RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PIP5K1B (Homo sapiens)

Ensembl gene IDs: ENSG00000107242

Ensembl transcript IDs: ENST00000265382.8, ENST00000377284.5, ENST00000437200.5, ENST00000440050.5, ENST00000472907.6, ENST00000474356.1, ENST00000478500.3, ENST00000541509.5

Found 265 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GTATTTTTCACATCCCATCTGCTGATCAGCCTGAAGTTGACATCTTaGAAACTCTTAAGTCAGGTTGATGATTTCTCTGTGTGTAGTGGG +
Preference number: 1 (lower is better)
Translates to: VFFTSHLLISLKLTS*KLLSQVDDFSVCSG
Trigger: CCCACTACACACAGAGAAATCATCAACCTGACTTAAGAGTTTTCAAGATGTCAACTTCAGGCTGATCAGCAGATGGGATGTGAAAAATAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
3UTR-3UTR TCA 90 bp TTCCAGAGTGTTGGGCTCAGCGGTCAAGTAGATGGTCCCCTCTTCCAAGGTAAAACTGAAGAACTAGGCTaGACCTTCTCATCTGGCAAA +
Preference number: 2 (lower is better)
Translates to: FQSVGLSGQVDGPLFQGKTEELG*TFSSGK
Trigger: TTTGCCAGATGAGAAGGTTCAGCCTAGTTCTTCAGT...TTTACCTTGGAAGAGGGGACCATCTACTTGACCGCTGAGCCCAACACTCTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478500.3
3UTR-3UTR TCA 90 bp TTCCAGAGTGTTGGGCTCAGCGGTCAAGTAGATGGTCCCCTCTTCCAAGGTAAACTGAAGTTGACATCTTaGAAACTCTTAAGTCAGGTT +
Preference number: 2 (lower is better)
Translates to: FQSVGLSGQVDGPLFQGKLKLTS*KLLSQV
Trigger: AACCTGACTTAAGAGTTTTCAAGATGTCAACTTCAG...TTTACCTTGGAAGAGGGGACCATCTACTTGACCGCTGAGCCCAACACTCTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478500.3
3UTR-3UTR GCA 90 bp TTCCAGAGTGTTGGGCTCAGCGGTCAAGTAGATGGTCCCCTCTTCCAAGGTAAACTTAAATATAGTTCATaGAGTTCTTCACAGTTCAGC +
Preference number: 2 (lower is better)
Translates to: FQSVGLSGQVDGPLFQGKLKYSS*SSSQFS
Trigger: GCTGAACTGTGAAGAACTGCATGAACTATATTTAAG...TTTACCTTGGAAGAGGGGACCATCTACTTGACCGCTGAGCCCAACACTCTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478500.3
3UTR-3UTR CCA 90 bp GTGGATAATTCTGGTGCGGAGAAACTTCTCTGCCATAACTGTGCTCACGTCTCAAAAGGTGATTGGCAATaGTACAGAAAGCAGCTTAAA +
Preference number: 2 (lower is better)
Translates to: VDNSGAEKLLCHNCAHVSKGDWQ*YRKQLK
Trigger: TTTAAGCTGCTTTCTGTACCATTGCCAATCACCTTT...TGAGACGTGAGCACAGTTATGGCAGAGAAGTTTCTCCGCACCAGAATTATCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
3UTR-3UTR CCA 90 bp ATTTTTCACATCCCATCTGCTGATCAGCCTGAAGTTGACATCTTGAAAACTCTTTCAGCCAAGTTGCTGTaGATAATTCTGGTGCGGAGA +
Preference number: 2 (lower is better)
Translates to: IFHIPSADQPEVDILKTLSAKLL*IILVRR
Trigger: TCTCCGCACCAGAATTATCCACAGCAACTTGGCTGA...AAGAGTTTTCAAGATGTCAACTTCAGGCTGATCAGCAGATGGGATGTGAAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
3UTR-3UTR CCA 90 bp CTGGAAGGTAACCCTTTGCTCCATACTATATCCAGATTTTGTTCATTTTCCTTATCAGCCAAGTTGCTGTaGATAATTCTGGTGCGGAGA +
Preference number: 2 (lower is better)
Translates to: LEGNPLLHTISRFCSFSLSAKLL*IILVRR
Trigger: TCTCCGCACCAGAATTATCCACAGCAACTTGGCTGA...TAAGGAAAATGAACAAAATCTGGATATAGTATGGAGCAAAGGGTTACCTTCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478500.3
3UTR-3UTR CCA 90 bp ACTTCCAACTCCAAAAAGGTGATTGGCAATGGTACAGAAAGCAGCTTAAATATACTCCAAAAAGGTGATTaGCAATGGTACAGAAAGCAG +
Preference number: 2 (lower is better)
Translates to: TSNSKKVIGNGTESSLNILQKGD*QWYRKQ
Trigger: CTGCTTTCTGTACCATTGCCAATCACCTTTTTGGAG...TATATTTAAGCTGCTTTCTGTACCATTGCCAATCACCTTTTTGGAGTTGGAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
3UTR-3UTR TCA 90 bp ACTTCCAACTCCAAAAAGGTGATTGGCAATGGTACAGAAAGCAGCTTAAATATACATTTCCTTCTGATATaGATAACAGGTGCTCAGATG +
Preference number: 2 (lower is better)
Translates to: TSNSKKVIGNGTESSLNIHFLLI*ITGAQM
Trigger: CATCTGAGCACCTGTTATTCATATCAGAAGGAAATG...TATATTTAAGCTGCTTTCTGTACCATTGCCAATCACCTTTTTGGAGTTGGAAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478500.3
3UTR-3UTR GCA 90 bp ACTTCCAACTCCAAAAAGGTGATTGGCAATGGTACAGAAAGCAGCTTAAATATATGGAAGGTAACCCTTTaGTCCATACTATATCCAGAT +
Preference number: 2 (lower is better)
Translates to: TSNSKKVIGNGTESSLNIWKVTL*SILYPD
Trigger: ATCTGGATATAGTATGGAGCAAAGGGTTACCTTCCA...TATATTTAAGCTGCTTTCTGTACCATTGCCAATCACCTTTTTGGAGTTGGAAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478500.3
3UTR-3UTR GCA 90 bp ACTTCCAACTCCAAAAAGGTGATTGGCAATGGTACAGAAAGCAGCTTAAATATAGATATGAATAACAGGTaGTCAGATGGATTGAGCATA +
Preference number: 2 (lower is better)
Translates to: TSNSKKVIGNGTESSLNIDMNNR*SDGLSI
Trigger: TATGCTCAATCCATCTGAGCACCTGTTATTCATATC...TATATTTAAGCTGCTTTCTGTACCATTGCCAATCACCTTTTTGGAGTTGGAAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478500.3
3UTR-3UTR CCA 90 bp ACTTCCAACTCCAAAAAGGTGATTGGCAATGGTACAGAAAGCAGCTTAAATATAAAAGGTGATTGGCAATaGTACAGAAAGCAGCTTAAA +
Preference number: 2 (lower is better)
Translates to: TSNSKKVIGNGTESSLNIKGDWQ*YRKQLK
Trigger: TTTAAGCTGCTTTCTGTACCATTGCCAATCACCTTT...TATATTTAAGCTGCTTTCTGTACCATTGCCAATCACCTTTTTGGAGTTGGAAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
3UTR-3UTR GCA 90 bp ACTTCCAACTCCAAAAAGGTGATTGGCAATGGTACAGAAAGCAGCTTAAATATACTTAAATATAGTTCATaGAGTTCTTCACAGTTCAGC +
Preference number: 2 (lower is better)
Translates to: TSNSKKVIGNGTESSLNILKYSS*SSSQFS
Trigger: GCTGAACTGTGAAGAACTGCATGAACTATATTTAAG...TATATTTAAGCTGCTTTCTGTACCATTGCCAATCACCTTTTTGGAGTTGGAAGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
3UTR-3UTR CAA 90 bp GTGGATAATTCTGGTGCGGAGAAACTTCTCTGCCATAACTGTGCTCACGTCTCACCTGAAGTTGACATCTaGAAAACTCTTAAGTCAGGT +
Preference number: 3 (lower is better)
Translates to: VDNSGAEKLLCHNCAHVSPEVDI*KTLKSG
Trigger: ACCTGACTTAAGAGTTTTCAAGATGTCAACTTCAGG...TGAGACGTGAGCACAGTTATGGCAGAGAAGTTTCTCCGCACCAGAATTATCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
3UTR-3UTR CAA 90 bp GTGGATAATTCTGGTGCGGAGAAACTTCTCTGCCATAACTGTGCTCACGTCTCAAATGTCCCACATGATTaGGGTTGCTTGATGTTTTTC +
Preference number: 3 (lower is better)
Translates to: VDNSGAEKLLCHNCAHVSNVPHD*GCLMFF
Trigger: GAAAAACATCAAGCAACCCAAATCATGTGGGACATT...TGAGACGTGAGCACAGTTATGGCAGAGAAGTTTCTCCGCACCAGAATTATCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478500.3
3UTR-3UTR CAA 90 bp CACTTCCAACTCCAAAAAGGTGATTGGCAATGGTACAGAAAGCAGCTTAAATATGATGGATTGAGCATATaGCCCAGGCTGGTCTTGAAC +
Preference number: 3 (lower is better)
Translates to: HFQLQKGDWQWYRKQLKYDGLSI*PRLVLN
Trigger: GTTCAAGACCAGCCTGGGCAATATGCTCAATCCATC...ATATTTAAGCTGCTTTCTGTACCATTGCCAATCACCTTTTTGGAGTTGGAAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478500.3
3UTR TCA 72 bp GGATGGTTTAAGTATGGAACCACTGAAGAACTAGGCTaGACCTTCTCATCTGGCAAAAGAGAAGGAAGTTTA +
Preference number: 3 (lower is better)
Translates to: GWFKYGTTEELG*TFSSGKREGSL
Trigger: TAAACTTCCTTCTCTTTTGCCAGATGAGAAGGTTCAGCCTAGTTCTTCAGTGGTTCCATACTTAAACCATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478500.3
3UTR-3UTR CAA 90 bp CACTTCCAACTCCAAAAAGGTGATTGGCAATGGTACAGAAAGCAGCTTAAATATCCTGAAGTTGACATCTaGAAAACTCTTAAGTCAGGT +
Preference number: 3 (lower is better)
Translates to: HFQLQKGDWQWYRKQLKYPEVDI*KTLKSG
Trigger: ACCTGACTTAAGAGTTTTCAAGATGTCAACTTCAGG...ATATTTAAGCTGCTTTCTGTACCATTGCCAATCACCTTTTTGGAGTTGGAAGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
3UTR TCA 72 bp AGAGTACTCATCAGGTATACTGCAGAATGTCCCACATaGTTTGGGTTGCTTGATGTTTTTCTGTATTTTTGG +
Preference number: 3 (lower is better)
Translates to: RVLIRYTAECPT*FGLLDVFLYFW
Trigger: CCAAAAATACAGAAAAACATCAAGCAACCCAAATCATGTGGGACATTCTGCAGTATACCTGATGAGTACTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000478500.3
CDS-3UTR CCA 90 bp GGTGCGGAGAAACTTCTCTGCCATAACTGTGCTCACGTCTCATCCATGTGCTTAGGCAGGTGCCGGGGCTaGAGCCGCGGGGCCAAACTC +
Preference number: 4 (lower is better)
Translates to: GAEKLLCHNCAHVSSMCLGRCRG*SRGAKL
Trigger: GAGTTTGGCCCCGCGGCTCCAGCCCCGGCACCTGCC...TAAGCACATGGATGAGACGTGAGCACAGTTATGGCAGAGAAGTTTCTCCGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265382.8
ENST00000541509.5
CDS-3UTR GCA 90 bp AGGTTGATGATTTCTCTGTGTGTAGTGGGGCTCAGCCAAGTTGCTGTGGATAATCGGGTTCCCGCTTGGTaGGCGCCGGAGTCGGAGCGA +
Preference number: 4 (lower is better)
Translates to: RLMISLCVVGLSQVAVDNRVPAW*APESER
Trigger: TCGCTCCGACTCCGGCGCGCACCAAGCGGGAACCCG...ATTATCCACAGCAACTTGGCTGAGCCCCACTACACACAGAGAAATCATCAACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265382.8
CDS-3UTR GCA 90 bp AAGTTGCTGTGGATAATTCTGGTGCGGAGAAACTTCTCTGCCATAACTGTGCTCGCTACGAGTGTGCAGTaGGCGCGCGCCGCGGCGAGT +
Preference number: 4 (lower is better)
Translates to: KLLWIILVRRNFSAITVLATSVQ*ARAAAS
Trigger: ACTCGCCGCGGCGCGCGCGCACTGCACACTCGTAGC...GAGCACAGTTATGGCAGAGAAGTTTCTCCGCACCAGAATTATCCACAGCAACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265382.8
ENST00000541509.5
CDS-3UTR GCA 90 bp AAGTTGCTGTGGATAATTCTGGTGCGGAGAAACTTCTCTGCCATAACTGTGCTCGCGAAGGGAGAGCAGTaGAGGCGAGGGGCGGGAGGG +
Preference number: 4 (lower is better)
Translates to: KLLWIILVRRNFSAITVLAKGEQ*RRGAGG
Trigger: CCCTCCCGCCCCTCGCCTGCACTGCTCTCCCTTCGC...GAGCACAGTTATGGCAGAGAAGTTTCTCCGCACCAGAATTATCCACAGCAACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265382.8
ENST00000541509.5
CDS-3UTR GCA 90 bp GTGGATAATTCTGGTGCGGAGAAACTTCTCTGCCATAACTGTGCTCACGTCTCACGGGCAGCATTCGGGTaGCTCCGCTACCAAGACCAG +
Preference number: 4 (lower is better)
Translates to: VDNSGAEKLLCHNCAHVSRAAFG*LRYQDQ
Trigger: CTGGTCTTGGTAGCGGAGGCACCCGAATGCTGCCCG...TGAGACGTGAGCACAGTTATGGCAGAGAAGTTTCTCCGCACCAGAATTATCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265382.8
ENST00000541509.5
CDS-3UTR GCA 90 bp AGGTTGATGATTTCTCTGTGTGTAGTGGGGCTCAGCCAAGTTGCTGTGGATAATCGGGCAGCATTCGGGTaGCTCCGCTACCAAGACCAG +
Preference number: 4 (lower is better)
Translates to: RLMISLCVVGLSQVAVDNRAAFG*LRYQDQ
Trigger: CTGGTCTTGGTAGCGGAGGCACCCGAATGCTGCCCG...ATTATCCACAGCAACTTGGCTGAGCCCCACTACACACAGAGAAATCATCAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265382.8
ENST00000541509.5
CDS-3UTR GCA 90 bp TCTGGTGCGGAGAAACTTCTCTGCCATAACTGTGCTCACGTCTCATCCATGTGCGTCTGGGTAGTGATGTaGTGGGGTCAGATTGCTCCC +
Preference number: 4 (lower is better)
Translates to: SGAEKLLCHNCAHVSSMCVWVVM*WGQIAP
Trigger: GGGAGCAATCTGACCCCAGCACATCACTACCCAGAC...GCACATGGATGAGACGTGAGCACAGTTATGGCAGAGAAGTTTCTCCGCACCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR CCA 90 bp AGGTTGATGATTTCTCTGTGTGTAGTGGGGCTCAGCCAAGTTGCTGTGGATAATGCTAGGGACCAGGTCTaGCCTGTGTCGGGATCCCAG +
Preference number: 4 (lower is better)
Translates to: RLMISLCVVGLSQVAVDNARDQV*PVSGSQ
Trigger: CTGGGATCCCGACACAGGCCAGACCTGGTCCCTAGC...ATTATCCACAGCAACTTGGCTGAGCCCCACTACACACAGAGAAATCATCAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR TCA 90 bp CTGGTGCGGAGAAACTTCTCTGCCATAACTGTGCTCACGTCTCATCCATGTGCTACCCGGCAGTCTCTCTaGAGTGTTTTCATAAGCGCG +
Preference number: 4 (lower is better)
Translates to: LVRRNFSAITVLTSHPCATRQSL*SVFISA
Trigger: CGCGCTTATGAAAACACTTCAGAGAGACTGCCGGGT...AGCACATGGATGAGACGTGAGCACAGTTATGGCAGAGAAGTTTCTCCGCACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR GCA 90 bp ATTTTTCACATCCCATCTGCTGATCAGCCTGAAGTTGACATCTTGAAAACTCTTGCTACGAGTGTGCAGTaGGCGCGCGCCGCGGCGAGT +
Preference number: 4 (lower is better)
Translates to: IFHIPSADQPEVDILKTLATSVQ*ARAAAS
Trigger: ACTCGCCGCGGCGCGCGCGCACTGCACACTCGTAGC...AAGAGTTTTCAAGATGTCAACTTCAGGCTGATCAGCAGATGGGATGTGAAAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265382.8
ENST00000541509.5
CDS-3UTR GCA 90 bp CACTTCCAACTCCAAAAAGGTGATTGGCAATGGTACAGAAAGCAGCTTAAATATGCGAAGGGAGAGCAGTaGAGGCGAGGGGCGGGAGGG +
Preference number: 4 (lower is better)
Translates to: HFQLQKGDWQWYRKQLKYAKGEQ*RRGAGG
Trigger: CCCTCCCGCCCCTCGCCTGCACTGCTCTCCCTTCGC...ATATTTAAGCTGCTTTCTGTACCATTGCCAATCACCTTTTTGGAGTTGGAAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265382.8
ENST00000541509.5
CDS-3UTR GCA 90 bp AATTCTGGTGCGGAGAAACTTCTCTGCCATAACTGTGCTCACGTCTCATCCATGGTGCTGGGGTCAGATTaGTCCCTTCGCTGGGTAGGA +
Preference number: 4 (lower is better)
Translates to: NSGAEKLLCHNCAHVSSMVLGSD*SLRWVG
Trigger: TCCTACCCAGCGAAGGGAGCAATCTGACCCCAGCAC...CATGGATGAGACGTGAGCACAGTTATGGCAGAGAAGTTTCTCCGCACCAGAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR GCA 90 bp GGTGCGGAGAAACTTCTCTGCCATAACTGTGCTCACGTCTCATCCATGTGCTTAGTCTGGGTAGTGATGTaGTGGGGTCAGATTGCTCCC +
Preference number: 4 (lower is better)
Translates to: GAEKLLCHNCAHVSSMCLVWVVM*WGQIAP
Trigger: GGGAGCAATCTGACCCCAGCACATCACTACCCAGAC...TAAGCACATGGATGAGACGTGAGCACAGTTATGGCAGAGAAGTTTCTCCGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR CCA 90 bp ACTTCCAACTCCAAAAAGGTGATTGGCAATGGTACAGAAAGCAGCTTAAATATAGCGCGGGTTCCCGCTTaGTGCGCGCCGGAGTCGGAG +
Preference number: 4 (lower is better)
Translates to: TSNSKKVIGNGTESSLNIARVPA*CAPESE
Trigger: CTCCGACTCCGGCGCGCACCAAGCGGGAACCCGCGC...TATATTTAAGCTGCTTTCTGTACCATTGCCAATCACCTTTTTGGAGTTGGAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265382.8
CDS-3UTR CCA 90 bp ACTTCCAACTCCAAAAAGGTGATTGGCAATGGTACAGAAAGCAGCTTAAATATAGGCAGGTGCCGGGGCTaGAGCCGCGGGGCCAAACTC +
Preference number: 4 (lower is better)
Translates to: TSNSKKVIGNGTESSLNIGRCRG*SRGAKL
Trigger: GAGTTTGGCCCCGCGGCTCCAGCCCCGGCACCTGCC...TATATTTAAGCTGCTTTCTGTACCATTGCCAATCACCTTTTTGGAGTTGGAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265382.8
ENST00000541509.5
CDS-3UTR TCA 90 bp GGTGCGGAGAAACTTCTCTGCCATAACTGTGCTCACGTCTCATCCATGTGCTTAAGCAGCTTCAAACAGTaGTGGAGTGCTAGGGACCAG +
Preference number: 4 (lower is better)
Translates to: GAEKLLCHNCAHVSSMCLSSFKQ*WSARDQ
Trigger: CTGGTCCCTAGCACTCCATCACTGTTTGAAGCTGCT...TAAGCACATGGATGAGACGTGAGCACAGTTATGGCAGAGAAGTTTCTCCGCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR GCA 90 bp CTGGTGCGGAGAAACTTCTCTGCCATAACTGTGCTCACGTCTCATCCATGTGCTAGTTGCGCCACAGTCTaGAAGTTATCGGGACGTTGT +
Preference number: 4 (lower is better)
Translates to: LVRRNFSAITVLTSHPCASCATV*KLSGRC
Trigger: ACAACGTCCCGATAACTTGCAGACTGTGGCGCAACT...AGCACATGGATGAGACGTGAGCACAGTTATGGCAGAGAAGTTTCTCCGCACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265382.8
ENST00000541509.5
CDS-3UTR GCA 90 bp GTGGATAATTCTGGTGCGGAGAAACTTCTCTGCCATAACTGTGCTCACGTCTCAGTCACATCTCAGCTCTaGTGGGCCTTGGCTTCCTCA +
Preference number: 4 (lower is better)
Translates to: VDNSGAEKLLCHNCAHVSVTSQL*WALASS
Trigger: TGAGGAAGCCAAGGCCCAGCAGAGCTGAGATGTGAC...TGAGACGTGAGCACAGTTATGGCAGAGAAGTTTCTCCGCACCAGAATTATCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265382.8
ENST00000478500.3
CDS-3UTR GCA 90 bp AAGTTGCTGTGGATAATTCTGGTGCGGAGAAACTTCTCTGCCATAACTGTGCTCGTGCTGGGGTCAGATTaGTCCCTTCGCTGGGTAGGA +
Preference number: 4 (lower is better)
Translates to: KLLWIILVRRNFSAITVLVLGSD*SLRWVG
Trigger: TCCTACCCAGCGAAGGGAGCAATCTGACCCCAGCAC...GAGCACAGTTATGGCAGAGAAGTTTCTCCGCACCAGAATTATCCACAGCAACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR CCA 90 bp GTGGATAATTCTGGTGCGGAGAAACTTCTCTGCCATAACTGTGCTCACGTCTCATCACAGGACTGGGGTTaGACGGCTCTGCAGTCACAT +
Preference number: 4 (lower is better)
Translates to: VDNSGAEKLLCHNCAHVSSQDWG*TALQSH
Trigger: ATGTGACTGCAGAGCCGTCCAACCCCAGTCCTGTGA...TGAGACGTGAGCACAGTTATGGCAGAGAAGTTTCTCCGCACCAGAATTATCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265382.8
ENST00000478500.3
CDS-3UTR TCA 90 bp GTGGATAATTCTGGTGCGGAGAAACTTCTCTGCCATAACTGTGCTCACGTCTCAAGCAGCTTCAAACAGTaGTGGAGTGCTAGGGACCAG +
Preference number: 4 (lower is better)
Translates to: VDNSGAEKLLCHNCAHVSSSFKQ*WSARDQ
Trigger: CTGGTCCCTAGCACTCCATCACTGTTTGAAGCTGCT...TGAGACGTGAGCACAGTTATGGCAGAGAAGTTTCTCCGCACCAGAATTATCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR GCA 90 bp GGTGCGGAGAAACTTCTCTGCCATAACTGTGCTCACGTCTCATCCATGTGCTTAGCTACCAAGACCAGTTaGGCCACAGTCTGCAAGTTA +
Preference number: 4 (lower is better)
Translates to: GAEKLLCHNCAHVSSMCLATKTS*ATVCKL
Trigger: TAACTTGCAGACTGTGGCGCAACTGGTCTTGGTAGC...TAAGCACATGGATGAGACGTGAGCACAGTTATGGCAGAGAAGTTTCTCCGCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265382.8
ENST00000541509.5
CDS-3UTR CCA 90 bp TCTGGTGCGGAGAAACTTCTCTGCCATAACTGTGCTCACGTCTCATCCATGTGCGTTAGTAGTGATGGGTaGCCTACTCATTGTCGAGAC +
Preference number: 4 (lower is better)
Translates to: SGAEKLLCHNCAHVSSMCVSSDG*PTHCRD
Trigger: GTCTCGACAATGAGTAGGCCACCCATCACTACTAAC...GCACATGGATGAGACGTGAGCACAGTTATGGCAGAGAAGTTTCTCCGCACCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR CCA 90 bp TCTGGTGCGGAGAAACTTCTCTGCCATAACTGTGCTCACGTCTCATCCATGTGCCCTATGGCTTTTAGCTaGAATGCCTCCCATTGTGTC +
Preference number: 4 (lower is better)
Translates to: SGAEKLLCHNCAHVSSMCPMAFS*NASHCV
Trigger: GACACAATGGGAGGCATTCCAGCTAAAAGCCATAGG...GCACATGGATGAGACGTGAGCACAGTTATGGCAGAGAAGTTTCTCCGCACCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR CCA 90 bp AATTCTGGTGCGGAGAAACTTCTCTGCCATAACTGTGCTCACGTCTCATCCATGCAATCTCCTGTGAAGTaGCCTTTAGGGCGGCGATTG +
Preference number: 4 (lower is better)
Translates to: NSGAEKLLCHNCAHVSSMQSPVK*PLGRRL
Trigger: CAATCGCCGCCCTAAAGGCCACTTCACAGGAGATTG...CATGGATGAGACGTGAGCACAGTTATGGCAGAGAAGTTTCTCCGCACCAGAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR CCA 90 bp CTGGTGCGGAGAAACTTCTCTGCCATAACTGTGCTCACGTCTCATCCATGTGCTTGTAGGCCTGTCGTGTaGATAGTGCTCATTGACGTA +
Preference number: 4 (lower is better)
Translates to: LVRRNFSAITVLTSHPCACRPVV*IVLIDV
Trigger: TACGTCAATGAGCACTATCCACACGACAGGCCTACA...AGCACATGGATGAGACGTGAGCACAGTTATGGCAGAGAAGTTTCTCCGCACCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR TCA 90 bp CTGGTGCGGAGAAACTTCTCTGCCATAACTGTGCTCACGTCTCATCCATGTGCTCATCTTGAACCTGTTTaGATAGAGTGTAGGCCTGTC +
Preference number: 4 (lower is better)
Translates to: LVRRNFSAITVLTSHPCAHLEPV*IECRPV
Trigger: GACAGGCCTACACTCTATTCAAACAGGTTCAAGATG...AGCACATGGATGAGACGTGAGCACAGTTATGGCAGAGAAGTTTCTCCGCACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478500.3
CDS-3UTR GCA 90 bp GTGGATAATTCTGGTGCGGAGAAACTTCTCTGCCATAACTGTGCTCACGTCTCAGCTACCAAGACCAGTTaGGCCACAGTCTGCAAGTTA +
Preference number: 4 (lower is better)
Translates to: VDNSGAEKLLCHNCAHVSATKTS*ATVCKL
Trigger: TAACTTGCAGACTGTGGCGCAACTGGTCTTGGTAGC...TGAGACGTGAGCACAGTTATGGCAGAGAAGTTTCTCCGCACCAGAATTATCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265382.8
ENST00000541509.5
CDS-3UTR CCA 90 bp GGTGCGGAGAAACTTCTCTGCCATAACTGTGCTCACGTCTCATCCATGTGCTTAGTTAGTAGTGATGGGTaGCCTACTCATTGTCGAGAC +
Preference number: 4 (lower is better)
Translates to: GAEKLLCHNCAHVSSMCLVSSDG*PTHCRD
Trigger: GTCTCGACAATGAGTAGGCCACCCATCACTACTAAC...TAAGCACATGGATGAGACGTGAGCACAGTTATGGCAGAGAAGTTTCTCCGCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR CCA 90 bp AGGTTGATGATTTCTCTGTGTGTAGTGGGGCTCAGCCAAGTTGCTGTGGATAATGCACTTCCAGAGTGTTaGGCTCAGCGGTCAAGTAGA +
Preference number: 4 (lower is better)
Translates to: RLMISLCVVGLSQVAVDNALPEC*AQRSSR
Trigger: TCTACTTGACCGCTGAGCCCAACACTCTGGAAGTGC...ATTATCCACAGCAACTTGGCTGAGCCCCACTACACACAGAGAAATCATCAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265382.8
ENST00000478500.3
CDS-3UTR TCA 90 bp GGTGCGGAGAAACTTCTCTGCCATAACTGTGCTCACGTCTCATCCATGTGCTTAAGATTCCATGGCTGTTaGGTAGAGAACCTTCTGCAT +
Preference number: 4 (lower is better)
Translates to: GAEKLLCHNCAHVSSMCLRFHGC*VENLLH
Trigger: ATGCAGAAGGTTCTCTACTCAACAGCCATGGAATCT...TAAGCACATGGATGAGACGTGAGCACAGTTATGGCAGAGAAGTTTCTCCGCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR TCA 90 bp CTGGTGCGGAGAAACTTCTCTGCCATAACTGTGCTCACGTCTCATCCATGTGCTGTGGATAGTGCTCATTaGCGTATAAGGAAGAAGATG +
Preference number: 4 (lower is better)
Translates to: LVRRNFSAITVLTSHPCAVDSAH*RIRKKM
Trigger: CATCTTCTTCCTTATACGTCAATGAGCACTATCCAC...AGCACATGGATGAGACGTGAGCACAGTTATGGCAGAGAAGTTTCTCCGCACCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR TCA 90 bp TCTGGTGCGGAGAAACTTCTCTGCCATAACTGTGCTCACGTCTCATCCATGTGCGTGGATAGTGCTCATTaGCGTATAAGGAAGAAGATG +
Preference number: 4 (lower is better)
Translates to: SGAEKLLCHNCAHVSSMCVDSAH*RIRKKM
Trigger: CATCTTCTTCCTTATACGTCAATGAGCACTATCCAC...GCACATGGATGAGACGTGAGCACAGTTATGGCAGAGAAGTTTCTCCGCACCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR TCA 90 bp GGTGCGGAGAAACTTCTCTGCCATAACTGTGCTCACGTCTCATCCATGTGCTTATGGTCCATGCTTGAATaGATGTACACGGAATCTTGG +
Preference number: 4 (lower is better)
Translates to: GAEKLLCHNCAHVSSMCLWSMLE*MYTESW
Trigger: CCAAGATTCCGTGTACATTCATTCAAGCATGGACCA...TAAGCACATGGATGAGACGTGAGCACAGTTATGGCAGAGAAGTTTCTCCGCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478500.3
CDS-3UTR TCA 90 bp GGTGCGGAGAAACTTCTCTGCCATAACTGTGCTCACGTCTCATCCATGTGCTTAGTGTTGGTCCATGCTTaGATGAATGTACACGGAATC +
Preference number: 4 (lower is better)
Translates to: GAEKLLCHNCAHVSSMCLVLVHA*MNVHGI
Trigger: GATTCCGTGTACATTCATTCAAGCATGGACCAACAC...TAAGCACATGGATGAGACGTGAGCACAGTTATGGCAGAGAAGTTTCTCCGCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478500.3
CDS-3UTR TCA 90 bp TTCCAGAGTGTTGGGCTCAGCGGTCAAGTAGATGGTCCCCTCTTCCAAGGTAAACTGATGTTGCCATCTTaGACCTGTTTGAATAGAGTG +
Preference number: 4 (lower is better)
Translates to: FQSVGLSGQVDGPLFQGKLMLPS*TCLNRV
Trigger: CACTCTATTCAAACAGGTTCAAGATGGCAACATCAG...TTTACCTTGGAAGAGGGGACCATCTACTTGACCGCTGAGCCCAACACTCTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478500.3
CDS-3UTR TCA 90 bp CTTCTCATCTGGCAAAAGAGAAGGAAGTTTAAAGACTGCCACTGGGGAAGAAAACTGGGATTACAGGTGTaGGCCACACACAGGACTGCT +
Preference number: 4 (lower is better)
Translates to: LLIWQKRRKFKDCHWGRKLGLQV*ATHRTA
Trigger: AGCAGTCCTGTGTGTGGCTCACACCTGTAATCCCAG...TTTTCTTCCCCAGTGGCAGTCTTTAAACTTCCTTCTCTTTTGCCAGATGAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000478500.3
CDS-3UTR GCA 90 bp AGGTTGATGATTTCTCTGTGTGTAGTGGGGCTCAGCCAAGTTGCTGTGGATAATAGTTGCGCCACAGTCTaGAAGTTATCGGGACGTTGT +
Preference number: 4 (lower is better)
Translates to: RLMISLCVVGLSQVAVDNSCATV*KLSGRC
Trigger: ACAACGTCCCGATAACTTGCAGACTGTGGCGCAACT...ATTATCCACAGCAACTTGGCTGAGCCCCACTACACACAGAGAAATCATCAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265382.8
ENST00000541509.5
CDS-3UTR GCA 90 bp AATTCTGGTGCGGAGAAACTTCTCTGCCATAACTGTGCTCACGTCTCATCCATGTTGTTTTCCAGGTGCTaGCTCTCCATTTTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: NSGAEKLLCHNCAHVSSMLFSRC*LSIFSS
Trigger: GCTGCTGAAAATGGAGAGGCAGCACCTGGAAAACAA...CATGGATGAGACGTGAGCACAGTTATGGCAGAGAAGTTTCTCCGCACCAGAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR CCA 90 bp TTCCAGAGTGTTGGGCTCAGCGGTCAAGTAGATGGTCCCCTCTTCCAAGGTAAAAAGAACATCTCGTTCTaGCTTGGAAGTGAGATTACC +
Preference number: 4 (lower is better)
Translates to: FQSVGLSGQVDGPLFQGKKNISF*LGSEIT
Trigger: GGTAATCTCACTTCCAAGCCAGAACGAGATGTTCTT...TTTACCTTGGAAGAGGGGACCATCTACTTGACCGCTGAGCCCAACACTCTGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478500.3
CDS-3UTR CCA 90 bp AGGTTGATGATTTCTCTGTGTGTAGTGGGGCTCAGCCAAGTTGCTGTGGATAATGATTGCTCCCTTCGCTaGGTAGGAACACACTTTCCA +
Preference number: 4 (lower is better)
Translates to: RLMISLCVVGLSQVAVDNDCSLR*VGTHFP
Trigger: TGGAAAGTGTGTTCCTACCCAGCGAAGGGAGCAATC...ATTATCCACAGCAACTTGGCTGAGCCCCACTACACACAGAGAAATCATCAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR CCA 90 bp AATTCTGGTGCGGAGAAACTTCTCTGCCATAACTGTGCTCACGTCTCATCCATGGATTTCCCTGGACCCTaGATAGATTCCATGGCTGTT +
Preference number: 4 (lower is better)
Translates to: NSGAEKLLCHNCAHVSSMDFPGP*IDSMAV
Trigger: AACAGCCATGGAATCTATCCAGGGTCCAGGGAAATC...CATGGATGAGACGTGAGCACAGTTATGGCAGAGAAGTTTCTCCGCACCAGAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR CCA 90 bp GTGGATAATTCTGGTGCGGAGAAACTTCTCTGCCATAACTGTGCTCACGTCTCACCTATGGCTTTTAGCTaGAATGCCTCCCATTGTGTC +
Preference number: 4 (lower is better)
Translates to: VDNSGAEKLLCHNCAHVSPMAFS*NASHCV
Trigger: GACACAATGGGAGGCATTCCAGCTAAAAGCCATAGG...TGAGACGTGAGCACAGTTATGGCAGAGAAGTTTCTCCGCACCAGAATTATCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR CCA 90 bp TTTAGACTTCTTGTTTTTGATGACCTTGACAGTTCTGAAGAGTACTCATCAGGTGCTAGGGACCAGGTCTaGCCTGTGTCGGGATCCCAG +
Preference number: 4 (lower is better)
Translates to: FRLLVFDDLDSSEEYSSGARDQV*PVSGSQ
Trigger: CTGGGATCCCGACACAGGCCAGACCTGGTCCCTAGC...ACCTGATGAGTACTCTTCAGAACTGTCAAGGTCATCAAAAACAAGAAGTCTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478500.3
CDS-3UTR CCA 90 bp AATTCTGGTGCGGAGAAACTTCTCTGCCATAACTGTGCTCACGTCTCATCCATGTCAGCCAAGTTGCTGTaGATAATTCTGGTGCGGAGA +
Preference number: 4 (lower is better)
Translates to: NSGAEKLLCHNCAHVSSMSAKLL*IILVRR
Trigger: TCTCCGCACCAGAATTATCCACAGCAACTTGGCTGA...CATGGATGAGACGTGAGCACAGTTATGGCAGAGAAGTTTCTCCGCACCAGAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR TCA 90 bp CTTCTCATCTGGCAAAAGAGAAGGAAGTTTAAAGACTGCCACTGGGGAAGAAAAAAGGCCCTCAAATGCTaGGAGGTATCAGGCACCAGA +
Preference number: 4 (lower is better)
Translates to: LLIWQKRRKFKDCHWGRKKALKC*EVSGTR
Trigger: TCTGGTGCCTGATACCTCTCAGCATTTGAGGGCCTT...TTTTCTTCCCCAGTGGCAGTCTTTAAACTTCCTTCTCTTTTGCCAGATGAGAAG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000478500.3
CDS-3UTR TCA 90 bp GTGGATAATTCTGGTGCGGAGAAACTTCTCTGCCATAACTGTGCTCACGTCTCAGAATGGTCCAGGAAATaGATTCCCAACAGAAGGCTA +
Preference number: 4 (lower is better)
Translates to: VDNSGAEKLLCHNCAHVSEWSRK*IPNRRL
Trigger: TAGCCTTCTGTTGGGAATTCATTTCCTGGACCATTC...TGAGACGTGAGCACAGTTATGGCAGAGAAGTTTCTCCGCACCAGAATTATCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR TCA 90 bp GTGGATAATTCTGGTGCGGAGAAACTTCTCTGCCATAACTGTGCTCACGTCTCACCGTTTCTTAGACGGTaGAGCCTTCAAAGCTTGAAT +
Preference number: 4 (lower is better)
Translates to: VDNSGAEKLLCHNCAHVSPFLRR*SLQSLN
Trigger: ATTCAAGCTTTGAAGGCTTCACCGTCTAAGAAACGG...TGAGACGTGAGCACAGTTATGGCAGAGAAGTTTCTCCGCACCAGAATTATCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR TCA 90 bp GGTGCGGAGAAACTTCTCTGCCATAACTGTGCTCACGTCTCATCCATGTGCTTACCAACTCCAAAAAGGTaGTTGGCAATGGTACAGAAA +
Preference number: 4 (lower is better)
Translates to: GAEKLLCHNCAHVSSMCLPTPKR*LAMVQK
Trigger: TTTCTGTACCATTGCCAATCACCTTTTTGGAGTTGG...TAAGCACATGGATGAGACGTGAGCACAGTTATGGCAGAGAAGTTTCTCCGCACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR TCA 90 bp CTGGTGCGGAGAAACTTCTCTGCCATAACTGTGCTCACGTCTCATCCATGTGCTCTTAGTTTAATGCTCTaGTGTTGCCATCTTGAACCT +
Preference number: 4 (lower is better)
Translates to: LVRRNFSAITVLTSHPCALSLML*CCHLEP
Trigger: AGGTTCAAGATGGCAACATCAGAGCATTAAACTAAG...AGCACATGGATGAGACGTGAGCACAGTTATGGCAGAGAAGTTTCTCCGCACCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478500.3
CDS-3UTR GCA 90 bp AGGTTGATGATTTCTCTGTGTGTAGTGGGGCTCAGCCAAGTTGCTGTGGATAATTTGTTTTCCAGGTGCTaGCTCTCCATTTTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: RLMISLCVVGLSQVAVDNLFSRC*LSIFSS
Trigger: GCTGCTGAAAATGGAGAGGCAGCACCTGGAAAACAA...ATTATCCACAGCAACTTGGCTGAGCCCCACTACACACAGAGAAATCATCAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR GCA 90 bp AAGTTGCTGTGGATAATTCTGGTGCGGAGAAACTTCTCTGCCATAACTGTGCTCTTGTTTTCCAGGTGCTaGCTCTCCATTTTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: KLLWIILVRRNFSAITVLLFSRC*LSIFSS
Trigger: GCTGCTGAAAATGGAGAGGCAGCACCTGGAAAACAA...GAGCACAGTTATGGCAGAGAAGTTTCTCCGCACCAGAATTATCCACAGCAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR GCA 90 bp GGTGCGGAGAAACTTCTCTGCCATAACTGTGCTCACGTCTCATCCATGTGCTTAAAGTCATATGTAAAGTaGATTCTCATGGAGCGTGGC +
Preference number: 4 (lower is better)
Translates to: GAEKLLCHNCAHVSSMCLKSYVK*ILMERG
Trigger: GCCACGCTCCATGAGAATGCACTTTACATATGACTT...TAAGCACATGGATGAGACGTGAGCACAGTTATGGCAGAGAAGTTTCTCCGCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR CCA 90 bp AGGTTGATGATTTCTCTGTGTGTAGTGGGGCTCAGCCAAGTTGCTGTGGATAATGTTAGTAGTGATGGGTaGCCTACTCATTGTCGAGAC +
Preference number: 4 (lower is better)
Translates to: RLMISLCVVGLSQVAVDNVSSDG*PTHCRD
Trigger: GTCTCGACAATGAGTAGGCCACCCATCACTACTAAC...ATTATCCACAGCAACTTGGCTGAGCCCCACTACACACAGAGAAATCATCAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR CCA 90 bp GGTGCGGAGAAACTTCTCTGCCATAACTGTGCTCACGTCTCATCCATGTGCTTACTTAAATCTAAAGTCTaGGTAGTGATGTGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: GAEKLLCHNCAHVSSMCLLKSKV*VVMCWG
Trigger: ACCCCAGCACATCACTACCCAGACTTTAGATTTAAG...TAAGCACATGGATGAGACGTGAGCACAGTTATGGCAGAGAAGTTTCTCCGCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR CCA 90 bp AGGTTGATGATTTCTCTGTGTGTAGTGGGGCTCAGCCAAGTTGCTGTGGATAATGATTTCCCTGGACCCTaGATAGATTCCATGGCTGTT +
Preference number: 4 (lower is better)
Translates to: RLMISLCVVGLSQVAVDNDFPGP*IDSMAV
Trigger: AACAGCCATGGAATCTATCCAGGGTCCAGGGAAATC...ATTATCCACAGCAACTTGGCTGAGCCCCACTACACACAGAGAAATCATCAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR CCA 90 bp GTGGATAATTCTGGTGCGGAGAAACTTCTCTGCCATAACTGTGCTCACGTCTCAATCTCCAGATTTCCCTaGACCCTGGATAGATTCCAT +
Preference number: 4 (lower is better)
Translates to: VDNSGAEKLLCHNCAHVSISRFP*TLDRFH
Trigger: ATGGAATCTATCCAGGGTCCAGGGAAATCTGGAGAT...TGAGACGTGAGCACAGTTATGGCAGAGAAGTTTCTCCGCACCAGAATTATCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR CCA 90 bp AGGTTGATGATTTCTCTGTGTGTAGTGGGGCTCAGCCAAGTTGCTGTGGATAATCCTATGGCTTTTAGCTaGAATGCCTCCCATTGTGTC +
Preference number: 4 (lower is better)
Translates to: RLMISLCVVGLSQVAVDNPMAFS*NASHCV
Trigger: GACACAATGGGAGGCATTCCAGCTAAAAGCCATAGG...ATTATCCACAGCAACTTGGCTGAGCCCCACTACACACAGAGAAATCATCAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR CCA 90 bp GGTGCGGAGAAACTTCTCTGCCATAACTGTGCTCACGTCTCATCCATGTGCTTATCATCCTTCCATTCCTaGCTAATTGAGGACACAATC +
Preference number: 4 (lower is better)
Translates to: GAEKLLCHNCAHVSSMCLSSFHS*LIEDTI
Trigger: GATTGTGTCCTCAATTAGCCAGGAATGGAAGGATGA...TAAGCACATGGATGAGACGTGAGCACAGTTATGGCAGAGAAGTTTCTCCGCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR CCA 90 bp TCTGGTGCGGAGAAACTTCTCTGCCATAACTGTGCTCACGTCTCATCCATGTGCAAGAAGATGAAATTGTaGTTGCCAAGGAAGCAGCTT +
Preference number: 4 (lower is better)
Translates to: SGAEKLLCHNCAHVSSMCKKMKL*LPRKQL
Trigger: AAGCTGCTTCCTTGGCAACCACAATTTCATCTTCTT...GCACATGGATGAGACGTGAGCACAGTTATGGCAGAGAAGTTTCTCCGCACCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR TCA 90 bp GGTGCGGAGAAACTTCTCTGCCATAACTGTGCTCACGTCTCATCCATGTGCTTAGATATTAATGCCTCCTaGTTGCATACAATACAGTCC +
Preference number: 4 (lower is better)
Translates to: GAEKLLCHNCAHVSSMCLDINAS*LHTIQS
Trigger: GGACTGTATTGTATGCAATCAGGAGGCATTAATATC...TAAGCACATGGATGAGACGTGAGCACAGTTATGGCAGAGAAGTTTCTCCGCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR TCA 90 bp AGGTTGATGATTTCTCTGTGTGTAGTGGGGCTCAGCCAAGTTGCTGTGGATAATGAATGGTCCAGGAAATaGATTCCCAACAGAAGGCTA +
Preference number: 4 (lower is better)
Translates to: RLMISLCVVGLSQVAVDNEWSRK*IPNRRL
Trigger: TAGCCTTCTGTTGGGAATTCATTTCCTGGACCATTC...ATTATCCACAGCAACTTGGCTGAGCCCCACTACACACAGAGAAATCATCAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR TCA 90 bp TCTGGTGCGGAGAAACTTCTCTGCCATAACTGTGCTCACGTCTCATCCATGTGCTGGATGCATGCACAATaGAATAATGCAAAAGTCCAT +
Preference number: 4 (lower is better)
Translates to: SGAEKLLCHNCAHVSSMCWMHAQ*NNAKVH
Trigger: ATGGACTTTTGCATTATTTCATTGTGCATGCATCCA...GCACATGGATGAGACGTGAGCACAGTTATGGCAGAGAAGTTTCTCCGCACCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR GCA 90 bp CTGGAAGGTAACCCTTTGCTCCATACTATATCCAGATTTTGTTCATTTTCCTTAGTGCTGGGGTCAGATTaGTCCCTTCGCTGGGTAGGA +
Preference number: 4 (lower is better)
Translates to: LEGNPLLHTISRFCSFSLVLGSD*SLRWVG
Trigger: TCCTACCCAGCGAAGGGAGCAATCTGACCCCAGCAC...TAAGGAAAATGAACAAAATCTGGATATAGTATGGAGCAAAGGGTTACCTTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000478500.3
CDS-3UTR GCA 90 bp GTGGATAATTCTGGTGCGGAGAAACTTCTCTGCCATAACTGTGCTCACGTCTCACCTTCGTGCATGTCTTaGAGGAAATCTAAGTCCTTA +
Preference number: 4 (lower is better)
Translates to: VDNSGAEKLLCHNCAHVSPSCMS*RKSKSL
Trigger: TAAGGACTTAGATTTCCTGCAAGACATGCACGAAGG...TGAGACGTGAGCACAGTTATGGCAGAGAAGTTTCTCCGCACCAGAATTATCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR GCA 90 bp AATTCTGGTGCGGAGAAACTTCTCTGCCATAACTGTGCTCACGTCTCATCCATGCCTTCGTGCATGTCTTaGAGGAAATCTAAGTCCTTA +
Preference number: 4 (lower is better)
Translates to: NSGAEKLLCHNCAHVSSMPSCMS*RKSKSL
Trigger: TAAGGACTTAGATTTCCTGCAAGACATGCACGAAGG...CATGGATGAGACGTGAGCACAGTTATGGCAGAGAAGTTTCTCCGCACCAGAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR GCA 90 bp AGGTTGATGATTTCTCTGTGTGTAGTGGGGCTCAGCCAAGTTGCTGTGGATAATCTCTGTGTTGGTCCATaGTTGAATGAATGTACACGG +
Preference number: 4 (lower is better)
Translates to: RLMISLCVVGLSQVAVDNLCVGP*LNECTR
Trigger: CCGTGTACATTCATTCAAGCATGGACCAACACAGAG...ATTATCCACAGCAACTTGGCTGAGCCCCACTACACACAGAGAAATCATCAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478500.3
CDS-3UTR CCA 90 bp AATTCTGGTGCGGAGAAACTTCTCTGCCATAACTGTGCTCACGTCTCATCCATGAAGAACATCTCGTTCTaGCTTGGAAGTGAGATTACC +
Preference number: 4 (lower is better)
Translates to: NSGAEKLLCHNCAHVSSMKNISF*LGSEIT
Trigger: GGTAATCTCACTTCCAAGCCAGAACGAGATGTTCTT...CATGGATGAGACGTGAGCACAGTTATGGCAGAGAAGTTTCTCCGCACCAGAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR CCA 90 bp AAGTTGCTGTGGATAATTCTGGTGCGGAGAAACTTCTCTGCCATAACTGTGCTCATCTCCAGATTTCCCTaGACCCTGGATAGATTCCAT +
Preference number: 4 (lower is better)
Translates to: KLLWIILVRRNFSAITVLISRFP*TLDRFH
Trigger: ATGGAATCTATCCAGGGTCCAGGGAAATCTGGAGAT...GAGCACAGTTATGGCAGAGAAGTTTCTCCGCACCAGAATTATCCACAGCAACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR CCA 90 bp CTGGTGCGGAGAAACTTCTCTGCCATAACTGTGCTCACGTCTCATCCATGTGCTGTCTGCATAAAAGCTTaGTCTATGAACAGAAACAGT +
Preference number: 4 (lower is better)
Translates to: LVRRNFSAITVLTSHPCAVCIKA*SMNRNS
Trigger: ACTGTTTCTGTTCATAGACCAAGCTTTTATGCAGAC...AGCACATGGATGAGACGTGAGCACAGTTATGGCAGAGAAGTTTCTCCGCACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR CCA 90 bp GTGGATAATTCTGGTGCGGAGAAACTTCTCTGCCATAACTGTGCTCACGTCTCATCATCCTTCCATTCCTaGCTAATTGAGGACACAATC +
Preference number: 4 (lower is better)
Translates to: VDNSGAEKLLCHNCAHVSSSFHS*LIEDTI
Trigger: GATTGTGTCCTCAATTAGCCAGGAATGGAAGGATGA...TGAGACGTGAGCACAGTTATGGCAGAGAAGTTTCTCCGCACCAGAATTATCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR CCA 90 bp CTGGTGCGGAGAAACTTCTCTGCCATAACTGTGCTCACGTCTCATCCATGTGCTAAAGGTGATTGGCAATaGTACAGAAAGCAGCTTAAA +
Preference number: 4 (lower is better)
Translates to: LVRRNFSAITVLTSHPCAKGDWQ*YRKQLK
Trigger: TTTAAGCTGCTTTCTGTACCATTGCCAATCACCTTT...AGCACATGGATGAGACGTGAGCACAGTTATGGCAGAGAAGTTTCTCCGCACCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR CCA 90 bp GTGGATAATTCTGGTGCGGAGAAACTTCTCTGCCATAACTGTGCTCACGTCTCACTCCAAAAAGGTGATTaGCAATGGTACAGAAAGCAG +
Preference number: 4 (lower is better)
Translates to: VDNSGAEKLLCHNCAHVSLQKGD*QWYRKQ
Trigger: CTGCTTTCTGTACCATTGCCAATCACCTTTTTGGAG...TGAGACGTGAGCACAGTTATGGCAGAGAAGTTTCTCCGCACCAGAATTATCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR TCA 90 bp ATTTTTCACATCCCATCTGCTGATCAGCCTGAAGTTGACATCTTGAAAACTCTTACCCGGCAGTCTCTCTaGAGTGTTTTCATAAGCGCG +
Preference number: 4 (lower is better)
Translates to: IFHIPSADQPEVDILKTLTRQSL*SVFISA
Trigger: CGCGCTTATGAAAACACTTCAGAGAGACTGCCGGGT...AAGAGTTTTCAAGATGTCAACTTCAGGCTGATCAGCAGATGGGATGTGAAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR TCA 90 bp ATTTTTCACATCCCATCTGCTGATCAGCCTGAAGTTGACATCTTGAAAACTCTTAGCAGCTTCAAACAGTaGTGGAGTGCTAGGGACCAG +
Preference number: 4 (lower is better)
Translates to: IFHIPSADQPEVDILKTLSSFKQ*WSARDQ
Trigger: CTGGTCCCTAGCACTCCATCACTGTTTGAAGCTGCT...AAGAGTTTTCAAGATGTCAACTTCAGGCTGATCAGCAGATGGGATGTGAAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR GCA 90 bp TCCAACTCCAAAAAGGTGATTGGCAATGGTACAGAAAGCAGCTTAAATATAGTTGTCACATCTCAGCTCTaGTGGGCCTTGGCTTCCTCA +
Preference number: 4 (lower is better)
Translates to: SNSKKVIGNGTESSLNIVVTSQL*WALASS
Trigger: TGAGGAAGCCAAGGCCCAGCAGAGCTGAGATGTGAC...AACTATATTTAAGCTGCTTTCTGTACCATTGCCAATCACCTTTTTGGAGTTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265382.8
ENST00000478500.3
CDS-3UTR GCA 90 bp TCCAACTCCAAAAAGGTGATTGGCAATGGTACAGAAAGCAGCTTAAATATAGTTGTCTGGGTAGTGATGTaGTGGGGTCAGATTGCTCCC +
Preference number: 4 (lower is better)
Translates to: SNSKKVIGNGTESSLNIVVWVVM*WGQIAP
Trigger: GGGAGCAATCTGACCCCAGCACATCACTACCCAGAC...AACTATATTTAAGCTGCTTTCTGTACCATTGCCAATCACCTTTTTGGAGTTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR GCA 90 bp AGGTTGATGATTTCTCTGTGTGTAGTGGGGCTCAGCCAAGTTGCTGTGGATAATAAGTCATATGTAAAGTaGATTCTCATGGAGCGTGGC +
Preference number: 4 (lower is better)
Translates to: RLMISLCVVGLSQVAVDNKSYVK*ILMERG
Trigger: GCCACGCTCCATGAGAATGCACTTTACATATGACTT...ATTATCCACAGCAACTTGGCTGAGCCCCACTACACACAGAGAAATCATCAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR GCA 90 bp GTGGATAATTCTGGTGCGGAGAAACTTCTCTGCCATAACTGTGCTCACGTCTCAACTCATCAGGTATACTaGAGAATGTCCCACATGATT +
Preference number: 4 (lower is better)
Translates to: VDNSGAEKLLCHNCAHVSTHQVY*RMSHMI
Trigger: AATCATGTGGGACATTCTGCAGTATACCTGATGAGT...TGAGACGTGAGCACAGTTATGGCAGAGAAGTTTCTCCGCACCAGAATTATCCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478500.3
CDS-3UTR CCA 90 bp ATTTTTCACATCCCATCTGCTGATCAGCCTGAAGTTGACATCTTGAAAACTCTTCAATCTCCTGTGAAGTaGCCTTTAGGGCGGCGATTG +
Preference number: 4 (lower is better)
Translates to: IFHIPSADQPEVDILKTLQSPVK*PLGRRL
Trigger: CAATCGCCGCCCTAAAGGCCACTTCACAGGAGATTG...AAGAGTTTTCAAGATGTCAACTTCAGGCTGATCAGCAGATGGGATGTGAAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR CCA 90 bp AATTCTGGTGCGGAGAAACTTCTCTGCCATAACTGTGCTCACGTCTCATCCATGAAGAAGATGAAATTGTaGTTGCCAAGGAAGCAGCTT +
Preference number: 4 (lower is better)
Translates to: NSGAEKLLCHNCAHVSSMKKMKL*LPRKQL
Trigger: AAGCTGCTTCCTTGGCAACCACAATTTCATCTTCTT...CATGGATGAGACGTGAGCACAGTTATGGCAGAGAAGTTTCTCCGCACCAGAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR CCA 90 bp CACTTCCAACTCCAAAAAGGTGATTGGCAATGGTACAGAAAGCAGCTTAAATATGCACTTCCAGAGTGTTaGGCTCAGCGGTCAAGTAGA +
Preference number: 4 (lower is better)
Translates to: HFQLQKGDWQWYRKQLKYALPEC*AQRSSR
Trigger: TCTACTTGACCGCTGAGCCCAACACTCTGGAAGTGC...ATATTTAAGCTGCTTTCTGTACCATTGCCAATCACCTTTTTGGAGTTGGAAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265382.8
ENST00000478500.3
CDS-3UTR CCA 90 bp CTGGAAGGTAACCCTTTGCTCCATACTATATCCAGATTTTGTTCATTTTCCTTAACATCTCAGCTCTGCTaGGCCTTGGCTTCCTCATCC +
Preference number: 4 (lower is better)
Translates to: LEGNPLLHTISRFCSFSLTSQLC*ALASSS
Trigger: GGATGAGGAAGCCAAGGCCCAGCAGAGCTGAGATGT...TAAGGAAAATGAACAAAATCTGGATATAGTATGGAGCAAAGGGTTACCTTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478500.3
CDS-3UTR TCA 90 bp TCCAACTCCAAAAAGGTGATTGGCAATGGTACAGAAAGCAGCTTAAATATAGTTAAGGCCCTCAAATGCTaGGAGGTATCAGGCACCAGA +
Preference number: 4 (lower is better)
Translates to: SNSKKVIGNGTESSLNIVKALKC*EVSGTR
Trigger: TCTGGTGCCTGATACCTCTCAGCATTTGAGGGCCTT...AACTATATTTAAGCTGCTTTCTGTACCATTGCCAATCACCTTTTTGGAGTTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265382.8
ENST00000478500.3
CDS-3UTR TCA 90 bp AGGTTGATGATTTCTCTGTGTGTAGTGGGGCTCAGCCAAGTTGCTGTGGATAATTATCCTATTCCCAGCTaGATAGCACCTTTAATAGCA +
Preference number: 4 (lower is better)
Translates to: RLMISLCVVGLSQVAVDNYPIPS*IAPLIA
Trigger: TGCTATTAAAGGTGCTATTCAGCTGGGAATAGGATA...ATTATCCACAGCAACTTGGCTGAGCCCCACTACACACAGAGAAATCATCAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR TCA 90 bp AGGTTGATGATTTCTCTGTGTGTAGTGGGGCTCAGCCAAGTTGCTGTGGATAATTCTTCGCTTATACGTTaGGCCTTTCAAGTCATATGT +
Preference number: 4 (lower is better)
Translates to: RLMISLCVVGLSQVAVDNSSLIR*AFQVIC
Trigger: ACATATGACTTGAAAGGCTCAACGTATAAGCGAAGA...ATTATCCACAGCAACTTGGCTGAGCCCCACTACACACAGAGAAATCATCAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR TCA 90 bp AATTCTGGTGCGGAGAAACTTCTCTGCCATAACTGTGCTCACGTCTCATCCATGTGGATGCATGCACAATaGAATAATGCAAAAGTCCAT +
Preference number: 4 (lower is better)
Translates to: NSGAEKLLCHNCAHVSSMWMHAQ*NNAKVH
Trigger: ATGGACTTTTGCATTATTTCATTGTGCATGCATCCA...CATGGATGAGACGTGAGCACAGTTATGGCAGAGAAGTTTCTCCGCACCAGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR TCA 90 bp AGGTTGATGATTTCTCTGTGTGTAGTGGGGCTCAGCCAAGTTGCTGTGGATAATTTTTCACTTACTGTTTaGATAGAGTGTAGGCCTGTC +
Preference number: 4 (lower is better)
Translates to: RLMISLCVVGLSQVAVDNFSLTV*IECRPV
Trigger: GACAGGCCTACACTCTATTCAAACAGTAAGTGAAAA...ATTATCCACAGCAACTTGGCTGAGCCCCACTACACACAGAGAAATCATCAACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541509.5
CDS-3UTR GCA 90 bp AGGTTGATGATTTCTCTGTGTGTAGTGGGGCTCAGCCAAGTTGCTGTGGATAATAAATACAACCCTTCGTaGATGTCTTGCAGGAAATCT +
Preference number: 4 (lower is better)
Translates to: RLMISLCVVGLSQVAVDNKYNPS*MSCRKS
Trigger: AGATTTCCTGCAAGACATGCACGAAGGGTTGTATTT...ATTATCCACAGCAACTTGGCTGAGCCCCACTACACACAGAGAAATCATCAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR GCA 90 bp CACTTCCAACTCCAAAAAGGTGATTGGCAATGGTACAGAAAGCAGCTTAAATATGAAGCATTGTCATCCTaGACTTCCAGAGTGTTGGGC +
Preference number: 4 (lower is better)
Translates to: HFQLQKGDWQWYRKQLKYEALSS*TSRVLG
Trigger: GCCCAACACTCTGGAAGTGCAGGATGACAATGCTTC...ATATTTAAGCTGCTTTCTGTACCATTGCCAATCACCTTTTTGGAGTTGGAAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265382.8
ENST00000478500.3
CDS-3UTR GCA 90 bp ATTTTTCACATCCCATCTGCTGATCAGCCTGAAGTTGACATCTTGAAAACTCTTGAAGCATTGTCATCCTaGACTTCCAGAGTGTTGGGC +
Preference number: 4 (lower is better)
Translates to: IFHIPSADQPEVDILKTLEALSS*TSRVLG
Trigger: GCCCAACACTCTGGAAGTGCAGGATGACAATGCTTC...AAGAGTTTTCAAGATGTCAACTTCAGGCTGATCAGCAGATGGGATGTGAAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265382.8
ENST00000478500.3
CDS-3UTR GCA 90 bp GGTGCGGAGAAACTTCTCTGCCATAACTGTGCTCACGTCTCATCCATGTGCTTACTTAAATATAGTTCATaGAGTTCTTCACAGTTCAGC +
Preference number: 4 (lower is better)
Translates to: GAEKLLCHNCAHVSSMCLLKYSS*SSSQFS
Trigger: GCTGAACTGTGAAGAACTGCATGAACTATATTTAAG...TAAGCACATGGATGAGACGTGAGCACAGTTATGGCAGAGAAGTTTCTCCGCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR GCA 90 bp GTGGATAATTCTGGTGCGGAGAAACTTCTCTGCCATAACTGTGCTCACGTCTCAGATATGAATAACAGGTaGTCAGATGGATTGAGCATA +
Preference number: 4 (lower is better)
Translates to: VDNSGAEKLLCHNCAHVSDMNNR*SDGLSI
Trigger: TATGCTCAATCCATCTGAGCACCTGTTATTCATATC...TGAGACGTGAGCACAGTTATGGCAGAGAAGTTTCTCCGCACCAGAATTATCCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478500.3
CDS-3UTR CCA 90 bp TCCAACTCCAAAAAGGTGATTGGCAATGGTACAGAAAGCAGCTTAAATATAGTTACATCTCAGCTCTGCTaGGCCTTGGCTTCCTCATCT +
Preference number: 4 (lower is better)
Translates to: SNSKKVIGNGTESSLNIVTSQLC*ALASSS
Trigger: AGATGAGGAAGCCAAGGCCCAGCAGAGCTGAGATGT...AACTATATTTAAGCTGCTTTCTGTACCATTGCCAATCACCTTTTTGGAGTTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265382.8
CDS-3UTR CCA 90 bp AGCACTTCCAACTCCAAAAAGGTGATTGGCAATGGTACAGAAAGCAGCTTAAATTGTAGGCCTGTCGTGTaGATAGTGCTCATTGACGTA +
Preference number: 4 (lower is better)
Translates to: STSNSKKVIGNGTESSLNCRPVV*IVLIDV
Trigger: TACGTCAATGAGCACTATCCACACGACAGGCCTACA...ATTTAAGCTGCTTTCTGTACCATTGCCAATCACCTTTTTGGAGTTGGAAGTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR CCA 90 bp AGCACTTCCAACTCCAAAAAGGTGATTGGCAATGGTACAGAAAGCAGCTTAAATTCAGCCAAGTTGCTGTaGATAATTCTGGTGCGGAGA +
Preference number: 4 (lower is better)
Translates to: STSNSKKVIGNGTESSLNSAKLL*IILVRR
Trigger: TCTCCGCACCAGAATTATCCACAGCAACTTGGCTGA...ATTTAAGCTGCTTTCTGTACCATTGCCAATCACCTTTTTGGAGTTGGAAGTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR TCA 90 bp AGGTTGATGATTTCTCTGTGTGTAGTGGGGCTCAGCCAAGTTGCTGTGGATAATCTGAAGTTGACATCTTaGAAACTCTTAAGTCAGGTT +
Preference number: 4 (lower is better)
Translates to: RLMISLCVVGLSQVAVDNLKLTS*KLLSQV
Trigger: AACCTGACTTAAGAGTTTTCAAGATGTCAACTTCAG...ATTATCCACAGCAACTTGGCTGAGCCCCACTACACACAGAGAAATCATCAACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR CCA 90 bp AAGGTAAATGTTGAACTGGAAGGTAACCCTTTGCTCCATACTATATCCAGATTTGATTGCTCCCTTCGCTaGGTAGGAACACACTTTCCA +
Preference number: 4 (lower is better)
Translates to: KVNVELEGNPLLHTISRFDCSLR*VGTHFP
Trigger: TGGAAAGTGTGTTCCTACCCAGCGAAGGGAGCAATC...AAATCTGGATATAGTATGGAGCAAAGGGTTACCTTCCAGTTCAACATTTACCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478500.3
CDS-3UTR CCA 90 bp CACTTCCAACTCCAAAAAGGTGATTGGCAATGGTACAGAAAGCAGCTTAAATATTGTAGGCCTGTCGTGTaGATAGTGCTCATTGACGTA +
Preference number: 4 (lower is better)
Translates to: HFQLQKGDWQWYRKQLKYCRPVV*IVLIDV
Trigger: TACGTCAATGAGCACTATCCACACGACAGGCCTACA...ATATTTAAGCTGCTTTCTGTACCATTGCCAATCACCTTTTTGGAGTTGGAAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR CCA 90 bp CACTTCCAACTCCAAAAAGGTGATTGGCAATGGTACAGAAAGCAGCTTAAATATTCAGCCAAGTTGCTGTaGATAATTCTGGTGCGGAGA +
Preference number: 4 (lower is better)
Translates to: HFQLQKGDWQWYRKQLKYSAKLL*IILVRR
Trigger: TCTCCGCACCAGAATTATCCACAGCAACTTGGCTGA...ATATTTAAGCTGCTTTCTGTACCATTGCCAATCACCTTTTTGGAGTTGGAAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR TCA 90 bp TCCAACTCCAAAAAGGTGATTGGCAATGGTACAGAAAGCAGCTTAAATATAGTTGTTCTGGCTTGGAAGTaGGATTACCCACTGTGTATC +
Preference number: 4 (lower is better)
Translates to: SNSKKVIGNGTESSLNIVVLAWK*DYPLCI
Trigger: GATACACAGTGGGTAATCTCACTTCCAAGCCAGAAC...AACTATATTTAAGCTGCTTTCTGTACCATTGCCAATCACCTTTTTGGAGTTGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR TCA 90 bp ATTTTTCACATCCCATCTGCTGATCAGCCTGAAGTTGACATCTTGAAAACTCTTCCGTTTCTTAGACGGTaGAGCCTTCAAAGCTTGAAT +
Preference number: 4 (lower is better)
Translates to: IFHIPSADQPEVDILKTLPFLRR*SLQSLN
Trigger: ATTCAAGCTTTGAAGGCTTCACCGTCTAAGAAACGG...AAGAGTTTTCAAGATGTCAACTTCAGGCTGATCAGCAGATGGGATGTGAAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR TCA 90 bp GAGTACTCATCAGGTATACTGCAGAATGTCCCACATGATTTGGGTTGCTTGATGTGGATGCATGCACAATaGAATAATGCAAAAGTCCAT +
Preference number: 4 (lower is better)
Translates to: EYSSGILQNVPHDLGCLMWMHAQ*NNAKVH
Trigger: ATGGACTTTTGCATTATTTCATTGTGCATGCATCCA...CATCAAGCAACCCAAATCATGTGGGACATTCTGCAGTATACCTGATGAGTACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478500.3
CDS-3UTR GCA 90 bp AGCACTTCCAACTCCAAAAAGGTGATTGGCAATGGTACAGAAAGCAGCTTAAATCCTTCGTGCATGTCTTaGAGGAAATCTAAGTCCTTA +
Preference number: 4 (lower is better)
Translates to: STSNSKKVIGNGTESSLNPSCMS*RKSKSL
Trigger: TAAGGACTTAGATTTCCTGCAAGACATGCACGAAGG...ATTTAAGCTGCTTTCTGTACCATTGCCAATCACCTTTTTGGAGTTGGAAGTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR CCA 90 bp CACTTCCAACTCCAAAAAGGTGATTGGCAATGGTACAGAAAGCAGCTTAAATATCATTCTCATGGAGCGTaGCAAAACGTTGTTCATCAC +
Preference number: 4 (lower is better)
Translates to: HFQLQKGDWQWYRKQLKYHSHGA*QNVVHH
Trigger: GTGATGAACAACGTTTTGCCACGCTCCATGAGAATG...ATATTTAAGCTGCTTTCTGTACCATTGCCAATCACCTTTTTGGAGTTGGAAGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR CCA 90 bp ATTTTTCACATCCCATCTGCTGATCAGCCTGAAGTTGACATCTTGAAAACTCTTCATTCTCATGGAGCGTaGCAAAACGTTGTTCATCAC +
Preference number: 4 (lower is better)
Translates to: IFHIPSADQPEVDILKTLHSHGA*QNVVHH
Trigger: GTGATGAACAACGTTTTGCCACGCTCCATGAGAATG...AAGAGTTTTCAAGATGTCAACTTCAGGCTGATCAGCAGATGGGATGTGAAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR CCA 90 bp ACTTCCAACTCCAAAAAGGTGATTGGCAATGGTACAGAAAGCAGCTTAAATATAGATTTCCCTGGACCCTaGATAGATTCCATGGCTGTT +
Preference number: 4 (lower is better)
Translates to: TSNSKKVIGNGTESSLNIDFPGP*IDSMAV
Trigger: AACAGCCATGGAATCTATCCAGGGTCCAGGGAAATC...TATATTTAAGCTGCTTTCTGTACCATTGCCAATCACCTTTTTGGAGTTGGAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR CCA 90 bp GAGTACTCATCAGGTATACTGCAGAATGTCCCACATGATTTGGGTTGCTTGATGGTCTGCATAAAAGCTTaGTCTATGAACAGAAACAGT +
Preference number: 4 (lower is better)
Translates to: EYSSGILQNVPHDLGCLMVCIKA*SMNRNS
Trigger: ACTGTTTCTGTTCATAGACCAAGCTTTTATGCAGAC...CATCAAGCAACCCAAATCATGTGGGACATTCTGCAGTATACCTGATGAGTACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478500.3
CDS-3UTR CCA 90 bp AGCACTTCCAACTCCAAAAAGGTGATTGGCAATGGTACAGAAAGCAGCTTAAATTCATCCTTCCATTCCTaGCTAATTGAGGACACAATC +
Preference number: 4 (lower is better)
Translates to: STSNSKKVIGNGTESSLNSSFHS*LIEDTI
Trigger: GATTGTGTCCTCAATTAGCCAGGAATGGAAGGATGA...ATTTAAGCTGCTTTCTGTACCATTGCCAATCACCTTTTTGGAGTTGGAAGTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR CCA 90 bp AGCACTTCCAACTCCAAAAAGGTGATTGGCAATGGTACAGAAAGCAGCTTAAATCTCCAAAAAGGTGATTaGCAATGGTACAGAAAGCAG +
Preference number: 4 (lower is better)
Translates to: STSNSKKVIGNGTESSLNLQKGD*QWYRKQ
Trigger: CTGCTTTCTGTACCATTGCCAATCACCTTTTTGGAG...ATTTAAGCTGCTTTCTGTACCATTGCCAATCACCTTTTTGGAGTTGGAAGTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR CCA 90 bp CTTCTCATCTGGCAAAAGAGAAGGAAGTTTAAAGACTGCCACTGGGGAAGAAAAATGTACACGGAATCTTaGGTAAACGAGACAGGATTT +
Preference number: 4 (lower is better)
Translates to: LLIWQKRRKFKDCHWGRKMYTES*VNETGF
Trigger: AAATCCTGTCTCGTTTACCCAAGATTCCGTGTACAT...TTTTCTTCCCCAGTGGCAGTCTTTAAACTTCCTTCTCTTTTGCCAGATGAGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000478500.3
CDS-3UTR TCA 90 bp AGCACTTCCAACTCCAAAAAGGTGATTGGCAATGGTACAGAAAGCAGCTTAAATGATATTAATGCCTCCTaGTTGCATACAATACAGTCC +
Preference number: 4 (lower is better)
Translates to: STSNSKKVIGNGTESSLNDINAS*LHTIQS
Trigger: GGACTGTATTGTATGCAATCAGGAGGCATTAATATC...ATTTAAGCTGCTTTCTGTACCATTGCCAATCACCTTTTTGGAGTTGGAAGTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR TCA 90 bp AGCACTTCCAACTCCAAAAAGGTGATTGGCAATGGTACAGAAAGCAGCTTAAATTCTTCGCTTATACGTTaGGCCTTTCAAGTCATATGT +
Preference number: 4 (lower is better)
Translates to: STSNSKKVIGNGTESSLNSSLIR*AFQVIC
Trigger: ACATATGACTTGAAAGGCTCAACGTATAAGCGAAGA...ATTTAAGCTGCTTTCTGTACCATTGCCAATCACCTTTTTGGAGTTGGAAGTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR TCA 90 bp TCCAACTCCAAAAAGGTGATTGGCAATGGTACAGAAAGCAGCTTAAATATAGTTAGATTCCATGGCTGTTaGGTAGAGAACCTTCTGCAT +
Preference number: 4 (lower is better)
Translates to: SNSKKVIGNGTESSLNIVRFHGC*VENLLH
Trigger: ATGCAGAAGGTTCTCTACTCAACAGCCATGGAATCT...AACTATATTTAAGCTGCTTTCTGTACCATTGCCAATCACCTTTTTGGAGTTGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR TCA 90 bp AAGGTAAATGTTGAACTGGAAGGTAACCCTTTGCTCCATACTATATCCAGATTTAGATTCCATGGCTGTTaGGTAGAGAACCTTCTGCAT +
Preference number: 4 (lower is better)
Translates to: KVNVELEGNPLLHTISRFRFHGC*VENLLH
Trigger: ATGCAGAAGGTTCTCTACTCAACAGCCATGGAATCT...AAATCTGGATATAGTATGGAGCAAAGGGTTACCTTCCAGTTCAACATTTACCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478500.3
CDS-3UTR TCA 90 bp TTTAGACTTCTTGTTTTTGATGACCTTGACAGTTCTGAAGAGTACTCATCAGGTCCGTTTCTTAGACGGTaGAGCCTTCAAAGCTTGAAT +
Preference number: 4 (lower is better)
Translates to: FRLLVFDDLDSSEEYSSGPFLRR*SLQSLN
Trigger: ATTCAAGCTTTGAAGGCTTCACCGTCTAAGAAACGG...ACCTGATGAGTACTCTTCAGAACTGTCAAGGTCATCAAAAACAAGAAGTCTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478500.3
CDS-3UTR TCA 90 bp TTTAGACTTCTTGTTTTTGATGACCTTGACAGTTCTGAAGAGTACTCATCAGGTACTGAAGAACTAGGCTaGACCTTCTCATCTGGCAAA +
Preference number: 4 (lower is better)
Translates to: FRLLVFDDLDSSEEYSSGTEELG*TFSSGK
Trigger: TTTGCCAGATGAGAAGGTTCAGCCTAGTTCTTCAGT...ACCTGATGAGTACTCTTCAGAACTGTCAAGGTCATCAAAAACAAGAAGTCTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478500.3
CDS-3UTR GCA 90 bp ATTTTTCACATCCCATCTGCTGATCAGCCTGAAGTTGACATCTTGAAAACTCTTAAGTCATATGTAAAGTaGATTCTCATGGAGCGTGGC +
Preference number: 4 (lower is better)
Translates to: IFHIPSADQPEVDILKTLKSYVK*ILMERG
Trigger: GCCACGCTCCATGAGAATGCACTTTACATATGACTT...AAGAGTTTTCAAGATGTCAACTTCAGGCTGATCAGCAGATGGGATGTGAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR GCA 90 bp GAGTACTCATCAGGTATACTGCAGAATGTCCCACATGATTTGGGTTGCTTGATGCTTAAATATAGTTCATaGAGTTCTTCACAGTTCAGC +
Preference number: 4 (lower is better)
Translates to: EYSSGILQNVPHDLGCLMLKYSS*SSSQFS
Trigger: GCTGAACTGTGAAGAACTGCATGAACTATATTTAAG...CATCAAGCAACCCAAATCATGTGGGACATTCTGCAGTATACCTGATGAGTACTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478500.3
CDS-3UTR CCA 90 bp ATTTTTCACATCCCATCTGCTGATCAGCCTGAAGTTGACATCTTGAAAACTCTTAAGAACATCTCGTTCTaGCTTGGAAGTGAGATTACC +
Preference number: 4 (lower is better)
Translates to: IFHIPSADQPEVDILKTLKNISF*LGSEIT
Trigger: GGTAATCTCACTTCCAAGCCAGAACGAGATGTTCTT...AAGAGTTTTCAAGATGTCAACTTCAGGCTGATCAGCAGATGGGATGTGAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR CCA 90 bp CACTTCCAACTCCAAAAAGGTGATTGGCAATGGTACAGAAAGCAGCTTAAATATCTTAAATCTAAAGTCTaGGTAGTGATGTGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: HFQLQKGDWQWYRKQLKYLKSKV*VVMCWG
Trigger: ACCCCAGCACATCACTACCCAGACTTTAGATTTAAG...ATATTTAAGCTGCTTTCTGTACCATTGCCAATCACCTTTTTGGAGTTGGAAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR CCA 90 bp TCCAACTCCAAAAAGGTGATTGGCAATGGTACAGAAAGCAGCTTAAATATAGTTCATTCTCATGGAGCGTaGCAAAACGTTGTTCATCAC +
Preference number: 4 (lower is better)
Translates to: SNSKKVIGNGTESSLNIVHSHGA*QNVVHH
Trigger: GTGATGAACAACGTTTTGCCACGCTCCATGAGAATG...AACTATATTTAAGCTGCTTTCTGTACCATTGCCAATCACCTTTTTGGAGTTGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR CCA 90 bp TCCAACTCCAAAAAGGTGATTGGCAATGGTACAGAAAGCAGCTTAAATATAGTTATCTCCAGATTTCCCTaGACCCTGGATAGATTCCAT +
Preference number: 4 (lower is better)
Translates to: SNSKKVIGNGTESSLNIVISRFP*TLDRFH
Trigger: ATGGAATCTATCCAGGGTCCAGGGAAATCTGGAGAT...AACTATATTTAAGCTGCTTTCTGTACCATTGCCAATCACCTTTTTGGAGTTGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR TCA 90 bp CACTTCCAACTCCAAAAAGGTGATTGGCAATGGTACAGAAAGCAGCTTAAATATTATCCTATTCCCAGCTaGATAGCACCTTTAATAGCA +
Preference number: 4 (lower is better)
Translates to: HFQLQKGDWQWYRKQLKYYPIPS*IAPLIA
Trigger: TGCTATTAAAGGTGCTATTCAGCTGGGAATAGGATA...ATATTTAAGCTGCTTTCTGTACCATTGCCAATCACCTTTTTGGAGTTGGAAGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR TCA 90 bp AAGGTAAATGTTGAACTGGAAGGTAACCCTTTGCTCCATACTATATCCAGATTTGTGGATAGTGCTCATTaGCGTATAAGGAAGAAGATG +
Preference number: 4 (lower is better)
Translates to: KVNVELEGNPLLHTISRFVDSAH*RIRKKM
Trigger: CATCTTCTTCCTTATACGTCAATGAGCACTATCCAC...AAATCTGGATATAGTATGGAGCAAAGGGTTACCTTCCAGTTCAACATTTACCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478500.3
CDS-3UTR TCA 90 bp TCCAACTCCAAAAAGGTGATTGGCAATGGTACAGAAAGCAGCTTAAATATAGTTCCAACTCCAAAAAGGTaGTTGGCAATGGTACAGAAA +
Preference number: 4 (lower is better)
Translates to: SNSKKVIGNGTESSLNIVPTPKR*LAMVQK
Trigger: TTTCTGTACCATTGCCAATCACCTTTTTGGAGTTGG...AACTATATTTAAGCTGCTTTCTGTACCATTGCCAATCACCTTTTTGGAGTTGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR TCA 90 bp AAGGTAAATGTTGAACTGGAAGGTAACCCTTTGCTCCATACTATATCCAGATTTCCAACTCCAAAAAGGTaGTTGGCAATGGTACAGAAA +
Preference number: 4 (lower is better)
Translates to: KVNVELEGNPLLHTISRFPTPKR*LAMVQK
Trigger: TTTCTGTACCATTGCCAATCACCTTTTTGGAGTTGG...AAATCTGGATATAGTATGGAGCAAAGGGTTACCTTCCAGTTCAACATTTACCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478500.3
CDS-3UTR GCA 90 bp CACTTCCAACTCCAAAAAGGTGATTGGCAATGGTACAGAAAGCAGCTTAAATATAAATACAACCCTTCGTaGATGTCTTGCAGGAAATCT +
Preference number: 4 (lower is better)
Translates to: HFQLQKGDWQWYRKQLKYKYNPS*MSCRKS
Trigger: AGATTTCCTGCAAGACATGCACGAAGGGTTGTATTT...ATATTTAAGCTGCTTTCTGTACCATTGCCAATCACCTTTTTGGAGTTGGAAGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR CCA 90 bp TCCAACTCCAAAAAGGTGATTGGCAATGGTACAGAAAGCAGCTTAAATATAGTTCTTAAATCTAAAGTCTaGGTAGTGATGTGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: SNSKKVIGNGTESSLNIVLKSKV*VVMCWG
Trigger: ACCCCAGCACATCACTACCCAGACTTTAGATTTAAG...AACTATATTTAAGCTGCTTTCTGTACCATTGCCAATCACCTTTTTGGAGTTGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR CCA 90 bp AGCACTTCCAACTCCAAAAAGGTGATTGGCAATGGTACAGAAAGCAGCTTAAATAAAGGTGATTGGCAATaGTACAGAAAGCAGCTTAAA +
Preference number: 4 (lower is better)
Translates to: STSNSKKVIGNGTESSLNKGDWQ*YRKQLK
Trigger: TTTAAGCTGCTTTCTGTACCATTGCCAATCACCTTT...ATTTAAGCTGCTTTCTGTACCATTGCCAATCACCTTTTTGGAGTTGGAAGTGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR TCA 90 bp AAGGTAAATGTTGAACTGGAAGGTAACCCTTTGCTCCATACTATATCCAGATTTGATATTAATGCCTCCTaGTTGCATACAATACAGTCC +
Preference number: 4 (lower is better)
Translates to: KVNVELEGNPLLHTISRFDINAS*LHTIQS
Trigger: GGACTGTATTGTATGCAATCAGGAGGCATTAATATC...AAATCTGGATATAGTATGGAGCAAAGGGTTACCTTCCAGTTCAACATTTACCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478500.3
CDS-3UTR TCA 90 bp ACTTCCAACTCCAAAAAGGTGATTGGCAATGGTACAGAAAGCAGCTTAAATATATCTTCGCTTATACGTTaGGCCTTTCAAGTCATATGT +
Preference number: 4 (lower is better)
Translates to: TSNSKKVIGNGTESSLNISSLIR*AFQVIC
Trigger: ACATATGACTTGAAAGGCTCAACGTATAAGCGAAGA...TATATTTAAGCTGCTTTCTGTACCATTGCCAATCACCTTTTTGGAGTTGGAAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR TCA 90 bp ATTTTTCACATCCCATCTGCTGATCAGCCTGAAGTTGACATCTTGAAAACTCTTCTGAAGTTGACATCTTaGAAACTCTTAAGTCAGGTT +
Preference number: 4 (lower is better)
Translates to: IFHIPSADQPEVDILKTLLKLTS*KLLSQV
Trigger: AACCTGACTTAAGAGTTTTCAAGATGTCAACTTCAG...AAGAGTTTTCAAGATGTCAACTTCAGGCTGATCAGCAGATGGGATGTGAAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR TCA 90 bp TTTAGACTTCTTGTTTTTGATGACCTTGACAGTTCTGAAGAGTACTCATCAGGTCAGTTGAAACTGATCTaGAGTAATAACAGGCTAGCA +
Preference number: 4 (lower is better)
Translates to: FRLLVFDDLDSSEEYSSGQLKLI*SNNRLA
Trigger: TGCTAGCCTGTTATTACTTCAGATCAGTTTCAACTG...ACCTGATGAGTACTCTTCAGAACTGTCAAGGTCATCAAAAACAAGAAGTCTAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478500.3
CDS-3UTR TCA 90 bp AAGGTAAATGTTGAACTGGAAGGTAACCCTTTGCTCCATACTATATCCAGATTTCATTTCCTTCTGATATaGATAACAGGTGCTCAGATG +
Preference number: 4 (lower is better)
Translates to: KVNVELEGNPLLHTISRFHFLLI*ITGAQM
Trigger: CATCTGAGCACCTGTTATTCATATCAGAAGGAAATG...AAATCTGGATATAGTATGGAGCAAAGGGTTACCTTCCAGTTCAACATTTACCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478500.3
CDS-3UTR GCA 90 bp AGCACTTCCAACTCCAAAAAGGTGATTGGCAATGGTACAGAAAGCAGCTTAAATCCACATGATTTGGGTTaGTTGATGTTTTTCTGTATT +
Preference number: 4 (lower is better)
Translates to: STSNSKKVIGNGTESSLNPHDLG*LMFFCI
Trigger: AATACAGAAAAACATCAAGCAACCCAAATCATGTGG...ATTTAAGCTGCTTTCTGTACCATTGCCAATCACCTTTTTGGAGTTGGAAGTGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000478500.3
CDS-3UTR GCA 90 bp TTTAGACTTCTTGTTTTTGATGACCTTGACAGTTCTGAAGAGTACTCATCAGGTTGGAAGGTAACCCTTTaGTCCATACTATATCCAGAT +
Preference number: 4 (lower is better)
Translates to: FRLLVFDDLDSSEEYSSGWKVTL*SILYPD
Trigger: ATCTGGATATAGTATGGAGCAAAGGGTTACCTTCCA...ACCTGATGAGTACTCTTCAGAACTGTCAAGGTCATCAAAAACAAGAAGTCTAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478500.3
CDS-3UTR CCA 90 bp ATTTTTCACATCCCATCTGCTGATCAGCCTGAAGTTGACATCTTGAAAACTCTTGTCTGCATAAAAGCTTaGTCTATGAACAGAAACAGT +
Preference number: 4 (lower is better)
Translates to: IFHIPSADQPEVDILKTLVCIKA*SMNRNS
Trigger: ACTGTTTCTGTTCATAGACCAAGCTTTTATGCAGAC...AAGAGTTTTCAAGATGTCAACTTCAGGCTGATCAGCAGATGGGATGTGAAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR CCA 90 bp TCCAACTCCAAAAAGGTGATTGGCAATGGTACAGAAAGCAGCTTAAATATAGTTAAGAAGATGAAATTGTaGTTGCCAAGGAAGCAGCTT +
Preference number: 4 (lower is better)
Translates to: SNSKKVIGNGTESSLNIVKKMKL*LPRKQL
Trigger: AAGCTGCTTCCTTGGCAACCACAATTTCATCTTCTT...AACTATATTTAAGCTGCTTTCTGTACCATTGCCAATCACCTTTTTGGAGTTGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR CCA 90 bp CTGGAAGGTAACCCTTTGCTCCATACTATATCCAGATTTTGTTCATTTTCCTTACTGAACCTTCTCATCTaGCAAAAGAGAAGGAAGTTT +
Preference number: 4 (lower is better)
Translates to: LEGNPLLHTISRFCSFSLLNLLI*QKRRKF
Trigger: AAACTTCCTTCTCTTTTGCCAGATGAGAAGGTTCAG...TAAGGAAAATGAACAAAATCTGGATATAGTATGGAGCAAAGGGTTACCTTCCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000478500.3
CDS-3UTR GCA 90 bp ATTTTTCACATCCCATCTGCTGATCAGCCTGAAGTTGACATCTTGAAAACTCTTCTTAAATATAGTTCATaGAGTTCTTCACAGTTCAGC +
Preference number: 4 (lower is better)
Translates to: IFHIPSADQPEVDILKTLLKYSS*SSSQFS
Trigger: GCTGAACTGTGAAGAACTGCATGAACTATATTTAAG...AAGAGTTTTCAAGATGTCAACTTCAGGCTGATCAGCAGATGGGATGTGAAAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS GCA 90 bp AGCAGCGAGCGGCCGCCAAAGCCCAGCAGCTCCGAGCGGCTCCACTaGCGGGCGCAGCCTCGCCGCGGCGCGTTCGGGGACCGGGAACCG +
Preference number: 5 (lower is better)
Translates to: SSERPPKPSSSERLH*RAQPRRGAFGDREP
Trigger: CGGTTCCCGGTCCCCGAACGCGCCGCGGCGAGGCTGCGCCCGGCAGTGGAGCCGCTCGGAGCTGCTGGGCTTTGGCGGCCGCTCGCTGCT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265382.8
CDS GCA 90 bp AACTCGCTCCGGACGCGCCTTGGCGGGGGCGCGCGGCTACGAGTGTaGAGTGCGCGCGCGCCGCGGCGAGTGTGTGTGTCCCCGCTTTCC +
Preference number: 5 (lower is better)
Translates to: NSLRTRLGGGARLRV*SARAPRRVCVSPLS
Trigger: GGAAAGCGGGGACACACACACTCGCCGCGGCGCGCGCGCACTGCACACTCGTAGCCGCGCGCCCCCGCCAAGGCGCGTCCGGAGCGAGTT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265382.8
ENST00000541509.5
CDS GCA 90 bp GTCACAGGACTGGGGTTGGACGGCTCTGCAGTCACATCTCAGCTCTaGTGGGCCTTGGCTTCCTCATCTCACCCGGGCAGCATTCGGGTG +
Preference number: 5 (lower is better)
Translates to: VTGLGLDGSAVTSQL*WALASSSHPGSIRV
Trigger: CACCCGAATGCTGCCCGGGTGAGATGAGGAAGCCAAGGCCCAGCAGAGCTGAGATGTGACTGCAGAGCCGTCCAACCCCAGTCCTGTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265382.8
CDS CCA 90 bp ACAGGACTGGGGTTGGACGGCTCTGCAGTCACATCTCAGCTCTGCTaGGCCTTGGCTTCCTCATCTCACCCGGGCAGCATTCGGGTGCCT +
Preference number: 5 (lower is better)
Translates to: TGLGLDGSAVTSQLC*ALASSSHPGSIRVP
Trigger: AGGCACCCGAATGCTGCCCGGGTGAGATGAGGAAGCCAAGGCCCAGCAGAGCTGAGATGTGACTGCAGAGCCGTCCAACCCCAGTCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265382.8
CDS CCA 90 bp GGGCGCCTAACAAGTTCACCGCTGTTTCGTACCGGGGGAGGGTGGTaGGAGACCTTTCCTTCCGCTGCCAAACTCTGCAGGTTCCCCGGA +
Preference number: 5 (lower is better)
Translates to: GRLTSSPLFRTGGGW*ETFPSAAKLCRFPG
Trigger: TCCGGGGAACCTGCAGAGTTTGGCAGCGGAAGGAAAGGTCTCCCACCACCCTCCCCCGGTACGAAACAGCGGTGAACTTGTTAGGCGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000472907.6
ENST00000474356.1
CDS CCA 90 bp CCAGGGCGCCTAACAAGTTCACCGCTGTTTCGTACCGGGGGAGGGTaGTGGGAGACCTTTCCTTCCGCTGCCAAACTCTGCAGGTTCCCC +
Preference number: 5 (lower is better)
Translates to: PGRLTSSPLFRTGGG*WETFPSAAKLCRFP
Trigger: GGGGAACCTGCAGAGTTTGGCAGCGGAAGGAAAGGTCTCCCACCACCCTCCCCCGGTACGAAACAGCGGTGAACTTGTTAGGCGCCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000472907.6
ENST00000474356.1
CDS-3UTR CAA 90 bp CTGGTGCGGAGAAACTTCTCTGCCATAACTGTGCTCACGTCTCATCCATGTGCTGGCGCGGGTTCCCGCTaGGTGCGCGCCGGAGTCGGA +
Preference number: 5 (lower is better)
Translates to: LVRRNFSAITVLTSHPCAGAGSR*VRAGVG
Trigger: TCCGACTCCGGCGCGCACCAAGCGGGAACCCGCGCC...AGCACATGGATGAGACGTGAGCACAGTTATGGCAGAGAAGTTTCTCCGCACCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265382.8
CDS GCA 90 bp GTCACAGGACTGGGGTTGGACGGCTCTGCAGTCACATCTCAGCTCTaGTGGGCCTTGGCTTCCTCATCTGTGGCTGGCAGACAGCGTGCA +
Preference number: 5 (lower is better)
Translates to: VTGLGLDGSAVTSQL*WALASSSVAGRQRA
Trigger: TGCACGCTGTCTGCCAGCCACAGATGAGGAAGCCAAGGCCCAGCAGAGCTGAGATGTGACTGCAGAGCCGTCCAACCCCAGTCCTGTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377284.5
CDS GCA 90 bp CAGCATTCGGGTGCCTCCGCTACCAAGACCAGTTGCGCCACAGTCTaGAAGTTATCGGGACGTTGTCGCTTCCCCACAGCGAAGGGAGAG +
Preference number: 5 (lower is better)
Translates to: QHSGASATKTSCATV*KLSGRCRFPTAKGE
Trigger: CTCTCCCTTCGCTGTGGGGAAGCGACAACGTCCCGATAACTTGCAGACTGTGGCGCAACTGGTCTTGGTAGCGGAGGCACCCGAATGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265382.8
ENST00000541509.5
CDS GCA 90 bp ATCTCACCCGGGCAGCATTCGGGTGCCTCCGCTACCAAGACCAGTTaGGCCACAGTCTGCAAGTTATCGGGACGTTGTCGCTTCCCCACA +
Preference number: 5 (lower is better)
Translates to: ISPGQHSGASATKTS*ATVCKLSGRCRFPT
Trigger: TGTGGGGAAGCGACAACGTCCCGATAACTTGCAGACTGTGGCGCAACTGGTCTTGGTAGCGGAGGCACCCGAATGCTGCCCGGGTGAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265382.8
CDS GCA 90 bp TTCTCACCCGGGCAGCATTCGGGTGCCTCCGCTACCAAGACCAGTTaGGCCACAGTCTGCAAGTTATCGGGACGTTGTCGCTTCCCCACA +
Preference number: 5 (lower is better)
Translates to: FSPGQHSGASATKTS*ATVCKLSGRCRFPT
Trigger: TGTGGGGAAGCGACAACGTCCCGATAACTTGCAGACTGTGGCGCAACTGGTCTTGGTAGCGGAGGCACCCGAATGCTGCCCGGGTGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541509.5
CDS GCA 90 bp GTCACAGGACTGGGGTTGGACGGCTCTGCAGTCACATCTCAGCTCTaGTGGGCCTTGGCTTCCTCATCTGGTTGTGCAGAAGCAAAACTA +
Preference number: 5 (lower is better)
Translates to: VTGLGLDGSAVTSQL*WALASSSGCAEAKL
Trigger: TAGTTTTGCTTCTGCACAACCAGATGAGGAAGCCAAGGCCCAGCAGAGCTGAGATGTGACTGCAGAGCCGTCCAACCCCAGTCCTGTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437200.5
CDS GCA 90 bp TATCAGGCACCAGAGAAAGGTCACAGGACTGGGGTTGGACGGCTCTaGAGTCACATCTCAGCTCTGCTGGGCCTTGGCTTCCTCATAGAA +
Preference number: 5 (lower is better)
Translates to: YQAPEKGHRTGVGRL*SHISALLGLGFLIE
Trigger: TTCTATGAGGAAGCCAAGGCCCAGCAGAGCTGAGATGTGACTGCAGAGCCGTCCAACCCCAGTCCTGTGACCTTTCTCTGGTGCCTGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472907.6
CDS CCA 90 bp ACAGGACTGGGGTTGGACGGCTCTGCAGTCACATCTCAGCTCTGCTaGGCCTTGGCTTCCTCATCTGGTTGTGCAGAAGCAAAACTATTT +
Preference number: 5 (lower is better)
Translates to: TGLGLDGSAVTSQLC*ALASSSGCAEAKLF
Trigger: AAATAGTTTTGCTTCTGCACAACCAGATGAGGAAGCCAAGGCCCAGCAGAGCTGAGATGTGACTGCAGAGCCGTCCAACCCCAGTCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437200.5
CDS-3UTR CAA 90 bp CTGGTGCGGAGAAACTTCTCTGCCATAACTGTGCTCACGTCTCATCCATGTGCTCAAGTTATCGGGACGTaGTCGCTTCCCCACAGCGAA +
Preference number: 5 (lower is better)
Translates to: LVRRNFSAITVLTSHPCAQVIGT*SLPHSE
Trigger: TTCGCTGTGGGGAAGCGACAACGTCCCGATAACTTG...AGCACATGGATGAGACGTGAGCACAGTTATGGCAGAGAAGTTTCTCCGCACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265382.8
ENST00000541509.5
CDS-3UTR CAA 90 bp AGGTTGATGATTTCTCTGTGTGTAGTGGGGCTCAGCCAAGTTGCTGTGGATAATCAGCTCTGCTGGGCCTaGGCTTCCTCATCTCACCCG +
Preference number: 5 (lower is better)
Translates to: RLMISLCVVGLSQVAVDNQLCWA*ASSSHP
Trigger: CGGGTGAGATGAGGAAGCCAAGGCCCAGCAGAGCTG...ATTATCCACAGCAACTTGGCTGAGCCCCACTACACACAGAGAAATCATCAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265382.8
CDS-3UTR CAA 90 bp GTGGATAATTCTGGTGCGGAGAAACTTCTCTGCCATAACTGTGCTCACGTCTCATGTGCTGGGGTCAGATaGCTCCCTTCGCTGGGTAGG +
Preference number: 5 (lower is better)
Translates to: VDNSGAEKLLCHNCAHVSCAGVR*LPSLGR
Trigger: CCTACCCAGCGAAGGGAGCAATCTGACCCCAGCACA...TGAGACGTGAGCACAGTTATGGCAGAGAAGTTTCTCCGCACCAGAATTATCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR CAA 90 bp GGTGCGGAGAAACTTCTCTGCCATAACTGTGCTCACGTCTCATCCATGTGCTTACAAGTTATCGGGACGTaGTCGCTTCCCCACAGCGAA +
Preference number: 5 (lower is better)
Translates to: GAEKLLCHNCAHVSSMCLQVIGT*SLPHSE
Trigger: TTCGCTGTGGGGAAGCGACAACGTCCCGATAACTTG...TAAGCACATGGATGAGACGTGAGCACAGTTATGGCAGAGAAGTTTCTCCGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265382.8
ENST00000541509.5
CDS-3UTR CAA 90 bp AGGTTGATGATTTCTCTGTGTGTAGTGGGGCTCAGCCAAGTTGCTGTGGATAATTGTGCTGGGGTCAGATaGCTCCCTTCGCTGGGTAGG +
Preference number: 5 (lower is better)
Translates to: RLMISLCVVGLSQVAVDNCAGVR*LPSLGR
Trigger: CCTACCCAGCGAAGGGAGCAATCTGACCCCAGCACA...ATTATCCACAGCAACTTGGCTGAGCCCCACTACACACAGAGAAATCATCAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS GCA 90 bp GTCACAGGACTGGGGTTGGACGGCTCTGCAGTCACATCTCAGCTCTaGTGGGCCTTGGCTTCCTCATCCCTATCTGTATATTTAAAGATA +
Preference number: 5 (lower is better)
Translates to: VTGLGLDGSAVTSQL*WALASSSLSVYLKI
Trigger: TATCTTTAAATATACAGATAGGGATGAGGAAGCCAAGGCCCAGCAGAGCTGAGATGTGACTGCAGAGCCGTCCAACCCCAGTCCTGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440050.5
ENST00000478500.3
CDS CCA 90 bp GAGAACCTTCTGCATCCCAGTCCGCTTAGCATCAGGCACATTTTGTaGGGTCTCCTCCTCTTTCTCTTTGAGGGAATGGTCCAGGAAATG +
Preference number: 5 (lower is better)
Translates to: ENLLHPSPLSIRHIL*GLLLFLFEGMVQEM
Trigger: CATTTCCTGGACCATTCCCTCAAAGAGAAAGAGGAGGAGACCCCACAAAATGTGCCTGATGCTAAGCGGACTGGGATGCAGAAGGTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR CAA 90 bp CTGGTGCGGAGAAACTTCTCTGCCATAACTGTGCTCACGTCTCATCCATGTGCTAGCATCAGGCACATTTaGTGGGGTCTCCTCCTCTTT +
Preference number: 5 (lower is better)
Translates to: LVRRNFSAITVLTSHPCASIRHI*WGLLLF
Trigger: AAAGAGGAGGAGACCCCACAAAATGTGCCTGATGCT...AGCACATGGATGAGACGTGAGCACAGTTATGGCAGAGAAGTTTCTCCGCACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS CCA 90 bp CTTTGTCCTTCAGTCAGCAAATCCCGCTTCTCATCCTTCCATTCCTaGCTAATTGAGGACACAATCTCCTGTGAAGTGGCCTTTAGGGCG +
Preference number: 5 (lower is better)
Translates to: LCPSVSKSRFSSFHS*LIEDTISCEVAFRA
Trigger: CGCCCTAAAGGCCACTTCACAGGAGATTGTGTCCTCAATTAGCCAGGAATGGAAGGATGAGAAGCGGGATTTGCTGACTGAAGGACAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR CAA 90 bp AATTCTGGTGCGGAGAAACTTCTCTGCCATAACTGTGCTCACGTCTCATCCATGTGGGTGGCCTACTCATaGTCGAGACCGTTTTCTTTG +
Preference number: 5 (lower is better)
Translates to: NSGAEKLLCHNCAHVSSMWVAYS*SRPFSL
Trigger: CAAAGAAAACGGTCTCGACAATGAGTAGGCCACCCA...CATGGATGAGACGTGAGCACAGTTATGGCAGAGAAGTTTCTCCGCACCAGAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR CAA 90 bp AGGTTGATGATTTCTCTGTGTGTAGTGGGGCTCAGCCAAGTTGCTGTGGATAATAGGGCGGCGATTGAATaGCACCGTTTCTTAGACGGT +
Preference number: 5 (lower is better)
Translates to: RLMISLCVVGLSQVAVDNRAAIE*HRFLDG
Trigger: ACCGTCTAAGAAACGGTGCAATTCAATCGCCGCCCT...ATTATCCACAGCAACTTGGCTGAGCCCCACTACACACAGAGAAATCATCAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR CAA 90 bp GAGTACTCATCAGGTATACTGCAGAATGTCCCACATGATTTGGGTTGCTTGATGTTGCCCAGGCTGGTCTaGAACTTCCGGACTCAAGAG +
Preference number: 5 (lower is better)
Translates to: EYSSGILQNVPHDLGCLMLPRLV*NFRTQE
Trigger: CTCTTGAGTCCGGAAGTTCAAGACCAGCCTGGGCAA...CATCAAGCAACCCAAATCATGTGGGACATTCTGCAGTATACCTGATGAGTACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478500.3
CDS-3UTR CAA 90 bp GTGGATAATTCTGGTGCGGAGAAACTTCTCTGCCATAACTGTGCTCACGTCTCAACATCTCGTTCTGGCTaGGAAGTGAGATTACCCACT +
Preference number: 5 (lower is better)
Translates to: VDNSGAEKLLCHNCAHVSTSRSG*EVRLPT
Trigger: AGTGGGTAATCTCACTTCCAAGCCAGAACGAGATGT...TGAGACGTGAGCACAGTTATGGCAGAGAAGTTTCTCCGCACCAGAATTATCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS CCA 90 bp TTGAAATACTGCCTCTTCATGAGACACAGGGCAGGAGGTTCTCGTTaGATATCCTTTCCCTTCACTCAACCCTCTAATGGCTTCTCATCA +
Preference number: 5 (lower is better)
Translates to: LKYCLFMRHRAGGSR*ISFPFTQPSNGFSS
Trigger: TGATGAGAAGCCATTAGAGGGTTGAGTGAAGGGAAAGGATATCCAACGAGAACCTCCTGCCCTGTGTCTCATGAAGAGGCAGTATTTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472907.6
CDS-3UTR CAA 90 bp TCCAACTCCAAAAAGGTGATTGGCAATGGTACAGAAAGCAGCTTAAATATAGTTGTCACAGGACTGGGGTaGGACGGCTCTGCAGTCACA +
Preference number: 5 (lower is better)
Translates to: SNSKKVIGNGTESSLNIVVTGLG*DGSAVT
Trigger: TGTGACTGCAGAGCCGTCCAACCCCAGTCCTGTGAC...AACTATATTTAAGCTGCTTTCTGTACCATTGCCAATCACCTTTTTGGAGTTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265382.8
ENST00000478500.3
CDS-3UTR CAA 90 bp GAGTACTCATCAGGTATACTGCAGAATGTCCCACATGATTTGGGTTGCTTGATGTGGGTGGCCTACTCATaGTCGAGACCGTTTTCTTTG +
Preference number: 5 (lower is better)
Translates to: EYSSGILQNVPHDLGCLMWVAYS*SRPFSL
Trigger: CAAAGAAAACGGTCTCGACAATGAGTAGGCCACCCA...CATCAAGCAACCCAAATCATGTGGGACATTCTGCAGTATACCTGATGAGTACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478500.3
CDS-3UTR CAA 90 bp AAGGTAAATGTTGAACTGGAAGGTAACCCTTTGCTCCATACTATATCCAGATTTTGTGCTGGGGTCAGATaGCTCCCTTCGCTGGGTAGG +
Preference number: 5 (lower is better)
Translates to: KVNVELEGNPLLHTISRFCAGVR*LPSLGR
Trigger: CCTACCCAGCGAAGGGAGCAATCTGACCCCAGCACA...AAATCTGGATATAGTATGGAGCAAAGGGTTACCTTCCAGTTCAACATTTACCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478500.3
CDS-3UTR CAA 90 bp TCTGGTGCGGAGAAACTTCTCTGCCATAACTGTGCTCACGTCTCATCCATGTGCTGTCTGCATAAAAGCTaGGTCTATGAACAGAAACAG +
Preference number: 5 (lower is better)
Translates to: SGAEKLLCHNCAHVSSMCCLHKS*VYEQKQ
Trigger: CTGTTTCTGTTCATAGACCAAGCTTTTATGCAGACA...GCACATGGATGAGACGTGAGCACAGTTATGGCAGAGAAGTTTCTCCGCACCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR CAA 90 bp TTCCAGAGTGTTGGGCTCAGCGGTCAAGTAGATGGTCCCCTCTTCCAAGGTAAATGTCTGCATAAAAGCTaGGTCTATGAACAGAAACAG +
Preference number: 5 (lower is better)
Translates to: FQSVGLSGQVDGPLFQGKCLHKS*VYEQKQ
Trigger: CTGTTTCTGTTCATAGACCAAGCTTTTATGCAGACA...TTTACCTTGGAAGAGGGGACCATCTACTTGACCGCTGAGCCCAACACTCTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478500.3
CDS-3UTR CAA 90 bp AAGTTGCTGTGGATAATTCTGGTGCGGAGAAACTTCTCTGCCATAACTGTGCTCTCAAGCACAGAAGCATaGTCATCCTGCACTTCCAGA +
Preference number: 5 (lower is better)
Translates to: KLLWIILVRRNFSAITVLSSTEA*SSCTSR
Trigger: TCTGGAAGTGCAGGATGACAATGCTTCTGTGCTTGA...GAGCACAGTTATGGCAGAGAAGTTTCTCCGCACCAGAATTATCCACAGCAACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265382.8
ENST00000478500.3
CDS-3UTR CAA 90 bp CTGGTGCGGAGAAACTTCTCTGCCATAACTGTGCTCACGTCTCATCCATGTGCTTTGGCAAAAGAGTCCTaGGATTCTGGTTTAAATTCA +
Preference number: 5 (lower is better)
Translates to: LVRRNFSAITVLTSHPCALAKES*DSGLNS
Trigger: TGAATTTAAACCAGAATCCAAGGACTCTTTTGCCAA...AGCACATGGATGAGACGTGAGCACAGTTATGGCAGAGAAGTTTCTCCGCACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR CAA 90 bp AATTCTGGTGCGGAGAAACTTCTCTGCCATAACTGTGCTCACGTCTCATCCATGCTCTTCGCTTATACGTaGAGCCTTTCAAGTCATATG +
Preference number: 5 (lower is better)
Translates to: NSGAEKLLCHNCAHVSSMLFAYT*SLSSHM
Trigger: CATATGACTTGAAAGGCTCAACGTATAAGCGAAGAG...CATGGATGAGACGTGAGCACAGTTATGGCAGAGAAGTTTCTCCGCACCAGAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR CAA 90 bp AGCACTTCCAACTCCAAAAAGGTGATTGGCAATGGTACAGAAAGCAGCTTAAATAGGGCGGCGATTGAATaGCACCGTTTCTTAGACGGT +
Preference number: 5 (lower is better)
Translates to: STSNSKKVIGNGTESSLNRAAIE*HRFLDG
Trigger: ACCGTCTAAGAAACGGTGCAATTCAATCGCCGCCCT...ATTTAAGCTGCTTTCTGTACCATTGCCAATCACCTTTTTGGAGTTGGAAGTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR CAA 90 bp AAGGTAAATGTTGAACTGGAAGGTAACCCTTTGCTCCATACTATATCCAGATTTCAGCTCTGCTGGGCCTaGGCTTCCTCATCCCTATCT +
Preference number: 5 (lower is better)
Translates to: KVNVELEGNPLLHTISRFQLCWA*ASSSLS
Trigger: AGATAGGGATGAGGAAGCCAAGGCCCAGCAGAGCTG...AAATCTGGATATAGTATGGAGCAAAGGGTTACCTTCCAGTTCAACATTTACCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478500.3
CDS-3UTR CAA 90 bp TCTGGTGCGGAGAAACTTCTCTGCCATAACTGTGCTCACGTCTCATCCATGTGCTTGTTTTTGATGACCTaGACAGTTCTGAAGAGTACT +
Preference number: 5 (lower is better)
Translates to: SGAEKLLCHNCAHVSSMCLFLMT*TVLKST
Trigger: AGTACTCTTCAGAACTGTCAAGGTCATCAAAAACAA...GCACATGGATGAGACGTGAGCACAGTTATGGCAGAGAAGTTTCTCCGCACCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478500.3
CDS-3UTR CAA 90 bp CACTTCCAACTCCAAAAAGGTGATTGGCAATGGTACAGAAAGCAGCTTAAATATTCGAGACCGTTTTCTTaGCCAGGTTTCTCACCCGGG +
Preference number: 5 (lower is better)
Translates to: HFQLQKGDWQWYRKQLKYSRPFS*PGFSPG
Trigger: CCCGGGTGAGAAACCTGGCAAAGAAAACGGTCTCGA...ATATTTAAGCTGCTTTCTGTACCATTGCCAATCACCTTTTTGGAGTTGGAAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541509.5
CDS CCA 90 bp CACACTTTCCACCACATAAAAGTCTTGCATAAGAACATCTCGTTCTaGCTTGGAAGTGAGATTACCCACTGTGTATCCTATTCCCAGCTG +
Preference number: 5 (lower is better)
Translates to: HTFHHIKVLHKNISF*LGSEITHCVSYSQL
Trigger: CAGCTGGGAATAGGATACACAGTGGGTAATCTCACTTCCAAGCCAGAACGAGATGTTCTTATGCAAGACTTTTATGTGGTGGAAAGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265382.8
ENST00000377284.5
ENST00000437200.5
ENST00000440050.5
ENST00000478500.3
ENST00000541509.5
CDS-3UTR CAA 90 bp AGGTTGATGATTTCTCTGTGTGTAGTGGGGCTCAGCCAAGTTGCTGTGGATAATCTCTTCGCTTATACGTaGAGCCTTTCAAGTCATATG +
Preference number: 5 (lower is better)
Translates to: RLMISLCVVGLSQVAVDNLFAYT*SLSSHM
Trigger: CATATGACTTGAAAGGCTCAACGTATAAGCGAAGAG...ATTATCCACAGCAACTTGGCTGAGCCCCACTACACACAGAGAAATCATCAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR CAA 90 bp GGTGCGGAGAAACTTCTCTGCCATAACTGTGCTCACGTCTCATCCATGTGCTTAGTTTTCATAAGCGCGTaGTATGTTTCCGTATCAAAA +
Preference number: 5 (lower is better)
Translates to: GAEKLLCHNCAHVSSMCLVFISA*YVSVSK
Trigger: TTTTGATACGGAAACATACAACGCGCTTATGAAAAC...TAAGCACATGGATGAGACGTGAGCACAGTTATGGCAGAGAAGTTTCTCCGCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR CAA 90 bp AATTCTGGTGCGGAGAAACTTCTCTGCCATAACTGTGCTCACGTCTCATCCATGAATGTCCCACATGATTaGGGTTGCTTGATGTTTTTC +
Preference number: 5 (lower is better)
Translates to: NSGAEKLLCHNCAHVSSMNVPHD*GCLMFF
Trigger: GAAAAACATCAAGCAACCCAAATCATGTGGGACATT...CATGGATGAGACGTGAGCACAGTTATGGCAGAGAAGTTTCTCCGCACCAGAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478500.3
CDS TCA 90 bp TCACTGGGGGCATGCTTAACAGTCCTTTGTGTATTGCAGTTTCCATaGTGTGTCCTCATTGCTATCAGAACTGAAATGATGGCAGAATAC +
Preference number: 5 (lower is better)
Translates to: SLGACLTVLCVLQFP*CVLIAIRTEMMAEY
Trigger: GTATTCTGCCATCATTTCAGTTCTGATAGCAATGAGGACACATCATGGAAACTGCAATACACAAAGGACTGTTAAGCATGCCCCCAGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474356.1
CDS TCA 90 bp TCTGGCTTGGAAGTGAGATTACCCACTGTGTATCCTATTCCCAGCTaGATAGCACCTTTAATAGCAGATGATGCAGTTGAAACTGATCTG +
Preference number: 5 (lower is better)
Translates to: SGLEVRLPTVYPIPS*IAPLIADDAVETDL
Trigger: CAGATCAGTTTCAACTGCATCATCTGCTATTAAAGGTGCTATTCAGCTGGGAATAGGATACACAGTGGGTAATCTCACTTCCAAGCCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478500.3
CDS-3UTR CAA 90 bp AAGTTGCTGTGGATAATTCTGGTGCGGAGAAACTTCTCTGCCATAACTGTGCTCACAGTCCGTAAAATTTaGGCAAAAGAGTCCTTGGAT +
Preference number: 5 (lower is better)
Translates to: KLLWIILVRRNFSAITVLTVRKI*AKESLD
Trigger: ATCCAAGGACTCTTTTGCCAAAATTTTACGGACTGT...GAGCACAGTTATGGCAGAGAAGTTTCTCCGCACCAGAATTATCCACAGCAACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR CAA 90 bp AATTCTGGTGCGGAGAAACTTCTCTGCCATAACTGTGCTCACGTCTCATCCATGGTTTTCATAAGCGCGTaGTATGTTTCCGTATCAAAA +
Preference number: 5 (lower is better)
Translates to: NSGAEKLLCHNCAHVSSMVFISA*YVSVSK
Trigger: TTTTGATACGGAAACATACAACGCGCTTATGAAAAC...CATGGATGAGACGTGAGCACAGTTATGGCAGAGAAGTTTCTCCGCACCAGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR CAA 90 bp CACTTCCAACTCCAAAAAGGTGATTGGCAATGGTACAGAAAGCAGCTTAAATATAGCATCAGGCACATTTaGTGGGGTCTCCTCCTCTTT +
Preference number: 5 (lower is better)
Translates to: HFQLQKGDWQWYRKQLKYSIRHI*WGLLLF
Trigger: AAAGAGGAGGAGACCCCACAAAATGTGCCTGATGCT...ATATTTAAGCTGCTTTCTGTACCATTGCCAATCACCTTTTTGGAGTTGGAAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR CAA 90 bp CACTTCCAACTCCAAAAAGGTGATTGGCAATGGTACAGAAAGCAGCTTAAATATACATCTCGTTCTGGCTaGGAAGTGAGATTACCCACT +
Preference number: 5 (lower is better)
Translates to: HFQLQKGDWQWYRKQLKYTSRSG*EVRLPT
Trigger: AGTGGGTAATCTCACTTCCAAGCCAGAACGAGATGT...ATATTTAAGCTGCTTTCTGTACCATTGCCAATCACCTTTTTGGAGTTGGAAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR CAA 90 bp AAGTTGCTGTGGATAATTCTGGTGCGGAGAAACTTCTCTGCCATAACTGTGCTCGTTTTCATAAGCGCGTaGTATGTTTCCGTATCAAAA +
Preference number: 5 (lower is better)
Translates to: KLLWIILVRRNFSAITVLVFISA*YVSVSK
Trigger: TTTTGATACGGAAACATACAACGCGCTTATGAAAAC...GAGCACAGTTATGGCAGAGAAGTTTCTCCGCACCAGAATTATCCACAGCAACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR CAA 90 bp ACTTCCAACTCCAAAAAGGTGATTGGCAATGGTACAGAAAGCAGCTTAAATATAAGCATCAGGCACATTTaGTGGGGTCTCCTCCTCTTT +
Preference number: 5 (lower is better)
Translates to: TSNSKKVIGNGTESSLNISIRHI*WGLLLF
Trigger: AAAGAGGAGGAGACCCCACAAAATGTGCCTGATGCT...TATATTTAAGCTGCTTTCTGTACCATTGCCAATCACCTTTTTGGAGTTGGAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR CAA 90 bp AAGGTAAATGTTGAACTGGAAGGTAACCCTTTGCTCCATACTATATCCAGATTTGATGGATTGAGCATATaGCCCAGGCTGGTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: KVNVELEGNPLLHTISRFDGLSI*PRLVLN
Trigger: GTTCAAGACCAGCCTGGGCAATATGCTCAATCCATC...AAATCTGGATATAGTATGGAGCAAAGGGTTACCTTCCAGTTCAACATTTACCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478500.3
CDS TCA 90 bp ATACAAACGTTTTGTTTTATATGTGAGACACTTGAGACTTGGAAGTaGTATGATGGCCCAGGTCATACGGCCAAATGTAGTCCCAGAACT +
Preference number: 5 (lower is better)
Translates to: IQTFCFICETLETWK*YDGPGHTAKCSPRT
Trigger: AGTTCTGGGACTACATTTGGCCGTATGACCTGGGCCATCATATCACTTCCAAGTCTCAAGTGTCTCACATATAAAACAAAACGTTTGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474356.1
CDS-3UTR CAA 90 bp ACTTCCAACTCCAAAAAGGTGATTGGCAATGGTACAGAAAGCAGCTTAAATATATCGAGACCGTTTTCTTaGCCAGGTTTCTTTCACCTC +
Preference number: 5 (lower is better)
Translates to: TSNSKKVIGNGTESSLNISRPFS*PGFFHL
Trigger: GAGGTGAAAGAAACCTGGCAAAGAAAACGGTCTCGA...TATATTTAAGCTGCTTTCTGTACCATTGCCAATCACCTTTTTGGAGTTGGAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265382.8
ENST00000478500.3
CDS-3UTR CAA 90 bp TTTAGACTTCTTGTTTTTGATGACCTTGACAGTTCTGAAGAGTACTCATCAGGTTCGAGACCGTTTTCTTaGCCAGGTTTCTTTCACCTC +
Preference number: 5 (lower is better)
Translates to: FRLLVFDDLDSSEEYSSGSRPFS*PGFFHL
Trigger: GAGGTGAAAGAAACCTGGCAAAGAAAACGGTCTCGA...ACCTGATGAGTACTCTTCAGAACTGTCAAGGTCATCAAAAACAAGAAGTCTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478500.3
CDS-3UTR CAA 90 bp AGCACTTCCAACTCCAAAAAGGTGATTGGCAATGGTACAGAAAGCAGCTTAAATCTCTTCGCTTATACGTaGAGCCTTTCAAGTCATATG +
Preference number: 5 (lower is better)
Translates to: STSNSKKVIGNGTESSLNLFAYT*SLSSHM
Trigger: CATATGACTTGAAAGGCTCAACGTATAAGCGAAGAG...ATTTAAGCTGCTTTCTGTACCATTGCCAATCACCTTTTTGGAGTTGGAAGTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR CAA 90 bp TCCAACTCCAAAAAGGTGATTGGCAATGGTACAGAAAGCAGCTTAAATATAGTTTCAAGCACAGAAGCATaGTCATCCTGCACTTCCAGA +
Preference number: 5 (lower is better)
Translates to: SNSKKVIGNGTESSLNIVSSTEA*SSCTSR
Trigger: TCTGGAAGTGCAGGATGACAATGCTTCTGTGCTTGA...AACTATATTTAAGCTGCTTTCTGTACCATTGCCAATCACCTTTTTGGAGTTGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265382.8
ENST00000478500.3
CDS TCA 90 bp TTGTGTATTGCAGTTTCCATGATGTGTCCTCATTGCTATCAGAACTaGAATGATGGCAGAATACACAAAGCAATGGACTGGACATCAGAA +
Preference number: 5 (lower is better)
Translates to: LCIAVSMMCPHCYQN*NDGRIHKAMDWTSE
Trigger: TTCTGATGTCCAGTCCATTGCTTTGTGTATTCTGCCATCATTTCAGTTCTGATAGCAATGAGGACACATCATGGAAACTGCAATACACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474356.1
CDS-3UTR CAA 90 bp CTTCTCATCTGGCAAAAGAGAAGGAAGTTTAAAGACTGCCACTGGGGAAGAAAATTGGCAAAAGAGTCCTaGGATTCTGGTTTAAATTCA +
Preference number: 5 (lower is better)
Translates to: LLIWQKRRKFKDCHWGRKLAKES*DSGLNS
Trigger: TGAATTTAAACCAGAATCCAAGGACTCTTTTGCCAA...TTTTCTTCCCCAGTGGCAGTCTTTAAACTTCCTTCTCTTTTGCCAGATGAGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000478500.3
CDS-3UTR CAA 90 bp AGCACTTCCAACTCCAAAAAGGTGATTGGCAATGGTACAGAAAGCAGCTTAAATTTGGCAAAAGAGTCCTaGGATTCTGGTTTAAATTCA +
Preference number: 5 (lower is better)
Translates to: STSNSKKVIGNGTESSLNLAKES*DSGLNS
Trigger: TGAATTTAAACCAGAATCCAAGGACTCTTTTGCCAA...ATTTAAGCTGCTTTCTGTACCATTGCCAATCACCTTTTTGGAGTTGGAAGTGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR CAA 90 bp ATTTTTCACATCCCATCTGCTGATCAGCCTGAAGTTGACATCTTGAAAACTCTTCCTGAAGTTGACATCTaGAAAACTCTTAAGTCAGGT +
Preference number: 5 (lower is better)
Translates to: IFHIPSADQPEVDILKTLPEVDI*KTLKSG
Trigger: ACCTGACTTAAGAGTTTTCAAGATGTCAACTTCAGG...AAGAGTTTTCAAGATGTCAACTTCAGGCTGATCAGCAGATGGGATGTGAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS-3UTR CAA 90 bp CTGGAAGGTAACCCTTTGCTCCATACTATATCCAGATTTTGTTCATTTTCCTTAAATGTACACGGAATCTaGGGTAAACGAGACAGGATT +
Preference number: 5 (lower is better)
Translates to: LEGNPLLHTISRFCSFSLNVHGI*GKRDRI
Trigger: AATCCTGTCTCGTTTACCCAAGATTCCGTGTACATT...TAAGGAAAATGAACAAAATCTGGATATAGTATGGAGCAAAGGGTTACCTTCCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478500.3
CDS-3UTR CAA 90 bp TCCAACTCCAAAAAGGTGATTGGCAATGGTACAGAAAGCAGCTTAAATATAGTTTGTGTTGGTCCATGCTaGAATGAATGTACACGGAAT +
Preference number: 5 (lower is better)
Translates to: SNSKKVIGNGTESSLNIVCVGPC*NECTRN
Trigger: ATTCCGTGTACATTCATTCAAGCATGGACCAACACA...AACTATATTTAAGCTGCTTTCTGTACCATTGCCAATCACCTTTTTGGAGTTGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478500.3
CDS-3UTR CAA 90 bp AAGGTAAATGTTGAACTGGAAGGTAACCCTTTGCTCCATACTATATCCAGATTTACAGTCCGTAAAATTTaGGCAAAAGAGTCCTTGGAT +
Preference number: 5 (lower is better)
Translates to: KVNVELEGNPLLHTISRFTVRKI*AKESLD
Trigger: ATCCAAGGACTCTTTTGCCAAAATTTTACGGACTGT...AAATCTGGATATAGTATGGAGCAAAGGGTTACCTTCCAGTTCAACATTTACCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478500.3
CDS GCA 72 bp CGGCCGCCAAAGCCCAGCAGCTCCGAGCGGCTCCACTaGCGGGCGCAGCCTCGCCGCGGCGCGTTCGGGGAC +
Preference number: 6 (lower is better)
Translates to: RPPKPSSSERLH*RAQPRRGAFGD
Trigger: GTCCCCGAACGCGCCGCGGCGAGGCTGCGCCCGGCAGTGGAGCCGCTCGGAGCTGCTGGGCTTTGGCGGCCG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265382.8
CDS CCA 72 bp TGGAGCCGCGGGGCCAAACTCGCTCCGGACGCGCCTTaGCGGGGGCGCGCGGCTACGAGTGTGCAGTGCGCG +
Preference number: 6 (lower is better)
Translates to: WSRGAKLAPDAP*RGRAATSVQCA
Trigger: CGCGCACTGCACACTCGTAGCCGCGCGCCCCCGCCAAGGCGCGTCCGGAGCGAGTTTGGCCCCGCGGCTCCA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265382.8
ENST00000541509.5
CDS CAA 72 bp CTGGAGCCGCGGGGCCAAACTCGCTCCGGACGCGCCTaGGCGGGGGCGCGCGGCTACGAGTGTGCAGTGCGC +
Preference number: 6 (lower is better)
Translates to: LEPRGQTRSGRA*AGARGYECAVR
Trigger: GCGCACTGCACACTCGTAGCCGCGCGCCCCCGCCAAGGCGCGTCCGGAGCGAGTTTGGCCCCGCGGCTCCAG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265382.8
ENST00000541509.5
CDS GCA 72 bp CTGGGGTTGGACGGCTCTGCAGTCACATCTCAGCTCTaGTGGGCCTTGGCTTCCTCATCTCACCCGGGCAGC +
Preference number: 6 (lower is better)
Translates to: LGLDGSAVTSQL*WALASSSHPGS
Trigger: GCTGCCCGGGTGAGATGAGGAAGCCAAGGCCCAGCAGAGCTGAGATGTGACTGCAGAGCCGTCCAACCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265382.8
CDS CAA 90 bp CGCTACCAAGACCAGTTGCGCCACAGTCTGCAAGTTATCGGGACGTaGTCGCTTCCCCACAGCGAAGGGAGAGCAGTGCAGGCGAGGGGC +
Preference number: 6 (lower is better)
Translates to: RYQDQLRHSLQVIGT*SLPHSEGRAVQARG
Trigger: GCCCCTCGCCTGCACTGCTCTCCCTTCGCTGTGGGGAAGCGACAACGTCCCGATAACTTGCAGACTGTGGCGCAACTGGTCTTGGTAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265382.8
ENST00000541509.5
CDS GCA 72 bp CCTTGGCTTCCTCATCTCACCCGGGCAGCATTCGGGTaGCTCCGCTACCAAGACCAGTTGCGCCACAGTCTG +
Preference number: 6 (lower is better)
Translates to: PWLPHLTRAAFG*LRYQDQLRHSL
Trigger: CAGACTGTGGCGCAACTGGTCTTGGTAGCGGAGGCACCCGAATGCTGCCCGGGTGAGATGAGGAAGCCAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265382.8
CDS CAA 72 bp GACGGCTCTGCAGTCACATCTCAGCTCTGCTGGGCCTaGGCTTCCTCATCTCACCCGGGCAGCATTCGGGTG +
Preference number: 6 (lower is better)
Translates to: DGSAVTSQLCWA*ASSSHPGSIRV
Trigger: CACCCGAATGCTGCCCGGGTGAGATGAGGAAGCCAAGGCCCAGCAGAGCTGAGATGTGACTGCAGAGCCGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265382.8
CDS CAA 90 bp CATCTCACCCGGGCAGCATTCGGGTGCCTCCGCTACCAAGACCAGTaGCGCCACAGTCTGCAAGTTATCGGGACGTTGTCGCTTCCCCAC +
Preference number: 6 (lower is better)
Translates to: HLTRAAFGCLRYQDQ*RHSLQVIGTLSLPH
Trigger: GTGGGGAAGCGACAACGTCCCGATAACTTGCAGACTGTGGCGCAACTGGTCTTGGTAGCGGAGGCACCCGAATGCTGCCCGGGTGAGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265382.8
CDS GCA 72 bp GGTGCCTCCGCTACCAAGACCAGTTGCGCCACAGTCTaGAAGTTATCGGGACGTTGTCGCTTCCCCACAGCG +
Preference number: 6 (lower is better)
Translates to: GASATKTSCATV*KLSGRCRFPTA
Trigger: CGCTGTGGGGAAGCGACAACGTCCCGATAACTTGCAGACTGTGGCGCAACTGGTCTTGGTAGCGGAGGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265382.8
ENST00000541509.5
CDS GCA 72 bp GGGCAGCATTCGGGTGCCTCCGCTACCAAGACCAGTTaGGCCACAGTCTGCAAGTTATCGGGACGTTGTCGC +
Preference number: 6 (lower is better)
Translates to: GQHSGASATKTS*ATVCKLSGRCR
Trigger: GCGACAACGTCCCGATAACTTGCAGACTGTGGCGCAACTGGTCTTGGTAGCGGAGGCACCCGAATGCTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265382.8
ENST00000541509.5
CDS CCA 72 bp GGGTTGGACGGCTCTGCAGTCACATCTCAGCTCTGCTaGGCCTTGGCTTCCTCATCTCACCCGGGCAGCATT +
Preference number: 6 (lower is better)
Translates to: GLDGSAVTSQLC*ALASSSHPGSI
Trigger: AATGCTGCCCGGGTGAGATGAGGAAGCCAAGGCCCAGCAGAGCTGAGATGTGACTGCAGAGCCGTCCAACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265382.8
CDS CAA 72 bp GACGGCTCTGCAGTCACATCTCAGCTCTGCTGGGCCTaGGCTTCCTCATCTGTGGCTGGCAGACAGCGTGCA +
Preference number: 6 (lower is better)
Translates to: DGSAVTSQLCWA*ASSSVAGRQRA
Trigger: TGCACGCTGTCTGCCAGCCACAGATGAGGAAGCCAAGGCCCAGCAGAGCTGAGATGTGACTGCAGAGCCGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377284.5
CDS CAA 90 bp TTTCTCACCCGGGCAGCATTCGGGTGCCTCCGCTACCAAGACCAGTaGCGCCACAGTCTGCAAGTTATCGGGACGTTGTCGCTTCCCCAC +
Preference number: 6 (lower is better)
Translates to: FLTRAAFGCLRYQDQ*RHSLQVIGTLSLPH
Trigger: GTGGGGAAGCGACAACGTCCCGATAACTTGCAGACTGTGGCGCAACTGGTCTTGGTAGCGGAGGCACCCGAATGCTGCCCGGGTGAGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541509.5
CDS GCA 72 bp CCAGAGAAAGGTCACAGGACTGGGGTTGGACGGCTCTaGAGTCACATCTCAGCTCTGCTGGGCCTTGGCTTC +
Preference number: 6 (lower is better)
Translates to: PEKGHRTGVGRL*SHISALLGLGF
Trigger: GAAGCCAAGGCCCAGCAGAGCTGAGATGTGACTGCAGAGCCGTCCAACCCCAGTCCTGTGACCTTTCTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265382.8
ENST00000377284.5
ENST00000437200.5
ENST00000440050.5
ENST00000472907.6
ENST00000478500.3
CDS GCA 72 bp TTCTTTGCCAGGTTTCTCACCCGGGCAGCATTCGGGTaGCTCCGCTACCAAGACCAGTTGCGCCACAGTCTG +
Preference number: 6 (lower is better)
Translates to: FFARFLTRAAFG*LRYQDQLRHSL
Trigger: CAGACTGTGGCGCAACTGGTCTTGGTAGCGGAGGCACCCGAATGCTGCCCGGGTGAGAAACCTGGCAAAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541509.5
CDS CCA 72 bp ACAAGTTCACCGCTGTTTCGTACCGGGGGAGGGTGGTaGGAGACCTTTCCTTCCGCTGCCAAACTCTGCAGG +
Preference number: 6 (lower is better)
Translates to: TSSPLFRTGGGW*ETFPSAAKLCR
Trigger: CCTGCAGAGTTTGGCAGCGGAAGGAAAGGTCTCCCACCACCCTCCCCCGGTACGAAACAGCGGTGAACTTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000472907.6
ENST00000474356.1
CDS CAA 72 bp GACCAGTTGCGCCACAGTCTGCAAGTTATCGGGACGTaGTCGCTTCCCCACAGCGAAGGGAGAGCAGTGCAG +
Preference number: 6 (lower is better)
Translates to: DQLRHSLQVIGT*SLPHSEGRAVQ
Trigger: CTGCACTGCTCTCCCTTCGCTGTGGGGAAGCGACAACGTCCCGATAACTTGCAGACTGTGGCGCAACTGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265382.8
ENST00000541509.5
CDS GCA 72 bp CTGGGGTTGGACGGCTCTGCAGTCACATCTCAGCTCTaGTGGGCCTTGGCTTCCTCATCTGGTTGTGCAGAA +
Preference number: 6 (lower is better)
Translates to: LGLDGSAVTSQL*WALASSSGCAE
Trigger: TTCTGCACAACCAGATGAGGAAGCCAAGGCCCAGCAGAGCTGAGATGTGACTGCAGAGCCGTCCAACCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437200.5
CDS CCA 72 bp GTATCAGGCACCAGAGAAAGGTCACAGGACTGGGGTTaGACGGCTCTGCAGTCACATCTCAGCTCTGCTGGG +
Preference number: 6 (lower is better)
Translates to: VSGTRERSQDWG*TALQSHLSSAG
Trigger: CCCAGCAGAGCTGAGATGTGACTGCAGAGCCGTCCAACCCCAGTCCTGTGACCTTTCTCTGGTGCCTGATAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265382.8
ENST00000377284.5
ENST00000437200.5
ENST00000440050.5
ENST00000472907.6
ENST00000478500.3
CDS CCA 72 bp GGGTTGGACGGCTCTGCAGTCACATCTCAGCTCTGCTaGGCCTTGGCTTCCTCATCTGGTTGTGCAGAAGCA +
Preference number: 6 (lower is better)
Translates to: GLDGSAVTSQLC*ALASSSGCAEA
Trigger: TGCTTCTGCACAACCAGATGAGGAAGCCAAGGCCCAGCAGAGCTGAGATGTGACTGCAGAGCCGTCCAACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437200.5
CDS CCA 72 bp CTAACAAGTTCACCGCTGTTTCGTACCGGGGGAGGGTaGTGGGAGACCTTTCCTTCCGCTGCCAAACTCTGC +
Preference number: 6 (lower is better)
Translates to: LTSSPLFRTGGG*WETFPSAAKLC
Trigger: GCAGAGTTTGGCAGCGGAAGGAAAGGTCTCCCACCACCCTCCCCCGGTACGAAACAGCGGTGAACTTGTTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000472907.6
ENST00000474356.1
CDS GCA 72 bp CTGGGGTTGGACGGCTCTGCAGTCACATCTCAGCTCTaGTGGGCCTTGGCTTCCTCATCCCTATCTGTATAT +
Preference number: 6 (lower is better)
Translates to: LGLDGSAVTSQL*WALASSSLSVY
Trigger: ATATACAGATAGGGATGAGGAAGCCAAGGCCCAGCAGAGCTGAGATGTGACTGCAGAGCCGTCCAACCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440050.5
ENST00000478500.3
CDS CCA 72 bp CTGCATCCCAGTCCGCTTAGCATCAGGCACATTTTGTaGGGTCTCCTCCTCTTTCTCTTTGAGGGAATGGTC +
Preference number: 6 (lower is better)
Translates to: LHPSPLSIRHIL*GLLLFLFEGMV
Trigger: GACCATTCCCTCAAAGAGAAAGAGGAGGAGACCCCACAAAATGTGCCTGATGCTAAGCGGACTGGGATGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS CCA 72 bp GGGTTGGACGGCTCTGCAGTCACATCTCAGCTCTGCTaGGCCTTGGCTTCCTCATCCCTATCTGTATATTTA +
Preference number: 6 (lower is better)
Translates to: GLDGSAVTSQLC*ALASSSLSVYL
Trigger: TAAATATACAGATAGGGATGAGGAAGCCAAGGCCCAGCAGAGCTGAGATGTGACTGCAGAGCCGTCCAACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440050.5
ENST00000478500.3
CDS CAA 90 bp GTAGAGAACCTTCTGCATCCCAGTCCGCTTAGCATCAGGCACATTTaGTGGGGTCTCCTCCTCTTTCTCTTTGAGGGAATGGTCCAGGAA +
Preference number: 6 (lower is better)
Translates to: VENLLHPSPLSIRHI*WGLLLFLFEGMVQE
Trigger: TTCCTGGACCATTCCCTCAAAGAGAAAGAGGAGGAGACCCCACAAAATGTGCCTGATGCTAAGCGGACTGGGATGCAGAAGGTTCTCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS CAA 90 bp CCTGTGTCGGGATCCCAGGGCTTCTTCATCAAGGCTGCTAAAACTTaGTCCTTCAGTCAGCAAATCCCGCTTCTCATCCTTCCATTCCTG +
Preference number: 6 (lower is better)
Translates to: PVSGSQGFFIKAAKT*SFSQQIPLLILPFL
Trigger: CAGGAATGGAAGGATGAGAAGCGGGATTTGCTGACTGAAGGACAAAGTTTTAGCAGCCTTGATGAAGAAGCCCTGGGATCCCGACACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS CAA 72 bp CTTCTGCATCCCAGTCCGCTTAGCATCAGGCACATTTaGTGGGGTCTCCTCCTCTTTCTCTTTGAGGGAATG +
Preference number: 6 (lower is better)
Translates to: LLHPSPLSIRHI*WGLLLFLFEGM
Trigger: CATTCCCTCAAAGAGAAAGAGGAGGAGACCCCACAAAATGTGCCTGATGCTAAGCGGACTGGGATGCAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS CAA 72 bp ATCTCCTGTGAAGTGGCCTTTAGGGCGGCGATTGAATaGCACCGTTTCTTAGACGGTGAAGCCTTCAAAGCT +
Preference number: 6 (lower is better)
Translates to: ISCEVAFRAAIE*HRFLDGEAFKA
Trigger: AGCTTTGAAGGCTTCACCGTCTAAGAAACGGTGCAATTCAATCGCCGCCCTAAAGGCCACTTCACAGGAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS CAA 90 bp CCCAGAACTAGAACCCAGGTCACTGGGGGCATGCTTAACAGTCCTTaGTGTATTGCAGTTTCCATGATGTGTCCTCATTGCTATCAGAAC +
Preference number: 6 (lower is better)
Translates to: PRTRTQVTGGMLNSP*CIAVSMMCPHCYQN
Trigger: GTTCTGATAGCAATGAGGACACATCATGGAAACTGCAATACACAAAGGACTGTTAAGCATGCCCCCAGTGACCTGGGTTCTAGTTCTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474356.1
CDS CAA 90 bp ACATCTTCACTGATTAGCAAAACACTCTCAGCTTTAAGCCTCTTCTaGAAATACTGCCTCTTCATGAGACACAGGGCAGGAGGTTCTCGT +
Preference number: 6 (lower is better)
Translates to: TSSLISKTLSALSLF*KYCLFMRHRAGGSR
Trigger: ACGAGAACCTCCTGCCCTGTGTCTCATGAAGAGGCAGTATTTCAAGAAGAGGCTTAAAGCTGAGAGTGTTTTGCTAATCAGTGAAGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472907.6
CDS TCA 72 bp ATGATCTTGAAGCTTTCTAGCACCCGGCAGTCTCTCTaGAGTGTTTTCATAAGCGCGTTGTATGTTTCCGTA +
Preference number: 6 (lower is better)
Translates to: MILKLSSTRQSL*SVFISALYVSV
Trigger: TACGGAAACATACAACGCGCTTATGAAAACACTTCAGAGAGACTGCCGGGTGCTAGAAAGCTTCAAGATCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS TCA 72 bp GCTAGCAACGTAATCATCTCTGTGTTGGTCCATGCTTaGATGAATGTACACGGAATCTTGGGTAAACGAGAC +
Preference number: 6 (lower is better)
Translates to: ASNVIISVLVHA*MNVHGILGKRD
Trigger: GTCTCGTTTACCCAAGATTCCGTGTACATTCATTCAAGCATGGACCAACACAGAGATGATTACGTTGCTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478500.3
CDS TCA 72 bp GAAGTGAGATTACCCACTGTGTATCCTATTCCCAGCTaGATAGCACCTTTAATAGCAGATGATGCAGTCTTT +
Preference number: 6 (lower is better)
Translates to: EVRLPTVYPIPS*IAPLIADDAVF
Trigger: AAAGACTGCATCATCTGCTATTAAAGGTGCTATTCAGCTGGGAATAGGATACACAGTGGGTAATCTCACTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265382.8
ENST00000377284.5
ENST00000437200.5
ENST00000440050.5
ENST00000541509.5
CDS TCA 72 bp GAAGTGAGATTACCCACTGTGTATCCTATTCCCAGCTaGATAGCACCTTTAATAGCAGATGATGCAGTTGAA +
Preference number: 6 (lower is better)
Translates to: EVRLPTVYPIPS*IAPLIADDAVE
Trigger: TTCAACTGCATCATCTGCTATTAAAGGTGCTATTCAGCTGGGAATAGGATACACAGTGGGTAATCTCACTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478500.3
CDS CCA 72 bp CACCACATAAAAGTCTTGCATAAGAACATCTCGTTCTaGCTTGGAAGTGAGATTACCCACTGTGTATCCTAT +
Preference number: 6 (lower is better)
Translates to: HHIKVLHKNISF*LGSEITHCVSY
Trigger: ATAGGATACACAGTGGGTAATCTCACTTCCAAGCCAGAACGAGATGTTCTTATGCAAGACTTTTATGTGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265382.8
ENST00000377284.5
ENST00000437200.5
ENST00000440050.5
ENST00000478500.3
ENST00000541509.5
CDS TCA 72 bp GCATGCTTAACAGTCCTTTGTGTATTGCAGTTTCCATaGTGTGTCCTCATTGCTATCAGAACTGAAATGATG +
Preference number: 6 (lower is better)
Translates to: ACLTVLCVLQFP*CVLIAIRTEMM
Trigger: CATCATTTCAGTTCTGATAGCAATGAGGACACATCATGGAAACTGCAATACACAAAGGACTGTTAAGCATGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474356.1
CDS TCA 72 bp TTTTGTTTTATATGTGAGACACTTGAGACTTGGAAGTaGTATGATGGCCCAGGTCATACGGCCAAATGTAGT +
Preference number: 6 (lower is better)
Translates to: FCFICETLETWK*YDGPGHTAKCS
Trigger: ACTACATTTGGCCGTATGACCTGGGCCATCATATCACTTCCAAGTCTCAAGTGTCTCACATATAAAACAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474356.1
CDS TCA 72 bp CCACGCAATGATAGCCTTATTTCACAGACAGCATACTaGAGACACAGCTCAAGATTTCTAAAATCTTTCACC +
Preference number: 6 (lower is better)
Translates to: PRNDSLISQTAY*RHSSRFLKSFT
Trigger: GGTGAAAGATTTTAGAAATCTTGAGCTGTGTCTTCAGTATGCTGTCTGTGAAATAAGGCTATCATTGCGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472907.6
CDS CAA 72 bp TGCCTCCTGATTGCATACAATACAGTCCGTAAAATTTaGGCAAAAGAGTCCTTGGATTCTGGTTTAAATTCA +
Preference number: 6 (lower is better)
Translates to: CLLIAYNTVRKI*AKESLDSGLNS
Trigger: TGAATTTAAACCAGAATCCAAGGACTCTTTTGCCAAAATTTTACGGACTGTATTGTATGCAATCAGGAGGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265382.8
ENST00000478500.3
ENST00000541509.5
CDS CAA 72 bp ATTTCATACAAACGTTTTGTTTTATATGTGAGACACTaGAGACTTGGAAGTGATATGATGGCCCAGGTCATA +
Preference number: 6 (lower is better)
Translates to: ISYKRFVLYVRH*RLGSDMMAQVI
Trigger: TATGACCTGGGCCATCATATCACTTCCAAGTCTCAAGTGTCTCACATATAAAACAAAACGTTTGTATGAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474356.1