RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PIGR (Homo sapiens)

Ensembl gene IDs: ENSG00000162896

Ensembl transcript IDs: ENST00000356495.5, ENST00000487208.1, ENST00000491503.1

Found 262 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGGGGCGCTGCACGTCTCTCCTTTCTGCAATCAGCTCTCCCACCCTaGTCCCTCTTCCTTCAAGGGACCCATGAGGACCTCTATTCTTCT +
Preference number: 1 (lower is better)
Translates to: RGAARLSFLQSALPP*SLFLQGTHEDLYSS
Trigger: AGAAGAATAGAGGTCCTCATGGGTCCCTTGAAGGAAGAGGGACCAGGGTGGGAGAGCTGATTGCAGAAAGGAGAGACGTGCAGCGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356495.5
3UTR GCA 90 bp GGAAAAATTCTGTTGACATCCCATGATAAGGGTGCAGAGGGGCGCTaGACGTCTCTCCTTTCTGCAATCAGCTCTCCCACCCTGGTCCCT +
Preference number: 1 (lower is better)
Translates to: GKILLTSHDKGAEGR*TSLLSAISSPTLVP
Trigger: AGGGACCAGGGTGGGAGAGCTGATTGCAGAAAGGAGAGACGTGCAGCGCCCCTCTGCACCCTTATCATGGGATGTCAACAGAATTTTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356495.5
3UTR TCA 90 bp GCAATCAGCTCTCCCACCCTGGTCCCTCTTCCTTCAAGGGACCCATaGGGACCTCTATTCTTCTCCGTACCTGAGGTTCTCTCAACAGAA +
Preference number: 1 (lower is better)
Translates to: AISSPTLVPLPSRDP*GPLFFSVPEVLSTE
Trigger: TTCTGTTGAGAGAACCTCAGGTACGGAGAAGAATAGAGGTCCTCATGGGTCCCTTGAAGGAAGAGGGACCAGGGTGGGAGAGCTGATTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356495.5
3UTR TCA 90 bp GATCCCTGGCCCAGGACAGGAGATGCCAAATCTAATTTATCTCACTaGGGGCCTTTGAGAAAAACGCTTCAGGGCCAGGCTCAGTGGCTC +
Preference number: 1 (lower is better)
Translates to: DPWPRTGDAKSNLSH*GPLRKTLQGQAQWL
Trigger: GAGCCACTGAGCCTGGCCCTGAAGCGTTTTTCTCAAAGGCCCTCAGTGAGATAAATTAGATTTGGCATCTCCTGTCCTGGGCCAGGGATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356495.5
3UTR TCA 90 bp CAAGAAGAGCTGTGGCTTCTTTCACTGGTGTCCTCAGAAAGGCTGTaGGCAGTGTTGGTGGCATACCTGTCACAGCATCTAGCAAAGCAC +
Preference number: 1 (lower is better)
Translates to: QEELWLLSLVSSERL*AVLVAYLSQHLAKH
Trigger: GTGCTTTGCTAGATGCTGTGACAGGTATGCCACCAACACTGCTCACAGCCTTTCTGAGGACACCAGTGAAAGAAGCCACAGCTCTTCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356495.5
3UTR TCA 90 bp TCAGGGGTTGTGAGGGTTTGGCCATTCTTTTATCTTGGGTCCATGTaGGTGACAGAAATGGTGCGGCCTGGGAAAGATCTCCCTCCTTTA +
Preference number: 1 (lower is better)
Translates to: SGVVRVWPFFYLGSM*VTEMVRPGKDLPPL
Trigger: TAAAGGAGGGAGATCTTTCCCAGGCCGCACCATTTCTGTCACTCACATGGACCCAAGATAAAAGAATGGCCAAACCCTCACAACCCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356495.5
3UTR TCA 90 bp TCTTCCTTCAAGGGACCCATGAGGACCTCTATTCTTCTCCGTACCTaGGGTTCTCTCAACAGAAAGAAGTTGCAAGTGGGACCTCCTCAT +
Preference number: 1 (lower is better)
Translates to: SSFKGPMRTSILLRT*GSLNRKKLQVGPPH
Trigger: ATGAGGAGGTCCCACTTGCAACTTCTTTCTGTTGAGAGAACCTCAGGTACGGAGAAGAATAGAGGTCCTCATGGGTCCCTTGAAGGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356495.5
3UTR CCA 90 bp TTCTTCTCCGTACCTGAGGTTCTCTCAACAGAAAGAAGTTGCAAGTaGGACCTCCTCATGCCACCCTCATCCCCAATAGGAACAATTAGG +
Preference number: 1 (lower is better)
Translates to: FFSVPEVLSTERSCK*DLLMPPSSPIGTIR
Trigger: CCTAATTGTTCCTATTGGGGATGAGGGTGGCATGAGGAGGTCCCACTTGCAACTTCTTTCTGTTGAGAGAACCTCAGGTACGGAGAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356495.5
3UTR CCA 90 bp CTCAGTGAGTATAAATACGCCAAGAAGAGCTGTGGCTTCTTTCACTaGTGTCCTCAGAAAGGCTGTGAGCAGTGTTGGTGGCATACCTGT +
Preference number: 1 (lower is better)
Translates to: LSEYKYAKKSCGFFH*CPQKGCEQCWWHTC
Trigger: ACAGGTATGCCACCAACACTGCTCACAGCCTTTCTGAGGACACCAGTGAAAGAAGCCACAGCTCTTCTTGGCGTATTTATACTCACTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356495.5
3UTR CCA 90 bp ATTCTTTTATCTTGGGTCCATGTGAGTGACAGAAATGGTGCGGCCTaGGAAAGATCTCCCTCCTTTACATTTTCTCTTCTCCCTCCTCCT +
Preference number: 1 (lower is better)
Translates to: ILLSWVHVSDRNGAA*ERSPSFTFSLLPPP
Trigger: AGGAGGAGGGAGAAGAGAAAATGTAAAGGAGGGAGATCTTTCCCAGGCCGCACCATTTCTGTCACTCACATGGACCCAAGATAAAAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356495.5
3UTR-3UTR GCA 90 bp GGTGTCCTCAGAAAGGCTGTGAGCAGTGTTGGTGGCATACCTGTCACAGCATCTGGTGATTGTCATGGGTaGAGGGAGCAGGCGGCGACA +
Preference number: 2 (lower is better)
Translates to: GVLRKAVSSVGGIPVTASGDCHG*REQAAT
Trigger: TGTCGCCGCCTGCTCCCTGCACCCATGACAATCACC...AGATGCTGTGACAGGTATGCCACCAACACTGCTCACAGCCTTTCTGAGGACACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356495.5
3UTR-3UTR TCA 90 bp TGGGTCCATGTGAGTGACAGAAATGGTGCGGCCTGGGAAAGATCTCCCTCCTTTAGGCAGAGGTTTCAGTaGGCCGAGATTGTGTCACTG +
Preference number: 2 (lower is better)
Translates to: WVHVSDRNGAAWERSPSFRQRFQ*AEIVSL
Trigger: CAGTGACACAATCTCGGCTCACTGAAACCTCTGCCT...AAAGGAGGGAGATCTTTCCCAGGCCGCACCATTTCTGTCACTCACATGGACCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356495.5
3UTR-3UTR TCA 90 bp GACAGAAATGGTGCGGCCTGGGAAAGATCTCCCTCCTTTACATTTTCTCTTCTCCCTTCAAGGGACCCATaGGGACCTCTATTCTTCTCC +
Preference number: 2 (lower is better)
Translates to: DRNGAAWERSPSFTFSLLPSRDP*GPLFFS
Trigger: GGAGAAGAATAGAGGTCCTCATGGGTCCCTTGAAGG...GAGAAGAGAAAATGTAAAGGAGGGAGATCTTTCCCAGGCCGCACCATTTCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356495.5
3UTR-3UTR CCA 90 bp ACAGAAATGGTGCGGCCTGGGAAAGATCTCCCTCCTTTACATTTTCTCTTCTCCGACGGGAGGGAGGGATaGAGTGGAGGGAAAAATTCT +
Preference number: 2 (lower is better)
Translates to: TEMVRPGKDLPPLHFLFSDGREG*SGGKNS
Trigger: AGAATTTTTCCCTCCACTCCATCCCTCCCTCCCGTC...GGAGAAGAGAAAATGTAAAGGAGGGAGATCTTTCCCAGGCCGCACCATTTCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356495.5
3UTR-3UTR TCA 90 bp ACAGAAATGGTGCGGCCTGGGAAAGATCTCCCTCCTTTACATTTTCTCTTCTCCGGCATGAGAATAGCTTaGACCTGGAAGGCAGAGGTT +
Preference number: 2 (lower is better)
Translates to: TEMVRPGKDLPPLHFLFSGMRIA*TWKAEV
Trigger: AACCTCTGCCTTCCAGGTTCAAGCTATTCTCATGCC...GGAGAAGAGAAAATGTAAAGGAGGGAGATCTTTCCCAGGCCGCACCATTTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356495.5
3UTR-3UTR GCA 90 bp ACAGAAATGGTGCGGCCTGGGAAAGATCTCCCTCCTTTACATTTTCTCTTCTCCCTTATTCTAAAACTGTaGCTCCAACAGAGGGGCAGG +
Preference number: 2 (lower is better)
Translates to: TEMVRPGKDLPPLHFLFSLILKL*LQQRGR
Trigger: CCTGCCCCTCTGTTGGAGGCACAGTTTTAGAATAAG...GGAGAAGAGAAAATGTAAAGGAGGGAGATCTTTCCCAGGCCGCACCATTTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356495.5
3UTR CAA 90 bp TTCCCTTCAACTTGGAACTCTTCAAACATCAGGGGTTGTGAGGGTTaGGCCATTCTTTTATCTTGGGTCCATGTGAGTGACAGAAATGGT +
Preference number: 2 (lower is better)
Translates to: FPSTWNSSNIRGCEG*AILLSWVHVSDRNG
Trigger: ACCATTTCTGTCACTCACATGGACCCAAGATAAAAGAATGGCCAAACCCTCACAACCCCTGATGTTTGAAGAGTTCCAAGTTGAAGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356495.5
3UTR-3UTR CAA 90 bp TGGGTCCATGTGAGTGACAGAAATGGTGCGGCCTGGGAAAGATCTCCCTCCTTTGAGGCGGCAGATCACTaGAGGCCAGGAGTTCGAGAC +
Preference number: 3 (lower is better)
Translates to: WVHVSDRNGAAWERSPSFEAADH*RPGVRD
Trigger: GTCTCGAACTCCTGGCCTCAAGTGATCTGCCGCCTC...AAAGGAGGGAGATCTTTCCCAGGCCGCACCATTTCTGTCACTCACATGGACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356495.5
3UTR GCA 72 bp CTGTTGACATCCCATGATAAGGGTGCAGAGGGGCGCTaGACGTCTCTCCTTTCTGCAATCAGCTCTCCCACC +
Preference number: 3 (lower is better)
Translates to: LLTSHDKGAEGR*TSLLSAISSPT
Trigger: GGTGGGAGAGCTGATTGCAGAAAGGAGAGACGTGCAGCGCCCCTCTGCACCCTTATCATGGGATGTCAACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356495.5
3UTR TCA 72 bp TCCCAGTACTTTGAGAAGCTGAGGCGGCAGATCACTTaGGGCCAGGAGTTCGAGACCAGTCTCGTCAACATG +
Preference number: 3 (lower is better)
Translates to: SQYFEKLRRQIT*GQEFETSLVNM
Trigger: CATGTTGACGAGACTGGTCTCGAACTCCTGGCCTCAAGTGATCTGCCGCCTCAGCTTCTCAAAGTACTGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356495.5
3UTR TCA 72 bp CTGTGGCTTCTTTCACTGGTGTCCTCAGAAAGGCTGTaGGCAGTGTTGGTGGCATACCTGTCACAGCATCTA +
Preference number: 3 (lower is better)
Translates to: LWLLSLVSSERL*AVLVAYLSQHL
Trigger: TAGATGCTGTGACAGGTATGCCACCAACACTGCTCACAGCCTTTCTGAGGACACCAGTGAAAGAAGCCACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356495.5
3UTR TCA 72 bp CCCAGGACAGGAGATGCCAAATCTAATTTATCTCACTaGGGGCCTTTGAGAAAAACGCTTCAGGGCCAGGCT +
Preference number: 3 (lower is better)
Translates to: PRTGDAKSNLSH*GPLRKTLQGQA
Trigger: AGCCTGGCCCTGAAGCGTTTTTCTCAAAGGCCCTCAGTGAGATAAATTAGATTTGGCATCTCCTGTCCTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356495.5
3UTR-3UTR CAA 90 bp GGGAGGGATGGAGTGGAGGGAAAAATTCTGTTGACATCCCATGATAAGGGTGCACTCAACAGAAAGAAGTaGCAAGTGGGACCTCCTCAT +
Preference number: 3 (lower is better)
Translates to: GRDGVEGKILLTSHDKGALNRKK*QVGPPH
Trigger: ATGAGGAGGTCCCACTTGCAACTTCTTTCTGTTGAG...TGCACCCTTATCATGGGATGTCAACAGAATTTTTCCCTCCACTCCATCCCTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356495.5
3UTR-3UTR CAA 90 bp GACAGAAATGGTGCGGCCTGGGAAAGATCTCCCTCCTTTACATTTTCTCTTCTCTTCAGTGAGCCGAGATaGTGTCACTGCATTCCAGTC +
Preference number: 3 (lower is better)
Translates to: DRNGAAWERSPSFTFSLLFSEPR*CHCIPV
Trigger: GACTGGAATGCAGTGACACAATCTCGGCTCACTGAA...GAGAAGAGAAAATGTAAAGGAGGGAGATCTTTCCCAGGCCGCACCATTTCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356495.5
3UTR CCA 72 bp TATAAATACGCCAAGAAGAGCTGTGGCTTCTTTCACTaGTGTCCTCAGAAAGGCTGTGAGCAGTGTTGGTGG +
Preference number: 3 (lower is better)
Translates to: YKYAKKSCGFFH*CPQKGCEQCWW
Trigger: CCACCAACACTGCTCACAGCCTTTCTGAGGACACCAGTGAAAGAAGCCACAGCTCTTCTTGGCGTATTTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356495.5
3UTR CCA 72 bp TCTTGGGTCCATGTGAGTGACAGAAATGGTGCGGCCTaGGAAAGATCTCCCTCCTTTACATTTTCTCTTCTC +
Preference number: 3 (lower is better)
Translates to: SWVHVSDRNGAA*ERSPSFTFSLL
Trigger: GAGAAGAGAAAATGTAAAGGAGGGAGATCTTTCCCAGGCCGCACCATTTCTGTCACTCACATGGACCCAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356495.5
3UTR-3UTR CAA 90 bp CTTTGTTTCCCTTCAACTTGGAACTCTTCAAACATCAGGGGTTGTGAGGGTTTGAGGCATGAGAATAGCTaGAACCTGGAAGGCAGAGGT +
Preference number: 3 (lower is better)
Translates to: LCFPSTWNSSNIRGCEGLRHENS*NLEGRG
Trigger: ACCTCTGCCTTCCAGGTTCAAGCTATTCTCATGCCT...CAAACCCTCACAACCCCTGATGTTTGAAGAGTTCCAAGTTGAAGGGAAACAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356495.5
3UTR-3UTR CAA 90 bp GACAGAAATGGTGCGGCCTGGGAAAGATCTCCCTCCTTTACATTTTCTCTTCTCGAGGGAAAAATTCTGTaGACATCCCATGATAAGGGT +
Preference number: 3 (lower is better)
Translates to: DRNGAAWERSPSFTFSLLEGKIL*TSHDKG
Trigger: ACCCTTATCATGGGATGTCAACAGAATTTTTCCCTC...GAGAAGAGAAAATGTAAAGGAGGGAGATCTTTCCCAGGCCGCACCATTTCTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR CCA 90 bp GGGCCCCAGGATCGACATGATTCTGAAGGTGATTGTCATGGGTGCAGGGAGCAGGGGCAGCGGCCATTCTaGGCCCCTTCCCAGAGACAC +
Preference number: 4 (lower is better)
Translates to: GPQDRHDSEGDCHGCREQGQRPF*APSQRH
Trigger: GTGTCTCTGGGAAGGGGCCCAGAATGGCCGCTGCCC...CTGCTCCCTGCACCCATGACAATCACCTTCAGAATCATGTCGATCCTGGGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR TCA 90 bp ATAGGAACAATTAGGCCAGGCTTTGATGTCACTGAGGAGGGGACCAGCACGCCTCTGCCTTCGCTAGGCTaGCATCGCGGGACCCCGCTG +
Preference number: 4 (lower is better)
Translates to: IGTIRPGFDVTEEGTSTPLPSLG*HRGTPL
Trigger: CAGCGGGGTCCCGCGATGTCAGCCTAGCGAAGGCAG...AGGCGTGCTGGTCCCCTCCTCAGTGACATCAAAGCCTGGCCTAATTGTTCCTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR GCA 90 bp GGGCCCCAGGATCGACATGATTCTGAAGGTGATTGTCATGGGTGCAGGGAGCAGCACGAAGAGCAGCATTaGTGGTGGGTCCCGAGCGCC +
Preference number: 4 (lower is better)
Translates to: GPQDRHDSEGDCHGCREQHEEQH*WWVPSA
Trigger: GGCGCTCGGGACCCACCAGCAATGCTGCTCTTCGTG...CTGCTCCCTGCACCCATGACAATCACCTTCAGAATCATGTCGATCCTGGGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR CCA 90 bp GGAGCTGAGGGCCCCAGGATCGACATGATTCTGAAGGTGATTGTCATGGGTGCAGGGCCCAGGGCACAGTaGAAGGTCACTGAGCCCCTC +
Preference number: 4 (lower is better)
Translates to: GAEGPRIDMILKVIVMGAGPRAQ*KVTEPL
Trigger: GAGGGGCTCAGTGACCTTCCACTGTGCCCTGGGCCC...TGCACCCATGACAATCACCTTCAGAATCATGTCGATCCTGGGGCCCTCAGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR CCA 90 bp TGGGTCCATGTGAGTGACAGAAATGGTGCGGCCTGGGAAAGATCTCCCTCCTTTCCAGGGGCACCAGGGTaGAGACCAGCGCTCTGGAGC +
Preference number: 4 (lower is better)
Translates to: WVHVSDRNGAAWERSPSFPGAPG*RPALWS
Trigger: GCTCCAGAGCGCTGGTCTCCACCCTGGTGCCCCTGG...AAAGGAGGGAGATCTTTCCCAGGCCGCACCATTTCTGTCACTCACATGGACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR TCA 90 bp ATTAGGCCAGGCTTTGATGTCACTGAGGAGGGGACCAGCACGCCTCTGAGGACACCGAGGGATGTCTCCTaGGTGATCGAAGAGGCTCCC +
Preference number: 4 (lower is better)
Translates to: IRPGFDVTEEGTSTPLRTPRDVS*VIEEAP
Trigger: GGGAGCCTCTTCGATCACTCAGGAGACATCCCTCGG...TGTCCTCAGAGGCGTGCTGGTCCCCTCCTCAGTGACATCAAAGCCTGGCCTAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR GCA 90 bp GGGCCCCAGGATCGACATGATTCTGAAGGTGATTGTCATGGGTGCAGGGAGCAGGGTGATTGTCATGGGTaGAGGGAGCAGGCGGCGACA +
Preference number: 4 (lower is better)
Translates to: GPQDRHDSEGDCHGCREQGDCHG*REQAAT
Trigger: TGTCGCCGCCTGCTCCCTGCACCCATGACAATCACC...CTGCTCCCTGCACCCATGACAATCACCTTCAGAATCATGTCGATCCTGGGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR CCA 90 bp GGAGCTGAGGGCCCCAGGATCGACATGATTCTGAAGGTGATTGTCATGGGTGCATGGCTGGGCAGGGCCTaGCAGCCCGTGTTATTCCAC +
Preference number: 4 (lower is better)
Translates to: GAEGPRIDMILKVIVMGAWLGRA*QPVLFH
Trigger: GTGGAATAACACGGGCTGCCAGGCCCTGCCCAGCCA...TGCACCCATGACAATCACCTTCAGAATCATGTCGATCCTGGGGCCCTCAGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR TCA 90 bp GGAGCTGAGGGCCCCAGGATCGACATGATTCTGAAGGTGATTGTCATGGGTGCAGAGCCTTCCTGCAGCTaGCCATCCGAATGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: GAEGPRIDMILKVIVMGAEPSCS*PSEWAP
Trigger: TGGAGCCCATTCGGATGGTCAGCTGCAGGAAGGCTC...TGCACCCATGACAATCACCTTCAGAATCATGTCGATCCTGGGGCCCTCAGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR GCA 90 bp TGCAAGTGGGACCTCCTCATGCCACCCTCATCCCCAATAGGAACAATTAGGCCACCACCTCTAGCTCCCTaGCGGCACCAGTACTTCCGG +
Preference number: 4 (lower is better)
Translates to: CKWDLLMPPSSPIGTIRPPPLAP*RHQYFR
Trigger: CCGGAAGTACTGGTGCCGGCAGGGAGCTAGAGGTGG...TGGCCTAATTGTTCCTATTGGGGATGAGGGTGGCATGAGGAGGTCCCACTTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR GCA 90 bp TGGGTCCATGTGAGTGACAGAAATGGTGCGGCCTGGGAAAGATCTCCCTCCTTTGGCCACAGAGCCTCCTaGCACCCCCTTCACCACAGT +
Preference number: 4 (lower is better)
Translates to: WVHVSDRNGAAWERSPSFGHRAS*HPLHHS
Trigger: ACTGTGGTGAAGGGGGTGGCAGGAGGCTCTGTGGCC...AAAGGAGGGAGATCTTTCCCAGGCCGCACCATTTCTGTCACTCACATGGACCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR CCA 90 bp TGGGTCCATGTGAGTGACAGAAATGGTGCGGCCTGGGAAAGATCTCCCTCCTTTGAAGAGCAGCATTGCTaGTGGGTCCCGAGCGCCGCA +
Preference number: 4 (lower is better)
Translates to: WVHVSDRNGAAWERSPSFEEQHC*WVPSAA
Trigger: TGCGGCGCTCGGGACCCACCAGCAATGCTGCTCTTC...AAAGGAGGGAGATCTTTCCCAGGCCGCACCATTTCTGTCACTCACATGGACCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR CCA 90 bp GACAGAAATGGTGCGGCCTGGGAAAGATCTCCCTCCTTTACATTTTCTCTTCTCGGCCTTCGTCTTGGCTaGGCAGGGCCTGGCAGCCCG +
Preference number: 4 (lower is better)
Translates to: DRNGAAWERSPSFTFSLLGLRLG*AGPGSP
Trigger: CGGGCTGCCAGGCCCTGCCCAGCCAAGACGAAGGCC...GAGAAGAGAAAATGTAAAGGAGGGAGATCTTTCCCAGGCCGCACCATTTCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR CCA 90 bp GGGCCCCAGGATCGACATGATTCTGAAGGTGATTGTCATGGGTGCAGGGAGCAGAGCCCTCATCAGCCCTaGTCACCAGGTTCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: GPQDRHDSEGDCHGCREQSPHQP*SPGSGS
Trigger: TGACCCTGAACCTGGTGACCAGGGCTGATGAGGGCT...CTGCTCCCTGCACCCATGACAATCACCTTCAGAATCATGTCGATCCTGGGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR TCA 90 bp GGGCCCCAGGATCGACATGATTCTGAAGGTGATTGTCATGGGTGCAGGGAGCAGGATCACCACACTGAATaGGCCATCCTTGTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: GPQDRHDSEGDCHGCREQDHHTE*AILVLG
Trigger: CCCCAGGACAAGGATGGCTCATTCAGTGTGGTGATC...CTGCTCCCTGCACCCATGACAATCACCTTCAGAATCATGTCGATCCTGGGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR TCA 90 bp ATAGGAACAATTAGGCCAGGCTTTGATGTCACTGAGGAGGGGACCAGCACGCCTAGGCGGCAGATCACTTaGGGCCAGGAGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: IGTIRPGFDVTEEGTSTPRRQIT*GQEFET
Trigger: GGTCTCGAACTCCTGGCCTCAAGTGATCTGCCGCCT...AGGCGTGCTGGTCCCCTCCTCAGTGACATCAAAGCCTGGCCTAATTGTTCCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR GCA 90 bp TGCAAGTGGGACCTCCTCATGCCACCCTCATCCCCAATAGGAACAATTAGGCCAGCCTGGCAGAGATACTaGCCAGCATCGCTGAGCCTG +
Preference number: 4 (lower is better)
Translates to: CKWDLLMPPSSPIGTIRPAWQRY*PASLSL
Trigger: CAGGCTCAGCGATGCTGGGCAGTATCTCTGCCAGGC...TGGCCTAATTGTTCCTATTGGGGATGAGGGTGGCATGAGGAGGTCCCACTTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR GCA 90 bp GGAGCTGAGGGCCCCAGGATCGACATGATTCTGAAGGTGATTGTCATGGGTGCAAGTTCACGAAGGCCTTaGTGGGGCCTTCGTCTTGGC +
Preference number: 4 (lower is better)
Translates to: GAEGPRIDMILKVIVMGASSRRP*WGLRLG
Trigger: GCCAAGACGAAGGCCCCAGCAAGGCCTTCGTGAACT...TGCACCCATGACAATCACCTTCAGAATCATGTCGATCCTGGGGCCCTCAGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR GCA 90 bp TGCAAGTGGGACCTCCTCATGCCACCCTCATCCCCAATAGGAACAATTAGGCCAGGTGCAGAGGGGCGCTaGACGTCTCTCCTTTCTGCA +
Preference number: 4 (lower is better)
Translates to: CKWDLLMPPSSPIGTIRPGAEGR*TSLLSA
Trigger: TGCAGAAAGGAGAGACGTGCAGCGCCCCTCTGCACC...TGGCCTAATTGTTCCTATTGGGGATGAGGGTGGCATGAGGAGGTCCCACTTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR CCA 90 bp TGCAAGTGGGACCTCCTCATGCCACCCTCATCCCCAATAGGAACAATTAGGCCAAGGGACACAGCCTGCTaGCCAGTTGGTAACCCCTGC +
Preference number: 4 (lower is better)
Translates to: CKWDLLMPPSSPIGTIRPRDTAC*PVGNPC
Trigger: GCAGGGGTTACCAACTGGCCAGCAGGCTGTGTCCCT...TGGCCTAATTGTTCCTATTGGGGATGAGGGTGGCATGAGGAGGTCCCACTTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR CCA 90 bp ATTAGGCCAGGCTTTGATGTCACTGAGGAGGGGACCAGCACGCCTCTGAGGACAGAATCATCCCCAGCCTaGCAGAGATACTGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: IRPGFDVTEEGTSTPLRTESSPA*QRYCPA
Trigger: TGCTGGGCAGTATCTCTGCCAGGCTGGGGATGATTC...TGTCCTCAGAGGCGTGCTGGTCCCCTCCTCAGTGACATCAAAGCCTGGCCTAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR CCA 90 bp GGGAGGGATGGAGTGGAGGGAAAAATTCTGTTGACATCCCATGATAAGGGTGCACCTGCCCTCAAAGGCTaGGGCCCTCTTCCCCAGGGT +
Preference number: 4 (lower is better)
Translates to: GRDGVEGKILLTSHDKGAPALKG*GPLPQG
Trigger: ACCCTGGGGAAGAGGGCCCCAGCCTTTGAGGGCAGG...TGCACCCTTATCATGGGATGTCAACAGAATTTTTCCCTCCACTCCATCCCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR CCA 90 bp GGGAGGGATGGAGTGGAGGGAAAAATTCTGTTGACATCCCATGATAAGGGTGCAAGGCGGCCCTCGTACTaGGCCTTAACCCACCCCTCG +
Preference number: 4 (lower is better)
Translates to: GRDGVEGKILLTSHDKGARRPSY*ALTHPS
Trigger: CGAGGGGTGGGTTAAGGCCCAGTACGAGGGCCGCCT...TGCACCCTTATCATGGGATGTCAACAGAATTTTTCCCTCCACTCCATCCCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR CCA 90 bp GACAGAAATGGTGCGGCCTGGGAAAGATCTCCCTCCTTTACATTTTCTCTTCTCCTGGGGCCTTCGTCTTaGCTGGGCAGGGCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: DRNGAAWERSPSFTFSLLLGPSS*LGRAWQ
Trigger: CTGCCAGGCCCTGCCCAGCCAAGACGAAGGCCCCAG...GAGAAGAGAAAATGTAAAGGAGGGAGATCTTTCCCAGGCCGCACCATTTCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR CCA 90 bp ATAAATACGCCAAGAAGAGCTGTGGCTTCTTTCACTGGTGTCCTCAGAAAGGCTTCCTGTGCCGGGCTCTaGCCACCCCCACAGCCACGG +
Preference number: 4 (lower is better)
Translates to: INTPRRAVASFTGVLRKASCAGL*PPPQPR
Trigger: CCGTGGCTGTGGGGGTGGCCAGAGCCCGGCACAGGA...AGCCTTTCTGAGGACACCAGTGAAAGAAGCCACAGCTCTTCTTGGCGTATTTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR TCA 90 bp GGAGCTGAGGGCCCCAGGATCGACATGATTCTGAAGGTGATTGTCATGGGTGCATCTCTCCCGTTGATCTaGCTTCAGGGACACAGCCTG +
Preference number: 4 (lower is better)
Translates to: GAEGPRIDMILKVIVMGASLPLI*LQGHSL
Trigger: CAGGCTGTGTCCCTGAAGTCAGATCAACGGGAGAGA...TGCACCCATGACAATCACCTTCAGAATCATGTCGATCCTGGGGCCCTCAGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR TCA 90 bp AGGTTCTCTCAACAGAAAGAAGTTGCAAGTGGGACCTCCTCATGCCACCCTCATCCGCCAGCAGGCAGGTaGGCACGAAGAGCAGCATTG +
Preference number: 4 (lower is better)
Translates to: RFSQQKEVASGTSSCHPHPPAGR*ARRAAL
Trigger: CAATGCTGCTCTTCGTGCTCACCTGCCTGCTGGCGG...ATGAGGGTGGCATGAGGAGGTCCCACTTGCAACTTCTTTCTGTTGAGAGAACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR TCA 90 bp GGTGTCCTCAGAAAGGCTGTGAGCAGTGTTGGTGGCATACCTGTCACAGCATCTAACCACTGGAGTCGATaGCCAGCACAGGGTACAGGC +
Preference number: 4 (lower is better)
Translates to: GVLRKAVSSVGGIPVTASNHWSR*PAQGTG
Trigger: GCCTGTACCCTGTGCTGGTCATCGACTCCAGTGGTT...AGATGCTGTGACAGGTATGCCACCAACACTGCTCACAGCCTTTCTGAGGACACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR TCA 90 bp GGAGCTGAGGGCCCCAGGATCGACATGATTCTGAAGGTGATTGTCATGGGTGCACTGCTCCCATCGGCTTaGTCTCTTGTATCTGCCACC +
Preference number: 4 (lower is better)
Translates to: GAEGPRIDMILKVIVMGALLPSA*SLVSAT
Trigger: GGTGGCAGATACAAGAGATCAAGCCGATGGGAGCAG...TGCACCCATGACAATCACCTTCAGAATCATGTCGATCCTGGGGCCCTCAGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR TCA 90 bp GGAGCTGAGGGCCCCAGGATCGACATGATTCTGAAGGTGATTGTCATGGGTGCAAGCTACTTGGGAGGGTaGGGCAGGAGAATGGTGTCA +
Preference number: 4 (lower is better)
Translates to: GAEGPRIDMILKVIVMGASYLGG*GRRMVS
Trigger: TGACACCATTCTCCTGCCTCACCCTCCCAAGTAGCT...TGCACCCATGACAATCACCTTCAGAATCATGTCGATCCTGGGGCCCTCAGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR GCA 90 bp ATAGGAACAATTAGGCCAGGCTTTGATGTCACTGAGGAGGGGACCAGCACGCCTCCCTGCCTGCATATTTaGTGGAGACGTAGCCCTCCG +
Preference number: 4 (lower is better)
Translates to: IGTIRPGFDVTEEGTSTPPCLHI*WRRSPP
Trigger: CGGAGGGCTACGTCTCCAGCAAATATGCAGGCAGGG...AGGCGTGCTGGTCCCCTCCTCAGTGACATCAAAGCCTGGCCTAATTGTTCCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR GCA 90 bp GGTGTCCTCAGAAAGGCTGTGAGCAGTGTTGGTGGCATACCTGTCACAGCATCTAAATTTGGCCACGTTTaGCACCTCAGGGCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: GVLRKAVSSVGGIPVTASKFGHV*HLRAQG
Trigger: GCCCTGGGCCCTGAGGTGGCAAACGTGGCCAAATTT...AGATGCTGTGACAGGTATGCCACCAACACTGCTCACAGCCTTTCTGAGGACACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR GCA 90 bp TGCAAGTGGGACCTCCTCATGCCACCCTCATCCCCAATAGGAACAATTAGGCCAGCCGGAATCCACAGATaGTCTGCTCCCATCGGCTTG +
Preference number: 4 (lower is better)
Translates to: CKWDLLMPPSSPIGTIRPAGIHR*SAPIGL
Trigger: CAAGCCGATGGGAGCAGAGCATCTGTGGATTCCGGC...TGGCCTAATTGTTCCTATTGGGGATGAGGGTGGCATGAGGAGGTCCCACTTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR GCA 90 bp TTCTTCTCCGTACCTGAGGTTCTCTCAACAGAAAGAAGTTGCAAGTGGGACCTCCCTCGGCGGCCACGGTaGTGGACTGGAGCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: FFSVPEVLSTERSCKWDLPRRPR*WTGAGS
Trigger: ACTTCCTGCTCCAGTCCAGCACCGTGGCCGCCGAGG...GAGGTCCCACTTGCAACTTCTTTCTGTTGAGAGAACCTCAGGTACGGAGAAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR CCA 90 bp TGCAAGTGGGACCTCCTCATGCCACCCTCATCCCCAATAGGAACAATTAGGCCAAAGAGTTGCCAGGCCTaGATAGGCGAGCCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: CKWDLLMPPSSPIGTIRPKSCQA*IGEPSC
Trigger: GCAGGAAGGCTCGCCTATCCAGGCCTGGCAACTCTT...TGGCCTAATTGTTCCTATTGGGGATGAGGGTGGCATGAGGAGGTCCCACTTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR TCA 90 bp GGGAGGGATGGAGTGGAGGGAAAAATTCTGTTGACATCCCATGATAAGGGTGCAAGCCCTCCGAGGAGATaGGGGTTATGCAGCCACCTC +
Preference number: 4 (lower is better)
Translates to: GRDGVEGKILLTSHDKGASPPRR*GLCSHL
Trigger: GAGGTGGCTGCATAACCCTCATCTCCTCGGAGGGCT...TGCACCCTTATCATGGGATGTCAACAGAATTTTTCCCTCCACTCCATCCCTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR TCA 90 bp TCTCCGTACCTGAGGTTCTCTCAACAGAAAGAAGTTGCAAGTGGGACCTCCTCACCTTGTCCTGGGGGTTaGGCAGGATCCTGCCCTCAA +
Preference number: 4 (lower is better)
Translates to: SPYLRFSQQKEVASGTSSPCPGG*AGSCPQ
Trigger: TTGAGGGCAGGATCCTGCTCAACCCCCAGGACAAGG...TGAGGAGGTCCCACTTGCAACTTCTTTCTGTTGAGAGAACCTCAGGTACGGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR TCA 90 bp TGGGTCCATGTGAGTGACAGAAATGGTGCGGCCTGGGAAAGATCTCCCTCCTTTCTCACTGAGGGCCTTTaGGAAAAACGCTTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: WVHVSDRNGAAWERSPSFLTEGL*EKRFRA
Trigger: GGCCCTGAAGCGTTTTTCTCAAAGGCCCTCAGTGAG...AAAGGAGGGAGATCTTTCCCAGGCCGCACCATTTCTGTCACTCACATGGACCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR GCA 90 bp GGGCCCCAGGATCGACATGATTCTGAAGGTGATTGTCATGGGTGCAGGGAGCAGGAGGTTAGCCCTGCCTaGATATTTGCTGGAGACGTA +
Preference number: 4 (lower is better)
Translates to: GPQDRHDSEGDCHGCREQEVSPA*IFAGDV
Trigger: TACGTCTCCAGCAAATATGCAGGCAGGGCTAACCTC...CTGCTCCCTGCACCCATGACAATCACCTTCAGAATCATGTCGATCCTGGGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR GCA 90 bp GGGAGGGATGGAGTGGAGGGAAAAATTCTGTTGACATCCCATGATAAGGGTGCAATCGCGGGACCCCGCTaGCTTCCTCTCTTCAACTGC +
Preference number: 4 (lower is better)
Translates to: GRDGVEGKILLTSHDKGAIAGPR*LPLFNC
Trigger: GCAGTTGAAGAGAGGAAGGCAGCGGGGTCCCGCGAT...TGCACCCTTATCATGGGATGTCAACAGAATTTTTCCCTCCACTCCATCCCTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR CCA 90 bp TCTCCGTACCTGAGGTTCTCTCAACAGAAAGAAGTTGCAAGTGGGACCTCCTCACTCTCTAGGAGCTACTaGCAGGGCACTGGACGCTGC +
Preference number: 4 (lower is better)
Translates to: SPYLRFSQQKEVASGTSSLSRSY*QGTGRC
Trigger: GCAGCGTCCAGTGCCCTGCCAGTAGCTCCTAGAGAG...TGAGGAGGTCCCACTTGCAACTTCTTTCTGTTGAGAGAACCTCAGGTACGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR CCA 90 bp ATAAATACGCCAAGAAGAGCTGTGGCTTCTTTCACTGGTGTCCTCAGAAAGGCTGAGCAGCATTGCTGGTaGGTCCCGAGCGCCGCACCA +
Preference number: 4 (lower is better)
Translates to: INTPRRAVASFTGVLRKAEQHCW*VPSAAP
Trigger: TGGTGCGGCGCTCGGGACCCACCAGCAATGCTGCTC...AGCCTTTCTGAGGACACCAGTGAAAGAAGCCACAGCTCTTCTTGGCGTATTTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR CCA 90 bp ATAAATACGCCAAGAAGAGCTGTGGCTTCTTTCACTGGTGTCCTCAGAAAGGCTCCCCCTTCACCACAGTaGGGCTGCGGGGAATCGTGG +
Preference number: 4 (lower is better)
Translates to: INTPRRAVASFTGVLRKAPPSPQ*GCGESW
Trigger: CCACGATTCCCCGCAGCCCCACTGTGGTGAAGGGGG...AGCCTTTCTGAGGACACCAGTGAAAGAAGCCACAGCTCTTCTTGGCGTATTTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR CCA 90 bp AAATACGCCAAGAAGAGCTGTGGCTTCTTTCACTGGTGTCCTCAGAAAGGCTGTGAAGGTGCCGTTGCCTaGCTCCTCCAGCAGGGAGAG +
Preference number: 4 (lower is better)
Translates to: KYAKKSCGFFHWCPQKGCEGAVA*LLQQGE
Trigger: CTCTCCCTGCTGGAGGAGCCAGGCAACGGCACCTTC...ACAGCCTTTCTGAGGACACCAGTGAAAGAAGCCACAGCTCTTCTTGGCGTATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR CCA 90 bp GGGCCCCAGGATCGACATGATTCTGAAGGTGATTGTCATGGGTGCAGGGAGCAGAGAGCAGCCCCTCTCTaGCACCATCAAACACTTCTT +
Preference number: 4 (lower is better)
Translates to: GPQDRHDSEGDCHGCREQRAAPL*HHQTLL
Trigger: AAGAAGTGTTTGATGGTGCCAGAGAGGGGCTGCTCT...CTGCTCCCTGCACCCATGACAATCACCTTCAGAATCATGTCGATCCTGGGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR TCA 90 bp GGAGCTGAGGGCCCCAGGATCGACATGATTCTGAAGGTGATTGTCATGGGTGCATTCCTTCTCTCCCGTTaGTCTGACTTCAGGGACACA +
Preference number: 4 (lower is better)
Translates to: GAEGPRIDMILKVIVMGAFLLSR*SDFRDT
Trigger: TGTGTCCCTGAAGTCAGATCAACGGGAGAGAAGGAA...TGCACCCATGACAATCACCTTCAGAATCATGTCGATCCTGGGGCCCTCAGCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR GCA 90 bp GGTGTCCTCAGAAAGGCTGTGAGCAGTGTTGGTGGCATACCTGTCACAGCATCTTCATTGACGAAGAGTTaGCAGGCCTGGATAGGCGAG +
Preference number: 4 (lower is better)
Translates to: GVLRKAVSSVGGIPVTASSLTKS*QAWIGE
Trigger: CTCGCCTATCCAGGCCTGGCAACTCTTCGTCAATGA...AGATGCTGTGACAGGTATGCCACCAACACTGCTCACAGCCTTTCTGAGGACACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR CCA 90 bp TGGGTCCATGTGAGTGACAGAAATGGTGCGGCCTGGGAAAGATCTCCCTCCTTTATATGGGACTCTTCGTaGAGATGGCTGGGAAGACCG +
Preference number: 4 (lower is better)
Translates to: WVHVSDRNGAAWERSPSFIWDSS*RWLGRP
Trigger: CGGTCTTCCCAGCCATCTCCACGAAGAGTCCCATAT...AAAGGAGGGAGATCTTTCCCAGGCCGCACCATTTCTGTCACTCACATGGACCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR CCA 90 bp TTCTTCTCCGTACCTGAGGTTCTCTCAACAGAAAGAAGTTGCAAGTGGGACCTCCGCCCGGAGTCATCCTaGCTCAGCTGGGCAATGTTC +
Preference number: 4 (lower is better)
Translates to: FFSVPEVLSTERSCKWDLRPESS*LSWAMF
Trigger: GAACATTGCCCAGCTGAGCCAGGATGACTCCGGGCG...GAGGTCCCACTTGCAACTTCTTTCTGTTGAGAGAACCTCAGGTACGGAGAAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR CCA 90 bp ACAGAAATGGTGCGGCCTGGGAAAGATCTCCCTCCTTTACATTTTCTCTTCTCCTCACGAAGGCCTTGCTaGGGCCTTCGTCTTGGCTGG +
Preference number: 4 (lower is better)
Translates to: TEMVRPGKDLPPLHFLFSSRRPC*GLRLGW
Trigger: CCAGCCAAGACGAAGGCCCCAGCAAGGCCTTCGTGA...GGAGAAGAGAAAATGTAAAGGAGGGAGATCTTTCCCAGGCCGCACCATTTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR CCA 90 bp ATTAGGCCAGGCTTTGATGTCACTGAGGAGGGGACCAGCACGCCTCTGAGGACATGGCTCCAAATTCCCTaGAGTTCTCGAAGTCTGACA +
Preference number: 4 (lower is better)
Translates to: IRPGFDVTEEGTSTPLRTWLQIP*SSRSLT
Trigger: TGTCAGACTTCGAGAACTCCAGGGAATTTGGAGCCA...TGTCCTCAGAGGCGTGCTGGTCCCCTCCTCAGTGACATCAAAGCCTGGCCTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR CCA 90 bp ATTAGGCCAGGCTTTGATGTCACTGAGGAGGGGACCAGCACGCCTCTGAGGACACTGTGGTGCTCTCAGTaGTGGCAACAAACTCTTCTT +
Preference number: 4 (lower is better)
Translates to: IRPGFDVTEEGTSTPLRTLWCSQ*WQQTLL
Trigger: AAGAAGAGTTTGTTGCCACCACTGAGAGCACCACAG...TGTCCTCAGAGGCGTGCTGGTCCCCTCCTCAGTGACATCAAAGCCTGGCCTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR CCA 90 bp ATAGGAACAATTAGGCCAGGCTTTGATGTCACTGAGGAGGGGACCAGCACGCCTGAAAGAAGTTGCAAGTaGGACCTCCTCATGCCACCC +
Preference number: 4 (lower is better)
Translates to: IGTIRPGFDVTEEGTSTPERSCK*DLLMPP
Trigger: GGGTGGCATGAGGAGGTCCCACTTGCAACTTCTTTC...AGGCGTGCTGGTCCCCTCCTCAGTGACATCAAAGCCTGGCCTAATTGTTCCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR CCA 90 bp TGGGTCCATGTGAGTGACAGAAATGGTGCGGCCTGGGAAAGATCTCCCTCCTTTGACGGGAGGGAGGGATaGAGTGGAGGGAAAAATTCT +
Preference number: 4 (lower is better)
Translates to: WVHVSDRNGAAWERSPSFDGREG*SGGKNS
Trigger: AGAATTTTTCCCTCCACTCCATCCCTCCCTCCCGTC...AAAGGAGGGAGATCTTTCCCAGGCCGCACCATTTCTGTCACTCACATGGACCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR TCA 90 bp GGAGCTGAGGGCCCCAGGATCGACATGATTCTGAAGGTGATTGTCATGGGTGCAGCACGTGATGGACACTaGGTTACCTTCCACACTATT +
Preference number: 4 (lower is better)
Translates to: GAEGPRIDMILKVIVMGAARDGH*VTFHTI
Trigger: AATAGTGTGGAAGGTAACTCAGTGTCCATCACGTGC...TGCACCCATGACAATCACCTTCAGAATCATGTCGATCCTGGGGCCCTCAGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR TCA 90 bp GACAGAAATGGTGCGGCCTGGGAAAGATCTCCCTCCTTTACATTTTCTCTTCTCACAGGCCTCGGCTATTaGTGCCCAGGCCACACTTGT +
Preference number: 4 (lower is better)
Translates to: DRNGAAWERSPSFTFSLLTGLGY*CPGHTC
Trigger: ACAAGTGTGGCCTGGGCATCAATAGCCGAGGCCTGT...GAGAAGAGAAAATGTAAAGGAGGGAGATCTTTCCCAGGCCGCACCATTTCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR TCA 90 bp GGGAGGGATGGAGTGGAGGGAAAAATTCTGTTGACATCCCATGATAAGGGTGCATCGTGGACTCCTCATTaGCGAAGAGTTGCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: GRDGVEGKILLTSHDKGASWTPH*RRVARP
Trigger: AGGCCTGGCAACTCTTCGTCAATGAGGAGTCCACGA...TGCACCCTTATCATGGGATGTCAACAGAATTTTTCCCTCCACTCCATCCCTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR TCA 90 bp GGGCCCCAGGATCGACATGATTCTGAAGGTGATTGTCATGGGTGCAGGGAGCAGAAAAGCCTGGGATCCTaGATGGCTTTGTTCTCAATC +
Preference number: 4 (lower is better)
Translates to: GPQDRHDSEGDCHGCREQKSLGS*MALFSI
Trigger: GATTGAGAACAAAGCCATTCAGGATCCCAGGCTTTT...CTGCTCCCTGCACCCATGACAATCACCTTCAGAATCATGTCGATCCTGGGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR TCA 90 bp GGTGTCCTCAGAAAGGCTGTGAGCAGTGTTGGTGGCATACCTGTCACAGCATCTCTGTCCTGTAGCTTCTaGTTGAAACTCGGTCGACGT +
Preference number: 4 (lower is better)
Translates to: GVLRKAVSSVGGIPVTASLSCSF*LKLGRR
Trigger: ACGTCGACCGAGTTTCAATCAGAAGCTACAGGACAG...AGATGCTGTGACAGGTATGCCACCAACACTGCTCACAGCCTTTCTGAGGACACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR GCA 90 bp AAATACGCCAAGAAGAGCTGTGGCTTCTTTCACTGGTGTCCTCAGAAAGGCTGTTTCAGGGACACAGCCTaGTGGCCAGTTGGTAACCCC +
Preference number: 4 (lower is better)
Translates to: KYAKKSCGFFHWCPQKGCFRDTA*WPVGNP
Trigger: GGGGTTACCAACTGGCCAGCAGGCTGTGTCCCTGAA...ACAGCCTTTCTGAGGACACCAGTGAAAGAAGCCACAGCTCTTCTTGGCGTATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR GCA 90 bp TTCTTCTCCGTACCTGAGGTTCTCTCAACAGAAAGAAGTTGCAAGTGGGACCTCCAGTACTTCCGGGTGTaGCGGTTGACAGAGGTGGGT +
Preference number: 4 (lower is better)
Translates to: FFSVPEVLSTERSCKWDLQYFRV*RLTEVG
Trigger: ACCCACCTCTGTCAACCGGCACACCCGGAAGTACTG...GAGGTCCCACTTGCAACTTCTTTCTGTTGAGAGAACCTCAGGTACGGAGAAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR GCA 90 bp TGGGTCCATGTGAGTGACAGAAATGGTGCGGCCTGGGAAAGATCTCCCTCCTTTGGGTACAGGCCTATCTaGTTGTACAAGGACTTCCTC +
Preference number: 4 (lower is better)
Translates to: WVHVSDRNGAAWERSPSFGYRPI*LYKDFL
Trigger: GAGGAAGTCCTTGTACAAGCAGATAGGCCTGTACCC...AAAGGAGGGAGATCTTTCCCAGGCCGCACCATTTCTGTCACTCACATGGACCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR GCA 90 bp ATAAATACGCCAAGAAGAGCTGTGGCTTCTTTCACTGGTGTCCTCAGAAAGGCTTCACCACAGTGGGGCTaGGGGGAATCGTGGACTCCT +
Preference number: 4 (lower is better)
Translates to: INTPRRAVASFTGVLRKASPQWG*GESWTP
Trigger: AGGAGTCCACGATTCCCCGCAGCCCCACTGTGGTGA...AGCCTTTCTGAGGACACCAGTGAAAGAAGCCACAGCTCTTCTTGGCGTATTTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR GCA 90 bp TGGGTCCATGTGAGTGACAGAAATGGTGCGGCCTGGGAAAGATCTCCCTCCTTTCTTCCTCTCTTCAACTaGCACATAGACGGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: WVHVSDRNGAAWERSPSFLPLFN*HIDGCS
Trigger: ACTGCAGCCGTCTATGTGGCAGTTGAAGAGAGGAAG...AAAGGAGGGAGATCTTTCCCAGGCCGCACCATTTCTGTCACTCACATGGACCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR CCA 90 bp GGGAGGGATGGAGTGGAGGGAAAAATTCTGTTGACATCCCATGATAAGGGTGCATGCCTGCATATTTGCTaGAGACGTAGCCCTCCGAGG +
Preference number: 4 (lower is better)
Translates to: GRDGVEGKILLTSHDKGACLHIC*RRSPPR
Trigger: CCTCGGAGGGCTACGTCTCCAGCAAATATGCAGGCA...TGCACCCTTATCATGGGATGTCAACAGAATTTTTCCCTCCACTCCATCCCTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR CCA 90 bp AGGTTCTCTCAACAGAAAGAAGTTGCAAGTGGGACCTCCTCATGCCACCCTCATTCCCGGCTGGTGAGCTaGTTGAGGATGACAGTGAAG +
Preference number: 4 (lower is better)
Translates to: RFSQQKEVASGTSSCHPHSRLVS*LRMTVK
Trigger: CTTCACTGTCATCCTCAACCAGCTCACCAGCCGGGA...ATGAGGGTGGCATGAGGAGGTCCCACTTGCAACTTCTTTCTGTTGAGAGAACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR CCA 90 bp GGGAGGGATGGAGTGGAGGGAAAAATTCTGTTGACATCCCATGATAAGGGTGCATGGAGACCAGCGCTCTaGAGCTTCCACCTTGTTCCT +
Preference number: 4 (lower is better)
Translates to: GRDGVEGKILLTSHDKGAWRPAL*SFHLVP
Trigger: AGGAACAAGGTGGAAGCTCCAGAGCGCTGGTCTCCA...TGCACCCTTATCATGGGATGTCAACAGAATTTTTCCCTCCACTCCATCCCTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR CCA 90 bp CTTTGTTTCCCTTCAACTTGGAACTCTTCAAACATCAGGGGTTGTGAGGGTTTGCGGCGGCCACGGTGCTaGACTGGAGCAGGAAGTCTT +
Preference number: 4 (lower is better)
Translates to: LCFPSTWNSSNIRGCEGLRRPRC*TGAGSL
Trigger: AAGACTTCCTGCTCCAGTCCAGCACCGTGGCCGCCG...CAAACCCTCACAACCCCTGATGTTTGAAGAGTTCCAAGTTGAAGGGAAACAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR CCA 90 bp GGTGTCCTCAGAAAGGCTGTGAGCAGTGTTGGTGGCATACCTGTCACAGCATCTTGTGAGCAGTGTTGGTaGCATACCTGTCACAGCATC +
Preference number: 4 (lower is better)
Translates to: GVLRKAVSSVGGIPVTASCEQCW*HTCHSI
Trigger: GATGCTGTGACAGGTATGCCACCAACACTGCTCACA...AGATGCTGTGACAGGTATGCCACCAACACTGCTCACAGCCTTTCTGAGGACACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR CCA 90 bp GGGAGGGATGGAGTGGAGGGAAAAATTCTGTTGACATCCCATGATAAGGGTGCAAGAATGGTGTCAACCTaGGAGGCGGAGGTTGCAGTG +
Preference number: 4 (lower is better)
Translates to: GRDGVEGKILLTSHDKGARMVST*EAEVAV
Trigger: CACTGCAACCTCCGCCTCCCAGGTTGACACCATTCT...TGCACCCTTATCATGGGATGTCAACAGAATTTTTCCCTCCACTCCATCCCTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR TCA 90 bp ATAGGAACAATTAGGCCAGGCTTTGATGTCACTGAGGAGGGGACCAGCACGCCTGGAGTTCTCGAAGTCTaGCATGCTAATGTCTGTCCT +
Preference number: 4 (lower is better)
Translates to: IGTIRPGFDVTEEGTSTPGVLEV*HANVCP
Trigger: AGGACAGACATTAGCATGTCAGACTTCGAGAACTCC...AGGCGTGCTGGTCCCCTCCTCAGTGACATCAAAGCCTGGCCTAATTGTTCCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR TCA 90 bp TCTCCGTACCTGAGGTTCTCTCAACAGAAAGAAGTTGCAAGTGGGACCTCCTCACCTTCAAGGGACCCATaGGGACCTCTATTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: SPYLRFSQQKEVASGTSSPSRDP*GPLFFS
Trigger: GGAGAAGAATAGAGGTCCTCATGGGTCCCTTGAAGG...TGAGGAGGTCCCACTTGCAACTTCTTTCTGTTGAGAGAACCTCAGGTACGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR TCA 90 bp AGGTTCTCTCAACAGAAAGAAGTTGCAAGTGGGACCTCCTCATGCCACCCTCATTCCTCAGAAAGGCTGTaGGCAGTGTTGGTGGCATAC +
Preference number: 4 (lower is better)
Translates to: RFSQQKEVASGTSSCHPHSSERL*AVLVAY
Trigger: GTATGCCACCAACACTGCTCACAGCCTTTCTGAGGA...ATGAGGGTGGCATGAGGAGGTCCCACTTGCAACTTCTTTCTGTTGAGAGAACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR TCA 90 bp ACAGAAATGGTGCGGCCTGGGAAAGATCTCCCTCCTTTACATTTTCTCTTCTCCTTGGGTCCATGTGAGTaGCAGAAATGGTGCGGCCTG +
Preference number: 4 (lower is better)
Translates to: TEMVRPGKDLPPLHFLFSLGPCE*QKWCGL
Trigger: CAGGCCGCACCATTTCTGTCACTCACATGGACCCAA...GGAGAAGAGAAAATGTAAAGGAGGGAGATCTTTCCCAGGCCGCACCATTTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR GCA 90 bp ACAGAAATGGTGCGGCCTGGGAAAGATCTCCCTCCTTTACATTTTCTCTTCTCCCCAGTTGGTAACCCCTaGCTCTCTAGGAGCTACTGG +
Preference number: 4 (lower is better)
Translates to: TEMVRPGKDLPPLHFLFSPVGNP*LSRSYW
Trigger: CCAGTAGCTCCTAGAGAGGCAGGGGTTACCAACTGG...GGAGAAGAGAAAATGTAAAGGAGGGAGATCTTTCCCAGGCCGCACCATTTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR GCA 90 bp TGCAAGTGGGACCTCCTCATGCCACCCTCATCCCCAATAGGAACAATTAGGCCACTTATTCTAAAACTGTaGCTCCAACAGAGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: CKWDLLMPPSSPIGTIRPLILKL*LQQRGR
Trigger: CCTGCCCCTCTGTTGGAGGCACAGTTTTAGAATAAG...TGGCCTAATTGTTCCTATTGGGGATGAGGGTGGCATGAGGAGGTCCCACTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR CCA 90 bp CTTTGTTTCCCTTCAACTTGGAACTCTTCAAACATCAGGGGTTGTGAGGGTTTGCTTCGTGGAGATGGCTaGGAAGACCGCCAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: LCFPSTWNSSNIRGCEGLLRGDG*EDRQQA
Trigger: TGCCTGCTGGCGGTCTTCCCAGCCATCTCCACGAAG...CAAACCCTCACAACCCCTGATGTTTGAAGAGTTCCAAGTTGAAGGGAAACAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR CCA 90 bp GGGAGGGATGGAGTGGAGGGAAAAATTCTGTTGACATCCCATGATAAGGGTGCAGTTGACAGAGGTGGGTaGGTAGTAGCACGTGATGGA +
Preference number: 4 (lower is better)
Translates to: GRDGVEGKILLTSHDKGAVDRGG*VVARDG
Trigger: TCCATCACGTGCTACTACCCACCCACCTCTGTCAAC...TGCACCCTTATCATGGGATGTCAACAGAATTTTTCCCTCCACTCCATCCCTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR CCA 90 bp AGGTTCTCTCAACAGAAAGAAGTTGCAAGTGGGACCTCCTCATGCCACCCTCATGTCGGCACAGAAATTTaGCCACGTTTGCCACCTCAG +
Preference number: 4 (lower is better)
Translates to: RFSQQKEVASGTSSCHPHVGTEI*PRLPPQ
Trigger: CTGAGGTGGCAAACGTGGCCAAATTTCTGTGCCGAC...ATGAGGGTGGCATGAGGAGGTCCCACTTGCAACTTCTTTCTGTTGAGAGAACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR CCA 90 bp TGCAAGTGGGACCTCCTCATGCCACCCTCATCCCCAATAGGAACAATTAGGCCACGAGGAGAATTTGCATaGAAAGTGACAGGGGACCTT +
Preference number: 4 (lower is better)
Translates to: CKWDLLMPPSSPIGTIRPRGEFA*KVTGDL
Trigger: AAGGTCCCCTGTCACTTTCCATGCAAATTCTCCTCG...TGGCCTAATTGTTCCTATTGGGGATGAGGGTGGCATGAGGAGGTCCCACTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR CCA 90 bp GGTGTCCTCAGAAAGGCTGTGAGCAGTGTTGGTGGCATACCTGTCACAGCATCTTCTCGGCTTCCTCCTTaGATGACCTTTTTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: GVLRKAVSSVGGIPVTASSRLPP*MTFLPS
Trigger: AGAAGGCAAAAAGGTCATCCAAGGAGGAAGCCGAGA...AGATGCTGTGACAGGTATGCCACCAACACTGCTCACAGCCTTTCTGAGGACACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR CCA 90 bp CTTTGTTTCCCTTCAACTTGGAACTCTTCAAACATCAGGGGTTGTGAGGGTTTGGGTGAGGCAGGAGAATaGTGTCAACCTGGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: LCFPSTWNSSNIRGCEGLGEAGE*CQPGRR
Trigger: CCGCCTCCCAGGTTGACACCATTCTCCTGCCTCACC...CAAACCCTCACAACCCCTGATGTTTGAAGAGTTCCAAGTTGAAGGGAAACAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR GCA 90 bp AGGTTCTCTCAACAGAAAGAAGTTGCAAGTGGGACCTCCTCATGCCACCCTCATTGTTCACCACAAATGTaGCGTTCTCCGGGAAGTTGG +
Preference number: 4 (lower is better)
Translates to: RFSQQKEVASGTSSCHPHCSPQM*RSPGSW
Trigger: CCAACTTCCCGGAGAACGGCACATTTGTGGTGAACA...ATGAGGGTGGCATGAGGAGGTCCCACTTGCAACTTCTTTCTGTTGAGAGAACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR GCA 90 bp ACAGAAATGGTGCGGCCTGGGAAAGATCTCCCTCCTTTACATTTTCTCTTCTCCCACGTCTCTCCTTTCTaGAATCAGCTCTCCCACCCT +
Preference number: 4 (lower is better)
Translates to: TEMVRPGKDLPPLHFLFSHVSPF*NQLSHP
Trigger: AGGGTGGGAGAGCTGATTGCAGAAAGGAGAGACGTG...GGAGAAGAGAAAATGTAAAGGAGGGAGATCTTTCCCAGGCCGCACCATTTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR CCA 90 bp TTCTTCTCCGTACCTGAGGTTCTCTCAACAGAAAGAAGTTGCAAGTGGGACCTCCCTCGGGACCAAATATaGGACTCTTCGTGGAGATGG +
Preference number: 4 (lower is better)
Translates to: FFSVPEVLSTERSCKWDLPRDQI*DSSWRW
Trigger: CCATCTCCACGAAGAGTCCCATATTTGGTCCCGAGG...GAGGTCCCACTTGCAACTTCTTTCTGTTGAGAGAACCTCAGGTACGGAGAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR CCA 90 bp TGCAAGTGGGACCTCCTCATGCCACCCTCATCCCCAATAGGAACAATTAGGCCATCGGGCTTTAGCACTTaGAGGTCAGCATTCTTCTTA +
Preference number: 4 (lower is better)
Translates to: CKWDLLMPPSSPIGTIRPSGFST*RSAFFL
Trigger: TAAGAAGAATGCTGACCTCCAAGTGCTAAAGCCCGA...TGGCCTAATTGTTCCTATTGGGGATGAGGGTGGCATGAGGAGGTCCCACTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR CCA 90 bp AGGTTCTCTCAACAGAAAGAAGTTGCAAGTGGGACCTCCTCATGCCACCCTCATAGAGAGTATCGCCGTTaGTCAGACACCAGTAGAAGC +
Preference number: 4 (lower is better)
Translates to: RFSQQKEVASGTSSCHPHREYRR*SDTSRS
Trigger: GCTTCTACTGGTGTCTGACCAACGGCGATACTCTCT...ATGAGGGTGGCATGAGGAGGTCCCACTTGCAACTTCTTTCTGTTGAGAGAACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR CCA 90 bp ATTAGGCCAGGCTTTGATGTCACTGAGGAGGGGACCAGCACGCCTCTGAGGACATGGTACCTTGAGGTTTaGTTCTCCTTCGATAATCTT +
Preference number: 4 (lower is better)
Translates to: IRPGFDVTEEGTSTPLRTWYLEV*FSFDNL
Trigger: AAGATTATCGAAGGAGAACCAAACCTCAAGGTACCA...TGTCCTCAGAGGCGTGCTGGTCCCCTCCTCAGTGACATCAAAGCCTGGCCTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR CCA 90 bp TCTCCGTACCTGAGGTTCTCTCAACAGAAAGAAGTTGCAAGTGGGACCTCCTCAAGCCGTGACATTCCCTaGTACCTTGAGGTTTGGTTC +
Preference number: 4 (lower is better)
Translates to: SPYLRFSQQKEVASGTSSSRDIP*YLEVWF
Trigger: GAACCAAACCTCAAGGTACCAGGGAATGTCACGGCT...TGAGGAGGTCCCACTTGCAACTTCTTTCTGTTGAGAGAACCTCAGGTACGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR CCA 90 bp TGCAAGTGGGACCTCCTCATGCCACCCTCATCCCCAATAGGAACAATTAGGCCAACCTTTTTGCCTTCTTaGGTTCTTTGGTCTCTGTGG +
Preference number: 4 (lower is better)
Translates to: CKWDLLMPPSSPIGTIRPTFLPS*VLWSLW
Trigger: CCACAGAGACCAAAGAACCCAAGAAGGCAAAAAGGT...TGGCCTAATTGTTCCTATTGGGGATGAGGGTGGCATGAGGAGGTCCCACTTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR CCA 90 bp ATAAATACGCCAAGAAGAGCTGTGGCTTCTTTCACTGGTGTCCTCAGAAAGGCTGGCTGTGAGCAGTGTTaGTGGCATACCTGTCACAGC +
Preference number: 4 (lower is better)
Translates to: INTPRRAVASFTGVLRKAGCEQC*WHTCHS
Trigger: GCTGTGACAGGTATGCCACCAACACTGCTCACAGCC...AGCCTTTCTGAGGACACCAGTGAAAGAAGCCACAGCTCTTCTTGGCGTATTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR CCA 90 bp GACAGAAATGGTGCGGCCTGGGAAAGATCTCCCTCCTTTACATTTTCTCTTCTCCGCCAAGAAGAGCTGTaGCTTCTTTCACTGGTGTCC +
Preference number: 4 (lower is better)
Translates to: DRNGAAWERSPSFTFSLLRQEEL*LLSLVS
Trigger: GGACACCAGTGAAAGAAGCCACAGCTCTTCTTGGCG...GAGAAGAGAAAATGTAAAGGAGGGAGATCTTTCCCAGGCCGCACCATTTCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR CCA 90 bp GGGAGGGATGGAGTGGAGGGAAAAATTCTGTTGACATCCCATGATAAGGGTGCAAGAAATGGTGCGGCCTaGGAAAGATCTCCCTCCTTT +
Preference number: 4 (lower is better)
Translates to: GRDGVEGKILLTSHDKGARNGAA*ERSPSF
Trigger: AAAGGAGGGAGATCTTTCCCAGGCCGCACCATTTCT...TGCACCCTTATCATGGGATGTCAACAGAATTTTTCCCTCCACTCCATCCCTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR TCA 90 bp CTTTGTTTCCCTTCAACTTGGAACTCTTCAAACATCAGGGGTTGTGAGGGTTTGGGGATGTCTCCTGAGTaGTCGAAGAGGCTCCCATGT +
Preference number: 4 (lower is better)
Translates to: LCFPSTWNSSNIRGCEGLGMSPE*SKRLPC
Trigger: ACATGGGAGCCTCTTCGATCACTCAGGAGACATCCC...CAAACCCTCACAACCCCTGATGTTTGAAGAGTTCCAAGTTGAAGGGAAACAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR TCA 90 bp TGGGTCCATGTGAGTGACAGAAATGGTGCGGCCTGGGAAAGATCTCCCTCCTTTAGGGAAAAATTCTGTTaGCATCCCATGATAAGGGTG +
Preference number: 4 (lower is better)
Translates to: WVHVSDRNGAAWERSPSFREKFC*HPMIRV
Trigger: CACCCTTATCATGGGATGTCAACAGAATTTTTCCCT...AAAGGAGGGAGATCTTTCCCAGGCCGCACCATTTCTGTCACTCACATGGACCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR TCA 90 bp AGGTTCTCTCAACAGAAAGAAGTTGCAAGTGGGACCTCCTCATGCCACCCTCATACTCGAGACATTTTATaGCCTCTCCCAATAGGGGCA +
Preference number: 4 (lower is better)
Translates to: RFSQQKEVASGTSSCHPHTRDIL*PLPIGA
Trigger: TGCCCCTATTGGGAGAGGTCATAAAATGTCTCGAGT...ATGAGGGTGGCATGAGGAGGTCCCACTTGCAACTTCTTTCTGTTGAGAGAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR TCA 90 bp ATAAATACGCCAAGAAGAGCTGTGGCTTCTTTCACTGGTGTCCTCAGAAAGGCTAGGCAGAGGTTTCAGTaGGCCGAGATTGTGTCACTG +
Preference number: 4 (lower is better)
Translates to: INTPRRAVASFTGVLRKARQRFQ*AEIVSL
Trigger: CAGTGACACAATCTCGGCTCACTGAAACCTCTGCCT...AGCCTTTCTGAGGACACCAGTGAAAGAAGCCACAGCTCTTCTTGGCGTATTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR TCA 90 bp GACAGAAATGGTGCGGCCTGGGAAAGATCTCCCTCCTTTACATTTTCTCTTCTCTATCTTGGGTCCATGTaGGTGACAGAAATGGTGCGG +
Preference number: 4 (lower is better)
Translates to: DRNGAAWERSPSFTFSLLYLGSM*VTEMVR
Trigger: CCGCACCATTTCTGTCACTCACATGGACCCAAGATA...GAGAAGAGAAAATGTAAAGGAGGGAGATCTTTCCCAGGCCGCACCATTTCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR GCA 90 bp AGGTTCTCTCAACAGAAAGAAGTTGCAAGTGGGACCTCCTCATGCCACCCTCATCACAGTTTTCCCCACTaGTCTGTCGGCACAGAAATT +
Preference number: 4 (lower is better)
Translates to: RFSQQKEVASGTSSCHPHHSFPH*SVGTEI
Trigger: AATTTCTGTGCCGACAGAGCAGTGGGGAAAACTGTG...ATGAGGGTGGCATGAGGAGGTCCCACTTGCAACTTCTTTCTGTTGAGAGAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR GCA 90 bp ACAGAAATGGTGCGGCCTGGGAAAGATCTCCCTCCTTTACATTTTCTCTTCTCCTGCCACATAGACGGCTaGAGTCTCTCCATAGAAGTG +
Preference number: 4 (lower is better)
Translates to: TEMVRPGKDLPPLHFLFSCHIDG*SLSIEV
Trigger: CACTTCTATGGAGAGACTGCAGCCGTCTATGTGGCA...GGAGAAGAGAAAATGTAAAGGAGGGAGATCTTTCCCAGGCCGCACCATTTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR GCA 90 bp GACAGAAATGGTGCGGCCTGGGAAAGATCTCCCTCCTTTACATTTTCTCTTCTCAATCCACAGATGCTCTaGTCCCATCGGCTTGATCTC +
Preference number: 4 (lower is better)
Translates to: DRNGAAWERSPSFTFSLLNPQML*SHRLDL
Trigger: GAGATCAAGCCGATGGGAGCAGAGCATCTGTGGATT...GAGAAGAGAAAATGTAAAGGAGGGAGATCTTTCCCAGGCCGCACCATTTCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR GCA 90 bp TTCTTCTCCGTACCTGAGGTTCTCTCAACAGAAAGAAGTTGCAAGTGGGACCTCCTTTGGTCTCTGTGGTaGTCTCAGTGGTGGCAACAA +
Preference number: 4 (lower is better)
Translates to: FFSVPEVLSTERSCKWDLLWSLW*SQWWQQ
Trigger: TTGTTGCCACCACTGAGAGCACCACAGAGACCAAAG...GAGGTCCCACTTGCAACTTCTTTCTGTTGAGAGAACCTCAGGTACGGAGAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR CCA 90 bp ACAGAAATGGTGCGGCCTGGGAAAGATCTCCCTCCTTTACATTTTCTCTTCTCCTCGCTGAGCCTGAGTTaGTTGATGACAACGCTGAAC +
Preference number: 4 (lower is better)
Translates to: TEMVRPGKDLPPLHFLFSSLSLS*LMTTLN
Trigger: GTTCAGCGTTGTCATCAACCAACTCAGGCTCAGCGA...GGAGAAGAGAAAATGTAAAGGAGGGAGATCTTTCCCAGGCCGCACCATTTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR CCA 90 bp ATAGGAACAATTAGGCCAGGCTTTGATGTCACTGAGGAGGGGACCAGCACGCCTTCTTCTTATTACTATTaGAATCATCCCCAGCCTGGC +
Preference number: 4 (lower is better)
Translates to: IGTIRPGFDVTEEGTSTPSSYYY*NHPQPG
Trigger: GCCAGGCTGGGGATGATTCCAATAGTAATAAGAAGA...AGGCGTGCTGGTCCCCTCCTCAGTGACATCAAAGCCTGGCCTAATTGTTCCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR CCA 90 bp AAATACGCCAAGAAGAGCTGTGGCTTCTTTCACTGGTGTCCTCAGAAAGGCTGTGCCTGGGATCCTGAATaGCTTTGTTCTCAATCTCCC +
Preference number: 4 (lower is better)
Translates to: KYAKKSCGFFHWCPQKGCAWDPE*LCSQSP
Trigger: GGGAGATTGAGAACAAAGCCATTCAGGATCCCAGGC...ACAGCCTTTCTGAGGACACCAGTGAAAGAAGCCACAGCTCTTCTTGGCGTATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR CCA 90 bp GGGAGGGATGGAGTGGAGGGAAAAATTCTGTTGACATCCCATGATAAGGGTGCACCTCTGCAAAAAGCCTaGGATCCTGAATGGCTTTGT +
Preference number: 4 (lower is better)
Translates to: GRDGVEGKILLTSHDKGAPLQKA*DPEWLC
Trigger: ACAAAGCCATTCAGGATCCCAGGCTTTTTGCAGAGG...TGCACCCTTATCATGGGATGTCAACAGAATTTTTCCCTCCACTCCATCCCTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR CCA 90 bp AGGTTCTCTCAACAGAAAGAAGTTGCAAGTGGGACCTCCTCATGCCACCCTCATTGCCAGCTTGTAGGCTaGTTGAAGTACAGAACTCAG +
Preference number: 4 (lower is better)
Translates to: RFSQQKEVASGTSSCHPHCQLVG*LKYRTQ
Trigger: CTGAGTTCTGTACTTCAACCAGCCTACAAGCTGGCA...ATGAGGGTGGCATGAGGAGGTCCCACTTGCAACTTCTTTCTGTTGAGAGAACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR TCA 90 bp CTTTGTTTCCCTTCAACTTGGAACTCTTCAAACATCAGGGGTTGTGAGGGTTTGACAGTGGAAGGTCACTaGGCCCCTCAGGTCTTCATA +
Preference number: 4 (lower is better)
Translates to: LCFPSTWNSSNIRGCEGLTVEGH*APQVFI
Trigger: TATGAAGACCTGAGGGGCTCAGTGACCTTCCACTGT...CAAACCCTCACAACCCCTGATGTTTGAAGAGTTCCAAGTTGAAGGGAAACAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR TCA 90 bp GACAGAAATGGTGCGGCCTGGGAAAGATCTCCCTCCTTTACATTTTCTCTTCTCAATTTGCATGGAAAGTaGCAGGGGACCTTGAGAGTC +
Preference number: 4 (lower is better)
Translates to: DRNGAAWERSPSFTFSLLNLHGK*QGTLRV
Trigger: GACTCTCAAGGTCCCCTGTCACTTTCCATGCAAATT...GAGAAGAGAAAATGTAAAGGAGGGAGATCTTTCCCAGGCCGCACCATTTCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR TCA 90 bp ATAAATACGCCAAGAAGAGCTGTGGCTTCTTTCACTGGTGTCCTCAGAAAGGCTGGCATGAGAATAGCTTaGACCTGGAAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: INTPRRAVASFTGVLRKAGMRIA*TWKAEV
Trigger: AACCTCTGCCTTCCAGGTTCAAGCTATTCTCATGCC...AGCCTTTCTGAGGACACCAGTGAAAGAAGCCACAGCTCTTCTTGGCGTATTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR TCA 90 bp AGGTTCTCTCAACAGAAAGAAGTTGCAAGTGGGACCTCCTCATGCCACCCTCATAAACATCAGGGGTTGTaGGGGTTTGGCCATTCTTTT +
Preference number: 4 (lower is better)
Translates to: RFSQQKEVASGTSSCHPHKHQGL*GFGHSF
Trigger: AAAAGAATGGCCAAACCCTCACAACCCCTGATGTTT...ATGAGGGTGGCATGAGGAGGTCCCACTTGCAACTTCTTTCTGTTGAGAGAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR GCA 90 bp TCTCCGTACCTGAGGTTCTCTCAACAGAAAGAAGTTGCAAGTGGGACCTCCTCACCGTGTTATTCCACTTaGACCAGTATTTCTCGTACG +
Preference number: 4 (lower is better)
Translates to: SPYLRFSQQKEVASGTSSPCYST*TSISRT
Trigger: CGTACGAGAAATACTGGTGCAAGTGGAATAACACGG...TGAGGAGGTCCCACTTGCAACTTCTTTCTGTTGAGAGAACCTCAGGTACGGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR GCA 90 bp AAATACGCCAAGAAGAGCTGTGGCTTCTTTCACTGGTGTCCTCAGAAAGGCTGTTTGATCTCTTGTATCTaGCACCGCCTTTTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: KYAKKSCGFFHWCPQKGCLISCI*HRLFLC
Trigger: GCAGAGGAAAAGGCGGTGGCAGATACAAGAGATCAA...ACAGCCTTTCTGAGGACACCAGTGAAAGAAGCCACAGCTCTTCTTGGCGTATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR CCA 90 bp GACAGAAATGGTGCGGCCTGGGAAAGATCTCCCTCCTTTACATTTTCTCTTCTCTCATCCTGGCTCAGCTaGGCAATGTTCACCACAAAT +
Preference number: 4 (lower is better)
Translates to: DRNGAAWERSPSFTFSLLSSWLS*AMFTTN
Trigger: ATTTGTGGTGAACATTGCCCAGCTGAGCCAGGATGA...GAGAAGAGAAAATGTAAAGGAGGGAGATCTTTCCCAGGCCGCACCATTTCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR TCA 90 bp CTTTGTTTCCCTTCAACTTGGAACTCTTCAAACATCAGGGGTTGTGAGGGTTTGGTGGGTAGTAGCACGTaGTGGACACTGAGTTACCTT +
Preference number: 4 (lower is better)
Translates to: LCFPSTWNSSNIRGCEGLVGSST*WTLSYL
Trigger: AAGGTAACTCAGTGTCCATCACGTGCTACTACCCAC...CAAACCCTCACAACCCCTGATGTTTGAAGAGTTCCAAGTTGAAGGGAAACAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR TCA 90 bp GACAGAAATGGTGCGGCCTGGGAAAGATCTCCCTCCTTTACATTTTCTCTTCTCAACTGGCCAGTACCCTaGATATCAAGGCGTATTCTT +
Preference number: 4 (lower is better)
Translates to: DRNGAAWERSPSFTFSLLNWPVP*ISRRIL
Trigger: AAGAATACGCCTTGATATTCAGGGTACTGGCCAGTT...GAGAAGAGAAAATGTAAAGGAGGGAGATCTTTCCCAGGCCGCACCATTTCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR TCA 90 bp CTTTGTTTCCCTTCAACTTGGAACTCTTCAAACATCAGGGGTTGTGAGGGTTTGCATTCCCTGGTACCTTaGGGTTTGGTTCTCCTTCGA +
Preference number: 4 (lower is better)
Translates to: LCFPSTWNSSNIRGCEGLHSLVP*GLVLLR
Trigger: TCGAAGGAGAACCAAACCTCAAGGTACCAGGGAATG...CAAACCCTCACAACCCCTGATGTTTGAAGAGTTCCAAGTTGAAGGGAAACAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR TCA 90 bp ATAAATACGCCAAGAAGAGCTGTGGCTTCTTTCACTGGTGTCCTCAGAAAGGCTCCTGTAGCTTCTGATTaGAACTCGGTCGACGTTCTT +
Preference number: 4 (lower is better)
Translates to: INTPRRAVASFTGVLRKAPVASD*NSVDVL
Trigger: AAGAACGTCGACCGAGTTTCAATCAGAAGCTACAGG...AGCCTTTCTGAGGACACCAGTGAAAGAAGCCACAGCTCTTCTTGGCGTATTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR TCA 90 bp AAATACGCCAAGAAGAGCTGTGGCTTCTTTCACTGGTGTCCTCAGAAAGGCTGTATTCTTCTCCGTACCTaGGGTTCTCTCAACAGAAAG +
Preference number: 4 (lower is better)
Translates to: KYAKKSCGFFHWCPQKGCILLRT*GSLNRK
Trigger: CTTTCTGTTGAGAGAACCTCAGGTACGGAGAAGAAT...ACAGCCTTTCTGAGGACACCAGTGAAAGAAGCCACAGCTCTTCTTGGCGTATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR CCA 90 bp TTCTTCTCCGTACCTGAGGTTCTCTCAACAGAAAGAAGTTGCAAGTGGGACCTCAAAATTAGCCAGACATaGTGGCCCACATCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: FFSVPEVLSTERSCKWDLKISQT*WPTSVV
Trigger: GACTACAGATGTGGGCCACCATGTCTGGCTAATTTT...GAGGTCCCACTTGCAACTTCTTTCTGTTGAGAGAACCTCAGGTACGGAGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR GCA 90 bp AGGTTCTCTCAACAGAAAGAAGTTGCAAGTGGGACCTCCTCATGCCACCCTCATAATTACCTGTGTGTATaGTCATCATACATGACCCCT +
Preference number: 4 (lower is better)
Translates to: RFSQQKEVASGTSSCHPHNYLCV*SSYMTP
Trigger: AGGGGTCATGTATGATGAGCATACACACAGGTAATT...ATGAGGGTGGCATGAGGAGGTCCCACTTGCAACTTCTTTCTGTTGAGAGAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR CCA 90 bp CTTTGTTTCCCTTCAACTTGGAACTCTTCAAACATCAGGGGTTGTGAGGGTTTGCTCCCATGTTGTCATTaGCTCCAAATTCCCTGGAGT +
Preference number: 4 (lower is better)
Translates to: LCFPSTWNSSNIRGCEGLLPCCH*LQIPWS
Trigger: ACTCCAGGGAATTTGGAGCCAATGACAACATGGGAG...CAAACCCTCACAACCCCTGATGTTTGAAGAGTTCCAAGTTGAAGGGAAACAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356495.5
3UTR CAA 72 bp ACTTGGAACTCTTCAAACATCAGGGGTTGTGAGGGTTaGGCCATTCTTTTATCTTGGGTCCATGTGAGTGAC +
Preference number: 4 (lower is better)
Translates to: TWNSSNIRGCEG*AILLSWVHVSD
Trigger: GTCACTCACATGGACCCAAGATAAAAGAATGGCCAAACCCTCACAACCCCTGATGTTTGAAGAGTTCCAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR CCA 90 bp CTTTGTTTCCCTTCAACTTGGAACTCTTCAAACATCAGGGGTTGTGAGGGTTTGTGGTGCTCTCAGTGGTaGCAACAAACTCTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: LCFPSTWNSSNIRGCEGLWCSQW*QQTLLF
Trigger: GAAAAGAAGAGTTTGTTGCCACCACTGAGAGCACCA...CAAACCCTCACAACCCCTGATGTTTGAAGAGTTCCAAGTTGAAGGGAAACAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR TCA 90 bp CTTTGTTTCCCTTCAACTTGGAACTCTTCAAACATCAGGGGTTGTGAGGGTTTGTCTAATTTATCTCACTaGGGGCCTTTGAGAAAAACG +
Preference number: 4 (lower is better)
Translates to: LCFPSTWNSSNIRGCEGLSNLSH*GPLRKT
Trigger: CGTTTTTCTCAAAGGCCCTCAGTGAGATAAATTAGA...CAAACCCTCACAACCCCTGATGTTTGAAGAGTTCCAAGTTGAAGGGAAACAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR CCA 90 bp ATAAATACGCCAAGAAGAGCTGTGGCTTCTTTCACTGGTGTCCTCAGAAAGGCTTTCTTCCTGTATAGTTaGGATTTACATAACCACTGG +
Preference number: 4 (lower is better)
Translates to: INTPRRAVASFTGVLRKAFFLYS*DLHNHW
Trigger: CCAGTGGTTATGTAAATCCCAACTATACAGGAAGAA...AGCCTTTCTGAGGACACCAGTGAAAGAAGCCACAGCTCTTCTTGGCGTATTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS CCA 90 bp GTGCCGTTGCCTGGCTCCTCCAGCAGGGAGAGGCGGCCCTCGTACTaGGCCTTAACCCACCCCTCGCTGTCCACCAGCAGGGGGCAGCGG +
Preference number: 5 (lower is better)
Translates to: VPLPGSSSRERRPSY*ALTHPSLSTSRGQR
Trigger: CCGCTGCCCCCTGCTGGTGGACAGCGAGGGGTGGGTTAAGGCCCAGTACGAGGGCCGCCTCTCCCTGCTGGAGGAGCCAGGCAACGGCAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS GCA 90 bp GGCTGGGAAGACCGCCAGCAGGCAGGTGAGCACGAAGAGCAGCATTaGTGGTGGGTCCCGAGCGCCGCACCACTCAGGCCGACTTCTCCT +
Preference number: 5 (lower is better)
Translates to: GWEDRQQAGEHEEQH*WWVPSAAPLRPTSP
Trigger: AGGAGAAGTCGGCCTGAGTGGTGCGGCGCTCGGGACCCACCAGCAATGCTGCTCTTCGTGCTCACCTGCCTGCTGGCGGTCTTCCCAGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS CCA 90 bp TGGGAAGACCGCCAGCAGGCAGGTGAGCACGAAGAGCAGCATTGCTaGTGGGTCCCGAGCGCCGCACCACTCAGGCCGACTTCTCCTGTG +
Preference number: 5 (lower is better)
Translates to: WEDRQQAGEHEEQHC*WVPSAAPLRPTSPV
Trigger: CACAGGAGAAGTCGGCCTGAGTGGTGCGGCGCTCGGGACCCACCAGCAATGCTGCTCTTCGTGCTCACCTGCCTGCTGGCGGTCTTCCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS CCA 90 bp TCTAGGCTTCCTGGGGGCCGTCCTGGGCCTCGGCGGCCACGGTGCTaGACTGGAGCAGGAAGTCTTTGTAGGCCATCTCGGCTTCCTCCT +
Preference number: 5 (lower is better)
Translates to: SRLPGGRPGPRRPRC*TGAGSLCRPSRLPP
Trigger: AGGAGGAAGCCGAGATGGCCTACAAAGACTTCCTGCTCCAGTCCAGCACCGTGGCCGCCGAGGCCCAGGACGGCCCCCAGGAAGCCTAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS GCA 90 bp TCAGGGAGACAAGCCGGCTGTTCTCGTCACAGTTCACGAAGGCCTTaGTGGGGCCTTCGTCTTGGCTGGGCAGGGCCTGGCAGCCCGTGT +
Preference number: 5 (lower is better)
Translates to: SGRQAGCSRHSSRRP*WGLRLGWAGPGSPC
Trigger: ACACGGGCTGCCAGGCCCTGCCCAGCCAAGACGAAGGCCCCAGCAAGGCCTTCGTGAACTGTGACGAGAACAGCCGGCTTGTCTCCCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS CCA 90 bp GAAGACCGCCAGCAGGCAGGTGAGCACGAAGAGCAGCATTGCTGGTaGGTCCCGAGCGCCGCACCACTCAGGCCGACTTCTCCTGTGCAA +
Preference number: 5 (lower is better)
Translates to: EDRQQAGEHEEQHCW*VPSAAPLRPTSPVQ
Trigger: TTGCACAGGAGAAGTCGGCCTGAGTGGTGCGGCGCTCGGGACCCACCAGCAATGCTGCTCTTCGTGCTCACCTGCCTGCTGGCGGTCTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS CCA 90 bp CCGGCTGGTGAGCTGGTTGAGGATGACAGTGAAGGTGCCGTTGCCTaGCTCCTCCAGCAGGGAGAGGCGGCCCTCGTACTGGGCCTTAAC +
Preference number: 5 (lower is better)
Translates to: PAGELVEDDSEGAVA*LLQQGEAALVLGLN
Trigger: GTTAAGGCCCAGTACGAGGGCCGCCTCTCCCTGCTGGAGGAGCCAGGCAACGGCACCTTCACTGTCATCCTCAACCAGCTCACCAGCCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS CCA 90 bp GGGAGACAAGCCGGCTGTTCTCGTCACAGTTCACGAAGGCCTTGCTaGGGCCTTCGTCTTGGCTGGGCAGGGCCTGGCAGCCCGTGTTAT +
Preference number: 5 (lower is better)
Translates to: GRQAGCSRHSSRRPC*GLRLGWAGPGSPCY
Trigger: ATAACACGGGCTGCCAGGCCCTGCCCAGCCAAGACGAAGGCCCCAGCAAGGCCTTCGTGAACTGTGACGAGAACAGCCGGCTTGTCTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS CCA 90 bp CTGTTCTCGTCACAGTTCACGAAGGCCTTGCTGGGGCCTTCGTCTTaGCTGGGCAGGGCCTGGCAGCCCGTGTTATTCCACTTGCACCAG +
Preference number: 5 (lower is better)
Translates to: LFSSQFTKALLGPSS*LGRAWQPVLFHLHQ
Trigger: CTGGTGCAAGTGGAATAACACGGGCTGCCAGGCCCTGCCCAGCCAAGACGAAGGCCCCAGCAAGGCCTTCGTGAACTGTGACGAGAACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS CCA 90 bp CGACCACGTCACAGTTTTCCCCACTGCTCTGTCGGCACAGAAATTTaGCCACGTTTGCCACCTCAGGGCCCAGGGCACAGTGGAAGGTCA +
Preference number: 5 (lower is better)
Translates to: RPRHSFPHCSVGTEI*PRLPPQGPGHSGRS
Trigger: TGACCTTCCACTGTGCCCTGGGCCCTGAGGTGGCAAACGTGGCCAAATTTCTGTGCCGACAGAGCAGTGGGGAAAACTGTGACGTGGTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS CCA 90 bp TTCCTCAGGCCTGTGATCACCACACTGAATGAGCCATCCTTGTCCTaGGGGTTGAGCAGGATCCTGCCCTCAAAGGCTGGGGCCCTCTTC +
Preference number: 5 (lower is better)
Translates to: FLRPVITTLNEPSLS*GLSRILPSKAGALF
Trigger: GAAGAGGGCCCCAGCCTTTGAGGGCAGGATCCTGCTCAACCCCCAGGACAAGGATGGCTCATTCAGTGTGGTGATCACAGGCCTGAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS CCA 90 bp TCTCGTCACAGTTCACGAAGGCCTTGCTGGGGCCTTCGTCTTGGCTaGGCAGGGCCTGGCAGCCCGTGTTATTCCACTTGCACCAGTATT +
Preference number: 5 (lower is better)
Translates to: SRHSSRRPCWGLRLG*AGPGSPCYSTCTSI
Trigger: AATACTGGTGCAAGTGGAATAACACGGGCTGCCAGGCCCTGCCCAGCCAAGACGAAGGCCCCAGCAAGGCCTTCGTGAACTGTGACGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR CAA 90 bp TGGGTCCATGTGAGTGACAGAAATGGTGCGGCCTGGGAAAGATCTCCCTCCTTTGCACGAAGAGCAGCATaGCTGGTGGGTCCCGAGCGC +
Preference number: 5 (lower is better)
Translates to: WVHVSDRNGAAWERSPSFARRAA*LVGPER
Trigger: GCGCTCGGGACCCACCAGCAATGCTGCTCTTCGTGC...AAAGGAGGGAGATCTTTCCCAGGCCGCACCATTTCTGTCACTCACATGGACCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR CAA 90 bp TGGGTCCATGTGAGTGACAGAAATGGTGCGGCCTGGGAAAGATCTCCCTCCTTTACAGTGAAGGTGCCGTaGCCTGGCTCCTCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: WVHVSDRNGAAWERSPSFTVKVP*PGSSSR
Trigger: CCTGCTGGAGGAGCCAGGCAACGGCACCTTCACTGT...AAAGGAGGGAGATCTTTCCCAGGCCGCACCATTTCTGTCACTCACATGGACCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR CAA 90 bp TGCAAGTGGGACCTCCTCATGCCACCCTCATCCCCAATAGGAACAATTAGGCCAGAAATTTGGCCACGTTaGCCACCTCAGGGCCCAGGG +
Preference number: 5 (lower is better)
Translates to: CKWDLLMPPSSPIGTIRPEIWPR*PPQGPG
Trigger: CCCTGGGCCCTGAGGTGGCAAACGTGGCCAAATTTC...TGGCCTAATTGTTCCTATTGGGGATGAGGGTGGCATGAGGAGGTCCCACTTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR CAA 90 bp GGTGTCCTCAGAAAGGCTGTGAGCAGTGTTGGTGGCATACCTGTCACAGCATCTGAGGCGGCAGATCACTaGAGGCCAGGAGTTCGAGAC +
Preference number: 5 (lower is better)
Translates to: GVLRKAVSSVGGIPVTASEAADH*RPGVRD
Trigger: GTCTCGAACTCCTGGCCTCAAGTGATCTGCCGCCTC...AGATGCTGTGACAGGTATGCCACCAACACTGCTCACAGCCTTTCTGAGGACACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS CCA 90 bp ACACTGAGTTACCTTCCACACTATTCACCTCCTCGGGACCAAATATaGGACTCTTCGTGGAGATGGCTGGGAAGACCGCCAGCAGGCAGG +
Preference number: 5 (lower is better)
Translates to: TLSYLPHYSPPRDQI*DSSWRWLGRPPAGR
Trigger: CCTGCCTGCTGGCGGTCTTCCCAGCCATCTCCACGAAGAGTCCCATATTTGGTCCCGAGGAGGTGAATAGTGTGGAAGGTAACTCAGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS TCA 90 bp GTGCCGGTTGACAGAGGTGGGTGGGTAGTAGCACGTGATGGACACTaGGTTACCTTCCACACTATTCACCTCCTCGGGACCAAATATGGG +
Preference number: 5 (lower is better)
Translates to: VPVDRGGWVVARDGH*VTFHTIHLLGTKYG
Trigger: CCCATATTTGGTCCCGAGGAGGTGAATAGTGTGGAAGGTAACTCAGTGTCCATCACGTGCTACTACCCACCCACCTCTGTCAACCGGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS TCA 90 bp TCCTCAGAGCTGCCGGAATCCACAGATGCTCTGCTCCCATCGGCTTaGTCTCTTGTATCTGCCACCGCCTTTTCCTCTGCAAAAAGCCTG +
Preference number: 5 (lower is better)
Translates to: SSELPESTDALLPSA*SLVSATAFSSAKSL
Trigger: CAGGCTTTTTGCAGAGGAAAAGGCGGTGGCAGATACAAGAGATCAAGCCGATGGGAGCAGAGCATCTGTGGATTCCGGCAGCTCTGAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS GCA 90 bp CACAAATGTGCCGTTCTCCGGGAAGTTGGTGAGGTTAGCCCTGCCTaGATATTTGCTGGAGACGTAGCCCTCCGAGGAGATGAGGGTTAT +
Preference number: 5 (lower is better)
Translates to: HKCAVLREVGEVSPA*IFAGDVALRGDEGY
Trigger: ATAACCCTCATCTCCTCGGAGGGCTACGTCTCCAGCAAATATGCAGGCAGGGCTAACCTCACCAACTTCCCGGAGAACGGCACATTTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR CAA 90 bp TGCAAGTGGGACCTCCTCATGCCACCCTCATCCCCAATAGGAACAATTAGGCCACTCTTCCCCAGGGTGTaGACGACCACGTCACAGTTT +
Preference number: 5 (lower is better)
Translates to: CKWDLLMPPSSPIGTIRPLFPRV*TTTSQF
Trigger: AAACTGTGACGTGGTCGTCAACACCCTGGGGAAGAG...TGGCCTAATTGTTCCTATTGGGGATGAGGGTGGCATGAGGAGGTCCCACTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR CAA 90 bp GGGAGGGATGGAGTGGAGGGAAAAATTCTGTTGACATCCCATGATAAGGGTGCATCCTTGTCCTGGGGGTaGAGCAGGATCCTGCCCTCA +
Preference number: 5 (lower is better)
Translates to: GRDGVEGKILLTSHDKGASLSWG*SRILPS
Trigger: TGAGGGCAGGATCCTGCTCAACCCCCAGGACAAGGA...TGCACCCTTATCATGGGATGTCAACAGAATTTTTCCCTCCACTCCATCCCTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR CAA 90 bp ATTAGGCCAGGCTTTGATGTCACTGAGGAGGGGACCAGCACGCCTCTGAGGACATCTCCTTCGATAATCTaGATCTCCACGGTGGTCCTC +
Preference number: 5 (lower is better)
Translates to: IRPGFDVTEEGTSTPLRTSPSII*ISTVVL
Trigger: GAGGACCACCGTGGAGATCAAGATTATCGAAGGAGA...TGTCCTCAGAGGCGTGCTGGTCCCCTCCTCAGTGACATCAAAGCCTGGCCTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR CAA 90 bp ATTAGGCCAGGCTTTGATGTCACTGAGGAGGGGACCAGCACGCCTCTGAGGACACATCGGCTTGATCTCTaGTATCTGCCACCGCCTTTT +
Preference number: 5 (lower is better)
Translates to: IRPGFDVTEEGTSTPLRTHRLDL*YLPPPF
Trigger: AAAAGGCGGTGGCAGATACAAGAGATCAAGCCGATG...TGTCCTCAGAGGCGTGCTGGTCCCCTCCTCAGTGACATCAAAGCCTGGCCTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR CAA 90 bp GGAGCTGAGGGCCCCAGGATCGACATGATTCTGAAGGTGATTGTCATGGGTGCAGCTCCCATGTTGTCATaGGCTCCAAATTCCCTGGAG +
Preference number: 5 (lower is better)
Translates to: GAEGPRIDMILKVIVMGAAPMLS*APNSLE
Trigger: CTCCAGGGAATTTGGAGCCAATGACAACATGGGAGC...TGCACCCATGACAATCACCTTCAGAATCATGTCGATCCTGGGGCCCTCAGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS GCA 90 bp CTTCGTCTTGGCTGGGCAGGGCCTGGCAGCCCGTGTTATTCCACTTaGACCAGTATTTCTCGTACGAGGAGAATTTGCATGGAAAGTGAC +
Preference number: 5 (lower is better)
Translates to: LRLGWAGPGSPCYST*TSISRTRRICMESD
Trigger: GTCACTTTCCATGCAAATTCTCCTCGTACGAGAAATACTGGTGCAAGTGGAATAACACGGGCTGCCAGGCCCTGCCCAGCCAAGACGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS GCA 90 bp GGAATCCACAGATGCTCTGCTCCCATCGGCTTGATCTCTTGTATCTaGCACCGCCTTTTCCTCTGCAAAAAGCCTGGGATCCTGAATGGC +
Preference number: 5 (lower is better)
Translates to: GIHRCSAPIGLISCI*HRLFLCKKPGILNG
Trigger: GCCATTCAGGATCCCAGGCTTTTTGCAGAGGAAAAGGCGGTGGCAGATACAAGAGATCAAGCCGATGGGAGCAGAGCATCTGTGGATTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR CAA 90 bp AAATACGCCAAGAAGAGCTGTGGCTTCTTTCACTGGTGTCCTCAGAAAGGCTGTCCGTTCTCCGGGAAGTaGGTGAGGTTAGCCCTGCCT +
Preference number: 5 (lower is better)
Translates to: KYAKKSCGFFHWCPQKGCPFSGK*VRLALP
Trigger: AGGCAGGGCTAACCTCACCAACTTCCCGGAGAACGG...ACAGCCTTTCTGAGGACACCAGTGAAAGAAGCCACAGCTCTTCTTGGCGTATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR CAA 90 bp GGGAGGGATGGAGTGGAGGGAAAAATTCTGTTGACATCCCATGATAAGGGTGCACTGAATGAGCCATCCTaGTCCTGGGGGTTGAGCAGG +
Preference number: 5 (lower is better)
Translates to: GRDGVEGKILLTSHDKGALNEPS*SWGLSR
Trigger: CCTGCTCAACCCCCAGGACAAGGATGGCTCATTCAG...TGCACCCTTATCATGGGATGTCAACAGAATTTTTCCCTCCACTCCATCCCTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR CAA 90 bp GACAGAAATGGTGCGGCCTGGGAAAGATCTCCCTCCTTTACATTTTCTCTTCTCCAGTTCACGAAGGCCTaGCTGGGGCCTTCGTCTTGG +
Preference number: 5 (lower is better)
Translates to: DRNGAAWERSPSFTFSLLQFTKA*LGPSSW
Trigger: CCAAGACGAAGGCCCCAGCAAGGCCTTCGTGAACTG...GAGAAGAGAAAATGTAAAGGAGGGAGATCTTTCCCAGGCCGCACCATTTCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR CAA 90 bp ATAGGAACAATTAGGCCAGGCTTTGATGTCACTGAGGAGGGGACCAGCACGCCTTCTGCTCCCATCGGCTaGATCTCTTGTATCTGCCAC +
Preference number: 5 (lower is better)
Translates to: IGTIRPGFDVTEEGTSTPSAPIG*ISCICH
Trigger: GTGGCAGATACAAGAGATCAAGCCGATGGGAGCAGA...AGGCGTGCTGGTCCCCTCCTCAGTGACATCAAAGCCTGGCCTAATTGTTCCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR CAA 90 bp GGTGTCCTCAGAAAGGCTGTGAGCAGTGTTGGTGGCATACCTGTCACAGCATCTCAATTAGGCCAGGCTTaGATGTCACTGAGGAGGGGA +
Preference number: 5 (lower is better)
Translates to: GVLRKAVSSVGGIPVTASQLGQA*MSLRRG
Trigger: TCCCCTCCTCAGTGACATCAAAGCCTGGCCTAATTG...AGATGCTGTGACAGGTATGCCACCAACACTGCTCACAGCCTTTCTGAGGACACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR CAA 90 bp GGTGTCCTCAGAAAGGCTGTGAGCAGTGTTGGTGGCATACCTGTCACAGCATCTCAGCTTGTAGGCTGGTaGAAGTACAGAACTCAGAGG +
Preference number: 5 (lower is better)
Translates to: GVLRKAVSSVGGIPVTASQLVGW*KYRTQR
Trigger: CCTCTGAGTTCTGTACTTCAACCAGCCTACAAGCTG...AGATGCTGTGACAGGTATGCCACCAACACTGCTCACAGCCTTTCTGAGGACACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS TCA 90 bp CACTTGCACCAGTATTTCTCGTACGAGGAGAATTTGCATGGAAAGTaGCAGGGGACCTTGAGAGTCTCTCCCAGCACAGCCGTGACATTC +
Preference number: 5 (lower is better)
Translates to: HLHQYFSYEENLHGK*QGTLRVSPSTAVTF
Trigger: GAATGTCACGGCTGTGCTGGGAGAGACTCTCAAGGTCCCCTGTCACTTTCCATGCAAATTCTCCTCGTACGAGAAATACTGGTGCAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS TCA 90 bp TGGTGGCAACAAACTCTTCTTTTCCTCCGAGGGATGTCTCCTGAGTaGTCGAAGAGGCTCCCATGTTGTCATTGGCTCCAAATTCCCTGG +
Preference number: 5 (lower is better)
Translates to: WWQQTLLFLRGMSPE*SKRLPCCHWLQIPW
Trigger: CCAGGGAATTTGGAGCCAATGACAACATGGGAGCCTCTTCGATCACTCAGGAGACATCCCTCGGAGGAAAAGAAGAGTTTGTTGCCACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356495.5
ENST00000487208.1
CDS CCA 90 bp CCTCCTTGGATGACCTTTTTGCCTTCTTGGGTTCTTTGGTCTCTGTaGTGCTCTCAGTGGTGGCAACAAACTCTTCTTTTCCTCCGAGGG +
Preference number: 5 (lower is better)
Translates to: PPWMTFLPSWVLWSL*CSQWWQQTLLFLRG
Trigger: CCCTCGGAGGAAAAGAAGAGTTTGTTGCCACCACTGAGAGCACCACAGAGACCAAAGAACCCAAGAAGGCAAAAAGGTCATCCAAGGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS CCA 90 bp TCTTCCTCCTCACCCTTTTTGCCTTCTTGGGTTCTTTGGTCTCTGTaGTGCTCTCAGTGGTGGCAACAAACTCTTCTTTTCCTCCGAGGG +
Preference number: 5 (lower is better)
Translates to: SSSSPFLPSWVLWSL*CSQWWQQTLLFLRG
Trigger: CCCTCGGAGGAAAAGAAGAGTTTGTTGCCACCACTGAGAGCACCACAGAGACCAAAGAACCCAAGAAGGCAAAAAGGGTGAGGAGGAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487208.1
CDS-3UTR CAA 90 bp CTTTGTTTCCCTTCAACTTGGAACTCTTCAAACATCAGGGGTTGTGAGGGTTTGGACAGGCCTCGGCTATaGATGCCCAGGCCACACTTG +
Preference number: 5 (lower is better)
Translates to: LCFPSTWNSSNIRGCEGLDRPRL*MPRPHL
Trigger: CAAGTGTGGCCTGGGCATCAATAGCCGAGGCCTGTC...CAAACCCTCACAACCCCTGATGTTTGAAGAGTTCCAAGTTGAAGGGAAACAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR CAA 90 bp GACAGAAATGGTGCGGCCTGGGAAAGATCTCCCTCCTTTACATTTTCTCTTCTCGTCTTGAAAGGGCAGTaGATGGTCACCGTTCTGCCC +
Preference number: 5 (lower is better)
Translates to: DRNGAAWERSPSFTFSLLVLKGQ*MVTVLP
Trigger: GGGCAGAACGGTGACCATCAACTGCCCTTTCAAGAC...GAGAAGAGAAAATGTAAAGGAGGGAGATCTTTCCCAGGCCGCACCATTTCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR CAA 90 bp GACAGAAATGGTGCGGCCTGGGAAAGATCTCCCTCCTTTACATTTTCTCTTCTCCTCATTGACGAAGAGTaGCCAGGCCTGGATAGGCGA +
Preference number: 5 (lower is better)
Translates to: DRNGAAWERSPSFTFSLLLIDEE*PGLDRR
Trigger: TCGCCTATCCAGGCCTGGCAACTCTTCGTCAATGAG...GAGAAGAGAAAATGTAAAGGAGGGAGATCTTTCCCAGGCCGCACCATTTCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS TCA 90 bp TCAGTGGTGGCAACAAACTCTTCTTTTCCTCCGAGGGATGTCTCCTaGGTGATCGAAGAGGCTCCCATGTTGTCATTGGCTCCAAATTCC +
Preference number: 5 (lower is better)
Translates to: SVVATNSSFPPRDVS*VIEEAPMLSLAPNS
Trigger: GGAATTTGGAGCCAATGACAACATGGGAGCCTCTTCGATCACTCAGGAGACATCCCTCGGAGGAAAAGAAGAGTTTGTTGCCACCACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356495.5
ENST00000487208.1
CDS CCA 90 bp TGGAGGTCAGCATTCTTCTTATTACTATTGGAATCATCCCCAGCCTaGCAGAGATACTGCCCAGCATCGCTGAGCCTGAGTTGGTTGATG +
Preference number: 5 (lower is better)
Translates to: WRSAFFLLLLESSPA*QRYCPASLSLSWLM
Trigger: CATCAACCAACTCAGGCTCAGCGATGCTGGGCAGTATCTCTGCCAGGCTGGGGATGATTCCAATAGTAATAAGAAGAATGCTGACCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS CCA 90 bp GTTATTCCACTTGCACCAGTATTTCTCGTACGAGGAGAATTTGCATaGAAAGTGACAGGGGACCTTGAGAGTCTCTCCCAGCACAGCCGT +
Preference number: 5 (lower is better)
Translates to: VIPLAPVFLVRGEFA*KVTGDLESLSQHSR
Trigger: ACGGCTGTGCTGGGAGAGACTCTCAAGGTCCCCTGTCACTTTCCATGCAAATTCTCCTCGTACGAGAAATACTGGTGCAAGTGGAATAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR CAA 90 bp GACAGAAATGGTGCGGCCTGGGAAAGATCTCCCTCCTTTACATTTTCTCTTCTCTGTCGGCACAGAAATTaGGCCACGTTTGCCACCTCA +
Preference number: 5 (lower is better)
Translates to: DRNGAAWERSPSFTFSLLCRHRN*ATFATS
Trigger: TGAGGTGGCAAACGTGGCCAAATTTCTGTGCCGACA...GAGAAGAGAAAATGTAAAGGAGGGAGATCTTTCCCAGGCCGCACCATTTCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR CAA 90 bp ATAAATACGCCAAGAAGAGCTGTGGCTTCTTTCACTGGTGTCCTCAGAAAGGCTATCGTGGACTCCTCATaGACGAAGAGTTGCCAGGCC +
Preference number: 5 (lower is better)
Translates to: INTPRRAVASFTGVLRKAIVDSS*TKSCQA
Trigger: GGCCTGGCAACTCTTCGTCAATGAGGAGTCCACGAT...AGCCTTTCTGAGGACACCAGTGAAAGAAGCCACAGCTCTTCTTGGCGTATTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR CAA 90 bp CTTTGTTTCCCTTCAACTTGGAACTCTTCAAACATCAGGGGTTGTGAGGGTTTGCGGCTGGTGAGCTGGTaGAGGATGACAGTGAAGGTG +
Preference number: 5 (lower is better)
Translates to: LCFPSTWNSSNIRGCEGLRLVSW*RMTVKV
Trigger: CACCTTCACTGTCATCCTCAACCAGCTCACCAGCCG...CAAACCCTCACAACCCCTGATGTTTGAAGAGTTCCAAGTTGAAGGGAAACAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR CAA 90 bp TCTCCGTACCTGAGGTTCTCTCAACAGAAAGAAGTTGCAAGTGGGACCTCCTCAATCTCGGCTTCCTCCTaGGATGACCTTTTTGCCTTC +
Preference number: 5 (lower is better)
Translates to: SPYLRFSQQKEVASGTSSISASS*DDLFAF
Trigger: GAAGGCAAAAAGGTCATCCAAGGAGGAAGCCGAGAT...TGAGGAGGTCCCACTTGCAACTTCTTTCTGTTGAGAGAACCTCAGGTACGGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR CAA 90 bp GGGAGGGATGGAGTGGAGGGAAAAATTCTGTTGACATCCCATGATAAGGGTGCATTCAGTGAGCCGAGATaGTGTCACTGCATTCCAGTC +
Preference number: 5 (lower is better)
Translates to: GRDGVEGKILLTSHDKGAFSEPR*CHCIPV
Trigger: GACTGGAATGCAGTGACACAATCTCGGCTCACTGAA...TGCACCCTTATCATGGGATGTCAACAGAATTTTTCCCTCCACTCCATCCCTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS GCA 90 bp TTCTTCTTATTACTATTGGAATCATCCCCAGCCTGGCAGAGATACTaGCCAGCATCGCTGAGCCTGAGTTGGTTGATGACAACGCTGAAC +
Preference number: 5 (lower is better)
Translates to: FFLLLLESSPAWQRY*PASLSLSWLMTTLN
Trigger: GTTCAGCGTTGTCATCAACCAACTCAGGCTCAGCGATGCTGGGCAGTATCTCTGCCAGGCTGGGGATGATTCCAATAGTAATAAGAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR CAA 90 bp GACAGAAATGGTGCGGCCTGGGAAAGATCTCCCTCCTTTACATTTTCTCTTCTCCTGAGCCTGAGTTGGTaGATGACAACGCTGAACAGT +
Preference number: 5 (lower is better)
Translates to: DRNGAAWERSPSFTFSLLLSLSW*MTTLNS
Trigger: ACTGTTCAGCGTTGTCATCAACCAACTCAGGCTCAG...GAGAAGAGAAAATGTAAAGGAGGGAGATCTTTCCCAGGCCGCACCATTTCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR CAA 90 bp GACAGAAATGGTGCGGCCTGGGAAAGATCTCCCTCCTTTACATTTTCTCTTCTCATCGCTGAGCCTGAGTaGGTTGATGACAACGCTGAA +
Preference number: 5 (lower is better)
Translates to: DRNGAAWERSPSFTFSLLIAEPE*VDDNAE
Trigger: TTCAGCGTTGTCATCAACCAACTCAGGCTCAGCGAT...GAGAAGAGAAAATGTAAAGGAGGGAGATCTTTCCCAGGCCGCACCATTTCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR CAA 90 bp GACAGAAATGGTGCGGCCTGGGAAAGATCTCCCTCCTTTACATTTTCTCTTCTCACATTCCCTGGTACCTaGAGGTTTGGTTCTCCTTCG +
Preference number: 5 (lower is better)
Translates to: DRNGAAWERSPSFTFSLLTFPGT*RFGSPS
Trigger: CGAAGGAGAACCAAACCTCAAGGTACCAGGGAATGT...GAGAAGAGAAAATGTAAAGGAGGGAGATCTTTCCCAGGCCGCACCATTTCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR CAA 90 bp GGTGTCCTCAGAAAGGCTGTGAGCAGTGTTGGTGGCATACCTGTCACAGCATCTGAGGGAAAAATTCTGTaGACATCCCATGATAAGGGT +
Preference number: 5 (lower is better)
Translates to: GVLRKAVSSVGGIPVTASEGKIL*TSHDKG
Trigger: ACCCTTATCATGGGATGTCAACAGAATTTTTCCCTC...AGATGCTGTGACAGGTATGCCACCAACACTGCTCACAGCCTTTCTGAGGACACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR CAA 90 bp ACAGAAATGGTGCGGCCTGGGAAAGATCTCCCTCCTTTACATTTTCTCTTCTCCAGGCATGAGAATAGCTaGAACCTGGAAGGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: TEMVRPGKDLPPLHFLFSRHENS*NLEGRG
Trigger: ACCTCTGCCTTCCAGGTTCAAGCTATTCTCATGCCT...GGAGAAGAGAAAATGTAAAGGAGGGAGATCTTTCCCAGGCCGCACCATTTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR CAA 90 bp GGAGCTGAGGGCCCCAGGATCGACATGATTCTGAAGGTGATTGTCATGGGTGCATTGTTTCCCTTCAACTaGGAACTCTTCAAACATCAG +
Preference number: 5 (lower is better)
Translates to: GAEGPRIDMILKVIVMGALFPFN*ELFKHQ
Trigger: CTGATGTTTGAAGAGTTCCAAGTTGAAGGGAAACAA...TGCACCCATGACAATCACCTTCAGAATCATGTCGATCCTGGGGCCCTCAGCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR CAA 90 bp TCTCCGTACCTGAGGTTCTCTCAACAGAAAGAAGTTGCAAGTGGGACCTCCTCATACAGGCCTATCTGCTaGTACAAGGACTTCCTCTTT +
Preference number: 5 (lower is better)
Translates to: SPYLRFSQQKEVASGTSSYRPIC*YKDFLF
Trigger: AAAGAGGAAGTCCTTGTACAAGCAGATAGGCCTGTA...TGAGGAGGTCCCACTTGCAACTTCTTTCTGTTGAGAGAACCTCAGGTACGGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR CAA 90 bp AAATACGCCAAGAAGAGCTGTGGCTTCTTTCACTGGTGTCCTCAGAAAGGCTGTCCCGTGTTATTCCACTaGCACCAGTATTTCTCGTAC +
Preference number: 5 (lower is better)
Translates to: KYAKKSCGFFHWCPQKGCPVLFH*HQYFSY
Trigger: GTACGAGAAATACTGGTGCAAGTGGAATAACACGGG...ACAGCCTTTCTGAGGACACCAGTGAAAGAAGCCACAGCTCTTCTTGGCGTATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR CAA 90 bp GACAGAAATGGTGCGGCCTGGGAAAGATCTCCCTCCTTTACATTTTCTCTTCTCCTCAACAGAAAGAAGTaGCAAGTGGGACCTCCTCAT +
Preference number: 5 (lower is better)
Translates to: DRNGAAWERSPSFTFSLLLNRKK*QVGPPH
Trigger: ATGAGGAGGTCCCACTTGCAACTTCTTTCTGTTGAG...GAGAAGAGAAAATGTAAAGGAGGGAGATCTTTCCCAGGCCGCACCATTTCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR CAA 90 bp GACAGAAATGGTGCGGCCTGGGAAAGATCTCCCTCCTTTACATTTTCTCTTCTCAGGGGTTGTGAGGGTTaGGCCATTCTTTTATCTTGG +
Preference number: 5 (lower is better)
Translates to: DRNGAAWERSPSFTFSLLRGCEG*AILLSW
Trigger: CCAAGATAAAAGAATGGCCAAACCCTCACAACCCCT...GAGAAGAGAAAATGTAAAGGAGGGAGATCTTTCCCAGGCCGCACCATTTCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS TCA 90 bp GTATTCTTCCTGTATAGTTGGGATTTACATAACCACTGGAGTCGATaGCCAGCACAGGGTACAGGCCTATCTGCTTGTACAAGGACTTCC +
Preference number: 5 (lower is better)
Translates to: VFFLYSWDLHNHWSR*PAQGTGLSACTRTS
Trigger: GGAAGTCCTTGTACAAGCAGATAGGCCTGTACCCTGTGCTGGTCATCGACTCCAGTGGTTATGTAAATCCCAACTATACAGGAAGAATAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356495.5
ENST00000491503.1
CDS-3UTR CAA 90 bp ATAAATACGCCAAGAAGAGCTGTGGCTTCTTTCACTGGTGTCCTCAGAAAGGCTGACCTTTTTGCCTTCTaGGGTTCTTTGGTCTCTGTG +
Preference number: 5 (lower is better)
Translates to: INTPRRAVASFTGVLRKADLFAF*GSLVSV
Trigger: CACAGAGACCAAAGAACCCAAGAAGGCAAAAAGGTC...AGCCTTTCTGAGGACACCAGTGAAAGAAGCCACAGCTCTTCTTGGCGTATTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR CAA 90 bp ACAGAAATGGTGCGGCCTGGGAAAGATCTCCCTCCTTTACATTTTCTCTTCTCCCAAGGACTTCCTCTTTaGAGCATTCTCAGTCTTGAA +
Preference number: 5 (lower is better)
Translates to: TEMVRPGKDLPPLHFLFSQGLPL*SILSLE
Trigger: TTCAAGACTGAGAATGCTCAAAAGAGGAAGTCCTTG...GGAGAAGAGAAAATGTAAAGGAGGGAGATCTTTCCCAGGCCGCACCATTTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS-3UTR CAA 90 bp CTTTGTTTCCCTTCAACTTGGAACTCTTCAAACATCAGGGGTTGTGAGGGTTTGCCTTGGATGACCTTTTaGCCTTCTTGGGTTCTTTGG +
Preference number: 5 (lower is better)
Translates to: LCFPSTWNSSNIRGCEGLPWMTF*PSWVLW
Trigger: CCAAAGAACCCAAGAAGGCAAAAAGGTCATCCAAGG...CAAACCCTCACAACCCCTGATGTTTGAAGAGTTCCAAGTTGAAGGGAAACAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS CCA 72 bp CCTGGCTCCTCCAGCAGGGAGAGGCGGCCCTCGTACTaGGCCTTAACCCACCCCTCGCTGTCCACCAGCAGG +
Preference number: 6 (lower is better)
Translates to: PGSSSRERRPSY*ALTHPSLSTSR
Trigger: CCTGCTGGTGGACAGCGAGGGGTGGGTTAAGGCCCAGTACGAGGGCCGCCTCTCCCTGCTGGAGGAGCCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS CCA 72 bp CCTGGGGGCCGTCCTGGGCCTCGGCGGCCACGGTGCTaGACTGGAGCAGGAAGTCTTTGTAGGCCATCTCGG +
Preference number: 6 (lower is better)
Translates to: PGGRPGPRRPRC*TGAGSLCRPSR
Trigger: CCGAGATGGCCTACAAAGACTTCCTGCTCCAGTCCAGCACCGTGGCCGCCGAGGCCCAGGACGGCCCCCAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS CAA 90 bp GCGTCCCGGCTGGTGAGCTGGTTGAGGATGACAGTGAAGGTGCCGTaGCCTGGCTCCTCCAGCAGGGAGAGGCGGCCCTCGTACTGGGCC +
Preference number: 6 (lower is better)
Translates to: ASRLVSWLRMTVKVP*PGSSSRERRPSYWA
Trigger: GGCCCAGTACGAGGGCCGCCTCTCCCTGCTGGAGGAGCCAGGCAACGGCACCTTCACTGTCATCCTCAACCAGCTCACCAGCCGGGACGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS CCA 72 bp CGCCAGCAGGCAGGTGAGCACGAAGAGCAGCATTGCTaGTGGGTCCCGAGCGCCGCACCACTCAGGCCGACT +
Preference number: 6 (lower is better)
Translates to: RQQAGEHEEQHC*WVPSAAPLRPT
Trigger: AGTCGGCCTGAGTGGTGCGGCGCTCGGGACCCACCAGCAATGCTGCTCTTCGTGCTCACCTGCCTGCTGGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS CCA 72 bp CAGCAGGCAGGTGAGCACGAAGAGCAGCATTGCTGGTaGGTCCCGAGCGCCGCACCACTCAGGCCGACTTCT +
Preference number: 6 (lower is better)
Translates to: QQAGEHEEQHCW*VPSAAPLRPTS
Trigger: AGAAGTCGGCCTGAGTGGTGCGGCGCTCGGGACCCACCAGCAATGCTGCTCTTCGTGCTCACCTGCCTGCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS CAA 72 bp CTGGTGAGCTGGTTGAGGATGACAGTGAAGGTGCCGTaGCCTGGCTCCTCCAGCAGGGAGAGGCGGCCCTCG +
Preference number: 6 (lower is better)
Translates to: LVSWLRMTVKVP*PGSSSRERRPS
Trigger: CGAGGGCCGCCTCTCCCTGCTGGAGGAGCCAGGCAACGGCACCTTCACTGTCATCCTCAACCAGCTCACCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS CCA 72 bp GAGCTGGTTGAGGATGACAGTGAAGGTGCCGTTGCCTaGCTCCTCCAGCAGGGAGAGGCGGCCCTCGTACTG +
Preference number: 6 (lower is better)
Translates to: ELVEDDSEGAVA*LLQQGEAALVL
Trigger: CAGTACGAGGGCCGCCTCTCCCTGCTGGAGGAGCCAGGCAACGGCACCTTCACTGTCATCCTCAACCAGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS TCA 72 bp TGCCACCTCAGGGCCCAGGGCACAGTGGAAGGTCACTaGGCCCCTCAGGTCTTCATAAACCAGCTCGGGCTC +
Preference number: 6 (lower is better)
Translates to: CHLRAQGTVEGH*APQVFINQLGL
Trigger: GAGCCCGAGCTGGTTTATGAAGACCTGAGGGGCTCAGTGACCTTCCACTGTGCCCTGGGCCCTGAGGTGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS GCA 72 bp TTCAGGGACACAGCCTGCTGGCCAGTTGGTAACCCCTaGCTCTCTAGGAGCTACTGGCAGGGCACTGGACGC +
Preference number: 6 (lower is better)
Translates to: FRDTACWPVGNP*LSRSYWQGTGR
Trigger: GCGTCCAGTGCCCTGCCAGTAGCTCCTAGAGAGGCAGGGGTTACCAACTGGCCAGCAGGCTGTGTCCCTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS GCA 72 bp CCCACTGCTCTGTCGGCACAGAAATTTGGCCACGTTTaGCACCTCAGGGCCCAGGGCACAGTGGAAGGTCAC +
Preference number: 6 (lower is better)
Translates to: PTALSAQKFGHV*HLRAQGTVEGH
Trigger: GTGACCTTCCACTGTGCCCTGGGCCCTGAGGTGGCAAACGTGGCCAAATTTCTGTGCCGACAGAGCAGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS CAA 72 bp CCCCACTGCTCTGTCGGCACAGAAATTTGGCCACGTTaGCCACCTCAGGGCCCAGGGCACAGTGGAAGGTCA +
Preference number: 6 (lower is better)
Translates to: PHCSVGTEIWPR*PPQGPGHSGRS
Trigger: TGACCTTCCACTGTGCCCTGGGCCCTGAGGTGGCAAACGTGGCCAAATTTCTGTGCCGACAGAGCAGTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS CAA 72 bp GCTGCGGGGAATCGTGGACTCCTCATTGACGAAGAGTaGCCAGGCCTGGATAGGCGAGCCTTCCTGCAGCTG +
Preference number: 6 (lower is better)
Translates to: AAGNRGLLIDEE*PGLDRRAFLQL
Trigger: CAGCTGCAGGAAGGCTCGCCTATCCAGGCCTGGCAACTCTTCGTCAATGAGGAGTCCACGATTCCCCGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS CAA 90 bp CACAGTTTTCCCCACTGCTCTGTCGGCACAGAAATTTGGCCACGTTaGCCACCTCAGGGCCCAGGGCACAGTGGAAGGTCACTGAGCCCC +
Preference number: 6 (lower is better)
Translates to: HSFPHCSVGTEIWPR*PPQGPGHSGRSLSP
Trigger: GGGGCTCAGTGACCTTCCACTGTGCCCTGGGCCCTGAGGTGGCAAACGTGGCCAAATTTCTGTGCCGACAGAGCAGTGGGGAAAACTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS CAA 90 bp TCCTCCTTCCTCAGGCCTGTGATCACCACACTGAATGAGCCATCCTaGTCCTGGGGGTTGAGCAGGATCCTGCCCTCAAAGGCTGGGGCC +
Preference number: 6 (lower is better)
Translates to: SSFLRPVITTLNEPS*SWGLSRILPSKAGA
Trigger: GGCCCCAGCCTTTGAGGGCAGGATCCTGCTCAACCCCCAGGACAAGGATGGCTCATTCAGTGTGGTGATCACAGGCCTGAGGAAGGAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS GCA 72 bp CTGACCATCCGAATGGGCTCCACACAGGTAGCGCCCTaGATCCTCCTTCCTCAGGCCTGTGATCACCACACT +
Preference number: 6 (lower is better)
Translates to: LTIRMGSTQVAP*ILLPQACDHHT
Trigger: AGTGTGGTGATCACAGGCCTGAGGAAGGAGGATGCAGGGCGCTACCTGTGTGGAGCCCATTCGGATGGTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS CAA 72 bp ATCACCACACTGAATGAGCCATCCTTGTCCTGGGGGTaGAGCAGGATCCTGCCCTCAAAGGCTGGGGCCCTC +
Preference number: 6 (lower is better)
Translates to: ITTLNEPSLSWG*SRILPSKAGAL
Trigger: GAGGGCCCCAGCCTTTGAGGGCAGGATCCTGCTCAACCCCCAGGACAAGGATGGCTCATTCAGTGTGGTGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS CAA 90 bp ACGACCACGTCACAGTTTTCCCCACTGCTCTGTCGGCACAGAAATTaGGCCACGTTTGCCACCTCAGGGCCCAGGGCACAGTGGAAGGTC +
Preference number: 6 (lower is better)
Translates to: TTTSQFSPLLCRHRN*ATFATSGPRAQWKV
Trigger: GACCTTCCACTGTGCCCTGGGCCCTGAGGTGGCAAACGTGGCCAAATTTCTGTGCCGACAGAGCAGTGGGGAAAACTGTGACGTGGTCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS GCA 72 bp GCCGTTCTCCGGGAAGTTGGTGAGGTTAGCCCTGCCTaGATATTTGCTGGAGACGTAGCCCTCCGAGGAGAT +
Preference number: 6 (lower is better)
Translates to: AVLREVGEVSPA*IFAGDVALRGD
Trigger: ATCTCCTCGGAGGGCTACGTCTCCAGCAAATATGCAGGCAGGGCTAACCTCACCAACTTCCCGGAGAACGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS CCA 72 bp CACAGTTTTCCCCACTGCTCTGTCGGCACAGAAATTTaGCCACGTTTGCCACCTCAGGGCCCAGGGCACAGT +
Preference number: 6 (lower is better)
Translates to: HSFPHCSVGTEI*PRLPPQGPGHS
Trigger: ACTGTGCCCTGGGCCCTGAGGTGGCAAACGTGGCCAAATTTCTGTGCCGACAGAGCAGTGGGGAAAACTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS CCA 72 bp CCTGTGATCACCACACTGAATGAGCCATCCTTGTCCTaGGGGTTGAGCAGGATCCTGCCCTCAAAGGCTGGG +
Preference number: 6 (lower is better)
Translates to: PVITTLNEPSLS*GLSRILPSKAG
Trigger: CCCAGCCTTTGAGGGCAGGATCCTGCTCAACCCCCAGGACAAGGATGGCTCATTCAGTGTGGTGATCACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS GCA 72 bp CGCTGCCTTCCTCTCTTCAACTGCCACATAGACGGCTaGAGTCTCTCCATAGAAGTGGCCCTGCTTCACTCC +
Preference number: 6 (lower is better)
Translates to: RCLPLFNCHIDG*SLSIEVALLHS
Trigger: GGAGTGAAGCAGGGCCACTTCTATGGAGAGACTGCAGCCGTCTATGTGGCAGTTGAAGAGAGGAAGGCAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS GCA 72 bp CAGGATCGACATGATTCTGAAGGTGATTGTCATGGGTaGAGGGAGCAGGCGGCGACACCGTCTAGGCTTCCT +
Preference number: 6 (lower is better)
Translates to: QDRHDSEGDCHG*REQAATPSRLP
Trigger: AGGAAGCCTAGACGGTGTCGCCGCCTGCTCCCTGCACCCATGACAATCACCTTCAGAATCATGTCGATCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS CAA 72 bp GCTGCCGGAATCCACAGATGCTCTGCTCCCATCGGCTaGATCTCTTGTATCTGCCACCGCCTTTTCCTCTGC +
Preference number: 6 (lower is better)
Translates to: AAGIHRCSAPIG*ISCICHRLFLC
Trigger: GCAGAGGAAAAGGCGGTGGCAGATACAAGAGATCAAGCCGATGGGAGCAGAGCATCTGTGGATTCCGGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS TCA 72 bp GACAGAGGTGGGTGGGTAGTAGCACGTGATGGACACTaGGTTACCTTCCACACTATTCACCTCCTCGGGACC +
Preference number: 6 (lower is better)
Translates to: DRGGWVVARDGH*VTFHTIHLLGT
Trigger: GGTCCCGAGGAGGTGAATAGTGTGGAAGGTAACTCAGTGTCCATCACGTGCTACTACCCACCCACCTCTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS TCA 72 bp CTGCCGGAATCCACAGATGCTCTGCTCCCATCGGCTTaGTCTCTTGTATCTGCCACCGCCTTTTCCTCTGCA +
Preference number: 6 (lower is better)
Translates to: LPESTDALLPSA*SLVSATAFSSA
Trigger: TGCAGAGGAAAAGGCGGTGGCAGATACAAGAGATCAAGCCGATGGGAGCAGAGCATCTGTGGATTCCGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS GCA 72 bp CTTGTTCCTCAGAGCTGCCGGAATCCACAGATGCTCTaGTCCCATCGGCTTGATCTCTTGTATCTGCCACCG +
Preference number: 6 (lower is better)
Translates to: LVPQSCRNPQML*SHRLDLLYLPP
Trigger: CGGTGGCAGATACAAGAGATCAAGCCGATGGGAGCAGAGCATCTGTGGATTCCGGCAGCTCTGAGGAACAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS CAA 90 bp AGCTGCCGGAATCCACAGATGCTCTGCTCCCATCGGCTTGATCTCTaGTATCTGCCACCGCCTTTTCCTCTGCAAAAAGCCTGGGATCCT +
Preference number: 6 (lower is better)
Translates to: SCRNPQMLCSHRLDL*YLPPPFPLQKAWDP
Trigger: AGGATCCCAGGCTTTTTGCAGAGGAAAAGGCGGTGGCAGATACAAGAGATCAAGCCGATGGGAGCAGAGCATCTGTGGATTCCGGCAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS CCA 72 bp TACCTTCCACACTATTCACCTCCTCGGGACCAAATATaGGACTCTTCGTGGAGATGGCTGGGAAGACCGCCA +
Preference number: 6 (lower is better)
Translates to: YLPHYSPPRDQI*DSSWRWLGRPP
Trigger: TGGCGGTCTTCCCAGCCATCTCCACGAAGAGTCCCATATTTGGTCCCGAGGAGGTGAATAGTGTGGAAGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS CAA 72 bp CAGAGATACTGCCCAGCATCGCTGAGCCTGAGTTGGTaGATGACAACGCTGAACAGTAACTGGCCAGTACCC +
Preference number: 6 (lower is better)
Translates to: QRYCPASLSLSW*MTTLNSNWPVP
Trigger: GGGTACTGGCCAGTTACTGTTCAGCGTTGTCATCAACCAACTCAGGCTCAGCGATGCTGGGCAGTATCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS CAA 72 bp TGGCTGGGCAGGGCCTGGCAGCCCGTGTTATTCCACTaGCACCAGTATTTCTCGTACGAGGAGAATTTGCAT +
Preference number: 6 (lower is better)
Translates to: WLGRAWQPVLFH*HQYFSYEENLH
Trigger: ATGCAAATTCTCCTCGTACGAGAAATACTGGTGCAAGTGGAATAACACGGGCTGCCAGGCCCTGCCCAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS CAA 90 bp TTCCTCAGAGCTGCCGGAATCCACAGATGCTCTGCTCCCATCGGCTaGATCTCTTGTATCTGCCACCGCCTTTTCCTCTGCAAAAAGCCT +
Preference number: 6 (lower is better)
Translates to: FLRAAGIHRCSAPIG*ISCICHRLFLCKKP
Trigger: AGGCTTTTTGCAGAGGAAAAGGCGGTGGCAGATACAAGAGATCAAGCCGATGGGAGCAGAGCATCTGTGGATTCCGGCAGCTCTGAGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS GCA 72 bp AGATGCTCTGCTCCCATCGGCTTGATCTCTTGTATCTaGCACCGCCTTTTCCTCTGCAAAAAGCCTGGGATC +
Preference number: 6 (lower is better)
Translates to: RCSAPIGLISCI*HRLFLCKKPGI
Trigger: GATCCCAGGCTTTTTGCAGAGGAAAAGGCGGTGGCAGATACAAGAGATCAAGCCGATGGGAGCAGAGCATCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS CCA 72 bp TGGCAGAGATACTGCCCAGCATCGCTGAGCCTGAGTTaGTTGATGACAACGCTGAACAGTAACTGGCCAGTA +
Preference number: 6 (lower is better)
Translates to: WQRYCPASLSLS*LMTTLNSNWPV
Trigger: TACTGGCCAGTTACTGTTCAGCGTTGTCATCAACCAACTCAGGCTCAGCGATGCTGGGCAGTATCTCTGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS TCA 72 bp CAGTATTTCTCGTACGAGGAGAATTTGCATGGAAAGTaGCAGGGGACCTTGAGAGTCTCTCCCAGCACAGCC +
Preference number: 6 (lower is better)
Translates to: QYFSYEENLHGK*QGTLRVSPSTA
Trigger: GGCTGTGCTGGGAGAGACTCTCAAGGTCCCCTGTCACTTTCCATGCAAATTCTCCTCGTACGAGAAATACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS GCA 72 bp TTACTATTGGAATCATCCCCAGCCTGGCAGAGATACTaGCCAGCATCGCTGAGCCTGAGTTGGTTGATGACA +
Preference number: 6 (lower is better)
Translates to: LLLESSPAWQRY*PASLSLSWLMT
Trigger: TGTCATCAACCAACTCAGGCTCAGCGATGCTGGGCAGTATCTCTGCCAGGCTGGGGATGATTCCAATAGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS CAA 72 bp AATCCACAGATGCTCTGCTCCCATCGGCTTGATCTCTaGTATCTGCCACCGCCTTTTCCTCTGCAAAAAGCC +
Preference number: 6 (lower is better)
Translates to: NPQMLCSHRLDL*YLPPPFPLQKA
Trigger: GGCTTTTTGCAGAGGAAAAGGCGGTGGCAGATACAAGAGATCAAGCCGATGGGAGCAGAGCATCTGTGGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS TCA 72 bp CAAACTCTTCTTTTCCTCCGAGGGATGTCTCCTGAGTaGTCGAAGAGGCTCCCATGTTGTCATTGGCTCCAA +
Preference number: 6 (lower is better)
Translates to: QTLLFLRGMSPE*SKRLPCCHWLQ
Trigger: TTGGAGCCAATGACAACATGGGAGCCTCTTCGATCACTCAGGAGACATCCCTCGGAGGAAAAGAAGAGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356495.5
ENST00000487208.1
CDS TCA 72 bp GCAACAAACTCTTCTTTTCCTCCGAGGGATGTCTCCTaGGTGATCGAAGAGGCTCCCATGTTGTCATTGGCT +
Preference number: 6 (lower is better)
Translates to: ATNSSFPPRDVS*VIEEAPMLSLA
Trigger: AGCCAATGACAACATGGGAGCCTCTTCGATCACTCAGGAGACATCCCTCGGAGGAAAAGAAGAGTTTGTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356495.5
ENST00000487208.1
CDS CCA 72 bp GCATTCTTCTTATTACTATTGGAATCATCCCCAGCCTaGCAGAGATACTGCCCAGCATCGCTGAGCCTGAGT +
Preference number: 6 (lower is better)
Translates to: AFFLLLLESSPA*QRYCPASLSLS
Trigger: ACTCAGGCTCAGCGATGCTGGGCAGTATCTCTGCCAGGCTGGGGATGATTCCAATAGTAATAAGAAGAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS CCA 72 bp CTTGCACCAGTATTTCTCGTACGAGGAGAATTTGCATaGAAAGTGACAGGGGACCTTGAGAGTCTCTCCCAG +
Preference number: 6 (lower is better)
Translates to: LAPVFLVRGEFA*KVTGDLESLSQ
Trigger: CTGGGAGAGACTCTCAAGGTCCCCTGTCACTTTCCATGCAAATTCTCCTCGTACGAGAAATACTGGTGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS CAA 90 bp CAGCACAGGGTACAGGCCTATCTGCTTGTACAAGGACTTCCTCTTTaGAGCATTCTCAGTCTTGAAAGGGCAGTTGATGGTCACCGTTCT +
Preference number: 6 (lower is better)
Translates to: QHRVQAYLLVQGLPL*SILSLERAVDGHRS
Trigger: AGAACGGTGACCATCAACTGCCCTTTCAAGACTGAGAATGCTCAAAAGAGGAAGTCCTTGTACAAGCAGATAGGCCTGTACCCTGTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356495.5
ENST00000491503.1
CDS CAA 90 bp ATCTCGGCTTCCTCCTTGGATGACCTTTTTGCCTTCTTGGGTTCTTaGGTCTCTGTGGTGCTCTCAGTGGTGGCAACAAACTCTTCTTTT +
Preference number: 6 (lower is better)
Translates to: ISASSLDDLFAFLGS*VSVVLSVVATNSSF
Trigger: AAAAGAAGAGTTTGTTGCCACCACTGAGAGCACCACAGAGACCAAAGAACCCAAGAAGGCAAAAAGGTCATCCAAGGAGGAAGCCGAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS TCA 72 bp CTGTATAGTTGGGATTTACATAACCACTGGAGTCGATaGCCAGCACAGGGTACAGGCCTATCTGCTTGTACA +
Preference number: 6 (lower is better)
Translates to: LYSWDLHNHWSR*PAQGTGLSACT
Trigger: TGTACAAGCAGATAGGCCTGTACCCTGTGCTGGTCATCGACTCCAGTGGTTATGTAAATCCCAACTATACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356495.5
ENST00000491503.1
CDS CCA 72 bp TTAGCACTTGGAGGTCAGCATTCTTCTTATTACTATTaGAATCATCCCCAGCCTGGCAGAGATACTGCCCAG +
Preference number: 6 (lower is better)
Translates to: LALGGQHSSYYY*NHPQPGRDTAQ
Trigger: CTGGGCAGTATCTCTGCCAGGCTGGGGATGATTCCAATAGTAATAAGAAGAATGCTGACCTCCAAGTGCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356495.5
CDS CCA 72 bp TCACCCTTTTTGCCTTCTTGGGTTCTTTGGTCTCTGTaGTGCTCTCAGTGGTGGCAACAAACTCTTCTTTTC +
Preference number: 6 (lower is better)
Translates to: SPFLPSWVLWSL*CSQWWQQTLLF
Trigger: GAAAAGAAGAGTTTGTTGCCACCACTGAGAGCACCACAGAGACCAAAGAACCCAAGAAGGCAAAAAGGGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487208.1