RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PKHD1 (Homo sapiens)

Ensembl gene IDs: ENSG00000170927

Ensembl transcript IDs: ENST00000340994.4, ENST00000371117.8

Found 1348 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ACTCCCCCATATCTGCTACTGGAACTTCCATTCCCAAAGATATCCTaGCTACGGACAATGGTGTCACTGTTGACACCCTCTCCACAGTCC +
Preference number: 1 (lower is better)
Translates to: TPPYLLLELPFPKIS*LRTMVSLLTPSPQS
Trigger: GGACTGTGGAGAGGGTGTCAACAGTGACACCATTGTCCGTAGTCAGGATATCTTTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
3UTR GCA 90 bp CTTTCCATTTGGTCCATGCTCCAACCCATTCTTCACCCTGCTTCCTaGTGCCTCATTAATCTTTCAAAGTTCAGCTTCCTGCAGGCTCCT +
Preference number: 1 (lower is better)
Translates to: LSIWSMLQPILHPAS*CLINLSKFSFLQAP
Trigger: AGGAGCCTGCAGGAAGCTGAACTTTGAAAGATTAATGAGGCAGCAGGAAGCAGGGTGAAGAATGGGTTGGAGCATGGACCAAATGGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
3UTR GCA 90 bp CTGCCAATTCTTAGTAGGGTGAGACACACCTGCCCCTTGATGCCCTaGAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATT +
Preference number: 1 (lower is better)
Translates to: LPILSRVRHTCPLMP*RHNSCLPVLLIELI
Trigger: AATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGGCATCAAGGGGCAGGTGTGTCTCACCCTACTAAGAATTGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
3UTR GCA 90 bp GAGGTTAAAACATTTCTGCCAATTCTTAGTAGGGTGAGACACACCTaGCCCTTGATGCCCTGCAGACATAACAGCTGTCTGCCAGTACTT +
Preference number: 1 (lower is better)
Translates to: EVKTFLPILSRVRHT*PLMPCRHNSCLPVL
Trigger: AAGTACTGGCAGACAGCTGTTATGTCTGCAGGGCATCAAGGGGCAGGTGTGTCTCACCCTACTAAGAATTGGCAGAAATGTTTTAACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
3UTR CCA 90 bp TTTTTGGAAGCTCTCCACATTCCTGCGATCTTTTCTTTACATGCTTaGAGCATAAGGCCTTCTGGATCCAGAGCCAAGGACACAGTCAGG +
Preference number: 1 (lower is better)
Translates to: FLEALHIPAIFSLHA*SIRPSGSRAKDTVR
Trigger: CCTGACTGTGTCCTTGGCTCTGGATCCAGAAGGCCTTATGCTCCAAGCATGTAAAGAAAAGATCGCAGGAATGTGGAGAGCTTCCAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371117.8
3UTR TCA 90 bp AAGGGCAAGTCTATTGAAGGGCAAGTTCACCTTGATCAGATAAGCTaGGTCTCGCACTCTGGAAGAGACTTGAAGTTCTGTTGGTCAGGT +
Preference number: 1 (lower is better)
Translates to: KGKSIEGQVHLDQIS*VSHSGRDLKFCWSG
Trigger: ACCTGACCAACAGAACTTCAAGTCTCTTCCAGAGTGCGAGACTCAGCTTATCTGATCAAGGTGAACTTGCCCTTCAATAGACTTGCCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
3UTR GCA 90 bp TCTCTTTTTGGAAGCTCTCCACATTCCTGCGATCTTTTCTTTACATaGTTGGAGCATAAGGCCTTCTGGATCCAGAGCCAAGGACACAGT +
Preference number: 1 (lower is better)
Translates to: SLFGSSPHSCDLFFT*LEHKAFWIQSQGHS
Trigger: ACTGTGTCCTTGGCTCTGGATCCAGAAGGCCTTATGCTCCAAGCATGTAAAGAAAAGATCGCAGGAATGTGGAGAGCTTCCAAAAAGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371117.8
3UTR GCA 90 bp ATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATAGCTaGTATTTAGGCCCAAAGAGTCAATTCTGGCCTCAGGGATCACAG +
Preference number: 1 (lower is better)
Translates to: MPHARAWQVTEDVYS*YLGPKSQFWPQGSQ
Trigger: CTGTGATCCCTGAGGCCAGAATTGACTCTTTGGGCCTAAATAGCAGCTATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
3UTR TCA 90 bp ACAGTGACCACAGAGAAGGCTACCTACCTCCTTTTAGGGACAGCCTaGAGATCTGCAATACTCACCAGATGCCTAAAGAAGAGGTTAAAA +
Preference number: 1 (lower is better)
Translates to: TVTTEKATYLLLGTA*RSAILTRCLKKRLK
Trigger: TTTTAACCTCTTCTTTAGGCATCTGGTGAGTATTGCAGATCTTCAGGCTGTCCCTAAAAGGAGGTAGGTAGCCTTCTCTGTGGTCACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
3UTR TCA 90 bp TGGAGTAAGACTGATAGATGGAAGGGAGTCATTCAACTAAATTGTTaGAAGGGGAAGGCCCTGAGAGAGCTCAACTGTTCTTGGTCCTTG +
Preference number: 1 (lower is better)
Translates to: WSKTDRWKGVIQLNC*KGKALRELNCSWSL
Trigger: CAAGGACCAAGAACAGTTGAGCTCTCTCAGGGCCTTCCCCTTTCAACAATTTAGTTGAATGACTCCCTTCCATCTATCAGTCTTACTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
3UTR CCA 90 bp GTGCCCAAGCAAAATACATCATCTACAAAGAGGACTTACTCAGCATaGCAGCCAGCTTGTGCCTCCAGAGTAAACGTCTATAAACCAACT +
Preference number: 1 (lower is better)
Translates to: VPKQNTSSTKRTYSA*QPACASRVNVYKPT
Trigger: AGTTGGTTTATAGACGTTTACTCTGGAGGCACAAGCTGGCTGCCATGCTGAGTAAGTCCTCTTTGTAGATGATGTATTTTGCTTGGGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
3UTR GCA 90 bp CACAGAGAAGGCTACCTACCTCCTTTTAGGGACAGCCTGAAGATCTaGAATACTCACCAGATGCCTAAAGAAGAGGTTAAAACATTTCTG +
Preference number: 1 (lower is better)
Translates to: HREGYLPPFRDSLKI*NTHQMPKEEVKTFL
Trigger: CAGAAATGTTTTAACCTCTTCTTTAGGCATCTGGTGAGTATTGCAGATCTTCAGGCTGTCCCTAAAAGGAGGTAGGTAGCCTTCTCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371117.8
3UTR TCA 90 bp TTAACAACCTTACCAAATGTATCAATACCAGGTGAGCCTTTGTTCTaGTCTCCATTTAAACCCCCTGCACAGCCTAGAGCAGTTGCATAT +
Preference number: 1 (lower is better)
Translates to: LTTLPNVSIPGEPLF*SPFKPPAQPRAVAY
Trigger: ATATGCAACTGCTCTAGGCTGTGCAGGGGGTTTAAATGGAGATCAGAACAAAGGCTCACCTGGTATTGATACATTTGGTAAGGTTGTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371117.8
3UTR TCA 90 bp TGTCACTGCTGGGAAATATTTGCTGGGTTACCCATGTTAACGATCTaGATAAATTTAGAGTTGGCCTACAGTGGTGCTCAAATTGGCTCA +
Preference number: 1 (lower is better)
Translates to: CHCWEIFAGLPMLTI*INLELAYSGAQIGS
Trigger: TGAGCCAATTTGAGCACCACTGTAGGCCAACTCTAAATTTATTCAGATCGTTAACATGGGTAACCCAGCAAATATTTCCCAGCAGTGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
3UTR CCA 90 bp AATCACACTGTATCTGTAACTATTTCCTCCATCAGTGCACAAGAATaGCACACTGTTCCAATAATGGAACACTGGGCACATGGGAGTTAT +
Preference number: 1 (lower is better)
Translates to: NHTVSVTISSISAQE*HTVPIMEHWAHGSY
Trigger: ATAACTCCCATGTGCCCAGTGTTCCATTATTGGAACAGTGTGCCATTCTTGTGCACTGATGGAGGAAATAGTTACAGATACAGTGTGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
3UTR TCA 90 bp CCAGAGCCAAGGACACAGTCAGGCTGTTTAAAGTATTCTTCAGTTTaGAAAGAAATGGGCCCCGTACAAATGTGTGAATTTGGTGAAATT +
Preference number: 1 (lower is better)
Translates to: PEPRTQSGCLKYSSV*KEMGPVQMCEFGEI
Trigger: AATTTCACCAAATTCACACATTTGTACGGGGCCCATTTCTTTTCAAACTGAAGAATACTTTAAACAGCCTGACTGTGTCCTTGGCTCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
3UTR GCA 90 bp TCTCTTTTGTATTTCTTTGATCTGTACCATCCTCTCCATTCTGGCTaGCATCAATCTCCTCCCAGTCCTCAATCAATTTCTTCTCAATTT +
Preference number: 1 (lower is better)
Translates to: SLLYFFDLYHPLHSG*HQSPPSPQSISSQF
Trigger: AAATTGAGAAGAAATTGATTGAGGACTGGGAGGAGATTGATGGCAGCCAGAATGGAGAGGATGGTACAGATCAAAGAAATACAAAAGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
3UTR TCA 90 bp AATCTCCTCCCAGTCCTCAATCAATTTCTTCTCAATTTGAACAATTaGAACAGTGTCTTAACAAGTCTTTCCATTTGGTCCATGCTCCAA +
Preference number: 1 (lower is better)
Translates to: NLLPVLNQFLLNLNN*NSVLTSLSIWSMLQ
Trigger: TTGGAGCATGGACCAAATGGAAAGACTTGTTAAGACACTGTTTCAATTGTTCAAATTGAGAAGAAATTGATTGAGGACTGGGAGGAGATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
3UTR CCA 90 bp CATTGTGGGTGGTCAATCCAGAGAATGCTTAATAATAACCCCTGCTaGTATAAGTCAGTATTACACCATTATCAAGTTGTTAAAATCAGG +
Preference number: 1 (lower is better)
Translates to: HCGWSIQRMLNNNPC*YKSVLHHYQVVKIR
Trigger: CCTGATTTTAACAACTTGATAATGGTGTAATACTGACTTATACCAGCAGGGGTTATTATTAAGCATTCTCTGGATTGACCACCCACAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371117.8
3UTR TCA 90 bp TCAGCAAAGCCCATGAGAATATCAATTTTCATGTGTAAATCCTCATaGAGTGCAAATTTGATACGCTCACACTACTGTAGGTTCTCAATA +
Preference number: 1 (lower is better)
Translates to: SAKPMRISIFMCKSS*SANLIRSHYCRFSI
Trigger: TATTGAGAACCTACAGTAGTGTGAGCGTATCAAATTTGCACTTCATGAGGATTTACACATGAAAATTGATATTCTCATGGGCTTTGCTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
3UTR GCA 90 bp AAGCATTGTGGGTGGTCAATCCAGAGAATGCTTAATAATAACCCCTaGTGGTATAAGTCAGTATTACACCATTATCAAGTTGTTAAAATC +
Preference number: 1 (lower is better)
Translates to: KHCGWSIQRMLNNNP*WYKSVLHHYQVVKI
Trigger: GATTTTAACAACTTGATAATGGTGTAATACTGACTTATACCAGCAGGGGTTATTATTAAGCATTCTCTGGATTGACCACCCACAATGCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371117.8
3UTR CCA 90 bp TATTTAGATAAAGGGTGTAGATTGTCACTGCTGGGAAATATTTGCTaGGTTACCCATGTTAACGATCTGAATAAATTTAGAGTTGGCCTA +
Preference number: 1 (lower is better)
Translates to: YLDKGCRLSLLGNIC*VTHVNDLNKFRVGL
Trigger: TAGGCCAACTCTAAATTTATTCAGATCGTTAACATGGGTAACCCAGCAAATATTTCCCAGCAGTGACAATCTACACCCTTTATCTAAATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
3UTR GCA 90 bp ATTTATTTAGATAAAGGGTGTAGATTGTCACTGCTGGGAAATATTTaGTGGGTTACCCATGTTAACGATCTGAATAAATTTAGAGTTGGC +
Preference number: 1 (lower is better)
Translates to: IYLDKGCRLSLLGNI*WVTHVNDLNKFRVG
Trigger: GCCAACTCTAAATTTATTCAGATCGTTAACATGGGTAACCCAGCAAATATTTCCCAGCAGTGACAATCTACACCCTTTATCTAAATAAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
3UTR-3UTR TCA 90 bp TTGAGGGTCAATAAGGCTCTGGGGGAACCAATTCCTCAAATCACACTGTATCTGCAATGGTGTCACTGTTaGCACCCTCTCCACAGTCCC +
Preference number: 2 (lower is better)
Translates to: LRVNKALGEPIPQITLYLQWCHC*HPLHSP
Trigger: GGGACTGTGGAGAGGGTGTCAACAGTGACACCATTG...CAGATACAGTGTGATTTGAGGAATTGGTTCCCCCAGAGCCTTATTGACCCTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
3UTR-3UTR TCA 90 bp GATGTTTATAGCTGCTATTTAGGCCCAAAGAGTCAATTCTGGCCTCAGGGATCAGACACACCTGCCCCTTaGTGCCCTGCAGACATAACA +
Preference number: 2 (lower is better)
Translates to: DVYSCYLGPKSQFWPQGSDTPAP*CPADIT
Trigger: TGTTATGTCTGCAGGGCATCAAGGGGCAGGTGTGTC...TGATCCCTGAGGCCAGAATTGACTCTTTGGGCCTAAATAGCAGCTATAAACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
3UTR-3UTR GCA 90 bp TTGAGGGTCAATAAGGCTCTGGGGGAACCAATTCCTCAAATCACACTGTATCTGCCTCTCCATTCTGGCTaGCATCAATCTCCTCCCAGT +
Preference number: 2 (lower is better)
Translates to: LRVNKALGEPIPQITLYLPLHSG*HQSPPS
Trigger: ACTGGGAGGAGATTGATGGCAGCCAGAATGGAGAGG...CAGATACAGTGTGATTTGAGGAATTGGTTCCCCCAGAGCCTTATTGACCCTCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
3UTR CAA 90 bp CTTTTTGGAAGCTCTCCACATTCCTGCGATCTTTTCTTTACATGCTaGGAGCATAAGGCCTTCTGGATCCAGAGCCAAGGACACAGTCAG +
Preference number: 2 (lower is better)
Translates to: LFGSSPHSCDLFFTC*EHKAFWIQSQGHSQ
Trigger: CTGACTGTGTCCTTGGCTCTGGATCCAGAAGGCCTTATGCTCCAAGCATGTAAAGAAAAGATCGCAGGAATGTGGAGAGCTTCCAAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371117.8
3UTR-3UTR TCA 90 bp TCCTGCGATCTTTTCTTTACATGCTTGGAGCATAAGGCCTTCTGGATCCAGAGCGGTGAGCCTTTGTTCTaGTCTCCATTTAAACCCCCT +
Preference number: 2 (lower is better)
Translates to: SCDLFFTCLEHKAFWIQSGEPLF*SPFKPP
Trigger: AGGGGGTTTAAATGGAGATCAGAACAAAGGCTCACC...GCTCTGGATCCAGAAGGCCTTATGCTCCAAGCATGTAAAGAAAAGATCGCAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371117.8
3UTR-3UTR CCA 90 bp CTTCTTTCCTACTCCCCCATATCTGCTACTGGAACTTCCATTCCCAAAGATATCCCATCCTCTCCATTCTaGCTGCCATCAATCTCCTCC +
Preference number: 2 (lower is better)
Translates to: LLSYSPISATGTSIPKDIPSSPF*LPSISS
Trigger: GGAGGAGATTGATGGCAGCCAGAATGGAGAGGATGG...GATATCTTTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGAGTAGGAAAGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
3UTR-3UTR CCA 90 bp ATGCCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATTCAGGAGCATAAGGCCTTCTaGATCCAGAGCCAAGGACAC +
Preference number: 2 (lower is better)
Translates to: MPCRHNSCLPVLLIELIQEHKAF*IQSQGH
Trigger: GTGTCCTTGGCTCTGGATCCAGAAGGCCTTATGCTC...CTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
3UTR CAA 90 bp AAAACATTTCTGCCAATTCTTAGTAGGGTGAGACACACCTGCCCCTaGATGCCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATA +
Preference number: 2 (lower is better)
Translates to: KTFLPILSRVRHTCP*MPCRHNSCLPVLLI
Trigger: TATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGGCATCAAGGGGCAGGTGTGTCTCACCCTACTAAGAATTGGCAGAAATGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371117.8
3UTR-3UTR TCA 90 bp GCCAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATATTGGAAGGTAAGCTCTaGCAGATCAGGGAGCAGGGT +
Preference number: 2 (lower is better)
Translates to: AKIPCHMLEPGKLLKMFILEGKL*QIREQG
Trigger: ACCCTGCTCCCTGATCTGTCAGAGCTTACCTTCCAA...TATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
3UTR-3UTR TCA 90 bp GTTATTCCTACGCAGAGGGATAGGATAAAACATGCCTCCCAGAAAGACTGGTCTCTTTTAGGGACAGCCTaGAGATCTGCAATACTCACC +
Preference number: 2 (lower is better)
Translates to: VIPTQRDRIKHASQKDWSLLGTA*RSAILT
Trigger: GGTGAGTATTGCAGATCTTCAGGCTGTCCCTAAAAG...AGACCAGTCTTTCTGGGAGGCATGTTTTATCCTATCCCTCTGCGTAGGAATAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371117.8
3UTR-3UTR TCA 90 bp CAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATAGCCATGTGCAGGTAAACTaGGGCAGGGCAAGGACTAAG +
Preference number: 2 (lower is better)
Translates to: QNSMPHARAWQVTEDVYSHVQVN*GRARTK
Trigger: CTTAGTCCTTGCCCTGCCTCAGTTTACCTGCACATG...GCTATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
3UTR-3UTR GCA 90 bp CCATCCTCTTCTTTCCTACTCCCCCATATCTGCTACTGGAACTTCCATTCCCAACACCCTGCTTCCTGCTaGCTCATTAATCTTTCAAAG +
Preference number: 2 (lower is better)
Translates to: PSSSFLLPHICYWNFHSQHPASC*LINLSK
Trigger: CTTTGAAAGATTAATGAGGCAGCAGGAAGCAGGGTG...TTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGAGTAGGAAAGAAGAGGATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
3UTR-3UTR GCA 90 bp TCCCCCATATCTGCTACTGGAACTTCCATTCCCAAAGATATCCTGACTACGGACCTTCACCCTGCTTCCTaGTGCCTCATTAATCTTTCA +
Preference number: 2 (lower is better)
Translates to: SPISATGTSIPKDILTTDLHPAS*CLINLS
Trigger: TGAAAGATTAATGAGGCAGCAGGAAGCAGGGTGAAG...GTCCGTAGTCAGGATATCTTTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
3UTR-3UTR GCA 90 bp TCCATTCCCAAAGATATCCTGACTACGGACAATGGTGTCACTGTTGACACCCTCTTTCCATTTGGTCCATaGTCCAACCCATTCTTCACC +
Preference number: 2 (lower is better)
Translates to: SIPKDILTTDNGVTVDTLFPFGP*SNPFFT
Trigger: GGTGAAGAATGGGTTGGAGCATGGACCAAATGGAAA...GAGGGTGTCAACAGTGACACCATTGTCCGTAGTCAGGATATCTTTGGGAATGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
3UTR-3UTR GCA 90 bp GCCAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATATGCCCCTTGATGCCCTaGAGACATAACAGCTGTCTG +
Preference number: 2 (lower is better)
Translates to: AKIPCHMLEPGKLLKMFICPLMP*RHNSCL
Trigger: CAGACAGCTGTTATGTCTGCAGGGCATCAAGGGGCA...TATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371117.8
3UTR CAA 90 bp CCTTGTGGTTGGAAGGTAAGCTCTGACAGATCAGGGAGCAGGGTGTaGAACTGTCCCTTCAAATGCTACTACAGGATAAAGAAATGCTTT +
Preference number: 2 (lower is better)
Translates to: PCGWKVSSDRSGSRV*NCPFKCYYRIKKCF
Trigger: AAAGCATTTCTTTATCCTGTAGTAGCATTTGAAGGGACAGTTCAACACCCTGCTCCCTGATCTGTCAGAGCTTACCTTCCAACCACAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
3UTR-3UTR TCA 90 bp GACATGAATGAACATAGAGCTGCTCTCTTTGCTTTTGGTGTTTCCCTAATTCTCCAGGGAGCAGGGTGTTaGACTGTCCCTTCAAATGCT +
Preference number: 2 (lower is better)
Translates to: DMNEHRAALFAFGVSLILQGAGC*TVPSNA
Trigger: AGCATTTGAAGGGACAGTTCAACACCCTGCTCCCTG...GAGAATTAGGGAAACACCAAAAGCAAAGAGAGCAGCTCTATGTTCATTCATGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
3UTR-3UTR CCA 90 bp TCCTGCGATCTTTTCTTTACATGCTTGGAGCATAAGGCCTTCTGGATCCAGAGCAAGCTCAAAGCATTGTaGGTGGTCAATCCAGAGAAT +
Preference number: 2 (lower is better)
Translates to: SCDLFFTCLEHKAFWIQSKLKAL*VVNPEN
Trigger: ATTCTCTGGATTGACCACCCACAATGCTTTGAGCTT...GCTCTGGATCCAGAAGGCCTTATGCTCCAAGCATGTAAAGAAAAGATCGCAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
3UTR-3UTR TCA 90 bp TCCTGCGATCTTTTCTTTACATGCTTGGAGCATAAGGCCTTCTGGATCCAGAGCCATGAAGTGCAAATTTaGTACGCTCACACTACTGTA +
Preference number: 2 (lower is better)
Translates to: SCDLFFTCLEHKAFWIQSHEVQI*YAHTTV
Trigger: TACAGTAGTGTGAGCGTATCAAATTTGCACTTCATG...GCTCTGGATCCAGAAGGCCTTATGCTCCAAGCATGTAAAGAAAAGATCGCAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
3UTR-3UTR GCA 90 bp GACATGAATGAACATAGAGCTGCTCTCTTTGCTTTTGGTGTTTCCCTAATTCTCATGGCAGCCAGCTTGTaGCTCCAGAGTAAACGTCTA +
Preference number: 2 (lower is better)
Translates to: DMNEHRAALFAFGVSLILMAASL*LQSKRL
Trigger: TAGACGTTTACTCTGGAGGCACAAGCTGGCTGCCAT...GAGAATTAGGGAAACACCAAAAGCAAAGAGAGCAGCTCTATGTTCATTCATGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
3UTR-3UTR CCA 90 bp ATAGTGGGTACCCCAAACTCACTAAAGGCAAAGCTTAAGCAACCATCCTCTTCTCCCCATATCTGCTACTaGAACTTCCATTCCCAAAGA +
Preference number: 2 (lower is better)
Translates to: IVGTPNSLKAKLKQPSSSPHICY*NFHSQR
Trigger: TCTTTGGGAATGGAAGTTCCAGTAGCAGATATGGGG...AGAAGAGGATGGTTGCTTAAGCTTTGCCTTTAGTGAGTTTGGGGTACCCACTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340994.4
3UTR CAA 90 bp TCTCAATTTGAACAATTGAAACAGTGTCTTAACAAGTCTTTCCATTaGGTCCATGCTCCAACCCATTCTTCACCCTGCTTCCTGCTGCCT +
Preference number: 2 (lower is better)
Translates to: SQFEQLKQCLNKSFH*VHAPTHSSPCFLLP
Trigger: AGGCAGCAGGAAGCAGGGTGAAGAATGGGTTGGAGCATGGACCAAATGGAAAGACTTGTTAAGACACTGTTTCAATTGTTCAAATTGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
3UTR-3UTR TCA 90 bp CAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATAGCTGTATCAATACCAGGTaGGCCTTTGTTCTGATCTCC +
Preference number: 2 (lower is better)
Translates to: QNSMPHARAWQVTEDVYSCINTR*AFVLIS
Trigger: GGAGATCAGAACAAAGGCTCACCTGGTATTGATACA...GCTATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
3UTR-3UTR TCA 90 bp GATGTTTATAGCTGCTATTTAGGCCCAAAGAGTCAATTCTGGCCTCAGGGATCAGATTGCAAAGGCAAATaGCTTCAAGACCGAGAATCT +
Preference number: 2 (lower is better)
Translates to: DVYSCYLGPKSQFWPQGSDCKGK*LQDRES
Trigger: AGATTCTCGGTCTTGAAGTCATTTGCCTTTGCAATC...TGATCCCTGAGGCCAGAATTGACTCTTTGGGCCTAAATAGCAGCTATAAACATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
3UTR-3UTR GCA 90 bp ATGCCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATTCAGCTTTCTCTCTTCCAATaGAACTACACAACAACCCCT +
Preference number: 2 (lower is better)
Translates to: MPCRHNSCLPVLLIELIQLSLFQ*NYTTTP
Trigger: AGGGGTTGTTGTGTAGTTGCATTGGAAGAGAGAAAG...CTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
3UTR-3UTR GCA 90 bp GACATGAATGAACATAGAGCTGCTCTCTTTGCTTTTGGTGTTTCCCTAATTCTCGACAGCCTGAAGATCTaGAATACTCACCAGATGCCT +
Preference number: 2 (lower is better)
Translates to: DMNEHRAALFAFGVSLILDSLKI*NTHQMP
Trigger: AGGCATCTGGTGAGTATTGCAGATCTTCAGGCTGTC...GAGAATTAGGGAAACACCAAAAGCAAAGAGAGCAGCTCTATGTTCATTCATGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
3UTR-3UTR CCA 90 bp ATAGTGGGTACCCCAAACTCACTAAAGGCAAAGCTTAAGCAACCATCCTCTTCTACAAGTCTTTCCATTTaGTCCATGCTCCAACCCATT +
Preference number: 2 (lower is better)
Translates to: IVGTPNSLKAKLKQPSSSTSLSI*SMLQPI
Trigger: AATGGGTTGGAGCATGGACCAAATGGAAAGACTTGT...AGAAGAGGATGGTTGCTTAAGCTTTGCCTTTAGTGAGTTTGGGGTACCCACTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
3UTR-3UTR CCA 90 bp CAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATAGCAAGTTGCCTTGTGGTTaGAAGGTAAGCTCTGACAGA +
Preference number: 2 (lower is better)
Translates to: QNSMPHARAWQVTEDVYSKLPCG*KVSSDR
Trigger: TCTGTCAGAGCTTACCTTCCAACCACAAGGCAACTT...GCTATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
3UTR-3UTR TCA 90 bp ATGCCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATTCAGAAGTATTCTTCAGTTTaGAAAGAAATGGGCCCCGTA +
Preference number: 2 (lower is better)
Translates to: MPCRHNSCLPVLLIELIQKYSSV*KEMGPV
Trigger: TACGGGGCCCATTTCTTTTCAAACTGAAGAATACTT...CTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
3UTR-3UTR CCA 90 bp GCCAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATATCAAAGCATTGTGGGTaGTCAATCCAGAGAATGCTT +
Preference number: 2 (lower is better)
Translates to: AKIPCHMLEPGKLLKMFISKHCG*SIQRML
Trigger: AAGCATTCTCTGGATTGACCACCCACAATGCTTTGA...TATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
3UTR-3UTR GCA 90 bp GAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGTCTGATTTTGCAATTCTACTCCCCCATATCTaGTACTGGAACTTCCATTCC +
Preference number: 2 (lower is better)
Translates to: ELFISYCLRSWPRSDFAILLPHI*YWNFHS
Trigger: GGAATGGAAGTTCCAGTAGCAGATATGGGGGAGTAG...AATTGCAAAATCAGACCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340994.4
3UTR-3UTR GCA 90 bp CCCGTACAAATGTGTGAATTTGGTGAAATTGCCTTTAACAACCTTACCAAATGTATACTGGGAACATTCTaGCTTTCAGGCCAAATGCCC +
Preference number: 2 (lower is better)
Translates to: PVQMCEFGEIAFNNLTKCILGTF*LSGQMP
Trigger: GGGCATTTGGCCTGAAAGGCAGAATGTTCCCAGTAT...ACATTTGGTAAGGTTGTTAAAGGCAATTTCACCAAATTCACACATTTGTACGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
3UTR-3UTR CCA 90 bp GACATGAATGAACATAGAGCTGCTCTCTTTGCTTTTGGTGTTTCCCTAATTCTCCAGTTTGAAAAGAAATaGGCCCCGTACAAATGTGTG +
Preference number: 2 (lower is better)
Translates to: DMNEHRAALFAFGVSLILQFEKK*APYKCV
Trigger: CACACATTTGTACGGGGCCCATTTCTTTTCAAACTG...GAGAATTAGGGAAACACCAAAAGCAAAGAGAGCAGCTCTATGTTCATTCATGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371117.8
3UTR CAA 90 bp AGCTCTAATTCCAAAGATTTCAACACCACCAATTTAATATCTGAATaGCTCCTCTCTCATATAGTGGGTACCCCAAACTCACTAAAGGCA +
Preference number: 2 (lower is better)
Translates to: SSNSKDFNTTNLISE*LLSHIVGTPNSLKA
Trigger: TGCCTTTAGTGAGTTTGGGGTACCCACTATATGAGAGAGGAGCAATTCAGATATTAAATTGGTGGTGTTGAAATCTTTGGAATTAGAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
3UTR CAA 90 bp TTTGAAAAGAAATGGGCCCCGTACAAATGTGTGAATTTGGTGAAATaGCCTTTAACAACCTTACCAAATGTATCAATACCAGGTGAGCCT +
Preference number: 2 (lower is better)
Translates to: FEKKWAPYKCVNLVK*PLTTLPNVSIPGEP
Trigger: AGGCTCACCTGGTATTGATACATTTGGTAAGGTTGTTAAAGGCAATTTCACCAAATTCACACATTTGTACGGGGCCCATTTCTTTTCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371117.8
3UTR-3UTR TCA 90 bp GACATGAATGAACATAGAGCTGCTCTCTTTGCTTTTGGTGTTTCCCTAATTCTCTCTCAGCAAAGCCCATaGGAATATCAATTTTCATGT +
Preference number: 2 (lower is better)
Translates to: DMNEHRAALFAFGVSLILSQQSP*EYQFSC
Trigger: ACATGAAAATTGATATTCTCATGGGCTTTGCTGAGA...GAGAATTAGGGAAACACCAAAAGCAAAGAGAGCAGCTCTATGTTCATTCATGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371117.8
3UTR-3UTR CCA 90 bp CCTTCTATAAAAGAAGCTCAAAGCATTGTGGGTGGTCAATCCAGAGAATGCTTAATTATCCAGAAATACTaGGAACATTCTGCCTTTCAG +
Preference number: 2 (lower is better)
Translates to: PSIKEAQSIVGGQSRECLIIQKY*EHSAFQ
Trigger: CTGAAAGGCAGAATGTTCCCAGTATTTCTGGATAAT...TAAGCATTCTCTGGATTGACCACCCACAATGCTTTGAGCTTCTTTTATAGAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
3UTR-3UTR GCA 90 bp GACATGAATGAACATAGAGCTGCTCTCTTTGCTTTTGGTGTTTCCCTAATTCTCAGTATCACAGCTTTATaGATCATCTTCTCCAAAAAG +
Preference number: 2 (lower is better)
Translates to: DMNEHRAALFAFGVSLILSITAL*IIFSKK
Trigger: CTTTTTGGAGAAGATGATGCATAAAGCTGTGATACT...GAGAATTAGGGAAACACCAAAAGCAAAGAGAGCAGCTCTATGTTCATTCATGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371117.8
3UTR-3UTR GCA 90 bp GACATGAATGAACATAGAGCTGCTCTCTTTGCTTTTGGTGTTTCCCTAATTCTCTATAAACCAACTTCTTaGAAATCATTCCCTGAACAC +
Preference number: 2 (lower is better)
Translates to: DMNEHRAALFAFGVSLILYKPTS*KSFPEH
Trigger: GTGTTCAGGGAATGATTTGCAAGAAGTTGGTTTATA...GAGAATTAGGGAAACACCAAAAGCAAAGAGAGCAGCTCTATGTTCATTCATGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
3UTR CCA 72 bp GAGAGCTCAACTGTTCTTGGTCCTTGGTGGCCTCACTaGGCAGTAACAAGGGCAAGTCTATTGAAGGGCAAG +
Preference number: 3 (lower is better)
Translates to: ESSTVLGPWWPH*AVTRASLLKGK
Trigger: CTTGCCCTTCAATAGACTTGCCCTTGTTACTGCCCAGTGAGGCCACCAAGGACCAAGAACAGTTGAGCTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
3UTR GCA 72 bp CTTAGTAGGGTGAGACACACCTGCCCCTTGATGCCCTaGAGACATAACAGCTGTCTGCCAGTACTTCTCATA +
Preference number: 3 (lower is better)
Translates to: LSRVRHTCPLMP*RHNSCLPVLLI
Trigger: TATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGGCATCAAGGGGCAGGTGTGTCTCACCCTACTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
3UTR CCA 72 bp GCTCTCCACATTCCTGCGATCTTTTCTTTACATGCTTaGAGCATAAGGCCTTCTGGATCCAGAGCCAAGGAC +
Preference number: 3 (lower is better)
Translates to: ALHIPAIFSLHA*SIRPSGSRAKD
Trigger: GTCCTTGGCTCTGGATCCAGAAGGCCTTATGCTCCAAGCATGTAAAGAAAAGATCGCAGGAATGTGGAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
3UTR-3UTR CAA 90 bp GTTATTCCTACGCAGAGGGATAGGATAAAACATGCCTCCCAGAAAGACTGGTCTAGCCAGGAAGTTGCCTaGTGGTTGGAAGGTAAGCTC +
Preference number: 3 (lower is better)
Translates to: VIPTQRDRIKHASQKDWSSQEVA*WLEGKL
Trigger: GAGCTTACCTTCCAACCACAAGGCAACTTCCTGGCT...AGACCAGTCTTTCTGGGAGGCATGTTTTATCCTATCCCTCTGCGTAGGAATAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
3UTR-3UTR CAA 90 bp GATGTTTATAGCTGCTATTTAGGCCCAAAGAGTCAATTCTGGCCTCAGGGATCAAGACACACCTGCCCCTaGATGCCCTGCAGACATAAC +
Preference number: 3 (lower is better)
Translates to: DVYSCYLGPKSQFWPQGSRHTCP*MPCRHN
Trigger: GTTATGTCTGCAGGGCATCAAGGGGCAGGTGTGTCT...TGATCCCTGAGGCCAGAATTGACTCTTTGGGCCTAAATAGCAGCTATAAACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
3UTR-3UTR CAA 90 bp ATGGCACACTGTTCCAATAATGGAACACTGGGCACATGGGAGTTATTTATATCCACAATGGTGTCACTGTaGACACCCTCTCCACAGTCC +
Preference number: 3 (lower is better)
Translates to: MAHCSNNGTLGTWELFISTMVSL*TPSPQS
Trigger: GGACTGTGGAGAGGGTGTCAACAGTGACACCATTGT...GGATATAAATAACTCCCATGTGCCCAGTGTTCCATTATTGGAACAGTGTGCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
3UTR-3UTR CAA 90 bp GACATGAATGAACATAGAGCTGCTCTCTTTGCTTTTGGTGTTTCCCTAATTCTCAGCATGGCAGCCAGCTaGTGCCTCCAGAGTAAACGT +
Preference number: 3 (lower is better)
Translates to: DMNEHRAALFAFGVSLILSMAAS*CLQSKR
Trigger: ACGTTTACTCTGGAGGCACAAGCTGGCTGCCATGCT...GAGAATTAGGGAAACACCAAAAGCAAAGAGAGCAGCTCTATGTTCATTCATGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
3UTR TCA 72 bp ACAGAGAAGGCTACCTACCTCCTTTTAGGGACAGCCTaGAGATCTGCAATACTCACCAGATGCCTAAAGAAG +
Preference number: 3 (lower is better)
Translates to: TEKATYLLLGTA*RSAILTRCLKK
Trigger: CTTCTTTAGGCATCTGGTGAGTATTGCAGATCTTCAGGCTGTCCCTAAAAGGAGGTAGGTAGCCTTCTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
3UTR CCA 72 bp CCATCCTCTTCTTTCCTACTCCCCCATATCTGCTACTaGAACTTCCATTCCCAAAGATATCCTGACTACGGA +
Preference number: 3 (lower is better)
Translates to: PSSSFLLPHICY*NFHSQRYPDYG
Trigger: TCCGTAGTCAGGATATCTTTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGAGTAGGAAAGAAGAGGATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
3UTR-3UTR CAA 90 bp GATGTTTATAGCTGCTATTTAGGCCCAAAGAGTCAATTCTGGCCTCAGGGATCAAAGAAGCTCAAAGCATaGTGGGTGGTCAATCCAGAG +
Preference number: 3 (lower is better)
Translates to: DVYSCYLGPKSQFWPQGSKKLKA*WVVNPE
Trigger: CTCTGGATTGACCACCCACAATGCTTTGAGCTTCTT...TGATCCCTGAGGCCAGAATTGACTCTTTGGGCCTAAATAGCAGCTATAAACATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
3UTR TCA 72 bp CCTACAGTGGTGCTCAAATTGGCTCATCTCCAGACATaGATGAACATAGAGCTGCTCTCTTTGCTTTTGGTG +
Preference number: 3 (lower is better)
Translates to: PTVVLKLAHLQT*MNIELLSLLLV
Trigger: CACCAAAAGCAAAGAGAGCAGCTCTATGTTCATTCATGTCTGGAGATGAGCCAATTTGAGCACCACTGTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
3UTR GCA 72 bp GGCTACCTACCTCCTTTTAGGGACAGCCTGAAGATCTaGAATACTCACCAGATGCCTAAAGAAGAGGTTAAA +
Preference number: 3 (lower is better)
Translates to: GYLPPFRDSLKI*NTHQMPKEEVK
Trigger: TTTAACCTCTTCTTTAGGCATCTGGTGAGTATTGCAGATCTTCAGGCTGTCCCTAAAAGGAGGTAGGTAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
3UTR GCA 72 bp GCTAGAGCCTGGCAAGTTACTGAAGATGTTTATAGCTaGTATTTAGGCCCAAAGAGTCAATTCTGGCCTCAG +
Preference number: 3 (lower is better)
Translates to: ARAWQVTEDVYS*YLGPKSQFWPQ
Trigger: CTGAGGCCAGAATTGACTCTTTGGGCCTAAATAGCAGCTATAAACATCTTCAGTAACTTGCCAGGCTCTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
3UTR-3UTR CAA 90 bp GATGTTTATAGCTGCTATTTAGGCCCAAAGAGTCAATTCTGGCCTCAGGGATCACTTTTCTTTACATGCTaGGAGCATAAGGCCTTCTGG +
Preference number: 3 (lower is better)
Translates to: DVYSCYLGPKSQFWPQGSLFFTC*EHKAFW
Trigger: CCAGAAGGCCTTATGCTCCAAGCATGTAAAGAAAAG...TGATCCCTGAGGCCAGAATTGACTCTTTGGGCCTAAATAGCAGCTATAAACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
3UTR TCA 72 bp TCTATTGAAGGGCAAGTTCACCTTGATCAGATAAGCTaGGTCTCGCACTCTGGAAGAGACTTGAAGTTCTGT +
Preference number: 3 (lower is better)
Translates to: SIEGQVHLDQIS*VSHSGRDLKFC
Trigger: ACAGAACTTCAAGTCTCTTCCAGAGTGCGAGACTCAGCTTATCTGATCAAGGTGAACTTGCCCTTCAATAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
3UTR TCA 72 bp ACTGATAGATGGAAGGGAGTCATTCAACTAAATTGTTaGAAGGGGAAGGCCCTGAGAGAGCTCAACTGTTCT +
Preference number: 3 (lower is better)
Translates to: TDRWKGVIQLNC*KGKALRELNCS
Trigger: AGAACAGTTGAGCTCTCTCAGGGCCTTCCCCTTTCAACAATTTAGTTGAATGACTCCCTTCCATCTATCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
3UTR-3UTR CAA 90 bp ATGCCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATTCAGTTTTTGATAAAGGACTaGGCCACTTGGCTTTCTCTG +
Preference number: 3 (lower is better)
Translates to: MPCRHNSCLPVLLIELIQFLIKD*ATWLSL
Trigger: CAGAGAAAGCCAAGTGGCCAAGTCCTTTATCAAAAA...CTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371117.8
3UTR TCA 72 bp CTTTGTGAAGGGCGAAATAGAATGAAGAGTCATGACTaGCTTCTAGATTTCTGGTCTGAGTGCAGTGATGTC +
Preference number: 3 (lower is better)
Translates to: LCEGRNRMKSHD*LLDFWSECSDV
Trigger: GACATCACTGCACTCAGACCAGAAATCTAGAAGTCAGTCATGACTCTTCATTCTATTTCGCCCTTCACAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
3UTR GCA 72 bp TATTTCTTTGATCTGTACCATCCTCTCCATTCTGGCTaGCATCAATCTCCTCCCAGTCCTCAATCAATTTCT +
Preference number: 3 (lower is better)
Translates to: YFFDLYHPLHSG*HQSPPSPQSIS
Trigger: AGAAATTGATTGAGGACTGGGAGGAGATTGATGGCAGCCAGAATGGAGAGGATGGTACAGATCAAAGAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
3UTR-3UTR CAA 90 bp GATGTTTATAGCTGCTATTTAGGCCCAAAGAGTCAATTCTGGCCTCAGGGATCAAAAGTATTCTTCAGTTaGAAAAGAAATGGGCCCCGT +
Preference number: 3 (lower is better)
Translates to: DVYSCYLGPKSQFWPQGSKVFFS*KRNGPR
Trigger: ACGGGGCCCATTTCTTTTCAAACTGAAGAATACTTT...TGATCCCTGAGGCCAGAATTGACTCTTTGGGCCTAAATAGCAGCTATAAACATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371117.8
3UTR-3UTR CAA 90 bp GTTATTCCTACGCAGAGGGATAGGATAAAACATGCCTCCCAGAAAGACTGGTCTTCGTTTTTAATTCTGTaGGTGCCCAAGCAAAATACA +
Preference number: 3 (lower is better)
Translates to: VIPTQRDRIKHASQKDWSSFLIL*VPKQNT
Trigger: TGTATTTTGCTTGGGCACCAACAGAATTAAAAACGA...AGACCAGTCTTTCTGGGAGGCATGTTTTATCCTATCCCTCTGCGTAGGAATAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000371117.8
3UTR CCA 72 bp GATCCCTTCTATAAAAGAAGCTCAAAGCATTGTGGGTaGTCAATCCAGAGAATGCTTAATAATAACCCCTGC +
Preference number: 3 (lower is better)
Translates to: DPFYKRSSKHCG*SIQRMLNNNPC
Trigger: GCAGGGGTTATTATTAAGCATTCTCTGGATTGACCACCCACAATGCTTTGAGCTTCTTTTATAGAAGGGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371117.8
3UTR CCA 72 bp GCTAGATGCCAAAATTCCATGCCACATGCTAGAGCCTaGCAAGTTACTGAAGATGTTTATAGCTGCTATTTA +
Preference number: 3 (lower is better)
Translates to: ARCQNSMPHARA*QVTEDVYSCYL
Trigger: TAAATAGCAGCTATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTGGCATCTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
3UTR TCA 72 bp TGGGAAATATTTGCTGGGTTACCCATGTTAACGATCTaGATAAATTTAGAGTTGGCCTACAGTGGTGCTCAA +
Preference number: 3 (lower is better)
Translates to: WEIFAGLPMLTI*INLELAYSGAQ
Trigger: TTGAGCACCACTGTAGGCCAACTCTAAATTTATTCAGATCGTTAACATGGGTAACCCAGCAAATATTTCCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
3UTR-3UTR CAA 90 bp AGCCTGAAGATCTGCAATACTCACCAGATGCCTAAAGAAGAGGTTAAAACATTTAACAAGTGCCATTATTaGCCTAGCATTGAACTAGGA +
Preference number: 3 (lower is better)
Translates to: SLKICNTHQMPKEEVKTFNKCHY*PSIELG
Trigger: TCCTAGTTCAATGCTAGGCAAATAATGGCACTTGTT...AAATGTTTTAACCTCTTCTTTAGGCATCTGGTGAGTATTGCAGATCTTCAGGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
3UTR-3UTR CAA 90 bp CCCGTACAAATGTGTGAATTTGGTGAAATTGCCTTTAACAACCTTACCAAATGTCCAAAAAGCAGCTTTTaGATAAAGGACTTGGCCACT +
Preference number: 3 (lower is better)
Translates to: PVQMCEFGEIAFNNLTKCPKSSF*IKDLAT
Trigger: AGTGGCCAAGTCCTTTATCAAAAAGCTGCTTTTTGG...ACATTTGGTAAGGTTGTTAAAGGCAATTTCACCAAATTCACACATTTGTACGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371117.8
3UTR-3UTR CAA 90 bp GAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGTCTGATTTTGCAATTCTCTTTTGTATTTCTTaGATCTGTACCATCCTCTCC +
Preference number: 3 (lower is better)
Translates to: ELFISYCLRSWPRSDFAILFCIS*ICTILS
Trigger: GGAGAGGATGGTACAGATCAAAGAAATACAAAAGAG...AATTGCAAAATCAGACCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340994.4
3UTR GCA 72 bp GATAAAGGGTGTAGATTGTCACTGCTGGGAAATATTTaGTGGGTTACCCATGTTAACGATCTGAATAAATTT +
Preference number: 3 (lower is better)
Translates to: DKGCRLSLLGNI*WVTHVNDLNKF
Trigger: AAATTTATTCAGATCGTTAACATGGGTAACCCAGCAAATATTTCCCAGCAGTGACAATCTACACCCTTTATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
3UTR CCA 72 bp AAAGGGTGTAGATTGTCACTGCTGGGAAATATTTGCTaGGTTACCCATGTTAACGATCTGAATAAATTTAGA +
Preference number: 3 (lower is better)
Translates to: KGCRLSLLGNIC*VTHVNDLNKFR
Trigger: TCTAAATTTATTCAGATCGTTAACATGGGTAACCCAGCAAATATTTCCCAGCAGTGACAATCTACACCCTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp TCCCCCATATCTGCTACTGGAACTTCCATTCCCAAAGATATCCTGACTACGGACGACCTCCACGGCAGCTaGAACAGTGGGAGCGCCCGC +
Preference number: 4 (lower is better)
Translates to: SPISATGTSIPKDILTTDDLHGS*NSGSAR
Trigger: GCGGGCGCTCCCACTGTTCCAGCTGCCGTGGAGGTC...GTCCGTAGTCAGGATATCTTTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp TCCTGCGATCTTTTCTTTACATGCTTGGAGCATAAGGCCTTCTGGATCCAGAGCGACCTCCACGGCAGCTaGAACAGTGGGAGCGCCCGC +
Preference number: 4 (lower is better)
Translates to: SCDLFFTCLEHKAFWIQSDLHGS*NSGSAR
Trigger: GCGGGCGCTCCCACTGTTCCAGCTGCCGTGGAGGTC...GCTCTGGATCCAGAAGGCCTTATGCTCCAAGCATGTAAAGAAAAGATCGCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp GTTATTCCTACGCAGAGGGATAGGATAAAACATGCCTCCCAGAAAGACTGGTCTCCGCCAGCCAGGAGGTaGCACTGTAGACCGGAGGGG +
Preference number: 4 (lower is better)
Translates to: VIPTQRDRIKHASQKDWSPPARR*HCRPEG
Trigger: CCCCTCCGGTCTACAGTGTCACCTCCTGGCTGGCGG...AGACCAGTCTTTCTGGGAGGCATGTTTTATCCTATCCCTCTGCGTAGGAATAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp TCCCCCATATCTGCTACTGGAACTTCCATTCCCAAAGATATCCTGACTACGGACGCCTCGCCACTCCAATaGCCAGGGTCTCACCGCCTG +
Preference number: 4 (lower is better)
Translates to: SPISATGTSIPKDILTTDASPLQ*PGSHRL
Trigger: CAGGCGGTGAGACCCTGGTCATTGGAGTGGCGAGGC...GTCCGTAGTCAGGATATCTTTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp TCACTTCCCCAGCTTATTATCCAGAAATACTGGGAACATTCTGCCTTTCAGGCCGGATGGCGTGTGCCCTaGGCTCGATGGGTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: SLPQLIIQKYWEHSAFQAGWRVP*ARWVLG
Trigger: CCCCAGGACCCATCGAGCTCAGGGCACACGCCATCC...GGCCTGAAAGGCAGAATGTTCCCAGTATTTCTGGATAATAAGCTGGGGAAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp ACACTGGGCACATGGGAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGCGGGGCTGGTCCTCGTaGGACTCCAGTCACAGGTGG +
Preference number: 4 (lower is better)
Translates to: TLGTWELFISYCLRSWPRRGWSS*DSSHRW
Trigger: CCACCTGTGACTGGAGTCTCACGAGGACCAGCCCCG...CCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTCCCATGTGCCCAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp GTTATTCCTACGCAGAGGGATAGGATAAAACATGCCTCCCAGAAAGACTGGTCTCGGGGCTGGTCCTCGTaGGACTCCAGTCACAGGTGG +
Preference number: 4 (lower is better)
Translates to: VIPTQRDRIKHASQKDWSRGWSS*DSSHRW
Trigger: CCACCTGTGACTGGAGTCTCACGAGGACCAGCCCCG...AGACCAGTCTTTCTGGGAGGCATGTTTTATCCTATCCCTCTGCGTAGGAATAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp ATAGTGGGTACCCCAAACTCACTAAAGGCAAAGCTTAAGCAACCATCCTCTTCTCCGCCAGCCAGGAGGTaGCACTGTAGACCGGAGGGG +
Preference number: 4 (lower is better)
Translates to: IVGTPNSLKAKLKQPSSSPPARR*HCRPEG
Trigger: CCCCTCCGGTCTACAGTGTCACCTCCTGGCTGGCGG...AGAAGAGGATGGTTGCTTAAGCTTTGCCTTTAGTGAGTTTGGGGTACCCACTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp TCCATTCCCAAAGATATCCTGACTACGGACAATGGTGTCACTGTTGACACCCTCTGCAGTCATAGCCTCTaGCGTGGTACTCCCCGGCCG +
Preference number: 4 (lower is better)
Translates to: SIPKDILTTDNGVTVDTLCSHSL*RGTPRP
Trigger: CGGCCGGGGAGTACCACGTCAGAGGCTATGACTGCA...GAGGGTGTCAACAGTGACACCATTGTCCGTAGTCAGGATATCTTTGGGAATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp TCCTGCGATCTTTTCTTTACATGCTTGGAGCATAAGGCCTTCTGGATCCAGAGCTGCAGTCATAGCCTCTaGCGTGGTACTCCCCGGCCG +
Preference number: 4 (lower is better)
Translates to: SCDLFFTCLEHKAFWIQSCSHSL*RGTPRP
Trigger: CGGCCGGGGAGTACCACGTCAGAGGCTATGACTGCA...GCTCTGGATCCAGAAGGCCTTATGCTCCAAGCATGTAAAGAAAAGATCGCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp TCCTGCGATCTTTTCTTTACATGCTTGGAGCATAAGGCCTTCTGGATCCAGAGCGCTCAGAGCCAGCCATaGGGCCACAGAGGACAGGGA +
Preference number: 4 (lower is better)
Translates to: SCDLFFTCLEHKAFWIQSAQSQP*GHRGQG
Trigger: TCCCTGTCCTCTGTGGCCTCATGGCTGGCTCTGAGC...GCTCTGGATCCAGAAGGCCTTATGCTCCAAGCATGTAAAGAAAAGATCGCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp CCATCCTCTTCTTTCCTACTCCCCCATATCTGCTACTGGAACTTCCATTCCCAACAGCACTGGGGAGTTTaGCGGAGGGGGCTGGAGATC +
Preference number: 4 (lower is better)
Translates to: PSSSFLLPHICYWNFHSQQHWGV*RRGLEI
Trigger: GATCTCCAGCCCCCTCCGGCAAACTCCCCAGTGCTG...TTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGAGTAGGAAAGAAGAGGATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp TCCCCCATATCTGCTACTGGAACTTCCATTCCCAAAGATATCCTGACTACGGACCAGCAGTGCCGACGCTaGTGGAGGCCACTTTCACCT +
Preference number: 4 (lower is better)
Translates to: SPISATGTSIPKDILTTDQQCRR*WRPLSP
Trigger: AGGTGAAAGTGGCCTCCATCAGCGTCGGCACTGCTG...GTCCGTAGTCAGGATATCTTTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp GTTATTCCTACGCAGAGGGATAGGATAAAACATGCCTCCCAGAAAGACTGGTCTGCTCCGTCCCACTGGTaGGGTCCCCATCAGAGTTGG +
Preference number: 4 (lower is better)
Translates to: VIPTQRDRIKHASQKDWSAPSHW*GPHQSW
Trigger: CCAACTCTGATGGGGACCTCACCAGTGGGACGGAGC...AGACCAGTCTTTCTGGGAGGCATGTTTTATCCTATCCCTCTGCGTAGGAATAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp ACACTGGGCACATGGGAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGGAGGCTGACGGAGGCTaGACCTGCCACAGAAGGGCT +
Preference number: 4 (lower is better)
Translates to: TLGTWELFISYCLRSWPREADGG*TCHRRA
Trigger: AGCCCTTCTGTGGCAGGTTCAGCCTCCGTCAGCCTC...CCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTCCCATGTGCCCAGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp TCACTTCCCCAGCTTATTATCCAGAAATACTGGGAACATTCTGCCTTTCAGGCCGAGGCTGACGGAGGCTaGACCTGCCACAGAAGGGCT +
Preference number: 4 (lower is better)
Translates to: SLPQLIIQKYWEHSAFQAEADGG*TCHRRA
Trigger: AGCCCTTCTGTGGCAGGTTCAGCCTCCGTCAGCCTC...GGCCTGAAAGGCAGAATGTTCCCAGTATTTCTGGATAATAAGCTGGGGAAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp CATTCTGGCTGCCATCAATCTCCTCCCAGTCCTCAATCAATTTCTTCTCAATTTGGATGGCGTGTGCCCTaGGCTCGATGGGTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: HSGCHQSPPSPQSISSQFGWRVP*ARWVLG
Trigger: CCCCAGGACCCATCGAGCTCAGGGCACACGCCATCC...AAATTGAGAAGAAATTGATTGAGGACTGGGAGGAGATTGATGGCAGCCAGAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR GCA 90 bp TCCTGCGATCTTTTCTTTACATGCTTGGAGCATAAGGCCTTCTGGATCCAGAGCCTGATTCCACCAGATTaGCCCCTGGGCGAGCCGTTC +
Preference number: 4 (lower is better)
Translates to: SCDLFFTCLEHKAFWIQSLIPPD*PLGEPF
Trigger: GAACGGCTCGCCCAGGGGGCAATCTGGTGGAATCAG...GCTCTGGATCCAGAAGGCCTTATGCTCCAAGCATGTAAAGAAAAGATCGCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp ACACTGGGCACATGGGAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGTTTGCCGGAGGGGGCTaGAGATCCCCGAAGCAACGC +
Preference number: 4 (lower is better)
Translates to: TLGTWELFISYCLRSWPRFAGGG*RSPKQR
Trigger: GCGTTGCTTCGGGGATCTCCAGCCCCCTCCGGCAAA...CCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTCCCATGTGCCCAGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp TCCCCCATATCTGCTACTGGAACTTCCATTCCCAAAGATATCCTGACTACGGACCTGATGAACCAGCACTaGGGAGTTTGCCGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: SPISATGTSIPKDILTTDLMNQH*GVCRRG
Trigger: CCCCCTCCGGCAAACTCCCCAGTGCTGGTTCATCAG...GTCCGTAGTCAGGATATCTTTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp CTTCTTTCCTACTCCCCCATATCTGCTACTGGAACTTCCATTCCCAAAGATATCCGGCAGCTGGAACAGTaGGAGCGCCCGCATCGGGTA +
Preference number: 4 (lower is better)
Translates to: LLSYSPISATGTSIPKDIRQLEQ*ERPHRV
Trigger: TACCCGATGCGGGCGCTCCCACTGTTCCAGCTGCCG...GATATCTTTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGAGTAGGAAAGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp TCCCCCATATCTGCTACTGGAACTTCCATTCCCAAAGATATCCTGACTACGGACCCGCCACCCAAATGGTaGACCACGCTGGCTGTGTCA +
Preference number: 4 (lower is better)
Translates to: SPISATGTSIPKDILTTDPPPKW*TTLAVS
Trigger: TGACACAGCCAGCGTGGTCCACCATTTGGGTGGCGG...GTCCGTAGTCAGGATATCTTTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp GTTATTCCTACGCAGAGGGATAGGATAAAACATGCCTCCCAGAAAGACTGGTCTCAGCAGTGCCGACGCTaGTGGAGGCCACTTTCACCT +
Preference number: 4 (lower is better)
Translates to: VIPTQRDRIKHASQKDWSQQCRR*WRPLSP
Trigger: AGGTGAAAGTGGCCTCCATCAGCGTCGGCACTGCTG...AGACCAGTCTTTCTGGGAGGCATGTTTTATCCTATCCCTCTGCGTAGGAATAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp GCCAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATAGCCTCGCCACTCCAATaGCCAGGGTCTCACCGCCTG +
Preference number: 4 (lower is better)
Translates to: AKIPCHMLEPGKLLKMFIASPLQ*PGSHRL
Trigger: CAGGCGGTGAGACCCTGGTCATTGGAGTGGCGAGGC...TATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp ACACTGGGCACATGGGAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGCCCCACCAAGCTTGGTaGAGGACCACGGGCGAAGAA +
Preference number: 4 (lower is better)
Translates to: TLGTWELFISYCLRSWPRPHQAW*RTTGEE
Trigger: TTCTTCGCCCGTGGTCCTTCACCAAGCTTGGTGGGG...CCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTCCCATGTGCCCAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp TCCATTCCCAAAGATATCCTGACTACGGACAATGGTGTCACTGTTGACACCCTCTGGGTCCTGGGGCCATaGAAATCAGCTTGCCCCCTT +
Preference number: 4 (lower is better)
Translates to: SIPKDILTTDNGVTVDTLWVLGP*KSACPL
Trigger: AAGGGGGCAAGCTGATTTTCATGGCCCCAGGACCCA...GAGGGTGTCAACAGTGACACCATTGTCCGTAGTCAGGATATCTTTGGGAATGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp TCCTGCGATCTTTTCTTTACATGCTTGGAGCATAAGGCCTTCTGGATCCAGAGCTGGGTCCTGGGGCCATaGAAATCAGCTTGCCCCCTT +
Preference number: 4 (lower is better)
Translates to: SCDLFFTCLEHKAFWIQSWVLGP*KSACPL
Trigger: AAGGGGGCAAGCTGATTTTCATGGCCCCAGGACCCA...GCTCTGGATCCAGAAGGCCTTATGCTCCAAGCATGTAAAGAAAAGATCGCAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp GTTATTCCTACGCAGAGGGATAGGATAAAACATGCCTCCCAGAAAGACTGGTCTGCTCCCCGCCTGCAATaGCCATGCATGCCACACTCA +
Preference number: 4 (lower is better)
Translates to: VIPTQRDRIKHASQKDWSAPRLQ*PCMPHS
Trigger: TGAGTGTGGCATGCATGGTCATTGCAGGCGGGGAGC...AGACCAGTCTTTCTGGGAGGCATGTTTTATCCTATCCCTCTGCGTAGGAATAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp TCCCCCATATCTGCTACTGGAACTTCCATTCCCAAAGATATCCTGACTACGGACCTCGGCTGGACTTCCTaGAGGACCCCACAAACAGTC +
Preference number: 4 (lower is better)
Translates to: SPISATGTSIPKDILTTDLGWTS*RTPQTV
Trigger: GACTGTTTGTGGGGTCCTTCAGGAAGTCCAGCCGAG...GTCCGTAGTCAGGATATCTTTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp CCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATTCAGGGCCATAGCAGCAGCAGCTaGTTTTGGCCTGCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: PCRHNSCLPVLLIELIQGHSSSS*FWPASW
Trigger: CCAGCTGGCAGGCCAAAATCAGCTGCTGCTGCTATG...GCCCTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp CCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATTCAGGGCCTGGAGCCCGAGTGGTaGACTCAATCTTCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: PCRHNSCLPVLLIELIQGLEPEW*TQSSWE
Trigger: CTCCCAGGAAGATTGAGTGCACCACTCGGGCTCCAG...GCCCTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp GACATGAATGAACATAGAGCTGCTCTCTTTGCTTTTGGTGTTTCCCTAATTCTCTGGCAGTGGGGGCAGTaGCACCTCCAGGCCCCAAGC +
Preference number: 4 (lower is better)
Translates to: DMNEHRAALFAFGVSLILWQWGQ*HLQAPS
Trigger: GCTTGGGGCCTGGAGGTGGCACTGCCCCCACTGCCA...GAGAATTAGGGAAACACCAAAAGCAAAGAGAGCAGCTCTATGTTCATTCATGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp ATGCCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATTCAGGGGCGAAGAACCTGTTaGCAGCCCAGACCTCCACGG +
Preference number: 4 (lower is better)
Translates to: MPCRHNSCLPVLLIELIQGRRTC*QPRPPR
Trigger: CCGTGGAGGTCTGGGCTGGCAACAGGTTCTTCGCCC...CTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp TCCATTCCCAAAGATATCCTGACTACGGACAATGGTGTCACTGTTGACACCCTCGTCCTCTCAGGCCTGTaGCCTCTATGGTCAAGAGGC +
Preference number: 4 (lower is better)
Translates to: SIPKDILTTDNGVTVDTLVLSGL*PLWSRG
Trigger: GCCTCTTGACCATAGAGGGCACAGGCCTGAGAGGAC...GAGGGTGTCAACAGTGACACCATTGTCCGTAGTCAGGATATCTTTGGGAATGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR GCA 90 bp TCCATTCCCAAAGATATCCTGACTACGGACAATGGTGTCACTGTTGACACCCTCAACAAGGATGGCGTGTaGCCTGAGCTCGATGGGTCC +
Preference number: 4 (lower is better)
Translates to: SIPKDILTTDNGVTVDTLNKDGV*PELDGS
Trigger: GGACCCATCGAGCTCAGGGCACACGCCATCCTTGTT...GAGGGTGTCAACAGTGACACCATTGTCCGTAGTCAGGATATCTTTGGGAATGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR GCA 90 bp TCCTGCGATCTTTTCTTTACATGCTTGGAGCATAAGGCCTTCTGGATCCAGAGCCTCCTCCACAGGCACTaGCATGGACAACCCGACCAA +
Preference number: 4 (lower is better)
Translates to: SCDLFFTCLEHKAFWIQSLLHRH*HGQPDQ
Trigger: TTGGTCGGGTTGTCCATGGCAGTGCCTGTGGAGGAG...GCTCTGGATCCAGAAGGCCTTATGCTCCAAGCATGTAAAGAAAAGATCGCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp CCATCCTCTTCTTTCCTACTCCCCCATATCTGCTACTGGAACTTCCATTCCCAATCCATGACTGGCAGCTaGATGAATGCCCCCGCCACA +
Preference number: 4 (lower is better)
Translates to: PSSSFLLPHICYWNFHSQSMTGS*MNAPAT
Trigger: TGTGGCGGGGGCATTCATGCAGCTGCCAGTCATGGA...TTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGAGTAGGAAAGAAGAGGATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp TCACTTCCCCAGCTTATTATCCAGAAATACTGGGAACATTCTGCCTTTCAGGCCAAGCCCTCGATTGCCTaGCTGAGGGGTGGTGAGCCT +
Preference number: 4 (lower is better)
Translates to: SLPQLIIQKYWEHSAFQAKPSIA*LRGGEP
Trigger: AGGCTCACCACCCCTCAGCCAGGCAATCGAGGGCTT...GGCCTGAAAGGCAGAATGTTCCCAGTATTTCTGGATAATAAGCTGGGGAAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp TCCATTCCCAAAGATATCCTGACTACGGACAATGGTGTCACTGTTGACACCCTCCTGCCACCTGTACCCTaGGGTGGCTTCAGTCAGTTC +
Preference number: 4 (lower is better)
Translates to: SIPKDILTTDNGVTVDTLLPPVP*GGFSQF
Trigger: GAACTGACTGAAGCCACCCCAGGGTACAGGTGGCAG...GAGGGTGTCAACAGTGACACCATTGTCCGTAGTCAGGATATCTTTGGGAATGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp TCCCCCATATCTGCTACTGGAACTTCCATTCCCAAAGATATCCTGACTACGGACCCTCATCCCCCTGCTTaGGGCTATCCCATGATGCTC +
Preference number: 4 (lower is better)
Translates to: SPISATGTSIPKDILTTDPHPPA*GYPMML
Trigger: GAGCATCATGGGATAGCCCCAAGCAGGGGGATGAGG...GTCCGTAGTCAGGATATCTTTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp TCCATTCCCAAAGATATCCTGACTACGGACAATGGTGTCACTGTTGACACCCTCCAGCACCTGTACTTCTaGAAGCCTCTGGGCTCGGAC +
Preference number: 4 (lower is better)
Translates to: SIPKDILTTDNGVTVDTLQHLYF*KPLGSD
Trigger: GTCCGAGCCCAGAGGCTTCCAGAAGTACAGGTGCTG...GAGGGTGTCAACAGTGACACCATTGTCCGTAGTCAGGATATCTTTGGGAATGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp ACACTGGGCACATGGGAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGCACCAGATTGCCCCCTaGGCGAGCCGTTCCAGAATC +
Preference number: 4 (lower is better)
Translates to: TLGTWELFISYCLRSWPRHQIAP*ASRSRI
Trigger: GATTCTGGAACGGCTCGCCCAGGGGGCAATCTGGTG...CCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTCCCATGTGCCCAGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp TCACTTCCCCAGCTTATTATCCAGAAATACTGGGAACATTCTGCCTTTCAGGCCCACCAGATTGCCCCCTaGGCGAGCCGTTCCAGAATC +
Preference number: 4 (lower is better)
Translates to: SLPQLIIQKYWEHSAFQAHQIAP*ASRSRI
Trigger: GATTCTGGAACGGCTCGCCCAGGGGGCAATCTGGTG...GGCCTGAAAGGCAGAATGTTCCCAGTATTTCTGGATAATAAGCTGGGGAAGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp CTTCTTTCCTACTCCCCCATATCTGCTACTGGAACTTCCATTCCCAAAGATATCCCCGCATCGGGTATCTaGGGGGCTGGCAGGGTTTCA +
Preference number: 4 (lower is better)
Translates to: LLSYSPISATGTSIPKDIPASGI*GAGRVS
Trigger: TGAAACCCTGCCAGCCCCCCAGATACCCGATGCGGG...GATATCTTTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGAGTAGGAAAGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp CAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATAGCCGGCAGCTGGAACAGTaGGAGCGCCCGCATCGGGTA +
Preference number: 4 (lower is better)
Translates to: QNSMPHARAWQVTEDVYSRQLEQ*ERPHRV
Trigger: TACCCGATGCGGGCGCTCCCACTGTTCCAGCTGCCG...GCTATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp GTTATTCCTACGCAGAGGGATAGGATAAAACATGCCTCCCAGAAAGACTGGTCTTTCCCGCCACCCAAATaGTGGACCACGCTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: VIPTQRDRIKHASQKDWSFPPPK*WTTLAV
Trigger: CACAGCCAGCGTGGTCCACCATTTGGGTGGCGGGAA...AGACCAGTCTTTCTGGGAGGCATGTTTTATCCTATCCCTCTGCGTAGGAATAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp TCCTGCGATCTTTTCTTTACATGCTTGGAGCATAAGGCCTTCTGGATCCAGAGCTCCCCTAAGAAGACGTaGGGGCTCTGGAGCTCATGG +
Preference number: 4 (lower is better)
Translates to: SCDLFFTCLEHKAFWIQSSPKKT*GLWSSW
Trigger: CCATGAGCTCCAGAGCCCCCACGTCTTCTTAGGGGA...GCTCTGGATCCAGAAGGCCTTATGCTCCAAGCATGTAAAGAAAAGATCGCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp ATGGCACACTGTTCCAATAATGGAACACTGGGCACATGGGAGTTATTTATATCCGCTCCGTCCCACTGGTaGGGTCCCCATCAGAGTTGG +
Preference number: 4 (lower is better)
Translates to: MAHCSNNGTLGTWELFISAPSHW*GPHQSW
Trigger: CCAACTCTGATGGGGACCTCACCAGTGGGACGGAGC...GGATATAAATAACTCCCATGTGCCCAGTGTTCCATTATTGGAACAGTGTGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp GATGTTTATAGCTGCTATTTAGGCCCAAAGAGTCAATTCTGGCCTCAGGGATCAACAAGGTGTCGAGGCTaGCGGAGGCTGAACCTGCCA +
Preference number: 4 (lower is better)
Translates to: DVYSCYLGPKSQFWPQGSTRCRG*RRLNLP
Trigger: TGGCAGGTTCAGCCTCCGTCAGCCTCGACACCTTGT...TGATCCCTGAGGCCAGAATTGACTCTTTGGGCCTAAATAGCAGCTATAAACATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp ATGCCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATTCAGCAAGCCGACTGTGTGTaGACCGGAGCCAAGGCATCC +
Preference number: 4 (lower is better)
Translates to: MPCRHNSCLPVLLIELIQQADCV*TGAKAS
Trigger: GGATGCCTTGGCTCCGGTTCACACACAGTCGGCTTG...CTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp CCATCCTCTTCTTTCCTACTCCCCCATATCTGCTACTGGAACTTCCATTCCCAACTATTCCTGAGATGCTaGGGATGGTCCCTCCCAGCA +
Preference number: 4 (lower is better)
Translates to: PSSSFLLPHICYWNFHSQLFLRC*GWSLPA
Trigger: TGCTGGGAGGGACCATCCTCAGCATCTCAGGAATAG...TTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGAGTAGGAAAGAAGAGGATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp TCCTGCGATCTTTTCTTTACATGCTTGGAGCATAAGGCCTTCTGGATCCAGAGCAAGCTGGGTCCCTGCTaGAGCCTATTCCTGAGATGC +
Preference number: 4 (lower is better)
Translates to: SCDLFFTCLEHKAFWIQSKLGPC*SLFLRC
Trigger: GCATCTCAGGAATAGGCTTCAGCAGGGACCCAGCTT...GCTCTGGATCCAGAAGGCCTTATGCTCCAAGCATGTAAAGAAAAGATCGCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp TCACTTCCCCAGCTTATTATCCAGAAATACTGGGAACATTCTGCCTTTCAGGCCCTCCTTGCATGGCAGTaGCTACTGGTGTTGCTGCCG +
Preference number: 4 (lower is better)
Translates to: SLPQLIIQKYWEHSAFQALLAWQ*LLVLLP
Trigger: CGGCAGCAACACCAGTAGTCACTGCCATGCAAGGAG...GGCCTGAAAGGCAGAATGTTCCCAGTATTTCTGGATAATAAGCTGGGGAAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp TCCATTCCCAAAGATATCCTGACTACGGACAATGGTGTCACTGTTGACACCCTCGTGGTGGCTAACCTCTaGCCCCTAATCAGCACAGTG +
Preference number: 4 (lower is better)
Translates to: SIPKDILTTDNGVTVDTLVVANL*PLISTV
Trigger: CACTGTGCTGATTAGGGGTCAGAGGTTAGCCACCAC...GAGGGTGTCAACAGTGACACCATTGTCCGTAGTCAGGATATCTTTGGGAATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp ATAGTGGGTACCCCAAACTCACTAAAGGCAAAGCTTAAGCAACCATCCTCTTCTGAACACCAGGGCAGATaGGGCCCACCCTCTGATGCA +
Preference number: 4 (lower is better)
Translates to: IVGTPNSLKAKLKQPSSSEHQGR*GPPSDA
Trigger: TGCATCAGAGGGTGGGCCTCATCTGCCCTGGTGTTC...AGAAGAGGATGGTTGCTTAAGCTTTGCCTTTAGTGAGTTTGGGGTACCCACTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp CCATCCTCTTCTTTCCTACTCCCCCATATCTGCTACTGGAACTTCCATTCCCAATCTTCTGGGAAGGACTaGACGATCACTCTGGCTCCC +
Preference number: 4 (lower is better)
Translates to: PSSSFLLPHICYWNFHSQSSGKD*TITLAP
Trigger: GGGAGCCAGAGTGATCGTTCAGTCCTTCCCAGAAGA...TTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGAGTAGGAAAGAAGAGGATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp TCCTGCGATCTTTTCTTTACATGCTTGGAGCATAAGGCCTTCTGGATCCAGAGCGACACACCTGCCCCTTaGTGCCCTGCAGACATAACA +
Preference number: 4 (lower is better)
Translates to: SCDLFFTCLEHKAFWIQSDTPAP*CPADIT
Trigger: TGTTATGTCTGCAGGGCATCAAGGGGCAGGTGTGTC...GCTCTGGATCCAGAAGGCCTTATGCTCCAAGCATGTAAAGAAAAGATCGCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp TCCCCCATATCTGCTACTGGAACTTCCATTCCCAAAGATATCCTGACTACGGACGATCCACGTTCCCCCTaGAAGGCTACCTTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: SPISATGTSIPKDILTTDDPRSP*KATFFR
Trigger: CCTGAAGAAGGTAGCCTTGCAGGGGGAACGTGGATC...GTCCGTAGTCAGGATATCTTTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR GCA 90 bp CCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATTCAGGGCGATCCACGTTCCCCCTaGAAGGCTACCTTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: PCRHNSCLPVLLIELIQGDPRSP*KATFFR
Trigger: CCTGAAGAAGGTAGCCTTGCAGGGGGAACGTGGATC...GCCCTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp ACACTGGGCACATGGGAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGCTGGAGCCCGAGTGGTaGACTCAATCTTCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: TLGTWELFISYCLRSWPRLEPEW*TQSSWE
Trigger: CTCCCAGGAAGATTGAGTGCACCACTCGGGCTCCAG...CCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTCCCATGTGCCCAGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR GCA 90 bp CAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATAGCCAGCACTGGGGAGTTTaGCGGAGGGGGCTGGAGATC +
Preference number: 4 (lower is better)
Translates to: QNSMPHARAWQVTEDVYSQHWGV*RRGLEI
Trigger: GATCTCCAGCCCCCTCCGGCAAACTCCCCAGTGCTG...GCTATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp CCATCCTCTTCTTTCCTACTCCCCCATATCTGCTACTGGAACTTCCATTCCCAATACCACACGCGTGGCTaGAGCAGGATTCACTCCAGT +
Preference number: 4 (lower is better)
Translates to: PSSSFLLPHICYWNFHSQYHTRG*SRIHSS
Trigger: ACTGGAGTGAATCCTGCTGCAGCCACGCGTGTGGTA...TTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGAGTAGGAAAGAAGAGGATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR GCA 90 bp TTCAACACCACCAATTTAATATCTGAATTGCTCCTCTCTCATATAGTGGGTACCTGGCAGTGGGGGCAGTaGCACCTCCAGGCCCCAAGC +
Preference number: 4 (lower is better)
Translates to: FNTTNLISELLLSHIVGTWQWGQ*HLQAPS
Trigger: GCTTGGGGCCTGGAGGTGGCACTGCCCCCACTGCCA...GGTACCCACTATATGAGAGAGGAGCAATTCAGATATTAAATTGGTGGTGTTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR GCA 90 bp CATTCTGGCTGCCATCAATCTCCTCCCAGTCCTCAATCAATTTCTTCTCAATTTGGGCGAAGAACCTGTTaGCAGCCCAGACCTCCACGG +
Preference number: 4 (lower is better)
Translates to: HSGCHQSPPSPQSISSQFGRRTC*QPRPPR
Trigger: CCGTGGAGGTCTGGGCTGGCAACAGGTTCTTCGCCC...AAATTGAGAAGAAATTGATTGAGGACTGGGAGGAGATTGATGGCAGCCAGAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR GCA 90 bp TCTCATATAGTGGGTACCCCAAACTCACTAAAGGCAAAGCTTAAGCAACCATCCTGGCAGCTGCATGAATaGCCCCGCCACAGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: SHIVGTPNSLKAKLKQPSWQLHE*PRHSSG
Trigger: ACCAGAGCTGTGGCGGGGGCATTCATGCAGCTGCCA...GGATGGTTGCTTAAGCTTTGCCTTTAGTGAGTTTGGGGTACCCACTATATGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR GCA 90 bp GATGTTTATAGCTGCTATTTAGGCCCAAAGAGTCAATTCTGGCCTCAGGGATCATGGCAGCTGCATGAATaGCCCCGCCACAGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: DVYSCYLGPKSQFWPQGSWQLHE*PRHSSG
Trigger: ACCAGAGCTGTGGCGGGGGCATTCATGCAGCTGCCA...TGATCCCTGAGGCCAGAATTGACTCTTTGGGCCTAAATAGCAGCTATAAACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp CCATCCTCTTCTTTCCTACTCCCCCATATCTGCTACTGGAACTTCCATTCCCAACCTCACATCTTTTCCTaGAGCCCGAGTGGTGCACTC +
Preference number: 4 (lower is better)
Translates to: PSSSFLLPHICYWNFHSQPHIFS*SPSGAL
Trigger: GAGTGCACCACTCGGGCTCCAGGAAAAGATGTGAGG...TTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGAGTAGGAAAGAAGAGGATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp CCATCCTCTTCTTTCCTACTCCCCCATATCTGCTACTGGAACTTCCATTCCCAACCAACAGCTCCAACTTaGGAGTCTTCTGCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: PSSSFLLPHICYWNFHSQPTAPT*ESSAAR
Trigger: CCTGGCAGCAGAAGACTCCCAAGTTGGAGCTGTTGG...TTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGAGTAGGAAAGAAGAGGATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp CAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATAGCTTTGCCGGAGGGGGCTaGAGATCCCCGAAGCAACGC +
Preference number: 4 (lower is better)
Translates to: QNSMPHARAWQVTEDVYSFAGGG*RSPKQR
Trigger: GCGTTGCTTCGGGGATCTCCAGCCCCCTCCGGCAAA...GCTATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp ACACTGGGCACATGGGAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGGGAGCCAAGGCATCCTaGACGTGGACTTCCACATCC +
Preference number: 4 (lower is better)
Translates to: TLGTWELFISYCLRSWPRGAKAS*TWTSTS
Trigger: GGATGTGGAAGTCCACGTCCAGGATGCCTTGGCTCC...CCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTCCCATGTGCCCAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp CCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATTCAGGGCCCCTCCAGGCTAACCTaGCAGAGAATGGTGTGGTCT +
Preference number: 4 (lower is better)
Translates to: PCRHNSCLPVLLIELIQGPSRLT*QRMVWS
Trigger: AGACCACACCATTCTCTGCCAGGTTAGCCTGGAGGG...GCCCTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp TTGAGGGTCAATAAGGCTCTGGGGGAACCAATTCCTCAAATCACACTGTATCTGTCGGCTCATCAGCTGTaGTGGCTAACCTCTGACCCC +
Preference number: 4 (lower is better)
Translates to: LRVNKALGEPIPQITLYLSAHQL*WLTSDP
Trigger: GGGGTCAGAGGTTAGCCACCACAGCTGATGAGCCGA...CAGATACAGTGTGATTTGAGGAATTGGTTCCCCCAGAGCCTTATTGACCCTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp GTTATTCCTACGCAGAGGGATAGGATAAAACATGCCTCCCAGAAAGACTGGTCTCAGGTAGTGGGGTCCTaGGGCCAAGTCTCTTGTCTG +
Preference number: 4 (lower is better)
Translates to: VIPTQRDRIKHASQKDWSQVVGS*GQVSCL
Trigger: CAGACAAGAGACTTGGCCCCAGGACCCCACTACCTG...AGACCAGTCTTTCTGGGAGGCATGTTTTATCCTATCCCTCTGCGTAGGAATAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp TTGAGGGTCAATAAGGCTCTGGGGGAACCAATTCCTCAAATCACACTGTATCTGCCCTTCAACTGGACCTaGCTGGGCTCTTCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: LRVNKALGEPIPQITLYLPFNWT*LGSSGK
Trigger: CTTCCCAGAAGAGCCCAGCCAGGTCCAGTTGAAGGG...CAGATACAGTGTGATTTGAGGAATTGGTTCCCCCAGAGCCTTATTGACCCTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp CCATCCTCTTCTTTCCTACTCCCCCATATCTGCTACTGGAACTTCCATTCCCAATGCACTCCCTTCAACTaGACCTGGCTGGGCTCTTCT +
Preference number: 4 (lower is better)
Translates to: PSSSFLLPHICYWNFHSQCTPFN*TWLGSS
Trigger: AGAAGAGCCCAGCCAGGTCCAGTTGAAGGGAGTGCA...TTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGAGTAGGAAAGAAGAGGATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp CCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATTCAGGGCTGCACTCCCTTCAACTaGACCTGGCTGGGCTCTTCT +
Preference number: 4 (lower is better)
Translates to: PCRHNSCLPVLLIELIQGCTPFN*TWLGSS
Trigger: AGAAGAGCCCAGCCAGGTCCAGTTGAAGGGAGTGCA...GCCCTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp TCCCCCATATCTGCTACTGGAACTTCCATTCCCAAAGATATCCTGACTACGGACCCCCCGCCACAGCTCTaGTGCAGAGTAGATGATATG +
Preference number: 4 (lower is better)
Translates to: SPISATGTSIPKDILTTDPPPQL*CRVDDM
Trigger: CATATCATCTACTCTGCACCAGAGCTGTGGCGGGGG...GTCCGTAGTCAGGATATCTTTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGA
51% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp TCTCATATAGTGGGTACCCCAAACTCACTAAAGGCAAAGCTTAAGCAACCATCCTTCCCGCCACCCAAATaGTGGACCACGCTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: SHIVGTPNSLKAKLKQPSFPPPK*WTTLAV
Trigger: CACAGCCAGCGTGGTCCACCATTTGGGTGGCGGGAA...GGATGGTTGCTTAAGCTTTGCCTTTAGTGAGTTTGGGGTACCCACTATATGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp GATGTTTATAGCTGCTATTTAGGCCCAAAGAGTCAATTCTGGCCTCAGGGATCAGGCAGAATGCCTCAGTaGCCCCGCAGGAGGCTTTCT +
Preference number: 4 (lower is better)
Translates to: DVYSCYLGPKSQFWPQGSGRMPQ*PRRRLS
Trigger: AGAAAGCCTCCTGCGGGGCCACTGAGGCATTCTGCC...TGATCCCTGAGGCCAGAATTGACTCTTTGGGCCTAAATAGCAGCTATAAACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp CATTCTGGCTGCCATCAATCTCCTCCCAGTCCTCAATCAATTTCTTCTCAATTTACAAGGTGTCGAGGCTaGCGGAGGCTGAACCTGCCA +
Preference number: 4 (lower is better)
Translates to: HSGCHQSPPSPQSISSQFTRCRG*RRLNLP
Trigger: TGGCAGGTTCAGCCTCCGTCAGCCTCGACACCTTGT...AAATTGAGAAGAAATTGATTGAGGACTGGGAGGAGATTGATGGCAGCCAGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp ATGCCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATTCAGTCCCACCACAGAGACTaGTTCCACCAGATTGCCCCC +
Preference number: 4 (lower is better)
Translates to: MPCRHNSCLPVLLIELIQSHHRD*FHQIAP
Trigger: GGGGGCAATCTGGTGGAATCAGTCTCTGTGGTGGGA...CTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp TCCCCCATATCTGCTACTGGAACTTCCATTCCCAAAGATATCCTGACTACGGACACTCGCACAACCACCTaGGTATGCTGGTTGGCAGTA +
Preference number: 4 (lower is better)
Translates to: SPISATGTSIPKDILTTDTRTTT*VCWLAV
Trigger: TACTGCCAACCAGCATACTCAGGTGGTTGTGCGAGT...GTCCGTAGTCAGGATATCTTTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp TCCTGCGATCTTTTCTTTACATGCTTGGAGCATAAGGCCTTCTGGATCCAGAGCATGGACACAGGGAGTTaGCCCTTGGAGGTACTGGAA +
Preference number: 4 (lower is better)
Translates to: SCDLFFTCLEHKAFWIQSMDTGS*PLEVLE
Trigger: TTCCAGTACCTCCAAGGGTCAACTCCCTGTGTCCAT...GCTCTGGATCCAGAAGGCCTTATGCTCCAAGCATGTAAAGAAAAGATCGCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp CTTCTTTCCTACTCCCCCATATCTGCTACTGGAACTTCCATTCCCAAAGATATCCTTCTCCAGTGGCACTaGTGGCAAGACCAGAGGGTC +
Preference number: 4 (lower is better)
Translates to: LLSYSPISATGTSIPKDILLQWH*WQDQRV
Trigger: GACCCTCTGGTCTTGCCATCAGTGCCACTGGAGAAG...GATATCTTTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGAGTAGGAAAGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp GATGTTTATAGCTGCTATTTAGGCCCAAAGAGTCAATTCTGGCCTCAGGGATCACTTCTCCAGTGGCACTaGTGGCAAGACCAGAGGGTC +
Preference number: 4 (lower is better)
Translates to: DVYSCYLGPKSQFWPQGSLLQWH*WQDQRV
Trigger: GACCCTCTGGTCTTGCCATCAGTGCCACTGGAGAAG...TGATCCCTGAGGCCAGAATTGACTCTTTGGGCCTAAATAGCAGCTATAAACATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp CATTCTGGCTGCCATCAATCTCCTCCCAGTCCTCAATCAATTTCTTCTCAATTTCAAGCCGACTGTGTGTaGACCGGAGCCAAGGCATCC +
Preference number: 4 (lower is better)
Translates to: HSGCHQSPPSPQSISSQFQADCV*TGAKAS
Trigger: GGATGCCTTGGCTCCGGTTCACACACAGTCGGCTTG...AAATTGAGAAGAAATTGATTGAGGACTGGGAGGAGATTGATGGCAGCCAGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp TCACTTCCCCAGCTTATTATCCAGAAATACTGGGAACATTCTGCCTTTCAGGCCCTATTCCTGAGATGCTaGGGATGGTCCCTCCCAGCA +
Preference number: 4 (lower is better)
Translates to: SLPQLIIQKYWEHSAFQALFLRC*GWSLPA
Trigger: TGCTGGGAGGGACCATCCTCAGCATCTCAGGAATAG...GGCCTGAAAGGCAGAATGTTCCCAGTATTTCTGGATAATAAGCTGGGGAAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp ACACTGGGCACATGGGAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGGCTGAAGCCTATTCCTaGGATGCTGAGGATGGTCCC +
Preference number: 4 (lower is better)
Translates to: TLGTWELFISYCLRSWPRAEAYS*DAEDGP
Trigger: GGGACCATCCTCAGCATCTCAGGAATAGGCTTCAGC...CCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTCCCATGTGCCCAGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp TCACTTCCCCAGCTTATTATCCAGAAATACTGGGAACATTCTGCCTTTCAGGCCAGAGTGCAATTCCCCTaGCACTCGCTGGTTAGCCCA +
Preference number: 4 (lower is better)
Translates to: SLPQLIIQKYWEHSAFQARVQFP*HSLVSP
Trigger: TGGGCTAACCAGCGAGTGTCAGGGGAATTGCACTCT...GGCCTGAAAGGCAGAATGTTCCCAGTATTTCTGGATAATAAGCTGGGGAAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp TCACTTCCCCAGCTTATTATCCAGAAATACTGGGAACATTCTGCCTTTCAGGCCGAAGGGACCACGCACTaGAGAACGGTGTGGTTACCA +
Preference number: 4 (lower is better)
Translates to: SLPQLIIQKYWEHSAFQAEGTTH*RTVWLP
Trigger: TGGTAACCACACCGTTCTTCAGTGCGTGGTCCCTTC...GGCCTGAAAGGCAGAATGTTCCCAGTATTTCTGGATAATAAGCTGGGGAAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp TCCATTCCCAAAGATATCCTGACTACGGACAATGGTGTCACTGTTGACACCCTCATTGGCCTCCTGGCATaGAACAAGCAGCTTCTCCCT +
Preference number: 4 (lower is better)
Translates to: SIPKDILTTDNGVTVDTLIGLLA*NKQLLP
Trigger: AGGGAGAAGCTGCTTGTTTCATGCCAGGAGGCCAAT...GAGGGTGTCAACAGTGACACCATTGTCCGTAGTCAGGATATCTTTGGGAATGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp CCATCCTCTTCTTTCCTACTCCCCCATATCTGCTACTGGAACTTCCATTCCCAAACAGAGTGGTGCCAGTaGCATTATCCCAAGGTGGCT +
Preference number: 4 (lower is better)
Translates to: PSSSFLLPHICYWNFHSQTEWCQ*HYPKVA
Trigger: AGCCACCTTGGGATAATGTCACTGGCACCACTCTGT...TTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGAGTAGGAAAGAAGAGGATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp TCCCCCATATCTGCTACTGGAACTTCCATTCCCAAAGATATCCTGACTACGGACGCCTCAGCTGGCTATTaGAGAACCAGTCACAGCCTT +
Preference number: 4 (lower is better)
Translates to: SPISATGTSIPKDILTTDASAGY*RTSHSL
Trigger: AAGGCTGTGACTGGTTCTTCAATAGCCAGCTGAGGC...GTCCGTAGTCAGGATATCTTTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp CCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATTCAGGGCCCTTCACCCGGAGAATaGCTTGAACTTGGCCTTCAC +
Preference number: 4 (lower is better)
Translates to: PCRHNSCLPVLLIELIQGPSPGE*LELGLH
Trigger: GTGAAGGCCAAGTTCAAGTCATTCTCCGGGTGAAGG...GCCCTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp CCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATTCAGGGCCAGGGAGCAGGGTGTTaGACTGTCCCTTCAAATGCT +
Preference number: 4 (lower is better)
Translates to: PCRHNSCLPVLLIELIQGQGAGC*TVPSNA
Trigger: AGCATTTGAAGGGACAGTTCAACACCCTGCTCCCTG...GCCCTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp CCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATTCAGGGCCATGTGCAGGTAAACTaGGGCAGGGCAAGGACTAAG +
Preference number: 4 (lower is better)
Translates to: PCRHNSCLPVLLIELIQGHVQVN*GRARTK
Trigger: CTTAGTCCTTGCCCTGCCTCAGTTTACCTGCACATG...GCCCTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp TCACTTCCCCAGCTTATTATCCAGAAATACTGGGAACATTCTGCCTTTCAGGCCCCTTCCACATGGCACTaGAGAGTCCCAAGACCATGG +
Preference number: 4 (lower is better)
Translates to: SLPQLIIQKYWEHSAFQAPSTWH*RVPRPW
Trigger: CCATGGTCTTGGGACTCTGCAGTGCCATGTGGAAGG...GGCCTGAAAGGCAGAATGTTCCCAGTATTTCTGGATAATAAGCTGGGGAAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp TCACTTCCCCAGCTTATTATCCAGAAATACTGGGAACATTCTGCCTTTCAGGCCGCATTAGGGACAATCTaGCACCTGTACCCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: SLPQLIIQKYWEHSAFQAALGTI*HLYPGV
Trigger: CACCCCAGGGTACAGGTGGCAGATTGTCCCTAATGC...GGCCTGAAAGGCAGAATGTTCCCAGTATTTCTGGATAATAAGCTGGGGAAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp CCATCCTCTTCTTTCCTACTCCCCCATATCTGCTACTGGAACTTCCATTCCCAACAATCCTCATCCCCCTaGTTGGGGCTATCCCATGAT +
Preference number: 4 (lower is better)
Translates to: PSSSFLLPHICYWNFHSQQSSSP*LGLSHD
Trigger: ATCATGGGATAGCCCCAAGCAGGGGGATGAGGATTG...TTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGAGTAGGAAAGAAGAGGATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR GCA 90 bp ACACTGGGCACATGGGAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGCAGACAGGCTCACGTTaGCCTGGAAGGACTGTGTCT +
Preference number: 4 (lower is better)
Translates to: TLGTWELFISYCLRSWPRQTGSR*PGRTVS
Trigger: AGACACAGTCCTTCCAGGGCAACGTGAGCCTGTCTG...CCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTCCCATGTGCCCAGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR GCA 90 bp ATGCCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATTCAGAACAAGGATGGCGTGTaGCCTGAGCTCGATGGGTCC +
Preference number: 4 (lower is better)
Translates to: MPCRHNSCLPVLLIELIQNKDGV*PELDGS
Trigger: GGACCCATCGAGCTCAGGGCACACGCCATCCTTGTT...CTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp TCCCCCATATCTGCTACTGGAACTTCCATTCCCAAAGATATCCTGACTACGGACGTGAGTGAGCTCAGATaGTTATGGAAGGCTTGCCCC +
Preference number: 4 (lower is better)
Translates to: SPISATGTSIPKDILTTDVSELR*LWKACP
Trigger: GGGGCAAGCCTTCCATAAGCATCTGAGCTCACTCAC...GTCCGTAGTCAGGATATCTTTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR GCA 90 bp GTTATTCCTACGCAGAGGGATAGGATAAAACATGCCTCCCAGAAAGACTGGTCTTTTCAGCTCCCCGCCTaGAATGACCATGCATGCCAC +
Preference number: 4 (lower is better)
Translates to: VIPTQRDRIKHASQKDWSFQLPA*NDHACH
Trigger: GTGGCATGCATGGTCATTGCAGGCGGGGAGCTGAAA...AGACCAGTCTTTCTGGGAGGCATGTTTTATCCTATCCCTCTGCGTAGGAATAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp CCATCCTCTTCTTTCCTACTCCCCCATATCTGCTACTGGAACTTCCATTCCCAACCTCTCCATTCTGGCTaGCATCAATCTCCTCCCAGT +
Preference number: 4 (lower is better)
Translates to: PSSSFLLPHICYWNFHSQPLHSG*HQSPPS
Trigger: ACTGGGAGGAGATTGATGGCAGCCAGAATGGAGAGG...TTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGAGTAGGAAAGAAGAGGATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR GCA 90 bp TCCTGCGATCTTTTCTTTACATGCTTGGAGCATAAGGCCTTCTGGATCCAGAGCTGGTATCTGAGCAACTaGTCTTGGCCCTCCTTCCAG +
Preference number: 4 (lower is better)
Translates to: SCDLFFTCLEHKAFWIQSWYLSN*SWPSFQ
Trigger: CTGGAAGGAGGGCCAAGAGCAGTTGCTCAGATACCA...GCTCTGGATCCAGAAGGCCTTATGCTCCAAGCATGTAAAGAAAAGATCGCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp TCACTTCCCCAGCTTATTATCCAGAAATACTGGGAACATTCTGCCTTTCAGGCCTTACTCAGCCGACTTTaGCCTGGCAACTGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: SLPQLIIQKYWEHSAFQALLSRL*PGNCCL
Trigger: GAGGCAGCAGTTGCCAGGGCAAAGTCGGCTGAGTAA...GGCCTGAAAGGCAGAATGTTCCCAGTATTTCTGGATAATAAGCTGGGGAAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp ACACTGGGCACATGGGAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGCAGACAGCACAGATCTaGTCCGGCATGTCACCACAG +
Preference number: 4 (lower is better)
Translates to: TLGTWELFISYCLRSWPRQTAQI*SGMSPQ
Trigger: CTGTGGTGACATGCCGGACCAGATCTGTGCTGTCTG...CCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTCCCATGTGCCCAGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp CCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATTCAGGGCTCGTGGTCCTGGATTTaGACTGCTTACCAGCTGTCC +
Preference number: 4 (lower is better)
Translates to: PCRHNSCLPVLLIELIQGSWSWI*TAYQLS
Trigger: GGACAGCTGGTAAGCAGTCCAAATCCAGGACCACGA...GCCCTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp ACACTGGGCACATGGGAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGTTCCTGGAGCCCGAGTaGTGCACTCAATCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: TLGTWELFISYCLRSWPRFLEPE*CTQSSW
Trigger: CCAGGAAGATTGAGTGCACCACTCGGGCTCCAGGAA...CCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTCCCATGTGCCCAGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp GATGTTTATAGCTGCTATTTAGGCCCAAAGAGTCAATTCTGGCCTCAGGGATCACTGCCACCTGTACCCTaGGGTGGCTTCAGTCAGTTC +
Preference number: 4 (lower is better)
Translates to: DVYSCYLGPKSQFWPQGSLPPVP*GGFSQF
Trigger: GAACTGACTGAAGCCACCCCAGGGTACAGGTGGCAG...TGATCCCTGAGGCCAGAATTGACTCTTTGGGCCTAAATAGCAGCTATAAACATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp TCACTTCCCCAGCTTATTATCCAGAAATACTGGGAACATTCTGCCTTTCAGGCCCCAACAGCTCCAACTTaGGAGTCTTCTGCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: SLPQLIIQKYWEHSAFQAPTAPT*ESSAAR
Trigger: CCTGGCAGCAGAAGACTCCCAAGTTGGAGCTGTTGG...GGCCTGAAAGGCAGAATGTTCCCAGTATTTCTGGATAATAAGCTGGGGAAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp CCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATTCAGGGCCTTCCAGGTAGTACATaGCTCCACCCAACAGCTCCA +
Preference number: 4 (lower is better)
Translates to: PCRHNSCLPVLLIELIQGLPGST*LHPTAP
Trigger: TGGAGCTGTTGGGTGGAGCCATGTACTACCTGGAAG...GCCCTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp GTTATTCCTACGCAGAGGGATAGGATAAAACATGCCTCCCAGAAAGACTGGTCTTGCCGAACCCTGCGATaGGAAGATGGCCATTATCCG +
Preference number: 4 (lower is better)
Translates to: VIPTQRDRIKHASQKDWSCRTLR*EDGHYP
Trigger: CGGATAATGGCCATCTTCCCATCGCAGGGTTCGGCA...AGACCAGTCTTTCTGGGAGGCATGTTTTATCCTATCCCTCTGCGTAGGAATAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp TCCCCCATATCTGCTACTGGAACTTCCATTCCCAAAGATATCCTGACTACGGACGCAGCTCCTGAGATCTaGGCCACTGCAAAGGTTAAG +
Preference number: 4 (lower is better)
Translates to: SPISATGTSIPKDILTTDAAPEI*ATAKVK
Trigger: CTTAACCTTTGCAGTGGCCCAGATCTCAGGAGCTGC...GTCCGTAGTCAGGATATCTTTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp TCCTGCGATCTTTTCTTTACATGCTTGGAGCATAAGGCCTTCTGGATCCAGAGCGAGCTCGATGGGTCCTaGGGCCATGAAAATCAGCTT +
Preference number: 4 (lower is better)
Translates to: SCDLFFTCLEHKAFWIQSELDGS*GHENQL
Trigger: AAGCTGATTTTCATGGCCCCAGGACCCATCGAGCTC...GCTCTGGATCCAGAAGGCCTTATGCTCCAAGCATGTAAAGAAAAGATCGCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp GTTATTCCTACGCAGAGGGATAGGATAAAACATGCCTCCCAGAAAGACTGGTCTTCAACTGGACCTGGCTaGGCTCTTCTGGGAAGGACT +
Preference number: 4 (lower is better)
Translates to: VIPTQRDRIKHASQKDWSSTGPG*ALLGRT
Trigger: AGTCCTTCCCAGAAGAGCCCAGCCAGGTCCAGTTGA...AGACCAGTCTTTCTGGGAGGCATGTTTTATCCTATCCCTCTGCGTAGGAATAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp TTGAGGGTCAATAAGGCTCTGGGGGAACCAATTCCTCAAATCACACTGTATCTGCCACAGGCACTGCCATaGACAACCCGACCAAAGCTT +
Preference number: 4 (lower is better)
Translates to: LRVNKALGEPIPQITLYLPQALP*TTRPKL
Trigger: AAGCTTTGGTCGGGTTGTCCATGGCAGTGCCTGTGG...CAGATACAGTGTGATTTGAGGAATTGGTTCCCCCAGAGCCTTATTGACCCTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp TCACTTCCCCAGCTTATTATCCAGAAATACTGGGAACATTCTGCCTTTCAGGCCCCACAGGCACTGCCATaGACAACCCGACCAAAGCTT +
Preference number: 4 (lower is better)
Translates to: SLPQLIIQKYWEHSAFQAPQALP*TTRPKL
Trigger: AAGCTTTGGTCGGGTTGTCCATGGCAGTGCCTGTGG...GGCCTGAAAGGCAGAATGTTCCCAGTATTTCTGGATAATAAGCTGGGGAAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp GTTATTCCTACGCAGAGGGATAGGATAAAACATGCCTCCCAGAAAGACTGGTCTCCCCAGGGCCTGGAATaGTATTGTTGTATCCTCCCC +
Preference number: 4 (lower is better)
Translates to: VIPTQRDRIKHASQKDWSPQGLE*YCCILP
Trigger: GGGGAGGATACAACAATACCATTCCAGGCCCTGGGG...AGACCAGTCTTTCTGGGAGGCATGTTTTATCCTATCCCTCTGCGTAGGAATAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp CAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATAGCCCGCCACCCAAATGGTaGACCACGCTGGCTGTGTCA +
Preference number: 4 (lower is better)
Translates to: QNSMPHARAWQVTEDVYSPPPKW*TTLAVS
Trigger: TGACACAGCCAGCGTGGTCCACCATTTGGGTGGCGG...GCTATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp GATGTTTATAGCTGCTATTTAGGCCCAAAGAGTCAATTCTGGCCTCAGGGATCACTGAGCAGGAGCACCTaGAGCACAGATGTGCCCATG +
Preference number: 4 (lower is better)
Translates to: DVYSCYLGPKSQFWPQGSLSRST*STDVPM
Trigger: CATGGGCACATCTGTGCTCCAGGTGCTCCTGCTCAG...TGATCCCTGAGGCCAGAATTGACTCTTTGGGCCTAAATAGCAGCTATAAACATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp TCACTTCCCCAGCTTATTATCCAGAAATACTGGGAACATTCTGCCTTTCAGGCCAGGACTTACTCAGCATaGCAGCCAGCTTGTGCCTCC +
Preference number: 4 (lower is better)
Translates to: SLPQLIIQKYWEHSAFQARTYSA*QPACAS
Trigger: GGAGGCACAAGCTGGCTGCCATGCTGAGTAAGTCCT...GGCCTGAAAGGCAGAATGTTCCCAGTATTTCTGGATAATAAGCTGGGGAAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp TTCAACACCACCAATTTAATATCTGAATTGCTCCTCTCTCATATAGTGGGTACCCCTCGATTGCCTGGCTaGGGGGTGGTGAGCCTCACA +
Preference number: 4 (lower is better)
Translates to: FNTTNLISELLLSHIVGTPRLPG*GVVSLT
Trigger: TGTGAGGCTCACCACCCCTCAGCCAGGCAATCGAGG...GGTACCCACTATATGAGAGAGGAGCAATTCAGATATTAAATTGGTGGTGTTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp AGCCTGAAGATCTGCAATACTCACCAGATGCCTAAAGAAGAGGTTAAAACATTTCCTCGATTGCCTGGCTaGGGGGTGGTGAGCCTCACA +
Preference number: 4 (lower is better)
Translates to: SLKICNTHQMPKEEVKTFPRLPG*GVVSLT
Trigger: TGTGAGGCTCACCACCCCTCAGCCAGGCAATCGAGG...AAATGTTTTAACCTCTTCTTTAGGCATCTGGTGAGTATTGCAGATCTTCAGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp ATGGCACACTGTTCCAATAATGGAACACTGGGCACATGGGAGTTATTTATATCCTCCCACCACAGAGACTaGTTCCACCAGATTGCCCCC +
Preference number: 4 (lower is better)
Translates to: MAHCSNNGTLGTWELFISSHHRD*FHQIAP
Trigger: GGGGGCAATCTGGTGGAATCAGTCTCTGTGGTGGGA...GGATATAAATAACTCCCATGTGCCCAGTGTTCCATTATTGGAACAGTGTGCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp TCCCCCATATCTGCTACTGGAACTTCCATTCCCAAAGATATCCTGACTACGGACCAGGAACCTGGGCAATaGGCTGGTACATCATTCACT +
Preference number: 4 (lower is better)
Translates to: SPISATGTSIPKDILTTDQEPGQ*AGTSFT
Trigger: AGTGAATGATGTACCAGCTCATTGCCCAGGTTCCTG...GTCCGTAGTCAGGATATCTTTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp TTGAGGGTCAATAAGGCTCTGGGGGAACCAATTCCTCAAATCACACTGTATCTGATGGACACAGGGAGTTaGCCCTTGGAGGTACTGGAA +
Preference number: 4 (lower is better)
Translates to: LRVNKALGEPIPQITLYLMDTGS*PLEVLE
Trigger: TTCCAGTACCTCCAAGGGTCAACTCCCTGTGTCCAT...CAGATACAGTGTGATTTGAGGAATTGGTTCCCCCAGAGCCTTATTGACCCTCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp GATGTTTATAGCTGCTATTTAGGCCCAAAGAGTCAATTCTGGCCTCAGGGATCAGCTGAAGCCTATTCCTaGGATGCTGAGGATGGTCCC +
Preference number: 4 (lower is better)
Translates to: DVYSCYLGPKSQFWPQGSAEAYS*DAEDGP
Trigger: GGGACCATCCTCAGCATCTCAGGAATAGGCTTCAGC...TGATCCCTGAGGCCAGAATTGACTCTTTGGGCCTAAATAGCAGCTATAAACATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp GACATGAATGAACATAGAGCTGCTCTCTTTGCTTTTGGTGTTTCCCTAATTCTCCCCCACCAAGCTTGGTaGAGGACCACGGGCGAAGAA +
Preference number: 4 (lower is better)
Translates to: DMNEHRAALFAFGVSLILPHQAW*RTTGEE
Trigger: TTCTTCGCCCGTGGTCCTTCACCAAGCTTGGTGGGG...GAGAATTAGGGAAACACCAAAAGCAAAGAGAGCAGCTCTATGTTCATTCATGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp TCACTTCCCCAGCTTATTATCCAGAAATACTGGGAACATTCTGCCTTTCAGGCCCCCCAGAAGGATGACTaGGTTGGAGAGGTTACTTCC +
Preference number: 4 (lower is better)
Translates to: SLPQLIIQKYWEHSAFQAPQKDD*VGEVTS
Trigger: GGAAGTAACCTCTCCAACTCAGTCATCCTTCTGGGG...GGCCTGAAAGGCAGAATGTTCCCAGTATTTCTGGATAATAAGCTGGGGAAGTGA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp TTGAGGGTCAATAAGGCTCTGGGGGAACCAATTCCTCAAATCACACTGTATCTGGGTTCCCCAGAAGGATaGCTGAGTTGGAGAGGTTAC +
Preference number: 4 (lower is better)
Translates to: LRVNKALGEPIPQITLYLGSPEG*LSWRGY
Trigger: GTAACCTCTCCAACTCAGTCATCCTTCTGGGGAACC...CAGATACAGTGTGATTTGAGGAATTGGTTCCCCCAGAGCCTTATTGACCCTCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp ACACTGGGCACATGGGAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGGAACAATGCACCGGATaGGCTCAGCACCGATGTTCA +
Preference number: 4 (lower is better)
Translates to: TLGTWELFISYCLRSWPREQCTG*AQHRCS
Trigger: TGAACATCGGTGCTGAGCTCATCCGGTGCATTGTTC...CCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTCCCATGTGCCCAGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp CCTTCTATAAAAGAAGCTCAAAGCATTGTGGGTGGTCAATCCAGAGAATGCTTAGAACACCAGGGCAGATaGGGCCCACCCTCTGATGCA +
Preference number: 4 (lower is better)
Translates to: PSIKEAQSIVGGQSRECLEHQGR*GPPSDA
Trigger: TGCATCAGAGGGTGGGCCTCATCTGCCCTGGTGTTC...TAAGCATTCTCTGGATTGACCACCCACAATGCTTTGAGCTTCTTTTATAGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp TCACTTCCCCAGCTTATTATCCAGAAATACTGGGAACATTCTGCCTTTCAGGCCAACTCCCGTAGAGTGTaGTCTGAGCTCTGCCTTGGA +
Preference number: 4 (lower is better)
Translates to: SLPQLIIQKYWEHSAFQANSRRV*SELCLG
Trigger: TCCAAGGCAGAGCTCAGATCACACTCTACGGGAGTT...GGCCTGAAAGGCAGAATGTTCCCAGTATTTCTGGATAATAAGCTGGGGAAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp GATGTTTATAGCTGCTATTTAGGCCCAAAGAGTCAATTCTGGCCTCAGGGATCATCTTCTGGGAAGGACTaGACGATCACTCTGGCTCCC +
Preference number: 4 (lower is better)
Translates to: DVYSCYLGPKSQFWPQGSSSGKD*TITLAP
Trigger: GGGAGCCAGAGTGATCGTTCAGTCCTTCCCAGAAGA...TGATCCCTGAGGCCAGAATTGACTCTTTGGGCCTAAATAGCAGCTATAAACATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp TCCTGCGATCTTTTCTTTACATGCTTGGAGCATAAGGCCTTCTGGATCCAGAGCACCCGGAGAATGACTTaGACTTGGCCTTCACCTGAA +
Preference number: 4 (lower is better)
Translates to: SCDLFFTCLEHKAFWIQSTRRMT*TWPSPE
Trigger: TTCAGGTGAAGGCCAAGTTCAAGTCATTCTCCGGGT...GCTCTGGATCCAGAAGGCCTTATGCTCCAAGCATGTAAAGAAAAGATCGCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp ACACTGGGCACATGGGAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGGGCAGAGGTAGAAGCTaGAATAGTTGGGGGCATACC +
Preference number: 4 (lower is better)
Translates to: TLGTWELFISYCLRSWPRGRGRS*NSWGHT
Trigger: GGTATGCCCCCAACTATTTCAGCTTCTACCTCTGCC...CCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTCCCATGTGCCCAGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp TCCCCCATATCTGCTACTGGAACTTCCATTCCCAAAGATATCCTGACTACGGACCGTTGCCATGGAGGTTaGTGTCCTTTACCTGGTTCA +
Preference number: 4 (lower is better)
Translates to: SPISATGTSIPKDILTTDRCHGG*CPLPGS
Trigger: TGAACCAGGTAAAGGACATCAACCTCCATGGCAACG...GTCCGTAGTCAGGATATCTTTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp TTGAGGGTCAATAAGGCTCTGGGGGAACCAATTCCTCAAATCACACTGTATCTGAAAGCCAAGTCTCTCTaGTCCTGCCACAACGTTGCC +
Preference number: 4 (lower is better)
Translates to: LRVNKALGEPIPQITLYLKAKSL*SCHNVA
Trigger: GGCAACGTTGTGGCAGGATCAGAGAGACTTGGCTTT...CAGATACAGTGTGATTTGAGGAATTGGTTCCCCCAGAGCCTTATTGACCCTCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp TCCATTCCCAAAGATATCCTGACTACGGACAATGGTGTCACTGTTGACACCCTCTTGTGGCCTCGGATGTaGAAGCCAAGTCTCTCTGAT +
Preference number: 4 (lower is better)
Translates to: SIPKDILTTDNGVTVDTLLWPRM*KPSLSD
Trigger: ATCAGAGAGACTTGGCTTTCACATCCGAGGCCACAA...GAGGGTGTCAACAGTGACACCATTGTCCGTAGTCAGGATATCTTTGGGAATGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp TCCTGCGATCTTTTCTTTACATGCTTGGAGCATAAGGCCTTCTGGATCCAGAGCTTGTGGCCTCGGATGTaGAAGCCAAGTCTCTCTGAT +
Preference number: 4 (lower is better)
Translates to: SCDLFFTCLEHKAFWIQSLWPRM*KPSLSD
Trigger: ATCAGAGAGACTTGGCTTTCACATCCGAGGCCACAA...GCTCTGGATCCAGAAGGCCTTATGCTCCAAGCATGTAAAGAAAAGATCGCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp CCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATTCAGGGCATGACTCCCTTTGACTaGGTAACTAGTAAGGCCCCG +
Preference number: 4 (lower is better)
Translates to: PCRHNSCLPVLLIELIQGMTPFD*VTSKAP
Trigger: CGGGGCCTTACTAGTTACTCAGTCAAAGGGAGTCAT...GCCCTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp ATGCCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATTCAGAATTGTCCATGGCTCTaGAGGAGGTCCCAGGGACTC +
Preference number: 4 (lower is better)
Translates to: MPCRHNSCLPVLLIELIQNCPWL*RRSQGL
Trigger: GAGTCCCTGGGACCTCCTTCAGAGCCATGGACAATT...CTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp GATGTTTATAGCTGCTATTTAGGCCCAAAGAGTCAATTCTGGCCTCAGGGATCAGCTGCCTCTCTTGTCTaGAGTCTGGGCATAGCAGCA +
Preference number: 4 (lower is better)
Translates to: DVYSCYLGPKSQFWPQGSAASLV*SLGIAA
Trigger: TGCTGCTATGCCCAGACTTCAGACAAGAGAGGCAGC...TGATCCCTGAGGCCAGAATTGACTCTTTGGGCCTAAATAGCAGCTATAAACATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp TCACTTCCCCAGCTTATTATCCAGAAATACTGGGAACATTCTGCCTTTCAGGCCTTGGAAGGTAAGCTCTaGCAGATCAGGGAGCAGGGT +
Preference number: 4 (lower is better)
Translates to: SLPQLIIQKYWEHSAFQALEGKL*QIREQG
Trigger: ACCCTGCTCCCTGATCTGTCAGAGCTTACCTTCCAA...GGCCTGAAAGGCAGAATGTTCCCAGTATTTCTGGATAATAAGCTGGGGAAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp TGGGAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGTCTGATTTTGCAGGGAACACTCCGCAGTaGGGGCACCACCATGTTCAC +
Preference number: 4 (lower is better)
Translates to: WELFISYCLRSWPRSDFAGNTPQ*GHHHVH
Trigger: GTGAACATGGTGGTGCCCGCACTGCGGAGTGTTCCC...TGCAAAATCAGACCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR GCA 90 bp CTTCTTTCCTACTCCCCCATATCTGCTACTGGAACTTCCATTCCCAAAGATATCCCTTCCACATGGCACTaGAGAGTCCCAAGACCATGG +
Preference number: 4 (lower is better)
Translates to: LLSYSPISATGTSIPKDIPSTWH*RVPRPW
Trigger: CCATGGTCTTGGGACTCTGCAGTGCCATGTGGAAGG...GATATCTTTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGAGTAGGAAAGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR GCA 90 bp CCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATTCAGGGCATGGGCTGTGGCATTTaGAGGGATTGGCTGACTAGA +
Preference number: 4 (lower is better)
Translates to: PCRHNSCLPVLLIELIQGMGCGI*RDWLTR
Trigger: TCTAGTCAGCCAATCCCTGCAAATGCCACAGCCCAT...GCCCTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp GATGTTTATAGCTGCTATTTAGGCCCAAAGAGTCAATTCTGGCCTCAGGGATCATACCACACGCGTGGCTaGAGCAGGATTCACTCCAGT +
Preference number: 4 (lower is better)
Translates to: DVYSCYLGPKSQFWPQGSYHTRG*SRIHSS
Trigger: ACTGGAGTGAATCCTGCTGCAGCCACGCGTGTGGTA...TGATCCCTGAGGCCAGAATTGACTCTTTGGGCCTAAATAGCAGCTATAAACATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp CTTCTTTCCTACTCCCCCATATCTGCTACTGGAACTTCCATTCCCAAAGATATCTATGGTCCCACCACATaGCGAACCCTGCGATGGGAA +
Preference number: 4 (lower is better)
Translates to: LLSYSPISATGTSIPKDIYGPTT*RTLRWE
Trigger: TTCCCATCGCAGGGTTCGGCATGTGGTGGGACCATA...GATATCTTTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGAGTAGGAAAGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR GCA 90 bp ATGCCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATTCAGTATGGTCCCACCACATaGCGAACCCTGCGATGGGAA +
Preference number: 4 (lower is better)
Translates to: MPCRHNSCLPVLLIELIQYGPTT*RTLRWE
Trigger: TTCCCATCGCAGGGTTCGGCATGTGGTGGGACCATA...CTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp TCCCCCATATCTGCTACTGGAACTTCCATTCCCAAAGATATCCTGACTACGGACCACGATTCAAGCAGTTaGTCTGTCGCCATGGCAACT +
Preference number: 4 (lower is better)
Translates to: SPISATGTSIPKDILTTDHDSSS*SVAMAT
Trigger: AGTTGCCATGGCGACAGAGCAACTGCTTGAATCGTG...GTCCGTAGTCAGGATATCTTTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR GCA 90 bp GTTATTCCTACGCAGAGGGATAGGATAAAACATGCCTCCCAGAAAGACTGGTCTGTGAGTGAGCTCAGATaGTTATGGAAGGCTTGCCCC +
Preference number: 4 (lower is better)
Translates to: VIPTQRDRIKHASQKDWSVSELR*LWKACP
Trigger: GGGGCAAGCCTTCCATAAGCATCTGAGCTCACTCAC...AGACCAGTCTTTCTGGGAGGCATGTTTTATCCTATCCCTCTGCGTAGGAATAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp ATGGCACACTGTTCCAATAATGGAACACTGGGCACATGGGAGTTATTTATATCCCTCCTCCACAGGCACTaGCATGGACAACCCGACCAA +
Preference number: 4 (lower is better)
Translates to: MAHCSNNGTLGTWELFISLLHRH*HGQPDQ
Trigger: TTGGTCGGGTTGTCCATGGCAGTGCCTGTGGAGGAG...GGATATAAATAACTCCCATGTGCCCAGTGTTCCATTATTGGAACAGTGTGCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR GCA 90 bp TCTCATATAGTGGGTACCCCAAACTCACTAAAGGCAAAGCTTAAGCAACCATCCTTTCAGCTCCCCGCCTaGAATGACCATGCATGCCAC +
Preference number: 4 (lower is better)
Translates to: SHIVGTPNSLKAKLKQPSFQLPA*NDHACH
Trigger: GTGGCATGCATGGTCATTGCAGGCGGGGAGCTGAAA...GGATGGTTGCTTAAGCTTTGCCTTTAGTGAGTTTGGGGTACCCACTATATGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR GCA 90 bp CAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATAGCTCCATGACTGGCAGCTaGATGAATGCCCCCGCCACA +
Preference number: 4 (lower is better)
Translates to: QNSMPHARAWQVTEDVYSSMTGS*MNAPAT
Trigger: TGTGGCGGGGGCATTCATGCAGCTGCCAGTCATGGA...GCTATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp ATGCCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATTCAGCCTGGAGCACAGATGTaGCCATGGGATGTGATGCCA +
Preference number: 4 (lower is better)
Translates to: MPCRHNSCLPVLLIELIQPGAQM*PWDVMP
Trigger: TGGCATCACATCCCATGGGCACATCTGTGCTCCAGG...CTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp GTTATTCCTACGCAGAGGGATAGGATAAAACATGCCTCCCAGAAAGACTGGTCTCCCAAGCTGCCACTTTaGTTACTCAGCCGACTTTGC +
Preference number: 4 (lower is better)
Translates to: VIPTQRDRIKHASQKDWSPKLPL*LLSRLC
Trigger: GCAAAGTCGGCTGAGTAAGCAAAGTGGCAGCTTGGG...AGACCAGTCTTTCTGGGAGGCATGTTTTATCCTATCCCTCTGCGTAGGAATAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp TCCATTCCCAAAGATATCCTGACTACGGACAATGGTGTCACTGTTGACACCCTCGCTATCTCGTGGTCCTaGATTTGGACTGCTTACCAG +
Preference number: 4 (lower is better)
Translates to: SIPKDILTTDNGVTVDTLAISWS*IWTAYQ
Trigger: CTGGTAAGCAGTCCAAATCCAGGACCACGAGATAGC...GAGGGTGTCAACAGTGACACCATTGTCCGTAGTCAGGATATCTTTGGGAATGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp ATGCCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATTCAGACCTGTACCCTGGGGTaGCTTCAGTCAGTTCCAGTC +
Preference number: 4 (lower is better)
Translates to: MPCRHNSCLPVLLIELIQTCTLG*LQSVPV
Trigger: GACTGGAACTGACTGAAGCCACCCCAGGGTACAGGT...CTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp ACACTGGGCACATGGGAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGCTTCCAGGTAGTACATaGCTCCACCCAACAGCTCCA +
Preference number: 4 (lower is better)
Translates to: TLGTWELFISYCLRSWPRLPGST*LHPTAP
Trigger: TGGAGCTGTTGGGTGGAGCCATGTACTACCTGGAAG...CCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTCCCATGTGCCCAGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp CAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATAGCACTTCTGGAAGCCTCTaGGCTCGGACTCGGATCTGG +
Preference number: 4 (lower is better)
Translates to: QNSMPHARAWQVTEDVYSTSGSL*ARTRIW
Trigger: CCAGATCCGAGTCCGAGCCCAGAGGCTTCCAGAAGT...GCTATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp GCCAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATACAGCACCTGTACTTCTaGAAGCCTCTGGGCTCGGAC +
Preference number: 4 (lower is better)
Translates to: AKIPCHMLEPGKLLKMFIQHLYF*KPLGSD
Trigger: GTCCGAGCCCAGAGGCTTCCAGAAGTACAGGTGCTG...TATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp GACATGAATGAACATAGAGCTGCTCTCTTTGCTTTTGGTGTTTCCCTAATTCTCCTGATGAACCAGCACTaGGGAGTTTGCCGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: DMNEHRAALFAFGVSLILLMNQH*GVCRRG
Trigger: CCCCCTCCGGCAAACTCCCCAGTGCTGGTTCATCAG...GAGAATTAGGGAAACACCAAAAGCAAAGAGAGCAGCTCTATGTTCATTCATGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp TCCATTCCCAAAGATATCCTGACTACGGACAATGGTGTCACTGTTGACACCCTCAATCCCCAATCTGAGTaGACCAGGACAAGGTCCACA +
Preference number: 4 (lower is better)
Translates to: SIPKDILTTDNGVTVDTLNPQSE*TRTRST
Trigger: TGTGGACCTTGTCCTGGTCCACTCAGATTGGGGATT...GAGGGTGTCAACAGTGACACCATTGTCCGTAGTCAGGATATCTTTGGGAATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp TCACTTCCCCAGCTTATTATCCAGAAATACTGGGAACATTCTGCCTTTCAGGCCCATATACCACACGCGTaGCTGCAGCAGGATTCACTC +
Preference number: 4 (lower is better)
Translates to: SLPQLIIQKYWEHSAFQAHIPHA*LQQDSL
Trigger: GAGTGAATCCTGCTGCAGCCACGCGTGTGGTATATG...GGCCTGAAAGGCAGAATGTTCCCAGTATTTCTGGATAATAAGCTGGGGAAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp CCATCCTCTTCTTTCCTACTCCCCCATATCTGCTACTGGAACTTCCATTCCCAAGAAAGAGCAGGAACCTaGGCAATGAGCTGGTACATC +
Preference number: 4 (lower is better)
Translates to: PSSSFLLPHICYWNFHSQERAGT*AMSWYI
Trigger: GATGTACCAGCTCATTGCCCAGGTTCCTGCTCTTTC...TTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGAGTAGGAAAGAAGAGGATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp TCCATTCCCAAAGATATCCTGACTACGGACAATGGTGTCACTGTTGACACCCTCGTCCATCTTTCCCCCTaGGTGGAACTTTGCACTGAA +
Preference number: 4 (lower is better)
Translates to: SIPKDILTTDNGVTVDTLVHLSP*VELCTE
Trigger: TTCAGTGCAAAGTTCCACCCAGGGGGAAAGATGGAC...GAGGGTGTCAACAGTGACACCATTGTCCGTAGTCAGGATATCTTTGGGAATGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp CCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATTCAGGGCGTCCATCTTTCCCCCTaGGTGGAACTTTGCACTGAA +
Preference number: 4 (lower is better)
Translates to: PCRHNSCLPVLLIELIQGVHLSP*VELCTE
Trigger: TTCAGTGCAAAGTTCCACCCAGGGGGAAAGATGGAC...GCCCTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp CCATCCTCTTCTTTCCTACTCCCCCATATCTGCTACTGGAACTTCCATTCCCAATACCCAAACCAAAGCTaGGTCCCTGCTGAAGCCTAT +
Preference number: 4 (lower is better)
Translates to: PSSSFLLPHICYWNFHSQYPNQS*VPAEAY
Trigger: ATAGGCTTCAGCAGGGACCCAGCTTTGGTTTGGGTA...TTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGAGTAGGAAAGAAGAGGATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp TTGAGGGTCAATAAGGCTCTGGGGGAACCAATTCCTCAAATCACACTGTATCTGAGGCTCACGTTGCCCTaGAAGGACTGTGTCTCAACA +
Preference number: 4 (lower is better)
Translates to: LRVNKALGEPIPQITLYLRLTLP*KDCVST
Trigger: TGTTGAGACACAGTCCTTCCAGGGCAACGTGAGCCT...CAGATACAGTGTGATTTGAGGAATTGGTTCCCCCAGAGCCTTATTGACCCTCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp ATGGCACACTGTTCCAATAATGGAACACTGGGCACATGGGAGTTATTTATATCCCAGGTAGTGGGGTCCTaGGGCCAAGTCTCTTGTCTG +
Preference number: 4 (lower is better)
Translates to: MAHCSNNGTLGTWELFISQVVGS*GQVSCL
Trigger: CAGACAAGAGACTTGGCCCCAGGACCCCACTACCTG...GGATATAAATAACTCCCATGTGCCCAGTGTTCCATTATTGGAACAGTGTGCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp ATAGTGGGTACCCCAAACTCACTAAAGGCAAAGCTTAAGCAACCATCCTCTTCTGGCCTGTGCCCTCTATaGTCAAGAGGCTTCCACCAT +
Preference number: 4 (lower is better)
Translates to: IVGTPNSLKAKLKQPSSSGLCPL*SRGFHH
Trigger: ATGGTGGAAGCCTCTTGACCATAGAGGGCACAGGCC...AGAAGAGGATGGTTGCTTAAGCTTTGCCTTTAGTGAGTTTGGGGTACCCACTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp GATGTTTATAGCTGCTATTTAGGCCCAAAGAGTCAATTCTGGCCTCAGGGATCAGGCCTGTGCCCTCTATaGTCAAGAGGCTTCCACCAT +
Preference number: 4 (lower is better)
Translates to: DVYSCYLGPKSQFWPQGSGLCPL*SRGFHH
Trigger: ATGGTGGAAGCCTCTTGACCATAGAGGGCACAGGCC...TGATCCCTGAGGCCAGAATTGACTCTTTGGGCCTAAATAGCAGCTATAAACATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp TCACTTCCCCAGCTTATTATCCAGAAATACTGGGAACATTCTGCCTTTCAGGCCGCAGCTCCTGAGATCTaGGCCACTGCAAAGGTTAAG +
Preference number: 4 (lower is better)
Translates to: SLPQLIIQKYWEHSAFQAAAPEI*ATAKVK
Trigger: CTTAACCTTTGCAGTGGCCCAGATCTCAGGAGCTGC...GGCCTGAAAGGCAGAATGTTCCCAGTATTTCTGGATAATAAGCTGGGGAAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp CTTCTTTCCTACTCCCCCATATCTGCTACTGGAACTTCCATTCCCAAAGATATCGCACATAGGTGTGTCTaGCAGCCTCACAGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: LLSYSPISATGTSIPKDIAHRCV*QPHSCP
Trigger: AGGACAGCTGTGAGGCTGCCAGACACACCTATGTGC...GATATCTTTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGAGTAGGAAAGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp TTGAGGGTCAATAAGGCTCTGGGGGAACCAATTCCTCAAATCACACTGTATCTGCTGCAGATTACCTTCTaGAGCATTGGCCTCCTGGCA +
Preference number: 4 (lower is better)
Translates to: LRVNKALGEPIPQITLYLLQITF*SIGLLA
Trigger: TGCCAGGAGGCCAATGCTCCAGAAGGTAATCTGCAG...CAGATACAGTGTGATTTGAGGAATTGGTTCCCCCAGAGCCTTATTGACCCTCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp TCCCCCATATCTGCTACTGGAACTTCCATTCCCAAAGATATCCTGACTACGGACACTGAACGATCACTCTaGCTCCCATATCCCTGGATC +
Preference number: 4 (lower is better)
Translates to: SPISATGTSIPKDILTTDTERSL*LPYPWI
Trigger: GATCCAGGGATATGGGAGCCAGAGTGATCGTTCAGT...GTCCGTAGTCAGGATATCTTTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp CCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATTCAGGGCACTGAACGATCACTCTaGCTCCCATATCCCTGGATC +
Preference number: 4 (lower is better)
Translates to: PCRHNSCLPVLLIELIQGTERSL*LPYPWI
Trigger: GATCCAGGGATATGGGAGCCAGAGTGATCGTTCAGT...GCCCTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp ATAGTGGGTACCCCAAACTCACTAAAGGCAAAGCTTAAGCAACCATCCTCTTCTTCAACTGGACCTGGCTaGGCTCTTCTGGGAAGGACT +
Preference number: 4 (lower is better)
Translates to: IVGTPNSLKAKLKQPSSSSTGPG*ALLGRT
Trigger: AGTCCTTCCCAGAAGAGCCCAGCCAGGTCCAGTTGA...AGAAGAGGATGGTTGCTTAAGCTTTGCCTTTAGTGAGTTTGGGGTACCCACTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp TCCATTCCCAAAGATATCCTGACTACGGACAATGGTGTCACTGTTGACACCCTCCAAACTGTGAAGCTCTaGAACAGAGTGGTGCCAGTG +
Preference number: 4 (lower is better)
Translates to: SIPKDILTTDNGVTVDTLQTVKL*NRVVPV
Trigger: CACTGGCACCACTCTGTTCCAGAGCTTCACAGTTTG...GAGGGTGTCAACAGTGACACCATTGTCCGTAGTCAGGATATCTTTGGGAATGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp ATGCCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATTCAGCCCCCGCCACAGCTCTaGTGCAGAGTAGATGATATG +
Preference number: 4 (lower is better)
Translates to: MPCRHNSCLPVLLIELIQPPPQL*CRVDDM
Trigger: CATATCATCTACTCTGCACCAGAGCTGTGGCGGGGG...CTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp CCATCCTCTTCTTTCCTACTCCCCCATATCTGCTACTGGAACTTCCATTCCCAAAAAGTACTCCATGACTaGCAGCTGCATGAATGCCCC +
Preference number: 4 (lower is better)
Translates to: PSSSFLLPHICYWNFHSQKVLHD*QLHECP
Trigger: GGGGCATTCATGCAGCTGCCAGTCATGGAGTACTTT...TTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGAGTAGGAAAGAAGAGGATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp CCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATTCAGGGCGCCACAACGTTGCCATaGAGGTTGATGTCCTTTACC +
Preference number: 4 (lower is better)
Translates to: PCRHNSCLPVLLIELIQGATTLP*RLMSFT
Trigger: GGTAAAGGACATCAACCTCCATGGCAACGTTGTGGC...GCCCTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp TCCATTCCCAAAGATATCCTGACTACGGACAATGGTGTCACTGTTGACACCCTCGACCTCCTCTTGGATTaGAGGGAGCTCTATCTGTTG +
Preference number: 4 (lower is better)
Translates to: SIPKDILTTDNGVTVDTLDLLLD*RELYLL
Trigger: CAACAGATAGAGCTCCCTCCAATCCAAGAGGAGGTC...GAGGGTGTCAACAGTGACACCATTGTCCGTAGTCAGGATATCTTTGGGAATGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp TCCTGCGATCTTTTCTTTACATGCTTGGAGCATAAGGCCTTCTGGATCCAGAGCAAGGCTGGACTAGGATaGAAAGTGCATAGGGCCGAA +
Preference number: 4 (lower is better)
Translates to: SCDLFFTCLEHKAFWIQSKAGLG*KVHRAE
Trigger: TTCGGCCCTATGCACTTTCCATCCTAGTCCAGCCTT...GCTCTGGATCCAGAAGGCCTTATGCTCCAAGCATGTAAAGAAAAGATCGCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
3UTR CAA 72 bp AGCTCTCCACATTCCTGCGATCTTTTCTTTACATGCTaGGAGCATAAGGCCTTCTGGATCCAGAGCCAAGGA +
Preference number: 4 (lower is better)
Translates to: SSPHSCDLFFTC*EHKAFWIQSQG
Trigger: TCCTTGGCTCTGGATCCAGAAGGCCTTATGCTCCAAGCATGTAAAGAAAAGATCGCAGGAATGTGGAGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp TCCATTCCCAAAGATATCCTGACTACGGACAATGGTGTCACTGTTGACACCCTCAGGTTGTCCTTCCTGTaGCCAAAACCCAAATGGAGA +
Preference number: 4 (lower is better)
Translates to: SIPKDILTTDNGVTVDTLRLSFL*PKPKWR
Trigger: TCTCCATTTGGGTTTTGGTCACAGGAAGGACAACCT...GAGGGTGTCAACAGTGACACCATTGTCCGTAGTCAGGATATCTTTGGGAATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp TCCCCCATATCTGCTACTGGAACTTCCATTCCCAAAGATATCCTGACTACGGACAGTCCTTGGTTCCTCTaGCCAACTGAAATGCAAGGA +
Preference number: 4 (lower is better)
Translates to: SPISATGTSIPKDILTTDSPWFL*PTEMQG
Trigger: TCCTTGCATTTCAGTTGGTCAGAGGAACCAAGGACT...GTCCGTAGTCAGGATATCTTTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp CATTCTGGCTGCCATCAATCTCCTCCCAGTCCTCAATCAATTTCTTCTCAATTTCCCGTAGGTAAGTGGTaGCCACATCAGGATTCAGCC +
Preference number: 4 (lower is better)
Translates to: HSGCHQSPPSPQSISSQFPVGKW*PHQDSA
Trigger: GGCTGAATCCTGATGTGGTCACCACTTACCTACGGG...AAATTGAGAAGAAATTGATTGAGGACTGGGAGGAGATTGATGGCAGCCAGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp TCCTGCGATCTTTTCTTTACATGCTTGGAGCATAAGGCCTTCTGGATCCAGAGCGAAGTTTCCTCTGCCTaGTACATTCAGCACCTGTAC +
Preference number: 4 (lower is better)
Translates to: SCDLFFTCLEHKAFWIQSEVSSA*YIQHLY
Trigger: GTACAGGTGCTGAATGTATCAGGCAGAGGAAACTTC...GCTCTGGATCCAGAAGGCCTTATGCTCCAAGCATGTAAAGAAAAGATCGCAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp TCCCCCATATCTGCTACTGGAACTTCCATTCCCAAAGATATCCTGACTACGGACTTTGCAGGGATTGGCTaGCTAGAGACATTGTCCCAA +
Preference number: 4 (lower is better)
Translates to: SPISATGTSIPKDILTTDFAGIG*LETLSQ
Trigger: TTGGGACAATGTCTCTAGTCAGCCAATCCCTGCAAA...GTCCGTAGTCAGGATATCTTTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp CTTCTTTCCTACTCCCCCATATCTGCTACTGGAACTTCCATTCCCAAAGATATCCCAGAGGGAGAAGGTTaGTCTGATGAACCAGCACTG +
Preference number: 4 (lower is better)
Translates to: LLSYSPISATGTSIPKDIPEGEG*SDEPAL
Trigger: CAGTGCTGGTTCATCAGATCAACCTTCTCCCTCTGG...GATATCTTTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGAGTAGGAAAGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp GATGTTTATAGCTGCTATTTAGGCCCAAAGAGTCAATTCTGGCCTCAGGGATCACCAGAGGGAGAAGGTTaGTCTGATGAACCAGCACTG +
Preference number: 4 (lower is better)
Translates to: DVYSCYLGPKSQFWPQGSPEGEG*SDEPAL
Trigger: CAGTGCTGGTTCATCAGATCAACCTTCTCCCTCTGG...TGATCCCTGAGGCCAGAATTGACTCTTTGGGCCTAAATAGCAGCTATAAACATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp GATGTTTATAGCTGCTATTTAGGCCCAAAGAGTCAATTCTGGCCTCAGGGATCAACTCGCACAACCACCTaGGTATGCTGGTTGGCAGTA +
Preference number: 4 (lower is better)
Translates to: DVYSCYLGPKSQFWPQGSTRTTT*VCWLAV
Trigger: TACTGCCAACCAGCATACTCAGGTGGTTGTGCGAGT...TGATCCCTGAGGCCAGAATTGACTCTTTGGGCCTAAATAGCAGCTATAAACATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp TTGAGGGTCAATAAGGCTCTGGGGGAACCAATTCCTCAAATCACACTGTATCTGGAGATCAACCCCTTGTaGGTGAATGCTGACCCCATT +
Preference number: 4 (lower is better)
Translates to: LRVNKALGEPIPQITLYLEINPL*VNADPI
Trigger: AATGGGGTCAGCATTCACTCACAAGGGGTTGATCTC...CAGATACAGTGTGATTTGAGGAATTGGTTCCCCCAGAGCCTTATTGACCCTCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp GTTATTCCTACGCAGAGGGATAGGATAAAACATGCCTCCCAGAAAGACTGGTCTGAGATCAACCCCTTGTaGGTGAATGCTGACCCCATT +
Preference number: 4 (lower is better)
Translates to: VIPTQRDRIKHASQKDWSEINPL*VNADPI
Trigger: AATGGGGTCAGCATTCACTCACAAGGGGTTGATCTC...AGACCAGTCTTTCTGGGAGGCATGTTTTATCCTATCCCTCTGCGTAGGAATAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp TCCATTCCCAAAGATATCCTGACTACGGACAATGGTGTCACTGTTGACACCCTCTCAGGCTGCTATTTGTaGTTTCTCCTTGCATGGCAG +
Preference number: 4 (lower is better)
Translates to: SIPKDILTTDNGVTVDTLSGCYL*FLLAWQ
Trigger: CTGCCATGCAAGGAGAAATCACAAATAGCAGCCTGA...GAGGGTGTCAACAGTGACACCATTGTCCGTAGTCAGGATATCTTTGGGAATGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp GATGTTTATAGCTGCTATTTAGGCCCAAAGAGTCAATTCTGGCCTCAGGGATCAGGTTCCCCAGAAGGATaGCTGAGTTGGAGAGGTTAC +
Preference number: 4 (lower is better)
Translates to: DVYSCYLGPKSQFWPQGSGSPEG*LSWRGY
Trigger: GTAACCTCTCCAACTCAGTCATCCTTCTGGGGAACC...TGATCCCTGAGGCCAGAATTGACTCTTTGGGCCTAAATAGCAGCTATAAACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp GTTATTCCTACGCAGAGGGATAGGATAAAACATGCCTCCCAGAAAGACTGGTCTAATGTTTGCAGCTCCTaGGATCTGGGCCACTGCAAA +
Preference number: 4 (lower is better)
Translates to: VIPTQRDRIKHASQKDWSNVCSS*DLGHCK
Trigger: TTTGCAGTGGCCCAGATCTCAGGAGCTGCAAACATT...AGACCAGTCTTTCTGGGAGGCATGTTTTATCCTATCCCTCTGCGTAGGAATAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp CATTCTGGCTGCCATCAATCTCCTCCCAGTCCTCAATCAATTTCTTCTCAATTTGAAGGGACCACGCACTaGAGAACGGTGTGGTTACCA +
Preference number: 4 (lower is better)
Translates to: HSGCHQSPPSPQSISSQFEGTTH*RTVWLP
Trigger: TGGTAACCACACCGTTCTTCAGTGCGTGGTCCCTTC...AAATTGAGAAGAAATTGATTGAGGACTGGGAGGAGATTGATGGCAGCCAGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp GTTATTCCTACGCAGAGGGATAGGATAAAACATGCCTCCCAGAAAGACTGGTCTACCACACACAGCAGCTaGGACATTCCCTGGAGAAAA +
Preference number: 4 (lower is better)
Translates to: VIPTQRDRIKHASQKDWSTTHSS*DIPWRK
Trigger: TTTTCTCCAGGGAATGTCTCAGCTGCTGTGTGTGGT...AGACCAGTCTTTCTGGGAGGCATGTTTTATCCTATCCCTCTGCGTAGGAATAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp TCCATTCCCAAAGATATCCTGACTACGGACAATGGTGTCACTGTTGACACCCTCATTGACTCTGCCCAATaGTCTGGCACAAAGAGGCAT +
Preference number: 4 (lower is better)
Translates to: SIPKDILTTDNGVTVDTLIDSAQ*SGTKRH
Trigger: ATGCCTCTTTGTGCCAGATCATTGGGCAGAGTCAAT...GAGGGTGTCAACAGTGACACCATTGTCCGTAGTCAGGATATCTTTGGGAATGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp TCTCATATAGTGGGTACCCCAAACTCACTAAAGGCAAAGCTTAAGCAACCATCCTTGACGGTAATTGGCTaGTTGGGCGTCTCACACTCC +
Preference number: 4 (lower is better)
Translates to: SHIVGTPNSLKAKLKQPSLTVIG*LGVSHS
Trigger: GGAGTGTGAGACGCCCAATCAGCCAATTACCGTCAA...GGATGGTTGCTTAAGCTTTGCCTTTAGTGAGTTTGGGGTACCCACTATATGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp GATGTTTATAGCTGCTATTTAGGCCCAAAGAGTCAATTCTGGCCTCAGGGATCATTGACGGTAATTGGCTaGTTGGGCGTCTCACACTCC +
Preference number: 4 (lower is better)
Translates to: DVYSCYLGPKSQFWPQGSLTVIG*LGVSHS
Trigger: GGAGTGTGAGACGCCCAATCAGCCAATTACCGTCAA...TGATCCCTGAGGCCAGAATTGACTCTTTGGGCCTAAATAGCAGCTATAAACATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp TCTCATATAGTGGGTACCCCAAACTCACTAAAGGCAAAGCTTAAGCAACCATCCAAAGAAAAGTTGCCCTaGGTGTTCTGGCCCCAGCGT +
Preference number: 4 (lower is better)
Translates to: SHIVGTPNSLKAKLKQPSKEKLP*VFWPQR
Trigger: ACGCTGGGGCCAGAACACTCAGGGCAACTTTTCTTT...GGATGGTTGCTTAAGCTTTGCCTTTAGTGAGTTTGGGGTACCCACTATATGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp ATGCCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATTCAGGGGAAAGAAGGGAGTTaGGTAGGAACTCCCGTAGAG +
Preference number: 4 (lower is better)
Translates to: MPCRHNSCLPVLLIELIQGKEGS*VGTPVE
Trigger: CTCTACGGGAGTTCCTACTCAACTCCCTTCTTTCCC...CTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp TCCTGCGATCTTTTCTTTACATGCTTGGAGCATAAGGCCTTCTGGATCCAGAGCAAGAAGCGGAGCTTGTaGTGTTTGGTTGGTCATGAG +
Preference number: 4 (lower is better)
Translates to: SCDLFFTCLEHKAFWIQSKKRSL*CLVGHE
Trigger: CTCATGACCAACCAAACATCACAAGCTCCGCTTCTT...GCTCTGGATCCAGAAGGCCTTATGCTCCAAGCATGTAAAGAAAAGATCGCAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp TCCTGCGATCTTTTCTTTACATGCTTGGAGCATAAGGCCTTCTGGATCCAGAGCGTGCAATGTTCTGAGTaGAGGAAAGAAGCGGAGCTT +
Preference number: 4 (lower is better)
Translates to: SCDLFFTCLEHKAFWIQSVQCSE*RKEAEL
Trigger: AAGCTCCGCTTCTTTCCTTCACTCAGAACATTGCAC...GCTCTGGATCCAGAAGGCCTTATGCTCCAAGCATGTAAAGAAAAGATCGCAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp ACACTGGGCACATGGGAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGTCCTTGGGAACAGTCTaGACAGGTTCTAATGGCCAC +
Preference number: 4 (lower is better)
Translates to: TLGTWELFISYCLRSWPRSLGTV*TGSNGH
Trigger: GTGGCCATTAGAACCTGTTCAGACTGTTCCCAAGGA...CCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTCCCATGTGCCCAGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp GTTATTCCTACGCAGAGGGATAGGATAAAACATGCCTCCCAGAAAGACTGGTCTTCCTTGGGAACAGTCTaGACAGGTTCTAATGGCCAC +
Preference number: 4 (lower is better)
Translates to: VIPTQRDRIKHASQKDWSSLGTV*TGSNGH
Trigger: GTGGCCATTAGAACCTGTTCAGACTGTTCCCAAGGA...AGACCAGTCTTTCTGGGAGGCATGTTTTATCCTATCCCTCTGCGTAGGAATAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp ACACTGGGCACATGGGAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGACCCGGAGAATGACTTaGACTTGGCCTTCACCTGAA +
Preference number: 4 (lower is better)
Translates to: TLGTWELFISYCLRSWPRTRRMT*TWPSPE
Trigger: TTCAGGTGAAGGCCAAGTTCAAGTCATTCTCCGGGT...CCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTCCCATGTGCCCAGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp ATGCCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATTCAGGGCAGAGGTAGAAGCTaGAATAGTTGGGGGCATACC +
Preference number: 4 (lower is better)
Translates to: MPCRHNSCLPVLLIELIQGRGRS*NSWGHT
Trigger: GGTATGCCCCCAACTATTTCAGCTTCTACCTCTGCC...CTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp CCTTCTATAAAAGAAGCTCAAAGCATTGTGGGTGGTCAATCCAGAGAATGCTTACTCGGCTGGACTTCCTaGAGGACCCCACAAACAGTC +
Preference number: 4 (lower is better)
Translates to: PSIKEAQSIVGGQSRECLLGWTS*RTPQTV
Trigger: GACTGTTTGTGGGGTCCTTCAGGAAGTCCAGCCGAG...TAAGCATTCTCTGGATTGACCACCCACAATGCTTTGAGCTTCTTTTATAGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp TTGAGGGTCAATAAGGCTCTGGGGGAACCAATTCCTCAAATCACACTGTATCTGTTACCTGGTTCACTTTaGTTCCCGCCACCCAAATGG +
Preference number: 4 (lower is better)
Translates to: LRVNKALGEPIPQITLYLLPGSL*FPPPKW
Trigger: CCATTTGGGTGGCGGGAATCAAAGTGAACCAGGTAA...CAGATACAGTGTGATTTGAGGAATTGGTTCCCCCAGAGCCTTATTGACCCTCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp TCCCCCATATCTGCTACTGGAACTTCCATTCCCAAAGATATCCTGACTACGGACAAGGCCATGAAGACTTaGATGCGCCACATTGTCAGA +
Preference number: 4 (lower is better)
Translates to: SPISATGTSIPKDILTTDKAMKT*MRHIVR
Trigger: TCTGACAATGTGGCGCATTCAAGTCTTCATGGCCTT...GTCCGTAGTCAGGATATCTTTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp CCATCCTCTTCTTTCCTACTCCCCCATATCTGCTACTGGAACTTCCATTCCCAAGGTGGCCACAATGACTaGATTCCTAAGCACAATCTG +
Preference number: 4 (lower is better)
Translates to: PSSSFLLPHICYWNFHSQGGHND*IPKHNL
Trigger: CAGATTGTGCTTAGGAATTCAGTCATTGTGGCCACC...TTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGAGTAGGAAAGAAGAGGATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp TCCTGCGATCTTTTCTTTACATGCTTGGAGCATAAGGCCTTCTGGATCCAGAGCGGTGGCCACAATGACTaGATTCCTAAGCACAATCTG +
Preference number: 4 (lower is better)
Translates to: SCDLFFTCLEHKAFWIQSGGHND*IPKHNL
Trigger: CAGATTGTGCTTAGGAATTCAGTCATTGTGGCCACC...GCTCTGGATCCAGAAGGCCTTATGCTCCAAGCATGTAAAGAAAAGATCGCAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp ACACTGGGCACATGGGAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGCCACTGATTTGGTTCTaGGGTGAATACAGGCCACAG +
Preference number: 4 (lower is better)
Translates to: TLGTWELFISYCLRSWPRPLIWF*GEYRPQ
Trigger: CTGTGGCCTGTATTCACCTCAGAACCAAATCAGTGG...CCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTCCCATGTGCCCAGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp CCATCCTCTTCTTTCCTACTCCCCCATATCTGCTACTGGAACTTCCATTCCCAAGCTCCTCCTCTATTCTaGAATCTTCAAAGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: PSSSFLLPHICYWNFHSQAPPLF*NLQSLL
Trigger: GAGCAGGCTTTGAAGATTTCAGAATAGAGGAGGAGC...TTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGAGTAGGAAAGAAGAGGATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp ATGCCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATTCAGACAGTGAGGGCCAAGTaGATGGAAACACCTGAGCGT +
Preference number: 4 (lower is better)
Translates to: MPCRHNSCLPVLLIELIQTVRAK*METPER
Trigger: ACGCTCAGGTGTTTCCATTCACTTGGCCCTCACTGT...CTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp TCCTGCGATCTTTTCTTTACATGCTTGGAGCATAAGGCCTTCTGGATCCAGAGCCTGAAACCATCACAGTaGGGGCCAAGTGAATGGAAA +
Preference number: 4 (lower is better)
Translates to: SCDLFFTCLEHKAFWIQSLKPSQ*GPSEWK
Trigger: TTTCCATTCACTTGGCCCTCACTGTGATGGTTTCAG...GCTCTGGATCCAGAAGGCCTTATGCTCCAAGCATGTAAAGAAAAGATCGCAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp GACATGAATGAACATAGAGCTGCTCTCTTTGCTTTTGGTGTTTCCCTAATTCTCGGGAAGCAGCCAGGATaGTGGTCGACTTCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: DMNEHRAALFAFGVSLILGKQPG*WSTSPS
Trigger: GGAAGGAGAAGTCGACCATCATCCTGGCTGCTTCCC...GAGAATTAGGGAAACACCAAAAGCAAAGAGAGCAGCTCTATGTTCATTCATGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp AGCCTGAAGATCTGCAATACTCACCAGATGCCTAAAGAAGAGGTTAAAACATTTTGCAGGTACACCTGCTaGGCAGGAGCACCTGGAGCA +
Preference number: 4 (lower is better)
Translates to: SLKICNTHQMPKEEVKTFCRYTC*AGAPGA
Trigger: TGCTCCAGGTGCTCCTGCTCAGCAGGTGTACCTGCA...AAATGTTTTAACCTCTTCTTTAGGCATCTGGTGAGTATTGCAGATCTTCAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp TCCTGCGATCTTTTCTTTACATGCTTGGAGCATAAGGCCTTCTGGATCCAGAGCGATCACAGTTGCTCCTaGATAGTTTCCGGGTGTACT +
Preference number: 4 (lower is better)
Translates to: SCDLFFTCLEHKAFWIQSDHSCS*IVSGCT
Trigger: AGTACACCCGGAAACTATTCAGGAGCAACTGTGATC...GCTCTGGATCCAGAAGGCCTTATGCTCCAAGCATGTAAAGAAAAGATCGCAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp TCCTGCGATCTTTTCTTTACATGCTTGGAGCATAAGGCCTTCTGGATCCAGAGCCTTGATCAGATAAGCTaGGTCTCGCACTCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: SCDLFFTCLEHKAFWIQSLDQIS*VSHSGR
Trigger: TCTTCCAGAGTGCGAGACTCAGCTTATCTGATCAAG...GCTCTGGATCCAGAAGGCCTTATGCTCCAAGCATGTAAAGAAAAGATCGCAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp AGCCTGAAGATCTGCAATACTCACCAGATGCCTAAAGAAGAGGTTAAAACATTTGGGAACACTCCGCAGTaGGGGCACCACCATGTTCAC +
Preference number: 4 (lower is better)
Translates to: SLKICNTHQMPKEEVKTFGNTPQ*GHHHVH
Trigger: GTGAACATGGTGGTGCCCGCACTGCGGAGTGTTCCC...AAATGTTTTAACCTCTTCTTTAGGCATCTGGTGAGTATTGCAGATCTTCAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp TTGAGGGTCAATAAGGCTCTGGGGGAACCAATTCCTCAAATCACACTGTATCTGATGGGCTGTGGCATTTaGAGGGATTGGCTGACTAGA +
Preference number: 4 (lower is better)
Translates to: LRVNKALGEPIPQITLYLMGCGI*RDWLTR
Trigger: TCTAGTCAGCCAATCCCTGCAAATGCCACAGCCCAT...CAGATACAGTGTGATTTGAGGAATTGGTTCCCCCAGAGCCTTATTGACCCTCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR GCA 90 bp CCATCCTCTTCTTTCCTACTCCCCCATATCTGCTACTGGAACTTCCATTCCCAATGCTCTGGGAAGAACTaGAGAATAGTCCCCTCTGAT +
Preference number: 4 (lower is better)
Translates to: PSSSFLLPHICYWNFHSQCSGKN*RIVPSD
Trigger: ATCAGAGGGGACTATTCTGCAGTTCTTCCCAGAGCA...TTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGAGTAGGAAAGAAGAGGATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR GCA 90 bp ACACTGGGCACATGGGAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGTGTCACAGGACCGATTaGCCACAAGTACCCAAACCA +
Preference number: 4 (lower is better)
Translates to: TLGTWELFISYCLRSWPRCHRTD*PQVPKP
Trigger: TGGTTTGGGTACTTGTGGGCAATCGGTCCTGTGACA...CCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTCCCATGTGCCCAGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR GCA 90 bp CCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATTCAGGGCGACTACTGGTGTTGCTaGCGCTTCATACATGAAGGT +
Preference number: 4 (lower is better)
Translates to: PCRHNSCLPVLLIELIQGDYWCC*RFIHEG
Trigger: ACCTTCATGTATGAAGCGGCAGCAACACCAGTAGTC...GCCCTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp CCATCCTCTTCTTTCCTACTCCCCCATATCTGCTACTGGAACTTCCATTCCCAAGGCATCACTGCAAATTaGTGGAGCACCACAGACATA +
Preference number: 4 (lower is better)
Translates to: PSSSFLLPHICYWNFHSQGITAN*WSTTDI
Trigger: TATGTCTGTGGTGCTCCAGCAATTTGCAGTGATGCC...TTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGAGTAGGAAAGAAGAGGATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR GCA 90 bp CATTCTGGCTGCCATCAATCTCCTCCCAGTCCTCAATCAATTTCTTCTCAATTTCCACATGCCGAACCCTaGGATGGGAAGATGGCCATT +
Preference number: 4 (lower is better)
Translates to: HSGCHQSPPSPQSISSQFPHAEP*DGKMAI
Trigger: AATGGCCATCTTCCCATCGCAGGGTTCGGCATGTGG...AAATTGAGAAGAAATTGATTGAGGACTGGGAGGAGATTGATGGCAGCCAGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR GCA 90 bp CAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATAGCCCACATGCCGAACCCTaGGATGGGAAGATGGCCATT +
Preference number: 4 (lower is better)
Translates to: QNSMPHARAWQVTEDVYSPHAEP*DGKMAI
Trigger: AATGGCCATCTTCCCATCGCAGGGTTCGGCATGTGG...GCTATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp TTGAGGGTCAATAAGGCTCTGGGGGAACCAATTCCTCAAATCACACTGTATCTGCCTTCTTCAACACCTTaGCATGTTTCAGGGAGGGAC +
Preference number: 4 (lower is better)
Translates to: LRVNKALGEPIPQITLYLPSSTP*HVSGRD
Trigger: GTCCCTCCCTGAAACATGGCAAGGTGTTGAAGAAGG...CAGATACAGTGTGATTTGAGGAATTGGTTCCCCCAGAGCCTTATTGACCCTCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR GCA 90 bp TTGAGGGTCAATAAGGCTCTGGGGGAACCAATTCCTCAAATCACACTGTATCTGCCGCCACAGCTCTGGTaGAGAGTAGATGATATGATC +
Preference number: 4 (lower is better)
Translates to: LRVNKALGEPIPQITLYLPPQLW*RVDDMI
Trigger: GATCATATCATCTACTCTGCACCAGAGCTGTGGCGG...CAGATACAGTGTGATTTGAGGAATTGGTTCCCCCAGAGCCTTATTGACCCTCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR GCA 90 bp ACACTGGGCACATGGGAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGGACCCTCTAAATCTATaGCATGGCCAGCTGTGCCAA +
Preference number: 4 (lower is better)
Translates to: TLGTWELFISYCLRSWPRDPLNL*HGQLCQ
Trigger: TTGGCACAGCTGGCCATGGCATAGATTTAGAGGGTC...CCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTCCCATGTGCCCAGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR GCA 90 bp TCCCCCATATCTGCTACTGGAACTTCCATTCCCAAAGATATCCTGACTACGGACTGCGTTGAAGAAGGATaGAGTCCATTCTGCCTCTGT +
Preference number: 4 (lower is better)
Translates to: SPISATGTSIPKDILTTDCVEEG*SPFCLC
Trigger: ACAGAGGCAGAATGGACTGCATCCTTCTTCAACGCA...GTCCGTAGTCAGGATATCTTTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR GCA 90 bp GATGTTTATAGCTGCTATTTAGGCCCAAAGAGTCAATTCTGGCCTCAGGGATCACTTTGCCCTGGCAACTaGTGCCTCTCTTGTCTGAAG +
Preference number: 4 (lower is better)
Translates to: DVYSCYLGPKSQFWPQGSLCPGN*CLSCLK
Trigger: CTTCAGACAAGAGAGGCAGCAGTTGCCAGGGCAAAG...TGATCCCTGAGGCCAGAATTGACTCTTTGGGCCTAAATAGCAGCTATAAACATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp ATGCCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATTCAGTGCCCCTTGATGCCCTaGAGACATAACAGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: MPCRHNSCLPVLLIELIQCPLMP*RHNSCL
Trigger: CAGACAGCTGTTATGTCTGCAGGGCATCAAGGGGCA...CTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp ACACTGGGCACATGGGAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGCGTGGACATGTTATCTaGTTAGAGCTCAGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: TLGTWELFISYCLRSWPRRGHVI*LELSLQ
Trigger: CTGCAGGCTGAGCTCTAACCAGATAACATGTCCACG...CCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTCCCATGTGCCCAGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp GCCAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATATTCCTGGAGCCCGAGTaGTGCACTCAATCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: AKIPCHMLEPGKLLKMFIFLEPE*CTQSSW
Trigger: CCAGGAAGATTGAGTGCACCACTCGGGCTCCAGGAA...TATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp AGCCTGAAGATCTGCAATACTCACCAGATGCCTAAAGAAGAGGTTAAAACATTTAACAGGCCCGTCTCCTaGGCCAGAGGGAGAAGGTTG +
Preference number: 4 (lower is better)
Translates to: SLKICNTHQMPKEEVKTFNRPVS*ARGRRL
Trigger: CAACCTTCTCCCTCTGGCCCAGGAGACGGGCCTGTT...AAATGTTTTAACCTCTTCTTTAGGCATCTGGTGAGTATTGCAGATCTTCAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp GTTATTCCTACGCAGAGGGATAGGATAAAACATGCCTCCCAGAAAGACTGGTCTAATCCCCAATCTGAGTaGACCAGGACAAGGTCCACA +
Preference number: 4 (lower is better)
Translates to: VIPTQRDRIKHASQKDWSNPQSE*TRTRST
Trigger: TGTGGACCTTGTCCTGGTCCACTCAGATTGGGGATT...AGACCAGTCTTTCTGGGAGGCATGTTTTATCCTATCCCTCTGCGTAGGAATAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp TCACTTCCCCAGCTTATTATCCAGAAATACTGGGAACATTCTGCCTTTCAGGCCACCTGGGCAATGAGCTaGTACATCATTCACTCGCAC +
Preference number: 4 (lower is better)
Translates to: SLPQLIIQKYWEHSAFQATWAMS*YIIHSH
Trigger: GTGCGAGTGAATGATGTACCAGCTCATTGCCCAGGT...GGCCTGAAAGGCAGAATGTTCCCAGTATTTCTGGATAATAAGCTGGGGAAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp CATTCTGGCTGCCATCAATCTCCTCCCAGTCCTCAATCAATTTCTTCTCAATTTGACCCTTGGAGGTACTaGAAAGAGCAGGAACCTGGG +
Preference number: 4 (lower is better)
Translates to: HSGCHQSPPSPQSISSQFDPWRY*KEQEPG
Trigger: CCCAGGTTCCTGCTCTTTCCAGTACCTCCAAGGGTC...AAATTGAGAAGAAATTGATTGAGGACTGGGAGGAGATTGATGGCAGCCAGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp CCTTCTATAAAAGAAGCTCAAAGCATTGTGGGTGGTCAATCCAGAGAATGCTTAGGAGCCAAGGCATCCTaGACGTGGACTTCCACATCC +
Preference number: 4 (lower is better)
Translates to: PSIKEAQSIVGGQSRECLGAKAS*TWTSTS
Trigger: GGATGTGGAAGTCCACGTCCAGGATGCCTTGGCTCC...TAAGCATTCTCTGGATTGACCACCCACAATGCTTTGAGCTTCTTTTATAGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp GCCAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATAGAGACGGAAATTCTGTaGAGACCAGCTGGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: AKIPCHMLEPGKLLKMFIETEIL*RPAGSG
Trigger: CCCACTGCCAGCTGGTCTCCACAGAATTTCCGTCTC...TATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp CCCGTACAAATGTGTGAATTTGGTGAAATTGCCTTTAACAACCTTACCAAATGTCCCGCATCGGGTATCTaGGGGGCTGGCAGGGTTTCA +
Preference number: 4 (lower is better)
Translates to: PVQMCEFGEIAFNNLTKCPASGI*GAGRVS
Trigger: TGAAACCCTGCCAGCCCCCCAGATACCCGATGCGGG...ACATTTGGTAAGGTTGTTAAAGGCAATTTCACCAAATTCACACATTTGTACGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp CTTCTTTCCTACTCCCCCATATCTGCTACTGGAACTTCCATTCCCAAAGATATCGACTGTGAAGAGGGATaGAGCATCCAGACAGGCTCA +
Preference number: 4 (lower is better)
Translates to: LLSYSPISATGTSIPKDIDCEEG*SIQTGS
Trigger: TGAGCCTGTCTGGATGCTCCATCCCTCTTCACAGTC...GATATCTTTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGAGTAGGAAAGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp TCTCATATAGTGGGTACCCCAAACTCACTAAAGGCAAAGCTTAAGCAACCATCCCCTGCGATGGGAAGATaGCCATTATCCGAGGCATCA +
Preference number: 4 (lower is better)
Translates to: SHIVGTPNSLKAKLKQPSPAMGR*PLSEAS
Trigger: TGATGCCTCGGATAATGGCCATCTTCCCATCGCAGG...GGATGGTTGCTTAAGCTTTGCCTTTAGTGAGTTTGGGGTACCCACTATATGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp ATGGCACACTGTTCCAATAATGGAACACTGGGCACATGGGAGTTATTTATATCCCCCTCCAGGCTAACCTaGCAGAGAATGGTGTGGTCT +
Preference number: 4 (lower is better)
Translates to: MAHCSNNGTLGTWELFISPSRLT*QRMVWS
Trigger: AGACCACACCATTCTCTGCCAGGTTAGCCTGGAGGG...GGATATAAATAACTCCCATGTGCCCAGTGTTCCATTATTGGAACAGTGTGCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp TCCCCCATATCTGCTACTGGAACTTCCATTCCCAAAGATATCCTGACTACGGACCAATATAGACTGACGTaGTGTTCTGTCCTCTCAGGC +
Preference number: 4 (lower is better)
Translates to: SPISATGTSIPKDILTTDQYRLT*CSVLSG
Trigger: GCCTGAGAGGACAGAACACCACGTCAGTCTATATTG...GTCCGTAGTCAGGATATCTTTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp CATTCTGGCTGCCATCAATCTCCTCCCAGTCCTCAATCAATTTCTTCTCAATTTACCAGCTGTGAGTCCTaGACCATCTCCGGCAGAACT +
Preference number: 4 (lower is better)
Translates to: HSGCHQSPPSPQSISSQFTSCES*TISGRT
Trigger: AGTTCTGCCGGAGATGGTCCAGGACTCACAGCTGGT...AAATTGAGAAGAAATTGATTGAGGACTGGGAGGAGATTGATGGCAGCCAGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp CAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATAGCACCAGCTGTGAGTCCTaGACCATCTCCGGCAGAACT +
Preference number: 4 (lower is better)
Translates to: QNSMPHARAWQVTEDVYSTSCES*TISGRT
Trigger: AGTTCTGCCGGAGATGGTCCAGGACTCACAGCTGGT...GCTATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp TCTCATATAGTGGGTACCCCAAACTCACTAAAGGCAAAGCTTAAGCAACCATCCGAGCTCGATGGGTCCTaGGGCCATGAAAATCAGCTT +
Preference number: 4 (lower is better)
Translates to: SHIVGTPNSLKAKLKQPSELDGS*GHENQL
Trigger: AAGCTGATTTTCATGGCCCCAGGACCCATCGAGCTC...GGATGGTTGCTTAAGCTTTGCCTTTAGTGAGTTTGGGGTACCCACTATATGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp TCACTTCCCCAGCTTATTATCCAGAAATACTGGGAACATTCTGCCTTTCAGGCCACTGTGTCTAGGGCATaGGCAGTTGCTCTAAGACAG +
Preference number: 4 (lower is better)
Translates to: SLPQLIIQKYWEHSAFQATVSRA*AVALRQ
Trigger: CTGTCTTAGAGCAACTGCCCATGCCCTAGACACAGT...GGCCTGAAAGGCAGAATGTTCCCAGTATTTCTGGATAATAAGCTGGGGAAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp TTGAGGGTCAATAAGGCTCTGGGGGAACCAATTCCTCAAATCACACTGTATCTGGTCATCCCCAGGGCCTaGAATGGTATTGTTGTATCC +
Preference number: 4 (lower is better)
Translates to: LRVNKALGEPIPQITLYLVIPRA*NGIVVS
Trigger: GGATACAACAATACCATTCCAGGCCCTGGGGATGAC...CAGATACAGTGTGATTTGAGGAATTGGTTCCCCCAGAGCCTTATTGACCCTCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp GTTATTCCTACGCAGAGGGATAGGATAAAACATGCCTCCCAGAAAGACTGGTCTAGGACTATTTTGTCATaGGGGCGCCAATCCACTGCA +
Preference number: 4 (lower is better)
Translates to: VIPTQRDRIKHASQKDWSRTILS*GRQSTA
Trigger: TGCAGTGGATTGGCGCCCCCATGACAAAATAGTCCT...AGACCAGTCTTTCTGGGAGGCATGTTTTATCCTATCCCTCTGCGTAGGAATAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp CCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATTCAGGGCAATTCGACCTCCTCTTaGATTGGAGGGAGCTCTATC +
Preference number: 4 (lower is better)
Translates to: PCRHNSCLPVLLIELIQGNSTSS*IGGSSI
Trigger: GATAGAGCTCCCTCCAATCCAAGAGGAGGTCGAATT...GCCCTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp CCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATTCAGGGCCTGAGCGTATTTCAATaGGCTCCTCTCCTTGTAGGA +
Preference number: 4 (lower is better)
Translates to: PCRHNSCLPVLLIELIQGLSVFQ*APLLVG
Trigger: TCCTACAAGGAGAGGAGCCCATTGAAATACGCTCAG...GCCCTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp TCCTGCGATCTTTTCTTTACATGCTTGGAGCATAAGGCCTTCTGGATCCAGAGCCAATTGTGGCTGCACTaGAAGCTCATTTCCCACTTC +
Preference number: 4 (lower is better)
Translates to: SCDLFFTCLEHKAFWIQSQLWLH*KLISHF
Trigger: GAAGTGGGAAATGAGCTTCCAGTGCAGCCACAATTG...GCTCTGGATCCAGAAGGCCTTATGCTCCAAGCATGTAAAGAAAAGATCGCAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp GACATGAATGAACATAGAGCTGCTCTCTTTGCTTTTGGTGTTTCCCTAATTCTCAACTGGTGGGGGCACTaGTTCACCTTGCCCAGCATG +
Preference number: 4 (lower is better)
Translates to: DMNEHRAALFAFGVSLILNWWGH*FTLPSM
Trigger: CATGCTGGGCAAGGTGAACCAGTGCCCCCACCAGTT...GAGAATTAGGGAAACACCAAAAGCAAAGAGAGCAGCTCTATGTTCATTCATGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp GCCAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATACTGAGCAACTGCTCTTaGCCCTCCTTCCAGTTCCCA +
Preference number: 4 (lower is better)
Translates to: AKIPCHMLEPGKLLKMFILSNCS*PSFQFP
Trigger: TGGGAACTGGAAGGAGGGCCAAGAGCAGTTGCTCAG...TATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp GATGTTTATAGCTGCTATTTAGGCCCAAAGAGTCAATTCTGGCCTCAGGGATCAGAGGCTTTCTTCTCTTaGGAAAGCCCCAAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: DVYSCYLGPKSQFWPQGSEAFFS*ESPKLP
Trigger: TGGCAGCTTGGGGCTTTCCCAAGAGAAGAAAGCCTC...TGATCCCTGAGGCCAGAATTGACTCTTTGGGCCTAAATAGCAGCTATAAACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp ATGCCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATTCAGACTGTTCTTGGTCCTTaGTGGCCTCACTGGGCAGTA +
Preference number: 4 (lower is better)
Translates to: MPCRHNSCLPVLLIELIQTVLGP*WPHWAV
Trigger: TACTGCCCAGTGAGGCCACCAAGGACCAAGAACAGT...CTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp TCTCATATAGTGGGTACCCCAAACTCACTAAAGGCAAAGCTTAAGCAACCATCCGTTCCTCTGACCAACTaGAATGCAAGGAAGCTTGGC +
Preference number: 4 (lower is better)
Translates to: SHIVGTPNSLKAKLKQPSVPLTN*NARKLG
Trigger: GCCAAGCTTCCTTGCATTTCAGTTGGTCAGAGGAAC...GGATGGTTGCTTAAGCTTTGCCTTTAGTGAGTTTGGGGTACCCACTATATGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp GACATGAATGAACATAGAGCTGCTCTCTTTGCTTTTGGTGTTTCCCTAATTCTCCCCGTAGGTAAGTGGTaGCCACATCAGGATTCAGCC +
Preference number: 4 (lower is better)
Translates to: DMNEHRAALFAFGVSLILPVGKW*PHQDSA
Trigger: GGCTGAATCCTGATGTGGTCACCACTTACCTACGGG...GAGAATTAGGGAAACACCAAAAGCAAAGAGAGCAGCTCTATGTTCATTCATGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp ATGGCACACTGTTCCAATAATGGAACACTGGGCACATGGGAGTTATTTATATCCCCCCAGAAGGATGACTaGGTTGGAGAGGTTACTTCC +
Preference number: 4 (lower is better)
Translates to: MAHCSNNGTLGTWELFISPQKDD*VGEVTS
Trigger: GGAAGTAACCTCTCCAACTCAGTCATCCTTCTGGGG...GGATATAAATAACTCCCATGTGCCCAGTGTTCCATTATTGGAACAGTGTGCCAT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp CCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATTCAGGGCTTGCCTCTTCCCTTATaGAAAGAGTGCAATTCCCCT +
Preference number: 4 (lower is better)
Translates to: PCRHNSCLPVLLIELIQGLPLPL*KECNSP
Trigger: AGGGGAATTGCACTCTTTTCATAAGGGAAGAGGCAA...GCCCTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp CCTTCTATAAAAGAAGCTCAAAGCATTGTGGGTGGTCAATCCAGAGAATGCTTAGTGGTGGCTAACCTCTaGCCCCTAATCAGCACAGTG +
Preference number: 4 (lower is better)
Translates to: PSIKEAQSIVGGQSRECLVVANL*PLISTV
Trigger: CACTGTGCTGATTAGGGGTCAGAGGTTAGCCACCAC...TAAGCATTCTCTGGATTGACCACCCACAATGCTTTGAGCTTCTTTTATAGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp TCTCATATAGTGGGTACCCCAAACTCACTAAAGGCAAAGCTTAAGCAACCATCCAATGTTTGCAGCTCCTaGGATCTGGGCCACTGCAAA +
Preference number: 4 (lower is better)
Translates to: SHIVGTPNSLKAKLKQPSNVCSS*DLGHCK
Trigger: TTTGCAGTGGCCCAGATCTCAGGAGCTGCAAACATT...GGATGGTTGCTTAAGCTTTGCCTTTAGTGAGTTTGGGGTACCCACTATATGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp CCTTCTATAAAAGAAGCTCAAAGCATTGTGGGTGGTCAATCCAGAGAATGCTTAGGCCATTCTCCACTGTaGCGTTGTCGCCATCTTGTG +
Preference number: 4 (lower is better)
Translates to: PSIKEAQSIVGGQSRECLGHSPL*RCRHLV
Trigger: CACAAGATGGCGACAACGTCACAGTGGAGAATGGCC...TAAGCATTCTCTGGATTGACCACCCACAATGCTTTGAGCTTCTTTTATAGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp CATTCTGGCTGCCATCAATCTCCTCCCAGTCCTCAATCAATTTCTTCTCAATTTAACTCCCGTAGAGTGTaGTCTGAGCTCTGCCTTGGA +
Preference number: 4 (lower is better)
Translates to: HSGCHQSPPSPQSISSQFNSRRV*SELCLG
Trigger: TCCAAGGCAGAGCTCAGATCACACTCTACGGGAGTT...AAATTGAGAAGAAATTGATTGAGGACTGGGAGGAGATTGATGGCAGCCAGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp CAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATAGCATTGGCCTCCTGGCATaGAACAAGCAGCTTCTCCCT +
Preference number: 4 (lower is better)
Translates to: QNSMPHARAWQVTEDVYSIGLLA*NKQLLP
Trigger: AGGGAGAAGCTGCTTGTTTCATGCCAGGAGGCCAAT...GCTATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp ACACTGGGCACATGGGAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGGTGCAATGTTCTGAGTaGAGGAAAGAAGCGGAGCTT +
Preference number: 4 (lower is better)
Translates to: TLGTWELFISYCLRSWPRVQCSE*RKEAEL
Trigger: AAGCTCCGCTTCTTTCCTTCACTCAGAACATTGCAC...CCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTCCCATGTGCCCAGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp TCCTGCGATCTTTTCTTTACATGCTTGGAGCATAAGGCCTTCTGGATCCAGAGCCCCTTGTGGGCAAAATaGCCAAGTAATAAGCTGTCA +
Preference number: 4 (lower is better)
Translates to: SCDLFFTCLEHKAFWIQSPLWAK*PSNKLS
Trigger: TGACAGCTTATTACTTGGTCATTTTGCCCACAAGGG...GCTCTGGATCCAGAAGGCCTTATGCTCCAAGCATGTAAAGAAAAGATCGCAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp CCATCCTCTTCTTTCCTACTCCCCCATATCTGCTACTGGAACTTCCATTCCCAAGTTCTCAGATTGCAATaGGTAGGTCTCTTGGTCCAA +
Preference number: 4 (lower is better)
Translates to: PSSSFLLPHICYWNFHSQVLRLQ*VGLLVQ
Trigger: TTGGACCAAGAGACCTACTCATTGCAATCTGAGAAC...TTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGAGTAGGAAAGAAGAGGATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp GCCAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATAGCCTCAGCTGGCTATTaGAGAACCAGTCACAGCCTT +
Preference number: 4 (lower is better)
Translates to: AKIPCHMLEPGKLLKMFIASAGY*RTSHSL
Trigger: AAGGCTGTGACTGGTTCTTCAATAGCCAGCTGAGGC...TATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp TTGAGGGTCAATAAGGCTCTGGGGGAACCAATTCCTCAAATCACACTGTATCTGAACTTGGCCTTCACCTaGAACCAGATAGGTGAGTTG +
Preference number: 4 (lower is better)
Translates to: LRVNKALGEPIPQITLYLNLAFT*NQIGEL
Trigger: CAACTCACCTATCTGGTTTCAGGTGAAGGCCAAGTT...CAGATACAGTGTGATTTGAGGAATTGGTTCCCCCAGAGCCTTATTGACCCTCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp GAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGTCTGATTTTGCAATTGCTCCCCGCCTGCAATaGCCATGCATGCCACACTCA +
Preference number: 4 (lower is better)
Translates to: ELFISYCLRSWPRSDFAIAPRLQ*PCMPHS
Trigger: TGAGTGTGGCATGCATGGTCATTGCAGGCGGGGAGC...AATTGCAAAATCAGACCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp TCACTTCCCCAGCTTATTATCCAGAAATACTGGGAACATTCTGCCTTTCAGGCCACAAAAGACTCCCTCTaGGGCTCTAAGGAGAATCAG +
Preference number: 4 (lower is better)
Translates to: SLPQLIIQKYWEHSAFQATKDSL*GSKENQ
Trigger: CTGATTCTCCTTAGAGCCTCAGAGGGAGTCTTTTGT...GGCCTGAAAGGCAGAATGTTCCCAGTATTTCTGGATAATAAGCTGGGGAAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp TCTCATATAGTGGGTACCCCAAACTCACTAAAGGCAAAGCTTAAGCAACCATCCGTCGGCCATCCTCCGTaGCATGTACACTTCCAATAT +
Preference number: 4 (lower is better)
Translates to: SHIVGTPNSLKAKLKQPSVGHPP*HVHFQY
Trigger: ATATTGGAAGTGTACATGTCACGGAGGATGGCCGAC...GGATGGTTGCTTAAGCTTTGCCTTTAGTGAGTTTGGGGTACCCACTATATGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp ATAGTGGGTACCCCAAACTCACTAAAGGCAAAGCTTAAGCAACCATCCTCTTCTCAGTCTCCCCCTACATaGTACGTCAGGCTGAATTTG +
Preference number: 4 (lower is better)
Translates to: IVGTPNSLKAKLKQPSSSQSPPT*YVRLNL
Trigger: CAAATTCAGCCTGACGTATCATGTAGGGGGAGACTG...AGAAGAGGATGGTTGCTTAAGCTTTGCCTTTAGTGAGTTTGGGGTACCCACTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp GATGTTTATAGCTGCTATTTAGGCCCAAAGAGTCAATTCTGGCCTCAGGGATCATTACCTGGTTCACTTTaGTTCCCGCCACCCAAATGG +
Preference number: 4 (lower is better)
Translates to: DVYSCYLGPKSQFWPQGSLPGSL*FPPPKW
Trigger: CCATTTGGGTGGCGGGAATCAAAGTGAACCAGGTAA...TGATCCCTGAGGCCAGAATTGACTCTTTGGGCCTAAATAGCAGCTATAAACATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp TCCATTCCCAAAGATATCCTGACTACGGACAATGGTGTCACTGTTGACACCCTCGGCTTCACTTTGTCCTaGATGCAGTCAAAAGAAGAG +
Preference number: 4 (lower is better)
Translates to: SIPKDILTTDNGVTVDTLGFTLS*MQSKEE
Trigger: CTCTTCTTTTGACTGCATTCAGGACAAAGTGAAGCC...GAGGGTGTCAACAGTGACACCATTGTCCGTAGTCAGGATATCTTTGGGAATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp TGGGAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGTCTGATTTTGCACAATGGTGTCACTGTTaGCACCCTCTCCACAGTCCC +
Preference number: 4 (lower is better)
Translates to: WELFISYCLRSWPRSDFAQWCHC*HPLHSP
Trigger: GGGACTGTGGAGAGGGTGTCAACAGTGACACCATTG...TGCAAAATCAGACCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp CAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATAGCTCCGGGTGTACTGAATaGAGGCAGAATGCCTCAGTG +
Preference number: 4 (lower is better)
Translates to: QNSMPHARAWQVTEDVYSSGCTE*RQNASV
Trigger: CACTGAGGCATTCTGCCTTCATTCAGTACACCCGGA...GCTATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp GTTATTCCTACGCAGAGGGATAGGATAAAACATGCCTCCCAGAAAGACTGGTCTACAGATAGCCTGGATTaGAATCTCCTGGAGAGCACT +
Preference number: 4 (lower is better)
Translates to: VIPTQRDRIKHASQKDWSTDSLD*NLLEST
Trigger: AGTGCTCTCCAGGAGATTTCAATCCAGGCTATCTGT...AGACCAGTCTTTCTGGGAGGCATGTTTTATCCTATCCCTCTGCGTAGGAATAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp TGGGAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGTCTGATTTTGCAGTCCTGGATTTGGACTaGTTACCAGCTGTCCCCCGA +
Preference number: 4 (lower is better)
Translates to: WELFISYCLRSWPRSDFAVLDLD*LPAVPR
Trigger: TCGGGGGACAGCTGGTAAGCAGTCCAAATCCAGGAC...TGCAAAATCAGACCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR GCA 90 bp CCTTCTATAAAAGAAGCTCAAAGCATTGTGGGTGGTCAATCCAGAGAATGCTTAGTCCTGGATTTGGACTaGTTACCAGCTGTCCCCCGA +
Preference number: 4 (lower is better)
Translates to: PSIKEAQSIVGGQSRECLVLDLD*LPAVPR
Trigger: TCGGGGGACAGCTGGTAAGCAGTCCAAATCCAGGAC...TAAGCATTCTCTGGATTGACCACCCACAATGCTTTGAGCTTCTTTTATAGAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp GAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGTCTGATTTTGCAATTCTGATTCCACCAGATTaGCCCCTGGGCGAGCCGTTC +
Preference number: 4 (lower is better)
Translates to: ELFISYCLRSWPRSDFAILIPPD*PLGEPF
Trigger: GAACGGCTCGCCCAGGGGGCAATCTGGTGGAATCAG...AATTGCAAAATCAGACCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR GCA 90 bp TCCTGCGATCTTTTCTTTACATGCTTGGAGCATAAGGCCTTCTGGATCCAGAGCCCCTGGGTGGAACTTTaGACTGAATTCTGCTTGAAT +
Preference number: 4 (lower is better)
Translates to: SCDLFFTCLEHKAFWIQSPWVEL*TEFCLN
Trigger: ATTCAAGCAGAATTCAGTGCAAAGTTCCACCCAGGG...GCTCTGGATCCAGAAGGCCTTATGCTCCAAGCATGTAAAGAAAAGATCGCAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp ATGCCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATTCAGTGTCACAGGACCGATTaGCCACAAGTACCCAAACCA +
Preference number: 4 (lower is better)
Translates to: MPCRHNSCLPVLLIELIQCHRTD*PQVPKP
Trigger: TGGTTTGGGTACTTGTGGGCAATCGGTCCTGTGACA...CTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp CCATCCTCTTCTTTCCTACTCCCCCATATCTGCTACTGGAACTTCCATTCCCAAAGTGACTACTGGTGTTaGTGCCGCTTCATACATGAA +
Preference number: 4 (lower is better)
Translates to: PSSSFLLPHICYWNFHSQSDYWC*CRFIHE
Trigger: TTCATGTATGAAGCGGCAGCAACACCAGTAGTCACT...TTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGAGTAGGAAAGAAGAGGATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR GCA 90 bp TTGAGGGTCAATAAGGCTCTGGGGGAACCAATTCCTCAAATCACACTGTATCTGTTACTTCCTCCCACATaGAGGCTCAGGCTGCTATTT +
Preference number: 4 (lower is better)
Translates to: LRVNKALGEPIPQITLYLLLPPT*RLRLLF
Trigger: AAATAGCAGCCTGAGCCTGCATGTGGGAGGAAGTAA...CAGATACAGTGTGATTTGAGGAATTGGTTCCCCCAGAGCCTTATTGACCCTCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR GCA 90 bp CCTTCTATAAAAGAAGCTCAAAGCATTGTGGGTGGTCAATCCAGAGAATGCTTACAGACAGGCTCACGTTaGCCTGGAAGGACTGTGTCT +
Preference number: 4 (lower is better)
Translates to: PSIKEAQSIVGGQSRECLQTGSR*PGRTVS
Trigger: AGACACAGTCCTTCCAGGGCAACGTGAGCCTGTCTG...TAAGCATTCTCTGGATTGACCACCCACAATGCTTTGAGCTTCTTTTATAGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp TCTCATATAGTGGGTACCCCAAACTCACTAAAGGCAAAGCTTAAGCAACCATCCCTTGGAGAGGATAGATaGCAGCCTCCAGACTGTGAA +
Preference number: 4 (lower is better)
Translates to: SHIVGTPNSLKAKLKQPSLGEDR*QPPDCE
Trigger: TTCACAGTCTGGAGGCTGGCATCTATCCTCTCCAAG...GGATGGTTGCTTAAGCTTTGCCTTTAGTGAGTTTGGGGTACCCACTATATGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR GCA 90 bp GATGTTTATAGCTGCTATTTAGGCCCAAAGAGTCAATTCTGGCCTCAGGGATCATATCCGAGGCATCACTaGAAATTGCTGGAGCACCAC +
Preference number: 4 (lower is better)
Translates to: DVYSCYLGPKSQFWPQGSYPRHH*KLLEHH
Trigger: GTGGTGCTCCAGCAATTTGCAGTGATGCCTCGGATA...TGATCCCTGAGGCCAGAATTGACTCTTTGGGCCTAAATAGCAGCTATAAACATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp AGCCTGAAGATCTGCAATACTCACCAGATGCCTAAAGAAGAGGTTAAAACATTTGTCCTCTCAGGCCTGTaGCCTCTATGGTCAAGAGGC +
Preference number: 4 (lower is better)
Translates to: SLKICNTHQMPKEEVKTFVLSGL*PLWSRG
Trigger: GCCTCTTGACCATAGAGGGCACAGGCCTGAGAGGAC...AAATGTTTTAACCTCTTCTTTAGGCATCTGGTGAGTATTGCAGATCTTCAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp ATGCCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATTCAGCACGATTCAAGCAGTTaGTCTGTCGCCATGGCAACT +
Preference number: 4 (lower is better)
Translates to: MPCRHNSCLPVLLIELIQHDSSS*SVAMAT
Trigger: AGTTGCCATGGCGACAGAGCAACTGCTTGAATCGTG...CTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp GTTATTCCTACGCAGAGGGATAGGATAAAACATGCCTCCCAGAAAGACTGGTCTTATATCTCATCTCCGTaGATGTCCCAACTAGCAGCG +
Preference number: 4 (lower is better)
Translates to: VIPTQRDRIKHASQKDWSYISSP*MSQLAA
Trigger: CGCTGCTAGTTGGGACATGCACGGAGATGAGATATA...AGACCAGTCTTTCTGGGAGGCATGTTTTATCCTATCCCTCTGCGTAGGAATAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp TTGAGGGTCAATAAGGCTCTGGGGGAACCAATTCCTCAAATCACACTGTATCTGCCACACTCAGAACATTaGTTCTGTCCACAGGGAAGT +
Preference number: 4 (lower is better)
Translates to: LRVNKALGEPIPQITLYLPHSEH*FCPQGS
Trigger: ACTTCCCTGTGGACAGAAGCAATGTTCTGAGTGTGG...CAGATACAGTGTGATTTGAGGAATTGGTTCCCCCAGAGCCTTATTGACCCTCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR GCA 90 bp ATGCCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATTCAGCCGCCACAGCTCTGGTaGAGAGTAGATGATATGATC +
Preference number: 4 (lower is better)
Translates to: MPCRHNSCLPVLLIELIQPPQLW*RVDDMI
Trigger: GATCATATCATCTACTCTGCACCAGAGCTGTGGCGG...CTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp TCCTGCGATCTTTTCTTTACATGCTTGGAGCATAAGGCCTTCTGGATCCAGAGCCCCAGAGATCAAGACTaGCAAGTTGTAGAAGCTAAC +
Preference number: 4 (lower is better)
Translates to: SCDLFFTCLEHKAFWIQSPRDQD*QVVEAN
Trigger: GTTAGCTTCTACAACTTGGCAGTCTTGATCTCTGGG...GCTCTGGATCCAGAAGGCCTTATGCTCCAAGCATGTAAAGAAAAGATCGCAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp ATGGCACACTGTTCCAATAATGGAACACTGGGCACATGGGAGTTATTTATATCCTCGTGGTCCTGGATTTaGACTGCTTACCAGCTGTCC +
Preference number: 4 (lower is better)
Translates to: MAHCSNNGTLGTWELFISSWSWI*TAYQLS
Trigger: GGACAGCTGGTAAGCAGTCCAAATCCAGGACCACGA...GGATATAAATAACTCCCATGTGCCCAGTGTTCCATTATTGGAACAGTGTGCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp GACATGAATGAACATAGAGCTGCTCTCTTTGCTTTTGGTGTTTCCCTAATTCTCCCTCACATCTTTTCCTaGAGCCCGAGTGGTGCACTC +
Preference number: 4 (lower is better)
Translates to: DMNEHRAALFAFGVSLILPHIFS*SPSGAL
Trigger: GAGTGCACCACTCGGGCTCCAGGAAAAGATGTGAGG...GAGAATTAGGGAAACACCAAAAGCAAAGAGAGCAGCTCTATGTTCATTCATGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp GAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGTCTGATTTTGCAATTAAGCCCTCGATTGCCTaGCTGAGGGGTGGTGAGCCT +
Preference number: 4 (lower is better)
Translates to: ELFISYCLRSWPRSDFAIKPSIA*LRGGEP
Trigger: AGGCTCACCACCCCTCAGCCAGGCAATCGAGGGCTT...AATTGCAAAATCAGACCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp TTGAGGGTCAATAAGGCTCTGGGGGAACCAATTCCTCAAATCACACTGTATCTGGGCATTTGCAGGGATTaGCTGACTAGAGACATTGTC +
Preference number: 4 (lower is better)
Translates to: LRVNKALGEPIPQITLYLGICRD*LTRDIV
Trigger: GACAATGTCTCTAGTCAGCCAATCCCTGCAAATGCC...CAGATACAGTGTGATTTGAGGAATTGGTTCCCCCAGAGCCTTATTGACCCTCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp TCCCCCATATCTGCTACTGGAACTTCCATTCCCAAAGATATCCTGACTACGGACAGAGTTGGAAACTTCTaGGCCTCGTTCAAATCCAAG +
Preference number: 4 (lower is better)
Translates to: SPISATGTSIPKDILTTDRVGNF*ASFKSK
Trigger: CTTGGATTTGAACGAGGCCCAGAAGTTTCCAACTCT...GTCCGTAGTCAGGATATCTTTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp ATGGCACACTGTTCCAATAATGGAACACTGGGCACATGGGAGTTATTTATATCCGGTCCCCATCAGAGTTaGAAACTTCTGGGCCTCGTT +
Preference number: 4 (lower is better)
Translates to: MAHCSNNGTLGTWELFISGPHQS*KLLGLV
Trigger: AACGAGGCCCAGAAGTTTCCAACTCTGATGGGGACC...GGATATAAATAACTCCCATGTGCCCAGTGTTCCATTATTGGAACAGTGTGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp GAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGTCTGATTTTGCAATTAACAGGCCCGTCTCCTaGGCCAGAGGGAGAAGGTTG +
Preference number: 4 (lower is better)
Translates to: ELFISYCLRSWPRSDFAINRPVS*ARGRRL
Trigger: CAACCTTCTCCCTCTGGCCCAGGAGACGGGCCTGTT...AATTGCAAAATCAGACCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp ATAGTGGGTACCCCAAACTCACTAAAGGCAAAGCTTAAGCAACCATCCTCTTCTACCTGGGCAATGAGCTaGTACATCATTCACTCGCAC +
Preference number: 4 (lower is better)
Translates to: IVGTPNSLKAKLKQPSSSTWAMS*YIIHSH
Trigger: GTGCGAGTGAATGATGTACCAGCTCATTGCCCAGGT...AGAAGAGGATGGTTGCTTAAGCTTTGCCTTTAGTGAGTTTGGGGTACCCACTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp GATGTTTATAGCTGCTATTTAGGCCCAAAGAGTCAATTCTGGCCTCAGGGATCAGAAAGAGCAGGAACCTaGGCAATGAGCTGGTACATC +
Preference number: 4 (lower is better)
Translates to: DVYSCYLGPKSQFWPQGSERAGT*AMSWYI
Trigger: GATGTACCAGCTCATTGCCCAGGTTCCTGCTCTTTC...TGATCCCTGAGGCCAGAATTGACTCTTTGGGCCTAAATAGCAGCTATAAACATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp TCTCATATAGTGGGTACCCCAAACTCACTAAAGGCAAAGCTTAAGCAACCATCCCAATATCCGCAGCTCTaGAAGGCTCCACCATATCCA +
Preference number: 4 (lower is better)
Translates to: SHIVGTPNSLKAKLKQPSQYPQL*KAPPYP
Trigger: TGGATATGGTGGAGCCTTCCAGAGCTGCGGATATTG...GGATGGTTGCTTAAGCTTTGCCTTTAGTGAGTTTGGGGTACCCACTATATGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp GATGTTTATAGCTGCTATTTAGGCCCAAAGAGTCAATTCTGGCCTCAGGGATCACAATATCCGCAGCTCTaGAAGGCTCCACCATATCCA +
Preference number: 4 (lower is better)
Translates to: DVYSCYLGPKSQFWPQGSQYPQL*KAPPYP
Trigger: TGGATATGGTGGAGCCTTCCAGAGCTGCGGATATTG...TGATCCCTGAGGCCAGAATTGACTCTTTGGGCCTAAATAGCAGCTATAAACATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp ATAGTGGGTACCCCAAACTCACTAAAGGCAAAGCTTAAGCAACCATCCTCTTCTGTGAGGTACTGGATGTaGAGATCAACCCCTTGTGAG +
Preference number: 4 (lower is better)
Translates to: IVGTPNSLKAKLKQPSSSVRYWM*RSTPCE
Trigger: CTCACAAGGGGTTGATCTCCACATCCAGTACCTCAC...AGAAGAGGATGGTTGCTTAAGCTTTGCCTTTAGTGAGTTTGGGGTACCCACTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp GATGTTTATAGCTGCTATTTAGGCCCAAAGAGTCAATTCTGGCCTCAGGGATCACATGGCAGTGACTACTaGTGTTGCTGCCGCTTCATA +
Preference number: 4 (lower is better)
Translates to: DVYSCYLGPKSQFWPQGSHGSDY*CCCRFI
Trigger: TATGAAGCGGCAGCAACACCAGTAGTCACTGCCATG...TGATCCCTGAGGCCAGAATTGACTCTTTGGGCCTAAATAGCAGCTATAAACATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp GCCAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATAAGGCTCACGTTGCCCTaGAAGGACTGTGTCTCAACA +
Preference number: 4 (lower is better)
Translates to: AKIPCHMLEPGKLLKMFIRLTLP*KDCVST
Trigger: TGTTGAGACACAGTCCTTCCAGGGCAACGTGAGCCT...TATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp GCCAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATAGACTGTGAAGAGGGATaGAGCATCCAGACAGGCTCA +
Preference number: 4 (lower is better)
Translates to: AKIPCHMLEPGKLLKMFIDCEEG*SIQTGS
Trigger: TGAGCCTGTCTGGATGCTCCATCCCTCTTCACAGTC...TATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp TGGGAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGTCTGATTTTGCATGCCGAACCCTGCGATaGGAAGATGGCCATTATCCG +
Preference number: 4 (lower is better)
Translates to: WELFISYCLRSWPRSDFACRTLR*EDGHYP
Trigger: CGGATAATGGCCATCTTCCCATCGCAGGGTTCGGCA...TGCAAAATCAGACCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp AGCCTGAAGATCTGCAATACTCACCAGATGCCTAAAGAAGAGGTTAAAACATTTTCGGCTCATCAGCTGTaGTGGCTAACCTCTGACCCC +
Preference number: 4 (lower is better)
Translates to: SLKICNTHQMPKEEVKTFSAHQL*WLTSDP
Trigger: GGGGTCAGAGGTTAGCCACCACAGCTGATGAGCCGA...AAATGTTTTAACCTCTTCTTTAGGCATCTGGTGAGTATTGCAGATCTTCAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp CCTTCTATAAAAGAAGCTCAAAGCATTGTGGGTGGTCAATCCAGAGAATGCTTAGCACATAGGTGTGTCTaGCAGCCTCACAGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: PSIKEAQSIVGGQSRECLAHRCV*QPHSCP
Trigger: AGGACAGCTGTGAGGCTGCCAGACACACCTATGTGC...TAAGCATTCTCTGGATTGACCACCCACAATGCTTTGAGCTTCTTTTATAGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp ACACTGGGCACATGGGAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGGTTGCTCTGTCGCCATaGCAACTGTCAAATCACACT +
Preference number: 4 (lower is better)
Translates to: TLGTWELFISYCLRSWPRVALSP*QLSNHT
Trigger: AGTGTGATTTGACAGTTGCCATGGCGACAGAGCAAC...CCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTCCCATGTGCCCAGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp TCACTTCCCCAGCTTATTATCCAGAAATACTGGGAACATTCTGCCTTTCAGGCCGTTGCTCTGTCGCCATaGCAACTGTCAAATCACACT +
Preference number: 4 (lower is better)
Translates to: SLPQLIIQKYWEHSAFQAVALSP*QLSNHT
Trigger: AGTGTGATTTGACAGTTGCCATGGCGACAGAGCAAC...GGCCTGAAAGGCAGAATGTTCCCAGTATTTCTGGATAATAAGCTGGGGAAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp GTTATTCCTACGCAGAGGGATAGGATAAAACATGCCTCCCAGAAAGACTGGTCTGGCACAAAGAGGCATTaGGAACTTTCCTCGCAAATG +
Preference number: 4 (lower is better)
Translates to: VIPTQRDRIKHASQKDWSGTKRH*ELSSQM
Trigger: CATTTGCGAGGAAAGTTCCCAATGCCTCTTTGTGCC...AGACCAGTCTTTCTGGGAGGCATGTTTTATCCTATCCCTCTGCGTAGGAATAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp TCTCATATAGTGGGTACCCCAAACTCACTAAAGGCAAAGCTTAAGCAACCATCCGTTGTCGCCATCTTGTaGCAGCCTTTCAGGAAACCA +
Preference number: 4 (lower is better)
Translates to: SHIVGTPNSLKAKLKQPSVVAIL*QPFRKP
Trigger: TGGTTTCCTGAAAGGCTGCCACAAGATGGCGACAAC...GGATGGTTGCTTAAGCTTTGCCTTTAGTGAGTTTGGGGTACCCACTATATGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp TCTCATATAGTGGGTACCCCAAACTCACTAAAGGCAAAGCTTAAGCAACCATCCACTGTGTCTAGGGCATaGGCAGTTGCTCTAAGACAG +
Preference number: 4 (lower is better)
Translates to: SHIVGTPNSLKAKLKQPSTVSRA*AVALRQ
Trigger: CTGTCTTAGAGCAACTGCCCATGCCCTAGACACAGT...GGATGGTTGCTTAAGCTTTGCCTTTAGTGAGTTTGGGGTACCCACTATATGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp GCCAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATAGGAGCATTGGCCTCCTaGCATGAAACAAGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: AKIPCHMLEPGKLLKMFIGALAS*HETSSF
Trigger: GAAGCTGCTTGTTTCATGCCAGGAGGCCAATGCTCC...TATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp CCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATTCAGGGCAATCCACCTTGTCCTTaGGAACAGTCTGAACAGGTT +
Preference number: 4 (lower is better)
Translates to: PCRHNSCLPVLLIELIQGNPPCP*EQSEQV
Trigger: AACCTGTTCAGACTGTTCCCAAGGACAAGGTGGATT...GCCCTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp CTTCTTTCCTACTCCCCCATATCTGCTACTGGAACTTCCATTCCCAAAGATATCAGGACTATTTTGTCATaGGGGCGCCAATCCACTGCA +
Preference number: 4 (lower is better)
Translates to: LLSYSPISATGTSIPKDIRTILS*GRQSTA
Trigger: TGCAGTGGATTGGCGCCCCCATGACAAAATAGTCCT...GATATCTTTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGAGTAGGAAAGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp CCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATTCAGGGCTCTAAATCTATGCCATaGCCAGCTGTGCCAAACACA +
Preference number: 4 (lower is better)
Translates to: PCRHNSCLPVLLIELIQGSKSMP*PAVPNT
Trigger: TGTGTTTGGCACAGCTGGCCATGGCATAGATTTAGA...GCCCTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp ATAGTGGGTACCCCAAACTCACTAAAGGCAAAGCTTAAGCAACCATCCTCTTCTGCCACAACGTTGCCATaGAGGTTGATGTCCTTTACC +
Preference number: 4 (lower is better)
Translates to: IVGTPNSLKAKLKQPSSSATTLP*RLMSFT
Trigger: GGTAAAGGACATCAACCTCCATGGCAACGTTGTGGC...AGAAGAGGATGGTTGCTTAAGCTTTGCCTTTAGTGAGTTTGGGGTACCCACTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp CCATCCTCTTCTTTCCTACTCCCCCATATCTGCTACTGGAACTTCCATTCCCAAAGAAGCCAGAGATTCTaGTACAGTTGTCAAGTCCAC +
Preference number: 4 (lower is better)
Translates to: PSSSFLLPHICYWNFHSQRSQRF*YSCQVH
Trigger: GTGGACTTGACAACTGTACCAGAATCTCTGGCTTCT...TTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGAGTAGGAAAGAAGAGGATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp TTGAGGGTCAATAAGGCTCTGGGGGAACCAATTCCTCAAATCACACTGTATCTGAATTCGACCTCCTCTTaGATTGGAGGGAGCTCTATC +
Preference number: 4 (lower is better)
Translates to: LRVNKALGEPIPQITLYLNSTSS*IGGSSI
Trigger: GATAGAGCTCCCTCCAATCCAAGAGGAGGTCGAATT...CAGATACAGTGTGATTTGAGGAATTGGTTCCCCCAGAGCCTTATTGACCCTCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp TCTCATATAGTGGGTACCCCAAACTCACTAAAGGCAAAGCTTAAGCAACCATCCAAATACAGAAACTGGTaGAGGCAGACCCAGGGCTCT +
Preference number: 4 (lower is better)
Translates to: SHIVGTPNSLKAKLKQPSKYRNW*RQTQGS
Trigger: AGAGCCCTGGGTCTGCCTCCACCAGTTTCTGTATTT...GGATGGTTGCTTAAGCTTTGCCTTTAGTGAGTTTGGGGTACCCACTATATGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp TCCCCCATATCTGCTACTGGAACTTCCATTCCCAAAGATATCCTGACTACGGACCCCCATATCTGCTACTaGAACTTCCATTCCCAAAGA +
Preference number: 4 (lower is better)
Translates to: SPISATGTSIPKDILTTDPHICY*NFHSQR
Trigger: TCTTTGGGAATGGAAGTTCCAGTAGCAGATATGGGG...GTCCGTAGTCAGGATATCTTTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp CAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATAGCCCATTCATCAACTGGTaGGGGCACTGGTTCACCTTG +
Preference number: 4 (lower is better)
Translates to: QNSMPHARAWQVTEDVYSPFINW*GHWFTL
Trigger: CAAGGTGAACCAGTGCCCCCACCAGTTGATGAATGG...GCTATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp CATTCTGGCTGCCATCAATCTCCTCCCAGTCCTCAATCAATTTCTTCTCAATTTACCCATTTGTCTCCTTaGGCTTCCAAGATCACTGGG +
Preference number: 4 (lower is better)
Translates to: HSGCHQSPPSPQSISSQFTHLSP*ASKITG
Trigger: CCCAGTGATCTTGGAAGCTCAAGGAGACAAATGGGT...AAATTGAGAAGAAATTGATTGAGGACTGGGAGGAGATTGATGGCAGCCAGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp GATGTTTATAGCTGCTATTTAGGCCCAAAGAGTCAATTCTGGCCTCAGGGATCAAGGTTGTCCTTCCTGTaGCCAAAACCCAAATGGAGA +
Preference number: 4 (lower is better)
Translates to: DVYSCYLGPKSQFWPQGSRLSFL*PKPKWR
Trigger: TCTCCATTTGGGTTTTGGTCACAGGAAGGACAACCT...TGATCCCTGAGGCCAGAATTGACTCTTTGGGCCTAAATAGCAGCTATAAACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp CTTCTTTCCTACTCCCCCATATCTGCTACTGGAACTTCCATTCCCAAAGATATCGAAGTTTCCTCTGCCTaGTACATTCAGCACCTGTAC +
Preference number: 4 (lower is better)
Translates to: LLSYSPISATGTSIPKDIEVSSA*YIQHLY
Trigger: GTACAGGTGCTGAATGTATCAGGCAGAGGAAACTTC...GATATCTTTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGAGTAGGAAAGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp TCCCCCATATCTGCTACTGGAACTTCCATTCCCAAAGATATCCTGACTACGGACGTTCCAGAATCAGCTTaGGAAACTGTTACGTTTGTG +
Preference number: 4 (lower is better)
Translates to: SPISATGTSIPKDILTTDVPESA*ETVTFV
Trigger: CACAAACGTAACAGTTTCTCAAGCTGATTCTGGAAC...GTCCGTAGTCAGGATATCTTTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp GTTATTCCTACGCAGAGGGATAGGATAAAACATGCCTCCCAGAAAGACTGGTCTCAGAATAGTCCCCTCTaGTCACAGTCACATTCACAA +
Preference number: 4 (lower is better)
Translates to: VIPTQRDRIKHASQKDWSQNSPL*SQSHSQ
Trigger: TTGTGAATGTGACTGTGATCAGAGGGGACTATTCTG...AGACCAGTCTTTCTGGGAGGCATGTTTTATCCTATCCCTCTGCGTAGGAATAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp TTCAACACCACCAATTTAATATCTGAATTGCTCCTCTCTCATATAGTGGGTACCAAGCTGGGTCCCTGCTaGAGCCTATTCCTGAGATGC +
Preference number: 4 (lower is better)
Translates to: FNTTNLISELLLSHIVGTKLGPC*SLFLRC
Trigger: GCATCTCAGGAATAGGCTTCAGCAGGGACCCAGCTT...GGTACCCACTATATGAGAGAGGAGCAATTCAGATATTAAATTGGTGGTGTTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp GAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGTCTGATTTTGCAATTCTCCTTGCATGGCAGTaGCTACTGGTGTTGCTGCCG +
Preference number: 4 (lower is better)
Translates to: ELFISYCLRSWPRSDFAILLAWQ*LLVLLP
Trigger: CGGCAGCAACACCAGTAGTCACTGCCATGCAAGGAG...AATTGCAAAATCAGACCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp GATGTTTATAGCTGCTATTTAGGCCCAAAGAGTCAATTCTGGCCTCAGGGATCACTGGTCAATATAGACTaGCGTGGTGTTCTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: DVYSCYLGPKSQFWPQGSLVNID*RGVLSS
Trigger: AGAGGACAGAACACCACGTCAGTCTATATTGACCAG...TGATCCCTGAGGCCAGAATTGACTCTTTGGGCCTAAATAGCAGCTATAAACATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp TTGAGGGTCAATAAGGCTCTGGGGGAACCAATTCCTCAAATCACACTGTATCTGGACACCCACACAGGGTaGCATTCCTATAAAAATGTC +
Preference number: 4 (lower is better)
Translates to: LRVNKALGEPIPQITLYLDTHTG*HSYKNV
Trigger: GACATTTTTATAGGAATGTCACCCTGTGTGGGTGTC...CAGATACAGTGTGATTTGAGGAATTGGTTCCCCCAGAGCCTTATTGACCCTCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp CATTCTGGCTGCCATCAATCTCCTCCCAGTCCTCAATCAATTTCTTCTCAATTTACCACACACAGCAGCTaGGACATTCCCTGGAGAAAA +
Preference number: 4 (lower is better)
Translates to: HSGCHQSPPSPQSISSQFTTHSS*DIPWRK
Trigger: TTTTCTCCAGGGAATGTCTCAGCTGCTGTGTGTGGT...AAATTGAGAAGAAATTGATTGAGGACTGGGAGGAGATTGATGGCAGCCAGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp GATGTTTATAGCTGCTATTTAGGCCCAAAGAGTCAATTCTGGCCTCAGGGATCAATTGACTCTGCCCAATaGTCTGGCACAAAGAGGCAT +
Preference number: 4 (lower is better)
Translates to: DVYSCYLGPKSQFWPQGSIDSAQ*SGTKRH
Trigger: ATGCCTCTTTGTGCCAGATCATTGGGCAGAGTCAAT...TGATCCCTGAGGCCAGAATTGACTCTTTGGGCCTAAATAGCAGCTATAAACATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp TTCAACACCACCAATTTAATATCTGAATTGCTCCTCTCTCATATAGTGGGTACCGGCCATTCTCCACTGTaGCGTTGTCGCCATCTTGTG +
Preference number: 4 (lower is better)
Translates to: FNTTNLISELLLSHIVGTGHSPL*RCRHLV
Trigger: CACAAGATGGCGACAACGTCACAGTGGAGAATGGCC...GGTACCCACTATATGAGAGAGGAGCAATTCAGATATTAAATTGGTGGTGTTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp TGGGAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGTCTGATTTTGCAGGGAAAGAAGGGAGTTaGGTAGGAACTCCCGTAGAG +
Preference number: 4 (lower is better)
Translates to: WELFISYCLRSWPRSDFAGKEGS*VGTPVE
Trigger: CTCTACGGGAGTTCCTACTCAACTCCCTTCTTTCCC...TGCAAAATCAGACCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp CATTCTGGCTGCCATCAATCTCCTCCCAGTCCTCAATCAATTTCTTCTCAATTTTCCCACCAGAGTGAGTaGGCTCAGATGCTTATGGAA +
Preference number: 4 (lower is better)
Translates to: HSGCHQSPPSPQSISSQFSHQSE*AQMLME
Trigger: TTCCATAAGCATCTGAGCTCACTCACTCTGGTGGGA...AAATTGAGAAGAAATTGATTGAGGACTGGGAGGAGATTGATGGCAGCCAGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp CCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATTCAGGGCTATATTTCCATGTCCTaGCCAGTCATCTTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: PCRHNSCLPVLLIELIQGYISMS*PVIFPS
Trigger: GGAAGGAAAGATGACTGGTCAGGACATGGAAATATA...GCCCTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp TCACTTCCCCAGCTTATTATCCAGAAATACTGGGAACATTCTGCCTTTCAGGCCGACCAAACAAGAAGCTaGAAGGGTTTCCATAGAAGC +
Preference number: 4 (lower is better)
Translates to: SLPQLIIQKYWEHSAFQADQTRS*KGFHRS
Trigger: GCTTCTATGGAAACCCTTTCAGCTTCTTGTTTGGTC...GGCCTGAAAGGCAGAATGTTCCCAGTATTTCTGGATAATAAGCTGGGGAAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp CCATCCTCTTCTTTCCTACTCCCCCATATCTGCTACTGGAACTTCCATTCCCAACCAATAGACATACGATaGAAAAGAACACCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: PSSSFLLPHICYWNFHSQPIDIR*KRTPPP
Trigger: TGGAGGAGGTGTTCTTTTTCATCGTATGTCTATTGG...TTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGAGTAGGAAAGAAGAGGATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp TCCATTCCCAAAGATATCCTGACTACGGACAATGGTGTCACTGTTGACACCCTCACTGCAGAGATCTGTTaGTCCAAAGGTTCTCAGATT +
Preference number: 4 (lower is better)
Translates to: SIPKDILTTDNGVTVDTLTAEIC*SKGSQI
Trigger: AATCTGAGAACCTTTGGATCAACAGATCTCTGCAGT...GAGGGTGTCAACAGTGACACCATTGTCCGTAGTCAGGATATCTTTGGGAATGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp ATAGTGGGTACCCCAAACTCACTAAAGGCAAAGCTTAAGCAACCATCCTCTTCTTCACAGCCTTGGTTCTaGCCTGGTGATGGAAGAAAT +
Preference number: 4 (lower is better)
Translates to: IVGTPNSLKAKLKQPSSSSQPWF*PGDGRN
Trigger: ATTTCTTCCATCACCAGGTCAGAACCAAGGCTGTGA...AGAAGAGGATGGTTGCTTAAGCTTTGCCTTTAGTGAGTTTGGGGTACCCACTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp CATTCTGGCTGCCATCAATCTCCTCCCAGTCCTCAATCAATTTCTTCTCAATTTCTGAAACCAGATAGGTaGGTTGCCTCAGCTGGCTAT +
Preference number: 4 (lower is better)
Translates to: HSGCHQSPPSPQSISSQFLKPDR*VASAGY
Trigger: ATAGCCAGCTGAGGCAACTCACCTATCTGGTTTCAG...AAATTGAGAAGAAATTGATTGAGGACTGGGAGGAGATTGATGGCAGCCAGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp CATTCTGGCTGCCATCAATCTCCTCCCAGTCCTCAATCAATTTCTTCTCAATTTTTCTGTTGGGTAAAATaGGAACGTCATCCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: HSGCHQSPPSPQSISSQFFCWVK*ERHPQG
Trigger: GCCCTGGGGATGACGTTCTCATTTTACCCAACAGAA...AAATTGAGAAGAAATTGATTGAGGACTGGGAGGAGATTGATGGCAGCCAGAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp CTTCTTTCCTACTCCCCCATATCTGCTACTGGAACTTCCATTCCCAAAGATATCACAAAAGACTCCCTCTaGGGCTCTAAGGAGAATCAG +
Preference number: 4 (lower is better)
Translates to: LLSYSPISATGTSIPKDITKDSL*GSKENQ
Trigger: CTGATTCTCCTTAGAGCCTCAGAGGGAGTCTTTTGT...GATATCTTTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGAGTAGGAAAGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp CCATCCTCTTCTTTCCTACTCCCCCATATCTGCTACTGGAACTTCCATTCCCAAAATTCTCTCATTTCCTaGGGCAATATCAGCTCCAAG +
Preference number: 4 (lower is better)
Translates to: PSSSFLLPHICYWNFHSQNSLIS*GNISSK
Trigger: CTTGGAGCTGATATTGCCTCAGGAAATGAGAGAATT...TTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGAGTAGGAAAGAAGAGGATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp GCCAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATACAGTCTCCCCCTACATaGTACGTCAGGCTGAATTTG +
Preference number: 4 (lower is better)
Translates to: AKIPCHMLEPGKLLKMFIQSPPT*YVRLNL
Trigger: CAAATTCAGCCTGACGTATCATGTAGGGGGAGACTG...TATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp TCACTTCCCCAGCTTATTATCCAGAAATACTGGGAACATTCTGCCTTTCAGGCCAAGTTGAAGGACACCTaGAAATTCTTCTCGGCTGGA +
Preference number: 4 (lower is better)
Translates to: SLPQLIIQKYWEHSAFQAKLKDT*KFFSAG
Trigger: TCCAGCCGAGAAGAATTTTCAGGTGTCCTTCAACTT...GGCCTGAAAGGCAGAATGTTCCCAGTATTTCTGGATAATAAGCTGGGGAAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp GCCAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATACGTTGCCATGGAGGTTaGTGTCCTTTACCTGGTTCA +
Preference number: 4 (lower is better)
Translates to: AKIPCHMLEPGKLLKMFIRCHGG*CPLPGS
Trigger: TGAACCAGGTAAAGGACATCAACCTCCATGGCAACG...TATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp ACACTGGGCACATGGGAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGTTCCCAAAGATATCCTaGCTACGGACAATGGTGTCA +
Preference number: 4 (lower is better)
Translates to: TLGTWELFISYCLRSWPRFPKIS*LRTMVS
Trigger: TGACACCATTGTCCGTAGTCAGGATATCTTTGGGAA...CCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTCCCATGTGCCCAGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp TCACTTCCCCAGCTTATTATCCAGAAATACTGGGAACATTCTGCCTTTCAGGCCAATAAAGTGCCAGTTTaGCCCAGAGATCAAGACTGC +
Preference number: 4 (lower is better)
Translates to: SLPQLIIQKYWEHSAFQANKVPV*PRDQDC
Trigger: GCAGTCTTGATCTCTGGGTCAAACTGGCACTTTATT...GGCCTGAAAGGCAGAATGTTCCCAGTATTTCTGGATAATAAGCTGGGGAAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp GACATGAATGAACATAGAGCTGCTCTCTTTGCTTTTGGTGTTTCCCTAATTCTCTGCCCCCAACTTCCCTaGTCACAGTTGCTCCTGAAT +
Preference number: 4 (lower is better)
Translates to: DMNEHRAALFAFGVSLILCPQLP*SQLLLN
Trigger: ATTCAGGAGCAACTGTGATCAGGGAAGTTGGGGGCA...GAGAATTAGGGAAACACCAAAAGCAAAGAGAGCAGCTCTATGTTCATTCATGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp TCACTTCCCCAGCTTATTATCCAGAAATACTGGGAACATTCTGCCTTTCAGGCCTGTATCAATACCAGGTaGGCCTTTGTTCTGATCTCC +
Preference number: 4 (lower is better)
Translates to: SLPQLIIQKYWEHSAFQACINTR*AFVLIS
Trigger: GGAGATCAGAACAAAGGCTCACCTGGTATTGATACA...GGCCTGAAAGGCAGAATGTTCCCAGTATTTCTGGATAATAAGCTGGGGAAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp ATGCCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATTCAGGCTCATCTCCAGACATaGATGAACATAGAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: MPCRHNSCLPVLLIELIQAHLQT*MNIELL
Trigger: GAGCAGCTCTATGTTCATTCATGTCTGGAGATGAGC...CTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp TTCAACACCACCAATTTAATATCTGAATTGCTCCTCTCTCATATAGTGGGTACCGCATTAGGGACAATCTaGCACCTGTACCCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: FNTTNLISELLLSHIVGTALGTI*HLYPGV
Trigger: CACCCCAGGGTACAGGTGGCAGATTGTCCCTAATGC...GGTACCCACTATATGAGAGAGGAGCAATTCAGATATTAAATTGGTGGTGTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR GCA 90 bp CCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATTCAGGGCTCTGACCAACTGAAATaGAAGGAAGCTTGGCTATCT +
Preference number: 4 (lower is better)
Translates to: PCRHNSCLPVLLIELIQGSDQLK*KEAWLS
Trigger: AGATAGCCAAGCTTCCTTGCATTTCAGTTGGTCAGA...GCCCTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp TCTCATATAGTGGGTACCCCAAACTCACTAAAGGCAAAGCTTAAGCAACCATCCTATCCCATGATGCTCTaGTTCCAGGTAGTACATGGC +
Preference number: 4 (lower is better)
Translates to: SHIVGTPNSLKAKLKQPSYPMML*FQVVHG
Trigger: GCCATGTACTACCTGGAAGCAGAGCATCATGGGATA...GGATGGTTGCTTAAGCTTTGCCTTTAGTGAGTTTGGGGTACCCACTATATGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR GCA 90 bp ATGCCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATTCAGTATCCCATGATGCTCTaGTTCCAGGTAGTACATGGC +
Preference number: 4 (lower is better)
Translates to: MPCRHNSCLPVLLIELIQYPMML*FQVVHG
Trigger: GCCATGTACTACCTGGAAGCAGAGCATCATGGGATA...CTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp GACATGAATGAACATAGAGCTGCTCTCTTTGCTTTTGGTGTTTCCCTAATTCTCCAATCCTCATCCCCCTaGTTGGGGCTATCCCATGAT +
Preference number: 4 (lower is better)
Translates to: DMNEHRAALFAFGVSLILQSSSP*LGLSHD
Trigger: ATCATGGGATAGCCCCAAGCAGGGGGATGAGGATTG...GAGAATTAGGGAAACACCAAAAGCAAAGAGAGCAGCTCTATGTTCATTCATGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp ACACTGGGCACATGGGAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGGGAAGAAGTTTCCTCTaGCTGATACATTCAGCACCT +
Preference number: 4 (lower is better)
Translates to: TLGTWELFISYCLRSWPRGRSFL*LIHSAP
Trigger: AGGTGCTGAATGTATCAGGCAGAGGAAACTTCTTCC...CCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTCCCATGTGCCCAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR GCA 90 bp TGGGAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGTCTGATTTTGCATCTCCCAGAGGTCAGTaGAATCGAACTGCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: WELFISYCLRSWPRSDFASPRGQ*NRTASS
Trigger: AGAGCTGGCAGTTCGATTGCACTGACCTCTGGGAGA...TGCAAAATCAGACCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR GCA 90 bp CCTTCTATAAAAGAAGCTCAAAGCATTGTGGGTGGTCAATCCAGAGAATGCTTATCTCCCAGAGGTCAGTaGAATCGAACTGCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: PSIKEAQSIVGGQSRECLSPRGQ*NRTASS
Trigger: AGAGCTGGCAGTTCGATTGCACTGACCTCTGGGAGA...TAAGCATTCTCTGGATTGACCACCCACAATGCTTTGAGCTTCTTTTATAGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp ATGGCACACTGTTCCAATAATGGAACACTGGGCACATGGGAGTTATTTATATCCGGGTTTCACACCAGATaGTCGCCTCCGTTAAGTTCA +
Preference number: 4 (lower is better)
Translates to: MAHCSNNGTLGTWELFISGFHTR*SPPLSS
Trigger: TGAACTTAACGGAGGCGAGCATCTGGTGTGAAACCC...GGATATAAATAACTCCCATGTGCCCAGTGTTCCATTATTGGAACAGTGTGCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR GCA 90 bp CAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATAGCGGGTTTCACACCAGATaGTCGCCTCCGTTAAGTTCA +
Preference number: 4 (lower is better)
Translates to: QNSMPHARAWQVTEDVYSGFHTR*SPPLSS
Trigger: TGAACTTAACGGAGGCGAGCATCTGGTGTGAAACCC...GCTATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp CTTCTTTCCTACTCCCCCATATCTGCTACTGGAACTTCCATTCCCAAAGATATCACTGTAAAGAAAAGTTaGCCTGAGTGTTCTGGCCCC +
Preference number: 4 (lower is better)
Translates to: LLSYSPISATGTSIPKDITVKKS*PECSGP
Trigger: GGGGCCAGAACACTCAGGGCAACTTTTCTTTACAGT...GATATCTTTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGAGTAGGAAAGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR GCA 90 bp CCATCCTCTTCTTTCCTACTCCCCCATATCTGCTACTGGAACTTCCATTCCCAATTGCCCCCTTTAATGTaGAGTAAGTTGAGGATGCTT +
Preference number: 4 (lower is better)
Translates to: PSSSFLLPHICYWNFHSQLPPLM*SKLRML
Trigger: AAGCATCCTCAACTTACTGCACATTAAAGGGGGCAA...TTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGAGTAGGAAAGAAGAGGATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR GCA 90 bp CCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATTCAGGGCGAATACAAACAGTGCTaGAGATTACCTTCTGGAGCA +
Preference number: 4 (lower is better)
Translates to: PCRHNSCLPVLLIELIQGEYKQC*RLPSGA
Trigger: TGCTCCAGAAGGTAATCTGCAGCACTGTTTGTATTC...GCCCTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp CTTCTTTCCTACTCCCCCATATCTGCTACTGGAACTTCCATTCCCAAAGATATCTATATCTCATCTCCGTaGATGTCCCAACTAGCAGCG +
Preference number: 4 (lower is better)
Translates to: LLSYSPISATGTSIPKDIYISSP*MSQLAA
Trigger: CGCTGCTAGTTGGGACATGCACGGAGATGAGATATA...GATATCTTTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGAGTAGGAAAGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR GCA 90 bp GATGTTTATAGCTGCTATTTAGGCCCAAAGAGTCAATTCTGGCCTCAGGGATCACCACACTCAGAACATTaGTTCTGTCCACAGGGAAGT +
Preference number: 4 (lower is better)
Translates to: DVYSCYLGPKSQFWPQGSPHSEH*FCPQGS
Trigger: ACTTCCCTGTGGACAGAAGCAATGTTCTGAGTGTGG...TGATCCCTGAGGCCAGAATTGACTCTTTGGGCCTAAATAGCAGCTATAAACATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp TCACTTCCCCAGCTTATTATCCAGAAATACTGGGAACATTCTGCCTTTCAGGCCTGCAATGACCATGCATaGCACACTCAGAACATTGCT +
Preference number: 4 (lower is better)
Translates to: SLPQLIIQKYWEHSAFQACNDHA*HTQNIA
Trigger: AGCAATGTTCTGAGTGTGGCATGCATGGTCATTGCA...GGCCTGAAAGGCAGAATGTTCCCAGTATTTCTGGATAATAAGCTGGGGAAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp TTGAGGGTCAATAAGGCTCTGGGGGAACCAATTCCTCAAATCACACTGTATCTGTGTACACTTCCAATATaGCGGTGTTTGAGCCGTTCA +
Preference number: 4 (lower is better)
Translates to: LRVNKALGEPIPQITLYLCTLPI*RCLSRS
Trigger: TGAACGGCTCAAACACCGGCATATTGGAAGTGTACA...CAGATACAGTGTGATTTGAGGAATTGGTTCCCCCAGAGCCTTATTGACCCTCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR GCA 90 bp CAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATAGCGACCCTCTAAATCTATaGCATGGCCAGCTGTGCCAA +
Preference number: 4 (lower is better)
Translates to: QNSMPHARAWQVTEDVYSDPLNL*HGQLCQ
Trigger: TTGGCACAGCTGGCCATGGCATAGATTTAGAGGGTC...GCTATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp TCCATTCCCAAAGATATCCTGACTACGGACAATGGTGTCACTGTTGACACCCTCTCACTTTGTCCTGAATaGAGTCAAAAGAAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: SIPKDILTTDNGVTVDTLSLCPE*SQKKSW
Trigger: CCAGCTCTTCTTTTGACTGCATTCAGGACAAAGTGA...GAGGGTGTCAACAGTGACACCATTGTCCGTAGTCAGGATATCTTTGGGAATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR GCA 90 bp TCTCATATAGTGGGTACCCCAAACTCACTAAAGGCAAAGCTTAAGCAACCATCCCTGCATTTGGTAGAATaGAGACATCCAGGTCATCGC +
Preference number: 4 (lower is better)
Translates to: SHIVGTPNSLKAKLKQPSLHLVE*RHPGHR
Trigger: GCGATGACCTGGATGTCTGCATTCTACCAAATGCAG...GGATGGTTGCTTAAGCTTTGCCTTTAGTGAGTTTGGGGTACCCACTATATGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR GCA 90 bp ACACTGGGCACATGGGAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGCATCCTGGTCCTCTCTaGTGTTATTGGGTGCATAAT +
Preference number: 4 (lower is better)
Translates to: TLGTWELFISYCLRSWPRHPGPL*CYWVHN
Trigger: ATTATGCACCCAATAACAGCAGAGAGGACCAGGATG...CCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTCCCATGTGCCCAGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR GCA 90 bp TTGAGGGTCAATAAGGCTCTGGGGGAACCAATTCCTCAAATCACACTGTATCTGCTTCACCCTGCTTCCTaGTGCCTCATTAATCTTTCA +
Preference number: 4 (lower is better)
Translates to: LRVNKALGEPIPQITLYLLHPAS*CLINLS
Trigger: TGAAAGATTAATGAGGCAGCAGGAAGCAGGGTGAAG...CAGATACAGTGTGATTTGAGGAATTGGTTCCCCCAGAGCCTTATTGACCCTCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR GCA 90 bp TCCATTCCCAAAGATATCCTGACTACGGACAATGGTGTCACTGTTGACACCCTCTATTTCCTCCATCAGTaGACAAGAATGGCACACTGT +
Preference number: 4 (lower is better)
Translates to: SIPKDILTTDNGVTVDTLYFLHQ*TRMAHC
Trigger: ACAGTGTGCCATTCTTGTGCACTGATGGAGGAAATA...GAGGGTGTCAACAGTGACACCATTGTCCGTAGTCAGGATATCTTTGGGAATGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR GCA 90 bp GTTATTCCTACGCAGAGGGATAGGATAAAACATGCCTCCCAGAAAGACTGGTCTAATACCAATTGTGGCTaGACTGGAAGCTCATTTCCC +
Preference number: 4 (lower is better)
Translates to: VIPTQRDRIKHASQKDWSNTNCG*TGSSFP
Trigger: GGGAAATGAGCTTCCAGTGCAGCCACAATTGGTATT...AGACCAGTCTTTCTGGGAGGCATGTTTTATCCTATCCCTCTGCGTAGGAATAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp GCCAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATAATGGCAGCCAGCTTGTaGCTCCAGAGTAAACGTCTA +
Preference number: 4 (lower is better)
Translates to: AKIPCHMLEPGKLLKMFIMAASL*LQSKRL
Trigger: TAGACGTTTACTCTGGAGGCACAAGCTGGCTGCCAT...TATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp CCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATTCAGGGCAGGGAAGGCATGTTCTaGCTAAGTCATTCGAGTTTT +
Preference number: 4 (lower is better)
Translates to: PCRHNSCLPVLLIELIQGREGMF*LSHSSF
Trigger: AAAACTCGAATGACTTAGGCAGAACATGCCTTCCCT...GCCCTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp CAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATAGCGCTATCTCGTGGTCCTaGATTTGGACTGCTTACCAG +
Preference number: 4 (lower is better)
Translates to: QNSMPHARAWQVTEDVYSAISWS*IWTAYQ
Trigger: CTGGTAAGCAGTCCAAATCCAGGACCACGAGATAGC...GCTATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp ATGCCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATTCAGAAACTTGGTGAACGATaGGTGTCTGCGCCTTGGAAA +
Preference number: 4 (lower is better)
Translates to: MPCRHNSCLPVLLIELIQKLGER*VSAPWK
Trigger: TTTCCAAGGCGCAGACACCCATCGTTCACCAAGTTT...CTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp CCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATTCAGGGCTGGAACACCACTTGGTaGATAAACTTGGTGAACGAT +
Preference number: 4 (lower is better)
Translates to: PCRHNSCLPVLLIELIQGWNTTW*INLVND
Trigger: ATCGTTCACCAAGTTTATCCACCAAGTGGTGTTCCA...GCCCTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp ACACTGGGCACATGGGAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGTCCTGGAACACCACTTaGTGGATAAACTTGGTGAAC +
Preference number: 4 (lower is better)
Translates to: TLGTWELFISYCLRSWPRSWNTT*WINLVN
Trigger: GTTCACCAAGTTTATCCACCAAGTGGTGTTCCAGGA...CCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTCCCATGTGCCCAGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp CCCGTACAAATGTGTGAATTTGGTGAAATTGCCTTTAACAACCTTACCAAATGTCCTCATCCCCCTGCTTaGGGCTATCCCATGATGCTC +
Preference number: 4 (lower is better)
Translates to: PVQMCEFGEIAFNNLTKCPHPPA*GYPMML
Trigger: GAGCATCATGGGATAGCCCCAAGCAGGGGGATGAGG...ACATTTGGTAAGGTTGTTAAAGGCAATTTCACCAAATTCACACATTTGTACGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp GAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGTCTGATTTTGCAATTACTTCTGGAAGCCTCTaGGCTCGGACTCGGATCTGG +
Preference number: 4 (lower is better)
Translates to: ELFISYCLRSWPRSDFAITSGSL*ARTRIW
Trigger: CCAGATCCGAGTCCGAGCCCAGAGGCTTCCAGAAGT...AATTGCAAAATCAGACCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp CCTTCTATAAAAGAAGCTCAAAGCATTGTGGGTGGTCAATCCAGAGAATGCTTAGGTCCCCATCAGAGTTaGAAACTTCTGGGCCTCGTT +
Preference number: 4 (lower is better)
Translates to: PSIKEAQSIVGGQSRECLGPHQS*KLLGLV
Trigger: AACGAGGCCCAGAAGTTTCCAACTCTGATGGGGACC...TAAGCATTCTCTGGATTGACCACCCACAATGCTTTGAGCTTCTTTTATAGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp AGCCTGAAGATCTGCAATACTCACCAGATGCCTAAAGAAGAGGTTAAAACATTTGACCCTTGGAGGTACTaGAAAGAGCAGGAACCTGGG +
Preference number: 4 (lower is better)
Translates to: SLKICNTHQMPKEEVKTFDPWRY*KEQEPG
Trigger: CCCAGGTTCCTGCTCTTTCCAGTACCTCCAAGGGTC...AAATGTTTTAACCTCTTCTTTAGGCATCTGGTGAGTATTGCAGATCTTCAGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp CATTCTGGCTGCCATCAATCTCCTCCCAGTCCTCAATCAATTTCTTCTCAATTTGAGTACCACACAGAATaGACACAGGGAGTTGACCCT +
Preference number: 4 (lower is better)
Translates to: HSGCHQSPPSPQSISSQFEYHTE*TQGVDP
Trigger: AGGGTCAACTCCCTGTGTCCATTCTGTGTGGTACTC...AAATTGAGAAGAAATTGATTGAGGACTGGGAGGAGATTGATGGCAGCCAGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp ATGCCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATTCAGGTAACCTGCAAGAACTaGGAGTCACCAGAGAAACCA +
Preference number: 4 (lower is better)
Translates to: MPCRHNSCLPVLLIELIQVTCKN*ESPEKP
Trigger: TGGTTTCTCTGGTGACTCCCAGTTCTTGCAGGTTAC...CTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp CAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATAGCTACCCAAACCAAAGCTaGGTCCCTGCTGAAGCCTAT +
Preference number: 4 (lower is better)
Translates to: QNSMPHARAWQVTEDVYSYPNQS*VPAEAY
Trigger: ATAGGCTTCAGCAGGGACCCAGCTTTGGTTTGGGTA...GCTATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp GACATGAATGAACATAGAGCTGCTCTCTTTGCTTTTGGTGTTTCCCTAATTCTCCCTGCGATGGGAAGATaGCCATTATCCGAGGCATCA +
Preference number: 4 (lower is better)
Translates to: DMNEHRAALFAFGVSLILPAMGR*PLSEAS
Trigger: TGATGCCTCGGATAATGGCCATCTTCCCATCGCAGG...GAGAATTAGGGAAACACCAAAAGCAAAGAGAGCAGCTCTATGTTCATTCATGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp CATTCTGGCTGCCATCAATCTCCTCCCAGTCCTCAATCAATTTCTTCTCAATTTTGGTCAGAGACCCACTaGTGTTTGTGGACAAGGCAT +
Preference number: 4 (lower is better)
Translates to: HSGCHQSPPSPQSISSQFWSETH*CLWTRH
Trigger: ATGCCTTGTCCACAAACACCAGTGGGTCTCTGACCA...AAATTGAGAAGAAATTGATTGAGGACTGGGAGGAGATTGATGGCAGCCAGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp CAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATAGCTGGTCAGAGACCCACTaGTGTTTGTGGACAAGGCAT +
Preference number: 4 (lower is better)
Translates to: QNSMPHARAWQVTEDVYSWSETH*CLWTRH
Trigger: ATGCCTTGTCCACAAACACCAGTGGGTCTCTGACCA...GCTATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp ATGCCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATTCAGCAATATAGACTGACGTaGTGTTCTGTCCTCTCAGGC +
Preference number: 4 (lower is better)
Translates to: MPCRHNSCLPVLLIELIQQYRLT*CSVLSG
Trigger: GCCTGAGAGGACAGAACACCACGTCAGTCTATATTG...CTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp TCTCATATAGTGGGTACCCCAAACTCACTAAAGGCAAAGCTTAAGCAACCATCCGGCACAAAGAGGCATTaGGAACTTTCCTCGCAAATG +
Preference number: 4 (lower is better)
Translates to: SHIVGTPNSLKAKLKQPSGTKRH*ELSSQM
Trigger: CATTTGCGAGGAAAGTTCCCAATGCCTCTTTGTGCC...GGATGGTTGCTTAAGCTTTGCCTTTAGTGAGTTTGGGGTACCCACTATATGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp ATGGCACACTGTTCCAATAATGGAACACTGGGCACATGGGAGTTATTTATATCCCTCTGCCCAATGATCTaGCACAAAGAGGCATTGGGA +
Preference number: 4 (lower is better)
Translates to: MAHCSNNGTLGTWELFISLCPMI*HKEALG
Trigger: TCCCAATGCCTCTTTGTGCCAGATCATTGGGCAGAG...GGATATAAATAACTCCCATGTGCCCAGTGTTCCATTATTGGAACAGTGTGCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp GCCAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATACTCTGCCCAATGATCTaGCACAAAGAGGCATTGGGA +
Preference number: 4 (lower is better)
Translates to: AKIPCHMLEPGKLLKMFILCPMI*HKEALG
Trigger: TCCCAATGCCTCTTTGTGCCAGATCATTGGGCAGAG...TATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp CAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATAGCGTTGTCGCCATCTTGTaGCAGCCTTTCAGGAAACCA +
Preference number: 4 (lower is better)
Translates to: QNSMPHARAWQVTEDVYSVVAIL*QPFRKP
Trigger: TGGTTTCCTGAAAGGCTGCCACAAGATGGCGACAAC...GCTATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp ATGGCACACTGTTCCAATAATGGAACACTGGGCACATGGGAGTTATTTATATCCTCCAGCAGAAGCAATTaGCCATTCTCCACTGTGACG +
Preference number: 4 (lower is better)
Translates to: MAHCSNNGTLGTWELFISSSRSN*PFSTVT
Trigger: CGTCACAGTGGAGAATGGCCAATTGCTTCTGCTGGA...GGATATAAATAACTCCCATGTGCCCAGTGTTCCATTATTGGAACAGTGTGCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp GACATGAATGAACATAGAGCTGCTCTCTTTGCTTTTGGTGTTTCCCTAATTCTCCTGCAGATTACCTTCTaGAGCATTGGCCTCCTGGCA +
Preference number: 4 (lower is better)
Translates to: DMNEHRAALFAFGVSLILLQITF*SIGLLA
Trigger: TGCCAGGAGGCCAATGCTCCAGAAGGTAATCTGCAG...GAGAATTAGGGAAACACCAAAAGCAAAGAGAGCAGCTCTATGTTCATTCATGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp CCCGTACAAATGTGTGAATTTGGTGAAATTGCCTTTAACAACCTTACCAAATGTCCCTTCAACTGGACCTaGCTGGGCTCTTCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: PVQMCEFGEIAFNNLTKCPFNWT*LGSSGK
Trigger: CTTCCCAGAAGAGCCCAGCCAGGTCCAGTTGAAGGG...ACATTTGGTAAGGTTGTTAAAGGCAATTTCACCAAATTCACACATTTGTACGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp TTGAGGGTCAATAAGGCTCTGGGGGAACCAATTCCTCAAATCACACTGTATCTGAATCCACCTTGTCCTTaGGAACAGTCTGAACAGGTT +
Preference number: 4 (lower is better)
Translates to: LRVNKALGEPIPQITLYLNPPCP*EQSEQV
Trigger: AACCTGTTCAGACTGTTCCCAAGGACAAGGTGGATT...CAGATACAGTGTGATTTGAGGAATTGGTTCCCCCAGAGCCTTATTGACCCTCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp ATGCCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATTCAGGTGAGTTGCCTCAGCTaGCTATTGAAGAACCAGTCA +
Preference number: 4 (lower is better)
Translates to: MPCRHNSCLPVLLIELIQVSCLS*LLKNQS
Trigger: TGACTGGTTCTTCAATAGCCAGCTGAGGCAACTCAC...CTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp TTCAACACCACCAATTTAATATCTGAATTGCTCCTCTCTCATATAGTGGGTACCCCCCAGGGCCTGGAATaGTATTGTTGTATCCTCCCC +
Preference number: 4 (lower is better)
Translates to: FNTTNLISELLLSHIVGTPQGLE*YCCILP
Trigger: GGGGAGGATACAACAATACCATTCCAGGCCCTGGGG...GGTACCCACTATATGAGAGAGGAGCAATTCAGATATTAAATTGGTGGTGTTGAA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp GCCAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATAGTCATCCCCAGGGCCTaGAATGGTATTGTTGTATCC +
Preference number: 4 (lower is better)
Translates to: AKIPCHMLEPGKLLKMFIVIPRA*NGIVVS
Trigger: GGATACAACAATACCATTCCAGGCCCTGGGGATGAC...TATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp CCTTCTATAAAAGAAGCTCAAAGCATTGTGGGTGGTCAATCCAGAGAATGCTTACCTCACTTTGTGCCATaGCTCCTGAGGCCACTGATT +
Preference number: 4 (lower is better)
Translates to: PSIKEAQSIVGGQSRECLPHFVP*LLRPLI
Trigger: AATCAGTGGCCTCAGGAGCCATGGCACAAAGTGAGG...TAAGCATTCTCTGGATTGACCACCCACAATGCTTTGAGCTTCTTTTATAGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp CCTTCTATAAAAGAAGCTCAAAGCATTGTGGGTGGTCAATCCAGAGAATGCTTAAGGAAATACAGAAACTaGTGGAGGCAGACCCAGGGC +
Preference number: 4 (lower is better)
Translates to: PSIKEAQSIVGGQSRECLRKYRN*WRQTQG
Trigger: GCCCTGGGTCTGCCTCCACCAGTTTCTGTATTTCCT...TAAGCATTCTCTGGATTGACCACCCACAATGCTTTGAGCTTCTTTTATAGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp TCCCCCATATCTGCTACTGGAACTTCCATTCCCAAAGATATCCTGACTACGGACGGAACACTGGGCACATaGGAGTTATTTATATCCTAC +
Preference number: 4 (lower is better)
Translates to: SPISATGTSIPKDILTTDGTLGT*ELFISY
Trigger: GTAGGATATAAATAACTCCCATGTGCCCAGTGTTCC...GTCCGTAGTCAGGATATCTTTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp CAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATAGCGCACAGATGTGCCCATaGGATGTGATGCCAGTAGTA +
Preference number: 4 (lower is better)
Translates to: QNSMPHARAWQVTEDVYSAQMCP*DVMPVV
Trigger: TACTACTGGCATCACATCCCATGGGCACATCTGTGC...GCTATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp GACATGAATGAACATAGAGCTGCTCTCTTTGCTTTTGGTGTTTCCCTAATTCTCGAGCATAAGGCCTTCTaGATCCAGAGCCAAGGACAC +
Preference number: 4 (lower is better)
Translates to: DMNEHRAALFAFGVSLILEHKAF*IQSQGH
Trigger: GTGTCCTTGGCTCTGGATCCAGAAGGCCTTATGCTC...GAGAATTAGGGAAACACCAAAAGCAAAGAGAGCAGCTCTATGTTCATTCATGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp TCCTGCGATCTTTTCTTTACATGCTTGGAGCATAAGGCCTTCTGGATCCAGAGCAGAGCAATCTCTTTTTaGAAGCTCTCCACATTCCTG +
Preference number: 4 (lower is better)
Translates to: SCDLFFTCLEHKAFWIQSRAISF*KLSTFL
Trigger: CAGGAATGTGGAGAGCTTCCAAAAAGAGATTGCTCT...GCTCTGGATCCAGAAGGCCTTATGCTCCAAGCATGTAAAGAAAAGATCGCAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp CCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATTCAGGGCGACTTGAAGTTCTGTTaGTCAGGTACTTTCCCTGAA +
Preference number: 4 (lower is better)
Translates to: PCRHNSCLPVLLIELIQGDLKFC*SGTFPE
Trigger: TTCAGGGAAAGTACCTGACCAACAGAACTTCAAGTC...GCCCTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp GACATGAATGAACATAGAGCTGCTCTCTTTGCTTTTGGTGTTTCCCTAATTCTCGTTCTTGGTCCTTGGTaGCCTCACTGGGCAGTAACA +
Preference number: 4 (lower is better)
Translates to: DMNEHRAALFAFGVSLILVLGPW*PHWAVT
Trigger: TGTTACTGCCCAGTGAGGCCACCAAGGACCAAGAAC...GAGAATTAGGGAAACACCAAAAGCAAAGAGAGCAGCTCTATGTTCATTCATGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp TCTCATATAGTGGGTACCCCAAACTCACTAAAGGCAAAGCTTAAGCAACCATCCGTTTCTGTCTCCTTGTaGCTCAAGGGAGAAATGATC +
Preference number: 4 (lower is better)
Translates to: SHIVGTPNSLKAKLKQPSVSVSL*LKGEMI
Trigger: GATCATTTCTCCCTTGAGTCACAAGGAGACAGAAAC...GGATGGTTGCTTAAGCTTTGCCTTTAGTGAGTTTGGGGTACCCACTATATGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp GATGTTTATAGCTGCTATTTAGGCCCAAAGAGTCAATTCTGGCCTCAGGGATCAGTTTCTGTCTCCTTGTaGCTCAAGGGAGAAATGATC +
Preference number: 4 (lower is better)
Translates to: DVYSCYLGPKSQFWPQGSVSVSL*LKGEMI
Trigger: GATCATTTCTCCCTTGAGTCACAAGGAGACAGAAAC...TGATCCCTGAGGCCAGAATTGACTCTTTGGGCCTAAATAGCAGCTATAAACATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp GACATGAATGAACATAGAGCTGCTCTCTTTGCTTTTGGTGTTTCCCTAATTCTCGTTCCTCTGACCAACTaGAATGCAAGGAAGCTTGGC +
Preference number: 4 (lower is better)
Translates to: DMNEHRAALFAFGVSLILVPLTN*NARKLG
Trigger: GCCAAGCTTCCTTGCATTTCAGTTGGTCAGAGGAAC...GAGAATTAGGGAAACACCAAAAGCAAAGAGAGCAGCTCTATGTTCATTCATGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp GACATGAATGAACATAGAGCTGCTCTCTTTGCTTTTGGTGTTTCCCTAATTCTCTTCAGCCAGGTGTTGTaGATCTGGACACCAATCCTC +
Preference number: 4 (lower is better)
Translates to: DMNEHRAALFAFGVSLILFSQVL*IWTPIL
Trigger: GAGGATTGGTGTCCAGATTCACAACACCTGGCTGAA...GAGAATTAGGGAAACACCAAAAGCAAAGAGAGCAGCTCTATGTTCATTCATGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp CAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATAGCTTTGCAGGGATTGGCTaGCTAGAGACATTGTCCCAA +
Preference number: 4 (lower is better)
Translates to: QNSMPHARAWQVTEDVYSFAGIG*LETLSQ
Trigger: TTGGGACAATGTCTCTAGTCAGCCAATCCCTGCAAA...GCTATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp TCCTGCGATCTTTTCTTTACATGCTTGGAGCATAAGGCCTTCTGGATCCAGAGCTTCTTTACCATGTTTTaGAAGCCGATTGTGAAGGAC +
Preference number: 4 (lower is better)
Translates to: SCDLFFTCLEHKAFWIQSFFTMF*KPIVKD
Trigger: GTCCTTCACAATCGGCTTTCAAAACATGGTAAAGAA...GCTCTGGATCCAGAAGGCCTTATGCTCCAAGCATGTAAAGAAAAGATCGCAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp GTTATTCCTACGCAGAGGGATAGGATAAAACATGCCTCCCAGAAAGACTGGTCTGTTCCAGAATCAGCTTaGGAAACTGTTACGTTTGTG +
Preference number: 4 (lower is better)
Translates to: VIPTQRDRIKHASQKDWSVPESA*ETVTFV
Trigger: CACAAACGTAACAGTTTCTCAAGCTGATTCTGGAAC...AGACCAGTCTTTCTGGGAGGCATGTTTTATCCTATCCCTCTGCGTAGGAATAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp GCCAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATAGGTAGCAAATCTGTCTaGCAGACTACATTGGTCTGG +
Preference number: 4 (lower is better)
Translates to: AKIPCHMLEPGKLLKMFIGSKSV*QTTLVW
Trigger: CCAGACCAATGTAGTCTGTCAGACAGATTTGCTACC...TATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp TTGAGGGTCAATAAGGCTCTGGGGGAACCAATTCCTCAAATCACACTGTATCTGGCACTGAATTCTGCTTaGATTGCTTGTAGCGACATT +
Preference number: 4 (lower is better)
Translates to: LRVNKALGEPIPQITLYLALNSA*IACSDI
Trigger: AATGTCGCTACAAGCAATTCAAGCAGAATTCAGTGC...CAGATACAGTGTGATTTGAGGAATTGGTTCCCCCAGAGCCTTATTGACCCTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp CAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATAGCTCAGGCTGCTATTTGTaGTTTCTCCTTGCATGGCAG +
Preference number: 4 (lower is better)
Translates to: QNSMPHARAWQVTEDVYSSGCYL*FLLAWQ
Trigger: CTGCCATGCAAGGAGAAATCACAAATAGCAGCCTGA...GCTATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp TGGGAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGTCTGATTTTGCAGAGGTCAACCCGAACTaGCCTCCTTCTAGAGTTAAG +
Preference number: 4 (lower is better)
Translates to: WELFISYCLRSWPRSDFAEVNPN*PPSRVK
Trigger: CTTAACTCTAGAAGGAGGTCAGTTCGGGTTGACCTC...TGCAAAATCAGACCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp GACATGAATGAACATAGAGCTGCTCTCTTTGCTTTTGGTGTTTCCCTAATTCTCGAGGTCAACCCGAACTaGCCTCCTTCTAGAGTTAAG +
Preference number: 4 (lower is better)
Translates to: DMNEHRAALFAFGVSLILEVNPN*PPSRVK
Trigger: CTTAACTCTAGAAGGAGGTCAGTTCGGGTTGACCTC...GAGAATTAGGGAAACACCAAAAGCAAAGAGAGCAGCTCTATGTTCATTCATGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp GAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGTCTGATTTTGCAATTAGAGTGCAATTCCCCTaGCACTCGCTGGTTAGCCCA +
Preference number: 4 (lower is better)
Translates to: ELFISYCLRSWPRSDFAIRVQFP*HSLVSP
Trigger: TGGGCTAACCAGCGAGTGTCAGGGGAATTGCACTCT...AATTGCAAAATCAGACCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp ACACTGGGCACATGGGAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGTGTAATAATAACTCTTaGGGTGAACACCAGGGCAGA +
Preference number: 4 (lower is better)
Translates to: TLGTWELFISYCLRSWPRCNNNS*GEHQGR
Trigger: TCTGCCCTGGTGTTCACCTCAAGAGTTATTATTACA...CCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTCCCATGTGCCCAGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp AGCCTGAAGATCTGCAATACTCACCAGATGCCTAAAGAAGAGGTTAAAACATTTAAAGAAAAGTTGCCCTaGGTGTTCTGGCCCCAGCGT +
Preference number: 4 (lower is better)
Translates to: SLKICNTHQMPKEEVKTFKEKLP*VFWPQR
Trigger: ACGCTGGGGCCAGAACACTCAGGGCAACTTTTCTTT...AAATGTTTTAACCTCTTCTTTAGGCATCTGGTGAGTATTGCAGATCTTCAGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp CCTTCTATAAAAGAAGCTCAAAGCATTGTGGGTGGTCAATCCAGAGAATGCTTATCCCACCAGAGTGAGTaGGCTCAGATGCTTATGGAA +
Preference number: 4 (lower is better)
Translates to: PSIKEAQSIVGGQSRECLSHQSE*AQMLME
Trigger: TTCCATAAGCATCTGAGCTCACTCACTCTGGTGGGA...TAAGCATTCTCTGGATTGACCACCCACAATGCTTTGAGCTTCTTTTATAGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp TCCTGCGATCTTTTCTTTACATGCTTGGAGCATAAGGCCTTCTGGATCCAGAGCCACCAGAAACCTGGATaGTCACGTTGTTTCTTATTA +
Preference number: 4 (lower is better)
Translates to: SCDLFFTCLEHKAFWIQSHQKPG*SRCFLL
Trigger: TAATAAGAAACAACGTGATCATCCAGGTTTCTGGTG...GCTCTGGATCCAGAAGGCCTTATGCTCCAAGCATGTAAAGAAAAGATCGCAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp ATGGCACACTGTTCCAATAATGGAACACTGGGCACATGGGAGTTATTTATATCCAAGAAGCGGAGCTTGTaGTGTTTGGTTGGTCATGAG +
Preference number: 4 (lower is better)
Translates to: MAHCSNNGTLGTWELFISKKRSL*CLVGHE
Trigger: CTCATGACCAACCAAACATCACAAGCTCCGCTTCTT...GGATATAAATAACTCCCATGTGCCCAGTGTTCCATTATTGGAACAGTGTGCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp CCATCCTCTTCTTTCCTACTCCCCCATATCTGCTACTGGAACTTCCATTCCCAAAGTTTTAATCCCAGATaGCATACACAGACTTCCCTT +
Preference number: 4 (lower is better)
Translates to: PSSSFLLPHICYWNFHSQSFNPR*HTQTSL
Trigger: AAGGGAAGTCTGTGTATGTCATCTGGGATTAAAACT...TTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGAGTAGGAAAGAAGAGGATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp TCTCATATAGTGGGTACCCCAAACTCACTAAAGGCAAAGCTTAAGCAACCATCCGACCAAACAAGAAGCTaGAAGGGTTTCCATAGAAGC +
Preference number: 4 (lower is better)
Translates to: SHIVGTPNSLKAKLKQPSDQTRS*KGFHRS
Trigger: GCTTCTATGGAAACCCTTTCAGCTTCTTGTTTGGTC...GGATGGTTGCTTAAGCTTTGCCTTTAGTGAGTTTGGGGTACCCACTATATGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp TCACTTCCCCAGCTTATTATCCAGAAATACTGGGAACATTCTGCCTTTCAGGCCACTGCAGAGATCTGTTaGTCCAAAGGTTCTCAGATT +
Preference number: 4 (lower is better)
Translates to: SLPQLIIQKYWEHSAFQATAEIC*SKGSQI
Trigger: AATCTGAGAACCTTTGGATCAACAGATCTCTGCAGT...GGCCTGAAAGGCAGAATGTTCCCAGTATTTCTGGATAATAAGCTGGGGAAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp CCTTCTATAAAAGAAGCTCAAAGCATTGTGGGTGGTCAATCCAGAGAATGCTTACTGAAACCAGATAGGTaGGTTGCCTCAGCTGGCTAT +
Preference number: 4 (lower is better)
Translates to: PSIKEAQSIVGGQSRECLLKPDR*VASAGY
Trigger: ATAGCCAGCTGAGGCAACTCACCTATCTGGTTTCAG...TAAGCATTCTCTGGATTGACCACCCACAATGCTTTGAGCTTCTTTTATAGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp CAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATAGCAACTTGGCCTTCACCTaGAACCAGATAGGTGAGTTG +
Preference number: 4 (lower is better)
Translates to: QNSMPHARAWQVTEDVYSNLAFT*NQIGEL
Trigger: CAACTCACCTATCTGGTTTCAGGTGAAGGCCAAGTT...GCTATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp TTCAACACCACCAATTTAATATCTGAATTGCTCCTCTCTCATATAGTGGGTACCCCTTCACCCGGAGAATaGCTTGAACTTGGCCTTCAC +
Preference number: 4 (lower is better)
Translates to: FNTTNLISELLLSHIVGTPSPGE*LELGLH
Trigger: GTGAAGGCCAAGTTCAAGTCATTCTCCGGGTGAAGG...GGTACCCACTATATGAGAGAGGAGCAATTCAGATATTAAATTGGTGGTGTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp CATTCTGGCTGCCATCAATCTCCTCCCAGTCCTCAATCAATTTCTTCTCAATTTCAATATGCCGGTGTTTaGGCCGTTCATAGATCCTCA +
Preference number: 4 (lower is better)
Translates to: HSGCHQSPPSPQSISSQFQYAGV*AVHRSS
Trigger: TGAGGATCTATGAACGGCTCAAACACCGGCATATTG...AAATTGAGAAGAAATTGATTGAGGACTGGGAGGAGATTGATGGCAGCCAGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp GACATGAATGAACATAGAGCTGCTCTCTTTGCTTTTGGTGTTTCCCTAATTCTCGTCGGCCATCCTCCGTaGCATGTACACTTCCAATAT +
Preference number: 4 (lower is better)
Translates to: DMNEHRAALFAFGVSLILVGHPP*HVHFQY
Trigger: ATATTGGAAGTGTACATGTCACGGAGGATGGCCGAC...GAGAATTAGGGAAACACCAAAAGCAAAGAGAGCAGCTCTATGTTCATTCATGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp CCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATTCAGGGCCTGCTGACACATTACTaGATTCAACAGATGAGTACA +
Preference number: 4 (lower is better)
Translates to: PCRHNSCLPVLLIELIQGLLTHY*IQQMST
Trigger: TGTACTCATCTGTTGAATTCAGTAATGTGTCAGCAG...GCCCTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp ATAGTGGGTACCCCAAACTCACTAAAGGCAAAGCTTAAGCAACCATCCTCTTCTGATCCAGGATCCTGCTaGCACATTACTGAATTCAAC +
Preference number: 4 (lower is better)
Translates to: IVGTPNSLKAKLKQPSSSDPGSC*HITEFN
Trigger: GTTGAATTCAGTAATGTGTCAGCAGGATCCTGGATC...AGAAGAGGATGGTTGCTTAAGCTTTGCCTTTAGTGAGTTTGGGGTACCCACTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp ATGCCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATTCAGGATCCAGGATCCTGCTaGCACATTACTGAATTCAAC +
Preference number: 4 (lower is better)
Translates to: MPCRHNSCLPVLLIELIQDPGSC*HITEFN
Trigger: GTTGAATTCAGTAATGTGTCAGCAGGATCCTGGATC...CTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp CCTTCTATAAAAGAAGCTCAAAGCATTGTGGGTGGTCAATCCAGAGAATGCTTACCACTGATTTGGTTCTaGGGTGAATACAGGCCACAG +
Preference number: 4 (lower is better)
Translates to: PSIKEAQSIVGGQSRECLPLIWF*GEYRPQ
Trigger: CTGTGGCCTGTATTCACCTCAGAACCAAATCAGTGG...TAAGCATTCTCTGGATTGACCACCCACAATGCTTTGAGCTTCTTTTATAGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp CCTTCTATAAAAGAAGCTCAAAGCATTGTGGGTGGTCAATCCAGAGAATGCTTAAGTTTCCGGGTGTACTaGATGAAGGCAGAATGCCTC +
Preference number: 4 (lower is better)
Translates to: PSIKEAQSIVGGQSRECLSFRVY*MKAECL
Trigger: GAGGCATTCTGCCTTCATTCAGTACACCCGGAAACT...TAAGCATTCTCTGGATTGACCACCCACAATGCTTTGAGCTTCTTTTATAGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp CAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATAGCGGTGAGCCTTTGTTCTaGTCTCCATTTAAACCCCCT +
Preference number: 4 (lower is better)
Translates to: QNSMPHARAWQVTEDVYSGEPLF*SPFKPP
Trigger: AGGGGGTTTAAATGGAGATCAGAACAAAGGCTCACC...GCTATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp CAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATAGCCTTTTAGGGACAGCCTaGAGATCTGCAATACTCACC +
Preference number: 4 (lower is better)
Translates to: QNSMPHARAWQVTEDVYSLLGTA*RSAILT
Trigger: GGTGAGTATTGCAGATCTTCAGGCTGTCCCTAAAAG...GCTATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp GACATGAATGAACATAGAGCTGCTCTCTTTGCTTTTGGTGTTTCCCTAATTCTCCCAAATCCAACACAGTaGCCACAGAGAAGGCTACCT +
Preference number: 4 (lower is better)
Translates to: DMNEHRAALFAFGVSLILPNPTQ*PQRRLP
Trigger: AGGTAGCCTTCTCTGTGGTCACTGTGTTGGATTTGG...GAGAATTAGGGAAACACCAAAAGCAAAGAGAGCAGCTCTATGTTCATTCATGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp GTTATTCCTACGCAGAGGGATAGGATAAAACATGCCTCCCAGAAAGACTGGTCTGATTGCAAAGGCAAATaGCTTCAAGACCGAGAATCT +
Preference number: 4 (lower is better)
Translates to: VIPTQRDRIKHASQKDWSDCKGK*LQDRES
Trigger: AGATTCTCGGTCTTGAAGTCATTTGCCTTTGCAATC...AGACCAGTCTTTCTGGGAGGCATGTTTTATCCTATCCCTCTGCGTAGGAATAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp TTCAACACCACCAATTTAATATCTGAATTGCTCCTCTCTCATATAGTGGGTACCCTGTCCCCCGAAGTATaGTTCCAGGAAGTACAGACC +
Preference number: 4 (lower is better)
Translates to: FNTTNLISELLLSHIVGTLSPEV*FQEVQT
Trigger: GGTCTGTACTTCCTGGAAGCATACTTCGGGGGACAG...GGTACCCACTATATGAGAGAGGAGCAATTCAGATATTAAATTGGTGGTGTTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR GCA 90 bp AGCCTGAAGATCTGCAATACTCACCAGATGCCTAAAGAAGAGGTTAAAACATTTCTGTCCCCCGAAGTATaGTTCCAGGAAGTACAGACC +
Preference number: 4 (lower is better)
Translates to: SLKICNTHQMPKEEVKTFLSPEV*FQEVQT
Trigger: GGTCTGTACTTCCTGGAAGCATACTTCGGGGGACAG...AAATGTTTTAACCTCTTCTTTAGGCATCTGGTGAGTATTGCAGATCTTCAGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp GATGTTTATAGCTGCTATTTAGGCCCAAAGAGTCAATTCTGGCCTCAGGGATCATTGTTCACTGTAACCTaGAAGAACTGGGAGTCACCA +
Preference number: 4 (lower is better)
Translates to: DVYSCYLGPKSQFWPQGSLFTVT*KNWESP
Trigger: TGGTGACTCCCAGTTCTTGCAGGTTACAGTGAACAA...TGATCCCTGAGGCCAGAATTGACTCTTTGGGCCTAAATAGCAGCTATAAACATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp ATAGTGGGTACCCCAAACTCACTAAAGGCAAAGCTTAAGCAACCATCCTCTTCTCACCGCCTGCTATATTaGTTATGTTTCTGCTCAGAG +
Preference number: 4 (lower is better)
Translates to: IVGTPNSLKAKLKQPSSSHRLLY*LCFCSE
Trigger: CTCTGAGCAGAAACATAAGCAATATAGCAGGCGGTG...AGAAGAGGATGGTTGCTTAAGCTTTGCCTTTAGTGAGTTTGGGGTACCCACTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR GCA 90 bp ATGGCACACTGTTCCAATAATGGAACACTGGGCACATGGGAGTTATTTATATCCGACTACTGGTGTTGCTaGCGCTTCATACATGAAGGT +
Preference number: 4 (lower is better)
Translates to: MAHCSNNGTLGTWELFISDYWCC*RFIHEG
Trigger: ACCTTCATGTATGAAGCGGCAGCAACACCAGTAGTC...GGATATAAATAACTCCCATGTGCCCAGTGTTCCATTATTGGAACAGTGTGCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR GCA 90 bp ATGCCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATTCAGAGTGACTACTGGTGTTaGTGCCGCTTCATACATGAA +
Preference number: 4 (lower is better)
Translates to: MPCRHNSCLPVLLIELIQSDYWC*CRFIHE
Trigger: TTCATGTATGAAGCGGCAGCAACACCAGTAGTCACT...CTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp TCACTTCCCCAGCTTATTATCCAGAAATACTGGGAACATTCTGCCTTTCAGGCCATCCATGACAGGACTTaGCTCTTCCCTTATGAAAAG +
Preference number: 4 (lower is better)
Translates to: SLPQLIIQKYWEHSAFQAIHDRT*LFPYEK
Trigger: CTTTTCATAAGGGAAGAGGCAAGTCCTGTCATGGAT...GGCCTGAAAGGCAGAATGTTCCCAGTATTTCTGGATAATAAGCTGGGGAAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp ATAGTGGGTACCCCAAACTCACTAAAGGCAAAGCTTAAGCAACCATCCTCTTCTGCCTTTAAAATATGGTaGTCTCCAGCCACCCAATTC +
Preference number: 4 (lower is better)
Translates to: IVGTPNSLKAKLKQPSSSAFKIW*SPATQF
Trigger: GAATTGGGTGGCTGGAGAGCACCATATTTTAAAGGC...AGAAGAGGATGGTTGCTTAAGCTTTGCCTTTAGTGAGTTTGGGGTACCCACTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR GCA 90 bp GATGTTTATAGCTGCTATTTAGGCCCAAAGAGTCAATTCTGGCCTCAGGGATCAGCCTTTAAAATATGGTaGTCTCCAGCCACCCAATTC +
Preference number: 4 (lower is better)
Translates to: DVYSCYLGPKSQFWPQGSAFKIW*SPATQF
Trigger: GAATTGGGTGGCTGGAGAGCACCATATTTTAAAGGC...TGATCCCTGAGGCCAGAATTGACTCTTTGGGCCTAAATAGCAGCTATAAACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp TCCATTCCCAAAGATATCCTGACTACGGACAATGGTGTCACTGTTGACACCCTCATGGAATACAAACAGTaGTGCAGATTACCTTCTGGA +
Preference number: 4 (lower is better)
Translates to: SIPKDILTTDNGVTVDTLMEYKQ*CRLPSG
Trigger: TCCAGAAGGTAATCTGCAGCACTGTTTGTATTCCAT...GAGGGTGTCAACAGTGACACCATTGTCCGTAGTCAGGATATCTTTGGGAATGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR GCA 90 bp CAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATAGCAATCTGGGCACCACCTaGACTTTCCCAAACTGTGAA +
Preference number: 4 (lower is better)
Translates to: QNSMPHARAWQVTEDVYSNLGTT*TFPNCE
Trigger: TTCACAGTTTGGGAAAGTGCAGGTGGTGCCCAGATT...GCTATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp GACATGAATGAACATAGAGCTGCTCTCTTTGCTTTTGGTGTTTCCCTAATTCTCCCTTCTTCAACACCTTaGCATGTTTCAGGGAGGGAC +
Preference number: 4 (lower is better)
Translates to: DMNEHRAALFAFGVSLILPSSTP*HVSGRD
Trigger: GTCCCTCCCTGAAACATGGCAAGGTGTTGAAGAAGG...GAGAATTAGGGAAACACCAAAAGCAAAGAGAGCAGCTCTATGTTCATTCATGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp ATAGTGGGTACCCCAAACTCACTAAAGGCAAAGCTTAAGCAACCATCCTCTTCTTGCAATGACCATGCATaGCACACTCAGAACATTGCT +
Preference number: 4 (lower is better)
Translates to: IVGTPNSLKAKLKQPSSSCNDHA*HTQNIA
Trigger: AGCAATGTTCTGAGTGTGGCATGCATGGTCATTGCA...AGAAGAGGATGGTTGCTTAAGCTTTGCCTTTAGTGAGTTTGGGGTACCCACTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR GCA 90 bp ATGCCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATTCAGGGGGCGCCAATCCACTaGATCTTCTACTATAATTCT +
Preference number: 4 (lower is better)
Translates to: MPCRHNSCLPVLLIELIQGAPIH*IFYYNS
Trigger: AGAATTATAGTAGAAGATGCAGTGGATTGGCGCCCC...CTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp GCCAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATACTGCATTTGGTAGAATaGAGACATCCAGGTCATCGC +
Preference number: 4 (lower is better)
Translates to: AKIPCHMLEPGKLLKMFILHLVE*RHPGHR
Trigger: GCGATGACCTGGATGTCTGCATTCTACCAAATGCAG...TATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp GATGTTTATAGCTGCTATTTAGGCCCAAAGAGTCAATTCTGGCCTCAGGGATCACATCCTGGTCCTCTCTaGTGTTATTGGGTGCATAAT +
Preference number: 4 (lower is better)
Translates to: DVYSCYLGPKSQFWPQGSHPGPL*CYWVHN
Trigger: ATTATGCACCCAATAACAGCAGAGAGGACCAGGATG...TGATCCCTGAGGCCAGAATTGACTCTTTGGGCCTAAATAGCAGCTATAAACATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp CATTCTGGCTGCCATCAATCTCCTCCCAGTCCTCAATCAATTTCTTCTCAATTTCTGCTCAGTGGTTACTaGGTTGAAGAAGGATGCAGT +
Preference number: 4 (lower is better)
Translates to: HSGCHQSPPSPQSISSQFLLSGY*VEEGCS
Trigger: ACTGCATCCTTCTTCAACGCAGTAACCACTGAGCAG...AAATTGAGAAGAAATTGATTGAGGACTGGGAGGAGATTGATGGCAGCCAGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR GCA 90 bp TCACTTCCCCAGCTTATTATCCAGAAATACTGGGAACATTCTGCCTTTCAGGCCATTGCGCTTTCTTTTTaGTCTACTGTCAGCAATGGC +
Preference number: 4 (lower is better)
Translates to: SLPQLIIQKYWEHSAFQAIALSF*STVSNG
Trigger: GCCATTGCTGACAGTAGAGCAAAAAGAAAGCGCAAT...GGCCTGAAAGGCAGAATGTTCCCAGTATTTCTGGATAATAAGCTGGGGAAGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp CCCGTACAAATGTGTGAATTTGGTGAAATTGCCTTTAACAACCTTACCAAATGTGGGAAAGCCCCAAGCTaGCACTTTGCTTACTCAGCC +
Preference number: 4 (lower is better)
Translates to: PVQMCEFGEIAFNNLTKCGKAPS*HFAYSA
Trigger: GGCTGAGTAAGCAAAGTGGCAGCTTGGGGCTTTCCC...ACATTTGGTAAGGTTGTTAAAGGCAATTTCACCAAATTCACACATTTGTACGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp TCACTTCCCCAGCTTATTATCCAGAAATACTGGGAACATTCTGCCTTTCAGGCCCTTTCTCTCTTCCAATaGAACTACACAACAACCCCT +
Preference number: 4 (lower is better)
Translates to: SLPQLIIQKYWEHSAFQALSLFQ*NYTTTP
Trigger: AGGGGTTGTTGTGTAGTTGCATTGGAAGAGAGAAAG...GGCCTGAAAGGCAGAATGTTCCCAGTATTTCTGGATAATAAGCTGGGGAAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp GACATGAATGAACATAGAGCTGCTCTCTTTGCTTTTGGTGTTTCCCTAATTCTCGTTGGCCTACAGTGGTaGTCAAATTGGCTCATCTCC +
Preference number: 4 (lower is better)
Translates to: DMNEHRAALFAFGVSLILVGLQW*SNWLIS
Trigger: GGAGATGAGCCAATTTGAGCACCACTGTAGGCCAAC...GAGAATTAGGGAAACACCAAAAGCAAAGAGAGCAGCTCTATGTTCATTCATGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp ATGCCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATTCAGGGTGTAGATTGTCACTaGTGGGAAATATTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: MPCRHNSCLPVLLIELIQGVDCH*WEIFAG
Trigger: CCCAGCAAATATTTCCCAGCAGTGACAATCTACACC...CTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp GACATGAATGAACATAGAGCTGCTCTCTTTGCTTTTGGTGTTTCCCTAATTCTCCGTGGACATGTTATCTaGTTAGAGCTCAGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: DMNEHRAALFAFGVSLILRGHVI*LELSLQ
Trigger: CTGCAGGCTGAGCTCTAACCAGATAACATGTCCACG...GAGAATTAGGGAAACACCAAAAGCAAAGAGAGCAGCTCTATGTTCATTCATGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp CCATCCTCTTCTTTCCTACTCCCCCATATCTGCTACTGGAACTTCCATTCCCAATCTGTCAAGAATCCGTaGACATGTTATCTGGTTAGA +
Preference number: 4 (lower is better)
Translates to: PSSSFLLPHICYWNFHSQSVKNP*TCYLVR
Trigger: TCTAACCAGATAACATGTCCACGGATTCTTGACAGA...TTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGAGTAGGAAAGAAGAGGATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp CATTCTGGCTGCCATCAATCTCCTCCCAGTCCTCAATCAATTTCTTCTCAATTTAAACTTGGTGAACGATaGGTGTCTGCGCCTTGGAAA +
Preference number: 4 (lower is better)
Translates to: HSGCHQSPPSPQSISSQFKLGER*VSAPWK
Trigger: TTTCCAAGGCGCAGACACCCATCGTTCACCAAGTTT...AAATTGAGAAGAAATTGATTGAGGACTGGGAGGAGATTGATGGCAGCCAGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp GAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGTCTGATTTTGCAATTACCTGTACCCTGGGGTaGCTTCAGTCAGTTCCAGTC +
Preference number: 4 (lower is better)
Translates to: ELFISYCLRSWPRSDFAITCTLG*LQSVPV
Trigger: GACTGGAACTGACTGAAGCCACCCCAGGGTACAGGT...AATTGCAAAATCAGACCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp CAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATAGCGGCATTTGCAGGGATTaGCTGACTAGAGACATTGTC +
Preference number: 4 (lower is better)
Translates to: QNSMPHARAWQVTEDVYSGICRD*LTRDIV
Trigger: GACAATGTCTCTAGTCAGCCAATCCCTGCAAATGCC...GCTATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp CCATCCTCTTCTTTCCTACTCCCCCATATCTGCTACTGGAACTTCCATTCCCAAGACTCCAGTCACAGGTaGTATTCTTTACCATGTTTT +
Preference number: 4 (lower is better)
Translates to: PSSSFLLPHICYWNFHSQDSSHR*YSLPCF
Trigger: AAAACATGGTAAAGAATACCACCTGTGACTGGAGTC...TTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGAGTAGGAAAGAAGAGGATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp TTCAACACCACCAATTTAATATCTGAATTGCTCCTCTCTCATATAGTGGGTACCCATATACCACACGCGTaGCTGCAGCAGGATTCACTC +
Preference number: 4 (lower is better)
Translates to: FNTTNLISELLLSHIVGTHIPHA*LQQDSL
Trigger: GAGTGAATCCTGCTGCAGCCACGCGTGTGGTATATG...GGTACCCACTATATGAGAGAGGAGCAATTCAGATATTAAATTGGTGGTGTTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp GAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGTCTGATTTTGCAATTGAGACGGAAATTCTGTaGAGACCAGCTGGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: ELFISYCLRSWPRSDFAIETEIL*RPAGSG
Trigger: CCCACTGCCAGCTGGTCTCCACAGAATTTCCGTCTC...AATTGCAAAATCAGACCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp CTTCTTTCCTACTCCCCCATATCTGCTACTGGAACTTCCATTCCCAAAGATATCTGGCAGAGAATGGTGTaGTCTCCCAAACTCAAAATC +
Preference number: 4 (lower is better)
Translates to: LLSYSPISATGTSIPKDIWQRMV*SPKLKI
Trigger: GATTTTGAGTTTGGGAGACCACACCATTCTCTGCCA...GATATCTTTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGAGTAGGAAAGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp AGCCTGAAGATCTGCAATACTCACCAGATGCCTAAAGAAGAGGTTAAAACATTTGCCAAGTCTCTTGTCTaGCACACAACGTGGCTTGCA +
Preference number: 4 (lower is better)
Translates to: SLKICNTHQMPKEEVKTFAKSLV*HTTWLA
Trigger: TGCAAGCCACGTTGTGTGCCAGACAAGAGACTTGGC...AAATGTTTTAACCTCTTCTTTAGGCATCTGGTGAGTATTGCAGATCTTCAGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp ATAGTGGGTACCCCAAACTCACTAAAGGCAAAGCTTAAGCAACCATCCTCTTCTAATCTTGACGGTAATTaGCTGATTGGGCGTCTCACA +
Preference number: 4 (lower is better)
Translates to: IVGTPNSLKAKLKQPSSSNLDGN*LIGRLT
Trigger: TGTGAGACGCCCAATCAGCCAATTACCGTCAAGATT...AGAAGAGGATGGTTGCTTAAGCTTTGCCTTTAGTGAGTTTGGGGTACCCACTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp GACATGAATGAACATAGAGCTGCTCTCTTTGCTTTTGGTGTTTCCCTAATTCTCTCCAGCAGAAGCAATTaGCCATTCTCCACTGTGACG +
Preference number: 4 (lower is better)
Translates to: DMNEHRAALFAFGVSLILSSRSN*PFSTVT
Trigger: CGTCACAGTGGAGAATGGCCAATTGCTTCTGCTGGA...GAGAATTAGGGAAACACCAAAAGCAAAGAGAGCAGCTCTATGTTCATTCATGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp TTCAACACCACCAATTTAATATCTGAATTGCTCCTCTCTCATATAGTGGGTACCGGAGCATTGGCCTCCTaGCATGAAACAAGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: FNTTNLISELLLSHIVGTGALAS*HETSSF
Trigger: GAAGCTGCTTGTTTCATGCCAGGAGGCCAATGCTCC...GGTACCCACTATATGAGAGAGGAGCAATTCAGATATTAAATTGGTGGTGTTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp ATGCCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATTCAGTCGGCACCAGAAACCTaGATGATCACGTTGTTTCTT +
Preference number: 4 (lower is better)
Translates to: MPCRHNSCLPVLLIELIQSAPET*MITLFL
Trigger: AAGAAACAACGTGATCATCCAGGTTTCTGGTGCCGA...CTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp GACATGAATGAACATAGAGCTGCTCTCTTTGCTTTTGGTGTTTCCCTAATTCTCTCAACATTTCAGGATTaGAGAGTCCCTCGGCACCAG +
Preference number: 4 (lower is better)
Translates to: DMNEHRAALFAFGVSLILSTFQD*RVPRHQ
Trigger: CTGGTGCCGAGGGACTCTCCAATCCTGAAATGTTGA...GAGAATTAGGGAAACACCAAAAGCAAAGAGAGCAGCTCTATGTTCATTCATGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp TTGAGGGTCAATAAGGCTCTGGGGGAACCAATTCCTCAAATCACACTGTATCTGGGAGCTTGTGATGTTTaGTTGGTCATGAGATGGAAA +
Preference number: 4 (lower is better)
Translates to: LRVNKALGEPIPQITLYLGACDV*LVMRWK
Trigger: TTTCCATCTCATGACCAACCAAACATCACAAGCTCC...CAGATACAGTGTGATTTGAGGAATTGGTTCCCCCAGAGCCTTATTGACCCTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp CCATCCTCTTCTTTCCTACTCCCCCATATCTGCTACTGGAACTTCCATTCCCAACAAAGAGACCATACCTaGTACAAGAATGTGCAATGT +
Preference number: 4 (lower is better)
Translates to: PSSSFLLPHICYWNFHSQQRDHT*YKNVQC
Trigger: ACATTGCACATTCTTGTACCAGGTATGGTCTCTTTG...TTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGAGTAGGAAAGAAGAGGATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp CCATCCTCTTCTTTCCTACTCCCCCATATCTGCTACTGGAACTTCCATTCCCAAGACATTATCCCAAGGTaGCTGAAATTTAGGGTATAC +
Preference number: 4 (lower is better)
Translates to: PSSSFLLPHICYWNFHSQDIIPR*LKFRVY
Trigger: GTATACCCTAAATTTCAGCCACCTTGGGATAATGTC...TTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGAGTAGGAAAGAAGAGGATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp GACATGAATGAACATAGAGCTGCTCTCTTTGCTTTTGGTGTTTCCCTAATTCTCCAAACTGTGAAGCTCTaGAACAGAGTGGTGCCAGTG +
Preference number: 4 (lower is better)
Translates to: DMNEHRAALFAFGVSLILQTVKL*NRVVPV
Trigger: CACTGGCACCACTCTGTTCCAGAGCTTCACAGTTTG...GAGAATTAGGGAAACACCAAAAGCAAAGAGAGCAGCTCTATGTTCATTCATGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp CCTTCTATAAAAGAAGCTCAAAGCATTGTGGGTGGTCAATCCAGAGAATGCTTAAAAGTACTCCATGACTaGCAGCTGCATGAATGCCCC +
Preference number: 4 (lower is better)
Translates to: PSIKEAQSIVGGQSRECLKVLHD*QLHECP
Trigger: GGGGCATTCATGCAGCTGCCAGTCATGGAGTACTTT...TAAGCATTCTCTGGATTGACCACCCACAATGCTTTGAGCTTCTTTTATAGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp CTTCTTTCCTACTCCCCCATATCTGCTACTGGAACTTCCATTCCCAAAGATATCTCTAAATCTATGCCATaGCCAGCTGTGCCAAACACA +
Preference number: 4 (lower is better)
Translates to: LLSYSPISATGTSIPKDISKSMP*PAVPNT
Trigger: TGTGTTTGGCACAGCTGGCCATGGCATAGATTTAGA...GATATCTTTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGAGTAGGAAAGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp CTTCTTTCCTACTCCCCCATATCTGCTACTGGAACTTCCATTCCCAAAGATATCTTGATGTCCTTTACCTaGTTCACTTTGATTCCCGCC +
Preference number: 4 (lower is better)
Translates to: LLSYSPISATGTSIPKDILMSFT*FTLIPA
Trigger: GGCGGGAATCAAAGTGAACCAGGTAAAGGACATCAA...GATATCTTTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGAGTAGGAAAGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp ATGCCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATTCAGAGAAGCCAGAGATTCTaGTACAGTTGTCAAGTCCAC +
Preference number: 4 (lower is better)
Translates to: MPCRHNSCLPVLLIELIQRSQRF*YSCQVH
Trigger: GTGGACTTGACAACTGTACCAGAATCTCTGGCTTCT...CTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp TTCAACACCACCAATTTAATATCTGAATTGCTCCTCTCTCATATAGTGGGTACCCCTCACTTTGTGCCATaGCTCCTGAGGCCACTGATT +
Preference number: 4 (lower is better)
Translates to: FNTTNLISELLLSHIVGTPHFVP*LLRPLI
Trigger: AATCAGTGGCCTCAGGAGCCATGGCACAAAGTGAGG...GGTACCCACTATATGAGAGAGGAGCAATTCAGATATTAAATTGGTGGTGTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp GACATGAATGAACATAGAGCTGCTCTCTTTGCTTTTGGTGTTTCCCTAATTCTCAAATACAGAAACTGGTaGAGGCAGACCCAGGGCTCT +
Preference number: 4 (lower is better)
Translates to: DMNEHRAALFAFGVSLILKYRNW*RQTQGS
Trigger: AGAGCCCTGGGTCTGCCTCCACCAGTTTCTGTATTT...GAGAATTAGGGAAACACCAAAAGCAAAGAGAGCAGCTCTATGTTCATTCATGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp TTCAACACCACCAATTTAATATCTGAATTGCTCCTCTCTCATATAGTGGGTACCAGGAAATACAGAAACTaGTGGAGGCAGACCCAGGGC +
Preference number: 4 (lower is better)
Translates to: FNTTNLISELLLSHIVGTRKYRN*WRQTQG
Trigger: GCCCTGGGTCTGCCTCCACCAGTTTCTGTATTTCCT...GGTACCCACTATATGAGAGAGGAGCAATTCAGATATTAAATTGGTGGTGTTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp ACACTGGGCACATGGGAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGACAAGTCTTTCCATTTaGTCCATGCTCCAACCCATT +
Preference number: 4 (lower is better)
Translates to: TLGTWELFISYCLRSWPRTSLSI*SMLQPI
Trigger: AATGGGTTGGAGCATGGACCAAATGGAAAGACTTGT...CCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTCCCATGTGCCCAGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp TTCAACACCACCAATTTAATATCTGAATTGCTCCTCTCTCATATAGTGGGTACCCCATCCTCTCCATTCTaGCTGCCATCAATCTCCTCC +
Preference number: 4 (lower is better)
Translates to: FNTTNLISELLLSHIVGTPSSPF*LPSISS
Trigger: GGAGGAGATTGATGGCAGCCAGAATGGAGAGGATGG...GGTACCCACTATATGAGAGAGGAGCAATTCAGATATTAAATTGGTGGTGTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp GTTATTCCTACGCAGAGGGATAGGATAAAACATGCCTCCCAGAAAGACTGGTCTTCTGAATTGCCCAAATaGCATCAGCGCTATCAAGAA +
Preference number: 4 (lower is better)
Translates to: VIPTQRDRIKHASQKDWSSELPK*HQRYQE
Trigger: TTCTTGATAGCGCTGATGCCATTTGGGCAATTCAGA...AGACCAGTCTTTCTGGGAGGCATGTTTTATCCTATCCCTCTGCGTAGGAATAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp TCACTTCCCCAGCTTATTATCCAGAAATACTGGGAACATTCTGCCTTTCAGGCCGTGATTCTCGGCGTTTaGATGAGATGTGGATATGAA +
Preference number: 4 (lower is better)
Translates to: SLPQLIIQKYWEHSAFQAVILGV*MRCGYE
Trigger: TTCATATCCACATCTCATCCAAACGCCGAGAATCAC...GGCCTGAAAGGCAGAATGTTCCCAGTATTTCTGGATAATAAGCTGGGGAAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp AGCCTGAAGATCTGCAATACTCACCAGATGCCTAAAGAAGAGGTTAAAACATTTACTCCATTCATCAACTaGTGGGGGCACTGGTTCACC +
Preference number: 4 (lower is better)
Translates to: SLKICNTHQMPKEEVKTFTPFIN*WGHWFT
Trigger: GGTGAACCAGTGCCCCCACCAGTTGATGAATGGAGT...AAATGTTTTAACCTCTTCTTTAGGCATCTGGTGAGTATTGCAGATCTTCAGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp TCACTTCCCCAGCTTATTATCCAGAAATACTGGGAACATTCTGCCTTTCAGGCCTCAAAGCATTGTGGGTaGTCAATCCAGAGAATGCTT +
Preference number: 4 (lower is better)
Translates to: SLPQLIIQKYWEHSAFQASKHCG*SIQRML
Trigger: AAGCATTCTCTGGATTGACCACCCACAATGCTTTGA...GGCCTGAAAGGCAGAATGTTCCCAGTATTTCTGGATAATAAGCTGGGGAAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp GATGTTTATAGCTGCTATTTAGGCCCAAAGAGTCAATTCTGGCCTCAGGGATCACCACATGCTAGAGCCTaGCAAGTTACTGAAGATGTT +
Preference number: 4 (lower is better)
Translates to: DVYSCYLGPKSQFWPQGSPHARA*QVTEDV
Trigger: AACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGG...TGATCCCTGAGGCCAGAATTGACTCTTTGGGCCTAAATAGCAGCTATAAACATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp CAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATAGCCTGAGTCTCGCACTCTaGAAGAGACTTGAAGTTCTG +
Preference number: 4 (lower is better)
Translates to: QNSMPHARAWQVTEDVYSLSLAL*KRLEVL
Trigger: CAGAACTTCAAGTCTCTTCCAGAGTGCGAGACTCAG...GCTATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp TCCCCCATATCTGCTACTGGAACTTCCATTCCCAAAGATATCCTGACTACGGACAAGCATTTTCAGTTTTaGTTGGAGCAGCATAGCTTT +
Preference number: 4 (lower is better)
Translates to: SPISATGTSIPKDILTTDKHFQF*LEQHSF
Trigger: AAAGCTATGCTGCTCCAATCAAAACTGAAAATGCTT...GTCCGTAGTCAGGATATCTTTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp CCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATTCAGGGCAAGCATTTTCAGTTTTaGTTGGAGCAGCATAGCTTT +
Preference number: 4 (lower is better)
Translates to: PCRHNSCLPVLLIELIQGKHFQF*LEQHSF
Trigger: AAAGCTATGCTGCTCCAATCAAAACTGAAAATGCTT...GCCCTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp CCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATTCAGGGCTCCTTTGTTAAATACTaGGAAGCTAACATTCTGGGA +
Preference number: 4 (lower is better)
Translates to: PCRHNSCLPVLLIELIQGSFVKY*EANILG
Trigger: TCCCAGAATGTTAGCTTCTCAGTATTTAACAAAGGA...GCCCTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp CCATCCTCTTCTTTCCTACTCCCCCATATCTGCTACTGGAACTTCCATTCCCAACTTCTTGTGGACCATTaGCTTTCCTTTGTTAAATAC +
Preference number: 4 (lower is better)
Translates to: PSSSFLLPHICYWNFHSQLLVDH*LSFVKY
Trigger: GTATTTAACAAAGGAAAGTCAATGGTCCACAAGAAG...TTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGAGTAGGAAAGAAGAGGATGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp TTCAACACCACCAATTTAATATCTGAATTGCTCCTCTCTCATATAGTGGGTACCTTCAGCCAGGTGTTGTaGATCTGGACACCAATCCTC +
Preference number: 4 (lower is better)
Translates to: FNTTNLISELLLSHIVGTFSQVL*IWTPIL
Trigger: GAGGATTGGTGTCCAGATTCACAACACCTGGCTGAA...GGTACCCACTATATGAGAGAGGAGCAATTCAGATATTAAATTGGTGGTGTTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp TTGAGGGTCAATAAGGCTCTGGGGGAACCAATTCCTCAAATCACACTGTATCTGTTCTTTACCATGTTTTaGAAGCCGATTGTGAAGGAC +
Preference number: 4 (lower is better)
Translates to: LRVNKALGEPIPQITLYLFFTMF*KPIVKD
Trigger: GTCCTTCACAATCGGCTTTCAAAACATGGTAAAGAA...CAGATACAGTGTGATTTGAGGAATTGGTTCCCCCAGAGCCTTATTGACCCTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp AGCCTGAAGATCTGCAATACTCACCAGATGCCTAAAGAAGAGGTTAAAACATTTCAGGAACCTGGGCAATaGGCTGGTACATCATTCACT +
Preference number: 4 (lower is better)
Translates to: SLKICNTHQMPKEEVKTFQEPGQ*AGTSFT
Trigger: AGTGAATGATGTACCAGCTCATTGCCCAGGTTCCTG...AAATGTTTTAACCTCTTCTTTAGGCATCTGGTGAGTATTGCAGATCTTCAGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp ATAGTGGGTACCCCAAACTCACTAAAGGCAAAGCTTAAGCAACCATCCTCTTCTGGTGGAACTTTGCACTaGATTCTGCTTGAATTGCTT +
Preference number: 4 (lower is better)
Translates to: IVGTPNSLKAKLKQPSSSGGTLH*ILLELL
Trigger: AAGCAATTCAAGCAGAATTCAGTGCAAAGTTCCACC...AGAAGAGGATGGTTGCTTAAGCTTTGCCTTTAGTGAGTTTGGGGTACCCACTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp TTGAGGGTCAATAAGGCTCTGGGGGAACCAATTCCTCAAATCACACTGTATCTGACATTGCAAGGAAGTTaGTCATCCACAAATACCATC +
Preference number: 4 (lower is better)
Translates to: LRVNKALGEPIPQITLYLTLQGS*SSTNTI
Trigger: GATGGTATTTGTGGATGATCAACTTCCTTGCAATGT...CAGATACAGTGTGATTTGAGGAATTGGTTCCCCCAGAGCCTTATTGACCCTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp CCCGTACAAATGTGTGAATTTGGTGAAATTGCCTTTAACAACCTTACCAAATGTGAACAATGCACCGGATaGGCTCAGCACCGATGTTCA +
Preference number: 4 (lower is better)
Translates to: PVQMCEFGEIAFNNLTKCEQCTG*AQHRCS
Trigger: TGAACATCGGTGCTGAGCTCATCCGGTGCATTGTTC...ACATTTGGTAAGGTTGTTAAAGGCAATTTCACCAAATTCACACATTTGTACGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp GATGTTTATAGCTGCTATTTAGGCCCAAAGAGTCAATTCTGGCCTCAGGGATCATGTAATAATAACTCTTaGGGTGAACACCAGGGCAGA +
Preference number: 4 (lower is better)
Translates to: DVYSCYLGPKSQFWPQGSCNNNS*GEHQGR
Trigger: TCTGCCCTGGTGTTCACCTCAAGAGTTATTATTACA...TGATCCCTGAGGCCAGAATTGACTCTTTGGGCCTAAATAGCAGCTATAAACATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp CCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATTCAGGGCTTCTCTGTAAAGTTGTaGGAATATCTCAAAGGTGAC +
Preference number: 4 (lower is better)
Translates to: PCRHNSCLPVLLIELIQGFSVKL*EYLKGD
Trigger: GTCACCTTTGAGATATTCTCACAACTTTACAGAGAA...GCCCTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp ACACTGGGCACATGGGAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGTTATCCCAAGGTGGCTaGAATTTAGGGTATACAAAG +
Preference number: 4 (lower is better)
Translates to: TLGTWELFISYCLRSWPRLSQGG*NLGYTK
Trigger: CTTTGTATACCCTAAATTTCAGCCACCTTGGGATAA...CCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTCCCATGTGCCCAGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp CCCGTACAAATGTGTGAATTTGGTGAAATTGCCTTTAACAACCTTACCAAATGTACAGAGTGGTGCCAGTaGCATTATCCCAAGGTGGCT +
Preference number: 4 (lower is better)
Translates to: PVQMCEFGEIAFNNLTKCTEWCQ*HYPKVA
Trigger: AGCCACCTTGGGATAATGTCACTGGCACCACTCTGT...ACATTTGGTAAGGTTGTTAAAGGCAATTTCACCAAATTCACACATTTGTACGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp ATGGCACACTGTTCCAATAATGGAACACTGGGCACATGGGAGTTATTTATATCCCCCTTGTGGGCAAAATaGCCAAGTAATAAGCTGTCA +
Preference number: 4 (lower is better)
Translates to: MAHCSNNGTLGTWELFISPLWAK*PSNKLS
Trigger: TGACAGCTTATTACTTGGTCATTTTGCCCACAAGGG...GGATATAAATAACTCCCATGTGCCCAGTGTTCCATTATTGGAACAGTGTGCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp ATGGCACACTGTTCCAATAATGGAACACTGGGCACATGGGAGTTATTTATATCCAACCCGACCAAAGCTTaGATTGACCAAACAAGAAGC +
Preference number: 4 (lower is better)
Translates to: MAHCSNNGTLGTWELFISNPTKA*IDQTRS
Trigger: GCTTCTTGTTTGGTCAATTCAAGCTTTGGTCGGGTT...GGATATAAATAACTCCCATGTGCCCAGTGTTCCATTATTGGAACAGTGTGCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp ATAGTGGGTACCCCAAACTCACTAAAGGCAAAGCTTAAGCAACCATCCTCTTCTGTTCCTGGGTCAATATaGATTCCATTCATACGGTCA +
Preference number: 4 (lower is better)
Translates to: IVGTPNSLKAKLKQPSSSVPGSI*IPFIRS
Trigger: TGACCGTATGAATGGAATTCATATTGACCCAGGAAC...AGAAGAGGATGGTTGCTTAAGCTTTGCCTTTAGTGAGTTTGGGGTACCCACTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp ATAGTGGGTACCCCAAACTCACTAAAGGCAAAGCTTAAGCAACCATCCTCTTCTGGTGACCCGAAGTTCTaGATTTCCACATTAAGAAGT +
Preference number: 4 (lower is better)
Translates to: IVGTPNSLKAKLKQPSSSGDPKF*ISTLRS
Trigger: ACTTCTTAATGTGGAAATTCAGAACTTCGGGTCACC...AGAAGAGGATGGTTGCTTAAGCTTTGCCTTTAGTGAGTTTGGGGTACCCACTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp ATGCCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATTCAGGGTGACCCGAAGTTCTaGATTTCCACATTAAGAAGT +
Preference number: 4 (lower is better)
Translates to: MPCRHNSCLPVLLIELIQGDPKF*ISTLRS
Trigger: ACTTCTTAATGTGGAAATTCAGAACTTCGGGTCACC...CTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp CCCGTACAAATGTGTGAATTTGGTGAAATTGCCTTTAACAACCTTACCAAATGTAAAGCCAAGTCTCTCTaGTCCTGCCACAACGTTGCC +
Preference number: 4 (lower is better)
Translates to: PVQMCEFGEIAFNNLTKCKAKSL*SCHNVA
Trigger: GGCAACGTTGTGGCAGGATCAGAGAGACTTGGCTTT...ACATTTGGTAAGGTTGTTAAAGGCAATTTCACCAAATTCACACATTTGTACGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp CCTTCTATAAAAGAAGCTCAAAGCATTGTGGGTGGTCAATCCAGAGAATGCTTAAAGGCCATGAAGACTTaGATGCGCCACATTGTCAGA +
Preference number: 4 (lower is better)
Translates to: PSIKEAQSIVGGQSRECLKAMKT*MRHIVR
Trigger: TCTGACAATGTGGCGCATTCAAGTCTTCATGGCCTT...TAAGCATTCTCTGGATTGACCACCCACAATGCTTTGAGCTTCTTTTATAGAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp CAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATAGCGGCTTCACTTTGTCCTaGATGCAGTCAAAAGAAGAG +
Preference number: 4 (lower is better)
Translates to: QNSMPHARAWQVTEDVYSGFTLS*MQSKEE
Trigger: CTCTTCTTTTGACTGCATTCAGGACAAAGTGAAGCC...GCTATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp ATGGCACACTGTTCCAATAATGGAACACTGGGCACATGGGAGTTATTTATATCCGATTTGGTTCTGAGGTaGATACAGGCCACAGAATAC +
Preference number: 4 (lower is better)
Translates to: MAHCSNNGTLGTWELFISDLVLR*IQATEY
Trigger: GTATTCTGTGGCCTGTATTCACCTCAGAACCAAATC...GGATATAAATAACTCCCATGTGCCCAGTGTTCCATTATTGGAACAGTGTGCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp GCCAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATATGGCCAGGCATCTCGTaGATAAACCTGATTTGGTTT +
Preference number: 4 (lower is better)
Translates to: AKIPCHMLEPGKLLKMFIWPGIS*INLIWF
Trigger: AAACCAAATCAGGTTTATTCACGAGATGCCTGGCCA...TATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp GCCAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATAAGTTCATTTCCATCATaGGAGGCCTACGTTGACCAA +
Preference number: 4 (lower is better)
Translates to: AKIPCHMLEPGKLLKMFISSFPS*EAYVDQ
Trigger: TTGGTCAACGTAGGCCTCTCATGATGGAAATGAACT...TATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp GTTATTCCTACGCAGAGGGATAGGATAAAACATGCCTCCCAGAAAGACTGGTCTCATGAAGTGCAAATTTaGTACGCTCACACTACTGTA +
Preference number: 4 (lower is better)
Translates to: VIPTQRDRIKHASQKDWSHEVQI*YAHTTV
Trigger: TACAGTAGTGTGAGCGTATCAAATTTGCACTTCATG...AGACCAGTCTTTCTGGGAGGCATGTTTTATCCTATCCCTCTGCGTAGGAATAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp GATGTTTATAGCTGCTATTTAGGCCCAAAGAGTCAATTCTGGCCTCAGGGATCATTGCAAATCATTCCCTaGACACAGATAGCCTGGATT +
Preference number: 4 (lower is better)
Translates to: DVYSCYLGPKSQFWPQGSLQIIP*TQIAWI
Trigger: AATCCAGGCTATCTGTGTTCAGGGAATGATTTGCAA...TGATCCCTGAGGCCAGAATTGACTCTTTGGGCCTAAATAGCAGCTATAAACATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp CCCGTACAAATGTGTGAATTTGGTGAAATTGCCTTTAACAACCTTACCAAATGTGAAAGGGGAAGGCCCTaGGAGAGCTCAACTGTTCTT +
Preference number: 4 (lower is better)
Translates to: PVQMCEFGEIAFNNLTKCERGRP*ESSTVL
Trigger: AAGAACAGTTGAGCTCTCTCAGGGCCTTCCCCTTTC...ACATTTGGTAAGGTTGTTAAAGGCAATTTCACCAAATTCACACATTTGTACGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp ATGCCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATTCAGATTCAACTAAATTGTTaGAAGGGGAAGGCCCTGAGA +
Preference number: 4 (lower is better)
Translates to: MPCRHNSCLPVLLIELIQIQLNC*KGKALR
Trigger: TCTCAGGGCCTTCCCCTTTCAACAATTTAGTTGAAT...CTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp GCCAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATAGGAAGAAGTTTCCTCTaGCTGATACATTCAGCACCT +
Preference number: 4 (lower is better)
Translates to: AKIPCHMLEPGKLLKMFIGRSFL*LIHSAP
Trigger: AGGTGCTGAATGTATCAGGCAGAGGAAACTTCTTCC...TATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp CATTCTGGCTGCCATCAATCTCCTCCCAGTCCTCAATCAATTTCTTCTCAATTTCCCTGGGTGGAACTTTaGACTGAATTCTGCTTGAAT +
Preference number: 4 (lower is better)
Translates to: HSGCHQSPPSPQSISSQFPWVEL*TEFCLN
Trigger: ATTCAAGCAGAATTCAGTGCAAAGTTCCACCCAGGG...AAATTGAGAAGAAATTGATTGAGGACTGGGAGGAGATTGATGGCAGCCAGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR GCA 90 bp GACATGAATGAACATAGAGCTGCTCTCTTTGCTTTTGGTGTTTCCCTAATTCTCGGCATCACTGCAAATTaGTGGAGCACCACAGACATA +
Preference number: 4 (lower is better)
Translates to: DMNEHRAALFAFGVSLILGITAN*WSTTDI
Trigger: TATGTCTGTGGTGCTCCAGCAATTTGCAGTGATGCC...GAGAATTAGGGAAACACCAAAAGCAAAGAGAGCAGCTCTATGTTCATTCATGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp TCTCATATAGTGGGTACCCCAAACTCACTAAAGGCAAAGCTTAAGCAACCATCCATCCATGACAGGACTTaGCTCTTCCCTTATGAAAAG +
Preference number: 4 (lower is better)
Translates to: SHIVGTPNSLKAKLKQPSIHDRT*LFPYEK
Trigger: CTTTTCATAAGGGAAGAGGCAAGTCCTGTCATGGAT...GGATGGTTGCTTAAGCTTTGCCTTTAGTGAGTTTGGGGTACCCACTATATGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR GCA 90 bp GATGTTTATAGCTGCTATTTAGGCCCAAAGAGTCAATTCTGGCCTCAGGGATCATTGCCCCCTTTAATGTaGAGTAAGTTGAGGATGCTT +
Preference number: 4 (lower is better)
Translates to: DVYSCYLGPKSQFWPQGSLPPLM*SKLRML
Trigger: AAGCATCCTCAACTTACTGCACATTAAAGGGGGCAA...TGATCCCTGAGGCCAGAATTGACTCTTTGGGCCTAAATAGCAGCTATAAACATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp CATTCTGGCTGCCATCAATCTCCTCCCAGTCCTCAATCAATTTCTTCTCAATTTTCTGGTAGTGAACCGTaGAGAGAAAGAGTTCCATTC +
Preference number: 4 (lower is better)
Translates to: HSGCHQSPPSPQSISSQFSGSEP*RERVPF
Trigger: GAATGGAACTCTTTCTCTGCACGGTTCACTACCAGA...AAATTGAGAAGAAATTGATTGAGGACTGGGAGGAGATTGATGGCAGCCAGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR GCA 90 bp TCACTTCCCCAGCTTATTATCCAGAAATACTGGGAACATTCTGCCTTTCAGGCCATGGAATACAAACAGTaGTGCAGATTACCTTCTGGA +
Preference number: 4 (lower is better)
Translates to: SLPQLIIQKYWEHSAFQAMEYKQ*CRLPSG
Trigger: TCCAGAAGGTAATCTGCAGCACTGTTTGTATTCCAT...GGCCTGAAAGGCAGAATGTTCCCAGTATTTCTGGATAATAAGCTGGGGAAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp TGGGAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGTCTGATTTTGCAAATCTGGGCACCACCTaGACTTTCCCAAACTGTGAA +
Preference number: 4 (lower is better)
Translates to: WELFISYCLRSWPRSDFANLGTT*TFPNCE
Trigger: TTCACAGTTTGGGAAAGTGCAGGTGGTGCCCAGATT...TGCAAAATCAGACCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR GCA 90 bp CATTCTGGCTGCCATCAATCTCCTCCCAGTCCTCAATCAATTTCTTCTCAATTTTGCCATGGCCAGCTGTaGCAAACACAATATTGTCAT +
Preference number: 4 (lower is better)
Translates to: HSGCHQSPPSPQSISSQFCHGQL*QTQYCH
Trigger: ATGACAATATTGTGTTTGGCACAGCTGGCCATGGCA...AAATTGAGAAGAAATTGATTGAGGACTGGGAGGAGATTGATGGCAGCCAGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR GCA 90 bp CATTCTGGCTGCCATCAATCTCCTCCCAGTCCTCAATCAATTTCTTCTCAATTTGAAATCTTCAAAGCCTaGTCAGTGGTTACTGCGTTG +
Preference number: 4 (lower is better)
Translates to: HSGCHQSPPSPQSISSQFEIFKA*SVVTAL
Trigger: CAACGCAGTAACCACTGAGCAGGCTTTGAAGATTTC...AAATTGAGAAGAAATTGATTGAGGACTGGGAGGAGATTGATGGCAGCCAGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR GCA 90 bp CATTCTGGCTGCCATCAATCTCCTCCCAGTCCTCAATCAATTTCTTCTCAATTTTTTCCATTTGGTCCATaGTCCAACCCATTCTTCACC +
Preference number: 4 (lower is better)
Translates to: HSGCHQSPPSPQSISSQFFPFGP*SNPFFT
Trigger: GGTGAAGAATGGGTTGGAGCATGGACCAAATGGAAA...AAATTGAGAAGAAATTGATTGAGGACTGGGAGGAGATTGATGGCAGCCAGAATG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR GCA 90 bp TGGGAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGTCTGATTTTGCACTACTCCCCCATATCTaGTACTGGAACTTCCATTCC +
Preference number: 4 (lower is better)
Translates to: WELFISYCLRSWPRSDFALLPHI*YWNFHS
Trigger: GGAATGGAAGTTCCAGTAGCAGATATGGGGGAGTAG...TGCAAAATCAGACCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTCCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR GCA 90 bp CCCGTACAAATGTGTGAATTTGGTGAAATTGCCTTTAACAACCTTACCAAATGTTGCCCTGGCAACTGCTaGCTCTCTTGTCTGAAGTCT +
Preference number: 4 (lower is better)
Translates to: PVQMCEFGEIAFNNLTKCCPGNC*LSCLKS
Trigger: AGACTTCAGACAAGAGAGGCAGCAGTTGCCAGGGCA...ACATTTGGTAAGGTTGTTAAAGGCAATTTCACCAAATTCACACATTTGTACGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp CCTTCTATAAAAGAAGCTCAAAGCATTGTGGGTGGTCAATCCAGAGAATGCTTAGACAGCCTGAAGATCTaGAATACTCACCAGATGCCT +
Preference number: 4 (lower is better)
Translates to: PSIKEAQSIVGGQSRECLDSLKI*NTHQMP
Trigger: AGGCATCTGGTGAGTATTGCAGATCTTCAGGCTGTC...TAAGCATTCTCTGGATTGACCACCCACAATGCTTTGAGCTTCTTTTATAGAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp AGCCTGAAGATCTGCAATACTCACCAGATGCCTAAAGAAGAGGTTAAAACATTTGATGCCAAAATTCCATaGCACATGCTAGAGCCTGGC +
Preference number: 4 (lower is better)
Translates to: SLKICNTHQMPKEEVKTFDAKIP*HMLEPG
Trigger: GCCAGGCTCTAGCATGTGGCATGGAATTTTGGCATC...AAATGTTTTAACCTCTTCTTTAGGCATCTGGTGAGTATTGCAGATCTTCAGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp GATGTTTATAGCTGCTATTTAGGCCCAAAGAGTCAATTCTGGCCTCAGGGATCACTGCTGGGAAATATTTaGTGGGTTACCCATGTTAAC +
Preference number: 4 (lower is better)
Translates to: DVYSCYLGPKSQFWPQGSLLGNI*WVTHVN
Trigger: GTTAACATGGGTAACCCAGCAAATATTTCCCAGCAG...TGATCCCTGAGGCCAGAATTGACTCTTTGGGCCTAAATAGCAGCTATAAACATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp GTTATTCCTACGCAGAGGGATAGGATAAAACATGCCTCCCAGAAAGACTGGTCTTCTGTCAAGAATCCGTaGACATGTTATCTGGTTAGA +
Preference number: 4 (lower is better)
Translates to: VIPTQRDRIKHASQKDWSSVKNP*TCYLVR
Trigger: TCTAACCAGATAACATGTCCACGGATTCTTGACAGA...AGACCAGTCTTTCTGGGAGGCATGTTTTATCCTATCCCTCTGCGTAGGAATAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp CTTCTTTCCTACTCCCCCATATCTGCTACTGGAACTTCCATTCCCAAAGATATCTGGAACACCACTTGGTaGATAAACTTGGTGAACGAT +
Preference number: 4 (lower is better)
Translates to: LLSYSPISATGTSIPKDIWNTTW*INLVND
Trigger: ATCGTTCACCAAGTTTATCCACCAAGTGGTGTTCCA...GATATCTTTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGAGTAGGAAAGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp GCCAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATATCCTGGAACACCACTTaGTGGATAAACTTGGTGAAC +
Preference number: 4 (lower is better)
Translates to: AKIPCHMLEPGKLLKMFISWNTT*WINLVN
Trigger: GTTCACCAAGTTTATCCACCAAGTGGTGTTCCAGGA...TATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp GTTATTCCTACGCAGAGGGATAGGATAAAACATGCCTCCCAGAAAGACTGGTCTGTAATTATTTGTCTCTaGAGCCACAAAGAACCCACT +
Preference number: 4 (lower is better)
Translates to: VIPTQRDRIKHASQKDWSVIICL*SHKEPT
Trigger: AGTGGGTTCTTTGTGGCTCCAGAGACAAATAATTAC...AGACCAGTCTTTCTGGGAGGCATGTTTTATCCTATCCCTCTGCGTAGGAATAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp ACACTGGGCACATGGGAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGCAAGTAACTCCTCAATaGTTGTTTGAATCAGATGGG +
Preference number: 4 (lower is better)
Translates to: TLGTWELFISYCLRSWPRQVTPQ*LFESDG
Trigger: CCCATCTGATTCAAACAACCATTGAGGAGTTACTTG...CCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTCCCATGTGCCCAGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp AGCCTGAAGATCTGCAATACTCACCAGATGCCTAAAGAAGAGGTTAAAACATTTGAGTACCACACAGAATaGACACAGGGAGTTGACCCT +
Preference number: 4 (lower is better)
Translates to: SLKICNTHQMPKEEVKTFEYHTE*TQGVDP
Trigger: AGGGTCAACTCCCTGTGTCCATTCTGTGTGGTACTC...AAATGTTTTAACCTCTTCTTTAGGCATCTGGTGAGTATTGCAGATCTTCAGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp CATTCTGGCTGCCATCAATCTCCTCCCAGTCCTCAATCAATTTCTTCTCAATTTATCTTTCCCCCTGGGTaGAACTTTGCACTGAATTCT +
Preference number: 4 (lower is better)
Translates to: HSGCHQSPPSPQSISSQFIFPPG*NFALNS
Trigger: AGAATTCAGTGCAAAGTTCCACCCAGGGGGAAAGAT...AAATTGAGAAGAAATTGATTGAGGACTGGGAGGAGATTGATGGCAGCCAGAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp CAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATAGCATCTTTCCCCCTGGGTaGAACTTTGCACTGAATTCT +
Preference number: 4 (lower is better)
Translates to: QNSMPHARAWQVTEDVYSIFPPG*NFALNS
Trigger: AGAATTCAGTGCAAAGTTCCACCCAGGGGGAAAGAT...GCTATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp AGCCTGAAGATCTGCAATACTCACCAGATGCCTAAAGAAGAGGTTAAAACATTTAAGGCATCCTGGACGTaGACTTCCACATCCAAATCC +
Preference number: 4 (lower is better)
Translates to: SLKICNTHQMPKEEVKTFKASWT*TSTSKS
Trigger: GGATTTGGATGTGGAAGTCCACGTCCAGGATGCCTT...AAATGTTTTAACCTCTTCTTTAGGCATCTGGTGAGTATTGCAGATCTTCAGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp CCTTCTATAAAAGAAGCTCAAAGCATTGTGGGTGGTCAATCCAGAGAATGCTTAACTTCTGTGAGGTACTaGATGTGGAGATCAACCCCT +
Preference number: 4 (lower is better)
Translates to: PSIKEAQSIVGGQSRECLTSVRY*MWRSTP
Trigger: AGGGGTTGATCTCCACATCCAGTACCTCACAGAAGT...TAAGCATTCTCTGGATTGACCACCCACAATGCTTTGAGCTTCTTTTATAGAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp ACACTGGGCACATGGGAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGATCACTGCAAATTGCTaGAGCACCACAGACATATTA +
Preference number: 4 (lower is better)
Translates to: TLGTWELFISYCLRSWPRITANC*STTDIL
Trigger: TAATATGTCTGTGGTGCTCCAGCAATTTGCAGTGAT...CCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTCCCATGTGCCCAGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp GAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGTCTGATTTTGCAATTGCCAAGTCTCTTGTCTaGCACACAACGTGGCTTGCA +
Preference number: 4 (lower is better)
Translates to: ELFISYCLRSWPRSDFAIAKSLV*HTTWLA
Trigger: TGCAAGCCACGTTGTGTGCCAGACAAGAGACTTGGC...AATTGCAAAATCAGACCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp CAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATAGCAATCTTGACGGTAATTaGCTGATTGGGCGTCTCACA +
Preference number: 4 (lower is better)
Translates to: QNSMPHARAWQVTEDVYSNLDGN*LIGRLT
Trigger: TGTGAGACGCCCAATCAGCCAATTACCGTCAAGATT...GCTATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp TTCAACACCACCAATTTAATATCTGAATTGCTCCTCTCTCATATAGTGGGTACCTCAACATTTCAGGATTaGAGAGTCCCTCGGCACCAG +
Preference number: 4 (lower is better)
Translates to: FNTTNLISELLLSHIVGTSTFQD*RVPRHQ
Trigger: CTGGTGCCGAGGGACTCTCCAATCCTGAAATGTTGA...GGTACCCACTATATGAGAGAGGAGCAATTCAGATATTAAATTGGTGGTGTTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp CCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATTCAGGGCGATATAGATGCCAGATaGTGTCAACATTTCAGGATT +
Preference number: 4 (lower is better)
Translates to: PCRHNSCLPVLLIELIQGDIDAR*CQHFRI
Trigger: AATCCTGAAATGTTGACACCATCTGGCATCTATATC...GCCCTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp CATTCTGGCTGCCATCAATCTCCTCCCAGTCCTCAATCAATTTCTTCTCAATTTCTACTTCTAAAAATCTaGGCACCACCTGCACTTTCC +
Preference number: 4 (lower is better)
Translates to: HSGCHQSPPSPQSISSQFLLLKI*APPALS
Trigger: GGAAAGTGCAGGTGGTGCCCAGATTTTTAGAAGTAG...AAATTGAGAAGAAATTGATTGAGGACTGGGAGGAGATTGATGGCAGCCAGAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp TGGGAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGTCTGATTTTGCAGTGAGTTGCCTCAGCTaGCTATTGAAGAACCAGTCA +
Preference number: 4 (lower is better)
Translates to: WELFISYCLRSWPRSDFAVSCLS*LLKNQS
Trigger: TGACTGGTTCTTCAATAGCCAGCTGAGGCAACTCAC...TGCAAAATCAGACCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp CCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATTCAGGGCTCTCTACATGTAACATaGCACCATAGTCAAAGTTCT +
Preference number: 4 (lower is better)
Translates to: PCRHNSCLPVLLIELIQGSLHVT*HHSQSS
Trigger: AGAACTTTGACTATGGTGCCATGTTACATGTAGAGA...GCCCTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp AGCCTGAAGATCTGCAATACTCACCAGATGCCTAAAGAAGAGGTTAAAACATTTGACCTCCTCTTGGATTaGAGGGAGCTCTATCTGTTG +
Preference number: 4 (lower is better)
Translates to: SLKICNTHQMPKEEVKTFDLLLD*RELYLL
Trigger: CAACAGATAGAGCTCCCTCCAATCCAAGAGGAGGTC...AAATGTTTTAACCTCTTCTTTAGGCATCTGGTGAGTATTGCAGATCTTCAGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp GATGTTTATAGCTGCTATTTAGGCCCAAAGAGTCAATTCTGGCCTCAGGGATCACCTCTCTGCTGTTATTaGGTGCATAATTCCACTGTT +
Preference number: 4 (lower is better)
Translates to: DVYSCYLGPKSQFWPQGSPLCCY*VHNSTV
Trigger: AACAGTGGAATTATGCACCCAATAACAGCAGAGAGG...TGATCCCTGAGGCCAGAATTGACTCTTTGGGCCTAAATAGCAGCTATAAACATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp ACACTGGGCACATGGGAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGCCAATAATGGAACACTaGGCACATGGGAGTTATTTA +
Preference number: 4 (lower is better)
Translates to: TLGTWELFISYCLRSWPRPIMEH*AHGSYL
Trigger: TAAATAACTCCCATGTGCCCAGTGTTCCATTATTGG...CCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTCCCATGTGCCCAGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp GTTATTCCTACGCAGAGGGATAGGATAAAACATGCCTCCCAGAAAGACTGGTCTAGTGCTCCTTACTGTTaGCGAATCACCAATTTCAAT +
Preference number: 4 (lower is better)
Translates to: VIPTQRDRIKHASQKDWSSAPYC*RITNFN
Trigger: ATTGAAATTGGTGATTCGCCAACAGTAAGGAGCACT...AGACCAGTCTTTCTGGGAGGCATGTTTTATCCTATCCCTCTGCGTAGGAATAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp CCTTCTATAAAAGAAGCTCAAAGCATTGTGGGTGGTCAATCCAGAGAATGCTTATCTCCATCTGAAGGCTaGACTAGGATGGAAAGTGCA +
Preference number: 4 (lower is better)
Translates to: PSIKEAQSIVGGQSRECLSPSEG*TRMESA
Trigger: TGCACTTTCCATCCTAGTCCAGCCTTCAGATGGAGA...TAAGCATTCTCTGGATTGACCACCCACAATGCTTTGAGCTTCTTTTATAGAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp AGCCTGAAGATCTGCAATACTCACCAGATGCCTAAAGAAGAGGTTAAAACATTTCCAAAGAGTCAATTCTaGCCTCAGGGATCACAGGCT +
Preference number: 4 (lower is better)
Translates to: SLKICNTHQMPKEEVKTFPKSQF*PQGSQA
Trigger: AGCCTGTGATCCCTGAGGCCAGAATTGACTCTTTGG...AAATGTTTTAACCTCTTCTTTAGGCATCTGGTGAGTATTGCAGATCTTCAGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp CCTTCTATAAAAGAAGCTCAAAGCATTGTGGGTGGTCAATCCAGAGAATGCTTAAGAGTTGGCCTACAGTaGTGCTCAAATTGGCTCATC +
Preference number: 4 (lower is better)
Translates to: PSIKEAQSIVGGQSRECLRVGLQ*CSNWLI
Trigger: GATGAGCCAATTTGAGCACCACTGTAGGCCAACTCT...TAAGCATTCTCTGGATTGACCACCCACAATGCTTTGAGCTTCTTTTATAGAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp GTTATTCCTACGCAGAGGGATAGGATAAAACATGCCTCCCAGAAAGACTGGTCTCTGGGAAATATTTGCTaGGTTACCCATGTTAACGAT +
Preference number: 4 (lower is better)
Translates to: VIPTQRDRIKHASQKDWSLGNIC*VTHVND
Trigger: ATCGTTAACATGGGTAACCCAGCAAATATTTCCCAG...AGACCAGTCTTTCTGGGAGGCATGTTTTATCCTATCCCTCTGCGTAGGAATAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp CTTCTTTCCTACTCCCCCATATCTGCTACTGGAACTTCCATTCCCAAAGATATCATATGTAAACTCAGGTaGCGTACTGCCAAAAGTAGT +
Preference number: 4 (lower is better)
Translates to: LLSYSPISATGTSIPKDIICKLR*RTAKSS
Trigger: ACTACTTTTGGCAGTACGTCACCTGAGTTTACATAT...GATATCTTTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGAGTAGGAAAGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp CCCGTACAAATGTGTGAATTTGGTGAAATTGCCTTTAACAACCTTACCAAATGTACCCATTTGTCTCCTTaGGCTTCCAAGATCACTGGG +
Preference number: 4 (lower is better)
Translates to: PVQMCEFGEIAFNNLTKCTHLSP*ASKITG
Trigger: CCCAGTGATCTTGGAAGCTCAAGGAGACAAATGGGT...ACATTTGGTAAGGTTGTTAAAGGCAATTTCACCAAATTCACACATTTGTACGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp GATGTTTATAGCTGCTATTTAGGCCCAAAGAGTCAATTCTGGCCTCAGGGATCATTTGAAAGCCGATTGTaGAGGACACAATCATCTTCA +
Preference number: 4 (lower is better)
Translates to: DVYSCYLGPKSQFWPQGSFESRL*RTQSSS
Trigger: TGAAGATGATTGTGTCCTTCACAATCGGCTTTCAAA...TGATCCCTGAGGCCAGAATTGACTCTTTGGGCCTAAATAGCAGCTATAAACATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp ACACTGGGCACATGGGAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGTGTAAATCATTAGGTTaGTGTCACCATCAATGGAGT +
Preference number: 4 (lower is better)
Translates to: TLGTWELFISYCLRSWPRCKSLG*CHHQWS
Trigger: ACTCCATTGATGGTGACATCAACCTAATGATTTACA...CCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTCCCATGTGCCCAGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp TTCAACACCACCAATTTAATATCTGAATTGCTCCTCTCTCATATAGTGGGTACCGGTAGCAAATCTGTCTaGCAGACTACATTGGTCTGG +
Preference number: 4 (lower is better)
Translates to: FNTTNLISELLLSHIVGTGSKSV*QTTLVW
Trigger: CCAGACCAATGTAGTCTGTCAGACAGATTTGCTACC...GGTACCCACTATATGAGAGAGGAGCAATTCAGATATTAAATTGGTGGTGTTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp GCCAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATAGCACTGAATTCTGCTTaGATTGCTTGTAGCGACATT +
Preference number: 4 (lower is better)
Translates to: AKIPCHMLEPGKLLKMFIALNSA*IACSDI
Trigger: AATGTCGCTACAAGCAATTCAAGCAGAATTCAGTGC...TATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp GACATGAATGAACATAGAGCTGCTCTCTTTGCTTTTGGTGTTTCCCTAATTCTCCCAATGACTCCTATGTaGTACCAAAGTCCATCTACC +
Preference number: 4 (lower is better)
Translates to: DMNEHRAALFAFGVSLILPMTPM*YQSPST
Trigger: GGTAGATGGACTTTGGTATCACATAGGAGTCATTGG...GAGAATTAGGGAAACACCAAAAGCAAAGAGAGCAGCTCTATGTTCATTCATGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp ACACTGGGCACATGGGAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGAAGATGTCATCGCTCTaGGAAATAGAGATCAATTCT +
Preference number: 4 (lower is better)
Translates to: TLGTWELFISYCLRSWPRKMSSL*EIEINS
Trigger: AGAATTGATCTCTATTTCTCAGAGCGATGACATCTT...CCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTCCCATGTGCCCAGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp GACATGAATGAACATAGAGCTGCTCTCTTTGCTTTTGGTGTTTCCCTAATTCTCGACACCCACACAGGGTaGCATTCCTATAAAAATGTC +
Preference number: 4 (lower is better)
Translates to: DMNEHRAALFAFGVSLILDTHTG*HSYKNV
Trigger: GACATTTTTATAGGAATGTCACCCTGTGTGGGTGTC...GAGAATTAGGGAAACACCAAAAGCAAAGAGAGCAGCTCTATGTTCATTCATGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp TCACTTCCCCAGCTTATTATCCAGAAATACTGGGAACATTCTGCCTTTCAGGCCAGGAGCTATTATAGATaGGAACTTCATCTCTTTCCA +
Preference number: 4 (lower is better)
Translates to: SLPQLIIQKYWEHSAFQARSYYR*ELHLFP
Trigger: TGGAAAGAGATGAAGTTCTCATCTATAATAGCTCCT...GGCCTGAAAGGCAGAATGTTCCCAGTATTTCTGGATAATAAGCTGGGGAAGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp ATGGCACACTGTTCCAATAATGGAACACTGGGCACATGGGAGTTATTTATATCCTATATTTCCATGTCCTaGCCAGTCATCTTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: MAHCSNNGTLGTWELFISYISMS*PVIFPS
Trigger: GGAAGGAAAGATGACTGGTCAGGACATGGAAATATA...GGATATAAATAACTCCCATGTGCCCAGTGTTCCATTATTGGAACAGTGTGCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp ATGCCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATTCAGTTATCCCAAGGTGGCTaGAATTTAGGGTATACAAAG +
Preference number: 4 (lower is better)
Translates to: MPCRHNSCLPVLLIELIQLSQGG*NLGYTK
Trigger: CTTTGTATACCCTAAATTTCAGCCACCTTGGGATAA...CTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp ATAGTGGGTACCCCAAACTCACTAAAGGCAAAGCTTAAGCAACCATCCTCTTCTGACCAAAGCTTGAATTaGCCAAACAAGAAGCTGAAA +
Preference number: 4 (lower is better)
Translates to: IVGTPNSLKAKLKQPSSSDQSLN*PNKKLK
Trigger: TTTCAGCTTCTTGTTTGGTCAATTCAAGCTTTGGTC...AGAAGAGGATGGTTGCTTAAGCTTTGCCTTTAGTGAGTTTGGGGTACCCACTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp GACATGAATGAACATAGAGCTGCTCTCTTTGCTTTTGGTGTTTCCCTAATTCTCAACCCGACCAAAGCTTaGATTGACCAAACAAGAAGC +
Preference number: 4 (lower is better)
Translates to: DMNEHRAALFAFGVSLILNPTKA*IDQTRS
Trigger: GCTTCTTGTTTGGTCAATTCAAGCTTTGGTCGGGTT...GAGAATTAGGGAAACACCAAAAGCAAAGAGAGCAGCTCTATGTTCATTCATGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp GCCAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATACCAATAGACATACGATaGAAAAGAACACCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: AKIPCHMLEPGKLLKMFIPIDIR*KRTPPP
Trigger: TGGAGGAGGTGTTCTTTTTCATCGTATGTCTATTGG...TATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp CCCGTACAAATGTGTGAATTTGGTGAAATTGCCTTTAACAACCTTACCAAATGTTTCTGTTGGGTAAAATaGGAACGTCATCCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: PVQMCEFGEIAFNNLTKCFCWVK*ERHPQG
Trigger: GCCCTGGGGATGACGTTCTCATTTTACCCAACAGAA...ACATTTGGTAAGGTTGTTAAAGGCAATTTCACCAAATTCACACATTTGTACGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp TCTCATATAGTGGGTACCCCAAACTCACTAAAGGCAAAGCTTAAGCAACCATCCTCACATACAGCCCTTTaGAGAATGGAAGATCTGTAT +
Preference number: 4 (lower is better)
Translates to: SHIVGTPNSLKAKLKQPSSHTAL*RMEDLY
Trigger: ATACAGATCTTCCATTCTTCAAAGGGCTGTATGTGA...GGATGGTTGCTTAAGCTTTGCCTTTAGTGAGTTTGGGGTACCCACTATATGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp GATGTTTATAGCTGCTATTTAGGCCCAAAGAGTCAATTCTGGCCTCAGGGATCATCACATACAGCCCTTTaGAGAATGGAAGATCTGTAT +
Preference number: 4 (lower is better)
Translates to: DVYSCYLGPKSQFWPQGSSHTAL*RMEDLY
Trigger: ATACAGATCTTCCATTCTTCAAAGGGCTGTATGTGA...TGATCCCTGAGGCCAGAATTGACTCTTTGGGCCTAAATAGCAGCTATAAACATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp AGCCTGAAGATCTGCAATACTCACCAGATGCCTAAAGAAGAGGTTAAAACATTTCAATATGCCGGTGTTTaGGCCGTTCATAGATCCTCA +
Preference number: 4 (lower is better)
Translates to: SLKICNTHQMPKEEVKTFQYAGV*AVHRSS
Trigger: TGAGGATCTATGAACGGCTCAAACACCGGCATATTG...AAATGTTTTAACCTCTTCTTTAGGCATCTGGTGAGTATTGCAGATCTTCAGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp ATGGCACACTGTTCCAATAATGGAACACTGGGCACATGGGAGTTATTTATATCCCATGATACGTCAGGCTaGATTTGTATATTTCGGGTC +
Preference number: 4 (lower is better)
Translates to: MAHCSNNGTLGTWELFISHDTSG*ICIFRV
Trigger: GACCCGAAATATACAAATTCAGCCTGACGTATCATG...GGATATAAATAACTCCCATGTGCCCAGTGTTCCATTATTGGAACAGTGTGCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp CCTTCTATAAAAGAAGCTCAAAGCATTGTGGGTGGTCAATCCAGAGAATGCTTAGATTTGGTTCTGAGGTaGATACAGGCCACAGAATAC +
Preference number: 4 (lower is better)
Translates to: PSIKEAQSIVGGQSRECLDLVLR*IQATEY
Trigger: GTATTCTGTGGCCTGTATTCACCTCAGAACCAAATC...TAAGCATTCTCTGGATTGACCACCCACAATGCTTTGAGCTTCTTTTATAGAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp ATGGCACACTGTTCCAATAATGGAACACTGGGCACATGGGAGTTATTTATATCCTCCCATCCAGATCCTTaGAGAGATATTTTCTTGGAC +
Preference number: 4 (lower is better)
Translates to: MAHCSNNGTLGTWELFISSHPDP*RDIFLD
Trigger: GTCCAAGAAAATATCTCTTCAAGGATCTGGATGGGA...GGATATAAATAACTCCCATGTGCCCAGTGTTCCATTATTGGAACAGTGTGCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp TTCAACACCACCAATTTAATATCTGAATTGCTCCTCTCTCATATAGTGGGTACCCAGTGGTTACTGCGTTaGAGAAGGATGCAGTCCATT +
Preference number: 4 (lower is better)
Translates to: FNTTNLISELLLSHIVGTQWLLR*RRMQSI
Trigger: AATGGACTGCATCCTTCTTCAACGCAGTAACCACTG...GGTACCCACTATATGAGAGAGGAGCAATTCAGATATTAAATTGGTGGTGTTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp TTCAACACCACCAATTTAATATCTGAATTGCTCCTCTCTCATATAGTGGGTACCGGTAAGGGAAGTATTTaGGGGTCAATAAGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: FNTTNLISELLLSHIVGTGKGSI*GSIRLW
Trigger: CCAGAGCCTTATTGACCCTCAAATACTTCCCTTACC...GGTACCCACTATATGAGAGAGGAGCAATTCAGATATTAAATTGGTGGTGTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp ATGCCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATTCAGACTGGATATAACTTCTaGATTGCCCAAATGGCATCA +
Preference number: 4 (lower is better)
Translates to: MPCRHNSCLPVLLIELIQTGYNF*IAQMAS
Trigger: TGATGCCATTTGGGCAATTCAGAAGTTATATCCAGT...CTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp AGCCTGAAGATCTGCAATACTCACCAGATGCCTAAAGAAGAGGTTAAAACATTTGTGAATGGAAACACCTaGGCGTATTTCAATGGGCTC +
Preference number: 4 (lower is better)
Translates to: SLKICNTHQMPKEEVKTFVNGNT*AYFNGL
Trigger: GAGCCCATTGAAATACGCTCAGGTGTTTCCATTCAC...AAATGTTTTAACCTCTTCTTTAGGCATCTGGTGAGTATTGCAGATCTTCAGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp GCCAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATAGCAGTGATGACTCGATaGGCCAAATTCTGTAATTTG +
Preference number: 4 (lower is better)
Translates to: AKIPCHMLEPGKLLKMFIAVMTR*AKFCNL
Trigger: CAAATTACAGAATTTGGCTCATCGAGTCATCACTGC...TATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp GATGTTTATAGCTGCTATTTAGGCCCAAAGAGTCAATTCTGGCCTCAGGGATCATTCTCGGCGTTTGGATaGGATGTGGATATGAATATT +
Preference number: 4 (lower is better)
Translates to: DVYSCYLGPKSQFWPQGSFSAFG*DVDMNI
Trigger: AATATTCATATCCACATCTCATCCAAACGCCGAGAA...TGATCCCTGAGGCCAGAATTGACTCTTTGGGCCTAAATAGCAGCTATAAACATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp CCTTCTATAAAAGAAGCTCAAAGCATTGTGGGTGGTCAATCCAGAGAATGCTTACCACTTGGCTTTCTCTaGTCTCCCAATGTAGTTCTT +
Preference number: 4 (lower is better)
Translates to: PSIKEAQSIVGGQSRECLPLGFL*SPNVVL
Trigger: AAGAACTACATTGGGAGATCAGAGAAAGCCAAGTGG...TAAGCATTCTCTGGATTGACCACCCACAATGCTTTGAGCTTCTTTTATAGAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp GCCAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATAAAGCTTACGGCTCTTTaGGGATCCAATGAGTATACT +
Preference number: 4 (lower is better)
Translates to: AKIPCHMLEPGKLLKMFIKLTAL*GSNEYT
Trigger: AGTATACTCATTGGATCCTCAAAGAGCCGTAAGCTT...TATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp GATGTTTATAGCTGCTATTTAGGCCCAAAGAGTCAATTCTGGCCTCAGGGATCAAGCTTAACTATGGGTTaGGGAATTTTAGCTAGATGC +
Preference number: 4 (lower is better)
Translates to: DVYSCYLGPKSQFWPQGSSLTMG*GILARC
Trigger: GCATCTAGCTAAAATTCCTCAACCCATAGTTAAGCT...TGATCCCTGAGGCCAGAATTGACTCTTTGGGCCTAAATAGCAGCTATAAACATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp CCTTCTATAAAAGAAGCTCAAAGCATTGTGGGTGGTCAATCCAGAGAATGCTTAACTCTGGAAGAGACTTaGAGTTCTGTTGGTCAGGTA +
Preference number: 4 (lower is better)
Translates to: PSIKEAQSIVGGQSRECLTLEET*SSVGQV
Trigger: TACCTGACCAACAGAACTTCAAGTCTCTTCCAGAGT...TAAGCATTCTCTGGATTGACCACCCACAATGCTTTGAGCTTCTTTTATAGAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp TGGGAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGTCTGATTTTGCATTGTTCACTGTAACCTaGAAGAACTGGGAGTCACCA +
Preference number: 4 (lower is better)
Translates to: WELFISYCLRSWPRSDFALFTVT*KNWESP
Trigger: TGGTGACTCCCAGTTCTTGCAGGTTACAGTGAACAA...TGCAAAATCAGACCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR GCA 90 bp GATGTTTATAGCTGCTATTTAGGCCCAAAGAGTCAATTCTGGCCTCAGGGATCAAACATCAAGATCCGATaGATTCCAACAGGTAGCAAA +
Preference number: 4 (lower is better)
Translates to: DVYSCYLGPKSQFWPQGSNIKIR*IPTGSK
Trigger: TTTGCTACCTGTTGGAATGCATCGGATCTTGATGTT...TGATCCCTGAGGCCAGAATTGACTCTTTGGGCCTAAATAGCAGCTATAAACATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp GACATGAATGAACATAGAGCTGCTCTCTTTGCTTTTGGTGTTTCCCTAATTCTCCACCGCCTGCTATATTaGTTATGTTTCTGCTCAGAG +
Preference number: 4 (lower is better)
Translates to: DMNEHRAALFAFGVSLILHRLLY*LCFCSE
Trigger: CTCTGAGCAGAAACATAAGCAATATAGCAGGCGGTG...GAGAATTAGGGAAACACCAAAAGCAAAGAGAGCAGCTCTATGTTCATTCATGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp CAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATAGCTTTGTGATTTCTCCTTaGATGGCAGTGACTACTGGT +
Preference number: 4 (lower is better)
Translates to: QNSMPHARAWQVTEDVYSFVISP*MAVTTG
Trigger: ACCAGTAGTCACTGCCATGCAAGGAGAAATCACAAA...GCTATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp AGCCTGAAGATCTGCAATACTCACCAGATGCCTAAAGAAGAGGTTAAAACATTTTTACTTCCTCCCACATaGAGGCTCAGGCTGCTATTT +
Preference number: 4 (lower is better)
Translates to: SLKICNTHQMPKEEVKTFLLPPT*RLRLLF
Trigger: AAATAGCAGCCTGAGCCTGCATGTGGGAGGAAGTAA...AAATGTTTTAACCTCTTCTTTAGGCATCTGGTGAGTATTGCAGATCTTCAGGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp CCCGTACAAATGTGTGAATTTGGTGAAATTGCCTTTAACAACCTTACCAAATGTCTTGGAGAGGATAGATaGCAGCCTCCAGACTGTGAA +
Preference number: 4 (lower is better)
Translates to: PVQMCEFGEIAFNNLTKCLGEDR*QPPDCE
Trigger: TTCACAGTCTGGAGGCTGGCATCTATCCTCTCCAAG...ACATTTGGTAAGGTTGTTAAAGGCAATTTCACCAAATTCACACATTTGTACGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp GAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGTCTGATTTTGCAATTTATCCGAGGCATCACTaGAAATTGCTGGAGCACCAC +
Preference number: 4 (lower is better)
Translates to: ELFISYCLRSWPRSDFAIYPRHH*KLLEHH
Trigger: GTGGTGCTCCAGCAATTTGCAGTGATGCCTCGGATA...AATTGCAAAATCAGACCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR GCA 90 bp AGCCTGAAGATCTGCAATACTCACCAGATGCCTAAAGAAGAGGTTAAAACATTTACTGTAAAGAAAAGTTaGCCTGAGTGTTCTGGCCCC +
Preference number: 4 (lower is better)
Translates to: SLKICNTHQMPKEEVKTFTVKKS*PECSGP
Trigger: GGGGCCAGAACACTCAGGGCAACTTTTCTTTACAGT...AAATGTTTTAACCTCTTCTTTAGGCATCTGGTGAGTATTGCAGATCTTCAGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp GACATGAATGAACATAGAGCTGCTCTCTTTGCTTTTGGTGTTTCCCTAATTCTCTCTGGTAGTGAACCGTaGAGAGAAAGAGTTCCATTC +
Preference number: 4 (lower is better)
Translates to: DMNEHRAALFAFGVSLILSGSEP*RERVPF
Trigger: GAATGGAACTCTTTCTCTGCACGGTTCACTACCAGA...GAGAATTAGGGAAACACCAAAAGCAAAGAGAGCAGCTCTATGTTCATTCATGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp CTTCTTTCCTACTCCCCCATATCTGCTACTGGAACTTCCATTCCCAAAGATATCTTTCCTTCCATGAATTaGCTCCCAGGAGATATATCT +
Preference number: 4 (lower is better)
Translates to: LLSYSPISATGTSIPKDIFPSMN*LPGDIS
Trigger: AGATATATCTCCTGGGAGGCAATTCATGGAAGGAAA...GATATCTTTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGAGTAGGAAAGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR GCA 90 bp TCTCATATAGTGGGTACCCCAAACTCACTAAAGGCAAAGCTTAAGCAACCATCCGACTGCAGATATAGATaGCAGATGGTGTCAACATTT +
Preference number: 4 (lower is better)
Translates to: SHIVGTPNSLKAKLKQPSDCRYR*QMVSTF
Trigger: AAATGTTGACACCATCTGGCATCTATATCTGCAGTC...GGATGGTTGCTTAAGCTTTGCCTTTAGTGAGTTTGGGGTACCCACTATATGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR GCA 90 bp CCTTCTATAAAAGAAGCTCAAAGCATTGTGGGTGGTCAATCCAGAGAATGCTTATGCCATGGCCAGCTGTaGCAAACACAATATTGTCAT +
Preference number: 4 (lower is better)
Translates to: PSIKEAQSIVGGQSRECLCHGQL*QTQYCH
Trigger: ATGACAATATTGTGTTTGGCACAGCTGGCCATGGCA...TAAGCATTCTCTGGATTGACCACCCACAATGCTTTGAGCTTCTTTTATAGAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp CAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATAGCTCACTTTGTCCTGAATaGAGTCAAAAGAAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: QNSMPHARAWQVTEDVYSSLCPE*SQKKSW
Trigger: CCAGCTCTTCTTTTGACTGCATTCAGGACAAAGTGA...GCTATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp TCACTTCCCCAGCTTATTATCCAGAAATACTGGGAACATTCTGCCTTTCAGGCCACAGTAAAAATAAAGTaGCAGTTTGACCCAGAGATC +
Preference number: 4 (lower is better)
Translates to: SLPQLIIQKYWEHSAFQATVKIK*QFDPEI
Trigger: GATCTCTGGGTCAAACTGGCACTTTATTTTTACTGT...GGCCTGAAAGGCAGAATGTTCCCAGTATTTCTGGATAATAAGCTGGGGAAGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp AGCCTGAAGATCTGCAATACTCACCAGATGCCTAAAGAAGAGGTTAAAACATTTATACTGGGAACATTCTaGCTTTCAGGCCAAATGCCC +
Preference number: 4 (lower is better)
Translates to: SLKICNTHQMPKEEVKTFILGTF*LSGQMP
Trigger: GGGCATTTGGCCTGAAAGGCAGAATGTTCCCAGTAT...AAATGTTTTAACCTCTTCTTTAGGCATCTGGTGAGTATTGCAGATCTTCAGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp GATGTTTATAGCTGCTATTTAGGCCCAAAGAGTCAATTCTGGCCTCAGGGATCAGATCTTTTCTTTACATaGTTGGAGCATAAGGCCTTC +
Preference number: 4 (lower is better)
Translates to: DVYSCYLGPKSQFWPQGSDLFFT*LEHKAF
Trigger: GAAGGCCTTATGCTCCAAGCATGTAAAGAAAAGATC...TGATCCCTGAGGCCAGAATTGACTCTTTGGGCCTAAATAGCAGCTATAAACATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp TCACTTCCCCAGCTTATTATCCAGAAATACTGGGAACATTCTGCCTTTCAGGCCGCAATACTCACCAGATaGCTAAAGAAGAGGTTAAAA +
Preference number: 4 (lower is better)
Translates to: SLPQLIIQKYWEHSAFQAAILTR*LKKRLK
Trigger: TTTTAACCTCTTCTTTAGGCATCTGGTGAGTATTGC...GGCCTGAAAGGCAGAATGTTCCCAGTATTTCTGGATAATAAGCTGGGGAAGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp TTCAACACCACCAATTTAATATCTGAATTGCTCCTCTCTCATATAGTGGGTACCAGTACAGCTATCTCGTaGTCCTGGATTTGGACTGCT +
Preference number: 4 (lower is better)
Translates to: FNTTNLISELLLSHIVGTSTAIS*SWIWTA
Trigger: AGCAGTCCAAATCCAGGACCACGAGATAGCTGTACT...GGTACCCACTATATGAGAGAGGAGCAATTCAGATATTAAATTGGTGGTGTTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp GAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGTCTGATTTTGCAATTAAGGCATCCTGGACGTaGACTTCCACATCCAAATCC +
Preference number: 4 (lower is better)
Translates to: ELFISYCLRSWPRSDFAIKASWT*TSTSKS
Trigger: GGATTTGGATGTGGAAGTCCACGTCCAGGATGCCTT...AATTGCAAAATCAGACCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp CCCGTACAAATGTGTGAATTTGGTGAAATTGCCTTTAACAACCTTACCAAATGTGTGAGGTACTGGATGTaGAGATCAACCCCTTGTGAG +
Preference number: 4 (lower is better)
Translates to: PVQMCEFGEIAFNNLTKCVRYWM*RSTPCE
Trigger: CTCACAAGGGGTTGATCTCCACATCCAGTACCTCAC...ACATTTGGTAAGGTTGTTAAAGGCAATTTCACCAAATTCACACATTTGTACGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp TTCAACACCACCAATTTAATATCTGAATTGCTCCTCTCTCATATAGTGGGTACCACTTCTGTGAGGTACTaGATGTGGAGATCAACCCCT +
Preference number: 4 (lower is better)
Translates to: FNTTNLISELLLSHIVGTTSVRY*MWRSTP
Trigger: AGGGGTTGATCTCCACATCCAGTACCTCACAGAAGT...GGTACCCACTATATGAGAGAGGAGCAATTCAGATATTAAATTGGTGGTGTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp GAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGTCTGATTTTGCAATTCATGGCAGTGACTACTaGTGTTGCTGCCGCTTCATA +
Preference number: 4 (lower is better)
Translates to: ELFISYCLRSWPRSDFAIHGSDY*CCCRFI
Trigger: TATGAAGCGGCAGCAACACCAGTAGTCACTGCCATG...AATTGCAAAATCAGACCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp TGGGAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGTCTGATTTTGCATCGGCACCAGAAACCTaGATGATCACGTTGTTTCTT +
Preference number: 4 (lower is better)
Translates to: WELFISYCLRSWPRSDFASAPET*MITLFL
Trigger: AAGAAACAACGTGATCATCCAGGTTTCTGGTGCCGA...TGCAAAATCAGACCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp CATTCTGGCTGCCATCAATCTCCTCCCAGTCCTCAATCAATTTCTTCTCAATTTCAGCCCTTTGAAGAATaGAAGATCTGTATCCACAAG +
Preference number: 4 (lower is better)
Translates to: HSGCHQSPPSPQSISSQFQPFEE*KICIHK
Trigger: CTTGTGGATACAGATCTTCCATTCTTCAAAGGGCTG...AAATTGAGAAGAAATTGATTGAGGACTGGGAGGAGATTGATGGCAGCCAGAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp ATAGTGGGTACCCCAAACTCACTAAAGGCAAAGCTTAAGCAACCATCCTCTTCTTTATCTTTAGCATCCTaGTCCTCTCTGCTGTTATTG +
Preference number: 4 (lower is better)
Translates to: IVGTPNSLKAKLKQPSSSLSLAS*SSLLLL
Trigger: CAATAACAGCAGAGAGGACCAGGATGCTAAAGATAA...AGAAGAGGATGGTTGCTTAAGCTTTGCCTTTAGTGAGTTTGGGGTACCCACTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp CCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATTCAGGGCTTCCTAAATCTTTCCTaGGTTGTAATGAAGGAAAGT +
Preference number: 4 (lower is better)
Translates to: PCRHNSCLPVLLIELIQGFLNLS*VVMKES
Trigger: ACTTTCCTTCATTACAACCCAGGAAAGATTTAGGAA...GCCCTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp ATGGCACACTGTTCCAATAATGGAACACTGGGCACATGGGAGTTATTTATATCCTACTGCTTAAGGTCATaGCCAAGGTCTGATTTTGCA +
Preference number: 4 (lower is better)
Translates to: MAHCSNNGTLGTWELFISYCLRS*PRSDFA
Trigger: TGCAAAATCAGACCTTGGCCATGACCTTAAGCAGTA...GGATATAAATAACTCCCATGTGCCCAGTGTTCCATTATTGGAACAGTGTGCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp ATAGTGGGTACCCCAAACTCACTAAAGGCAAAGCTTAAGCAACCATCCTCTTCTATCAGTGCACAAGAATaGCACACTGTTCCAATAATG +
Preference number: 4 (lower is better)
Translates to: IVGTPNSLKAKLKQPSSSISAQE*HTVPIM
Trigger: CATTATTGGAACAGTGTGCCATTCTTGTGCACTGAT...AGAAGAGGATGGTTGCTTAAGCTTTGCCTTTAGTGAGTTTGGGGTACCCACTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp GCCAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATAAGAATTAGGACCACTTaGTCAGTCTGTTTGCAGATG +
Preference number: 4 (lower is better)
Translates to: AKIPCHMLEPGKLLKMFIRIRTT*SVCLQM
Trigger: CATCTGCAAACAGACTGACCAAGTGGTCCTAATTCT...TATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp CCCGTACAAATGTGTGAATTTGGTGAAATTGCCTTTAACAACCTTACCAAATGTTCCTCTCGGACAATGTaGCGGCTAACTTTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: PVQMCEFGEIAFNNLTKCSSRTM*RLTFLL
Trigger: CAGAAGGAAAGTTAGCCGCCACATTGTCCGAGAGGA...ACATTTGGTAAGGTTGTTAAAGGCAATTTCACCAAATTCACACATTTGTACGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp CCCGTACAAATGTGTGAATTTGGTGAAATTGCCTTTAACAACCTTACCAAATGTTTTTGGCCTGCCAGCTaGTATCTGAGCAACTGCTCT +
Preference number: 4 (lower is better)
Translates to: PVQMCEFGEIAFNNLTKCFWPAS*YLSNCS
Trigger: AGAGCAGTTGCTCAGATACCAGCTGGCAGGCCAAAA...ACATTTGGTAAGGTTGTTAAAGGCAATTTCACCAAATTCACACATTTGTACGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp GACATGAATGAACATAGAGCTGCTCTCTTTGCTTTTGGTGTTTCCCTAATTCTCAAGTTGCCTTGTGGTTaGAAGGTAAGCTCTGACAGA +
Preference number: 4 (lower is better)
Translates to: DMNEHRAALFAFGVSLILKLPCG*KVSSDR
Trigger: TCTGTCAGAGCTTACCTTCCAACCACAAGGCAACTT...GAGAATTAGGGAAACACCAAAAGCAAAGAGAGCAGCTCTATGTTCATTCATGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp GCCAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATACAGTTTGAAAAGAAATaGGCCCCGTACAAATGTGTG +
Preference number: 4 (lower is better)
Translates to: AKIPCHMLEPGKLLKMFIQFEKK*APYKCV
Trigger: CACACATTTGTACGGGGCCCATTTCTTTTCAAACTG...TATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp ATGCCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATTCAGTATAGGATAACCTACTaGATATTCTCACTAGGCAGC +
Preference number: 4 (lower is better)
Translates to: MPCRHNSCLPVLLIELIQYRITY*IFSLGS
Trigger: GCTGCCTAGTGAGAATATCCAGTAGGTTATCCTATA...CTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp TCACTTCCCCAGCTTATTATCCAGAAATACTGGGAACATTCTGCCTTTCAGGCCGATCACAGGCTTTTCTaGGATGGAATTAGTAAGATA +
Preference number: 4 (lower is better)
Translates to: SLPQLIIQKYWEHSAFQADHRLF*DGISKI
Trigger: TATCTTACTAATTCCATCCCAGAAAAGCCTGTGATC...GGCCTGAAAGGCAGAATGTTCCCAGTATTTCTGGATAATAAGCTGGGGAAGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp CCTTCTATAAAAGAAGCTCAAAGCATTGTGGGTGGTCAATCCAGAGAATGCTTACAGTGGTGCTCAAATTaGCTCATCTCCAGACATGAA +
Preference number: 4 (lower is better)
Translates to: PSIKEAQSIVGGQSRECLQWCSN*LISRHE
Trigger: TTCATGTCTGGAGATGAGCCAATTTGAGCACCACTG...TAAGCATTCTCTGGATTGACCACCCACAATGCTTTGAGCTTCTTTTATAGAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp GATGTTTATAGCTGCTATTTAGGCCCAAAGAGTCAATTCTGGCCTCAGGGATCAACAGAAAATCAGCAATaGGAGGCAAGAAGAGATTCT +
Preference number: 4 (lower is better)
Translates to: DVYSCYLGPKSQFWPQGSTENQQ*EARRDS
Trigger: AGAATCTCTTCTTGCCTCCCATTGCTGATTTTCTGT...TGATCCCTGAGGCCAGAATTGACTCTTTGGGCCTAAATAGCAGCTATAAACATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
3UTR CAA 72 bp CAGCTTTATGCATCATCTTCTCCAAAAAGCAGCTTTTaGATAAAGGACTTGGCCACTTGGCTTTCTCTGATC +
Preference number: 4 (lower is better)
Translates to: QLYASSSPKSSF*IKDLATWLSLI
Trigger: GATCAGAGAAAGCCAAGTGGCCAAGTCCTTTATCAAAAAGCTGCTTTTTGGAGAAGATGATGCATAAAGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp CTTCTTTCCTACTCCCCCATATCTGCTACTGGAACTTCCATTCCCAAAGATATCTCCTTTGTTAAATACTaGGAAGCTAACATTCTGGGA +
Preference number: 4 (lower is better)
Translates to: LLSYSPISATGTSIPKDISFVKY*EANILG
Trigger: TCCCAGAATGTTAGCTTCTCAGTATTTAACAAAGGA...GATATCTTTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGAGTAGGAAAGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp CCCGTACAAATGTGTGAATTTGGTGAAATTGCCTTTAACAACCTTACCAAATGTAGTCCTTGGTTCCTCTaGCCAACTGAAATGCAAGGA +
Preference number: 4 (lower is better)
Translates to: PVQMCEFGEIAFNNLTKCSPWFL*PTEMQG
Trigger: TCCTTGCATTTCAGTTGGTCAGAGGAACCAAGGACT...ACATTTGGTAAGGTTGTTAAAGGCAATTTCACCAAATTCACACATTTGTACGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp GATGTTTATAGCTGCTATTTAGGCCCAAAGAGTCAATTCTGGCCTCAGGGATCATGTAAATCATTAGGTTaGTGTCACCATCAATGGAGT +
Preference number: 4 (lower is better)
Translates to: DVYSCYLGPKSQFWPQGSCKSLG*CHHQWS
Trigger: ACTCCATTGATGGTGACATCAACCTAATGATTTACA...TGATCCCTGAGGCCAGAATTGACTCTTTGGGCCTAAATAGCAGCTATAAACATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp CCTTCTATAAAAGAAGCTCAAAGCATTGTGGGTGGTCAATCCAGAGAATGCTTAGGTGGAACTTTGCACTaGATTCTGCTTGAATTGCTT +
Preference number: 4 (lower is better)
Translates to: PSIKEAQSIVGGQSRECLGGTLH*ILLELL
Trigger: AAGCAATTCAAGCAGAATTCAGTGCAAAGTTCCACC...TAAGCATTCTCTGGATTGACCACCCACAATGCTTTGAGCTTCTTTTATAGAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp CAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATAGCACATTGCAAGGAAGTTaGTCATCCACAAATACCATC +
Preference number: 4 (lower is better)
Translates to: QNSMPHARAWQVTEDVYSTLQGS*SSTNTI
Trigger: GATGGTATTTGTGGATGATCAACTTCCTTGCAATGT...GCTATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp GAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGTCTGATTTTGCAATTCTGGTCAATATAGACTaGCGTGGTGTTCTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: ELFISYCLRSWPRSDFAILVNID*RGVLSS
Trigger: AGAGGACAGAACACCACGTCAGTCTATATTGACCAG...AATTGCAAAATCAGACCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp TTCAACACCACCAATTTAATATCTGAATTGCTCCTCTCTCATATAGTGGGTACCCCAATGACTCCTATGTaGTACCAAAGTCCATCTACC +
Preference number: 4 (lower is better)
Translates to: FNTTNLISELLLSHIVGTPMTPM*YQSPST
Trigger: GGTAGATGGACTTTGGTATCACATAGGAGTCATTGG...GGTACCCACTATATGAGAGAGGAGCAATTCAGATATTAAATTGGTGGTGTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp TCTCATATAGTGGGTACCCCAAACTCACTAAAGGCAAAGCTTAAGCAACCATCCAGGAGCTATTATAGATaGGAACTTCATCTCTTTCCA +
Preference number: 4 (lower is better)
Translates to: SHIVGTPNSLKAKLKQPSRSYYR*ELHLFP
Trigger: TGGAAAGAGATGAAGTTCTCATCTATAATAGCTCCT...GGATGGTTGCTTAAGCTTTGCCTTTAGTGAGTTTGGGGTACCCACTATATGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp CATTCTGGCTGCCATCAATCTCCTCCCAGTCCTCAATCAATTTCTTCTCAATTTCACCAGAAACCTGGATaGTCACGTTGTTTCTTATTA +
Preference number: 4 (lower is better)
Translates to: HSGCHQSPPSPQSISSQFHQKPG*SRCFLL
Trigger: TAATAAGAAACAACGTGATCATCCAGGTTTCTGGTG...AAATTGAGAAGAAATTGATTGAGGACTGGGAGGAGATTGATGGCAGCCAGAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp CAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATAGCAGTTTTAATCCCAGATaGCATACACAGACTTCCCTT +
Preference number: 4 (lower is better)
Translates to: QNSMPHARAWQVTEDVYSSFNPR*HTQTSL
Trigger: AAGGGAAGTCTGTGTATGTCATCTGGGATTAAAACT...GCTATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp CAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATAGCGACCAAAGCTTGAATTaGCCAAACAAGAAGCTGAAA +
Preference number: 4 (lower is better)
Translates to: QNSMPHARAWQVTEDVYSDQSLN*PNKKLK
Trigger: TTTCAGCTTCTTGTTTGGTCAATTCAAGCTTTGGTC...GCTATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp AGCCTGAAGATCTGCAATACTCACCAGATGCCTAAAGAAGAGGTTAAAACATTTGTTCTCAGATTGCAATaGGTAGGTCTCTTGGTCCAA +
Preference number: 4 (lower is better)
Translates to: SLKICNTHQMPKEEVKTFVLRLQ*VGLLVQ
Trigger: TTGGACCAAGAGACCTACTCATTGCAATCTGAGAAC...AAATGTTTTAACCTCTTCTTTAGGCATCTGGTGAGTATTGCAGATCTTCAGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp CCCGTACAAATGTGTGAATTTGGTGAAATTGCCTTTAACAACCTTACCAAATGTTCACAGCCTTGGTTCTaGCCTGGTGATGGAAGAAAT +
Preference number: 4 (lower is better)
Translates to: PVQMCEFGEIAFNNLTKCSQPWF*PGDGRN
Trigger: ATTTCTTCCATCACCAGGTCAGAACCAAGGCTGTGA...ACATTTGGTAAGGTTGTTAAAGGCAATTTCACCAAATTCACACATTTGTACGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp GACATGAATGAACATAGAGCTGCTCTCTTTGCTTTTGGTGTTTCCCTAATTCTCGTTCCTGGGTCAATATaGATTCCATTCATACGGTCA +
Preference number: 4 (lower is better)
Translates to: DMNEHRAALFAFGVSLILVPGSI*IPFIRS
Trigger: TGACCGTATGAATGGAATTCATATTGACCCAGGAAC...GAGAATTAGGGAAACACCAAAAGCAAAGAGAGCAGCTCTATGTTCATTCATGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp GACATGAATGAACATAGAGCTGCTCTCTTTGCTTTTGGTGTTTCCCTAATTCTCCATGATACGTCAGGCTaGATTTGTATATTTCGGGTC +
Preference number: 4 (lower is better)
Translates to: DMNEHRAALFAFGVSLILHDTSG*ICIFRV
Trigger: GACCCGAAATATACAAATTCAGCCTGACGTATCATG...GAGAATTAGGGAAACACCAAAAGCAAAGAGAGCAGCTCTATGTTCATTCATGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp TTCAACACCACCAATTTAATATCTGAATTGCTCCTCTCTCATATAGTGGGTACCAAGTTGAAGGACACCTaGAAATTCTTCTCGGCTGGA +
Preference number: 4 (lower is better)
Translates to: FNTTNLISELLLSHIVGTKLKDT*KFFSAG
Trigger: TCCAGCCGAGAAGAATTTTCAGGTGTCCTTCAACTT...GGTACCCACTATATGAGAGAGGAGCAATTCAGATATTAAATTGGTGGTGTTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp CCCGTACAAATGTGTGAATTTGGTGAAATTGCCTTTAACAACCTTACCAAATGTATAGAAAGTAGACACTaGCCCAGAAGTAGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: PVQMCEFGEIAFNNLTKCIESRH*PRSRAG
Trigger: CCCTGCTCTACTTCTGGGTCAGTGTCTACTTTCTAT...ACATTTGGTAAGGTTGTTAAAGGCAATTTCACCAAATTCACACATTTGTACGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp AGCCTGAAGATCTGCAATACTCACCAGATGCCTAAAGAAGAGGTTAAAACATTTTCACCTTGCCCAGCATaGCCTTCATTCTCATATCTT +
Preference number: 4 (lower is better)
Translates to: SLKICNTHQMPKEEVKTFSPCPA*PSFSYL
Trigger: AAGATATGAGAATGAAGGTCATGCTGGGCAAGGTGA...AAATGTTTTAACCTCTTCTTTAGGCATCTGGTGAGTATTGCAGATCTTCAGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp ATGCCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATTCAGTCTCAGCAAAGCCCATaGGAATATCAATTTTCATGT +
Preference number: 4 (lower is better)
Translates to: MPCRHNSCLPVLLIELIQSQQSP*EYQFSC
Trigger: ACATGAAAATTGATATTCTCATGGGCTTTGCTGAGA...CTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp CAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATAGCAAGTATTCTTCAGTTTaGAAAGAAATGGGCCCCGTA +
Preference number: 4 (lower is better)
Translates to: QNSMPHARAWQVTEDVYSKYSSV*KEMGPV
Trigger: TACGGGGCCCATTTCTTTTCAAACTGAAGAATACTT...GCTATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp GCCAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATACCCATGTTAACGATCTaGATAAATTTAGAGTTGGCC +
Preference number: 4 (lower is better)
Translates to: AKIPCHMLEPGKLLKMFIPMLTI*INLELA
Trigger: GGCCAACTCTAAATTTATTCAGATCGTTAACATGGG...TATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp GAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGTCTGATTTTGCAATTGTACAGACCCTCATGTaGTTCAGACAGCACAGATCT +
Preference number: 4 (lower is better)
Translates to: ELFISYCLRSWPRSDFAIVQTLM*FRQHRS
Trigger: AGATCTGTGCTGTCTGAAGCACATGAGGGTCTGTAC...AATTGCAAAATCAGACCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR GCA 90 bp CTTCTTTCCTACTCCCCCATATCTGCTACTGGAACTTCCATTCCCAAAGATATCAAAGGGGTTCCAGTTTaGATTTTACTGCAAGTAACT +
Preference number: 4 (lower is better)
Translates to: LLSYSPISATGTSIPKDIKGVPV*ILLQVT
Trigger: AGTTACTTGCAGTAAAATGCAAACTGGAACCCCTTT...GATATCTTTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGAGTAGGAAAGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR GCA 90 bp CCCGTACAAATGTGTGAATTTGGTGAAATTGCCTTTAACAACCTTACCAAATGTTGCTCTGGGAAGAACTaGAGAATAGTCCCCTCTGAT +
Preference number: 4 (lower is better)
Translates to: PVQMCEFGEIAFNNLTKCCSGKN*RIVPSD
Trigger: ATCAGAGGGGACTATTCTGCAGTTCTTCCCAGAGCA...ACATTTGGTAAGGTTGTTAAAGGCAATTTCACCAAATTCACACATTTGTACGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp TGGGAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGTCTGATTTTGCATTTGTGATTTCTCCTTaGATGGCAGTGACTACTGGT +
Preference number: 4 (lower is better)
Translates to: WELFISYCLRSWPRSDFAFVISP*MAVTTG
Trigger: ACCAGTAGTCACTGCCATGCAAGGAGAAATCACAAA...TGCAAAATCAGACCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR GCA 90 bp GCCAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATAGACTGCAGATATAGATaGCAGATGGTGTCAACATTT +
Preference number: 4 (lower is better)
Translates to: AKIPCHMLEPGKLLKMFIDCRYR*QMVSTF
Trigger: AAATGTTGACACCATCTGGCATCTATATCTGCAGTC...TATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp GATGTTTATAGCTGCTATTTAGGCCCAAAGAGTCAATTCTGGCCTCAGGGATCACAAGTCTTCCAAAATTaGTGCATGAGGAAATGGAAA +
Preference number: 4 (lower is better)
Translates to: DVYSCYLGPKSQFWPQGSQVFQN*CMRKWK
Trigger: TTTCCATTTCCTCATGCAGCAATTTTGGAAGACTTG...TGATCCCTGAGGCCAGAATTGACTCTTTGGGCCTAAATAGCAGCTATAAACATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp TTCAACACCACCAATTTAATATCTGAATTGCTCCTCTCTCATATAGTGGGTACCGGGGCGCCAATCCACTaGATCTTCTACTATAATTCT +
Preference number: 4 (lower is better)
Translates to: FNTTNLISELLLSHIVGTGAPIH*IFYYNS
Trigger: AGAATTATAGTAGAAGATGCAGTGGATTGGCGCCCC...GGTACCCACTATATGAGAGAGGAGCAATTCAGATATTAAATTGGTGGTGTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR GCA 90 bp CCCGTACAAATGTGTGAATTTGGTGAAATTGCCTTTAACAACCTTACCAAATGTTGCGTTGAAGAAGGATaGAGTCCATTCTGCCTCTGT +
Preference number: 4 (lower is better)
Translates to: PVQMCEFGEIAFNNLTKCCVEEG*SPFCLC
Trigger: ACAGAGGCAGAATGGACTGCATCCTTCTTCAACGCA...ACATTTGGTAAGGTTGTTAAAGGCAATTTCACCAAATTCACACATTTGTACGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp GAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGTCTGATTTTGCAATTCAAAGTTCAGCTTCCTaGAGGCTCCTCCTCTATTCT +
Preference number: 4 (lower is better)
Translates to: ELFISYCLRSWPRSDFAIQSSAS*RLLLYS
Trigger: AGAATAGAGGAGGAGCCTGCAGGAAGCTGAACTTTG...AATTGCAAAATCAGACCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR GCA 90 bp GATGTTTATAGCTGCTATTTAGGCCCAAAGAGTCAATTCTGGCCTCAGGGATCAGAAGATGTTTATAGCTaGTATTTAGGCCCAAAGAGT +
Preference number: 4 (lower is better)
Translates to: DVYSCYLGPKSQFWPQGSEDVYS*YLGPKS
Trigger: ACTCTTTGGGCCTAAATAGCAGCTATAAACATCTTC...TGATCCCTGAGGCCAGAATTGACTCTTTGGGCCTAAATAGCAGCTATAAACATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp CCCGTACAAATGTGTGAATTTGGTGAAATTGCCTTTAACAACCTTACCAAATGTAGTACAGCTATCTCGTaGTCCTGGATTTGGACTGCT +
Preference number: 4 (lower is better)
Translates to: PVQMCEFGEIAFNNLTKCSTAIS*SWIWTA
Trigger: AGCAGTCCAAATCCAGGACCACGAGATAGCTGTACT...ACATTTGGTAAGGTTGTTAAAGGCAATTTCACCAAATTCACACATTTGTACGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp CTTCTTTCCTACTCCCCCATATCTGCTACTGGAACTTCCATTCCCAAAGATATCATTTCTGAGTGTGTCTaGTATAGGAAAAGATCCTGT +
Preference number: 4 (lower is better)
Translates to: LLSYSPISATGTSIPKDIISECV*YRKRSC
Trigger: ACAGGATCTTTTCCTATACCAGACACACTCAGAAAT...GATATCTTTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGAGTAGGAAAGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp GAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGTCTGATTTTGCAATTGTAACCTGCAAGAACTaGGAGTCACCAGAGAAACCA +
Preference number: 4 (lower is better)
Translates to: ELFISYCLRSWPRSDFAIVTCKN*ESPEKP
Trigger: TGGTTTCTCTGGTGACTCCCAGTTCTTGCAGGTTAC...AATTGCAAAATCAGACCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp CAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATAGCATCACTGCAAATTGCTaGAGCACCACAGACATATTA +
Preference number: 4 (lower is better)
Translates to: QNSMPHARAWQVTEDVYSITANC*STTDIL
Trigger: TAATATGTCTGTGGTGCTCCAGCAATTTGCAGTGAT...GCTATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp AGCCTGAAGATCTGCAATACTCACCAGATGCCTAAAGAAGAGGTTAAAACATTTTGGCAGAGAATGGTGTaGTCTCCCAAACTCAAAATC +
Preference number: 4 (lower is better)
Translates to: SLKICNTHQMPKEEVKTFWQRMV*SPKLKI
Trigger: GATTTTGAGTTTGGGAGACCACACCATTCTCTGCCA...AAATGTTTTAACCTCTTCTTTAGGCATCTGGTGAGTATTGCAGATCTTCAGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp GCCAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATAGACATTATCCCAAGGTaGCTGAAATTTAGGGTATAC +
Preference number: 4 (lower is better)
Translates to: AKIPCHMLEPGKLLKMFIDIIPR*LKFRVY
Trigger: GTATACCCTAAATTTCAGCCACCTTGGGATAATGTC...TATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp TTGAGGGTCAATAAGGCTCTGGGGGAACCAATTCCTCAAATCACACTGTATCTGTTTGTAAACTTCAACTaGCTGGTCTTCACAGTAAAT +
Preference number: 4 (lower is better)
Translates to: LRVNKALGEPIPQITLYLFVNFN*LVFTVN
Trigger: ATTTACTGTGAAGACCAGCCAGTTGAAGTTTACAAA...CAGATACAGTGTGATTTGAGGAATTGGTTCCCCCAGAGCCTTATTGACCCTCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp ATAGTGGGTACCCCAAACTCACTAAAGGCAAAGCTTAAGCAACCATCCTCTTCTTCTCTACATGTAACATaGCACCATAGTCAAAGTTCT +
Preference number: 4 (lower is better)
Translates to: IVGTPNSLKAKLKQPSSSSLHVT*HHSQSS
Trigger: AGAACTTTGACTATGGTGCCATGTTACATGTAGAGA...AGAAGAGGATGGTTGCTTAAGCTTTGCCTTTAGTGAGTTTGGGGTACCCACTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp ATGGCACACTGTTCCAATAATGGAACACTGGGCACATGGGAGTTATTTATATCCAACCTCCAGCATAAATaGGTTATCTTTACCACACCA +
Preference number: 4 (lower is better)
Translates to: MAHCSNNGTLGTWELFISNLQHK*VIFTTP
Trigger: TGGTGTGGTAAAGATAACCCATTTATGCTGGAGGTT...GGATATAAATAACTCCCATGTGCCCAGTGTTCCATTATTGGAACAGTGTGCCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp GAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGTCTGATTTTGCAATTGGGTCAATAAGGCTCTaGGGGAACCAATTCCTCAAA +
Preference number: 4 (lower is better)
Translates to: ELFISYCLRSWPRSDFAIGSIRL*GNQFLK
Trigger: TTTGAGGAATTGGTTCCCCCAGAGCCTTATTGACCC...AATTGCAAAATCAGACCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp GATGTTTATAGCTGCTATTTAGGCCCAAAGAGTCAATTCTGGCCTCAGGGATCATGTAAAATTGACTCCTaGAGGAGAAGTGACAGTAAA +
Preference number: 4 (lower is better)
Translates to: DVYSCYLGPKSQFWPQGSCKIDS*RRSDSK
Trigger: TTTACTGTCACTTCTCCTCCAGGAGTCAATTTTACA...TGATCCCTGAGGCCAGAATTGACTCTTTGGGCCTAAATAGCAGCTATAAACATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp AGCCTGAAGATCTGCAATACTCACCAGATGCCTAAAGAAGAGGTTAAAACATTTAGGCAAGACAGCAAATaGCTTGGATCGAGCTGTAAA +
Preference number: 4 (lower is better)
Translates to: SLKICNTHQMPKEEVKTFRQDSK*LGSSCK
Trigger: TTTACAGCTCGATCCAAGCCATTTGCTGTCTTGCCT...AAATGTTTTAACCTCTTCTTTAGGCATCTGGTGAGTATTGCAGATCTTCAGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp ATGCCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATTCAGATTATCCAGAAATACTaGGAACATTCTGCCTTTCAG +
Preference number: 4 (lower is better)
Translates to: MPCRHNSCLPVLLIELIQIIQKY*EHSAFQ
Trigger: CTGAAAGGCAGAATGTTCCCAGTATTTCTGGATAAT...CTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp CAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATAGCAGGCAGCTAAATGCATaGTATAGAGCTCAGGAAAAA +
Preference number: 4 (lower is better)
Translates to: QNSMPHARAWQVTEDVYSRQLNA*YRAQEK
Trigger: TTTTTCCTGAGCTCTATACCATGCATTTAGCTGCCT...GCTATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp ATGCCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATTCAGTGGTCAAAACAACCGTaGCTCCATATATACTTCTTT +
Preference number: 4 (lower is better)
Translates to: MPCRHNSCLPVLLIELIQWSKQP*LHIYFF
Trigger: AAAGAAGTATATATGGAGCCACGGTTGTTTTGACCA...CTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp TGGGAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGTCTGATTTTGCATTTGAAAGCCGATTGTaGAGGACACAATCATCTTCA +
Preference number: 4 (lower is better)
Translates to: WELFISYCLRSWPRSDFAFESRL*RTQSSS
Trigger: TGAAGATGATTGTGTCCTTCACAATCGGCTTTCAAA...TGCAAAATCAGACCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp GAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGTCTGATTTTGCAATTCAGAATAGTCCCCTCTaGTCACAGTCACATTCACAA +
Preference number: 4 (lower is better)
Translates to: ELFISYCLRSWPRSDFAIQNSPL*SQSHSQ
Trigger: TTGTGAATGTGACTGTGATCAGAGGGGACTATTCTG...AATTGCAAAATCAGACCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp GAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGTCTGATTTTGCAATTTTGCCTCTTCCCTTATaGAAAGAGTGCAATTCCCCT +
Preference number: 4 (lower is better)
Translates to: ELFISYCLRSWPRSDFAILPLPL*KECNSP
Trigger: AGGGGAATTGCACTCTTTTCATAAGGGAAGAGGCAA...AATTGCAAAATCAGACCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp CAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATAGCAAGATGTCATCGCTCTaGGAAATAGAGATCAATTCT +
Preference number: 4 (lower is better)
Translates to: QNSMPHARAWQVTEDVYSKMSSL*EIEINS
Trigger: AGAATTGATCTCTATTTCTCAGAGCGATGACATCTT...GCTATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp CATTCTGGCTGCCATCAATCTCCTCCCAGTCCTCAATCAATTTCTTCTCAATTTAGAATATCTCAAAGGTaGCTTAAGATAGAGGTCTGT +
Preference number: 4 (lower is better)
Translates to: HSGCHQSPPSPQSISSQFRISQR*LKIEVC
Trigger: ACAGACCTCTATCTTAAGTCACCTTTGAGATATTCT...AAATTGAGAAGAAATTGATTGAGGACTGGGAGGAGATTGATGGCAGCCAGAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp GCCAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATAAGAATATCTCAAAGGTaGCTTAAGATAGAGGTCTGT +
Preference number: 4 (lower is better)
Translates to: AKIPCHMLEPGKLLKMFIRISQR*LKIEVC
Trigger: ACAGACCTCTATCTTAAGTCACCTTTGAGATATTCT...TATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp CATTCTGGCTGCCATCAATCTCCTCCCAGTCCTCAATCAATTTCTTCTCAATTTTTCTCTGTAAAGTTGTaGGAATATCTCAAAGGTGAC +
Preference number: 4 (lower is better)
Translates to: HSGCHQSPPSPQSISSQFFSVKL*EYLKGD
Trigger: GTCACCTTTGAGATATTCTCACAACTTTACAGAGAA...AAATTGAGAAGAAATTGATTGAGGACTGGGAGGAGATTGATGGCAGCCAGAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp CATTCTGGCTGCCATCAATCTCCTCCCAGTCCTCAATCAATTTCTTCTCAATTTATTCCTGAAATTGAATaGTCATTCCTCACTTTGTGC +
Preference number: 4 (lower is better)
Translates to: HSGCHQSPPSPQSISSQFIPEIE*SFLTLC
Trigger: GCACAAAGTGAGGAATGATCATTCAATTTCAGGAAT...AAATTGAGAAGAAATTGATTGAGGACTGGGAGGAGATTGATGGCAGCCAGAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp AGCCTGAAGATCTGCAATACTCACCAGATGCCTAAAGAAGAGGTTAAAACATTTTCCCATCCAGATCCTTaGAGAGATATTTTCTTGGAC +
Preference number: 4 (lower is better)
Translates to: SLKICNTHQMPKEEVKTFSHPDP*RDIFLD
Trigger: GTCCAAGAAAATATCTCTTCAAGGATCTGGATGGGA...AAATGTTTTAACCTCTTCTTTAGGCATCTGGTGAGTATTGCAGATCTTCAGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp TGGGAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGTCTGATTTTGCAAGAGACATATGTAAATaGTCTGGGAAGAACTGCAGA +
Preference number: 4 (lower is better)
Translates to: WELFISYCLRSWPRSDFARDICK*SGKNCR
Trigger: TCTGCAGTTCTTCCCAGAGCATTTACATATGTCTCT...TGCAAAATCAGACCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR GCA 90 bp CCCGTACAAATGTGTGAATTTGGTGAAATTGCCTTTAACAACCTTACCAAATGTTGTACACTTCCAATATaGCGGTGTTTGAGCCGTTCA +
Preference number: 4 (lower is better)
Translates to: PVQMCEFGEIAFNNLTKCCTLPI*RCLSRS
Trigger: TGAACGGCTCAAACACCGGCATATTGGAAGTGTACA...ACATTTGGTAAGGTTGTTAAAGGCAATTTCACCAAATTCACACATTTGTACGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp TGGGAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGTCTGATTTTGCATCTGCTGTTATTGGGTaGATAATTCCACTGTTCTCT +
Preference number: 4 (lower is better)
Translates to: WELFISYCLRSWPRSDFASAVIG*IIPLFS
Trigger: AGAGAACAGTGGAATTATGCACCCAATAACAGCAGA...TGCAAAATCAGACCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR GCA 90 bp GACATGAATGAACATAGAGCTGCTCTCTTTGCTTTTGGTGTTTCCCTAATTCTCATGAAATCATTCCAGTaGTCCTTACTGTTGGCGAAT +
Preference number: 4 (lower is better)
Translates to: DMNEHRAALFAFGVSLILMKSFQ*SLLLAN
Trigger: ATTCGCCAACAGTAAGGAGCACTGGAATGATTTCAT...GAGAATTAGGGAAACACCAAAAGCAAAGAGAGCAGCTCTATGTTCATTCATGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp CAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATAGCATTTCTGAGTGTGTCTaGTATAGGAAAAGATCCTGT +
Preference number: 4 (lower is better)
Translates to: QNSMPHARAWQVTEDVYSISECV*YRKRSC
Trigger: ACAGGATCTTTTCCTATACCAGACACACTCAGAAAT...GCTATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp TGGGAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGTCTGATTTTGCAGTGTCTAATATCACATaGAATGCCTGCAATGGTAAC +
Preference number: 4 (lower is better)
Translates to: WELFISYCLRSWPRSDFAVSNIT*NACNGN
Trigger: GTTACCATTGCAGGCATTCCATGTGATATTAGACAC...TGCAAAATCAGACCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp GACATGAATGAACATAGAGCTGCTCTCTTTGCTTTTGGTGTTTCCCTAATTCTCCAAGTAACTCCTCAATaGTTGTTTGAATCAGATGGG +
Preference number: 4 (lower is better)
Translates to: DMNEHRAALFAFGVSLILQVTPQ*LFESDG
Trigger: CCCATCTGATTCAAACAACCATTGAGGAGTTACTTG...GAGAATTAGGGAAACACCAAAAGCAAAGAGAGCAGCTCTATGTTCATTCATGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp CCCGTACAAATGTGTGAATTTGGTGAAATTGCCTTTAACAACCTTACCAAATGTAGAGTTGGAAACTTCTaGGCCTCGTTCAAATCCAAG +
Preference number: 4 (lower is better)
Translates to: PVQMCEFGEIAFNNLTKCRVGNF*ASFKSK
Trigger: CTTGGATTTGAACGAGGCCCAGAAGTTTCCAACTCT...ACATTTGGTAAGGTTGTTAAAGGCAATTTCACCAAATTCACACATTTGTACGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp GACATGAATGAACATAGAGCTGCTCTCTTTGCTTTTGGTGTTTCCCTAATTCTCACATGTCTCCAAATATaGGTCCAAGAAAAACTCCAC +
Preference number: 4 (lower is better)
Translates to: DMNEHRAALFAFGVSLILTCLQI*VQEKLH
Trigger: GTGGAGTTTTTCTTGGACCCATATTTGGAGACATGT...GAGAATTAGGGAAACACCAAAAGCAAAGAGAGCAGCTCTATGTTCATTCATGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp CATTCTGGCTGCCATCAATCTCCTCCCAGTCCTCAATCAATTTCTTCTCAATTTGATATAGATGCCAGATaGTGTCAACATTTCAGGATT +
Preference number: 4 (lower is better)
Translates to: HSGCHQSPPSPQSISSQFDIDAR*CQHFRI
Trigger: AATCCTGAAATGTTGACACCATCTGGCATCTATATC...AAATTGAGAAGAAATTGATTGAGGACTGGGAGGAGATTGATGGCAGCCAGAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp CCTTCTATAAAAGAAGCTCAAAGCATTGTGGGTGGTCAATCCAGAGAATGCTTACAAAGAGACCATACCTaGTACAAGAATGTGCAATGT +
Preference number: 4 (lower is better)
Translates to: PSIKEAQSIVGGQSRECLQRDHT*YKNVQC
Trigger: ACATTGCACATTCTTGTACCAGGTATGGTCTCTTTG...TAAGCATTCTCTGGATTGACCACCCACAATGCTTTGAGCTTCTTTTATAGAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp CCCGTACAAATGTGTGAATTTGGTGAAATTGCCTTTAACAACCTTACCAAATGTCTACTTCTAAAAATCTaGGCACCACCTGCACTTTCC +
Preference number: 4 (lower is better)
Translates to: PVQMCEFGEIAFNNLTKCLLLKI*APPALS
Trigger: GGAAAGTGCAGGTGGTGCCCAGATTTTTAGAAGTAG...ACATTTGGTAAGGTTGTTAAAGGCAATTTCACCAAATTCACACATTTGTACGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp AGCCTGAAGATCTGCAATACTCACCAGATGCCTAAAGAAGAGGTTAAAACATTTCAGCCCTTTGAAGAATaGAAGATCTGTATCCACAAG +
Preference number: 4 (lower is better)
Translates to: SLKICNTHQMPKEEVKTFQPFEE*KICIHK
Trigger: CTTGTGGATACAGATCTTCCATTCTTCAAAGGGCTG...AAATGTTTTAACCTCTTCTTTAGGCATCTGGTGAGTATTGCAGATCTTCAGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp CCCGTACAAATGTGTGAATTTGGTGAAATTGCCTTTAACAACCTTACCAAATGTTTGATGTCCTTTACCTaGTTCACTTTGATTCCCGCC +
Preference number: 4 (lower is better)
Translates to: PVQMCEFGEIAFNNLTKCLMSFT*FTLIPA
Trigger: GGCGGGAATCAAAGTGAACCAGGTAAAGGACATCAA...ACATTTGGTAAGGTTGTTAAAGGCAATTTCACCAAATTCACACATTTGTACGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp ATGCCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATTCAGTTTGACGGAATTTTGTaGAGCAGAAAATACATACAC +
Preference number: 4 (lower is better)
Translates to: MPCRHNSCLPVLLIELIQFDGIL*SRKYIH
Trigger: GTGTATGTATTTTCTGCTCCACAAAATTCCGTCAAA...CTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp TTCAACACCACCAATTTAATATCTGAATTGCTCCTCTCTCATATAGTGGGTACCCCTCTCTGCTGTTATTaGGTGCATAATTCCACTGTT +
Preference number: 4 (lower is better)
Translates to: FNTTNLISELLLSHIVGTPLCCY*VHNSTV
Trigger: AACAGTGGAATTATGCACCCAATAACAGCAGAGAGG...GGTACCCACTATATGAGAGAGGAGCAATTCAGATATTAAATTGGTGGTGTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp TCTCATATAGTGGGTACCCCAAACTCACTAAAGGCAAAGCTTAAGCAACCATCCTTCCTAAATCTTTCCTaGGTTGTAATGAAGGAAAGT +
Preference number: 4 (lower is better)
Translates to: SHIVGTPNSLKAKLKQPSFLNLS*VVMKES
Trigger: ACTTTCCTTCATTACAACCCAGGAAAGATTTAGGAA...GGATGGTTGCTTAAGCTTTGCCTTTAGTGAGTTTGGGGTACCCACTATATGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp AGCCTGAAGATCTGCAATACTCACCAGATGCCTAAAGAAGAGGTTAAAACATTTCTCTACTGTCAGCAATaGCCTTTAAGGTCTCTTCAT +
Preference number: 4 (lower is better)
Translates to: SLKICNTHQMPKEEVKTFLYCQQ*PLRSLH
Trigger: ATGAAGAGACCTTAAAGGCCATTGCTGACAGTAGAG...AAATGTTTTAACCTCTTCTTTAGGCATCTGGTGAGTATTGCAGATCTTCAGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp GACATGAATGAACATAGAGCTGCTCTCTTTGCTTTTGGTGTTTCCCTAATTCTCTTTTCTTTACATGCTTaGAGCATAAGGCCTTCTGGA +
Preference number: 4 (lower is better)
Translates to: DMNEHRAALFAFGVSLILFSLHA*SIRPSG
Trigger: TCCAGAAGGCCTTATGCTCCAAGCATGTAAAGAAAA...GAGAATTAGGGAAACACCAAAAGCAAAGAGAGCAGCTCTATGTTCATTCATGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp CCCGTACAAATGTGTGAATTTGGTGAAATTGCCTTTAACAACCTTACCAAATGTAATTCTCTCATTTCCTaGGGCAATATCAGCTCCAAG +
Preference number: 4 (lower is better)
Translates to: PVQMCEFGEIAFNNLTKCNSLIS*GNISSK
Trigger: CTTGGAGCTGATATTGCCTCAGGAAATGAGAGAATT...ACATTTGGTAAGGTTGTTAAAGGCAATTTCACCAAATTCACACATTTGTACGGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp GACATGAATGAACATAGAGCTGCTCTCTTTGCTTTTGGTGTTTCCCTAATTCTCATTCCTGAAATTGAATaGTCATTCCTCACTTTGTGC +
Preference number: 4 (lower is better)
Translates to: DMNEHRAALFAFGVSLILIPEIE*SFLTLC
Trigger: GCACAAAGTGAGGAATGATCATTCAATTTCAGGAAT...GAGAATTAGGGAAACACCAAAAGCAAAGAGAGCAGCTCTATGTTCATTCATGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp GAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGTCTGATTTTGCAATTTCTGACCAACTGAAATaGAAGGAAGCTTGGCTATCT +
Preference number: 4 (lower is better)
Translates to: ELFISYCLRSWPRSDFAISDQLK*KEAWLS
Trigger: AGATAGCCAAGCTTCCTTGCATTTCAGTTGGTCAGA...AATTGCAAAATCAGACCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR GCA 90 bp CCTTCTATAAAAGAAGCTCAAAGCATTGTGGGTGGTCAATCCAGAGAATGCTTAAAAGGGGTTCCAGTTTaGATTTTACTGCAAGTAACT +
Preference number: 4 (lower is better)
Translates to: PSIKEAQSIVGGQSRECLKGVPV*ILLQVT
Trigger: AGTTACTTGCAGTAAAATGCAAACTGGAACCCCTTT...TAAGCATTCTCTGGATTGACCACCCACAATGCTTTGAGCTTCTTTTATAGAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp TTCAACACCACCAATTTAATATCTGAATTGCTCCTCTCTCATATAGTGGGTACCAACATCAAGATCCGATaGATTCCAACAGGTAGCAAA +
Preference number: 4 (lower is better)
Translates to: FNTTNLISELLLSHIVGTNIKIR*IPTGSK
Trigger: TTTGCTACCTGTTGGAATGCATCGGATCTTGATGTT...GGTACCCACTATATGAGAGAGGAGCAATTCAGATATTAAATTGGTGGTGTTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR GCA 90 bp GAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGTCTGATTTTGCAATTGAATACAAACAGTGCTaGAGATTACCTTCTGGAGCA +
Preference number: 4 (lower is better)
Translates to: ELFISYCLRSWPRSDFAIEYKQC*RLPSGA
Trigger: TGCTCCAGAAGGTAATCTGCAGCACTGTTTGTATTC...AATTGCAAAATCAGACCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR GCA 90 bp TGGGAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGTCTGATTTTGCACAAGTCTTCCAAAATTaGTGCATGAGGAAATGGAAA +
Preference number: 4 (lower is better)
Translates to: WELFISYCLRSWPRSDFAQVFQN*CMRKWK
Trigger: TTTCCATTTCCTCATGCAGCAATTTTGGAAGACTTG...TGCAAAATCAGACCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTCCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR GCA 90 bp CAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATAGCTTGCAGATGAATCCTTaGATCAGAAATTGGTATGTA +
Preference number: 4 (lower is better)
Translates to: QNSMPHARAWQVTEDVYSLQMNP*IRNWYV
Trigger: TACATACCAATTTCTGATGCAAGGATTCATCTGCAA...GCTATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp CCTTCTATAAAAGAAGCTCAAAGCATTGTGGGTGGTCAATCCAGAGAATGCTTAGGAATTTTAGCTAGATaGCAAAATTCCATGCCACAT +
Preference number: 4 (lower is better)
Translates to: PSIKEAQSIVGGQSRECLGILAR*QNSMPH
Trigger: ATGTGGCATGGAATTTTGGCATCTAGCTAAAATTCC...TAAGCATTCTCTGGATTGACCACCCACAATGCTTTGAGCTTCTTTTATAGAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp CCCGTACAAATGTGTGAATTTGGTGAAATTGCCTTTAACAACCTTACCAAATGTGGAGCTTGTGATGTTTaGTTGGTCATGAGATGGAAA +
Preference number: 4 (lower is better)
Translates to: PVQMCEFGEIAFNNLTKCGACDV*LVMRWK
Trigger: TTTCCATCTCATGACCAACCAAACATCACAAGCTCC...ACATTTGGTAAGGTTGTTAAAGGCAATTTCACCAAATTCACACATTTGTACGGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp CAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATAGCTTTGTAAACTTCAACTaGCTGGTCTTCACAGTAAAT +
Preference number: 4 (lower is better)
Translates to: QNSMPHARAWQVTEDVYSFVNFN*LVFTVN
Trigger: ATTTACTGTGAAGACCAGCCAGTTGAAGTTTACAAA...GCTATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp GACATGAATGAACATAGAGCTGCTCTCTTTGCTTTTGGTGTTTCCCTAATTCTCAACCCCAATTGTTCCTaGGTCAATATGAATTCCATT +
Preference number: 4 (lower is better)
Translates to: DMNEHRAALFAFGVSLILNPNCS*VNMNSI
Trigger: AATGGAATTCATATTGACCCAGGAACAATTGGGGTT...GAGAATTAGGGAAACACCAAAAGCAAAGAGAGCAGCTCTATGTTCATTCATGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp CCTTCTATAAAAGAAGCTCAAAGCATTGTGGGTGGTCAATCCAGAGAATGCTTAAGTAAGACTGATAGATaGAAGGGAGTCATTCAACTA +
Preference number: 4 (lower is better)
Translates to: PSIKEAQSIVGGQSRECLSKTDR*KGVIQL
Trigger: TAGTTGAATGACTCCCTTCCATCTATCAGTCTTACT...TAAGCATTCTCTGGATTGACCACCCACAATGCTTTGAGCTTCTTTTATAGAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
3UTR CAA 72 bp TCCAAAGATTTCAACACCACCAATTTAATATCTGAATaGCTCCTCTCTCATATAGTGGGTACCCCAAACTCA +
Preference number: 4 (lower is better)
Translates to: SKDFNTTNLISE*LLSHIVGTPNS
Trigger: TGAGTTTGGGGTACCCACTATATGAGAGAGGAGCAATTCAGATATTAAATTGGTGGTGTTGAAATCTTTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp GAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGTCTGATTTTGCAATTCTGCTGACACATTACTaGATTCAACAGATGAGTACA +
Preference number: 4 (lower is better)
Translates to: ELFISYCLRSWPRSDFAILLTHY*IQQMST
Trigger: TGTACTCATCTGTTGAATTCAGTAATGTGTCAGCAG...AATTGCAAAATCAGACCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR TCA 90 bp CCCGTACAAATGTGTGAATTTGGTGAAATTGCCTTTAACAACCTTACCAAATGTCAGTCTGTTTGCAGATaGATCCTTGCATCAGAAATT +
Preference number: 4 (lower is better)
Translates to: PVQMCEFGEIAFNNLTKCQSVCR*ILASEI
Trigger: AATTTCTGATGCAAGGATTCATCTGCAAACAGACTG...ACATTTGGTAAGGTTGTTAAAGGCAATTTCACCAAATTCACACATTTGTACGGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp AGCCTGAAGATCTGCAATACTCACCAGATGCCTAAAGAAGAGGTTAAAACATTTATGTGTAAATCCTCATaGAGTGCAAATTTGATACGC +
Preference number: 4 (lower is better)
Translates to: SLKICNTHQMPKEEVKTFMCKSS*SANLIR
Trigger: GCGTATCAAATTTGCACTTCATGAGGATTTACACAT...AAATGTTTTAACCTCTTCTTTAGGCATCTGGTGAGTATTGCAGATCTTCAGGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp CCCGTACAAATGTGTGAATTTGGTGAAATTGCCTTTAACAACCTTACCAAATGTAGAGACATATGTAAATaGTCTGGGAAGAACTGCAGA +
Preference number: 4 (lower is better)
Translates to: PVQMCEFGEIAFNNLTKCRDICK*SGKNCR
Trigger: TCTGCAGTTCTTCCCAGAGCATTTACATATGTCTCT...ACATTTGGTAAGGTTGTTAAAGGCAATTTCACCAAATTCACACATTTGTACGGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp CCCGTACAAATGTGTGAATTTGGTGAAATTGCCTTTAACAACCTTACCAAATGTTTTCCTTCCATGAATTaGCTCCCAGGAGATATATCT +
Preference number: 4 (lower is better)
Translates to: PVQMCEFGEIAFNNLTKCFPSMN*LPGDIS
Trigger: AGATATATCTCCTGGGAGGCAATTCATGGAAGGAAA...ACATTTGGTAAGGTTGTTAAAGGCAATTTCACCAAATTCACACATTTGTACGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp CCCGTACAAATGTGTGAATTTGGTGAAATTGCCTTTAACAACCTTACCAAATGTTCTGCTGTTATTGGGTaGATAATTCCACTGTTCTCT +
Preference number: 4 (lower is better)
Translates to: PVQMCEFGEIAFNNLTKCSAVIG*IIPLFS
Trigger: AGAGAACAGTGGAATTATGCACCCAATAACAGCAGA...ACATTTGGTAAGGTTGTTAAAGGCAATTTCACCAAATTCACACATTTGTACGGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp CCCGTACAAATGTGTGAATTTGGTGAAATTGCCTTTAACAACCTTACCAAATGTTTCTCTAAATGTACCTaGGTTGAAGAAGGATGCAGT +
Preference number: 4 (lower is better)
Translates to: PVQMCEFGEIAFNNLTKCFSKCT*VEEGCS
Trigger: ACTGCATCCTTCTTCAACGCAGGTACATTTAGAGAA...ACATTTGGTAAGGTTGTTAAAGGCAATTTCACCAAATTCACACATTTGTACGGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp CCTTCTATAAAAGAAGCTCAAAGCATTGTGGGTGGTCAATCCAGAGAATGCTTAAGTATCACAGCTTTATaGATCATCTTCTCCAAAAAG +
Preference number: 4 (lower is better)
Translates to: PSIKEAQSIVGGQSRECLSITAL*IIFSKK
Trigger: CTTTTTGGAGAAGATGATGCATAAAGCTGTGATACT...TAAGCATTCTCTGGATTGACCACCCACAATGCTTTGAGCTTCTTTTATAGAAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp CCCGTACAAATGTGTGAATTTGGTGAAATTGCCTTTAACAACCTTACCAAATGTGTGTCTAATATCACATaGAATGCCTGCAATGGTAAC +
Preference number: 4 (lower is better)
Translates to: PVQMCEFGEIAFNNLTKCVSNIT*NACNGN
Trigger: GTTACCATTGCAGGCATTCCATGTGATATTAGACAC...ACATTTGGTAAGGTTGTTAAAGGCAATTTCACCAAATTCACACATTTGTACGGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp GAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGTCTGATTTTGCAATTGTAATTATTTGTCTCTaGAGCCACAAAGAACCCACT +
Preference number: 4 (lower is better)
Translates to: ELFISYCLRSWPRSDFAIVIICL*SHKEPT
Trigger: AGTGGGTTCTTTGTGGCTCCAGAGACAAATAATTAC...AATTGCAAAATCAGACCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp CCCGTACAAATGTGTGAATTTGGTGAAATTGCCTTTAACAACCTTACCAAATGTGACTCCAGTCACAGGTaGTATTCTTTACCATGTTTT +
Preference number: 4 (lower is better)
Translates to: PVQMCEFGEIAFNNLTKCDSSHR*YSLPCF
Trigger: AAAACATGGTAAAGAATACCACCTGTGACTGGAGTC...ACATTTGGTAAGGTTGTTAAAGGCAATTTCACCAAATTCACACATTTGTACGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp GAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGTCTGATTTTGCAATTACATGTCTCCAAATATaGGTCCAAGAAAAACTCCAC +
Preference number: 4 (lower is better)
Translates to: ELFISYCLRSWPRSDFAITCLQI*VQEKLH
Trigger: GTGGAGTTTTTCTTGGACCCATATTTGGAGACATGT...AATTGCAAAATCAGACCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp CCCGTACAAATGTGTGAATTTGGTGAAATTGCCTTTAACAACCTTACCAAATGTTTATCTTTAGCATCCTaGTCCTCTCTGCTGTTATTG +
Preference number: 4 (lower is better)
Translates to: PVQMCEFGEIAFNNLTKCLSLAS*SSLLLL
Trigger: CAATAACAGCAGAGAGGACCAGGATGCTAAAGATAA...ACATTTGGTAAGGTTGTTAAAGGCAATTTCACCAAATTCACACATTTGTACGGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
3UTR CAA 72 bp GCACATCTCAATATTTATTTAGATAAAGGGTGTAGATaGTCACTGCTGGGAAATATTTGCTGGGTTACCCAT +
Preference number: 4 (lower is better)
Translates to: AHLNIYLDKGCR*SLLGNICWVTH
Trigger: ATGGGTAACCCAGCAAATATTTCCCAGCAGTGACAATCTACACCCTTTATCTAAATAAATATTGAGATGTGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR TCA 90 bp CCCGTACAAATGTGTGAATTTGGTGAAATTGCCTTTAACAACCTTACCAAATGTCTTCTTGTGGACCATTaGCTTTCCTTTGTTAAATAC +
Preference number: 4 (lower is better)
Translates to: PVQMCEFGEIAFNNLTKCLLVDH*LSFVKY
Trigger: GTATTTAACAAAGGAAAGTCAATGGTCCACAAGAAG...ACATTTGGTAAGGTTGTTAAAGGCAATTTCACCAAATTCACACATTTGTACGGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR GCA 90 bp AGCCTGAAGATCTGCAATACTCACCAGATGCCTAAAGAAGAGGTTAAAACATTTTATAAACCAACTTCTTaGAAATCATTCCCTGAACAC +
Preference number: 4 (lower is better)
Translates to: SLKICNTHQMPKEEVKTFYKPTS*KSFPEH
Trigger: GTGTTCAGGGAATGATTTGCAAGAAGTTGGTTTATA...AAATGTTTTAACCTCTTCTTTAGGCATCTGGTGAGTATTGCAGATCTTCAGGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp GAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGTCTGATTTTGCAATTAACCCCAATTGTTCCTaGGTCAATATGAATTCCATT +
Preference number: 4 (lower is better)
Translates to: ELFISYCLRSWPRSDFAINPNCS*VNMNSI
Trigger: AATGGAATTCATATTGACCCAGGAACAATTGGGGTT...AATTGCAAAATCAGACCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp TTCAACACCACCAATTTAATATCTGAATTGCTCCTCTCTCATATAGTGGGTACCTTTGACGGAATTTTGTaGAGCAGAAAATACATACAC +
Preference number: 4 (lower is better)
Translates to: FNTTNLISELLLSHIVGTFDGIL*SRKYIH
Trigger: GTGTATGTATTTTCTGCTCCACAAAATTCCGTCAAA...GGTACCCACTATATGAGAGAGGAGCAATTCAGATATTAAATTGGTGGTGTTGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CCA 90 bp AGCCTGAAGATCTGCAATACTCACCAGATGCCTAAAGAAGAGGTTAAAACATTTCCTTGCATCAGAAATTaGTATGTACATTTCTGTTCT +
Preference number: 4 (lower is better)
Translates to: SLKICNTHQMPKEEVKTFPCIRN*YVHFCS
Trigger: AGAACAGAAATGTACATACCAATTTCTGATGCAAGG...AAATGTTTTAACCTCTTCTTTAGGCATCTGGTGAGTATTGCAGATCTTCAGGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp AGCCTGAAGATCTGCAATACTCACCAGATGCCTAAAGAAGAGGTTAAAACATTTAACCTGATTTGGTTTTaGCCAATCTGTAAGAAGTTA +
Preference number: 4 (lower is better)
Translates to: SLKICNTHQMPKEEVKTFNLIWF*PICKKL
Trigger: TAACTTCTTACAGATTGGCCAAAACCAAATCAGGTT...AAATGTTTTAACCTCTTCTTTAGGCATCTGGTGAGTATTGCAGATCTTCAGGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CCA 90 bp CCCGTACAAATGTGTGAATTTGGTGAAATTGCCTTTAACAACCTTACCAAATGTAATAATAACCCCTGCTaGTATAAGTCAGTATTACAC +
Preference number: 4 (lower is better)
Translates to: PVQMCEFGEIAFNNLTKCNNNPC*YKSVLH
Trigger: GTGTAATACTGACTTATACCAGCAGGGGTTATTATT...ACATTTGGTAAGGTTGTTAAAGGCAATTTCACCAAATTCACACATTTGTACGGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
3UTR CAA 72 bp TTTGAAAAGAAATGGGCCCCGTACAAATGTGTGAATTaGGTGAAATTGCCTTTAACAACCTTACCAAATGTA +
Preference number: 4 (lower is better)
Translates to: FEKKWAPYKCVN*VKLPLTTLPNV
Trigger: TACATTTGGTAAGGTTGTTAAAGGCAATTTCACCAAATTCACACATTTGTACGGGGCCCATTTCTTTTCAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS GCA 90 bp CTTTCCCCACCAAGCTTGGTGAAGGACCACGGGCGAAGAACCTGTTaGCAGCCCAGACCTCCACGGCAGCTGGAACAGTGGGAGCGCCCG +
Preference number: 5 (lower is better)
Translates to: LSPPSLVKDHGRRTC*QPRPPRQLEQWERP
Trigger: CGGGCGCTCCCACTGTTCCAGCTGCCGTGGAGGTCTGGGCTGGCAACAGGTTCTTCGCCCGTGGTCCTTCACCAAGCTTGGTGGGGAAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CCA 90 bp ACCTCCACGGCAGCTGGAACAGTGGGAGCGCCCGCATCGGGTATCTaGGGGGCTGGCAGGGTTTCACACCAGATGCTCGCCTCCGTTAAG +
Preference number: 5 (lower is better)
Translates to: TSTAAGTVGAPASGI*GAGRVSHQMLASVK
Trigger: CTTAACGGAGGCGAGCATCTGGTGTGAAACCCTGCCAGCCCCCCAGATACCCGATGCGGGCGCTCCCACTGTTCCAGCTGCCGTGGAGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS TCA 90 bp GGCAGTGGGGGCAGTGCCACCTCCAGGCCCCAAGCCGACTGTGTGTaGACCGGAGCCAAGGCATCCTGGACGTGGACTTCCACATCCAAA +
Preference number: 5 (lower is better)
Translates to: GSGGSATSRPQADCV*TGAKASWTWTSTSK
Trigger: TTTGGATGTGGAAGTCCACGTCCAGGATGCCTTGGCTCCGGTTCACACACAGTCGGCTTGGGGCCTGGAGGTGGCACTGCCCCCACTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CCA 90 bp CGTCTCCTGGGCCAGAGGGAGAAGGTTGATCTGATGAACCAGCACTaGGGAGTTTGCCGGAGGGGGCTGGAGATCCCCGAAGCAACGCAC +
Preference number: 5 (lower is better)
Translates to: RLLGQREKVDLMNQH*GVCRRGLEIPEATH
Trigger: GTGCGTTGCTTCGGGGATCTCCAGCCCCCTCCGGCAAACTCCCCAGTGCTGGTTCATCAGATCAACCTTCTCCCTCTGGCCCAGGAGACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS TCA 90 bp CCAGGAGGTGACACTGTAGACCGGAGGGGATCCCACCACAGAGACTaGTTCCACCAGATTGCCCCCTGGGCGAGCCGTTCCAGAATCAGC +
Preference number: 5 (lower is better)
Translates to: PGGDTVDRRGSHHRD*FHQIAPWASRSRIS
Trigger: GCTGATTCTGGAACGGCTCGCCCAGGGGGCAATCTGGTGGAATCAGTCTCTGTGGTGGGATCCCCTCCGGTCTACAGTGTCACCTCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS GCA 90 bp GATAGAGACGGAAATTCTGTGGAGACCAGCTGGCAGTGGGGGCAGTaGCACCTCCAGGCCCCAAGCCGACTGTGTGTGAACCGGAGCCAA +
Preference number: 5 (lower is better)
Translates to: DRDGNSVETSWQWGQ*HLQAPSRLCVNRSQ
Trigger: TTGGCTCCGGTTCACACACAGTCGGCTTGGGGCCTGGAGGTGGCACTGCCCCCACTGCCAGCTGGTCTCCACAGAATTTCCGTCTCTATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS TCA 90 bp CCTCTGACGTGGTACTCCCCGGCCGGAAGGGAAGGGACCACGCACTaGAGAACGGTGTGGTTACCAGAGACACCCACACAGGGTGACATT +
Preference number: 5 (lower is better)
Translates to: PLTWYSPAGREGTTH*RTVWLPETPTQGDI
Trigger: AATGTCACCCTGTGTGGGTGTCTCTGGTAACCACACCGTTCTTCAGTGCGTGGTCCCTTCCCTTCCGGCCGGGGAGTACCACGTCAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS GCA 90 bp CAGTGGCCCCGCAGGAGGCTTTCTTCTCTTGGGAAAGCCCCAAGCTaGCACTTTGCTTACTCAGCCGACTTTGCCCTGGCAACTGCTGCC +
Preference number: 5 (lower is better)
Translates to: QWPRRRLSSLGKAPS*HFAYSADFALATAA
Trigger: GGCAGCAGTTGCCAGGGCAAAGTCGGCTGAGTAAGCAAAGTGGCAGCTTGGGGCTTTCCCAAGAGAAGAAAGCCTCCTGCGGGGCCACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS CCA 90 bp CCCTCGATTGCCTGGCTGAGGGGTGGTGAGCCTCACATCTTTTCCTaGAGCCCGAGTGGTGCACTCAATCTTCCTGGGAGACACGTGTCT +
Preference number: 5 (lower is better)
Translates to: PSIAWLRGGEPHIFS*SPSGALNLPGRHVS
Trigger: AGACACGTGTCTCCCAGGAAGATTGAGTGCACCACTCGGGCTCCAGGAAAAGATGTGAGGCTCACCACCCCTCAGCCAGGCAATCGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS TCA 90 bp CACAAGTACCCAAACCAAAGCTGGGTCCCTGCTGAAGCCTATTCCTaGGATGCTGAGGATGGTCCCTCCCAGCAGGGACCCACAGCAAGG +
Preference number: 5 (lower is better)
Translates to: HKYPNQSWVPAEAYS*DAEDGPSQQGPTAR
Trigger: CCTTGCTGTGGGTCCCTGCTGGGAGGGACCATCCTCAGCATCTCAGGAATAGGCTTCAGCAGGGACCCAGCTTTGGTTTGGGTACTTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS TCA 90 bp TGCCGCTTCATACATGAAGGTGAAGCCTTTCCCCACCAAGCTTGGTaGAGGACCACGGGCGAAGAACCTGTTGCCAGCCCAGACCTCCAC +
Preference number: 5 (lower is better)
Translates to: CRFIHEGEAFPHQAW*RTTGEEPVASPDLH
Trigger: GTGGAGGTCTGGGCTGGCAACAGGTTCTTCGCCCGTGGTCCTTCACCAAGCTTGGTGGGGAAAGGCTTCACCTTCATGTATGAAGCGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS TCA 90 bp TCTTGGCCCTCCTTCCAGTTCCCAGTCTCTTGCAGGTACACCTGCTaGGCAGGAGCACCTGGAGCACAGATGTGCCCATGGGATGTGATG +
Preference number: 5 (lower is better)
Translates to: SWPSFQFPVSCRYTC*AGAPGAQMCPWDVM
Trigger: CATCACATCCCATGGGCACATCTGTGCTCCAGGTGCTCCTGCTCAGCAGGTGTACCTGCAAGAGACTGGGAACTGGAAGGAGGGCCAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS CCA 90 bp CCCTGCTTGGGGCTATCCCATGATGCTCTGCTTCCAGGTAGTACATaGCTCCACCCAACAGCTCCAACTTGGGAGTCTTCTGCTGCCAGG +
Preference number: 5 (lower is better)
Translates to: PCLGLSHDALLPGST*LHPTAPTWESSAAR
Trigger: CCTGGCAGCAGAAGACTCCCAAGTTGGAGCTGTTGGGTGGAGCCATGTACTACCTGGAAGCAGAGCATCATGGGATAGCCCCAAGCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CCA 90 bp CCAGTTCCCAGTCTCTTGCAGGTACACCTGCTGAGCAGGAGCACCTaGAGCACAGATGTGCCCATGGGATGTGATGCCAGTAGTACCAGG +
Preference number: 5 (lower is better)
Translates to: PVPSLLQVHLLSRST*STDVPMGCDASSTR
Trigger: CCTGGTACTACTGGCATCACATCCCATGGGCACATCTGTGCTCCAGGTGCTCCTGCTCAGCAGGTGTACCTGCAAGAGACTGGGAACTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS TCA 90 bp GCTTACTCAGCCGACTTTGCCCTGGCAACTGCTGCCTCTCTTGTCTaGAGTCTGGGCATAGCAGCAGCAGCTGATTTTGGCCTGCCAGCT +
Preference number: 5 (lower is better)
Translates to: AYSADFALATAASLV*SLGIAAAADFGLPA
Trigger: AGCTGGCAGGCCAAAATCAGCTGCTGCTGCTATGCCCAGACTTCAGACAAGAGAGGCAGCAGTTGCCAGGGCAAAGTCGGCTGAGTAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS GCA 90 bp ACAGCAGCTGAGACATTCCCTGGAGAAAATCCCGCTCCAAACACATaGACCAGCCTTCCACCCAGGCAGCCGAAGTTCTCCGTCACTGCT +
Preference number: 5 (lower is better)
Translates to: TAAETFPGENPAPNT*TSLPPRQPKFSVTA
Trigger: AGCAGTGACGGAGAACTTCGGCTGCCTGGGTGGAAGGCTGGTGCATGTGTTTGGAGCGGGATTTTCTCCAGGGAATGTCTCAGCTGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS GCA 90 bp CCGCAGGAGGCTTTCTTCTCTTGGGAAAGCCCCAAGCTGCCACTTTaGTTACTCAGCCGACTTTGCCCTGGCAACTGCTGCCTCTCTTGT +
Preference number: 5 (lower is better)
Translates to: PQEAFFSWESPKLPL*LLSRLCPGNCCLSC
Trigger: ACAAGAGAGGCAGCAGTTGCCAGGGCAAAGTCGGCTGAGTAAGCAAAGTGGCAGCTTGGGGCTTTCCCAAGAGAAGAAAGCCTCCTGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS CCA 90 bp GCTCTGCTTCCAGGTAGTACATGGCTCCACCCAACAGCTCCAACTTaGGAGTCTTCTGCTGCCAGGTCCCTTCATCCCTATTCTGCTCCC +
Preference number: 5 (lower is better)
Translates to: ALLPGSTWLHPTAPT*ESSAARSLHPYSAP
Trigger: GGGAGCAGAATAGGGATGAAGGGACCTGGCAGCAGAAGACTCCCAAGTTGGAGCTGTTGGGTGGAGCCATGTACTACCTGGAAGCAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CCA 90 bp CTGTCGCCATGGCAACTGTCAAATCACACTGCACATAGGTGTGTCTaGCAGCCTCACAGCTGTCCTCCTCACGCTTCAGGCCACACAGGA +
Preference number: 5 (lower is better)
Translates to: LSPWQLSNHTAHRCV*QPHSCPPHASGHTG
Trigger: TCCTGTGTGGCCTGAAGCGTGAGGAGGACAGCTGTGAGGCTGCCAGACACACCTATGTGCAGTGTGATTTGACAGTTGCCATGGCGACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS TCA 90 bp TGTAGCATTAGCCAGGACTCGGCAGGGAGCACCACACACAGCAGCTaGGACATTCCCTGGAGAAAATCCCGCTCCAAACACATGCACCAG +
Preference number: 5 (lower is better)
Translates to: CSISQDSAGSTTHSS*DIPWRKSRSKHMHQ
Trigger: CTGGTGCATGTGTTTGGAGCGGGATTTTCTCCAGGGAATGTCTCAGCTGCTGTGTGTGGTGCTCCCTGCCGAGTCCTGGCTAATGCTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS TCA 90 bp TGCACTCCCTTCAACTGGACCTGGCTGGGCTCTTCTGGGAAGGACTaGACGATCACTCTGGCTCCCATATCCCTGGATCCTAGCATCTTC +
Preference number: 5 (lower is better)
Translates to: CTPFNWTWLGSSGKD*TITLAPISLDPSIF
Trigger: GAAGATGCTAGGATCCAGGGATATGGGAGCCAGAGTGATCGTTCAGTCCTTCCCAGAAGAGCCCAGCCAGGTCCAGTTGAAGGGAGTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS GCA 90 bp CCTCCAGACTGTGAAGAGGGATGGAGCATCCAGACAGGCTCACGTTaGCCTGGAAGGACTGTGTCTCAACATCACAGTTCAGGTTCCCCA +
Preference number: 5 (lower is better)
Translates to: PPDCEEGWSIQTGSR*PGRTVSQHHSSGSP
Trigger: TGGGGAACCTGAACTGTGATGTTGAGACACAGTCCTTCCAGGGCAACGTGAGCCTGTCTGGATGCTCCATCCCTCTTCACAGTCTGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS GCA 90 bp TCTTGGGAAAGCCCCAAGCTGCCACTTTGCTTACTCAGCCGACTTTaGCCTGGCAACTGCTGCCTCTCTTGTCTGAAGTCTGGGCATAGC +
Preference number: 5 (lower is better)
Translates to: SWESPKLPLCLLSRL*PGNCCLSCLKSGHS
Trigger: GCTATGCCCAGACTTCAGACAAGAGAGGCAGCAGTTGCCAGGGCAAAGTCGGCTGAGTAAGCAAAGTGGCAGCTTGGGGCTTTCCCAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS CCA 90 bp CAGCCAGGTGTTGTGAATCTGGACACCAATCCTCATCCCCCTGCTTaGGGCTATCCCATGATGCTCTGCTTCCAGGTAGTACATGGCTCC +
Preference number: 5 (lower is better)
Translates to: QPGVVNLDTNPHPPA*GYPMMLCFQVVHGS
Trigger: GGAGCCATGTACTACCTGGAAGCAGAGCATCATGGGATAGCCCCAAGCAGGGGGATGAGGATTGGTGTCCAGATTCACAACACCTGGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CCA 90 bp GTACTTGGAGAGGATAGATGCCAGCCTCCAGACTGTGAAGAGGGATaGAGCATCCAGACAGGCTCACGTTGCCCTGGAAGGACTGTGTCT +
Preference number: 5 (lower is better)
Translates to: VLGEDRCQPPDCEEG*SIQTGSRCPGRTVS
Trigger: AGACACAGTCCTTCCAGGGCAACGTGAGCCTGTCTGGATGCTCCATCCCTCTTCACAGTCTGGAGGCTGGCATCTATCCTCTCCAAGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CCA 90 bp CCCCCTCACAGTAAGTATGGTCCCACCACATGCCGAACCCTGCGATaGGAAGATGGCCATTATCCGAGGCATCACTGCAAATTGCTGGAG +
Preference number: 5 (lower is better)
Translates to: PPHSKYGPTTCRTLR*EDGHYPRHHCKLLE
Trigger: CTCCAGCAATTTGCAGTGATGCCTCGGATAATGGCCATCTTCCCATCGCAGGGTTCGGCATGTGGTGGGACCATACTTACTGTGAGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CCA 90 bp CGATGTTCACCGTCAGGCAGGTCTGCTGGTCAATATAGACTGACGTaGTGTTCTGTCCTCTCAGGCCTGTGCCCTCTATGGTCAAGAGGC +
Preference number: 5 (lower is better)
Translates to: RCSPSGRSAGQYRLT*CSVLSGLCPLWSRG
Trigger: GCCTCTTGACCATAGAGGGCACAGGCCTGAGAGGACAGAACACCACGTCAGTCTATATTGACCAGCAGACCTGCCTGACGGTGAACATCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS TCA 90 bp TCTGGGCTCGGACTCGGATCTGGTGCTTCTCCCGTAGGTAAGTGGTaGCCACATCAGGATTCAGCCAGGTGTTGTGAATCTGGACACCAA +
Preference number: 5 (lower is better)
Translates to: SGLGLGSGASPVGKW*PHQDSARCCESGHQ
Trigger: TTGGTGTCCAGATTCACAACACCTGGCTGAATCCTGATGTGGTCACCACTTACCTACGGGAGAAGCACCAGATCCGAGTCCGAGCCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS TCA 90 bp AGAGTGAGTGAGCTCAGATGCTTATGGAAGGCTTGCCCCAAGACTTaGAACTGCACTCCCTTCAACTGGACCTGGCTGGGCTCTTCTGGG +
Preference number: 5 (lower is better)
Translates to: RVSELRCLWKACPKT*NCTPFNWTWLGSSG
Trigger: CCCAGAAGAGCCCAGCCAGGTCCAGTTGAAGGGAGTGCAGTTTCAAGTCTTGGGGCAAGCCTTCCATAAGCATCTGAGCTCACTCACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS GCA 90 bp AGCAACCCCCTCACAGTAAGTATGGTCCCACCACATGCCGAACCCTaGGATGGGAAGATGGCCATTATCCGAGGCATCACTGCAAATTGC +
Preference number: 5 (lower is better)
Translates to: SNPLTVSMVPPHAEP*DGKMAIIRGITANC
Trigger: GCAATTTGCAGTGATGCCTCGGATAATGGCCATCTTCCCATCGCAGGGTTCGGCATGTGGTGGGACCATACTTACTGTGAGGGGGTTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CCA 90 bp CAGAAGCAATTGGCCATTCTCCACTGTGACGTTGTCGCCATCTTGTaGCAGCCTTTCAGGAAACCAGCTGTGAGTCCTGGACCATCTCCG +
Preference number: 5 (lower is better)
Translates to: QKQLAILHCDVVAIL*QPFRKPAVSPGPSP
Trigger: CGGAGATGGTCCAGGACTCACAGCTGGTTTCCTGAAAGGCTGCCACAAGATGGCGACAACGTCACAGTGGAGAATGGCCAATTGCTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CCA 90 bp TCTGATCCTGCCACAACGTTGCCATGGAGGTTGATGTCCTTTACCTaGTTCACTTTGATTCCCGCCACCCAAATGGTGGACCACGCTGGC +
Preference number: 5 (lower is better)
Translates to: SDPATTLPWRLMSFT*FTLIPATQMVDHAG
Trigger: GCCAGCGTGGTCCACCATTTGGGTGGCGGGAATCAAAGTGAACCAGGTAAAGGACATCAACCTCCATGGCAACGTTGTGGCAGGATCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS TCA 90 bp GGACTGTGTCTCAACATCACAGTTCAGGTTCCCCAGAAGGATGACTaGGTTGGAGAGGTTACTTCCTCCCACATGCAGGCTCAGGCTGCT +
Preference number: 5 (lower is better)
Translates to: GLCLNITVQVPQKDD*VGEVTSSHMQAQAA
Trigger: AGCAGCCTGAGCCTGCATGTGGGAGGAAGTAACCTCTCCAACTCAGTCATCCTTCTGGGGAACCTGAACTGTGATGTTGAGACACAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS TCA 90 bp GGAAGGACTGTGTCTCAACATCACAGTTCAGGTTCCCCAGAAGGATaGCTGAGTTGGAGAGGTTACTTCCTCCCACATGCAGGCTCAGGC +
Preference number: 5 (lower is better)
Translates to: GRTVSQHHSSGSPEG*LSWRGYFLPHAGSG
Trigger: GCCTGAGCCTGCATGTGGGAGGAAGTAACCTCTCCAACTCAGTCATCCTTCTGGGGAACCTGAACTGTGATGTTGAGACACAGTCCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS TCA 90 bp GTGACGTTGTCGCCATCTTGTGGCAGCCTTTCAGGAAACCAGCTGTaGGTCCTGGACCATCTCCGGCAGAACTGTAAAGAAAAGTTGCCC +
Preference number: 5 (lower is better)
Translates to: VTLSPSCGSLSGNQL*VLDHLRQNCKEKLP
Trigger: GGGCAACTTTTCTTTACAGTTCTGCCGGAGATGGTCCAGGACTCACAGCTGGTTTCCTGAAAGGCTGCCACAAGATGGCGACAACGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS TCA 90 bp TCAGACCAAAGCAGTTCACAAGAGGAGCACTTGTGGCCTCGGATGTaGAAGCCAAGTCTCTCTGATCCTGCCACAACGTTGCCATGGAGG +
Preference number: 5 (lower is better)
Translates to: SDQSSSQEEHLWPRM*KPSLSDPATTLPWR
Trigger: CCTCCATGGCAACGTTGTGGCAGGATCAGAGAGACTTGGCTTTCACATCCGAGGCCACAAGTGCTCCTCTTGTGAACTGCTTTGGTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS GCA 90 bp TCGTGGTCCTGGATTTGGACTGCTTACCAGCTGTCCCCCGAAGTATaGTTCCAGGAAGTACAGACCCTCATGTGCTTCAGACAGCACAGA +
Preference number: 5 (lower is better)
Translates to: SWSWIWTAYQLSPEV*FQEVQTLMCFRQHR
Trigger: TCTGTGCTGTCTGAAGCACATGAGGGTCTGTACTTCCTGGAAGCATACTTCGGGGGACAGCTGGTAAGCAGTCCAAATCCAGGACCACGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS GCA 90 bp TCCTGTGACCAAAACCCAAATGGAGAACTGGCATTAGGGACAATCTaGCACCTGTACCCTGGGGTGGCTTCAGTCAGTTCCAGTCCCTCA +
Preference number: 5 (lower is better)
Translates to: SCDQNPNGELALGTI*HLYPGVASVSSSPS
Trigger: TGAGGGACTGGAACTGACTGAAGCCACCCCAGGGTACAGGTGGCAGATTGTCCCTAATGCCAGTTCTCCATTTGGGTTTTGGTCACAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS GCA 90 bp GATTCAGCCAGGTGTTGTGAATCTGGACACCAATCCTCATCCCCCTaGTTGGGGCTATCCCATGATGCTCTGCTTCCAGGTAGTACATGG +
Preference number: 5 (lower is better)
Translates to: DSARCCESGHQSSSP*LGLSHDALLPGSTW
Trigger: CCATGTACTACCTGGAAGCAGAGCATCATGGGATAGCCCCAAGCAGGGGGATGAGGATTGGTGTCCAGATTCACAACACCTGGCTGAATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS GCA 90 bp AGAGTTAAGAAGCAACCCCCTCACAGTAAGTATGGTCCCACCACATaGCGAACCCTGCGATGGGAAGATGGCCATTATCCGAGGCATCAC +
Preference number: 5 (lower is better)
Translates to: RVKKQPPHSKYGPTT*RTLRWEDGHYPRHH
Trigger: GTGATGCCTCGGATAATGGCCATCTTCCCATCGCAGGGTTCGGCATGTGGTGGGACCATACTTACTGTGAGGGGGTTGCTTCTTAACTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CCA 90 bp AGGGAGAAGGAAGCTCCAGGCAAGGGGTCACCCTCCAGGCTAACCTaGCAGAGAATGGTGTGGTCTCCCAAACTCAAAATCACACAAGTA +
Preference number: 5 (lower is better)
Translates to: REKEAPGKGSPSRLT*QRMVWSPKLKITQV
Trigger: TACTTGTGTGATTTTGAGTTTGGGAGACCACACCATTCTCTGCCAGGTTAGCCTGGAGGGTGACCCCTTGCCTGGAGCTTCCTTCTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CCA 90 bp ACTGGACCTGGCTGGGCTCTTCTGGGAAGGACTGAACGATCACTCTaGCTCCCATATCCCTGGATCCTAGCATCTTCTCACTCATGGAAT +
Preference number: 5 (lower is better)
Translates to: TGPGWALLGRTERSL*LPYPWILASSHSWN
Trigger: ATTCCATGAGTGAGAAGATGCTAGGATCCAGGGATATGGGAGCCAGAGTGATCGTTCAGTCCTTCCCAGAAGAGCCCAGCCAGGTCCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS-3UTR CAA 90 bp ATAGTGGGTACCCCAAACTCACTAAAGGCAAAGCTTAAGCAACCATCCTCTTCTCCAGCACTGGGGAGTTaGCCGGAGGGGGCTGGAGAT +
Preference number: 5 (lower is better)
Translates to: IVGTPNSLKAKLKQPSSSPALGS*PEGAGD
Trigger: ATCTCCAGCCCCCTCCGGCAAACTCCCCAGTGCTGG...AGAAGAGGATGGTTGCTTAAGCTTTGCCTTTAGTGAGTTTGGGGTACCCACTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CAA 90 bp CCATCCTCTTCTTTCCTACTCCCCCATATCTGCTACTGGAACTTCCATTCCCAAACTGATTCCACCAGATaGCCCCCTGGGCGAGCCGTT +
Preference number: 5 (lower is better)
Translates to: PSSSFLLPHICYWNFHSQTDSTR*PPGRAV
Trigger: AACGGCTCGCCCAGGGGGCAATCTGGTGGAATCAGT...TTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGAGTAGGAAAGAAGAGGATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS TCA 90 bp GATGTCACCATCAATGGAGTACCACACAGAATGGACACAGGGAGTTaGCCCTTGGAGGTACTGGAAAGAGCAGGAACCTGGGCAATGAGC +
Preference number: 5 (lower is better)
Translates to: DVTINGVPHRMDTGS*PLEVLERAGTWAMS
Trigger: GCTCATTGCCCAGGTTCCTGCTCTTTCCAGTACCTCCAAGGGTCAACTCCCTGTGTCCATTCTGTGTGGTACTCCATTGATGGTGACATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS TCA 90 bp TCATCCACAAATACCATCGGCTCATCAGCTGTGGTGGCTAACCTCTaGCCCCTAATCAGCACAGTGGTCAGAGACCCACTGGTGTTTGTG +
Preference number: 5 (lower is better)
Translates to: SSTNTIGSSAVVANL*PLISTVVRDPLVFV
Trigger: CACAAACACCAGTGGGTCTCTGACCACTGTGCTGATTAGGGGTCAGAGGTTAGCCACCACAGCTGATGAGCCGATGGTATTTGTGGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS TCA 90 bp ACAAGAGGAGCACTTGTGGCCTCGGATGTGAAAGCCAAGTCTCTCTaGTCCTGCCACAACGTTGCCATGGAGGTTGATGTCCTTTACCTG +
Preference number: 5 (lower is better)
Translates to: TRGALVASDVKAKSL*SCHNVAMEVDVLYL
Trigger: CAGGTAAAGGACATCAACCTCCATGGCAACGTTGTGGCAGGATCAGAGAGACTTGGCTTTCACATCCGAGGCCACAAGTGCTCCTCTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CCA 90 bp TGTCGCCATCTTGTGGCAGCCTTTCAGGAAACCAGCTGTGAGTCCTaGACCATCTCCGGCAGAACTGTAAAGAAAAGTTGCCCTGAGTGT +
Preference number: 5 (lower is better)
Translates to: CRHLVAAFQETSCES*TISGRTVKKSCPEC
Trigger: ACACTCAGGGCAACTTTTCTTTACAGTTCTGCCGGAGATGGTCCAGGACTCACAGCTGGTTTCCTGAAAGGCTGCCACAAGATGGCGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CCA 90 bp ACAATGTGGCGGCTAACTTTCCTTCTGGACACTCCATTCATCAACTaGTGGGGGCACTGGTTCACCTTGCCCAGCATGACCTTCATTCTC +
Preference number: 5 (lower is better)
Translates to: TMWRLTFLLDTPFIN*WGHWFTLPSMTFIL
Trigger: GAGAATGAAGGTCATGCTGGGCAAGGTGAACCAGTGCCCCCACCAGTTGATGAATGGAGTGTCCAGAAGGAAAGTTAGCCGCCACATTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp TCCATTCCCAAAGATATCCTGACTACGGACAATGGTGTCACTGTTGACACCCTCTCCTCATCCCCCTGCTaGGGGCTATCCCATGATGCT +
Preference number: 5 (lower is better)
Translates to: SIPKDILTTDNGVTVDTLSSSPC*GLSHDA
Trigger: AGCATCATGGGATAGCCCCAAGCAGGGGGATGAGGA...GAGGGTGTCAACAGTGACACCATTGTCCGTAGTCAGGATATCTTTGGGAATGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CAA 90 bp ATGGCACACTGTTCCAATAATGGAACACTGGGCACATGGGAGTTATTTATATCCCGGGCGAAGAACCTGTaGCCAGCCCAGACCTCCACG +
Preference number: 5 (lower is better)
Translates to: MAHCSNNGTLGTWELFISRAKNL*PAQTST
Trigger: CGTGGAGGTCTGGGCTGGCAACAGGTTCTTCGCCCG...GGATATAAATAACTCCCATGTGCCCAGTGTTCCATTATTGGAACAGTGTGCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CAA 90 bp ACACTGGGCACATGGGAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGCTTTCCCCACCAAGCTaGGTGAAGGACCACGGGCGA +
Preference number: 5 (lower is better)
Translates to: TLGTWELFISYCLRSWPRLSPPS*VKDHGR
Trigger: TCGCCCGTGGTCCTTCACCAAGCTTGGTGGGGAAAG...CCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTCCCATGTGCCCAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CAA 90 bp TTGAGGGTCAATAAGGCTCTGGGGGAACCAATTCCTCAAATCACACTGTATCTGCTGGGGCCAAGTCTCTaGTCTGGCACACAACGTGGC +
Preference number: 5 (lower is better)
Translates to: LRVNKALGEPIPQITLYLLGPSL*SGTQRG
Trigger: GCCACGTTGTGTGCCAGACAAGAGACTTGGCCCCAG...CAGATACAGTGTGATTTGAGGAATTGGTTCCCCCAGAGCCTTATTGACCCTCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CAA 90 bp CCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATTCAGGGCCTTACTCAGCCGACTTaGCCCTGGCAACTGCTGCCT +
Preference number: 5 (lower is better)
Translates to: PCRHNSCLPVLLIELIQGLTQPT*PWQLLP
Trigger: AGGCAGCAGTTGCCAGGGCAAAGTCGGCTGAGTAAG...GCCCTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS TCA 90 bp ATGACAGGACTTGCCTCTTCCCTTATGAAAAGAGTGCAATTCCCCTaGCACTCGCTGGTTAGCCCATTGACCAGGACTGTGACGTTCAGG +
Preference number: 5 (lower is better)
Translates to: MTGLASSLMKRVQFP*HSLVSPLTRTVTFR
Trigger: CCTGAACGTCACAGTCCTGGTCAATGGGCTAACCAGCGAGTGTCAGGGGAATTGCACTCTTTTCATAAGGGAAGAGGCAAGTCCTGTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS TCA 90 bp TGGCCCCAGCGTTTCCGTATCTCAGTAATCTTGACGGTAATTGGCTaGTTGGGCGTCTCACACTCCATCTCTGCCTCAGTTTCCATGGTA +
Preference number: 5 (lower is better)
Translates to: WPQRFRISVILTVIG*LGVSHSISASVSMV
Trigger: TACCATGGAAACTGAGGCAGAGATGGAGTGTGAGACGCCCAATCAGCCAATTACCGTCAAGATTACTGAGATACGGAAACGCTGGGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS TCA 90 bp GCAGCCCTGTATGAAAGACTCTCTCATAGCTCCCACCAGAGTGAGTaGGCTCAGATGCTTATGGAAGGCTTGCCCCAAGACTTGAAACTG +
Preference number: 5 (lower is better)
Translates to: AALYERLSHSSHQSE*AQMLMEGLPQDLKL
Trigger: CAGTTTCAAGTCTTGGGGCAAGCCTTCCATAAGCATCTGAGCTCACTCACTCTGGTGGGAGCTATGAGAGAGTCTTTCATACAGGGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS GCA 90 bp CAAATCCAAGAAAACAGGAAAGACGTCACAGGGAACACTCCGCAGTaGGGGCACCACCATGTTCACGTTCACCAGGTGTATCTCCAATTG +
Preference number: 5 (lower is better)
Translates to: QIQENRKDVTGNTPQ*GHHHVHVHQVYLQL
Trigger: CAATTGGAGATACACCTGGTGAACGTGAACATGGTGGTGCCCGCACTGCGGAGTGTTCCCTGTGACGTCTTTCCTGTTTTCTTGGATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS GCA 90 bp CTTCCTCCCACATGCAGGCTCAGGCTGCTATTTGTGATTTCTCCTTaGATGGCAGTGACTACTGGTGTTGCTGCCGCTTCATACATGAAG +
Preference number: 5 (lower is better)
Translates to: LPPTCRLRLLFVISP*MAVTTGVAAASYMK
Trigger: CTTCATGTATGAAGCGGCAGCAACACCAGTAGTCACTGCCATGCAAGGAGAAATCACAAATAGCAGCCTGAGCCTGCATGTGGGAGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS GCA 90 bp TGCCGAACCCTGCGATGGGAAGATGGCCATTATCCGAGGCATCACTaGAAATTGCTGGAGCACCACAGACATATTAGCAAATCCCATCTG +
Preference number: 5 (lower is better)
Translates to: CRTLRWEDGHYPRHH*KLLEHHRHISKSHL
Trigger: CAGATGGGATTTGCTAATATGTCTGTGGTGCTCCAGCAATTTGCAGTGATGCCTCGGATAATGGCCATCTTCCCATCGCAGGGTTCGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS GCA 90 bp CAGAGACCCACTGGTGTTTGTGGACAAGGCATCCATGACAGGACTTaGCTCTTCCCTTATGAAAAGAGTGCAATTCCCCTGACACTCGCT +
Preference number: 5 (lower is better)
Translates to: QRPTGVCGQGIHDRT*LFPYEKSAIPLTLA
Trigger: AGCGAGTGTCAGGGGAATTGCACTCTTTTCATAAGGGAAGAGGCAAGTCCTGTCATGGATGCCTTGTCCACAAACACCAGTGGGTCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CCA 90 bp TGTCTGCGCCTTGGAAAACTTGAAAGTACAGCTATCTCGTGGTCCTaGATTTGGACTGCTTACCAGCTGTCCCCCGAAGTATGCTTCCAG +
Preference number: 5 (lower is better)
Translates to: CLRLGKLESTAISWS*IWTAYQLSPEVCFQ
Trigger: CTGGAAGCATACTTCGGGGGACAGCTGGTAAGCAGTCCAAATCCAGGACCACGAGATAGCTGTACTTTCAAGTTTTCCAAGGCGCAGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CCA 90 bp GCTCAGGCTGCTATTTGTGATTTCTCCTTGCATGGCAGTGACTACTaGTGTTGCTGCCGCTTCATACATGAAGGTGAAGCCTTTCCCCAC +
Preference number: 5 (lower is better)
Translates to: AQAAICDFSLHGSDY*CCCRFIHEGEAFPH
Trigger: GTGGGGAAAGGCTTCACCTTCATGTATGAAGCGGCAGCAACACCAGTAGTCACTGCCATGCAAGGAGAAATCACAAATAGCAGCCTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CCA 90 bp GTTCTGGCCCCAGCGTTTCCGTATCTCAGTAATCTTGACGGTAATTaGCTGATTGGGCGTCTCACACTCCATCTCTGCCTCAGTTTCCAT +
Preference number: 5 (lower is better)
Translates to: VLAPAFPYLSNLDGN*LIGRLTLHLCLSFH
Trigger: ATGGAAACTGAGGCAGAGATGGAGTGTGAGACGCCCAATCAGCCAATTACCGTCAAGATTACTGAGATACGGAAACGCTGGGGCCAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CCA 90 bp GAAGGATGCAGTCCATTCTGCCTCTGTTTTAGGAAATACAGAAACTaGTGGAGGCAGACCCAGGGCTCTCCCATCCAGATCCTTGAAGAG +
Preference number: 5 (lower is better)
Translates to: EGCSPFCLCFRKYRN*WRQTQGSPIQILEE
Trigger: CTCTTCAAGGATCTGGATGGGAGAGCCCTGGGTCTGCCTCCACCAGTTTCTGTATTTCCTAAAACAGAGGCAGAATGGACTGCATCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CCA 90 bp ATGTGGCGGCTAACTTTCCTTCTGGACACTCCATTCATCAACTGGTaGGGGCACTGGTTCACCTTGCCCAGCATGACCTTCATTCTCATA +
Preference number: 5 (lower is better)
Translates to: MWRLTFLLDTPFINW*GHWFTLPSMTFILI
Trigger: TATGAGAATGAAGGTCATGCTGGGCAAGGTGAACCAGTGCCCCCACCAGTTGATGAATGGAGTGTCCAGAAGGAAAGTTAGCCGCCACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp TCACTTCCCCAGCTTATTATCCAGAAATACTGGGAACATTCTGCCTTTCAGGCCTCCTCATCCCCCTGCTaGGGGCTATCCCATGATGCT +
Preference number: 5 (lower is better)
Translates to: SLPQLIIQKYWEHSAFQASSSPC*GLSHDA
Trigger: AGCATCATGGGATAGCCCCAAGCAGGGGGATGAGGA...GGCCTGAAAGGCAGAATGTTCCCAGTATTTCTGGATAATAAGCTGGGGAAGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp CCTTCTATAAAAGAAGCTCAAAGCATTGTGGGTGGTCAATCCAGAGAATGCTTACCAGCACTGGGGAGTTaGCCGGAGGGGGCTGGAGAT +
Preference number: 5 (lower is better)
Translates to: PSIKEAQSIVGGQSRECLPALGS*PEGAGD
Trigger: ATCTCCAGCCCCCTCCGGCAAACTCCCCAGTGCTGG...TAAGCATTCTCTGGATTGACCACCCACAATGCTTTGAGCTTCTTTTATAGAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp ATGCCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATTCAGCCAGACAGGCTCACGTaGCCCTGGAAGGACTGTGTC +
Preference number: 5 (lower is better)
Translates to: MPCRHNSCLPVLLIELIQPDRLT*PWKDCV
Trigger: GACACAGTCCTTCCAGGGCAACGTGAGCCTGTCTGG...CTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp TCCCCCATATCTGCTACTGGAACTTCCATTCCCAAAGATATCCTGACTACGGACTTCTCCACTGTGACGTaGTCGCCATCTTGTGGCAGC +
Preference number: 5 (lower is better)
Translates to: SPISATGTSIPKDILTTDFSTVT*SPSCGS
Trigger: GCTGCCACAAGATGGCGACAACGTCACAGTGGAGAA...GTCCGTAGTCAGGATATCTTTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CAA 90 bp GTTATTCCTACGCAGAGGGATAGGATAAAACATGCCTCCCAGAAAGACTGGTCTCCAGTTCCCAGTCTCTaGCAGGTACACCTGCTGAGC +
Preference number: 5 (lower is better)
Translates to: VIPTQRDRIKHASQKDWSPVPSL*QVHLLS
Trigger: GCTCAGCAGGTGTACCTGCAAGAGACTGGGAACTGG...AGACCAGTCTTTCTGGGAGGCATGTTTTATCCTATCCCTCTGCGTAGGAATAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS TCA 90 bp ATTCCTCACAGCCAGGAACTTGACTCCATAGGGAAAGAAGGGAGTTaGGTAGGAACTCCCGTAGAGTGTGATCTGAGCTCTGCCTTGGAA +
Preference number: 5 (lower is better)
Translates to: IPHSQELDSIGKEGS*VGTPVECDLSSALE
Trigger: TTCCAAGGCAGAGCTCAGATCACACTCTACGGGAGTTCCTACTCAACTCCCTTCTTTCCCTATGGAGTCAAGTTCCTGGCTGTGAGGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS TCA 90 bp GTGAACCGTGCAGAGAAAGAGTTCCATTCCTCACAGCCAGGAACTTaGCTCCATAGGGAAAGAAGGGAGTTGAGTAGGAACTCCCGTAGA +
Preference number: 5 (lower is better)
Translates to: VNRAEKEFHSSQPGT*LHRERRELSRNSRR
Trigger: TCTACGGGAGTTCCTACTCAACTCCCTTCTTTCCCTATGGAGTCAAGTTCCTGGCTGTGAGGAATGGAACTCTTTCTCTGCACGGTTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS TCA 90 bp CAGCTGGCTATTGAAGAACCAGTCACAGCCTTGGTTCTGACCTGGTaGTGGAAGAAATGGAAAAGACAGACCCACTCGACTCCCACATCT +
Preference number: 5 (lower is better)
Translates to: QLAIEEPVTALVLTW*WKKWKRQTHSTPTS
Trigger: AGATGTGGGAGTCGAGTGGGTCTGTCTTTTCCATTTCTTCCATCACCAGGTCAGAACCAAGGCTGTGACTGGTTCTTCAATAGCCAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS TCA 90 bp TCGGCTGGACTTCCTGAAGGACCCCACAAACAGTCTCCCCCTACATaGTACGTCAGGCTGAATTTGTATATTTCGGGTCAACAGTCCAAC +
Preference number: 5 (lower is better)
Translates to: SAGLPEGPHKQSPPT*YVRLNLYISGQQSN
Trigger: GTTGGACTGTTGACCCGAAATATACAAATTCAGCCTGACGTATCATGTAGGGGGAGACTGTTTGTGGGGTCCTTCAGGAAGTCCAGCCGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS TCA 90 bp TCACTTTGTGCCATGGCTCCTGAGGCCACTGATTTGGTTCTGAGGTaGATACAGGCCACAGAATACCAATTCGACCTCCTCTTGGATTGG +
Preference number: 5 (lower is better)
Translates to: SLCAMAPEATDLVLR*IQATEYQFDLLLDW
Trigger: CCAATCCAAGAGGAGGTCGAATTGGTATTCTGTGGCCTGTATTCACCTCAGAACCAAATCAGTGGCCTCAGGAGCCATGGCACAAAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS TCA 90 bp ATTCCTCACTTTGTGCCATGGCTCCTGAGGCCACTGATTTGGTTCTaGGGTGAATACAGGCCACAGAATACCAATTCGACCTCCTCTTGG +
Preference number: 5 (lower is better)
Translates to: IPHFVPWLLRPLIWF*GEYRPQNTNSTSSW
Trigger: CCAAGAGGAGGTCGAATTGGTATTCTGTGGCCTGTATTCACCTCAGAACCAAATCAGTGGCCTCAGGAGCCATGGCACAAAGTGAGGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS GCA 90 bp AGCCTGCTCAGTGGTTACTGCGTTGAAGAAGGATGCAGTCCATTCTaGCTCTGTTTTAGGAAATACAGAAACTGGTGGAGGCAGACCCAG +
Preference number: 5 (lower is better)
Translates to: SLLSGYCVEEGCSPF*LCFRKYRNWWRQTQ
Trigger: CTGGGTCTGCCTCCACCAGTTTCTGTATTTCCTAAAACAGAGGCAGAATGGACTGCATCCTTCTTCAACGCAGTAACCACTGAGCAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS CCA 90 bp CGCCTTGGAAAACTTGAAAGTACAGCTATCTCGTGGTCCTGGATTTaGACTGCTTACCAGCTGTCCCCCGAAGTATGCTTCCAGGAAGTA +
Preference number: 5 (lower is better)
Translates to: RLGKLESTAISWSWI*TAYQLSPEVCFQEV
Trigger: TACTTCCTGGAAGCATACTTCGGGGGACAGCTGGTAAGCAGTCCAAATCCAGGACCACGAGATAGCTGTACTTTCAAGTTTTCCAAGGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CCA 90 bp AAATGTAGAGGTAAGGCCACGATTCAAGCAGTTGCTCTGTCGCCATaGCAACTGTCAAATCACACTGCACATAGGTGTGTCTGGCAGCCT +
Preference number: 5 (lower is better)
Translates to: KCRGKATIQAVALSP*QLSNHTAHRCVWQP
Trigger: AGGCTGCCAGACACACCTATGTGCAGTGTGATTTGACAGTTGCCATGGCGACAGAGCAACTGCTTGAATCGTGGCCTTACCTCTACATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CCA 90 bp TGCAGTAAGTTGAGGATGCTTGTGTTAGTGTCCAGCAGAAGCAATTaGCCATTCTCCACTGTGACGTTGTCGCCATCTTGTGGCAGCCTT +
Preference number: 5 (lower is better)
Translates to: CSKLRMLVLVSSRSN*PFSTVTLSPSCGSL
Trigger: AAGGCTGCCACAAGATGGCGACAACGTCACAGTGGAGAATGGCCAATTGCTTCTGCTGGACACTAACACAAGCATCCTCAACTTACTGCA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CCA 90 bp GCTCTTCTGGGAAGGACTGAACGATCACTCTGGCTCCCATATCCCTaGATCCTAGCATCTTCTCACTCATGGAATACAAACAGTGCTGCA +
Preference number: 5 (lower is better)
Translates to: ALLGRTERSLWLPYP*ILASSHSWNTNSAA
Trigger: TGCAGCACTGTTTGTATTCCATGAGTGAGAAGATGCTAGGATCCAGGGATATGGGAGCCAGAGTGATCGTTCAGTCCTTCCCAGAAGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CCA 90 bp GGATGCAGTCCATTCTGCCTCTGTTTTAGGAAATACAGAAACTGGTaGAGGCAGACCCAGGGCTCTCCCATCCAGATCCTTGAAGAGATA +
Preference number: 5 (lower is better)
Translates to: GCSPFCLCFRKYRNW*RQTQGSPIQILEEI
Trigger: TATCTCTTCAAGGATCTGGATGGGAGAGCCCTGGGTCTGCCTCCACCAGTTTCTGTATTTCCTAAAACAGAGGCAGAATGGACTGCATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CCA 90 bp CTAACTTTCCTTCTGGACACTCCATTCATCAACTGGTGGGGGCACTaGTTCACCTTGCCCAGCATGACCTTCATTCTCATATCTTCTCCC +
Preference number: 5 (lower is better)
Translates to: LTFLLDTPFINWWGH*FTLPSMTFILISSP
Trigger: GGGAGAAGATATGAGAATGAAGGTCATGCTGGGCAAGGTGAACCAGTGCCCCCACCAGTTGATGAATGGAGTGTCCAGAAGGAAAGTTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp GTTATTCCTACGCAGAGGGATAGGATAAAACATGCCTCCCAGAAAGACTGGTCTCTCGTGGTCCTGGATTaGGACTGCTTACCAGCTGTC +
Preference number: 5 (lower is better)
Translates to: VIPTQRDRIKHASQKDWSLVVLD*DCLPAV
Trigger: GACAGCTGGTAAGCAGTCCAAATCCAGGACCACGAG...AGACCAGTCTTTCTGGGAGGCATGTTTTATCCTATCCCTCTGCGTAGGAATAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp ATAGTGGGTACCCCAAACTCACTAAAGGCAAAGCTTAAGCAACCATCCTCTTCTCCCAACAGCTCCAACTaGGGAGTCTTCTGCTGCCAG +
Preference number: 5 (lower is better)
Translates to: IVGTPNSLKAKLKQPSSSPNSSN*GVFCCQ
Trigger: CTGGCAGCAGAAGACTCCCAAGTTGGAGCTGTTGGG...AGAAGAGGATGGTTGCTTAAGCTTTGCCTTTAGTGAGTTTGGGGTACCCACTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CAA 90 bp CAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATAGCACTGATTCCACCAGATaGCCCCCTGGGCGAGCCGTT +
Preference number: 5 (lower is better)
Translates to: QNSMPHARAWQVTEDVYSTDSTR*PPGRAV
Trigger: AACGGCTCGCCCAGGGGGCAATCTGGTGGAATCAGT...GCTATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp CAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATAGCCTTTCCCCACCAAGCTaGGTGAAGGACCACGGGCGA +
Preference number: 5 (lower is better)
Translates to: QNSMPHARAWQVTEDVYSLSPPS*VKDHGR
Trigger: TCGCCCGTGGTCCTTCACCAAGCTTGGTGGGGAAAG...GCTATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp ATGGCACACTGTTCCAATAATGGAACACTGGGCACATGGGAGTTATTTATATCCCCAGACAGGCTCACGTaGCCCTGGAAGGACTGTGTC +
Preference number: 5 (lower is better)
Translates to: MAHCSNNGTLGTWELFISPDRLT*PWKDCV
Trigger: GACACAGTCCTTCCAGGGCAACGTGAGCCTGTCTGG...GGATATAAATAACTCCCATGTGCCCAGTGTTCCATTATTGGAACAGTGTGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CAA 90 bp CCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATTCAGGGCGACGTTGTCGCCATCTaGTGGCAGCCTTTCAGGAAA +
Preference number: 5 (lower is better)
Translates to: PCRHNSCLPVLLIELIQGDVVAI*WQPFRK
Trigger: TTTCCTGAAAGGCTGCCACAAGATGGCGACAACGTC...GCCCTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp GTTATTCCTACGCAGAGGGATAGGATAAAACATGCCTCCCAGAAAGACTGGTCTTTCTCCACTGTGACGTaGTCGCCATCTTGTGGCAGC +
Preference number: 5 (lower is better)
Translates to: VIPTQRDRIKHASQKDWSFSTVT*SPSCGS
Trigger: GCTGCCACAAGATGGCGACAACGTCACAGTGGAGAA...AGACCAGTCTTTCTGGGAGGCATGTTTTATCCTATCCCTCTGCGTAGGAATAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp TCTCATATAGTGGGTACCCCAAACTCACTAAAGGCAAAGCTTAAGCAACCATCCCTGCCTTGGAAGGGCTaGTCTTCGGATCCAATCCGG +
Preference number: 5 (lower is better)
Translates to: SHIVGTPNSLKAKLKQPSLPWKG*SSDPIR
Trigger: CCGGATTGGATCCGAAGACAAGCCCTTCCAAGGCAG...GGATGGTTGCTTAAGCTTTGCCTTTAGTGAGTTTGGGGTACCCACTATATGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CAA 90 bp TCACTTCCCCAGCTTATTATCCAGAAATACTGGGAACATTCTGCCTTTCAGGCCGGGCCTGGAATGGTATaGTTGTATCCTCCCCAGCCT +
Preference number: 5 (lower is better)
Translates to: SLPQLIIQKYWEHSAFQAGPGMV*LYPPQP
Trigger: AGGCTGGGGAGGATACAACAATACCATTCCAGGCCC...GGCCTGAAAGGCAGAATGTTCCCAGTATTTCTGGATAATAAGCTGGGGAAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp TCCATTCCCAAAGATATCCTGACTACGGACAATGGTGTCACTGTTGACACCCTCGCCACACTCAGAACATaGCTTCTGTCCACAGGGAAG +
Preference number: 5 (lower is better)
Translates to: SIPKDILTTDNGVTVDTLATLRT*LLSTGK
Trigger: CTTCCCTGTGGACAGAAGCAATGTTCTGAGTGTGGC...GAGGGTGTCAACAGTGACACCATTGTCCGTAGTCAGGATATCTTTGGGAATGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CAA 90 bp TCCCCCATATCTGCTACTGGAACTTCCATTCCCAAAGATATCCTGACTACGGACCTCACATGGTGGCCCTaGACTTCTTTCACAGTGAGG +
Preference number: 5 (lower is better)
Translates to: SPISATGTSIPKDILTTDLTWWP*TSFTVR
Trigger: CCTCACTGTGAAAGAAGTCAAGGGCCACCATGTGAG...GTCCGTAGTCAGGATATCTTTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CAA 90 bp ACACTGGGCACATGGGAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGGATCCTGCCACAACGTaGCCATGGAGGTTGATGTCC +
Preference number: 5 (lower is better)
Translates to: TLGTWELFISYCLRSWPRDPATT*PWRLMS
Trigger: GGACATCAACCTCCATGGCAACGTTGTGGCAGGATC...CCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTCCCATGTGCCCAGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CAA 90 bp TCCATTCCCAAAGATATCCTGACTACGGACAATGGTGTCACTGTTGACACCCTCCGACCTCCTCTTGGATaGGAGGGAGCTCTATCTGTT +
Preference number: 5 (lower is better)
Translates to: SIPKDILTTDNGVTVDTLRPPLG*EGALSV
Trigger: AACAGATAGAGCTCCCTCCAATCCAAGAGGAGGTCG...GAGGGTGTCAACAGTGACACCATTGTCCGTAGTCAGGATATCTTTGGGAATGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CAA 90 bp GTTATTCCTACGCAGAGGGATAGGATAAAACATGCCTCCCAGAAAGACTGGTCTAGACACACCTGCCCCTaGATGCCCTGCAGACATAAC +
Preference number: 5 (lower is better)
Translates to: VIPTQRDRIKHASQKDWSRHTCP*MPCRHN
Trigger: GTTATGTCTGCAGGGCATCAAGGGGCAGGTGTGTCT...AGACCAGTCTTTCTGGGAGGCATGTTTTATCCTATCCCTCTGCGTAGGAATAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS TCA 90 bp CTAAGGGATTTTCTAAAGTACCAACTTTCAGCTCCCCGCCTGCAATaGCCATGCATGCCACACTCAGAACATTGCTTCTGTCCACAGGGA +
Preference number: 5 (lower is better)
Translates to: LRDFLKYQLSAPRLQ*PCMPHSEHCFCPQG
Trigger: TCCCTGTGGACAGAAGCAATGTTCTGAGTGTGGCATGCATGGTCATTGCAGGCGGGGAGCTGAAAGTTGGTACTTTAGAAAATCCCTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS TCA 90 bp CTGAAGGACCCCACAAACAGTCTCCCCCTACATGATACGTCAGGCTaGATTTGTATATTTCGGGTCAACAGTCCAACCTCAGCAGCCAAA +
Preference number: 5 (lower is better)
Translates to: LKDPTNSLPLHDTSG*ICIFRVNSPTSAAK
Trigger: TTTGGCTGCTGAGGTTGGACTGTTGACCCGAAATATACAAATTCAGCCTGACGTATCATGTAGGGGGAGACTGTTTGTGGGGTCCTTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CCA 90 bp GTTCCCCTCTATAACATTGGTGGGACTGCAGATATAGATGCCAGATaGTGTCAACATTTCAGGATTGGAGAGTCCCTCGGCACCAGAAAC +
Preference number: 5 (lower is better)
Translates to: VPLYNIGGTADIDAR*CQHFRIGESLGTRN
Trigger: GTTTCTGGTGCCGAGGGACTCTCCAATCCTGAAATGTTGACACCATCTGGCATCTATATCTGCAGTCCCACCAATGTTATAGAGGGGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CCA 90 bp GACCTCCTCTTGGATTGGAGGGAGCTCTATCTGTTGATGTCAAGTTaGCTGAGTGCGGCTTCACTTTGTCCTGAATGCAGTCAAAAGAAG +
Preference number: 5 (lower is better)
Translates to: DLLLDWRELYLLMSS*LSAASLCPECSQKK
Trigger: CTTCTTTTGACTGCATTCAGGACAAAGTGAAGCCGCACTCAGCCAACTTGACATCAACAGATAGAGCTCCCTCCAATCCAAGAGGAGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CCA 90 bp GATGATGGTCGACTTCTCCTTCCTAGTCACAGGCAAGACAGCAAATaGCTTGGATCGAGCTGTAAAATTGACTCCTGGAGGAGAAGTGAC +
Preference number: 5 (lower is better)
Translates to: DDGRLLLPSHRQDSK*LGSSCKIDSWRRSD
Trigger: GTCACTTCTCCTCCAGGAGTCAATTTTACAGCTCGATCCAAGCCATTTGCTGTCTTGCCTGTGACTAGGAAGGAGAAGTCGACCATCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp GCCAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATACCCAACAGCTCCAACTaGGGAGTCTTCTGCTGCCAG +
Preference number: 5 (lower is better)
Translates to: AKIPCHMLEPGKLLKMFIPNSSN*GVFCCQ
Trigger: CTGGCAGCAGAAGACTCCCAAGTTGGAGCTGTTGGG...TATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp ATGGCACACTGTTCCAATAATGGAACACTGGGCACATGGGAGTTATTTATATCCCTCCTAGAGGTGGACTaGTCCGCTGTCGTCTCTGTG +
Preference number: 5 (lower is better)
Translates to: MAHCSNNGTLGTWELFISLLEVD*SAVVSV
Trigger: CACAGAGACGACAGCGGACAAGTCCACCTCTAGGAG...GGATATAAATAACTCCCATGTGCCCAGTGTTCCATTATTGGAACAGTGTGCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CAA 90 bp CAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATAGCCTCCTAGAGGTGGACTaGTCCGCTGTCGTCTCTGTG +
Preference number: 5 (lower is better)
Translates to: QNSMPHARAWQVTEDVYSLLEVD*SAVVSV
Trigger: CACAGAGACGACAGCGGACAAGTCCACCTCTAGGAG...GCTATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp CCCGTACAAATGTGTGAATTTGGTGAAATTGCCTTTAACAACCTTACCAAATGTCGGGCGAAGAACCTGTaGCCAGCCCAGACCTCCACG +
Preference number: 5 (lower is better)
Translates to: PVQMCEFGEIAFNNLTKCRAKNL*PAQTST
Trigger: CGTGGAGGTCTGGGCTGGCAACAGGTTCTTCGCCCG...ACATTTGGTAAGGTTGTTAAAGGCAATTTCACCAAATTCACACATTTGTACGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp CCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATTCAGGGCAGGCATCACTGCAAATaGCTGGAGCACCACAGACAT +
Preference number: 5 (lower is better)
Translates to: PCRHNSCLPVLLIELIQGRHHCK*LEHHRH
Trigger: ATGTCTGTGGTGCTCCAGCAATTTGCAGTGATGCCT...GCCCTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp GACATGAATGAACATAGAGCTGCTCTCTTTGCTTTTGGTGTTTCCCTAATTCTCCTGGGGCCAAGTCTCTaGTCTGGCACACAACGTGGC +
Preference number: 5 (lower is better)
Translates to: DMNEHRAALFAFGVSLILLGPSL*SGTQRG
Trigger: GCCACGTTGTGTGCCAGACAAGAGACTTGGCCCCAG...GAGAATTAGGGAAACACCAAAAGCAAAGAGAGCAGCTCTATGTTCATTCATGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp ATGCCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATTCAGCCACGATTCAAGCAGTaGCTCTGTCGCCATGGCAAC +
Preference number: 5 (lower is better)
Translates to: MPCRHNSCLPVLLIELIQPRFKQ*LCRHGN
Trigger: GTTGCCATGGCGACAGAGCAACTGCTTGAATCGTGG...CTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp ACACTGGGCACATGGGAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGGTCCAGCAGAAGCAATaGGCCATTCTCCACTGTGAC +
Preference number: 5 (lower is better)
Translates to: TLGTWELFISYCLRSWPRVQQKQ*AILHCD
Trigger: GTCACAGTGGAGAATGGCCAATTGCTTCTGCTGGAC...CCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTCCCATGTGCCCAGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CAA 90 bp CCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATTCAGGGCAGGGAAAGAAGGGAGTaGAGTAGGAACTCCCGTAGA +
Preference number: 5 (lower is better)
Translates to: PCRHNSCLPVLLIELIQGRERRE*SRNSRR
Trigger: TCTACGGGAGTTCCTACTCAACTCCCTTCTTTCCCT...GCCCTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp TCCATTCCCAAAGATATCCTGACTACGGACAATGGTGTCACTGTTGACACCCTCTTACCTTCTGGAGCATaGGCCTCCTGGCATGAAACA +
Preference number: 5 (lower is better)
Translates to: SIPKDILTTDNGVTVDTLLPSGA*ASWHET
Trigger: TGTTTCATGCCAGGAGGCCAATGCTCCAGAAGGTAA...GAGGGTGTCAACAGTGACACCATTGTCCGTAGTCAGGATATCTTTGGGAATGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CAA 90 bp TTGAGGGTCAATAAGGCTCTGGGGGAACCAATTCCTCAAATCACACTGTATCTGGTCAACATTTCAGGATaGGAGAGTCCCTCGGCACCA +
Preference number: 5 (lower is better)
Translates to: LRVNKALGEPIPQITLYLVNISG*ESPSAP
Trigger: TGGTGCCGAGGGACTCTCCAATCCTGAAATGTTGAC...CAGATACAGTGTGATTTGAGGAATTGGTTCCCCCAGAGCCTTATTGACCCTCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CAA 90 bp TTGAGGGTCAATAAGGCTCTGGGGGAACCAATTCCTCAAATCACACTGTATCTGGCCTTCTTCAACACCTaGCCATGTTTCAGGGAGGGA +
Preference number: 5 (lower is better)
Translates to: LRVNKALGEPIPQITLYLAFFNT*PCFREG
Trigger: TCCCTCCCTGAAACATGGCAAGGTGTTGAAGAAGGC...CAGATACAGTGTGATTTGAGGAATTGGTTCCCCCAGAGCCTTATTGACCCTCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CAA 90 bp ATAGTGGGTACCCCAAACTCACTAAAGGCAAAGCTTAAGCAACCATCCTCTTCTGGGCCTGGAATGGTATaGTTGTATCCTCCCCAGCCT +
Preference number: 5 (lower is better)
Translates to: IVGTPNSLKAKLKQPSSSGPGMV*LYPPQP
Trigger: AGGCTGGGGAGGATACAACAATACCATTCCAGGCCC...AGAAGAGGATGGTTGCTTAAGCTTTGCCTTTAGTGAGTTTGGGGTACCCACTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CAA 90 bp TCACTTCCCCAGCTTATTATCCAGAAATACTGGGAACATTCTGCCTTTCAGGCCGAGCTAAGGACTATTTaGTCATGGGGGCGCCAATCC +
Preference number: 5 (lower is better)
Translates to: SLPQLIIQKYWEHSAFQAELRTI*SWGRQS
Trigger: GGATTGGCGCCCCCATGACAAAATAGTCCTTAGCTC...GGCCTGAAAGGCAGAATGTTCCCAGTATTTCTGGATAATAAGCTGGGGAAGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp TCACTTCCCCAGCTTATTATCCAGAAATACTGGGAACATTCTGCCTTTCAGGCCCGACCTCCTCTTGGATaGGAGGGAGCTCTATCTGTT +
Preference number: 5 (lower is better)
Translates to: SLPQLIIQKYWEHSAFQARPPLG*EGALSV
Trigger: AACAGATAGAGCTCCCTCCAATCCAAGAGGAGGTCG...GGCCTGAAAGGCAGAATGTTCCCAGTATTTCTGGATAATAAGCTGGGGAAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp CCATCCTCTTCTTTCCTACTCCCCCATATCTGCTACTGGAACTTCCATTCCCAACAATTCGACCTCCTCTaGGATTGGAGGGAGCTCTAT +
Preference number: 5 (lower is better)
Translates to: PSSSFLLPHICYWNFHSQQFDLL*DWRELY
Trigger: ATAGAGCTCCCTCCAATCCAAGAGGAGGTCGAATTG...TTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGAGTAGGAAAGAAGAGGATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CAA 90 bp GATGTTTATAGCTGCTATTTAGGCCCAAAGAGTCAATTCTGGCCTCAGGGATCAGGGCACTGGTTCACCTaGCCCAGCATGACCTTCATT +
Preference number: 5 (lower is better)
Translates to: DVYSCYLGPKSQFWPQGSGHWFT*PSMTFI
Trigger: AATGAAGGTCATGCTGGGCAAGGTGAACCAGTGCCC...TGATCCCTGAGGCCAGAATTGACTCTTTGGGCCTAAATAGCAGCTATAAACATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp ATGCCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATTCAGAACTGTTCTTGGTCCTaGGTGGCCTCACTGGGCAGT +
Preference number: 5 (lower is better)
Translates to: MPCRHNSCLPVLLIELIQNCSWS*VASLGS
Trigger: ACTGCCCAGTGAGGCCACCAAGGACCAAGAACAGTT...CTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp TCACTTCCCCAGCTTATTATCCAGAAATACTGGGAACATTCTGCCTTTCAGGCCAGAGCTCAACTGTTCTaGGTCCTTGGTGGCCTCACT +
Preference number: 5 (lower is better)
Translates to: SLPQLIIQKYWEHSAFQARAQLF*VLGGLT
Trigger: AGTGAGGCCACCAAGGACCAAGAACAGTTGAGCTCT...GGCCTGAAAGGCAGAATGTTCCCAGTATTTCTGGATAATAAGCTGGGGAAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS TCA 90 bp GCGTCCATCTTTCCCCCTGGGTGGAACTTTGCACTGAATTCTGCTTaGATTGCTTGTAGCGACATTGATGGCACACGAGTAAGATCCAAA +
Preference number: 5 (lower is better)
Translates to: ASIFPPGWNFALNSA*IACSDIDGTRVRSK
Trigger: TTTGGATCTTACTCGTGTGCCATCAATGTCGCTACAAGCAATTCAAGCAGAATTCAGTGCAAAGTTCCACCCAGGGGGAAAGATGGACGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS TCA 90 bp TCCCAGCCTTTTTCTAAGACTGAAACCATCACAGTGAGGGCCAAGTaGATGGAAACACCTGAGCGTATTTCAATGGGCTCCTCTCCTTGT +
Preference number: 5 (lower is better)
Translates to: SQPFSKTETITVRAK*METPERISMGSSPC
Trigger: ACAAGGAGAGGAGCCCATTGAAATACGCTCAGGTGTTTCCATTCACTTGGCCCTCACTGTGATGGTTTCAGTCTTAGAAAAAGGCTGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS GCA 90 bp TATGGGTCCAAGAAAAACTCCACCATCATATACCACACGCGTGGCTaGAGCAGGATTCACTCCAGTAAGGTTTTCATCAGAGACCCTGAT +
Preference number: 5 (lower is better)
Translates to: YGSKKNSTIIYHTRG*SRIHSSKVFIRDPD
Trigger: ATCAGGGTCTCTGATGAAAACCTTACTGGAGTGAATCCTGCTGCAGCCACGCGTGTGGTATATGATGGTGGAGTTTTTCTTGGACCCATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS GCA 90 bp ACCCTGCTTCCTGCTGCCTCATTAATCTTTCAAAGTTCAGCTTCCTaGAGGCTCCTCCTCTATTCTGAAATCTTCAAAGCCTGCTCAGTG +
Preference number: 5 (lower is better)
Translates to: TLLPAASLIFQSSAS*RLLLYSEIFKACSV
Trigger: CACTGAGCAGGCTTTGAAGATTTCAGAATAGAGGAGGAGCCTGCAGGAAGCTGAACTTTGAAAGATTAATGAGGCAGCAGGAAGCAGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS CCA 90 bp AGCTTGGCTATCTGCCTGAATCCAGAAAGTGTAATTATTTGTCTCTaGAGCCACAAAGAACCCACTGAGCCGTGCTCTGAAAGGTTGTCC +
Preference number: 5 (lower is better)
Translates to: SLAICLNPESVIICL*SHKEPTEPCSERLS
Trigger: GGACAACCTTTCAGAGCACGGCTCAGTGGGTTCTTTGTGGCTCCAGAGACAAATAATTACACTTTCTGGATTCAGGCAGATAGCCAAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CCA 90 bp TTCCAGTCCACAGCATCTTCTAAAGCCAGCACTGTGTCTAGGGCATaGGCAGTTGCTCTAAGACAGGTGACAATTACTTCTGGTAGTGAA +
Preference number: 5 (lower is better)
Translates to: FQSTASSKASTVSRA*AVALRQVTITSGSE
Trigger: TTCACTACCAGAAGTAATTGTCACCTGTCTTAGAGCAACTGCCCATGCCCTAGACACAGTGCTGGCTTTAGAAGATGCTGTGGACTGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS-3UTR CAA 90 bp ACACTGGGCACATGGGAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGCTCCTCAATGGTTGTTaGAATCAGATGGGCTGTGGC +
Preference number: 5 (lower is better)
Translates to: TLGTWELFISYCLRSWPRLLNGC*NQMGCG
Trigger: GCCACAGCCCATCTGATTCAAACAACCATTGAGGAG...CCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTCCCATGTGCCCAGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CAA 90 bp TCTCATATAGTGGGTACCCCAAACTCACTAAAGGCAAAGCTTAAGCAACCATCCCTGCTTCTGACGTACTaGGAGAGGATAGATGCCAGC +
Preference number: 5 (lower is better)
Translates to: SHIVGTPNSLKAKLKQPSLLLTY*ERIDAS
Trigger: GCTGGCATCTATCCTCTCCAAGTACGTCAGAAGCAG...GGATGGTTGCTTAAGCTTTGCCTTTAGTGAGTTTGGGGTACCCACTATATGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CAA 90 bp CATTCTGGCTGCCATCAATCTCCTCCCAGTCCTCAATCAATTTCTTCTCAATTTTCGCTGGTTAGCCCATaGACCAGGACTGTGACGTTC +
Preference number: 5 (lower is better)
Translates to: HSGCHQSPPSPQSISSQFSLVSP*TRTVTF
Trigger: GAACGTCACAGTCCTGGTCAATGGGCTAACCAGCGA...AAATTGAGAAGAAATTGATTGAGGACTGGGAGGAGATTGATGGCAGCCAGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CAA 90 bp ATAGTGGGTACCCCAAACTCACTAAAGGCAAAGCTTAAGCAACCATCCTCTTCTGACGTTGTCGCCATCTaGTGGCAGCCTTTCAGGAAA +
Preference number: 5 (lower is better)
Translates to: IVGTPNSLKAKLKQPSSSDVVAI*WQPFRK
Trigger: TTTCCTGAAAGGCTGCCACAAGATGGCGACAACGTC...AGAAGAGGATGGTTGCTTAAGCTTTGCCTTTAGTGAGTTTGGGGTACCCACTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CAA 90 bp CAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATAGCGATCTGAGCTCTGCCTaGGAAGGGCTTGTCTTCGGA +
Preference number: 5 (lower is better)
Translates to: QNSMPHARAWQVTEDVYSDLSSA*EGLVFG
Trigger: TCCGAAGACAAGCCCTTCCAAGGCAGAGCTCAGATC...GCTATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp TCACTTCCCCAGCTTATTATCCAGAAATACTGGGAACATTCTGCCTTTCAGGCCTTACCTTCTGGAGCATaGGCCTCCTGGCATGAAACA +
Preference number: 5 (lower is better)
Translates to: SLPQLIIQKYWEHSAFQALPSGA*ASWHET
Trigger: TGTTTCATGCCAGGAGGCCAATGCTCCAGAAGGTAA...GGCCTGAAAGGCAGAATGTTCCCAGTATTTCTGGATAATAAGCTGGGGAAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp TCTCATATAGTGGGTACCCCAAACTCACTAAAGGCAAAGCTTAAGCAACCATCCGGCTTGCCCCAAGACTaGAAACTGCACTCCCTTCAA +
Preference number: 5 (lower is better)
Translates to: SHIVGTPNSLKAKLKQPSGLPQD*KLHSLQ
Trigger: TTGAAGGGAGTGCAGTTTCAAGTCTTGGGGCAAGCC...GGATGGTTGCTTAAGCTTTGCCTTTAGTGAGTTTGGGGTACCCACTATATGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CAA 90 bp GATGTTTATAGCTGCTATTTAGGCCCAAAGAGTCAATTCTGGCCTCAGGGATCAGGCTTGCCCCAAGACTaGAAACTGCACTCCCTTCAA +
Preference number: 5 (lower is better)
Translates to: DVYSCYLGPKSQFWPQGSGLPQD*KLHSLQ
Trigger: TTGAAGGGAGTGCAGTTTCAAGTCTTGGGGCAAGCC...TGATCCCTGAGGCCAGAATTGACTCTTTGGGCCTAAATAGCAGCTATAAACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp TCTCATATAGTGGGTACCCCAAACTCACTAAAGGCAAAGCTTAAGCAACCATCCTGCCTCAGCTGGCTATaGAAGAACCAGTCACAGCCT +
Preference number: 5 (lower is better)
Translates to: SHIVGTPNSLKAKLKQPSCLSWL*KNQSQP
Trigger: AGGCTGTGACTGGTTCTTCAATAGCCAGCTGAGGCA...GGATGGTTGCTTAAGCTTTGCCTTTAGTGAGTTTGGGGTACCCACTATATGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CAA 90 bp GATGTTTATAGCTGCTATTTAGGCCCAAAGAGTCAATTCTGGCCTCAGGGATCATGCCTCAGCTGGCTATaGAAGAACCAGTCACAGCCT +
Preference number: 5 (lower is better)
Translates to: DVYSCYLGPKSQFWPQGSCLSWL*KNQSQP
Trigger: AGGCTGTGACTGGTTCTTCAATAGCCAGCTGAGGCA...TGATCCCTGAGGCCAGAATTGACTCTTTGGGCCTAAATAGCAGCTATAAACATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp ACACTGGGCACATGGGAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGCCTGGAATGGTATTGTaGTATCCTCCCCAGCCTTCT +
Preference number: 5 (lower is better)
Translates to: TLGTWELFISYCLRSWPRPGMVL*YPPQPS
Trigger: AGAAGGCTGGGGAGGATACAACAATACCATTCCAGG...CCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTCCCATGTGCCCAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CAA 90 bp GATGTTTATAGCTGCTATTTAGGCCCAAAGAGTCAATTCTGGCCTCAGGGATCACTCACATGGTGGCCCTaGACTTCTTTCACAGTGAGG +
Preference number: 5 (lower is better)
Translates to: DVYSCYLGPKSQFWPQGSLTWWP*TSFTVR
Trigger: CCTCACTGTGAAAGAAGTCAAGGGCCACCATGTGAG...TGATCCCTGAGGCCAGAATTGACTCTTTGGGCCTAAATAGCAGCTATAAACATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp TCCATTCCCAAAGATATCCTGACTACGGACAATGGTGTCACTGTTGACACCCTCTTTACCTGGTTCACTTaGATTCCCGCCACCCAAATG +
Preference number: 5 (lower is better)
Translates to: SIPKDILTTDNGVTVDTLFTWFT*IPATQM
Trigger: CATTTGGGTGGCGGGAATCAAAGTGAACCAGGTAAA...GAGGGTGTCAACAGTGACACCATTGTCCGTAGTCAGGATATCTTTGGGAATGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CAA 90 bp CCATCCTCTTCTTTCCTACTCCCCCATATCTGCTACTGGAACTTCCATTCCCAACTTGAATGCGCCACATaGTCAGACCAAAGCAGTTCA +
Preference number: 5 (lower is better)
Translates to: PSSSFLLPHICYWNFHSQLECAT*SDQSSS
Trigger: TGAACTGCTTTGGTCTGACAATGTGGCGCATTCAAG...TTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGAGTAGGAAAGAAGAGGATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CAA 90 bp TCACTTCCCCAGCTTATTATCCAGAAATACTGGGAACATTCTGCCTTTCAGGCCCAATTCGACCTCCTCTaGGATTGGAGGGAGCTCTAT +
Preference number: 5 (lower is better)
Translates to: SLPQLIIQKYWEHSAFQAQFDLL*DWRELY
Trigger: ATAGAGCTCCCTCCAATCCAAGAGGAGGTCGAATTG...GGCCTGAAAGGCAGAATGTTCCCAGTATTTCTGGATAATAAGCTGGGGAAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp CCATCCTCTTCTTTCCTACTCCCCCATATCTGCTACTGGAACTTCCATTCCCAATCAGTGGTTACTGCGTaGAAGAAGGATGCAGTCCAT +
Preference number: 5 (lower is better)
Translates to: PSSSFLLPHICYWNFHSQSVVTA*KKDAVH
Trigger: ATGGACTGCATCCTTCTTCAACGCAGTAACCACTGA...TTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGAGTAGGAAAGAAGAGGATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CAA 90 bp ATAGTGGGTACCCCAAACTCACTAAAGGCAAAGCTTAAGCAACCATCCTCTTCTACAATGGTGTCACTGTaGACACCCTCTCCACAGTCC +
Preference number: 5 (lower is better)
Translates to: IVGTPNSLKAKLKQPSSSTMVSL*TPSPQS
Trigger: GGACTGTGGAGAGGGTGTCAACAGTGACACCATTGT...AGAAGAGGATGGTTGCTTAAGCTTTGCCTTTAGTGAGTTTGGGGTACCCACTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CAA 90 bp GCCAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATACAGCAGCAGCTGATTTaGGCCTGCCAGCTGGTATCT +
Preference number: 5 (lower is better)
Translates to: AKIPCHMLEPGKLLKMFIQQQLI*ACQLVS
Trigger: AGATACCAGCTGGCAGGCCAAAATCAGCTGCTGCTG...TATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS TCA 90 bp CAAACAGTGCTGCAGATTACCTTCTGGAGCATTGGCCTCCTGGCATaGAACAAGCAGCTTCTCCCTCTCATTAGTGAGATTTCCTTGTAT +
Preference number: 5 (lower is better)
Translates to: QTVLQITFWSIGLLA*NKQLLPLISEISLY
Trigger: ATACAAGGAAATCTCACTAATGAGAGGGAGAAGCTGCTTGTTTCATGCCAGGAGGCCAATGCTCCAGAAGGTAATCTGCAGCACTGTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS TCA 90 bp CTATCTGTTGATGTCAAGTTGGCTGAGTGCGGCTTCACTTTGTCCTaGATGCAGTCAAAAGAAGAGCTGGTGGCCACAATGACTGAATTC +
Preference number: 5 (lower is better)
Translates to: LSVDVKLAECGFTLS*MQSKEELVATMTEF
Trigger: GAATTCAGTCATTGTGGCCACCAGCTCTTCTTTTGACTGCATTCAGGACAAAGTGAAGCCGCACTCAGCCAACTTGACATCAACAGATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS-3UTR CAA 90 bp ACACTGGGCACATGGGAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGCAGGTGTATCTCCAATaGAGAGCCATTGTTGGGGTA +
Preference number: 5 (lower is better)
Translates to: TLGTWELFISYCLRSWPRQVYLQ*RAIVGV
Trigger: TACCCCAACAATGGCTCTCAATTGGAGATACACCTG...CCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTCCCATGTGCCCAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CAA 90 bp TTGAGGGTCAATAAGGCTCTGGGGGAACCAATTCCTCAAATCACACTGTATCTGATGGGTGTCTGCGCCTaGGAAAACTTGAAAGTACAG +
Preference number: 5 (lower is better)
Translates to: LRVNKALGEPIPQITLYLMGVCA*ENLKVQ
Trigger: CTGTACTTTCAAGTTTTCCAAGGCGCAGACACCCAT...CAGATACAGTGTGATTTGAGGAATTGGTTCCCCCAGAGCCTTATTGACCCTCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CAA 90 bp TCCCCCATATCTGCTACTGGAACTTCCATTCCCAAAGATATCCTGACTACGGACTTGTTCATGTGGCCTTaGTATGCAAGACACAGGTGT +
Preference number: 5 (lower is better)
Translates to: SPISATGTSIPKDILTTDLFMWP*YARHRC
Trigger: ACACCTGTGTCTTGCATACAAAGGCCACATGAACAA...GTCCGTAGTCAGGATATCTTTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CAA 90 bp ATAGTGGGTACCCCAAACTCACTAAAGGCAAAGCTTAAGCAACCATCCTCTTCTGTGAAGTCACTGGCATaGAGGTACCTGGATGTGAAG +
Preference number: 5 (lower is better)
Translates to: IVGTPNSLKAKLKQPSSSVKSLA*RYLDVK
Trigger: CTTCACATCCAGGTACCTCAATGCCAGTGACTTCAC...AGAAGAGGATGGTTGCTTAAGCTTTGCCTTTAGTGAGTTTGGGGTACCCACTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CAA 90 bp ATGCCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATTCAGGTGAAGTCACTGGCATaGAGGTACCTGGATGTGAAG +
Preference number: 5 (lower is better)
Translates to: MPCRHNSCLPVLLIELIQVKSLA*RYLDVK
Trigger: CTTCACATCCAGGTACCTCAATGCCAGTGACTTCAC...CTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp CAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATAGCAATGGACACAGGGAGTaGACCCTTGGAGGTACTGGA +
Preference number: 5 (lower is better)
Translates to: QNSMPHARAWQVTEDVYSNGHRE*TLGGTG
Trigger: TCCAGTACCTCCAAGGGTCAACTCCCTGTGTCCATT...GCTATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp CATTCTGGCTGCCATCAATCTCCTCCCAGTCCTCAATCAATTTCTTCTCAATTTATGTCACAGGACCGATaGCCCACAAGTACCCAAACC +
Preference number: 5 (lower is better)
Translates to: HSGCHQSPPSPQSISSQFMSQDR*PTSTQT
Trigger: GGTTTGGGTACTTGTGGGCAATCGGTCCTGTGACAT...AAATTGAGAAGAAATTGATTGAGGACTGGGAGGAGATTGATGGCAGCCAGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CAA 90 bp TCTCATATAGTGGGTACCCCAAACTCACTAAAGGCAAAGCTTAAGCAACCATCCAGAAGGATGACTGAGTaGGAGAGGTTACTTCCTCCC +
Preference number: 5 (lower is better)
Translates to: SHIVGTPNSLKAKLKQPSRRMTE*ERLLPP
Trigger: GGGAGGAAGTAACCTCTCCAACTCAGTCATCCTTCT...GGATGGTTGCTTAAGCTTTGCCTTTAGTGAGTTTGGGGTACCCACTATATGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CAA 90 bp TGGGAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGTCTGATTTTGCACCACGATTCAAGCAGTaGCTCTGTCGCCATGGCAAC +
Preference number: 5 (lower is better)
Translates to: WELFISYCLRSWPRSDFAPRFKQ*LCRHGN
Trigger: GTTGCCATGGCGACAGAGCAACTGCTTGAATCGTGG...TGCAAAATCAGACCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CAA 90 bp TGGGAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGTCTGATTTTGCAGATCTGAGCTCTGCCTaGGAAGGGCTTGTCTTCGGA +
Preference number: 5 (lower is better)
Translates to: WELFISYCLRSWPRSDFADLSSA*EGLVFG
Trigger: TCCGAAGACAAGCCCTTCCAAGGCAGAGCTCAGATC...TGCAAAATCAGACCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CAA 90 bp CCATCCTCTTCTTTCCTACTCCCCCATATCTGCTACTGGAACTTCCATTCCCAACAAAGTTGTCAAAGGTaGCTGAGTACTGCAGAGATC +
Preference number: 5 (lower is better)
Translates to: PSSSFLLPHICYWNFHSQQSCQR*LSTAEI
Trigger: GATCTCTGCAGTACTCAGCAACCTTTGACAACTTTG...TTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGAGTAGGAAAGAAGAGGATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CAA 90 bp TCCTGCGATCTTTTCTTTACATGCTTGGAGCATAAGGCCTTCTGGATCCAGAGCCAAAGTTGTCAAAGGTaGCTGAGTACTGCAGAGATC +
Preference number: 5 (lower is better)
Translates to: SCDLFFTCLEHKAFWIQSQSCQR*LSTAEI
Trigger: GATCTCTGCAGTACTCAGCAACCTTTGACAACTTTG...GCTCTGGATCCAGAAGGCCTTATGCTCCAAGCATGTAAAGAAAAGATCGCAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp GCCAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATAGCCTTCTTCAACACCTaGCCATGTTTCAGGGAGGGA +
Preference number: 5 (lower is better)
Translates to: AKIPCHMLEPGKLLKMFIAFFNT*PCFREG
Trigger: TCCCTCCCTGAAACATGGCAAGGTGTTGAAGAAGGC...TATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp ATGGCACACTGTTCCAATAATGGAACACTGGGCACATGGGAGTTATTTATATCCGAGCTAAGGACTATTTaGTCATGGGGGCGCCAATCC +
Preference number: 5 (lower is better)
Translates to: MAHCSNNGTLGTWELFISELRTI*SWGRQS
Trigger: GGATTGGCGCCCCCATGACAAAATAGTCCTTAGCTC...GGATATAAATAACTCCCATGTGCCCAGTGTTCCATTATTGGAACAGTGTGCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CAA 90 bp CTTCTTTCCTACTCCCCCATATCTGCTACTGGAACTTCCATTCCCAAAGATATCACGTTGCCATGGAGGTaGATGTCCTTTACCTGGTTC +
Preference number: 5 (lower is better)
Translates to: LLSYSPISATGTSIPKDITLPWR*MSFTWF
Trigger: GAACCAGGTAAAGGACATCAACCTCCATGGCAACGT...GATATCTTTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGAGTAGGAAAGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CAA 90 bp ATGCCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATTCAGACGTTGCCATGGAGGTaGATGTCCTTTACCTGGTTC +
Preference number: 5 (lower is better)
Translates to: MPCRHNSCLPVLLIELIQTLPWR*MSFTWF
Trigger: GAACCAGGTAAAGGACATCAACCTCCATGGCAACGT...CTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp GTTATTCCTACGCAGAGGGATAGGATAAAACATGCCTCCCAGAAAGACTGGTCTAGGGAGCTCTATCTGTaGATGTCAAGTTGGCTGAGT +
Preference number: 5 (lower is better)
Translates to: VIPTQRDRIKHASQKDWSRELYL*MSSWLS
Trigger: ACTCAGCCAACTTGACATCAACAGATAGAGCTCCCT...AGACCAGTCTTTCTGGGAGGCATGTTTTATCCTATCCCTCTGCGTAGGAATAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp CCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATTCAGGGCCAGTGCTCCTTACTGTaGGCGAATCACCAATTTCAA +
Preference number: 5 (lower is better)
Translates to: PCRHNSCLPVLLIELIQGQCSLL*ANHQFQ
Trigger: TTGAAATTGGTGATTCGCCAACAGTAAGGAGCACTG...GCCCTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp GACATGAATGAACATAGAGCTGCTCTCTTTGCTTTTGGTGTTTCCCTAATTCTCCCCCAAGCTGCCACTTaGCTTACTCAGCCGACTTTG +
Preference number: 5 (lower is better)
Translates to: DMNEHRAALFAFGVSLILPQAAT*LTQPTL
Trigger: CAAAGTCGGCTGAGTAAGCAAAGTGGCAGCTTGGGG...GAGAATTAGGGAAACACCAAAAGCAAAGAGAGCAGCTCTATGTTCATTCATGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS TCA 90 bp GTTGTCAAGTCCACTTTCCTTATAGAGATGAAGGCCATGAAGACTTaGATGCGCCACATTGTCAGACCAAAGCAGTTCACAAGAGGAGCA +
Preference number: 5 (lower is better)
Translates to: VVKSTFLIEMKAMKT*MRHIVRPKQFTRGA
Trigger: TGCTCCTCTTGTGAACTGCTTTGGTCTGACAATGTGGCGCATTCAAGTCTTCATGGCCTTCATCTCTATAAGGAAAGTGGACTTGACAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS TCA 90 bp CCACGCTGTTCTCTACATGTAACATGGCACCATAGTCAAAGTTCTTaGAAGCCAAGAAGCCAGAGATTCTGGTACAGTTGTCAAGTCCAC +
Preference number: 5 (lower is better)
Translates to: PRCSLHVTWHHSQSS*KPRSQRFWYSCQVH
Trigger: GTGGACTTGACAACTGTACCAGAATCTCTGGCTTCTTGGCTTTCAAGAACTTTGACTATGGTGCCATGTTACATGTAGAGAACAGCGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS GCA 90 bp TTCTTCTCTAAATGTACCTGCGTTGAAGAAGGATGCAGTCCATTCTaGCTCTGTTTTAGGAAATACAGAAACTGGTGGAGGCAGACCCAG +
Preference number: 5 (lower is better)
Translates to: FFSKCTCVEEGCSPF*LCFRKYRNWWRQTQ
Trigger: CTGGGTCTGCCTCCACCAGTTTCTGTATTTCCTAAAACAGAGGCAGAATGGACTGCATCCTTCTTCAACGCAGGTACATTTAGAGAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS CCA 90 bp CTCAATGGTTGTTTGAATCAGATGGGCTGTGGCATTTGCAGGGATTaGCTGACTAGAGACATTGTCCCAAGTAAGGAAGAAGTTTCCTCT +
Preference number: 5 (lower is better)
Translates to: LNGCLNQMGCGICRD*LTRDIVPSKEEVSS
Trigger: AGAGGAAACTTCTTCCTTACTTGGGACAATGTCTCTAGTCAGCCAATCCCTGCAAATGCCACAGCCCATCTGATTCAAACAACCATTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CCA 90 bp GGTGTCAACATTTCAGGATTGGAGAGTCCCTCGGCACCAGAAACCTaGATGATCACGTTGTTTCTTATTATATTTCCATGTCCTGACCAG +
Preference number: 5 (lower is better)
Translates to: GVNISGLESPSAPET*MITLFLIIFPCPDQ
Trigger: CTGGTCAGGACATGGAAATATAATAAGAAACAACGTGATCATCCAGGTTTCTGGTGCCGAGGGACTCTCCAATCCTGAAATGTTGACACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS-3UTR CAA 90 bp ATGCCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATTCAGATGGGTGTCTGCGCCTaGGAAAACTTGAAAGTACAG +
Preference number: 5 (lower is better)
Translates to: MPCRHNSCLPVLLIELIQMGVCA*ENLKVQ
Trigger: CTGTACTTTCAAGTTTTCCAAGGCGCAGACACCCAT...CTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp CTTCTTTCCTACTCCCCCATATCTGCTACTGGAACTTCCATTCCCAAAGATATCACTTGGTGGATAAACTaGGTGAACGATGGGTGTCTG +
Preference number: 5 (lower is better)
Translates to: LLSYSPISATGTSIPKDITWWIN*VNDGCL
Trigger: CAGACACCCATCGTTCACCAAGTTTATCCACCAAGT...GATATCTTTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGAGTAGGAAAGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CAA 90 bp ACACTGGGCACATGGGAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGTTCCTGGAACACCACTaGGTGGATAAACTTGGTGAA +
Preference number: 5 (lower is better)
Translates to: TLGTWELFISYCLRSWPRFLEHH*VDKLGE
Trigger: TTCACCAAGTTTATCCACCAAGTGGTGTTCCAGGAA...CCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTCCCATGTGCCCAGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CAA 90 bp TCACTTCCCCAGCTTATTATCCAGAAATACTGGGAACATTCTGCCTTTCAGGCCTTCCTGGAACACCACTaGGTGGATAAACTTGGTGAA +
Preference number: 5 (lower is better)
Translates to: SLPQLIIQKYWEHSAFQAFLEHH*VDKLGE
Trigger: TTCACCAAGTTTATCCACCAAGTGGTGTTCCAGGAA...GGCCTGAAAGGCAGAATGTTCCCAGTATTTCTGGATAATAAGCTGGGGAAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp TCACTTCCCCAGCTTATTATCCAGAAATACTGGGAACATTCTGCCTTTCAGGCCGTAACTCCTCAATGGTaGTTTGAATCAGATGGGCTG +
Preference number: 5 (lower is better)
Translates to: SLPQLIIQKYWEHSAFQAVTPQW*FESDGL
Trigger: CAGCCCATCTGATTCAAACAACCATTGAGGAGTTAC...GGCCTGAAAGGCAGAATGTTCCCAGTATTTCTGGATAATAAGCTGGGGAAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp TCCCCCATATCTGCTACTGGAACTTCCATTCCCAAAGATATCCTGACTACGGACACTTTGCAACTCGTTTaGTTCACTGTAACCTGCAAG +
Preference number: 5 (lower is better)
Translates to: SPISATGTSIPKDILTTDTLQLV*FTVTCK
Trigger: CTTGCAGGTTACAGTGAACAAAACGAGTTGCAAAGT...GTCCGTAGTCAGGATATCTTTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CAA 90 bp CCTTCTATAAAAGAAGCTCAAAGCATTGTGGGTGGTCAATCCAGAGAATGCTTAATGTCACAGGACCGATaGCCCACAAGTACCCAAACC +
Preference number: 5 (lower is better)
Translates to: PSIKEAQSIVGGQSRECLMSQDR*PTSTQT
Trigger: GGTTTGGGTACTTGTGGGCAATCGGTCCTGTGACAT...TAAGCATTCTCTGGATTGACCACCCACAATGCTTTGAGCTTCTTTTATAGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp CCTTCTATAAAAGAAGCTCAAAGCATTGTGGGTGGTCAATCCAGAGAATGCTTACTGCTTCTGACGTACTaGGAGAGGATAGATGCCAGC +
Preference number: 5 (lower is better)
Translates to: PSIKEAQSIVGGQSRECLLLLTY*ERIDAS
Trigger: GCTGGCATCTATCCTCTCCAAGTACGTCAGAAGCAG...TAAGCATTCTCTGGATTGACCACCCACAATGCTTTGAGCTTCTTTTATAGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp ATGGCACACTGTTCCAATAATGGAACACTGGGCACATGGGAGTTATTTATATCCAGGCATCACTGCAAATaGCTGGAGCACCACAGACAT +
Preference number: 5 (lower is better)
Translates to: MAHCSNNGTLGTWELFISRHHCK*LEHHRH
Trigger: ATGTCTGTGGTGCTCCAGCAATTTGCAGTGATGCCT...GGATATAAATAACTCCCATGTGCCCAGTGTTCCATTATTGGAACAGTGTGCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CAA 90 bp AGCCTGAAGATCTGCAATACTCACCAGATGCCTAAAGAAGAGGTTAAAACATTTTCGCTGGTTAGCCCATaGACCAGGACTGTGACGTTC +
Preference number: 5 (lower is better)
Translates to: SLKICNTHQMPKEEVKTFSLVSP*TRTVTF
Trigger: GAACGTCACAGTCCTGGTCAATGGGCTAACCAGCGA...AAATGTTTTAACCTCTTCTTTAGGCATCTGGTGAGTATTGCAGATCTTCAGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp CCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATTCAGGGCAGAATGATGGAAACATaGACTCTGCCCAATGATCTG +
Preference number: 5 (lower is better)
Translates to: PCRHNSCLPVLLIELIQGRMMET*TLPNDL
Trigger: CAGATCATTGGGCAGAGTCAATGTTTCCATCATTCT...GCCCTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp GACATGAATGAACATAGAGCTGCTCTCTTTGCTTTTGGTGTTTCCCTAATTCTCGTCCAGCAGAAGCAATaGGCCATTCTCCACTGTGAC +
Preference number: 5 (lower is better)
Translates to: DMNEHRAALFAFGVSLILVQQKQ*AILHCD
Trigger: GTCACAGTGGAGAATGGCCAATTGCTTCTGCTGGAC...GAGAATTAGGGAAACACCAAAAGCAAAGAGAGCAGCTCTATGTTCATTCATGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp GATGTTTATAGCTGCTATTTAGGCCCAAAGAGTCAATTCTGGCCTCAGGGATCAGCCATGAAAATCAGCTaGCCCCCTTTAATGTGCAGT +
Preference number: 5 (lower is better)
Translates to: DVYSCYLGPKSQFWPQGSAMKIS*PPLMCS
Trigger: ACTGCACATTAAAGGGGGCAAGCTGATTTTCATGGC...TGATCCCTGAGGCCAGAATTGACTCTTTGGGCCTAAATAGCAGCTATAAACATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp CCCGTACAAATGTGTGAATTTGGTGAAATTGCCTTTAACAACCTTACCAAATGTCTGCCTTGGAAGGGCTaGTCTTCGGATCCAATCCGG +
Preference number: 5 (lower is better)
Translates to: PVQMCEFGEIAFNNLTKCLPWKG*SSDPIR
Trigger: CCGGATTGGATCCGAAGACAAGCCCTTCCAAGGCAG...ACATTTGGTAAGGTTGTTAAAGGCAATTTCACCAAATTCACACATTTGTACGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp CTTCTTTCCTACTCCCCCATATCTGCTACTGGAACTTCCATTCCCAAAGATATCATGCTTATGGAAGGCTaGCCCCAAGACTTGAAACTG +
Preference number: 5 (lower is better)
Translates to: LLSYSPISATGTSIPKDIMLMEG*PQDLKL
Trigger: CAGTTTCAAGTCTTGGGGCAAGCCTTCCATAAGCAT...GATATCTTTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGAGTAGGAAAGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CAA 90 bp GACATGAATGAACATAGAGCTGCTCTCTTTGCTTTTGGTGTTTCCCTAATTCTCGTCAACATTTCAGGATaGGAGAGTCCCTCGGCACCA +
Preference number: 5 (lower is better)
Translates to: DMNEHRAALFAFGVSLILVNISG*ESPSAP
Trigger: TGGTGCCGAGGGACTCTCCAATCCTGAAATGTTGAC...GAGAATTAGGGAAACACCAAAAGCAAAGAGAGCAGCTCTATGTTCATTCATGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp GCCAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATACCTGGAATGGTATTGTaGTATCCTCCCCAGCCTTCT +
Preference number: 5 (lower is better)
Translates to: AKIPCHMLEPGKLLKMFIPGMVL*YPPQPS
Trigger: AGAAGGCTGGGGAGGATACAACAATACCATTCCAGG...TATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp CCATCCTCTTCTTTCCTACTCCCCCATATCTGCTACTGGAACTTCCATTCCCAAACAAGGACAGTTCTGTaGGGTAAAATGAGAACGTCA +
Preference number: 5 (lower is better)
Translates to: PSSSFLLPHICYWNFHSQTRTVL*GKMRTS
Trigger: TGACGTTCTCATTTTACCCAACAGAACTGTCCTTGT...TTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGAGTAGGAAAGAAGAGGATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CAA 90 bp TCCTGCGATCTTTTCTTTACATGCTTGGAGCATAAGGCCTTCTGGATCCAGAGCTACGTCAGGCTGAATTaGTATATTTCGGGTCAACAG +
Preference number: 5 (lower is better)
Translates to: SCDLFFTCLEHKAFWIQSYVRLN*YISGQQ
Trigger: CTGTTGACCCGAAATATACAAATTCAGCCTGACGTA...GCTCTGGATCCAGAAGGCCTTATGCTCCAAGCATGTAAAGAAAAGATCGCAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp ATGGCACACTGTTCCAATAATGGAACACTGGGCACATGGGAGTTATTTATATCCGAAGGCCATGAAGACTaGAATGCGCCACATTGTCAG +
Preference number: 5 (lower is better)
Translates to: MAHCSNNGTLGTWELFISEGHED*NAPHCQ
Trigger: CTGACAATGTGGCGCATTCAAGTCTTCATGGCCTTC...GGATATAAATAACTCCCATGTGCCCAGTGTTCCATTATTGGAACAGTGTGCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CAA 90 bp ATGGCACACTGTTCCAATAATGGAACACTGGGCACATGGGAGTTATTTATATCCTCTGTTGATGTCAAGTaGGCTGAGTGCGGCTTCACT +
Preference number: 5 (lower is better)
Translates to: MAHCSNNGTLGTWELFISSVDVK*AECGFT
Trigger: AGTGAAGCCGCACTCAGCCAACTTGACATCAACAGA...GGATATAAATAACTCCCATGTGCCCAGTGTTCCATTATTGGAACAGTGTGCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CAA 90 bp CAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATAGCTCTGTTGATGTCAAGTaGGCTGAGTGCGGCTTCACT +
Preference number: 5 (lower is better)
Translates to: QNSMPHARAWQVTEDVYSSVDVK*AECGFT
Trigger: AGTGAAGCCGCACTCAGCCAACTTGACATCAACAGA...GCTATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp GATGTTTATAGCTGCTATTTAGGCCCAAAGAGTCAATTCTGGCCTCAGGGATCAGCTAACATAACCATCTaGAGTTTCTGCCTGGGTGCA +
Preference number: 5 (lower is better)
Translates to: DVYSCYLGPKSQFWPQGSANITI*SFCLGA
Trigger: TGCACCCAGGCAGAAACTCAAGATGGTTATGTTAGC...TGATCCCTGAGGCCAGAATTGACTCTTTGGGCCTAAATAGCAGCTATAAACATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp ATGCCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATTCAGGATCGAGCTGTAAAATaGACTCCTGGAGGAGAAGTG +
Preference number: 5 (lower is better)
Translates to: MPCRHNSCLPVLLIELIQDRAVK*TPGGEV
Trigger: CACTTCTCCTCCAGGAGTCAATTTTACAGCTCGATC...CTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp ATGCCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATTCAGACAGTGTCTTCTTTTTaGGGCCCTTGTGATTCTCGG +
Preference number: 5 (lower is better)
Translates to: MPCRHNSCLPVLLIELIQTVSSF*GPCDSR
Trigger: CCGAGAATCACAAGGGCCCAAAAAAGAAGACACTGT...CTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp ATGCCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATTCAGAAGAAGCTCAAAGCATaGTGGGTGGTCAATCCAGAG +
Preference number: 5 (lower is better)
Translates to: MPCRHNSCLPVLLIELIQKKLKA*WVVNPE
Trigger: CTCTGGATTGACCACCCACAATGCTTTGAGCTTCTT...CTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp CCTTCTATAAAAGAAGCTCAAAGCATTGTGGGTGGTCAATCCAGAGAATGCTTAAGCCAGGAAGTTGCCTaGTGGTTGGAAGGTAAGCTC +
Preference number: 5 (lower is better)
Translates to: PSIKEAQSIVGGQSRECLSQEVA*WLEGKL
Trigger: GAGCTTACCTTCCAACCACAAGGCAACTTCCTGGCT...TAAGCATTCTCTGGATTGACCACCCACAATGCTTTGAGCTTCTTTTATAGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS TCA 90 bp GTCCTCGTGAGACTCCAGTCACAGGTGGTATTCTTTACCATGTTTTaGAAGCCGATTGTGAAGGACACAATCATCTTCAGGATCTTGTTC +
Preference number: 5 (lower is better)
Translates to: VLVRLQSQVVFFTMF*KPIVKDTIIFRILF
Trigger: GAACAAGATCCTGAAGATGATTGTGTCCTTCACAATCGGCTTTCAAAACATGGTAAAGAATACCACCTGTGACTGGAGTCTCACGAGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS TCA 90 bp ACAAGAATGTGCAATGTTCTGAGTGAAGGAAAGAAGCGGAGCTTGTaGTGTTTGGTTGGTCATGAGATGGAAAAAGTAGCCATAGCCAGC +
Preference number: 5 (lower is better)
Translates to: TRMCNVLSEGKKRSL*CLVGHEMEKVAIAS
Trigger: GCTGGCTATGGCTACTTTTTCCATCTCATGACCAACCAAACATCACAAGCTCCGCTTCTTTCCTTCACTCAGAACATTGCACATTCTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS TCA 90 bp GGGTATACAAAGAGACCATACCTGGTACAAGAATGTGCAATGTTCTaGGTGAAGGAAAGAAGCGGAGCTTGTGATGTTTGGTTGGTCATG +
Preference number: 5 (lower is better)
Translates to: GYTKRPYLVQECAMF*VKERSGACDVWLVM
Trigger: CATGACCAACCAAACATCACAAGCTCCGCTTCTTTCCTTCACTCAGAACATTGCACATTCTTGTACCAGGTATGGTCTCTTTGTATACCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS TCA 90 bp AAGCTCTGGAACAGAGTGGTGCCAGTGACATTATCCCAAGGTGGCTaGAATTTAGGGTATACAAAGAGACCATACCTGGTACAAGAATGT +
Preference number: 5 (lower is better)
Translates to: KLWNRVVPVTLSQGG*NLGYTKRPYLVQEC
Trigger: ACATTCTTGTACCAGGTATGGTCTCTTTGTATACCCTAAATTTCAGCCACCTTGGGATAATGTCACTGGCACCACTCTGTTCCAGAGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS GCA 90 bp AATCTTGACGGTAATTGGCTGATTGGGCGTCTCACACTCCATCTCTaGCTCAGTTTCCATGGTAATGTTACAGGAGCTATTATAGATGAG +
Preference number: 5 (lower is better)
Translates to: NLDGNWLIGRLTLHL*LSFHGNVTGAIIDE
Trigger: CTCATCTATAATAGCTCCTGTAACATTACCATGGAAACTGAGGCAGAGATGGAGTGTGAGACGCCCAATCAGCCAATTACCGTCAAGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS-3UTR CAA 90 bp CAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATAGCCAGGTGTATCTCCAATaGAGAGCCATTGTTGGGGTA +
Preference number: 5 (lower is better)
Translates to: QNSMPHARAWQVTEDVYSQVYLQ*RAIVGV
Trigger: TACCCCAACAATGGCTCTCAATTGGAGATACACCTG...GCTATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp GAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGTCTGATTTTGCAATTCTCGTGGTCCTGGATTaGGACTGCTTACCAGCTGTC +
Preference number: 5 (lower is better)
Translates to: ELFISYCLRSWPRSDFAILVVLD*DCLPAV
Trigger: GACAGCTGGTAAGCAGTCCAAATCCAGGACCACGAG...AATTGCAAAATCAGACCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CAA 90 bp GCCAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATAACTTGGTGGATAAACTaGGTGAACGATGGGTGTCTG +
Preference number: 5 (lower is better)
Translates to: AKIPCHMLEPGKLLKMFITWWIN*VNDGCL
Trigger: CAGACACCCATCGTTCACCAAGTTTATCCACCAAGT...TATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp ATGGCACACTGTTCCAATAATGGAACACTGGGCACATGGGAGTTATTTATATCCAACCCATTTGTCTCCTaGAGCTTCCAAGATCACTGG +
Preference number: 5 (lower is better)
Translates to: MAHCSNNGTLGTWELFISNPFVS*SFQDHW
Trigger: CCAGTGATCTTGGAAGCTCAAGGAGACAAATGGGTT...GGATATAAATAACTCCCATGTGCCCAGTGTTCCATTATTGGAACAGTGTGCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CAA 90 bp GCCAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATAGAAATGCAAGGAAGCTaGGCTATCTGCCTGAATCCA +
Preference number: 5 (lower is better)
Translates to: AKIPCHMLEPGKLLKMFIEMQGS*AICLNP
Trigger: TGGATTCAGGCAGATAGCCAAGCTTCCTTGCATTTC...TATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp CTTCTTTCCTACTCCCCCATATCTGCTACTGGAACTTCCATTCCCAAAGATATCGTAACTCCTCAATGGTaGTTTGAATCAGATGGGCTG +
Preference number: 5 (lower is better)
Translates to: LLSYSPISATGTSIPKDIVTPQW*FESDGL
Trigger: CAGCCCATCTGATTCAAACAACCATTGAGGAGTTAC...GATATCTTTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGAGTAGGAAAGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CAA 90 bp TCACTTCCCCAGCTTATTATCCAGAAATACTGGGAACATTCTGCCTTTCAGGCCCGTTCCAGAATCAGCTaGAGAAACTGTTACGTTTGT +
Preference number: 5 (lower is better)
Translates to: SLPQLIIQKYWEHSAFQARSRIS*RNCYVC
Trigger: ACAAACGTAACAGTTTCTCAAGCTGATTCTGGAACG...GGCCTGAAAGGCAGAATGTTCCCAGTATTTCTGGATAATAAGCTGGGGAAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp TTCAACACCACCAATTTAATATCTGAATTGCTCCTCTCTCATATAGTGGGTACCAATGGACACAGGGAGTaGACCCTTGGAGGTACTGGA +
Preference number: 5 (lower is better)
Translates to: FNTTNLISELLLSHIVGTNGHRE*TLGGTG
Trigger: TCCAGTACCTCCAAGGGTCAACTCCCTGTGTCCATT...GGTACCCACTATATGAGAGAGGAGCAATTCAGATATTAAATTGGTGGTGTTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CAA 90 bp CAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATAGCTGGCACAAAGAGGCATaGGGAACTTTCCTCGCAAAT +
Preference number: 5 (lower is better)
Translates to: QNSMPHARAWQVTEDVYSWHKEA*GTFLAN
Trigger: ATTTGCGAGGAAAGTTCCCAATGCCTCTTTGTGCCA...GCTATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp ATGGCACACTGTTCCAATAATGGAACACTGGGCACATGGGAGTTATTTATATCCGCCATGAAAATCAGCTaGCCCCCTTTAATGTGCAGT +
Preference number: 5 (lower is better)
Translates to: MAHCSNNGTLGTWELFISAMKIS*PPLMCS
Trigger: ACTGCACATTAAAGGGGGCAAGCTGATTTTCATGGC...GGATATAAATAACTCCCATGTGCCCAGTGTTCCATTATTGGAACAGTGTGCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CAA 90 bp TCTCATATAGTGGGTACCCCAAACTCACTAAAGGCAAAGCTTAAGCAACCATCCCTTTCCTTCCATGAATaGCCTCCCAGGAGATATATC +
Preference number: 5 (lower is better)
Translates to: SHIVGTPNSLKAKLKQPSLSFHE*PPRRYI
Trigger: GATATATCTCCTGGGAGGCAATTCATGGAAGGAAAG...GGATGGTTGCTTAAGCTTTGCCTTTAGTGAGTTTGGGGTACCCACTATATGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CAA 90 bp GTTATTCCTACGCAGAGGGATAGGATAAAACATGCCTCCCAGAAAGACTGGTCTACAAGGACAGTTCTGTaGGGTAAAATGAGAACGTCA +
Preference number: 5 (lower is better)
Translates to: VIPTQRDRIKHASQKDWSTRTVL*GKMRTS
Trigger: TGACGTTCTCATTTTACCCAACAGAACTGTCCTTGT...AGACCAGTCTTTCTGGGAGGCATGTTTTATCCTATCCCTCTGCGTAGGAATAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp GCCAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATATTTACCTGGTTCACTTaGATTCCCGCCACCCAAATG +
Preference number: 5 (lower is better)
Translates to: AKIPCHMLEPGKLLKMFIFTWFT*IPATQM
Trigger: CATTTGGGTGGCGGGAATCAAAGTGAACCAGGTAAA...TATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp CCCGTACAAATGTGTGAATTTGGTGAAATTGCCTTTAACAACCTTACCAAATGTGATCCTGCCACAACGTaGCCATGGAGGTTGATGTCC +
Preference number: 5 (lower is better)
Translates to: PVQMCEFGEIAFNNLTKCDPATT*PWRLMS
Trigger: GGACATCAACCTCCATGGCAACGTTGTGGCAGGATC...ACATTTGGTAAGGTTGTTAAAGGCAATTTCACCAAATTCACACATTTGTACGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp CCTTCTATAAAAGAAGCTCAAAGCATTGTGGGTGGTCAATCCAGAGAATGCTTAGAAGGCCATGAAGACTaGAATGCGCCACATTGTCAG +
Preference number: 5 (lower is better)
Translates to: PSIKEAQSIVGGQSRECLEGHED*NAPHCQ
Trigger: CTGACAATGTGGCGCATTCAAGTCTTCATGGCCTTC...TAAGCATTCTCTGGATTGACCACCCACAATGCTTTGAGCTTCTTTTATAGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp CATTCTGGCTGCCATCAATCTCCTCCCAGTCCTCAATCAATTTCTTCTCAATTTAGGGAGCTCTATCTGTaGATGTCAAGTTGGCTGAGT +
Preference number: 5 (lower is better)
Translates to: HSGCHQSPPSPQSISSQFRELYL*MSSWLS
Trigger: ACTCAGCCAACTTGACATCAACAGATAGAGCTCCCT...AAATTGAGAAGAAATTGATTGAGGACTGGGAGGAGATTGATGGCAGCCAGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CAA 90 bp ATAGTGGGTACCCCAAACTCACTAAAGGCAAAGCTTAAGCAACCATCCTCTTCTCACTGTTCTCTGCATTaGGTAGAATGCAGACATCCA +
Preference number: 5 (lower is better)
Translates to: IVGTPNSLKAKLKQPSSSHCSLH*VECRHP
Trigger: TGGATGTCTGCATTCTACCAAATGCAGAGAACAGTG...AGAAGAGGATGGTTGCTTAAGCTTTGCCTTTAGTGAGTTTGGGGTACCCACTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CAA 90 bp TCCATTCCCAAAGATATCCTGACTACGGACAATGGTGTCACTGTTGACACCCTCGATATTTTCTTGGACTaGCACAGTCTAATTCAGGAC +
Preference number: 5 (lower is better)
Translates to: SIPKDILTTDNGVTVDTLDIFLD*HSLIQD
Trigger: GTCCTGAATTAGACTGTGCAAGTCCAAGAAAATATC...GAGGGTGTCAACAGTGACACCATTGTCCGTAGTCAGGATATCTTTGGGAATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CAA 90 bp TCCCCCATATCTGCTACTGGAACTTCCATTCCCAAAGATATCCTGACTACGGACCTCTTTTGTATTTCTTaGATCTGTACCATCCTCTCC +
Preference number: 5 (lower is better)
Translates to: SPISATGTSIPKDILTTDLFCIS*ICTILS
Trigger: GGAGAGGATGGTACAGATCAAAGAAATACAAAAGAG...GTCCGTAGTCAGGATATCTTTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CAA 90 bp ATGCCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATTCAGACTTGGTCAGTCTGTTaGCAGATGAATCCTTGCATC +
Preference number: 5 (lower is better)
Translates to: MPCRHNSCLPVLLIELIQTWSVC*QMNPCI
Trigger: GATGCAAGGATTCATCTGCAAACAGACTGACCAAGT...CTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp GTTATTCCTACGCAGAGGGATAGGATAAAACATGCCTCCCAGAAAGACTGGTCTAATTGCGCTTTCTTTTaGCTCTACTGTCAGCAATGG +
Preference number: 5 (lower is better)
Translates to: VIPTQRDRIKHASQKDWSNCAFF*LYCQQW
Trigger: CCATTGCTGACAGTAGAGCAAAAAGAAAGCGCAATT...AGACCAGTCTTTCTGGGAGGCATGTTTTATCCTATCCCTCTGCGTAGGAATAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp GATGTTTATAGCTGCTATTTAGGCCCAAAGAGTCAATTCTGGCCTCAGGGATCACATGAGAGGCCTACGTaGACCAACTCTTCTATAATG +
Preference number: 5 (lower is better)
Translates to: DVYSCYLGPKSQFWPQGSHERPT*TNSSIM
Trigger: CATTATAGAAGAGTTGGTCAACGTAGGCCTCTCATG...TGATCCCTGAGGCCAGAATTGACTCTTTGGGCCTAAATAGCAGCTATAAACATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp AGCCTGAAGATCTGCAATACTCACCAGATGCCTAAAGAAGAGGTTAAAACATTTCCAGGGAAGCTGAAATaGTCCATGGCTCTGAAGGAG +
Preference number: 5 (lower is better)
Translates to: SLKICNTHQMPKEEVKTFPGKLK*SMALKE
Trigger: CTCCTTCAGAGCCATGGACAATTTCAGCTTCCCTGG...AAATGTTTTAACCTCTTCTTTAGGCATCTGGTGAGTATTGCAGATCTTCAGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp CCCGTACAAATGTGTGAATTTGGTGAAATTGCCTTTAACAACCTTACCAAATGTAGCATGGCAGCCAGCTaGTGCCTCCAGAGTAAACGT +
Preference number: 5 (lower is better)
Translates to: PVQMCEFGEIAFNNLTKCSMAAS*CLQSKR
Trigger: ACGTTTACTCTGGAGGCACAAGCTGGCTGCCATGCT...ACATTTGGTAAGGTTGTTAAAGGCAATTTCACCAAATTCACACATTTGTACGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS TCA 90 bp TCAACATTTCAGGATTGGAGAGTCCCTCGGCACCAGAAACCTGGATaGTCACGTTGTTTCTTATTATATTTCCATGTCCTGACCAGTCAT +
Preference number: 5 (lower is better)
Translates to: STFQDWRVPRHQKPG*SRCFLLYFHVLTSH
Trigger: ATGACTGGTCAGGACATGGAAATATAATAAGAAACAACGTGATCATCCAGGTTTCTGGTGCCGAGGGACTCTCCAATCCTGAAATGTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS TCA 90 bp GTATTACTATTTCCCAGCCTTTTTCTAAGACTGAAACCATCACAGTaGGGGCCAAGTGAATGGAAACACCTGAGCGTATTTCAATGGGCT +
Preference number: 5 (lower is better)
Translates to: VLLFPSLFLRLKPSQ*GPSEWKHLSVFQWA
Trigger: AGCCCATTGAAATACGCTCAGGTGTTTCCATTCACTTGGCCCTCACTGTGATGGTTTCAGTCTTAGAAAAAGGCTGGGAAATAGTAATAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS TCA 90 bp CTGTCAGCAATGGCCTTTAAGGTCTCTTCATGGCCAGGCATCTCGTaGATAAACCTGATTTGGTTTTGGCCAATCTGTAAGAAGTTAGTT +
Preference number: 5 (lower is better)
Translates to: LSAMAFKVSSWPGIS*INLIWFWPICKKLV
Trigger: AACTAACTTCTTACAGATTGGCCAAAACCAAATCAGGTTTATTCACGAGATGCCTGGCCATGAAGAGACCTTAAAGGCCATTGCTGACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp GACATGAATGAACATAGAGCTGCTCTCTTTGCTTTTGGTGTTTCCCTAATTCTCAACCCATTTGTCTCCTaGAGCTTCCAAGATCACTGG +
Preference number: 5 (lower is better)
Translates to: DMNEHRAALFAFGVSLILNPFVS*SFQDHW
Trigger: CCAGTGATCTTGGAAGCTCAAGGAGACAAATGGGTT...GAGAATTAGGGAAACACCAAAAGCAAAGAGAGCAGCTCTATGTTCATTCATGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp AGCCTGAAGATCTGCAATACTCACCAGATGCCTAAAGAAGAGGTTAAAACATTTCTCCTCAATGGTTGTTaGAATCAGATGGGCTGTGGC +
Preference number: 5 (lower is better)
Translates to: SLKICNTHQMPKEEVKTFLLNGC*NQMGCG
Trigger: GCCACAGCCCATCTGATTCAAACAACCATTGAGGAG...AAATGTTTTAACCTCTTCTTTAGGCATCTGGTGAGTATTGCAGATCTTCAGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp ATAGTGGGTACCCCAAACTCACTAAAGGCAAAGCTTAAGCAACCATCCTCTTCTCAAAGGGGTTCCAGTTaGCATTTTACTGCAAGTAAC +
Preference number: 5 (lower is better)
Translates to: IVGTPNSLKAKLKQPSSSQRGSS*HFTASN
Trigger: GTTACTTGCAGTAAAATGCAAACTGGAACCCCTTTG...AGAAGAGGATGGTTGCTTAAGCTTTGCCTTTAGTGAGTTTGGGGTACCCACTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CAA 90 bp TTGAGGGTCAATAAGGCTCTGGGGGAACCAATTCCTCAAATCACACTGTATCTGATCATCTTCAGGATCTaGTTCATGTGGCCTTTGTAT +
Preference number: 5 (lower is better)
Translates to: LRVNKALGEPIPQITLYLIIFRI*FMWPLY
Trigger: ATACAAAGGCCACATGAACAAGATCCTGAAGATGAT...CAGATACAGTGTGATTTGAGGAATTGGTTCCCCCAGAGCCTTATTGACCCTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CAA 90 bp GATGTTTATAGCTGCTATTTAGGCCCAAAGAGTCAATTCTGGCCTCAGGGATCAACTTTGCAACTCGTTTaGTTCACTGTAACCTGCAAG +
Preference number: 5 (lower is better)
Translates to: DVYSCYLGPKSQFWPQGSTLQLV*FTVTCK
Trigger: CTTGCAGGTTACAGTGAACAAAACGAGTTGCAAAGT...TGATCCCTGAGGCCAGAATTGACTCTTTGGGCCTAAATAGCAGCTATAAACATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp AGCCTGAAGATCTGCAATACTCACCAGATGCCTAAAGAAGAGGTTAAAACATTTAGAAGGATGACTGAGTaGGAGAGGTTACTTCCTCCC +
Preference number: 5 (lower is better)
Translates to: SLKICNTHQMPKEEVKTFRRMTE*ERLLPP
Trigger: GGGAGGAAGTAACCTCTCCAACTCAGTCATCCTTCT...AAATGTTTTAACCTCTTCTTTAGGCATCTGGTGAGTATTGCAGATCTTCAGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp TTCAACACCACCAATTTAATATCTGAATTGCTCCTCTCTCATATAGTGGGTACCAGGGAAAGAAGGGAGTaGAGTAGGAACTCCCGTAGA +
Preference number: 5 (lower is better)
Translates to: FNTTNLISELLLSHIVGTRERRE*SRNSRR
Trigger: TCTACGGGAGTTCCTACTCAACTCCCTTCTTTCCCT...GGTACCCACTATATGAGAGAGGAGCAATTCAGATATTAAATTGGTGGTGTTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CAA 90 bp CCTTCTATAAAAGAAGCTCAAAGCATTGTGGGTGGTCAATCCAGAGAATGCTTAATGCTTATGGAAGGCTaGCCCCAAGACTTGAAACTG +
Preference number: 5 (lower is better)
Translates to: PSIKEAQSIVGGQSRECLMLMEG*PQDLKL
Trigger: CAGTTTCAAGTCTTGGGGCAAGCCTTCCATAAGCAT...TAAGCATTCTCTGGATTGACCACCCACAATGCTTTGAGCTTCTTTTATAGAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp TCCCCCATATCTGCTACTGGAACTTCCATTCCCAAAGATATCCTGACTACGGACTTTTTCAGGCGAAGATaGCTACTTCTAAAAATCTGG +
Preference number: 5 (lower is better)
Translates to: SPISATGTSIPKDILTTDFFRRR*LLLKIW
Trigger: CCAGATTTTTAGAAGTAGCAATCTTCGCCTGAAAAA...GTCCGTAGTCAGGATATCTTTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CAA 90 bp CCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATTCAGGGCCTAATGGCCACACAGTaGATGAGATCAAAATTAACA +
Preference number: 5 (lower is better)
Translates to: PCRHNSCLPVLLIELIQGLMATQ*MRSKLT
Trigger: TGTTAATTTTGATCTCATCAACTGTGTGGCCATTAG...GCCCTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp ATAGTGGGTACCCCAAACTCACTAAAGGCAAAGCTTAAGCAACCATCCTCTTCTCGACCAAAGCTTGAATaGACCAAACAAGAAGCTGAA +
Preference number: 5 (lower is better)
Translates to: IVGTPNSLKAKLKQPSSSRPKLE*TKQEAE
Trigger: TTCAGCTTCTTGTTTGGTCAATTCAAGCTTTGGTCG...AGAAGAGGATGGTTGCTTAAGCTTTGCCTTTAGTGAGTTTGGGGTACCCACTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CAA 90 bp ATGCCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATTCAGTACTGCAGAGATCTGTaGATCCAAAGGTTCTCAGAT +
Preference number: 5 (lower is better)
Translates to: MPCRHNSCLPVLLIELIQYCRDL*IQRFSD
Trigger: ATCTGAGAACCTTTGGATCAACAGATCTCTGCAGTA...CTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp CCCGTACAAATGTGTGAATTTGGTGAAATTGCCTTTAACAACCTTACCAAATGTGCCACACTCAGAACATaGCTTCTGTCCACAGGGAAG +
Preference number: 5 (lower is better)
Translates to: PVQMCEFGEIAFNNLTKCATLRT*LLSTGK
Trigger: CTTCCCTGTGGACAGAAGCAATGTTCTGAGTGTGGC...ACATTTGGTAAGGTTGTTAAAGGCAATTTCACCAAATTCACACATTTGTACGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp CTTCTTTCCTACTCCCCCATATCTGCTACTGGAACTTCCATTCCCAAAGATATCTACGTCAGGCTGAATTaGTATATTTCGGGTCAACAG +
Preference number: 5 (lower is better)
Translates to: LLSYSPISATGTSIPKDIYVRLN*YISGQQ
Trigger: CTGTTGACCCGAAATATACAAATTCAGCCTGACGTA...GATATCTTTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGAGTAGGAAAGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CAA 90 bp GTTATTCCTACGCAGAGGGATAGGATAAAACATGCCTCCCAGAAAGACTGGTCTGATATTTTCTTGGACTaGCACAGTCTAATTCAGGAC +
Preference number: 5 (lower is better)
Translates to: VIPTQRDRIKHASQKDWSDIFLD*HSLIQD
Trigger: GTCCTGAATTAGACTGTGCAAGTCCAAGAAAATATC...AGACCAGTCTTTCTGGGAGGCATGTTTTATCCTATCCCTCTGCGTAGGAATAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp CCCTGCAGACATAACAGCTGTCTGCCAGTACTTCTCATAGAACTAATTCAGGGCTCCTTGCATCAGAAATaGGTATGTACATTTCTGTTC +
Preference number: 5 (lower is better)
Translates to: PCRHNSCLPVLLIELIQGSLHQK*VCTFLF
Trigger: GAACAGAAATGTACATACCAATTTCTGATGCAAGGA...GCCCTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp GCCAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATAGATATAACTTCTGAATaGCCCAAATGGCATCAGCGC +
Preference number: 5 (lower is better)
Translates to: AKIPCHMLEPGKLLKMFIDITSE*PKWHQR
Trigger: GCGCTGATGCCATTTGGGCAATTCAGAAGTTATATC...TATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp GATGTTTATAGCTGCTATTTAGGCCCAAAGAGTCAATTCTGGCCTCAGGGATCACCAAAAAGCAGCTTTTaGATAAAGGACTTGGCCACT +
Preference number: 5 (lower is better)
Translates to: DVYSCYLGPKSQFWPQGSPKSSF*IKDLAT
Trigger: AGTGGCCAAGTCCTTTATCAAAAAGCTGCTTTTTGG...TGATCCCTGAGGCCAGAATTGACTCTTTGGGCCTAAATAGCAGCTATAAACATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp CAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATAGCGAGAGCAATCTCTTTTaGGAAGCTCTCCACATTCCT +
Preference number: 5 (lower is better)
Translates to: QNSMPHARAWQVTEDVYSESNLF*EALHIP
Trigger: AGGAATGTGGAGAGCTTCCAAAAAGAGATTGCTCTC...GCTATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp TCCTGCGATCTTTTCTTTACATGCTTGGAGCATAAGGCCTTCTGGATCCAGAGCTCGTTTTTAATTCTGTaGGTGCCCAAGCAAAATACA +
Preference number: 5 (lower is better)
Translates to: SCDLFFTCLEHKAFWIQSSFLIL*VPKQNT
Trigger: TGTATTTTGCTTGGGCACCAACAGAATTAAAAACGA...GCTCTGGATCCAGAAGGCCTTATGCTCCAAGCATGTAAAGAAAAGATCGCAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp GTTATTCCTACGCAGAGGGATAGGATAAAACATGCCTCCCAGAAAGACTGGTCTGATAAAGGGTGTAGATaGTCACTGCTGGGAAATATT +
Preference number: 5 (lower is better)
Translates to: VIPTQRDRIKHASQKDWSDKGCR*SLLGNI
Trigger: AATATTTCCCAGCAGTGACAATCTACACCCTTTATC...AGACCAGTCTTTCTGGGAGGCATGTTTTATCCTATCCCTCTGCGTAGGAATAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp CCTTCTATAAAAGAAGCTCAAAGCATTGTGGGTGGTCAATCCAGAGAATGCTTAACAAGGGCAAGTCTATaGAAGGGCAAGTTCACCTTG +
Preference number: 5 (lower is better)
Translates to: PSIKEAQSIVGGQSRECLTRASL*KGKFTL
Trigger: CAAGGTGAACTTGCCCTTCAATAGACTTGCCCTTGT...TAAGCATTCTCTGGATTGACCACCCACAATGCTTTGAGCTTCTTTTATAGAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS TCA 90 bp TCCAGTCACAGGTGGTATTCTTTACCATGTTTTGAAAGCCGATTGTaGAGGACACAATCATCTTCAGGATCTTGTTCATGTGGCCTTTGT +
Preference number: 5 (lower is better)
Translates to: SSHRWYSLPCFESRL*RTQSSSGSCSCGLC
Trigger: ACAAAGGCCACATGAACAAGATCCTGAAGATGATTGTGTCCTTCACAATCGGCTTTCAAAACATGGTAAAGAATACCACCTGTGACTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS TCA 90 bp TTGACCAAACAAGAAGCTGAAAGGGTTTCCATAGAAGCAAGAATGTaGCTTCTGTTTTTCCCAGACAGAGACCCATCCAAGTCTTCCAAA +
Preference number: 5 (lower is better)
Translates to: LTKQEAERVSIEARM*LLFFPDRDPSKSSK
Trigger: TTTGGAAGACTTGGATGGGTCTCTGTCTGGGAAAAACAGAAGTCACATTCTTGCTTCTATGGAAACCCTTTCAGCTTCTTGTTTGGTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS TCA 90 bp ATTGACTCCTGGAGGAGAAGTGACAGTAAAAATAAAGTGCCAGTTTaGCCCAGAGATCAAGACTGCCAAGTTGTAGAAGCTAACATAACC +
Preference number: 5 (lower is better)
Translates to: IDSWRRSDSKNKVPV*PRDQDCQVVEANIT
Trigger: GGTTATGTTAGCTTCTACAACTTGGCAGTCTTGATCTCTGGGTCAAACTGGCACTTTATTTTTACTGTCACTTCTCCTCCAGGAGTCAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS CCA 90 bp GGAAATGGAAATGCCACTAAGTTTGAAGAGTTTGTAAACTTCAACTaGCTGGTCTTCACAGTAAATCCACCTTGTCCTTGGGAACAGTCT +
Preference number: 5 (lower is better)
Translates to: GNGNATKFEEFVNFN*LVFTVNPPCPWEQS
Trigger: AGACTGTTCCCAAGGACAAGGTGGATTTACTGTGAAGACCAGCCAGTTGAAGTTTACAAACTCTTCAAACTTAGTGGCATTTCCATTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS-3UTR CAA 90 bp ACACTGGGCACATGGGAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGAGAAAGTGTAATTATTaGTCTCTGGAGCCACAAAGA +
Preference number: 5 (lower is better)
Translates to: TLGTWELFISYCLRSWPRRKCNY*SLEPQR
Trigger: TCTTTGTGGCTCCAGAGACAAATAATTACACTTTCT...CCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTCCCATGTGCCCAGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CAA 90 bp CCTTCTATAAAAGAAGCTCAAAGCATTGTGGGTGGTCAATCCAGAGAATGCTTATTGTTCATGTGGCCTTaGTATGCAAGACACAGGTGT +
Preference number: 5 (lower is better)
Translates to: PSIKEAQSIVGGQSRECLLFMWP*YARHRC
Trigger: ACACCTGTGTCTTGCATACAAAGGCCACATGAACAA...TAAGCATTCTCTGGATTGACCACCCACAATGCTTTGAGCTTCTTTTATAGAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp ATAGTGGGTACCCCAAACTCACTAAAGGCAAAGCTTAAGCAACCATCCTCTTCTTTAATGTGCAGTAAGTaGAGGATGCTTGTGTTAGTG +
Preference number: 5 (lower is better)
Translates to: IVGTPNSLKAKLKQPSSSLMCSK*RMLVLV
Trigger: CACTAACACAAGCATCCTCAACTTACTGCACATTAA...AGAAGAGGATGGTTGCTTAAGCTTTGCCTTTAGTGAGTTTGGGGTACCCACTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CAA 90 bp TCACTTCCCCAGCTTATTATCCAGAAATACTGGGAACATTCTGCCTTTCAGGCCATTAGTGAGATTTCCTaGTATGGTAATACTCCTGCT +
Preference number: 5 (lower is better)
Translates to: SLPQLIIQKYWEHSAFQAISEIS*YGNTPA
Trigger: AGCAGGAGTATTACCATACAAGGAAATCTCACTAAT...GGCCTGAAAGGCAGAATGTTCCCAGTATTTCTGGATAATAAGCTGGGGAAGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp ACACTGGGCACATGGGAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGCTAATGGCCACACAGTaGATGAGATCAAAATTAACA +
Preference number: 5 (lower is better)
Translates to: TLGTWELFISYCLRSWPRLMATQ*MRSKLT
Trigger: TGTTAATTTTGATCTCATCAACTGTGTGGCCATTAG...CCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTCCCATGTGCCCAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CAA 90 bp CAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATAGCCGACCAAAGCTTGAATaGACCAAACAAGAAGCTGAA +
Preference number: 5 (lower is better)
Translates to: QNSMPHARAWQVTEDVYSRPKLE*TKQEAE
Trigger: TTCAGCTTCTTGTTTGGTCAATTCAAGCTTTGGTCG...GCTATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp CATTCTGGCTGCCATCAATCTCCTCCCAGTCCTCAATCAATTTCTTCTCAATTTGAGATTCTGGTACAGTaGTCAAGTCCACTTTCCTTA +
Preference number: 5 (lower is better)
Translates to: HSGCHQSPPSPQSISSQFEILVQ*SSPLSL
Trigger: TAAGGAAAGTGGACTTGACAACTGTACCAGAATCTC...AAATTGAGAAGAAATTGATTGAGGACTGGGAGGAGATTGATGGCAGCCAGAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CAA 90 bp CTTCTTTCCTACTCCCCCATATCTGCTACTGGAACTTCCATTCCCAAAGATATCACAATCTGCACTTTTTaGACGGAATTTTGTGGAGCA +
Preference number: 5 (lower is better)
Translates to: LLSYSPISATGTSIPKDITICTF*TEFCGA
Trigger: TGCTCCACAAAATTCCGTCAAAAAAGTGCAGATTGT...GATATCTTTGGGAATGGAAGTTCCAGTAGCAGATATGGGGGAGTAGGAAAGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CAA 90 bp GCCAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATACTCCCATCCAGATCCTaGAAGAGATATTTTCTTGGA +
Preference number: 5 (lower is better)
Translates to: AKIPCHMLEPGKLLKMFILPSRS*KRYFLG
Trigger: TCCAAGAAAATATCTCTTCAAGGATCTGGATGGGAG...TATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp GCCAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATAAAGACAGCAAATGGCTaGGATCGAGCTGTAAAATTG +
Preference number: 5 (lower is better)
Translates to: AKIPCHMLEPGKLLKMFIKTANG*DRAVKL
Trigger: CAATTTTACAGCTCGATCCAAGCCATTTGCTGTCTT...TATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp CCTTCTATAAAAGAAGCTCAAAGCATTGTGGGTGGTCAATCCAGAGAATGCTTACTTTTCTTTACATGCTaGGAGCATAAGGCCTTCTGG +
Preference number: 5 (lower is better)
Translates to: PSIKEAQSIVGGQSRECLLFFTC*EHKAFW
Trigger: CCAGAAGGCCTTATGCTCCAAGCATGTAAAGAAAAG...TAAGCATTCTCTGGATTGACCACCCACAATGCTTTGAGCTTCTTTTATAGAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS TCA 90 bp ACCAACATCAAGATCCGATGCATTCCAACAGGTAGCAAATCTGTCTaGCAGACTACATTGGTCTGGTTTGAGAAAATAACTTTGCAACTC +
Preference number: 5 (lower is better)
Translates to: TNIKIRCIPTGSKSV*QTTLVWFEKITLQL
Trigger: GAGTTGCAAAGTTATTTTCTCAAACCAGACCAATGTAGTCTGTCAGACAGATTTGCTACCTGTTGGAATGCATCGGATCTTGATGTTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS GCA 90 bp TTATCTTTTATCTTTAGCATCCTGGTCCTCTCTGCTGTTATTGGGTaGATAATTCCACTGTTCTCTGCATTTGGTAGAATGCAGACATCC +
Preference number: 5 (lower is better)
Translates to: LSFIFSILVLSAVIG*IIPLFSAFGRMQTS
Trigger: GGATGTCTGCATTCTACCAAATGCAGAGAACAGTGGAATTATGCACCCAATAACAGCAGAGAGGACCAGGATGCTAAAGATAAAAGATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS-3UTR CAA 90 bp GAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGTCTGATTTTGCAATTGAAATGCAAGGAAGCTaGGCTATCTGCCTGAATCCA +
Preference number: 5 (lower is better)
Translates to: ELFISYCLRSWPRSDFAIEMQGS*AICLNP
Trigger: TGGATTCAGGCAGATAGCCAAGCTTCCTTGCATTTC...AATTGCAAAATCAGACCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CAA 90 bp GACATGAATGAACATAGAGCTGCTCTCTTTGCTTTTGGTGTTTCCCTAATTCTCCAAAGGGGTTCCAGTTaGCATTTTACTGCAAGTAAC +
Preference number: 5 (lower is better)
Translates to: DMNEHRAALFAFGVSLILQRGSS*HFTASN
Trigger: GTTACTTGCAGTAAAATGCAAACTGGAACCCCTTTG...GAGAATTAGGGAAACACCAAAAGCAAAGAGAGCAGCTCTATGTTCATTCATGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp GATGTTTATAGCTGCTATTTAGGCCCAAAGAGTCAATTCTGGCCTCAGGGATCATACATTGCAAGGAAGTaGATCATCCACAAATACCAT +
Preference number: 5 (lower is better)
Translates to: DVYSCYLGPKSQFWPQGSYIARK*IIHKYH
Trigger: ATGGTATTTGTGGATGATCAACTTCCTTGCAATGTA...TGATCCCTGAGGCCAGAATTGACTCTTTGGGCCTAAATAGCAGCTATAAACATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp GAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGTCTGATTTTGCAATTTGGCACAAAGAGGCATaGGGAACTTTCCTCGCAAAT +
Preference number: 5 (lower is better)
Translates to: ELFISYCLRSWPRSDFAIWHKEA*GTFLAN
Trigger: ATTTGCGAGGAAAGTTCCCAATGCCTCTTTGTGCCA...AATTGCAAAATCAGACCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CAA 90 bp CAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATAGCTTAATGTGCAGTAAGTaGAGGATGCTTGTGTTAGTG +
Preference number: 5 (lower is better)
Translates to: QNSMPHARAWQVTEDVYSLMCSK*RMLVLV
Trigger: CACTAACACAAGCATCCTCAACTTACTGCACATTAA...GCTATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp TGGGAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGTCTGATTTTGCACCAAGTCTTCCAAAATaGCTGCATGAGGAAATGGAA +
Preference number: 5 (lower is better)
Translates to: WELFISYCLRSWPRSDFAPSLPK*LHEEME
Trigger: TTCCATTTCCTCATGCAGCAATTTTGGAAGACTTGG...TGCAAAATCAGACCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CAA 90 bp CATTCTGGCTGCCATCAATCTCCTCCCAGTCCTCAATCAATTTCTTCTCAATTTATCACATACAGCCCTTaGAAGAATGGAAGATCTGTA +
Preference number: 5 (lower is better)
Translates to: HSGCHQSPPSPQSISSQFITYSP*KNGRSV
Trigger: TACAGATCTTCCATTCTTCAAAGGGCTGTATGTGAT...AAATTGAGAAGAAATTGATTGAGGACTGGGAGGAGATTGATGGCAGCCAGAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CAA 90 bp GACATGAATGAACATAGAGCTGCTCTCTTTGCTTTTGGTGTTTCCCTAATTCTCTCCCATAAACCCCAATaGTTCCTGGGTCAATATGAA +
Preference number: 5 (lower is better)
Translates to: DMNEHRAALFAFGVSLILSHKPQ*FLGQYE
Trigger: TTCATATTGACCCAGGAACAATTGGGGTTTATGGGA...GAGAATTAGGGAAACACCAAAAGCAAAGAGAGCAGCTCTATGTTCATTCATGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp CCCGTACAAATGTGTGAATTTGGTGAAATTGCCTTTAACAACCTTACCAAATGTCTTGAATGCGCCACATaGTCAGACCAAAGCAGTTCA +
Preference number: 5 (lower is better)
Translates to: PVQMCEFGEIAFNNLTKCLECAT*SDQSSS
Trigger: TGAACTGCTTTGGTCTGACAATGTGGCGCATTCAAG...ACATTTGGTAAGGTTGTTAAAGGCAATTTCACCAAATTCACACATTTGTACGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp TGGGAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGTCTGATTTTGCACTCCCATCCAGATCCTaGAAGAGATATTTTCTTGGA +
Preference number: 5 (lower is better)
Translates to: WELFISYCLRSWPRSDFALPSRS*KRYFLG
Trigger: TCCAAGAAAATATCTCTTCAAGGATCTGGATGGGAG...TGCAAAATCAGACCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CAA 90 bp GCCAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATAAACAAGTGCCATTATTaGCCTAGCATTGAACTAGGA +
Preference number: 5 (lower is better)
Translates to: AKIPCHMLEPGKLLKMFINKCHY*PSIELG
Trigger: TCCTAGTTCAATGCTAGGCAAATAATGGCACTTGTT...TATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp CCTTCTATAAAAGAAGCTCAAAGCATTGTGGGTGGTCAATCCAGAGAATGCTTATTTTTGATAAAGGACTaGGCCACTTGGCTTTCTCTG +
Preference number: 5 (lower is better)
Translates to: PSIKEAQSIVGGQSRECLFLIKD*ATWLSL
Trigger: CAGAGAAAGCCAAGTGGCCAAGTCCTTTATCAAAAA...TAAGCATTCTCTGGATTGACCACCCACAATGCTTTGAGCTTCTTTTATAGAAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS TCA 90 bp ACATCAACAAAACCACTAGTCACAGATACAACTGGATATAACTTCTaGATTGCCCAAATGGCATCAGCGCTATCAAGAATTAGGACCACT +
Preference number: 5 (lower is better)
Translates to: TSTKPLVTDTTGYNF*IAQMASALSRIRTT
Trigger: AGTGGTCCTAATTCTTGATAGCGCTGATGCCATTTGGGCAATTCAGAAGTTATATCCAGTTGTATCTGTGACTAGTGGTTTTGTTGATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp GAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGTCTGATTTTGCAATTTGCGCCTTGGAAAACTaGAAAGTACAGCTATCTCGT +
Preference number: 5 (lower is better)
Translates to: ELFISYCLRSWPRSDFAICALEN*KVQLSR
Trigger: ACGAGATAGCTGTACTTTCAAGTTTTCCAAGGCGCA...AATTGCAAAATCAGACCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CAA 90 bp GCCAAAATTCCATGCCACATGCTAGAGCCTGGCAAGTTACTGAAGATGTTTATAATTCTTTACCATGTTTaGAAAGCCGATTGTGAAGGA +
Preference number: 5 (lower is better)
Translates to: AKIPCHMLEPGKLLKMFIILYHV*KADCEG
Trigger: TCCTTCACAATCGGCTTTCAAAACATGGTAAAGAAT...TATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGGAATTTTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp CATTCTGGCTGCCATCAATCTCCTCCCAGTCCTCAATCAATTTCTTCTCAATTTTACATTGCAAGGAAGTaGATCATCCACAAATACCAT +
Preference number: 5 (lower is better)
Translates to: HSGCHQSPPSPQSISSQFYIARK*IIHKYH
Trigger: ATGGTATTTGTGGATGATCAACTTCCTTGCAATGTA...AAATTGAGAAGAAATTGATTGAGGACTGGGAGGAGATTGATGGCAGCCAGAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CAA 90 bp CATTCTGGCTGCCATCAATCTCCTCCCAGTCCTCAATCAATTTCTTCTCAATTTATTAGTGAGATTTCCTaGTATGGTAATACTCCTGCT +
Preference number: 5 (lower is better)
Translates to: HSGCHQSPPSPQSISSQFISEIS*YGNTPA
Trigger: AGCAGGAGTATTACCATACAAGGAAATCTCACTAAT...AAATTGAGAAGAAATTGATTGAGGACTGGGAGGAGATTGATGGCAGCCAGAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CAA 90 bp CCCGTACAAATGTGTGAATTTGGTGAAATTGCCTTTAACAACCTTACCAAATGTCTTTCCTTCCATGAATaGCCTCCCAGGAGATATATC +
Preference number: 5 (lower is better)
Translates to: PVQMCEFGEIAFNNLTKCLSFHE*PPRRYI
Trigger: GATATATCTCCTGGGAGGCAATTCATGGAAGGAAAG...ACATTTGGTAAGGTTGTTAAAGGCAATTTCACCAAATTCACACATTTGTACGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp AGCCTGAAGATCTGCAATACTCACCAGATGCCTAAAGAAGAGGTTAAAACATTTCCAAGTCTTCCAAAATaGCTGCATGAGGAAATGGAA +
Preference number: 5 (lower is better)
Translates to: SLKICNTHQMPKEEVKTFPSLPK*LHEEME
Trigger: TTCCATTTCCTCATGCAGCAATTTTGGAAGACTTGG...AAATGTTTTAACCTCTTCTTTAGGCATCTGGTGAGTATTGCAGATCTTCAGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp TTCAACACCACCAATTTAATATCTGAATTGCTCCTCTCTCATATAGTGGGTACCTACTGCAGAGATCTGTaGATCCAAAGGTTCTCAGAT +
Preference number: 5 (lower is better)
Translates to: FNTTNLISELLLSHIVGTYCRDL*IQRFSD
Trigger: ATCTGAGAACCTTTGGATCAACAGATCTCTGCAGTA...GGTACCCACTATATGAGAGAGGAGCAATTCAGATATTAAATTGGTGGTGTTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CAA 90 bp GACATGAATGAACATAGAGCTGCTCTCTTTGCTTTTGGTGTTTCCCTAATTCTCATCACATACAGCCCTTaGAAGAATGGAAGATCTGTA +
Preference number: 5 (lower is better)
Translates to: DMNEHRAALFAFGVSLILITYSP*KNGRSV
Trigger: TACAGATCTTCCATTCTTCAAAGGGCTGTATGTGAT...GAGAATTAGGGAAACACCAAAAGCAAAGAGAGCAGCTCTATGTTCATTCATGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp TTCAACACCACCAATTTAATATCTGAATTGCTCCTCTCTCATATAGTGGGTACCTCCCATAAACCCCAATaGTTCCTGGGTCAATATGAA +
Preference number: 5 (lower is better)
Translates to: FNTTNLISELLLSHIVGTSHKPQ*FLGQYE
Trigger: TTCATATTGACCCAGGAACAATTGGGGTTTATGGGA...GGTACCCACTATATGAGAGAGGAGCAATTCAGATATTAAATTGGTGGTGTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CAA 90 bp AGCCTGAAGATCTGCAATACTCACCAGATGCCTAAAGAAGAGGTTAAAACATTTGAGATTCTGGTACAGTaGTCAAGTCCACTTTCCTTA +
Preference number: 5 (lower is better)
Translates to: SLKICNTHQMPKEEVKTFEILVQ*SSPLSL
Trigger: TAAGGAAAGTGGACTTGACAACTGTACCAGAATCTC...AAATGTTTTAACCTCTTCTTTAGGCATCTGGTGAGTATTGCAGATCTTCAGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp CCCGTACAAATGTGTGAATTTGGTGAAATTGCCTTTAACAACCTTACCAAATGTCACTGTTCTCTGCATTaGGTAGAATGCAGACATCCA +
Preference number: 5 (lower is better)
Translates to: PVQMCEFGEIAFNNLTKCHCSLH*VECRHP
Trigger: TGGATGTCTGCATTCTACCAAATGCAGAGAACAGTG...ACATTTGGTAAGGTTGTTAAAGGCAATTTCACCAAATTCACACATTTGTACGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp CCCGTACAAATGTGTGAATTTGGTGAAATTGCCTTTAACAACCTTACCAAATGTGTCACAGTAGGGCAATaGCGCTTTCTTTTTGCTCTA +
Preference number: 5 (lower is better)
Translates to: PVQMCEFGEIAFNNLTKCVTVGQ*RFLFAL
Trigger: TAGAGCAAAAAGAAAGCGCAATTGCCCTACTGTGAC...ACATTTGGTAAGGTTGTTAAAGGCAATTTCACCAAATTCACACATTTGTACGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp CCTTCTATAAAAGAAGCTCAAAGCATTGTGGGTGGTCAATCCAGAGAATGCTTAAAAGTATTCTTCAGTTaGAAAAGAAATGGGCCCCGT +
Preference number: 5 (lower is better)
Translates to: PSIKEAQSIVGGQSRECLKVFFS*KRNGPR
Trigger: ACGGGGCCCATTTCTTTTCAAACTGAAGAATACTTT...TAAGCATTCTCTGGATTGACCACCCACAATGCTTTGAGCTTCTTTTATAGAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp AGCCTGAAGATCTGCAATACTCACCAGATGCCTAAAGAAGAGGTTAAAACATTTAGCTTGTCCAATCTCTaGAGAGAAATGAGTCCATCA +
Preference number: 5 (lower is better)
Translates to: SLKICNTHQMPKEEVKTFSLSNL*REMSPS
Trigger: TGATGGACTCATTTCTCTCAAGAGATTGGACAAGCT...AAATGTTTTAACCTCTTCTTTAGGCATCTGGTGAGTATTGCAGATCTTCAGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp CCTTCTATAAAAGAAGCTCAAAGCATTGTGGGTGGTCAATCCAGAGAATGCTTAAGAAAGTGTAATTATTaGTCTCTGGAGCCACAAAGA +
Preference number: 5 (lower is better)
Translates to: PSIKEAQSIVGGQSRECLRKCNY*SLEPQR
Trigger: TCTTTGTGGCTCCAGAGACAAATAATTACACTTTCT...TAAGCATTCTCTGGATTGACCACCCACAATGCTTTGAGCTTCTTTTATAGAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp TGGGAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGTCTGATTTTGCAATTCTTTACCATGTTTaGAAAGCCGATTGTGAAGGA +
Preference number: 5 (lower is better)
Translates to: WELFISYCLRSWPRSDFAILYHV*KADCEG
Trigger: TCCTTCACAATCGGCTTTCAAAACATGGTAAAGAAT...TGCAAAATCAGACCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTCCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CAA 90 bp GAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGTCTGATTTTGCAATTCGTTCCAGAATCAGCTaGAGAAACTGTTACGTTTGT +
Preference number: 5 (lower is better)
Translates to: ELFISYCLRSWPRSDFAIRSRIS*RNCYVC
Trigger: ACAAACGTAACAGTTTCTCAAGCTGATTCTGGAACG...AATTGCAAAATCAGACCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CAA 90 bp GAGTTATTTATATCCTACTGCTTAAGGTCATGGCCAAGGTCTGATTTTGCAATTAGAATGATGGAAACATaGACTCTGCCCAATGATCTG +
Preference number: 5 (lower is better)
Translates to: ELFISYCLRSWPRSDFAIRMMET*TLPNDL
Trigger: CAGATCATTGGGCAGAGTCAATGTTTCCATCATTCT...AATTGCAAAATCAGACCTTGGCCATGACCTTAAGCAGTAGGATATAAATAACTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS-3UTR CAA 90 bp AGCCTGAAGATCTGCAATACTCACCAGATGCCTAAAGAAGAGGTTAAAACATTTACAATCTGCACTTTTTaGACGGAATTTTGTGGAGCA +
Preference number: 5 (lower is better)
Translates to: SLKICNTHQMPKEEVKTFTICTF*TEFCGA
Trigger: TGCTCCACAAAATTCCGTCAAAAAAGTGCAGATTGT...AAATGTTTTAACCTCTTCTTTAGGCATCTGGTGAGTATTGCAGATCTTCAGGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp CCTTCTATAAAAGAAGCTCAAAGCATTGTGGGTGGTCAATCCAGAGAATGCTTATTTGCAGATGAATCCTaGCATCAGAAATTGGTATGT +
Preference number: 5 (lower is better)
Translates to: PSIKEAQSIVGGQSRECLFADES*HQKLVC
Trigger: ACATACCAATTTCTGATGCAAGGATTCATCTGCAAA...TAAGCATTCTCTGGATTGACCACCCACAATGCTTTGAGCTTCTTTTATAGAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp CCCGTACAAATGTGTGAATTTGGTGAAATTGCCTTTAACAACCTTACCAAATGTATCATCTTCAGGATCTaGTTCATGTGGCCTTTGTAT +
Preference number: 5 (lower is better)
Translates to: PVQMCEFGEIAFNNLTKCIIFRI*FMWPLY
Trigger: ATACAAAGGCCACATGAACAAGATCCTGAAGATGAT...ACATTTGGTAAGGTTGTTAAAGGCAATTTCACCAAATTCACACATTTGTACGGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp AGCCTGAAGATCTGCAATACTCACCAGATGCCTAAAGAAGAGGTTAAAACATTTTCCTCATACTCATTTTaGCATATAGTTTGCAGGCAT +
Preference number: 5 (lower is better)
Translates to: SLKICNTHQMPKEEVKTFSSYSF*HIVCRH
Trigger: ATGCCTGCAAACTATATGCAAAAATGAGTATGAGGA...AAATGTTTTAACCTCTTCTTTAGGCATCTGGTGAGTATTGCAGATCTTCAGGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS GCA 90 bp TCAAGAATTAGGACCACTTGGTCAGTCTGTTTGCAGATGAATCCTTaGATCAGAAATTGGTATGTACATTTCTGTTCTTCTCTAAATGTA +
Preference number: 5 (lower is better)
Translates to: SRIRTTWSVCLQMNP*IRNWYVHFCSSLNV
Trigger: TACATTTAGAGAAGAACAGAAATGTACATACCAATTTCTGATGCAAGGATTCATCTGCAAACAGACTGACCAAGTGGTCCTAATTCTTGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS-3UTR CAA 90 bp CCCGTACAAATGTGTGAATTTGGTGAAATTGCCTTTAACAACCTTACCAAATGTTTTTTCAGGCGAAGATaGCTACTTCTAAAAATCTGG +
Preference number: 5 (lower is better)
Translates to: PVQMCEFGEIAFNNLTKCFFRRR*LLLKIW
Trigger: CCAGATTTTTAGAAGTAGCAATCTTCGCCTGAAAAA...ACATTTGGTAAGGTTGTTAAAGGCAATTTCACCAAATTCACACATTTGTACGGG
37% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS CCA 72 bp GCAGCTGGAACAGTGGGAGCGCCCGCATCGGGTATCTaGGGGGCTGGCAGGGTTTCACACCAGATGCTCGCC +
Preference number: 6 (lower is better)
Translates to: AAGTVGAPASGI*GAGRVSHQMLA
Trigger: GGCGAGCATCTGGTGTGAAACCCTGCCAGCCCCCCAGATACCCGATGCGGGCGCTCCCACTGTTCCAGCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS TCA 72 bp GGCAGTGCCACCTCCAGGCCCCAAGCCGACTGTGTGTaGACCGGAGCCAAGGCATCCTGGACGTGGACTTCC +
Preference number: 6 (lower is better)
Translates to: GSATSRPQADCV*TGAKASWTWTS
Trigger: GGAAGTCCACGTCCAGGATGCCTTGGCTCCGGTTCACACACAGTCGGCTTGGGGCCTGGAGGTGGCACTGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CCA 72 bp GAAGAACCTGTTGCCAGCCCAGACCTCCACGGCAGCTaGAACAGTGGGAGCGCCCGCATCGGGTATCTGGGG +
Preference number: 6 (lower is better)
Translates to: EEPVASPDLHGS*NSGSARIGYLG
Trigger: CCCCAGATACCCGATGCGGGCGCTCCCACTGTTCCAGCTGCCGTGGAGGTCTGGGCTGGCAACAGGTTCTTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS TCA 72 bp GACACTGTAGACCGGAGGGGATCCCACCACAGAGACTaGTTCCACCAGATTGCCCCCTGGGCGAGCCGTTCC +
Preference number: 6 (lower is better)
Translates to: DTVDRRGSHHRD*FHQIAPWASRS
Trigger: GGAACGGCTCGCCCAGGGGGCAATCTGGTGGAATCAGTCTCTGTGGTGGGATCCCCTCCGGTCTACAGTGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS GCA 72 bp CCCCGAAGCAACGCACACAAGTCTCCCAGAGGTCAGTaGAATCGAACTGCCAGCTCTCGGGGCTGGTCCTCG +
Preference number: 6 (lower is better)
Translates to: PRSNAHKSPRGQ*NRTASSRGWSS
Trigger: CGAGGACCAGCCCCGAGAGCTGGCAGTTCGATTGCACTGACCTCTGGGAGACTTGTGTGCGTTGCTTCGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS GCA 72 bp GGAAATTCTGTGGAGACCAGCTGGCAGTGGGGGCAGTaGCACCTCCAGGCCCCAAGCCGACTGTGTGTGAAC +
Preference number: 6 (lower is better)
Translates to: GNSVETSWQWGQ*HLQAPSRLCVN
Trigger: GTTCACACACAGTCGGCTTGGGGCCTGGAGGTGGCACTGCCCCCACTGCCAGCTGGTCTCCACAGAATTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS TCA 72 bp TGGTACTCCCCGGCCGGAAGGGAAGGGACCACGCACTaGAGAACGGTGTGGTTACCAGAGACACCCACACAG +
Preference number: 6 (lower is better)
Translates to: WYSPAGREGTTH*RTVWLPETPTQ
Trigger: CTGTGTGGGTGTCTCTGGTAACCACACCGTTCTTCAGTGCGTGGTCCCTTCCCTTCCGGCCGGGGAGTACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CCA 72 bp CCCATTGATAGAGACGGAAATTCTGTGGAGACCAGCTaGCAGTGGGGGCAGTGCCACCTCCAGGCCCCAAGC +
Preference number: 6 (lower is better)
Translates to: PIDRDGNSVETS*QWGQCHLQAPS
Trigger: GCTTGGGGCCTGGAGGTGGCACTGCCCCCACTGCCAGCTGGTCTCCACAGAATTTCCGTCTCTATCAATGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS TCA 72 bp CCAAACCAAAGCTGGGTCCCTGCTGAAGCCTATTCCTaGGATGCTGAGGATGGTCCCTCCCAGCAGGGACCC +
Preference number: 6 (lower is better)
Translates to: PNQSWVPAEAYS*DAEDGPSQQGP
Trigger: GGGTCCCTGCTGGGAGGGACCATCCTCAGCATCTCAGGAATAGGCTTCAGCAGGGACCCAGCTTTGGTTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS GCA 72 bp GAGGGGATCCCACCACAGAGACTGATTCCACCAGATTaGCCCCTGGGCGAGCCGTTCCAGAATCAGCTTGAG +
Preference number: 6 (lower is better)
Translates to: EGIPPQRLIPPD*PLGEPFQNQLE
Trigger: CTCAAGCTGATTCTGGAACGGCTCGCCCAGGGGGCAATCTGGTGGAATCAGTCTCTGTGGTGGGATCCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CAA 72 bp CAACTGCTCTTGGCCCTCCTTCCAGTTCCCAGTCTCTaGCAGGTACACCTGCTGAGCAGGAGCACCTGGAGC +
Preference number: 6 (lower is better)
Translates to: QLLLALLPVPSL*QVHLLSRSTWS
Trigger: GCTCCAGGTGCTCCTGCTCAGCAGGTGTACCTGCAAGAGACTGGGAACTGGAAGGAGGGCCAAGAGCAGTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS CAA 90 bp CCCGCAGGAGGCTTTCTTCTCTTGGGAAAGCCCCAAGCTGCCACTTaGCTTACTCAGCCGACTTTGCCCTGGCAACTGCTGCCTCTCTTG +
Preference number: 6 (lower is better)
Translates to: PAGGFLLLGKPQAAT*LTQPTLPWQLLPLL
Trigger: CAAGAGAGGCAGCAGTTGCCAGGGCAAAGTCGGCTGAGTAAGCAAAGTGGCAGCTTGGGGCTTTCCCAAGAGAAGAAAGCCTCCTGCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS GCA 72 bp GGAGTCTTCTGCTGCCAGGTCCCTTCATCCCTATTCTaGTCCCAGGAGTCAAACCAGTCAGCAGTGCCGACG +
Preference number: 6 (lower is better)
Translates to: GVFCCQVPSSLF*SQESNQSAVPT
Trigger: CGTCGGCACTGCTGACTGGTTTGACTCCTGGGAGCAGAATAGGGATGAAGGGACCTGGCAGCAGAAGACTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS GCA 72 bp CCTCATCCCCCTGCTTGGGGCTATCCCATGATGCTCTaGTTCCAGGTAGTACATGGCTCCACCCAACAGCTC +
Preference number: 6 (lower is better)
Translates to: PHPPAWGYPMML*FQVVHGSTQQL
Trigger: GAGCTGTTGGGTGGAGCCATGTACTACCTGGAAGCAGAGCATCATGGGATAGCCCCAAGCAGGGGGATGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CCA 72 bp GAGGATAGATGCCAGCCTCCAGACTGTGAAGAGGGATaGAGCATCCAGACAGGCTCACGTTGCCCTGGAAGG +
Preference number: 6 (lower is better)
Translates to: EDRCQPPDCEEG*SIQTGSRCPGR
Trigger: CCTTCCAGGGCAACGTGAGCCTGTCTGGATGCTCCATCCCTCTTCACAGTCTGGAGGCTGGCATCTATCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CAA 90 bp GTATCTGAGCAACTGCTCTTGGCCCTCCTTCCAGTTCCCAGTCTCTaGCAGGTACACCTGCTGAGCAGGAGCACCTGGAGCACAGATGTG +
Preference number: 6 (lower is better)
Translates to: VSEQLLLALLPVPSL*QVHLLSRSTWSTDV
Trigger: CACATCTGTGCTCCAGGTGCTCCTGCTCAGCAGGTGTACCTGCAAGAGACTGGGAACTGGAAGGAGGGCCAAGAGCAGTTGCTCAGATAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS CAA 90 bp CAGCAGCTGATTTTGGCCTGCCAGCTGGTATCTGAGCAACTGCTCTaGGCCCTCCTTCCAGTTCCCAGTCTCTTGCAGGTACACCTGCTG +
Preference number: 6 (lower is better)
Translates to: QQLILACQLVSEQLL*ALLPVPSLLQVHLL
Trigger: CAGCAGGTGTACCTGCAAGAGACTGGGAACTGGAAGGAGGGCCAAGAGCAGTTGCTCAGATACCAGCTGGCAGGCCAAAATCAGCTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS TCA 72 bp GTTCACCGTCAGGCAGGTCTGCTGGTCAATATAGACTaGCGTGGTGTTCTGTCCTCTCAGGCCTGTGCCCTC +
Preference number: 6 (lower is better)
Translates to: VHRQAGLLVNID*RGVLSSQACAL
Trigger: GAGGGCACAGGCCTGAGAGGACAGAACACCACGTCAGTCTATATTGACCAGCAGACCTGCCTGACGGTGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS TCA 72 bp CAACAGAGCCATTCCCTGTGGGAACAATGCACCGGATaGGCTCAGCACCGATGTTCACCGTCAGGCAGGTCT +
Preference number: 6 (lower is better)
Translates to: QQSHSLWEQCTG*AQHRCSPSGRS
Trigger: AGACCTGCCTGACGGTGAACATCGGTGCTGAGCTCATCCGGTGCATTGTTCCCACAGGGAATGGCTCTGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS TCA 72 bp GCCGACTTTGCCCTGGCAACTGCTGCCTCTCTTGTCTaGAGTCTGGGCATAGCAGCAGCAGCTGATTTTGGC +
Preference number: 6 (lower is better)
Translates to: ADFALATAASLV*SLGIAAAADFG
Trigger: GCCAAAATCAGCTGCTGCTGCTATGCCCAGACTTCAGACAAGAGAGGCAGCAGTTGCCAGGGCAAAGTCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS GCA 72 bp GAGACATTCCCTGGAGAAAATCCCGCTCCAAACACATaGACCAGCCTTCCACCCAGGCAGCCGAAGTTCTCC +
Preference number: 6 (lower is better)
Translates to: ETFPGENPAPNT*TSLPPRQPKFS
Trigger: GGAGAACTTCGGCTGCCTGGGTGGAAGGCTGGTGCATGTGTTTGGAGCGGGATTTTCTCCAGGGAATGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS GCA 72 bp CGCAGGAGGCTTTCTTCTCTTGGGAAAGCCCCAAGCTaGCACTTTGCTTACTCAGCCGACTTTGCCCTGGCA +
Preference number: 6 (lower is better)
Translates to: RRRLSSLGKAPS*HFAYSADFALA
Trigger: TGCCAGGGCAAAGTCGGCTGAGTAAGCAAAGTGGCAGCTTGGGGCTTTCCCAAGAGAAGAAAGCCTCCTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS CCA 72 bp CCTGATACATTCAGCACCTGTACTTCTGGAAGCCTCTaGGCTCGGACTCGGATCTGGTGCTTCTCCCGTAGG +
Preference number: 6 (lower is better)
Translates to: PDTFSTCTSGSL*ARTRIWCFSRR
Trigger: CCTACGGGAGAAGCACCAGATCCGAGTCCGAGCCCAGAGGCTTCCAGAAGTACAGGTGCTGAATGTATCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CCA 72 bp CCGTCAGGCAGGTCTGCTGGTCAATATAGACTGACGTaGTGTTCTGTCCTCTCAGGCCTGTGCCCTCTATGG +
Preference number: 6 (lower is better)
Translates to: PSGRSAGQYRLT*CSVLSGLCPLW
Trigger: CCATAGAGGGCACAGGCCTGAGAGGACAGAACACCACGTCAGTCTATATTGACCAGCAGACCTGCCTGACGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CCA 72 bp AGTCTCTTGCAGGTACACCTGCTGAGCAGGAGCACCTaGAGCACAGATGTGCCCATGGGATGTGATGCCAGT +
Preference number: 6 (lower is better)
Translates to: SLLQVHLLSRST*STDVPMGCDAS
Trigger: ACTGGCATCACATCCCATGGGCACATCTGTGCTCCAGGTGCTCCTGCTCAGCAGGTGTACCTGCAAGAGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS CCA 72 bp AATGCCTCAGTGGCCCCGCAGGAGGCTTTCTTCTCTTaGGAAAGCCCCAAGCTGCCACTTTGCTTACTCAGC +
Preference number: 6 (lower is better)
Translates to: NASVAPQEAFFS*ESPKLPLCLLS
Trigger: GCTGAGTAAGCAAAGTGGCAGCTTGGGGCTTTCCCAAGAGAAGAAAGCCTCCTGCGGGGCCACTGAGGCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS CAA 72 bp GAAGCTGGATGCGAAAGTGTCCTCCTAGAGGTGGACTaGTCCGCTGTCGTCTCTGTGTCGTCACCAGGACCA +
Preference number: 6 (lower is better)
Translates to: EAGCESVLLEVD*SAVVSVSSPGP
Trigger: TGGTCCTGGTGACGACACAGAGACGACAGCGGACAAGTCCACCTCTAGGAGGACACTTTCGCATCCAGCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CAA 90 bp ATGAAGGCAGAATGCCTCAGTGGCCCCGCAGGAGGCTTTCTTCTCTaGGGAAAGCCCCAAGCTGCCACTTTGCTTACTCAGCCGACTTTG +
Preference number: 6 (lower is better)
Translates to: MKAECLSGPAGGFLL*GKPQAATLLTQPTL
Trigger: CAAAGTCGGCTGAGTAAGCAAAGTGGCAGCTTGGGGCTTTCCCAAGAGAAGAAAGCCTCCTGCGGGGCCACTGAGGCATTCTGCCTTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS TCA 72 bp ATACATGAAGGTGAAGCCTTTCCCCACCAAGCTTGGTaGAGGACCACGGGCGAAGAACCTGTTGCCAGCCCA +
Preference number: 6 (lower is better)
Translates to: IHEGEAFPHQAW*RTTGEEPVASP
Trigger: TGGGCTGGCAACAGGTTCTTCGCCCGTGGTCCTTCACCAAGCTTGGTGGGGAAAGGCTTCACCTTCATGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS TCA 72 bp TTCAACTGGACCTGGCTGGGCTCTTCTGGGAAGGACTaGACGATCACTCTGGCTCCCATATCCCTGGATCCT +
Preference number: 6 (lower is better)
Translates to: FNWTWLGSSGKD*TITLAPISLDP
Trigger: AGGATCCAGGGATATGGGAGCCAGAGTGATCGTTCAGTCCTTCCCAGAAGAGCCCAGCCAGGTCCAGTTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS GCA 72 bp AAGCAACCCCCTCACAGTAAGTATGGTCCCACCACATaGCGAACCCTGCGATGGGAAGATGGCCATTATCCG +
Preference number: 6 (lower is better)
Translates to: KQPPHSKYGPTT*RTLRWEDGHYP
Trigger: CGGATAATGGCCATCTTCCCATCGCAGGGTTCGGCATGTGGTGGGACCATACTTACTGTGAGGGGGTTGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS GCA 72 bp CTTTGCTTACTCAGCCGACTTTGCCCTGGCAACTGCTaGCTCTCTTGTCTGAAGTCTGGGCATAGCAGCAGC +
Preference number: 6 (lower is better)
Translates to: LCLLSRLCPGNC*LSCLKSGHSSS
Trigger: GCTGCTGCTATGCCCAGACTTCAGACAAGAGAGGCAGCAGTTGCCAGGGCAAAGTCGGCTGAGTAAGCAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS GCA 72 bp AGCCCCAAGCTGCCACTTTGCTTACTCAGCCGACTTTaGCCTGGCAACTGCTGCCTCTCTTGTCTGAAGTCT +
Preference number: 6 (lower is better)
Translates to: SPKLPLCLLSRL*PGNCCLSCLKS
Trigger: AGACTTCAGACAAGAGAGGCAGCAGTTGCCAGGGCAAAGTCGGCTGAGTAAGCAAAGTGGCAGCTTGGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS GCA 72 bp GCTTTCTTCTCTTGGGAAAGCCCCAAGCTGCCACTTTaGTTACTCAGCCGACTTTGCCCTGGCAACTGCTGC +
Preference number: 6 (lower is better)
Translates to: AFFSWESPKLPL*LLSRLCPGNCC
Trigger: GCAGCAGTTGCCAGGGCAAAGTCGGCTGAGTAAGCAAAGTGGCAGCTTGGGGCTTTCCCAAGAGAAGAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS CCA 72 bp CCAGGTAGTACATGGCTCCACCCAACAGCTCCAACTTaGGAGTCTTCTGCTGCCAGGTCCCTTCATCCCTAT +
Preference number: 6 (lower is better)
Translates to: PGSTWLHPTAPT*ESSAARSLHPY
Trigger: ATAGGGATGAAGGGACCTGGCAGCAGAAGACTCCCAAGTTGGAGCTGTTGGGTGGAGCCATGTACTACCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CCA 72 bp TGGTCCCACCACATGCCGAACCCTGCGATGGGAAGATaGCCATTATCCGAGGCATCACTGCAAATTGCTGGA +
Preference number: 6 (lower is better)
Translates to: WSHHMPNPAMGR*PLSEASLQIAG
Trigger: TCCAGCAATTTGCAGTGATGCCTCGGATAATGGCCATCTTCCCATCGCAGGGTTCGGCATGTGGTGGGACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CCA 72 bp GAAGCTCCAGGCAAGGGGTCACCCTCCAGGCTAACCTaGCAGAGAATGGTGTGGTCTCCCAAACTCAAAATC +
Preference number: 6 (lower is better)
Translates to: EAPGKGSPSRLT*QRMVWSPKLKI
Trigger: GATTTTGAGTTTGGGAGACCACACCATTCTCTGCCAGGTTAGCCTGGAGGGTGACCCCTTGCCTGGAGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CCA 72 bp CAAGCTGCCACTTTGCTTACTCAGCCGACTTTGCCCTaGCAACTGCTGCCTCTCTTGTCTGAAGTCTGGGCA +
Preference number: 6 (lower is better)
Translates to: QAATLLTQPTLP*QLLPLLSEVWA
Trigger: TGCCCAGACTTCAGACAAGAGAGGCAGCAGTTGCCAGGGCAAAGTCGGCTGAGTAAGCAAAGTGGCAGCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS CCA 72 bp TTTCCGGGTGTACTGAATGAAGGCAGAATGCCTCAGTaGCCCCGCAGGAGGCTTTCTTCTCTTGGGAAAGCC +
Preference number: 6 (lower is better)
Translates to: FPGVLNEGRMPQ*PRRRLSSLGKA
Trigger: GGCTTTCCCAAGAGAAGAAAGCCTCCTGCGGGGCCACTGAGGCATTCTGCCTTCATTCAGTACACCCGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS CAA 72 bp GTAGGAACTCCCGTAGAGTGTGATCTGAGCTCTGCCTaGGAAGGGCTTGTCTTCGGATCCAATCCGGAGCTC +
Preference number: 6 (lower is better)
Translates to: VGTPVECDLSSA*EGLVFGSNPEL
Trigger: GAGCTCCGGATTGGATCCGAAGACAAGCCCTTCCAAGGCAGAGCTCAGATCACACTCTACGGGAGTTCCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CAA 72 bp AAGCCCCAAGCTGCCACTTTGCTTACTCAGCCGACTTaGCCCTGGCAACTGCTGCCTCTCTTGTCTGAAGTC +
Preference number: 6 (lower is better)
Translates to: KPQAATLLTQPT*PWQLLPLLSEV
Trigger: GACTTCAGACAAGAGAGGCAGCAGTTGCCAGGGCAAAGTCGGCTGAGTAAGCAAAGTGGCAGCTTGGGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS CAA 72 bp GGCTTTCTTCTCTTGGGAAAGCCCCAAGCTGCCACTTaGCTTACTCAGCCGACTTTGCCCTGGCAACTGCTG +
Preference number: 6 (lower is better)
Translates to: GFLLLGKPQAAT*LTQPTLPWQLL
Trigger: CAGCAGTTGCCAGGGCAAAGTCGGCTGAGTAAGCAAAGTGGCAGCTTGGGGCTTTCCCAAGAGAAGAAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS CAA 90 bp TCAGCCAGGTGTTGTGAATCTGGACACCAATCCTCATCCCCCTGCTaGGGGCTATCCCATGATGCTCTGCTTCCAGGTAGTACATGGCTC +
Preference number: 6 (lower is better)
Translates to: SARCCESGHQSSSPC*GLSHDALLPGSTWL
Trigger: GAGCCATGTACTACCTGGAAGCAGAGCATCATGGGATAGCCCCAAGCAGGGGGATGAGGATTGGTGTCCAGATTCACAACACCTGGCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CAA 90 bp CACCAGATGCTCGCCTCCGTTAAGTTCACAATGTCACAGGACCGATaGCCCACAAGTACCCAAACCAAAGCTGGGTCCCTGCTGAAGCCT +
Preference number: 6 (lower is better)
Translates to: HQMLASVKFTMSQDR*PTSTQTKAGSLLKP
Trigger: AGGCTTCAGCAGGGACCCAGCTTTGGTTTGGGTACTTGTGGGCAATCGGTCCTGTGACATTGTGAACTTAACGGAGGCGAGCATCTGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CAA 90 bp GCCACAACGTTGCCATGGAGGTTGATGTCCTTTACCTGGTTCACTTaGATTCCCGCCACCCAAATGGTGGACCACGCTGGCTGTGTCATC +
Preference number: 6 (lower is better)
Translates to: ATTLPWRLMSFTWFT*IPATQMVDHAGCVI
Trigger: GATGACACAGCCAGCGTGGTCCACCATTTGGGTGGCGGGAATCAAAGTGAACCAGGTAAAGGACATCAACCTCCATGGCAACGTTGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS TCA 72 bp TGCAATCGAACTGCCAGCTCTCGGGGCTGGTCCTCGTaGGACTCCAGTCACAGGTGGTATTCTTTACCATGT +
Preference number: 6 (lower is better)
Translates to: CNRTASSRGWSS*DSSHRWYSLPC
Trigger: ACATGGTAAAGAATACCACCTGTGACTGGAGTCTCACGAGGACCAGCCCCGAGAGCTGGCAGTTCGATTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS TCA 72 bp AATACCATCGGCTCATCAGCTGTGGTGGCTAACCTCTaGCCCCTAATCAGCACAGTGGTCAGAGACCCACTG +
Preference number: 6 (lower is better)
Translates to: NTIGSSAVVANL*PLISTVVRDPL
Trigger: CAGTGGGTCTCTGACCACTGTGCTGATTAGGGGTCAGAGGTTAGCCACCACAGCTGATGAGCCGATGGTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS TCA 72 bp CTCTCTTGTCTGAAGTCTGGGCATAGCAGCAGCAGCTaGTTTTGGCCTGCCAGCTGGTATCTGAGCAACTGC +
Preference number: 6 (lower is better)
Translates to: LSCLKSGHSSSS*FWPASWYLSNC
Trigger: GCAGTTGCTCAGATACCAGCTGGCAGGCCAAAATCAGCTGCTGCTGCTATGCCCAGACTTCAGACAAGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS GCA 72 bp AGGTGTTGTGAATCTGGACACCAATCCTCATCCCCCTaGTTGGGGCTATCCCATGATGCTCTGCTTCCAGGT +
Preference number: 6 (lower is better)
Translates to: RCCESGHQSSSP*LGLSHDALLPG
Trigger: ACCTGGAAGCAGAGCATCATGGGATAGCCCCAAGCAGGGGGATGAGGATTGGTGTCCAGATTCACAACACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS GCA 72 bp CTCACAGTAAGTATGGTCCCACCACATGCCGAACCCTaGGATGGGAAGATGGCCATTATCCGAGGCATCACT +
Preference number: 6 (lower is better)
Translates to: LTVSMVPPHAEP*DGKMAIIRGIT
Trigger: AGTGATGCCTCGGATAATGGCCATCTTCCCATCGCAGGGTTCGGCATGTGGTGGGACCATACTTACTGTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CCA 72 bp GGGCTATCCCATGATGCTCTGCTTCCAGGTAGTACATaGCTCCACCCAACAGCTCCAACTTGGGAGTCTTCT +
Preference number: 6 (lower is better)
Translates to: GLSHDALLPGST*LHPTAPTWESS
Trigger: AGAAGACTCCCAAGTTGGAGCTGTTGGGTGGAGCCATGTACTACCTGGAAGCAGAGCATCATGGGATAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CCA 72 bp AGAGGGATGGAGCATCCAGACAGGCTCACGTTGCCCTaGAAGGACTGTGTCTCAACATCACAGTTCAGGTTC +
Preference number: 6 (lower is better)
Translates to: RGMEHPDRLTLP*KDCVSTSQFRF
Trigger: GAACCTGAACTGTGATGTTGAGACACAGTCCTTCCAGGGCAACGTGAGCCTGTCTGGATGCTCCATCCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CCA 72 bp AGACTTGAAACTGCACTCCCTTCAACTGGACCTGGCTaGGCTCTTCTGGGAAGGACTGAACGATCACTCTGG +
Preference number: 6 (lower is better)
Translates to: RLETALPSTGPG*ALLGRTERSLW
Trigger: CCAGAGTGATCGTTCAGTCCTTCCCAGAAGAGCCCAGCCAGGTCCAGTTGAAGGGAGTGCAGTTTCAAGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CAA 72 bp CTCGCCTCCGTTAAGTTCACAATGTCACAGGACCGATaGCCCACAAGTACCCAAACCAAAGCTGGGTCCCTG +
Preference number: 6 (lower is better)
Translates to: LASVKFTMSQDR*PTSTQTKAGSL
Trigger: CAGGGACCCAGCTTTGGTTTGGGTACTTGTGGGCAATCGGTCCTGTGACATTGTGAACTTAACGGAGGCGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CAA 72 bp TTGCCATGGAGGTTGATGTCCTTTACCTGGTTCACTTaGATTCCCGCCACCCAAATGGTGGACCACGCTGGC +
Preference number: 6 (lower is better)
Translates to: LPWRLMSFTWFT*IPATQMVDHAG
Trigger: GCCAGCGTGGTCCACCATTTGGGTGGCGGGAATCAAAGTGAACCAGGTAAAGGACATCAACCTCCATGGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS TCA 72 bp CCCACTGAGCCGTGCTCTGAAAGGTTGTCCTTCCTGTaGCCAAAACCCAAATGGAGAACTGGCATTAGGGAC +
Preference number: 6 (lower is better)
Translates to: PTEPCSERLSFL*PKPKWRTGIRD
Trigger: GTCCCTAATGCCAGTTCTCCATTTGGGTTTTGGTCACAGGAAGGACAACCTTTCAGAGCACGGCTCAGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS TCA 72 bp GGACTCGGATCTGGTGCTTCTCCCGTAGGTAAGTGGTaGCCACATCAGGATTCAGCCAGGTGTTGTGAATCT +
Preference number: 6 (lower is better)
Translates to: GLGSGASPVGKW*PHQDSARCCES
Trigger: AGATTCACAACACCTGGCTGAATCCTGATGTGGTCACCACTTACCTACGGGAGAAGCACCAGATCCGAGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS TCA 72 bp AGCAGTTCACAAGAGGAGCACTTGTGGCCTCGGATGTaGAAGCCAAGTCTCTCTGATCCTGCCACAACGTTG +
Preference number: 6 (lower is better)
Translates to: SSSQEEHLWPRM*KPSLSDPATTL
Trigger: CAACGTTGTGGCAGGATCAGAGAGACTTGGCTTTCACATCCGAGGCCACAAGTGCTCCTCTTGTGAACTGCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS TCA 72 bp TCAACTGGTGGGGGCACTGGTTCACCTTGCCCAGCATaGCCTTCATTCTCATATCTTCTCCCACCACAGTGT +
Preference number: 6 (lower is better)
Translates to: STGGGTGSPCPA*PSFSYLLPPQC
Trigger: ACACTGTGGTGGGAGAAGATATGAGAATGAAGGTCATGCTGGGCAAGGTGAACCAGTGCCCCCACCAGTTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS GCA 72 bp CAAAACCCAAATGGAGAACTGGCATTAGGGACAATCTaGCACCTGTACCCTGGGGTGGCTTCAGTCAGTTCC +
Preference number: 6 (lower is better)
Translates to: QNPNGELALGTI*HLYPGVASVSS
Trigger: GGAACTGACTGAAGCCACCCCAGGGTACAGGTGGCAGATTGTCCCTAATGCCAGTTCTCCATTTGGGTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS GCA 72 bp TGTGAAGAGGGATGGAGCATCCAGACAGGCTCACGTTaGCCTGGAAGGACTGTGTCTCAACATCACAGTTCA +
Preference number: 6 (lower is better)
Translates to: CEEGWSIQTGSR*PGRTVSQHHSS
Trigger: TGAACTGTGATGTTGAGACACAGTCCTTCCAGGGCAACGTGAGCCTGTCTGGATGCTCCATCCCTCTTCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS GCA 72 bp TATAGACTGACGTGGTGTTCTGTCCTCTCAGGCCTGTaGCCTCTATGGTCAAGAGGCTTCCACCATGTAAGC +
Preference number: 6 (lower is better)
Translates to: YRLTWCSVLSGL*PLWSRGFHHVS
Trigger: GCTTACATGGTGGAAGCCTCTTGACCATAGAGGGCACAGGCCTGAGAGGACAGAACACCACGTCAGTCTATA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CCA 72 bp CTGCGCCTTGGAAAACTTGAAAGTACAGCTATCTCGTaGTCCTGGATTTGGACTGCTTACCAGCTGTCCCCC +
Preference number: 6 (lower is better)
Translates to: LRLGKLESTAIS*SWIWTAYQLSP
Trigger: GGGGGACAGCTGGTAAGCAGTCCAAATCCAGGACCACGAGATAGCTGTACTTTCAAGTTTTCCAAGGCGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CCA 72 bp AGTAAGTATGGTCCCACCACATGCCGAACCCTGCGATaGGAAGATGGCCATTATCCGAGGCATCACTGCAAA +
Preference number: 6 (lower is better)
Translates to: SKYGPTTCRTLR*EDGHYPRHHCK
Trigger: TTTGCAGTGATGCCTCGGATAATGGCCATCTTCCCATCGCAGGGTTCGGCATGTGGTGGGACCATACTTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CCA 72 bp TGGGCACCACCTGCACTTTCCCAAACTGTGAAGCTCTaGAACAGAGTGGTGCCAGTGACATTATCCCAAGGT +
Preference number: 6 (lower is better)
Translates to: WAPPALSQTVKL*NRVVPVTLSQG
Trigger: ACCTTGGGATAATGTCACTGGCACCACTCTGTTCCAGAGCTTCACAGTTTGGGAAAGTGCAGGTGGTGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CCA 72 bp GCCACAACGTTGCCATGGAGGTTGATGTCCTTTACCTaGTTCACTTTGATTCCCGCCACCCAAATGGTGGAC +
Preference number: 6 (lower is better)
Translates to: ATTLPWRLMSFT*FTLIPATQMVD
Trigger: GTCCACCATTTGGGTGGCGGGAATCAAAGTGAACCAGGTAAAGGACATCAACCTCCATGGCAACGTTGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CAA 72 bp TGTTGTGAATCTGGACACCAATCCTCATCCCCCTGCTaGGGGCTATCCCATGATGCTCTGCTTCCAGGTAGT +
Preference number: 6 (lower is better)
Translates to: CCESGHQSSSPC*GLSHDALLPGS
Trigger: ACTACCTGGAAGCAGAGCATCATGGGATAGCCCCAAGCAGGGGGATGAGGATTGGTGTCCAGATTCACAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CAA 72 bp TCCAGCAGAAGCAATTGGCCATTCTCCACTGTGACGTaGTCGCCATCTTGTGGCAGCCTTTCAGGAAACCAG +
Preference number: 6 (lower is better)
Translates to: SSRSNWPFSTVT*SPSCGSLSGNQ
Trigger: CTGGTTTCCTGAAAGGCTGCCACAAGATGGCGACAACGTCACAGTGGAGAATGGCCAATTGCTTCTGCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CAA 90 bp CTTCTGGACACTCCATTCATCAACTGGTGGGGGCACTGGTTCACCTaGCCCAGCATGACCTTCATTCTCATATCTTCTCCCACCACAGTG +
Preference number: 6 (lower is better)
Translates to: LLDTPFINWWGHWFT*PSMTFILISSPTTV
Trigger: CACTGTGGTGGGAGAAGATATGAGAATGAAGGTCATGCTGGGCAAGGTGAACCAGTGCCCCCACCAGTTGATGAATGGAGTGTCCAGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS CAA 90 bp CAGTGCGGGCACCACCATGTTCACGTTCACCAGGTGTATCTCCAATaGAGAGCCATTGTTGGGGTAAAGAACACCCAACTCCAAACCATC +
Preference number: 6 (lower is better)
Translates to: QCGHHHVHVHQVYLQ*RAIVGVKNTQLQTI
Trigger: GATGGTTTGGAGTTGGGTGTTCTTTACCCCAACAATGGCTCTCAATTGGAGATACACCTGGTGAACGTGAACATGGTGGTGCCCGCACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CAA 90 bp GAGGTGAATACAGGCCACAGAATACCAATTCGACCTCCTCTTGGATaGGAGGGAGCTCTATCTGTTGATGTCAAGTTGGCTGAGTGCGGC +
Preference number: 6 (lower is better)
Translates to: EVNTGHRIPIRPPLG*EGALSVDVKLAECG
Trigger: GCCGCACTCAGCCAACTTGACATCAACAGATAGAGCTCCCTCCAATCCAAGAGGAGGTCGAATTGGTATTCTGTGGCCTGTATTCACCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS TCA 72 bp ATCAATGGAGTACCACACAGAATGGACACAGGGAGTTaGCCCTTGGAGGTACTGGAAAGAGCAGGAACCTGG +
Preference number: 6 (lower is better)
Translates to: INGVPHRMDTGS*PLEVLERAGTW
Trigger: CCAGGTTCCTGCTCTTTCCAGTACCTCCAAGGGTCAACTCCCTGTGTCCATTCTGTGTGGTACTCCATTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS TCA 72 bp CTCAACATCACAGTTCAGGTTCCCCAGAAGGATGACTaGGTTGGAGAGGTTACTTCCTCCCACATGCAGGCT +
Preference number: 6 (lower is better)
Translates to: LNITVQVPQKDD*VGEVTSSHMQA
Trigger: AGCCTGCATGTGGGAGGAAGTAACCTCTCCAACTCAGTCATCCTTCTGGGGAACCTGAACTGTGATGTTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS TCA 72 bp CACACAAGTAAAAGGACCCGAGAGGTCAACCCGAACTaGCCTCCTTCTAGAGTTAAGAAGCAACCCCCTCAC +
Preference number: 6 (lower is better)
Translates to: HTSKRTREVNPN*PPSRVKKQPPH
Trigger: GTGAGGGGGTTGCTTCTTAACTCTAGAAGGAGGTCAGTTCGGGTTGACCTCTCGGGTCCTTTTACTTGTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS TCA 72 bp CTTGCCTCTTCCCTTATGAAAAGAGTGCAATTCCCCTaGCACTCGCTGGTTAGCCCATTGACCAGGACTGTG +
Preference number: 6 (lower is better)
Translates to: LASSLMKRVQFP*HSLVSPLTRTV
Trigger: CACAGTCCTGGTCAATGGGCTAACCAGCGAGTGTCAGGGGAATTGCACTCTTTTCATAAGGGAAGAGGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS GCA 72 bp TGGATTTGGACTGCTTACCAGCTGTCCCCCGAAGTATaGTTCCAGGAAGTACAGACCCTCATGTGCTTCAGA +
Preference number: 6 (lower is better)
Translates to: WIWTAYQLSPEV*FQEVQTLMCFR
Trigger: TCTGAAGCACATGAGGGTCTGTACTTCCTGGAAGCATACTTCGGGGGACAGCTGGTAAGCAGTCCAAATCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS GCA 72 bp ACATGCAGGCTCAGGCTGCTATTTGTGATTTCTCCTTaGATGGCAGTGACTACTGGTGTTGCTGCCGCTTCA +
Preference number: 6 (lower is better)
Translates to: TCRLRLLFVISP*MAVTTGVAAAS
Trigger: TGAAGCGGCAGCAACACCAGTAGTCACTGCCATGCAAGGAGAAATCACAAATAGCAGCCTGAGCCTGCATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CCA 72 bp GAGGTACTGGAAAGAGCAGGAACCTGGGCAATGAGCTaGTACATCATTCACTCGCACAACCACCTGAGTATG +
Preference number: 6 (lower is better)
Translates to: EVLERAGTWAMS*YIIHSHNHLSM
Trigger: CATACTCAGGTGGTTGTGCGAGTGAATGATGTACCAGCTCATTGCCCAGGTTCCTGCTCTTTCCAGTACCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CCA 72 bp CCAGCGTTTCCGTATCTCAGTAATCTTGACGGTAATTaGCTGATTGGGCGTCTCACACTCCATCTCTGCCTC +
Preference number: 6 (lower is better)
Translates to: PAFPYLSNLDGN*LIGRLTLHLCL
Trigger: GAGGCAGAGATGGAGTGTGAGACGCCCAATCAGCCAATTACCGTCAAGATTACTGAGATACGGAAACGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CCA 72 bp AGTCCATTCTGCCTCTGTTTTAGGAAATACAGAAACTaGTGGAGGCAGACCCAGGGCTCTCCCATCCAGATC +
Preference number: 6 (lower is better)
Translates to: SPFCLCFRKYRN*WRQTQGSPIQI
Trigger: GATCTGGATGGGAGAGCCCTGGGTCTGCCTCCACCAGTTTCTGTATTTCCTAAAACAGAGGCAGAATGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CCA 72 bp CTTCTGGACACTCCATTCATCAACTGGTGGGGGCACTaGTTCACCTTGCCCAGCATGACCTTCATTCTCATA +
Preference number: 6 (lower is better)
Translates to: LLDTPFINWWGH*FTLPSMTFILI
Trigger: TATGAGAATGAAGGTCATGCTGGGCAAGGTGAACCAGTGCCCCCACCAGTTGATGAATGGAGTGTCCAGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS CAA 72 bp ATGAGAACGTCATCCCCAGGGCCTGGAATGGTATTGTaGTATCCTCCCCAGCCTTCTTCAACACCTTGCCAT +
Preference number: 6 (lower is better)
Translates to: MRTSSPGPGMVL*YPPQPSSTPCH
Trigger: ATGGCAAGGTGTTGAAGAAGGCTGGGGAGGATACAACAATACCATTCCAGGCCCTGGGGATGACGTTCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CAA 72 bp AGTCTCTCTGATCCTGCCACAACGTTGCCATGGAGGTaGATGTCCTTTACCTGGTTCACTTTGATTCCCGCC +
Preference number: 6 (lower is better)
Translates to: SLSDPATTLPWR*MSFTWFTLIPA
Trigger: GGCGGGAATCAAAGTGAACCAGGTAAAGGACATCAACCTCCATGGCAACGTTGTGGCAGGATCAGAGAGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CAA 72 bp ACTCCATTCATCAACTGGTGGGGGCACTGGTTCACCTaGCCCAGCATGACCTTCATTCTCATATCTTCTCCC +
Preference number: 6 (lower is better)
Translates to: TPFINWWGHWFT*PSMTFILISSP
Trigger: GGGAGAAGATATGAGAATGAAGGTCATGCTGGGCAAGGTGAACCAGTGCCCCCACCAGTTGATGAATGGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS CAA 90 bp ACTTCCTCCCACATGCAGGCTCAGGCTGCTATTTGTGATTTCTCCTaGCATGGCAGTGACTACTGGTGTTGCTGCCGCTTCATACATGAA +
Preference number: 6 (lower is better)
Translates to: TSSHMQAQAAICDFS*HGSDYWCCCRFIHE
Trigger: TTCATGTATGAAGCGGCAGCAACACCAGTAGTCACTGCCATGCAAGGAGAAATCACAAATAGCAGCCTGAGCCTGCATGTGGGAGGAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CAA 90 bp ACCCTGCGATGGGAAGATGGCCATTATCCGAGGCATCACTGCAAATaGCTGGAGCACCACAGACATATTAGCAAATCCCATCTGCTTCTG +
Preference number: 6 (lower is better)
Translates to: TLRWEDGHYPRHHCK*LEHHRHISKSHLLL
Trigger: CAGAAGCAGATGGGATTTGCTAATATGTCTGTGGTGCTCCAGCAATTTGCAGTGATGCCTCGGATAATGGCCATCTTCCCATCGCAGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS TCA 72 bp GATGGAGGCCACTTTCACCTTAGTCCTTGGTTCCTCTaGCCAACTGAAATGCAAGGAAGCTTGGCTATCTGC +
Preference number: 6 (lower is better)
Translates to: DGGHFHLSPWFL*PTEMQGSLAIC
Trigger: GCAGATAGCCAAGCTTCCTTGCATTTCAGTTGGTCAGAGGAACCAAGGACTAAGGTGAAAGTGGCCTCCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS TCA 72 bp CCAAATCCGTATAGTTCATCAGCCTCGCCACTCCAATaGCCAGGGTCTCACCGCCTGCTATATTGCTTATGT +
Preference number: 6 (lower is better)
Translates to: PNPYSSSASPLQ*PGSHRLLYCLC
Trigger: ACATAAGCAATATAGCAGGCGGTGAGACCCTGGTCATTGGAGTGGCGAGGCTGATGAACTATACGGATTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS TCA 72 bp GTGTCTCAACATCACAGTTCAGGTTCCCCAGAAGGATaGCTGAGTTGGAGAGGTTACTTCCTCCCACATGCA +
Preference number: 6 (lower is better)
Translates to: VSQHHSSGSPEG*LSWRGYFLPHA
Trigger: TGCATGTGGGAGGAAGTAACCTCTCCAACTCAGTCATCCTTCTGGGGAACCTGAACTGTGATGTTGAGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS TCA 72 bp AGGCCCGAGAATGATGGAAACATTGACTCTGCCCAATaGTCTGGCACAAAGAGGCATTGGGAACTTTCCTCG +
Preference number: 6 (lower is better)
Translates to: RPENDGNIDSAQ*SGTKRHWELSS
Trigger: CGAGGAAAGTTCCCAATGCCTCTTTGTGCCAGATCATTGGGCAGAGTCAATGTTTCCATCATTCTCGGGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS TCA 72 bp AGCCAGGAACTTGACTCCATAGGGAAAGAAGGGAGTTaGGTAGGAACTCCCGTAGAGTGTGATCTGAGCTCT +
Preference number: 6 (lower is better)
Translates to: SQELDSIGKEGS*VGTPVECDLSS
Trigger: AGAGCTCAGATCACACTCTACGGGAGTTCCTACTCAACTCCCTTCTTTCCCTATGGAGTCAAGTTCCTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS TCA 72 bp TATGAAAGACTCTCTCATAGCTCCCACCAGAGTGAGTaGGCTCAGATGCTTATGGAAGGCTTGCCCCAAGAC +
Preference number: 6 (lower is better)
Translates to: YERLSHSSHQSE*AQMLMEGLPQD
Trigger: GTCTTGGGGCAAGCCTTCCATAAGCATCTGAGCTCACTCACTCTGGTGGGAGCTATGAGAGAGTCTTTCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS TCA 72 bp GATGTCAAGTTGGCTGAGTGCGGCTTCACTTTGTCCTaGATGCAGTCAAAAGAAGAGCTGGTGGCCACAATG +
Preference number: 6 (lower is better)
Translates to: DVKLAECGFTLS*MQSKEELVATM
Trigger: CATTGTGGCCACCAGCTCTTCTTTTGACTGCATTCAGGACAAAGTGAAGCCGCACTCAGCCAACTTGACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS TCA 72 bp TTTGTGCCATGGCTCCTGAGGCCACTGATTTGGTTCTaGGGTGAATACAGGCCACAGAATACCAATTCGACC +
Preference number: 6 (lower is better)
Translates to: FVPWLLRPLIWF*GEYRPQNTNST
Trigger: GGTCGAATTGGTATTCTGTGGCCTGTATTCACCTCAGAACCAAATCAGTGGCCTCAGGAGCCATGGCACAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CCA 72 bp GGGTCACCCTCCAGGCTAACCTGGCAGAGAATGGTGTaGTCTCCCAAACTCAAAATCACACAAGTAAAAGGA +
Preference number: 6 (lower is better)
Translates to: GSPSRLTWQRMV*SPKLKITQVKG
Trigger: TCCTTTTACTTGTGTGATTTTGAGTTTGGGAGACCACACCATTCTCTGCCAGGTTAGCCTGGAGGGTGACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CCA 72 bp CAGGCCACAGAATACCAATTCGACCTCCTCTTGGATTaGAGGGAGCTCTATCTGTTGATGTCAAGTTGGCTG +
Preference number: 6 (lower is better)
Translates to: QATEYQFDLLLD*RELYLLMSSWL
Trigger: CAGCCAACTTGACATCAACAGATAGAGCTCCCTCCAATCCAAGAGGAGGTCGAATTGGTATTCTGTGGCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CAA 72 bp CTCGCAAATGTAGAGGTAAGGCCACGATTCAAGCAGTaGCTCTGTCGCCATGGCAACTGTCAAATCACACTG +
Preference number: 6 (lower is better)
Translates to: LANVEVRPRFKQ*LCRHGNCQITL
Trigger: CAGTGTGATTTGACAGTTGCCATGGCGACAGAGCAACTGCTTGAATCGTGGCCTTACCTCTACATTTGCGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CAA 72 bp GTTGAGGATGCTTGTGTTAGTGTCCAGCAGAAGCAATaGGCCATTCTCCACTGTGACGTTGTCGCCATCTTG +
Preference number: 6 (lower is better)
Translates to: VEDACVSVQQKQ*AILHCDVVAIL
Trigger: CAAGATGGCGACAACGTCACAGTGGAGAATGGCCAATTGCTTCTGCTGGACACTAACACAAGCATCCTCAAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CAA 72 bp TTCGACCTCCTCTTGGATTGGAGGGAGCTCTATCTGTaGATGTCAAGTTGGCTGAGTGCGGCTTCACTTTGT +
Preference number: 6 (lower is better)
Translates to: FDLLLDWRELYL*MSSWLSAASLC
Trigger: ACAAAGTGAAGCCGCACTCAGCCAACTTGACATCAACAGATAGAGCTCCCTCCAATCCAAGAGGAGGTCGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CAA 72 bp GGTGGAGGCAGACCCAGGGCTCTCCCATCCAGATCCTaGAAGAGATATTTTCTTGGACTTGCACAGTCTAAT +
Preference number: 6 (lower is better)
Translates to: GGGRPRALPSRS*KRYFLGLAQSN
Trigger: ATTAGACTGTGCAAGTCCAAGAAAATATCTCTTCAAGGATCTGGATGGGAGAGCCCTGGGTCTGCCTCCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CAA 90 bp GGAACTTTCCTCGCAAATGTAGAGGTAAGGCCACGATTCAAGCAGTaGCTCTGTCGCCATGGCAACTGTCAAATCACACTGCACATAGGT +
Preference number: 6 (lower is better)
Translates to: GTFLANVEVRPRFKQ*LCRHGNCQITLHIG
Trigger: ACCTATGTGCAGTGTGATTTGACAGTTGCCATGGCGACAGAGCAACTGCTTGAATCGTGGCCTTACCTCTACATTTGCGAGGAAAGTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CAA 90 bp GAATACCAATTCGACCTCCTCTTGGATTGGAGGGAGCTCTATCTGTaGATGTCAAGTTGGCTGAGTGCGGCTTCACTTTGTCCTGAATGC +
Preference number: 6 (lower is better)
Translates to: EYQFDLLLDWRELYL*MSSWLSAASLCPEC
Trigger: GCATTCAGGACAAAGTGAAGCCGCACTCAGCCAACTTGACATCAACAGATAGAGCTCCCTCCAATCCAAGAGGAGGTCGAATTGGTATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CAA 90 bp ACAGAAACTGGTGGAGGCAGACCCAGGGCTCTCCCATCCAGATCCTaGAAGAGATATTTTCTTGGACTTGCACAGTCTAATTCAGGACAG +
Preference number: 6 (lower is better)
Translates to: TETGGGRPRALPSRS*KRYFLGLAQSNSGQ
Trigger: CTGTCCTGAATTAGACTGTGCAAGTCCAAGAAAATATCTCTTCAAGGATCTGGATGGGAGAGCCCTGGGTCTGCCTCCACCAGTTTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS TCA 72 bp GTTTCACATTTAGGAAGAGGTCTTCTCCAGTGGCACTaGTGGCAAGACCAGAGGGTCTCACCAACATCAAGA +
Preference number: 6 (lower is better)
Translates to: VSHLGRGLLQWH*WQDQRVSPTSR
Trigger: TCTTGATGTTGGTGAGACCCTCTGGTCTTGCCATCAGTGCCACTGGAGAAGACCTCTTCCTAAATGTGAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS TCA 72 bp CGTTTCCGTATCTCAGTAATCTTGACGGTAATTGGCTaGTTGGGCGTCTCACACTCCATCTCTGCCTCAGTT +
Preference number: 6 (lower is better)
Translates to: RFRISVILTVIG*LGVSHSISASV
Trigger: AACTGAGGCAGAGATGGAGTGTGAGACGCCCAATCAGCCAATTACCGTCAAGATTACTGAGATACGGAAACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS TCA 72 bp CTGCAGATTACCTTCTGGAGCATTGGCCTCCTGGCATaGAACAAGCAGCTTCTCCCTCTCATTAGTGAGATT +
Preference number: 6 (lower is better)
Translates to: LQITFWSIGLLA*NKQLLPLISEI
Trigger: AATCTCACTAATGAGAGGGAGAAGCTGCTTGTTTCATGCCAGGAGGCCAATGCTCCAGAAGGTAATCTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS GCA 72 bp GGGAAGATGGCCATTATCCGAGGCATCACTGCAAATTaGTGGAGCACCACAGACATATTAGCAAATCCCATC +
Preference number: 6 (lower is better)
Translates to: GKMAIIRGITAN*WSTTDILANPI
Trigger: GATGGGATTTGCTAATATGTCTGTGGTGCTCCAGCAATTTGCAGTGATGCCTCGGATAATGGCCATCTTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS GCA 72 bp CTGCGATGGGAAGATGGCCATTATCCGAGGCATCACTaGAAATTGCTGGAGCACCACAGACATATTAGCAAA +
Preference number: 6 (lower is better)
Translates to: LRWEDGHYPRHH*KLLEHHRHISK
Trigger: TTTGCTAATATGTCTGTGGTGCTCCAGCAATTTGCAGTGATGCCTCGGATAATGGCCATCTTCCCATCGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CCA 72 bp AAACTTGAAAGTACAGCTATCTCGTGGTCCTGGATTTaGACTGCTTACCAGCTGTCCCCCGAAGTATGCTTC +
Preference number: 6 (lower is better)
Translates to: KLESTAISWSWI*TAYQLSPEVCF
Trigger: GAAGCATACTTCGGGGGACAGCTGGTAAGCAGTCCAAATCCAGGACCACGAGATAGCTGTACTTTCAAGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CCA 72 bp CTTGGAAAACTTGAAAGTACAGCTATCTCGTGGTCCTaGATTTGGACTGCTTACCAGCTGTCCCCCGAAGTA +
Preference number: 6 (lower is better)
Translates to: LGKLESTAISWS*IWTAYQLSPEV
Trigger: TACTTCGGGGGACAGCTGGTAAGCAGTCCAAATCCAGGACCACGAGATAGCTGTACTTTCAAGTTTTCCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CCA 72 bp TTGAGGATGCTTGTGTTAGTGTCCAGCAGAAGCAATTaGCCATTCTCCACTGTGACGTTGTCGCCATCTTGT +
Preference number: 6 (lower is better)
Translates to: LRMLVLVSSRSN*PFSTVTLSPSC
Trigger: ACAAGATGGCGACAACGTCACAGTGGAGAATGGCCAATTGCTTCTGCTGGACACTAACACAAGCATCCTCAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CCA 72 bp GGAAGGACTGAACGATCACTCTGGCTCCCATATCCCTaGATCCTAGCATCTTCTCACTCATGGAATACAAAC +
Preference number: 6 (lower is better)
Translates to: GRTERSLWLPYP*ILASSHSWNTN
Trigger: GTTTGTATTCCATGAGTGAGAAGATGCTAGGATCCAGGGATATGGGAGCCAGAGTGATCGTTCAGTCCTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CCA 72 bp GGGCCAAGTGAATGGAAACACCTGAGCGTATTTCAATaGGCTCCTCTCCTTGTAGGACAACATACAAGAGGT +
Preference number: 6 (lower is better)
Translates to: GPSEWKHLSVFQ*APLLVGQHTRG
Trigger: ACCTCTTGTATGTTGTCCTACAAGGAGAGGAGCCCATTGAAATACGCTCAGGTGTTTCCATTCACTTGGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS CCA 72 bp GGCAATTGCGCTTTCTTTTTGCTCTACTGTCAGCAATaGCCTTTAAGGTCTCTTCATGGCCAGGCATCTCGT +
Preference number: 6 (lower is better)
Translates to: GNCAFFLLYCQQ*PLRSLHGQASR
Trigger: ACGAGATGCCTGGCCATGAAGAGACCTTAAAGGCCATTGCTGACAGTAGAGCAAAAAGAAAGCGCAATTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS CAA 72 bp CACCACCATGTTCACGTTCACCAGGTGTATCTCCAATaGAGAGCCATTGTTGGGGTAAAGAACACCCAACTC +
Preference number: 6 (lower is better)
Translates to: HHHVHVHQVYLQ*RAIVGVKNTQL
Trigger: GAGTTGGGTGTTCTTTACCCCAACAATGGCTCTCAATTGGAGATACACCTGGTGAACGTGAACATGGTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CAA 72 bp ACAGGCCACAGAATACCAATTCGACCTCCTCTTGGATaGGAGGGAGCTCTATCTGTTGATGTCAAGTTGGCT +
Preference number: 6 (lower is better)
Translates to: TGHRIPIRPPLG*EGALSVDVKLA
Trigger: AGCCAACTTGACATCAACAGATAGAGCTCCCTCCAATCCAAGAGGAGGTCGAATTGGTATTCTGTGGCCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CAA 90 bp CTTCTGTCCACAGGGAAGTCTAAGGTCCCCATCACATACAGCCCTTaGAAGAATGGAAGATCTGTATCCACAAGGACAGTTCTGTTGGGT +
Preference number: 6 (lower is better)
Translates to: LLSTGKSKVPITYSP*KNGRSVSTRTVLLG
Trigger: ACCCAACAGAACTGTCCTTGTGGATACAGATCTTCCATTCTTCAAAGGGCTGTATGTGATGGGGACCTTAGACTTCCCTGTGGACAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CAA 90 bp ATGGTCGACTTCTCCTTCCTAGTCACAGGCAAGACAGCAAATGGCTaGGATCGAGCTGTAAAATTGACTCCTGGAGGAGAAGTGACAGTA +
Preference number: 6 (lower is better)
Translates to: MVDFSFLVTGKTANG*DRAVKLTPGGEVTV
Trigger: TACTGTCACTTCTCCTCCAGGAGTCAATTTTACAGCTCGATCCAAGCCATTTGCTGTCTTGCCTGTGACTAGGAAGGAGAAGTCGACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS TCA 72 bp TTTCCCCCTGGGTGGAACTTTGCACTGAATTCTGCTTaGATTGCTTGTAGCGACATTGATGGCACACGAGTA +
Preference number: 6 (lower is better)
Translates to: FPPGWNFALNSA*IACSDIDGTRV
Trigger: TACTCGTGTGCCATCAATGTCGCTACAAGCAATTCAAGCAGAATTCAGTGCAAAGTTCCACCCAGGGGGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS TCA 72 bp ATGCGTCCATCTTTCCCCCTGGGTGGAACTTTGCACTaGATTCTGCTTGAATTGCTTGTAGCGACATTGATG +
Preference number: 6 (lower is better)
Translates to: MRPSFPLGGTLH*ILLELLVATLM
Trigger: CATCAATGTCGCTACAAGCAATTCAAGCAGAATTCAGTGCAAAGTTCCACCCAGGGGGAAAGATGGACGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS TCA 72 bp TTTCTAAAGTACCAACTTTCAGCTCCCCGCCTGCAATaGCCATGCATGCCACACTCAGAACATTGCTTCTGT +
Preference number: 6 (lower is better)
Translates to: FLKYQLSAPRLQ*PCMPHSEHCFC
Trigger: ACAGAAGCAATGTTCTGAGTGTGGCATGCATGGTCATTGCAGGCGGGGAGCTGAAAGTTGGTACTTTAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS TCA 72 bp CCCACAAACAGTCTCCCCCTACATGATACGTCAGGCTaGATTTGTATATTTCGGGTCAACAGTCCAACCTCA +
Preference number: 6 (lower is better)
Translates to: PTNSLPLHDTSG*ICIFRVNSPTS
Trigger: TGAGGTTGGACTGTTGACCCGAAATATACAAATTCAGCCTGACGTATCATGTAGGGGGAGACTGTTTGTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS TCA 72 bp CTTCCTGAAGGACCCCACAAACAGTCTCCCCCTACATaGTACGTCAGGCTGAATTTGTATATTTCGGGTCAA +
Preference number: 6 (lower is better)
Translates to: LPEGPHKQSPPT*YVRLNLYISGQ
Trigger: TTGACCCGAAATATACAAATTCAGCCTGACGTATCATGTAGGGGGAGACTGTTTGTGGGGTCCTTCAGGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS GCA 72 bp GGTAATTGGCTGATTGGGCGTCTCACACTCCATCTCTaGCTCAGTTTCCATGGTAATGTTACAGGAGCTATT +
Preference number: 6 (lower is better)
Translates to: GNWLIGRLTLHL*LSFHGNVTGAI
Trigger: AATAGCTCCTGTAACATTACCATGGAAACTGAGGCAGAGATGGAGTGTGAGACGCCCAATCAGCCAATTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CCA 72 bp AAGATGGCCATTATCCGAGGCATCACTGCAAATTGCTaGAGCACCACAGACATATTAGCAAATCCCATCTGC +
Preference number: 6 (lower is better)
Translates to: KMAIIRGITANC*STTDILANPIC
Trigger: GCAGATGGGATTTGCTAATATGTCTGTGGTGCTCCAGCAATTTGCAGTGATGCCTCGGATAATGGCCATCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CCA 72 bp ACAGCATCTTCTAAAGCCAGCACTGTGTCTAGGGCATaGGCAGTTGCTCTAAGACAGGTGACAATTACTTCT +
Preference number: 6 (lower is better)
Translates to: TASSKASTVSRA*AVALRQVTITS
Trigger: AGAAGTAATTGTCACCTGTCTTAGAGCAACTGCCCATGCCCTAGACACAGTGCTGGCTTTAGAAGATGCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CCA 72 bp TATAACATTGGTGGGACTGCAGATATAGATGCCAGATaGTGTCAACATTTCAGGATTGGAGAGTCCCTCGGC +
Preference number: 6 (lower is better)
Translates to: YNIGGTADIDAR*CQHFRIGESLG
Trigger: GCCGAGGGACTCTCCAATCCTGAAATGTTGACACCATCTGGCATCTATATCTGCAGTCCCACCAATGTTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CCA 72 bp AAGCCAAGTCTCTCTGATCCTGCCACAACGTTGCCATaGAGGTTGATGTCCTTTACCTGGTTCACTTTGATT +
Preference number: 6 (lower is better)
Translates to: KPSLSDPATTLP*RLMSFTWFTLI
Trigger: AATCAAAGTGAACCAGGTAAAGGACATCAACCTCCATGGCAACGTTGTGGCAGGATCAGAGAGACTTGGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CAA 72 bp AGACATATTAGCAAATCCCATCTGCTTCTGACGTACTaGGAGAGGATAGATGCCAGCCTCCAGACTGTGAAG +
Preference number: 6 (lower is better)
Translates to: RHISKSHLLLTY*ERIDASLQTVK
Trigger: CTTCACAGTCTGGAGGCTGGCATCTATCCTCTCCAAGTACGTCAGAAGCAGATGGGATTTGCTAATATGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CAA 72 bp TGGGAAGATGGCCATTATCCGAGGCATCACTGCAAATaGCTGGAGCACCACAGACATATTAGCAAATCCCAT +
Preference number: 6 (lower is better)
Translates to: WEDGHYPRHHCK*LEHHRHISKSH
Trigger: ATGGGATTTGCTAATATGTCTGTGGTGCTCCAGCAATTTGCAGTGATGCCTCGGATAATGGCCATCTTCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CAA 90 bp TCTGTATCCTGCACAGTTTCCACAGTGACAATCTCTTCCATCGGTTaGGCACCTTTAACACCTGTTCCACTGATGATGACAACTTCATCC +
Preference number: 6 (lower is better)
Translates to: SVSCTVSTVTISSIG*APLTPVPLMMTTSS
Trigger: GGATGAAGTTGTCATCATCAGTGGAACAGGTGTTAAAGGTGCCAAACCGATGGAAGAGATTGTCACTGTGGAAACTGTGCAGGATACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CAA 90 bp AGTTGTCAAGTCCACTTTCCTTATAGAGATGAAGGCCATGAAGACTaGAATGCGCCACATTGTCAGACCAAAGCAGTTCACAAGAGGAGC +
Preference number: 6 (lower is better)
Translates to: SCQVHFPYRDEGHED*NAPHCQTKAVHKRS
Trigger: GCTCCTCTTGTGAACTGCTTTGGTCTGACAATGTGGCGCATTCAAGTCTTCATGGCCTTCATCTCTATAAGGAAAGTGGACTTGACAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS TCA 72 bp ATCTGGGCCACTGCAAAGGTTAAGATGTCATCGCTCTaGGAAATAGAGATCAATTCTGGGGTAAAGGCCTTG +
Preference number: 6 (lower is better)
Translates to: IWATAKVKMSSL*EIEINSGVKAL
Trigger: CAAGGCCTTTACCCCAGAATTGATCTCTATTTCTCAGAGCGATGACATCTTAACCTTTGCAGTGGCCCAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS TCA 72 bp AAGAACGGTGTGGTTACCAGAGACACCCACACAGGGTaGCATTCCTATAAAAATGTCAATGTTTGCAGCTCC +
Preference number: 6 (lower is better)
Translates to: KNGVVTRDTHTG*HSYKNVNVCSS
Trigger: GGAGCTGCAAACATTGACATTTTTATAGGAATGTCACCCTGTGTGGGTGTCTCTGGTAACCACACCGTTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS TCA 72 bp GACCATACCTGGTACAAGAATGTGCAATGTTCTGAGTaGAGGAAAGAAGCGGAGCTTGTGATGTTTGGTTGG +
Preference number: 6 (lower is better)
Translates to: DHTWYKNVQCSE*RKEAELVMFGW
Trigger: CCAACCAAACATCACAAGCTCCGCTTCTTTCCTTCACTCAGAACATTGCACATTCTTGTACCAGGTATGGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS TCA 72 bp CTTCACAGTAAATCCACCTTGTCCTTGGGAACAGTCTaGACAGGTTCTAATGGCCACACAGTTGATGAGATC +
Preference number: 6 (lower is better)
Translates to: LHSKSTLSLGTV*TGSNGHTVDEI
Trigger: GATCTCATCAACTGTGTGGCCATTAGAACCTGTTCAGACTGTTCCCAAGGACAAGGTGGATTTACTGTGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS TCA 72 bp TTGGGGGTGAAGCCCTATGTGAGTTCATTTCCATCATaGGAGGCCTACGTTGACCAACTCTTCTATAATGAC +
Preference number: 6 (lower is better)
Translates to: LGVKPYVSSFPS*EAYVDQLFYND
Trigger: GTCATTATAGAAGAGTTGGTCAACGTAGGCCTCTCATGATGGAAATGAACTCACATAGGGCTTCACCCCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS GCA 72 bp AAGAAAAACTCCACCATCATATACCACACGCGTGGCTaGAGCAGGATTCACTCCAGTAAGGTTTTCATCAGA +
Preference number: 6 (lower is better)
Translates to: KKNSTIIYHTRG*SRIHSSKVFIR
Trigger: TCTGATGAAAACCTTACTGGAGTGAATCCTGCTGCAGCCACGCGTGTGGTATATGATGGTGGAGTTTTTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS GCA 72 bp GTATTGTTGTATCCTCCCCAGCCTTCTTCAACACCTTaGCATGTTTCAGGGAGGGACCATTTTAAAGCTGAT +
Preference number: 6 (lower is better)
Translates to: VLLYPPQPSSTP*HVSGRDHFKAD
Trigger: ATCAGCTTTAAAATGGTCCCTCCCTGAAACATGGCAAGGTGTTGAAGAAGGCTGGGGAGGATACAACAATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS GCA 72 bp CAAAGCCTGCTCAGTGGTTACTGCGTTGAAGAAGGATaGAGTCCATTCTGCCTCTGTTTTAGGAAATACAGA +
Preference number: 6 (lower is better)
Translates to: QSLLSGYCVEEG*SPFCLCFRKYR
Trigger: TCTGTATTTCCTAAAACAGAGGCAGAATGGACTGCATCCTTCTTCAACGCAGTAACCACTGAGCAGGCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS GCA 72 bp CCTGCTGCCTCATTAATCTTTCAAAGTTCAGCTTCCTaGAGGCTCCTCCTCTATTCTGAAATCTTCAAAGCC +
Preference number: 6 (lower is better)
Translates to: PAASLIFQSSAS*RLLLYSEIFKA
Trigger: GGCTTTGAAGATTTCAGAATAGAGGAGGAGCCTGCAGGAAGCTGAACTTTGAAAGATTAATGAGGCAGCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340994.4
CDS CAA 72 bp TGCACAGTTTCCACAGTGACAATCTCTTCCATCGGTTaGGCACCTTTAACACCTGTTCCACTGATGATGACA +
Preference number: 6 (lower is better)
Translates to: CTVSTVTISSIG*APLTPVPLMMT
Trigger: TGTCATCATCAGTGGAACAGGTGTTAAAGGTGCCAAACCGATGGAAGAGATTGTCACTGTGGAAACTGTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CAA 72 bp CTCTACTCTTCGATTCTGCTCATCCAAAAATACCAATaGTGGCTGCACTGGAAGCTCATTTCCCACTTCTCC +
Preference number: 6 (lower is better)
Translates to: LYSSILLIQKYQ*WLHWKLISHFS
Trigger: GGAGAAGTGGGAAATGAGCTTCCAGTGCAGCCACAATTGGTATTTTTGGATGAGCAGAATCGAAGAGTAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS CAA 72 bp ATTCTCATATCTTCTCCCACCACAGTGTCTTCTTTTTaGGGCCCTTGTGATTCTCGGCGTTTGGATGAGATG +
Preference number: 6 (lower is better)
Translates to: ILISSPTTVSSF*GPCDSRRLDEM
Trigger: CATCTCATCCAAACGCCGAGAATCACAAGGGCCCAAAAAAGAAGACACTGTGGTGGGAGAAGATATGAGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS CAA 90 bp GGTCCTCGTGAGACTCCAGTCACAGGTGGTATTCTTTACCATGTTTaGAAAGCCGATTGTGAAGGACACAATCATCTTCAGGATCTTGTT +
Preference number: 6 (lower is better)
Translates to: GPRETPVTGGILYHV*KADCEGHNHLQDLV
Trigger: AACAAGATCCTGAAGATGATTGTGTCCTTCACAATCGGCTTTCAAAACATGGTAAAGAATACCACCTGTGACTGGAGTCTCACGAGGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS TCA 72 bp AACAGAGTGGTGCCAGTGACATTATCCCAAGGTGGCTaGAATTTAGGGTATACAAAGAGACCATACCTGGTA +
Preference number: 6 (lower is better)
Translates to: NRVVPVTLSQGG*NLGYTKRPYLV
Trigger: TACCAGGTATGGTCTCTTTGTATACCCTAAATTTCAGCCACCTTGGGATAATGTCACTGGCACCACTCTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS TCA 72 bp CAAGAAGCTGAAAGGGTTTCCATAGAAGCAAGAATGTaGCTTCTGTTTTTCCCAGACAGAGACCCATCCAAG +
Preference number: 6 (lower is better)
Translates to: QEAERVSIEARM*LLFFPDRDPSK
Trigger: CTTGGATGGGTCTCTGTCTGGGAAAAACAGAAGTCACATTCTTGCTTCTATGGAAACCCTTTCAGCTTCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS TCA 72 bp ATGGCCTTTAAGGTCTCTTCATGGCCAGGCATCTCGTaGATAAACCTGATTTGGTTTTGGCCAATCTGTAAG +
Preference number: 6 (lower is better)
Translates to: MAFKVSSWPGIS*INLIWFWPICK
Trigger: CTTACAGATTGGCCAAAACCAAATCAGGTTTATTCACGAGATGCCTGGCCATGAAGAGACCTTAAAGGCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS GCA 72 bp CTTCGATTCTGCTCATCCAAAAATACCAATTGTGGCTaGACTGGAAGCTCATTTCCCACTTCTCCATCTGAA +
Preference number: 6 (lower is better)
Translates to: LRFCSSKNTNCG*TGSSFPTSPSE
Trigger: TTCAGATGGAGAAGTGGGAAATGAGCTTCCAGTGCAGCCACAATTGGTATTTTTGGATGAGCAGAATCGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS CCA 72 bp CAAATGGCATCAGCGCTATCAAGAATTAGGACCACTTaGTCAGTCTGTTTGCAGATGAATCCTTGCATCAGA +
Preference number: 6 (lower is better)
Translates to: QMASALSRIRTT*SVCLQMNPCIR
Trigger: TCTGATGCAAGGATTCATCTGCAAACAGACTGACCAAGTGGTCCTAATTCTTGATAGCGCTGATGCCATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS CCA 72 bp TACTCTTCGATTCTGCTCATCCAAAAATACCAATTGTaGCTGCACTGGAAGCTCATTTCCCACTTCTCCATC +
Preference number: 6 (lower is better)
Translates to: YSSILLIQKYQL*LHWKLISHFSI
Trigger: GATGGAGAAGTGGGAAATGAGCTTCCAGTGCAGCCACAATTGGTATTTTTGGATGAGCAGAATCGAAGAGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS CAA 72 bp AGCCGGAGAAGGATGTTAGACCAAAGGGGTTCCAGTTaGCATTTTACTGCAAGTAACTCCTCAATGGTTGTT +
Preference number: 6 (lower is better)
Translates to: SRRRMLDQRGSS*HFTASNSSMVV
Trigger: AACAACCATTGAGGAGTTACTTGCAGTAAAATGCAAACTGGAACCCCTTTGGTCTAACATCCTTCTCCGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CAA 72 bp AAGCCGATTGTGAAGGACACAATCATCTTCAGGATCTaGTTCATGTGGCCTTTGTATGCAAGACACAGGTGT +
Preference number: 6 (lower is better)
Translates to: KPIVKDTIIFRI*FMWPLYARHRC
Trigger: ACACCTGTGTCTTGCATACAAAGGCCACATGAACAAGATCCTGAAGATGATTGTGTCCTTCACAATCGGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS TCA 72 bp AGACTCCAGTCACAGGTGGTATTCTTTACCATGTTTTaGAAGCCGATTGTGAAGGACACAATCATCTTCAGG +
Preference number: 6 (lower is better)
Translates to: RLQSQVVFFTMF*KPIVKDTIIFR
Trigger: CCTGAAGATGATTGTGTCCTTCACAATCGGCTTTCAAAACATGGTAAAGAATACCACCTGTGACTGGAGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS TCA 72 bp AGTTGTCAAAGGTTGCTGAGTACTGCAGAGATCTGTTaGTCCAAAGGTTCTCAGATTGCAATGAGTAGGTCT +
Preference number: 6 (lower is better)
Translates to: SCQRLLSTAEIC*SKGSQIAMSRS
Trigger: AGACCTACTCATTGCAATCTGAGAACCTTTGGATCAACAGATCTCTGCAGTACTCAGCAACCTTTGACAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS TCA 72 bp GCACCAATAGATTCATTCAGCAATAAGGAAGCTGACTaGACCAGAGTGGGTGGAATAAAACTTTCCCCTAAG +
Preference number: 6 (lower is better)
Translates to: APIDSFSNKEAD*TRVGGIKLSPK
Trigger: CTTAGGGGAAAGTTTTATTCCACCCACTCTGGTTCAGTCAGCTTCCTTATTGCTGAATGAATCTATTGGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS GCA 72 bp AAAATAACTTTGCAACTCGTTTTGTTCACTGTAACCTaGAAGAACTGGGAGTCACCAGAGAAACCAGTTCCG +
Preference number: 6 (lower is better)
Translates to: KITLQLVLFTVT*KNWESPEKPVP
Trigger: CGGAACTGGTTTCTCTGGTGACTCCCAGTTCTTGCAGGTTACAGTGAACAAAACGAGTTGCAAAGTTATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS GCA 72 bp ATCTTTAGCATCCTGGTCCTCTCTGCTGTTATTGGGTaGATAATTCCACTGTTCTCTGCATTTGGTAGAATG +
Preference number: 6 (lower is better)
Translates to: IFSILVLSAVIG*IIPLFSAFGRM
Trigger: CATTCTACCAAATGCAGAGAACAGTGGAATTATGCACCCAATAACAGCAGAGAGGACCAGGATGCTAAAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CCA 72 bp GTTCCAGTTTGCATTTTACTGCAAGTAACTCCTCAATaGTTGTTTGAATCAGATGGGCTGTGGCATTTGCAG +
Preference number: 6 (lower is better)
Translates to: VPVCILLQVTPQ*LFESDGLWHLQ
Trigger: CTGCAAATGCCACAGCCCATCTGATTCAAACAACCATTGAGGAGTTACTTGCAGTAAAATGCAAACTGGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CAA 72 bp ATGAAAATCAGCTTGCCCCCTTTAATGTGCAGTAAGTaGAGGATGCTTGTGTTAGTGTCCAGCAGAAGCAAT +
Preference number: 6 (lower is better)
Translates to: MKISLPPLMCSK*RMLVLVSSRSN
Trigger: ATTGCTTCTGCTGGACACTAACACAAGCATCCTCAACTTACTGCACATTAAAGGGGGCAAGCTGATTTTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CAA 72 bp TTTTCCCAGACAGAGACCCATCCAAGTCTTCCAAAATaGCTGCATGAGGAAATGGAAATGCCACTAAGTTTG +
Preference number: 6 (lower is better)
Translates to: FSQTETHPSLPK*LHEEMEMPLSL
Trigger: CAAACTTAGTGGCATTTCCATTTCCTCATGCAGCAATTTTGGAAGACTTGGATGGGTCTCTGTCTGGGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CAA 90 bp CATCTGCCTATTTATAAGAGAGCAAGGAGTAACCCATTTGTCTCCTaGAGCTTCCAAGATCACTGGGCTATCAATGTACTCAGCATCAAA +
Preference number: 6 (lower is better)
Translates to: HLPIYKRARSNPFVS*SFQDHWAINVLSIK
Trigger: TTTGATGCTGAGTACATTGATAGCCCAGTGATCTTGGAAGCTCAAGGAGACAAATGGGTTACTCCTTGCTCTCTTATAAATAGGCAGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CAA 90 bp CAGACTACATTGGTCTGGTTTGAGAAAATAACTTTGCAACTCGTTTaGTTCACTGTAACCTGCAAGAACTGGGAGTCACCAGAGAAACCA +
Preference number: 6 (lower is better)
Translates to: QTTLVWFEKITLQLV*FTVTCKNWESPEKP
Trigger: TGGTTTCTCTGGTGACTCCCAGTTCTTGCAGGTTACAGTGAACAAAACGAGTTGCAAAGTTATTTTCTCAAACCAGACCAATGTAGTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CAA 90 bp CCTTGTCCTTGGGAACAGTCTGAACAGGTTCTAATGGCCACACAGTaGATGAGATCAAAATTAACAAAGGTTGTGTTAGACACCATCAGT +
Preference number: 6 (lower is better)
Translates to: PCPWEQSEQVLMATQ*MRSKLTKVVLDTIS
Trigger: ACTGATGGTGTCTAACACAACCTTTGTTAATTTTGATCTCATCAACTGTGTGGCCATTAGAACCTGTTCAGACTGTTCCCAAGGACAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CAA 90 bp GACTTCTGTTTTTCCCAGACAGAGACCCATCCAAGTCTTCCAAAATaGCTGCATGAGGAAATGGAAATGCCACTAAGTTTGAAGAGTTTG +
Preference number: 6 (lower is better)
Translates to: DFCFSQTETHPSLPK*LHEEMEMPLSLKSL
Trigger: CAAACTCTTCAAACTTAGTGGCATTTCCATTTCCTCATGCAGCAATTTTGGAAGACTTGGATGGGTCTCTGTCTGGGAAAAACAGAAGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS TCA 72 bp ATGAATTCCATTCATACGGTCACAAAAGACTCCCTCTaGGGCTCTAAGGAGAATCAGAAGCTTTTGTTCCTT +
Preference number: 6 (lower is better)
Translates to: MNSIHTVTKDSL*GSKENQKLLFL
Trigger: AAGGAACAAAAGCTTCTGATTCTCCTTAGAGCCTCAGAGGGAGTCTTTTGTGACCGTATGAATGGAATTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS TCA 72 bp TCTCTACATGTAACATGGCACCATAGTCAAAGTTCTTaGAAGCCAAGAAGCCAGAGATTCTGGTACAGTTGT +
Preference number: 6 (lower is better)
Translates to: SLHVTWHHSQSS*KPRSQRFWYSC
Trigger: ACAACTGTACCAGAATCTCTGGCTTCTTGGCTTTCAAGAACTTTGACTATGGTGCCATGTTACATGTAGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS GCA 72 bp CTGTTCTTCTCTAAATGTACCTGCGTTGAAGAAGGATaGAGTCCATTCTGCCTCTGTTTTAGGAAATACAGA +
Preference number: 6 (lower is better)
Translates to: LFFSKCTCVEEG*SPFCLCFRKYR
Trigger: TCTGTATTTCCTAAAACAGAGGCAGAATGGACTGCATCCTTCTTCAACGCAGGTACATTTAGAGAAGAACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS CCA 72 bp ATTTCAGGATTGGAGAGTCCCTCGGCACCAGAAACCTaGATGATCACGTTGTTTCTTATTATATTTCCATGT +
Preference number: 6 (lower is better)
Translates to: ISGLESPSAPET*MITLFLIIFPC
Trigger: ACATGGAAATATAATAAGAAACAACGTGATCATCCAGGTTTCTGGTGCCGAGGGACTCTCCAATCCTGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CCA 72 bp AATGCCACTAAGTTTGAAGAGTTTGTAAACTTCAACTaGCTGGTCTTCACAGTAAATCCACCTTGTCCTTGG +
Preference number: 6 (lower is better)
Translates to: NATKFEEFVNFN*LVFTVNPPCPW
Trigger: CCAAGGACAAGGTGGATTTACTGTGAAGACCAGCCAGTTGAAGTTTACAAACTCTTCAAACTTAGTGGCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CAA 72 bp ATTTATAAGAGAGCAAGGAGTAACCCATTTGTCTCCTaGAGCTTCCAAGATCACTGGGCTATCAATGTACTC +
Preference number: 6 (lower is better)
Translates to: IYKRARSNPFVS*SFQDHWAINVL
Trigger: GAGTACATTGATAGCCCAGTGATCTTGGAAGCTCAAGGAGACAAATGGGTTACTCCTTGCTCTCTTATAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS CAA 72 bp GCGCTATCAAGAATTAGGACCACTTGGTCAGTCTGTTaGCAGATGAATCCTTGCATCAGAAATTGGTATGTA +
Preference number: 6 (lower is better)
Translates to: ALSRIRTTWSVC*QMNPCIRNWYV
Trigger: TACATACCAATTTCTGATGCAAGGATTCATCTGCAAACAGACTGACCAAGTGGTCCTAATTCTTGATAGCGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS CAA 90 bp ATGGCATCAGCGCTATCAAGAATTAGGACCACTTGGTCAGTCTGTTaGCAGATGAATCCTTGCATCAGAAATTGGTATGTACATTTCTGT +
Preference number: 6 (lower is better)
Translates to: MASALSRIRTTWSVC*QMNPCIRNWYVHFC
Trigger: ACAGAAATGTACATACCAATTTCTGATGCAAGGATTCATCTGCAAACAGACTGACCAAGTGGTCCTAATTCTTGATAGCGCTGATGCCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS CAA 90 bp TGTGGAGCAGAAAATACATACACTACTGCCAAAAGACCAATAGTATaGTCTACCAGAGTAATGTTCTCTATCTCCACGCTGTTCTCTACA +
Preference number: 6 (lower is better)
Translates to: CGAENTYTTAKRPIV*STRVMFSISTLFST
Trigger: TGTAGAGAACAGCGTGGAGATAGAGAACATTACTCTGGTAGACAATACTATTGGTCTTTTGGCAGTAGTGTATGTATTTTCTGCTCCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS TCA 72 bp AAGATCCGATGCATTCCAACAGGTAGCAAATCTGTCTaGCAGACTACATTGGTCTGGTTTGAGAAAATAACT +
Preference number: 6 (lower is better)
Translates to: KIRCIPTGSKSV*QTTLVWFEKIT
Trigger: AGTTATTTTCTCAAACCAGACCAATGTAGTCTGTCAGACAGATTTGCTACCTGTTGGAATGCATCGGATCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS GCA 72 bp AGGACCACTTGGTCAGTCTGTTTGCAGATGAATCCTTaGATCAGAAATTGGTATGTACATTTCTGTTCTTCT +
Preference number: 6 (lower is better)
Translates to: RTTWSVCLQMNP*IRNWYVHFCSS
Trigger: AGAAGAACAGAAATGTACATACCAATTTCTGATGCAAGGATTCATCTGCAAACAGACTGACCAAGTGGTCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8
CDS CAA 72 bp TGGGAACAGTCTGAACAGGTTCTAATGGCCACACAGTaGATGAGATCAAAATTAACAAAGGTTGTGTTAGAC +
Preference number: 6 (lower is better)
Translates to: WEQSEQVLMATQ*MRSKLTKVVLD
Trigger: GTCTAACACAACCTTTGTTAATTTTGATCTCATCAACTGTGTGGCCATTAGAACCTGTTCAGACTGTTCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS TCA 72 bp AGGTGGTATTCTTTACCATGTTTTGAAAGCCGATTGTaGAGGACACAATCATCTTCAGGATCTTGTTCATGT +
Preference number: 6 (lower is better)
Translates to: RWYSLPCFESRL*RTQSSSGSCSC
Trigger: ACATGAACAAGATCCTGAAGATGATTGTGTCCTTCACAATCGGCTTTCAAAACATGGTAAAGAATACCACCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340994.4
ENST00000371117.8
CDS TCA 72 bp AAACCACTAGTCACAGATACAACTGGATATAACTTCTaGATTGCCCAAATGGCATCAGCGCTATCAAGAATT +
Preference number: 6 (lower is better)
Translates to: KPLVTDTTGYNF*IAQMASALSRI
Trigger: AATTCTTGATAGCGCTGATGCCATTTGGGCAATTCAGAAGTTATATCCAGTTGTATCTGTGACTAGTGGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371117.8