RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PKIG (Homo sapiens)

Ensembl gene IDs: ENSG00000168734

Ensembl transcript IDs: ENST00000349959.3, ENST00000372886.6, ENST00000372887.5, ENST00000372889.5, ENST00000372891.7, ENST00000372892.7, ENST00000372894.7, ENST00000477390.5

Found 357 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GACAGGGTCCCTGCCCGGGCCGCTCGCGAGAGGAGCGTTCCTGTGTaGGCTGCTCACTGTAGGGCAGGCCCCGCCCAAGTCCCGGCGCCA +
Preference number: 1 (lower is better)
Translates to: DRVPARAARERSVPV*AAHCRAGPAQVPAP
Trigger: TGGCGCCGGGACTTGGGCGGGGCCTGCCCTACAGTGAGCAGCCCACACAGGAACGCTCCTCTCGCGAGCGGCCCGGGCAGGGACCCTGTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
3UTR CCA 90 bp GGCCTCTGGGGAGCCTTCTCAGTCTGGCCTGGTTTATCTGGGACATaGAGCTCAGAGAAGAGGCTGCTGGGCCAGTGCCAGGGTTCCCCC +
Preference number: 1 (lower is better)
Translates to: GLWGAFSVWPGLSGT*SSEKRLLGQCQGSP
Trigger: GGGGGAACCCTGGCACTGGCCCAGCAGCCTCTTCTCTGAGCTCCATGTCCCAGATAAACCAGGCCAGACTGAGAAGGCTCCCCAGAGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
3UTR CCA 90 bp GAGCTCAGAGAAGAGGCTGCTGGGCCAGTGCCAGGGTTCCCCCTCTaGGAGGGGACAGAAGGTCTCTCGTCCAGCCTTCTTGGACAAGGT +
Preference number: 1 (lower is better)
Translates to: ELREEAAGPVPGFPL*EGTEGLSSSLLGQG
Trigger: ACCTTGTCCAAGAAGGCTGGACGAGAGACCTTCTGTCCCCTCCCAGAGGGGGAACCCTGGCACTGGCCCAGCAGCCTCTTCTCTGAGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
3UTR CCA 90 bp TGTGGTTACAGTGTCTTGAAAGTGTACCTGGGCACGGTGCGAAGGTaGTGGGAATGTGAAGCCTGTGGGTGTGGGCAGAGGGCTTTCCCG +
Preference number: 1 (lower is better)
Translates to: CGYSVLKVYLGTVRR*WECEACGCGQRAFP
Trigger: CGGGAAAGCCCTCTGCCCACACCCACAGGCTTCACATTCCCACCACCTTCGCACCGTGCCCAGGTACACTTTCAAGACACTGTAACCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
3UTR CCA 90 bp GGCCTACCAGGTGGGTCCTGTGAGAAGGAATGGAGAGGCTGGCCCTaGGTGAGCTTGTCTCCCACCCATAGTTGGGAGAAATCACAAGAA +
Preference number: 1 (lower is better)
Translates to: GLPGGSCEKEWRGWP*VSLSPTHSWEKSQE
Trigger: TTCTTGTGATTTCTCCCAACTATGGGTGGGAGACAAGCTCACCCAGGGCCAGCCTCTCCATTCCTTCTCACAGGACCCACCTGGTAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372887.5
3UTR CCA 90 bp AGGCCCCGCCCAAGTCCCGGCGCCAGCTCAATAAATAACATCTTGTaGTTACAGTGTCTTGAAAGTGTACCTGGGCACGGTGCGAAGGTG +
Preference number: 1 (lower is better)
Translates to: RPRPSPGASSINNIL*LQCLESVPGHGAKV
Trigger: CACCTTCGCACCGTGCCCAGGTACACTTTCAAGACACTGTAACCACAAGATGTTATTTATTGAGCTGGCGCCGGGACTTGGGCGGGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
3UTR CCA 90 bp AACCAGGGACCATGGTGTCTCCTGAGTTCTGAAGTGTGTCTTTGTTaGGTCTTAAGGCTTGGAACTGGAATCCCCCTGGGCCAGGCGTGG +
Preference number: 1 (lower is better)
Translates to: NQGPWCLLSSEVCLC*VLRLGTGIPLGQAW
Trigger: CCACGCCTGGCCCAGGGGGATTCCAGTTCCAAGCCTTAAGACCCAACAAAGACACACTTCAGAACTCAGGAGACACCATGGTCCCTGGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372887.5
3UTR CCA 90 bp GAATGGAGAGGCTGGCCCTGGGTGAGCTTGTCTCCCACCCATAGTTaGGAGAAATCACAAGAACCAGGGACCATGGTGTCTCCTGAGTTC +
Preference number: 1 (lower is better)
Translates to: EWRGWPWVSLSPTHS*EKSQEPGTMVSPEF
Trigger: GAACTCAGGAGACACCATGGTCCCTGGTTCTTGTGATTTCTCCCAACTATGGGTGGGAGACAAGCTCACCCAGGGCCAGCCTCTCCATTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372887.5
3UTR TCA 90 bp TGGGAGAAATCACAAGAACCAGGGACCATGGTGTCTCCTGAGTTCTaGAGTGTGTCTTTGTTGGGTCTTAAGGCTTGGAACTGGAATCCC +
Preference number: 1 (lower is better)
Translates to: WEKSQEPGTMVSPEF*SVSLLGLKAWNWNP
Trigger: GGGATTCCAGTTCCAAGCCTTAAGACCCAACAAAGACACACTTCAGAACTCAGGAGACACCATGGTCCCTGGTTCTTGTGATTTCTCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372887.5
3UTR CCA 90 bp ATCATCGGCATTTATTTCCTGGGTCCTAGGTGTCACTTATCCTGGTaGACAGGGCAGAGGTGGTCAGATCGTTTTGAGCCAAAATCCCTT +
Preference number: 1 (lower is better)
Translates to: IIGIYFLGPRCHLSW*TGQRWSDRFEPKSL
Trigger: AAGGGATTTTGGCTCAAAACGATCTGACCACCTCTGCCCTGTCCACCAGGATAAGTGACACCTAGGACCCAGGAAATAAATGCCGATGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
3UTR CCA 90 bp CAAATCATCGGCATTTATTTCCTGGGTCCTAGGTGTCACTTATCCTaGTGGACAGGGCAGAGGTGGTCAGATCGTTTTGAGCCAAAATCC +
Preference number: 1 (lower is better)
Translates to: QIIGIYFLGPRCHLS*WTGQRWSDRFEPKS
Trigger: GGATTTTGGCTCAAAACGATCTGACCACCTCTGCCCTGTCCACCAGGATAAGTGACACCTAGGACCCAGGAAATAAATGCCGATGATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
3UTR CCA 90 bp TGTCTCCCACCCATAGTTGGGAGAAATCACAAGAACCAGGGACCATaGTGTCTCCTGAGTTCTGAAGTGTGTCTTTGTTGGGTCTTAAGG +
Preference number: 1 (lower is better)
Translates to: CLPPIVGRNHKNQGP*CLLSSEVCLCWVLR
Trigger: CCTTAAGACCCAACAAAGACACACTTCAGAACTCAGGAGACACCATGGTCCCTGGTTCTTGTGATTTCTCCCAACTATGGGTGGGAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372887.5
3UTR-3UTR GCA 90 bp GTGTTGGTGTTGGGACAGGGTCCCTGCCCGGGCCGCTCGCGAGAGGAGCGTTCCAGGCTGCTGGGCCAGTaGCAGGGTTCCCCCTCTGGG +
Preference number: 2 (lower is better)
Translates to: VLVLGQGPCPGRSREERSRLLGQ*QGSPSG
Trigger: CCCAGAGGGGGAACCCTGGCACTGGCCCAGCAGCCT...GGAACGCTCCTCTCGCGAGCGGCCCGGGCAGGGACCCTGTCCCAACACCAACAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
3UTR-3UTR CCA 90 bp TGTTGGGACAGGGTCCCTGCCCGGGCCGCTCGCGAGAGGAGCGTTCCTGTGTGGCCAGGGTTCCCCCTCTaGGAGGGGACAGAAGGTCTC +
Preference number: 2 (lower is better)
Translates to: CWDRVPARAARERSVPVWPGFPL*EGTEGL
Trigger: GAGACCTTCTGTCCCCTCCCAGAGGGGGAACCCTGG...CCACACAGGAACGCTCCTCTCGCGAGCGGCCCGGGCAGGGACCCTGTCCCAACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
3UTR-3UTR CCA 90 bp GTTGGTGTTGGGACAGGGTCCCTGCCCGGGCCGCTCGCGAGAGGAGCGTTCCTGGGCCACAGAGGCCTCTaGGGAGCCTTCTCAGTCTGG +
Preference number: 2 (lower is better)
Translates to: VGVGTGSLPGPLARGAFLGHRGL*GAFSVW
Trigger: CCAGACTGAGAAGGCTCCCCAGAGGCCTCTGTGGCC...CAGGAACGCTCCTCTCGCGAGCGGCCCGGGCAGGGACCCTGTCCCAACACCAAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
3UTR-3UTR CCA 90 bp GTTGGTGTTGGGACAGGGTCCCTGCCCGGGCCGCTCGCGAGAGGAGCGTTCCTGAGGGCTTTCCCGGAGTaGAGGCCACAGAGGCCTCTG +
Preference number: 2 (lower is better)
Translates to: VGVGTGSLPGPLARGAFLRAFPE*RPQRPL
Trigger: CAGAGGCCTCTGTGGCCTCCACTCCGGGAAAGCCCT...CAGGAACGCTCCTCTCGCGAGCGGCCCGGGCAGGGACCCTGTCCCAACACCAAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
3UTR-3UTR CCA 90 bp TCCCTGCCCGGGCCGCTCGCGAGAGGAGCGTTCCTGTGTGGGCTGCTCACTGTACCAGGGTTCCCCCTCTaGGAGGGGACAGAAGGTCTC +
Preference number: 2 (lower is better)
Translates to: SLPGPLARGAFLCGLLTVPGFPL*EGTEGL
Trigger: GAGACCTTCTGTCCCCTCCCAGAGGGGGAACCCTGG...TACAGTGAGCAGCCCACACAGGAACGCTCCTCTCGCGAGCGGCCCGGGCAGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
3UTR-3UTR CCA 90 bp AGCGTTCCTGTGTGGGCTGCTCACTGTAGGGCAGGCCCCGCCCAAGTCCCGGCGACGGTGCGAAGGTGGTaGGAATGTGAAGCCTGTGGG +
Preference number: 2 (lower is better)
Translates to: SVPVWAAHCRAGPAQVPATVRRW*ECEACG
Trigger: CCCACAGGCTTCACATTCCCACCACCTTCGCACCGT...CGCCGGGACTTGGGCGGGGCCTGCCCTACAGTGAGCAGCCCACACAGGAACGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
3UTR-3UTR CCA 90 bp GTTGGTGTTGGGACAGGGTCCCTGCCCGGGCCGCTCGCGAGAGGAGCGTTCCTGGGCACGGTGCGAAGGTaGTGGGAATGTGAAGCCTGT +
Preference number: 2 (lower is better)
Translates to: VGVGTGSLPGPLARGAFLGTVRR*WECEAC
Trigger: ACAGGCTTCACATTCCCACCACCTTCGCACCGTGCC...CAGGAACGCTCCTCTCGCGAGCGGCCCGGGCAGGGACCCTGTCCCAACACCAAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
3UTR-3UTR GCA 90 bp TCCCTGCCCGGGCCGCTCGCGAGAGGAGCGTTCCTGTGTGGGCTGCTCACTGTATGTACCTGGGCACGGTaGGAAGGTGGTGGGAATGTG +
Preference number: 2 (lower is better)
Translates to: SLPGPLARGAFLCGLLTVCTWAR*EGGGNV
Trigger: CACATTCCCACCACCTTCGCACCGTGCCCAGGTACA...TACAGTGAGCAGCCCACACAGGAACGCTCCTCTCGCGAGCGGCCCGGGCAGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
3UTR-3UTR TCA 90 bp AGCGTTCCTGTGTGGGCTGCTCACTGTAGGGCAGGCCCCGCCCAAGTCCCGGCGGTGGTTACAGTGTCTTaGAAGTGTACCTGGGCACGG +
Preference number: 2 (lower is better)
Translates to: SVPVWAAHCRAGPAQVPAVVTVS*KCTWAR
Trigger: CCGTGCCCAGGTACACTTTCAAGACACTGTAACCAC...CGCCGGGACTTGGGCGGGGCCTGCCCTACAGTGAGCAGCCCACACAGGAACGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
3UTR-3UTR CCA 90 bp GTTGGTGTTGGGACAGGGTCCCTGCCCGGGCCGCTCGCGAGAGGAGCGTTCCTGGGAGCCTTCTCAGTCTaGCCTGGTTTATCTGGGACA +
Preference number: 2 (lower is better)
Translates to: VGVGTGSLPGPLARGAFLGAFSV*PGLSGT
Trigger: TGTCCCAGATAAACCAGGCCAGACTGAGAAGGCTCC...CAGGAACGCTCCTCTCGCGAGCGGCCCGGGCAGGGACCCTGTCCCAACACCAAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
3UTR-3UTR CCA 90 bp AGCGTTCCTGTGTGGGCTGCTCACTGTAGGGCAGGCCCCGCCCAAGTCCCGGCGGGAGCCTTCTCAGTCTaGCCTGGTTTATCTGGGACA +
Preference number: 2 (lower is better)
Translates to: SVPVWAAHCRAGPAQVPAGAFSV*PGLSGT
Trigger: TGTCCCAGATAAACCAGGCCAGACTGAGAAGGCTCC...CGCCGGGACTTGGGCGGGGCCTGCCCTACAGTGAGCAGCCCACACAGGAACGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
3UTR-3UTR TCA 90 bp TCCCTGCCCGGGCCGCTCGCGAGAGGAGCGTTCCTGTGTGGGCTGCTCACTGTAGTGGTTACAGTGTCTTaGAAGTGTACCTGGGCACGG +
Preference number: 2 (lower is better)
Translates to: SLPGPLARGAFLCGLLTVVVTVS*KCTWAR
Trigger: CCGTGCCCAGGTACACTTTCAAGACACTGTAACCAC...TACAGTGAGCAGCCCACACAGGAACGCTCCTCTCGCGAGCGGCCCGGGCAGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
3UTR-3UTR CCA 90 bp AGCGTTCCTGTGTGGGCTGCTCACTGTAGGGCAGGCCCCGCCCAAGTCCCGGCGCTTCTCAGTCTGGCCTaGTTTATCTGGGACATGGAG +
Preference number: 2 (lower is better)
Translates to: SVPVWAAHCRAGPAQVPALLSLA*FIWDME
Trigger: CTCCATGTCCCAGATAAACCAGGCCAGACTGAGAAG...CGCCGGGACTTGGGCGGGGCCTGCCCTACAGTGAGCAGCCCACACAGGAACGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
3UTR-3UTR GCA 90 bp GGTTACAGTGTCTTGAAAGTGTACCTGGGCACGGTGCGAAGGTGGTGGGAATGTAGGCTGCTGGGCCAGTaGCAGGGTTCCCCCTCTGGG +
Preference number: 2 (lower is better)
Translates to: GYSVLKVYLGTVRRWWECRLLGQ*QGSPSG
Trigger: CCCAGAGGGGGAACCCTGGCACTGGCCCAGCAGCCT...ACATTCCCACCACCTTCGCACCGTGCCCAGGTACACTTTCAAGACACTGTAACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
3UTR-3UTR CCA 90 bp TGGGTCCTAGGTGTCACTTATCCTGGTGGACAGGGCAGAGGTGGTCAGATCGTTCCAGGGTTCCCCCTCTaGGAGGGGACAGAAGGTCTC +
Preference number: 2 (lower is better)
Translates to: WVLGVTYPGGQGRGGQIVPGFPL*EGTEGL
Trigger: GAGACCTTCTGTCCCCTCCCAGAGGGGGAACCCTGG...AACGATCTGACCACCTCTGCCCTGTCCACCAGGATAAGTGACACCTAGGACCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
3UTR-3UTR CCA 90 bp TGGGTCCTAGGTGTCACTTATCCTGGTGGACAGGGCAGAGGTGGTCAGATCGTTAGGAGGTGTTGGTGTTaGGACAGGGTCCCTGCCCGG +
Preference number: 2 (lower is better)
Translates to: WVLGVTYPGGQGRGGQIVRRCWC*DRVPAR
Trigger: CCGGGCAGGGACCCTGTCCCAACACCAACACCTCCT...AACGATCTGACCACCTCTGCCCTGTCCACCAGGATAAGTGACACCTAGGACCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
3UTR CAA 90 bp GGCAGGCCCCGCCCAAGTCCCGGCGCCAGCTCAATAAATAACATCTaGTGGTTACAGTGTCTTGAAAGTGTACCTGGGCACGGTGCGAAG +
Preference number: 2 (lower is better)
Translates to: GRPRPSPGASSINNI*WLQCLESVPGHGAK
Trigger: CTTCGCACCGTGCCCAGGTACACTTTCAAGACACTGTAACCACAAGATGTTATTTATTGAGCTGGCGCCGGGACTTGGGCGGGGCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
3UTR-3UTR GCA 90 bp CCTAAAAATGGATCTGTGGAGCTCCATGAGGGAACCTCAGAGATGCACAATGACAGGCTGCTGGGCCAGTaGCAGGGTTCCCCCTCTGGG +
Preference number: 2 (lower is better)
Translates to: PKNGSVELHEGTSEMHNDRLLGQ*QGSPSG
Trigger: CCCAGAGGGGGAACCCTGGCACTGGCCCAGCAGCCT...GTCATTGTGCATCTCTGAGGTTCCCTCATGGAGCTCCACAGATCCATTTTTAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
3UTR-3UTR GCA 90 bp TCTGTGGAGCTCCATGAGGGAACCTCAGAGATGCACAATGACAGTTTAGCTAAATTGGGACAGGGTCCCTaGCCGGGCCGCTCGCGAGAG +
Preference number: 2 (lower is better)
Translates to: SVELHEGTSEMHNDSLAKLGQGP*PGRSRE
Trigger: CTCTCGCGAGCGGCCCGGGCAGGGACCCTGTCCCAA...TTTAGCTAAACTGTCATTGTGCATCTCTGAGGTTCCCTCATGGAGCTCCACAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
3UTR-3UTR TCA 90 bp ACATGTCCAGGCCTACCAGGTGGGTCCTGTGAGAAGGAATGGAGAGGCTGGCCCGACCATGGTGTCTCCTaGGTTCTGAAGTGTGTCTTT +
Preference number: 2 (lower is better)
Translates to: TCPGLPGGSCEKEWRGWPDHGVS*VLKCVF
Trigger: AAAGACACACTTCAGAACTCAGGAGACACCATGGTC...GGGCCAGCCTCTCCATTCCTTCTCACAGGACCCACCTGGTAGGCCTGGACATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372887.5
3UTR-3UTR GCA 90 bp CAAATCATCGGCATTTATTTCCTGGGTCCTAGGTGTCACTTATCCTGGTGGACAAGGCTGCTGGGCCAGTaGCAGGGTTCCCCCTCTGGG +
Preference number: 2 (lower is better)
Translates to: QIIGIYFLGPRCHLSWWTRLLGQ*QGSPSG
Trigger: CCCAGAGGGGGAACCCTGGCACTGGCCCAGCAGCCT...TGTCCACCAGGATAAGTGACACCTAGGACCCAGGAAATAAATGCCGATGATTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
3UTR-3UTR CCA 90 bp CCTAAAAATGGATCTGTGGAGCTCCATGAGGGAACCTCAGAGATGCACAATGACAGGGCTTTCCCGGAGTaGAGGCCACAGAGGCCTCTG +
Preference number: 2 (lower is better)
Translates to: PKNGSVELHEGTSEMHNDRAFPE*RPQRPL
Trigger: CAGAGGCCTCTGTGGCCTCCACTCCGGGAAAGCCCT...GTCATTGTGCATCTCTGAGGTTCCCTCATGGAGCTCCACAGATCCATTTTTAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
3UTR-3UTR CCA 90 bp TGGGTCCTAGGTGTCACTTATCCTGGTGGACAGGGCAGAGGTGGTCAGATCGTTCCCAGAAGATTGGGCTaGAGAGGAGGTGTTGGTGTT +
Preference number: 2 (lower is better)
Translates to: WVLGVTYPGGQGRGGQIVPRRLG*RGGVGV
Trigger: AACACCAACACCTCCTCTCCAGCCCAATCTTCTGGG...AACGATCTGACCACCTCTGCCCTGTCCACCAGGATAAGTGACACCTAGGACCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
3UTR-3UTR CCA 90 bp GGTTACAGTGTCTTGAAAGTGTACCTGGGCACGGTGCGAAGGTGGTGGGAATGTGGAGCCTTCTCAGTCTaGCCTGGTTTATCTGGGACA +
Preference number: 2 (lower is better)
Translates to: GYSVLKVYLGTVRRWWECGAFSV*PGLSGT
Trigger: TGTCCCAGATAAACCAGGCCAGACTGAGAAGGCTCC...ACATTCCCACCACCTTCGCACCGTGCCCAGGTACACTTTCAAGACACTGTAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
3UTR-3UTR CCA 90 bp TCTGTGGAGCTCCATGAGGGAACCTCAGAGATGCACAATGACAGTTTAGCTAAAGGCCACAGAGGCCTCTaGGGAGCCTTCTCAGTCTGG +
Preference number: 2 (lower is better)
Translates to: SVELHEGTSEMHNDSLAKGHRGL*GAFSVW
Trigger: CCAGACTGAGAAGGCTCCCCAGAGGCCTCTGTGGCC...TTTAGCTAAACTGTCATTGTGCATCTCTGAGGTTCCCTCATGGAGCTCCACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
3UTR-3UTR CCA 90 bp CAAATCATCGGCATTTATTTCCTGGGTCCTAGGTGTCACTTATCCTGGTGGACAAGGGCTTTCCCGGAGTaGAGGCCACAGAGGCCTCTG +
Preference number: 2 (lower is better)
Translates to: QIIGIYFLGPRCHLSWWTRAFPE*RPQRPL
Trigger: CAGAGGCCTCTGTGGCCTCCACTCCGGGAAAGCCCT...TGTCCACCAGGATAAGTGACACCTAGGACCCAGGAAATAAATGCCGATGATTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
3UTR-3UTR CCA 90 bp TCTGTGGAGCTCCATGAGGGAACCTCAGAGATGCACAATGACAGTTTAGCTAAAAGGAGGTGTTGGTGTTaGGACAGGGTCCCTGCCCGG +
Preference number: 2 (lower is better)
Translates to: SVELHEGTSEMHNDSLAKRRCWC*DRVPAR
Trigger: CCGGGCAGGGACCCTGTCCCAACACCAACACCTCCT...TTTAGCTAAACTGTCATTGTGCATCTCTGAGGTTCCCTCATGGAGCTCCACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
3UTR-3UTR GCA 90 bp CCTAAAAATGGATCTGTGGAGCTCCATGAGGGAACCTCAGAGATGCACAATGACTGTACCTGGGCACGGTaGGAAGGTGGTGGGAATGTG +
Preference number: 2 (lower is better)
Translates to: PKNGSVELHEGTSEMHNDCTWAR*EGGGNV
Trigger: CACATTCCCACCACCTTCGCACCGTGCCCAGGTACA...GTCATTGTGCATCTCTGAGGTTCCCTCATGGAGCTCCACAGATCCATTTTTAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
3UTR-3UTR CCA 90 bp GGTTACAGTGTCTTGAAAGTGTACCTGGGCACGGTGCGAAGGTGGTGGGAATGTCTTCTCAGTCTGGCCTaGTTTATCTGGGACATGGAG +
Preference number: 2 (lower is better)
Translates to: GYSVLKVYLGTVRRWWECLLSLA*FIWDME
Trigger: CTCCATGTCCCAGATAAACCAGGCCAGACTGAGAAG...ACATTCCCACCACCTTCGCACCGTGCCCAGGTACACTTTCAAGACACTGTAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
3UTR-3UTR CCA 90 bp CCTAAAAATGGATCTGTGGAGCTCCATGAGGGAACCTCAGAGATGCACAATGACGGCACGGTGCGAAGGTaGTGGGAATGTGAAGCCTGT +
Preference number: 2 (lower is better)
Translates to: PKNGSVELHEGTSEMHNDGTVRR*WECEAC
Trigger: ACAGGCTTCACATTCCCACCACCTTCGCACCGTGCC...GTCATTGTGCATCTCTGAGGTTCCCTCATGGAGCTCCACAGATCCATTTTTAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
3UTR-3UTR GCA 90 bp TCTGTGGAGCTCCATGAGGGAACCTCAGAGATGCACAATGACAGTTTAGCTAAATGTACCTGGGCACGGTaGGAAGGTGGTGGGAATGTG +
Preference number: 2 (lower is better)
Translates to: SVELHEGTSEMHNDSLAKCTWAR*EGGGNV
Trigger: CACATTCCCACCACCTTCGCACCGTGCCCAGGTACA...TTTAGCTAAACTGTCATTGTGCATCTCTGAGGTTCCCTCATGGAGCTCCACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
3UTR-3UTR CCA 90 bp GCCAGCTCAATAAATAACATCTTGTGGTTACAGTGTCTTGAAAGTGTACCTGGGAGGGCTTTCCCGGAGTaGAGGCCACAGAGGCCTCTG +
Preference number: 2 (lower is better)
Translates to: ASSINNILWLQCLESVPGRAFPE*RPQRPL
Trigger: CAGAGGCCTCTGTGGCCTCCACTCCGGGAAAGCCCT...CCCAGGTACACTTTCAAGACACTGTAACCACAAGATGTTATTTATTGAGCTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
3UTR-3UTR CCA 90 bp TCTGTGGAGCTCCATGAGGGAACCTCAGAGATGCACAATGACAGTTTAGCTAAAGGCACGGTGCGAAGGTaGTGGGAATGTGAAGCCTGT +
Preference number: 2 (lower is better)
Translates to: SVELHEGTSEMHNDSLAKGTVRR*WECEAC
Trigger: ACAGGCTTCACATTCCCACCACCTTCGCACCGTGCC...TTTAGCTAAACTGTCATTGTGCATCTCTGAGGTTCCCTCATGGAGCTCCACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
3UTR-3UTR CCA 90 bp TCTGTGGAGCTCCATGAGGGAACCTCAGAGATGCACAATGACAGTTTAGCTAAAAGGAGCGTTCCTGTGTaGGCTGCTCACTGTAGGGCA +
Preference number: 2 (lower is better)
Translates to: SVELHEGTSEMHNDSLAKRSVPV*AAHCRA
Trigger: TGCCCTACAGTGAGCAGCCCACACAGGAACGCTCCT...TTTAGCTAAACTGTCATTGTGCATCTCTGAGGTTCCCTCATGGAGCTCCACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
3UTR-3UTR CCA 90 bp TGGGTCCTAGGTGTCACTTATCCTGGTGGACAGGGCAGAGGTGGTCAGATCGTTCTAAAAATGGATCTGTaGAGCTCCATGAGGGAACCT +
Preference number: 2 (lower is better)
Translates to: WVLGVTYPGGQGRGGQIVLKMDL*SSMREP
Trigger: AGGTTCCCTCATGGAGCTCCACAGATCCATTTTTAG...AACGATCTGACCACCTCTGCCCTGTCCACCAGGATAAGTGACACCTAGGACCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
3UTR-3UTR CCA 90 bp AGAAATCACAAGAACCAGGGACCATGGTGTCTCCTGAGTTCTGAAGTGTGTCTTCTTAAGGCTTGGAACTaGAATCCCCCTGGGCCAGGC +
Preference number: 2 (lower is better)
Translates to: RNHKNQGPWCLLSSEVCLLKAWN*NPPGPG
Trigger: GCCTGGCCCAGGGGGATTCCAGTTCCAAGCCTTAAG...AAGACACACTTCAGAACTCAGGAGACACCATGGTCCCTGGTTCTTGTGATTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372887.5
3UTR CAA 90 bp GGTGTCACTTATCCTGGTGGACAGGGCAGAGGTGGTCAGATCGTTTaGAGCCAAAATCCCTTCCCTAAAAATGGATCTGTGGAGCTCCAT +
Preference number: 2 (lower is better)
Translates to: GVTYPGGQGRGGQIV*SQNPFPKNGSVELH
Trigger: ATGGAGCTCCACAGATCCATTTTTAGGGAAGGGATTTTGGCTCAAAACGATCTGACCACCTCTGCCCTGTCCACCAGGATAAGTGACACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
3UTR-3UTR GCA 90 bp GCCAGCTCAATAAATAACATCTTGTGGTTACAGTGTCTTGAAAGTGTACCTGGGGCTCAGAGAAGAGGCTaGTGGGCCAGTGCCAGGGTT +
Preference number: 2 (lower is better)
Translates to: ASSINNILWLQCLESVPGAQRRG*WASARV
Trigger: AACCCTGGCACTGGCCCAGCAGCCTCTTCTCTGAGC...CCCAGGTACACTTTCAAGACACTGTAACCACAAGATGTTATTTATTGAGCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
3UTR-3UTR TCA 90 bp CAAATCATCGGCATTTATTTCCTGGGTCCTAGGTGTCACTTATCCTGGTGGACAGTGGTTACAGTGTCTTaGAAGTGTACCTGGGCACGG +
Preference number: 2 (lower is better)
Translates to: QIIGIYFLGPRCHLSWWTVVTVS*KCTWAR
Trigger: CCGTGCCCAGGTACACTTTCAAGACACTGTAACCAC...TGTCCACCAGGATAAGTGACACCTAGGACCCAGGAAATAAATGCCGATGATTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
3UTR-3UTR CCA 90 bp CAAATCATCGGCATTTATTTCCTGGGTCCTAGGTGTCACTTATCCTGGTGGACACCCAGAAGATTGGGCTaGAGAGGAGGTGTTGGTGTT +
Preference number: 2 (lower is better)
Translates to: QIIGIYFLGPRCHLSWWTPRRLG*RGGVGV
Trigger: AACACCAACACCTCCTCTCCAGCCCAATCTTCTGGG...TGTCCACCAGGATAAGTGACACCTAGGACCCAGGAAATAAATGCCGATGATTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
3UTR-3UTR CCA 90 bp TCTGTGGAGCTCCATGAGGGAACCTCAGAGATGCACAATGACAGTTTAGCTAAACCCAGAAGATTGGGCTaGAGAGGAGGTGTTGGTGTT +
Preference number: 2 (lower is better)
Translates to: SVELHEGTSEMHNDSLAKPRRLG*RGGVGV
Trigger: AACACCAACACCTCCTCTCCAGCCCAATCTTCTGGG...TTTAGCTAAACTGTCATTGTGCATCTCTGAGGTTCCCTCATGGAGCTCCACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
3UTR-3UTR CCA 90 bp CCCACCCATAGTTGGGAGAAATCACAAGAACCAGGGACCATGGTGTCTCCTGAGGAAGTGTGTCTTTGTTaGGTCTTAAGGCTTGGAACT +
Preference number: 2 (lower is better)
Translates to: PTHSWEKSQEPGTMVSPEEVCLC*VLRLGT
Trigger: AGTTCCAAGCCTTAAGACCCAACAAAGACACACTTC...CTCAGGAGACACCATGGTCCCTGGTTCTTGTGATTTCTCCCAACTATGGGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372887.5
3UTR CCA 72 bp CCTGCCCGGGCCGCTCGCGAGAGGAGCGTTCCTGTGTaGGCTGCTCACTGTAGGGCAGGCCCCGCCCAAGTC +
Preference number: 3 (lower is better)
Translates to: PARAARERSVPV*AAHCRAGPAQV
Trigger: GACTTGGGCGGGGCCTGCCCTACAGTGAGCAGCCCACACAGGAACGCTCCTCTCGCGAGCGGCCCGGGCAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
3UTR-3UTR CAA 90 bp GTTGGTGTTGGGACAGGGTCCCTGCCCGGGCCGCTCGCGAGAGGAGCGTTCCTGTGTGGTTACAGTGTCTaGAAAGTGTACCTGGGCACG +
Preference number: 3 (lower is better)
Translates to: VGVGTGSLPGPLARGAFLCGYSV*KVYLGT
Trigger: CGTGCCCAGGTACACTTTCAAGACACTGTAACCACA...CAGGAACGCTCCTCTCGCGAGCGGCCCGGGCAGGGACCCTGTCCCAACACCAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
3UTR-3UTR CAA 90 bp GTGTTGGTGTTGGGACAGGGTCCCTGCCCGGGCCGCTCGCGAGAGGAGCGTTCCTGTGGTTACAGTGTCTaGAAAGTGTACCTGGGCACG +
Preference number: 3 (lower is better)
Translates to: VLVLGQGPCPGRSREERSCGYSV*KVYLGT
Trigger: CGTGCCCAGGTACACTTTCAAGACACTGTAACCACA...GGAACGCTCCTCTCGCGAGCGGCCCGGGCAGGGACCCTGTCCCAACACCAACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
3UTR CCA 72 bp GTTTATCTGGGACATGGAGCTCAGAGAAGAGGCTGCTaGGCCAGTGCCAGGGTTCCCCCTCTGGGAGGGGAC +
Preference number: 3 (lower is better)
Translates to: VYLGHGAQRRGC*ASARVPPLGGD
Trigger: GTCCCCTCCCAGAGGGGGAACCCTGGCACTGGCCCAGCAGCCTCTTCTCTGAGCTCCATGTCCCAGATAAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
3UTR CCA 72 bp TGTCCAGGCCTACCAGGTGGGTCCTGTGAGAAGGAATaGAGAGGCTGGCCCTGGGTGAGCTTGTCTCCCACC +
Preference number: 3 (lower is better)
Translates to: CPGLPGGSCEKE*RGWPWVSLSPT
Trigger: GGTGGGAGACAAGCTCACCCAGGGCCAGCCTCTCCATTCCTTCTCACAGGACCCACCTGGTAGGCCTGGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372887.5
3UTR CCA 72 bp GGAGCCTTCTCAGTCTGGCCTGGTTTATCTGGGACATaGAGCTCAGAGAAGAGGCTGCTGGGCCAGTGCCAG +
Preference number: 3 (lower is better)
Translates to: GAFSVWPGLSGT*SSEKRLLGQCQ
Trigger: CTGGCACTGGCCCAGCAGCCTCTTCTCTGAGCTCCATGTCCCAGATAAACCAGGCCAGACTGAGAAGGCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
3UTR CCA 72 bp CCTCTGGGGAGCCTTCTCAGTCTGGCCTGGTTTATCTaGGACATGGAGCTCAGAGAAGAGGCTGCTGGGCCA +
Preference number: 3 (lower is better)
Translates to: PLGSLLSLAWFI*DMELREEAAGP
Trigger: TGGCCCAGCAGCCTCTTCTCTGAGCTCCATGTCCCAGATAAACCAGGCCAGACTGAGAAGGCTCCCCAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
3UTR CCA 72 bp GGCTGGCCCTGGGTGAGCTTGTCTCCCACCCATAGTTaGGAGAAATCACAAGAACCAGGGACCATGGTGTCT +
Preference number: 3 (lower is better)
Translates to: GWPWVSLSPTHS*EKSQEPGTMVS
Trigger: AGACACCATGGTCCCTGGTTCTTGTGATTTCTCCCAACTATGGGTGGGAGACAAGCTCACCCAGGGCCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372887.5
3UTR-3UTR CAA 90 bp CAAATCATCGGCATTTATTTCCTGGGTCCTAGGTGTCACTTATCCTGGTGGACAGAGGAGGTGTTGGTGTaGGGACAGGGTCCCTGCCCG +
Preference number: 3 (lower is better)
Translates to: QIIGIYFLGPRCHLSWWTEEVLV*GQGPCP
Trigger: CGGGCAGGGACCCTGTCCCAACACCAACACCTCCTC...TGTCCACCAGGATAAGTGACACCTAGGACCCAGGAAATAAATGCCGATGATTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
3UTR CCA 72 bp CCATGGTGTCTCCTGAGTTCTGAAGTGTGTCTTTGTTaGGTCTTAAGGCTTGGAACTGGAATCCCCCTGGGC +
Preference number: 3 (lower is better)
Translates to: PWCLLSSEVCLC*VLRLGTGIPLG
Trigger: GCCCAGGGGGATTCCAGTTCCAAGCCTTAAGACCCAACAAAGACACACTTCAGAACTCAGGAGACACCATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372887.5
3UTR CCA 72 bp GGCATTTATTTCCTGGGTCCTAGGTGTCACTTATCCTaGTGGACAGGGCAGAGGTGGTCAGATCGTTTTGAG +
Preference number: 3 (lower is better)
Translates to: GIYFLGPRCHLS*WTGQRWSDRFE
Trigger: CTCAAAACGATCTGACCACCTCTGCCCTGTCCACCAGGATAAGTGACACCTAGGACCCAGGAAATAAATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
3UTR CCA 72 bp CCAAGTCCCGGCGCCAGCTCAATAAATAACATCTTGTaGTTACAGTGTCTTGAAAGTGTACCTGGGCACGGT +
Preference number: 3 (lower is better)
Translates to: PSPGASSINNIL*LQCLESVPGHG
Trigger: ACCGTGCCCAGGTACACTTTCAAGACACTGTAACCACAAGATGTTATTTATTGAGCTGGCGCCGGGACTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
3UTR TCA 72 bp TCACAAGAACCAGGGACCATGGTGTCTCCTGAGTTCTaGAGTGTGTCTTTGTTGGGTCTTAAGGCTTGGAAC +
Preference number: 3 (lower is better)
Translates to: SQEPGTMVSPEF*SVSLLGLKAWN
Trigger: GTTCCAAGCCTTAAGACCCAACAAAGACACACTTCAGAACTCAGGAGACACCATGGTCCCTGGTTCTTGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372887.5
CDS-3UTR GCA 90 bp AGCGTTCCTGTGTGGGCTGCTCACTGTAGGGCAGGCCCCGCCCAAGTCCCGGCGTTGGGACAGGGTCCCTaGCCGGGCCGCTCGCGAGAG +
Preference number: 4 (lower is better)
Translates to: SVPVWAAHCRAGPAQVPALGQGP*PGRSRE
Trigger: CTCTCGCGAGCGGCCCGGGCAGGGACCCTGTCCCAA...CGCCGGGACTTGGGCGGGGCCTGCCCTACAGTGAGCAGCCCACACAGGAACGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR GCA 90 bp GTGTTGGTGTTGGGACAGGGTCCCTGCCCGGGCCGCTCGCGAGAGGAGCGTTCCTTGGGACAGGGTCCCTaGCCGGGCCGCTCGCGAGAG +
Preference number: 4 (lower is better)
Translates to: VLVLGQGPCPGRSREERSLGQGP*PGRSRE
Trigger: CTCTCGCGAGCGGCCCGGGCAGGGACCCTGTCCCAA...GGAACGCTCCTCTCGCGAGCGGCCCGGGCAGGGACCCTGTCCCAACACCAACAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR GCA 90 bp TGTTGGGACAGGGTCCCTGCCCGGGCCGCTCGCGAGAGGAGCGTTCCTGTGTGGTTGGGACAGGGTCCCTaGCCGGGCCGCTCGCGAGAG +
Preference number: 4 (lower is better)
Translates to: CWDRVPARAARERSVPVWLGQGP*PGRSRE
Trigger: CTCTCGCGAGCGGCCCGGGCAGGGACCCTGTCCCAA...CCACACAGGAACGCTCCTCTCGCGAGCGGCCCGGGCAGGGACCCTGTCCCAACA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR GCA 90 bp TGTTGGGACAGGGTCCCTGCCCGGGCCGCTCGCGAGAGGAGCGTTCCTGTGTGGCTTGGCGACCTGGGCTaGCGAACTCCCGCGGCACTC +
Preference number: 4 (lower is better)
Translates to: CWDRVPARAARERSVPVWLGDLG*RTPAAL
Trigger: GAGTGCCGCGGGAGTTCGGCAGCCCAGGTCGCCAAG...CCACACAGGAACGCTCCTCTCGCGAGCGGCCCGGGCAGGGACCCTGTCCCAACA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp AGCGTTCCTGTGTGGGCTGCTCACTGTAGGGCAGGCCCCGCCCAAGTCCCGGCGCGGAGCCCGTTGCCTTaGCGACCTGGGCTGCCGAAC +
Preference number: 4 (lower is better)
Translates to: SVPVWAAHCRAGPAQVPARSPLP*RPGLPN
Trigger: GTTCGGCAGCCCAGGTCGCCAAGGCAACGGGCTCCG...CGCCGGGACTTGGGCGGGGCCTGCCCTACAGTGAGCAGCCCACACAGGAACGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR GCA 90 bp TCCCTGCCCGGGCCGCTCGCGAGAGGAGCGTTCCTGTGTGGGCTGCTCACTGTAAGGCTGCTGGGCCAGTaGCAGGGTTCCCCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: SLPGPLARGAFLCGLLTVRLLGQ*QGSPSG
Trigger: CCCAGAGGGGGAACCCTGGCACTGGCCCAGCAGCCT...TACAGTGAGCAGCCCACACAGGAACGCTCCTCTCGCGAGCGGCCCGGGCAGGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp GTTGGTGTTGGGACAGGGTCCCTGCCCGGGCCGCTCGCGAGAGGAGCGTTCCTGCGCTCCTCAGGCCTGTaGGGACAGAAGGCAAGGGGG +
Preference number: 4 (lower is better)
Translates to: VGVGTGSLPGPLARGAFLRSSGL*GQKARG
Trigger: CCCCCTTGCCTTCTGTCCCCACAGGCCTGAGGAGCG...CAGGAACGCTCCTCTCGCGAGCGGCCCGGGCAGGGACCCTGTCCCAACACCAAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349959.3
CDS-3UTR CCA 90 bp GTGTTGGTGTTGGGACAGGGTCCCTGCCCGGGCCGCTCGCGAGAGGAGCGTTCCCTACGGCGGCTCGGATaGGACCAGGACGGTTCGCGT +
Preference number: 4 (lower is better)
Translates to: VLVLGQGPCPGRSREERSLRRLG*DQDGSR
Trigger: ACGCGAACCGTCCTGGTCCCATCCGAGCCGCCGTAG...GGAACGCTCCTCTCGCGAGCGGCCCGGGCAGGGACCCTGTCCCAACACCAACAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp GTTGGTGTTGGGACAGGGTCCCTGCCCGGGCCGCTCGCGAGAGGAGCGTTCCTGCTACGGCGGCTCGGATaGGACCAGGACGGTTCGCGT +
Preference number: 4 (lower is better)
Translates to: VGVGTGSLPGPLARGAFLLRRLG*DQDGSR
Trigger: ACGCGAACCGTCCTGGTCCCATCCGAGCCGCCGTAG...CAGGAACGCTCCTCTCGCGAGCGGCCCGGGCAGGGACCCTGTCCCAACACCAAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR GCA 90 bp TGTTGGGACAGGGTCCCTGCCCGGGCCGCTCGCGAGAGGAGCGTTCCTGTGTGGCTCCACCTGTCCTTCTaGCCCCTCGAGTGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: CWDRVPARAARERSVPVWLHLSF*PLECQL
Trigger: GAGCTGGCACTCGAGGGGGCAGAAGGACAGGTGGAG...CCACACAGGAACGCTCCTCTCGCGAGCGGCCCGGGCAGGGACCCTGTCCCAACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR GCA 90 bp GTGTTGGTGTTGGGACAGGGTCCCTGCCCGGGCCGCTCGCGAGAGGAGCGTTCCCTCCACCTGTCCTTCTaGCCCCTCGAGTGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: VLVLGQGPCPGRSREERSLHLSF*PLECQL
Trigger: GAGCTGGCACTCGAGGGGGCAGAAGGACAGGTGGAG...GGAACGCTCCTCTCGCGAGCGGCCCGGGCAGGGACCCTGTCCCAACACCAACAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR GCA 90 bp GTTGGTGTTGGGACAGGGTCCCTGCCCGGGCCGCTCGCGAGAGGAGCGTTCCTGAGGTGGTCCCATCGCTaGTCTGGGGCTGGTTGCCAG +
Preference number: 4 (lower is better)
Translates to: VGVGTGSLPGPLARGAFLRWSHR*SGAGCQ
Trigger: CTGGCAACCAGCCCCAGAGCAGCGATGGGACCACCT...CAGGAACGCTCCTCTCGCGAGCGGCCCGGGCAGGGACCCTGTCCCAACACCAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp GTGTTGGTGTTGGGACAGGGTCCCTGCCCGGGCCGCTCGCGAGAGGAGCGTTCCCCAGGGTTCCCCCTCTaGGAGGGGACAGAAGGTCTC +
Preference number: 4 (lower is better)
Translates to: VLVLGQGPCPGRSREERSPGFPL*EGTEGL
Trigger: GAGACCTTCTGTCCCCTCCCAGAGGGGGAACCCTGG...GGAACGCTCCTCTCGCGAGCGGCCCGGGCAGGGACCCTGTCCCAACACCAACAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp GTGTTGGTGTTGGGACAGGGTCCCTGCCCGGGCCGCTCGCGAGAGGAGCGTTCCAGGGCTTTCCCGGAGTaGAGGCCACAGAGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: VLVLGQGPCPGRSREERSRAFPE*RPQRPL
Trigger: CAGAGGCCTCTGTGGCCTCCACTCCGGGAAAGCCCT...GGAACGCTCCTCTCGCGAGCGGCCCGGGCAGGGACCCTGTCCCAACACCAACAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp TGTTGGGACAGGGTCCCTGCCCGGGCCGCTCGCGAGAGGAGCGTTCCTGTGTGGAGGGCTTTCCCGGAGTaGAGGCCACAGAGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: CWDRVPARAARERSVPVWRAFPE*RPQRPL
Trigger: CAGAGGCCTCTGTGGCCTCCACTCCGGGAAAGCCCT...CCACACAGGAACGCTCCTCTCGCGAGCGGCCCGGGCAGGGACCCTGTCCCAACA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp AGCGTTCCTGTGTGGGCTGCTCACTGTAGGGCAGGCCCCGCCCAAGTCCCGGCGAGGAGGTGTTGGTGTTaGGACAGGGTCCCTGCCCGG +
Preference number: 4 (lower is better)
Translates to: SVPVWAAHCRAGPAQVPARRCWC*DRVPAR
Trigger: CCGGGCAGGGACCCTGTCCCAACACCAACACCTCCT...CGCCGGGACTTGGGCGGGGCCTGCCCTACAGTGAGCAGCCCACACAGGAACGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR TCA 90 bp AGCGTTCCTGTGTGGGCTGCTCACTGTAGGGCAGGCCCCGCCCAAGTCCCGGCGCACGCTCACAGCCTCTaGGTCTCCCTGGATGTCAGG +
Preference number: 4 (lower is better)
Translates to: SVPVWAAHCRAGPAQVPAHAHSL*VSLDVR
Trigger: CCTGACATCCAGGGAGACTCAGAGGCTGTGAGCGTG...CGCCGGGACTTGGGCGGGGCCTGCCCTACAGTGAGCAGCCCACACAGGAACGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR GCA 90 bp TGTTGGGACAGGGTCCCTGCCCGGGCCGCTCGCGAGAGGAGCGTTCCTGTGTGGGCTCAGAGAAGAGGCTaGTGGGCCAGTGCCAGGGTT +
Preference number: 4 (lower is better)
Translates to: CWDRVPARAARERSVPVWAQRRG*WASARV
Trigger: AACCCTGGCACTGGCCCAGCAGCCTCTTCTCTGAGC...CCACACAGGAACGCTCCTCTCGCGAGCGGCCCGGGCAGGGACCCTGTCCCAACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR GCA 90 bp AGCGTTCCTGTGTGGGCTGCTCACTGTAGGGCAGGCCCCGCCCAAGTCCCGGCGGTCCAGCTGCATCACTaGTTGGTGGCCGGGCATGCT +
Preference number: 4 (lower is better)
Translates to: SVPVWAAHCRAGPAQVPAVQLHH*LVAGHA
Trigger: AGCATGCCCGGCCACCAAGCAGTGATGCAGCTGGAC...CGCCGGGACTTGGGCGGGGCCTGCCCTACAGTGAGCAGCCCACACAGGAACGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372889.5
CDS-3UTR GCA 90 bp GTGTTGGTGTTGGGACAGGGTCCCTGCCCGGGCCGCTCGCGAGAGGAGCGTTCCTGTACCTGGGCACGGTaGGAAGGTGGTGGGAATGTG +
Preference number: 4 (lower is better)
Translates to: VLVLGQGPCPGRSREERSCTWAR*EGGGNV
Trigger: CACATTCCCACCACCTTCGCACCGTGCCCAGGTACA...GGAACGCTCCTCTCGCGAGCGGCCCGGGCAGGGACCCTGTCCCAACACCAACAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp GTGTTGGTGTTGGGACAGGGTCCCTGCCCGGGCCGCTCGCGAGAGGAGCGTTCCTCGCTGCTCTGGGGCTaGTTGCCAGCTTCCTTGTCT +
Preference number: 4 (lower is better)
Translates to: VLVLGQGPCPGRSREERSSLLWG*LPASLS
Trigger: AGACAAGGAAGCTGGCAACCAGCCCCAGAGCAGCGA...GGAACGCTCCTCTCGCGAGCGGCCCGGGCAGGGACCCTGTCCCAACACCAACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp GTTGGTGTTGGGACAGGGTCCCTGCCCGGGCCGCTCGCGAGAGGAGCGTTCCTGTCGCTGCTCTGGGGCTaGTTGCCAGCTTCCTTGTCT +
Preference number: 4 (lower is better)
Translates to: VGVGTGSLPGPLARGAFLSLLWG*LPASLS
Trigger: AGACAAGGAAGCTGGCAACCAGCCCCAGAGCAGCGA...CAGGAACGCTCCTCTCGCGAGCGGCCCGGGCAGGGACCCTGTCCCAACACCAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp AGCGTTCCTGTGTGGGCTGCTCACTGTAGGGCAGGCCCCGCCCAAGTCCCGGCGGGCACGGTGCGAAGGTaGTGGGAATGTGAAGCCTGT +
Preference number: 4 (lower is better)
Translates to: SVPVWAAHCRAGPAQVPAGTVRR*WECEAC
Trigger: ACAGGCTTCACATTCCCACCACCTTCGCACCGTGCC...CGCCGGGACTTGGGCGGGGCCTGCCCTACAGTGAGCAGCCCACACAGGAACGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp TGTTGGGACAGGGTCCCTGCCCGGGCCGCTCGCGAGAGGAGCGTTCCTGTGTGGGGCACGGTGCGAAGGTaGTGGGAATGTGAAGCCTGT +
Preference number: 4 (lower is better)
Translates to: CWDRVPARAARERSVPVWGTVRR*WECEAC
Trigger: ACAGGCTTCACATTCCCACCACCTTCGCACCGTGCC...CCACACAGGAACGCTCCTCTCGCGAGCGGCCCGGGCAGGGACCCTGTCCCAACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp GTGTTGGTGTTGGGACAGGGTCCCTGCCCGGGCCGCTCGCGAGAGGAGCGTTCCAGGAGCGTTCCTGTGTaGGCTGCTCACTGTAGGGCA +
Preference number: 4 (lower is better)
Translates to: VLVLGQGPCPGRSREERSRSVPV*AAHCRA
Trigger: TGCCCTACAGTGAGCAGCCCACACAGGAACGCTCCT...GGAACGCTCCTCTCGCGAGCGGCCCGGGCAGGGACCCTGTCCCAACACCAACAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR TCA 90 bp TGTTGGGACAGGGTCCCTGCCCGGGCCGCTCGCGAGAGGAGCGTTCCTGTGTGGTCCGGTCACAGGAGATaGAGTCCGAGTAGGAGGACT +
Preference number: 4 (lower is better)
Translates to: CWDRVPARAARERSVPVWSGHRR*SPSRRT
Trigger: AGTCCTCCTACTCGGACTTCATCTCCTGTGACCGGA...CCACACAGGAACGCTCCTCTCGCGAGCGGCCCGGGCAGGGACCCTGTCCCAACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR GCA 90 bp GCCTCTGGGGAGCCTTCTCAGTCTGGCCTGGTTTATCTGGGACATGGAGCTCAGTTGGGACAGGGTCCCTaGCCGGGCCGCTCGCGAGAG +
Preference number: 4 (lower is better)
Translates to: ASGEPSQSGLVYLGHGAQLGQGP*PGRSRE
Trigger: CTCTCGCGAGCGGCCCGGGCAGGGACCCTGTCCCAA...CTGAGCTCCATGTCCCAGATAAACCAGGCCAGACTGAGAAGGCTCCCCAGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR GCA 90 bp GGTTTATCTGGGACATGGAGCTCAGAGAAGAGGCTGCTGGGCCAGTGCCAGGGTTTGGGACAGGGTCCCTaGCCGGGCCGCTCGCGAGAG +
Preference number: 4 (lower is better)
Translates to: GLSGTWSSEKRLLGQCQGLGQGP*PGRSRE
Trigger: CTCTCGCGAGCGGCCCGGGCAGGGACCCTGTCCCAA...ACCCTGGCACTGGCCCAGCAGCCTCTTCTCTGAGCTCCATGTCCCAGATAAACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp AGCGTTCCTGTGTGGGCTGCTCACTGTAGGGCAGGCCCCGCCCAAGTCCCGGCGAGATTCAAGACGAGGTaGTCCCATCGCTGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: SVPVWAAHCRAGPAQVPARFKTR*SHRCSG
Trigger: CCCAGAGCAGCGATGGGACCACCTCGTCTTGAATCT...CGCCGGGACTTGGGCGGGGCCTGCCCTACAGTGAGCAGCCCACACAGGAACGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp GTTGGTGTTGGGACAGGGTCCCTGCCCGGGCCGCTCGCGAGAGGAGCGTTCCTGAGATTCAAGACGAGGTaGTCCCATCGCTGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: VGVGTGSLPGPLARGAFLRFKTR*SHRCSG
Trigger: CCCAGAGCAGCGATGGGACCACCTCGTCTTGAATCT...CAGGAACGCTCCTCTCGCGAGCGGCCCGGGCAGGGACCCTGTCCCAACACCAAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp GTGTTGGTGTTGGGACAGGGTCCCTGCCCGGGCCGCTCGCGAGAGGAGCGTTCCAGGGACAAGCAGGTCTaGACCCAGAAGATTGGGCTG +
Preference number: 4 (lower is better)
Translates to: VLVLGQGPCPGRSREERSRDKQV*TQKIGL
Trigger: CAGCCCAATCTTCTGGGTCCAGACCTGCTTGTCCCT...GGAACGCTCCTCTCGCGAGCGGCCCGGGCAGGGACCCTGTCCCAACACCAACAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp TGTTGGGACAGGGTCCCTGCCCGGGCCGCTCGCGAGAGGAGCGTTCCTGTGTGGAGGGACAAGCAGGTCTaGACCCAGAAGATTGGGCTG +
Preference number: 4 (lower is better)
Translates to: CWDRVPARAARERSVPVWRDKQV*TQKIGL
Trigger: CAGCCCAATCTTCTGGGTCCAGACCTGCTTGTCCCT...CCACACAGGAACGCTCCTCTCGCGAGCGGCCCGGGCAGGGACCCTGTCCCAACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp TGTTGGGACAGGGTCCCTGCCCGGGCCGCTCGCGAGAGGAGCGTTCCTGTGTGGAGGTGTCACTTATCCTaGTGGACAGGGCAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: CWDRVPARAARERSVPVWRCHLS*WTGQRW
Trigger: CCACCTCTGCCCTGTCCACCAGGATAAGTGACACCT...CCACACAGGAACGCTCCTCTCGCGAGCGGCCCGGGCAGGGACCCTGTCCCAACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp AGCGTTCCTGTGTGGGCTGCTCACTGTAGGGCAGGCCCCGCCCAAGTCCCGGCGAGGTGTCACTTATCCTaGTGGACAGGGCAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: SVPVWAAHCRAGPAQVPARCHLS*WTGQRW
Trigger: CCACCTCTGCCCTGTCCACCAGGATAAGTGACACCT...CGCCGGGACTTGGGCGGGGCCTGCCCTACAGTGAGCAGCCCACACAGGAACGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR TCA 90 bp AGCGTTCCTGTGTGGGCTGCTCACTGTAGGGCAGGCCCCGCCCAAGTCCCGGCGATCTGTGGAGCTCCATaGGGGAACCTCAGAGATGCA +
Preference number: 4 (lower is better)
Translates to: SVPVWAAHCRAGPAQVPAICGAP*GNLRDA
Trigger: TGCATCTCTGAGGTTCCCTCATGGAGCTCCACAGAT...CGCCGGGACTTGGGCGGGGCCTGCCCTACAGTGAGCAGCCCACACAGGAACGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR TCA 90 bp GTGTTGGTGTTGGGACAGGGTCCCTGCCCGGGCCGCTCGCGAGAGGAGCGTTCCATCTGTGGAGCTCCATaGGGGAACCTCAGAGATGCA +
Preference number: 4 (lower is better)
Translates to: VLVLGQGPCPGRSREERSICGAP*GNLRDA
Trigger: TGCATCTCTGAGGTTCCCTCATGGAGCTCCACAGAT...GGAACGCTCCTCTCGCGAGCGGCCCGGGCAGGGACCCTGTCCCAACACCAACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR GCA 90 bp AGAGGCCTCTGGGGAGCCTTCTCAGTCTGGCCTGGTTTATCTGGGACATGGAGCAGGCTGCTGGGCCAGTaGCAGGGTTCCCCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: RGLWGAFSVWPGLSGTWSRLLGQ*QGSPSG
Trigger: CCCAGAGGGGGAACCCTGGCACTGGCCCAGCAGCCT...GCTCCATGTCCCAGATAAACCAGGCCAGACTGAGAAGGCTCCCCAGAGGCCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR GCA 90 bp GCCTGGTTTATCTGGGACATGGAGCTCAGAGAAGAGGCTGCTGGGCCAGTGCCAAGGCTGCTGGGCCAGTaGCAGGGTTCCCCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: AWFIWDMELREEAAGPVPRLLGQ*QGSPSG
Trigger: CCCAGAGGGGGAACCCTGGCACTGGCCCAGCAGCCT...TGGCACTGGCCCAGCAGCCTCTTCTCTGAGCTCCATGTCCCAGATAAACCAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR GCA 90 bp TCTGGGACATGGAGCTCAGAGAAGAGGCTGCTGGGCCAGTGCCAGGGTTCCCCCGCTCAGAGAAGAGGCTaGTGGGCCAGTGCCAGGGTT +
Preference number: 4 (lower is better)
Translates to: SGTWSSEKRLLGQCQGSPAQRRG*WASARV
Trigger: AACCCTGGCACTGGCCCAGCAGCCTCTTCTCTGAGC...GGGGGAACCCTGGCACTGGCCCAGCAGCCTCTTCTCTGAGCTCCATGTCCCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR GCA 90 bp GTGTTGGTGTTGGGACAGGGTCCCTGCCCGGGCCGCTCGCGAGAGGAGCGTTCCAGTCCAGACCTGTGGTaGGGGCAGGATTCTCACTTT +
Preference number: 4 (lower is better)
Translates to: VLVLGQGPCPGRSREERSSPDLW*GQDSHF
Trigger: AAAGTGAGAATCCTGCCCGCACCACAGGTCTGGACT...GGAACGCTCCTCTCGCGAGCGGCCCGGGCAGGGACCCTGTCCCAACACCAACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
CDS-3UTR GCA 90 bp GTTGGTGTTGGGACAGGGTCCCTGCCCGGGCCGCTCGCGAGAGGAGCGTTCCTGACCCATGGAAGTCTGTaGTTCCATGGAGGTCTCTGG +
Preference number: 4 (lower is better)
Translates to: VGVGTGSLPGPLARGAFLTHGSL*FHGGLW
Trigger: CCAGAGACCTCCATGGAAGCACAGACTTCCATGGGT...CAGGAACGCTCCTCTCGCGAGCGGCCCGGGCAGGGACCCTGTCCCAACACCAAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372889.5
CDS-3UTR GCA 90 bp TGGCCTGGTTTATCTGGGACATGGAGCTCAGAGAAGAGGCTGCTGGGCCAGTGCCTTGGCGACCTGGGCTaGCGAACTCCCGCGGCACTC +
Preference number: 4 (lower is better)
Translates to: WPGLSGTWSSEKRLLGQCLGDLG*RTPAAL
Trigger: GAGTGCCGCGGGAGTTCGGCAGCCCAGGTCGCCAAG...GCACTGGCCCAGCAGCCTCTTCTCTGAGCTCCATGTCCCAGATAAACCAGGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp TGTTGGGACAGGGTCCCTGCCCGGGCCGCTCGCGAGAGGAGCGTTCCTGTGTGGGGAGCCTTCTCAGTCTaGCCTGGTTTATCTGGGACA +
Preference number: 4 (lower is better)
Translates to: CWDRVPARAARERSVPVWGAFSV*PGLSGT
Trigger: TGTCCCAGATAAACCAGGCCAGACTGAGAAGGCTCC...CCACACAGGAACGCTCCTCTCGCGAGCGGCCCGGGCAGGGACCCTGTCCCAACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp GTGTTGGTGTTGGGACAGGGTCCCTGCCCGGGCCGCTCGCGAGAGGAGCGTTCCCCCAGAAGATTGGGCTaGAGAGGAGGTGTTGGTGTT +
Preference number: 4 (lower is better)
Translates to: VLVLGQGPCPGRSREERSPRRLG*RGGVGV
Trigger: AACACCAACACCTCCTCTCCAGCCCAATCTTCTGGG...GGAACGCTCCTCTCGCGAGCGGCCCGGGCAGGGACCCTGTCCCAACACCAACAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp AGCGTTCCTGTGTGGGCTGCTCACTGTAGGGCAGGCCCCGCCCAAGTCCCGGCGTGGACAGGGCAGAGGTaGTCAGATCGTTTTGAGCCA +
Preference number: 4 (lower is better)
Translates to: SVPVWAAHCRAGPAQVPAWTGQR*SDRFEP
Trigger: TGGCTCAAAACGATCTGACCACCTCTGCCCTGTCCA...CGCCGGGACTTGGGCGGGGCCTGCCCTACAGTGAGCAGCCCACACAGGAACGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp TGGCCTGGTTTATCTGGGACATGGAGCTCAGAGAAGAGGCTGCTGGGCCAGTGCGTTGCCTTGGCGACCTaGGCTGCCGAACTCCCGCGG +
Preference number: 4 (lower is better)
Translates to: WPGLSGTWSSEKRLLGQCVALAT*AAELPR
Trigger: CCGCGGGAGTTCGGCAGCCCAGGTCGCCAAGGCAAC...GCACTGGCCCAGCAGCCTCTTCTCTGAGCTCCATGTCCCAGATAAACCAGGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR GCA 90 bp TGGGTCCTAGGTGTCACTTATCCTGGTGGACAGGGCAGAGGTGGTCAGATCGTTTTGGGACAGGGTCCCTaGCCGGGCCGCTCGCGAGAG +
Preference number: 4 (lower is better)
Translates to: WVLGVTYPGGQGRGGQIVLGQGP*PGRSRE
Trigger: CTCTCGCGAGCGGCCCGGGCAGGGACCCTGTCCCAA...AACGATCTGACCACCTCTGCCCTGTCCACCAGGATAAGTGACACCTAGGACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR GCA 90 bp GTTGGTGTTGGGACAGGGTCCCTGCCCGGGCCGCTCGCGAGAGGAGCGTTCCTGCCTCCCCAGGCCTCCTaGTGTGTCTGTATTATCAAA +
Preference number: 4 (lower is better)
Translates to: VGVGTGSLPGPLARGAFLPPQAS*CVCIIK
Trigger: TTTGATAATACAGACACAGCAGGAGGCCTGGGGAGG...CAGGAACGCTCCTCTCGCGAGCGGCCCGGGCAGGGACCCTGTCCCAACACCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372889.5
CDS-3UTR GCA 90 bp CTCAGTCTGGCCTGGTTTATCTGGGACATGGAGCTCAGAGAAGAGGCTGCTGGGCTTGGCGACCTGGGCTaGCGAACTCCCGCGGCACTC +
Preference number: 4 (lower is better)
Translates to: LSLAWFIWDMELREEAAGLGDLG*RTPAAL
Trigger: GAGTGCCGCGGGAGTTCGGCAGCCCAGGTCGCCAAG...CCCAGCAGCCTCTTCTCTGAGCTCCATGTCCCAGATAAACCAGGCCAGACTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp TGTTGGGACAGGGTCCCTGCCCGGGCCGCTCGCGAGAGGAGCGTTCCTGTGTGGCTTCTCAGTCTGGCCTaGTTTATCTGGGACATGGAG +
Preference number: 4 (lower is better)
Translates to: CWDRVPARAARERSVPVWLLSLA*FIWDME
Trigger: CTCCATGTCCCAGATAAACCAGGCCAGACTGAGAAG...CCACACAGGAACGCTCCTCTCGCGAGCGGCCCGGGCAGGGACCCTGTCCCAACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp TCTGGGACATGGAGCTCAGAGAAGAGGCTGCTGGGCCAGTGCCAGGGTTCCCCCACGGTGCGAAGGTGGTaGGAATGTGAAGCCTGTGGG +
Preference number: 4 (lower is better)
Translates to: SGTWSSEKRLLGQCQGSPTVRRW*ECEACG
Trigger: CCCACAGGCTTCACATTCCCACCACCTTCGCACCGT...GGGGGAACCCTGGCACTGGCCCAGCAGCCTCTTCTCTGAGCTCCATGTCCCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp TCCCTGCCCGGGCCGCTCGCGAGAGGAGCGTTCCTGTGTGGGCTGCTCACTGTATGGACAGGGCAGAGGTaGTCAGATCGTTTTGAGCCA +
Preference number: 4 (lower is better)
Translates to: SLPGPLARGAFLCGLLTVWTGQR*SDRFEP
Trigger: TGGCTCAAAACGATCTGACCACCTCTGCCCTGTCCA...TACAGTGAGCAGCCCACACAGGAACGCTCCTCTCGCGAGCGGCCCGGGCAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp GGTTTATCTGGGACATGGAGCTCAGAGAAGAGGCTGCTGGGCCAGTGCCAGGGTCTACGGCGGCTCGGATaGGACCAGGACGGTTCGCGT +
Preference number: 4 (lower is better)
Translates to: GLSGTWSSEKRLLGQCQGLRRLG*DQDGSR
Trigger: ACGCGAACCGTCCTGGTCCCATCCGAGCCGCCGTAG...ACCCTGGCACTGGCCCAGCAGCCTCTTCTCTGAGCTCCATGTCCCAGATAAACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp CTCAGTCTGGCCTGGTTTATCTGGGACATGGAGCTCAGAGAAGAGGCTGCTGGGGTTGCCTTGGCGACCTaGGCTGCCGAACTCCCGCGG +
Preference number: 4 (lower is better)
Translates to: LSLAWFIWDMELREEAAGVALAT*AAELPR
Trigger: CCGCGGGAGTTCGGCAGCCCAGGTCGCCAAGGCAAC...CCCAGCAGCCTCTTCTCTGAGCTCCATGTCCCAGATAAACCAGGCCAGACTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR TCA 90 bp TCTGGGACATGGAGCTCAGAGAAGAGGCTGCTGGGCCAGTGCCAGGGTTCCCCCTCCGGTCACAGGAGATaGAGTCCGAGTAGGAGGACT +
Preference number: 4 (lower is better)
Translates to: SGTWSSEKRLLGQCQGSPSGHRR*SPSRRT
Trigger: AGTCCTCCTACTCGGACTTCATCTCCTGTGACCGGA...GGGGGAACCCTGGCACTGGCCCAGCAGCCTCTTCTCTGAGCTCCATGTCCCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR TCA 90 bp TGTTGGGACAGGGTCCCTGCCCGGGCCGCTCGCGAGAGGAGCGTTCCTGTGTGGGTGGTCAGATCGTTTTaGGCCAAAATCCCTTCCCTA +
Preference number: 4 (lower is better)
Translates to: CWDRVPARAARERSVPVWVVRSF*AKIPSL
Trigger: TAGGGAAGGGATTTTGGCTCAAAACGATCTGACCAC...CCACACAGGAACGCTCCTCTCGCGAGCGGCCCGGGCAGGGACCCTGTCCCAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR TCA 90 bp GTTGGTGTTGGGACAGGGTCCCTGCCCGGGCCGCTCGCGAGAGGAGCGTTCCTGGTGGTCAGATCGTTTTaGGCCAAAATCCCTTCCCTA +
Preference number: 4 (lower is better)
Translates to: VGVGTGSLPGPLARGAFLVVRSF*AKIPSL
Trigger: TAGGGAAGGGATTTTGGCTCAAAACGATCTGACCAC...CAGGAACGCTCCTCTCGCGAGCGGCCCGGGCAGGGACCCTGTCCCAACACCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR GCA 90 bp GGTTTATCTGGGACATGGAGCTCAGAGAAGAGGCTGCTGGGCCAGTGCCAGGGTTTCTGCCCCCTCGAGTaGCAGCTCGCCCATGTCTCC +
Preference number: 4 (lower is better)
Translates to: GLSGTWSSEKRLLGQCQGFCPLE*QLAHVS
Trigger: GGAGACATGGGCGAGCTGGCACTCGAGGGGGCAGAA...ACCCTGGCACTGGCCCAGCAGCCTCTTCTCTGAGCTCCATGTCCCAGATAAACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR GCA 90 bp GCCTGGTTTATCTGGGACATGGAGCTCAGAGAAGAGGCTGCTGGGCCAGTGCCATTCTGCCCCCTCGAGTaGCAGCTCGCCCATGTCTCC +
Preference number: 4 (lower is better)
Translates to: AWFIWDMELREEAAGPVPFCPLE*QLAHVS
Trigger: GGAGACATGGGCGAGCTGGCACTCGAGGGGGCAGAA...TGGCACTGGCCCAGCAGCCTCTTCTCTGAGCTCCATGTCCCAGATAAACCAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR GCA 90 bp GGTTTATCTGGGACATGGAGCTCAGAGAAGAGGCTGCTGGGCCAGTGCCAGGGTAGGTGGTCCCATCGCTaGTCTGGGGCTGGTTGCCAG +
Preference number: 4 (lower is better)
Translates to: GLSGTWSSEKRLLGQCQGRWSHR*SGAGCQ
Trigger: CTGGCAACCAGCCCCAGAGCAGCGATGGGACCACCT...ACCCTGGCACTGGCCCAGCAGCCTCTTCTCTGAGCTCCATGTCCCAGATAAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp GCCTGGTTTATCTGGGACATGGAGCTCAGAGAAGAGGCTGCTGGGCCAGTGCCAGCCAGCTTCCTTGTCTaGGGCGCTTCCCTCCACCTG +
Preference number: 4 (lower is better)
Translates to: AWFIWDMELREEAAGPVPASFLV*GASLHL
Trigger: CAGGTGGAGGGAAGCGCCCCAGACAAGGAAGCTGGC...TGGCACTGGCCCAGCAGCCTCTTCTCTGAGCTCCATGTCCCAGATAAACCAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp GCCTCTGGGGAGCCTTCTCAGTCTGGCCTGGTTTATCTGGGACATGGAGCTCAGGCCAGCTTCCTTGTCTaGGGCGCTTCCCTCCACCTG +
Preference number: 4 (lower is better)
Translates to: ASGEPSQSGLVYLGHGAQASFLV*GASLHL
Trigger: CAGGTGGAGGGAAGCGCCCCAGACAAGGAAGCTGGC...CTGAGCTCCATGTCCCAGATAAACCAGGCCAGACTGAGAAGGCTCCCCAGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp TCTGGGACATGGAGCTCAGAGAAGAGGCTGCTGGGCCAGTGCCAGGGTTCCCCCAGATTCAAGACGAGGTaGTCCCATCGCTGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: SGTWSSEKRLLGQCQGSPRFKTR*SHRCSG
Trigger: CCCAGAGCAGCGATGGGACCACCTCGTCTTGAATCT...GGGGGAACCCTGGCACTGGCCCAGCAGCCTCTTCTCTGAGCTCCATGTCCCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp GTGTTGGTGTTGGGACAGGGTCCCTGCCCGGGCCGCTCGCGAGAGGAGCGTTCCCTCGTCCAGCCTTCTTaGACAAGGTCAGATTCAAGA +
Preference number: 4 (lower is better)
Translates to: VLVLGQGPCPGRSREERSLVQPS*TRSDSR
Trigger: TCTTGAATCTGACCTTGTCCAAGAAGGCTGGACGAG...GGAACGCTCCTCTCGCGAGCGGCCCGGGCAGGGACCCTGTCCCAACACCAACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp AGCGTTCCTGTGTGGGCTGCTCACTGTAGGGCAGGCCCCGCCCAAGTCCCGGCGCTCGTCCAGCCTTCTTaGACAAGGTCAGATTCAAGA +
Preference number: 4 (lower is better)
Translates to: SVPVWAAHCRAGPAQVPALVQPS*TRSDSR
Trigger: TCTTGAATCTGACCTTGTCCAAGAAGGCTGGACGAG...CGCCGGGACTTGGGCGGGGCCTGCCCTACAGTGAGCAGCCCACACAGGAACGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp AGAGGCCTCTGGGGAGCCTTCTCAGTCTGGCCTGGTTTATCTGGGACATGGAGCCCAGGGTTCCCCCTCTaGGAGGGGACAGAAGGTCTC +
Preference number: 4 (lower is better)
Translates to: RGLWGAFSVWPGLSGTWSPGFPL*EGTEGL
Trigger: GAGACCTTCTGTCCCCTCCCAGAGGGGGAACCCTGG...GCTCCATGTCCCAGATAAACCAGGCCAGACTGAGAAGGCTCCCCAGAGGCCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp GCCTCTGGGGAGCCTTCTCAGTCTGGCCTGGTTTATCTGGGACATGGAGCTCAGCCAGGGTTCCCCCTCTaGGAGGGGACAGAAGGTCTC +
Preference number: 4 (lower is better)
Translates to: ASGEPSQSGLVYLGHGAQPGFPL*EGTEGL
Trigger: GAGACCTTCTGTCCCCTCCCAGAGGGGGAACCCTGG...CTGAGCTCCATGTCCCAGATAAACCAGGCCAGACTGAGAAGGCTCCCCAGAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp GCCTCTGGGGAGCCTTCTCAGTCTGGCCTGGTTTATCTGGGACATGGAGCTCAGGGCCACAGAGGCCTCTaGGGAGCCTTCTCAGTCTGG +
Preference number: 4 (lower is better)
Translates to: ASGEPSQSGLVYLGHGAQGHRGL*GAFSVW
Trigger: CCAGACTGAGAAGGCTCCCCAGAGGCCTCTGTGGCC...CTGAGCTCCATGTCCCAGATAAACCAGGCCAGACTGAGAAGGCTCCCCAGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp AGAGGCCTCTGGGGAGCCTTCTCAGTCTGGCCTGGTTTATCTGGGACATGGAGCGGCCACAGAGGCCTCTaGGGAGCCTTCTCAGTCTGG +
Preference number: 4 (lower is better)
Translates to: RGLWGAFSVWPGLSGTWSGHRGL*GAFSVW
Trigger: CCAGACTGAGAAGGCTCCCCAGAGGCCTCTGTGGCC...GCTCCATGTCCCAGATAAACCAGGCCAGACTGAGAAGGCTCCCCAGAGGCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp GGTTTATCTGGGACATGGAGCTCAGAGAAGAGGCTGCTGGGCCAGTGCCAGGGTAGGGCTTTCCCGGAGTaGAGGCCACAGAGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: GLSGTWSSEKRLLGQCQGRAFPE*RPQRPL
Trigger: CAGAGGCCTCTGTGGCCTCCACTCCGGGAAAGCCCT...ACCCTGGCACTGGCCCAGCAGCCTCTTCTCTGAGCTCCATGTCCCAGATAAACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp GGTTTATCTGGGACATGGAGCTCAGAGAAGAGGCTGCTGGGCCAGTGCCAGGGTAGGAGGTGTTGGTGTTaGGACAGGGTCCCTGCCCGG +
Preference number: 4 (lower is better)
Translates to: GLSGTWSSEKRLLGQCQGRRCWC*DRVPAR
Trigger: CCGGGCAGGGACCCTGTCCCAACACCAACACCTCCT...ACCCTGGCACTGGCCCAGCAGCCTCTTCTCTGAGCTCCATGTCCCAGATAAACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp GCCTGGTTTATCTGGGACATGGAGCTCAGAGAAGAGGCTGCTGGGCCAGTGCCAAGGAGGTGTTGGTGTTaGGACAGGGTCCCTGCCCGG +
Preference number: 4 (lower is better)
Translates to: AWFIWDMELREEAAGPVPRRCWC*DRVPAR
Trigger: CCGGGCAGGGACCCTGTCCCAACACCAACACCTCCT...TGGCACTGGCCCAGCAGCCTCTTCTCTGAGCTCCATGTCCCAGATAAACCAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp TGGGTCCTAGGTGTCACTTATCCTGGTGGACAGGGCAGAGGTGGTCAGATCGTTGTTGCCTTGGCGACCTaGGCTGCCGAACTCCCGCGG +
Preference number: 4 (lower is better)
Translates to: WVLGVTYPGGQGRGGQIVVALAT*AAELPR
Trigger: CCGCGGGAGTTCGGCAGCCCAGGTCGCCAAGGCAAC...AACGATCTGACCACCTCTGCCCTGTCCACCAGGATAAGTGACACCTAGGACCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR TCA 90 bp GCCTGGTTTATCTGGGACATGGAGCTCAGAGAAGAGGCTGCTGGGCCAGTGCCACACGCTCACAGCCTCTaGGTCTCCCTGGATGTCAGG +
Preference number: 4 (lower is better)
Translates to: AWFIWDMELREEAAGPVPHAHSL*VSLDVR
Trigger: CCTGACATCCAGGGAGACTCAGAGGCTGTGAGCGTG...TGGCACTGGCCCAGCAGCCTCTTCTCTGAGCTCCATGTCCCAGATAAACCAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR TCA 90 bp CTTTGTTGGGTCTTAAGGCTTGGAACTGGAATCCCCCTGGGCCAGGCGTGGTGGCACGCTCACAGCCTCTaGGTCTCCCTGGATGTCAGG +
Preference number: 4 (lower is better)
Translates to: LCWVLRLGTGIPLGQAWWHAHSL*VSLDVR
Trigger: CCTGACATCCAGGGAGACTCAGAGGCTGTGAGCGTG...CCACCACGCCTGGCCCAGGGGGATTCCAGTTCCAAGCCTTAAGACCCAACAAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372887.5
CDS-3UTR TCA 90 bp TCCCTGCCCGGGCCGCTCGCGAGAGGAGCGTTCCTGTGTGGGCTGCTCACTGTAGTGGTCAGATCGTTTTaGGCCAAAATCCCTTCCCTA +
Preference number: 4 (lower is better)
Translates to: SLPGPLARGAFLCGLLTVVVRSF*AKIPSL
Trigger: TAGGGAAGGGATTTTGGCTCAAAACGATCTGACCAC...TACAGTGAGCAGCCCACACAGGAACGCTCCTCTCGCGAGCGGCCCGGGCAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR GCA 90 bp AGAGGCCTCTGGGGAGCCTTCTCAGTCTGGCCTGGTTTATCTGGGACATGGAGCGCTCAGAGAAGAGGCTaGTGGGCCAGTGCCAGGGTT +
Preference number: 4 (lower is better)
Translates to: RGLWGAFSVWPGLSGTWSAQRRG*WASARV
Trigger: AACCCTGGCACTGGCCCAGCAGCCTCTTCTCTGAGC...GCTCCATGTCCCAGATAAACCAGGCCAGACTGAGAAGGCTCCCCAGAGGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR GCA 90 bp GGTTTATCTGGGACATGGAGCTCAGAGAAGAGGCTGCTGGGCCAGTGCCAGGGTGCTCAGAGAAGAGGCTaGTGGGCCAGTGCCAGGGTT +
Preference number: 4 (lower is better)
Translates to: GLSGTWSSEKRLLGQCQGAQRRG*WASARV
Trigger: AACCCTGGCACTGGCCCAGCAGCCTCTTCTCTGAGC...ACCCTGGCACTGGCCCAGCAGCCTCTTCTCTGAGCTCCATGTCCCAGATAAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR GCA 90 bp GCCTGGTTTATCTGGGACATGGAGCTCAGAGAAGAGGCTGCTGGGCCAGTGCCAGCTCAGAGAAGAGGCTaGTGGGCCAGTGCCAGGGTT +
Preference number: 4 (lower is better)
Translates to: AWFIWDMELREEAAGPVPAQRRG*WASARV
Trigger: AACCCTGGCACTGGCCCAGCAGCCTCTTCTCTGAGC...TGGCACTGGCCCAGCAGCCTCTTCTCTGAGCTCCATGTCCCAGATAAACCAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp GTGTTGGTGTTGGGACAGGGTCCCTGCCCGGGCCGCTCGCGAGAGGAGCGTTCCCTAAAAATGGATCTGTaGAGCTCCATGAGGGAACCT +
Preference number: 4 (lower is better)
Translates to: VLVLGQGPCPGRSREERSLKMDL*SSMREP
Trigger: AGGTTCCCTCATGGAGCTCCACAGATCCATTTTTAG...GGAACGCTCCTCTCGCGAGCGGCCCGGGCAGGGACCCTGTCCCAACACCAACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp AGCGTTCCTGTGTGGGCTGCTCACTGTAGGGCAGGCCCCGCCCAAGTCCCGGCGCTAAAAATGGATCTGTaGAGCTCCATGAGGGAACCT +
Preference number: 4 (lower is better)
Translates to: SVPVWAAHCRAGPAQVPALKMDL*SSMREP
Trigger: AGGTTCCCTCATGGAGCTCCACAGATCCATTTTTAG...CGCCGGGACTTGGGCGGGGCCTGCCCTACAGTGAGCAGCCCACACAGGAACGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp TCTGGGACATGGAGCTCAGAGAAGAGGCTGCTGGGCCAGTGCCAGGGTTCCCCCTGGACAGGGCAGAGGTaGTCAGATCGTTTTGAGCCA +
Preference number: 4 (lower is better)
Translates to: SGTWSSEKRLLGQCQGSPWTGQR*SDRFEP
Trigger: TGGCTCAAAACGATCTGACCACCTCTGCCCTGTCCA...GGGGGAACCCTGGCACTGGCCCAGCAGCCTCTTCTCTGAGCTCCATGTCCCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR TCA 90 bp CTCAGTCTGGCCTGGTTTATCTGGGACATGGAGCTCAGAGAAGAGGCTGCTGGGCACGCTCACAGCCTCTaGGTCTCCCTGGATGTCAGG +
Preference number: 4 (lower is better)
Translates to: LSLAWFIWDMELREEAAGHAHSL*VSLDVR
Trigger: CCTGACATCCAGGGAGACTCAGAGGCTGTGAGCGTG...CCCAGCAGCCTCTTCTCTGAGCTCCATGTCCCAGATAAACCAGGCCAGACTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR TCA 90 bp AGTGTGTCTTTGTTGGGTCTTAAGGCTTGGAACTGGAATCCCCCTGGGCCAGGCGAGGCTGGCCCTGGGTaGGCTTGTCTCCCACCCATA +
Preference number: 4 (lower is better)
Translates to: SVSLLGLKAWNWNPPGPGEAGPG*ACLPPI
Trigger: TATGGGTGGGAGACAAGCTCACCCAGGGCCAGCCTC...GCCTGGCCCAGGGGGATTCCAGTTCCAAGCCTTAAGACCCAACAAAGACACACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372887.5
CDS-3UTR GCA 90 bp GGGAGCCTTCTCAGTCTGGCCTGGTTTATCTGGGACATGGAGCTCAGAGAAGAGCTCCACCTGTCCTTCTaGCCCCTCGAGTGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: GSLLSLAWFIWDMELREELHLSF*PLECQL
Trigger: GAGCTGGCACTCGAGGGGGCAGAAGGACAGGTGGAG...CTCTTCTCTGAGCTCCATGTCCCAGATAAACCAGGCCAGACTGAGAAGGCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR GCA 90 bp TGGGTCCTAGGTGTCACTTATCCTGGTGGACAGGGCAGAGGTGGTCAGATCGTTAGGTGGTCCCATCGCTaGTCTGGGGCTGGTTGCCAG +
Preference number: 4 (lower is better)
Translates to: WVLGVTYPGGQGRGGQIVRWSHR*SGAGCQ
Trigger: CTGGCAACCAGCCCCAGAGCAGCGATGGGACCACCT...AACGATCTGACCACCTCTGCCCTGTCCACCAGGATAAGTGACACCTAGGACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR GCA 90 bp GGGAGCCTTCTCAGTCTGGCCTGGTTTATCTGGGACATGGAGCTCAGAGAAGAGAGGTGGTCCCATCGCTaGTCTGGGGCTGGTTGCCAG +
Preference number: 4 (lower is better)
Translates to: GSLLSLAWFIWDMELREERWSHR*SGAGCQ
Trigger: CTGGCAACCAGCCCCAGAGCAGCGATGGGACCACCT...CTCTTCTCTGAGCTCCATGTCCCAGATAAACCAGGCCAGACTGAGAAGGCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR GCA 90 bp CTCAGTCTGGCCTGGTTTATCTGGGACATGGAGCTCAGAGAAGAGGCTGCTGGGGCTCAGAGAAGAGGCTaGTGGGCCAGTGCCAGGGTT +
Preference number: 4 (lower is better)
Translates to: LSLAWFIWDMELREEAAGAQRRG*WASARV
Trigger: AACCCTGGCACTGGCCCAGCAGCCTCTTCTCTGAGC...CCCAGCAGCCTCTTCTCTGAGCTCCATGTCCCAGATAAACCAGGCCAGACTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR GCA 90 bp TGGCCTGGTTTATCTGGGACATGGAGCTCAGAGAAGAGGCTGCTGGGCCAGTGCTGTACCTGGGCACGGTaGGAAGGTGGTGGGAATGTG +
Preference number: 4 (lower is better)
Translates to: WPGLSGTWSSEKRLLGQCCTWAR*EGGGNV
Trigger: CACATTCCCACCACCTTCGCACCGTGCCCAGGTACA...GCACTGGCCCAGCAGCCTCTTCTCTGAGCTCCATGTCCCAGATAAACCAGGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR GCA 90 bp CCCACCCATAGTTGGGAGAAATCACAAGAACCAGGGACCATGGTGTCTCCTGAGCTCTGCCCCCTCGAGTaGCAGCTCGCCCATGTCTCC +
Preference number: 4 (lower is better)
Translates to: PTHSWEKSQEPGTMVSPELCPLE*QLAHVS
Trigger: GGAGACATGGGCGAGCTGGCACTCGAGGGGGCAGAG...CTCAGGAGACACCATGGTCCCTGGTTCTTGTGATTTCTCCCAACTATGGGTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372887.5
CDS-3UTR CCA 90 bp GGTTTATCTGGGACATGGAGCTCAGAGAAGAGGCTGCTGGGCCAGTGCCAGGGTTCGCTGCTCTGGGGCTaGTTGCCAGCTTCCTTGTCT +
Preference number: 4 (lower is better)
Translates to: GLSGTWSSEKRLLGQCQGSLLWG*LPASLS
Trigger: AGACAAGGAAGCTGGCAACCAGCCCCAGAGCAGCGA...ACCCTGGCACTGGCCCAGCAGCCTCTTCTCTGAGCTCCATGTCCCAGATAAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp GCCTCTGGGGAGCCTTCTCAGTCTGGCCTGGTTTATCTGGGACATGGAGCTCAGTCGCTGCTCTGGGGCTaGTTGCCAGCTTCCTTGTCT +
Preference number: 4 (lower is better)
Translates to: ASGEPSQSGLVYLGHGAQSLLWG*LPASLS
Trigger: AGACAAGGAAGCTGGCAACCAGCCCCAGAGCAGCGA...CTGAGCTCCATGTCCCAGATAAACCAGGCCAGACTGAGAAGGCTCCCCAGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp TGGGTCCTAGGTGTCACTTATCCTGGTGGACAGGGCAGAGGTGGTCAGATCGTTGGCCACAGAGGCCTCTaGGGAGCCTTCTCAGTCTGG +
Preference number: 4 (lower is better)
Translates to: WVLGVTYPGGQGRGGQIVGHRGL*GAFSVW
Trigger: CCAGACTGAGAAGGCTCCCCAGAGGCCTCTGTGGCC...AACGATCTGACCACCTCTGCCCTGTCCACCAGGATAAGTGACACCTAGGACCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp TGGCCTGGTTTATCTGGGACATGGAGCTCAGAGAAGAGGCTGCTGGGCCAGTGCACGGTGCGAAGGTGGTaGGAATGTGAAGCCTGTGGG +
Preference number: 4 (lower is better)
Translates to: WPGLSGTWSSEKRLLGQCTVRRW*ECEACG
Trigger: CCCACAGGCTTCACATTCCCACCACCTTCGCACCGT...GCACTGGCCCAGCAGCCTCTTCTCTGAGCTCCATGTCCCAGATAAACCAGGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp GGTTTATCTGGGACATGGAGCTCAGAGAAGAGGCTGCTGGGCCAGTGCCAGGGTACGGTGCGAAGGTGGTaGGAATGTGAAGCCTGTGGG +
Preference number: 4 (lower is better)
Translates to: GLSGTWSSEKRLLGQCQGTVRRW*ECEACG
Trigger: CCCACAGGCTTCACATTCCCACCACCTTCGCACCGT...ACCCTGGCACTGGCCCAGCAGCCTCTTCTCTGAGCTCCATGTCCCAGATAAACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp GCCTCTGGGGAGCCTTCTCAGTCTGGCCTGGTTTATCTGGGACATGGAGCTCAGACGGTGCGAAGGTGGTaGGAATGTGAAGCCTGTGGG +
Preference number: 4 (lower is better)
Translates to: ASGEPSQSGLVYLGHGAQTVRRW*ECEACG
Trigger: CCCACAGGCTTCACATTCCCACCACCTTCGCACCGT...CTGAGCTCCATGTCCCAGATAAACCAGGCCAGACTGAGAAGGCTCCCCAGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp AGAGGCCTCTGGGGAGCCTTCTCAGTCTGGCCTGGTTTATCTGGGACATGGAGCACGGTGCGAAGGTGGTaGGAATGTGAAGCCTGTGGG +
Preference number: 4 (lower is better)
Translates to: RGLWGAFSVWPGLSGTWSTVRRW*ECEACG
Trigger: CCCACAGGCTTCACATTCCCACCACCTTCGCACCGT...GCTCCATGTCCCAGATAAACCAGGCCAGACTGAGAAGGCTCCCCAGAGGCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp AGAGGCCTCTGGGGAGCCTTCTCAGTCTGGCCTGGTTTATCTGGGACATGGAGCAGGAGCGTTCCTGTGTaGGCTGCTCACTGTAGGGCA +
Preference number: 4 (lower is better)
Translates to: RGLWGAFSVWPGLSGTWSRSVPV*AAHCRA
Trigger: TGCCCTACAGTGAGCAGCCCACACAGGAACGCTCCT...GCTCCATGTCCCAGATAAACCAGGCCAGACTGAGAAGGCTCCCCAGAGGCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp GGGAGCCTTCTCAGTCTGGCCTGGTTTATCTGGGACATGGAGCTCAGAGAAGAGAGGAGGTGTTGGTGTTaGGACAGGGTCCCTGCCCGG +
Preference number: 4 (lower is better)
Translates to: GSLLSLAWFIWDMELREERRCWC*DRVPAR
Trigger: CCGGGCAGGGACCCTGTCCCAACACCAACACCTCCT...CTCTTCTCTGAGCTCCATGTCCCAGATAAACCAGGCCAGACTGAGAAGGCTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp TGTTGGGACAGGGTCCCTGCCCGGGCCGCTCGCGAGAGGAGCGTTCCTGTGTGGTCGGCATTTATTTCCTaGGTCCTAGGTGTCACTTAT +
Preference number: 4 (lower is better)
Translates to: CWDRVPARAARERSVPVWSAFIS*VLGVTY
Trigger: ATAAGTGACACCTAGGACCCAGGAAATAAATGCCGA...CCACACAGGAACGCTCCTCTCGCGAGCGGCCCGGGCAGGGACCCTGTCCCAACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp TGGGTCTTAAGGCTTGGAACTGGAATCCCCCTGGGCCAGGCGTGGTGGTTCATGCTTAAGGCTTGGAACTaGAATCCCCCTGGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: WVLRLGTGIPLGQAWWFMLKAWN*NPPGPG
Trigger: GCCTGGCCCAGGGGGATTCCAGTTCCAAGCCTTAAG...CATGAACCACCACGCCTGGCCCAGGGGGATTCCAGTTCCAAGCCTTAAGACCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000372887.5
CDS-3UTR TCA 90 bp TGGGTCCTAGGTGTCACTTATCCTGGTGGACAGGGCAGAGGTGGTCAGATCGTTCACGCTCACAGCCTCTaGGTCTCCCTGGATGTCAGG +
Preference number: 4 (lower is better)
Translates to: WVLGVTYPGGQGRGGQIVHAHSL*VSLDVR
Trigger: CCTGACATCCAGGGAGACTCAGAGGCTGTGAGCGTG...AACGATCTGACCACCTCTGCCCTGTCCACCAGGATAAGTGACACCTAGGACCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR TCA 90 bp TCTGGGACATGGAGCTCAGAGAAGAGGCTGCTGGGCCAGTGCCAGGGTTCCCCCGTGGTCAGATCGTTTTaGGCCAAAATCCCTTCCCTA +
Preference number: 4 (lower is better)
Translates to: SGTWSSEKRLLGQCQGSPVVRSF*AKIPSL
Trigger: TAGGGAAGGGATTTTGGCTCAAAACGATCTGACCAC...GGGGGAACCCTGGCACTGGCCCAGCAGCCTCTTCTCTGAGCTCCATGTCCCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR TCA 90 bp TGTTGGGACAGGGTCCCTGCCCGGGCCGCTCGCGAGAGGAGCGTTCCTGTGTGGCAGATTTTCCACTGTTaGCTAATCAGTACGGGAATT +
Preference number: 4 (lower is better)
Translates to: CWDRVPARAARERSVPVWQIFHC*LISTGI
Trigger: AATTCCCGTACTGATTAGTCAACAGTGGAAAATCTG...CCACACAGGAACGCTCCTCTCGCGAGCGGCCCGGGCAGGGACCCTGTCCCAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR GCA 90 bp TTGGGTCTTAAGGCTTGGAACTGGAATCCCCCTGGGCCAGGCGTGGTGGTTCATCAGGAAGCAGCCTCTTaGCTGGACATGTCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: LGLKAWNWNPPGPGVVVHQEAAS*LDMSRP
Trigger: AGGCCTGGACATGTCCAGGCAAGAGGCTGCTTCCTG...ATGAACCACCACGCCTGGCCCAGGGGGATTCCAGTTCCAAGCCTTAAGACCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372887.5
CDS-3UTR CCA 90 bp CTCAGTCTGGCCTGGTTTATCTGGGACATGGAGCTCAGAGAAGAGGCTGCTGGGTCGCTGCTCTGGGGCTaGTTGCCAGCTTCCTTGTCT +
Preference number: 4 (lower is better)
Translates to: LSLAWFIWDMELREEAAGSLLWG*LPASLS
Trigger: AGACAAGGAAGCTGGCAACCAGCCCCAGAGCAGCGA...CCCAGCAGCCTCTTCTCTGAGCTCCATGTCCCAGATAAACCAGGCCAGACTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp AGAGGCCTCTGGGGAGCCTTCTCAGTCTGGCCTGGTTTATCTGGGACATGGAGCAGATTCAAGACGAGGTaGTCCCATCGCTGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: RGLWGAFSVWPGLSGTWSRFKTR*SHRCSG
Trigger: CCCAGAGCAGCGATGGGACCACCTCGTCTTGAATCT...GCTCCATGTCCCAGATAAACCAGGCCAGACTGAGAAGGCTCCCCAGAGGCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp GGTTACAGTGTCTTGAAAGTGTACCTGGGCACGGTGCGAAGGTGGTGGGAATGTGGCCACAGAGGCCTCTaGGGAGCCTTCTCAGTCTGG +
Preference number: 4 (lower is better)
Translates to: GYSVLKVYLGTVRRWWECGHRGL*GAFSVW
Trigger: CCAGACTGAGAAGGCTCCCCAGAGGCCTCTGTGGCC...ACATTCCCACCACCTTCGCACCGTGCCCAGGTACACTTTCAAGACACTGTAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp CTCAGTCTGGCCTGGTTTATCTGGGACATGGAGCTCAGAGAAGAGGCTGCTGGGACGGTGCGAAGGTGGTaGGAATGTGAAGCCTGTGGG +
Preference number: 4 (lower is better)
Translates to: LSLAWFIWDMELREEAAGTVRRW*ECEACG
Trigger: CCCACAGGCTTCACATTCCCACCACCTTCGCACCGT...CCCAGCAGCCTCTTCTCTGAGCTCCATGTCCCAGATAAACCAGGCCAGACTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp CTCAGTCTGGCCTGGTTTATCTGGGACATGGAGCTCAGAGAAGAGGCTGCTGGGGGCACGGTGCGAAGGTaGTGGGAATGTGAAGCCTGT +
Preference number: 4 (lower is better)
Translates to: LSLAWFIWDMELREEAAGGTVRR*WECEAC
Trigger: ACAGGCTTCACATTCCCACCACCTTCGCACCGTGCC...CCCAGCAGCCTCTTCTCTGAGCTCCATGTCCCAGATAAACCAGGCCAGACTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp CTCAGTCTGGCCTGGTTTATCTGGGACATGGAGCTCAGAGAAGAGGCTGCTGGGAGGAGCGTTCCTGTGTaGGCTGCTCACTGTAGGGCA +
Preference number: 4 (lower is better)
Translates to: LSLAWFIWDMELREEAAGRSVPV*AAHCRA
Trigger: TGCCCTACAGTGAGCAGCCCACACAGGAACGCTCCT...CCCAGCAGCCTCTTCTCTGAGCTCCATGTCCCAGATAAACCAGGCCAGACTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp GGTTTATCTGGGACATGGAGCTCAGAGAAGAGGCTGCTGGGCCAGTGCCAGGGTAGGGACAAGCAGGTCTaGACCCAGAAGATTGGGCTG +
Preference number: 4 (lower is better)
Translates to: GLSGTWSSEKRLLGQCQGRDKQV*TQKIGL
Trigger: CAGCCCAATCTTCTGGGTCCAGACCTGCTTGTCCCT...ACCCTGGCACTGGCCCAGCAGCCTCTTCTCTGAGCTCCATGTCCCAGATAAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp TGGCCTGGTTTATCTGGGACATGGAGCTCAGAGAAGAGGCTGCTGGGCCAGTGCAGGGACAAGCAGGTCTaGACCCAGAAGATTGGGCTG +
Preference number: 4 (lower is better)
Translates to: WPGLSGTWSSEKRLLGQCRDKQV*TQKIGL
Trigger: CAGCCCAATCTTCTGGGTCCAGACCTGCTTGTCCCT...GCACTGGCCCAGCAGCCTCTTCTCTGAGCTCCATGTCCCAGATAAACCAGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp TGGCCTGGTTTATCTGGGACATGGAGCTCAGAGAAGAGGCTGCTGGGCCAGTGCAGGTGTCACTTATCCTaGTGGACAGGGCAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: WPGLSGTWSSEKRLLGQCRCHLS*WTGQRW
Trigger: CCACCTCTGCCCTGTCCACCAGGATAAGTGACACCT...GCACTGGCCCAGCAGCCTCTTCTCTGAGCTCCATGTCCCAGATAAACCAGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp GCCTGGTTTATCTGGGACATGGAGCTCAGAGAAGAGGCTGCTGGGCCAGTGCCAAGGTGTCACTTATCCTaGTGGACAGGGCAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: AWFIWDMELREEAAGPVPRCHLS*WTGQRW
Trigger: CCACCTCTGCCCTGTCCACCAGGATAAGTGACACCT...TGGCACTGGCCCAGCAGCCTCTTCTCTGAGCTCCATGTCCCAGATAAACCAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp TCTGGGACATGGAGCTCAGAGAAGAGGCTGCTGGGCCAGTGCCAGGGTTCCCCCTTCCTCAAAATCCAGTaGTCCTCAGTCAGAAGCGGA +
Preference number: 4 (lower is better)
Translates to: SGTWSSEKRLLGQCQGSPFLKIQ*SSVRSG
Trigger: TCCGCTTCTGACTGAGGACCACTGGATTTTGAGGAA...GGGGGAACCCTGGCACTGGCCCAGCAGCCTCTTCTCTGAGCTCCATGTCCCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
CDS-3UTR CCA 90 bp TTGTTGGGTCTTAAGGCTTGGAACTGGAATCCCCCTGGGCCAGGCGTGGTGGTTTCCTGTGAGAAGGAATaGAGAGGCTGGCCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: LLGLKAWNWNPPGPGVVVSCEKE*RGWPWV
Trigger: CACCCAGGGCCAGCCTCTCCATTCCTTCTCACAGGA...AACCACCACGCCTGGCCCAGGGGGATTCCAGTTCCAAGCCTTAAGACCCAACAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372887.5
CDS-3UTR TCA 90 bp CTCAGTCTGGCCTGGTTTATCTGGGACATGGAGCTCAGAGAAGAGGCTGCTGGGTCCGGTCACAGGAGATaGAGTCCGAGTAGGAGGACT +
Preference number: 4 (lower is better)
Translates to: LSLAWFIWDMELREEAAGSGHRR*SPSRRT
Trigger: AGTCCTCCTACTCGGACTTCATCTCCTGTGACCGGA...CCCAGCAGCCTCTTCTCTGAGCTCCATGTCCCAGATAAACCAGGCCAGACTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR TCA 90 bp GCCTGGTTTATCTGGGACATGGAGCTCAGAGAAGAGGCTGCTGGGCCAGTGCCAGTGGTTACAGTGTCTTaGAAGTGTACCTGGGCACGG +
Preference number: 4 (lower is better)
Translates to: AWFIWDMELREEAAGPVPVVTVS*KCTWAR
Trigger: CCGTGCCCAGGTACACTTTCAAGACACTGTAACCAC...TGGCACTGGCCCAGCAGCCTCTTCTCTGAGCTCCATGTCCCAGATAAACCAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR TCA 90 bp GCCTCTGGGGAGCCTTCTCAGTCTGGCCTGGTTTATCTGGGACATGGAGCTCAGGTGGTTACAGTGTCTTaGAAGTGTACCTGGGCACGG +
Preference number: 4 (lower is better)
Translates to: ASGEPSQSGLVYLGHGAQVVTVS*KCTWAR
Trigger: CCGTGCCCAGGTACACTTTCAAGACACTGTAACCAC...CTGAGCTCCATGTCCCAGATAAACCAGGCCAGACTGAGAAGGCTCCCCAGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR TCA 90 bp GCCTCTGGGGAGCCTTCTCAGTCTGGCCTGGTTTATCTGGGACATGGAGCTCAGATCTGTGGAGCTCCATaGGGGAACCTCAGAGATGCA +
Preference number: 4 (lower is better)
Translates to: ASGEPSQSGLVYLGHGAQICGAP*GNLRDA
Trigger: TGCATCTCTGAGGTTCCCTCATGGAGCTCCACAGAT...CTGAGCTCCATGTCCCAGATAAACCAGGCCAGACTGAGAAGGCTCCCCAGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR TCA 90 bp TGGCCTGGTTTATCTGGGACATGGAGCTCAGAGAAGAGGCTGCTGGGCCAGTGCATCTGTGGAGCTCCATaGGGGAACCTCAGAGATGCA +
Preference number: 4 (lower is better)
Translates to: WPGLSGTWSSEKRLLGQCICGAP*GNLRDA
Trigger: TGCATCTCTGAGGTTCCCTCATGGAGCTCCACAGAT...GCACTGGCCCAGCAGCCTCTTCTCTGAGCTCCATGTCCCAGATAAACCAGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR GCA 90 bp CTCAGTCTGGCCTGGTTTATCTGGGACATGGAGCTCAGAGAAGAGGCTGCTGGGACTCGACCTCCATCATaGCTGTCGCATCGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: LSLAWFIWDMELREEAAGTRPPS*LSHRSS
Trigger: TGAGGAGCGATGCGACAGGCATGATGGAGGTCGAGT...CCCAGCAGCCTCTTCTCTGAGCTCCATGTCCCAGATAAACCAGGCCAGACTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR GCA 90 bp TTGGGTCTTAAGGCTTGGAACTGGAATCCCCCTGGGCCAGGCGTGGTGGTTCATACTCGACCTCCATCATaGCTGTCGCATCGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: LGLKAWNWNPPGPGVVVHTRPPS*LSHRSS
Trigger: TGAGGAGCGATGCGACAGGCATGATGGAGGTCGAGT...ATGAACCACCACGCCTGGCCCAGGGGGATTCCAGTTCCAAGCCTTAAGACCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372887.5
CDS-3UTR GCA 90 bp TGGGTCCTAGGTGTCACTTATCCTGGTGGACAGGGCAGAGGTGGTCAGATCGTTTGTACCTGGGCACGGTaGGAAGGTGGTGGGAATGTG +
Preference number: 4 (lower is better)
Translates to: WVLGVTYPGGQGRGGQIVCTWAR*EGGGNV
Trigger: CACATTCCCACCACCTTCGCACCGTGCCCAGGTACA...AACGATCTGACCACCTCTGCCCTGTCCACCAGGATAAGTGACACCTAGGACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR GCA 90 bp GGGAGCCTTCTCAGTCTGGCCTGGTTTATCTGGGACATGGAGCTCAGAGAAGAGTGTACCTGGGCACGGTaGGAAGGTGGTGGGAATGTG +
Preference number: 4 (lower is better)
Translates to: GSLLSLAWFIWDMELREECTWAR*EGGGNV
Trigger: CACATTCCCACCACCTTCGCACCGTGCCCAGGTACA...CTCTTCTCTGAGCTCCATGTCCCAGATAAACCAGGCCAGACTGAGAAGGCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR GCA 90 bp AGAGGCCTCTGGGGAGCCTTCTCAGTCTGGCCTGGTTTATCTGGGACATGGAGCAGTCCAGACCTGTGGTaGGGGCAGGATTCTCACTTT +
Preference number: 4 (lower is better)
Translates to: RGLWGAFSVWPGLSGTWSSPDLW*GQDSHF
Trigger: AAAGTGAGAATCCTGCCCGCACCACAGGTCTGGACT...GCTCCATGTCCCAGATAAACCAGGCCAGACTGAGAAGGCTCCCCAGAGGCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
CDS-3UTR GCA 90 bp CTTTGTTGGGTCTTAAGGCTTGGAACTGGAATCCCCCTGGGCCAGGCGTGGTGGAGTCCAGACCTGTGGTaGGGGCAGGATTCTCACTTT +
Preference number: 4 (lower is better)
Translates to: LCWVLRLGTGIPLGQAWWSPDLW*GQDSHF
Trigger: AAAGTGAGAATCCTGCCCGCACCACAGGTCTGGACT...CCACCACGCCTGGCCCAGGGGGATTCCAGTTCCAAGCCTTAAGACCCAACAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372887.5
CDS-3UTR CCA 90 bp GGTTTATCTGGGACATGGAGCTCAGAGAAGAGGCTGCTGGGCCAGTGCCAGGGTGGAGCCTTCTCAGTCTaGCCTGGTTTATCTGGGACA +
Preference number: 4 (lower is better)
Translates to: GLSGTWSSEKRLLGQCQGGAFSV*PGLSGT
Trigger: TGTCCCAGATAAACCAGGCCAGACTGAGAAGGCTCC...ACCCTGGCACTGGCCCAGCAGCCTCTTCTCTGAGCTCCATGTCCCAGATAAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp GGGAGCCTTCTCAGTCTGGCCTGGTTTATCTGGGACATGGAGCTCAGAGAAGAGGGCACGGTGCGAAGGTaGTGGGAATGTGAAGCCTGT +
Preference number: 4 (lower is better)
Translates to: GSLLSLAWFIWDMELREEGTVRR*WECEAC
Trigger: ACAGGCTTCACATTCCCACCACCTTCGCACCGTGCC...CTCTTCTCTGAGCTCCATGTCCCAGATAAACCAGGCCAGACTGAGAAGGCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp TGGGTCCTAGGTGTCACTTATCCTGGTGGACAGGGCAGAGGTGGTCAGATCGTTAGGAGCGTTCCTGTGTaGGCTGCTCACTGTAGGGCA +
Preference number: 4 (lower is better)
Translates to: WVLGVTYPGGQGRGGQIVRSVPV*AAHCRA
Trigger: TGCCCTACAGTGAGCAGCCCACACAGGAACGCTCCT...AACGATCTGACCACCTCTGCCCTGTCCACCAGGATAAGTGACACCTAGGACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp GCCTGGTTTATCTGGGACATGGAGCTCAGAGAAGAGGCTGCTGGGCCAGTGCCACCCAGAAGATTGGGCTaGAGAGGAGGTGTTGGTGTT +
Preference number: 4 (lower is better)
Translates to: AWFIWDMELREEAAGPVPPRRLG*RGGVGV
Trigger: AACACCAACACCTCCTCTCCAGCCCAATCTTCTGGG...TGGCACTGGCCCAGCAGCCTCTTCTCTGAGCTCCATGTCCCAGATAAACCAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp TCTGGGACATGGAGCTCAGAGAAGAGGCTGCTGGGCCAGTGCCAGGGTTCCCCCCTAAAAATGGATCTGTaGAGCTCCATGAGGGAACCT +
Preference number: 4 (lower is better)
Translates to: SGTWSSEKRLLGQCQGSPLKMDL*SSMREP
Trigger: AGGTTCCCTCATGGAGCTCCACAGATCCATTTTTAG...GGGGGAACCCTGGCACTGGCCCAGCAGCCTCTTCTCTGAGCTCCATGTCCCAGA
57% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp AGAGGCCTCTGGGGAGCCTTCTCAGTCTGGCCTGGTTTATCTGGGACATGGAGCTGGACAGGGCAGAGGTaGTCAGATCGTTTTGAGCCA +
Preference number: 4 (lower is better)
Translates to: RGLWGAFSVWPGLSGTWSWTGQR*SDRFEP
Trigger: TGGCTCAAAACGATCTGACCACCTCTGCCCTGTCCA...GCTCCATGTCCCAGATAAACCAGGCCAGACTGAGAAGGCTCCCCAGAGGCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp CTCAGTCTGGCCTGGTTTATCTGGGACATGGAGCTCAGAGAAGAGGCTGCTGGGAGGTGTCACTTATCCTaGTGGACAGGGCAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: LSLAWFIWDMELREEAAGRCHLS*WTGQRW
Trigger: CCACCTCTGCCCTGTCCACCAGGATAAGTGACACCT...CCCAGCAGCCTCTTCTCTGAGCTCCATGTCCCAGATAAACCAGGCCAGACTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp TGGAGAGGCTGGCCCTGGGTGAGCTTGTCTCCCACCCATAGTTGGGAGAAATCAAAGCAGCCTCTTGCCTaGACATGTCCAGGCCTACCA +
Preference number: 4 (lower is better)
Translates to: WRGWPWVSLSPTHSWEKSKQPLA*TCPGLP
Trigger: TGGTAGGCCTGGACATGTCCAGGCAAGAGGCTGCTT...TGATTTCTCCCAACTATGGGTGGGAGACAAGCTCACCCAGGGCCAGCCTCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372887.5
CDS-3UTR TCA 90 bp CTCAGTCTGGCCTGGTTTATCTGGGACATGGAGCTCAGAGAAGAGGCTGCTGGGATCTGTGGAGCTCCATaGGGGAACCTCAGAGATGCA +
Preference number: 4 (lower is better)
Translates to: LSLAWFIWDMELREEAAGICGAP*GNLRDA
Trigger: TGCATCTCTGAGGTTCCCTCATGGAGCTCCACAGAT...CCCAGCAGCCTCTTCTCTGAGCTCCATGTCCCAGATAAACCAGGCCAGACTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR GCA 90 bp AACATCTTGTGGTTACAGTGTCTTGAAAGTGTACCTGGGCACGGTGCGAAGGTGTTCTGCCCCCTCGAGTaGCAGCTCGCCCATGTCTCC +
Preference number: 4 (lower is better)
Translates to: NILWLQCLESVPGHGAKVFCPLE*QLAHVS
Trigger: GGAGACATGGGCGAGCTGGCACTCGAGGGGGCAGAA...CACCTTCGCACCGTGCCCAGGTACACTTTCAAGACACTGTAACCACAAGATGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR GCA 90 bp AACATCTTGTGGTTACAGTGTCTTGAAAGTGTACCTGGGCACGGTGCGAAGGTGAGGTGGTCCCATCGCTaGTCTGGGGCTGGTTGCCAG +
Preference number: 4 (lower is better)
Translates to: NILWLQCLESVPGHGAKVRWSHR*SGAGCQ
Trigger: CTGGCAACCAGCCCCAGAGCAGCGATGGGACCACCT...CACCTTCGCACCGTGCCCAGGTACACTTTCAAGACACTGTAACCACAAGATGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp TGGGTCCTAGGTGTCACTTATCCTGGTGGACAGGGCAGAGGTGGTCAGATCGTTAGATTCAAGACGAGGTaGTCCCATCGCTGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: WVLGVTYPGGQGRGGQIVRFKTR*SHRCSG
Trigger: CCCAGAGCAGCGATGGGACCACCTCGTCTTGAATCT...AACGATCTGACCACCTCTGCCCTGTCCACCAGGATAAGTGACACCTAGGACCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp AACATCTTGTGGTTACAGTGTCTTGAAAGTGTACCTGGGCACGGTGCGAAGGTGCCAGGGTTCCCCCTCTaGGAGGGGACAGAAGGTCTC +
Preference number: 4 (lower is better)
Translates to: NILWLQCLESVPGHGAKVPGFPL*EGTEGL
Trigger: GAGACCTTCTGTCCCCTCCCAGAGGGGGAACCCTGG...CACCTTCGCACCGTGCCCAGGTACACTTTCAAGACACTGTAACCACAAGATGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp TGGCCTGGTTTATCTGGGACATGGAGCTCAGAGAAGAGGCTGCTGGGCCAGTGCCTTCTCAGTCTGGCCTaGTTTATCTGGGACATGGAG +
Preference number: 4 (lower is better)
Translates to: WPGLSGTWSSEKRLLGQCLLSLA*FIWDME
Trigger: CTCCATGTCCCAGATAAACCAGGCCAGACTGAGAAG...GCACTGGCCCAGCAGCCTCTTCTCTGAGCTCCATGTCCCAGATAAACCAGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp GCCTCTGGGGAGCCTTCTCAGTCTGGCCTGGTTTATCTGGGACATGGAGCTCAGCTTCTCAGTCTGGCCTaGTTTATCTGGGACATGGAG +
Preference number: 4 (lower is better)
Translates to: ASGEPSQSGLVYLGHGAQLLSLA*FIWDME
Trigger: CTCCATGTCCCAGATAAACCAGGCCAGACTGAGAAG...CTGAGCTCCATGTCCCAGATAAACCAGGCCAGACTGAGAAGGCTCCCCAGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp AACATCTTGTGGTTACAGTGTCTTGAAAGTGTACCTGGGCACGGTGCGAAGGTGAGGGCTTTCCCGGAGTaGAGGCCACAGAGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: NILWLQCLESVPGHGAKVRAFPE*RPQRPL
Trigger: CAGAGGCCTCTGTGGCCTCCACTCCGGGAAAGCCCT...CACCTTCGCACCGTGCCCAGGTACACTTTCAAGACACTGTAACCACAAGATGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp GGTTACAGTGTCTTGAAAGTGTACCTGGGCACGGTGCGAAGGTGGTGGGAATGTGGCACGGTGCGAAGGTaGTGGGAATGTGAAGCCTGT +
Preference number: 4 (lower is better)
Translates to: GYSVLKVYLGTVRRWWECGTVRR*WECEAC
Trigger: ACAGGCTTCACATTCCCACCACCTTCGCACCGTGCC...ACATTCCCACCACCTTCGCACCGTGCCCAGGTACACTTTCAAGACACTGTAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp CTCAGTCTGGCCTGGTTTATCTGGGACATGGAGCTCAGAGAAGAGGCTGCTGGGCCCAGAAGATTGGGCTaGAGAGGAGGTGTTGGTGTT +
Preference number: 4 (lower is better)
Translates to: LSLAWFIWDMELREEAAGPRRLG*RGGVGV
Trigger: AACACCAACACCTCCTCTCCAGCCCAATCTTCTGGG...CCCAGCAGCCTCTTCTCTGAGCTCCATGTCCCAGATAAACCAGGCCAGACTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp TCTGGGACATGGAGCTCAGAGAAGAGGCTGCTGGGCCAGTGCCAGGGTTCCCCCATCGCTCCTCAGGCCTaGTTTAATTTCTTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: SGTWSSEKRLLGQCQGSPIAPQA*FNFFFL
Trigger: CAGGAAAAAGAAATTAAACCAGGCCTGAGGAGCGAT...GGGGGAACCCTGGCACTGGCCCAGCAGCCTCTTCTCTGAGCTCCATGTCCCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000372886.6
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR TCA 90 bp GGGAGCCTTCTCAGTCTGGCCTGGTTTATCTGGGACATGGAGCTCAGAGAAGAGGTGGTTACAGTGTCTTaGAAGTGTACCTGGGCACGG +
Preference number: 4 (lower is better)
Translates to: GSLLSLAWFIWDMELREEVVTVS*KCTWAR
Trigger: CCGTGCCCAGGTACACTTTCAAGACACTGTAACCAC...CTCTTCTCTGAGCTCCATGTCCCAGATAAACCAGGCCAGACTGAGAAGGCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR TCA 90 bp TGGCCTGGTTTATCTGGGACATGGAGCTCAGAGAAGAGGCTGCTGGGCCAGTGCGTGGTCAGATCGTTTTaGGCCAAAATCCCTTCCCTA +
Preference number: 4 (lower is better)
Translates to: WPGLSGTWSSEKRLLGQCVVRSF*AKIPSL
Trigger: TAGGGAAGGGATTTTGGCTCAAAACGATCTGACCAC...GCACTGGCCCAGCAGCCTCTTCTCTGAGCTCCATGTCCCAGATAAACCAGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR GCA 90 bp TGGGTCCTAGGTGTCACTTATCCTGGTGGACAGGGCAGAGGTGGTCAGATCGTTAGTCCAGACCTGTGGTaGGGGCAGGATTCTCACTTT +
Preference number: 4 (lower is better)
Translates to: WVLGVTYPGGQGRGGQIVSPDLW*GQDSHF
Trigger: AAAGTGAGAATCCTGCCCGCACCACAGGTCTGGACT...AACGATCTGACCACCTCTGCCCTGTCCACCAGGATAAGTGACACCTAGGACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
CDS-3UTR CCA 90 bp CCTAAAAATGGATCTGTGGAGCTCCATGAGGGAACCTCAGAGATGCACAATGACGCCAGCTTCCTTGTCTaGGGCGCTTCCCTCCACCTG +
Preference number: 4 (lower is better)
Translates to: PKNGSVELHEGTSEMHNDASFLV*GASLHL
Trigger: CAGGTGGAGGGAAGCGCCCCAGACAAGGAAGCTGGC...GTCATTGTGCATCTCTGAGGTTCCCTCATGGAGCTCCACAGATCCATTTTTAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp GGTTTATCTGGGACATGGAGCTCAGAGAAGAGGCTGCTGGGCCAGTGCCAGGGTCTCGTCCAGCCTTCTTaGACAAGGTCAGATTCAAGA +
Preference number: 4 (lower is better)
Translates to: GLSGTWSSEKRLLGQCQGLVQPS*TRSDSR
Trigger: TCTTGAATCTGACCTTGTCCAAGAAGGCTGGACGAG...ACCCTGGCACTGGCCCAGCAGCCTCTTCTCTGAGCTCCATGTCCCAGATAAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp GGTTACAGTGTCTTGAAAGTGTACCTGGGCACGGTGCGAAGGTGGTGGGAATGTAGGGACAAGCAGGTCTaGACCCAGAAGATTGGGCTG +
Preference number: 4 (lower is better)
Translates to: GYSVLKVYLGTVRRWWECRDKQV*TQKIGL
Trigger: CAGCCCAATCTTCTGGGTCCAGACCTGCTTGTCCCT...ACATTCCCACCACCTTCGCACCGTGCCCAGGTACACTTTCAAGACACTGTAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp GGGAGCCTTCTCAGTCTGGCCTGGTTTATCTGGGACATGGAGCTCAGAGAAGAGTGGACAGGGCAGAGGTaGTCAGATCGTTTTGAGCCA +
Preference number: 4 (lower is better)
Translates to: GSLLSLAWFIWDMELREEWTGQR*SDRFEP
Trigger: TGGCTCAAAACGATCTGACCACCTCTGCCCTGTCCA...CTCTTCTCTGAGCTCCATGTCCCAGATAAACCAGGCCAGACTGAGAAGGCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp GCCTGGTTTATCTGGGACATGGAGCTCAGAGAAGAGGCTGCTGGGCCAGTGCCATTCCTCAAAATCCAGTaGTCCTCAGTCAGAAGCGGA +
Preference number: 4 (lower is better)
Translates to: AWFIWDMELREEAAGPVPFLKIQ*SSVRSG
Trigger: TCCGCTTCTGACTGAGGACCACTGGATTTTGAGGAA...TGGCACTGGCCCAGCAGCCTCTTCTCTGAGCTCCATGTCCCAGATAAACCAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
CDS-3UTR CCA 90 bp GCCAGCTCAATAAATAACATCTTGTGGTTACAGTGTCTTGAAAGTGTACCTGGGGGTGGCCGGGCATGCTaGGTCCTCCCCAGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: ASSINNILWLQCLESVPGGGRAC*VLPRPP
Trigger: AGGAGGCCTGGGGAGGACCCAGCATGCCCGGCCACC...CCCAGGTACACTTTCAAGACACTGTAACCACAAGATGTTATTTATTGAGCTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372889.5
CDS-3UTR CCA 90 bp TGGGTCCTAGGTGTCACTTATCCTGGTGGACAGGGCAGAGGTGGTCAGATCGTTCCACTCTCCACTTCCTaGCAGGGACCACAAAGTCTA +
Preference number: 4 (lower is better)
Translates to: WVLGVTYPGGQGRGGQIVPLSTS*QGPQSL
Trigger: TAGACTTTGTGGTCCCTGCCAGGAAGTGGAGAGTGG...AACGATCTGACCACCTCTGCCCTGTCCACCAGGATAAGTGACACCTAGGACCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372891.7
CDS-3UTR TCA 90 bp AGCTTGTCTCCCACCCATAGTTGGGAGAAATCACAAGAACCAGGGACCATGGTGTCCGGTCACAGGAGATaGAGTCCGAGTAGGAGGACT +
Preference number: 4 (lower is better)
Translates to: SLSPTHSWEKSQEPGTMVSGHRR*SPSRRT
Trigger: AGTCCTCCTACTCGGACTTCATCTCCTGTGACCGGA...CACCATGGTCCCTGGTTCTTGTGATTTCTCCCAACTATGGGTGGGAGACAAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372887.5
CDS-3UTR GCA 90 bp TCTGTGGAGCTCCATGAGGGAACCTCAGAGATGCACAATGACAGTTTAGCTAAAAGGTGGTCCCATCGCTaGTCTGGGGCTGGTTGCCAG +
Preference number: 4 (lower is better)
Translates to: SVELHEGTSEMHNDSLAKRWSHR*SGAGCQ
Trigger: CTGGCAACCAGCCCCAGAGCAGCGATGGGACCACCT...TTTAGCTAAACTGTCATTGTGCATCTCTGAGGTTCCCTCATGGAGCTCCACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp TCTGTGGAGCTCCATGAGGGAACCTCAGAGATGCACAATGACAGTTTAGCTAAAGCCAGCTTCCTTGTCTaGGGCGCTTCCCTCCACCTG +
Preference number: 4 (lower is better)
Translates to: SVELHEGTSEMHNDSLAKASFLV*GASLHL
Trigger: CAGGTGGAGGGAAGCGCCCCAGACAAGGAAGCTGGC...TTTAGCTAAACTGTCATTGTGCATCTCTGAGGTTCCCTCATGGAGCTCCACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp GGGAGCCTTCTCAGTCTGGCCTGGTTTATCTGGGACATGGAGCTCAGAGAAGAGCTTCTCAGTCTGGCCTaGTTTATCTGGGACATGGAG +
Preference number: 4 (lower is better)
Translates to: GSLLSLAWFIWDMELREELLSLA*FIWDME
Trigger: CTCCATGTCCCAGATAAACCAGGCCAGACTGAGAAG...CTCTTCTCTGAGCTCCATGTCCCAGATAAACCAGGCCAGACTGAGAAGGCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp AGAGGCCTCTGGGGAGCCTTCTCAGTCTGGCCTGGTTTATCTGGGACATGGAGCCTAAAAATGGATCTGTaGAGCTCCATGAGGGAACCT +
Preference number: 4 (lower is better)
Translates to: RGLWGAFSVWPGLSGTWSLKMDL*SSMREP
Trigger: AGGTTCCCTCATGGAGCTCCACAGATCCATTTTTAG...GCTCCATGTCCCAGATAAACCAGGCCAGACTGAGAAGGCTCCCCAGAGGCCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp TGGCCTGGTTTATCTGGGACATGGAGCTCAGAGAAGAGGCTGCTGGGCCAGTGCCTAAAAATGGATCTGTaGAGCTCCATGAGGGAACCT +
Preference number: 4 (lower is better)
Translates to: WPGLSGTWSSEKRLLGQCLKMDL*SSMREP
Trigger: AGGTTCCCTCATGGAGCTCCACAGATCCATTTTTAG...GCACTGGCCCAGCAGCCTCTTCTCTGAGCTCCATGTCCCAGATAAACCAGGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp GTGTCTTTGTTGGGTCTTAAGGCTTGGAACTGGAATCCCCCTGGGCCAGGCGTGTTCCTCAAAATCCAGTaGTCCTCAGTCAGAAGCGGA +
Preference number: 4 (lower is better)
Translates to: VSLLGLKAWNWNPPGPGVFLKIQ*SSVRSG
Trigger: TCCGCTTCTGACTGAGGACCACTGGATTTTGAGGAA...CACGCCTGGCCCAGGGGGATTCCAGTTCCAAGCCTTAAGACCCAACAAAGACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372887.5
CDS-3UTR CCA 90 bp GCCAGCTCAATAAATAACATCTTGTGGTTACAGTGTCTTGAAAGTGTACCTGGGCGGAGCCCGTTGCCTTaGCGACCTGGGCTGCCGAAC +
Preference number: 4 (lower is better)
Translates to: ASSINNILWLQCLESVPGRSPLP*RPGLPN
Trigger: GTTCGGCAGCCCAGGTCGCCAAGGCAACGGGCTCCG...CCCAGGTACACTTTCAAGACACTGTAACCACAAGATGTTATTTATTGAGCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp CCCACCCATAGTTGGGAGAAATCACAAGAACCAGGGACCATGGTGTCTCCTGAGTTGGGTCTTAAGGCTTaGAACTGGAATCCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: PTHSWEKSQEPGTMVSPELGLKA*NWNPPG
Trigger: CCCAGGGGGATTCCAGTTCCAAGCCTTAAGACCCAA...CTCAGGAGACACCATGGTCCCTGGTTCTTGTGATTTCTCCCAACTATGGGTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372887.5
CDS-3UTR CCA 90 bp TTGTTGGGTCTTAAGGCTTGGAACTGGAATCCCCCTGGGCCAGGCGTGGTGGTTAAGAACCAGGGACCATaGTGTCTCCTGAGTTCTGAA +
Preference number: 4 (lower is better)
Translates to: LLGLKAWNWNPPGPGVVVKNQGP*CLLSSE
Trigger: TTCAGAACTCAGGAGACACCATGGTCCCTGGTTCTT...AACCACCACGCCTGGCCCAGGGGGATTCCAGTTCCAAGCCTTAAGACCCAACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372887.5
CDS-3UTR TCA 90 bp AACATCTTGTGGTTACAGTGTCTTGAAAGTGTACCTGGGCACGGTGCGAAGGTGTCCGGTCACAGGAGATaGAGTCCGAGTAGGAGGACT +
Preference number: 4 (lower is better)
Translates to: NILWLQCLESVPGHGAKVSGHRR*SPSRRT
Trigger: AGTCCTCCTACTCGGACTTCATCTCCTGTGACCGGA...CACCTTCGCACCGTGCCCAGGTACACTTTCAAGACACTGTAACCACAAGATGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR TCA 90 bp CATGTCCAGGCCTACCAGGTGGGTCCTGTGAGAAGGAATGGAGAGGCTGGCCCTCAGATTTTCCACTGTTaGCTAATCAGTACGGGAATT +
Preference number: 4 (lower is better)
Translates to: HVQAYQVGPVRRNGEAGPQIFHC*LISTGI
Trigger: AATTCCCGTACTGATTAGTCAACAGTGGAAAATCTG...AGGGCCAGCCTCTCCATTCCTTCTCACAGGACCCACCTGGTAGGCCTGGACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372887.5
CDS-3UTR CCA 90 bp GCCTCTGGGGAGCCTTCTCAGTCTGGCCTGGTTTATCTGGGACATGGAGCTCAGTCGGCATTTATTTCCTaGGTCCTAGGTGTCACTTAT +
Preference number: 4 (lower is better)
Translates to: ASGEPSQSGLVYLGHGAQSAFIS*VLGVTY
Trigger: ATAAGTGACACCTAGGACCCAGGAAATAAATGCCGA...CTGAGCTCCATGTCCCAGATAAACCAGGCCAGACTGAGAAGGCTCCCCAGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp TGGCCTGGTTTATCTGGGACATGGAGCTCAGAGAAGAGGCTGCTGGGCCAGTGCTCGGCATTTATTTCCTaGGTCCTAGGTGTCACTTAT +
Preference number: 4 (lower is better)
Translates to: WPGLSGTWSSEKRLLGQCSAFIS*VLGVTY
Trigger: ATAAGTGACACCTAGGACCCAGGAAATAAATGCCGA...GCACTGGCCCAGCAGCCTCTTCTCTGAGCTCCATGTCCCAGATAAACCAGGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp GGGAGCCTTCTCAGTCTGGCCTGGTTTATCTGGGACATGGAGCTCAGAGAAGAGAAGGTTCCCAGAGAGTaGCAGTCTCTATCTTACTGG +
Preference number: 4 (lower is better)
Translates to: GSLLSLAWFIWDMELREEKVPRE*QSLSYW
Trigger: CCAGTAAGATAGAGACTGCCACTCTCTGGGAACCTT...CTCTTCTCTGAGCTCCATGTCCCAGATAAACCAGGCCAGACTGAGAAGGCTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372889.5
CDS-3UTR CCA 90 bp GCCTGGTTTATCTGGGACATGGAGCTCAGAGAAGAGGCTGCTGGGCCAGTGCCAATCGCTCCTCAGGCCTaGTTTAATTTCTTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: AWFIWDMELREEAAGPVPIAPQA*FNFFFL
Trigger: CAGGAAAAAGAAATTAAACCAGGCCTGAGGAGCGAT...TGGCACTGGCCCAGCAGCCTCTTCTCTGAGCTCCATGTCCCAGATAAACCAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372886.6
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR TCA 90 bp AACATCTTGTGGTTACAGTGTCTTGAAAGTGTACCTGGGCACGGTGCGAAGGTGGTGGTTACAGTGTCTTaGAAGTGTACCTGGGCACGG +
Preference number: 4 (lower is better)
Translates to: NILWLQCLESVPGHGAKVVVTVS*KCTWAR
Trigger: CCGTGCCCAGGTACACTTTCAAGACACTGTAACCAC...CACCTTCGCACCGTGCCCAGGTACACTTTCAAGACACTGTAACCACAAGATGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR TCA 90 bp GGTTACAGTGTCTTGAAAGTGTACCTGGGCACGGTGCGAAGGTGGTGGGAATGTGTGGTCAGATCGTTTTaGGCCAAAATCCCTTCCCTA +
Preference number: 4 (lower is better)
Translates to: GYSVLKVYLGTVRRWWECVVRSF*AKIPSL
Trigger: TAGGGAAGGGATTTTGGCTCAAAACGATCTGACCAC...ACATTCCCACCACCTTCGCACCGTGCCCAGGTACACTTTCAAGACACTGTAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR TCA 90 bp GCCTGGTTTATCTGGGACATGGAGCTCAGAGAAGAGGCTGCTGGGCCAGTGCCACAGATTTTCCACTGTTaGCTAATCAGTACGGGAATT +
Preference number: 4 (lower is better)
Translates to: AWFIWDMELREEAAGPVPQIFHC*LISTGI
Trigger: AATTCCCGTACTGATTAGTCAACAGTGGAAAATCTG...TGGCACTGGCCCAGCAGCCTCTTCTCTGAGCTCCATGTCCCAGATAAACCAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR GCA 90 bp GCCAGCTCAATAAATAACATCTTGTGGTTACAGTGTCTTGAAAGTGTACCTGGGTTCTGCCCCCTCGAGTaGCAGCTCGCCCATGTCTCC +
Preference number: 4 (lower is better)
Translates to: ASSINNILWLQCLESVPGFCPLE*QLAHVS
Trigger: GGAGACATGGGCGAGCTGGCACTCGAGGGGGCAGAA...CCCAGGTACACTTTCAAGACACTGTAACCACAAGATGTTATTTATTGAGCTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR GCA 90 bp GCCAGCTCAATAAATAACATCTTGTGGTTACAGTGTCTTGAAAGTGTACCTGGGCTCCACCTGTCCTTCTaGCCCCTCGAGTGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: ASSINNILWLQCLESVPGLHLSF*PLECQL
Trigger: GAGCTGGCACTCGAGGGGGCAGAAGGACAGGTGGAG...CCCAGGTACACTTTCAAGACACTGTAACCACAAGATGTTATTTATTGAGCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR GCA 90 bp CAAATCATCGGCATTTATTTCCTGGGTCCTAGGTGTCACTTATCCTGGTGGACATGTACCTGGGCACGGTaGGAAGGTGGTGGGAATGTG +
Preference number: 4 (lower is better)
Translates to: QIIGIYFLGPRCHLSWWTCTWAR*EGGGNV
Trigger: CACATTCCCACCACCTTCGCACCGTGCCCAGGTACA...TGTCCACCAGGATAAGTGACACCTAGGACCCAGGAAATAAATGCCGATGATTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp AACATCTTGTGGTTACAGTGTCTTGAAAGTGTACCTGGGCACGGTGCGAAGGTGGGAGCCTTCTCAGTCTaGCCTGGTTTATCTGGGACA +
Preference number: 4 (lower is better)
Translates to: NILWLQCLESVPGHGAKVGAFSV*PGLSGT
Trigger: TGTCCCAGATAAACCAGGCCAGACTGAGAAGGCTCC...CACCTTCGCACCGTGCCCAGGTACACTTTCAAGACACTGTAACCACAAGATGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp GCCAGCTCAATAAATAACATCTTGTGGTTACAGTGTCTTGAAAGTGTACCTGGGGGCCACAGAGGCCTCTaGGGAGCCTTCTCAGTCTGG +
Preference number: 4 (lower is better)
Translates to: ASSINNILWLQCLESVPGGHRGL*GAFSVW
Trigger: CCAGACTGAGAAGGCTCCCCAGAGGCCTCTGTGGCC...CCCAGGTACACTTTCAAGACACTGTAACCACAAGATGTTATTTATTGAGCTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp CAAATCATCGGCATTTATTTCCTGGGTCCTAGGTGTCACTTATCCTGGTGGACAAGGAGCGTTCCTGTGTaGGCTGCTCACTGTAGGGCA +
Preference number: 4 (lower is better)
Translates to: QIIGIYFLGPRCHLSWWTRSVPV*AAHCRA
Trigger: TGCCCTACAGTGAGCAGCCCACACAGGAACGCTCCT...TGTCCACCAGGATAAGTGACACCTAGGACCCAGGAAATAAATGCCGATGATTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp GCCAGCTCAATAAATAACATCTTGTGGTTACAGTGTCTTGAAAGTGTACCTGGGAGGAGGTGTTGGTGTTaGGACAGGGTCCCTGCCCGG +
Preference number: 4 (lower is better)
Translates to: ASSINNILWLQCLESVPGRRCWC*DRVPAR
Trigger: CCGGGCAGGGACCCTGTCCCAACACCAACACCTCCT...CCCAGGTACACTTTCAAGACACTGTAACCACAAGATGTTATTTATTGAGCTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp CCTAAAAATGGATCTGTGGAGCTCCATGAGGGAACCTCAGAGATGCACAATGACAGGGACAAGCAGGTCTaGACCCAGAAGATTGGGCTG +
Preference number: 4 (lower is better)
Translates to: PKNGSVELHEGTSEMHNDRDKQV*TQKIGL
Trigger: CAGCCCAATCTTCTGGGTCCAGACCTGCTTGTCCCT...GTCATTGTGCATCTCTGAGGTTCCCTCATGGAGCTCCACAGATCCATTTTTAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp GGGAGCCTTCTCAGTCTGGCCTGGTTTATCTGGGACATGGAGCTCAGAGAAGAGCTAAAAATGGATCTGTaGAGCTCCATGAGGGAACCT +
Preference number: 4 (lower is better)
Translates to: GSLLSLAWFIWDMELREELKMDL*SSMREP
Trigger: AGGTTCCCTCATGGAGCTCCACAGATCCATTTTTAG...CTCTTCTCTGAGCTCCATGTCCCAGATAAACCAGGCCAGACTGAGAAGGCTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp AACATCTTGTGGTTACAGTGTCTTGAAAGTGTACCTGGGCACGGTGCGAAGGTGTGGACAGGGCAGAGGTaGTCAGATCGTTTTGAGCCA +
Preference number: 4 (lower is better)
Translates to: NILWLQCLESVPGHGAKVWTGQR*SDRFEP
Trigger: TGGCTCAAAACGATCTGACCACCTCTGCCCTGTCCA...CACCTTCGCACCGTGCCCAGGTACACTTTCAAGACACTGTAACCACAAGATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp CTCAGTCTGGCCTGGTTTATCTGGGACATGGAGCTCAGAGAAGAGGCTGCTGGGTCGGCATTTATTTCCTaGGTCCTAGGTGTCACTTAT +
Preference number: 4 (lower is better)
Translates to: LSLAWFIWDMELREEAAGSAFIS*VLGVTY
Trigger: ATAAGTGACACCTAGGACCCAGGAAATAAATGCCGA...CCCAGCAGCCTCTTCTCTGAGCTCCATGTCCCAGATAAACCAGGCCAGACTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
3UTR CAA 72 bp CGCCCAAGTCCCGGCGCCAGCTCAATAAATAACATCTaGTGGTTACAGTGTCTTGAAAGTGTACCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: RPSPGASSINNI*WLQCLESVPGH
Trigger: GTGCCCAGGTACACTTTCAAGACACTGTAACCACAAGATGTTATTTATTGAGCTGGCGCCGGGACTTGGGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR TCA 90 bp CTCAGTCTGGCCTGGTTTATCTGGGACATGGAGCTCAGAGAAGAGGCTGCTGGGCAGATTTTCCACTGTTaGCTAATCAGTACGGGAATT +
Preference number: 4 (lower is better)
Translates to: LSLAWFIWDMELREEAAGQIFHC*LISTGI
Trigger: AATTCCCGTACTGATTAGTCAACAGTGGAAAATCTG...CCCAGCAGCCTCTTCTCTGAGCTCCATGTCCCAGATAAACCAGGCCAGACTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR TCA 90 bp AGCTTGTCTCCCACCCATAGTTGGGAGAAATCACAAGAACCAGGGACCATGGTGGTGTCTCCTGAGTTCTaGAGTGTGTCTTTGTTGGGT +
Preference number: 4 (lower is better)
Translates to: SLSPTHSWEKSQEPGTMVVSPEF*SVSLLG
Trigger: ACCCAACAAAGACACACTTCAGAACTCAGGAGACAC...CACCATGGTCCCTGGTTCTTGTGATTTCTCCCAACTATGGGTGGGAGACAAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372887.5
CDS-3UTR CCA 90 bp CAAATCATCGGCATTTATTTCCTGGGTCCTAGGTGTCACTTATCCTGGTGGACAAGATTCAAGACGAGGTaGTCCCATCGCTGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: QIIGIYFLGPRCHLSWWTRFKTR*SHRCSG
Trigger: CCCAGAGCAGCGATGGGACCACCTCGTCTTGAATCT...TGTCCACCAGGATAAGTGACACCTAGGACCCAGGAAATAAATGCCGATGATTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp AACATCTTGTGGTTACAGTGTCTTGAAAGTGTACCTGGGCACGGTGCGAAGGTGCTTCTCAGTCTGGCCTaGTTTATCTGGGACATGGAG +
Preference number: 4 (lower is better)
Translates to: NILWLQCLESVPGHGAKVLLSLA*FIWDME
Trigger: CTCCATGTCCCAGATAAACCAGGCCAGACTGAGAAG...CACCTTCGCACCGTGCCCAGGTACACTTTCAAGACACTGTAACCACAAGATGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp CAAATCATCGGCATTTATTTCCTGGGTCCTAGGTGTCACTTATCCTGGTGGACAAGGTGTCACTTATCCTaGTGGACAGGGCAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: QIIGIYFLGPRCHLSWWTRCHLS*WTGQRW
Trigger: CCACCTCTGCCCTGTCCACCAGGATAAGTGACACCT...TGTCCACCAGGATAAGTGACACCTAGGACCCAGGAAATAAATGCCGATGATTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp GGGAGCCTTCTCAGTCTGGCCTGGTTTATCTGGGACATGGAGCTCAGAGAAGAGATCGCTCCTCAGGCCTaGTTTAATTTCTTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: GSLLSLAWFIWDMELREEIAPQA*FNFFFL
Trigger: CAGGAAAAAGAAATTAAACCAGGCCTGAGGAGCGAT...CTCTTCTCTGAGCTCCATGTCCCAGATAAACCAGGCCAGACTGAGAAGGCTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372886.6
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp AATCACAAGAACCAGGGACCATGGTGTCTCCTGAGTTCTGAAGTGTGTCTTTGTAAGGAATGGAGAGGCTaGCCCTGGGTGAGCTTGTCT +
Preference number: 4 (lower is better)
Translates to: NHKNQGPWCLLSSEVCLCKEWRG*PWVSLS
Trigger: AGACAAGCTCACCCAGGGCCAGCCTCTCCATTCCTT...ACAAAGACACACTTCAGAACTCAGGAGACACCATGGTCCCTGGTTCTTGTGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372887.5
CDS-3UTR TCA 90 bp CACAAGAACCAGGGACCATGGTGTCTCCTGAGTTCTGAAGTGTGTCTTTGTTGGGACCATGGTGTCTCCTaGGTTCTGAAGTGTGTCTTT +
Preference number: 4 (lower is better)
Translates to: HKNQGPWCLLSSEVCLCWDHGVS*VLKCVF
Trigger: AAAGACACACTTCAGAACTCAGGAGACACCATGGTC...CCAACAAAGACACACTTCAGAACTCAGGAGACACCATGGTCCCTGGTTCTTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372887.5
CDS-3UTR GCA 90 bp TCTGTGGAGCTCCATGAGGGAACCTCAGAGATGCACAATGACAGTTTAGCTAAAAGTCCAGACCTGTGGTaGGGGCAGGATTCTCACTTT +
Preference number: 4 (lower is better)
Translates to: SVELHEGTSEMHNDSLAKSPDLW*GQDSHF
Trigger: AAAGTGAGAATCCTGCCCGCACCACAGGTCTGGACT...TTTAGCTAAACTGTCATTGTGCATCTCTGAGGTTCCCTCATGGAGCTCCACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
CDS-3UTR CCA 90 bp TCTGTGGAGCTCCATGAGGGAACCTCAGAGATGCACAATGACAGTTTAGCTAAAGGAGCCTTCTCAGTCTaGCCTGGTTTATCTGGGACA +
Preference number: 4 (lower is better)
Translates to: SVELHEGTSEMHNDSLAKGAFSV*PGLSGT
Trigger: TGTCCCAGATAAACCAGGCCAGACTGAGAAGGCTCC...TTTAGCTAAACTGTCATTGTGCATCTCTGAGGTTCCCTCATGGAGCTCCACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp AACATCTTGTGGTTACAGTGTCTTGAAAGTGTACCTGGGCACGGTGCGAAGGTGTTCCTCAAAATCCAGTaGTCCTCAGTCAGAAGCGGA +
Preference number: 4 (lower is better)
Translates to: NILWLQCLESVPGHGAKVFLKIQ*SSVRSG
Trigger: TCCGCTTCTGACTGAGGACCACTGGATTTTGAGGAA...CACCTTCGCACCGTGCCCAGGTACACTTTCAAGACACTGTAACCACAAGATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
CDS-3UTR CCA 90 bp CCCACCCATAGTTGGGAGAAATCACAAGAACCAGGGACCATGGTGTCTCCTGAGATCGCTCCTCAGGCCTaGTTTAATTTCTTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: PTHSWEKSQEPGTMVSPEIAPQA*FNFFFL
Trigger: CAGGAAAAAGAAATTAAACCAGGCCTGAGGAGCGAT...CTCAGGAGACACCATGGTCCCTGGTTCTTGTGATTTCTCCCAACTATGGGTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372887.5
CDS-3UTR CCA 90 bp GGTTACAGTGTCTTGAAAGTGTACCTGGGCACGGTGCGAAGGTGGTGGGAATGTATCGCTCCTCAGGCCTaGTTTAATTTCTTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: GYSVLKVYLGTVRRWWECIAPQA*FNFFFL
Trigger: CAGGAAAAAGAAATTAAACCAGGCCTGAGGAGCGAT...ACATTCCCACCACCTTCGCACCGTGCCCAGGTACACTTTCAAGACACTGTAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372886.6
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR TCA 90 bp GGTTACAGTGTCTTGAAAGTGTACCTGGGCACGGTGCGAAGGTGGTGGGAATGTCAGATTTTCCACTGTTaGCTAATCAGTACGGGAATT +
Preference number: 4 (lower is better)
Translates to: GYSVLKVYLGTVRRWWECQIFHC*LISTGI
Trigger: AATTCCCGTACTGATTAGTCAACAGTGGAAAATCTG...ACATTCCCACCACCTTCGCACCGTGCCCAGGTACACTTTCAAGACACTGTAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR GCA 90 bp CAAATCATCGGCATTTATTTCCTGGGTCCTAGGTGTCACTTATCCTGGTGGACAAGTCCAGATGCATTCTaGAGAGAGGACAGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: QIIGIYFLGPRCHLSWWTSPDAF*REDSSS
Trigger: ACTGGAGCTGTCCTCTCTGCAGAATGCATCTGGACT...TGTCCACCAGGATAAGTGACACCTAGGACCCAGGAAATAAATGCCGATGATTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349959.3
CDS-3UTR GCA 90 bp GCCAGCTCAATAAATAACATCTTGTGGTTACAGTGTCTTGAAAGTGTACCTGGGACTCGACCTCCATCATaGCTGTCGCATCGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: ASSINNILWLQCLESVPGTRPPS*LSHRSS
Trigger: TGAGGAGCGATGCGACAGGCATGATGGAGGTCGAGT...CCCAGGTACACTTTCAAGACACTGTAACCACAAGATGTTATTTATTGAGCTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp CAAATCATCGGCATTTATTTCCTGGGTCCTAGGTGTCACTTATCCTGGTGGACACTTCTCAGTCTGGCCTaGTTTATCTGGGACATGGAG +
Preference number: 4 (lower is better)
Translates to: QIIGIYFLGPRCHLSWWTLLSLA*FIWDME
Trigger: CTCCATGTCCCAGATAAACCAGGCCAGACTGAGAAG...TGTCCACCAGGATAAGTGACACCTAGGACCCAGGAAATAAATGCCGATGATTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp CCTAAAAATGGATCTGTGGAGCTCCATGAGGGAACCTCAGAGATGCACAATGACTTCCTCAAAATCCAGTaGTCCTCAGTCAGAAGCGGA +
Preference number: 4 (lower is better)
Translates to: PKNGSVELHEGTSEMHNDFLKIQ*SSVRSG
Trigger: TCCGCTTCTGACTGAGGACCACTGGATTTTGAGGAA...GTCATTGTGCATCTCTGAGGTTCCCTCATGGAGCTCCACAGATCCATTTTTAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
CDS-3UTR CCA 90 bp TCTGTGGAGCTCCATGAGGGAACCTCAGAGATGCACAATGACAGTTTAGCTAAAGCCAGGGCTAGGGACTaGAATTGTGACACAAACTCT +
Preference number: 4 (lower is better)
Translates to: SVELHEGTSEMHNDSLAKARARD*NCDTNS
Trigger: AGAGTTTGTGTCACAATTCCAGTCCCTAGCCCTGGC...TTTAGCTAAACTGTCATTGTGCATCTCTGAGGTTCCCTCATGGAGCTCCACAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372889.5
CDS-3UTR CCA 90 bp TCTGTGGAGCTCCATGAGGGAACCTCAGAGATGCACAATGACAGTTTAGCTAAAGCAGCTATATCCTACTaGCAGGGCGGTGTTACTACT +
Preference number: 4 (lower is better)
Translates to: SVELHEGTSEMHNDSLAKAAISY*QGGVTT
Trigger: AGTAGTAACACCGCCCTGCCAGTAGGATATAGCTGC...TTTAGCTAAACTGTCATTGTGCATCTCTGAGGTTCCCTCATGGAGCTCCACAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372889.5
CDS-3UTR CCA 90 bp CACAAGAACCAGGGACCATGGTGTCTCCTGAGTTCTGAAGTGTGTCTTTGTTGGTCTCCCACCCATAGTTaGGAGAAATCACAAGAACCA +
Preference number: 4 (lower is better)
Translates to: HKNQGPWCLLSSEVCLCWSPTHS*EKSQEP
Trigger: TGGTTCTTGTGATTTCTCCCAACTATGGGTGGGAGA...CCAACAAAGACACACTTCAGAACTCAGGAGACACCATGGTCCCTGGTTCTTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372887.5
CDS-3UTR TCA 90 bp GCCAGCTCAATAAATAACATCTTGTGGTTACAGTGTCTTGAAAGTGTACCTGGGGTGGTTACAGTGTCTTaGAAGTGTACCTGGGCACGG +
Preference number: 4 (lower is better)
Translates to: ASSINNILWLQCLESVPGVVTVS*KCTWAR
Trigger: CCGTGCCCAGGTACACTTTCAAGACACTGTAACCAC...CCCAGGTACACTTTCAAGACACTGTAACCACAAGATGTTATTTATTGAGCTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp CAAATCATCGGCATTTATTTCCTGGGTCCTAGGTGTCACTTATCCTGGTGGACACTCGTCCAGCCTTCTTaGACAAGGTCAGATTCAAGA +
Preference number: 4 (lower is better)
Translates to: QIIGIYFLGPRCHLSWWTLVQPS*TRSDSR
Trigger: TCTTGAATCTGACCTTGTCCAAGAAGGCTGGACGAG...TGTCCACCAGGATAAGTGACACCTAGGACCCAGGAAATAAATGCCGATGATTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp GCCAGCTCAATAAATAACATCTTGTGGTTACAGTGTCTTGAAAGTGTACCTGGGCCCAGAAGATTGGGCTaGAGAGGAGGTGTTGGTGTT +
Preference number: 4 (lower is better)
Translates to: ASSINNILWLQCLESVPGPRRLG*RGGVGV
Trigger: AACACCAACACCTCCTCTCCAGCCCAATCTTCTGGG...CCCAGGTACACTTTCAAGACACTGTAACCACAAGATGTTATTTATTGAGCTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR GCA 90 bp GCCAGCTCAATAAATAACATCTTGTGGTTACAGTGTCTTGAAAGTGTACCTGGGAGAGGTAAGTCCAGATaGATTCTGCAGAGAGGACAG +
Preference number: 4 (lower is better)
Translates to: ASSINNILWLQCLESVPGRGKSR*ILQRGQ
Trigger: CTGTCCTCTCTGCAGAATGCATCTGGACTTACCTCT...CCCAGGTACACTTTCAAGACACTGTAACCACAAGATGTTATTTATTGAGCTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349959.3
CDS-3UTR TCA 90 bp CAAATCATCGGCATTTATTTCCTGGGTCCTAGGTGTCACTTATCCTGGTGGACACAGATTTTCCACTGTTaGCTAATCAGTACGGGAATT +
Preference number: 4 (lower is better)
Translates to: QIIGIYFLGPRCHLSWWTQIFHC*LISTGI
Trigger: AATTCCCGTACTGATTAGTCAACAGTGGAAAATCTG...TGTCCACCAGGATAAGTGACACCTAGGACCCAGGAAATAAATGCCGATGATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CCA 90 bp GCCAGCTCAATAAATAACATCTTGTGGTTACAGTGTCTTGAAAGTGTACCTGGGTCGGCATTTATTTCCTaGGTCCTAGGTGTCACTTAT +
Preference number: 4 (lower is better)
Translates to: ASSINNILWLQCLESVPGSAFIS*VLGVTY
Trigger: ATAAGTGACACCTAGGACCCAGGAAATAAATGCCGA...CCCAGGTACACTTTCAAGACACTGTAACCACAAGATGTTATTTATTGAGCTGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS CCA 90 bp GCCCGCAGCCCGCAACCCGCAGCGGAGCCCGTTGCCTTGGCGACCTaGGCTGCCGAACTCCCGCGGCACTCGCGCTACGGCGGCTCGGAT +
Preference number: 5 (lower is better)
Translates to: ARSPQPAAEPVALAT*AAELPRHSRYGGSD
Trigger: ATCCGAGCCGCCGTAGCGCGAGTGCCGCGGGAGTTCGGCAGCCCAGGTCGCCAAGGCAACGGGCTCCGCTGCGGGTTGCGGGCTGCGGGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS CCA 90 bp AGCCTAGCGCCCGCAGCCCGCAACCCGCAGCGGAGCCCGTTGCCTTaGCGACCTGGGCTGCCGAACTCCCGCGGCACTCGCGCTACGGCG +
Preference number: 5 (lower is better)
Translates to: SLAPAARNPQRSPLP*RPGLPNSRGTRATA
Trigger: CGCCGTAGCGCGAGTGCCGCGGGAGTTCGGCAGCCCAGGTCGCCAAGGCAACGGGCTCCGCTGCGGGTTGCGGGCTGCGGGCGCTAGGCT
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS GCA 90 bp CAGCCCGCAACCCGCAGCGGAGCCCGTTGCCTTGGCGACCTGGGCTaGCGAACTCCCGCGGCACTCGCGCTACGGCGGCTCGGATGGGAC +
Preference number: 5 (lower is better)
Translates to: QPATRSGARCLGDLG*RTPAALALRRLGWD
Trigger: GTCCCATCCGAGCCGCCGTAGCGCGAGTGCCGCGGGAGTTCGGCAGCCCAGGTCGCCAAGGCAACGGGCTCCGCTGCGGGTTGCGGGCTG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CAA 90 bp GTTGGTGTTGGGACAGGGTCCCTGCCCGGGCCGCTCGCGAGAGGAGCGTTCCTGCCGCAGCGGAGCCCGTaGCCTTGGCGACCTGGGCTG +
Preference number: 5 (lower is better)
Translates to: VGVGTGSLPGPLARGAFLPQRSP*PWRPGL
Trigger: CAGCCCAGGTCGCCAAGGCAACGGGCTCCGCTGCGG...CAGGAACGCTCCTCTCGCGAGCGGCCCGGGCAGGGACCCTGTCCCAACACCAAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CAA 90 bp TCCCTGCCCGGGCCGCTCGCGAGAGGAGCGTTCCTGTGTGGGCTGCTCACTGTACCGCAGCGGAGCCCGTaGCCTTGGCGACCTGGGCTG +
Preference number: 5 (lower is better)
Translates to: SLPGPLARGAFLCGLLTVPQRSP*PWRPGL
Trigger: CAGCCCAGGTCGCCAAGGCAACGGGCTCCGCTGCGG...TACAGTGAGCAGCCCACACAGGAACGCTCCTCTCGCGAGCGGCCCGGGCAGGGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CAA 90 bp TGTTGGGACAGGGTCCCTGCCCGGGCCGCTCGCGAGAGGAGCGTTCCTGTGTGGGAGGAGGTGTTGGTGTaGGGACAGGGTCCCTGCCCG +
Preference number: 5 (lower is better)
Translates to: CWDRVPARAARERSVPVWEEVLV*GQGPCP
Trigger: CGGGCAGGGACCCTGTCCCAACACCAACACCTCCTC...CCACACAGGAACGCTCCTCTCGCGAGCGGCCCGGGCAGGGACCCTGTCCCAACA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CAA 90 bp TCTGGGACATGGAGCTCAGAGAAGAGGCTGCTGGGCCAGTGCCAGGGTTCCCCCGCGGAGCCCGTTGCCTaGGCGACCTGGGCTGCCGAA +
Preference number: 5 (lower is better)
Translates to: SGTWSSEKRLLGQCQGSPAEPVA*ATWAAE
Trigger: TTCGGCAGCCCAGGTCGCCAAGGCAACGGGCTCCGC...GGGGGAACCCTGGCACTGGCCCAGCAGCCTCTTCTCTGAGCTCCATGTCCCAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS TCA 90 bp CAGCTCGCCCATGTCTCCAGCCAGCTTCCTCACGCTCACAGCCTCTaGGTCTCCCTGGATGTCAGGGACCGCATTCCGACGGCCTGTCCG +
Preference number: 5 (lower is better)
Translates to: QLAHVSSQLPHAHSL*VSLDVRDRIPTACP
Trigger: CGGACAGGCCGTCGGAATGCGGTCCCTGACATCCAGGGAGACTCAGAGGCTGTGAGCGTGAGGAAGCTGGCTGGAGACATGGGCGAGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372887.5
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
ENST00000477390.5
CDS GCA 90 bp GGGCCTCTGGCATGCAGTAGTGCCAAGGACCTGCTGGCTCTAACCTaGCCCCTCGAGTGCCAGCTCGCCCATGTCTCCAGCCAGCTTCCT +
Preference number: 5 (lower is better)
Translates to: GPLACSSAKDLLALT*PLECQLAHVSSQLP
Trigger: AGGAAGCTGGCTGGAGACATGGGCGAGCTGGCACTCGAGGGGGCAGGTTAGAGCCAGCAGGTCCTTGGCACTACTGCATGCCAGAGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477390.5
CDS-3UTR CAA 90 bp TGGCCTGGTTTATCTGGGACATGGAGCTCAGAGAAGAGGCTGCTGGGCCAGTGCGCGGAGCCCGTTGCCTaGGCGACCTGGGCTGCCGAA +
Preference number: 5 (lower is better)
Translates to: WPGLSGTWSSEKRLLGQCAEPVA*ATWAAE
Trigger: TTCGGCAGCCCAGGTCGCCAAGGCAACGGGCTCCGC...GCACTGGCCCAGCAGCCTCTTCTCTGAGCTCCATGTCCCAGATAAACCAGGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CAA 90 bp CTCAGTCTGGCCTGGTTTATCTGGGACATGGAGCTCAGAGAAGAGGCTGCTGGGCCGCAGCGGAGCCCGTaGCCTTGGCGACCTGGGCTG +
Preference number: 5 (lower is better)
Translates to: LSLAWFIWDMELREEAAGPQRSP*PWRPGL
Trigger: CAGCCCAGGTCGCCAAGGCAACGGGCTCCGCTGCGG...CCCAGCAGCCTCTTCTCTGAGCTCCATGTCCCAGATAAACCAGGCCAGACTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CAA 90 bp GTGTTGGTGTTGGGACAGGGTCCCTGCCCGGGCCGCTCGCGAGAGGAGCGTTCCTCTCGTCCAGCCTTCTaGGACAAGGTCAGATTCAAG +
Preference number: 5 (lower is better)
Translates to: VLVLGQGPCPGRSREERSSRPAF*DKVRFK
Trigger: CTTGAATCTGACCTTGTCCAAGAAGGCTGGACGAGA...GGAACGCTCCTCTCGCGAGCGGCCCGGGCAGGGACCCTGTCCCAACACCAACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CAA 90 bp AGCGTTCCTGTGTGGGCTGCTCACTGTAGGGCAGGCCCCGCCCAAGTCCCGGCGTGTGGTTACAGTGTCTaGAAAGTGTACCTGGGCACG +
Preference number: 5 (lower is better)
Translates to: SVPVWAAHCRAGPAQVPACGYSV*KVYLGT
Trigger: CGTGCCCAGGTACACTTTCAAGACACTGTAACCACA...CGCCGGGACTTGGGCGGGGCCTGCCCTACAGTGAGCAGCCCACACAGGAACGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CAA 90 bp GCCTGGTTTATCTGGGACATGGAGCTCAGAGAAGAGGCTGCTGGGCCAGTGCCAGAGGAGGTGTTGGTGTaGGGACAGGGTCCCTGCCCG +
Preference number: 5 (lower is better)
Translates to: AWFIWDMELREEAAGPVPEEVLV*GQGPCP
Trigger: CGGGCAGGGACCCTGTCCCAACACCAACACCTCCTC...TGGCACTGGCCCAGCAGCCTCTTCTCTGAGCTCCATGTCCCAGATAAACCAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CAA 90 bp TGGCCTGGTTTATCTGGGACATGGAGCTCAGAGAAGAGGCTGCTGGGCCAGTGCGAGGAGGTGTTGGTGTaGGGACAGGGTCCCTGCCCG +
Preference number: 5 (lower is better)
Translates to: WPGLSGTWSSEKRLLGQCEEVLV*GQGPCP
Trigger: CGGGCAGGGACCCTGTCCCAACACCAACACCTCCTC...GCACTGGCCCAGCAGCCTCTTCTCTGAGCTCCATGTCCCAGATAAACCAGGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CAA 90 bp GTGTTGGTGTTGGGACAGGGTCCCTGCCCGGGCCGCTCGCGAGAGGAGCGTTCCGGTGGTCAGATCGTTTaGAGCCAAAATCCCTTCCCT +
Preference number: 5 (lower is better)
Translates to: VLVLGQGPCPGRSREERSGGQIV*SQNPFP
Trigger: AGGGAAGGGATTTTGGCTCAAAACGATCTGACCACC...GGAACGCTCCTCTCGCGAGCGGCCCGGGCAGGGACCCTGTCCCAACACCAACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CAA 90 bp AGCGTTCCTGTGTGGGCTGCTCACTGTAGGGCAGGCCCCGCCCAAGTCCCGGCGGGTGGTCAGATCGTTTaGAGCCAAAATCCCTTCCCT +
Preference number: 5 (lower is better)
Translates to: SVPVWAAHCRAGPAQVPAGGQIV*SQNPFP
Trigger: AGGGAAGGGATTTTGGCTCAAAACGATCTGACCACC...CGCCGGGACTTGGGCGGGGCCTGCCCTACAGTGAGCAGCCCACACAGGAACGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CAA 90 bp TGTTGGGACAGGGTCCCTGCCCGGGCCGCTCGCGAGAGGAGCGTTCCTGTGTGGGGTGGTCAGATCGTTTaGAGCCAAAATCCCTTCCCT +
Preference number: 5 (lower is better)
Translates to: CWDRVPARAARERSVPVWGGQIV*SQNPFP
Trigger: AGGGAAGGGATTTTGGCTCAAAACGATCTGACCACC...CCACACAGGAACGCTCCTCTCGCGAGCGGCCCGGGCAGGGACCCTGTCCCAACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS GCA 90 bp GTCAGATTCAAGACGAGGTGGTCCCATCGCTGCTCTGGGGCTGGTTaGCAGCTTCCTTGTCTGGGGCGCTTCCCTCCACCTGTCCTTCTG +
Preference number: 5 (lower is better)
Translates to: VRFKTRWSHRCSGAG*QLPCLGRFPPPVLL
Trigger: CAGAAGGACAGGTGGAGGGAAGCGCCCCAGACAAGGAAGCTGGCAACCAGCCCCAGAGCAGCGATGGGACCACCTCGTCTTGAATCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS CCA 90 bp CAAGGTCAGATTCAAGACGAGGTGGTCCCATCGCTGCTCTGGGGCTaGTTGCCAGCTTCCTTGTCTGGGGCGCTTCCCTCCACCTGTCCT +
Preference number: 5 (lower is better)
Translates to: QGQIQDEVVPSLLWG*LPASLSGALPSTCP
Trigger: AGGACAGGTGGAGGGAAGCGCCCCAGACAAGGAAGCTGGCAACCAGCCCCAGAGCAGCGATGGGACCACCTCGTCTTGAATCTGACCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS CCA 90 bp CTTGGACAAGGTCAGATTCAAGACGAGGTGGTCCCATCGCTGCTCTaGGGCTGGTTGCCAGCTTCCTTGTCTGGGGCGCTTCCCTCCACC +
Preference number: 5 (lower is better)
Translates to: LGQGQIQDEVVPSLL*GWLPASLSGALPST
Trigger: GGTGGAGGGAAGCGCCCCAGACAAGGAAGCTGGCAACCAGCCCCAGAGCAGCGATGGGACCACCTCGTCTTGAATCTGACCTTGTCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CAA 90 bp GCCTCTGGGGAGCCTTCTCAGTCTGGCCTGGTTTATCTGGGACATGGAGCTCAGTGGTTGCCAGCTTCCTaGTCTGGGGCGCTTCCCTCC +
Preference number: 5 (lower is better)
Translates to: ASGEPSQSGLVYLGHGAQWLPAS*SGALPS
Trigger: GGAGGGAAGCGCCCCAGACAAGGAAGCTGGCAACCA...CTGAGCTCCATGTCCCAGATAAACCAGGCCAGACTGAGAAGGCTCCCCAGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CAA 90 bp CTCAGTCTGGCCTGGTTTATCTGGGACATGGAGCTCAGAGAAGAGGCTGCTGGGGAGGAGGTGTTGGTGTaGGGACAGGGTCCCTGCCCG +
Preference number: 5 (lower is better)
Translates to: LSLAWFIWDMELREEAAGEEVLV*GQGPCP
Trigger: CGGGCAGGGACCCTGTCCCAACACCAACACCTCCTC...CCCAGCAGCCTCTTCTCTGAGCTCCATGTCCCAGATAAACCAGGCCAGACTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS TCA 90 bp GGATGTCAGGGACCGCATTCCGACGGCCTGTCCGGTCACAGGAGATaGAGTCCGAGTAGGAGGACTCGACCTCCATCATGCCTGTCGCAT +
Preference number: 5 (lower is better)
Translates to: GCQGPHSDGLSGHRR*SPSRRTRPPSCLSH
Trigger: ATGCGACAGGCATGATGGAGGTCGAGTCCTCCTACTCGGACTTCATCTCCTGTGACCGGACAGGCCGTCGGAATGCGGTCCCTGACATCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372887.5
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
ENST00000477390.5
CDS GCA 90 bp GCCTTCTTGGACAAGGTCAGATTCAAGACGAGGTGGTCCCATCGCTaGTCTGGGGCTGGTTGCCAGCTTCCTTGTCTGGGGCGCTTCCCT +
Preference number: 5 (lower is better)
Translates to: AFLDKVRFKTRWSHR*SGAGCQLPCLGRFP
Trigger: AGGGAAGCGCCCCAGACAAGGAAGCTGGCAACCAGCCCCAGAGCAGCGATGGGACCACCTCGTCTTGAATCTGACCTTGTCCAAGAAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS CCA 90 bp GTTCCCCCTCTGGGAGGGGACAGAAGGTCTCTCGTCCAGCCTTCTTaGACAAGGTCAGATTCAAGACGAGGTGGTCCCATCGCTGCTCTG +
Preference number: 5 (lower is better)
Translates to: VPPLGGDRRSLVQPS*TRSDSRRGGPIAAL
Trigger: CAGAGCAGCGATGGGACCACCTCGTCTTGAATCTGACCTTGTCCAAGAAGGCTGGACGAGAGACCTTCTGTCCCCTCCCAGAGGGGGAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS CCA 90 bp GTCTCTCGTCCAGCCTTCTTGGACAAGGTCAGATTCAAGACGAGGTaGTCCCATCGCTGCTCTGGGGCTGGTTGCCAGCTTCCTTGTCTG +
Preference number: 5 (lower is better)
Translates to: VSRPAFLDKVRFKTR*SHRCSGAGCQLPCL
Trigger: CAGACAAGGAAGCTGGCAACCAGCCCCAGAGCAGCGATGGGACCACCTCGTCTTGAATCTGACCTTGTCCAAGAAGGCTGGACGAGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CAA 90 bp GGTTACAGTGTCTTGAAAGTGTACCTGGGCACGGTGCGAAGGTGGTGGGAATGTTGGTTGCCAGCTTCCTaGTCTGGGGCGCTTCCCTCC +
Preference number: 5 (lower is better)
Translates to: GYSVLKVYLGTVRRWWECWLPAS*SGALPS
Trigger: GGAGGGAAGCGCCCCAGACAAGGAAGCTGGCAACCA...ACATTCCCACCACCTTCGCACCGTGCCCAGGTACACTTTCAAGACACTGTAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CAA 90 bp GTGTTGGTGTTGGGACAGGGTCCCTGCCCGGGCCGCTCGCGAGAGGAGCGTTCCTCAGATTTTCCACTGTaGACTAATCAGTACGGGAAT +
Preference number: 5 (lower is better)
Translates to: VLVLGQGPCPGRSREERSSDFPL*TNQYGN
Trigger: ATTCCCGTACTGATTAGTCAACAGTGGAAAATCTGA...GGAACGCTCCTCTCGCGAGCGGCCCGGGCAGGGACCCTGTCCCAACACCAACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CAA 90 bp TCTGTGGAGCTCCATGAGGGAACCTCAGAGATGCACAATGACAGTTTAGCTAAAGCGGAGCCCGTTGCCTaGGCGACCTGGGCTGCCGAA +
Preference number: 5 (lower is better)
Translates to: SVELHEGTSEMHNDSLAKAEPVA*ATWAAE
Trigger: TTCGGCAGCCCAGGTCGCCAAGGCAACGGGCTCCGC...TTTAGCTAAACTGTCATTGTGCATCTCTGAGGTTCCCTCATGGAGCTCCACAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CAA 90 bp CCCACCCATAGTTGGGAGAAATCACAAGAACCAGGGACCATGGTGTCTCCTGAGTGGCCCTGGGTGAGCTaGTCTCCCACCCATAGTTGG +
Preference number: 5 (lower is better)
Translates to: PTHSWEKSQEPGTMVSPEWPWVS*SPTHSW
Trigger: CCAACTATGGGTGGGAGACAAGCTCACCCAGGGCCA...CTCAGGAGACACCATGGTCCCTGGTTCTTGTGATTTCTCCCAACTATGGGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372887.5
CDS-3UTR CAA 90 bp GGTTTATCTGGGACATGGAGCTCAGAGAAGAGGCTGCTGGGCCAGTGCCAGGGTTCTCGTCCAGCCTTCTaGGACAAGGTCAGATTCAAG +
Preference number: 5 (lower is better)
Translates to: GLSGTWSSEKRLLGQCQGSRPAF*DKVRFK
Trigger: CTTGAATCTGACCTTGTCCAAGAAGGCTGGACGAGA...ACCCTGGCACTGGCCCAGCAGCCTCTTCTCTGAGCTCCATGTCCCAGATAAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CAA 90 bp TGGCCTGGTTTATCTGGGACATGGAGCTCAGAGAAGAGGCTGCTGGGCCAGTGCTCTCGTCCAGCCTTCTaGGACAAGGTCAGATTCAAG +
Preference number: 5 (lower is better)
Translates to: WPGLSGTWSSEKRLLGQCSRPAF*DKVRFK
Trigger: CTTGAATCTGACCTTGTCCAAGAAGGCTGGACGAGA...GCACTGGCCCAGCAGCCTCTTCTCTGAGCTCCATGTCCCAGATAAACCAGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CAA 90 bp GCCTGGTTTATCTGGGACATGGAGCTCAGAGAAGAGGCTGCTGGGCCAGTGCCATGTGGTTACAGTGTCTaGAAAGTGTACCTGGGCACG +
Preference number: 5 (lower is better)
Translates to: AWFIWDMELREEAAGPVPCGYSV*KVYLGT
Trigger: CGTGCCCAGGTACACTTTCAAGACACTGTAACCACA...TGGCACTGGCCCAGCAGCCTCTTCTCTGAGCTCCATGTCCCAGATAAACCAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CAA 90 bp CCTAAAAATGGATCTGTGGAGCTCCATGAGGGAACCTCAGAGATGCACAATGACGAGGAGGTGTTGGTGTaGGGACAGGGTCCCTGCCCG +
Preference number: 5 (lower is better)
Translates to: PKNGSVELHEGTSEMHNDEEVLV*GQGPCP
Trigger: CGGGCAGGGACCCTGTCCCAACACCAACACCTCCTC...GTCATTGTGCATCTCTGAGGTTCCCTCATGGAGCTCCACAGATCCATTTTTAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CAA 90 bp GCCTCTGGGGAGCCTTCTCAGTCTGGCCTGGTTTATCTGGGACATGGAGCTCAGGGTGGTCAGATCGTTTaGAGCCAAAATCCCTTCCCT +
Preference number: 5 (lower is better)
Translates to: ASGEPSQSGLVYLGHGAQGGQIV*SQNPFP
Trigger: AGGGAAGGGATTTTGGCTCAAAACGATCTGACCACC...CTGAGCTCCATGTCCCAGATAAACCAGGCCAGACTGAGAAGGCTCCCCAGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CAA 90 bp CCTAAAAATGGATCTGTGGAGCTCCATGAGGGAACCTCAGAGATGCACAATGACTGGTTGCCAGCTTCCTaGTCTGGGGCGCTTCCCTCC +
Preference number: 5 (lower is better)
Translates to: PKNGSVELHEGTSEMHNDWLPAS*SGALPS
Trigger: GGAGGGAAGCGCCCCAGACAAGGAAGCTGGCAACCA...GTCATTGTGCATCTCTGAGGTTCCCTCATGGAGCTCCACAGATCCATTTTTAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CAA 90 bp CTCAGTCTGGCCTGGTTTATCTGGGACATGGAGCTCAGAGAAGAGGCTGCTGGGGGTGGTCAGATCGTTTaGAGCCAAAATCCCTTCCCT +
Preference number: 5 (lower is better)
Translates to: LSLAWFIWDMELREEAAGGGQIV*SQNPFP
Trigger: AGGGAAGGGATTTTGGCTCAAAACGATCTGACCACC...CCCAGCAGCCTCTTCTCTGAGCTCCATGTCCCAGATAAACCAGGCCAGACTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CAA 90 bp TCTGTGGAGCTCCATGAGGGAACCTCAGAGATGCACAATGACAGTTTAGCTAAATGGTTGCCAGCTTCCTaGTCTGGGGCGCTTCCCTCC +
Preference number: 5 (lower is better)
Translates to: SVELHEGTSEMHNDSLAKWLPAS*SGALPS
Trigger: GGAGGGAAGCGCCCCAGACAAGGAAGCTGGCAACCA...TTTAGCTAAACTGTCATTGTGCATCTCTGAGGTTCCCTCATGGAGCTCCACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CAA 90 bp TGGGTCCTAGGTGTCACTTATCCTGGTGGACAGGGCAGAGGTGGTCAGATCGTTTCTCGTCCAGCCTTCTaGGACAAGGTCAGATTCAAG +
Preference number: 5 (lower is better)
Translates to: WVLGVTYPGGQGRGGQIVSRPAF*DKVRFK
Trigger: CTTGAATCTGACCTTGTCCAAGAAGGCTGGACGAGA...AACGATCTGACCACCTCTGCCCTGTCCACCAGGATAAGTGACACCTAGGACCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CAA 90 bp GGGAGCCTTCTCAGTCTGGCCTGGTTTATCTGGGACATGGAGCTCAGAGAAGAGTGTGGTTACAGTGTCTaGAAAGTGTACCTGGGCACG +
Preference number: 5 (lower is better)
Translates to: GSLLSLAWFIWDMELREECGYSV*KVYLGT
Trigger: CGTGCCCAGGTACACTTTCAAGACACTGTAACCACA...CTCTTCTCTGAGCTCCATGTCCCAGATAAACCAGGCCAGACTGAGAAGGCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CAA 90 bp TGGGTCCTAGGTGTCACTTATCCTGGTGGACAGGGCAGAGGTGGTCAGATCGTTGGTGGTCAGATCGTTTaGAGCCAAAATCCCTTCCCT +
Preference number: 5 (lower is better)
Translates to: WVLGVTYPGGQGRGGQIVGGQIV*SQNPFP
Trigger: AGGGAAGGGATTTTGGCTCAAAACGATCTGACCACC...AACGATCTGACCACCTCTGCCCTGTCCACCAGGATAAGTGACACCTAGGACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CAA 90 bp AGAAATCACAAGAACCAGGGACCATGGTGTCTCCTGAGTTCTGAAGTGTGTCTTCCAGGAAGCAGCCTCTaGCCTGGACATGTCCAGGCC +
Preference number: 5 (lower is better)
Translates to: RNHKNQGPWCLLSSEVCLPGSSL*PGHVQA
Trigger: GGCCTGGACATGTCCAGGCAAGAGGCTGCTTCCTGG...AAGACACACTTCAGAACTCAGGAGACACCATGGTCCCTGGTTCTTGTGATTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372887.5
CDS-3UTR CAA 90 bp GCCAGCTCAATAAATAACATCTTGTGGTTACAGTGTCTTGAAAGTGTACCTGGGGAGGAGGTGTTGGTGTaGGGACAGGGTCCCTGCCCG +
Preference number: 5 (lower is better)
Translates to: ASSINNILWLQCLESVPGEEVLV*GQGPCP
Trigger: CGGGCAGGGACCCTGTCCCAACACCAACACCTCCTC...CCCAGGTACACTTTCAAGACACTGTAACCACAAGATGTTATTTATTGAGCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CAA 90 bp ACATGTCCAGGCCTACCAGGTGGGTCCTGTGAGAAGGAATGGAGAGGCTGGCCCTCAGATTTTCCACTGTaGACTAATCAGTACGGGAAT +
Preference number: 5 (lower is better)
Translates to: TCPGLPGGSCEKEWRGWPSDFPL*TNQYGN
Trigger: ATTCCCGTACTGATTAGTCAACAGTGGAAAATCTGA...GGGCCAGCCTCTCCATTCCTTCTCACAGGACCCACCTGGTAGGCCTGGACATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372887.5
CDS GCA 90 bp GAATTTAAGAAACCAGGATTCAAGGTTAGCAGTCCAGACCTGTGGTaGGGGCAGGATTCTCACTTTACCCTCCTCTCTGTCTCTTCCCCG +
Preference number: 5 (lower is better)
Translates to: EFKKPGFKVSSPDLW*GQDSHFTLLSVSSP
Trigger: CGGGGAAGAGACAGAGAGGAGGGTAAAGTGAGAATCCTGCCCGCACCACAGGTCTGGACTGCTAACCTTGAATCCTGGTTTCTTAAATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000372886.6
ENST00000372887.5
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
CDS-3UTR CAA 90 bp GCCAGCTCAATAAATAACATCTTGTGGTTACAGTGTCTTGAAAGTGTACCTGGGTGGTTGCCAGCTTCCTaGTCTGGGGCGCTTCCCTCC +
Preference number: 5 (lower is better)
Translates to: ASSINNILWLQCLESVPGWLPAS*SGALPS
Trigger: GGAGGGAAGCGCCCCAGACAAGGAAGCTGGCAACCA...CCCAGGTACACTTTCAAGACACTGTAACCACAAGATGTTATTTATTGAGCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CAA 90 bp GGTTTATCTGGGACATGGAGCTCAGAGAAGAGGCTGCTGGGCCAGTGCCAGGGTTCAGATTTTCCACTGTaGACTAATCAGTACGGGAAT +
Preference number: 5 (lower is better)
Translates to: GLSGTWSSEKRLLGQCQGSDFPL*TNQYGN
Trigger: ATTCCCGTACTGATTAGTCAACAGTGGAAAATCTGA...ACCCTGGCACTGGCCCAGCAGCCTCTTCTCTGAGCTCCATGTCCCAGATAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS CCA 90 bp GCAGAATTTAAGAAACCAGGATTCAAGGTTAGCAGTCCAGACCTGTaGTGCGGGCAGGATTCTCACTTTACCCTCCTCTCTGTCTCTTCC +
Preference number: 5 (lower is better)
Translates to: AEFKKPGFKVSSPDL*CGQDSHFTLLSVSS
Trigger: GGAAGAGACAGAGAGGAGGGTAAAGTGAGAATCCTGCCCGCACCACAGGTCTGGACTGCTAACCTTGAATCCTGGTTTCTTAAATTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372886.6
ENST00000372887.5
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
CDS-3UTR CAA 90 bp AATCACAAGAACCAGGGACCATGGTGTCTCCTGAGTTCTGAAGTGTGTCTTTGTCTTGAGCCTAGGAGTTaGAGACCAGCCAGGGCAACA +
Preference number: 5 (lower is better)
Translates to: NHKNQGPWCLLSSEVCLCLEPRS*RPARAT
Trigger: TGTTGCCCTGGCTGGTCTCAAACTCCTAGGCTCAAG...ACAAAGACACACTTCAGAACTCAGGAGACACCATGGTCCCTGGTTCTTGTGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372887.5
CDS-3UTR CAA 90 bp CCTAAAAATGGATCTGTGGAGCTCCATGAGGGAACCTCAGAGATGCACAATGACTGTGGTTACAGTGTCTaGAAAGTGTACCTGGGCACG +
Preference number: 5 (lower is better)
Translates to: PKNGSVELHEGTSEMHNDCGYSV*KVYLGT
Trigger: CGTGCCCAGGTACACTTTCAAGACACTGTAACCACA...GTCATTGTGCATCTCTGAGGTTCCCTCATGGAGCTCCACAGATCCATTTTTAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CAA 90 bp GGGAGCCTTCTCAGTCTGGCCTGGTTTATCTGGGACATGGAGCTCAGAGAAGAGTCAGATTTTCCACTGTaGACTAATCAGTACGGGAAT +
Preference number: 5 (lower is better)
Translates to: GSLLSLAWFIWDMELREESDFPL*TNQYGN
Trigger: ATTCCCGTACTGATTAGTCAACAGTGGAAAATCTGA...CTCTTCTCTGAGCTCCATGTCCCAGATAAACCAGGCCAGACTGAGAAGGCTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CAA 90 bp CAAATCATCGGCATTTATTTCCTGGGTCCTAGGTGTCACTTATCCTGGTGGACATCTCGTCCAGCCTTCTaGGACAAGGTCAGATTCAAG +
Preference number: 5 (lower is better)
Translates to: QIIGIYFLGPRCHLSWWTSRPAF*DKVRFK
Trigger: CTTGAATCTGACCTTGTCCAAGAAGGCTGGACGAGA...TGTCCACCAGGATAAGTGACACCTAGGACCCAGGAAATAAATGCCGATGATTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CAA 90 bp CAAATCATCGGCATTTATTTCCTGGGTCCTAGGTGTCACTTATCCTGGTGGACATGTGGTTACAGTGTCTaGAAAGTGTACCTGGGCACG +
Preference number: 5 (lower is better)
Translates to: QIIGIYFLGPRCHLSWWTCGYSV*KVYLGT
Trigger: CGTGCCCAGGTACACTTTCAAGACACTGTAACCACA...TGTCCACCAGGATAAGTGACACCTAGGACCCAGGAAATAAATGCCGATGATTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CAA 90 bp GCCAGCTCAATAAATAACATCTTGTGGTTACAGTGTCTTGAAAGTGTACCTGGGTCTCGTCCAGCCTTCTaGGACAAGGTCAGATTCAAG +
Preference number: 5 (lower is better)
Translates to: ASSINNILWLQCLESVPGSRPAF*DKVRFK
Trigger: CTTGAATCTGACCTTGTCCAAGAAGGCTGGACGAGA...CCCAGGTACACTTTCAAGACACTGTAACCACAAGATGTTATTTATTGAGCTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CAA 90 bp AACATCTTGTGGTTACAGTGTCTTGAAAGTGTACCTGGGCACGGTGCGAAGGTGTCAGATTTTCCACTGTaGACTAATCAGTACGGGAAT +
Preference number: 5 (lower is better)
Translates to: NILWLQCLESVPGHGAKVSDFPL*TNQYGN
Trigger: ATTCCCGTACTGATTAGTCAACAGTGGAAAATCTGA...CACCTTCGCACCGTGCCCAGGTACACTTTCAAGACACTGTAACCACAAGATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS-3UTR CAA 90 bp CAAATCATCGGCATTTATTTCCTGGGTCCTAGGTGTCACTTATCCTGGTGGACATCAGATTTTCCACTGTaGACTAATCAGTACGGGAAT +
Preference number: 5 (lower is better)
Translates to: QIIGIYFLGPRCHLSWWTSDFPL*TNQYGN
Trigger: ATTCCCGTACTGATTAGTCAACAGTGGAAAATCTGA...TGTCCACCAGGATAAGTGACACCTAGGACCCAGGAAATAAATGCCGATGATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS TCA 90 bp GGAGAGGCAGTTTTGACTTCAGATGCTCATTCCAATTCCTTTGGGTaGAAAGAGAGTAATTCCTCACAATCCCATACCCTAAGAGATGAT +
Preference number: 5 (lower is better)
Translates to: GEAVLTSDAHSNSFG*KESNSSQSHTLRDD
Trigger: ATCATCTCTTAGGGTATGGGATTGTGAGGAATTACTCTCTTTTCACCCAAAGGAATTGGAATGAGCATCTGAAGTCAAAACTGCCTCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477390.5
CDS CAA 90 bp CAGCCTAGCGCCCGCAGCCCGCAACCCGCAGCGGAGCCCGTTGCCTaGGCGACCTGGGCTGCCGAACTCCCGCGGCACTCGCGCTACGGC +
Preference number: 6 (lower is better)
Translates to: QPSARSPQPAAEPVA*ATWAAELPRHSRYG
Trigger: GCCGTAGCGCGAGTGCCGCGGGAGTTCGGCAGCCCAGGTCGCCAAGGCAACGGGCTCCGCTGCGGGTTGCGGGCTGCGGGCGCTAGGCTG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS CCA 72 bp CCCGCAGCCCGCAACCCGCAGCGGAGCCCGTTGCCTTaGCGACCTGGGCTGCCGAACTCCCGCGGCACTCGC +
Preference number: 6 (lower is better)
Translates to: PAARNPQRSPLP*RPGLPNSRGTR
Trigger: GCGAGTGCCGCGGGAGTTCGGCAGCCCAGGTCGCCAAGGCAACGGGCTCCGCTGCGGGTTGCGGGCTGCGGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS CAA 72 bp GCCCGCAGCCCGCAACCCGCAGCGGAGCCCGTTGCCTaGGCGACCTGGGCTGCCGAACTCCCGCGGCACTCG +
Preference number: 6 (lower is better)
Translates to: ARSPQPAAEPVA*ATWAAELPRHS
Trigger: CGAGTGCCGCGGGAGTTCGGCAGCCCAGGTCGCCAAGGCAACGGGCTCCGCTGCGGGTTGCGGGCTGCGGGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS GCA 72 bp ACCCGCAGCGGAGCCCGTTGCCTTGGCGACCTGGGCTaGCGAACTCCCGCGGCACTCGCGCTACGGCGGCTC +
Preference number: 6 (lower is better)
Translates to: TRSGARCLGDLG*RTPAALALRRL
Trigger: GAGCCGCCGTAGCGCGAGTGCCGCGGGAGTTCGGCAGCCCAGGTCGCCAAGGCAACGGGCTCCGCTGCGGGT
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS GCA 72 bp TCAGTACGGGAATTCTGCGGTCTCGCCGCCTCTCCGTaGCTGGGCCGCCGGTCCGCAGCGCCTCCCCGGGGC +
Preference number: 6 (lower is better)
Translates to: SVREFCGLAASP*LGRRSAAPPRG
Trigger: GCCCCGGGGAGGCGCTGCGGACCGGCGGCCCAGGCACGGAGAGGCGGCGAGACCGCAGAATTCCCGTACTGA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372894.7
CDS CCA 72 bp CCGCAACCCGCAGCGGAGCCCGTTGCCTTGGCGACCTaGGCTGCCGAACTCCCGCGGCACTCGCGCTACGGC +
Preference number: 6 (lower is better)
Translates to: PQPAAEPVALAT*AAELPRHSRYG
Trigger: GCCGTAGCGCGAGTGCCGCGGGAGTTCGGCAGCCCAGGTCGCCAAGGCAACGGGCTCCGCTGCGGGTTGCGG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS CCA 72 bp CGAACTCCCGCGGCACTCGCGCTACGGCGGCTCGGATaGGACCAGGACGGTTCGCGTCCCCTTCCGCAGCCG +
Preference number: 6 (lower is better)
Translates to: RTPAALALRRLG*DQDGSRPLPQP
Trigger: CGGCTGCGGAAGGGGACGCGAACCGTCCTGGTCCCATCCGAGCCGCCGTAGCGCGAGTGCCGCGGGAGTTCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS GCA 72 bp AAGACGAGGTGGTCCCATCGCTGCTCTGGGGCTGGTTaGCAGCTTCCTTGTCTGGGGCGCTTCCCTCCACCT +
Preference number: 6 (lower is better)
Translates to: KTRWSHRCSGAG*QLPCLGRFPPP
Trigger: AGGTGGAGGGAAGCGCCCCAGACAAGGAAGCTGGCAACCAGCCCCAGAGCAGCGATGGGACCACCTCGTCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS GCA 72 bp GCATGCAGTAGTGCCAAGGACCTGCTGGCTCTAACCTaGCCCCTCGAGTGCCAGCTCGCCCATGTCTCCAGC +
Preference number: 6 (lower is better)
Translates to: ACSSAKDLLALT*PLECQLAHVSS
Trigger: GCTGGAGACATGGGCGAGCTGGCACTCGAGGGGGCAGGTTAGAGCCAGCAGGTCCTTGGCACTACTGCATGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477390.5
CDS CCA 72 bp ATTCAAGACGAGGTGGTCCCATCGCTGCTCTGGGGCTaGTTGCCAGCTTCCTTGTCTGGGGCGCTTCCCTCC +
Preference number: 6 (lower is better)
Translates to: IQDEVVPSLLWG*LPASLSGALPS
Trigger: GGAGGGAAGCGCCCCAGACAAGGAAGCTGGCAACCAGCCCCAGAGCAGCGATGGGACCACCTCGTCTTGAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS TCA 72 bp GGACCGCATTCCGACGGCCTGTCCGGTCACAGGAGATaGAGTCCGAGTAGGAGGACTCGACCTCCATCATGC +
Preference number: 6 (lower is better)
Translates to: GPHSDGLSGHRR*SPSRRTRPPSC
Trigger: GCATGATGGAGGTCGAGTCCTCCTACTCGGACTTCATCTCCTGTGACCGGACAGGCCGTCGGAATGCGGTCC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372887.5
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
ENST00000477390.5
CDS GCA 72 bp GACAAGGTCAGATTCAAGACGAGGTGGTCCCATCGCTaGTCTGGGGCTGGTTGCCAGCTTCCTTGTCTGGGG +
Preference number: 6 (lower is better)
Translates to: DKVRFKTRWSHR*SGAGCQLPCLG
Trigger: CCCCAGACAAGGAAGCTGGCAACCAGCCCCAGAGCAGCGATGGGACCACCTCGTCTTGAATCTGACCTTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS CAA 90 bp GGTTCCCCCTCTGGGAGGGGACAGAAGGTCTCTCGTCCAGCCTTCTaGGACAAGGTCAGATTCAAGACGAGGTGGTCCCATCGCTGCTCT +
Preference number: 6 (lower is better)
Translates to: GSPSGRGQKVSRPAF*DKVRFKTRWSHRCS
Trigger: AGAGCAGCGATGGGACCACCTCGTCTTGAATCTGACCTTGTCCAAGAAGGCTGGACGAGAGACCTTCTGTCCCCTCCCAGAGGGGGAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS CCA 72 bp CCAGCCTTCTTGGACAAGGTCAGATTCAAGACGAGGTaGTCCCATCGCTGCTCTGGGGCTGGTTGCCAGCTT +
Preference number: 6 (lower is better)
Translates to: PAFLDKVRFKTR*SHRCSGAGCQL
Trigger: AAGCTGGCAACCAGCCCCAGAGCAGCGATGGGACCACCTCGTCTTGAATCTGACCTTGTCCAAGAAGGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000349959.3
ENST00000372886.6
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
ENST00000372894.7
CDS CCA 72 bp ATCGCTCCTCAGGCCTCCTCAGCAGCTATATCCTACTaGCAGGGCGGTGTTACTACTTCACACAGGGCCAGG +
Preference number: 6 (lower is better)
Translates to: IAPQASSAAISY*QGGVTTSHRAR
Trigger: CCTGGCCCTGTGTGAAGTAGTAACACCGCCCTGCCAGTAGGATATAGCTGCTGAGGAGGCCTGAGGAGCGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372889.5
CDS GCA 72 bp AAACCAGGATTCAAGGTTAGCAGTCCAGACCTGTGGTaGGGGCAGGATTCTCACTTTACCCTCCTCTCTGTC +
Preference number: 6 (lower is better)
Translates to: KPGFKVSSPDLW*GQDSHFTLLSV
Trigger: GACAGAGAGGAGGGTAAAGTGAGAATCCTGCCCGCACCACAGGTCTGGACTGCTAACCTTGAATCCTGGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372886.6
ENST00000372887.5
ENST00000372889.5
ENST00000372891.7
ENST00000372892.7
CDS CCA 72 bp AGTGTGAGGCATTCCACATTTCCACTCTCCACTTCCTaGCAGGGACCACAAAGTCTAGGTACCTTCCTTCCA +
Preference number: 6 (lower is better)
Translates to: SVRHSTFPLSTS*QGPQSLGTFLP
Trigger: TGGAAGGAAGGTACCTAGACTTTGTGGTCCCTGCCAGGAAGTGGAGAGTGGAAATGTGGAATGCCTCACACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372891.7