*PCWSAEAGTTIPWG
Trigger: CCCCCAGGGGATTGTGGTCCCAGCCTCAGCGCTCCAGCAGGGCAACATCGCCATGACAACCGTCAACTCACAAGTTGTGTCAGGTGGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532623.5
3UTR-3UTR GCA 90 bp GGGTCCCCTCCAGTTGAGCCAGGTAGCCACTCACATCCTGCCACTGAAGGAGGTAACCGGAGGAGAGGGTaGCAACCAAGGGGGTCTGGA +
Preference number: 2 (lower is better)
Translates to: GSPPVEPGSHSHPATEGGNRRRG*QPRGSG
Trigger: TCCAGACCCCCTTGGTTGGCACCCTCTCCTCCGGTT...ACCTCCTTCAGTGGCAGGATGTGAGTGGCTACCTGGCTCAACTGGAGGGGACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR-3UTR GCA 90 bp CTGTGTTCCAAGCCCAGGTCGCTGACATTTGTCGTCTGCAGCTCGTCGACCTCCATGGCGATGTTGCCCTaGTGGAGCGCTGAGGCTGGG +
Preference number: 2 (lower is better)
Translates to: LCSKPRSLTFVVCSSSTSMAMLP*WSAEAG
Trigger: CCCAGCCTCAGCGCTCCAGCAGGGCAACATCGCCAT...GGAGGTCGACGAGCTGCAGACGACAAATGTCAGCGACCTGGGCTTGGAACACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532623.5
3UTR-3UTR CCA 90 bp GTGTGTCCGTGCTGGGGGACGCCTGTCCAGGTGGTGAGTGGAACGGTGTGTGTGGGTCTGCCATCTCCTTaGCTCTTGGAGTCAACCCAG +
Preference number: 2 (lower is better)
Translates to: VCPCWGTPVQVVSGTVCVGLPSP*LLESTQ
Trigger: CTGGGTTGACTCCAAGAGCCAAGGAGATGGCAGACC...CACACACACCGTTCCACTCACCACCTGGACAGGCGTCCCCCAGCACGGACACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR-3UTR CCA 90 bp CAGCCATGGGGTGAGAGGGAACCGGAGGAGAGGGTGCCAACCAAGGGGGTCTGGACCTTCTCCAACCCCTaGCTTCCCACTGGACTAGAT +
Preference number: 2 (lower is better)
Translates to: QPWGEREPEERVPTKGVWTFSNP*LPTGLD
Trigger: ATCTAGTCCAGTGGGAAGCCAGGGGTTGGAGAAGGT...CCAGACCCCCTTGGTTGGCACCCTCTCCTCCGGTTCCCTCTCACCCCATGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR-3UTR CCA 90 bp GGGGGCAGGATCTGGGTTGCTGGCATCAAGCATGGGCTGCAGGATGCGCCTCCGTCCCCTGGGGGTTATTaGAGACTCCGGACATGGAAT +
Preference number: 2 (lower is better)
Translates to: GGRIWVAGIKHGLQDAPPSPGGY*RLRTWN
Trigger: ATTCCATGTCCGGAGTCTCCAATAACCCCCAGGGGA...CGGAGGCGCATCCTGCAGCCCATGCTTGATGCCAGCAACCCAGATCCTGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000532623.5
3UTR CAA 90 bp AGTGAAGGGCACTGTGGCTCCCATCCCTTTCTCCCATGTCCATGGTaGCTGTGCGCAGAGACAGGGCCTTGGAGGGATGAGCTGGAGCCT +
Preference number: 2 (lower is better)
Translates to: SEGHCGSHPFLPCPW*LCAETGPWRDELEP
Trigger: AGGCTCCAGCTCATCCCTCCAAGGCCCTGTCTCTGCGCACAGCAACCATGGACATGGGAGAAAGGGATGGGAGCCACAGTGCCCTTCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR-3UTR TCA 90 bp GTGTGTCCGTGCTGGGGGACGCCTGTCCAGGTGGTGAGTGGAACGGTGTGTGTGTCCTCAGGGATTTGGTaGGTCCAGATCTCACTCCTG +
Preference number: 2 (lower is better)
Translates to: VCPCWGTPVQVVSGTVCVSSGIW*VQISLL
Trigger: CAGGAGTGAGATCTGGACTCACCAAATCCCTGAGGA...CACACACACCGTTCCACTCACCACCTGGACAGGCGTCCCCCAGCACGGACACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR-3UTR TCA 90 bp AGGTTGTCCAAGTTGATGGAACCATCGGGGTTTGTCCCTGGGGCACCGCCCTGCCTGCAGGAGGTCCTGTaGGTGAAGGTTGATGGAGGG +
Preference number: 2 (lower is better)
Translates to: RLSKLMEPSGFVPGAPPCLQEVL*VKVDGG
Trigger: CCCTCCATCAACCTTCACTCACAGGACCTCCTGCAG...GCAGGGCGGTGCCCCAGGGACAAACCCCGATGGTTCCATCAACTTGGACAACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532623.5
3UTR-3UTR TCA 90 bp AAGGTTAACCTGTGTGTTCTGGATCTGGATGGCTCCCTGGGGGATTGCTTGGGTGCCCTGCTGGAGCGCTaGGGCTGGGACCACAATCCC +
Preference number: 2 (lower is better)
Translates to: KVNLCVLDLDGSLGDCLGALLER*GWDHNP
Trigger: GGGATTGTGGTCCCAGCCTCAGCGCTCCAGCAGGGC...ACCCAAGCAATCCCCCAGGGAGCCATCCAGATCCAGAACACACAGGTTAACCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532623.5
3UTR-3UTR TCA 90 bp AGGTTGTCCAAGTTGATGGAACCATCGGGGTTTGTCCCTGGGGCACCGCCCTGCTGGGTGGGCCGGTGCTaGGACTTGATCTTCTTGGCT +
Preference number: 2 (lower is better)
Translates to: RLSKLMEPSGFVPGAPPCWVGRC*DLIFLA
Trigger: AGCCAAGAAGATCAAGTCTCAGCACCGGCCCACCCA...GCAGGGCGGTGCCCCAGGGACAAACCCCGATGGTTCCATCAACTTGGACAACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532623.5
3UTR-3UTR GCA 90 bp GGGTCCCCTCCAGTTGAGCCAGGTAGCCACTCACATCCTGCCACTGAAGGAGGTTCTGGCCACTGGTTATaGTTTGGGGCTCCCTCCTGC +
Preference number: 2 (lower is better)
Translates to: GSPPVEPGSHSHPATEGGSGHWL*FGAPSC
Trigger: GCAGGAGGGAGCCCCAAAGCATAACCAGTGGCCAGA...ACCTCCTTCAGTGGCAGGATGTGAGTGGCTACCTGGCTCAACTGGAGGGGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR-3UTR CCA 90 bp CAGCCATGGGGTGAGAGGGAACCGGAGGAGAGGGTGCCAACCAAGGGGGTCTGGCTCATTGAAGCTCGGTaGTTGGGAAGGAACAGGTGT +
Preference number: 2 (lower is better)
Translates to: QPWGEREPEERVPTKGVWLIEAR*LGRNRC
Trigger: ACACCTGTTCCTTCCCAACCACCGAGCTTCAATGAG...CCAGACCCCCTTGGTTGGCACCCTCTCCTCCGGTTCCCTCTCACCCCATGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR-3UTR CCA 90 bp GGGTCCCCTCCAGTTGAGCCAGGTAGCCACTCACATCCTGCCACTGAAGGAGGTCCACTGGTTATGCTTTaGGGCTCCCTCCTGCCCTTG +
Preference number: 2 (lower is better)
Translates to: GSPPVEPGSHSHPATEGGPLVML*GSLLPL
Trigger: CAAGGGCAGGAGGGAGCCCCAAAGCATAACCAGTGG...ACCTCCTTCAGTGGCAGGATGTGAGTGGCTACCTGGCTCAACTGGAGGGGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR-3UTR CCA 90 bp GGGTCCCCTCCAGTTGAGCCAGGTAGCCACTCACATCCTGCCACTGAAGGAGGTCACTCCTCTGGCCACTaGTTATGCTTTGGGGCTCCC +
Preference number: 2 (lower is better)
Translates to: GSPPVEPGSHSHPATEGGHSSGH*LCFGAP
Trigger: GGGAGCCCCAAAGCATAACCAGTGGCCAGAGGAGTG...ACCTCCTTCAGTGGCAGGATGTGAGTGGCTACCTGGCTCAACTGGAGGGGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR-3UTR CCA 90 bp TGCAGCACCCCCGCAGCGATGGAGTTGGGCCAGAATCTTTGGGTGGGCCGGTGCTTAACCTGTGTGTTCTaGATCTGGATGGCTCCCTGG +
Preference number: 2 (lower is better)
Translates to: CSTPAAMELGQNLWVGRCLTCVF*IWMAPW
Trigger: CCAGGGAGCCATCCAGATCCAGAACACACAGGTTAA...GCACCGGCCCACCCAAAGATTCTGGCCCAACTCCATCGCTGCGGGGGTGCTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532623.5
3UTR-3UTR TCA 90 bp AGGTTGTCCAAGTTGATGGAACCATCGGGGTTTGTCCCTGGGGCACCGCCCTGCCCCCTAGATCATTCCTaGGCAGGTTGTCGCTGTGCA +
Preference number: 2 (lower is better)
Translates to: RLSKLMEPSGFVPGAPPCPLDHS*AGCRCA
Trigger: TGCACAGCGACAACCTGCTCAGGAATGATCTAGGGG...GCAGGGCGGTGCCCCAGGGACAAACCCCGATGGTTCCATCAACTTGGACAACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000532623.5
3UTR-3UTR TCA 90 bp GGCTGGGACCACAATCCCCTGGGGGTTATTGGAGACTCCGGACATGGAATTGGGAGGAGGTCCTGTGAGTaGAGGTTGATGGAGGGCTGG +
Preference number: 2 (lower is better)
Translates to: GWDHNPLGVIGDSGHGIGRRSCE*RLMEGW
Trigger: CCAGCCCTCCATCAACCTTCACTCACAGGACCTCCT...CCCAATTCCATGTCCGGAGTCTCCAATAACCCCCAGGGGATTGTGGTCCCAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532623.5
3UTR-3UTR GCA 90 bp GGGTCCCCTCCAGTTGAGCCAGGTAGCCACTCACATCCTGCCACTGAAGGAGGTGGCAAAGGCCTACTCTaGGAACAGCACCAATCTGCC +
Preference number: 2 (lower is better)
Translates to: GSPPVEPGSHSHPATEGGGKGLL*EQHQSA
Trigger: GGCAGATTGGTGCTGTTCGCAGAGTAGGCCTTTGCC...ACCTCCTTCAGTGGCAGGATGTGAGTGGCTACCTGGCTCAACTGGAGGGGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR-3UTR GCA 90 bp CCATCCAATGAGTCATCGTGTGCAGCCATCATAGCCTGCTGCATGGCCATGGTGGGCTCCCTGGGGGATTaGTTGGGTGACCACCTGACC +
Preference number: 2 (lower is better)
Translates to: PSNESSCAAIIACCMAMVGSLGD*LGDHLT
Trigger: GGTCAGGTGGTCACCCAAGCAATCCCCCAGGGAGCC...CACCATGGCCATGCAGCAGGCTATGATGGCTGCACACGATGACTCATTGGATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532623.5
3UTR-3UTR CCA 90 bp GGGTCCCCTCCAGTTGAGCCAGGTAGCCACTCACATCCTGCCACTGAAGGAGGTCTTGGAGGGATGAGCTaGAGCCTGGTGGATTCCATC +
Preference number: 2 (lower is better)
Translates to: GSPPVEPGSHSHPATEGGLGGMS*SLVDSI
Trigger: GATGGAATCCACCAGGCTCCAGCTCATCCCTCCAAG...ACCTCCTTCAGTGGCAGGATGTGAGTGGCTACCTGGCTCAACTGGAGGGGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR-3UTR TCA 90 bp GATGGGCATCCCCGCAGGCTCTTGGGTGCCATTCTCTGGGCCCTCCCCCACATTGTCTGTCAAAGGAGCTaGGAAACTTCTGGGGATGAA +
Preference number: 2 (lower is better)
Translates to: DGHPRRLLGAILWALPHIVCQRS*ETSGDE
Trigger: TTCATCCCCAGAAGTTTCTCAGCTCCTTTGACAGAC...AATGTGGGGGAGGGCCCAGAGAATGGCACCCAAGAGCCTGCGGGGATGCCCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR-3UTR TCA 90 bp TCTTTGGGTGGGCCGGTGCTGAGACTTGATCTTCTTGGCTTTGGGGGCAGGATCTTACTTGCAGGAGGGTaGGGTTGGTCTGGGCTGCGA +
Preference number: 2 (lower is better)
Translates to: SLGGPVLRLDLLGFGGRILLAGG*GWSGLR
Trigger: TCGCAGCCCAGACCAACCTCACCCTCCTGCAAGTAA...GATCCTGCCCCCAAAGCCAAGAAGATCAAGTCTCAGCACCGGCCCACCCAAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532623.5
3UTR-3UTR GCA 90 bp GATGGGCATCCCCGCAGGCTCTTGGGTGCCATTCTCTGGGCCCTCCCCCACATTACCAATCTGCCTCAGTaGAGGGCTTGTAAACAACTC +
Preference number: 2 (lower is better)
Translates to: DGHPRRLLGAILWALPHITNLPQ*RACKQL
Trigger: GAGTTGTTTACAAGCCCTGCACTGAGGCAGATTGGT...AATGTGGGGGAGGGCCCAGAGAATGGCACCCAAGAGCCTGCGGGGATGCCCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR-3UTR GCA 90 bp CTGGGGGACGCCTGTCCAGGTGGTGAGTGGAACGGTGTGTGTGTGTGTCTGTGTCGAACAGCACCAATCTaGCTCAGTGCAGGGCTTGTA +
Preference number: 2 (lower is better)
Translates to: LGDACPGGEWNGVCVCLCRTAPI*LSAGLV
Trigger: TACAAGCCCTGCACTGAGGCAGATTGGTGCTGTTCG...ACACAGACACACACACACACCGTTCCACTCACCACCTGGACAGGCGTCCCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR-3UTR TCA 90 bp CCATGGGGTGAGAGGGAACCGGAGGAGAGGGTGCCAACCAAGGGGGTCTGGAAGCCACATTTAGGATATTaGTGGGAAGAGGGATGTAGC +
Preference number: 2 (lower is better)
Translates to: PWGEREPEERVPTKGVWKPHLGY*WEEGCS
Trigger: GCTACATCCCTCTTCCCATCAATATCCTAAATGTGG...CTTCCAGACCCCCTTGGTTGGCACCCTCTCCTCCGGTTCCCTCTCACCCCATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR-3UTR CCA 90 bp CTGTGTTCCAAGCCCAGGTCGCTGACATTTGTCGTCTGCAGCTCGTCGACCTCCATGCACTCAGAGCCCTaGGTGGCCTGTTCACATTTC +
Preference number: 2 (lower is better)
Translates to: LCSKPRSLTFVVCSSSTSMHSEP*VACSHF
Trigger: GAAATGTGAACAGGCCACCCAGGGCTCTGAGTGCAT...GGAGGTCGACGAGCTGCAGACGACAAATGTCAGCGACCTGGGCTTGGAACACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532623.5
3UTR-3UTR CCA 90 bp AGGTTGTCCAAGTTGATGGAACCATCGGGGTTTGTCCCTGGGGCACCGCCCTGCCAGATTGTCCAGTTCTaGGTCATCGCTGAAGAAGGG +
Preference number: 2 (lower is better)
Translates to: RLSKLMEPSGFVPGAPPCQIVQF*VIAEEG
Trigger: CCCTTCTTCAGCGATGACCCAGAACTGGACAATCTG...GCAGGGCGGTGCCCCAGGGACAAACCCCGATGGTTCCATCAACTTGGACAACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532623.5
3UTR CAA 90 bp ACCTCCATATGGTTCCTAGCCCAGGGTCTGCCATCTCCTTGGCTCTaGGAGTCAACCCAGAAGGGACTCCTCTTAACCTCCCACAGGTTG +
Preference number: 2 (lower is better)
Translates to: TSIWFLAQGLPSPWL*ESTQKGLLLTSHRL
Trigger: CAACCTGTGGGAGGTTAAGAGGAGTCCCTTCTGGGTTGACTCCAAGAGCCAAGGAGATGGCAGACCCTGGGCTAGGAACCATATGGAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR-3UTR CCA 90 bp TCAAGGTTAACCTGTGTGTTCTGGATCTGGATGGCTCCCTGGGGGATTGCTTGGGGGACCACAATCCCCTaGGGGTTATTGGAGACTCCG +
Preference number: 2 (lower is better)
Translates to: SRLTCVFWIWMAPWGIAWGTTIP*GLLETP
Trigger: CGGAGTCTCCAATAACCCCCAGGGGATTGTGGTCCC...CCAAGCAATCCCCCAGGGAGCCATCCAGATCCAGAACACACAGGTTAACCTTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000532623.5
3UTR CAA 90 bp CAAAGTCACCTCCATATGGTTCCTAGCCCAGGGTCTGCCATCTCCTaGGCTCTTGGAGTCAACCCAGAAGGGACTCCTCTTAACCTCCCA +
Preference number: 2 (lower is better)
Translates to: QSHLHMVPSPGSAIS*ALGVNPEGTPLNLP
Trigger: TGGGAGGTTAAGAGGAGTCCCTTCTGGGTTGACTCCAAGAGCCAAGGAGATGGCAGACCCTGGGCTAGGAACCATATGGAGGTGACTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR-3UTR GCA 90 bp TTCTGTGATCACCTAGGGACAGCTGTGGCCTCAAAGTCACCTCCATATGGTTCCTCCCATGTCCATGGTTaGTGTGCGCAGAGACAGGGC +
Preference number: 2 (lower is better)
Translates to: FCDHLGTAVASKSPPYGSSHVHG*CAQRQG
Trigger: GCCCTGTCTCTGCGCACAGCAACCATGGACATGGGA...GGAACCATATGGAGGTGACTTTGAGGCCACAGCTGTCCCTAGGTGATCACAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR-3UTR CCA 90 bp GGAGGTGAGGTCAAGGTTAACCTGTGTGTTCTGGATCTGGATGGCTCCCTGGGGTCCTGTTCCTGCTGGTaGACAAAGTTCTCGATGTCC +
Preference number: 2 (lower is better)
Translates to: GGEVKVNLCVLDLDGSLGSCSCW*TKFSMS
Trigger: GGACATCGAGAACTTTGTCCACCAGCAGGAACAGGA...CCCCAGGGAGCCATCCAGATCCAGAACACACAGGTTAACCTTGACCTCACCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532623.5
3UTR-3UTR CCA 90 bp GGCTGGGACCACAATCCCCTGGGGGTTATTGGAGACTCCGGACATGGAATTGGGTGGATTCTCAGGACCTaGATTGCCTTCACCATCAGA +
Preference number: 2 (lower is better)
Translates to: GWDHNPLGVIGDSGHGIGWILRT*IAFTIR
Trigger: TCTGATGGTGAAGGCAATCCAGGTCCTGAGAATCCA...CCCAATTCCATGTCCGGAGTCTCCAATAACCCCCAGGGGATTGTGGTCCCAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532623.5
3UTR-3UTR CCA 90 bp TCTTTGGGTGGGCCGGTGCTGAGACTTGATCTTCTTGGCTTTGGGGGCAGGATCGGGTGCATGAGATGCTaGAAGAGCCAAGAACGCATT +
Preference number: 2 (lower is better)
Translates to: SLGGPVLRLDLLGFGGRIGCMRC*KSQERI
Trigger: AATGCGTTCTTGGCTCTTCCAGCATCTCATGCACCC...GATCCTGCCCCCAAAGCCAAGAAGATCAAGTCTCAGCACCGGCCCACCCAAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532623.5
3UTR-3UTR CCA 90 bp CCATCCAATGAGTCATCGTGTGCAGCCATCATAGCCTGCTGCATGGCCATGGTGTTTGGGGGCAGGATCTaGGTTGCTGGCATCAAGCAT +
Preference number: 2 (lower is better)
Translates to: PSNESSCAAIIACCMAMVFGGRI*VAGIKH
Trigger: ATGCTTGATGCCAGCAACCCAGATCCTGCCCCCAAA...CACCATGGCCATGCAGCAGGCTATGATGGCTGCACACGATGACTCATTGGATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532623.5
3UTR-3UTR TCA 90 bp CTCAAAGTCACCTCCATATGGTTCCTAGCCCAGGGTCTGCCATCTCCTTGGCTCCTTTCTTCAAGCTACTaGTTTGGGGAAGCTAGGGCC +
Preference number: 2 (lower is better)
Translates to: LKVTSIWFLAQGLPSPWLLSSSY*FGEARA
Trigger: GGCCCTAGCTTCCCCAAATCAGTAGCTTGAAGAAAG...GAGCCAAGGAGATGGCAGACCCTGGGCTAGGAACCATATGGAGGTGACTTTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR-3UTR TCA 90 bp CCATCCAATGAGTCATCGTGTGCAGCCATCATAGCCTGCTGCATGGCCATGGTGCTTTCTTCAAGCTACTaGTTTGGGGAAGCTAGGGCC +
Preference number: 2 (lower is better)
Translates to: PSNESSCAAIIACCMAMVLSSSY*FGEARA
Trigger: GGCCCTAGCTTCCCCAAATCAGTAGCTTGAAGAAAG...CACCATGGCCATGCAGCAGGCTATGATGGCTGCACACGATGACTCATTGGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532623.5
3UTR-3UTR GCA 90 bp ATACATTCATTTCAGGGAGACCTCGGAAGAGTGACCATCCTTTTGCTCTACCCCATGGCCGTGGCGACCTaGGGGCTGGAAAGATTCCCA +
Preference number: 2 (lower is better)
Translates to: IHSFQGDLGRVTILLLYPMAVAT*GLERFP
Trigger: TGGGAATCTTTCCAGCCCGCAGGTCGCCACGGCCAT...GGGGTAGAGCAAAAGGATGGTCACTCTTCCGAGGTCTCCCTGAAATGAATGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR-3UTR GCA 90 bp GGGTCCCCTCCAGTTGAGCCAGGTAGCCACTCACATCCTGCCACTGAAGGAGGTTCCCACTGGACTAGATaGTTTCCAATGTTTCTTCTG +
Preference number: 2 (lower is better)
Translates to: GSPPVEPGSHSHPATEGGSHWTR*FPMFLL
Trigger: CAGAAGAAACATTGGAAAGCATCTAGTCCAGTGGGA...ACCTCCTTCAGTGGCAGGATGTGAGTGGCTACCTGGCTCAACTGGAGGGGACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR-3UTR GCA 90 bp CTGGGGGACGCCTGTCCAGGTGGTGAGTGGAACGGTGTGTGTGTGTGTCTGTGTTATCCCACTGCACATTaGAAAAGTCTCACGCCAAAA +
Preference number: 2 (lower is better)
Translates to: LGDACPGGEWNGVCVCLCYPTAH*KSLTPK
Trigger: TTTTGGCGTGAGACTTTTGCAATGTGCAGTGGGATA...ACACAGACACACACACACACCGTTCCACTCACCACCTGGACAGGCGTCCCCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR-3UTR GCA 90 bp TCAAGGTTAACCTGTGTGTTCTGGATCTGGATGGCTCCCTGGGGGATTGCTTGGCTGAAGAAGGGTTTGTaGTCCTGTTCCTGCTGGTGG +
Preference number: 2 (lower is better)
Translates to: SRLTCVFWIWMAPWGIAWLKKGL*SCSCWW
Trigger: CCACCAGCAGGAACAGGAGCACAAACCCTTCTTCAG...CCAAGCAATCCCCCAGGGAGCCATCCAGATCCAGAACACACAGGTTAACCTTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532623.5
3UTR-3UTR CCA 90 bp AAGGTTAACCTGTGTGTTCTGGATCTGGATGGCTCCCTGGGGGATTGCTTGGGTCTCCGGACATGGAATTaGGGGAATTCTGCAGGAGGT +
Preference number: 2 (lower is better)
Translates to: KVNLCVLDLDGSLGDCLGLRTWN*GNSAGG
Trigger: ACCTCCTGCAGAATTCCCCCAATTCCATGTCCGGAG...ACCCAAGCAATCCCCCAGGGAGCCATCCAGATCCAGAACACACAGGTTAACCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532623.5
3UTR-3UTR CCA 90 bp CCATCCAATGAGTCATCGTGTGCAGCCATCATAGCCTGCTGCATGGCCATGGTGACCATGGTAACCGGTTaGTATAAGGCTCCACCTGAC +
Preference number: 2 (lower is better)
Translates to: PSNESSCAAIIACCMAMVTMVTG*YKAPPD
Trigger: GTCAGGTGGAGCCTTATACCAACCGGTTACCATGGT...CACCATGGCCATGCAGCAGGCTATGATGGCTGCACACGATGACTCATTGGATGG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532623.5
3UTR-3UTR TCA 90 bp TGGCCACTGGTTATGCTTTGGGGCTCCCTCCTGCCCTTGAATGTCTGTCAAAGGAGAAACTTCTGGGGATaGAACTCAGTCCCCCTTTGT +
Preference number: 2 (lower is better)
Translates to: WPLVMLWGSLLPLNVCQRRNFWG*NSVPLC
Trigger: ACAAAGGGGGACTGAGTTTCATCCCCAGAAGTTTCT...CCTTTGACAGACATTCAAGGGCAGGAGGGAGCCCCAAAGCATAACCAGTGGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR-3UTR GCA 90 bp TCAAGGTTAACCTGTGTGTTCTGGATCTGGATGGCTCCCTGGGGGATTGCTTGGTTGTGCTCCTGTTCCTaGTGGTGGACAAAGTTCTCG +
Preference number: 2 (lower is better)
Translates to: SRLTCVFWIWMAPWGIAWLCSCS*WWTKFS
Trigger: CGAGAACTTTGTCCACCAGCAGGAACAGGAGCACAA...CCAAGCAATCCCCCAGGGAGCCATCCAGATCCAGAACACACAGGTTAACCTTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532623.5
3UTR-3UTR CCA 90 bp CTGAAGGTCTATGGAGGGCGTGGAGCACTGAAGGTGGGAACATCTAGGGTAAAACATCTCCTTGGCTCTTaGAGTCAACCCAGAAGGGAC +
Preference number: 2 (lower is better)
Translates to: LKVYGGRGALKVGTSRVKHLLGS*SQPRRD
Trigger: GTCCCTTCTGGGTTGACTCCAAGAGCCAAGGAGATG...TTTTACCCTAGATGTTCCCACCTTCAGTGCTCCACGCCCTCCATAGACCTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR-3UTR CCA 90 bp AAGGTTAACCTGTGTGTTCTGGATCTGGATGGCTCCCTGGGGGATTGCTTGGGTTGCTCCTGTTCCTGCTaGTGGACAAAGTTCTCGATG +
Preference number: 2 (lower is better)
Translates to: KVNLCVLDLDGSLGDCLGCSCSC*WTKFSM
Trigger: CATCGAGAACTTTGTCCACCAGCAGGAACAGGAGCA...ACCCAAGCAATCCCCCAGGGAGCCATCCAGATCCAGAACACACAGGTTAACCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532623.5
3UTR-3UTR TCA 90 bp TCCTCGTTTGTTCTTGGACTTCTTATCCTCATTGTCCAGGAGGGAGGTGAGGTCGTTCTGGGTCATCGCTaGAGAAGGGTTTGTGCTCCT +
Preference number: 2 (lower is better)
Translates to: SSFVLGLLILIVQEGGEVVLGHR*RRVCAP
Trigger: AGGAGCACAAACCCTTCTTCAGCGATGACCCAGAAC...GACCTCACCTCCCTCCTGGACAATGAGGATAAGAAGTCCAAGAACAAACGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532623.5
3UTR-3UTR TCA 90 bp TCAAGGTTAACCTGTGTGTTCTGGATCTGGATGGCTCCCTGGGGGATTGCTTGGACACAACTTGTGAGTTaGCGGTTGTCATGGCGATGT +
Preference number: 2 (lower is better)
Translates to: SRLTCVFWIWMAPWGIAWTQLVS*RLSWRC
Trigger: ACATCGCCATGACAACCGTCAACTCACAAGTTGTGT...CCAAGCAATCCCCCAGGGAGCCATCCAGATCCAGAACACACAGGTTAACCTTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532623.5
3UTR-3UTR GCA 90 bp GACTCCTCGTTTGTTCTTGGACTTCTTATCCTCATTGTCCAGGAGGGAGGTGAGAGCAGGTTGTCGCTGTaGATCTTGGTTTTGAGGCAG +
Preference number: 2 (lower is better)
Translates to: DSSFVLGLLILIVQEGGESRLSL*ILVLRQ
Trigger: CTGCCTCAAAACCAAGATGCACAGCGACAACCTGCT...CTCACCTCCCTCCTGGACAATGAGGATAAGAAGTCCAAGAACAAACGAGGAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532623.5
3UTR-3UTR CCA 90 bp ATACATTCATTTCAGGGAGACCTCGGAAGAGTGACCATCCTTTTGCTCTACCCCTTGAAGCTCGGTGGTTaGGAAGGAACAGGTGTCTCC +
Preference number: 2 (lower is better)
Translates to: IHSFQGDLGRVTILLLYPLKLGG*EGTGVS
Trigger: GGAGACACCTGTTCCTTCCCAACCACCGAGCTTCAA...GGGGTAGAGCAAAAGGATGGTCACTCTTCCGAGGTCTCCCTGAAATGAATGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR-3UTR CCA 90 bp GACTCCTCGTTTGTTCTTGGACTTCTTATCCTCATTGTCCAGGAGGGAGGTGAGTGGAGACTCCGGACATaGAATTGGGGGAATTCTGCA +
Preference number: 2 (lower is better)
Translates to: DSSFVLGLLILIVQEGGEWRLRT*NWGNSA
Trigger: TGCAGAATTCCCCCAATTCCATGTCCGGAGTCTCCA...CTCACCTCCCTCCTGGACAATGAGGATAAGAAGTCCAAGAACAAACGAGGAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532623.5
3UTR-3UTR GCA 90 bp GACTCCTCGTTTGTTCTTGGACTTCTTATCCTCATTGTCCAGGAGGGAGGTGAGTCTCAGGACCTGGATTaGCTTCACCATCAGATTGTC +
Preference number: 2 (lower is better)
Translates to: DSSFVLGLLILIVQEGGESQDLD*LHHQIV
Trigger: GACAATCTGATGGTGAAGGCAATCCAGGTCCTGAGA...CTCACCTCCCTCCTGGACAATGAGGATAAGAAGTCCAAGAACAAACGAGGAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532623.5
3UTR CAA 90 bp GTAATAAGATTTACTGAAAACGTCTCGGCCACATTCAGTACTGGTTaGGTGGATACATCAGAAGGAGGTTGCATAACATTAGGCAGGTGG +
Preference number: 2 (lower is better)
Translates to: VIRFTENVSATFSTG*VDTSEGGCITLGRW
Trigger: CCACCTGCCTAATGTTATGCAACCTCCTTCTGATGTATCCACCAAACCAGTACTGAATGTGGCCGAGACGTTTTCAGTAAATCTTATTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR GCA 72 bp CACAGCCATGGGGTGAGAGGGAACCGGAGGAGAGGGTaGCAACCAAGGGGGTCTGGAAGGTGGGTGGGAGGG +
Preference number: 3 (lower is better)
Translates to: HSHGVRGNRRRG*QPRGSGRWVGG
Trigger: CCCTCCCACCCACCTTCCAGACCCCCTTGGTTGGCACCCTCTCCTCCGGTTCCCTCTCACCCCATGGCTGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR GCA 72 bp CCCCACCCTGAAGGCCTCCCGGCGACACTCCTCTCCTaGTCAGTGATCAGTGCCATCTGGGCTGCCCGACTA +
Preference number: 3 (lower is better)
Translates to: PHPEGLPATLLS*SVISAIWAARL
Trigger: TAGTCGGGCAGCCCAGATGGCACTGATCACTGAGCAGGAGAGGAGTGTCGCCGGGAGGCCTTCAGGGTGGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532623.5
3UTR TCA 72 bp CAGTGTGTCCGTGCTGGGGGACGCCTGTCCAGGTGGTaGGTGGAACGGTGTGTGTGTGTGTCTGTGTGCGCG +
Preference number: 3 (lower is better)
Translates to: QCVRAGGRLSRW*VERCVCVSVCA
Trigger: CGCGCACACAGACACACACACACACCGTTCCACTCACCACCTGGACAGGCGTCCCCCAGCACGGACACACTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR TCA 72 bp CTGAAGGCCTCCCGGCGACACTCCTCTCCTGCTCAGTaGTCAGTGCCATCTGGGCTGCCCGACTACTCCAGG +
Preference number: 3 (lower is better)
Translates to: LKASRRHSSPAQ*SVPSGLPDYSR
Trigger: CCTGGAGTAGTCGGGCAGCCCAGATGGCACTGATCACTGAGCAGGAGAGGAGTGTCGCCGGGAGGCCTTCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532623.5
3UTR-3UTR CAA 90 bp CTGGGGGACGCCTGTCCAGGTGGTGAGTGGAACGGTGTGTGTGTGTGTCTGTGTCATCCCCGCAGGCTCTaGGGTGCCATTCTCTGGGCC +
Preference number: 3 (lower is better)
Translates to: LGDACPGGEWNGVCVCLCHPRRL*GAILWA
Trigger: GGCCCAGAGAATGGCACCCAAGAGCCTGCGGGGATG...ACACAGACACACACACACACCGTTCCACTCACCACCTGGACAGGCGTCCCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR-3UTR CAA 90 bp GTGTGGGATGGGCATCCCCGCAGGCTCTTGGGTGCCATTCTCTGGGCCCTCCCCATTGAAGCTCGGTGGTaGGGAAGGAACAGGTGTCTC +
Preference number: 3 (lower is better)
Translates to: VWDGHPRRLLGAILWALPIEARW*GRNRCL
Trigger: GAGACACCTGTTCCTTCCCAACCACCGAGCTTCAAT...GGGGAGGGCCCAGAGAATGGCACCCAAGAGCCTGCGGGGATGCCCATCCCACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR-3UTR CAA 90 bp TGCAGCACCCCCGCAGCGATGGAGTTGGGCCAGAATCTTTGGGTGGGCCGGTGCTCGCTGAAGAAGGGTTaGTGCTCCTGTTCCTGCTGG +
Preference number: 3 (lower is better)
Translates to: CSTPAAMELGQNLWVGRCSLKKG*CSCSCW
Trigger: CCAGCAGGAACAGGAGCACAAACCCTTCTTCAGCGA...GCACCGGCCCACCCAAAGATTCTGGCCCAACTCCATCGCTGCGGGGGTGCTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532623.5
3UTR CCA 72 bp CTGCAAGATGTGATGCCTCAGGCCCTCCCACTCCTCTaGCCACTGGTTATGCTTTGGGGCTCCCTCCTGCCC +
Preference number: 3 (lower is better)
Translates to: LQDVMPQALPLL*PLVMLWGSLLP
Trigger: GGGCAGGAGGGAGCCCCAAAGCATAACCAGTGGCCAGAGGAGTGGGAGGGCCTGAGGCATCACATCTTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR CCA 72 bp CGGAGGAGAGGGTGCCAACCAAGGGGGTCTGGAAGGTaGGTGGGAGGGTATGTGTTAGGGTGGACAGTGGAG +
Preference number: 3 (lower is better)
Translates to: RRRGCQPRGSGR*VGGYVLGWTVE
Trigger: CTCCACTGTCCACCCTAACACATACCCTCCCACCCACCTTCCAGACCCCCTTGGTTGGCACCCTCTCCTCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR CCA 72 bp AGGGAACCGGAGGAGAGGGTGCCAACCAAGGGGGTCTaGAAGGTGGGTGGGAGGGTATGTGTTAGGGTGGAC +
Preference number: 3 (lower is better)
Translates to: REPEERVPTKGV*KVGGRVCVRVD
Trigger: GTCCACCCTAACACATACCCTCCCACCCACCTTCCAGACCCCCTTGGTTGGCACCCTCTCCTCCGGTTCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR CCA 72 bp GTGTCCGTGCTGGGGGACGCCTGTCCAGGTGGTGAGTaGAACGGTGTGTGTGTGTGTCTGTGTGCGCGTGTT +
Preference number: 3 (lower is better)
Translates to: VSVLGDACPGGE*NGVCVCLCARV
Trigger: AACACGCGCACACAGACACACACACACACCGTTCCACTCACCACCTGGACAGGCGTCCCCCAGCACGGACAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR CCA 72 bp TGTGAGTTGACGGTTGTCATGGCGATGTTGCCCTGCTaGAGCGCTGAGGCTGGGACCACAATCCCCTGGGGG +
Preference number: 3 (lower is better)
Translates to: CELTVVMAMLPC*SAEAGTTIPWG
Trigger: CCCCCAGGGGATTGTGGTCCCAGCCTCAGCGCTCCAGCAGGGCAACATCGCCATGACAACCGTCAACTCACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532623.5
3UTR-3UTR CAA 90 bp GGGTCCCCTCCAGTTGAGCCAGGTAGCCACTCACATCCTGCCACTGAAGGAGGTGCCACTGGTTATGCTTaGGGGCTCCCTCCTGCCCTT +
Preference number: 3 (lower is better)
Translates to: GSPPVEPGSHSHPATEGGATGYA*GLPPAL
Trigger: AAGGGCAGGAGGGAGCCCCAAAGCATAACCAGTGGC...ACCTCCTTCAGTGGCAGGATGTGAGTGGCTACCTGGCTCAACTGGAGGGGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR TCA 72 bp GACGGTTGTCATGGCGATGTTGCCCTGCTGGAGCGCTaGGGCTGGGACCACAATCCCCTGGGGGTTATTGGA +
Preference number: 3 (lower is better)
Translates to: DGCHGDVALLER*GWDHNPLGVIG
Trigger: TCCAATAACCCCCAGGGGATTGTGGTCCCAGCCTCAGCGCTCCAGCAGGGCAACATCGCCATGACAACCGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532623.5
3UTR GCA 72 bp GGGTGTGTGGGATGGGCATCCCCGCAGGCTCTTGGGTaGCATTCTCTGGGCCCTCCCCCACATTTAGGATAT +
Preference number: 3 (lower is better)
Translates to: GCVGWASPQALG*HSLGPPPHLGY
Trigger: ATATCCTAAATGTGGGGGAGGGCCCAGAGAATGGCACCCAAGAGCCTGCGGGGATGCCCATCCCACACACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR CCA 72 bp CCATGTCCATGGTTGCTGTGCGCAGAGACAGGGCCTTaGAGGGATGAGCTGGAGCCTGGTGGATTCCATCCC +
Preference number: 3 (lower is better)
Translates to: PCPWLLCAETGP*RDELEPGGFHP
Trigger: GGGATGGAATCCACCAGGCTCCAGCTCATCCCTCCAAGGCCCTGTCTCTGCGCACAGCAACCATGGACATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR CCA 72 bp GGGCACTGTGGCTCCCATCCCTTTCTCCCATGTCCATaGTTGCTGTGCGCAGAGACAGGGCCTTGGAGGGAT +
Preference number: 3 (lower is better)
Translates to: GHCGSHPFLPCP*LLCAETGPWRD
Trigger: ATCCCTCCAAGGCCCTGTCTCTGCGCACAGCAACCATGGACATGGGAGAAAGGGATGGGAGCCACAGTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR CCA 72 bp GTGGATAGCAGGGTTAGAACAGCTGGGTGGGGTGTGTaGGATGGGCATCCCCGCAGGCTCTTGGGTGCCATT +
Preference number: 3 (lower is better)
Translates to: VDSRVRTAGWGV*DGHPRRLLGAI
Trigger: AATGGCACCCAAGAGCCTGCGGGGATGCCCATCCCACACACCCCACCCAGCTGTTCTAACCCTGCTATCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR-3UTR CAA 90 bp TGCAGCACCCCCGCAGCGATGGAGTTGGGCCAGAATCTTTGGGTGGGCCGGTGCTTGTCGCTGTGCATCTaGGTTTTGAGGCAGGTGATG +
Preference number: 3 (lower is better)
Translates to: CSTPAAMELGQNLWVGRCLSLCI*VLRQVM
Trigger: CATCACCTGCCTCAAAACCAAGATGCACAGCGACAA...GCACCGGCCCACCCAAAGATTCTGGCCCAACTCCATCGCTGCGGGGGTGCTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532623.5
3UTR GCA 72 bp AGCCAGGCTGGGAGCAAAGGGATGGCCGTGGCGACCTaGGGGCTGGAAAGATTCCCAGATAACCTGGTTTCA +
Preference number: 3 (lower is better)
Translates to: SQAGSKGMAVAT*GLERFPDNLVS
Trigger: TGAAACCAGGTTATCTGGGAATCTTTCCAGCCCGCAGGTCGCCACGGCCATCCCTTTGCTCCCAGCCTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR-3UTR CAA 90 bp CTCAAAGTCACCTCCATATGGTTCCTAGCCCAGGGTCTGCCATCTCCTTGGCTCCTCCCATGTCCATGGTaGCTGTGCGCAGAGACAGGG +
Preference number: 3 (lower is better)
Translates to: LKVTSIWFLAQGLPSPWLLPCPW*LCAETG
Trigger: CCCTGTCTCTGCGCACAGCAACCATGGACATGGGAG...GAGCCAAGGAGATGGCAGACCCTGGGCTAGGAACCATATGGAGGTGACTTTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR-3UTR CAA 90 bp CTGGGGGACGCCTGTCCAGGTGGTGAGTGGAACGGTGTGTGTGTGTGTCTGTGTAGAGTGACCATCCTTTaGCTCTACCCCAACCAGGTG +
Preference number: 3 (lower is better)
Translates to: LGDACPGGEWNGVCVCLCRVTIL*LYPNQV
Trigger: CACCTGGTTGGGGTAGAGCAAAAGGATGGTCACTCT...ACACAGACACACACACACACCGTTCCACTCACCACCTGGACAGGCGTCCCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR GCA 72 bp TTCCTTCTAAGTCTGCCCCCGGGCAAAGGCCTACTCTaGGAACAGCACCAATCTGCCTCAGTGCAGGGCTTG +
Preference number: 3 (lower is better)
Translates to: FLLSLPPGKGLL*EQHQSASVQGL
Trigger: CAAGCCCTGCACTGAGGCAGATTGGTGCTGTTCGCAGAGTAGGCCTTTGCCCGGGGGCAGACTTAGAAGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR CCA 72 bp CCTAGGGACAGCTGTGGCCTCAAAGTCACCTCCATATaGTTCCTAGCCCAGGGTCTGCCATCTCCTTGGCTC +
Preference number: 3 (lower is better)
Translates to: PRDSCGLKVTSI*FLAQGLPSPWL
Trigger: GAGCCAAGGAGATGGCAGACCCTGGGCTAGGAACCATATGGAGGTGACTTTGAGGCCACAGCTGTCCCTAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR CCA 72 bp CTGGGAGCAAAGGGATGGCCGTGGCGACCTGCGGGCTaGAAAGATTCCCAGATAACCTGGTTTCACCTTCTC +
Preference number: 3 (lower is better)
Translates to: LGAKGWPWRPAG*KDSQITWFHLL
Trigger: GAGAAGGTGAAACCAGGTTATCTGGGAATCTTTCCAGCCCGCAGGTCGCCACGGCCATCCCTTTGCTCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR-3UTR CAA 90 bp TCAAGGTTAACCTGTGTGTTCTGGATCTGGATGGCTCCCTGGGGGATTGCTTGGGTTGTCATGGCGATGTaGCCCTGCTGGAGCGCTGAG +
Preference number: 3 (lower is better)
Translates to: SRLTCVFWIWMAPWGIAWVVMAM*PCWSAE
Trigger: CTCAGCGCTCCAGCAGGGCAACATCGCCATGACAAC...CCAAGCAATCCCCCAGGGAGCCATCCAGATCCAGAACACACAGGTTAACCTTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532623.5
3UTR TCA 72 bp GAGCCCACCAGCTTACAGTTGGTTTCCAGGAGAGAGTaGAGGGCACTGTGGCTCCCATCCCTTTCTCCCATG +
Preference number: 3 (lower is better)
Translates to: EPTSLQLVSRRE*RALWLPSLSPM
Trigger: CATGGGAGAAAGGGATGGGAGCCACAGTGCCCTTCACTCTCTCCTGGAAACCAACTGTAAGCTGGTGGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR GCA 72 bp CCATCCAATGAGTCATCGTGTGCAGCCATCATAGCCTaGTGCATGGCCATGGTGGCACTGTCTGAGGACAGG +
Preference number: 3 (lower is better)
Translates to: PSNESSCAAIIA*CMAMVALSEDR
Trigger: CCTGTCCTCAGACAGTGCCACCATGGCCATGCAGCAGGCTATGATGGCTGCACACGATGACTCATTGGATGG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532623.5
3UTR CCA 72 bp CAGGGAAGTGGGGCTGGGGTCCTCATTGAAGCTCGGTaGTTGGGAAGGAACAGGTGTCTCCTTTGCCTTTCT +
Preference number: 3 (lower is better)
Translates to: QGSGAGVLIEAR*LGRNRCLLCLS
Trigger: AGAAAGGCAAAGGAGACACCTGTTCCTTCCCAACCACCGAGCTTCAATGAGGACCCCAGCCCCACTTCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR CCA 72 bp GAGGTGAGGTCAAGGTTAACCTGTGTGTTCTGGATCTaGATGGCTCCCTGGGGGATTGCTTGGGTGACCACC +
Preference number: 3 (lower is better)
Translates to: EVRSRLTCVFWI*MAPWGIAWVTT
Trigger: GGTGGTCACCCAAGCAATCCCCCAGGGAGCCATCCAGATCCAGAACACACAGGTTAACCTTGACCTCACCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532623.5
3UTR TCA 72 bp GGCCACTGGTTATGCTTTGGGGCTCCCTCCTGCCCTTaGATGTCTGTCAAAGGAGCTGAGAAACTTCTGGGG +
Preference number: 3 (lower is better)
Translates to: GHWLCFGAPSCP*MSVKGAEKLLG
Trigger: CCCCAGAAGTTTCTCAGCTCCTTTGACAGACATTCAAGGGCAGGAGGGAGCCCCAAAGCATAACCAGTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR TCA 72 bp ATGGAGTTGGGCCAGAATCTTTGGGTGGGCCGGTGCTaGGACTTGATCTTCTTGGCTTTGGGGGCAGGATCT +
Preference number: 3 (lower is better)
Translates to: MELGQNLWVGRC*DLIFLALGAGS
Trigger: AGATCCTGCCCCCAAAGCCAAGAAGATCAAGTCTCAGCACCGGCCCACCCAAAGATTCTGGCCCAACTCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532623.5
3UTR GCA 72 bp CCCGGGCAAAGGCCTACTCTGCGAACAGCACCAATCTaGCTCAGTGCAGGGCTTGTAAACAACTCAAGTCCT +
Preference number: 3 (lower is better)
Translates to: PGQRPTLRTAPI*LSAGLVNNSSP
Trigger: AGGACTTGAGTTGTTTACAAGCCCTGCACTGAGGCAGATTGGTGCTGTTCGCAGAGTAGGCCTTTGCCCGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR GCA 72 bp TGCATGGCCATGGTGGCACTGTCTGAGGACAGGGACTaGAGGTTGTCCAAGTTGATGGAACCATCGGGGTTT +
Preference number: 3 (lower is better)
Translates to: CMAMVALSEDRD*RLSKLMEPSGF
Trigger: AAACCCCGATGGTTCCATCAACTTGGACAACCTGCAGTCCCTGTCCTCAGACAGTGCCACCATGGCCATGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532623.5
3UTR CCA 72 bp TGCAGGGCTTGTAAACAACTCAAGTCCTTCCGTGGGTaGGGGCCATGGGTGCCATCTATCCTCAGGGATTTG +
Preference number: 3 (lower is better)
Translates to: CRACKQLKSFRG*GPWVPSILRDL
Trigger: CAAATCCCTGAGGATAGATGGCACCCATGGCCCCCACCCACGGAAGGACTTGAGTTGTTTACAAGCCCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR-3UTR CAA 90 bp GCCATCTATCCTCAGGGATTTGGTGAGTCCAGATCTCACTCCTGTCTTTCCACAGGGCTGGGGTCCTCATaGAAGCTCGGTGGTTGGGAA +
Preference number: 3 (lower is better)
Translates to: AIYPQGFGESRSHSCLSTGLGSS*KLGGWE
Trigger: TTCCCAACCACCGAGCTTCAATGAGGACCCCAGCCC...TGTGGAAAGACAGGAGTGAGATCTGGACTCACCAAATCCCTGAGGATAGATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR TCA 72 bp GTTGGTATAAGGCTCCACCTGACACAACTTGTGAGTTaGCGGTTGTCATGGCGATGTTGCCCTGCTGGAGCG +
Preference number: 3 (lower is better)
Translates to: VGIRLHLTQLVS*RLSWRCCPAGA
Trigger: CGCTCCAGCAGGGCAACATCGCCATGACAACCGTCAACTCACAAGTTGTGTCAGGTGGAGCCTTATACCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532623.5
3UTR CCA 72 bp TCCATATGGTTCCTAGCCCAGGGTCTGCCATCTCCTTaGCTCTTGGAGTCAACCCAGAAGGGACTCCTCTTA +
Preference number: 3 (lower is better)
Translates to: SIWFLAQGLPSP*LLESTQKGLLL
Trigger: TAAGAGGAGTCCCTTCTGGGTTGACTCCAAGAGCCAAGGAGATGGCAGACCCTGGGCTAGGAACCATATGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR-3UTR CAA 90 bp TGGCCACTGGTTATGCTTTGGGGCTCCCTCCTGCCCTTGAATGTCTGTCAAAGGAAACTCAGTCCCCCTTaGTCTCTCCCCTTCCTTCTA +
Preference number: 3 (lower is better)
Translates to: WPLVMLWGSLLPLNVCQRKLSPP*SLPFLL
Trigger: TAGAAGGAAGGGGAGAGACAAAGGGGGACTGAGTTT...CCTTTGACAGACATTCAAGGGCAGGAGGGAGCCCCAAAGCATAACCAGTGGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR-3UTR CAA 90 bp TCTTTGGGTGGGCCGGTGCTGAGACTTGATCTTCTTGGCTTTGGGGGCAGGATCTTCTCAGGACCTGGATaGCCTTCACCATCAGATTGT +
Preference number: 3 (lower is better)
Translates to: SLGGPVLRLDLLGFGGRIFSGPG*PSPSDC
Trigger: ACAATCTGATGGTGAAGGCAATCCAGGTCCTGAGAA...GATCCTGCCCCCAAAGCCAAGAAGATCAAGTCTCAGCACCGGCCCACCCAAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532623.5
3UTR-3UTR CAA 90 bp CCATCCAATGAGTCATCGTGTGCAGCCATCATAGCCTGCTGCATGGCCATGGTGTCATTCCTGAGCAGGTaGTCGCTGTGCATCTTGGTT +
Preference number: 3 (lower is better)
Translates to: PSNESSCAAIIACCMAMVSFLSR*SLCILV
Trigger: AACCAAGATGCACAGCGACAACCTGCTCAGGAATGA...CACCATGGCCATGCAGCAGGCTATGATGGCTGCACACGATGACTCATTGGATGG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532623.5
3UTR-3UTR CAA 90 bp TCTTTGGGTGGGCCGGTGCTGAGACTTGATCTTCTTGGCTTTGGGGGCAGGATCCAAGAACGCATTATATaGGTGGCATGCTTGGGCAAG +
Preference number: 3 (lower is better)
Translates to: SLGGPVLRLDLLGFGGRIQERII*VACLGK
Trigger: CTTGCCCAAGCATGCCACCAATATAATGCGTTCTTG...GATCCTGCCCCCAAAGCCAAGAAGATCAAGTCTCAGCACCGGCCCACCCAAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532623.5
3UTR TCA 72 bp GGCTCCCTCCTGCCCTTGAATGTCTGTCAAAGGAGCTaGGAAACTTCTGGGGATGAAACTCAGTCCCCCTTT +
Preference number: 3 (lower is better)
Translates to: GSLLPLNVCQRS*ETSGDETQSPF
Trigger: AAAGGGGGACTGAGTTTCATCCCCAGAAGTTTCTCAGCTCCTTTGACAGACATTCAAGGGCAGGAGGGAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR TCA 72 bp CCTTCACCATCAGATTGTCCAGTTCTGGGTCATCGCTaGAGAAGGGTTTGTGCTCCTGTTCCTGCTGGTGGA +
Preference number: 3 (lower is better)
Translates to: PSPSDCPVLGHR*RRVCAPVPAGG
Trigger: TCCACCAGCAGGAACAGGAGCACAAACCCTTCTTCAGCGATGACCCAGAACTGGACAATCTGATGGTGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532623.5
3UTR GCA 72 bp CACCTTCTCCAACCCCTGGCTTCCCACTGGACTAGATaGTTTCCAATGTTTCTTCTGCCTTCCCTGAAGGAC +
Preference number: 3 (lower is better)
Translates to: HLLQPLASHWTR*FPMFLLPSLKD
Trigger: GTCCTTCAGGGAAGGCAGAAGAAACATTGGAAAGCATCTAGTCCAGTGGGAAGCCAGGGGTTGGAGAAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR CCA 72 bp TCGCTGAAGAAGGGTTTGTGCTCCTGTTCCTGCTGGTaGACAAAGTTCTCGATGTCCACATCAAAGCTGGCG +
Preference number: 3 (lower is better)
Translates to: SLKKGLCSCSCW*TKFSMSTSKLA
Trigger: CGCCAGCTTTGATGTGGACATCGAGAACTTTGTCCACCAGCAGGAACAGGAGCACAAACCCTTCTTCAGCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532623.5
3UTR-3UTR CAA 90 bp CTGAAGGTCTATGGAGGGCGTGGAGCACTGAAGGTGGGAACATCTAGGGTAAAATTAACCTCCCACAGGTaGAGCCCACCAGCTTACAGT +
Preference number: 3 (lower is better)
Translates to: LKVYGGRGALKVGTSRVKLTSHR*SPPAYS
Trigger: ACTGTAAGCTGGTGGGCTCAACCTGTGGGAGGTTAA...TTTTACCCTAGATGTTCCCACCTTCAGTGCTCCACGCCCTCCATAGACCTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR-3UTR CAA 90 bp TCAAGGTTAACCTGTGTGTTCTGGATCTGGATGGCTCCCTGGGGGATTGCTTGGTCCTTGCAGAGTTCATaGACTTTCTCCAGCTCCAGC +
Preference number: 3 (lower is better)
Translates to: SRLTCVFWIWMAPWGIAWSLQSS*TFSSSS
Trigger: GCTGGAGCTGGAGAAAGTCAATGAACTCTGCAAGGA...CCAAGCAATCCCCCAGGGAGCCATCCAGATCCAGAACACACAGGTTAACCTTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532623.5
3UTR-3UTR CAA 90 bp TCCTCGTTTGTTCTTGGACTTCTTATCCTCATTGTCCAGGAGGGAGGTGAGGTCATCCCCTGGGGGTTATaGGAGACTCCGGACATGGAA +
Preference number: 3 (lower is better)
Translates to: SSFVLGLLILIVQEGGEVIPWGL*ETPDME
Trigger: TTCCATGTCCGGAGTCTCCAATAACCCCCAGGGGAT...GACCTCACCTCCCTCCTGGACAATGAGGATAAGAAGTCCAAGAACAAACGAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532623.5
3UTR-3UTR CAA 90 bp CCATCCAATGAGTCATCGTGTGCAGCCATCATAGCCTGCTGCATGGCCATGGTGGCATTGATGAACCAGTaGTTTACTTGCAGGAGGGTG +
Preference number: 3 (lower is better)
Translates to: PSNESSCAAIIACCMAMVALMNQ*FTCRRV
Trigger: CACCCTCCTGCAAGTAAACAACTGGTTCATCAATGC...CACCATGGCCATGCAGCAGGCTATGATGGCTGCACACGATGACTCATTGGATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532623.5
3UTR TCA 72 bp GAGAAATACATTCATTTCAGGGAGACCTCGGAAGAGTaGCCATCCTTTTGCTCTACCCCAACCAGGTGGGGG +
Preference number: 3 (lower is better)
Translates to: EKYIHFRETSEE*PSFCSTPTRWG
Trigger: CCCCCACCTGGTTGGGGTAGAGCAAAAGGATGGTCACTCTTCCGAGGTCTCCCTGAAATGAATGTATTTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR GCA 72 bp GGGTCATCGCTGAAGAAGGGTTTGTGCTCCTGTTCCTaGTGGTGGACAAAGTTCTCGATGTCCACATCAAAG +
Preference number: 3 (lower is better)
Translates to: GSSLKKGLCSCS*WWTKFSMSTSK
Trigger: CTTTGATGTGGACATCGAGAACTTTGTCCACCAGCAGGAACAGGAGCACAAACCCTTCTTCAGCGATGACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532623.5
3UTR GCA 72 bp TTGTCCAGTTCTGGGTCATCGCTGAAGAAGGGTTTGTaGTCCTGTTCCTGCTGGTGGACAAAGTTCTCGATG +
Preference number: 3 (lower is better)
Translates to: LSSSGSSLKKGL*SCSCWWTKFSM
Trigger: CATCGAGAACTTTGTCCACCAGCAGGAACAGGAGCACAAACCCTTCTTCAGCGATGACCCAGAACTGGACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532623.5
3UTR-3UTR CAA 90 bp TTCTGTGATCACCTAGGGACAGCTGTGGCCTCAAAGTCACCTCCATATGGTTCCTCTATCCTCAGGGATTaGGTGAGTCCAGATCTCACT +
Preference number: 3 (lower is better)
Translates to: FCDHLGTAVASKSPPYGSSILRD*VSPDLT
Trigger: AGTGAGATCTGGACTCACCAAATCCCTGAGGATAGA...GGAACCATATGGAGGTGACTTTGAGGCCACAGCTGTCCCTAGGTGATCACAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR CCA 72 bp TCATCGCTGAAGAAGGGTTTGTGCTCCTGTTCCTGCTaGTGGACAAAGTTCTCGATGTCCACATCAAAGCTG +
Preference number: 3 (lower is better)
Translates to: SSLKKGLCSCSC*WTKFSMSTSKL
Trigger: CAGCTTTGATGTGGACATCGAGAACTTTGTCCACCAGCAGGAACAGGAGCACAAACCCTTCTTCAGCGATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532623.5
CDS-3UTR CCA 90 bp GTGTGGGATGGGCATCCCCGCAGGCTCTTGGGTGCCATTCTCTGGGCCCTCCCCGCCTCCAGCTGGGCCTaGGGGTCGATGGGGGCACTG +
Preference number: 4 (lower is better)
Translates to: VWDGHPRRLLGAILWALPASSWA*GSMGAL
Trigger: CAGTGCCCCCATCGACCCCCAGGCCCAGCTGGAGGC...GGGGAGGGCCCAGAGAATGGCACCCAAGAGCCTGCGGGGATGCCCATCCCACAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR TCA 90 bp CGACTGGCCCCGCCAAACAGAGTCCTCGGCAGTTCCAGGGAAGTGGGGCTGGGGGCCCTGCTGGAGCGCTaGGGCTGGGACCACAATCCC +
Preference number: 4 (lower is better)
Translates to: RLAPPNRVLGSSREVGLGALLER*GWDHNP
Trigger: GGGATTGTGGTCCCAGCCTCAGCGCTCCAGCAGGGC...CCCCAGCCCCACTTCCCTGGAACTGCCGAGGACTCTGTTTGGCGGGGCCAGTCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR GCA 90 bp TGCAGCACCCCCGCAGCGATGGAGTTGGGCCAGAATCTTTGGGTGGGCCGGTGCGCACCGCCCTGCTGCTaGAGCACCCCCGCAGCGATG +
Preference number: 4 (lower is better)
Translates to: CSTPAAMELGQNLWVGRCAPPCC*STPAAM
Trigger: CATCGCTGCGGGGGTGCTGCAGCAGCAGGGCGGTGC...GCACCGGCCCACCCAAAGATTCTGGCCCAACTCCATCGCTGCGGGGGTGCTGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000532623.5
CDS-3UTR GCA 90 bp CCATGGGGTGAGAGGGAACCGGAGGAGAGGGTGCCAACCAAGGGGGTCTGGAAGGCACCGCCCTGCTGCTaGAGCACCCCCGCAGCGATG +
Preference number: 4 (lower is better)
Translates to: PWGEREPEERVPTKGVWKAPPCC*STPAAM
Trigger: CATCGCTGCGGGGGTGCTGCAGCAGCAGGGCGGTGC...CTTCCAGACCCCCTTGGTTGGCACCCTCTCCTCCGGTTCCCTCTCACCCCATGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR CCA 90 bp CAGCCATGGGGTGAGAGGGAACCGGAGGAGAGGGTGCCAACCAAGGGGGTCTGGGCTGGGTGGGGTGTGTaGGATGGGCATCCCCGCAGG +
Preference number: 4 (lower is better)
Translates to: QPWGEREPEERVPTKGVWAGWGV*DGHPRR
Trigger: CCTGCGGGGATGCCCATCCCACACACCCCACCCAGC...CCAGACCCCCTTGGTTGGCACCCTCTCCTCCGGTTCCCTCTCACCCCATGGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR TCA 90 bp TGTGTGGGATGGGCATCCCCGCAGGCTCTTGGGTGCCATTCTCTGGGCCCTCCCGGGGGATTGCTTGGGTaGCCACCTGACCCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: CVGWASPQALGCHSLGPPGGLLG*PPDPGR
Trigger: CCTCCCAGGGTCAGGTGGTCACCCAAGCAATCCCCC...GGGAGGGCCCAGAGAATGGCACCCAAGAGCCTGCGGGGATGCCCATCCCACACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR GCA 90 bp CTGGGGGACGCCTGTCCAGGTGGTGAGTGGAACGGTGTGTGTGTGTGTCTGTGTCCTGGGGCACCGCCCTaGTGCTGCAGCACCCCCGCA +
Preference number: 4 (lower is better)
Translates to: LGDACPGGEWNGVCVCLCPGAPP*CCSTPA
Trigger: TGCGGGGGTGCTGCAGCAGCAGGGCGGTGCCCCAGG...ACACAGACACACACACACACCGTTCCACTCACCACCTGGACAGGCGTCCCCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR GCA 90 bp TGTGTGGGATGGGCATCCCCGCAGGCTCTTGGGTGCCATTCTCTGGGCCCTCCCCCGCAGGCTCTTGGGTaGCATTCTCTGGGCCCTCCC +
Preference number: 4 (lower is better)
Translates to: CVGWASPQALGCHSLGPPPQALG*HSLGPP
Trigger: GGGAGGGCCCAGAGAATGGCACCCAAGAGCCTGCGG...GGGAGGGCCCAGAGAATGGCACCCAAGAGCCTGCGGGGATGCCCATCCCACACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR CCA 90 bp GTGTGGGATGGGCATCCCCGCAGGCTCTTGGGTGCCATTCTCTGGGCCCTCCCCGCTGTCCTGGTAGGGTaGGGGCGGGACATTCTGCGT +
Preference number: 4 (lower is better)
Translates to: VWDGHPRRLLGAILWALPAVLVG*GRDILR
Trigger: ACGCAGAATGTCCCGCCCCCACCCTACCAGGACAGC...GGGGAGGGCCCAGAGAATGGCACCCAAGAGCCTGCGGGGATGCCCATCCCACAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR CCA 90 bp TGCAGCACCCCCGCAGCGATGGAGTTGGGCCAGAATCTTTGGGTGGGCCGGTGCGCGATGTTGCCCTGCTaGAGCGCTGAGGCTGGGACC +
Preference number: 4 (lower is better)
Translates to: CSTPAAMELGQNLWVGRCAMLPC*SAEAGT
Trigger: GGTCCCAGCCTCAGCGCTCCAGCAGGGCAACATCGC...GCACCGGCCCACCCAAAGATTCTGGCCCAACTCCATCGCTGCGGGGGTGCTGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532623.5
CDS-3UTR CCA 90 bp CCATGGGGTGAGAGGGAACCGGAGGAGAGGGTGCCAACCAAGGGGGTCTGGAAGCTGGGAGCAAAGGGATaGCCGTGGCGACCTGCGGGC +
Preference number: 4 (lower is better)
Translates to: PWGEREPEERVPTKGVWKLGAKG*PWRPAG
Trigger: GCCCGCAGGTCGCCACGGCCATCCCTTTGCTCCCAG...CTTCCAGACCCCCTTGGTTGGCACCCTCTCCTCCGGTTCCCTCTCACCCCATGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR GCA 90 bp TGTGTGGGATGGGCATCCCCGCAGGCTCTTGGGTGCCATTCTCTGGGCCCTCCCGGCTCCCTGGGGGATTaGTTGGGTGACCACCTGACC +
Preference number: 4 (lower is better)
Translates to: CVGWASPQALGCHSLGPPGSLGD*LGDHLT
Trigger: GGTCAGGTGGTCACCCAAGCAATCCCCCAGGGAGCC...GGGAGGGCCCAGAGAATGGCACCCAAGAGCCTGCGGGGATGCCCATCCCACACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR GCA 90 bp TGCAGCACCCCCGCAGCGATGGAGTTGGGCCAGAATCTTTGGGTGGGCCGGTGCGCATCAAGCATGGGCTaGAGGATGCGCCTCCGGGCA +
Preference number: 4 (lower is better)
Translates to: CSTPAAMELGQNLWVGRCASSMG*RMRLRA
Trigger: TGCCCGGAGGCGCATCCTGCAGCCCATGCTTGATGC...GCACCGGCCCACCCAAAGATTCTGGCCCAACTCCATCGCTGCGGGGGTGCTGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532623.5
CDS-3UTR CCA 90 bp GTGTGGGATGGGCATCCCCGCAGGCTCTTGGGTGCCATTCTCTGGGCCCTCCCCGCGGGACATTCTGCGTaGCCATCATCGTCAGAGCGG +
Preference number: 4 (lower is better)
Translates to: VWDGHPRRLLGAILWALPAGHSA*PSSSER
Trigger: CCGCTCTGACGATGATGGCCACGCAGAATGTCCCGC...GGGGAGGGCCCAGAGAATGGCACCCAAGAGCCTGCGGGGATGCCCATCCCACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR CCA 90 bp CCATGGGGTGAGAGGGAACCGGAGGAGAGGGTGCCAACCAAGGGGGTCTGGAAGCTGGGCCTTGGAGGGTaGCTGGGCGGTTGCCGTCAT +
Preference number: 4 (lower is better)
Translates to: PWGEREPEERVPTKGVWKLGLGG*LGGCRH
Trigger: ATGACGGCAACCGCCCAGCCACCCTCCAAGGCCCAG...CTTCCAGACCCCCTTGGTTGGCACCCTCTCCTCCGGTTCCCTCTCACCCCATGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR CCA 90 bp CTGGGGGACGCCTGTCCAGGTGGTGAGTGGAACGGTGTGTGTGTGTGTCTGTGTGGGCCTGGGGGTCGATaGGGGCACTGGGCACAGGTG +
Preference number: 4 (lower is better)
Translates to: LGDACPGGEWNGVCVCLCGPGGR*GHWAQV
Trigger: CACCTGTGCCCAGTGCCCCCATCGACCCCCAGGCCC...ACACAGACACACACACACACCGTTCCACTCACCACCTGGACAGGCGTCCCCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR CCA 90 bp GTGTGGGATGGGCATCCCCGCAGGCTCTTGGGTGCCATTCTCTGGGCCCTCCCCTGCTGGCATCAAGCATaGGCTGCAGGATGCGCCTCC +
Preference number: 4 (lower is better)
Translates to: VWDGHPRRLLGAILWALPCWHQA*AAGCAS
Trigger: GGAGGCGCATCCTGCAGCCCATGCTTGATGCCAGCA...GGGGAGGGCCCAGAGAATGGCACCCAAGAGCCTGCGGGGATGCCCATCCCACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR CCA 90 bp GTGTGGGATGGGCATCCCCGCAGGCTCTTGGGTGCCATTCTCTGGGCCCTCCCCGCTGCATGGCCATGGTaGCACTGTCTGAGGACAGGG +
Preference number: 4 (lower is better)
Translates to: VWDGHPRRLLGAILWALPAAWPW*HCLRTG
Trigger: CCCTGTCCTCAGACAGTGCCACCATGGCCATGCAGC...GGGGAGGGCCCAGAGAATGGCACCCAAGAGCCTGCGGGGATGCCCATCCCACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR CCA 90 bp GATGGGCATCCCCGCAGGCTCTTGGGTGCCATTCTCTGGGCCCTCCCCCACATTCCAGTGTGTCCGTGCTaGGGGACGCCTGTCCAGGTG +
Preference number: 4 (lower is better)
Translates to: DGHPRRLLGAILWALPHIPVCPC*GTPVQV
Trigger: CACCTGGACAGGCGTCCCCCAGCACGGACACACTGG...AATGTGGGGGAGGGCCCAGAGAATGGCACCCAAGAGCCTGCGGGGATGCCCATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR TCA 90 bp TGTGTGGGATGGGCATCCCCGCAGGCTCTTGGGTGCCATTCTCTGGGCCCTCCCCCTGTGAGTGAAGGTTaGTGGAGGGCTGGTTGGGGG +
Preference number: 4 (lower is better)
Translates to: CVGWASPQALGCHSLGPPPVSEG*WRAGWG
Trigger: CCCCCAACCAGCCCTCCATCAACCTTCACTCACAGG...GGGAGGGCCCAGAGAATGGCACCCAAGAGCCTGCGGGGATGCCCATCCCACACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR TCA 90 bp TGCAGCACCCCCGCAGCGATGGAGTTGGGCCAGAATCTTTGGGTGGGCCGGTGCGCTTGGGTGACCACCTaGCCCTGGGAGGTTACCATG +
Preference number: 4 (lower is better)
Translates to: CSTPAAMELGQNLWVGRCAWVTT*PWEVTM
Trigger: CATGGTAACCTCCCAGGGTCAGGTGGTCACCCAAGC...GCACCGGCCCACCCAAAGATTCTGGCCCAACTCCATCGCTGCGGGGGTGCTGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532623.5
CDS-3UTR TCA 90 bp GAGTTGACGGTTGTCATGGCGATGTTGCCCTGCTGGAGCGCTGAGGCTGGGACCGGGGGATTGCTTGGGTaGCCACCTGACCCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: ELTVVMAMLPCWSAEAGTGGLLG*PPDPGR
Trigger: CCTCCCAGGGTCAGGTGGTCACCCAAGCAATCCCCC...GGTCCCAGCCTCAGCGCTCCAGCAGGGCAACATCGCCATGACAACCGTCAACTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532623.5
CDS-3UTR TCA 90 bp GTGTGGGATGGGCATCCCCGCAGGCTCTTGGGTGCCATTCTCTGGGCCCTCCCCTCCTCTCCTGCTCAGTaGTCAGTGCCATCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: VWDGHPRRLLGAILWALPSSPAQ*SVPSGL
Trigger: CAGCCCAGATGGCACTGATCACTGAGCAGGAGAGGA...GGGGAGGGCCCAGAGAATGGCACCCAAGAGCCTGCGGGGATGCCCATCCCACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR TCA 90 bp GTGTGGGATGGGCATCCCCGCAGGCTCTTGGGTGCCATTCTCTGGGCCCTCCCCCTCACATCCTGCCACTaGAGGAGGTGGCCAATGCAC +
Preference number: 4 (lower is better)
Translates to: VWDGHPRRLLGAILWALPLTSCH*RRWPMH
Trigger: GTGCATTGGCCACCTCCTTCAGTGGCAGGATGTGAG...GGGGAGGGCCCAGAGAATGGCACCCAAGAGCCTGCGGGGATGCCCATCCCACAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR GCA 90 bp CCATGGGGTGAGAGGGAACCGGAGGAGAGGGTGCCAACCAAGGGGGTCTGGAAGATGGCGATGTTGCCCTaGTGGAGCGCTGAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: PWGEREPEERVPTKGVWKMAMLP*WSAEAG
Trigger: CCCAGCCTCAGCGCTCCAGCAGGGCAACATCGCCAT...CTTCCAGACCCCCTTGGTTGGCACCCTCTCCTCCGGTTCCCTCTCACCCCATGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR GCA 90 bp CGACTGGCCCCGCCAAACAGAGTCCTCGGCAGTTCCAGGGAAGTGGGGCTGGGGGTCTGGGCTGCGATCTaGCTCTTCTCATCCTCCGTG +
Preference number: 4 (lower is better)
Translates to: RLAPPNRVLGSSREVGLGVWAAI*LFSSSV
Trigger: CACGGAGGATGAGAAGAGGCAGATCGCAGCCCAGAC...CCCCAGCCCCACTTCCCTGGAACTGCCGAGGACTCTGTTTGGCGGGGCCAGTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR GCA 90 bp CGACTGGCCCCGCCAAACAGAGTCCTCGGCAGTTCCAGGGAAGTGGGGCTGGGGTCTTTCCACACAGGCTaGTCGACTGGCCCCGCCAAA +
Preference number: 4 (lower is better)
Translates to: RLAPPNRVLGSSREVGLGSFHTG*STGPAK
Trigger: TTTGGCGGGGCCAGTCGAGCAGCCTGTGTGGAAAGA...CCCCAGCCCCACTTCCCTGGAACTGCCGAGGACTCTGTTTGGCGGGGCCAGTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR CCA 90 bp TGTGTGGGATGGGCATCCCCGCAGGCTCTTGGGTGCCATTCTCTGGGCCCTCCCGGTTGCCGTCATCTGTaGGCTGTCCTGGTAGGGTGG +
Preference number: 4 (lower is better)
Translates to: CVGWASPQALGCHSLGPPGCRHL*AVLVGW
Trigger: CCACCCTACCAGGACAGCCCACAGATGACGGCAACC...GGGAGGGCCCAGAGAATGGCACCCAAGAGCCTGCGGGGATGCCCATCCCACACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR CCA 90 bp TTCCACACAGGCTGCTCGACTGGCCCCGCCAAACAGAGTCCTCGGCAGTTCCAGGCGATGTTGCCCTGCTaGAGCGCTGAGGCTGGGACC +
Preference number: 4 (lower is better)
Translates to: FHTGCSTGPAKQSPRQFQAMLPC*SAEAGT
Trigger: GGTCCCAGCCTCAGCGCTCCAGCAGGGCAACATCGC...CTGGAACTGCCGAGGACTCTGTTTGGCGGGGCCAGTCGAGCAGCCTGTGTGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR CCA 90 bp GTGTGGGATGGGCATCCCCGCAGGCTCTTGGGTGCCATTCTCTGGGCCCTCCCCAGGGTGAGGTTGGTCTaGGCTGCGATCTGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: VWDGHPRRLLGAILWALPRVRLV*AAICLF
Trigger: GAAGAGGCAGATCGCAGCCCAGACCAACCTCACCCT...GGGGAGGGCCCAGAGAATGGCACCCAAGAGCCTGCGGGGATGCCCATCCCACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR CCA 90 bp CCATGGGGTGAGAGGGAACCGGAGGAGAGGGTGCCAACCAAGGGGGTCTGGAAGACTCAAGTCCTTCCGTaGGTGGGGGCCATGGGTGCC +
Preference number: 4 (lower is better)
Translates to: PWGEREPEERVPTKGVWKTQVLP*VGAMGA
Trigger: GGCACCCATGGCCCCCACCCACGGAAGGACTTGAGT...CTTCCAGACCCCCTTGGTTGGCACCCTCTCCTCCGGTTCCCTCTCACCCCATGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR CCA 90 bp GTGTGGGATGGGCATCCCCGCAGGCTCTTGGGTGCCATTCTCTGGGCCCTCCCCGGTCTATGGAGGGCGTaGAGCACTGAAGGTGGGAAC +
Preference number: 4 (lower is better)
Translates to: VWDGHPRRLLGAILWALPGLWRA*STEGGN
Trigger: GTTCCCACCTTCAGTGCTCCACGCCCTCCATAGACC...GGGGAGGGCCCAGAGAATGGCACCCAAGAGCCTGCGGGGATGCCCATCCCACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR TCA 90 bp CGACTGGCCCCGCCAAACAGAGTCCTCGGCAGTTCCAGGGAAGTGGGGCTGGGGCCCCTAGATCATTCCTaGGCAGGTTGTCGCTGTGCA +
Preference number: 4 (lower is better)
Translates to: RLAPPNRVLGSSREVGLGPLDHS*AGCRCA
Trigger: TGCACAGCGACAACCTGCTCAGGAATGATCTAGGGG...CCCCAGCCCCACTTCCCTGGAACTGCCGAGGACTCTGTTTGGCGGGGCCAGTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR TCA 90 bp CAGCCATGGGGTGAGAGGGAACCGGAGGAGAGGGTGCCAACCAAGGGGGTCTGGCCAAGCCCAGGTCGCTaGCATTTGTCGTCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: QPWGEREPEERVPTKGVWPSPGR*HLSSAA
Trigger: AGCTGCAGACGACAAATGTCAGCGACCTGGGCTTGG...CCAGACCCCCTTGGTTGGCACCCTCTCCTCCGGTTCCCTCTCACCCCATGGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR TCA 90 bp GGGGGCAGGATCTGGGTTGCTGGCATCAAGCATGGGCTGCAGGATGCGCCTCCGCCAAGCCCAGGTCGCTaGCATTTGTCGTCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: GGRIWVAGIKHGLQDAPPPSPGR*HLSSAA
Trigger: AGCTGCAGACGACAAATGTCAGCGACCTGGGCTTGG...CGGAGGCGCATCCTGCAGCCCATGCTTGATGCCAGCAACCCAGATCCTGCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532623.5
CDS-3UTR TCA 90 bp GATGGGCATCCCCGCAGGCTCTTGGGTGCCATTCTCTGGGCCCTCCCCCACATTGGCTGGGGTCCTCATTaGAGCTCGGTGGTTGGGAAG +
Preference number: 4 (lower is better)
Translates to: DGHPRRLLGAILWALPHIGWGPH*SSVVGK
Trigger: CTTCCCAACCACCGAGCTTCAATGAGGACCCCAGCC...AATGTGGGGGAGGGCCCAGAGAATGGCACCCAAGAGCCTGCGGGGATGCCCATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR GCA 90 bp CAGCCATGGGGTGAGAGGGAACCGGAGGAGAGGGTGCCAACCAAGGGGGTCTGGGGGCAGGATCTGGGTTaGTGGCATCAAGCATGGGCT +
Preference number: 4 (lower is better)
Translates to: QPWGEREPEERVPTKGVWGQDLG*WHQAWA
Trigger: AGCCCATGCTTGATGCCAGCAACCCAGATCCTGCCC...CCAGACCCCCTTGGTTGGCACCCTCTCCTCCGGTTCCCTCTCACCCCATGGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR GCA 90 bp TGGGATGGGCATCCCCGCAGGCTCTTGGGTGCCATTCTCTGGGCCCTCCCCCACGCGACACTCCTCTCCTaGTCAGTGATCAGTGCCATC +
Preference number: 4 (lower is better)
Translates to: WDGHPRRLLGAILWALPHATLLS*SVISAI
Trigger: GATGGCACTGATCACTGAGCAGGAGAGGAGTGTCGC...GTGGGGGAGGGCCCAGAGAATGGCACCCAAGAGCCTGCGGGGATGCCCATCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR GCA 90 bp CCATGGGGTGAGAGGGAACCGGAGGAGAGGGTGCCAACCAAGGGGGTCTGGAAGATGGCCGTGGCGACCTaGGGGCTGGAAAGATTCCCA +
Preference number: 4 (lower is better)
Translates to: PWGEREPEERVPTKGVWKMAVAT*GLERFP
Trigger: TGGGAATCTTTCCAGCCCGCAGGTCGCCACGGCCAT...CTTCCAGACCCCCTTGGTTGGCACCCTCTCCTCCGGTTCCCTCTCACCCCATGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR CCA 90 bp GATGGGCATCCCCGCAGGCTCTTGGGTGCCATTCTCTGGGCCCTCCCCCACATTCGTCAGAGCGGGGGCTaGGGAGGCATGTTGCATCAT +
Preference number: 4 (lower is better)
Translates to: DGHPRRLLGAILWALPHIRQSGG*GGMLHH
Trigger: ATGATGCAACATGCCTCCCCAGCCCCCGCTCTGACG...AATGTGGGGGAGGGCCCAGAGAATGGCACCCAAGAGCCTGCGGGGATGCCCATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR CCA 90 bp CAGCCATGGGGTGAGAGGGAACCGGAGGAGAGGGTGCCAACCAAGGGGGTCTGGATCTGGATGGCTCCCTaGGGGATTGCTTGGGTGACC +
Preference number: 4 (lower is better)
Translates to: QPWGEREPEERVPTKGVWIWMAP*GIAWVT
Trigger: GGTCACCCAAGCAATCCCCCAGGGAGCCATCCAGAT...CCAGACCCCCTTGGTTGGCACCCTCTCCTCCGGTTCCCTCTCACCCCATGGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR CCA 90 bp TGCAGCACCCCCGCAGCGATGGAGTTGGGCCAGAATCTTTGGGTGGGCCGGTGCAGGGTGAGGTTGGTCTaGGCTGCGATCTGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: CSTPAAMELGQNLWVGRCRVRLV*AAICLF
Trigger: GAAGAGGCAGATCGCAGCCCAGACCAACCTCACCCT...GCACCGGCCCACCCAAAGATTCTGGCCCAACTCCATCGCTGCGGGGGTGCTGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532623.5
CDS-3UTR CCA 90 bp TGTGTGGGATGGGCATCCCCGCAGGCTCTTGGGTGCCATTCTCTGGGCCCTCCCGTGATCAGTGCCATCTaGGCTGCCCGACTACTCCAG +
Preference number: 4 (lower is better)
Translates to: CVGWASPQALGCHSLGPPVISAI*AARLLQ
Trigger: CTGGAGTAGTCGGGCAGCCCAGATGGCACTGATCAC...GGGAGGGCCCAGAGAATGGCACCCAAGAGCCTGCGGGGATGCCCATCCCACACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR CCA 90 bp CAGCCATGGGGTGAGAGGGAACCGGAGGAGAGGGTGCCAACCAAGGGGGTCTGGCCACTGGTTATGCTTTaGGGCTCCCTCCTGCCCTTG +
Preference number: 4 (lower is better)
Translates to: QPWGEREPEERVPTKGVWPLVML*GSLLPL
Trigger: CAAGGGCAGGAGGGAGCCCCAAAGCATAACCAGTGG...CCAGACCCCCTTGGTTGGCACCCTCTCCTCCGGTTCCCTCTCACCCCATGGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR CCA 90 bp CAGCCATGGGGTGAGAGGGAACCGGAGGAGAGGGTGCCAACCAAGGGGGTCTGGCACTCCTCTGGCCACTaGTTATGCTTTGGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: QPWGEREPEERVPTKGVWHSSGH*LCFGAP
Trigger: GGGAGCCCCAAAGCATAACCAGTGGCCAGAGGAGTG...CCAGACCCCCTTGGTTGGCACCCTCTCCTCCGGTTCCCTCTCACCCCATGGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR CCA 90 bp CAGCCATGGGGTGAGAGGGAACCGGAGGAGAGGGTGCCAACCAAGGGGGTCTGGGCCCTCCCACTCCTCTaGCCACTGGTTATGCTTTGG +
Preference number: 4 (lower is better)
Translates to: QPWGEREPEERVPTKGVWALPLL*PLVMLW
Trigger: CCAAAGCATAACCAGTGGCCAGAGGAGTGGGAGGGC...CCAGACCCCCTTGGTTGGCACCCTCTCCTCCGGTTCCCTCTCACCCCATGGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR CCA 90 bp TTCCACACAGGCTGCTCGACTGGCCCCGCCAAACAGAGTCCTCGGCAGTTCCAGGTGGGGTGTGTGGGATaGGCATCCCCGCAGGCTCTT +
Preference number: 4 (lower is better)
Translates to: FHTGCSTGPAKQSPRQFQVGCVG*ASPQAL
Trigger: AAGAGCCTGCGGGGATGCCCATCCCACACACCCCAC...CTGGAACTGCCGAGGACTCTGTTTGGCGGGGCCAGTCGAGCAGCCTGTGTGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR TCA 90 bp TCTTTGGGTGGGCCGGTGCTGAGACTTGATCTTCTTGGCTTTGGGGGCAGGATCGCCCTGCTGGAGCGCTaGGGCTGGGACCACAATCCC +
Preference number: 4 (lower is better)
Translates to: SLGGPVLRLDLLGFGGRIALLER*GWDHNP
Trigger: GGGATTGTGGTCCCAGCCTCAGCGCTCCAGCAGGGC...GATCCTGCCCCCAAAGCCAAGAAGATCAAGTCTCAGCACCGGCCCACCCAAAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532623.5
CDS-3UTR TCA 90 bp TTCCACACAGGCTGCTCGACTGGCCCCGCCAAACAGAGTCCTCGGCAGTTCCAGGCTTGGGTGACCACCTaGCCCTGGGAGGTTACCATG +
Preference number: 4 (lower is better)
Translates to: FHTGCSTGPAKQSPRQFQAWVTT*PWEVTM
Trigger: CATGGTAACCTCCCAGGGTCAGGTGGTCACCCAAGC...CTGGAACTGCCGAGGACTCTGTTTGGCGGGGCCAGTCGAGCAGCCTGTGTGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR TCA 90 bp GATGGGCATCCCCGCAGGCTCTTGGGTGCCATTCTCTGGGCCCTCCCCCACATTTTACTTGCAGGAGGGTaGGGTTGGTCTGGGCTGCGA +
Preference number: 4 (lower is better)
Translates to: DGHPRRLLGAILWALPHILLAGG*GWSGLR
Trigger: TCGCAGCCCAGACCAACCTCACCCTCCTGCAAGTAA...AATGTGGGGGAGGGCCCAGAGAATGGCACCCAAGAGCCTGCGGGGATGCCCATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR TCA 90 bp CCATGGGGTGAGAGGGAACCGGAGGAGAGGGTGCCAACCAAGGGGGTCTGGAAGTGGGTGGGCCGGTGCTaGGACTTGATCTTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: PWGEREPEERVPTKGVWKWVGRC*DLIFLA
Trigger: AGCCAAGAAGATCAAGTCTCAGCACCGGCCCACCCA...CTTCCAGACCCCCTTGGTTGGCACCCTCTCCTCCGGTTCCCTCTCACCCCATGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR TCA 90 bp TTCCACACAGGCTGCTCGACTGGCCCCGCCAAACAGAGTCCTCGGCAGTTCCAGGAGGGCGTGGAGCACTaGAGGTGGGAACATCTAGGG +
Preference number: 4 (lower is better)
Translates to: FHTGCSTGPAKQSPRQFQEGVEH*RWEHLG
Trigger: CCCTAGATGTTCCCACCTTCAGTGCTCCACGCCCTC...CTGGAACTGCCGAGGACTCTGTTTGGCGGGGCCAGTCGAGCAGCCTGTGTGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR GCA 90 bp AGGTTGTCCAAGTTGATGGAACCATCGGGGTTTGTCCCTGGGGCACCGCCCTGCATGGCGATGTTGCCCTaGTGGAGCGCTGAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: RLSKLMEPSGFVPGAPPCMAMLP*WSAEAG
Trigger: CCCAGCCTCAGCGCTCCAGCAGGGCAACATCGCCAT...GCAGGGCGGTGCCCCAGGGACAAACCCCGATGGTTCCATCAACTTGGACAACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532623.5
CDS-3UTR GCA 90 bp TGTGTGGGATGGGCATCCCCGCAGGCTCTTGGGTGCCATTCTCTGGGCCCTCCCGGCAAAGGCCTACTCTaGGAACAGCACCAATCTGCC +
Preference number: 4 (lower is better)
Translates to: CVGWASPQALGCHSLGPPGKGLL*EQHQSA
Trigger: GGCAGATTGGTGCTGTTCGCAGAGTAGGCCTTTGCC...GGGAGGGCCCAGAGAATGGCACCCAAGAGCCTGCGGGGATGCCCATCCCACACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR GCA 90 bp TTCCACACAGGCTGCTCGACTGGCCCCGCCAAACAGAGTCCTCGGCAGTTCCAGATGTGGGCACCTGTGTaGCAGTGTGTCCGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: FHTGCSTGPAKQSPRQFQMWAPV*QCVRAG
Trigger: CCCAGCACGGACACACTGGCACACAGGTGCCCACAT...CTGGAACTGCCGAGGACTCTGTTTGGCGGGGCCAGTCGAGCAGCCTGTGTGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR CCA 90 bp CTGGGGGACGCCTGTCCAGGTGGTGAGTGGAACGGTGTGTGTGTGTGTCTGTGTGCCTTGGAGGGTGGCTaGGCGGTTGCCGTCATCTGT +
Preference number: 4 (lower is better)
Translates to: LGDACPGGEWNGVCVCLCALEGG*AVAVIC
Trigger: ACAGATGACGGCAACCGCCCAGCCACCCTCCAAGGC...ACACAGACACACACACACACCGTTCCACTCACCACCTGGACAGGCGTCCCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR CCA 90 bp GATGGGCATCCCCGCAGGCTCTTGGGTGCCATTCTCTGGGCCCTCCCCCACATTGGGACCACAATCCCCTaGGGGTTATTGGAGACTCCG +
Preference number: 4 (lower is better)
Translates to: DGHPRRLLGAILWALPHIGTTIP*GLLETP
Trigger: CGGAGTCTCCAATAACCCCCAGGGGATTGTGGTCCC...AATGTGGGGGAGGGCCCAGAGAATGGCACCCAAGAGCCTGCGGGGATGCCCATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR CCA 90 bp GGCTGGGACCACAATCCCCTGGGGGTTATTGGAGACTCCGGACATGGAATTGGGATCGGGGTTTGTCCCTaGGGCACCGCCCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: GWDHNPLGVIGDSGHGIGIGVCP*GTALLL
Trigger: CAGCAGCAGGGCGGTGCCCCAGGGACAAACCCCGAT...CCCAATTCCATGTCCGGAGTCTCCAATAACCCCCAGGGGATTGTGGTCCCAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000532623.5
CDS-3UTR CCA 90 bp CTGGGGGACGCCTGTCCAGGTGGTGAGTGGAACGGTGTGTGTGTGTGTCTGTGTATCCCCGCAGGCTCTTaGGTGCCATTCTCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: LGDACPGGEWNGVCVCLCIPAGS*VPFSGP
Trigger: GGGCCCAGAGAATGGCACCCAAGAGCCTGCGGGGAT...ACACAGACACACACACACACCGTTCCACTCACCACCTGGACAGGCGTCCCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR TCA 90 bp TTCCACACAGGCTGCTCGACTGGCCCCGCCAAACAGAGTCCTCGGCAGTTCCAGCATGGTGGCACTGTCTaGGGACAGGGACTGCAGGTT +
Preference number: 4 (lower is better)
Translates to: FHTGCSTGPAKQSPRQFQHGGTV*GQGLQV
Trigger: AACCTGCAGTCCCTGTCCTCAGACAGTGCCACCATG...CTGGAACTGCCGAGGACTCTGTTTGGCGGGGCCAGTCGAGCAGCCTGTGTGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR TCA 90 bp TTCCACACAGGCTGCTCGACTGGCCCCGCCAAACAGAGTCCTCGGCAGTTCCAGCTGATCTGCAAGATGTaGTGCCTCAGGCCCTCCCAC +
Preference number: 4 (lower is better)
Translates to: FHTGCSTGPAKQSPRQFQLICKM*CLRPSH
Trigger: GTGGGAGGGCCTGAGGCATCACATCTTGCAGATCAG...CTGGAACTGCCGAGGACTCTGTTTGGCGGGGCCAGTCGAGCAGCCTGTGTGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR GCA 90 bp GTGTGGGATGGGCATCCCCGCAGGCTCTTGGGTGCCATTCTCTGGGCCCTCCCCTTGTGCTCCTGTTCCTaGTGGTGGACAAAGTTCTCG +
Preference number: 4 (lower is better)
Translates to: VWDGHPRRLLGAILWALPLCSCS*WWTKFS
Trigger: CGAGAACTTTGTCCACCAGCAGGAACAGGAGCACAA...GGGGAGGGCCCAGAGAATGGCACCCAAGAGCCTGCGGGGATGCCCATCCCACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR GCA 90 bp GTGTGGGATGGGCATCCCCGCAGGCTCTTGGGTGCCATTCTCTGGGCCCTCCCCAGCAGGTTGTCGCTGTaGATCTTGGTTTTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: VWDGHPRRLLGAILWALPSRLSL*ILVLRQ
Trigger: CTGCCTCAAAACCAAGATGCACAGCGACAACCTGCT...GGGGAGGGCCCAGAGAATGGCACCCAAGAGCCTGCGGGGATGCCCATCCCACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR GCA 90 bp GTCATCGCTGAAGAAGGGTTTGTGCTCCTGTTCCTGCTGGTGGACAAAGTTCTCCCTGGGGCACCGCCCTaGTGCTGCAGCACCCCCGCA +
Preference number: 4 (lower is better)
Translates to: VIAEEGFVLLFLLVDKVLPGAPP*CCSTPA
Trigger: TGCGGGGGTGCTGCAGCAGCAGGGCGGTGCCCCAGG...GAGAACTTTGTCCACCAGCAGGAACAGGAGCACAAACCCTTCTTCAGCGATGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532623.5
CDS-3UTR GCA 90 bp TGGGATGGGCATCCCCGCAGGCTCTTGGGTGCCATTCTCTGGGCCCTCCCCCACTCTGAGGACAGGGACTaGAGGTTGTCCAAGTTGATG +
Preference number: 4 (lower is better)
Translates to: WDGHPRRLLGAILWALPHSEDRD*RLSKLM
Trigger: CATCAACTTGGACAACCTGCAGTCCCTGTCCTCAGA...GTGGGGGAGGGCCCAGAGAATGGCACCCAAGAGCCTGCGGGGATGCCCATCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR GCA 90 bp CTGGGGGACGCCTGTCCAGGTGGTGAGTGGAACGGTGTGTGTGTGTGTCTGTGTCAGTGCCATCTGGGCTaGCCGACTACTCCAGGGAGT +
Preference number: 4 (lower is better)
Translates to: LGDACPGGEWNGVCVCLCQCHLG*PTTPGS
Trigger: ACTCCCTGGAGTAGTCGGGCAGCCCAGATGGCACTG...ACACAGACACACACACACACCGTTCCACTCACCACCTGGACAGGCGTCCCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR GCA 90 bp AGGTTGTCCAAGTTGATGGAACCATCGGGGTTTGTCCCTGGGGCACCGCCCTGCCAGTGCCATCTGGGCTaGCCGACTACTCCAGGGAGT +
Preference number: 4 (lower is better)
Translates to: RLSKLMEPSGFVPGAPPCQCHLG*PTTPGS
Trigger: ACTCCCTGGAGTAGTCGGGCAGCCCAGATGGCACTG...GCAGGGCGGTGCCCCAGGGACAAACCCCGATGGTTCCATCAACTTGGACAACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532623.5
CDS-3UTR GCA 90 bp TTCCACACAGGCTGCTCGACTGGCCCCGCCAAACAGAGTCCTCGGCAGTTCCAGTCTGGCCACTGGTTATaGTTTGGGGCTCCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: FHTGCSTGPAKQSPRQFQSGHWL*FGAPSC
Trigger: GCAGGAGGGAGCCCCAAAGCATAACCAGTGGCCAGA...CTGGAACTGCCGAGGACTCTGTTTGGCGGGGCCAGTCGAGCAGCCTGTGTGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR CCA 90 bp CAGCCATGGGGTGAGAGGGAACCGGAGGAGAGGGTGCCAACCAAGGGGGTCTGGATGCACTCAGAGCCCTaGGTGGCCTGTTCACATTTC +
Preference number: 4 (lower is better)
Translates to: QPWGEREPEERVPTKGVWMHSEP*VACSHF
Trigger: GAAATGTGAACAGGCCACCCAGGGCTCTGAGTGCAT...CCAGACCCCCTTGGTTGGCACCCTCTCCTCCGGTTCCCTCTCACCCCATGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR CCA 90 bp CGACTGGCCCCGCCAAACAGAGTCCTCGGCAGTTCCAGGGAAGTGGGGCTGGGGTGCTCCTGTTCCTGCTaGTGGACAAAGTTCTCGATG +
Preference number: 4 (lower is better)
Translates to: RLAPPNRVLGSSREVGLGCSCSC*WTKFSM
Trigger: CATCGAGAACTTTGTCCACCAGCAGGAACAGGAGCA...CCCCAGCCCCACTTCCCTGGAACTGCCGAGGACTCTGTTTGGCGGGGCCAGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR CCA 90 bp GTGTGGGATGGGCATCCCCGCAGGCTCTTGGGTGCCATTCTCTGGGCCCTCCCCCAGATTGTCCAGTTCTaGGTCATCGCTGAAGAAGGG +
Preference number: 4 (lower is better)
Translates to: VWDGHPRRLLGAILWALPQIVQF*VIAEEG
Trigger: CCCTTCTTCAGCGATGACCCAGAACTGGACAATCTG...GGGGAGGGCCCAGAGAATGGCACCCAAGAGCCTGCGGGGATGCCCATCCCACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR CCA 90 bp AGGTTGTCCAAGTTGATGGAACCATCGGGGTTTGTCCCTGGGGCACCGCCCTGCGCTGCATGGCCATGGTaGCACTGTCTGAGGACAGGG +
Preference number: 4 (lower is better)
Translates to: RLSKLMEPSGFVPGAPPCAAWPW*HCLRTG
Trigger: CCCTGTCCTCAGACAGTGCCACCATGGCCATGCAGC...GCAGGGCGGTGCCCCAGGGACAAACCCCGATGGTTCCATCAACTTGGACAACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532623.5
CDS-3UTR CCA 90 bp GGGTCCCCTCCAGTTGAGCCAGGTAGCCACTCACATCCTGCCACTGAAGGAGGTAAGTCCTTCCGTGGGTaGGGGCCATGGGTGCCATCT +
Preference number: 4 (lower is better)
Translates to: GSPPVEPGSHSHPATEGGKSFRG*GPWVPS
Trigger: AGATGGCACCCATGGCCCCCACCCACGGAAGGACTT...ACCTCCTTCAGTGGCAGGATGTGAGTGGCTACCTGGCTCAACTGGAGGGGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR CCA 90 bp TGGGATGGGCATCCCCGCAGGCTCTTGGGTGCCATTCTCTGGGCCCTCCCCCACTTTCTCCCATGTCCATaGTTGCTGTGCGCAGAGACA +
Preference number: 4 (lower is better)
Translates to: WDGHPRRLLGAILWALPHFLPCP*LLCAET
Trigger: TGTCTCTGCGCACAGCAACCATGGACATGGGAGAAA...GTGGGGGAGGGCCCAGAGAATGGCACCCAAGAGCCTGCGGGGATGCCCATCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR CCA 90 bp TGTGTGGGATGGGCATCCCCGCAGGCTCTTGGGTGCCATTCTCTGGGCCCTCCCGTTCCTCCAGGGCTGTaGATAGCAGGGTTAGAACAG +
Preference number: 4 (lower is better)
Translates to: CVGWASPQALGCHSLGPPVPPGL*IAGLEQ
Trigger: CTGTTCTAACCCTGCTATCCACAGCCCTGGAGGAAC...GGGAGGGCCCAGAGAATGGCACCCAAGAGCCTGCGGGGATGCCCATCCCACACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR CCA 90 bp GATGGGCATCCCCGCAGGCTCTTGGGTGCCATTCTCTGGGCCCTCCCCCACATTGGGTATGTGTTAGGGTaGACAGTGGAGAGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: DGHPRRLLGAILWALPHIGYVLG*TVESLL
Trigger: GAGGAGGCTCTCCACTGTCCACCCTAACACATACCC...AATGTGGGGGAGGGCCCAGAGAATGGCACCCAAGAGCCTGCGGGGATGCCCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR CCA 90 bp GATGGGCATCCCCGCAGGCTCTTGGGTGCCATTCTCTGGGCCCTCCCCCACATTAGGGGGTCTGGAAGGTaGGTGGGAGGGTATGTGTTA +
Preference number: 4 (lower is better)
Translates to: DGHPRRLLGAILWALPHIRGSGR*VGGYVL
Trigger: TAACACATACCCTCCCACCCACCTTCCAGACCCCCT...AATGTGGGGGAGGGCCCAGAGAATGGCACCCAAGAGCCTGCGGGGATGCCCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR CAA 72 bp CAGCACCCCCGCAGCGATGGAGTTGGGCCAGAATCTTaGGGTGGGCCGGTGCTGAGACTTGATCTTCTTGGC +
Preference number: 4 (lower is better)
Translates to: QHPRSDGVGPES*GGPVLRLDLLG
Trigger: GCCAAGAAGATCAAGTCTCAGCACCGGCCCACCCAAAGATTCTGGCCCAACTCCATCGCTGCGGGGGTGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532623.5
CDS-3UTR TCA 90 bp GATGGGCATCCCCGCAGGCTCTTGGGTGCCATTCTCTGGGCCCTCCCCCACATTGTTCTGGGTCATCGCTaGAGAAGGGTTTGTGCTCCT +
Preference number: 4 (lower is better)
Translates to: DGHPRRLLGAILWALPHIVLGHR*RRVCAP
Trigger: AGGAGCACAAACCCTTCTTCAGCGATGACCCAGAAC...AATGTGGGGGAGGGCCCAGAGAATGGCACCCAAGAGCCTGCGGGGATGCCCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR TCA 90 bp TGTGTGGGATGGGCATCCCCGCAGGCTCTTGGGTGCCATTCTCTGGGCCCTCCCCTTTCTTCAAGCTACTaGTTTGGGGAAGCTAGGGCC +
Preference number: 4 (lower is better)
Translates to: CVGWASPQALGCHSLGPPLSSSY*FGEARA
Trigger: GGCCCTAGCTTCCCCAAATCAGTAGCTTGAAGAAAG...GGGAGGGCCCAGAGAATGGCACCCAAGAGCCTGCGGGGATGCCCATCCCACACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR TCA 90 bp GATGGGCATCCCCGCAGGCTCTTGGGTGCCATTCTCTGGGCCCTCCCCCACATTGAGACCTCGGAAGAGTaGCCATCCTTTTGCTCTACC +
Preference number: 4 (lower is better)
Translates to: DGHPRRLLGAILWALPHIETSEE*PSFCST
Trigger: GGTAGAGCAAAAGGATGGTCACTCTTCCGAGGTCTC...AATGTGGGGGAGGGCCCAGAGAATGGCACCCAAGAGCCTGCGGGGATGCCCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR GCA 90 bp TGCAGCACCCCCGCAGCGATGGAGTTGGGCCAGAATCTTTGGGTGGGCCGGTGCTCTGAGGACAGGGACTaGAGGTTGTCCAAGTTGATG +
Preference number: 4 (lower is better)
Translates to: CSTPAAMELGQNLWVGRCSEDRD*RLSKLM
Trigger: CATCAACTTGGACAACCTGCAGTCCCTGTCCTCAGA...GCACCGGCCCACCCAAAGATTCTGGCCCAACTCCATCGCTGCGGGGGTGCTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532623.5
CDS-3UTR CCA 90 bp TGTGTGGGATGGGCATCCCCGCAGGCTCTTGGGTGCCATTCTCTGGGCCCTCCCTGGAGACTCCGGACATaGAATTGGGGGAATTCTGCA +
Preference number: 4 (lower is better)
Translates to: CVGWASPQALGCHSLGPPWRLRT*NWGNSA
Trigger: TGCAGAATTCCCCCAATTCCATGTCCGGAGTCTCCA...GGGAGGGCCCAGAGAATGGCACCCAAGAGCCTGCGGGGATGCCCATCCCACACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR CCA 90 bp AGGTTGTCCAAGTTGATGGAACCATCGGGGTTTGTCCCTGGGGCACCGCCCTGCGGGACCACAATCCCCTaGGGGTTATTGGAGACTCCG +
Preference number: 4 (lower is better)
Translates to: RLSKLMEPSGFVPGAPPCGTTIP*GLLETP
Trigger: CGGAGTCTCCAATAACCCCCAGGGGATTGTGGTCCC...GCAGGGCGGTGCCCCAGGGACAAACCCCGATGGTTCCATCAACTTGGACAACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000532623.5
CDS-3UTR CCA 90 bp CAGCCATGGGGTGAGAGGGAACCGGAGGAGAGGGTGCCAACCAAGGGGGTCTGGACCATGGTAACCGGTTaGTATAAGGCTCCACCTGAC +
Preference number: 4 (lower is better)
Translates to: QPWGEREPEERVPTKGVWTMVTG*YKAPPD
Trigger: GTCAGGTGGAGCCTTATACCAACCGGTTACCATGGT...CCAGACCCCCTTGGTTGGCACCCTCTCCTCCGGTTCCCTCTCACCCCATGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR CCA 90 bp TGGGATGGGCATCCCCGCAGGCTCTTGGGTGCCATTCTCTGGGCCCTCCCCCACTATTGGTGGCATGCTTaGGCAAGACTCCTCGTTTGT +
Preference number: 4 (lower is better)
Translates to: WDGHPRRLLGAILWALPHYWWHA*ARLLVC
Trigger: ACAAACGAGGAGTCTTGCCCAAGCATGCCACCAATA...GTGGGGGAGGGCCCAGAGAATGGCACCCAAGAGCCTGCGGGGATGCCCATCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR CCA 90 bp TGTGTGGGATGGGCATCCCCGCAGGCTCTTGGGTGCCATTCTCTGGGCCCTCCCGGGTGCATGAGATGCTaGAAGAGCCAAGAACGCATT +
Preference number: 4 (lower is better)
Translates to: CVGWASPQALGCHSLGPPGCMRC*KSQERI
Trigger: AATGCGTTCTTGGCTCTTCCAGCATCTCATGCACCC...GGGAGGGCCCAGAGAATGGCACCCAAGAGCCTGCGGGGATGCCCATCCCACACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR CCA 90 bp GGGTCCCCTCCAGTTGAGCCAGGTAGCCACTCACATCCTGCCACTGAAGGAGGTGCACCCCCGCAGCGATaGAGTTGGGCCAGAATCTTT +
Preference number: 4 (lower is better)
Translates to: GSPPVEPGSHSHPATEGGAPPQR*SWARIF
Trigger: AAAGATTCTGGCCCAACTCCATCGCTGCGGGGGTGC...ACCTCCTTCAGTGGCAGGATGTGAGTGGCTACCTGGCTCAACTGGAGGGGACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR CCA 90 bp AGGTTGTCCAAGTTGATGGAACCATCGGGGTTTGTCCCTGGGGCACCGCCCTGCGCACCCCCGCAGCGATaGAGTTGGGCCAGAATCTTT +
Preference number: 4 (lower is better)
Translates to: RLSKLMEPSGFVPGAPPCAPPQR*SWARIF
Trigger: AAAGATTCTGGCCCAACTCCATCGCTGCGGGGGTGC...GCAGGGCGGTGCCCCAGGGACAAACCCCGATGGTTCCATCAACTTGGACAACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000532623.5
CDS-3UTR CCA 90 bp TGGCCACTGGTTATGCTTTGGGGCTCCCTCCTGCCCTTGAATGTCTGTCAAAGGATCGGGGTTTGTCCCTaGGGCACCGCCCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: WPLVMLWGSLLPLNVCQRIGVCP*GTALLL
Trigger: CAGCAGCAGGGCGGTGCCCCAGGGACAAACCCCGAT...CCTTTGACAGACATTCAAGGGCAGGAGGGAGCCCCAAAGCATAACCAGTGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR CCA 90 bp AGGTTGTCCAAGTTGATGGAACCATCGGGGTTTGTCCCTGGGGCACCGCCCTGCAAAAGAGGGTGCCTGTaGGCTGTCCTGGTAGGGTGG +
Preference number: 4 (lower is better)
Translates to: RLSKLMEPSGFVPGAPPCKRGCL*AVLVGW
Trigger: CCACCCTACCAGGACAGCCCACAGGCACCCTCTTTT...GCAGGGCGGTGCCCCAGGGACAAACCCCGATGGTTCCATCAACTTGGACAACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532623.5
CDS-3UTR TCA 90 bp GATGGGCATCCCCGCAGGCTCTTGGGTGCCATTCTCTGGGCCCTCCCCCACATTGCTCCAGACTTCACCTaGTGCCAATCTTCATCAGAC +
Preference number: 4 (lower is better)
Translates to: DGHPRRLLGAILWALPHIAPDFT*CQSSSD
Trigger: GTCTGATGAAGATTGGCATCAGGTGAAGTCTGGAGC...AATGTGGGGGAGGGCCCAGAGAATGGCACCCAAGAGCCTGCGGGGATGCCCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR TCA 90 bp CTGTGTTCCAAGCCCAGGTCGCTGACATTTGTCGTCTGCAGCTCGTCGACCTCCCTGCAGGAGGTCCTGTaGGTGAAGGTTGATGGAGGG +
Preference number: 4 (lower is better)
Translates to: LCSKPRSLTFVVCSSSTSLQEVL*VKVDGG
Trigger: CCCTCCATCAACCTTCACTCACAGGACCTCCTGCAG...GGAGGTCGACGAGCTGCAGACGACAAATGTCAGCGACCTGGGCTTGGAACACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532623.5
CDS-3UTR TCA 90 bp CAGCCATGGGGTGAGAGGGAACCGGAGGAGAGGGTGCCAACCAAGGGGGTCTGGACACAACTTGTGAGTTaGCGGTTGTCATGGCGATGT +
Preference number: 4 (lower is better)
Translates to: QPWGEREPEERVPTKGVWTQLVS*RLSWRC
Trigger: ACATCGCCATGACAACCGTCAACTCACAAGTTGTGT...CCAGACCCCCTTGGTTGGCACCCTCTCCTCCGGTTCCCTCTCACCCCATGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR TCA 90 bp CAGCCATGGGGTGAGAGGGAACCGGAGGAGAGGGTGCCAACCAAGGGGGTCTGGGTCTGTCAAAGGAGCTaGGAAACTTCTGGGGATGAA +
Preference number: 4 (lower is better)
Translates to: QPWGEREPEERVPTKGVWVCQRS*ETSGDE
Trigger: TTCATCCCCAGAAGTTTCTCAGCTCCTTTGACAGAC...CCAGACCCCCTTGGTTGGCACCCTCTCCTCCGGTTCCCTCTCACCCCATGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR TCA 90 bp GTGTGGGATGGGCATCCCCGCAGGCTCTTGGGTGCCATTCTCTGGGCCCTCCCCCCACATTTAGGATATTaGTGGGAAGAGGGATGTAGC +
Preference number: 4 (lower is better)
Translates to: VWDGHPRRLLGAILWALPPHLGY*WEEGCS
Trigger: GCTACATCCCTCTTCCCATCAATATCCTAAATGTGG...GGGGAGGGCCCAGAGAATGGCACCCAAGAGCCTGCGGGGATGCCCATCCCACAC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR GCA 90 bp GGGGGCAGGATCTGGGTTGCTGGCATCAAGCATGGGCTGCAGGATGCGCCTCCGTCTCAGGACCTGGATTaGCTTCACCATCAGATTGTC +
Preference number: 4 (lower is better)
Translates to: GGRIWVAGIKHGLQDAPPSQDLD*LHHQIV
Trigger: GACAATCTGATGGTGAAGGCAATCCAGGTCCTGAGA...CGGAGGCGCATCCTGCAGCCCATGCTTGATGCCAGCAACCCAGATCCTGCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532623.5
CDS-3UTR GCA 90 bp CTCAAAGTCACCTCCATATGGTTCCTAGCCCAGGGTCTGCCATCTCCTTGGCTCGCATCAAGCATGGGCTaGAGGATGCGCCTCCGGGCA +
Preference number: 4 (lower is better)
Translates to: LKVTSIWFLAQGLPSPWLASSMG*RMRLRA
Trigger: TGCCCGGAGGCGCATCCTGCAGCCCATGCTTGATGC...GAGCCAAGGAGATGGCAGACCCTGGGCTAGGAACCATATGGAGGTGACTTTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR GCA 90 bp GGCTGGGACCACAATCCCCTGGGGGTTATTGGAGACTCCGGACATGGAATTGGGGGGCAGGATCTGGGTTaGTGGCATCAAGCATGGGCT +
Preference number: 4 (lower is better)
Translates to: GWDHNPLGVIGDSGHGIGGQDLG*WHQAWA
Trigger: AGCCCATGCTTGATGCCAGCAACCCAGATCCTGCCC...CCCAATTCCATGTCCGGAGTCTCCAATAACCCCCAGGGGATTGTGGTCCCAGCC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000532623.5
CDS-3UTR GCA 90 bp CTGTGTTCCAAGCCCAGGTCGCTGACATTTGTCGTCTGCAGCTCGTCGACCTCCGCAGCCATCATAGCCTaGTGCATGGCCATGGTGGCA +
Preference number: 4 (lower is better)
Translates to: LCSKPRSLTFVVCSSSTSAAIIA*CMAMVA
Trigger: TGCCACCATGGCCATGCAGCAGGCTATGATGGCTGC...GGAGGTCGACGAGCTGCAGACGACAAATGTCAGCGACCTGGGCTTGGAACACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532623.5
CDS-3UTR GCA 90 bp CAGCCATGGGGTGAGAGGGAACCGGAGGAGAGGGTGCCAACCAAGGGGGTCTGGACCAATCTGCCTCAGTaGAGGGCTTGTAAACAACTC +
Preference number: 4 (lower is better)
Translates to: QPWGEREPEERVPTKGVWTNLPQ*RACKQL
Trigger: GAGTTGTTTACAAGCCCTGCACTGAGGCAGATTGGT...CCAGACCCCCTTGGTTGGCACCCTCTCCTCCGGTTCCCTCTCACCCCATGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR CCA 90 bp CCATCCAATGAGTCATCGTGTGCAGCCATCATAGCCTGCTGCATGGCCATGGTGGCTGTCCTGGTAGGGTaGGGGCGGGACATTCTGCGT +
Preference number: 4 (lower is better)
Translates to: PSNESSCAAIIACCMAMVAVLVG*GRDILR
Trigger: ACGCAGAATGTCCCGCCCCCACCCTACCAGGACAGC...CACCATGGCCATGCAGCAGGCTATGATGGCTGCACACGATGACTCATTGGATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532623.5
CDS-3UTR CCA 90 bp GGCTGGGACCACAATCCCCTGGGGGTTATTGGAGACTCCGGACATGGAATTGGGCCGCAGCGATGGAGTTaGGCCAGAATCTTTGGGTGG +
Preference number: 4 (lower is better)
Translates to: GWDHNPLGVIGDSGHGIGPQRWS*ARIFGW
Trigger: CCACCCAAAGATTCTGGCCCAACTCCATCGCTGCGG...CCCAATTCCATGTCCGGAGTCTCCAATAACCCCCAGGGGATTGTGGTCCCAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532623.5
CDS-3UTR CCA 90 bp CCATGGGGTGAGAGGGAACCGGAGGAGAGGGTGCCAACCAAGGGGGTCTGGAAGCTCATTGAAGCTCGGTaGTTGGGAAGGAACAGGTGT +
Preference number: 4 (lower is better)
Translates to: PWGEREPEERVPTKGVWKLIEAR*LGRNRC
Trigger: ACACCTGTTCCTTCCCAACCACCGAGCTTCAATGAG...CTTCCAGACCCCCTTGGTTGGCACCCTCTCCTCCGGTTCCCTCTCACCCCATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR TCA 90 bp CTGTGTTCCAAGCCCAGGTCGCTGACATTTGTCGTCTGCAGCTCGTCGACCTCCCCCCTAGATCATTCCTaGGCAGGTTGTCGCTGTGCA +
Preference number: 4 (lower is better)
Translates to: LCSKPRSLTFVVCSSSTSPLDHS*AGCRCA
Trigger: TGCACAGCGACAACCTGCTCAGGAATGATCTAGGGG...GGAGGTCGACGAGCTGCAGACGACAAATGTCAGCGACCTGGGCTTGGAACACAG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000532623.5
CDS-3UTR TCA 90 bp GGGTCCCCTCCAGTTGAGCCAGGTAGCCACTCACATCCTGCCACTGAAGGAGGTTCCTCAGGGATTTGGTaGGTCCAGATCTCACTCCTG +
Preference number: 4 (lower is better)
Translates to: GSPPVEPGSHSHPATEGGSSGIW*VQISLL
Trigger: CAGGAGTGAGATCTGGACTCACCAAATCCCTGAGGA...ACCTCCTTCAGTGGCAGGATGTGAGTGGCTACCTGGCTCAACTGGAGGGGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR TCA 90 bp GTGTGTCCGTGCTGGGGGACGCCTGTCCAGGTGGTGAGTGGAACGGTGTGTGTGTGGAAAACACACGTGTaGCCTGTCCTGTCATTCACA +
Preference number: 4 (lower is better)
Translates to: VCPCWGTPVQVVSGTVCVWKTHV*PVLSFT
Trigger: TGTGAATGACAGGACAGGTCACACGTGTGTTTTCCA...CACACACACCGTTCCACTCACCACCTGGACAGGCGTCCCCCAGCACGGACACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR GCA 90 bp TTCCACACAGGCTGCTCGACTGGCCCCGCCAAACAGAGTCCTCGGCAGTTCCAGAAGCCTCAGAAGTCCTaGTCCAGACTTCACCTGATG +
Preference number: 4 (lower is better)
Translates to: FHTGCSTGPAKQSPRQFQKPQKS*SRLHLM
Trigger: CATCAGGTGAAGTCTGGAGCAGGACTTCTGAGGCTT...CTGGAACTGCCGAGGACTCTGTTTGGCGGGGCCAGTCGAGCAGCCTGTGTGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR GCA 90 bp TCTTTGGGTGGGCCGGTGCTGAGACTTGATCTTCTTGGCTTTGGGGGCAGGATCTTGTCATGGCGATGTTaGCCTGCTGGAGCGCTGAGG +
Preference number: 4 (lower is better)
Translates to: SLGGPVLRLDLLGFGGRILSWRC*PAGALR
Trigger: CCTCAGCGCTCCAGCAGGGCAACATCGCCATGACAA...GATCCTGCCCCCAAAGCCAAGAAGATCAAGTCTCAGCACCGGCCCACCCAAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532623.5
CDS-3UTR GCA 90 bp GGCTGGGACCACAATCCCCTGGGGGTTATTGGAGACTCCGGACATGGAATTGGGGCGACACTCCTCTCCTaGTCAGTGATCAGTGCCATC +
Preference number: 4 (lower is better)
Translates to: GWDHNPLGVIGDSGHGIGATLLS*SVISAI
Trigger: GATGGCACTGATCACTGAGCAGGAGAGGAGTGTCGC...CCCAATTCCATGTCCGGAGTCTCCAATAACCCCCAGGGGATTGTGGTCCCAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000532623.5
CDS-3UTR CCA 90 bp CCATCCAATGAGTCATCGTGTGCAGCCATCATAGCCTGCTGCATGGCCATGGTGCGTCAGAGCGGGGGCTaGGGAGGCATGTTGCATCAT +
Preference number: 4 (lower is better)
Translates to: PSNESSCAAIIACCMAMVRQSGG*GGMLHH
Trigger: ATGATGCAACATGCCTCCCCAGCCCCCGCTCTGACG...CACCATGGCCATGCAGCAGGCTATGATGGCTGCACACGATGACTCATTGGATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532623.5
CDS-3UTR CCA 90 bp GATGGGCATCCCCGCAGGCTCTTGGGTGCCATTCTCTGGGCCCTCCCCCACATTTGGATTCTCAGGACCTaGATTGCCTTCACCATCAGA +
Preference number: 4 (lower is better)
Translates to: DGHPRRLLGAILWALPHIWILRT*IAFTIR
Trigger: TCTGATGGTGAAGGCAATCCAGGTCCTGAGAATCCA...AATGTGGGGGAGGGCCCAGAGAATGGCACCCAAGAGCCTGCGGGGATGCCCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR CCA 90 bp AGGTTGTCCAAGTTGATGGAACCATCGGGGTTTGTCCCTGGGGCACCGCCCTGCTTTGGGGGCAGGATCTaGGTTGCTGGCATCAAGCAT +
Preference number: 4 (lower is better)
Translates to: RLSKLMEPSGFVPGAPPCFGGRI*VAGIKH
Trigger: ATGCTTGATGCCAGCAACCCAGATCCTGCCCCCAAA...GCAGGGCGGTGCCCCAGGGACAAACCCCGATGGTTCCATCAACTTGGACAACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000532623.5
CDS-3UTR CCA 90 bp GGAGGTGAGGTCAAGGTTAACCTGTGTGTTCTGGATCTGGATGGCTCCCTGGGGCCTGCTGCATGGCCATaGTGGCACTGTCTGAGGACA +
Preference number: 4 (lower is better)
Translates to: GGEVKVNLCVLDLDGSLGPAAWP*WHCLRT
Trigger: TGTCCTCAGACAGTGCCACCATGGCCATGCAGCAGG...CCCCAGGGAGCCATCCAGATCCAGAACACACAGGTTAACCTTGACCTCACCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532623.5
CDS-3UTR CCA 90 bp CGACTGGCCCCGCCAAACAGAGTCCTCGGCAGTTCCAGGGAAGTGGGGCTGGGGTCAGTACTGGTTTGGTaGATACATCAGAAGGAGGTT +
Preference number: 4 (lower is better)
Translates to: RLAPPNRVLGSSREVGLGSVLVW*IHQKEV
Trigger: AACCTCCTTCTGATGTATCCACCAAACCAGTACTGA...CCCCAGCCCCACTTCCCTGGAACTGCCGAGGACTCTGTTTGGCGGGGCCAGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR TCA 90 bp GATGGGCATCCCCGCAGGCTCTTGGGTGCCATTCTCTGGGCCCTCCCCCACATTGTTGCATCATGGGATTaGTTCACATGGAGGACTGTT +
Preference number: 4 (lower is better)
Translates to: DGHPRRLLGAILWALPHIVASWD*FTWRTV
Trigger: AACAGTCCTCCATGTGAATCAATCCCATGATGCAAC...AATGTGGGGGAGGGCCCAGAGAATGGCACCCAAGAGCCTGCGGGGATGCCCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR TCA 90 bp ACAAAGTTCTCGATGTCCACATCAAAGCTGGCGGAGGTGATGCACTCAGAGCCCCCTGTGAGTGAAGGTTaGTGGAGGGCTGGTTGGGGG +
Preference number: 4 (lower is better)
Translates to: TKFSMSTSKLAEVMHSEPPVSEG*WRAGWG
Trigger: CCCCCAACCAGCCCTCCATCAACCTTCACTCACAGG...GGGCTCTGAGTGCATCACCTCCGCCAGCTTTGATGTGGACATCGAGAACTTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532623.5
CDS-3UTR TCA 90 bp CTCAAAGTCACCTCCATATGGTTCCTAGCCCAGGGTCTGCCATCTCCTTGGCTCAGGAGGTCCTGTGAGTaGAGGTTGATGGAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: LKVTSIWFLAQGLPSPWLRRSCE*RLMEGW
Trigger: CCAGCCCTCCATCAACCTTCACTCACAGGACCTCCT...GAGCCAAGGAGATGGCAGACCCTGGGCTAGGAACCATATGGAGGTGACTTTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR TCA 90 bp CGACTGGCCCCGCCAAACAGAGTCCTCGGCAGTTCCAGGGAAGTGGGGCTGGGGGGTAATAAGATTTACTaGAAACGTCTCGGCCACATT +
Preference number: 4 (lower is better)
Translates to: RLAPPNRVLGSSREVGLGGNKIY*KRLGHI
Trigger: AATGTGGCCGAGACGTTTTCAGTAAATCTTATTACC...CCCCAGCCCCACTTCCCTGGAACTGCCGAGGACTCTGTTTGGCGGGGCCAGTCG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR GCA 90 bp ACAAAGTTCTCGATGTCCACATCAAAGCTGGCGGAGGTGATGCACTCAGAGCCCGGGGGCGGGACATTCTaGGTGGCCATCATCGTCAGA +
Preference number: 4 (lower is better)
Translates to: TKFSMSTSKLAEVMHSEPGGGTF*VAIIVR
Trigger: TCTGACGATGATGGCCACGCAGAATGTCCCGCCCCC...GGGCTCTGAGTGCATCACCTCCGCCAGCTTTGATGTGGACATCGAGAACTTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532623.5
CDS-3UTR GCA 90 bp TTCCTGCTGGTGGACAAAGTTCTCGATGTCCACATCAAAGCTGGCGGAGGTGATGGCTCCCTGGGGGATTaGTTGGGTGACCACCTGACC +
Preference number: 4 (lower is better)
Translates to: FLLVDKVLDVHIKAGGGDGSLGD*LGDHLT
Trigger: GGTCAGGTGGTCACCCAAGCAATCCCCCAGGGAGCC...ATCACCTCCGCCAGCTTTGATGTGGACATCGAGAACTTTGTCCACCAGCAGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532623.5
CDS-3UTR GCA 90 bp CTCAAAGTCACCTCCATATGGTTCCTAGCCCAGGGTCTGCCATCTCCTTGGCTCGCAGCCATCATAGCCTaGTGCATGGCCATGGTGGCA +
Preference number: 4 (lower is better)
Translates to: LKVTSIWFLAQGLPSPWLAAIIA*CMAMVA
Trigger: TGCCACCATGGCCATGCAGCAGGCTATGATGGCTGC...GAGCCAAGGAGATGGCAGACCCTGGGCTAGGAACCATATGGAGGTGACTTTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR GCA 90 bp GCCATCTATCCTCAGGGATTTGGTGAGTCCAGATCTCACTCCTGTCTTTCCACAGTGCCAGTGTGTCCGTaGTGGGGGACGCCTGTCCAG +
Preference number: 4 (lower is better)
Translates to: AIYPQGFGESRSHSCLSTVPVCP*WGTPVQ
Trigger: CTGGACAGGCGTCCCCCAGCACGGACACACTGGCAC...TGTGGAAAGACAGGAGTGAGATCTGGACTCACCAAATCCCTGAGGATAGATGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR CCA 90 bp GTGTGTCCGTGCTGGGGGACGCCTGTCCAGGTGGTGAGTGGAACGGTGTGTGTGCTTTCTACTTCCAGCTaGGCCAGAATTTCTTCCTGT +
Preference number: 4 (lower is better)
Translates to: VCPCWGTPVQVVSGTVCVLSTSS*ARISSC
Trigger: ACAGGAAGAAATTCTGGCCCAGCTGGAAGTAGAAAG...CACACACACCGTTCCACTCACCACCTGGACAGGCGTCCCCCAGCACGGACACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR CCA 90 bp GTGTGGGATGGGCATCCCCGCAGGCTCTTGGGTGCCATTCTCTGGGCCCTCCCCCTCCTCGTTTGTTCTTaGACTTCTTATCCTCATTGT +
Preference number: 4 (lower is better)
Translates to: VWDGHPRRLLGAILWALPLLVCS*TSYPHC
Trigger: ACAATGAGGATAAGAAGTCCAAGAACAAACGAGGAG...GGGGAGGGCCCAGAGAATGGCACCCAAGAGCCTGCGGGGATGCCCATCCCACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR CCA 90 bp TGCAGCACCCCCGCAGCGATGGAGTTGGGCCAGAATCTTTGGGTGGGCCGGTGCAAGAACGCATTATATTaGTGGCATGCTTGGGCAAGA +
Preference number: 4 (lower is better)
Translates to: CSTPAAMELGQNLWVGRCKNALY*WHAWAR
Trigger: TCTTGCCCAAGCATGCCACCAATATAATGCGTTCTT...GCACCGGCCCACCCAAAGATTCTGGCCCAACTCCATCGCTGCGGGGGTGCTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532623.5
CDS-3UTR CCA 90 bp AGGTTGTCCAAGTTGATGGAACCATCGGGGTTTGTCCCTGGGGCACCGCCCTGCGGGTGCATGAGATGCTaGAAGAGCCAAGAACGCATT +
Preference number: 4 (lower is better)
Translates to: RLSKLMEPSGFVPGAPPCGCMRC*KSQERI
Trigger: AATGCGTTCTTGGCTCTTCCAGCATCTCATGCACCC...GCAGGGCGGTGCCCCAGGGACAAACCCCGATGGTTCCATCAACTTGGACAACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532623.5
CDS-3UTR CCA 90 bp TGGCCACTGGTTATGCTTTGGGGCTCCCTCCTGCCCTTGAATGTCTGTCAAAGGCCGCAGCGATGGAGTTaGGCCAGAATCTTTGGGTGG +
Preference number: 4 (lower is better)
Translates to: WPLVMLWGSLLPLNVCQRPQRWS*ARIFGW
Trigger: CCACCCAAAGATTCTGGCCCAACTCCATCGCTGCGG...CCTTTGACAGACATTCAAGGGCAGGAGGGAGCCCCAAAGCATAACCAGTGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR CCA 90 bp TGGCCACTGGTTATGCTTTGGGGCTCCCTCCTGCCCTTGAATGTCTGTCAAAGGCCTGCTGCATGGCCATaGTGGCACTGTCTGAGGACA +
Preference number: 4 (lower is better)
Translates to: WPLVMLWGSLLPLNVCQRPAAWP*WHCLRT
Trigger: TGTCCTCAGACAGTGCCACCATGGCCATGCAGCAGG...CCTTTGACAGACATTCAAGGGCAGGAGGGAGCCCCAAAGCATAACCAGTGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR CCA 90 bp GGGTCCCCTCCAGTTGAGCCAGGTAGCCACTCACATCCTGCCACTGAAGGAGGTAAAGTCACCTCCATATaGTTCCTAGCCCAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: GSPPVEPGSHSHPATEGGKVTSI*FLAQGL
Trigger: CAGACCCTGGGCTAGGAACCATATGGAGGTGACTTT...ACCTCCTTCAGTGGCAGGATGTGAGTGGCTACCTGGCTCAACTGGAGGGGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR CCA 90 bp CTGAAGGTCTATGGAGGGCGTGGAGCACTGAAGGTGGGAACATCTAGGGTAAAAGCAAAGGGATGGCCGTaGCGACCTGCGGGCTGGAAA +
Preference number: 4 (lower is better)
Translates to: LKVYGGRGALKVGTSRVKAKGWP*RPAGWK
Trigger: TTTCCAGCCCGCAGGTCGCCACGGCCATCCCTTTGC...TTTTACCCTAGATGTTCCCACCTTCAGTGCTCCACGCCCTCCATAGACCTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR CAA 72 bp GACACAACTTGTGAGTTGACGGTTGTCATGGCGATGTaGCCCTGCTGGAGCGCTGAGGCTGGGACCACAATC +
Preference number: 4 (lower is better)
Translates to: DTTCELTVVMAM*PCWSAEAGTTI
Trigger: GATTGTGGTCCCAGCCTCAGCGCTCCAGCAGGGCAACATCGCCATGACAACCGTCAACTCACAAGTTGTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532623.5
3UTR CAA 72 bp GCCATGGTGGCACTGTCTGAGGACAGGGACTGCAGGTaGTCCAAGTTGATGGAACCATCGGGGTTTGTCCCT +
Preference number: 4 (lower is better)
Translates to: AMVALSEDRDCR*SKLMEPSGFVP
Trigger: AGGGACAAACCCCGATGGTTCCATCAACTTGGACAACCTGCAGTCCCTGTCCTCAGACAGTGCCACCATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532623.5
CDS-3UTR TCA 90 bp TCAAGGTTAACCTGTGTGTTCTGGATCTGGATGGCTCCCTGGGGGATTGCTTGGAGGAGGTCCTGTGAGTaGAGGTTGATGGAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: SRLTCVFWIWMAPWGIAWRRSCE*RLMEGW
Trigger: CCAGCCCTCCATCAACCTTCACTCACAGGACCTCCT...CCAAGCAATCCCCCAGGGAGCCATCCAGATCCAGAACACACAGGTTAACCTTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532623.5
CDS-3UTR TCA 90 bp AAGGTTAACCTGTGTGTTCTGGATCTGGATGGCTCCCTGGGGGATTGCTTGGGTTTACTTGCAGGAGGGTaGGGTTGGTCTGGGCTGCGA +
Preference number: 4 (lower is better)
Translates to: KVNLCVLDLDGSLGDCLGLLAGG*GWSGLR
Trigger: TCGCAGCCCAGACCAACCTCACCCTCCTGCAAGTAA...ACCCAAGCAATCCCCCAGGGAGCCATCCAGATCCAGAACACACAGGTTAACCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532623.5
CDS-3UTR TCA 90 bp AAGGTTAACCTGTGTGTTCTGGATCTGGATGGCTCCCTGGGGGATTGCTTGGGTTGGGTGGGCCGGTGCTaGGACTTGATCTTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: KVNLCVLDLDGSLGDCLGWVGRC*DLIFLA
Trigger: AGCCAAGAAGATCAAGTCTCAGCACCGGCCCACCCA...ACCCAAGCAATCCCCCAGGGAGCCATCCAGATCCAGAACACACAGGTTAACCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532623.5
CDS-3UTR TCA 90 bp CTGTGTTCCAAGCCCAGGTCGCTGACATTTGTCGTCTGCAGCTCGTCGACCTCCTTCTGTCCCATCCAATaGGTCATCGTGTGCAGCCAT +
Preference number: 4 (lower is better)
Translates to: LCSKPRSLTFVVCSSSTSFCPIQ*VIVCSH
Trigger: ATGGCTGCACACGATGACTCATTGGATGGGACAGAA...GGAGGTCGACGAGCTGCAGACGACAAATGTCAGCGACCTGGGCTTGGAACACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532623.5
CDS-3UTR TCA 90 bp GGGTCCCCTCCAGTTGAGCCAGGTAGCCACTCACATCCTGCCACTGAAGGAGGTAGAAACTTCTGGGGATaGAACTCAGTCCCCCTTTGT +
Preference number: 4 (lower is better)
Translates to: GSPPVEPGSHSHPATEGGRNFWG*NSVPLC
Trigger: ACAAAGGGGGACTGAGTTTCATCCCCAGAAGTTTCT...ACCTCCTTCAGTGGCAGGATGTGAGTGGCTACCTGGCTCAACTGGAGGGGACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR TCA 90 bp TGGCCACTGGTTATGCTTTGGGGCTCCCTCCTGCCCTTGAATGTCTGTCAAAGGGCTCCCTCCTGCCCTTaGATGTCTGTCAAAGGAGCT +
Preference number: 4 (lower is better)
Translates to: WPLVMLWGSLLPLNVCQRAPSCP*MSVKGA
Trigger: AGCTCCTTTGACAGACATTCAAGGGCAGGAGGGAGC...CCTTTGACAGACATTCAAGGGCAGGAGGGAGCCCCAAAGCATAACCAGTGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR TCA 90 bp CTGGGGGACGCCTGTCCAGGTGGTGAGTGGAACGGTGTGTGTGTGTGTCTGTGTGATTCCATCCCATTCTaGTCTGCAAGATGTGATGCC +
Preference number: 4 (lower is better)
Translates to: LGDACPGGEWNGVCVCLCDSIPF*SARCDA
Trigger: GGCATCACATCTTGCAGATCAGAATGGGATGGAATC...ACACAGACACACACACACACCGTTCCACTCACCACCTGGACAGGCGTCCCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR TCA 90 bp CTGAAGGTCTATGGAGGGCGTGGAGCACTGAAGGTGGGAACATCTAGGGTAAAACGCCTGTCCAGGTGGTaGGTGGAACGGTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: LKVYGGRGALKVGTSRVKRLSRW*VERCVC
Trigger: ACACACACACCGTTCCACTCACCACCTGGACAGGCG...TTTTACCCTAGATGTTCCCACCTTCAGTGCTCCACGCCCTCCATAGACCTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR GCA 90 bp GGGTCCCCTCCAGTTGAGCCAGGTAGCCACTCACATCCTGCCACTGAAGGAGGTTCTCAGGACCTGGATTaGCTTCACCATCAGATTGTC +
Preference number: 4 (lower is better)
Translates to: GSPPVEPGSHSHPATEGGSQDLD*LHHQIV
Trigger: GACAATCTGATGGTGAAGGCAATCCAGGTCCTGAGA...ACCTCCTTCAGTGGCAGGATGTGAGTGGCTACCTGGCTCAACTGGAGGGGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR GCA 90 bp ACAAAGTTCTCGATGTCCACATCAAAGCTGGCGGAGGTGATGCACTCAGAGCCCGTCTGGGCTGCGATCTaGCTCTTCTCATCCTCCGTG +
Preference number: 4 (lower is better)
Translates to: TKFSMSTSKLAEVMHSEPVWAAI*LFSSSV
Trigger: CACGGAGGATGAGAAGAGGCAGATCGCAGCCCAGAC...GGGCTCTGAGTGCATCACCTCCGCCAGCTTTGATGTGGACATCGAGAACTTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532623.5
CDS-3UTR GCA 90 bp CTGAAGGTCTATGGAGGGCGTGGAGCACTGAAGGTGGGAACATCTAGGGTAAAAAACCGGAGGAGAGGGTaGCAACCAAGGGGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: LKVYGGRGALKVGTSRVKNRRRG*QPRGSG
Trigger: TCCAGACCCCCTTGGTTGGCACCCTCTCCTCCGGTT...TTTTACCCTAGATGTTCCCACCTTCAGTGCTCCACGCCCTCCATAGACCTTCAG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR GCA 90 bp TCAAGGTTAACCTGTGTGTTCTGGATCTGGATGGCTCCCTGGGGGATTGCTTGGAGCGGGAAAAGAGGGTaGCTGTGGGCTGTCCTGGTA +
Preference number: 4 (lower is better)
Translates to: SRLTCVFWIWMAPWGIAWSGKRG*LWAVLV
Trigger: TACCAGGACAGCCCACAGGCACCCTCTTTTCCCGCT...CCAAGCAATCCCCCAGGGAGCCATCCAGATCCAGAACACACAGGTTAACCTTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532623.5
CDS-3UTR CCA 90 bp TCAAGGTTAACCTGTGTGTTCTGGATCTGGATGGCTCCCTGGGGGATTGCTTGGATCTGGATGGCTCCCTaGGGGATTGCTTGGGTGACC +
Preference number: 4 (lower is better)
Translates to: SRLTCVFWIWMAPWGIAWIWMAP*GIAWVT
Trigger: GGTCACCCAAGCAATCCCCCAGGGAGCCATCCAGAT...CCAAGCAATCCCCCAGGGAGCCATCCAGATCCAGAACACACAGGTTAACCTTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532623.5
CDS-3UTR CCA 90 bp GGGTCCCCTCCAGTTGAGCCAGGTAGCCACTCACATCCTGCCACTGAAGGAGGTCCACCAGCTTACAGTTaGTTTCCAGGAGAGAGTGAA +
Preference number: 4 (lower is better)
Translates to: GSPPVEPGSHSHPATEGGPPAYS*FPGESE
Trigger: TTCACTCTCTCCTGGAAACCAACTGTAAGCTGGTGG...ACCTCCTTCAGTGGCAGGATGTGAGTGGCTACCTGGCTCAACTGGAGGGGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR CCA 90 bp TGGCCACTGGTTATGCTTTGGGGCTCCCTCCTGCCCTTGAATGTCTGTCAAAGGGGTCTGCCATCTCCTTaGCTCTTGGAGTCAACCCAG +
Preference number: 4 (lower is better)
Translates to: WPLVMLWGSLLPLNVCQRGLPSP*LLESTQ
Trigger: CTGGGTTGACTCCAAGAGCCAAGGAGATGGCAGACC...CCTTTGACAGACATTCAAGGGCAGGAGGGAGCCCCAAAGCATAACCAGTGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR CCA 90 bp TGGCCACTGGTTATGCTTTGGGGCTCCCTCCTGCCCTTGAATGTCTGTCAAAGGTGGCGACCTGCGGGCTaGAAAGATTCCCAGATAACC +
Preference number: 4 (lower is better)
Translates to: WPLVMLWGSLLPLNVCQRWRPAG*KDSQIT
Trigger: GGTTATCTGGGAATCTTTCCAGCCCGCAGGTCGCCA...CCTTTGACAGACATTCAAGGGCAGGAGGGAGCCCCAAAGCATAACCAGTGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR TCA 90 bp TCTTTGGGTGGGCCGGTGCTGAGACTTGATCTTCTTGGCTTTGGGGGCAGGATCGCTCCAGACTTCACCTaGTGCCAATCTTCATCAGAC +
Preference number: 4 (lower is better)
Translates to: SLGGPVLRLDLLGFGGRIAPDFT*CQSSSD
Trigger: GTCTGATGAAGATTGGCATCAGGTGAAGTCTGGAGC...GATCCTGCCCCCAAAGCCAAGAAGATCAAGTCTCAGCACCGGCCCACCCAAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532623.5
CDS-3UTR TCA 90 bp TTCTGTGATCACCTAGGGACAGCTGTGGCCTCAAAGTCACCTCCATATGGTTCCCTGCAGGAGGTCCTGTaGGTGAAGGTTGATGGAGGG +
Preference number: 4 (lower is better)
Translates to: FCDHLGTAVASKSPPYGSLQEVL*VKVDGG
Trigger: CCCTCCATCAACCTTCACTCACAGGACCTCCTGCAG...GGAACCATATGGAGGTGACTTTGAGGCCACAGCTGTCCCTAGGTGATCACAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR TCA 90 bp CCATCCAATGAGTCATCGTGTGCAGCCATCATAGCCTGCTGCATGGCCATGGTGGCAGGTTGTCCAAGTTaGTGGAACCATCGGGGTTTG +
Preference number: 4 (lower is better)
Translates to: PSNESSCAAIIACCMAMVAGCPS*WNHRGL
Trigger: CAAACCCCGATGGTTCCATCAACTTGGACAACCTGC...CACCATGGCCATGCAGCAGGCTATGATGGCTGCACACGATGACTCATTGGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532623.5
CDS-3UTR TCA 90 bp GTCATCGCTGAAGAAGGGTTTGTGCTCCTGTTCCTGCTGGTGGACAAAGTTCTCTCCTCTCCTGCTCAGTaGTCAGTGCCATCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: VIAEEGFVLLFLLVDKVLSSPAQ*SVPSGL
Trigger: CAGCCCAGATGGCACTGATCACTGAGCAGGAGAGGA...GAGAACTTTGTCCACCAGCAGGAACAGGAGCACAAACCCTTCTTCAGCGATGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532623.5
CDS-3UTR TCA 90 bp TCTTTGGGTGGGCCGGTGCTGAGACTTGATCTTCTTGGCTTTGGGGGCAGGATCCTTTCTTCAAGCTACTaGTTTGGGGAAGCTAGGGCC +
Preference number: 4 (lower is better)
Translates to: SLGGPVLRLDLLGFGGRILSSSY*FGEARA
Trigger: GGCCCTAGCTTCCCCAAATCAGTAGCTTGAAGAAAG...GATCCTGCCCCCAAAGCCAAGAAGATCAAGTCTCAGCACCGGCCCACCCAAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532623.5
CDS-3UTR TCA 90 bp CTGAAGGTCTATGGAGGGCGTGGAGCACTGAAGGTGGGAACATCTAGGGTAAAAGTTTCCAGGAGAGAGTaGAGGGCACTGTGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: LKVYGGRGALKVGTSRVKVSRRE*RALWLP
Trigger: TGGGAGCCACAGTGCCCTTCACTCTCTCCTGGAAAC...TTTTACCCTAGATGTTCCCACCTTCAGTGCTCCACGCCCTCCATAGACCTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR GCA 90 bp TGGCCACTGGTTATGCTTTGGGGCTCCCTCCTGCCCTTGAATGTCTGTCAAAGGCTGAAGAAGGGTTTGTaGTCCTGTTCCTGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: WPLVMLWGSLLPLNVCQRLKKGL*SCSCWW
Trigger: CCACCAGCAGGAACAGGAGCACAAACCCTTCTTCAG...CCTTTGACAGACATTCAAGGGCAGGAGGGAGCCCCAAAGCATAACCAGTGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR GCA 90 bp CTGAAGGTCTATGGAGGGCGTGGAGCACTGAAGGTGGGAACATCTAGGGTAAAATTGTCATGGCGATGTTaGCCTGCTGGAGCGCTGAGG +
Preference number: 4 (lower is better)
Translates to: LKVYGGRGALKVGTSRVKLSWRC*PAGALR
Trigger: CCTCAGCGCTCCAGCAGGGCAACATCGCCATGACAA...TTTTACCCTAGATGTTCCCACCTTCAGTGCTCCACGCCCTCCATAGACCTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR GCA 90 bp TGGCCACTGGTTATGCTTTGGGGCTCCCTCCTGCCCTTGAATGTCTGTCAAAGGCGAACAGCACCAATCTaGCTCAGTGCAGGGCTTGTA +
Preference number: 4 (lower is better)
Translates to: WPLVMLWGSLLPLNVCQRRTAPI*LSAGLV
Trigger: TACAAGCCCTGCACTGAGGCAGATTGGTGCTGTTCG...CCTTTGACAGACATTCAAGGGCAGGAGGGAGCCCCAAAGCATAACCAGTGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR CCA 90 bp ATACATTCATTTCAGGGAGACCTCGGAAGAGTGACCATCCTTTTGCTCTACCCCGAGATGTGGACAGCCTaGGCCTTGGAGGGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: IHSFQGDLGRVTILLLYPEMWTA*ALEGGW
Trigger: CCAGCCACCCTCCAAGGCCCAGGCTGTCCACATCTC...GGGGTAGAGCAAAAGGATGGTCACTCTTCCGAGGTCTCCCTGAAATGAATGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR CCA 90 bp ATACATTCATTTCAGGGAGACCTCGGAAGAGTGACCATCCTTTTGCTCTACCCCGAGGGGGCAGAGATGTaGACAGCCTGGGCCTTGGAG +
Preference number: 4 (lower is better)
Translates to: IHSFQGDLGRVTILLLYPEGAEM*TAWALE
Trigger: CTCCAAGGCCCAGGCTGTCCACATCTCTGCCCCCTC...GGGGTAGAGCAAAAGGATGGTCACTCTTCCGAGGTCTCCCTGAAATGAATGTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR CCA 90 bp GGAGGTGAGGTCAAGGTTAACCTGTGTGTTCTGGATCTGGATGGCTCCCTGGGGTGCTCCTGTTCCTGCTaGTGGACAAAGTTCTCGATG +
Preference number: 4 (lower is better)
Translates to: GGEVKVNLCVLDLDGSLGCSCSC*WTKFSM
Trigger: CATCGAGAACTTTGTCCACCAGCAGGAACAGGAGCA...CCCCAGGGAGCCATCCAGATCCAGAACACACAGGTTAACCTTGACCTCACCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532623.5
CDS-3UTR CCA 90 bp CTCAAAGTCACCTCCATATGGTTCCTAGCCCAGGGTCTGCCATCTCCTTGGCTCCTCCGGACATGGAATTaGGGGAATTCTGCAGGAGGT +
Preference number: 4 (lower is better)
Translates to: LKVTSIWFLAQGLPSPWLLRTWN*GNSAGG
Trigger: ACCTCCTGCAGAATTCCCCCAATTCCATGTCCGGAG...GAGCCAAGGAGATGGCAGACCCTGGGCTAGGAACCATATGGAGGTGACTTTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR CCA 90 bp CCATCCAATGAGTCATCGTGTGCAGCCATCATAGCCTGCTGCATGGCCATGGTGCTCCGGACATGGAATTaGGGGAATTCTGCAGGAGGT +
Preference number: 4 (lower is better)
Translates to: PSNESSCAAIIACCMAMVLRTWN*GNSAGG
Trigger: ACCTCCTGCAGAATTCCCCCAATTCCATGTCCGGAG...CACCATGGCCATGCAGCAGGCTATGATGGCTGCACACGATGACTCATTGGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532623.5
CDS-3UTR CCA 90 bp ACTCCTCGTTTGTTCTTGGACTTCTTATCCTCATTGTCCAGGAGGGAGGTGAGGTGCTGGCATCAAGCATaGGCTGCAGGATGCGCCTCC +
Preference number: 4 (lower is better)
Translates to: TPRLFLDFLSSLSRREVRCWHQA*AAGCAS
Trigger: GGAGGCGCATCCTGCAGCCCATGCTTGATGCCAGCA...CCTCACCTCCCTCCTGGACAATGAGGATAAGAAGTCCAAGAACAAACGAGGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532623.5
CDS-3UTR CCA 90 bp ATACATTCATTTCAGGGAGACCTCGGAAGAGTGACCATCCTTTTGCTCTACCCCCACAGGCTGCTCGACTaGCCCCGCCAAACAGAGTCC +
Preference number: 4 (lower is better)
Translates to: IHSFQGDLGRVTILLLYPHRLLD*PRQTES
Trigger: GGACTCTGTTTGGCGGGGCCAGTCGAGCAGCCTGTG...GGGGTAGAGCAAAAGGATGGTCACTCTTCCGAGGTCTCCCTGAAATGAATGTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR CCA 90 bp GCCATCTATCCTCAGGGATTTGGTGAGTCCAGATCTCACTCCTGTCTTTCCACAGCAGAGACAGGGCCTTaGAGGGATGAGCTGGAGCCT +
Preference number: 4 (lower is better)
Translates to: AIYPQGFGESRSHSCLSTAETGP*RDELEP
Trigger: AGGCTCCAGCTCATCCCTCCAAGGCCCTGTCTCTGC...TGTGGAAAGACAGGAGTGAGATCTGGACTCACCAAATCCCTGAGGATAGATGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR CCA 90 bp GCCATCTATCCTCAGGGATTTGGTGAGTCCAGATCTCACTCCTGTCTTTCCACACCAACCAAGGGGGTCTaGAAGGTGGGTGGGAGGGTA +
Preference number: 4 (lower is better)
Translates to: AIYPQGFGESRSHSCLSTPTKGV*KVGGRV
Trigger: TACCCTCCCACCCACCTTCCAGACCCCCTTGGTTGG...TGTGGAAAGACAGGAGTGAGATCTGGACTCACCAAATCCCTGAGGATAGATGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR CAA 72 bp TCAACCCAGAAGGGACTCCTCTTAACCTCCCACAGGTaGAGCCCACCAGCTTACAGTTGGTTTCCAGGAGAG +
Preference number: 4 (lower is better)
Translates to: STQKGLLLTSHR*SPPAYSWFPGE
Trigger: CTCTCCTGGAAACCAACTGTAAGCTGGTGGGCTCAACCTGTGGGAGGTTAAGAGGAGTCCCTTCTGGGTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR CAA 72 bp GGTTGGTATAAGGCTCCACCTGACACAACTTGTGAGTaGACGGTTGTCATGGCGATGTTGCCCTGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: GWYKAPPDTTCE*TVVMAMLPCWS
Trigger: GCTCCAGCAGGGCAACATCGCCATGACAACCGTCAACTCACAAGTTGTGTCAGGTGGAGCCTTATACCAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532623.5
CDS-3UTR TCA 90 bp ACTCCTCGTTTGTTCTTGGACTTCTTATCCTCATTGTCCAGGAGGGAGGTGAGGCATGGTGGCACTGTCTaGGGACAGGGACTGCAGGTT +
Preference number: 4 (lower is better)
Translates to: TPRLFLDFLSSLSRREVRHGGTV*GQGLQV
Trigger: AACCTGCAGTCCCTGTCCTCAGACAGTGCCACCATG...CCTCACCTCCCTCCTGGACAATGAGGATAAGAAGTCCAAGAACAAACGAGGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532623.5
CDS-3UTR TCA 90 bp TGGCCACTGGTTATGCTTTGGGGCTCCCTCCTGCCCTTGAATGTCTGTCAAAGGTTCTGTCCCATCCAATaGGTCATCGTGTGCAGCCAT +
Preference number: 4 (lower is better)
Translates to: WPLVMLWGSLLPLNVCQRFCPIQ*VIVCSH
Trigger: ATGGCTGCACACGATGACTCATTGGATGGGACAGAA...CCTTTGACAGACATTCAAGGGCAGGAGGGAGCCCCAAAGCATAACCAGTGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR GCA 90 bp ATACATTCATTTCAGGGAGACCTCGGAAGAGTGACCATCCTTTTGCTCTACCCCGGGGGCGGGACATTCTaGGTGGCCATCATCGTCAGA +
Preference number: 4 (lower is better)
Translates to: IHSFQGDLGRVTILLLYPGGGTF*VAIIVR
Trigger: TCTGACGATGATGGCCACGCAGAATGTCCCGCCCCC...GGGGTAGAGCAAAAGGATGGTCACTCTTCCGAGGTCTCCCTGAAATGAATGTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR GCA 90 bp AAGGTTAACCTGTGTGTTCTGGATCTGGATGGCTCCCTGGGGGATTGCTTGGGTCTGAAGAAGGGTTTGTaGTCCTGTTCCTGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: KVNLCVLDLDGSLGDCLGLKKGL*SCSCWW
Trigger: CCACCAGCAGGAACAGGAGCACAAACCCTTCTTCAG...ACCCAAGCAATCCCCCAGGGAGCCATCCAGATCCAGAACACACAGGTTAACCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532623.5
CDS-3UTR CCA 90 bp CTGTGTTCCAAGCCCAGGTCGCTGACATTTGTCGTCTGCAGCTCGTCGACCTCCCTTTCTACTTCCAGCTaGGCCAGAATTTCTTCCTGT +
Preference number: 4 (lower is better)
Translates to: LCSKPRSLTFVVCSSSTSLSTSS*ARISSC
Trigger: ACAGGAAGAAATTCTGGCCCAGCTGGAAGTAGAAAG...GGAGGTCGACGAGCTGCAGACGACAAATGTCAGCGACCTGGGCTTGGAACACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532623.5
CDS-3UTR CCA 90 bp GGGTCCCCTCCAGTTGAGCCAGGTAGCCACTCACATCCTGCCACTGAAGGAGGTAAGAACGCATTATATTaGTGGCATGCTTGGGCAAGA +
Preference number: 4 (lower is better)
Translates to: GSPPVEPGSHSHPATEGGKNALY*WHAWAR
Trigger: TCTTGCCCAAGCATGCCACCAATATAATGCGTTCTT...ACCTCCTTCAGTGGCAGGATGTGAGTGGCTACCTGGCTCAACTGGAGGGGACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR CCA 90 bp ACTCCTCGTTTGTTCTTGGACTTCTTATCCTCATTGTCCAGGAGGGAGGTGAGGGTGATCAGTGCCATCTaGGCTGCCCGACTACTCCAG +
Preference number: 4 (lower is better)
Translates to: TPRLFLDFLSSLSRREVRVISAI*AARLLQ
Trigger: CTGGAGTAGTCGGGCAGCCCAGATGGCACTGATCAC...CCTCACCTCCCTCCTGGACAATGAGGATAAGAAGTCCAAGAACAAACGAGGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532623.5
CDS-3UTR GCA 90 bp ATACATTCATTTCAGGGAGACCTCGGAAGAGTGACCATCCTTTTGCTCTACCCCTCCCATGTCCATGGTTaGTGTGCGCAGAGACAGGGC +
Preference number: 4 (lower is better)
Translates to: IHSFQGDLGRVTILLLYPSHVHG*CAQRQG
Trigger: GCCCTGTCTCTGCGCACAGCAACCATGGACATGGGA...GGGGTAGAGCAAAAGGATGGTCACTCTTCCGAGGTCTCCCTGAAATGAATGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR GCA 90 bp CTGGGGGACGCCTGTCCAGGTGGTGAGTGGAACGGTGTGTGTGTGTGTCTGTGTTGCATTTTATCCCACTaGACATTGCAAAAGTCTCAC +
Preference number: 4 (lower is better)
Translates to: LGDACPGGEWNGVCVCLCCILSH*TLQKSH
Trigger: GTGAGACTTTTGCAATGTGCAGTGGGATAAAATGCA...ACACAGACACACACACACACCGTTCCACTCACCACCTGGACAGGCGTCCCCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR CCA 90 bp AAGGTTAACCTGTGTGTTCTGGATCTGGATGGCTCCCTGGGGGATTGCTTGGGTTCCTGTTCCTGCTGGTaGACAAAGTTCTCGATGTCC +
Preference number: 4 (lower is better)
Translates to: KVNLCVLDLDGSLGDCLGSCSCW*TKFSMS
Trigger: GGACATCGAGAACTTTGTCCACCAGCAGGAACAGGA...ACCCAAGCAATCCCCCAGGGAGCCATCCAGATCCAGAACACACAGGTTAACCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532623.5
CDS-3UTR CCA 90 bp ACAAAGTTCTCGATGTCCACATCAAAGCTGGCGGAGGTGATGCACTCAGAGCCCCAGATTGTCCAGTTCTaGGTCATCGCTGAAGAAGGG +
Preference number: 4 (lower is better)
Translates to: TKFSMSTSKLAEVMHSEPQIVQF*VIAEEG
Trigger: CCCTTCTTCAGCGATGACCCAGAACTGGACAATCTG...GGGCTCTGAGTGCATCACCTCCGCCAGCTTTGATGTGGACATCGAGAACTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532623.5
CDS-3UTR CCA 90 bp ACAAAGTTCTCGATGTCCACATCAAAGCTGGCGGAGGTGATGCACTCAGAGCCCACCATGGTAACCGGTTaGTATAAGGCTCCACCTGAC +
Preference number: 4 (lower is better)
Translates to: TKFSMSTSKLAEVMHSEPTMVTG*YKAPPD
Trigger: GTCAGGTGGAGCCTTATACCAACCGGTTACCATGGT...GGGCTCTGAGTGCATCACCTCCGCCAGCTTTGATGTGGACATCGAGAACTTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532623.5
CDS-3UTR CCA 90 bp TCTTTGGGTGGGCCGGTGCTGAGACTTGATCTTCTTGGCTTTGGGGGCAGGATCAACGCATTATATTGGTaGCATGCTTGGGCAAGACTC +
Preference number: 4 (lower is better)
Translates to: SLGGPVLRLDLLGFGGRINALYW*HAWARL
Trigger: GAGTCTTGCCCAAGCATGCCACCAATATAATGCGTT...GATCCTGCCCCCAAAGCCAAGAAGATCAAGTCTCAGCACCGGCCCACCCAAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532623.5
CDS-3UTR CCA 90 bp CCATGGGGTGAGAGGGAACCGGAGGAGAGGGTGCCAACCAAGGGGGTCTGGAAGACTTTCCTCTATGTATaGCATCAAAAGGGAGTAAAA +
Preference number: 4 (lower is better)
Translates to: PWGEREPEERVPTKGVWKTFLYV*HQKGVK
Trigger: TTTTACTCCCTTTTGATGCCATACATAGAGGAAAGT...CTTCCAGACCCCCTTGGTTGGCACCCTCTCCTCCGGTTCCCTCTCACCCCATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR CCA 90 bp TTCTGTGATCACCTAGGGACAGCTGTGGCCTCAAAGTCACCTCCATATGGTTCCTGTCCAGGTGGTGAGTaGAACGGTGTGTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: FCDHLGTAVASKSPPYGSCPGGE*NGVCVC
Trigger: ACACACACACACACCGTTCCACTCACCACCTGGACA...GGAACCATATGGAGGTGACTTTGAGGCCACAGCTGTCCCTAGGTGATCACAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR GCA 90 bp CTCAAAGTCACCTCCATATGGTTCCTAGCCCAGGGTCTGCCATCTCCTTGGCTCATTATATTGGTGGCATaGTTGGGCAAGACTCCTCGT +
Preference number: 4 (lower is better)
Translates to: LKVTSIWFLAQGLPSPWLIILVA*LGKTPR
Trigger: ACGAGGAGTCTTGCCCAAGCATGCCACCAATATAAT...GAGCCAAGGAGATGGCAGACCCTGGGCTAGGAACCATATGGAGGTGACTTTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR GCA 90 bp CTCAAAGTCACCTCCATATGGTTCCTAGCCCAGGGTCTGCCATCTCCTTGGCTCACATCAGAAGGAGGTTaGATAACATTAGGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: LKVTSIWFLAQGLPSPWLTSEGG*ITLGRW
Trigger: CCACCTGCCTAATGTTATGCAACCTCCTTCTGATGT...GAGCCAAGGAGATGGCAGACCCTGGGCTAGGAACCATATGGAGGTGACTTTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR CCA 90 bp ACTCCTCGTTTGTTCTTGGACTTCTTATCCTCATTGTCCAGGAGGGAGGTGAGGATGCACTCAGAGCCCTaGGTGGCCTGTTCACATTTC +
Preference number: 4 (lower is better)
Translates to: TPRLFLDFLSSLSRREVRMHSEP*VACSHF
Trigger: GAAATGTGAACAGGCCACCCAGGGCTCTGAGTGCAT...CCTCACCTCCCTCCTGGACAATGAGGATAAGAAGTCCAAGAACAAACGAGGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532623.5
CDS-3UTR CCA 90 bp AAGGTTAACCTGTGTGTTCTGGATCTGGATGGCTCCCTGGGGGATTGCTTGGGTTGGATTCTCAGGACCTaGATTGCCTTCACCATCAGA +
Preference number: 4 (lower is better)
Translates to: KVNLCVLDLDGSLGDCLGWILRT*IAFTIR
Trigger: TCTGATGGTGAAGGCAATCCAGGTCCTGAGAATCCA...ACCCAAGCAATCCCCCAGGGAGCCATCCAGATCCAGAACACACAGGTTAACCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532623.5
CDS-3UTR CCA 90 bp TTCCTGCTGGTGGACAAAGTTCTCGATGTCCACATCAAAGCTGGCGGAGGTGATTGGAGACTCCGGACATaGAATTGGGGGAATTCTGCA +
Preference number: 4 (lower is better)
Translates to: FLLVDKVLDVHIKAGGGDWRLRT*NWGNSA
Trigger: TGCAGAATTCCCCCAATTCCATGTCCGGAGTCTCCA...ATCACCTCCGCCAGCTTTGATGTGGACATCGAGAACTTTGTCCACCAGCAGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532623.5
CDS-3UTR CCA 90 bp GCCATCTATCCTCAGGGATTTGGTGAGTCCAGATCTCACTCCTGTCTTTCCACATCCCCTGGGGGTTATTaGAGACTCCGGACATGGAAT +
Preference number: 4 (lower is better)
Translates to: AIYPQGFGESRSHSCLSTSPGGY*RLRTWN
Trigger: ATTCCATGTCCGGAGTCTCCAATAACCCCCAGGGGA...TGTGGAAAGACAGGAGTGAGATCTGGACTCACCAAATCCCTGAGGATAGATGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR CCA 90 bp ATACATTCATTTCAGGGAGACCTCGGAAGAGTGACCATCCTTTTGCTCTACCCCCTTGGAGGGATGAGCTaGAGCCTGGTGGATTCCATC +
Preference number: 4 (lower is better)
Translates to: IHSFQGDLGRVTILLLYPLGGMS*SLVDSI
Trigger: GATGGAATCCACCAGGCTCCAGCTCATCCCTCCAAG...GGGGTAGAGCAAAAGGATGGTCACTCTTCCGAGGTCTCCCTGAAATGAATGTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR TCA 90 bp TTCCTGCTGGTGGACAAAGTTCTCGATGTCCACATCAAAGCTGGCGGAGGTGATACACAACTTGTGAGTTaGCGGTTGTCATGGCGATGT +
Preference number: 4 (lower is better)
Translates to: FLLVDKVLDVHIKAGGGDTQLVS*RLSWRC
Trigger: ACATCGCCATGACAACCGTCAACTCACAAGTTGTGT...ATCACCTCCGCCAGCTTTGATGTGGACATCGAGAACTTTGTCCACCAGCAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532623.5
CDS-3UTR TCA 90 bp ATACATTCATTTCAGGGAGACCTCGGAAGAGTGACCATCCTTTTGCTCTACCCCGCAGGTTGTCCAAGTTaGTGGAACCATCGGGGTTTG +
Preference number: 4 (lower is better)
Translates to: IHSFQGDLGRVTILLLYPAGCPS*WNHRGL
Trigger: CAAACCCCGATGGTTCCATCAACTTGGACAACCTGC...GGGGTAGAGCAAAAGGATGGTCACTCTTCCGAGGTCTCCCTGAAATGAATGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR GCA 90 bp ACTCCTCGTTTGTTCTTGGACTTCTTATCCTCATTGTCCAGGAGGGAGGTGAGGAAGCCTCAGAAGTCCTaGTCCAGACTTCACCTGATG +
Preference number: 4 (lower is better)
Translates to: TPRLFLDFLSSLSRREVRKPQKS*SRLHLM
Trigger: CATCAGGTGAAGTCTGGAGCAGGACTTCTGAGGCTT...CCTCACCTCCCTCCTGGACAATGAGGATAAGAAGTCCAAGAACAAACGAGGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532623.5
CDS-3UTR GCA 90 bp TGGCCACTGGTTATGCTTTGGGGCTCCCTCCTGCCCTTGAATGTCTGTCAAAGGTCCCACTGGACTAGATaGTTTCCAATGTTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: WPLVMLWGSLLPLNVCQRSHWTR*FPMFLL
Trigger: CAGAAGAAACATTGGAAAGCATCTAGTCCAGTGGGA...CCTTTGACAGACATTCAAGGGCAGGAGGGAGCCCCAAAGCATAACCAGTGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR CCA 90 bp GCCATCTATCCTCAGGGATTTGGTGAGTCCAGATCTCACTCCTGTCTTTCCACATCCTGTTCCTGCTGGTaGACAAAGTTCTCGATGTCC +
Preference number: 4 (lower is better)
Translates to: AIYPQGFGESRSHSCLSTSCSCW*TKFSMS
Trigger: GGACATCGAGAACTTTGTCCACCAGCAGGAACAGGA...TGTGGAAAGACAGGAGTGAGATCTGGACTCACCAAATCCCTGAGGATAGATGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR CCA 90 bp GCCATCTATCCTCAGGGATTTGGTGAGTCCAGATCTCACTCCTGTCTTTCCACATTAACCTGTGTGTTCTaGATCTGGATGGCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: AIYPQGFGESRSHSCLSTLTCVF*IWMAPW
Trigger: CCAGGGAGCCATCCAGATCCAGAACACACAGGTTAA...TGTGGAAAGACAGGAGTGAGATCTGGACTCACCAAATCCCTGAGGATAGATGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR CCA 90 bp ACTCCTCGTTTGTTCTTGGACTTCTTATCCTCATTGTCCAGGAGGGAGGTGAGGTTAACCTGTGTGTTCTaGATCTGGATGGCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: TPRLFLDFLSSLSRREVRLTCVF*IWMAPW
Trigger: CCAGGGAGCCATCCAGATCCAGAACACACAGGTTAA...CCTCACCTCCCTCCTGGACAATGAGGATAAGAAGTCCAAGAACAAACGAGGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532623.5
CDS-3UTR CCA 90 bp ATACATTCATTTCAGGGAGACCTCGGAAGAGTGACCATCCTTTTGCTCTACCCCTTTGGGGGCAGGATCTaGGTTGCTGGCATCAAGCAT +
Preference number: 4 (lower is better)
Translates to: IHSFQGDLGRVTILLLYPFGGRI*VAGIKH
Trigger: ATGCTTGATGCCAGCAACCCAGATCCTGCCCCCAAA...GGGGTAGAGCAAAAGGATGGTCACTCTTCCGAGGTCTCCCTGAAATGAATGTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR CCA 90 bp GCCATCTATCCTCAGGGATTTGGTGAGTCCAGATCTCACTCCTGTCTTTCCACATTCTCTGAAGGTCTATaGAGGGCGTGGAGCACTGAA +
Preference number: 4 (lower is better)
Translates to: AIYPQGFGESRSHSCLSTFSEGL*RAWSTE
Trigger: TTCAGTGCTCCACGCCCTCCATAGACCTTCAGAGAA...TGTGGAAAGACAGGAGTGAGATCTGGACTCACCAAATCCCTGAGGATAGATGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR CCA 90 bp CTCAAAGTCACCTCCATATGGTTCCTAGCCCAGGGTCTGCCATCTCCTTGGCTCCATTCAGTACTGGTTTaGTGGATACATCAGAAGGAG +
Preference number: 4 (lower is better)
Translates to: LKVTSIWFLAQGLPSPWLHSVLV*WIHQKE
Trigger: CTCCTTCTGATGTATCCACCAAACCAGTACTGAATG...GAGCCAAGGAGATGGCAGACCCTGGGCTAGGAACCATATGGAGGTGACTTTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR TCA 90 bp GTCATCGCTGAAGAAGGGTTTGTGCTCCTGTTCCTGCTGGTGGACAAAGTTCTCGTTGCATCATGGGATTaGTTCACATGGAGGACTGTT +
Preference number: 4 (lower is better)
Translates to: VIAEEGFVLLFLLVDKVLVASWD*FTWRTV
Trigger: AACAGTCCTCCATGTGAATCAATCCCATGATGCAAC...GAGAACTTTGTCCACCAGCAGGAACAGGAGCACAAACCCTTCTTCAGCGATGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532623.5
CDS-3UTR CCA 90 bp GACTCCTCGTTTGTTCTTGGACTTCTTATCCTCATTGTCCAGGAGGGAGGTGAGTATTGGTGGCATGCTTaGGCAAGACTCCTCGTTTGT +
Preference number: 4 (lower is better)
Translates to: DSSFVLGLLILIVQEGGEYWWHA*ARLLVC
Trigger: ACAAACGAGGAGTCTTGCCCAAGCATGCCACCAATA...CTCACCTCCCTCCTGGACAATGAGGATAAGAAGTCCAAGAACAAACGAGGAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532623.5
CDS-3UTR CCA 90 bp CTGAAGGTCTATGGAGGGCGTGGAGCACTGAAGGTGGGAACATCTAGGGTAAAAAACGCATTATATTGGTaGCATGCTTGGGCAAGACTC +
Preference number: 4 (lower is better)
Translates to: LKVYGGRGALKVGTSRVKNALYW*HAWARL
Trigger: GAGTCTTGCCCAAGCATGCCACCAATATAATGCGTT...TTTTACCCTAGATGTTCCCACCTTCAGTGCTCCACGCCCTCCATAGACCTTCAG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR CAA 72 bp ATTCAGTACTGGTTTGGTGGATACATCAGAAGGAGGTaGCATAACATTAGGCAGGTGGAGGGGCTGAGAGGA +
Preference number: 4 (lower is better)
Translates to: IQYWFGGYIRRR*HNIRQVEGLRG
Trigger: TCCTCTCAGCCCCTCCACCTGCCTAATGTTATGCAACCTCCTTCTGATGTATCCACCAAACCAGTACTGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR GCA 90 bp ACTCCTCGTTTGTTCTTGGACTTCTTATCCTCATTGTCCAGGAGGGAGGTGAGGATTATATTGGTGGCATaGTTGGGCAAGACTCCTCGT +
Preference number: 4 (lower is better)
Translates to: TPRLFLDFLSSLSRREVRIILVA*LGKTPR
Trigger: ACGAGGAGTCTTGCCCAAGCATGCCACCAATATAAT...CCTCACCTCCCTCCTGGACAATGAGGATAAGAAGTCCAAGAACAAACGAGGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532623.5
CDS-3UTR CCA 90 bp ACAAAGTTCTCGATGTCCACATCAAAGCTGGCGGAGGTGATGCACTCAGAGCCCCTCCTCGTTTGTTCTTaGACTTCTTATCCTCATTGT +
Preference number: 4 (lower is better)
Translates to: TKFSMSTSKLAEVMHSEPLLVCS*TSYPHC
Trigger: ACAATGAGGATAAGAAGTCCAAGAACAAACGAGGAG...GGGCTCTGAGTGCATCACCTCCGCCAGCTTTGATGTGGACATCGAGAACTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532623.5
CDS-3UTR CCA 90 bp GCCATCTATCCTCAGGGATTTGGTGAGTCCAGATCTCACTCCTGTCTTTCCACAGGCCACATTCAGTACTaGTTTGGTGGATACATCAGA +
Preference number: 4 (lower is better)
Translates to: AIYPQGFGESRSHSCLSTGHIQY*FGGYIR
Trigger: TCTGATGTATCCACCAAACCAGTACTGAATGTGGCC...TGTGGAAAGACAGGAGTGAGATCTGGACTCACCAAATCCCTGAGGATAGATGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298282.14
3UTR CAA 72 bp ATTATATTGGTGGCATGCTTGGGCAAGACTCCTCGTTaGTTCTTGGACTTCTTATCCTCATTGTCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: IILVACLGKTPR*FLDFLSSLSRR
Trigger: CCTCCTGGACAATGAGGATAAGAAGTCCAAGAACAAACGAGGAGTCTTGCCCAAGCATGCCACCAATATAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532623.5
3UTR CAA 72 bp TTTACTGAAAACGTCTCGGCCACATTCAGTACTGGTTaGGTGGATACATCAGAAGGAGGTTGCATAACATTA +
Preference number: 4 (lower is better)
Translates to: FTENVSATFSTG*VDTSEGGCITL
Trigger: TAATGTTATGCAACCTCCTTCTGATGTATCCACCAAACCAGTACTGAATGTGGCCGAGACGTTTTCAGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR CAA 90 bp CAGCCATGGGGTGAGAGGGAACCGGAGGAGAGGGTGCCAACCAAGGGGGTCTGGCATCCCCGCAGGCTCTaGGGTGCCATTCTCTGGGCC +
Preference number: 5 (lower is better)
Translates to: QPWGEREPEERVPTKGVWHPRRL*GAILWA
Trigger: GGCCCAGAGAATGGCACCCAAGAGCCTGCGGGGATG...CCAGACCCCCTTGGTTGGCACCCTCTCCTCCGGTTCCCTCTCACCCCATGGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS CCA 90 bp GCTCCCAGATGCGTTCATCTCTGGGCCGGCTCCACTCGGCCTCCTTaGGCCAGGGAAACAGACTCTTTGCCTCCTCCCCTGCCCGGTCCA +
Preference number: 5 (lower is better)
Translates to: APRCVHLWAGSTRPP*ARETDSLPPPLPGP
Trigger: TGGACCGGGCAGGGGAGGAGGCAAAGAGTCTGTTTCCCTGGCCCAAGGAGGCCGAGTGGAGCCGGCCCAGAGATGAACGCATCTGGGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558729.5
ENST00000561115.5
CDS CCA 90 bp ACATCCCTGGCAGGTACTTGGAGCTGGGAGCAACCCTCTGCCCCCTaGGTGGCCCTCAGCAGGGGCCTTTCAAGCCAAGCCCTGCTGACA +
Preference number: 5 (lower is better)
Translates to: TSLAGTWSWEQPSAP*VALSRGLSSQALLT
Trigger: TGTCAGCAGGGCTTGGCTTGAAAGGCCCCTGCTGAGGGCCACCCAGGGGGCAGAGGGTTGCTCCCAGCTCCAAGTACCTGCCAGGGATGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561399.5
CDS-3UTR CAA 90 bp GATGGGCATCCCCGCAGGCTCTTGGGTGCCATTCTCTGGGCCCTCCCCCACATTTCCCTGGGGGATTGCTaGGGTGACCACCTGACCCTG +
Preference number: 5 (lower is better)
Translates to: DGHPRRLLGAILWALPHISLGDC*GDHLTL
Trigger: CAGGGTCAGGTGGTCACCCAAGCAATCCCCCAGGGA...AATGTGGGGGAGGGCCCAGAGAATGGCACCCAAGAGCCTGCGGGGATGCCCATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR CAA 90 bp TTCCACACAGGCTGCTCGACTGGCCCCGCCAAACAGAGTCCTCGGCAGTTCCAGTGGAACCATCGGGGTTaGTCCCTGGGGCACCGCCCT +
Preference number: 5 (lower is better)
Translates to: FHTGCSTGPAKQSPRQFQWNHRG*SLGHRP
Trigger: AGGGCGGTGCCCCAGGGACAAACCCCGATGGTTCCA...CTGGAACTGCCGAGGACTCTGTTTGGCGGGGCCAGTCGAGCAGCCTGTGTGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR CAA 90 bp GTGTGTCCGTGCTGGGGGACGCCTGTCCAGGTGGTGAGTGGAACGGTGTGTGTGGTTGTCATGGCGATGTaGCCCTGCTGGAGCGCTGAG +
Preference number: 5 (lower is better)
Translates to: VCPCWGTPVQVVSGTVCVVVMAM*PCWSAE
Trigger: CTCAGCGCTCCAGCAGGGCAACATCGCCATGACAAC...CACACACACCGTTCCACTCACCACCTGGACAGGCGTCCCCCAGCACGGACACAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR CAA 90 bp GATGGGCATCCCCGCAGGCTCTTGGGTGCCATTCTCTGGGCCCTCCCCCACATTGGGCTGGGGTCCTCATaGAAGCTCGGTGGTTGGGAA +
Preference number: 5 (lower is better)
Translates to: DGHPRRLLGAILWALPHIGLGSS*KLGGWE
Trigger: TTCCCAACCACCGAGCTTCAATGAGGACCCCAGCCC...AATGTGGGGGAGGGCCCAGAGAATGGCACCCAAGAGCCTGCGGGGATGCCCATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR CAA 90 bp CCATGGGGTGAGAGGGAACCGGAGGAGAGGGTGCCAACCAAGGGGGTCTGGAAGCTCCCATGTCCATGGTaGCTGTGCGCAGAGACAGGG +
Preference number: 5 (lower is better)
Translates to: PWGEREPEERVPTKGVWKLPCPW*LCAETG
Trigger: CCCTGTCTCTGCGCACAGCAACCATGGACATGGGAG...CTTCCAGACCCCCTTGGTTGGCACCCTCTCCTCCGGTTCCCTCTCACCCCATGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR CAA 90 bp CAGCCATGGGGTGAGAGGGAACCGGAGGAGAGGGTGCCAACCAAGGGGGTCTGGATCCCCTGGGGGTTATaGGAGACTCCGGACATGGAA +
Preference number: 5 (lower is better)
Translates to: QPWGEREPEERVPTKGVWIPWGL*ETPDME
Trigger: TTCCATGTCCGGAGTCTCCAATAACCCCCAGGGGAT...CCAGACCCCCTTGGTTGGCACCCTCTCCTCCGGTTCCCTCTCACCCCATGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR CAA 90 bp TGGCCACTGGTTATGCTTTGGGGCTCCCTCCTGCCCTTGAATGTCTGTCAAAGGTGGACAGCCTGGGCCTaGGAGGGTGGCTGGGCGGTT +
Preference number: 5 (lower is better)
Translates to: WPLVMLWGSLLPLNVCQRWTAWA*EGGWAV
Trigger: AACCGCCCAGCCACCCTCCAAGGCCCAGGCTGTCCA...CCTTTGACAGACATTCAAGGGCAGGAGGGAGCCCCAAAGCATAACCAGTGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR CAA 90 bp GTGTGTCCGTGCTGGGGGACGCCTGTCCAGGTGGTGAGTGGAACGGTGTGTGTGTCGCTGAAGAAGGGTTaGTGCTCCTGTTCCTGCTGG +
Preference number: 5 (lower is better)
Translates to: VCPCWGTPVQVVSGTVCVSLKKG*CSCSCW
Trigger: CCAGCAGGAACAGGAGCACAAACCCTTCTTCAGCGA...CACACACACCGTTCCACTCACCACCTGGACAGGCGTCCCCCAGCACGGACACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR CAA 90 bp TGGGATGGGCATCCCCGCAGGCTCTTGGGTGCCATTCTCTGGGCCCTCCCCCACTCCTTGCAGAGTTCATaGACTTTCTCCAGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: WDGHPRRLLGAILWALPHSLQSS*TFSSSS
Trigger: GCTGGAGCTGGAGAAAGTCAATGAACTCTGCAAGGA...GTGGGGGAGGGCCCAGAGAATGGCACCCAAGAGCCTGCGGGGATGCCCATCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR CAA 90 bp CTGTGTTCCAAGCCCAGGTCGCTGACATTTGTCGTCTGCAGCTCGTCGACCTCCTCCCTGGGGGATTGCTaGGGTGACCACCTGACCCTG +
Preference number: 5 (lower is better)
Translates to: LCSKPRSLTFVVCSSSTSSLGDC*GDHLTL
Trigger: CAGGGTCAGGTGGTCACCCAAGCAATCCCCCAGGGA...GGAGGTCGACGAGCTGCAGACGACAAATGTCAGCGACCTGGGCTTGGAACACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532623.5
CDS-3UTR CAA 90 bp GGAGGTGAGGTCAAGGTTAACCTGTGTGTTCTGGATCTGGATGGCTCCCTGGGGTGGAACCATCGGGGTTaGTCCCTGGGGCACCGCCCT +
Preference number: 5 (lower is better)
Translates to: GGEVKVNLCVLDLDGSLGWNHRG*SLGHRP
Trigger: AGGGCGGTGCCCCAGGGACAAACCCCGATGGTTCCA...CCCCAGGGAGCCATCCAGATCCAGAACACACAGGTTAACCTTGACCTCACCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532623.5
CDS-3UTR CAA 90 bp GTGTGGGATGGGCATCCCCGCAGGCTCTTGGGTGCCATTCTCTGGGCCCTCCCCTGCAGGTTGTCCAAGTaGATGGAACCATCGGGGTTT +
Preference number: 5 (lower is better)
Translates to: VWDGHPRRLLGAILWALPCRLSK*MEPSGF
Trigger: AAACCCCGATGGTTCCATCAACTTGGACAACCTGCA...GGGGAGGGCCCAGAGAATGGCACCCAAGAGCCTGCGGGGATGCCCATCCCACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS CCA 90 bp TGGGGGCGGGACATTCTGCGTGGCCATCATCGTCAGAGCGGGGGCTaGGGAGGCATGTTGCATCATGGGATTGATTCACATGGAGGACTG +
Preference number: 5 (lower is better)
Translates to: WGRDILRGHHRQSGG*GGMLHHGIDSHGGL
Trigger: CAGTCCTCCATGTGAATCAATCCCATGATGCAACATGCCTCCCCAGCCCCCGCTCTGACGATGATGGCCACGCAGAATGTCCCGCCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000298282.14
ENST00000531212.5
ENST00000532623.5
ENST00000558705.1
ENST00000558729.5
ENST00000559662.5
CDS CCA 90 bp TGGGGGCGGGACATTCTGCGTGGCCATCATCGTCAGAGCGGGGGCTaGGGAGGCATGTTGCATCATGGGATTGATTCACATGGAGGACAG +
Preference number: 5 (lower is better)
Translates to: WGRDILRGHHRQSGG*GGMLHHGIDSHGGQ
Trigger: CTGTCCTCCATGTGAATCAATCCCATGATGCAACATGCCTCCCCAGCCCCCGCTCTGACGATGATGGCCACGCAGAATGTCCCGCCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000557814.5
CDS-3UTR CAA 90 bp TGCAGCACCCCCGCAGCGATGGAGTTGGGCCAGAATCTTTGGGTGGGCCGGTGCATATTGGTGGCATGCTaGGGCAAGACTCCTCGTTTG +
Preference number: 5 (lower is better)
Translates to: CSTPAAMELGQNLWVGRCILVAC*GKTPRL
Trigger: CAAACGAGGAGTCTTGCCCAAGCATGCCACCAATAT...GCACCGGCCCACCCAAAGATTCTGGCCCAACTCCATCGCTGCGGGGGTGCTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532623.5
CDS-3UTR CAA 90 bp CGACTGGCCCCGCCAAACAGAGTCCTCGGCAGTTCCAGGGAAGTGGGGCTGGGGGCATTGATGAACCAGTaGTTTACTTGCAGGAGGGTG +
Preference number: 5 (lower is better)
Translates to: RLAPPNRVLGSSREVGLGALMNQ*FTCRRV
Trigger: CACCCTCCTGCAAGTAAACAACTGGTTCATCAATGC...CCCCAGCCCCACTTCCCTGGAACTGCCGAGGACTCTGTTTGGCGGGGCCAGTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR CAA 90 bp GGGTCCCCTCCAGTTGAGCCAGGTAGCCACTCACATCCTGCCACTGAAGGAGGTGGGTCTGCCATCTCCTaGGCTCTTGGAGTCAACCCA +
Preference number: 5 (lower is better)
Translates to: GSPPVEPGSHSHPATEGGGSAIS*ALGVNP
Trigger: TGGGTTGACTCCAAGAGCCAAGGAGATGGCAGACCC...ACCTCCTTCAGTGGCAGGATGTGAGTGGCTACCTGGCTCAACTGGAGGGGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR CAA 90 bp GATGGGCATCCCCGCAGGCTCTTGGGTGCCATTCTCTGGGCCCTCCCCCACATTAGAGTGACCATCCTTTaGCTCTACCCCAACCAGGTG +
Preference number: 5 (lower is better)
Translates to: DGHPRRLLGAILWALPHIRVTIL*LYPNQV
Trigger: CACCTGGTTGGGGTAGAGCAAAAGGATGGTCACTCT...AATGTGGGGGAGGGCCCAGAGAATGGCACCCAAGAGCCTGCGGGGATGCCCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS GCA 90 bp CACACTCACCTGTGTGTTCTGGATCTGGATGGCTCCCTGGGGGATTaGTTGGGTGACCACCTGACCCTGGGAGGTTACCATGGTAACCGG +
Preference number: 5 (lower is better)
Translates to: HTHLCVLDLDGSLGD*LGDHLTLGGYHGNR
Trigger: CCGGTTACCATGGTAACCTCCCAGGGTCAGGTGGTCACCCAAGCAATCCCCCAGGGAGCCATCCAGATCCAGAACACACAGGTGAGTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526955.1
CDS CCA 90 bp TGGGGGCGGGACATTCTGCGTGGCCATCATCGTCAGAGCGGGGGCTaGGGAGGCATGTTGCATCATGGGATTGATTCACATGGAGGACAA +
Preference number: 5 (lower is better)
Translates to: WGRDILRGHHRQSGG*GGMLHHGIDSHGGQ
Trigger: TTGTCCTCCATGTGAATCAATCCCATGATGCAACATGCCTCCCCAGCCCCCGCTCTGACGATGATGGCCACGCAGAATGTCCCGCCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000527238.5
CDS-3UTR CAA 90 bp CGACTGGCCCCGCCAAACAGAGTCCTCGGCAGTTCCAGGGAAGTGGGGCTGGGGTGTTGCATCATGGGATaGATTCACATGGAGGACTGT +
Preference number: 5 (lower is better)
Translates to: RLAPPNRVLGSSREVGLGCCIMG*IHMEDC
Trigger: ACAGTCCTCCATGTGAATCAATCCCATGATGCAACA...CCCCAGCCCCACTTCCCTGGAACTGCCGAGGACTCTGTTTGGCGGGGCCAGTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR CAA 90 bp GGGGGCAGGATCTGGGTTGCTGGCATCAAGCATGGGCTGCAGGATGCGCCTCCGGGCAAGACTCCTCGTTaGTTCTTGGACTTCTTATCC +
Preference number: 5 (lower is better)
Translates to: GGRIWVAGIKHGLQDAPPGKTPR*FLDFLS
Trigger: GGATAAGAAGTCCAAGAACAAACGAGGAGTCTTGCC...CGGAGGCGCATCCTGCAGCCCATGCTTGATGCCAGCAACCCAGATCCTGCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532623.5
CDS-3UTR CAA 90 bp GATGGGCATCCCCGCAGGCTCTTGGGTGCCATTCTCTGGGCCCTCCCCCACATTATATTGGTGGCATGCTaGGGCAAGACTCCTCGTTTG +
Preference number: 5 (lower is better)
Translates to: DGHPRRLLGAILWALPHIILVAC*GKTPRL
Trigger: CAAACGAGGAGTCTTGCCCAAGCATGCCACCAATAT...AATGTGGGGGAGGGCCCAGAGAATGGCACCCAAGAGCCTGCGGGGATGCCCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR CAA 90 bp CAGCCATGGGGTGAGAGGGAACCGGAGGAGAGGGTGCCAACCAAGGGGGTCTGGTCTATCCTCAGGGATTaGGTGAGTCCAGATCTCACT +
Preference number: 5 (lower is better)
Translates to: QPWGEREPEERVPTKGVWSILRD*VSPDLT
Trigger: AGTGAGATCTGGACTCACCAAATCCCTGAGGATAGA...CCAGACCCCCTTGGTTGGCACCCTCTCCTCCGGTTCCCTCTCACCCCATGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR CAA 90 bp TGGGATGGGCATCCCCGCAGGCTCTTGGGTGCCATTCTCTGGGCCCTCCCCCACTTATCCCACTGCACATaGCAAAAGTCTCACGCCAAA +
Preference number: 5 (lower is better)
Translates to: WDGHPRRLLGAILWALPHLSHCT*QKSHAK
Trigger: TTTGGCGTGAGACTTTTGCAATGTGCAGTGGGATAA...GTGGGGGAGGGCCCAGAGAATGGCACCCAAGAGCCTGCGGGGATGCCCATCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR CAA 90 bp CGACTGGCCCCGCCAAACAGAGTCCTCGGCAGTTCCAGGGAAGTGGGGCTGGGGTACATCAGAAGGAGGTaGCATAACATTAGGCAGGTG +
Preference number: 5 (lower is better)
Translates to: RLAPPNRVLGSSREVGLGYIRRR*HNIRQV
Trigger: CACCTGCCTAATGTTATGCAACCTCCTTCTGATGTA...CCCCAGCCCCACTTCCCTGGAACTGCCGAGGACTCTGTTTGGCGGGGCCAGTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS CCA 90 bp TTGGGTAGCGAGCTATGGCTTTCTGCTTTATGGGTGGGTGGGGGATaGTGTCTAGAGCCTAGGACAGAGCCTCTGGTGGGAGGTGCTTCG +
Preference number: 5 (lower is better)
Translates to: LGSELWLSALWVGGG*CLEPRTEPLVGGAS
Trigger: CGAAGCACCTCCCACCAGAGGCTCTGTCCTAGGCTCTAGACACCATCCCCCACCCACCCATAAAGCAGAAAGCCATAGCTCGCTACCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526955.1
CDS-3UTR CAA 90 bp GATGGGCATCCCCGCAGGCTCTTGGGTGCCATTCTCTGGGCCCTCCCCCACATTGGCAAGACTCCTCGTTaGTTCTTGGACTTCTTATCC +
Preference number: 5 (lower is better)
Translates to: DGHPRRLLGAILWALPHIGKTPR*FLDFLS
Trigger: GGATAAGAAGTCCAAGAACAAACGAGGAGTCTTGCC...AATGTGGGGGAGGGCCCAGAGAATGGCACCCAAGAGCCTGCGGGGATGCCCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR CAA 90 bp CCATCCAATGAGTCATCGTGTGCAGCCATCATAGCCTGCTGCATGGCCATGGTGCCCGCAGCGATGGAGTaGGGCCAGAATCTTTGGGTG +
Preference number: 5 (lower is better)
Translates to: PSNESSCAAIIACCMAMVPAAME*GQNLWV
Trigger: CACCCAAAGATTCTGGCCCAACTCCATCGCTGCGGG...CACCATGGCCATGCAGCAGGCTATGATGGCTGCACACGATGACTCATTGGATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532623.5
CDS-3UTR CAA 90 bp CTGGGGGACGCCTGTCCAGGTGGTGAGTGGAACGGTGTGTGTGTGTGTCTGTGTTTAACCTCCCACAGGTaGAGCCCACCAGCTTACAGT +
Preference number: 5 (lower is better)
Translates to: LGDACPGGEWNGVCVCLCLTSHR*SPPAYS
Trigger: ACTGTAAGCTGGTGGGCTCAACCTGTGGGAGGTTAA...ACACAGACACACACACACACCGTTCCACTCACCACCTGGACAGGCGTCCCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR CAA 90 bp TGGGATGGGCATCCCCGCAGGCTCTTGGGTGCCATTCTCTGGGCCCTCCCCCACACATTCAGTACTGGTTaGGTGGATACATCAGAAGGA +
Preference number: 5 (lower is better)
Translates to: WDGHPRRLLGAILWALPHTFSTG*VDTSEG
Trigger: TCCTTCTGATGTATCCACCAAACCAGTACTGAATGT...GTGGGGGAGGGCCCAGAGAATGGCACCCAAGAGCCTGCGGGGATGCCCATCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS TCA 90 bp ATCACCCTTCCCAGTCTTTGCACCGACCTGACACAACTTGTGAGTTaGCGGTTGTCATGGCGATGTTGCCCTGCTGGAGCGCTGAGGCTG +
Preference number: 5 (lower is better)
Translates to: ITLPSLCTDLTQLVS*RLSWRCCPAGALRL
Trigger: CAGCCTCAGCGCTCCAGCAGGGCAACATCGCCATGACAACCGTCAACTCACAAGTTGTGTCAGGTCGGTGCAAAGACTGGGAAGGGTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526955.1
CDS TCA 90 bp GAGCCAAAGCACCTGATGCCAATCTTCATCAGACTGACACCGGCGTaGCAACACAGCCTATACTTCCCAGCACTGCTCGGGACGTCAGCG +
Preference number: 5 (lower is better)
Translates to: EPKHLMPIFIRLTPA*QHSLYFPALLGTSA
Trigger: CGCTGACGTCCCGAGCAGTGCTGGGAAGTATAGGCTGTGTTGTCACGCCGGTGTCAGTCTGATGAAGATTGGCATCAGGTGCTTTGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531116.5
CDS CCA 90 bp CTCTACTTGGAGCCCTTGGGTAGCGAGCTATGGCTTTCTGCTTTATaGGTGGGTGGGGGATGGTGTCTAGAGCCTAGGACAGAGCCTCTG +
Preference number: 5 (lower is better)
Translates to: LYLEPLGSELWLSAL*VGGGWCLEPRTEPL
Trigger: CAGAGGCTCTGTCCTAGGCTCTAGACACCATCCCCCACCCACCCATAAAGCAGAAAGCCATAGCTCGCTACCCAAGGGCTCCAAGTAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526955.1
CDS-3UTR CAA 90 bp AGGTTGTCCAAGTTGATGGAACCATCGGGGTTTGTCCCTGGGGCACCGCCCTGCTCCTTGCAGAGTTCATaGACTTTCTCCAGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: RLSKLMEPSGFVPGAPPCSLQSS*TFSSSS
Trigger: GCTGGAGCTGGAGAAAGTCAATGAACTCTGCAAGGA...GCAGGGCGGTGCCCCAGGGACAAACCCCGATGGTTCCATCAACTTGGACAACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532623.5
CDS-3UTR CAA 90 bp CTGGGGGACGCCTGTCCAGGTGGTGAGTGGAACGGTGTGTGTGTGTGTCTGTGTTTGTCGCTGTGCATCTaGGTTTTGAGGCAGGTGATG +
Preference number: 5 (lower is better)
Translates to: LGDACPGGEWNGVCVCLCLSLCI*VLRQVM
Trigger: CATCACCTGCCTCAAAACCAAGATGCACAGCGACAA...ACACAGACACACACACACACCGTTCCACTCACCACCTGGACAGGCGTCCCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR CAA 90 bp AAGGTTAACCTGTGTGTTCTGGATCTGGATGGCTCCCTGGGGGATTGCTTGGGTGTTGGGCCAGAATCTTaGGGTGGGCCGGTGCTGAGA +
Preference number: 5 (lower is better)
Translates to: KVNLCVLDLDGSLGDCLGVGPES*GGPVLR
Trigger: TCTCAGCACCGGCCCACCCAAAGATTCTGGCCCAAC...ACCCAAGCAATCCCCCAGGGAGCCATCCAGATCCAGAACACACAGGTTAACCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532623.5
CDS-3UTR CAA 90 bp TTCTGTGATCACCTAGGGACAGCTGTGGCCTCAAAGTCACCTCCATATGGTTCCAGGGGTCCCCTCCAGTaGAGCCAGGTAGCCACTCAC +
Preference number: 5 (lower is better)
Translates to: FCDHLGTAVASKSPPYGSRGPLQ*SQVATH
Trigger: GTGAGTGGCTACCTGGCTCAACTGGAGGGGACCCCT...GGAACCATATGGAGGTGACTTTGAGGCCACAGCTGTCCCTAGGTGATCACAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS TCA 90 bp TCCAGACTTCACCTGATGCCAATCTTCATCAGACTGACACCGGCGTaGCAACACAGCCTATACTTCCCAGCACTGCTCGGGACGTCAGCG +
Preference number: 5 (lower is better)
Translates to: SRLHLMPIFIRLTPA*QHSLYFPALLGTSA
Trigger: CGCTGACGTCCCGAGCAGTGCTGGGAAGTATAGGCTGTGTTGTCACGCCGGTGTCAGTCTGATGAAGATTGGCATCAGGTGAAGTCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530517.5
CDS CCA 90 bp ATGGGAGTGGGTAGGAGCGAGGGCAAGCAGGGTTCCCAGTTCATTTaGCACTCATGTGTAAAGACCCTCTACTTGGAGCCCTTGGGTAGC +
Preference number: 5 (lower is better)
Translates to: MGVGRSEGKQGSQFI*HSCVKTLYLEPLGS
Trigger: GCTACCCAAGGGCTCCAAGTAGAGGGTCTTTACACATGAGTGCCAAATGAACTGGGAACCCTGCTTGCCCTCGCTCCTACCCACTCCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526955.1
CDS-3UTR CAA 90 bp TTCTGTGATCACCTAGGGACAGCTGTGGCCTCAAAGTCACCTCCATATGGTTCCCTGTATACAGCTCGCTaGTCAGCCTCCAGCTGGGCC +
Preference number: 5 (lower is better)
Translates to: FCDHLGTAVASKSPPYGSLYTAR*SASSWA
Trigger: GGCCCAGCTGGAGGCTGACAAGCGAGCTGTATACAG...GGAACCATATGGAGGTGACTTTGAGGCCACAGCTGTCCCTAGGTGATCACAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR CAA 90 bp CCATCCAATGAGTCATCGTGTGCAGCCATCATAGCCTGCTGCATGGCCATGGTGTCGCTGAAGAAGGGTTaGTGCTCCTGTTCCTGCTGG +
Preference number: 5 (lower is better)
Translates to: PSNESSCAAIIACCMAMVSLKKG*CSCSCW
Trigger: CCAGCAGGAACAGGAGCACAAACCCTTCTTCAGCGA...CACCATGGCCATGCAGCAGGCTATGATGGCTGCACACGATGACTCATTGGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532623.5
CDS-3UTR CAA 90 bp GGCTGGGACCACAATCCCCTGGGGGTTATTGGAGACTCCGGACATGGAATTGGGGACACAACTTGTGAGTaGACGGTTGTCATGGCGATG +
Preference number: 5 (lower is better)
Translates to: GWDHNPLGVIGDSGHGIGDTTCE*TVVMAM
Trigger: CATCGCCATGACAACCGTCAACTCACAAGTTGTGTC...CCCAATTCCATGTCCGGAGTCTCCAATAACCCCCAGGGGATTGTGGTCCCAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000532623.5
CDS-3UTR CAA 90 bp TTCTGTGATCACCTAGGGACAGCTGTGGCCTCAAAGTCACCTCCATATGGTTCCGTTGGGCCAGAATCTTaGGGTGGGCCGGTGCTGAGA +
Preference number: 5 (lower is better)
Translates to: FCDHLGTAVASKSPPYGSVGPES*GGPVLR
Trigger: TCTCAGCACCGGCCCACCCAAAGATTCTGGCCCAAC...GGAACCATATGGAGGTGACTTTGAGGCCACAGCTGTCCCTAGGTGATCACAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR CAA 90 bp CTGAAGGTCTATGGAGGGCGTGGAGCACTGAAGGTGGGAACATCTAGGGTAAAACCCGCAGCGATGGAGTaGGGCCAGAATCTTTGGGTG +
Preference number: 5 (lower is better)
Translates to: LKVYGGRGALKVGTSRVKPAAME*GQNLWV
Trigger: CACCCAAAGATTCTGGCCCAACTCCATCGCTGCGGG...TTTTACCCTAGATGTTCCCACCTTCAGTGCTCCACGCCCTCCATAGACCTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR CAA 90 bp CTGTGTTCCAAGCCCAGGTCGCTGACATTTGTCGTCTGCAGCTCGTCGACCTCCTTCTCAGGACCTGGATaGCCTTCACCATCAGATTGT +
Preference number: 5 (lower is better)
Translates to: LCSKPRSLTFVVCSSSTSFSGPG*PSPSDC
Trigger: ACAATCTGATGGTGAAGGCAATCCAGGTCCTGAGAA...GGAGGTCGACGAGCTGCAGACGACAAATGTCAGCGACCTGGGCTTGGAACACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532623.5
CDS-3UTR CAA 90 bp TCCTCGTTTGTTCTTGGACTTCTTATCCTCATTGTCCAGGAGGGAGGTGAGGTCGTTGTCATGGCGATGTaGCCCTGCTGGAGCGCTGAG +
Preference number: 5 (lower is better)
Translates to: SSFVLGLLILIVQEGGEVVVMAM*PCWSAE
Trigger: CTCAGCGCTCCAGCAGGGCAACATCGCCATGACAAC...GACCTCACCTCCCTCCTGGACAATGAGGATAAGAAGTCCAAGAACAAACGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532623.5
CDS TCA 90 bp CGCAGAAGCCTGGCCTCTCTTTCATTAGCAGTCTGTCACAAAGCGTaGAGGGCTTCCATAAATTCTGCAGCTCAGCAGCTGCCGAGGAGA +
Preference number: 5 (lower is better)
Translates to: RRSLASLSLAVCHKA*RASINSAAQQLPRR
Trigger: TCTCCTCGGCAGCTGCTGAGCTGCAGAATTTATGGAAGCCCTTCACGCTTTGTGACAGACTGCTAATGAAAGAGAGGCCAGGCTTCTGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561399.5
CDS CCA 90 bp TCATGTGTAAAGACCCTCTACTTGGAGCCCTTGGGTAGCGAGCTATaGCTTTCTGCTTTATGGGTGGGTGGGGGATGGTGTCTAGAGCCT +
Preference number: 5 (lower is better)
Translates to: SCVKTLYLEPLGSEL*LSALWVGGGWCLEP
Trigger: AGGCTCTAGACACCATCCCCCACCCACCCATAAAGCAGAAAGCCATAGCTCGCTACCCAAGGGCTCCAAGTAGAGGGTCTTTACACATGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526955.1
CDS-3UTR CAA 90 bp TTCTGTGATCACCTAGGGACAGCTGTGGCCTCAAAGTCACCTCCATATGGTTCCACTCCGGACATGGAATaGGGGGAATTCTGCAGGAGG +
Preference number: 5 (lower is better)
Translates to: FCDHLGTAVASKSPPYGSTPDME*GEFCRR
Trigger: CCTCCTGCAGAATTCCCCCAATTCCATGTCCGGAGT...GGAACCATATGGAGGTGACTTTGAGGCCACAGCTGTCCCTAGGTGATCACAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR CAA 90 bp ATACATTCATTTCAGGGAGACCTCGGAAGAGTGACCATCCTTTTGCTCTACCCCGCCACTGGTTATGCTTaGGGGCTCCCTCCTGCCCTT +
Preference number: 5 (lower is better)
Translates to: IHSFQGDLGRVTILLLYPATGYA*GLPPAL
Trigger: AAGGGCAGGAGGGAGCCCCAAAGCATAACCAGTGGC...GGGGTAGAGCAAAAGGATGGTCACTCTTCCGAGGTCTCCCTGAAATGAATGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS TCA 90 bp ACAGCGGCTCAGTCTGCAGACAGGAATAGGAAGTGCAGGATCCTTTaGTGTAACCCCAGGAGGGAGGCAGCAAAATCCCAGGAGTTGATA +
Preference number: 5 (lower is better)
Translates to: TAAQSADRNRKCRIL*CNPRREAAKSQELI
Trigger: TATCAACTCCTGGGATTTTGCTGCCTCCCTCCTGGGGTTACATCAAAGGATCCTGCACTTCCTATTCCTGTCTGCAGACTGAGCCGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526955.1
CDS-3UTR CAA 90 bp TTCTGTGATCACCTAGGGACAGCTGTGGCCTCAAAGTCACCTCCATATGGTTCCGGCTGGGGAGGCATGTaGCATCATGGGATTGATTCA +
Preference number: 5 (lower is better)
Translates to: FCDHLGTAVASKSPPYGSGWGGM*HHGIDS
Trigger: TGAATCAATCCCATGATGCAACATGCCTCCCCAGCC...GGAACCATATGGAGGTGACTTTGAGGCCACAGCTGTCCCTAGGTGATCACAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR CAA 90 bp GACTCCTCGTTTGTTCTTGGACTTCTTATCCTCATTGTCCAGGAGGGAGGTGAGACTCCGGACATGGAATaGGGGGAATTCTGCAGGAGG +
Preference number: 5 (lower is better)
Translates to: DSSFVLGLLILIVQEGGETPDME*GEFCRR
Trigger: CCTCCTGCAGAATTCCCCCAATTCCATGTCCGGAGT...CTCACCTCCCTCCTGGACAATGAGGATAAGAAGTCCAAGAACAAACGAGGAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532623.5
CDS-3UTR CAA 90 bp ACTCCTCGTTTGTTCTTGGACTTCTTATCCTCATTGTCCAGGAGGGAGGTGAGGATCCCCTGGGGGTTATaGGAGACTCCGGACATGGAA +
Preference number: 5 (lower is better)
Translates to: TPRLFLDFLSSLSRREVRIPWGL*ETPDME
Trigger: TTCCATGTCCGGAGTCTCCAATAACCCCCAGGGGAT...CCTCACCTCCCTCCTGGACAATGAGGATAAGAAGTCCAAGAACAAACGAGGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532623.5
CDS-3UTR CAA 90 bp CCATCCAATGAGTCATCGTGTGCAGCCATCATAGCCTGCTGCATGGCCATGGTGCAAGAACGCATTATATaGGTGGCATGCTTGGGCAAG +
Preference number: 5 (lower is better)
Translates to: PSNESSCAAIIACCMAMVQERII*VACLGK
Trigger: CTTGCCCAAGCATGCCACCAATATAATGCGTTCTTG...CACCATGGCCATGCAGCAGGCTATGATGGCTGCACACGATGACTCATTGGATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532623.5
CDS-3UTR CAA 90 bp CTGAAGGTCTATGGAGGGCGTGGAGCACTGAAGGTGGGAACATCTAGGGTAAAATTGATCTTCTTGGCTTaGGGGGCAGGATCTGGGTTG +
Preference number: 5 (lower is better)
Translates to: LKVYGGRGALKVGTSRVKLIFLA*GAGSGL
Trigger: CAACCCAGATCCTGCCCCCAAAGCCAAGAAGATCAA...TTTTACCCTAGATGTTCCCACCTTCAGTGCTCCACGCCCTCCATAGACCTTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR CAA 90 bp TTCCTGCTGGTGGACAAAGTTCTCGATGTCCACATCAAAGCTGGCGGAGGTGATTTGATCTTCTTGGCTTaGGGGGCAGGATCTGGGTTG +
Preference number: 5 (lower is better)
Translates to: FLLVDKVLDVHIKAGGGDLIFLA*GAGSGL
Trigger: CAACCCAGATCCTGCCCCCAAAGCCAAGAAGATCAA...ATCACCTCCGCCAGCTTTGATGTGGACATCGAGAACTTTGTCCACCAGCAGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532623.5
CDS-3UTR CAA 90 bp CCATCCAATGAGTCATCGTGTGCAGCCATCATAGCCTGCTGCATGGCCATGGTGTGTTGCATCATGGGATaGATTCACATGGAGGACTGT +
Preference number: 5 (lower is better)
Translates to: PSNESSCAAIIACCMAMVCCIMG*IHMEDC
Trigger: ACAGTCCTCCATGTGAATCAATCCCATGATGCAACA...CACCATGGCCATGCAGCAGGCTATGATGGCTGCACACGATGACTCATTGGATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532623.5
CDS-3UTR CAA 90 bp TCCTCGTTTGTTCTTGGACTTCTTATCCTCATTGTCCAGGAGGGAGGTGAGGTCGGCTGGGGAGGCATGTaGCATCATGGGATTGATTCA +
Preference number: 5 (lower is better)
Translates to: SSFVLGLLILIVQEGGEVGWGGM*HHGIDS
Trigger: TGAATCAATCCCATGATGCAACATGCCTCCCCAGCC...GACCTCACCTCCCTCCTGGACAATGAGGATAAGAAGTCCAAGAACAAACGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532623.5
CDS-3UTR CAA 90 bp TTCTGTGATCACCTAGGGACAGCTGTGGCCTCAAAGTCACCTCCATATGGTTCCGACACAACTTGTGAGTaGACGGTTGTCATGGCGATG +
Preference number: 5 (lower is better)
Translates to: FCDHLGTAVASKSPPYGSDTTCE*TVVMAM
Trigger: CATCGCCATGACAACCGTCAACTCACAAGTTGTGTC...GGAACCATATGGAGGTGACTTTGAGGCCACAGCTGTCCCTAGGTGATCACAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR CAA 90 bp TTCCTGCTGGTGGACAAAGTTCTCGATGTCCACATCAAAGCTGGCGGAGGTGATTGCAGGTTGTCCAAGTaGATGGAACCATCGGGGTTT +
Preference number: 5 (lower is better)
Translates to: FLLVDKVLDVHIKAGGGDCRLSK*MEPSGF
Trigger: AAACCCCGATGGTTCCATCAACTTGGACAACCTGCA...ATCACCTCCGCCAGCTTTGATGTGGACATCGAGAACTTTGTCCACCAGCAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532623.5
CDS-3UTR CAA 90 bp GCCATCTATCCTCAGGGATTTGGTGAGTCCAGATCTCACTCCTGTCTTTCCACAGACAGGGACTGCAGGTaGTCCAAGTTGATGGAACCA +
Preference number: 5 (lower is better)
Translates to: AIYPQGFGESRSHSCLSTDRDCR*SKLMEP
Trigger: TGGTTCCATCAACTTGGACAACCTGCAGTCCCTGTC...TGTGGAAAGACAGGAGTGAGATCTGGACTCACCAAATCCCTGAGGATAGATGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR CAA 90 bp ACTCCTCGTTTGTTCTTGGACTTCTTATCCTCATTGTCCAGGAGGGAGGTGAGGGACAGGGACTGCAGGTaGTCCAAGTTGATGGAACCA +
Preference number: 5 (lower is better)
Translates to: TPRLFLDFLSSLSRREVRDRDCR*SKLMEP
Trigger: TGGTTCCATCAACTTGGACAACCTGCAGTCCCTGTC...CCTCACCTCCCTCCTGGACAATGAGGATAAGAAGTCCAAGAACAAACGAGGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532623.5
CDS-3UTR CAA 90 bp CTGAAGGTCTATGGAGGGCGTGGAGCACTGAAGGTGGGAACATCTAGGGTAAAAAAACTCAGTCCCCCTTaGTCTCTCCCCTTCCTTCTA +
Preference number: 5 (lower is better)
Translates to: LKVYGGRGALKVGTSRVKKLSPP*SLPFLL
Trigger: TAGAAGGAAGGGGAGAGACAAAGGGGGACTGAGTTT...TTTTACCCTAGATGTTCCCACCTTCAGTGCTCCACGCCCTCCATAGACCTTCAG
51% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR CAA 90 bp CTGGGGGACGCCTGTCCAGGTGGTGAGTGGAACGGTGTGTGTGTGTGTCTGTGTAAAACCATTGTCCTGTaGTTAAAGGAGCTAAGTTCT +
Preference number: 5 (lower is better)
Translates to: LGDACPGGEWNGVCVCLCKTIVL*LKELSS
Trigger: AGAACTTAGCTCCTTTAACAACAGGACAATGGTTTT...ACACAGACACACACACACACCGTTCCACTCACCACCTGGACAGGCGTCCCCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS TCA 90 bp GGTCGAGCGGGGTGGATCGAGTCTGTTGTTTTTACGCTCATTGCCTaGTTTCTTGCGGGCACTCTGACTGTCTGTAGATGCAATAGTTCA +
Preference number: 5 (lower is better)
Translates to: GRAGWIESVVFTLIA*FLAGTLTVCRCNSS
Trigger: TGAACTATTGCATCTACAGACAGTCAGAGTGCCCGCAAGAAATCAGGCAATGAGCGTAAAAACAACAGACTCGATCCACCCCGCTCGACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527238.5
CDS-3UTR CAA 90 bp CCATCCAATGAGTCATCGTGTGCAGCCATCATAGCCTGCTGCATGGCCATGGTGCGGTTACAAAAGTCCTaGCAGAGTTCATTGACTTTC +
Preference number: 5 (lower is better)
Translates to: PSNESSCAAIIACCMAMVRLQKS*QSSLTF
Trigger: GAAAGTCAATGAACTCTGCAAGGACTTTTGTAACCG...CACCATGGCCATGCAGCAGGCTATGATGGCTGCACACGATGACTCATTGGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532623.5
CDS-3UTR CAA 90 bp TCCTCGTTTGTTCTTGGACTTCTTATCCTCATTGTCCAGGAGGGAGGTGAGGTCTCATTCCTGAGCAGGTaGTCGCTGTGCATCTTGGTT +
Preference number: 5 (lower is better)
Translates to: SSFVLGLLILIVQEGGEVSFLSR*SLCILV
Trigger: AACCAAGATGCACAGCGACAACCTGCTCAGGAATGA...GACCTCACCTCCCTCCTGGACAATGAGGATAAGAAGTCCAAGAACAAACGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532623.5
CDS-3UTR CAA 90 bp CTGAAGGTCTATGGAGGGCGTGGAGCACTGAAGGTGGGAACATCTAGGGTAAAACAAGAACGCATTATATaGGTGGCATGCTTGGGCAAG +
Preference number: 5 (lower is better)
Translates to: LKVYGGRGALKVGTSRVKQERII*VACLGK
Trigger: CTTGCCCAAGCATGCCACCAATATAATGCGTTCTTG...TTTTACCCTAGATGTTCCCACCTTCAGTGCTCCACGCCCTCCATAGACCTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR CAA 90 bp GTCATCGCTGAAGAAGGGTTTGTGCTCCTGTTCCTGCTGGTGGACAAAGTTCTCGCATTGATGAACCAGTaGTTTACTTGCAGGAGGGTG +
Preference number: 5 (lower is better)
Translates to: VIAEEGFVLLFLLVDKVLALMNQ*FTCRRV
Trigger: CACCCTCCTGCAAGTAAACAACTGGTTCATCAATGC...GAGAACTTTGTCCACCAGCAGGAACAGGAGCACAAACCCTTCTTCAGCGATGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532623.5
CDS-3UTR CAA 90 bp ATACATTCATTTCAGGGAGACCTCGGAAGAGTGACCATCCTTTTGCTCTACCCCATTGAAGCTCGGTGGTaGGGAAGGAACAGGTGTCTC +
Preference number: 5 (lower is better)
Translates to: IHSFQGDLGRVTILLLYPIEARW*GRNRCL
Trigger: GAGACACCTGTTCCTTCCCAACCACCGAGCTTCAAT...GGGGTAGAGCAAAAGGATGGTCACTCTTCCGAGGTCTCCCTGAAATGAATGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR CAA 90 bp ATACATTCATTTCAGGGAGACCTCGGAAGAGTGACCATCCTTTTGCTCTACCCCTCATTCCTGAGCAGGTaGTCGCTGTGCATCTTGGTT +
Preference number: 5 (lower is better)
Translates to: IHSFQGDLGRVTILLLYPSFLSR*SLCILV
Trigger: AACCAAGATGCACAGCGACAACCTGCTCAGGAATGA...GGGGTAGAGCAAAAGGATGGTCACTCTTCCGAGGTCTCCCTGAAATGAATGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS-3UTR CAA 90 bp ATACATTCATTTCAGGGAGACCTCGGAAGAGTGACCATCCTTTTGCTCTACCCCTTCTCAGGACCTGGATaGCCTTCACCATCAGATTGT +
Preference number: 5 (lower is better)
Translates to: IHSFQGDLGRVTILLLYPFSGPG*PSPSDC
Trigger: ACAATCTGATGGTGAAGGCAATCCAGGTCCTGAGAA...GGGGTAGAGCAAAAGGATGGTCACTCTTCCGAGGTCTCCCTGAAATGAATGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS TCA 90 bp AGGGACAACAGCCTTACTTGGTCCTCTCAGGGGCTCATGAGATTTTaGCCCAAATTTGTTCTAAACCATCACAATTGGGTCTTGGCGCTA +
Preference number: 5 (lower is better)
Translates to: RDNSLTWSSQGLMRF*PKFVLNHHNWVLAL
Trigger: TAGCGCCAAGACCCAATTGTGATGGTTTAGAACAAATTTGGGTCAAAATCTCATGAGCCCCTGAGAGGACCAAGTAAGGCTGTTGTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526955.1
CDS-3UTR CAA 90 bp GCCATCTATCCTCAGGGATTTGGTGAGTCCAGATCTCACTCCTGTCTTTCCACACGGTTACAAAAGTCCTaGCAGAGTTCATTGACTTTC +
Preference number: 5 (lower is better)
Translates to: AIYPQGFGESRSHSCLSTRLQKS*QSSLTF
Trigger: GAAAGTCAATGAACTCTGCAAGGACTTTTGTAACCG...TGTGGAAAGACAGGAGTGAGATCTGGACTCACCAAATCCCTGAGGATAGATGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298282.14
CDS GCA 90 bp GAGAGAGAGAGAGAGAGAGAGAGAAAGACAGAGGAAACAGGGCCATaGAGAGAGAACAGGAGAAGATATGAATTTGCCATAAGCTGTCAA +
Preference number: 5 (lower is better)
Translates to: ERERERERKTEETGP*RENRRRYEFAISCQ
Trigger: TTGACAGCTTATGGCAAATTCATATCTTCTCCTGTTCTCTCTGCATGGCCCTGTTTCCTCTGTCTTTCTCTCTCTCTCTCTCTCTCTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526955.1
CDS CCA 72 bp CAGCTGAGGGGGCAGAGATGTGGACAGCCTGGGCCTTaGAGGGTGGCTGGGCGGTTGCCGTCATTGTTCGGG +
Preference number: 6 (lower is better)
Translates to: QLRGQRCGQPGP*RVAGRLPSLFG
Trigger: CCCGAACAATGACGGCAACCGCCCAGCCACCCTCCAAGGCCCAGGCTGTCCACATCTCTGCCCCCTCAGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000530517.5
ENST00000531116.5
ENST00000561298.1
CDS CAA 90 bp AGCTCCCAGATGCGTTCATCTCTGGGCCGGCTCCACTCGGCCTCCTaGGGCCAGGGAAACAGACTCTTTGCCTCCTCCCCTGCCCGGTCC +
Preference number: 6 (lower is better)
Translates to: SSQMRSSLGRLHSAS*GQGNRLFASSPARS
Trigger: GGACCGGGCAGGGGAGGAGGCAAAGAGTCTGTTTCCCTGGCCCAAGGAGGCCGAGTGGAGCCGGCCCAGAGATGAACGCATCTGGGAGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558729.5
ENST00000561115.5
CDS CCA 72 bp GGCGGTTGCCGTCATCTGTGGGCTGTCCTGGTAGGGTaGGGGCGGGACATTCTGCGTGGCCATCATCGTCAG +
Preference number: 6 (lower is better)
Translates to: GGCRHLWAVLVG*GRDILRGHHRQ
Trigger: CTGACGATGATGGCCACGCAGAATGTCCCGCCCCCACCCTACCAGGACAGCCCACAGATGACGGCAACCGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298282.14
ENST00000527238.5
ENST00000531212.5
ENST00000557814.5
ENST00000558705.1
ENST00000558729.5
ENST00000559662.5
CDS CCA 72 bp CCCCACTCCATCTCACTCTTCCGGGGCGCCTCCAGTTaGGGCTGCAGACCTCGGCATCTCATCAATCGGCCT +
Preference number: 6 (lower is better)
Translates to: PHSISLFRGASS*GCRPRHLINRP
Trigger: AGGCCGATTGATGAGATGCCGAGGTCTGCAGCCCCAACTGGAGGCGCCCCGGAAGAGTGAGATGGAGTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558729.5
ENST00000561115.5
CDS CCA 72 bp TGCGTTCATCTCTGGGCCGGCTCCACTCGGCCTCCTTaGGCCAGGGAAACAGACTCTTTGCCTCCTCCCCTG +
Preference number: 6 (lower is better)
Translates to: CVHLWAGSTRPP*ARETDSLPPPL
Trigger: CAGGGGAGGAGGCAAAGAGTCTGTTTCCCTGGCCCAAGGAGGCCGAGTGGAGCCGGCCCAGAGATGAACGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558729.5
ENST00000561115.5
CDS CCA 72 bp CAAAGCACCTTGGCAGCTCCCAGATGCGTTCATCTCTaGGCCGGCTCCACTCGGCCTCCTTGGGCCAGGGAA +
Preference number: 6 (lower is better)
Translates to: QSTLAAPRCVHL*AGSTRPPWARE
Trigger: TTCCCTGGCCCAAGGAGGCCGAGTGGAGCCGGCCCAGAGATGAACGCATCTGGGAGCTGCCAAGGTGCTTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558729.5
ENST00000561115.5
CDS CAA 72 bp AGGAGCGGGAAAAGAGGGTGCCTGTATACAGCTCGCTaGTCAGCCTCCAGCTGGGCCTGGGGGTCGATGGGG +
Preference number: 6 (lower is better)
Translates to: RSGKRGCLYTAR*SASSWAWGSMG
Trigger: CCCCATCGACCCCCAGGCCCAGCTGGAGGCTGACAAGCGAGCTGTATACAGGCACCCTCTTTTCCCGCTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000298282.14
ENST00000530517.5
ENST00000531116.5
ENST00000558705.1
ENST00000561298.1
CDS GCA 72 bp TCCATCTCACTCTTCCGGGGCGCCTCCAGTTGGGGCTaGAGACCTCGGCATCTCATCAATCGGCCTCTCTGC +
Preference number: 6 (lower is better)
Translates to: SISLFRGASSWG*RPRHLINRPLC
Trigger: GCAGAGAGGCCGATTGATGAGATGCCGAGGTCTGCAGCCCCAACTGGAGGCGCCCCGGAAGAGTGAGATGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558729.5
ENST00000561115.5
CDS CAA 90 bp CACCGACCTGACACAACTTGTGAGTTGACGGTTGTCATGGCGATGTaGCCCTGCTGGAGCGCTGAGGCTGGGACCACAATCCCCTGGGGG +
Preference number: 6 (lower is better)
Translates to: HRPDTTCELTVVMAM*PCWSAEAGTTIPWG
Trigger: CCCCCAGGGGATTGTGGTCCCAGCCTCAGCGCTCCAGCAGGGCAACATCGCCATGACAACCGTCAACTCACAAGTTGTGTCAGGTCGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526955.1
CDS TCA 72 bp GAGCGGGGGCTGGGGAGGCATGTTGCATCATGGGATTaGTTCACATGGAGGACTGTTCGGGTGATCCCGGGG +
Preference number: 6 (lower is better)
Translates to: ERGLGRHVASWD*FTWRTVRVIPG
Trigger: CCCCGGGATCACCCGAACAGTCCTCCATGTGAATCAATCCCATGATGCAACATGCCTCCCCAGCCCCCGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000298282.14
ENST00000531212.5
ENST00000532623.5
ENST00000558705.1
ENST00000558729.5
ENST00000559662.5
CDS TCA 72 bp CCCAGTCTTTGCACCGACCTGACACAACTTGTGAGTTaGCGGTTGTCATGGCGATGTTGCCCTGCTGGAGCG +
Preference number: 6 (lower is better)
Translates to: PSLCTDLTQLVS*RLSWRCCPAGA
Trigger: CGCTCCAGCAGGGCAACATCGCCATGACAACCGTCAACTCACAAGTTGTGTCAGGTCGGTGCAAAGACTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526955.1
CDS CCA 72 bp GAGCTATGGCTTTCTGCTTTATGGGTGGGTGGGGGATaGTGTCTAGAGCCTAGGACAGAGCCTCTGGTGGGA +
Preference number: 6 (lower is better)
Translates to: ELWLSALWVGGG*CLEPRTEPLVG
Trigger: TCCCACCAGAGGCTCTGTCCTAGGCTCTAGACACCATCCCCCACCCACCCATAAAGCAGAAAGCCATAGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526955.1
CDS CCA 72 bp GAGCCCTTGGGTAGCGAGCTATGGCTTTCTGCTTTATaGGTGGGTGGGGGATGGTGTCTAGAGCCTAGGACA +
Preference number: 6 (lower is better)
Translates to: EPLGSELWLSAL*VGGGWCLEPRT
Trigger: TGTCCTAGGCTCTAGACACCATCCCCCACCCACCCATAAAGCAGAAAGCCATAGCTCGCTACCCAAGGGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526955.1
CDS CCA 72 bp ACACACCTACACACACTCACCTGTGTGTTCTGGATCTaGATGGCTCCCTGGGGGATTGCTTGGGTGACCACC +
Preference number: 6 (lower is better)
Translates to: THLHTLTCVFWI*MAPWGIAWVTT
Trigger: GGTGGTCACCCAAGCAATCCCCCAGGGAGCCATCCAGATCCAGAACACACAGGTGAGTGTGTGTAGGTGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526955.1
CDS CAA 90 bp AATCACCCTTCCCAGTCTTTGCACCGACCTGACACAACTTGTGAGTaGACGGTTGTCATGGCGATGTTGCCCTGCTGGAGCGCTGAGGCT +
Preference number: 6 (lower is better)
Translates to: NHPSQSLHRPDTTCE*TVVMAMLPCWSAEA
Trigger: AGCCTCAGCGCTCCAGCAGGGCAACATCGCCATGACAACCGTCAACTCACAAGTTGTGTCAGGTCGGTGCAAAGACTGGGAAGGGTGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526955.1
CDS TCA 72 bp CACCTGATGCCAATCTTCATCAGACTGACACCGGCGTaGCAACACAGCCTATACTTCCCAGCACTGCTCGGG +
Preference number: 6 (lower is better)
Translates to: HLMPIFIRLTPA*QHSLYFPALLG
Trigger: CCCGAGCAGTGCTGGGAAGTATAGGCTGTGTTGTCACGCCGGTGTCAGTCTGATGAAGATTGGCATCAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530517.5
ENST00000531116.5
CDS CCA 72 bp GACATTCTGCGTGGCCATCATCGTCAGAGCGGGGGCTaGGGAGGCATGTTGCATCATGGGATTGATTCACAT +
Preference number: 6 (lower is better)
Translates to: DILRGHHRQSGG*GGMLHHGIDSH
Trigger: ATGTGAATCAATCCCATGATGCAACATGCCTCCCCAGCCCCCGCTCTGACGATGATGGCCACGCAGAATGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298282.14
ENST00000527238.5
ENST00000531212.5
ENST00000532623.5
ENST00000557814.5
ENST00000558705.1
ENST00000558729.5
ENST00000559662.5
CDS CCA 72 bp GGTAGGAGCGAGGGCAAGCAGGGTTCCCAGTTCATTTaGCACTCATGTGTAAAGACCCTCTACTTGGAGCCC +
Preference number: 6 (lower is better)
Translates to: GRSEGKQGSQFI*HSCVKTLYLEP
Trigger: GGGCTCCAAGTAGAGGGTCTTTACACATGAGTGCCAAATGAACTGGGAACCCTGCTTGCCCTCGCTCCTACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526955.1
CDS CAA 72 bp TCCCAGTCTTTGCACCGACCTGACACAACTTGTGAGTaGACGGTTGTCATGGCGATGTTGCCCTGCTGGAGC +
Preference number: 6 (lower is better)
Translates to: SQSLHRPDTTCE*TVVMAMLPCWS
Trigger: GCTCCAGCAGGGCAACATCGCCATGACAACCGTCAACTCACAAGTTGTGTCAGGTCGGTGCAAAGACTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526955.1
CDS CAA 90 bp CCCTTTCTCCTCCCAGGGAATTCCCACAATCACCCTTCCCAGTCTTaGCACCGACCTGACACAACTTGTGAGTTGACGGTTGTCATGGCG +
Preference number: 6 (lower is better)
Translates to: PFLLPGNSHNHPSQS*HRPDTTCELTVVMA
Trigger: CGCCATGACAACCGTCAACTCACAAGTTGTGTCAGGTCGGTGCAAAGACTGGGAAGGGTGATTGTGGGAATTCCCTGGGAGGAGAAAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526955.1
CDS TCA 72 bp ACTCCTAAGAAAAGCTTCAGCACAATGCCAGAAATCTaGGCATTTCTCCGGTGGAGGCCAGGTGGAGGGGCT +
Preference number: 6 (lower is better)
Translates to: TPKKSFSTMPEI*AFLRWRPGGGA
Trigger: AGCCCCTCCACCTGGCCTCCACCGGAGAAATGCTCAGATTTCTGGCATTGTGCTGAAGCTTTTCTTAGGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561399.5
CDS CCA 72 bp CCTCAGGAGACTCACTCCCCTCTTTCTACTTCCAGCTaGGCCAGAATTTCTTCCTGTCTGCTAGAGCCAAAG +
Preference number: 6 (lower is better)
Translates to: PQETHSPLSTSS*ARISSCLLEPK
Trigger: CTTTGGCTCTAGCAGACAGGAAGAAATTCTGGCCCAGCTGGAAGTAGAAAGAGGGGAGTGAGTCTCCTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000298282.14
ENST00000527238.5
ENST00000530517.5
ENST00000531116.5
ENST00000531212.5
ENST00000532623.5
ENST00000558705.1
ENST00000558729.5
ENST00000559662.5
ENST00000561115.5
ENST00000561298.1
CDS CCA 72 bp GCCTCAGAAGTCCTGCTCCAGACTTCACCAGCTGTGTaGCTTGGGCCTTTGCCATATGTGAAAATGGGGATA +
Preference number: 6 (lower is better)
Translates to: ASEVLLQTSPAV*LGPLPYVKMGI
Trigger: TATCCCCATTTTCACATATGGCAAAGGCCCAAGCCACACAGCTGGTGAAGTCTGGAGCAGGACTTCTGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531212.5
CDS CAA 72 bp CTCCCAGGGAATTCCCACAATCACCCTTCCCAGTCTTaGCACCGACCTGACACAACTTGTGAGTTGACGGTT +
Preference number: 6 (lower is better)
Translates to: LPGNSHNHPSQS*HRPDTTCELTV
Trigger: AACCGTCAACTCACAAGTTGTGTCAGGTCGGTGCAAAGACTGGGAAGGGTGATTGTGGGAATTCCCTGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526955.1
CDS CAA 72 bp CATCGCTGTGGTTCATTCTCACAGCAGCCCTGTAGGTaGGCTAGGCTGTGTGCAGTTGCTATTAATCCCCCT +
Preference number: 6 (lower is better)
Translates to: HRCGSFSQQPCR*ARLCAVAINPP
Trigger: AGGGGGATTAATAGCAACTGCACACAGCCTAGCCAACCTACAGGGCTGCTGTGAGAATGAACCACAGCGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526955.1
CDS CAA 90 bp CAGTTCATTTGGCACTCATGTGTAAAGACCCTCTACTTGGAGCCCTaGGGTAGCGAGCTATGGCTTTCTGCTTTATGGGTGGGTGGGGGA +
Preference number: 6 (lower is better)
Translates to: QFIWHSCVKTLYLEP*GSELWLSALWVGGG
Trigger: TCCCCCACCCACCCATAAAGCAGAAAGCCATAGCTCGCTACCCAAGGGCTCCAAGTAGAGGGTCTTTACACATGAGTGCCAAATGAACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526955.1
CDS CAA 90 bp CAGGGTTCCCAGTTCATTTGGCACTCATGTGTAAAGACCCTCTACTaGGAGCCCTTGGGTAGCGAGCTATGGCTTTCTGCTTTATGGGTG +
Preference number: 6 (lower is better)
Translates to: QGSQFIWHSCVKTLY*EPLGSELWLSALWV
Trigger: CACCCATAAAGCAGAAAGCCATAGCTCGCTACCCAAGGGCTCCAAGTAGAGGGTCTTTACACATGAGTGCCAAATGAACTGGGAACCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526955.1
CDS CCA 72 bp ATCGCTGTGGTTCATTCTCACAGCAGCCCTGTAGGTTaGCTAGGCTGTGTGCAGTTGCTATTAATCCCCCTT +
Preference number: 6 (lower is better)
Translates to: IAVVHSHSSPVG*LGCVQLLLIPL
Trigger: AAGGGGGATTAATAGCAACTGCACACAGCCTAGCCAACCTACAGGGCTGCTGTGAGAATGAACCACAGCGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526955.1
CDS CAA 72 bp CATCAAGATCTGGTCGAGCGGGGTGGATCGAGTCTGTaGTTTTTACGCTCATTGCCTGATTTCTTGCGGGCA +
Preference number: 6 (lower is better)
Translates to: HQDLVERGGSSL*FLRSLPDFLRA
Trigger: TGCCCGCAAGAAATCAGGCAATGAGCGTAAAAACAACAGACTCGATCCACCCCGCTCGACCAGATCTTGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527238.5
CDS TCA 72 bp GGGTGGATCGAGTCTGTTGTTTTTACGCTCATTGCCTaGTTTCTTGCGGGCACTCTGACTGTCTGTAGATGC +
Preference number: 6 (lower is better)
Translates to: GWIESVVFTLIA*FLAGTLTVCRC
Trigger: GCATCTACAGACAGTCAGAGTGCCCGCAAGAAATCAGGCAATGAGCGTAAAAACAACAGACTCGATCCACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527238.5
CDS TCA 72 bp CTGGCCTCTCTTTCATTAGCAGTCTGTCACAAAGCGTaGAGGGCTTCCATAAATTCTGCAGCTCAGCAGCTG +
Preference number: 6 (lower is better)
Translates to: LASLSLAVCHKA*RASINSAAQQL
Trigger: CAGCTGCTGAGCTGCAGAATTTATGGAAGCCCTTCACGCTTTGTGACAGACTGCTAATGAAAGAGAGGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561399.5
CDS CAA 72 bp CAGTTCATTTGGCACTCATGTGTAAAGACCCTCTACTaGGAGCCCTTGGGTAGCGAGCTATGGCTTTCTGCT +
Preference number: 6 (lower is better)
Translates to: QFIWHSCVKTLY*EPLGSELWLSA
Trigger: AGCAGAAAGCCATAGCTCGCTACCCAAGGGCTCCAAGTAGAGGGTCTTTACACATGAGTGCCAAATGAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526955.1
CDS CAA 72 bp GATTCACATGGAGGACAAAATCCTGGGCAAGGTCCTTaGGAGTTGGGGCCCAATCTCACCATAACAGATCCA +
Preference number: 6 (lower is better)
Translates to: DSHGGQNPGQGP*ELGPNLTITDP
Trigger: TGGATCTGTTATGGTGAGATTGGGCCCCAACTCCAAAGGACCTTGCCCAGGATTTTGTCCTCCATGTGAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527238.5
CDS GCA 72 bp AGTCTCAGAGAACTCCTAAGAAAAGCTTCAGCACAATaGCAGAAATCTGAGCATTTCTCCGGTGGAGGCCAG +
Preference number: 6 (lower is better)
Translates to: SLRELLRKASAQ*QKSEHFSGGGQ
Trigger: CTGGCCTCCACCGGAGAAATGCTCAGATTTCTGGCATTGTGCTGAAGCTTTTCTTAGGAGTTCTCTGAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561399.5
CDS CAA 90 bp AAGGGACAACAGCCTTACTTGGTCCTCTCAGGGGCTCATGAGATTTaGACCCAAATTTGTTCTAAACCATCACAATTGGGTCTTGGCGCT +
Preference number: 6 (lower is better)
Translates to: KGQQPYLVLSGAHEI*TQICSKPSQLGLGA
Trigger: AGCGCCAAGACCCAATTGTGATGGTTTAGAACAAATTTGGGTCAAAATCTCATGAGCCCCTGAGAGGACCAAGTAAGGCTGTTGTCCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526955.1
CDS TCA 72 bp TCAGAGATCCCAGAGTTAATGTCAGATCCCAGACTCTaGCTTCCGATCTTTCTACTCTTCCTTTGTGTGTGC +
Preference number: 6 (lower is better)
Translates to: SEIPELMSDPRL*LPIFLLFLCVC
Trigger: GCACACACAAAGGAAGAGTAGAAAGATCGGAAGTCAGAGTCTGGGATCTGACATTAACTCTGGGATCTCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526955.1
CDS TCA 72 bp TTTTTACGCTCATTGCCTGATTTCTTGCGGGCACTCTaGCTGTCTGTAGATGCAATAGTTCACAGCCCCTTT +
Preference number: 6 (lower is better)
Translates to: FLRSLPDFLRAL*LSVDAIVHSPF
Trigger: AAAGGGGCTGTGAACTATTGCATCTACAGACAGTCAGAGTGCCCGCAAGAAATCAGGCAATGAGCGTAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527238.5
CDS GCA 72 bp AGAGAGAGAGAGAGAAAGACAGAGGAAACAGGGCCATaGAGAGAGAACAGGAGAAGATATGAATTTGCCATA +
Preference number: 6 (lower is better)
Translates to: RERERKTEETGP*RENRRRYEFAI
Trigger: TATGGCAAATTCATATCTTCTCCTGTTCTCTCTGCATGGCCCTGTTTCCTCTGTCTTTCTCTCTCTCTCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526955.1
CDS CAA 72 bp CAGCCTTACTTGGTCCTCTCAGGGGCTCATGAGATTTaGACCCAAATTTGTTCTAAACCATCACAATTGGGT +
Preference number: 6 (lower is better)
Translates to: QPYLVLSGAHEI*TQICSKPSQLG
Trigger: ACCCAATTGTGATGGTTTAGAACAAATTTGGGTCAAAATCTCATGAGCCCCTGAGAGGACCAAGTAAGGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526955.1