RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PIGQ (Homo sapiens)

Ensembl gene IDs: ENSG00000007541

Ensembl transcript IDs: ENST00000026218.9, ENST00000293874.2, ENST00000321878.10, ENST00000409527.6, ENST00000420990.6, ENST00000422307.6, ENST00000439574.1, ENST00000443147.5, ENST00000470411.2, ENST00000476438.1, ENST00000480424.6, ENST00000537901.1, ENST00000540241.1, ENST00000544860.1, ENST00000635205.1, ENST00000635909.1, ENST00000635935.1, ENST00000636005.1, ENST00000636657.1, ENST00000637468.1, ENST00000638143.1, ENST00000638152.1

Found 1228 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCAAATGGGTCCCGAGGCTCGCCTGGCCAGCTCCGCGAGGATGCTaGCCTCCACGCCCTCCGACTGCCAGTGGCTCAGCCGCACGGGGC +
Preference number: 1 (lower is better)
Translates to: GKWVPRLAWPAPRGC*PPRPPTASGSAARG
Trigger: GCCCCGTGCGGCTGAGCCACTGGCAGTCGGAGGGCGTGGAGGCCAGCATCCTCGCGGAGCTGGCCAGGCGAGCCTCGGGACCCATTTGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636657.1
3UTR GCA 90 bp GCAGGCAAATGGGTCCCGAGGCTCGCCTGGCCAGCTCCGCGAGGATaGTGGCCTCCACGCCCTCCGACTGCCAGTGGCTCAGCCGCACGG +
Preference number: 1 (lower is better)
Translates to: AGKWVPRLAWPAPRG*WPPRPPTASGSAAR
Trigger: CCGTGCGGCTGAGCCACTGGCAGTCGGAGGGCGTGGAGGCCAGCATCCTCGCGGAGCTGGCCAGGCGAGCCTCGGGACCCATTTGCCTGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636657.1
3UTR CCA 90 bp CGGACTCGGGCTCACAGGGAACACCCGCACCCAGACCGTGCCGTCTaGCAGGCACTTTCGGCCTCAGTGCCACGGCCCCCTCCCCAGGCC +
Preference number: 1 (lower is better)
Translates to: RTRAHREHPHPDRAV*QALSASVPRPPPQA
Trigger: GGCCTGGGGAGGGGGCCGTGGCACTGAGGCCGAAAGTGCCTGCCAGACGGCACGGTCTGGGTGCGGGTGTTCCCTGTGAGCCCGAGTCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
3UTR GCA 90 bp CGCCTGGCCAGCTCCGCGAGGATGCTGGCCTCCACGCCCTCCGACTaGCAGTGGCTCAGCCGCACGGGGCCCTCATCAAAGCGGTCACTG +
Preference number: 1 (lower is better)
Translates to: RLASSARMLASTPSD*QWLSRTGPSSKRSL
Trigger: CAGTGACCGCTTTGATGAGGGCCCCGTGCGGCTGAGCCACTGGCAGTCGGAGGGCGTGGAGGCCAGCATCCTCGCGGAGCTGGCCAGGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636657.1
3UTR CCA 90 bp CGCAGGACCTGCTGCTACGGGGCACCGTGGACGAATAGGTACGGCTaGGTCAGTGGGCGGGCCCTTGACACTGAGGCTGCTCCCGCCCCC +
Preference number: 1 (lower is better)
Translates to: RRTCCYGAPWTNRYG*VSGRALDTEAAPAP
Trigger: GGGGGCGGGAGCAGCCTCAGTGTCAAGGGCCCGCCCACTGACCCAGCCGTACCTATTCGTCCACGGTGCCCCGTAGCAGCAGGTCCTGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
3UTR CCA 90 bp ACAGCAGGCTGGCCAACAGCAGGCAAATGGGTCCCGAGGCTCGCCTaGCCAGCTCCGCGAGGATGCTGGCCTCCACGCCCTCCGACTGCC +
Preference number: 1 (lower is better)
Translates to: TAGWPTAGKWVPRLA*PAPRGCWPPRPPTA
Trigger: GGCAGTCGGAGGGCGTGGAGGCCAGCATCCTCGCGGAGCTGGCCAGGCGAGCCTCGGGACCCATTTGCCTGCTGTTGGCCAGCCTGCTGT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636657.1
3UTR GCA 90 bp GCCCCCAGAGGCCTGGCCTGGCCACAAGCAGGCCCAGTGCACACCTaGAGCCCACACAAGACCCACCCAGTCAGGCCTCAAGGAGGCCTC +
Preference number: 1 (lower is better)
Translates to: APRGLAWPQAGPVHT*SPHKTHPVRPQGGL
Trigger: GAGGCCTCCTTGAGGCCTGACTGGGTGGGTCTTGTGTGGGCTGCAGGTGTGCACTGGGCCTGCTTGTGGCCAGGCCAGGCCTCTGGGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
3UTR CCA 90 bp ACAGGAACGAGGGCGTCGGCCAGATGCCCGATGCGGCTTCTCCCGTaGAGCCAGGACAGCAGCATGAGGCCCAGGGCCACGTCCAGCAGC +
Preference number: 1 (lower is better)
Translates to: TGTRASARCPMRLLP*SQDSSMRPRATSSS
Trigger: GCTGCTGGACGTGGCCCTGGGCCTCATGCTGCTGTCCTGGCTCCACGGGAGAAGCCGCATCGGGCATCTGGCCGACGCCCTCGTTCCTGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000470411.2
ENST00000635909.1
ENST00000636657.1
3UTR TCA 90 bp GGGCAGTGCTCTGGACACCTGGGGTTGCTGTGCTCGCCACCATGGTaGCCGCAGCAGGTGGGAAGCGGGTCCCAAGGCAGGCAGTGCCAG +
Preference number: 1 (lower is better)
Translates to: GQCSGHLGLLCSPPW*PQQVGSGSQGRQCQ
Trigger: CTGGCACTGCCTGCCTTGGGACCCGCTTCCCACCTGCTGCGGTCACCATGGTGGCGAGCACAGCAACCCCAGGTGTCCAGAGCACTGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321878.10
ENST00000635205.1
ENST00000635909.1
ENST00000636657.1
3UTR TCA 90 bp CCAGATGCCCGATGCGGCTTCTCCCGTGGAGCCAGGACAGCAGCATaGGGCCCAGGGCCACGTCCAGCAGCACAGAGGCCACCGTGTTGG +
Preference number: 1 (lower is better)
Translates to: PDARCGFSRGARTAA*GPGPRPAAQRPPCW
Trigger: CCAACACGGTGGCCTCTGTGCTGCTGGACGTGGCCCTGGGCCTCATGCTGCTGTCCTGGCTCCACGGGAGAAGCCGCATCGGGCATCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000470411.2
ENST00000635909.1
ENST00000636657.1
3UTR GCA 90 bp TCCTCGGCCACGTGGTCAGCCACAGGAACGAGGGCGTCGGCCAGATaGCCGATGCGGCTTCTCCCGTGGAGCCAGGACAGCAGCATGAGG +
Preference number: 1 (lower is better)
Translates to: SSATWSATGTRASAR*PMRLLPWSQDSSMR
Trigger: CCTCATGCTGCTGTCCTGGCTCCACGGGAGAAGCCGCATCGGGCATCTGGCCGACGCCCTCGTTCCTGTGGCTGACCACGTGGCCGAGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635909.1
ENST00000636657.1
3UTR CCA 90 bp AGGGCAACGCTGATCTCAGGGACCACAAGGGAGATACCAGGACGCTaGGCCCACAGGGAGAGGCGGGCTCCCCAGAGCCTCAGCCCGGCT +
Preference number: 1 (lower is better)
Translates to: RATLISGTTREIPGR*AHRERRAPQSLSPA
Trigger: AGCCGGGCTGAGGCTCTGGGGAGCCCGCCTCTCCCTGTGGGCCCAGCGTCCTGGTATCTCCCTTGTGGTCCCTGAGATCAGCGTTGCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470411.2
3UTR GCA 90 bp GCAGGTGGGAAGCGGGTCCCAAGGCAGGCAGTGCCAGTGATGGAGTaGGGCCAGCCTGGCTGGCCACCCCCACATCTGCTCACTCCCAAT +
Preference number: 1 (lower is better)
Translates to: AGGKRVPRQAVPVME*GQPGWPPPHLLTPN
Trigger: ATTGGGAGTGAGCAGATGTGGGGGTGGCCAGCCAGGCTGGCCGCACTCCATCACTGGCACTGCCTGCCTTGGGACCCGCTTCCCACCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000321878.10
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
3UTR GCA 90 bp CCCAGTCCACTCACGTCAGCCACAGGAACGAGGGCGTCGGCCAGATaGCCGATGCGGCTTCTCCCGTGGAGCCAGGACAGCAGCATGAGG +
Preference number: 1 (lower is better)
Translates to: PSPLTSATGTRASAR*PMRLLPWSQDSSMR
Trigger: CCTCATGCTGCTGTCCTGGCTCCACGGGAGAAGCCGCATCGGGCATCTGGCCGACGCCCTCGTTCCTGTGGCTGACGTGAGTGGACTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470411.2
3UTR CCA 90 bp CGTCCACAAAGCACAGGACATGCGCCAGCTGAGCTGGTGCCACCCTaGCAGAGCAGATGGCTGGCTGTGGCCGTGTGGTGGTGCCAGGCG +
Preference number: 1 (lower is better)
Translates to: RPQSTGHAPAELVPP*QSRWLAVAVWWCQA
Trigger: CGCCTGGCACCACCACACGGCCACAGCCAGCCATCTGCTCTGCCAGGGTGGCACCAGCTCAGCTGGCGCATGTCCTGTGCTTTGTGGACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000321878.10
ENST00000540241.1
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
3UTR CCA 90 bp GGAGGGCCGTGTCTCCAGAGCATGGAGAAGGTAGAACTGGCTTTGTaGGGCGGTGGCTCTGGCCCGGGAAGGCTCTGCTGCCCAGGAGGG +
Preference number: 1 (lower is better)
Translates to: GGPCLQSMEKVELAL*GGGSGPGRLCCPGG
Trigger: CCCTCCTGGGCAGCAGAGCCTTCCCGGGCCAGAGCCACCGCCCCACAAAGCCAGTTCTACCTTCTCCATGCTCTGGAGACACGGCCCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470411.2
3UTR CCA 90 bp CCCACCCAGTCAGGCCTCAAGGAGGCCTCCACAGAGGCCCGAGGGTaGGCCAAAGAGTCAGGTACCACCCCCAGCAGGAAGACAAGCTCC +
Preference number: 1 (lower is better)
Translates to: PTQSGLKEASTEARG*AKESGTTPSRKTSS
Trigger: GGAGCTTGTCTTCCTGCTGGGGGTGGTACCTGACTCTTTGGCCCACCCTCGGGCCTCTGTGGAGGCCTCCTTGAGGCCTGACTGGGTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
3UTR CCA 90 bp CCCAGTGAGTACAGCGGCAGGGAGTTGATGAGGTCCACGAGCAGATaGATCAGGCCCTGCACGGCGACCACCAGGAGCCGGAGCAGGGTG +
Preference number: 1 (lower is better)
Translates to: PSEYSGRELMRSTSR*IRPCTATTRSRSRV
Trigger: CACCCTGCTCCGGCTCCTGGTGGTCGCCGTGCAGGGCCTGATCCATCTGCTCGTGGACCTCATCAACTCCCTGCCGCTGTACTCACTGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635909.1
ENST00000636657.1
3UTR CCA 90 bp CCCAGTGAGTACAGCGGCAGGGAGTTGATGAGGTCCACGAGCAGATaGATCAGGCCCTGCACGGCGACCACCAGGAGCCGGAGCTGGTCC +
Preference number: 1 (lower is better)
Translates to: PSEYSGRELMRSTSR*IRPCTATTRSRSWS
Trigger: GGACCAGCTCCGGCTCCTGGTGGTCGCCGTGCAGGGCCTGATCCATCTGCTCGTGGACCTCATCAACTCCCTGCCGCTGTACTCACTGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637468.1
3UTR TCA 90 bp GTGCGGCCAGCCTGGCTGGCCACCCCCACATCTGCTCACTCCCAATaGCCTCCAAGCCCAAGGTGTGATAGCAGGGCCTGCCGTGTTCAG +
Preference number: 1 (lower is better)
Translates to: VRPAWLATPTSAHSQ*PPSPRCDSRACRVQ
Trigger: CTGAACACGGCAGGCCCTGCTATCACACCTTGGGCTTGGAGGTCATTGGGAGTGAGCAGATGTGGGGGTGGCCAGCCAGGCTGGCCGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000321878.10
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
3UTR TCA 90 bp CACGCCAGCCGCCAGCCTGTAGGGCCGGCAGAGCCGAAGACCCAGTaGGTACAGCGGCAGGGAGTTGATGAGGTCCACGAGCAGATGGAT +
Preference number: 1 (lower is better)
Translates to: HASRQPVGPAEPKTQ*VQRQGVDEVHEQMD
Trigger: ATCCATCTGCTCGTGGACCTCATCAACTCCCTGCCGCTGTACTCACTGGGTCTTCGGCTCTGCCGGCCCTACAGGCTGGCGGCTGGCGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000635909.1
ENST00000636657.1
ENST00000637468.1
3UTR CCA 90 bp GTCCCAAGGCAGGCAGTGCCAGTGATGGAGTGCGGCCAGCCTGGCTaGCCACCCCCACATCTGCTCACTCCCAATGACCTCCAAGCCCAA +
Preference number: 1 (lower is better)
Translates to: VPRQAVPVMECGQPG*PPPHLLTPNDLQAQ
Trigger: TTGGGCTTGGAGGTCATTGGGAGTGAGCAGATGTGGGGGTGGCCAGCCAGGCTGGCCGCACTCCATCACTGGCACTGCCTGCCTTGGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000321878.10
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
3UTR CCA 90 bp AAGGGAGACAGATTTGGCCGCAGGACCTGCTGCTACGGGGCACCGTaGACGAATAGGTACGGCTGGGTCAGTGGGCGGGCCCTTGACACT +
Preference number: 1 (lower is better)
Translates to: KGDRFGRRTCCYGAP*TNRYGWVSGRALDT
Trigger: AGTGTCAAGGGCCCGCCCACTGACCCAGCCGTACCTATTCGTCCACGGTGCCCCGTAGCAGCAGGTCCTGCGGCCAAATCTGTCTCCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
3UTR GCA 90 bp GCCCTTGACACTGAGGCTGCTCCCGCCCCCACAGCAGCCTGGCGATaGTCACAGCCTGCTGATGGTTTCTTCACAAAGCGACCTCTCCAG +
Preference number: 1 (lower is better)
Translates to: ALDTEAAPAPTAAWR*SQPADGFFTKRPLQ
Trigger: CTGGAGAGGTCGCTTTGTGAAGAAACCATCAGCAGGCTGTGAGCATCGCCAGGCTGCTGTGGGGGCGGGAGCAGCCTCAGTGTCAAGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
3UTR GCA 90 bp TCCGCCTTCCGTGTACTGAAGATTAGCGTGAGGTGCTCCAGCCGGTaGCGGAGCTGTTCGCACGTGGAGAGTTTGCTCCCGAGGAAGGAC +
Preference number: 1 (lower is better)
Translates to: SAFRVLKISVRCSSR*RSCSHVESLLPRKD
Trigger: GTCCTTCCTCGGGAGCAAACTCTCCACGTGCGAACAGCTCCGGCACCGGCTGGAGCACCTCACGCTAATCTTCAGTACACGGAAGGCGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636657.1
3UTR GCA 90 bp TGGGCAGGGTTCTCCGCCTTCCGTGTACTGAAGATTAGCGTGAGGTaGTCCAGCCGGTGCCGGAGCTGTTCGCACGTGGAGAGTTTGCTC +
Preference number: 1 (lower is better)
Translates to: WAGFSAFRVLKISVR*SSRCRSCSHVESLL
Trigger: GAGCAAACTCTCCACGTGCGAACAGCTCCGGCACCGGCTGGAGCACCTCACGCTAATCTTCAGTACACGGAAGGCGGAGAACCCTGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636657.1
3UTR GCA 90 bp GGGGCACAGACCATGCAGGGAAGGTGGGAGATGGGAGACAAGCTGTaGCTCTGGCTCTCAGCACAGGAGTTACAGAATCAGCACAGGGGC +
Preference number: 1 (lower is better)
Translates to: GAQTMQGRWEMGDKL*LWLSAQELQNQHRG
Trigger: GCCCCTGTGCTGATTCTGTAACTCCTGTGCTGAGAGCCAGAGGCACAGCTTGTCTCCCATCTCCCACCTTCCCTGCATGGTCTGTGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
3UTR TCA 90 bp CTGGCGCAGAACGTTCCACTTCTTCCCCCGGAACAGACGCCACAGTaGGGACAGGCCATGGATCTTCAGGCAGTACAGCCTGGCTCCATA +
Preference number: 1 (lower is better)
Translates to: LAQNVPLLPPEQTPQ*GQAMDLQAVQPGSI
Trigger: TATGGAGCCAGGCTGTACTGCCTGAAGATCCATGGCCTGTCCTCACTGTGGCGTCTGTTCCGGGGGAAGAAGTGGAACGTTCTGCGCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635909.1
ENST00000636657.1
3UTR TCA 90 bp CTGGCGCAGAACGTTCCACTTCTTCCCCCGGAACAGACGCCACAGTaGGGACAGGCCATGGATCTTCAGGCAGTACAGCTGATCCACAGG +
Preference number: 1 (lower is better)
Translates to: LAQNVPLLPPEQTPQ*GQAMDLQAVQLIHR
Trigger: CCTGTGGATCAGCTGTACTGCCTGAAGATCCATGGCCTGTCCTCACTGTGGCGTCTGTTCCGGGGGAAGAAGTGGAACGTTCTGCGCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638143.1
3UTR CCA 90 bp CAGACCATGCAGGGAAGGTGGGAGATGGGAGACAAGCTGTGCCTCTaGCTCTCAGCACAGGAGTTACAGAATCAGCACAGGGGCAGGGCA +
Preference number: 1 (lower is better)
Translates to: QTMQGRWEMGDKLCL*LSAQELQNQHRGRA
Trigger: TGCCCTGCCCCTGTGCTGATTCTGTAACTCCTGTGCTGAGAGCCAGAGGCACAGCTTGTCTCCCATCTCCCACCTTCCCTGCATGGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
3UTR-3UTR GCA 90 bp GGGGCCTGCCGGCCTCGTGCCGGAGGACACGGAACTTCACGCCAGCCGCCAGCCTCCACGCCCTCCGACTaGCAGTGGCTCAGCCGCACG +
Preference number: 2 (lower is better)
Translates to: GACRPRAGGHGTSRQPPASTPSD*QWLSRT
Trigger: CGTGCGGCTGAGCCACTGGCAGTCGGAGGGCGTGGA...GGCTGGCGGCTGGCGTGAAGTTCCGTGTCCTCCGGCACGAGGCCGGCAGGCCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636657.1
3UTR-3UTR TCA 90 bp CGTGCCGTCTGGCAGGCACTTTCGGCCTCAGTGCCACGGCCCCCTCCCCAGGCCGCCAGGACAGCAGCATaGGGCCCAGGGCCACGTCCA +
Preference number: 2 (lower is better)
Translates to: RAVWQALSASVPRPPPQAARTAA*GPGPRP
Trigger: TGGACGTGGCCCTGGGCCTCATGCTGCTGTCCTGGC...GGCCTGGGGAGGGGGCCGTGGCACTGAGGCCGAAAGTGCCTGCCAGACGGCACG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635909.1
ENST00000636657.1
3UTR-3UTR CCA 90 bp GGGGCCTGCCGGCCTCGTGCCGGAGGACACGGAACTTCACGCCAGCCGCCAGCCGAGCTGGTGCCACCCTaGCAGAGCAGATGGCTGGCT +
Preference number: 2 (lower is better)
Translates to: GACRPRAGGHGTSRQPPAELVPP*QSRWLA
Trigger: AGCCAGCCATCTGCTCTGCCAGGGTGGCACCAGCTC...GGCTGGCGGCTGGCGTGAAGTTCCGTGTCCTCCGGCACGAGGCCGGCAGGCCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
3UTR-3UTR CCA 90 bp GGAGGGGCCTGCCGGCCTCGTGCCGGAGGACACGGAACTTCACGCCAGCCGCCAGGTGACCGCAGCAGGTaGGAAGCGGGTCCCAAGGCA +
Preference number: 2 (lower is better)
Translates to: GGACRPRAGGHGTSRQPPGDRSR*EAGPKA
Trigger: TGCCTTGGGACCCGCTTCCCACCTGCTGCGGTCACC...TGGCGGCTGGCGTGAAGTTCCGTGTCCTCCGGCACGAGGCCGGCAGGCCCCTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
3UTR-3UTR GCA 90 bp TCCTCCCACCCACAGCGCGTCATCCCCTCACCAGCCGGCACCTGCAGGCTCCCCTTTGGCCGCAGGACCTaGTGCTACGGGGCACCGTGG +
Preference number: 2 (lower is better)
Translates to: SSHPQRVIPSPAGTCRLPFGRRT*CYGAPW
Trigger: CCACGGTGCCCCGTAGCAGCAGGTCCTGCGGCCAAA...GGGGAGCCTGCAGGTGCCGGCTGGTGAGGGGATGACGCGCTGTGGGTGGGAGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
3UTR-3UTR GCA 90 bp CGCACCCAGACCGTGCCGTCTGGCAGGCACTTTCGGCCTCAGTGCCACGGCCCCCCCGCACCCAGACCGTaGCGTCTGGCAGGCACTTTC +
Preference number: 2 (lower is better)
Translates to: RTQTVPSGRHFRPQCHGPPAPRP*RLAGTF
Trigger: GAAAGTGCCTGCCAGACGGCACGGTCTGGGTGCGGG...GGGGCCGTGGCACTGAGGCCGAAAGTGCCTGCCAGACGGCACGGTCTGGGTGCG
70% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
3UTR-3UTR CCA 90 bp CGCACCCAGACCGTGCCGTCTGGCAGGCACTTTCGGCCTCAGTGCCACGGCCCCCTGGGGCTGCTGTGGTaGACGGACCCTCTGGACCTG +
Preference number: 2 (lower is better)
Translates to: RTQTVPSGRHFRPQCHGPLGLLW*TDPLDL
Trigger: CAGGTCCAGAGGGTCCGTCCACCACAGCAGCCCCAG...GGGGCCGTGGCACTGAGGCCGAAAGTGCCTGCCAGACGGCACGGTCTGGGTGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
3UTR-3UTR CCA 90 bp GGCCGTGTGGTGGTGCCAGGCGAGCCAGCAGTTCCCTCAGTCCTGCTTGTCCCCGTCCCGAGGCTCGCCTaGCCAGCTCCGCGAGGATGC +
Preference number: 2 (lower is better)
Translates to: GRVVVPGEPAVPSVLLVPVPRLA*PAPRGC
Trigger: GCATCCTCGCGGAGCTGGCCAGGCGAGCCTCGGGAC...GGGGACAAGCAGGACTGAGGGAACTGCTGGCTCGCCTGGCACCACCACACGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636657.1
3UTR CAA 90 bp GGGCACCGTGGACGAATAGGTACGGCTGGGTCAGTGGGCGGGCCCTaGACACTGAGGCTGCTCCCGCCCCCACAGCAGCCTGGCGATGCT +
Preference number: 2 (lower is better)
Translates to: GHRGRIGTAGSVGGP*TLRLLPPPQQPGDA
Trigger: AGCATCGCCAGGCTGCTGTGGGGGCGGGAGCAGCCTCAGTGTCAAGGGCCCGCCCACTGACCCAGCCGTACCTATTCGTCCACGGTGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
3UTR-3UTR TCA 90 bp GCGGCCCAGCACCTGGTCCAGTGCACGGTTCATCTTGAGCCCGGCGGGAGCACCTGCAGGCTCCCCTCCTaGAGCGGACTCGGGCTCACA +
Preference number: 2 (lower is better)
Translates to: AAQHLVQCTVHLEPGGSTCRLPS*SGLGLT
Trigger: TGTGAGCCCGAGTCCGCTTCAGGAGGGGAGCCTGCA...GGTGCTCCCGCCGGGCTCAAGATGAACCGTGCACTGGACCAGGTGCTGGGCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635909.1
ENST00000636657.1
3UTR-3UTR TCA 90 bp TCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGAGGACACGGAACTTCACGCGGAGCCGGAGCAGGGTaGACACCAGGTAGTACAGGG +
Preference number: 2 (lower is better)
Translates to: SGGGGACRPRAGGHGTSRGAGAG*TPGSTG
Trigger: CCCTGTACTACCTGGTGTTCACCCTGCTCCGGCTCC...GCGTGAAGTTCCGTGTCCTCCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635909.1
ENST00000636657.1
3UTR-3UTR GCA 90 bp CACAGGGAACACCCGCACCCAGACCGTGCCGTCTGGCAGGCACTTTCGGCCTCAGGCCGCAGGACCTGCTaGTACGGGGCACCGTGGACG +
Preference number: 2 (lower is better)
Translates to: HREHPHPDRAVWQALSASGRRTC*YGAPWT
Trigger: CGTCCACGGTGCCCCGTAGCAGCAGGTCCTGCGGCC...TGAGGCCGAAAGTGCCTGCCAGACGGCACGGTCTGGGTGCGGGTGTTCCCTGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
3UTR-3UTR GCA 90 bp GGTTTATCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGAGGACACCCCTCCACCTGGGGCTaGTGTGGTGGACGGACCCTC +
Preference number: 2 (lower is better)
Translates to: GLSASGGGGACRPRAGGHPSTWG*CGGRTL
Trigger: GAGGGTCCGTCCACCACAGCAGCCCCAGGTGGAGGG...GTGTCCTCCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGATAAACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000635205.1
ENST00000635909.1
ENST00000636657.1
3UTR-3UTR CCA 90 bp CGTGCCGTCTGGCAGGCACTTTCGGCCTCAGTGCCACGGCCCCCTCCCCAGGCCACGAATAGGTACGGCTaGGTCAGTGGGCGGGCCCTT +
Preference number: 2 (lower is better)
Translates to: RAVWQALSASVPRPPPQATNRYG*VSGRAL
Trigger: AAGGGCCCGCCCACTGACCCAGCCGTACCTATTCGT...GGCCTGGGGAGGGGGCCGTGGCACTGAGGCCGAAAGTGCCTGCCAGACGGCACG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
3UTR-3UTR CCA 90 bp GAAGCGGACTCGGGCTCACAGGGAACACCCGCACCCAGACCGTGCCGTCTGGCAGCTGTGGCCGTGTGGTaGTGCCAGGCGAGCCAGCAG +
Preference number: 2 (lower is better)
Translates to: EADSGSQGTPAPRPCRLAAVAVW*CQASQQ
Trigger: CTGCTGGCTCGCCTGGCACCACCACACGGCCACAGC...TGCCAGACGGCACGGTCTGGGTGCGGGTGTTCCCTGTGAGCCCGAGTCCGCTTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
3UTR-3UTR CCA 90 bp GCCACGTGGTCAGCCACAGGAACGAGGGCGTCGGCCAGATGCCCGATGCGGCTTCTGGCTGTGGCCGTGTaGTGGTGCCAGGCGAGCCAG +
Preference number: 2 (lower is better)
Translates to: ATWSATGTRASARCPMRLLAVAV*WCQASQ
Trigger: CTGGCTCGCCTGGCACCACCACACGGCCACAGCCAG...AAGCCGCATCGGGCATCTGGCCGACGCCCTCGTTCCTGTGGCTGACCACGTGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635909.1
ENST00000636657.1
3UTR-3UTR CCA 90 bp GCAGTGGGTTTATCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGACTGGCTGTGGCCGTGTaGTGGTGCCAGGCGAGCCAG +
Preference number: 2 (lower is better)
Translates to: AVGLSASGGGGACRPRAGLAVAV*WCQASQ
Trigger: CTGGCTCGCCTGGCACCACCACACGGCCACAGCCAG...TCCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGATAAACCCACTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443147.5
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
3UTR-3UTR CCA 90 bp CAGGCAGTCCTGGTGCTGCTGAGATGGGCGCTGCCTCCTCCCACCCACAGCGCGCCCTGGCAGAGCAGATaGCTGGCTGTGGCCGTGTGG +
Preference number: 2 (lower is better)
Translates to: QAVLVLLRWALPPPTHSAPWQSR*LAVAVW
Trigger: CCACACGGCCACAGCCAGCCATCTGCTCTGCCAGGG...CGCGCTGTGGGTGGGAGGAGGCAGCGCCCATCTCAGCAGCACCAGGACTGCCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
3UTR-3UTR CCA 90 bp TCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGAGGACACGGAACTCCCTGGCAGAGCAGATaGCTGGCTGTGGCCGTGTGG +
Preference number: 2 (lower is better)
Translates to: SASGGGGACRPRAGGHGTPWQSR*LAVAVW
Trigger: CCACACGGCCACAGCCAGCCATCTGCTCTGCCAGGG...AGTTCCGTGTCCTCCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
3UTR-3UTR CCA 90 bp GCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGAGGACACGGAACTTCACCCTGGCAGAGCAGATaGCTGGCTGTGGCCGTGTGG +
Preference number: 2 (lower is better)
Translates to: ASGGGGACRPRAGGHGTSPWQSR*LAVAVW
Trigger: CCACACGGCCACAGCCAGCCATCTGCTCTGCCAGGG...TGAAGTTCCGTGTCCTCCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
3UTR-3UTR CCA 90 bp GGTTTATCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGAGGACACTGCGGCCAGCCTGGCTaGCCACCCCCACATCTGCTC +
Preference number: 2 (lower is better)
Translates to: GLSASGGGGACRPRAGGHCGQPG*PPPHLL
Trigger: GAGCAGATGTGGGGGTGGCCAGCCAGGCTGGCCGCA...GTGTCCTCCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGATAAACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
3UTR-3UTR CCA 90 bp CCTCCTGAAGCGGACTCGGGCTCACAGGGAACACCCGCACCCAGACCGTGCCGTCGCCCCAGGAGTGCTTaGGGTGGCAGCCACAGCTGG +
Preference number: 2 (lower is better)
Translates to: PPEADSGSQGTPAPRPCRRPRSA*GGSHSW
Trigger: CCAGCTGTGGCTGCCACCCCAAGCACTCCTGGGGCG...ACGGCACGGTCTGGGTGCGGGTGTTCCCTGTGAGCCCGAGTCCGCTTCAGGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635909.1
ENST00000636657.1
3UTR-3UTR TCA 90 bp GGGTTTATCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGAGGACAAGGACATGCGCCAGCTaGGCTGGTGCCACCCTGGCA +
Preference number: 2 (lower is better)
Translates to: GFICIRRRRGLPASCRRTRTCAS*AGATLA
Trigger: TGCCAGGGTGGCACCAGCTCAGCTGGCGCATGTCCT...TGTCCTCCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGATAAACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
3UTR-3UTR TCA 90 bp GGTGGTGCCAGGCGAGCCAGCAGTTCCCTCAGTCCTGCTTGTCCCCTCTCTGCCGGCAGGCAGTGCCAGTaGTGGAGTGCGGCCAGCCTG +
Preference number: 2 (lower is better)
Translates to: GGARRASSSLSPACPLSAGRQCQ*WSAASL
Trigger: CAGGCTGGCCGCACTCCATCACTGGCACTGCCTGCC...GGCAGAGAGGGGACAAGCAGGACTGAGGGAACTGCTGGCTCGCCTGGCACCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
3UTR-3UTR TCA 90 bp GAGTGCGGCCAGCCTGGCTGGCCACCCCCACATCTGCTCACTCCCAATGACCTCGGCAGGCAGTGCCAGTaGTGGAGTGCGGCCAGCCTG +
Preference number: 2 (lower is better)
Translates to: ECGQPGWPPPHLLTPNDLGRQCQ*WSAASL
Trigger: CAGGCTGGCCGCACTCCATCACTGGCACTGCCTGCC...GAGGTCATTGGGAGTGAGCAGATGTGGGGGTGGCCAGCCAGGCTGGCCGCACTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000321878.10
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
3UTR-3UTR GCA 90 bp CGGCCTCGTGCCGGAGGACACGGAACTTCACGCCAGCCGCCAGCCTGTAGGGCCGGCCACAGAGGTGTCTaGACAGCAGGGCTTCCTCCT +
Preference number: 2 (lower is better)
Translates to: RPRAGGHGTSRQPPACRAGHRGV*TAGLPP
Trigger: AGGAGGAAGCCCTGCTGTGCAGACACCTCTGTGGCC...GGCCCTACAGGCTGGCGGCTGGCGTGAAGTTCCGTGTCCTCCGGCACGAGGCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635909.1
ENST00000636657.1
3UTR-3UTR GCA 90 bp AAGCGGGTCCCAAGGCAGGCAGTGCCAGTGATGGAGTGCGGCCAGCCTGGCTGGCCCGCACCCAGACCGTaGCGTCTGGCAGGCACTTTC +
Preference number: 2 (lower is better)
Translates to: KRVPRQAVPVMECGQPGWPAPRP*RLAGTF
Trigger: GAAAGTGCCTGCCAGACGGCACGGTCTGGGTGCGGG...CCAGCCAGGCTGGCCGCACTCCATCACTGGCACTGCCTGCCTTGGGACCCGCTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
3UTR-3UTR GCA 90 bp CGCAGCAGGTGGGAAGCGGGTCCCAAGGCAGGCAGTGCCAGTGATGGAGTGCGGGTGGCCGTGTGGTGGTaGCAGGCGAGCCAGCAGTTC +
Preference number: 2 (lower is better)
Translates to: RSRWEAGPKAGSASDGVRVAVWW*QASQQF
Trigger: GAACTGCTGGCTCGCCTGGCACCACCACACGGCCAC...CCGCACTCCATCACTGGCACTGCCTGCCTTGGGACCCGCTTCCCACCTGCTGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321878.10
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
3UTR-3UTR GCA 90 bp ACGGAACTTCACGCCAGCCGCCAGCCTGTAGGGCCGGCAGAGCCGAAGACCCAGGTGGCCGTGTGGTGGTaGCAGGCGAGCCAGCAGTTC +
Preference number: 2 (lower is better)
Translates to: TELHASRQPVGPAEPKTQVAVWW*QASQQF
Trigger: GAACTGCTGGCTCGCCTGGCACCACCACACGGCCAC...CTGGGTCTTCGGCTCTGCCGGCCCTACAGGCTGGCGGCTGGCGTGAAGTTCCGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
3UTR-3UTR GCA 90 bp GCCGTGTGGTGGTGCCAGGCGAGCCAGCAGTTCCCTCAGTCCTGCTTGTCCCCTAGGGCGCCCCAGGAGTaGTTGGGGTGGCAGCCACAG +
Preference number: 2 (lower is better)
Translates to: AVWWCQASQQFPQSCLSPRAPQE*LGWQPQ
Trigger: CTGTGGCTGCCACCCCAAGCACTCCTGGGGCGCCCT...AGGGGACAAGCAGGACTGAGGGAACTGCTGGCTCGCCTGGCACCACCACACGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000443147.5
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
3UTR-3UTR GCA 90 bp GTGGCCGTGTGGTGGTGCCAGGCGAGCCAGCAGTTCCCTCAGTCCTGCTTGTCCAGGGCGCCCCAGGAGTaGTTGGGGTGGCAGCCACAG +
Preference number: 2 (lower is better)
Translates to: VAVWWCQASQQFPQSCLSRAPQE*LGWQPQ
Trigger: CTGTGGCTGCCACCCCAAGCACTCCTGGGGCGCCCT...GGACAAGCAGGACTGAGGGAACTGCTGGCTCGCCTGGCACCACCACACGGCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000443147.5
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
3UTR-3UTR GCA 90 bp GCCGTGTGGTGGTGCCAGGCGAGCCAGCAGTTCCCTCAGTCCTGCTTGTCCCCTCCCCAAGGAACAGCTTaGGGCACAGGGCGCCCCAGG +
Preference number: 2 (lower is better)
Translates to: AVWWCQASQQFPQSCLSPPQGTA*GTGRPR
Trigger: CCTGGGGCGCCCTGTGCCGCAAGCTGTTCCTTGGGG...AGGGGACAAGCAGGACTGAGGGAACTGCTGGCTCGCCTGGCACCACCACACGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000443147.5
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
3UTR-3UTR GCA 90 bp AGAGCAGATGGCTGGCTGTGGCCGTGTGGTGGTGCCAGGCGAGCCAGCAGTTCCCCCCAAGGAACAGCTTaGGGCACAGGGCGCCCCAGG +
Preference number: 2 (lower is better)
Translates to: RADGWLWPCGGARRASSSPQGTA*GTGRPR
Trigger: CCTGGGGCGCCCTGTGCCGCAAGCTGTTCCTTGGGG...GGAACTGCTGGCTCGCCTGGCACCACCACACGGCCACAGCCAGCCATCTGCTCT
68% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000443147.5
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
3UTR-3UTR GCA 90 bp CGTGCCGTCTGGCAGGCACTTTCGGCCTCAGTGCCACGGCCCCCTCCCCAGGCCCAGTTCCCTCAGTCCTaGTTGTCCCCTCTCTGCCTC +
Preference number: 2 (lower is better)
Translates to: RAVWQALSASVPRPPPQAQFPQS*LSPLCL
Trigger: GAGGCAGAGAGGGGACAAGCAGGACTGAGGGAACTG...GGCCTGGGGAGGGGGCCGTGGCACTGAGGCCGAAAGTGCCTGCCAGACGGCACG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000635909.1
ENST00000636657.1
3UTR-3UTR GCA 90 bp TGGGGCAGTGCTCTGGACACCTGGGGTTGCTGTGCTCGCCACCATGGTGACCGCCGGCCAGATGCCCGATaGGGCTTCTCCCGTGGAGCC +
Preference number: 2 (lower is better)
Translates to: WGSALDTWGCCARHHGDRRPDAR*GFSRGA
Trigger: GGCTCCACGGGAGAAGCCGCATCGGGCATCTGGCCG...GCGGTCACCATGGTGGCGAGCACAGCAACCCCAGGTGTCCAGAGCACTGCCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635909.1
ENST00000636657.1
3UTR-3UTR CCA 90 bp CAGGCAGTCCTGGTGCTGCTGAGATGGGCGCTGCCTCCTCCCACCCACAGCGCGCCAGACCGTGCCGTCTaGCAGGCACTTTCGGCCTCA +
Preference number: 2 (lower is better)
Translates to: QAVLVLLRWALPPPTHSAPDRAV*QALSAS
Trigger: TGAGGCCGAAAGTGCCTGCCAGACGGCACGGTCTGG...CGCGCTGTGGGTGGGAGGAGGCAGCGCCCATCTCAGCAGCACCAGGACTGCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
3UTR-3UTR CCA 90 bp GGACCTGCTGCTACGGGGCACCGTGGACGAATAGGTACGGCTGGGTCAGTGGGCCGGCTTCCCCGGTGCTaGGTTGCCAGGGAGTCCCAG +
Preference number: 2 (lower is better)
Translates to: GPAATGHRGRIGTAGSVGRLPRC*VARESQ
Trigger: CTGGGACTCCCTGGCAACCCAGCACCGGGGAAGCCG...GCCCACTGACCCAGCCGTACCTATTCGTCCACGGTGCCCCGTAGCAGCAGGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
3UTR-3UTR CCA 90 bp GTGGCCGTGTGGTGGTGCCAGGCGAGCCAGCAGTTCCCTCAGTCCTGCTTGTCCGCTGTGGCCGTGTGGTaGTGCCAGGCGAGCCAGCAG +
Preference number: 2 (lower is better)
Translates to: VAVWWCQASQQFPQSCLSAVAVW*CQASQQ
Trigger: CTGCTGGCTCGCCTGGCACCACCACACGGCCACAGC...GGACAAGCAGGACTGAGGGAACTGCTGGCTCGCCTGGCACCACCACACGGCCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443147.5
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
3UTR-3UTR CCA 90 bp GATGGCTGGCTGTGGCCGTGTGGTGGTGCCAGGCGAGCCAGCAGTTCCCTCAGTGCTGTGGCCGTGTGGTaGTGCCAGGCGAGCCAGCAG +
Preference number: 2 (lower is better)
Translates to: DGWLWPCGGARRASSSLSAVAVW*CQASQQ
Trigger: CTGCTGGCTCGCCTGGCACCACCACACGGCCACAGC...ACTGAGGGAACTGCTGGCTCGCCTGGCACCACCACACGGCCACAGCCAGCCATC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443147.5
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
3UTR-3UTR CCA 90 bp TGGGGCAGTGCTCTGGACACCTGGGGTTGCTGTGCTCGCCACCATGGTGACCGCCTGGCTGTGGCCGTGTaGTGGTGCCAGGCGAGCCAG +
Preference number: 2 (lower is better)
Translates to: WGSALDTWGCCARHHGDRLAVAV*WCQASQ
Trigger: CTGGCTCGCCTGGCACCACCACACGGCCACAGCCAG...GCGGTCACCATGGTGGCGAGCACAGCAACCCCAGGTGTCCAGAGCACTGCCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321878.10
ENST00000635205.1
ENST00000635909.1
ENST00000636657.1
3UTR-3UTR CCA 90 bp GGCAGTGCTCTGGACACCTGGGGTTGCTGTGCTCGCCACCATGGTGACCGCAGCCTGGCTGTGGCCGTGTaGTGGTGCCAGGCGAGCCAG +
Preference number: 2 (lower is better)
Translates to: GSALDTWGCCARHHGDRSLAVAV*WCQASQ
Trigger: CTGGCTCGCCTGGCACCACCACACGGCCACAGCCAG...GCTGCGGTCACCATGGTGGCGAGCACAGCAACCCCAGGTGTCCAGAGCACTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321878.10
ENST00000635205.1
ENST00000635909.1
ENST00000636657.1
3UTR-3UTR CCA 90 bp AAGCGGGTCCCAAGGCAGGCAGTGCCAGTGATGGAGTGCGGCCAGCCTGGCTGGCTGGGGCTGCTGTGGTaGACGGACCCTCTGGACCTG +
Preference number: 2 (lower is better)
Translates to: KRVPRQAVPVMECGQPGWLGLLW*TDPLDL
Trigger: CAGGTCCAGAGGGTCCGTCCACCACAGCAGCCCCAG...CCAGCCAGGCTGGCCGCACTCCATCACTGGCACTGCCTGCCTTGGGACCCGCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321878.10
ENST00000635205.1
ENST00000635909.1
ENST00000636657.1
3UTR-3UTR CCA 90 bp GGACCTGCTGCTACGGGGCACCGTGGACGAATAGGTACGGCTGGGTCAGTGGGCGACCAGCCCTCCACCTaGGGCTGCTGTGGTGGACGG +
Preference number: 2 (lower is better)
Translates to: GPAATGHRGRIGTAGSVGDQPST*GCCGGR
Trigger: CCGTCCACCACAGCAGCCCCAGGTGGAGGGCTGGTC...GCCCACTGACCCAGCCGTACCTATTCGTCCACGGTGCCCCGTAGCAGCAGGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
3UTR-3UTR CCA 90 bp GGCCTGGCCACAAGCAGGCCCAGTGCACACCTGCAGCCCACACAAGACCCACCCGAGATACCAGGACGCTaGGCCCACAGGGAGAGGCGG +
Preference number: 2 (lower is better)
Translates to: GLATSRPSAHLQPTQDPPEIPGR*AHRERR
Trigger: CCGCCTCTCCCTGTGGGCCCAGCGTCCTGGTATCTC...GGGTGGGTCTTGTGTGGGCTGCAGGTGTGCACTGGGCCTGCTTGTGGCCAGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
3UTR-3UTR CCA 90 bp GATGGCTGGCTGTGGCCGTGTGGTGGTGCCAGGCGAGCCAGCAGTTCCCTCAGTCGCCCCAGGAGTGCTTaGGGTGGCAGCCACAGCTGG +
Preference number: 2 (lower is better)
Translates to: DGWLWPCGGARRASSSLSRPRSA*GGSHSW
Trigger: CCAGCTGTGGCTGCCACCCCAAGCACTCCTGGGGCG...ACTGAGGGAACTGCTGGCTCGCCTGGCACCACCACACGGCCACAGCCAGCCATC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443147.5
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
3UTR-3UTR CCA 90 bp GGTGGTGCCAGGCGAGCCAGCAGTTCCCTCAGTCCTGCTTGTCCCCTCTCTGCCCGCCCCAGGAGTGCTTaGGGTGGCAGCCACAGCTGG +
Preference number: 2 (lower is better)
Translates to: GGARRASSSLSPACPLSARPRSA*GGSHSW
Trigger: CCAGCTGTGGCTGCCACCCCAAGCACTCCTGGGGCG...GGCAGAGAGGGGACAAGCAGGACTGAGGGAACTGCTGGCTCGCCTGGCACCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000443147.5
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
3UTR-3UTR CCA 90 bp TCCACAGAGGCCCGAGGGTGGGCCAAAGAGTCAGGTACCACCCCCAGCAGGAAGGTGGGGCGGTGGCTCTaGCCCGGGAAGGCTCTGCTG +
Preference number: 2 (lower is better)
Translates to: STEARGWAKESGTTPSRKVGRWL*PGKALL
Trigger: CAGCAGAGCCTTCCCGGGCCAGAGCCACCGCCCCAC...CTTCCTGCTGGGGGTGGTACCTGACTCTTTGGCCCACCCTCGGGCCTCTGTGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470411.2
3UTR-3UTR CCA 90 bp GAACACCCGCACCCAGACCGTGCCGTCTGGCAGGCACTTTCGGCCTCAGTGCCAGCTCCGCGAGGATGCTaGCCTCCACGCCCTCCGACT +
Preference number: 2 (lower is better)
Translates to: EHPHPDRAVWQALSASVPAPRGC*PPRPPT
Trigger: AGTCGGAGGGCGTGGAGGCCAGCATCCTCGCGGAGC...TGGCACTGAGGCCGAAAGTGCCTGCCAGACGGCACGGTCTGGGTGCGGGTGTTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636657.1
3UTR-3UTR TCA 90 bp GGACCTGCTGCTACGGGGCACCGTGGACGAATAGGTACGGCTGGGTCAGTGGGCTGCAGGCTCCCCTCCTaGAGCGGACTCGGGCTCACA +
Preference number: 2 (lower is better)
Translates to: GPAATGHRGRIGTAGSVGCRLPS*SGLGLT
Trigger: TGTGAGCCCGAGTCCGCTTCAGGAGGGGAGCCTGCA...GCCCACTGACCCAGCCGTACCTATTCGTCCACGGTGCCCCGTAGCAGCAGGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
3UTR-3UTR TCA 90 bp GCTGTGGCCGTGTGGTGGTGCCAGGCGAGCCAGCAGTTCCCTCAGTCCTGCTTGAGGACATGCGCCAGCTaGGCTGGTGCCACCCTGGCA +
Preference number: 2 (lower is better)
Translates to: AVAVWWCQASQQFPQSCLRTCAS*AGATLA
Trigger: TGCCAGGGTGGCACCAGCTCAGCTGGCGCATGTCCT...CAAGCAGGACTGAGGGAACTGCTGGCTCGCCTGGCACCACCACACGGCCACAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
3UTR-3UTR TCA 90 bp GGACCTGCTGCTACGGGGCACCGTGGACGAATAGGTACGGCTGGGTCAGTGGGCAGGACATGCGCCAGCTaGGCTGGTGCCACCCTGGCA +
Preference number: 2 (lower is better)
Translates to: GPAATGHRGRIGTAGSVGRTCAS*AGATLA
Trigger: TGCCAGGGTGGCACCAGCTCAGCTGGCGCATGTCCT...GCCCACTGACCCAGCCGTACCTATTCGTCCACGGTGCCCCGTAGCAGCAGGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
3UTR-3UTR GCA 90 bp GCTGTGGCCGTGTGGTGGTGCCAGGCGAGCCAGCAGTTCCCTCAGTCCTGCTTGGTGGCCGTGTGGTGGTaGCAGGCGAGCCAGCAGTTC +
Preference number: 2 (lower is better)
Translates to: AVAVWWCQASQQFPQSCLVAVWW*QASQQF
Trigger: GAACTGCTGGCTCGCCTGGCACCACCACACGGCCAC...CAAGCAGGACTGAGGGAACTGCTGGCTCGCCTGGCACCACCACACGGCCACAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443147.5
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
3UTR-3UTR GCA 90 bp GATGGCTGGCTGTGGCCGTGTGGTGGTGCCAGGCGAGCCAGCAGTTCCCTCAGTGTGGCCGTGTGGTGGTaGCAGGCGAGCCAGCAGTTC +
Preference number: 2 (lower is better)
Translates to: DGWLWPCGGARRASSSLSVAVWW*QASQQF
Trigger: GAACTGCTGGCTCGCCTGGCACCACCACACGGCCAC...ACTGAGGGAACTGCTGGCTCGCCTGGCACCACCACACGGCCACAGCCAGCCATC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443147.5
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
3UTR-3UTR GCA 90 bp GCACCTGCAGGCTCCCCTCCTGAAGCGGACTCGGGCTCACAGGGAACACCCGCACGCCAGCTGAGCTGGTaGCACCCTGGCAGAGCAGAT +
Preference number: 2 (lower is better)
Translates to: APAGSPPEADSGSQGTPARQLSW*HPGRAD
Trigger: ATCTGCTCTGCCAGGGTGGCACCAGCTCAGCTGGCG...TGCGGGTGTTCCCTGTGAGCCCGAGTCCGCTTCAGGAGGGGAGCCTGCAGGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
3UTR-3UTR GCA 90 bp GGAGGGGCCTGCCGGCCTCGTGCCGGAGGACACGGAACTTCACGCCAGCCGCCATGTGATAGCAGGGCCTaGCGTGTTCAGGAGCACACA +
Preference number: 2 (lower is better)
Translates to: GGACRPRAGGHGTSRQPPCDSRA*RVQEHT
Trigger: TGTGTGCTCCTGAACACGGCAGGCCCTGCTATCACA...TGGCGGCTGGCGTGAAGTTCCGTGTCCTCCGGCACGAGGCCGGCAGGCCCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
3UTR-3UTR GCA 90 bp GGACCTGCTGCTACGGGGCACCGTGGACGAATAGGTACGGCTGGGTCAGTGGGCGTGCCAGTGATGGAGTaGGGCCAGCCTGGCTGGCCA +
Preference number: 2 (lower is better)
Translates to: GPAATGHRGRIGTAGSVGVPVME*GQPGWP
Trigger: TGGCCAGCCAGGCTGGCCGCACTCCATCACTGGCAC...GCCCACTGACCCAGCCGTACCTATTCGTCCACGGTGCCCCGTAGCAGCAGGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
3UTR-3UTR GCA 90 bp TGGGGCAGTGCTCTGGACACCTGGGGTTGCTGTGCTCGCCACCATGGTGACCGCGTGCCAGTGATGGAGTaGGGCCAGCCTGGCTGGCCA +
Preference number: 2 (lower is better)
Translates to: WGSALDTWGCCARHHGDRVPVME*GQPGWP
Trigger: TGGCCAGCCAGGCTGGCCGCACTCCATCACTGGCAC...GCGGTCACCATGGTGGCGAGCACAGCAACCCCAGGTGTCCAGAGCACTGCCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321878.10
ENST00000635205.1
ENST00000635909.1
ENST00000636657.1
3UTR-3UTR GCA 90 bp GCAGTGCTCTGGACACCTGGGGTTGCTGTGCTCGCCACCATGGTGACCGCAGCACCCTCCACCTGGGGCTaGTGTGGTGGACGGACCCTC +
Preference number: 2 (lower is better)
Translates to: AVLWTPGVAVLATMVTAAPSTWG*CGGRTL
Trigger: GAGGGTCCGTCCACCACAGCAGCCCCAGGTGGAGGG...TGCTGCGGTCACCATGGTGGCGAGCACAGCAACCCCAGGTGTCCAGAGCACTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321878.10
ENST00000635205.1
ENST00000635909.1
ENST00000636657.1
3UTR-3UTR GCA 90 bp CGCACCCAGACCGTGCCGTCTGGCAGGCACTTTCGGCCTCAGTGCCACGGCCCCACGGGGGTCAGCGACTaGTTCAATCCCCCAGATGCA +
Preference number: 2 (lower is better)
Translates to: RTQTVPSGRHFRPQCHGPTGVSD*FNPPDA
Trigger: TGCATCTGGGGGATTGAAGCAGTCGCTGACCCCCGT...GGGGCCGTGGCACTGAGGCCGAAAGTGCCTGCCAGACGGCACGGTCTGGGTGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
3UTR-3UTR GCA 90 bp GGCCTGGCCACAAGCAGGCCCAGTGCACACCTGCAGCCCACACAAGACCCACCCAAGTCCCAGCTGGGCTaGACATGGGCCTCCCTGGAC +
Preference number: 2 (lower is better)
Translates to: GLATSRPSAHLQPTQDPPKSQLG*TWASLD
Trigger: GTCCAGGGAGGCCCATGTGCAGCCCAGCTGGGACTT...GGGTGGGTCTTGTGTGGGCTGCAGGTGTGCACTGGGCCTGCTTGTGGCCAGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
3UTR-3UTR GCA 90 bp CGCGCTGGCGCAGAACGTTCCACTTCTTCCCCCGGAACAGACGCCACAGTGAGGCCCCAAGGAACAGCTTaGGGCACAGGGCGCCCCAGG +
Preference number: 2 (lower is better)
Translates to: RAGAERSTSSPGTDATVRPQGTA*GTGRPR
Trigger: CCTGGGGCGCCCTGTGCCGCAAGCTGTTCCTTGGGG...CCTCACTGTGGCGTCTGTTCCGGGGGAAGAAGTGGAACGTTCTGCGCCAGCGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000635909.1
ENST00000636657.1
3UTR-3UTR GCA 90 bp GTGGTGCCAGGCGAGCCAGCAGTTCCCTCAGTCCTGCTTGTCCCCTCTCTGCCTCGGCCAGATGCCCGATaGGGCTTCTCCCGTGGAGCC +
Preference number: 2 (lower is better)
Translates to: VVPGEPAVPSVLLVPSLPRPDAR*GFSRGA
Trigger: GGCTCCACGGGAGAAGCCGCATCGGGCATCTGGCCG...AGGCAGAGAGGGGACAAGCAGGACTGAGGGAACTGCTGGCTCGCCTGGCACCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635909.1
ENST00000636657.1
3UTR-3UTR CCA 90 bp CGGCCCAGCACCTGGTCCAGTGCACGGTTCATCTTGAGCCCGGCGGGAGCACCCACGAATAGGTACGGCTaGGTCAGTGGGCGGGCCCTT +
Preference number: 2 (lower is better)
Translates to: RPSTWSSARFILSPAGAPTNRYG*VSGRAL
Trigger: AAGGGCCCGCCCACTGACCCAGCCGTACCTATTCGT...GGGTGCTCCCGCCGGGCTCAAGATGAACCGTGCACTGGACCAGGTGCTGGGCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635909.1
ENST00000636657.1
3UTR-3UTR CCA 90 bp GCGGCCCAGCACCTGGTCCAGTGCACGGTTCATCTTGAGCCCGGCGGGAGCACCTGCTACGGGGCACCGTaGACGAATAGGTACGGCTGG +
Preference number: 2 (lower is better)
Translates to: AAQHLVQCTVHLEPGGSTCYGAP*TNRYGW
Trigger: CCAGCCGTACCTATTCGTCCACGGTGCCCCGTAGCA...GGTGCTCCCGCCGGGCTCAAGATGAACCGTGCACTGGACCAGGTGCTGGGCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635909.1
ENST00000636657.1
3UTR-3UTR CCA 90 bp GCAGGCCGAGAGGCCCACGTGCCAAAGGATGTGCTCCACGAAGGGGGACATGAGGCTGTGGCCGTGTGGTaGTGCCAGGCGAGCCAGCAG +
Preference number: 2 (lower is better)
Translates to: AGREAHVPKDVLHEGGHEAVAVW*CQASQQ
Trigger: CTGCTGGCTCGCCTGGCACCACCACACGGCCACAGC...CTCATGTCCCCCTTCGTGGAGCACATCCTTTGGCACGTGGGCCTCTCGGCCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635909.1
ENST00000636657.1
3UTR-3UTR CCA 90 bp GCTGGGGAGGCGGTAGGTGTGCACCACGCGGCTGTAGGGCAGTGGGTTTATCTGGCTGTGGCCGTGTGGTaGTGCCAGGCGAGCCAGCAG +
Preference number: 2 (lower is better)
Translates to: AGEAVGVHHAAVGQWVYLAVAVW*CQASQQ
Trigger: CTGCTGGCTCGCCTGGCACCACCACACGGCCACAGC...CAGATAAACCCACTGCCCTACAGCCGCGTGGTGCACACCTACCGCCTCCCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443147.5
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
3UTR-3UTR CCA 90 bp GAACACCCGCACCCAGACCGTGCCGTCTGGCAGGCACTTTCGGCCTCAGTGCCACCCTGGCAGAGCAGATaGCTGGCTGTGGCCGTGTGG +
Preference number: 2 (lower is better)
Translates to: EHPHPDRAVWQALSASVPPWQSR*LAVAVW
Trigger: CCACACGGCCACAGCCAGCCATCTGCTCTGCCAGGG...TGGCACTGAGGCCGAAAGTGCCTGCCAGACGGCACGGTCTGGGTGCGGGTGTTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
3UTR-3UTR CCA 90 bp GCTGTGGCCGTGTGGTGGTGCCAGGCGAGCCAGCAGTTCCCTCAGTCCTGCTTGGGTGACCGCAGCAGGTaGGAAGCGGGTCCCAAGGCA +
Preference number: 2 (lower is better)
Translates to: AVAVWWCQASQQFPQSCLGDRSR*EAGPKA
Trigger: TGCCTTGGGACCCGCTTCCCACCTGCTGCGGTCACC...CAAGCAGGACTGAGGGAACTGCTGGCTCGCCTGGCACCACCACACGGCCACAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
3UTR-3UTR CCA 90 bp CACCCGCACCCAGACCGTGCCGTCTGGCAGGCACTTTCGGCCTCAGTGCCACGGTACACAGGGTGGGCATaGGGCAGTGCTCTGGACACC +
Preference number: 2 (lower is better)
Translates to: HPHPDRAVWQALSASVPRYTGWA*GSALDT
Trigger: GGTGTCCAGAGCACTGCCCCATGCCCACCCTGTGTA...CCGTGGCACTGAGGCCGAAAGTGCCTGCCAGACGGCACGGTCTGGGTGCGGGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
3UTR-3UTR CCA 90 bp GCAGGCTCCCCTCCTGAAGCGGACTCGGGCTCACAGGGAACACCCGCACCCAGAGAGGGTGCCTGGGACTaGGGGGTTCATCCTGGCAAG +
Preference number: 2 (lower is better)
Translates to: AGSPPEADSGSQGTPAPREGAWD*GVHPGK
Trigger: CTTGCCAGGATGAACCCCCCAGTCCCAGGCACCCTC...TCTGGGTGCGGGTGTTCCCTGTGAGCCCGAGTCCGCTTCAGGAGGGGAGCCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
3UTR-3UTR CCA 90 bp CCTCCACAGAGGCCCGAGGGTGGGCCAAAGAGTCAGGTACCACCCCCAGCAGGAGGGGCTGCACCCGGCTaGAAACGGGGCACAGACCAT +
Preference number: 2 (lower is better)
Translates to: PPQRPEGGPKSQVPPPAGGAAPG*KRGTDH
Trigger: ATGGTCTGTGCCCCGTTTCCAGCCGGGTGCAGCCCC...TCCTGCTGGGGGTGGTACCTGACTCTTTGGCCCACCCTCGGGCCTCTGTGGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
3UTR-3UTR CCA 90 bp GTGGTGCCAGGCGAGCCAGCAGTTCCCTCAGTCCTGCTTGTCCCCTCTCTGCCTCGCCCCAGGAGTGCTTaGGGTGGCAGCCACAGCTGG +
Preference number: 2 (lower is better)
Translates to: VVPGEPAVPSVLLVPSLPRPRSA*GGSHSW
Trigger: CCAGCTGTGGCTGCCACCCCAAGCACTCCTGGGGCG...AGGCAGAGAGGGGACAAGCAGGACTGAGGGAACTGCTGGCTCGCCTGGCACCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000443147.5
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
3UTR-3UTR CCA 90 bp GGCAGTCCTGGTGCTGCTGAGATGGGCGCTGCCTCCTCCCACCCACAGCGCGTCATGCGGCTTCTCCCGTaGAGCCAGGACAGCAGCATG +
Preference number: 2 (lower is better)
Translates to: GSPGAAEMGAASSHPQRVMRLLP*SQDSSM
Trigger: CATGCTGCTGTCCTGGCTCCACGGGAGAAGCCGCAT...GACGCGCTGTGGGTGGGAGGAGGCAGCGCCCATCTCAGCAGCACCAGGACTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635909.1
ENST00000636657.1
3UTR-3UTR CCA 90 bp GCAGCAGGTGGGAAGCGGGTCCCAAGGCAGGCAGTGCCAGTGATGGAGTGCGGCCCAACAGCAGGCAAATaGGTCCCGAGGCTCGCCTGG +
Preference number: 2 (lower is better)
Translates to: AAGGKRVPRQAVPVMECGPTAGK*VPRLAW
Trigger: CCAGGCGAGCCTCGGGACCCATTTGCCTGCTGTTGG...GCCGCACTCCATCACTGGCACTGCCTGCCTTGGGACCCGCTTCCCACCTGCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636657.1
3UTR CAA 90 bp AGGGGAGGGCCGTGTCTCCAGAGCATGGAGAAGGTAGAACTGGCTTaGTGGGGCGGTGGCTCTGGCCCGGGAAGGCTCTGCTGCCCAGGA +
Preference number: 2 (lower is better)
Translates to: RGGPCLQSMEKVELA*WGGGSGPGRLCCPG
Trigger: TCCTGGGCAGCAGAGCCTTCCCGGGCCAGAGCCACCGCCCCACAAAGCCAGTTCTACCTTCTCCATGCTCTGGAGACACGGCCCTCCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470411.2
3UTR-3UTR TCA 90 bp GTCCTGGTGCTGCTGAGATGGGCGCTGCCTCCTCCCACCCACAGCGCGTCATCCGCCTCCAGGGGTAGATaGGCTCCCCAAGGAACAGCT +
Preference number: 2 (lower is better)
Translates to: VLVLLRWALPPPTHSASSASRGR*APQGTA
Trigger: AGCTGTTCCTTGGGGAGCTCATCTACCCCTGGAGGC...GGATGACGCGCTGTGGGTGGGAGGAGGCAGCGCCCATCTCAGCAGCACCAGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635909.1
ENST00000636657.1
3UTR-3UTR TCA 90 bp AAGCGGGTCCCAAGGCAGGCAGTGCCAGTGATGGAGTGCGGCCAGCCTGGCTGGGCCTCCAGGGGTAGATaGGCTCCCCAAGGAACAGCT +
Preference number: 2 (lower is better)
Translates to: KRVPRQAVPVMECGQPGWASRGR*APQGTA
Trigger: AGCTGTTCCTTGGGGAGCTCATCTACCCCTGGAGGC...CCAGCCAGGCTGGCCGCACTCCATCACTGGCACTGCCTGCCTTGGGACCCGCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
3UTR-3UTR GCA 90 bp CCTGGTGCTGCTGAGATGGGCGCTGCCTCCTCCCACCCACAGCGCGTCATCCCCACAGCAGCCTGGCGATaGTCACAGCCTGCTGATGGT +
Preference number: 2 (lower is better)
Translates to: PGAAEMGAASSHPQRVIPTAAWR*SQPADG
Trigger: ACCATCAGCAGGCTGTGAGCATCGCCAGGCTGCTGT...GGGGATGACGCGCTGTGGGTGGGAGGAGGCAGCGCCCATCTCAGCAGCACCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
3UTR-3UTR GCA 90 bp GGGACGGGGGTCAGCGACTGCTTCAATCCCCCAGATGCAGGGTGCTGTTCGGCTTTTGGCCGCAGGACCTaGTGCTACGGGGCACCGTGG +
Preference number: 2 (lower is better)
Translates to: GTGVSDCFNPPDAGCCSAFGRRT*CYGAPW
Trigger: CCACGGTGCCCCGTAGCAGCAGGTCCTGCGGCCAAA...AGCCGAACAGCACCCTGCATCTGGGGGATTGAAGCAGTCGCTGACCCCCGTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
3UTR-3UTR GCA 90 bp CTGGAGCTCCTCGGCCACGTGGTCAGCCACAGGAACGAGGGCGTCGGCCAGATGCTGGACACCTGGGGTTaGTGTGCTCGCCACCATGGT +
Preference number: 2 (lower is better)
Translates to: LELLGHVVSHRNEGVGQMLDTWG*CARHHG
Trigger: ACCATGGTGGCGAGCACAGCAACCCCAGGTGTCCAG...CATCTGGCCGACGCCCTCGTTCCTGTGGCTGACCACGTGGCCGAGGAGCTCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635909.1
ENST00000636657.1
3UTR-3UTR GCA 90 bp GTCCTGGTGCTGCTGAGATGGGCGCTGCCTCCTCCCACCCACAGCGCGTCATCCAAGATTAGCGTGAGGTaGTCCAGCCGGTGCCGGAGC +
Preference number: 2 (lower is better)
Translates to: VLVLLRWALPPPTHSASSKISVR*SSRCRS
Trigger: GCTCCGGCACCGGCTGGAGCACCTCACGCTAATCTT...GGATGACGCGCTGTGGGTGGGAGGAGGCAGCGCCCATCTCAGCAGCACCAGGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636657.1
3UTR-3UTR GCA 90 bp CTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGAGGACACGGAACTTCAGCACCTGGTCCAGTaGACGGTTCATCTTGAGCCC +
Preference number: 2 (lower is better)
Translates to: LHQEAEGPAGLVPEDTELQHLVQ*TVHLEP
Trigger: GGGCTCAAGATGAACCGTGCACTGGACCAGGTGCTG...AAGTTCCGTGTCCTCCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635909.1
ENST00000636657.1
3UTR-3UTR CCA 90 bp CCTCCTGAAGCGGACTCGGGCTCACAGGGAACACCCGCACCCAGACCGTGCCGTACGAATAGGTACGGCTaGGTCAGTGGGCGGGCCCTT +
Preference number: 2 (lower is better)
Translates to: PPEADSGSQGTPAPRPCRTNRYG*VSGRAL
Trigger: AAGGGCCCGCCCACTGACCCAGCCGTACCTATTCGT...ACGGCACGGTCTGGGTGCGGGTGTTCCCTGTGAGCCCGAGTCCGCTTCAGGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
3UTR-3UTR CCA 90 bp GAAGCGGGTCCCAAGGCAGGCAGTGCCAGTGATGGAGTGCGGCCAGCCTGGCTGTGCTACGGGGCACCGTaGACGAATAGGTACGGCTGG +
Preference number: 2 (lower is better)
Translates to: EAGPKAGSASDGVRPAWLCYGAP*TNRYGW
Trigger: CCAGCCGTACCTATTCGTCCACGGTGCCCCGTAGCA...CAGCCAGGCTGGCCGCACTCCATCACTGGCACTGCCTGCCTTGGGACCCGCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
3UTR-3UTR CCA 90 bp GCCCAAGGTGTGATAGCAGGGCCTGCCGTGTTCAGGAGCACACAGCAGCGTCCACTGGCTGTGGCCGTGTaGTGGTGCCAGGCGAGCCAG +
Preference number: 2 (lower is better)
Translates to: AQGVIAGPAVFRSTQQRPLAVAV*WCQASQ
Trigger: CTGGCTCGCCTGGCACCACCACACGGCCACAGCCAG...TGGACGCTGCTGTGTGCTCCTGAACACGGCAGGCCCTGCTATCACACCTTGGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000321878.10
ENST00000540241.1
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
3UTR-3UTR CCA 90 bp CCAAGCCCAAGGTGTGATAGCAGGGCCTGCCGTGTTCAGGAGCACACAGCAGCGCTGGCTGTGGCCGTGTaGTGGTGCCAGGCGAGCCAG +
Preference number: 2 (lower is better)
Translates to: PSPRCDSRACRVQEHTAALAVAV*WCQASQ
Trigger: CTGGCTCGCCTGGCACCACCACACGGCCACAGCCAG...CGCTGCTGTGTGCTCCTGAACACGGCAGGCCCTGCTATCACACCTTGGGCTTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000321878.10
ENST00000540241.1
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
3UTR-3UTR CCA 90 bp GTGGTGCCAGGCGAGCCAGCAGTTCCCTCAGTCCTGCTTGTCCCCTCTCTGCCTCCCTGGCAGAGCAGATaGCTGGCTGTGGCCGTGTGG +
Preference number: 2 (lower is better)
Translates to: VVPGEPAVPSVLLVPSLPPWQSR*LAVAVW
Trigger: CCACACGGCCACAGCCAGCCATCTGCTCTGCCAGGG...AGGCAGAGAGGGGACAAGCAGGACTGAGGGAACTGCTGGCTCGCCTGGCACCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
3UTR-3UTR CCA 90 bp AGAGCAGATGGCTGGCTGTGGCCGTGTGGTGGTGCCAGGCGAGCCAGCAGTTCCGAGCTGGTGCCACCCTaGCAGAGCAGATGGCTGGCT +
Preference number: 2 (lower is better)
Translates to: RADGWLWPCGGARRASSSELVPP*QSRWLA
Trigger: AGCCAGCCATCTGCTCTGCCAGGGTGGCACCAGCTC...GGAACTGCTGGCTCGCCTGGCACCACCACACGGCCACAGCCAGCCATCTGCTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000321878.10
ENST00000540241.1
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
3UTR-3UTR CCA 90 bp GGGTTTATCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGAGGACATACACAGGGTGGGCATaGGGCAGTGCTCTGGACACC +
Preference number: 2 (lower is better)
Translates to: GFICIRRRRGLPASCRRTYTGWA*GSALDT
Trigger: GGTGTCCAGAGCACTGCCCCATGCCCACCCTGTGTA...TGTCCTCCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGATAAACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000635205.1
ENST00000635909.1
ENST00000636657.1
3UTR-3UTR CCA 90 bp GCAGTGCTCTGGACACCTGGGGTTGCTGTGCTCGCCACCATGGTGACCGCAGCACTGGGGCTGCTGTGGTaGACGGACCCTCTGGACCTG +
Preference number: 2 (lower is better)
Translates to: AVLWTPGVAVLATMVTAALGLLW*TDPLDL
Trigger: CAGGTCCAGAGGGTCCGTCCACCACAGCAGCCCCAG...TGCTGCGGTCACCATGGTGGCGAGCACAGCAACCCCAGGTGTCCAGAGCACTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321878.10
ENST00000635205.1
ENST00000635909.1
ENST00000636657.1
3UTR-3UTR CCA 90 bp GCATGGGGCAGTGCTCTGGACACCTGGGGTTGCTGTGCTCGCCACCATGGTGACCACCTGGGGCTGCTGTaGTGGACGGACCCTCTGGAC +
Preference number: 2 (lower is better)
Translates to: AWGSALDTWGCCARHHGDHLGLL*WTDPLD
Trigger: GTCCAGAGGGTCCGTCCACCACAGCAGCCCCAGGTG...GTCACCATGGTGGCGAGCACAGCAACCCCAGGTGTCCAGAGCACTGCCCCATGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000321878.10
ENST00000635205.1
ENST00000635909.1
ENST00000636657.1
3UTR-3UTR CCA 90 bp GTCCACTCACGTCAGCCACAGGAACGAGGGCGTCGGCCAGATGCCCGATGCGGCCAGAGGCCACCGTGTTaGCCTTCCTGGAAGGGAGGT +
Preference number: 2 (lower is better)
Translates to: VHSRQPQERGRRPDARCGQRPPC*PSWKGG
Trigger: ACCTCCCTTCCAGGAAGGCCAACACGGTGGCCTCTG...GCCGCATCGGGCATCTGGCCGACGCCCTCGTTCCTGTGGCTGACGTGAGTGGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470411.2
3UTR-3UTR CCA 90 bp GGTCTAGGACAAAGTAGGCCGGTGGCAGGTGCGGACGACCACAGGCAAAGCTGCGGCTTTGTGGGGCGGTaGCTCTGGCCCGGGAAGGCT +
Preference number: 2 (lower is better)
Translates to: GLGQSRPVAGADDHRQSCGFVGR*LWPGKA
Trigger: AGCCTTCCCGGGCCAGAGCCACCGCCCCACAAAGCC...GCAGCTTTGCCTGTGGTCGTCCGCACCTGCCACCGGCCTACTTTGTCCTAGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470411.2
3UTR-3UTR TCA 90 bp GGCTCCCCTCCTGAAGCGGACTCGGGCTCACAGGGAACACCCGCACCCAGACCGTCTGCTCACTCCCAATaGCCTCCAAGCCCAAGGTGT +
Preference number: 2 (lower is better)
Translates to: GSPPEADSGSQGTPAPRPSAHSQ*PPSPRC
Trigger: ACACCTTGGGCTTGGAGGTCATTGGGAGTGAGCAGA...CGGTCTGGGTGCGGGTGTTCCCTGTGAGCCCGAGTCCGCTTCAGGAGGGGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
3UTR-3UTR TCA 90 bp AGTCCTGGTGCTGCTGAGATGGGCGCTGCCTCCTCCCACCCACAGCGCGTCATCGCCTCCAGGGGTAGATaGGCTCCCCAAGGAACAGCT +
Preference number: 2 (lower is better)
Translates to: SPGAAEMGAASSHPQRVIASRGR*APQGTA
Trigger: AGCTGTTCCTTGGGGAGCTCATCTACCCCTGGAGGC...GATGACGCGCTGTGGGTGGGAGGAGGCAGCGCCCATCTCAGCAGCACCAGGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635909.1
ENST00000636657.1
3UTR-3UTR TCA 90 bp CCAGAGAGCCAGGAGGGCAACGCTGATCTCAGGGACCACAAGGGAGATACCAGGGCCAGGACAGCAGCATaGGGCCCAGGGCCACGTCCA +
Preference number: 2 (lower is better)
Translates to: PESQEGNADLRDHKGDTRARTAA*GPGPRP
Trigger: TGGACGTGGCCCTGGGCCTCATGCTGCTGTCCTGGC...CCTGGTATCTCCCTTGTGGTCCCTGAGATCAGCGTTGCCCTCCTGGCTCTCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470411.2
3UTR-3UTR TCA 90 bp GAACAGGAGTCCACGCGCTGGCGCAGAACGTTCCACTTCTTCCCCCGGAACAGAGCCAGGACAGCAGCATaGGGCCCAGGGCCACGTCCA +
Preference number: 2 (lower is better)
Translates to: EQESTRWRRTFHFFPRNRARTAA*GPGPRP
Trigger: TGGACGTGGCCCTGGGCCTCATGCTGCTGTCCTGGC...TCTGTTCCGGGGGAAGAAGTGGAACGTTCTGCGCCAGCGCGTGGACTCCTGTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635909.1
ENST00000636657.1
3UTR-3UTR GCA 90 bp GCAGCAGGTGGGAAGCGGGTCCCAAGGCAGGCAGTGCCAGTGATGGAGTGCGGCACAGCAGCCTGGCGATaGTCACAGCCTGCTGATGGT +
Preference number: 2 (lower is better)
Translates to: AAGGKRVPRQAVPVMECGTAAWR*SQPADG
Trigger: ACCATCAGCAGGCTGTGAGCATCGCCAGGCTGCTGT...GCCGCACTCCATCACTGGCACTGCCTGCCTTGGGACCCGCTTCCCACCTGCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
3UTR-3UTR GCA 90 bp GAAGCGGACTCGGGCTCACAGGGAACACCCGCACCCAGACCGTGCCGTCTGGCAACAGCAGCCTGGCGATaGTCACAGCCTGCTGATGGT +
Preference number: 2 (lower is better)
Translates to: EADSGSQGTPAPRPCRLATAAWR*SQPADG
Trigger: ACCATCAGCAGGCTGTGAGCATCGCCAGGCTGCTGT...TGCCAGACGGCACGGTCTGGGTGCGGGTGTTCCCTGTGAGCCCGAGTCCGCTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
3UTR-3UTR GCA 90 bp CCAAGCCCAAGGTGTGATAGCAGGGCCTGCCGTGTTCAGGAGCACACAGCAGCGGTGGCCGTGTGGTGGTaGCAGGCGAGCCAGCAGTTC +
Preference number: 2 (lower is better)
Translates to: PSPRCDSRACRVQEHTAAVAVWW*QASQQF
Trigger: GAACTGCTGGCTCGCCTGGCACCACCACACGGCCAC...CGCTGCTGTGTGCTCCTGAACACGGCAGGCCCTGCTATCACACCTTGGGCTTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000321878.10
ENST00000540241.1
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
3UTR-3UTR GCA 90 bp CACAGGGAACACCCGCACCCAGACCGTGCCGTCTGGCAGGCACTTTCGGCCTCAGGCCACCCCCACATCTaGTCACTCCCAATGACCTCC +
Preference number: 2 (lower is better)
Translates to: HREHPHPDRAVWQALSASGHPHI*SLPMTS
Trigger: GGAGGTCATTGGGAGTGAGCAGATGTGGGGGTGGCC...TGAGGCCGAAAGTGCCTGCCAGACGGCACGGTCTGGGTGCGGGTGTTCCCTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
3UTR-3UTR GCA 90 bp CCAGAGAGCCAGGAGGGCAACGCTGATCTCAGGGACCACAAGGGAGATACCAGGTGCAGAGGAGGGGGCTaGACCCGGCTGGAAACGGGG +
Preference number: 2 (lower is better)
Translates to: PESQEGNADLRDHKGDTRCRGGG*TRLETG
Trigger: CCCCGTTTCCAGCCGGGTGCAGCCCCCTCCTCTGCA...CCTGGTATCTCCCTTGTGGTCCCTGAGATCAGCGTTGCCCTCCTGGCTCTCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
3UTR-3UTR GCA 90 bp GGCTGGCTGTGGCCGTGTGGTGGTGCCAGGCGAGCCAGCAGTTCCCTCAGTCCTCAGTTCCCTCAGTCCTaGTTGTCCCCTCTCTGCCTC +
Preference number: 2 (lower is better)
Translates to: GWLWPCGGARRASSSLSPQFPQS*LSPLCL
Trigger: GAGGCAGAGAGGGGACAAGCAGGACTGAGGGAACTG...AGGACTGAGGGAACTGCTGGCTCGCCTGGCACCACCACACGGCCACAGCCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443147.5
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
3UTR-3UTR GCA 90 bp CCAGAGAGCCAGGAGGGCAACGCTGATCTCAGGGACCACAAGGGAGATACCAGGAGGGCGTCGGCCAGATaGCCGATGCGGCTTCTCCCG +
Preference number: 2 (lower is better)
Translates to: PESQEGNADLRDHKGDTRRASAR*PMRLLP
Trigger: CGGGAGAAGCCGCATCGGGCATCTGGCCGACGCCCT...CCTGGTATCTCCCTTGTGGTCCCTGAGATCAGCGTTGCCCTCCTGGCTCTCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470411.2
3UTR-3UTR CCA 90 bp CTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGAGGACACGGAACTTGAAGGGAGACAGATTTaGCCGCAGGACCTGCTGCTA +
Preference number: 2 (lower is better)
Translates to: LHQEAEGPAGLVPEDTELEGRQI*PQDLLL
Trigger: TAGCAGCAGGTCCTGCGGCCAAATCTGTCTCCCTTC...AAGTTCCGTGTCCTCCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635909.1
ENST00000636657.1
3UTR-3UTR CCA 90 bp AGTCCTGGTGCTGCTGAGATGGGCGCTGCCTCCTCCCACCCACAGCGCGTCATCGGCTTCCTCCTTCCCTaGGAGGCCCATGAAGGGAGA +
Preference number: 2 (lower is better)
Translates to: SPGAAEMGAASSHPQRVIGFLLP*EAHEGR
Trigger: TCTCCCTTCATGGGCCTCCCAGGGAAGGAGGAAGCC...GATGACGCGCTGTGGGTGGGAGGAGGCAGCGCCCATCTCAGCAGCACCAGGACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
3UTR-3UTR CCA 90 bp CTCACAGGGAACACCCGCACCCAGACCGTGCCGTCTGGCAGGCACTTTCGGCCTGGCTTCCTCCTTCCCTaGGAGGCCCATGAAGGGAGA +
Preference number: 2 (lower is better)
Translates to: LTGNTRTQTVPSGRHFRPGFLLP*EAHEGR
Trigger: TCTCCCTTCATGGGCCTCCCAGGGAAGGAGGAAGCC...AGGCCGAAAGTGCCTGCCAGACGGCACGGTCTGGGTGCGGGTGTTCCCTGTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
3UTR-3UTR CCA 90 bp GGAGCACACAGCAGCGTCCACAAAGCACAGGACATGCGCCAGCTGAGCTGGTGCCCCTGGCAGAGCAGATaGCTGGCTGTGGCCGTGTGG +
Preference number: 2 (lower is better)
Translates to: GAHSSVHKAQDMRQLSWCPWQSR*LAVAVW
Trigger: CCACACGGCCACAGCCAGCCATCTGCTCTGCCAGGG...GCACCAGCTCAGCTGGCGCATGTCCTGTGCTTTGTGGACGCTGCTGTGTGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000321878.10
ENST00000540241.1
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
3UTR-3UTR CCA 90 bp GGTCTAGGACAAAGTAGGCCGGTGGCAGGTGCGGACGACCACAGGCAAAGCTGCGCAGGAAGTCCCAGCTaGGCTGCACATGGGCCTCCC +
Preference number: 2 (lower is better)
Translates to: GLGQSRPVAGADDHRQSCAGSPS*AAHGPP
Trigger: GGGAGGCCCATGTGCAGCCCAGCTGGGACTTCCTGC...GCAGCTTTGCCTGTGGTCGTCCGCACCTGCCACCGGCCTACTTTGTCCTAGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
3UTR-3UTR CCA 90 bp CCTCCACAGAGGCCCGAGGGTGGGCCAAAGAGTCAGGTACCACCCCCAGCAGGAATGCGGCTTCTCCCGTaGAGCCAGGACAGCAGCATG +
Preference number: 2 (lower is better)
Translates to: PPQRPEGGPKSQVPPPAGMRLLP*SQDSSM
Trigger: CATGCTGCTGTCCTGGCTCCACGGGAGAAGCCGCAT...TCCTGCTGGGGGTGGTACCTGACTCTTTGGCCCACCCTCGGGCCTCTGTGGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470411.2
3UTR-3UTR CCA 90 bp GCTGTGGCCGTGTGGTGGTGCCAGGCGAGCCAGCAGTTCCCTCAGTCCTGCTTGATGCGGCTTCTCCCGTaGAGCCAGGACAGCAGCATG +
Preference number: 2 (lower is better)
Translates to: AVAVWWCQASQQFPQSCLMRLLP*SQDSSM
Trigger: CATGCTGCTGTCCTGGCTCCACGGGAGAAGCCGCAT...CAAGCAGGACTGAGGGAACTGCTGGCTCGCCTGGCACCACCACACGGCCACAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635909.1
ENST00000636657.1
3UTR-3UTR CCA 90 bp AGTCCTGGTGCTGCTGAGATGGGCGCTGCCTCCTCCCACCCACAGCGCGTCATCCCAGCGACAGCAGGCTaGCCAACAGCAGGCAAATGG +
Preference number: 2 (lower is better)
Translates to: SPGAAEMGAASSHPQRVIPATAG*PTAGKW
Trigger: CCATTTGCCTGCTGTTGGCCAGCCTGCTGTCGCTGG...GATGACGCGCTGTGGGTGGGAGGAGGCAGCGCCCATCTCAGCAGCACCAGGACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636657.1
3UTR-3UTR TCA 90 bp AGGTGTGATAGCAGGGCCTGCCGTGTTCAGGAGCACACAGCAGCGTCCACAAAGGGCAGGCAGTGCCAGTaGTGGAGTGCGGCCAGCCTG +
Preference number: 2 (lower is better)
Translates to: RCDSRACRVQEHTAASTKGRQCQ*WSAASL
Trigger: CAGGCTGGCCGCACTCCATCACTGGCACTGCCTGCC...CTTTGTGGACGCTGCTGTGTGCTCCTGAACACGGCAGGCCCTGCTATCACACCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321878.10
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
3UTR-3UTR TCA 90 bp GGTCTAGGACAAAGTAGGCCGGTGGCAGGTGCGGACGACCACAGGCAAAGCTGCCCAGGAGGGCAACGCTaGTCTCAGGGACCACAAGGG +
Preference number: 2 (lower is better)
Translates to: GLGQSRPVAGADDHRQSCPGGQR*SQGPQG
Trigger: CCCTTGTGGTCCCTGAGATCAGCGTTGCCCTCCTGG...GCAGCTTTGCCTGTGGTCGTCCGCACCTGCCACCGGCCTACTTTGTCCTAGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
3UTR-3UTR TCA 90 bp CACCCGGGACACCGGGCTCCACCCCAGTCCACTCACGTCAGCCACAGGAACGAGACAGGAAAGGTTTCATaGCCCTGGCTCTGCAGAGGG +
Preference number: 2 (lower is better)
Translates to: HPGHRAPPQSTHVSHRNETGKVS*PWLCRG
Trigger: CCCTCTGCAGAGCCAGGGTCATGAAACCTTTCCTGT...CTCGTTCCTGTGGCTGACGTGAGTGGACTGGGGTGGAGCCCGGTGTCCCGGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470411.2
3UTR-3UTR GCA 90 bp GCATGGGGCAGTGCTCTGGACACCTGGGGTTGCTGTGCTCGCCACCATGGTGACGGCCACAGAGGTGTCTaGACAGCAGGGCTTCCTCCT +
Preference number: 2 (lower is better)
Translates to: AWGSALDTWGCCARHHGDGHRGV*TAGLPP
Trigger: AGGAGGAAGCCCTGCTGTGCAGACACCTCTGTGGCC...GTCACCATGGTGGCGAGCACAGCAACCCCAGGTGTCCAGAGCACTGCCCCATGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
3UTR-3UTR GCA 90 bp CCAAGCCCAAGGTGTGATAGCAGGGCCTGCCGTGTTCAGGAGCACACAGCAGCGCGCCAGCTGAGCTGGTaGCACCCTGGCAGAGCAGAT +
Preference number: 2 (lower is better)
Translates to: PSPRCDSRACRVQEHTAARQLSW*HPGRAD
Trigger: ATCTGCTCTGCCAGGGTGGCACCAGCTCAGCTGGCG...CGCTGCTGTGTGCTCCTGAACACGGCAGGCCCTGCTATCACACCTTGGGCTTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000321878.10
ENST00000540241.1
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
3UTR-3UTR GCA 90 bp GAGCAGATGGCTGGCTGTGGCCGTGTGGTGGTGCCAGGCGAGCCAGCAGTTCCCTGTGATAGCAGGGCCTaGCGTGTTCAGGAGCACACA +
Preference number: 2 (lower is better)
Translates to: EQMAGCGRVVVPGEPAVPCDSRA*RVQEHT
Trigger: TGTGTGCTCCTGAACACGGCAGGCCCTGCTATCACA...GGGAACTGCTGGCTCGCCTGGCACCACCACACGGCCACAGCCAGCCATCTGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000321878.10
ENST00000540241.1
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
3UTR-3UTR GCA 90 bp GAAGCGGACTCGGGCTCACAGGGAACACCCGCACCCAGACCGTGCCGTCTGGCATGTGATAGCAGGGCCTaGCGTGTTCAGGAGCACACA +
Preference number: 2 (lower is better)
Translates to: EADSGSQGTPAPRPCRLACDSRA*RVQEHT
Trigger: TGTGTGCTCCTGAACACGGCAGGCCCTGCTATCACA...TGCCAGACGGCACGGTCTGGGTGCGGGTGTTCCCTGTGAGCCCGAGTCCGCTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
3UTR-3UTR GCA 90 bp GTGGTGCCAGGCGAGCCAGCAGTTCCCTCAGTCCTGCTTGTCCCCTCTCTGCCTGGCCACCCCCACATCTaGTCACTCCCAATGACCTCC +
Preference number: 2 (lower is better)
Translates to: VVPGEPAVPSVLLVPSLPGHPHI*SLPMTS
Trigger: GGAGGTCATTGGGAGTGAGCAGATGTGGGGGTGGCC...AGGCAGAGAGGGGACAAGCAGGACTGAGGGAACTGCTGGCTCGCCTGGCACCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
3UTR-3UTR GCA 90 bp AGCGACTGCTTCAATCCCCCAGATGCAGGGTGCTGTTCGGCTGAGGGAGCTAGACCCTCCACCTGGGGCTaGTGTGGTGGACGGACCCTC +
Preference number: 2 (lower is better)
Translates to: SDCFNPPDAGCCSAEGARPSTWG*CGGRTL
Trigger: GAGGGTCCGTCCACCACAGCAGCCCCAGGTGGAGGG...TCTAGCTCCCTCAGCCGAACAGCACCCTGCATCTGGGGGATTGAAGCAGTCGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
3UTR-3UTR GCA 90 bp GTTCAGGGGAGGGCCGTGTCTCCAGAGCATGGAGAAGGTAGAACTGGCTTTGTGCCGGGAAGGCTCTGCTaGCCAGGAGGGGTCCCCACG +
Preference number: 2 (lower is better)
Translates to: VQGRAVSPEHGEGRTGFVPGRLC*PGGVPT
Trigger: CGTGGGGACCCCTCCTGGGCAGCAGAGCCTTCCCGG...CACAAAGCCAGTTCTACCTTCTCCATGCTCTGGAGACACGGCCCTCCCCTGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000470411.2
3UTR-3UTR CCA 90 bp CCTCCTGAAGCGGACTCGGGCTCACAGGGAACACCCGCACCCAGACCGTGCCGTGAAGGGAGACAGATTTaGCCGCAGGACCTGCTGCTA +
Preference number: 2 (lower is better)
Translates to: PPEADSGSQGTPAPRPCREGRQI*PQDLLL
Trigger: TAGCAGCAGGTCCTGCGGCCAAATCTGTCTCCCTTC...ACGGCACGGTCTGGGTGCGGGTGTTCCCTGTGAGCCCGAGTCCGCTTCAGGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
3UTR-3UTR CCA 90 bp AGGTGTGATAGCAGGGCCTGCCGTGTTCAGGAGCACACAGCAGCGTCCACAAAGGCTGTGGCCGTGTGGTaGTGCCAGGCGAGCCAGCAG +
Preference number: 2 (lower is better)
Translates to: RCDSRACRVQEHTAASTKAVAVW*CQASQQ
Trigger: CTGCTGGCTCGCCTGGCACCACCACACGGCCACAGC...CTTTGTGGACGCTGCTGTGTGCTCCTGAACACGGCAGGCCCTGCTATCACACCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000321878.10
ENST00000540241.1
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
3UTR-3UTR CCA 90 bp CAAGGTGTGATAGCAGGGCCTGCCGTGTTCAGGAGCACACAGCAGCGTCCACAAGCTGTGGCCGTGTGGTaGTGCCAGGCGAGCCAGCAG +
Preference number: 2 (lower is better)
Translates to: QGVIAGPAVFRSTQQRPQAVAVW*CQASQQ
Trigger: CTGCTGGCTCGCCTGGCACCACCACACGGCCACAGC...TTGTGGACGCTGCTGTGTGCTCCTGAACACGGCAGGCCCTGCTATCACACCTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000321878.10
ENST00000540241.1
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
3UTR-3UTR CCA 90 bp CCAAGCCCAAGGTGTGATAGCAGGGCCTGCCGTGTTCAGGAGCACACAGCAGCGGAGCTGGTGCCACCCTaGCAGAGCAGATGGCTGGCT +
Preference number: 2 (lower is better)
Translates to: PSPRCDSRACRVQEHTAAELVPP*QSRWLA
Trigger: AGCCAGCCATCTGCTCTGCCAGGGTGGCACCAGCTC...CGCTGCTGTGTGCTCCTGAACACGGCAGGCCCTGCTATCACACCTTGGGCTTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000321878.10
ENST00000540241.1
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
3UTR-3UTR CCA 90 bp AGCGACTGCTTCAATCCCCCAGATGCAGGGTGCTGTTCGGCTGAGGGAGCTAGATGCGGCCAGCCTGGCTaGCCACCCCCACATCTGCTC +
Preference number: 2 (lower is better)
Translates to: SDCFNPPDAGCCSAEGARCGQPG*PPPHLL
Trigger: GAGCAGATGTGGGGGTGGCCAGCCAGGCTGGCCGCA...TCTAGCTCCCTCAGCCGAACAGCACCCTGCATCTGGGGGATTGAAGCAGTCGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
3UTR-3UTR CCA 90 bp CTCCAGGGAACATCCGCAAATAAACCCCGTGTGGTTCAGGGAGTGAGGGCCCGGCTGGGGCTGCTGTGGTaGACGGACCCTCTGGACCTG +
Preference number: 2 (lower is better)
Translates to: LQGTSANKPRVVQGVRARLGLLW*TDPLDL
Trigger: CAGGTCCAGAGGGTCCGTCCACCACAGCAGCCCCAG...CCGGGCCCTCACTCCCTGAACCACACGGGGTTTATTTGCGGATGTTCCCTGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
3UTR-3UTR CCA 90 bp CTGGCCACAAGCAGGCCCAGTGCACACCTGCAGCCCACACAAGACCCACCCAGTACAGAGGCCCGAGGGTaGGCCAAAGAGTCAGGTACC +
Preference number: 2 (lower is better)
Translates to: LATSRPSAHLQPTQDPPSTEARG*AKESGT
Trigger: GGTACCTGACTCTTTGGCCCACCCTCGGGCCTCTGT...ACTGGGTGGGTCTTGTGTGGGCTGCAGGTGTGCACTGGGCCTGCTTGTGGCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
3UTR-3UTR CCA 90 bp AGGAAGAGCAGGATGGTGAAGAGCAGAGTCCCGATGAACAGCTGGTCCAGGTCACCCTCCGACTGCCAGTaGCTCAGCCGCACGGGGCCC +
Preference number: 2 (lower is better)
Translates to: RKSRMVKSRVPMNSWSRSPSDCQ*LSRTGP
Trigger: GGGCCCCGTGCGGCTGAGCCACTGGCAGTCGGAGGG...TGACCTGGACCAGCTGTTCATCGGGACTCTGCTCTTCACCATCCTGCTCTTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636657.1
3UTR-3UTR TCA 90 bp AGGTGTGATAGCAGGGCCTGCCGTGTTCAGGAGCACACAGCAGCGTCCACAAAGTGCTCGCCACCATGGTaGCCGCAGCAGGTGGGAAGC +
Preference number: 2 (lower is better)
Translates to: RCDSRACRVQEHTAASTKCSPPW*PQQVGS
Trigger: GCTTCCCACCTGCTGCGGTCACCATGGTGGCGAGCA...CTTTGTGGACGCTGCTGTGTGCTCCTGAACACGGCAGGCCCTGCTATCACACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321878.10
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
3UTR-3UTR TCA 90 bp CTGGTCCAGGTCATAGGAACAGGAGTCCACGCGCTGGCGCAGAACGTTCCACTTGTGCACGGTTCATCTTaGGCCCGGCGGGAGCACCCA +
Preference number: 2 (lower is better)
Translates to: LVQVIGTGVHALAQNVPLVHGSS*ARREHP
Trigger: TGGGTGCTCCCGCCGGGCTCAAGATGAACCGTGCAC...AAGTGGAACGTTCTGCGCCAGCGCGTGGACTCCTGTTCCTATGACCTGGACCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000635909.1
ENST00000636657.1
ENST00000638143.1
3UTR-3UTR GCA 90 bp GTGATAGCAGGGCCTGCCGTGTTCAGGAGCACACAGCAGCGTCCACAAAGCACAGTGGCCGTGTGGTGGTaGCAGGCGAGCCAGCAGTTC +
Preference number: 2 (lower is better)
Translates to: VIAGPAVFRSTQQRPQSTVAVWW*QASQQF
Trigger: GAACTGCTGGCTCGCCTGGCACCACCACACGGCCAC...TGTGCTTTGTGGACGCTGCTGTGTGCTCCTGAACACGGCAGGCCCTGCTATCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000321878.10
ENST00000540241.1
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
3UTR-3UTR GCA 90 bp GGTGTGATAGCAGGGCCTGCCGTGTTCAGGAGCACACAGCAGCGTCCACAAAGCCGCCAGCTGAGCTGGTaGCACCCTGGCAGAGCAGAT +
Preference number: 2 (lower is better)
Translates to: GVIAGPAVFRSTQQRPQSRQLSW*HPGRAD
Trigger: ATCTGCTCTGCCAGGGTGGCACCAGCTCAGCTGGCG...GCTTTGTGGACGCTGCTGTGTGCTCCTGAACACGGCAGGCCCTGCTATCACACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000321878.10
ENST00000540241.1
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
3UTR-3UTR GCA 90 bp GCCGTGTGGTGGTGCCAGGCGAGCCAGCAGTTCCCTCAGTCCTGCTTGTCCCCTTGTGATAGCAGGGCCTaGCGTGTTCAGGAGCACACA +
Preference number: 2 (lower is better)
Translates to: AVWWCQASQQFPQSCLSPCDSRA*RVQEHT
Trigger: TGTGTGCTCCTGAACACGGCAGGCCCTGCTATCACA...AGGGGACAAGCAGGACTGAGGGAACTGCTGGCTCGCCTGGCACCACCACACGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
3UTR-3UTR GCA 90 bp TGTGGTGGTGCCAGGCGAGCCAGCAGTTCCCTCAGTCCTGCTTGTCCCCTCTCTGGCCACCCCCACATCTaGTCACTCCCAATGACCTCC +
Preference number: 2 (lower is better)
Translates to: CGGARRASSSLSPACPLSGHPHI*SLPMTS
Trigger: GGAGGTCATTGGGAGTGAGCAGATGTGGGGGTGGCC...AGAGAGGGGACAAGCAGGACTGAGGGAACTGCTGGCTCGCCTGGCACCACCACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
3UTR-3UTR GCA 90 bp GGAGGGCCGTGTCTCCAGAGCATGGAGAAGGTAGAACTGGCTTTGTGGGGCGGTAAGTCCCAGCTGGGCTaGACATGGGCCTCCCTGGAC +
Preference number: 2 (lower is better)
Translates to: GGPCLQSMEKVELALWGGKSQLG*TWASLD
Trigger: GTCCAGGGAGGCCCATGTGCAGCCCAGCTGGGACTT...ACCGCCCCACAAAGCCAGTTCTACCTTCTCCATGCTCTGGAGACACGGCCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470411.2
3UTR-3UTR GCA 90 bp GCACTTTTGCAAAAGGGAGGTCTAGGACAAAGTAGGCCGGTGGCAGGTGCGGACCGGCCAGATGCCCGATaGGGCTTCTCCCGTGGAGCC +
Preference number: 2 (lower is better)
Translates to: ALLQKGGLGQSRPVAGADRPDAR*GFSRGA
Trigger: GGCTCCACGGGAGAAGCCGCATCGGGCATCTGGCCG...GTCCGCACCTGCCACCGGCCTACTTTGTCCTAGACCTCCCTTTTGCAAAAGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470411.2
3UTR-3UTR CCA 90 bp AGTCCTGGTGCTGCTGAGATGGGCGCTGCCTCCTCCCACCCACAGCGCGTCATCGAAGGGAGACAGATTTaGCCGCAGGACCTGCTGCTA +
Preference number: 2 (lower is better)
Translates to: SPGAAEMGAASSHPQRVIEGRQI*PQDLLL
Trigger: TAGCAGCAGGTCCTGCGGCCAAATCTGTCTCCCTTC...GATGACGCGCTGTGGGTGGGAGGAGGCAGCGCCCATCTCAGCAGCACCAGGACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
3UTR-3UTR CCA 90 bp CGTTCCACTTCTTCCCCCGGAACAGACGCCACAGTGAGGACAGGCCATGGATCTCACCTGGGGCTGCTGTaGTGGACGGACCCTCTGGAC +
Preference number: 2 (lower is better)
Translates to: RSTSSPGTDATVRTGHGSHLGLL*WTDPLD
Trigger: GTCCAGAGGGTCCGTCCACCACAGCAGCCCCAGGTG...AGATCCATGGCCTGTCCTCACTGTGGCGTCTGTTCCGGGGGAAGAAGTGGAACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635909.1
ENST00000636657.1
3UTR-3UTR CCA 90 bp GGTCTAGGACAAAGTAGGCCGGTGGCAGGTGCGGACGACCACAGGCAAAGCTGCCAGCTGGGCTGCACATaGGCCTCCCTGGACAGGAAA +
Preference number: 2 (lower is better)
Translates to: GLGQSRPVAGADDHRQSCQLGCT*ASLDRK
Trigger: TTTCCTGTCCAGGGAGGCCCATGTGCAGCCCAGCTG...GCAGCTTTGCCTGTGGTCGTCCGCACCTGCCACCGGCCTACTTTGTCCTAGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
3UTR-3UTR CCA 90 bp GAAGGCCCAGAGGCAGCATGGAAATGCACTAGATCTGCAGAGGAGGGGGCTGCAGGGGCTGCACCCGGCTaGAAACGGGGCACAGACCAT +
Preference number: 2 (lower is better)
Translates to: EGPEAAWKCTRSAEEGAAGAAPG*KRGTDH
Trigger: ATGGTCTGTGCCCCGTTTCCAGCCGGGTGCAGCCCC...TGCAGCCCCCTCCTCTGCAGATCTAGTGCATTTCCATGCTGCCTCTGGGCCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
3UTR-3UTR CCA 90 bp GTGGCCGTGTGGTGGTGCCAGGCGAGCCAGCAGTTCCCTCAGTCCTGCTTGTCCGCGGCTGTAGGGCAGTaGGTTTATCTGCATCAGGAG +
Preference number: 2 (lower is better)
Translates to: VAVWWCQASQQFPQSCLSAAVGQ*VYLHQE
Trigger: CTCCTGATGCAGATAAACCCACTGCCCTACAGCCGC...GGACAAGCAGGACTGAGGGAACTGCTGGCTCGCCTGGCACCACCACACGGCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443147.5
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
3UTR-3UTR CCA 90 bp GCTGTGGCCGTGTGGTGGTGCCAGGCGAGCCAGCAGTTCCCTCAGTCCTGCTTGGCGGCTGTAGGGCAGTaGGTTTATCTGCATCAGGAG +
Preference number: 2 (lower is better)
Translates to: AVAVWWCQASQQFPQSCLAAVGQ*VYLHQE
Trigger: CTCCTGATGCAGATAAACCCACTGCCCTACAGCCGC...CAAGCAGGACTGAGGGAACTGCTGGCTCGCCTGGCACCACCACACGGCCACAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443147.5
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
3UTR-3UTR GCA 90 bp AGCCCAAGGTGTGATAGCAGGGCCTGCCGTGTTCAGGAGCACACAGCAGCGTCCACAGCAGCCTGGCGATaGTCACAGCCTGCTGATGGT +
Preference number: 2 (lower is better)
Translates to: SPRCDSRACRVQEHTAASTAAWR*SQPADG
Trigger: ACCATCAGCAGGCTGTGAGCATCGCCAGGCTGCTGT...GGACGCTGCTGTGTGCTCCTGAACACGGCAGGCCCTGCTATCACACCTTGGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
3UTR-3UTR GCA 90 bp CAAGGTGTGATAGCAGGGCCTGCCGTGTTCAGGAGCACACAGCAGCGTCCACAACGCCAGCTGAGCTGGTaGCACCCTGGCAGAGCAGAT +
Preference number: 2 (lower is better)
Translates to: QGVIAGPAVFRSTQQRPQRQLSW*HPGRAD
Trigger: ATCTGCTCTGCCAGGGTGGCACCAGCTCAGCTGGCG...TTGTGGACGCTGCTGTGTGCTCCTGAACACGGCAGGCCCTGCTATCACACCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000321878.10
ENST00000540241.1
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
3UTR-3UTR GCA 90 bp TCCACAGAGGCCCGAGGGTGGGCCAAAGAGTCAGGTACCACCCCCAGCAGGAAGATGGGAGACAAGCTGTaGCTCTGGCTCTCAGCACAG +
Preference number: 2 (lower is better)
Translates to: STEARGWAKESGTTPSRKMGDKL*LWLSAQ
Trigger: CTGTGCTGAGAGCCAGAGGCACAGCTTGTCTCCCAT...CTTCCTGCTGGGGGTGGTACCTGACTCTTTGGCCCACCCTCGGGCCTCTGTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
3UTR-3UTR GCA 90 bp CTCCAGGGAACATCCGCAAATAAACCCCGTGTGGTTCAGGGAGTGAGGGCCCGGGCACCCATCAGCCACTaGAGCAGATGCTGGAGCTCC +
Preference number: 2 (lower is better)
Translates to: LQGTSANKPRVVQGVRARAPISH*SRCWSS
Trigger: GGAGCTCCAGCATCTGCTGCAGTGGCTGATGGGTGC...CCGGGCCCTCACTCCCTGAACCACACGGGGTTTATTTGCGGATGTTCCCTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635909.1
ENST00000636657.1
3UTR-3UTR CCA 90 bp GTGATAGCAGGGCCTGCCGTGTTCAGGAGCACACAGCAGCGTCCACAAAGCACAGAGCTGGTGCCACCCTaGCAGAGCAGATGGCTGGCT +
Preference number: 2 (lower is better)
Translates to: VIAGPAVFRSTQQRPQSTELVPP*QSRWLA
Trigger: AGCCAGCCATCTGCTCTGCCAGGGTGGCACCAGCTC...TGTGCTTTGTGGACGCTGCTGTGTGCTCCTGAACACGGCAGGCCCTGCTATCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000321878.10
ENST00000540241.1
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
3UTR-3UTR CCA 90 bp GCAGTGCTCTGGACACCTGGGGTTGCTGTGCTCGCCACCATGGTGACCGCAGCAGCGGCTGTAGGGCAGTaGGTTTATCTGCATCAGGAG +
Preference number: 2 (lower is better)
Translates to: AVLWTPGVAVLATMVTAAAAVGQ*VYLHQE
Trigger: CTCCTGATGCAGATAAACCCACTGCCCTACAGCCGC...TGCTGCGGTCACCATGGTGGCGAGCACAGCAACCCCAGGTGTCCAGAGCACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000635205.1
ENST00000635909.1
ENST00000636657.1
3UTR-3UTR TCA 90 bp GGTCTAGGACAAAGTAGGCCGGTGGCAGGTGCGGACGACCACAGGCAAAGCTGCACAGGAAAGGTTTCATaGCCCTGGCTCTGCAGAGGG +
Preference number: 2 (lower is better)
Translates to: GLGQSRPVAGADDHRQSCTGKVS*PWLCRG
Trigger: CCCTCTGCAGAGCCAGGGTCATGAAACCTTTCCTGT...GCAGCTTTGCCTGTGGTCGTCCGCACCTGCCACCGGCCTACTTTGTCCTAGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
3UTR-3UTR GCA 90 bp GAAGGCCCAGAGGCAGCATGGAAATGCACTAGATCTGCAGAGGAGGGGGCTGCAACAGCCACACAGACGTaGCTGATGCTGCCCCCAGAG +
Preference number: 2 (lower is better)
Translates to: EGPEAAWKCTRSAEEGAATATQT*LMLPPE
Trigger: CTCTGGGGGCAGCATCAGGCACGTCTGTGTGGCTGT...TGCAGCCCCCTCCTCTGCAGATCTAGTGCATTTCCATGCTGCCTCTGGGCCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
3UTR-3UTR GCA 90 bp GCACTTTTGCAAAAGGGAGGTCTAGGACAAAGTAGGCCGGTGGCAGGTGCGGACAGCCCGGCTGGCTCCTaGACACAGCCCCTTCAGAAG +
Preference number: 2 (lower is better)
Translates to: ALLQKGGLGQSRPVAGADSPAGS*TQPLQK
Trigger: CTTCTGAAGGGGCTGTGTGCAGGAGCCAGCCGGGCT...GTCCGCACCTGCCACCGGCCTACTTTGTCCTAGACCTCCCTTTTGCAAAAGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000470411.2
3UTR-3UTR CCA 90 bp CAAGGTGTGATAGCAGGGCCTGCCGTGTTCAGGAGCACACAGCAGCGTCCACAAAGTGCTCTGGACACCTaGGGTTGCTGTGCTCGCCAC +
Preference number: 2 (lower is better)
Translates to: QGVIAGPAVFRSTQQRPQSALDT*GCCARH
Trigger: GTGGCGAGCACAGCAACCCCAGGTGTCCAGAGCACT...TTGTGGACGCTGCTGTGTGCTCCTGAACACGGCAGGCCCTGCTATCACACCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321878.10
ENST00000635205.1
ENST00000635909.1
ENST00000636657.1
3UTR-3UTR CCA 90 bp TCCACAGAGGCCCGAGGGTGGGCCAAAGAGTCAGGTACCACCCCCAGCAGGAAGGACAAGCTGTGCCTCTaGCTCTCAGCACAGGAGTTA +
Preference number: 2 (lower is better)
Translates to: STEARGWAKESGTTPSRKDKLCL*LSAQEL
Trigger: TAACTCCTGTGCTGAGAGCCAGAGGCACAGCTTGTC...CTTCCTGCTGGGGGTGGTACCTGACTCTTTGGCCCACCCTCGGGCCTCTGTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
3UTR-3UTR CCA 90 bp GGTCTAGGACAAAGTAGGCCGGTGGCAGGTGCGGACGACCACAGGCAAAGCTGCAGGGAAGGTGGGAGATaGGAGACAAGCTGTGCCTCT +
Preference number: 2 (lower is better)
Translates to: GLGQSRPVAGADDHRQSCREGGR*ETSCAS
Trigger: AGAGGCACAGCTTGTCTCCCATCTCCCACCTTCCCT...GCAGCTTTGCCTGTGGTCGTCCGCACCTGCCACCGGCCTACTTTGTCCTAGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
3UTR-3UTR CCA 90 bp GCACTTTTGCAAAAGGGAGGTCTAGGACAAAGTAGGCCGGTGGCAGGTGCGGACTCCTTCCTTCTGGGCTaGAGCTCCCTGCACCCCCAC +
Preference number: 2 (lower is better)
Translates to: ALLQKGGLGQSRPVAGADSFLLG*SSLHPH
Trigger: GTGGGGGTGCAGGGAGCTCCAGCCCAGAAGGAAGGA...GTCCGCACCTGCCACCGGCCTACTTTGTCCTAGACCTCCCTTTTGCAAAAGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
3UTR-3UTR CCA 90 bp GAAGGCCCAGAGGCAGCATGGAAATGCACTAGATCTGCAGAGGAGGGGGCTGCAGACAAAGTAGGCCGGTaGCAGGTGCGGACGACCACA +
Preference number: 2 (lower is better)
Translates to: EGPEAAWKCTRSAEEGAADKVGR*QVRTTT
Trigger: TGTGGTCGTCCGCACCTGCCACCGGCCTACTTTGTC...TGCAGCCCCCTCCTCTGCAGATCTAGTGCATTTCCATGCTGCCTCTGGGCCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
3UTR-3UTR CCA 90 bp ACGGGGGTCAGCGACTGCTTCAATCCCCCAGATGCAGGGTGCTGTTCGGCTGAGGCGGCTGTAGGGCAGTaGGTTTATCTGCATCAGGAG +
Preference number: 2 (lower is better)
Translates to: TGVSDCFNPPDAGCCSAEAAVGQ*VYLHQE
Trigger: CTCCTGATGCAGATAAACCCACTGCCCTACAGCCGC...CTCAGCCGAACAGCACCCTGCATCTGGGGGATTGAAGCAGTCGCTGACCCCCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000635909.1
ENST00000636657.1
3UTR-3UTR CCA 90 bp CACCAGGAGCCGGAGCAGGGTGAACACCAGGTAGTACAGGGCTGTGGTAGGCAGGCGGCTGTAGGGCAGTaGGTTTATCTGCATCAGGAG +
Preference number: 2 (lower is better)
Translates to: HQEPEQGEHQVVQGCGRQAAVGQ*VYLHQE
Trigger: CTCCTGATGCAGATAAACCCACTGCCCTACAGCCGC...CTGCCTACCACAGCCCTGTACTACCTGGTGTTCACCCTGCTCCGGCTCCTGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635909.1
ENST00000636657.1
3UTR-3UTR CCA 90 bp GCACTTTTGCAAAAGGGAGGTCTAGGACAAAGTAGGCCGGTGGCAGGTGCGGACAGGCCCCAGCGCCCCTaGAGTTCCTGCTTCTGGTTC +
Preference number: 2 (lower is better)
Translates to: ALLQKGGLGQSRPVAGADRPQRP*SSCFWF
Trigger: GAACCAGAAGCAGGAACTCCAGGGGCGCTGGGGCCT...GTCCGCACCTGCCACCGGCCTACTTTGTCCTAGACCTCCCTTTTGCAAAAGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000470411.2
3UTR-3UTR CCA 90 bp AGCGACTGCTTCAATCCCCCAGATGCAGGGTGCTGTTCGGCTGAGGGAGCTAGAAAGCGGCCCAGCACCTaGTCCAGTGCACGGTTCATC +
Preference number: 2 (lower is better)
Translates to: SDCFNPPDAGCCSAEGARKRPST*SSARFI
Trigger: GATGAACCGTGCACTGGACCAGGTGCTGGGCCGCTT...TCTAGCTCCCTCAGCCGAACAGCACCCTGCATCTGGGGGATTGAAGCAGTCGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635909.1
ENST00000636657.1
3UTR-3UTR GCA 90 bp GCACTTTTGCAAAAGGGAGGTCTAGGACAAAGTAGGCCGGTGGCAGGTGCGGACACGGGGCACAGACCATaGAGGGAAGGTGGGAGATGG +
Preference number: 2 (lower is better)
Translates to: ALLQKGGLGQSRPVAGADTGHRP*REGGRW
Trigger: CCATCTCCCACCTTCCCTGCATGGTCTGTGCCCCGT...GTCCGCACCTGCCACCGGCCTACTTTGTCCTAGACCTCCCTTTTGCAAAAGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
3UTR-3UTR GCA 90 bp CTGGCCACAAGCAGGCCCAGTGCACACCTGCAGCCCACACAAGACCCACCCAGTGAGGCAGCATGGAAATaGACTAGATCTGCAGAGGAG +
Preference number: 2 (lower is better)
Translates to: LATSRPSAHLQPTQDPPSEAAWK*TRSAEE
Trigger: CTCCTCTGCAGATCTAGTGCATTTCCATGCTGCCTC...ACTGGGTGGGTCTTGTGTGGGCTGCAGGTGTGCACTGGGCCTGCTTGTGGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
3UTR-3UTR GCA 90 bp GCACTTTTGCAAAAGGGAGGTCTAGGACAAAGTAGGCCGGTGGCAGGTGCGGACACAGCCACACAGACGTaGCTGATGCTGCCCCCAGAG +
Preference number: 2 (lower is better)
Translates to: ALLQKGGLGQSRPVAGADTATQT*LMLPPE
Trigger: CTCTGGGGGCAGCATCAGGCACGTCTGTGTGGCTGT...GTCCGCACCTGCCACCGGCCTACTTTGTCCTAGACCTCCCTTTTGCAAAAGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
3UTR-3UTR CCA 90 bp GGTCTAGGACAAAGTAGGCCGGTGGCAGGTGCGGACGACCACAGGCAAAGCTGCGGCCCAGAGGCAGCATaGAAATGCACTAGATCTGCA +
Preference number: 2 (lower is better)
Translates to: GLGQSRPVAGADDHRQSCGPEAA*KCTRSA
Trigger: TGCAGATCTAGTGCATTTCCATGCTGCCTCTGGGCC...GCAGCTTTGCCTGTGGTCGTCCGCACCTGCCACCGGCCTACTTTGTCCTAGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
3UTR-3UTR TCA 90 bp AGGTGTGATAGCAGGGCCTGCCGTGTTCAGGAGCACACAGCAGCGTCCACAAAGTCTGCTCACTCCCAATaGCCTCCAAGCCCAAGGTGT +
Preference number: 2 (lower is better)
Translates to: RCDSRACRVQEHTAASTKSAHSQ*PPSPRC
Trigger: ACACCTTGGGCTTGGAGGTCATTGGGAGTGAGCAGA...CTTTGTGGACGCTGCTGTGTGCTCCTGAACACGGCAGGCCCTGCTATCACACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000321878.10
ENST00000540241.1
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
3UTR-3UTR GCA 90 bp CCTGGCGATGCTCACAGCCTGCTGATGGTTTCTTCACAAAGCGACCTCTCCAGGCAGTTCCCTCAGTCCTaGTTGTCCCCTCTCTGCCTC +
Preference number: 2 (lower is better)
Translates to: PGDAHSLLMVSSQSDLSRQFPQS*LSPLCL
Trigger: GAGGCAGAGAGGGGACAAGCAGGACTGAGGGAACTG...CCTGGAGAGGTCGCTTTGTGAAGAAACCATCAGCAGGCTGTGAGCATCGCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635909.1
ENST00000636657.1
3UTR-3UTR TCA 90 bp CTGCTGATGGTTTCTTCACAAAGCGACCTCTCCAGGGAACATCCGCAAATAAACGGCAGGCAGTGCCAGTaGTGGAGTGCGGCCAGCCTG +
Preference number: 2 (lower is better)
Translates to: LLMVSSQSDLSREHPQINGRQCQ*WSAASL
Trigger: CAGGCTGGCCGCACTCCATCACTGGCACTGCCTGCC...GTTTATTTGCGGATGTTCCCTGGAGAGGTCGCTTTGTGAAGAAACCATCAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
3UTR-3UTR CCA 90 bp GAAGGCCCAGAGGCAGCATGGAAATGCACTAGATCTGCAGAGGAGGGGGCTGCAGGCCCAGAGGCAGCATaGAAATGCACTAGATCTGCA +
Preference number: 2 (lower is better)
Translates to: EGPEAAWKCTRSAEEGAAGPEAA*KCTRSA
Trigger: TGCAGATCTAGTGCATTTCCATGCTGCCTCTGGGCC...TGCAGCCCCCTCCTCTGCAGATCTAGTGCATTTCCATGCTGCCTCTGGGCCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
3UTR-3UTR GCA 90 bp CTGCTGATGGTTTCTTCACAAAGCGACCTCTCCAGGGAACATCCGCAAATAAACCGCCAGCTGAGCTGGTaGCACCCTGGCAGAGCAGAT +
Preference number: 2 (lower is better)
Translates to: LLMVSSQSDLSREHPQINRQLSW*HPGRAD
Trigger: ATCTGCTCTGCCAGGGTGGCACCAGCTCAGCTGGCG...GTTTATTTGCGGATGTTCCCTGGAGAGGTCGCTTTGTGAAGAAACCATCAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
3UTR-3UTR GCA 90 bp GCACTTTTGCAAAAGGGAGGTCTAGGACAAAGTAGGCCGGTGGCAGGTGCGGACGAGGCAGCATGGAAATaGACTAGATCTGCAGAGGAG +
Preference number: 2 (lower is better)
Translates to: ALLQKGGLGQSRPVAGADEAAWK*TRSAEE
Trigger: CTCCTCTGCAGATCTAGTGCATTTCCATGCTGCCTC...GTCCGCACCTGCCACCGGCCTACTTTGTCCTAGACCTCCCTTTTGCAAAAGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
3UTR-3UTR GCA 90 bp CTGCTGATGGTTTCTTCACAAAGCGACCTCTCCAGGGAACATCCGCAAATAAACTGTGATAGCAGGGCCTaGCGTGTTCAGGAGCACACA +
Preference number: 2 (lower is better)
Translates to: LLMVSSQSDLSREHPQINCDSRA*RVQEHT
Trigger: TGTGTGCTCCTGAACACGGCAGGCCCTGCTATCACA...GTTTATTTGCGGATGTTCCCTGGAGAGGTCGCTTTGTGAAGAAACCATCAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
3UTR CCA 72 bp GTCCCGAGGCTCGCCTGGCCAGCTCCGCGAGGATGCTaGCCTCCACGCCCTCCGACTGCCAGTGGCTCAGCC +
Preference number: 3 (lower is better)
Translates to: VPRLAWPAPRGC*PPRPPTASGSA
Trigger: GGCTGAGCCACTGGCAGTCGGAGGGCGTGGAGGCCAGCATCCTCGCGGAGCTGGCCAGGCGAGCCTCGGGAC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636657.1
3UTR GCA 72 bp TGGGTCCCGAGGCTCGCCTGGCCAGCTCCGCGAGGATaGTGGCCTCCACGCCCTCCGACTGCCAGTGGCTCA +
Preference number: 3 (lower is better)
Translates to: WVPRLAWPAPRG*WPPRPPTASGS
Trigger: TGAGCCACTGGCAGTCGGAGGGCGTGGAGGCCAGCATCCTCGCGGAGCTGGCCAGGCGAGCCTCGGGACCCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636657.1
3UTR CCA 72 bp CCACTGGGGAGCCCCCAGGGAGACCAGCCCTCCACCTaGGGCTGCTGTGGTGGACGGACCCTCTGGACCTGG +
Preference number: 3 (lower is better)
Translates to: PLGSPQGDQPST*GCCGGRTLWTW
Trigger: CCAGGTCCAGAGGGTCCGTCCACCACAGCAGCCCCAGGTGGAGGGCTGGTCTCCCTGGGGGCTCCCCAGTGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000321878.10
ENST00000635205.1
ENST00000635909.1
ENST00000636657.1
3UTR CCA 72 bp CCAGGGCCACGTCCAGCAGCACAGAGGCCACCGTGTTaGCCTTCCTGGAAGGGAGGTCCGGCCCGGCCGGCA +
Preference number: 3 (lower is better)
Translates to: PGPRPAAQRPPC*PSWKGGPARPA
Trigger: TGCCGGCCGGGCCGGACCTCCCTTCCAGGAAGGCCAACACGGTGGCCTCTGTGCTGCTGGACGTGGCCCTGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470411.2
3UTR-3UTR CAA 90 bp CGCACCCAGACCGTGCCGTCTGGCAGGCACTTTCGGCCTCAGTGCCACGGCCCCTCCCCAAGGAACAGCTaGCGGCACAGGGCGCCCCAG +
Preference number: 3 (lower is better)
Translates to: RTQTVPSGRHFRPQCHGPSPRNS*RHRAPQ
Trigger: CTGGGGCGCCCTGTGCCGCAAGCTGTTCCTTGGGGA...GGGGCCGTGGCACTGAGGCCGAAAGTGCCTGCCAGACGGCACGGTCTGGGTGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000635909.1
ENST00000636657.1
3UTR GCA 72 bp ATCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTaGCGGAGGACACGGAACTTCACGCCAGCCGCCAGC +
Preference number: 3 (lower is better)
Translates to: ICIRRRRGLPAS*RRTRNFTPAAS
Trigger: GCTGGCGGCTGGCGTGAAGTTCCGTGTCCTCCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGAT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
ENST00000637468.1
3UTR CCA 72 bp AGGGCGTCGGCCAGATGCCCGATGCGGCTTCTCCCGTaGAGCCAGGACAGCAGCATGAGGCCCAGGGCCACG +
Preference number: 3 (lower is better)
Translates to: RASARCPMRLLP*SQDSSMRPRAT
Trigger: CGTGGCCCTGGGCCTCATGCTGCTGTCCTGGCTCCACGGGAGAAGCCGCATCGGGCATCTGGCCGACGCCCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000470411.2
ENST00000635909.1
ENST00000636657.1
3UTR-3UTR CAA 90 bp TGGCCGTGTGGTGGTGCCAGGCGAGCCAGCAGTTCCCTCAGTCCTGCTTGTCCCGCGCCCCAGGAGTGCTaGGGGTGGCAGCCACAGCTG +
Preference number: 3 (lower is better)
Translates to: WPCGGARRASSSLSPACPAPQEC*GWQPQL
Trigger: CAGCTGTGGCTGCCACCCCAAGCACTCCTGGGGCGC...GGGACAAGCAGGACTGAGGGAACTGCTGGCTCGCCTGGCACCACCACACGGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000443147.5
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
3UTR-3UTR CAA 90 bp GGCCGTGTGGTGGTGCCAGGCGAGCCAGCAGTTCCCTCAGTCCTGCTTGTCCCCTCCCCAAGGAACAGCTaGCGGCACAGGGCGCCCCAG +
Preference number: 3 (lower is better)
Translates to: GRVVVPGEPAVPSVLLVPSPRNS*RHRAPQ
Trigger: CTGGGGCGCCCTGTGCCGCAAGCTGTTCCTTGGGGA...GGGGACAAGCAGGACTGAGGGAACTGCTGGCTCGCCTGGCACCACCACACGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000443147.5
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
3UTR GCA 72 bp CAGACCGTGCCGTCTGGCAGGCACTTTCGGCCTCAGTaGCACGGCCCCCTCCCCAGGCCACTCACACTCCTG +
Preference number: 3 (lower is better)
Translates to: QTVPSGRHFRPQ*HGPLPRPLTLL
Trigger: CAGGAGTGTGAGTGGCCTGGGGAGGGGGCCGTGGCACTGAGGCCGAAAGTGCCTGCCAGACGGCACGGTCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
3UTR GCA 72 bp AGCTCCGCGAGGATGCTGGCCTCCACGCCCTCCGACTaGCAGTGGCTCAGCCGCACGGGGCCCTCATCAAAG +
Preference number: 3 (lower is better)
Translates to: SSARMLASTPSD*QWLSRTGPSSK
Trigger: CTTTGATGAGGGCCCCGTGCGGCTGAGCCACTGGCAGTCGGAGGGCGTGGAGGCCAGCATCCTCGCGGAGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636657.1
3UTR CCA 72 bp GCTCACAGGGAACACCCGCACCCAGACCGTGCCGTCTaGCAGGCACTTTCGGCCTCAGTGCCACGGCCCCCT +
Preference number: 3 (lower is better)
Translates to: AHREHPHPDRAV*QALSASVPRPP
Trigger: AGGGGGCCGTGGCACTGAGGCCGAAAGTGCCTGCCAGACGGCACGGTCTGGGTGCGGGTGTTCCCTGTGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
3UTR CCA 72 bp CAGGGAGAGGCGGGCTCCCCAGAGCCTCAGCCCGGCTaGCTCCTGCACACAGCCCCTTCAGAAGGAAAGGGG +
Preference number: 3 (lower is better)
Translates to: QGEAGSPEPQPG*LLHTAPSEGKG
Trigger: CCCCTTTCCTTCTGAAGGGGCTGTGTGCAGGAGCCAGCCGGGCTGAGGCTCTGGGGAGCCCGCCTCTCCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470411.2
3UTR CCA 72 bp TGGCCAACAGCAGGCAAATGGGTCCCGAGGCTCGCCTaGCCAGCTCCGCGAGGATGCTGGCCTCCACGCCCT +
Preference number: 3 (lower is better)
Translates to: WPTAGKWVPRLA*PAPRGCWPPRP
Trigger: AGGGCGTGGAGGCCAGCATCCTCGCGGAGCTGGCCAGGCGAGCCTCGGGACCCATTTGCCTGCTGTTGGCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636657.1
3UTR-3UTR CAA 90 bp CACAGGGAACACCCGCACCCAGACCGTGCCGTCTGGCAGGCACTTTCGGCCTCATCAGTGGGCGGGCCCTaGACACTGAGGCTGCTCCCG +
Preference number: 3 (lower is better)
Translates to: HREHPHPDRAVWQALSASSVGGP*TLRLLP
Trigger: CGGGAGCAGCCTCAGTGTCAAGGGCCCGCCCACTGA...TGAGGCCGAAAGTGCCTGCCAGACGGCACGGTCTGGGTGCGGGTGTTCCCTGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
3UTR-3UTR CAA 90 bp TGGCTGTGGCCGTGTGGTGGTGCCAGGCGAGCCAGCAGTTCCCTCAGTCCTGCTTCAGTGGGCGGGCCCTaGACACTGAGGCTGCTCCCG +
Preference number: 3 (lower is better)
Translates to: WLWPCGGARRASSSLSPASVGGP*TLRLLP
Trigger: CGGGAGCAGCCTCAGTGTCAAGGGCCCGCCCACTGA...AGCAGGACTGAGGGAACTGCTGGCTCGCCTGGCACCACCACACGGCCACAGCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635909.1
ENST00000636657.1
3UTR-3UTR CAA 90 bp AGAGCAGATGGCTGGCTGTGGCCGTGTGGTGGTGCCAGGCGAGCCAGCAGTTCCTCAGTGGGCGGGCCCTaGACACTGAGGCTGCTCCCG +
Preference number: 3 (lower is better)
Translates to: RADGWLWPCGGARRASSSSVGGP*TLRLLP
Trigger: CGGGAGCAGCCTCAGTGTCAAGGGCCCGCCCACTGA...GGAACTGCTGGCTCGCCTGGCACCACCACACGGCCACAGCCAGCCATCTGCTCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
3UTR-3UTR CAA 90 bp TGGTGCCAGGCGAGCCAGCAGTTCCCTCAGTCCTGCTTGTCCCCTCTCTGCCTCGCGCCCCAGGAGTGCTaGGGGTGGCAGCCACAGCTG +
Preference number: 3 (lower is better)
Translates to: WCQASQQFPQSCLSPLCLAPQEC*GWQPQL
Trigger: CAGCTGTGGCTGCCACCCCAAGCACTCCTGGGGCGC...GAGGCAGAGAGGGGACAAGCAGGACTGAGGGAACTGCTGGCTCGCCTGGCACCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000443147.5
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
3UTR-3UTR CAA 90 bp AGAGCAGATGGCTGGCTGTGGCCGTGTGGTGGTGCCAGGCGAGCCAGCAGTTCCTCCCCAAGGAACAGCTaGCGGCACAGGGCGCCCCAG +
Preference number: 3 (lower is better)
Translates to: RADGWLWPCGGARRASSSSPRNS*RHRAPQ
Trigger: CTGGGGCGCCCTGTGCCGCAAGCTGTTCCTTGGGGA...GGAACTGCTGGCTCGCCTGGCACCACCACACGGCCACAGCCAGCCATCTGCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000443147.5
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
3UTR-3UTR CAA 90 bp CCTGCAGGCTCCCCTCCTGAAGCGGACTCGGGCTCACAGGGAACACCCGCACCCGACAGGGGCCAGAGCTaGAACACTCGGCAGGCACTG +
Preference number: 3 (lower is better)
Translates to: PAGSPPEADSGSQGTPAPDRGQS*NTRQAL
Trigger: CAGTGCCTGCCGAGTGTTCAAGCTCTGGCCCCTGTC...GGGTGCGGGTGTTCCCTGTGAGCCCGAGTCCGCTTCAGGAGGGGAGCCTGCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636657.1
3UTR-3UTR CAA 90 bp GACCGTGCCGTCTGGCAGGCACTTTCGGCCTCAGTGCCACGGCCCCCTCCCCAGACAGAGGCCACCGTGTaGGCCTTCCTCATCAGCTGG +
Preference number: 3 (lower is better)
Translates to: DRAVWQALSASVPRPPPQTEATV*AFLISW
Trigger: CCAGCTGATGAGGAAGGCCAACACGGTGGCCTCTGT...CTGGGGAGGGGGCCGTGGCACTGAGGCCGAAAGTGCCTGCCAGACGGCACGGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635909.1
ENST00000636657.1
3UTR GCA 72 bp GACTCGGGCTCACAGGGAACACCCGCACCCAGACCGTaGCGTCTGGCAGGCACTTTCGGCCTCAGTGCCACG +
Preference number: 3 (lower is better)
Translates to: DSGSQGTPAPRP*RLAGTFGLSAT
Trigger: CGTGGCACTGAGGCCGAAAGTGCCTGCCAGACGGCACGGTCTGGGTGCGGGTGTTCCCTGTGAGCCCGAGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
3UTR GCA 72 bp AAGCGGGTCCCAAGGCAGGCAGTGCCAGTGATGGAGTaGGGCCAGCCTGGCTGGCCACCCCCACATCTGCTC +
Preference number: 3 (lower is better)
Translates to: KRVPRQAVPVME*GQPGWPPPHLL
Trigger: GAGCAGATGTGGGGGTGGCCAGCCAGGCTGGCCGCACTCCATCACTGGCACTGCCTGCCTTGGGACCCGCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000321878.10
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
3UTR GCA 72 bp CTCACGTCAGCCACAGGAACGAGGGCGTCGGCCAGATaGCCGATGCGGCTTCTCCCGTGGAGCCAGGACAGC +
Preference number: 3 (lower is better)
Translates to: LTSATGTRASAR*PMRLLPWSQDS
Trigger: GCTGTCCTGGCTCCACGGGAGAAGCCGCATCGGGCATCTGGCCGACGCCCTCGTTCCTGTGGCTGACGTGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470411.2
3UTR GCA 72 bp ACGTGGTCAGCCACAGGAACGAGGGCGTCGGCCAGATaGCCGATGCGGCTTCTCCCGTGGAGCCAGGACAGC +
Preference number: 3 (lower is better)
Translates to: TWSATGTRASAR*PMRLLPWSQDS
Trigger: GCTGTCCTGGCTCCACGGGAGAAGCCGCATCGGGCATCTGGCCGACGCCCTCGTTCCTGTGGCTGACCACGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635909.1
ENST00000636657.1
3UTR GCA 72 bp GCCACCGTCAGGCCCAGGCAGGCCGAGAGGCCCACGTaGCAAAGGATGTGCTCCACGAAGGGGGACATGAGG +
Preference number: 3 (lower is better)
Translates to: ATVRPRQAERPT*QRMCSTKGDMR
Trigger: CCTCATGTCCCCCTTCGTGGAGCACATCCTTTGGCACGTGGGCCTCTCGGCCTGCCTGGGCCTGACGGTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635909.1
ENST00000636657.1
3UTR CCA 72 bp GGAGAAGGTAGAACTGGCTTTGTGGGGCGGTGGCTCTaGCCCGGGAAGGCTCTGCTGCCCAGGAGGGGTCCC +
Preference number: 3 (lower is better)
Translates to: GEGRTGFVGRWL*PGKALLPRRGP
Trigger: GGGACCCCTCCTGGGCAGCAGAGCCTTCCCGGGCCAGAGCCACCGCCCCACAAAGCCAGTTCTACCTTCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470411.2
3UTR CCA 72 bp AGACCAGCGACAGCAGGCTGGCCAACAGCAGGCAAATaGGTCCCGAGGCTCGCCTGGCCAGCTCCGCGAGGA +
Preference number: 3 (lower is better)
Translates to: RPATAGWPTAGK*VPRLAWPAPRG
Trigger: TCCTCGCGGAGCTGGCCAGGCGAGCCTCGGGACCCATTTGCCTGCTGTTGGCCAGCCTGCTGTCGCTGGTCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636657.1
3UTR-3UTR CAA 90 bp GGTGCTGCTGAGATGGGCGCTGCCTCCTCCCACCCACAGCGCGTCATCCCCTCATCTGGACACCTGGGGTaGCTGTGCTCGCCACCATGG +
Preference number: 3 (lower is better)
Translates to: GAAEMGAASSHPQRVIPSSGHLG*LCSPPW
Trigger: CCATGGTGGCGAGCACAGCAACCCCAGGTGTCCAGA...TGAGGGGATGACGCGCTGTGGGTGGGAGGAGGCAGCGCCCATCTCAGCAGCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
3UTR TCA 72 bp TCTGGACACCTGGGGTTGCTGTGCTCGCCACCATGGTaGCCGCAGCAGGTGGGAAGCGGGTCCCAAGGCAGG +
Preference number: 3 (lower is better)
Translates to: SGHLGLLCSPPW*PQQVGSGSQGR
Trigger: CCTGCCTTGGGACCCGCTTCCCACCTGCTGCGGTCACCATGGTGGCGAGCACAGCAACCCCAGGTGTCCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321878.10
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
3UTR GCA 72 bp GGGGGCTGCACCCGGCTGGAAACGGGGCACAGACCATaGAGGGAAGGTGGGAGATGGGAGACAAGCTGTGCC +
Preference number: 3 (lower is better)
Translates to: GGCTRLETGHRP*REGGRWETSCA
Trigger: GGCACAGCTTGTCTCCCATCTCCCACCTTCCCTGCATGGTCTGTGCCCCGTTTCCAGCCGGGTGCAGCCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
3UTR GCA 72 bp GCAGTGGGTTTATCTGCATCAGGAGGCGGAGGGGCCTaGCGGCCTCGTGCCGGAGGACACGGAACTTCACGC +
Preference number: 3 (lower is better)
Translates to: AVGLSASGGGGA*RPRAGGHGTSR
Trigger: GCGTGAAGTTCCGTGTCCTCCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGATAAACCCACTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
3UTR CCA 72 bp CTGATCTCAGGGACCACAAGGGAGATACCAGGACGCTaGGCCCACAGGGAGAGGCGGGCTCCCCAGAGCCTC +
Preference number: 3 (lower is better)
Translates to: LISGTTREIPGR*AHRERRAPQSL
Trigger: GAGGCTCTGGGGAGCCCGCCTCTCCCTGTGGGCCCAGCGTCCTGGTATCTCCCTTGTGGTCCCTGAGATCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470411.2
3UTR-3UTR CAA 90 bp GCTGTGGCCGTGTGGTGGTGCCAGGCGAGCCAGCAGTTCCCTCAGTCCTGCTTGTCTGGACACCTGGGGTaGCTGTGCTCGCCACCATGG +
Preference number: 3 (lower is better)
Translates to: AVAVWWCQASQQFPQSCLSGHLG*LCSPPW
Trigger: CCATGGTGGCGAGCACAGCAACCCCAGGTGTCCAGA...CAAGCAGGACTGAGGGAACTGCTGGCTCGCCTGGCACCACCACACGGCCACAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
3UTR TCA 72 bp CGCCAGCCTGTAGGGCCGGCAGAGCCGAAGACCCAGTaGGTACAGCGGCAGGGAGTTGATGAGGTCCACGAG +
Preference number: 3 (lower is better)
Translates to: RQPVGPAEPKTQ*VQRQGVDEVHE
Trigger: CTCGTGGACCTCATCAACTCCCTGCCGCTGTACTCACTGGGTCTTCGGCTCTGCCGGCCCTACAGGCTGGCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
ENST00000637468.1
3UTR GCA 72 bp GAGTTGATGAGGTCCACGAGCAGATGGATCAGGCCCTaGACGGCGACCACCAGGAGCCGGAGCTGGTCCAGG +
Preference number: 3 (lower is better)
Translates to: ELMRSTSRWIRP*TATTRSRSWSR
Trigger: CCTGGACCAGCTCCGGCTCCTGGTGGTCGCCGTGCAGGGCCTGATCCATCTGCTCGTGGACCTCATCAACTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637468.1
3UTR CCA 72 bp TGCTGCTACGGGGCACCGTGGACGAATAGGTACGGCTaGGTCAGTGGGCGGGCCCTTGACACTGAGGCTGCT +
Preference number: 3 (lower is better)
Translates to: CCYGAPWTNRYG*VSGRALDTEAA
Trigger: AGCAGCCTCAGTGTCAAGGGCCCGCCCACTGACCCAGCCGTACCTATTCGTCCACGGTGCCCCGTAGCAGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
3UTR CCA 72 bp CAGGCAGTGCCAGTGATGGAGTGCGGCCAGCCTGGCTaGCCACCCCCACATCTGCTCACTCCCAATGACCTC +
Preference number: 3 (lower is better)
Translates to: QAVPVMECGQPG*PPPHLLTPNDL
Trigger: GAGGTCATTGGGAGTGAGCAGATGTGGGGGTGGCCAGCCAGGCTGGCCGCACTCCATCACTGGCACTGCCTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000321878.10
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
3UTR CCA 72 bp GAGCATGGAGAAGGTAGAACTGGCTTTGTGGGGCGGTaGCTCTGGCCCGGGAAGGCTCTGCTGCCCAGGAGG +
Preference number: 3 (lower is better)
Translates to: EHGEGRTGFVGR*LWPGKALLPRR
Trigger: CCTCCTGGGCAGCAGAGCCTTCCCGGGCCAGAGCCACCGCCCCACAAAGCCAGTTCTACCTTCTCCATGCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470411.2
3UTR CCA 72 bp TACAGCGGCAGGGAGTTGATGAGGTCCACGAGCAGATaGATCAGGCCCTGCACGGCGACCACCAGGAGCCGG +
Preference number: 3 (lower is better)
Translates to: YSGRELMRSTSR*IRPCTATTRSR
Trigger: CCGGCTCCTGGTGGTCGCCGTGCAGGGCCTGATCCATCTGCTCGTGGACCTCATCAACTCCCTGCCGCTGTA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000635909.1
ENST00000636657.1
ENST00000637468.1
3UTR TCA 72 bp ACAGCAGCGTCCACAAAGCACAGGACATGCGCCAGCTaGGCTGGTGCCACCCTGGCAGAGCAGATGGCTGGC +
Preference number: 3 (lower is better)
Translates to: TAASTKHRTCAS*AGATLAEQMAG
Trigger: GCCAGCCATCTGCTCTGCCAGGGTGGCACCAGCTCAGCTGGCGCATGTCCTGTGCTTTGTGGACGCTGCTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000321878.10
ENST00000540241.1
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
3UTR TCA 72 bp GCCTGGCTGGCCACCCCCACATCTGCTCACTCCCAATaGCCTCCAAGCCCAAGGTGTGATAGCAGGGCCTGC +
Preference number: 3 (lower is better)
Translates to: AWLATPTSAHSQ*PPSPRCDSRAC
Trigger: GCAGGCCCTGCTATCACACCTTGGGCTTGGAGGTCATTGGGAGTGAGCAGATGTGGGGGTGGCCAGCCAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000321878.10
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
3UTR GCA 72 bp GGGGTCAGCGACTGCTTCAATCCCCCAGATGCAGGGTaGTGTTCGGCTGAGGGAGCTAGAGGGTGCCTGGGA +
Preference number: 3 (lower is better)
Translates to: GVSDCFNPPDAG*CSAEGARGCLG
Trigger: TCCCAGGCACCCTCTAGCTCCCTCAGCCGAACAGCACCCTGCATCTGGGGGATTGAAGCAGTCGCTGACCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
3UTR GCA 72 bp GTGGTAGAGGAAGAAGCGGCCCAGCACCTGGTCCAGTaGACGGTTCATCTTGAGCCCGGCGGGAGCACCCAT +
Preference number: 3 (lower is better)
Translates to: VVEEEAAQHLVQ*TVHLEPGGSTH
Trigger: ATGGGTGCTCCCGCCGGGCTCAAGATGAACCGTGCACTGGACCAGGTGCTGGGCCGCTTCTTCCTCTACCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635909.1
ENST00000636657.1
3UTR GCA 72 bp CCCATGAAGGGAGACAGATTTGGCCGCAGGACCTGCTaGTACGGGGCACCGTGGACGAATAGGTACGGCTGG +
Preference number: 3 (lower is better)
Translates to: PMKGDRFGRRTC*YGAPWTNRYGW
Trigger: CCAGCCGTACCTATTCGTCCACGGTGCCCCGTAGCAGCAGGTCCTGCGGCCAAATCTGTCTCCCTTCATGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
3UTR GCA 72 bp AGGCCCATGAAGGGAGACAGATTTGGCCGCAGGACCTaGTGCTACGGGGCACCGTGGACGAATAGGTACGGC +
Preference number: 3 (lower is better)
Translates to: RPMKGDRFGRRT*CYGAPWTNRYG
Trigger: GCCGTACCTATTCGTCCACGGTGCCCCGTAGCAGCAGGTCCTGCGGCCAAATCTGTCTCCCTTCATGGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
3UTR CCA 72 bp TGTCTCCAGAGCATGGAGAAGGTAGAACTGGCTTTGTaGGGCGGTGGCTCTGGCCCGGGAAGGCTCTGCTGC +
Preference number: 3 (lower is better)
Translates to: CLQSMEKVELAL*GGGSGPGRLCC
Trigger: GCAGCAGAGCCTTCCCGGGCCAGAGCCACCGCCCCACAAAGCCAGTTCTACCTTCTCCATGCTCTGGAGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470411.2
3UTR-3UTR CAA 90 bp GAAGGCCCAGAGGCAGCATGGAAATGCACTAGATCTGCAGAGGAGGGGGCTGCAACAGAGGCCACCGTGTaGGCCTTCCTGGAAGGGAGG +
Preference number: 3 (lower is better)
Translates to: EGPEAAWKCTRSAEEGAATEATV*AFLEGR
Trigger: CCTCCCTTCCAGGAAGGCCAACACGGTGGCCTCTGT...TGCAGCCCCCTCCTCTGCAGATCTAGTGCATTTCCATGCTGCCTCTGGGCCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470411.2
3UTR GCA 72 bp ACTGAGGCTGCTCCCGCCCCCACAGCAGCCTGGCGATaGTCACAGCCTGCTGATGGTTTCTTCACAAAGCGA +
Preference number: 3 (lower is better)
Translates to: TEAAPAPTAAWR*SQPADGFFTKR
Trigger: TCGCTTTGTGAAGAAACCATCAGCAGGCTGTGAGCATCGCCAGGCTGCTGTGGGGGCGGGAGCAGCCTCAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
3UTR GCA 72 bp CGTGTACTGAAGATTAGCGTGAGGTGCTCCAGCCGGTaGCGGAGCTGTTCGCACGTGGAGAGTTTGCTCCCG +
Preference number: 3 (lower is better)
Translates to: RVLKISVRCSSR*RSCSHVESLLP
Trigger: CGGGAGCAAACTCTCCACGTGCGAACAGCTCCGGCACCGGCTGGAGCACCTCACGCTAATCTTCAGTACACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636657.1
3UTR GCA 72 bp TTCTCCGCCTTCCGTGTACTGAAGATTAGCGTGAGGTaGTCCAGCCGGTGCCGGAGCTGTTCGCACGTGGAG +
Preference number: 3 (lower is better)
Translates to: FSAFRVLKISVR*SSRCRSCSHVE
Trigger: CTCCACGTGCGAACAGCTCCGGCACCGGCTGGAGCACCTCACGCTAATCTTCAGTACACGGAAGGCGGAGAA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636657.1
3UTR TCA 72 bp AACGTTCCACTTCTTCCCCCGGAACAGACGCCACAGTaGGGACAGGCCATGGATCTTCAGGCAGTACAGCTG +
Preference number: 3 (lower is better)
Translates to: NVPLLPPEQTPQ*GQAMDLQAVQL
Trigger: CAGCTGTACTGCCTGAAGATCCATGGCCTGTCCTCACTGTGGCGTCTGTTCCGGGGGAAGAAGTGGAACGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638143.1
3UTR CCA 72 bp CAGGGAAGGTGGGAGATGGGAGACAAGCTGTGCCTCTaGCTCTCAGCACAGGAGTTACAGAATCAGCACAGG +
Preference number: 3 (lower is better)
Translates to: QGRWEMGDKLCL*LSAQELQNQHR
Trigger: CCTGTGCTGATTCTGTAACTCCTGTGCTGAGAGCCAGAGGCACAGCTTGTCTCCCATCTCCCACCTTCCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR CCA 90 bp GCGGAGGGGCCTGCCGGCCTCGTGCCGGAGGACACGGAACTTCACGCCAGCCGCCCCTCCGACTGCCAGTaGCTCAGCCGCACGGGGCCC +
Preference number: 4 (lower is better)
Translates to: AEGPAGLVPEDTELHASRPSDCQ*LSRTGP
Trigger: GGGCCCCGTGCGGCTGAGCCACTGGCAGTCGGAGGG...GCGGCTGGCGTGAAGTTCCGTGTCCTCCGGCACGAGGCCGGCAGGCCCCTCCGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636657.1
CDS-3UTR CCA 90 bp GGGGCCTGCCGGCCTCGTGCCGGAGGACACGGAACTTCACGCCAGCCGCCAGCCGGTTGGGGACCCCGATaGGCGGGCCCGGGCAGACGA +
Preference number: 4 (lower is better)
Translates to: GACRPRAGGHGTSRQPPAGWGPR*AGPGRR
Trigger: TCGTCTGCCCGGGCCCGCCCATCGGGGTCCCCAACC...GGCTGGCGGCTGGCGTGAAGTTCCGTGTCCTCCGGCACGAGGCCGGCAGGCCCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636657.1
CDS-3UTR TCA 90 bp GGCCTCGTGCCGGAGGACACGGAACTTCACGCCAGCCGCCAGCCTGTAGGGCCGGTGTGGTTCAGGGAGTaGGGGCCCGGGCCCGCTGGG +
Preference number: 4 (lower is better)
Translates to: GLVPEDTELHASRQPVGPVWFRE*GPGPAG
Trigger: CCCAGCGGGCCCGGGCCCTCACTCCCTGAACCACAC...CGGCCCTACAGGCTGGCGGCTGGCGTGAAGTTCCGTGTCCTCCGGCACGAGGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp GGGCCTGCCGGCCTCGTGCCGGAGGACACGGAACTTCACGCCAGCCGCCAGCCTCCAGGACCACGGCGCTaGTCTGCTCCGGCACCCACC +
Preference number: 4 (lower is better)
Translates to: GPAGLVPEDTELHASRQPPGPRR*SAPAPT
Trigger: GGTGGGTGCCGGAGCAGAGCAGCGCCGTGGTCCTGG...AGGCTGGCGGCTGGCGTGAAGTTCCGTGTCCTCCGGCACGAGGCCGGCAGGCCC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636657.1
CDS-3UTR CCA 90 bp CGTGCCGTCTGGCAGGCACTTTCGGCCTCAGTGCCACGGCCCCCTCCCCAGGCCGTGGTGGCTCCAGCCTaGCGGTCGGGCAGGACGGTG +
Preference number: 4 (lower is better)
Translates to: RAVWQALSASVPRPPPQAVVAPA*RSGRTV
Trigger: CACCGTCCTGCCCGACCGCCAGGCTGGAGCCACCAC...GGCCTGGGGAGGGGGCCGTGGCACTGAGGCCGAAAGTGCCTGCCAGACGGCACG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000026218.9
ENST00000321878.10
CDS-3UTR CCA 90 bp AGGTCCGGCCCGGCCGGCATGAGGGTGGCCAGCACAGCCTGGGGCCGCAGGAGGGGGGCTGCACCCGGCTaGAAACGGGGCACAGACCAT +
Preference number: 4 (lower is better)
Translates to: RSGPAGMRVASTAWGRRRGAAPG*KRGTDH
Trigger: ATGGTCTGTGCCCCGTTTCCAGCCGGGTGCAGCCCC...CCTCCTGCGGCCCCAGGCTGTGCTGGCCACCCTCATGCCGGCCGGGCCGGACCT
73% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000470411.2
CDS-3UTR GCA 90 bp TCCTCCCACCCACAGCGCGTCATCCCCTCACCAGCCGGCACCTGCAGGCTCCCCCCAGGACCACGGCGCTaGTCTGCTCCGGCACCCACC +
Preference number: 4 (lower is better)
Translates to: SSHPQRVIPSPAGTCRLPPGPRR*SAPAPT
Trigger: GGTGGGTGCCGGAGCAGAGCAGCGCCGTGGTCCTGG...GGGGAGCCTGCAGGTGCCGGCTGGTGAGGGGATGACGCGCTGTGGGTGGGAGGA
72% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000636657.1
CDS-3UTR GCA 90 bp AGGCGGAGGGGCCTGCCGGCCTCGTGCCGGAGGACACGGAACTTCACGCCAGCCCCCCAAGGAACAGCTTaGGGCACAGGGCGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: RRRGLPASCRRTRNFTPAPQGTA*GTGRPR
Trigger: CCTGGGGCGCCCTGTGCCGCAAGCTGTTCCTTGGGG...GGCTGGCGTGAAGTTCCGTGTCCTCCGGCACGAGGCCGGCAGGCCCCTCCGCCT
72% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR GCA 90 bp CAGTGTCCTCAGGCCCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGGCCTGCCGGCCTCGTaGCGGAGGACACGGAACTTC +
Preference number: 4 (lower is better)
Translates to: QCPQALHQEAEGPAGLVPGLPAS*RRTRNF
Trigger: GAAGTTCCGTGTCCTCCGGCACGAGGCCGGCAGGCC...CGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGGGCCTGAGGACACTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420990.6
CDS-3UTR CCA 90 bp ATCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGAGGACACGGAACGGGTCCGGATGGGGTTaGGGACCCCGATGGGCGGGC +
Preference number: 4 (lower is better)
Translates to: ICIRRRRGLPASCRRTRNGSGWG*GPRWAG
Trigger: GCCCGCCCATCGGGGTCCCCAACCCCATCCGGACCC...GTTCCGTGTCCTCCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGAT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636657.1
CDS-3UTR CCA 90 bp GCGGCCCAGCACCTGGTCCAGTGCACGGTTCATCTTGAGCCCGGCGGGAGCACCCCACGCCCACCTGGCTaGCCTGCCGCACCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: AAQHLVQCTVHLEPGGSTPRPPG*PAAPGP
Trigger: TGGCCCAGGTGCGGCAGGCCAGCCAGGTGGGCGTGG...GGTGCTCCCGCCGGGCTCAAGATGAACCGTGCACTGGACCAGGTGCTGGGCCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636657.1
CDS-3UTR CCA 90 bp CGTGCCGTCTGGCAGGCACTTTCGGCCTCAGTGCCACGGCCCCCTCCCCAGGCCGCGCTTGCCGGTGGGTaGCCTCGCAGCTCCAGAACG +
Preference number: 4 (lower is better)
Translates to: RAVWQALSASVPRPPPQAALAGG*PRSSRT
Trigger: CGTTCTGGAGCTGCGAGGCCACCCACCGGCAAGCGC...GGCCTGGGGAGGGGGCCGTGGCACTGAGGCCGAAAGTGCCTGCCAGACGGCACG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp CGCACCCAGACCGTGCCGTCTGGCAGGCACTTTCGGCCTCAGTGCCACGGCCCCCCGTGCTGGCAGTGGTaGCTCCAGCCTGGCGGTCGG +
Preference number: 4 (lower is better)
Translates to: RTQTVPSGRHFRPQCHGPPCWQW*LQPGGR
Trigger: CCGACCGCCAGGCTGGAGCCACCACTGCCAGCACGG...GGGGCCGTGGCACTGAGGCCGAAAGTGCCTGCCAGACGGCACGGTCTGGGTGCG
72% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000026218.9
ENST00000321878.10
CDS-3UTR CCA 90 bp GTTGGCCTTCCTGGAAGGGAGGTCCGGCCCGGCCGGCATGAGGGTGGCCAGCACCCGTGCTGGCAGTGGTaGCTCCAGCCTGGCGGTCGG +
Preference number: 4 (lower is better)
Translates to: VGLPGREVRPGRHEGGQHPCWQW*LQPGGR
Trigger: CCGACCGCCAGGCTGGAGCCACCACTGCCAGCACGG...GTGCTGGCCACCCTCATGCCGGCCGGGCCGGACCTCCCTTCCAGGAAGGCCAAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470411.2
CDS-3UTR TCA 90 bp GTGCCGTCTGGCAGGCACTTTCGGCCTCAGTGCCACGGCCCCCTCCCCAGGCCAGGCAGGCAGTGCCAGTaGTGGAGTGCGGCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: VPSGRHFRPQCHGPLPRPGRQCQ*WSAASL
Trigger: CAGGCTGGCCGCACTCCATCACTGGCACTGCCTGCC...TGGCCTGGGGAGGGGGCCGTGGCACTGAGGCCGAAAGTGCCTGCCAGACGGCAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp GTGCCGTCTGGCAGGCACTTTCGGCCTCAGTGCCACGGCCCCCTCCCCAGGCCACTCTCCTCGGGCTCCTaGCGGCAGTGGCACCAGGTG +
Preference number: 4 (lower is better)
Translates to: VPSGRHFRPQCHGPLPRPLSSGS*RQWHQV
Trigger: CACCTGGTGCCACTGCCGGCAGGAGCCCGAGGAGAG...TGGCCTGGGGAGGGGGCCGTGGCACTGAGGCCGAAAGTGCCTGCCAGACGGCAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000636657.1
CDS-3UTR GCA 90 bp CTGCAGAGGAGGGGGCTGCACCCGGCTGGAAACGGGGCACAGACCATGCAGGGAGGGGCAGTGGGCGCTTaGCGGTGGGTGGCCTCGCAG +
Preference number: 4 (lower is better)
Translates to: LQRRGLHPAGNGAQTMQGGAVGA*RWVASQ
Trigger: CTGCGAGGCCACCCACCGGCAAGCGCCCACTGCCCC...TCCCTGCATGGTCTGTGCCCCGTTTCCAGCCGGGTGCAGCCCCCTCCTCTGCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR GCA 90 bp GGCCTGGCCACAAGCAGGCCCAGTGCACACCTGCAGCCCACACAAGACCCACCCGGGGCAGTGGGCGCTTaGCGGTGGGTGGCCTCGCAG +
Preference number: 4 (lower is better)
Translates to: GLATSRPSAHLQPTQDPPGAVGA*RWVASQ
Trigger: CTGCGAGGCCACCCACCGGCAAGCGCCCACTGCCCC...GGGTGGGTCTTGTGTGGGCTGCAGGTGTGCACTGGGCCTGCTTGTGGCCAGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR GCA 90 bp CTTCCTGGAAGGGAGGTCCGGCCCGGCCGGCATGAGGGTGGCCAGCACAGCCTGTCCACGCCCTCCGACTaGCAGTGGCTCAGCCGCACG +
Preference number: 4 (lower is better)
Translates to: LPGREVRPGRHEGGQHSLSTPSD*QWLSRT
Trigger: CGTGCGGCTGAGCCACTGGCAGTCGGAGGGCGTGGA...CAGGCTGTGCTGGCCACCCTCATGCCGGCCGGGCCGGACCTCCCTTCCAGGAAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470411.2
CDS-3UTR GCA 90 bp GGACTCGGGCTCACAGGGAACACCCGCACCCAGACCGTGCCGTCTGGCAGGCACCCAGCTCCGCGAGGATaGTGGCCTCCACGCCCTCCG +
Preference number: 4 (lower is better)
Translates to: GLGLTGNTRTQTVPSGRHPAPRG*WPPRPP
Trigger: CGGAGGGCGTGGAGGCCAGCATCCTCGCGGAGCTGG...GTGCCTGCCAGACGGCACGGTCTGGGTGCGGGTGTTCCCTGTGAGCCCGAGTCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000636657.1
CDS-3UTR GCA 90 bp GACCGTGCCGTCTGGCAGGCACTTTCGGCCTCAGTGCCACGGCCCCCTCCCCAGCGGCCAGATGCCCGATaGGGCTTCTCCCGTGGAGCC +
Preference number: 4 (lower is better)
Translates to: DRAVWQALSASVPRPPPQRPDAR*GFSRGA
Trigger: GGCTCCACGGGAGAAGCCGCATCGGGCATCTGGCCG...CTGGGGAGGGGGCCGTGGCACTGAGGCCGAAAGTGCCTGCCAGACGGCACGGTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp CTTCCTGGAAGGGAGGTCCGGCCCGGCCGGCATGAGGGTGGCCAGCACAGCCTGCGGCCAGATGCCCGATaGGGCTTCTCCCGTGGAGCC +
Preference number: 4 (lower is better)
Translates to: LPGREVRPGRHEGGQHSLRPDAR*GFSRGA
Trigger: GGCTCCACGGGAGAAGCCGCATCGGGCATCTGGCCG...CAGGCTGTGCTGGCCACCCTCATGCCGGCCGGGCCGGACCTCCCTTCCAGGAAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470411.2
CDS-3UTR GCA 90 bp GACCGTGCCGTCTGGCAGGCACTTTCGGCCTCAGTGCCACGGCCCCCTCCCCAGAGGGCGCCCCAGGAGTaGTTGGGGTGGCAGCCACAG +
Preference number: 4 (lower is better)
Translates to: DRAVWQALSASVPRPPPQRAPQE*LGWQPQ
Trigger: CTGTGGCTGCCACCCCAAGCACTCCTGGGGCGCCCT...CTGGGGAGGGGGCCGTGGCACTGAGGCCGAAAGTGCCTGCCAGACGGCACGGTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp GCGGAGGGGCCTGCCGGCCTCGTGCCGGAGGACACGGAACTTCACGCCAGCCGCCCCCCAGATGCAGGGTaGTGTTCGGCTGAGGGAGCT +
Preference number: 4 (lower is better)
Translates to: AEGPAGLVPEDTELHASRPPDAG*CSAEGA
Trigger: AGCTCCCTCAGCCGAACAGCACCCTGCATCTGGGGG...GCGGCTGGCGTGAAGTTCCGTGTCCTCCGGCACGAGGCCGGCAGGCCCCTCCGC
71% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp CCTGGTGCTGCTGAGATGGGCGCTGCCTCCTCCCACCCACAGCGCGTCATCCCCGGCCGCAGGACCTGCTaGTACGGGGCACCGTGGACG +
Preference number: 4 (lower is better)
Translates to: PGAAEMGAASSHPQRVIPGRRTC*YGAPWT
Trigger: CGTCCACGGTGCCCCGTAGCAGCAGGTCCTGCGGCC...GGGGATGACGCGCTGTGGGTGGGAGGAGGCAGCGCCCATCTCAGCAGCACCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp GGCTCCCCTCCTGAAGCGGACTCGGGCTCACAGGGAACACCCGCACCCAGACCGGGCCGCAGGACCTGCTaGTACGGGGCACCGTGGACG +
Preference number: 4 (lower is better)
Translates to: GSPPEADSGSQGTPAPRPGRRTC*YGAPWT
Trigger: CGTCCACGGTGCCCCGTAGCAGCAGGTCCTGCGGCC...CGGTCTGGGTGCGGGTGTTCCCTGTGAGCCCGAGTCCGCTTCAGGAGGGGAGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp CGTGCCGTCTGGCAGGCACTTTCGGCCTCAGTGCCACGGCCCCCTCCCCAGGCCTTTGGCCGCAGGACCTaGTGCTACGGGGCACCGTGG +
Preference number: 4 (lower is better)
Translates to: RAVWQALSASVPRPPPQAFGRRT*CYGAPW
Trigger: CCACGGTGCCCCGTAGCAGCAGGTCCTGCGGCCAAA...GGCCTGGGGAGGGGGCCGTGGCACTGAGGCCGAAAGTGCCTGCCAGACGGCACG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp GGGCGGTGGCTCTGGCCCGGGAAGGCTCTGCTGCCCAGGAGGGGTCCCCACGCCACGGGGCACAGACCATaGAGGGAAGGTGGGAGATGG +
Preference number: 4 (lower is better)
Translates to: GRWLWPGKALLPRRGPHATGHRP*REGGRW
Trigger: CCATCTCCCACCTTCCCTGCATGGTCTGTGCCCCGT...GGCGTGGGGACCCCTCCTGGGCAGCAGAGCCTTCCCGGGCCAGAGCCACCGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000470411.2
CDS-3UTR CCA 90 bp GCAGGCTCCCCTCCTGAAGCGGACTCGGGCTCACAGGGAACACCCGCACCCAGAGGGTCCGGATGGGGTTaGGGACCCCGATGGGCGGGC +
Preference number: 4 (lower is better)
Translates to: AGSPPEADSGSQGTPAPRGSGWG*GPRWAG
Trigger: GCCCGCCCATCGGGGTCCCCAACCCCATCCGGACCC...TCTGGGTGCGGGTGTTCCCTGTGAGCCCGAGTCCGCTTCAGGAGGGGAGCCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000636657.1
CDS-3UTR CCA 90 bp GCACCTGCAGGCTCCCCTCCTGAAGCGGACTCGGGCTCACAGGGAACACCCGCACCACGCCCACCTGGCTaGCCTGCCGCACCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: APAGSPPEADSGSQGTPAPRPPG*PAAPGP
Trigger: TGGCCCAGGTGCGGCAGGCCAGCCAGGTGGGCGTGG...TGCGGGTGTTCCCTGTGAGCCCGAGTCCGCTTCAGGAGGGGAGCCTGCAGGTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000636657.1
CDS-3UTR CCA 90 bp TTTATCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGAGGACACGGCCACGCCCACCTGGCTaGCCTGCCGCACCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: FICIRRRRGLPASCRRTRPRPPG*PAAPGP
Trigger: TGGCCCAGGTGCGGCAGGCCAGCCAGGTGGGCGTGG...CCGTGTCCTCCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGATAAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443147.5
ENST00000636657.1
CDS-3UTR CCA 90 bp GGACTCGGGCTCACAGGGAACACCCGCACCCAGACCGTGCCGTCTGGCAGGCACGTGGGCGCTTGCCGGTaGGTGGCCTCGCAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: GLGLTGNTRTQTVPSGRHVGACR*VASQLQ
Trigger: CTGGAGCTGCGAGGCCACCCACCGGCAAGCGCCCAC...GTGCCTGCCAGACGGCACGGTCTGGGTGCGGGTGTTCCCTGTGAGCCCGAGTCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp GGCAGTCCTGGTGCTGCTGAGATGGGCGCTGCCTCCTCCCACCCACAGCGCGTCGTGGGCGCTTGCCGGTaGGTGGCCTCGCAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: GSPGAAEMGAASSHPQRVVGACR*VASQLQ
Trigger: CTGGAGCTGCGAGGCCACCCACCGGCAAGCGCCCAC...GACGCGCTGTGGGTGGGAGGAGGCAGCGCCCATCTCAGCAGCACCAGGACTGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp GAAGCGGACTCGGGCTCACAGGGAACACCCGCACCCAGACCGTGCCGTCTGGCACCCTCCGACTGCCAGTaGCTCAGCCGCACGGGGCCC +
Preference number: 4 (lower is better)
Translates to: EADSGSQGTPAPRPCRLAPSDCQ*LSRTGP
Trigger: GGGCCCCGTGCGGCTGAGCCACTGGCAGTCGGAGGG...TGCCAGACGGCACGGTCTGGGTGCGGGTGTTCCCTGTGAGCCCGAGTCCGCTTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000636657.1
CDS-3UTR CCA 90 bp GTCCACTCACGTCAGCCACAGGAACGAGGGCGTCGGCCAGATGCCCGATGCGGCCCCTCCGACTGCCAGTaGCTCAGCCGCACGGGGCCC +
Preference number: 4 (lower is better)
Translates to: VHSRQPQERGRRPDARCGPSDCQ*LSRTGP
Trigger: GGGCCCCGTGCGGCTGAGCCACTGGCAGTCGGAGGG...GCCGCATCGGGCATCTGGCCGACGCCCTCGTTCCTGTGGCTGACGTGAGTGGAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470411.2
CDS-3UTR CCA 90 bp GACCGTGCCGTCTGGCAGGCACTTTCGGCCTCAGTGCCACGGCCCCCTCCCCAGGCTCCGCGAGGATGCTaGCCTCCACGCCCTCCGACT +
Preference number: 4 (lower is better)
Translates to: DRAVWQALSASVPRPPPQAPRGC*PPRPPT
Trigger: AGTCGGAGGGCGTGGAGGCCAGCATCCTCGCGGAGC...CTGGGGAGGGGGCCGTGGCACTGAGGCCGAAAGTGCCTGCCAGACGGCACGGTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000636657.1
CDS-3UTR CCA 90 bp CGCACCCAGACCGTGCCGTCTGGCAGGCACTTTCGGCCTCAGTGCCACGGCCCCCGCCCCAGGAGTGCTTaGGGTGGCAGCCACAGCTGG +
Preference number: 4 (lower is better)
Translates to: RTQTVPSGRHFRPQCHGPRPRSA*GGSHSW
Trigger: CCAGCTGTGGCTGCCACCCCAAGCACTCCTGGGGCG...GGGGCCGTGGCACTGAGGCCGAAAGTGCCTGCCAGACGGCACGGTCTGGGTGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp CGCACCCAGACCGTGCCGTCTGGCAGGCACTTTCGGCCTCAGTGCCACGGCCCCGCTGTGGCCGTGTGGTaGTGCCAGGCGAGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: RTQTVPSGRHFRPQCHGPAVAVW*CQASQQ
Trigger: CTGCTGGCTCGCCTGGCACCACCACACGGCCACAGC...GGGGCCGTGGCACTGAGGCCGAAAGTGCCTGCCAGACGGCACGGTCTGGGTGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp GTGCCGTCTGGCAGGCACTTTCGGCCTCAGTGCCACGGCCCCCTCCCCAGGCCACTGGCTGTGGCCGTGTaGTGGTGCCAGGCGAGCCAG +
Preference number: 4 (lower is better)
Translates to: VPSGRHFRPQCHGPLPRPLAVAV*WCQASQ
Trigger: CTGGCTCGCCTGGCACCACCACACGGCCACAGCCAG...TGGCCTGGGGAGGGGGCCGTGGCACTGAGGCCGAAAGTGCCTGCCAGACGGCAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp AGGCGGAGGGGCCTGCCGGCCTCGTGCCGGAGGACACGGAACTTCACGCCAGCCCCCTGGCAGAGCAGATaGCTGGCTGTGGCCGTGTGG +
Preference number: 4 (lower is better)
Translates to: RRRGLPASCRRTRNFTPAPWQSR*LAVAVW
Trigger: CCACACGGCCACAGCCAGCCATCTGCTCTGCCAGGG...GGCTGGCGTGAAGTTCCGTGTCCTCCGGCACGAGGCCGGCAGGCCCCTCCGCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR CCA 90 bp GTGCCGTCTGGCAGGCACTTTCGGCCTCAGTGCCACGGCCCCCTCCCCAGGCCAGACCAGCCCTCCACCTaGGGCTGCTGTGGTGGACGG +
Preference number: 4 (lower is better)
Translates to: VPSGRHFRPQCHGPLPRPDQPST*GCCGGR
Trigger: CCGTCCACCACAGCAGCCCCAGGTGGAGGGCTGGTC...TGGCCTGGGGAGGGGGCCGTGGCACTGAGGCCGAAAGTGCCTGCCAGACGGCAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp CACCAGTGTCCTCAGGCCCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGGCCGCGCTTGGCCCCTaGCCTGCAGTTCAGACTCCC +
Preference number: 4 (lower is better)
Translates to: HQCPQALHQEAEGPAGLVAALGP*PAVQTP
Trigger: GGGAGTCTGAACTGCAGGCCAGGGGCCAAGCGCGGC...CACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGGGCCTGAGGACACTGGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420990.6
CDS-3UTR CCA 90 bp CCCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGAGGACACGGAACCACGCCAGTGGATGGTaGCCGCCCTGCTGGCTCCTA +
Preference number: 4 (lower is better)
Translates to: PCIRRRRGLPASCRRTRNHASGW*PPCWLL
Trigger: TAGGAGCCAGCAGGGCGGCCACCATCCACTGGCGTG...GTTCCGTGTCCTCCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420990.6
CDS-3UTR CCA 90 bp CAGTGTCCTCAGGCCCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGCTTCACGCCAGTGGATaGTGGCCGCCCTGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: QCPQALHQEAEGPAGLVPLHASG*WPPCWL
Trigger: GAGCCAGCAGGGCGGCCACCATCCACTGGCGTGAAG...CGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGGGCCTGAGGACACTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420990.6
CDS-3UTR TCA 90 bp CACCCGCACCCAGACCGTGCCGTCTGGCAGGCACTTTCGGCCTCAGTGCCACGGGCCAGGACAGCAGCATaGGGCCCAGGGCCACGTCCA +
Preference number: 4 (lower is better)
Translates to: HPHPDRAVWQALSASVPRARTAA*GPGPRP
Trigger: TGGACGTGGCCCTGGGCCTCATGCTGCTGTCCTGGC...CCGTGGCACTGAGGCCGAAAGTGCCTGCCAGACGGCACGGTCTGGGTGCGGGTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR TCA 90 bp ATCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGAGGACACGGAACGCCAGGACAGCAGCATaGGGCCCAGGGCCACGTCCA +
Preference number: 4 (lower is better)
Translates to: ICIRRRRGLPASCRRTRNARTAA*GPGPRP
Trigger: TGGACGTGGCCCTGGGCCTCATGCTGCTGTCCTGGC...GTTCCGTGTCCTCCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443147.5
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
ENST00000637468.1
CDS-3UTR TCA 90 bp TGCCGGCCTCGTGCCGGAGGACACGGAACTTCACGCCAGCCGCCAGCCTGTAGGGCCAGGACAGCAGCATaGGGCCCAGGGCCACGTCCA +
Preference number: 4 (lower is better)
Translates to: CRPRAGGHGTSRQPPACRARTAA*GPGPRP
Trigger: TGGACGTGGCCCTGGGCCTCATGCTGCTGTCCTGGC...CCTACAGGCTGGCGGCTGGCGTGAAGTTCCGTGTCCTCCGGCACGAGGCCGGCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
ENST00000637468.1
CDS-3UTR TCA 90 bp CACCAGTGTCCTCAGGCCCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGGTGCACGGTTCATCTTaGGCCCGGCGGGAGCACCCA +
Preference number: 4 (lower is better)
Translates to: HQCPQALHQEAEGPAGLVVHGSS*ARREHP
Trigger: TGGGTGCTCCCGCCGGGCTCAAGATGAACCGTGCAC...CACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGGGCCTGAGGACACTGGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420990.6
CDS-3UTR TCA 90 bp AGTGTCCTCAGGCCCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGGGAGCCGGAGCAGGGTaGACACCAGGTAGTACAGGG +
Preference number: 4 (lower is better)
Translates to: SVLRPCIRRRRGLPASCRGAGAG*TPGSTG
Trigger: CCCTGTACTACCTGGTGTTCACCCTGCTCCGGCTCC...CCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGGGCCTGAGGACACT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420990.6
CDS-3UTR TCA 90 bp CACCCGCACCCAGACCGTGCCGTCTGGCAGGCACTTTCGGCCTCAGTGCCACGGGGCAGGCAGTGCCAGTaGTGGAGTGCGGCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: HPHPDRAVWQALSASVPRGRQCQ*WSAASL
Trigger: CAGGCTGGCCGCACTCCATCACTGGCACTGCCTGCC...CCGTGGCACTGAGGCCGAAAGTGCCTGCCAGACGGCACGGTCTGGGTGCGGGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR TCA 90 bp GGGCAGTGGGTTTATCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGGCAGGCAGTGCCAGTaGTGGAGTGCGGCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: GQWVYLHQEAEGPAGLVPGRQCQ*WSAASL
Trigger: CAGGCTGGCCGCACTCCATCACTGGCACTGCCTGCC...CGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGATAAACCCACTGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR TCA 90 bp CCCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGAGGACACGGAACAGGTCTCCAGGGTTCTaGACCCGCCAGCCTGTAGGG +
Preference number: 4 (lower is better)
Translates to: PCIRRRRGLPASCRRTRNRSPGF*TRQPVG
Trigger: CCCTACAGGCTGGCGGGTTCAGAACCCTGGAGACCT...GTTCCGTGTCCTCCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420990.6
CDS-3UTR GCA 90 bp GCAGCAGGTGGGAAGCGGGTCCCAAGGCAGGCAGTGCCAGTGATGGAGTGCGGCGGCAGTGGCACCAGGTaGCCAGCACGGCCACGCCCA +
Preference number: 4 (lower is better)
Translates to: AAGGKRVPRQAVPVMECGGSGTR*PARPRP
Trigger: TGGGCGTGGCCGTGCTGGGCACCTGGTGCCACTGCC...GCCGCACTCCATCACTGGCACTGCCTGCCTTGGGACCCGCTTCCCACCTGCTGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321878.10
ENST00000636657.1
CDS-3UTR GCA 90 bp TGGAGCTCCTCGGCCACGTGGTCAGCCACAGGAACGAGGGCGTCGGCCAGATGCGGCAGTGGCACCAGGTaGCCAGCACGGCCACGCCCA +
Preference number: 4 (lower is better)
Translates to: WSSSATWSATGTRASARCGSGTR*PARPRP
Trigger: TGGGCGTGGCCGTGCTGGGCACCTGGTGCCACTGCC...GCATCTGGCCGACGCCCTCGTTCCTGTGGCTGACCACGTGGCCGAGGAGCTCCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636657.1
CDS-3UTR GCA 90 bp CTCACAGGGAACACCCGCACCCAGACCGTGCCGTCTGGCAGGCACTTTCGGCCTGGGGCAGTGGGCGCTTaGCGGTGGGTGGCCTCGCAG +
Preference number: 4 (lower is better)
Translates to: LTGNTRTQTVPSGRHFRPGAVGA*RWVASQ
Trigger: CTGCGAGGCCACCCACCGGCAAGCGCCCACTGCCCC...AGGCCGAAAGTGCCTGCCAGACGGCACGGTCTGGGTGCGGGTGTTCCCTGTGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp GGTGGTGCCAGGCGAGCCAGCAGTTCCCTCAGTCCTGCTTGTCCCCTCTCTGCCGGGGCAGTGGGCGCTTaGCGGTGGGTGGCCTCGCAG +
Preference number: 4 (lower is better)
Translates to: GGARRASSSLSPACPLSAGAVGA*RWVASQ
Trigger: CTGCGAGGCCACCCACCGGCAAGCGCCCACTGCCCC...GGCAGAGAGGGGACAAGCAGGACTGAGGGAACTGCTGGCTCGCCTGGCACCACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443147.5
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp TCACGCCAGCCGCCAGCCTGTAGGGCCGGCAGAGCCGAAGACCCAGTGAGTACAGGGGCAGTGGGCGCTTaGCGGTGGGTGGCCTCGCAG +
Preference number: 4 (lower is better)
Translates to: SRQPPACRAGRAEDPVSTGAVGA*RWVASQ
Trigger: CTGCGAGGCCACCCACCGGCAAGCGCCCACTGCCCC...TGTACTCACTGGGTCTTCGGCTCTGCCGGCCCTACAGGCTGGCGGCTGGCGTGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp GGTGCTGCTGAGATGGGCGCTGCCTCCTCCCACCCACAGCGCGTCATCCCCTCACCAGCTCCGCGAGGATaGTGGCCTCCACGCCCTCCG +
Preference number: 4 (lower is better)
Translates to: GAAEMGAASSHPQRVIPSPAPRG*WPPRPP
Trigger: CGGAGGGCGTGGAGGCCAGCATCCTCGCGGAGCTGG...TGAGGGGATGACGCGCTGTGGGTGGGAGGAGGCAGCGCCCATCTCAGCAGCACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000636657.1
CDS-3UTR GCA 90 bp GCAGTGGGTTTATCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGACCAGCTCCGCGAGGATaGTGGCCTCCACGCCCTCCG +
Preference number: 4 (lower is better)
Translates to: AVGLSASGGGGACRPRAGPAPRG*WPPRPP
Trigger: CGGAGGGCGTGGAGGCCAGCATCCTCGCGGAGCTGG...TCCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGATAAACCCACTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443147.5
ENST00000636657.1
CDS-3UTR GCA 90 bp CTGCAGAGGAGGGGGCTGCACCCGGCTGGAAACGGGGCACAGACCATGCAGGGACCAGCTCCGCGAGGATaGTGGCCTCCACGCCCTCCG +
Preference number: 4 (lower is better)
Translates to: LQRRGLHPAGNGAQTMQGPAPRG*WPPRPP
Trigger: CGGAGGGCGTGGAGGCCAGCATCCTCGCGGAGCTGG...TCCCTGCATGGTCTGTGCCCCGTTTCCAGCCGGGTGCAGCCCCCTCCTCTGCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR GCA 90 bp GGGGCCTGCCGGCCTCGTGCCGGAGGACACGGAACTTCACGCCAGCCGCCAGCCAAGATTAGCGTGAGGTaGTCCAGCCGGTGCCGGAGC +
Preference number: 4 (lower is better)
Translates to: GACRPRAGGHGTSRQPPAKISVR*SSRCRS
Trigger: GCTCCGGCACCGGCTGGAGCACCTCACGCTAATCTT...GGCTGGCGGCTGGCGTGAAGTTCCGTGTCCTCCGGCACGAGGCCGGCAGGCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
ENST00000637468.1
CDS-3UTR GCA 90 bp CTCGTGCCGGAGGACACGGAACTTCACGCCAGCCGCCAGCCTGTAGGGCCGGCACGGCCAGATGCCCGATaGGGCTTCTCCCGTGGAGCC +
Preference number: 4 (lower is better)
Translates to: LVPEDTELHASRQPVGPARPDAR*GFSRGA
Trigger: GGCTCCACGGGAGAAGCCGCATCGGGCATCTGGCCG...TGCCGGCCCTACAGGCTGGCGGCTGGCGTGAAGTTCCGTGTCCTCCGGCACGAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
ENST00000637468.1
CDS-3UTR GCA 90 bp CCTGCAGGCTCCCCTCCTGAAGCGGACTCGGGCTCACAGGGAACACCCGCACCCAGGGCGTCGGCCAGATaGCCGATGCGGCTTCTCCCG +
Preference number: 4 (lower is better)
Translates to: PAGSPPEADSGSQGTPAPRASAR*PMRLLP
Trigger: CGGGAGAAGCCGCATCGGGCATCTGGCCGACGCCCT...GGGTGCGGGTGTTCCCTGTGAGCCCGAGTCCGCTTCAGGAGGGGAGCCTGCAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp CCCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGAGGACACGGAACGCCGAGAGGCCCACGTaGCAAAGGATGTGCTCCACG +
Preference number: 4 (lower is better)
Translates to: PCIRRRRGLPASCRRTRNAERPT*QRMCST
Trigger: CGTGGAGCACATCCTTTGGCACGTGGGCCTCTCGGC...GTTCCGTGTCCTCCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420990.6
CDS-3UTR GCA 90 bp AGTGTCCTCAGGCCCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGAGATGGATCAGGCCCTaGACGGCGACCACCAGGAGC +
Preference number: 4 (lower is better)
Translates to: SVLRPCIRRRRGLPASCRRWIRP*TATTRS
Trigger: GCTCCTGGTGGTCGCCGTGCAGGGCCTGATCCATCT...CCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGGGCCTGAGGACACT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420990.6
CDS-3UTR GCA 90 bp AGGCGGAGGGGCCTGCCGGCCTCGTGCCGGAGGACACGGAACTTCACGCCAGCCAGATGGATCAGGCCCTaGACGGCGACCACCAGGAGC +
Preference number: 4 (lower is better)
Translates to: RRRGLPASCRRTRNFTPARWIRP*TATTRS
Trigger: GCTCCTGGTGGTCGCCGTGCAGGGCCTGATCCATCT...GGCTGGCGTGAAGTTCCGTGTCCTCCGGCACGAGGCCGGCAGGCCCCTCCGCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
ENST00000637468.1
CDS-3UTR GCA 90 bp GGCTCCCCTCCTGAAGCGGACTCGGGCTCACAGGGAACACCCGCACCCAGACCGAGGGCGCCCCAGGAGTaGTTGGGGTGGCAGCCACAG +
Preference number: 4 (lower is better)
Translates to: GSPPEADSGSQGTPAPRPRAPQE*LGWQPQ
Trigger: CTGTGGCTGCCACCCCAAGCACTCCTGGGGCGCCCT...CGGTCTGGGTGCGGGTGTTCCCTGTGAGCCCGAGTCCGCTTCAGGAGGGGAGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp GGCAGTGGGTTTATCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGAGGGCGCCCCAGGAGTaGTTGGGGTGGCAGCCACAG +
Preference number: 4 (lower is better)
Translates to: GSGFICIRRRRGLPASCRRAPQE*LGWQPQ
Trigger: CTGTGGCTGCCACCCCAAGCACTCCTGGGGCGCCCT...CCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGATAAACCCACTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000443147.5
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR GCA 90 bp GGGCCTGCCGGCCTCGTGCCGGAGGACACGGAACTTCACGCCAGCCGCCAGCCTCGCCAGCTGAGCTGGTaGCACCCTGGCAGAGCAGAT +
Preference number: 4 (lower is better)
Translates to: GPAGLVPEDTELHASRQPRQLSW*HPGRAD
Trigger: ATCTGCTCTGCCAGGGTGGCACCAGCTCAGCTGGCG...AGGCTGGCGGCTGGCGTGAAGTTCCGTGTCCTCCGGCACGAGGCCGGCAGGCCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR GCA 90 bp GCAGCAGGTGGGAAGCGGGTCCCAAGGCAGGCAGTGCCAGTGATGGAGTGCGGCGGCCGCAGGACCTGCTaGTACGGGGCACCGTGGACG +
Preference number: 4 (lower is better)
Translates to: AAGGKRVPRQAVPVMECGGRRTC*YGAPWT
Trigger: CGTCCACGGTGCCCCGTAGCAGCAGGTCCTGCGGCC...GCCGCACTCCATCACTGGCACTGCCTGCCTTGGGACCCGCTTCCCACCTGCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp GGGTTTATCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGAGGACAGGCCGCAGGACCTGCTaGTACGGGGCACCGTGGACG +
Preference number: 4 (lower is better)
Translates to: GFICIRRRRGLPASCRRTGRRTC*YGAPWT
Trigger: CGTCCACGGTGCCCCGTAGCAGCAGGTCCTGCGGCC...TGTCCTCCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGATAAACCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp GGCCTCGTGCCGGAGGACACGGAACTTCACGCCAGCCGCCAGCCTGTAGGGCCGCCCGCACCCAGACCGTaGCGTCTGGCAGGCACTTTC +
Preference number: 4 (lower is better)
Translates to: GLVPEDTELHASRQPVGPPAPRP*RLAGTF
Trigger: GAAAGTGCCTGCCAGACGGCACGGTCTGGGTGCGGG...CGGCCCTACAGGCTGGCGGCTGGCGTGAAGTTCCGTGTCCTCCGGCACGAGGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp GGGCAGTGGGTTTATCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGGCCTGCCGGCCTCGTaGCGGAGGACACGGAACTTC +
Preference number: 4 (lower is better)
Translates to: GQWVYLHQEAEGPAGLVPGLPAS*RRTRNF
Trigger: GAAGTTCCGTGTCCTCCGGCACGAGGCCGGCAGGCC...CGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGATAAACCCACTGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443147.5
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR GCA 90 bp CACCAGTGTCCTCAGGCCCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGGGATGGTGGCCGCCCTaGTGGCTCCTAGTGCCTCTG +
Preference number: 4 (lower is better)
Translates to: HQCPQALHQEAEGPAGLVGWWPP*WLLVPL
Trigger: CAGAGGCACTAGGAGCCAGCAGGGCGGCCACCATCC...CACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGGGCCTGAGGACACTGGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420990.6
CDS-3UTR CCA 90 bp GTGCCGTCTGGCAGGCACTTTCGGCCTCAGTGCCACGGCCCCCTCCCCAGGCCACGCAGCCAGGGCTCATaGGGGAAGACAGCACCCAGG +
Preference number: 4 (lower is better)
Translates to: VPSGRHFRPQCHGPLPRPRSQGS*GKTAPR
Trigger: CCTGGGTGCTGTCTTCCCCCATGAGCCCTGGCTGCG...TGGCCTGGGGAGGGGGCCGTGGCACTGAGGCCGAAAGTGCCTGCCAGACGGCAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000636657.1
CDS-3UTR CCA 90 bp GTTGGCCTTCCTGGAAGGGAGGTCCGGCCCGGCCGGCATGAGGGTGGCCAGCACCGCAGCCAGGGCTCATaGGGGAAGACAGCACCCAGG +
Preference number: 4 (lower is better)
Translates to: VGLPGREVRPGRHEGGQHRSQGS*GKTAPR
Trigger: CCTGGGTGCTGTCTTCCCCCATGAGCCCTGGCTGCG...GTGCTGGCCACCCTCATGCCGGCCGGGCCGGACCTCCCTTCCAGGAAGGCCAAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470411.2
CDS-3UTR CCA 90 bp GCACCTGCAGGCTCCCCTCCTGAAGCGGACTCGGGCTCACAGGGAACACCCGCAGTGGGCGCTTGCCGGTaGGTGGCCTCGCAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: APAGSPPEADSGSQGTPAVGACR*VASQLQ
Trigger: CTGGAGCTGCGAGGCCACCCACCGGCAAGCGCCCAC...TGCGGGTGTTCCCTGTGAGCCCGAGTCCGCTTCAGGAGGGGAGCCTGCAGGTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp TTTATCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGAGGACACGGCCGTGCTGGCAGTGGTaGCTCCAGCCTGGCGGTCGG +
Preference number: 4 (lower is better)
Translates to: FICIRRRRGLPASCRRTRPCWQW*LQPGGR
Trigger: CCGACCGCCAGGCTGGAGCCACCACTGCCAGCACGG...CCGTGTCCTCCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGATAAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443147.5
CDS-3UTR CCA 90 bp GTCCAGCAGCACAGAGGCCACCGTGTTGGCCTTCCTGGAAGGGAGGTCCGGCCCCCCCCGTGCTGGCAGTaGTGGCTCCAGCCTGGCGGT +
Preference number: 4 (lower is better)
Translates to: VQQHRGHRVGLPGREVRPPPCWQ*WLQPGG
Trigger: ACCGCCAGGCTGGAGCCACCACTGCCAGCACGGGGG...GGGCCGGACCTCCCTTCCAGGAAGGCCAACACGGTGGCCTCTGTGCTGCTGGAC
70% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470411.2
CDS-3UTR CCA 90 bp CCTCCACAGAGGCCCGAGGGTGGGCCAAAGAGTCAGGTACCACCCCCAGCAGGACCCTCCGACTGCCAGTaGCTCAGCCGCACGGGGCCC +
Preference number: 4 (lower is better)
Translates to: PPQRPEGGPKSQVPPPAGPSDCQ*LSRTGP
Trigger: GGGCCCCGTGCGGCTGAGCCACTGGCAGTCGGAGGG...TCCTGCTGGGGGTGGTACCTGACTCTTTGGCCCACCCTCGGGCCTCTGTGGAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR CCA 90 bp AGCAGATGGCTGGCTGTGGCCGTGTGGTGGTGCCAGGCGAGCCAGCAGTTCCCTCCCTCCGACTGCCAGTaGCTCAGCCGCACGGGGCCC +
Preference number: 4 (lower is better)
Translates to: SRWLAVAVWWCQASQQFPPSDCQ*LSRTGP
Trigger: GGGCCCCGTGCGGCTGAGCCACTGGCAGTCGGAGGG...AGGGAACTGCTGGCTCGCCTGGCACCACCACACGGCCACAGCCAGCCATCTGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443147.5
ENST00000636657.1
CDS-3UTR CCA 90 bp CCTCCTGAAGCGGACTCGGGCTCACAGGGAACACCCGCACCCAGACCGTGCCGTGTCCCGAGGCTCGCCTaGCCAGCTCCGCGAGGATGC +
Preference number: 4 (lower is better)
Translates to: PPEADSGSQGTPAPRPCRVPRLA*PAPRGC
Trigger: GCATCCTCGCGGAGCTGGCCAGGCGAGCCTCGGGAC...ACGGCACGGTCTGGGTGCGGGTGTTCCCTGTGAGCCCGAGTCCGCTTCAGGAGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000636657.1
CDS-3UTR CCA 90 bp GGTGCTGCTGAGATGGGCGCTGCCTCCTCCCACCCACAGCGCGTCATCCCCTCAGTCCCGAGGCTCGCCTaGCCAGCTCCGCGAGGATGC +
Preference number: 4 (lower is better)
Translates to: GAAEMGAASSHPQRVIPSVPRLA*PAPRGC
Trigger: GCATCCTCGCGGAGCTGGCCAGGCGAGCCTCGGGAC...TGAGGGGATGACGCGCTGTGGGTGGGAGGAGGCAGCGCCCATCTCAGCAGCACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000636657.1
CDS-3UTR CCA 90 bp GGGGCCTGCCGGCCTCGTGCCGGAGGACACGGAACTTCACGCCAGCCGCCAGCCGCCTTCCTCATCAGCTaGGCAGGGTTCTCCGCCTTC +
Preference number: 4 (lower is better)
Translates to: GACRPRAGGHGTSRQPPAAFLIS*AGFSAF
Trigger: GAAGGCGGAGAACCCTGCCCAGCTGATGAGGAAGGC...GGCTGGCGGCTGGCGTGAAGTTCCGTGTCCTCCGGCACGAGGCCGGCAGGCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
ENST00000637468.1
CDS-3UTR CCA 90 bp AGGCGGAGGGGCCTGCCGGCCTCGTGCCGGAGGACACGGAACTTCACGCCAGCCAGCTCCTCGGCCACGTaGTCAGCCACAGGAACGAGG +
Preference number: 4 (lower is better)
Translates to: RRRGLPASCRRTRNFTPASSSAT*SATGTR
Trigger: CCTCGTTCCTGTGGCTGACCACGTGGCCGAGGAGCT...GGCTGGCGTGAAGTTCCGTGTCCTCCGGCACGAGGCCGGCAGGCCCCTCCGCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
ENST00000637468.1
CDS-3UTR CCA 90 bp CGTGCCGTCTGGCAGGCACTTTCGGCCTCAGTGCCACGGCCCCCTCCCCAGGCCAGGTCCACGAGCAGATaGATCAGGCCCTGCACGGCG +
Preference number: 4 (lower is better)
Translates to: RAVWQALSASVPRPPPQARSTSR*IRPCTA
Trigger: CGCCGTGCAGGGCCTGATCCATCTGCTCGTGGACCT...GGCCTGGGGAGGGGGCCGTGGCACTGAGGCCGAAAGTGCCTGCCAGACGGCACG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp CAGGCAGTCCTGGTGCTGCTGAGATGGGCGCTGCCTCCTCCCACCCACAGCGCGCGCCCCAGGAGTGCTTaGGGTGGCAGCCACAGCTGG +
Preference number: 4 (lower is better)
Translates to: QAVLVLLRWALPPPTHSARPRSA*GGSHSW
Trigger: CCAGCTGTGGCTGCCACCCCAAGCACTCCTGGGGCG...CGCGCTGTGGGTGGGAGGAGGCAGCGCCCATCTCAGCAGCACCAGGACTGCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp GGGCAGTGGGTTTATCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGCGCCCCAGGAGTGCTTaGGGTGGCAGCCACAGCTGG +
Preference number: 4 (lower is better)
Translates to: GQWVYLHQEAEGPAGLVPRPRSA*GGSHSW
Trigger: CCAGCTGTGGCTGCCACCCCAAGCACTCCTGGGGCG...CGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGATAAACCCACTGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000443147.5
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR CCA 90 bp CTCGTGCCGGAGGACACGGAACTTCACGCCAGCCGCCAGCCTGTAGGGCCGGCAGCTGTGGCCGTGTGGTaGTGCCAGGCGAGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: LVPEDTELHASRQPVGPAAVAVW*CQASQQ
Trigger: CTGCTGGCTCGCCTGGCACCACCACACGGCCACAGC...TGCCGGCCCTACAGGCTGGCGGCTGGCGTGAAGTTCCGTGTCCTCCGGCACGAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR CCA 90 bp GGGCAGTGGGTTTATCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGCTGGCTGTGGCCGTGTaGTGGTGCCAGGCGAGCCAG +
Preference number: 4 (lower is better)
Translates to: GQWVYLHQEAEGPAGLVPLAVAV*WCQASQ
Trigger: CTGGCTCGCCTGGCACCACCACACGGCCACAGCCAG...CGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGATAAACCCACTGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443147.5
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR CCA 90 bp CCTGCAGGCTCCCCTCCTGAAGCGGACTCGGGCTCACAGGGAACACCCGCACCCTGCGGCCAGCCTGGCTaGCCACCCCCACATCTGCTC +
Preference number: 4 (lower is better)
Translates to: PAGSPPEADSGSQGTPAPCGQPG*PPPHLL
Trigger: GAGCAGATGTGGGGGTGGCCAGCCAGGCTGGCCGCA...GGGTGCGGGTGTTCCCTGTGAGCCCGAGTCCGCTTCAGGAGGGGAGCCTGCAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp GTGCCGTCTGGCAGGCACTTTCGGCCTCAGTGCCACGGCCCCCTCCCCAGGCCAGGTGACCGCAGCAGGTaGGAAGCGGGTCCCAAGGCA +
Preference number: 4 (lower is better)
Translates to: VPSGRHFRPQCHGPLPRPGDRSR*EAGPKA
Trigger: TGCCTTGGGACCCGCTTCCCACCTGCTGCGGTCACC...TGGCCTGGGGAGGGGGCCGTGGCACTGAGGCCGAAAGTGCCTGCCAGACGGCAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp GTGCCGTCTGGCAGGCACTTTCGGCCTCAGTGCCACGGCCCCCTCCCCAGGCCACACCTGGGGCTGCTGTaGTGGACGGACCCTCTGGAC +
Preference number: 4 (lower is better)
Translates to: VPSGRHFRPQCHGPLPRPHLGLL*WTDPLD
Trigger: GTCCAGAGGGTCCGTCCACCACAGCAGCCCCAGGTG...TGGCCTGGGGAGGGGGCCGTGGCACTGAGGCCGAAAGTGCCTGCCAGACGGCAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp CTCGTGCCGGAGGACACGGAACTTCACGCCAGCCGCCAGCCTGTAGGGCCGGCAGACCAGCCCTCCACCTaGGGCTGCTGTGGTGGACGG +
Preference number: 4 (lower is better)
Translates to: LVPEDTELHASRQPVGPADQPST*GCCGGR
Trigger: CCGTCCACCACAGCAGCCCCAGGTGGAGGGCTGGTC...TGCCGGCCCTACAGGCTGGCGGCTGGCGTGAAGTTCCGTGTCCTCCGGCACGAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp GGCAGTGGGTTTATCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGGACCAGCCCTCCACCTaGGGCTGCTGTGGTGGACGG +
Preference number: 4 (lower is better)
Translates to: GSGFICIRRRRGLPASCRDQPST*GCCGGR
Trigger: CCGTCCACCACAGCAGCCCCAGGTGGAGGGCTGGTC...CCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGATAAACCCACTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000635205.1
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp ATCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGAGGACACGGAACGCCGCGCTTGGCCCCTaGCCTGCAGTTCAGACTCCC +
Preference number: 4 (lower is better)
Translates to: ICIRRRRGLPASCRRTRNAALGP*PAVQTP
Trigger: GGGAGTCTGAACTGCAGGCCAGGGGCCAAGCGCGGC...GTTCCGTGTCCTCCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443147.5
CDS-3UTR CCA 90 bp AGTGTCCTCAGGCCCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGGGAACTTCACGCCAGTaGATGGTGGCCGCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: SVLRPCIRRRRGLPASCRGTSRQ*MVAALL
Trigger: CAGCAGGGCGGCCACCATCCACTGGCGTGAAGTTCC...CCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGGGCCTGAGGACACT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420990.6
CDS-3UTR TCA 90 bp GTGGGTTTATCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGAGGAGCCAGGACAGCAGCATaGGGCCCAGGGCCACGTCCA +
Preference number: 4 (lower is better)
Translates to: VGLSASGGGGACRPRAGGARTAA*GPGPRP
Trigger: TGGACGTGGCCCTGGGCCTCATGCTGCTGTCCTGGC...TCCTCCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGATAAACCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443147.5
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
ENST00000637468.1
CDS-3UTR TCA 90 bp GTCCACTCACGTCAGCCACAGGAACGAGGGCGTCGGCCAGATGCCCGATGCGGCGCCAGGACAGCAGCATaGGGCCCAGGGCCACGTCCA +
Preference number: 4 (lower is better)
Translates to: VHSRQPQERGRRPDARCGARTAA*GPGPRP
Trigger: TGGACGTGGCCCTGGGCCTCATGCTGCTGTCCTGGC...GCCGCATCGGGCATCTGGCCGACGCCCTCGTTCCTGTGGCTGACGTGAGTGGAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470411.2
CDS-3UTR TCA 90 bp CCTGCAGGCTCCCCTCCTGAAGCGGACTCGGGCTCACAGGGAACACCCGCACCCGTGCACGGTTCATCTTaGGCCCGGCGGGAGCACCCA +
Preference number: 4 (lower is better)
Translates to: PAGSPPEADSGSQGTPAPVHGSS*ARREHP
Trigger: TGGGTGCTCCCGCCGGGCTCAAGATGAACCGTGCAC...GGGTGCGGGTGTTCCCTGTGAGCCCGAGTCCGCTTCAGGAGGGGAGCCTGCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR TCA 90 bp CCCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGAGGACACGGAACGAGCCGAAGACCCAGTaGGTACAGCGGCAGGGAGTT +
Preference number: 4 (lower is better)
Translates to: PCIRRRRGLPASCRRTRNEPKTQ*VQRQGV
Trigger: AACTCCCTGCCGCTGTACTCACTGGGTCTTCGGCTC...GTTCCGTGTCCTCCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420990.6
CDS-3UTR TCA 90 bp CACCCGCACCCAGACCGTGCCGTCTGGCAGGCACTTTCGGCCTCAGTGCCACGGAGGACATGCGCCAGCTaGGCTGGTGCCACCCTGGCA +
Preference number: 4 (lower is better)
Translates to: HPHPDRAVWQALSASVPRRTCAS*AGATLA
Trigger: TGCCAGGGTGGCACCAGCTCAGCTGGCGCATGTCCT...CCGTGGCACTGAGGCCGAAAGTGCCTGCCAGACGGCACGGTCTGGGTGCGGGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR TCA 90 bp CCGCCAGCCTGTAGGGCCGGCAGAGCCGAAGACCCAGTGAGTACAGCGGCAGGGAGGACATGCGCCAGCTaGGCTGGTGCCACCCTGGCA +
Preference number: 4 (lower is better)
Translates to: PPACRAGRAEDPVSTAAGRTCAS*AGATLA
Trigger: TGCCAGGGTGGCACCAGCTCAGCTGGCGCATGTCCT...CCCTGCCGCTGTACTCACTGGGTCTTCGGCTCTGCCGGCCCTACAGGCTGGCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR TCA 90 bp GGCTCCCCTCCTGAAGCGGACTCGGGCTCACAGGGAACACCCGCACCCAGACCGTGCTCGCCACCATGGTaGCCGCAGCAGGTGGGAAGC +
Preference number: 4 (lower is better)
Translates to: GSPPEADSGSQGTPAPRPCSPPW*PQQVGS
Trigger: GCTTCCCACCTGCTGCGGTCACCATGGTGGCGAGCA...CGGTCTGGGTGCGGGTGTTCCCTGTGAGCCCGAGTCCGCTTCAGGAGGGGAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR TCA 90 bp GGGCAGTGGGTTTATCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGTGCTCGCCACCATGGTaGCCGCAGCAGGTGGGAAGC +
Preference number: 4 (lower is better)
Translates to: GQWVYLHQEAEGPAGLVPCSPPW*PQQVGS
Trigger: GCTTCCCACCTGCTGCGGTCACCATGGTGGCGAGCA...CGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGATAAACCCACTGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR TCA 90 bp CCGTGGACGAATAGGTACGGCTGGGTCAGTGGGCGGGCCCTTGACACTGAGGCTGTGTGGTTCAGGGAGTaGGGGCCCGGGCCCGCTGGG +
Preference number: 4 (lower is better)
Translates to: PWTNRYGWVSGRALDTEAVWFRE*GPGPAG
Trigger: CCCAGCGGGCCCGGGCCCTCACTCCCTGAACCACAC...AGCCTCAGTGTCAAGGGCCCGCCCACTGACCCAGCCGTACCTATTCGTCCACGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR TCA 90 bp TGGTGCCAGGCGAGCCAGCAGTTCCCTCAGTCCTGCTTGTCCCCTCTCTGCCTCGTGTGGTTCAGGGAGTaGGGGCCCGGGCCCGCTGGG +
Preference number: 4 (lower is better)
Translates to: WCQASQQFPQSCLSPLCLVWFRE*GPGPAG
Trigger: CCCAGCGGGCCCGGGCCCTCACTCCCTGAACCACAC...GAGGCAGAGAGGGGACAAGCAGGACTGAGGGAACTGCTGGCTCGCCTGGCACCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635909.1
ENST00000636657.1
CDS-3UTR TCA 90 bp GCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGAGGACACGGAACTTCACAGTCCTGGTGCTGCTaGGATGGGCGCTGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: ASGGGGACRPRAGGHGTSQSWCC*DGRCLL
Trigger: GAGGAGGCAGCGCCCATCTCAGCAGCACCAGGACTG...TGAAGTTCCGTGTCCTCCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp GTGGCCGTGTGGTGGTGCCAGGCGAGCCAGCAGTTCCCTCAGTCCTGCTTGTCCACCACGGCGCTGCTCTaGTCCGGCACCCACCGTCCC +
Preference number: 4 (lower is better)
Translates to: VAVWWCQASQQFPQSCLSTTALL*SGTHRP
Trigger: GGGACGGTGGGTGCCGGAGCAGAGCAGCGCCGTGGT...GGACAAGCAGGACTGAGGGAACTGCTGGCTCGCCTGGCACCACCACACGGCCAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443147.5
ENST00000636657.1
CDS-3UTR GCA 90 bp GAGTGCGGCCAGCCTGGCTGGCCACCCCCACATCTGCTCACTCCCAATGACCTCCCAGGACCACGGCGCTaGTCTGCTCCGGCACCCACC +
Preference number: 4 (lower is better)
Translates to: ECGQPGWPPPHLLTPNDLPGPRR*SAPAPT
Trigger: GGTGGGTGCCGGAGCAGAGCAGCGCCGTGGTCCTGG...GAGGTCATTGGGAGTGAGCAGATGTGGGGGTGGCCAGCCAGGCTGGCCGCACTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321878.10
ENST00000636657.1
CDS-3UTR GCA 90 bp CCGTGTGGTGGTGCCAGGCGAGCCAGCAGTTCCCTCAGTCCTGCTTGTCCCCTCCCAGGACCACGGCGCTaGTCTGCTCCGGCACCCACC +
Preference number: 4 (lower is better)
Translates to: PCGGARRASSSLSPACPLPGPRR*SAPAPT
Trigger: GGTGGGTGCCGGAGCAGAGCAGCGCCGTGGTCCTGG...GAGGGGACAAGCAGGACTGAGGGAACTGCTGGCTCGCCTGGCACCACCACACGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443147.5
ENST00000636657.1
CDS-3UTR GCA 90 bp AATAGGTACGGCTGGGTCAGTGGGCGGGCCCTTGACACTGAGGCTGCTCCCGCCGGCAGTGGCACCAGGTaGCCAGCACGGCCACGCCCA +
Preference number: 4 (lower is better)
Translates to: NRYGWVSGRALDTEAAPAGSGTR*PARPRP
Trigger: TGGGCGTGGCCGTGCTGGGCACCTGGTGCCACTGCC...GGCGGGAGCAGCCTCAGTGTCAAGGGCCCGCCCACTGACCCAGCCGTACCTATT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000636657.1
CDS-3UTR GCA 90 bp CCTCCACAGAGGCCCGAGGGTGGGCCAAAGAGTCAGGTACCACCCCCAGCAGGAGGCAGTGGCACCAGGTaGCCAGCACGGCCACGCCCA +
Preference number: 4 (lower is better)
Translates to: PPQRPEGGPKSQVPPPAGGSGTR*PARPRP
Trigger: TGGGCGTGGCCGTGCTGGGCACCTGGTGCCACTGCC...TCCTGCTGGGGGTGGTACCTGACTCTTTGGCCCACCCTCGGGCCTCTGTGGAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR GCA 90 bp ATGGCTGGCTGTGGCCGTGTGGTGGTGCCAGGCGAGCCAGCAGTTCCCTCAGTCGGCAGTGGCACCAGGTaGCCAGCACGGCCACGCCCA +
Preference number: 4 (lower is better)
Translates to: MAGCGRVVVPGEPAVPSVGSGTR*PARPRP
Trigger: TGGGCGTGGCCGTGCTGGGCACCTGGTGCCACTGCC...GACTGAGGGAACTGCTGGCTCGCCTGGCACCACCACACGGCCACAGCCAGCCAT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443147.5
ENST00000636657.1
CDS-3UTR GCA 90 bp GGACTCGGGCTCACAGGGAACACCCGCACCCAGACCGTGCCGTCTGGCAGGCACCGCAGCTCCAGAACGTaGCGCCTCTCTCCCGGCACA +
Preference number: 4 (lower is better)
Translates to: GLGLTGNTRTQTVPSGRHRSSRT*RLSPGT
Trigger: TGTGCCGGGAGAGAGGCGGCACGTTCTGGAGCTGCG...GTGCCTGCCAGACGGCACGGTCTGGGTGCGGGTGTTCCCTGTGAGCCCGAGTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp GCAGGCTCCCCTCCTGAAGCGGACTCGGGCTCACAGGGAACACCCGCACCCAGATCCACGCCCTCCGACTaGCAGTGGCTCAGCCGCACG +
Preference number: 4 (lower is better)
Translates to: AGSPPEADSGSQGTPAPRSTPSD*QWLSRT
Trigger: CGTGCGGCTGAGCCACTGGCAGTCGGAGGGCGTGGA...TCTGGGTGCGGGTGTTCCCTGTGAGCCCGAGTCCGCTTCAGGAGGGGAGCCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000636657.1
CDS-3UTR GCA 90 bp CCTGCAGGCTCCCCTCCTGAAGCGGACTCGGGCTCACAGGGAACACCCGCACCCAGGTGCTCCAGCCGGTaGCGGAGCTGTTCGCACGTG +
Preference number: 4 (lower is better)
Translates to: PAGSPPEADSGSQGTPAPRCSSR*RSCSHV
Trigger: CACGTGCGAACAGCTCCGGCACCGGCTGGAGCACCT...GGGTGCGGGTGTTCCCTGTGAGCCCGAGTCCGCTTCAGGAGGGGAGCCTGCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp TCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGAGGACACGGAACTAGGTGCTCCAGCCGGTaGCGGAGCTGTTCGCACGTG +
Preference number: 4 (lower is better)
Translates to: SASGGGGACRPRAGGHGTRCSSR*RSCSHV
Trigger: CACGTGCGAACAGCTCCGGCACCGGCTGGAGCACCT...AGTTCCGTGTCCTCCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443147.5
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
ENST00000637468.1
CDS-3UTR GCA 90 bp CAGGCAGTCCTGGTGCTGCTGAGATGGGCGCTGCCTCCTCCCACCCACAGCGCGAGGTGCTCCAGCCGGTaGCGGAGCTGTTCGCACGTG +
Preference number: 4 (lower is better)
Translates to: QAVLVLLRWALPPPTHSARCSSR*RSCSHV
Trigger: CACGTGCGAACAGCTCCGGCACCGGCTGGAGCACCT...CGCGCTGTGGGTGGGAGGAGGCAGCGCCCATCTCAGCAGCACCAGGACTGCCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp CGCAGCAGGTGGGAAGCGGGTCCCAAGGCAGGCAGTGCCAGTGATGGAGTGCGGCGGCCAGATGCCCGATaGGGCTTCTCCCGTGGAGCC +
Preference number: 4 (lower is better)
Translates to: RSRWEAGPKAGSASDGVRRPDAR*GFSRGA
Trigger: GGCTCCACGGGAGAAGCCGCATCGGGCATCTGGCCG...CCGCACTCCATCACTGGCACTGCCTGCCTTGGGACCCGCTTCCCACCTGCTGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321878.10
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR GCA 90 bp ACGAGCAGATGGATCAGGCCCTGCACGGCGACCACCAGGAGCCGGAGCAGGGTGCGGCCAGATGCCCGATaGGGCTTCTCCCGTGGAGCC +
Preference number: 4 (lower is better)
Translates to: TSRWIRPCTATTRSRSRVRPDAR*GFSRGA
Trigger: GGCTCCACGGGAGAAGCCGCATCGGGCATCTGGCCG...CACCCTGCTCCGGCTCCTGGTGGTCGCCGTGCAGGGCCTGATCCATCTGCTCGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000635909.1
ENST00000636657.1
ENST00000638143.1
CDS-3UTR GCA 90 bp CTGCAGAGGAGGGGGCTGCACCCGGCTGGAAACGGGGCACAGACCATGCAGGGAAGGGCGTCGGCCAGATaGCCGATGCGGCTTCTCCCG +
Preference number: 4 (lower is better)
Translates to: LQRRGLHPAGNGAQTMQGRASAR*PMRLLP
Trigger: CGGGAGAAGCCGCATCGGGCATCTGGCCGACGCCCT...TCCCTGCATGGTCTGTGCCCCGTTTCCAGCCGGGTGCAGCCCCCTCCTCTGCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR GCA 90 bp TTTATCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGAGGACACGGAGGGCGTCGGCCAGATaGCCGATGCGGCTTCTCCCG +
Preference number: 4 (lower is better)
Translates to: FICIRRRRGLPASCRRTRRASAR*PMRLLP
Trigger: CGGGAGAAGCCGCATCGGGCATCTGGCCGACGCCCT...CCGTGTCCTCCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGATAAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443147.5
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
ENST00000637468.1
CDS-3UTR GCA 90 bp TCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGAGGACACGGAACTTCACGCAGATGGATCAGGCCCTaGACGGCGACCACCAGGAGC +
Preference number: 4 (lower is better)
Translates to: SGGGGACRPRAGGHGTSRRWIRP*TATTRS
Trigger: GCTCCTGGTGGTCGCCGTGCAGGGCCTGATCCATCT...GCGTGAAGTTCCGTGTCCTCCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
ENST00000637468.1
CDS-3UTR GCA 90 bp GGGTTTATCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGAGGACAAGGGCGCCCCAGGAGTaGTTGGGGTGGCAGCCACAG +
Preference number: 4 (lower is better)
Translates to: GFICIRRRRGLPASCRRTRAPQE*LGWQPQ
Trigger: CTGTGGCTGCCACCCCAAGCACTCCTGGGGCGCCCT...TGTCCTCCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGATAAACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000443147.5
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR GCA 90 bp AAGCGGGTCCCAAGGCAGGCAGTGCCAGTGATGGAGTGCGGCCAGCCTGGCTGGAGGGCGCCCCAGGAGTaGTTGGGGTGGCAGCCACAG +
Preference number: 4 (lower is better)
Translates to: KRVPRQAVPVMECGQPGWRAPQE*LGWQPQ
Trigger: CTGTGGCTGCCACCCCAAGCACTCCTGGGGCGCCCT...CCAGCCAGGCTGGCCGCACTCCATCACTGGCACTGCCTGCCTTGGGACCCGCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321878.10
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR GCA 90 bp GGTGCTGCTGAGATGGGCGCTGCCTCCTCCCACCCACAGCGCGTCATCCCCTCACCCCAAGGAACAGCTTaGGGCACAGGGCGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: GAAEMGAASSHPQRVIPSPQGTA*GTGRPR
Trigger: CCTGGGGCGCCCTGTGCCGCAAGCTGTTCCTTGGGG...TGAGGGGATGACGCGCTGTGGGTGGGAGGAGGCAGCGCCCATCTCAGCAGCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp AAGCGGGTCCCAAGGCAGGCAGTGCCAGTGATGGAGTGCGGCCAGCCTGGCTGGCCCCAAGGAACAGCTTaGGGCACAGGGCGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: KRVPRQAVPVMECGQPGWPQGTA*GTGRPR
Trigger: CCTGGGGCGCCCTGTGCCGCAAGCTGTTCCTTGGGG...CCAGCCAGGCTGGCCGCACTCCATCACTGGCACTGCCTGCCTTGGGACCCGCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321878.10
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR GCA 90 bp GCAGTGGGTTTATCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGACCCCAAGGAACAGCTTaGGGCACAGGGCGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: AVGLSASGGGGACRPRAGPQGTA*GTGRPR
Trigger: CCTGGGGCGCCCTGTGCCGCAAGCTGTTCCTTGGGG...TCCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGATAAACCCACTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000443147.5
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR GCA 90 bp CAGCCGCCAGCCTGTAGGGCCGGCAGAGCCGAAGACCCAGTGAGTACAGCGGCACCCCAAGGAACAGCTTaGGGCACAGGGCGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: QPPACRAGRAEDPVSTAAPQGTA*GTGRPR
Trigger: CCTGGGGCGCCCTGTGCCGCAAGCTGTTCCTTGGGG...TGCCGCTGTACTCACTGGGTCTTCGGCTCTGCCGGCCCTACAGGCTGGCGGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR GCA 90 bp CAGGCAGTCCTGGTGCTGCTGAGATGGGCGCTGCCTCCTCCCACCCACAGCGCGGTGGCCGTGTGGTGGTaGCAGGCGAGCCAGCAGTTC +
Preference number: 4 (lower is better)
Translates to: QAVLVLLRWALPPPTHSAVAVWW*QASQQF
Trigger: GAACTGCTGGCTCGCCTGGCACCACCACACGGCCAC...CGCGCTGTGGGTGGGAGGAGGCAGCGCCCATCTCAGCAGCACCAGGACTGCCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp GGCAGTGGGTTTATCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGGTGCCAGTGATGGAGTaGGGCCAGCCTGGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: GSGFICIRRRRGLPASCRVPVME*GQPGWP
Trigger: TGGCCAGCCAGGCTGGCCGCACTCCATCACTGGCAC...CCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGATAAACCCACTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR GCA 90 bp GCAGGCTCCCCTCCTGAAGCGGACTCGGGCTCACAGGGAACACCCGCACCCAGACCCTCCACCTGGGGCTaGTGTGGTGGACGGACCCTC +
Preference number: 4 (lower is better)
Translates to: AGSPPEADSGSQGTPAPRPSTWG*CGGRTL
Trigger: GAGGGTCCGTCCACCACAGCAGCCCCAGGTGGAGGG...TCTGGGTGCGGGTGTTCCCTGTGAGCCCGAGTCCGCTTCAGGAGGGGAGCCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp GGCTGGCTGTGGCCGTGTGGTGGTGCCAGGCGAGCCAGCAGTTCCCTCAGTCCTCCCTCCACCTGGGGCTaGTGTGGTGGACGGACCCTC +
Preference number: 4 (lower is better)
Translates to: GWLWPCGGARRASSSLSPPSTWG*CGGRTL
Trigger: GAGGGTCCGTCCACCACAGCAGCCCCAGGTGGAGGG...AGGACTGAGGGAACTGCTGGCTCGCCTGGCACCACCACACGGCCACAGCCAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000635205.1
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp ATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGAGGACACGGAACTTCACGTTTGGCCGCAGGACCTaGTGCTACGGGGCACCGTGG +
Preference number: 4 (lower is better)
Translates to: IRRRRGLPASCRRTRNFTFGRRT*CYGAPW
Trigger: CCACGGTGCCCCGTAGCAGCAGGTCCTGCGGCCAAA...CGTGAAGTTCCGTGTCCTCCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp CCTGCAGGCTCCCCTCCTGAAGCGGACTCGGGCTCACAGGGAACACCCGCACCCCCCGCACCCAGACCGTaGCGTCTGGCAGGCACTTTC +
Preference number: 4 (lower is better)
Translates to: PAGSPPEADSGSQGTPAPPAPRP*RLAGTF
Trigger: GAAAGTGCCTGCCAGACGGCACGGTCTGGGTGCGGG...GGGTGCGGGTGTTCCCTGTGAGCCCGAGTCCGCTTCAGGAGGGGAGCCTGCAGG
69% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp GGACTCGGGCTCACAGGGAACACCCGCACCCAGACCGTGCCGTCTGGCAGGCACCCCGCACCCAGACCGTaGCGTCTGGCAGGCACTTTC +
Preference number: 4 (lower is better)
Translates to: GLGLTGNTRTQTVPSGRHPAPRP*RLAGTF
Trigger: GAAAGTGCCTGCCAGACGGCACGGTCTGGGTGCGGG...GTGCCTGCCAGACGGCACGGTCTGGGTGCGGGTGTTCCCTGTGAGCCCGAGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp GTCCTGGTGCTGCTGAGATGGGCGCTGCCTCCTCCCACCCACAGCGCGTCATCCGGCCTGCCGGCCTCGTaGCGGAGGACACGGAACTTC +
Preference number: 4 (lower is better)
Translates to: VLVLLRWALPPPTHSASSGLPAS*RRTRNF
Trigger: GAAGTTCCGTGTCCTCCGGCACGAGGCCGGCAGGCC...GGATGACGCGCTGTGGGTGGGAGGAGGCAGCGCCCATCTCAGCAGCACCAGGAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp TCCACAGAGGCCCGAGGGTGGGCCAAAGAGTCAGGTACCACCCCCAGCAGGAAGGGCCCGGGAAGGCTCTaGTGCCCAGGAGGGGTCCCC +
Preference number: 4 (lower is better)
Translates to: STEARGWAKESGTTPSRKGPGRL*CPGGVP
Trigger: GGGGACCCCTCCTGGGCAGCAGAGCCTTCCCGGGCC...CTTCCTGCTGGGGGTGGTACCTGACTCTTTGGCCCACCCTCGGGCCTCTGTGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR GCA 90 bp GTTGGCCTTCCTGGAAGGGAGGTCCGGCCCGGCCGGCATGAGGGTGGCCAGCACCGCCCCTGGAGTTCCTaGTTCTGGTTCAGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: VGLPGREVRPGRHEGGQHRPWSS*FWFRGG
Trigger: CCCTCCCCTGAACCAGAAGCAGGAACTCCAGGGGCG...GTGCTGGCCACCCTCATGCCGGCCGGGCCGGACCTCCCTTCCAGGAAGGCCAAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470411.2
CDS-3UTR GCA 90 bp CTTCCTGGAAGGGAGGTCCGGCCCGGCCGGCATGAGGGTGGCCAGCACAGCCTGGGCCCAGTGCACACCTaGAGCCCACACAAGACCCAC +
Preference number: 4 (lower is better)
Translates to: LPGREVRPGRHEGGQHSLGPVHT*SPHKTH
Trigger: GTGGGTCTTGTGTGGGCTGCAGGTGTGCACTGGGCC...CAGGCTGTGCTGGCCACCCTCATGCCGGCCGGGCCGGACCTCCCTTCCAGGAAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470411.2
CDS-3UTR CCA 90 bp CATGGGGCAGTGCTCTGGACACCTGGGGTTGCTGTGCTCGCCACCATGGTGACCGGGTCCGGATGGGGTTaGGGACCCCGATGGGCGGGC +
Preference number: 4 (lower is better)
Translates to: HGAVLWTPGVAVLATMVTGSGWG*GPRWAG
Trigger: GCCCGCCCATCGGGGTCCCCAACCCCATCCGGACCC...GGTCACCATGGTGGCGAGCACAGCAACCCCAGGTGTCCAGAGCACTGCCCCATG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000321878.10
ENST00000636657.1
CDS-3UTR CCA 90 bp CTGGCCACAAGCAGGCCCAGTGCACACCTGCAGCCCACACAAGACCCACCCAGTGGGTCCGGATGGGGTTaGGGACCCCGATGGGCGGGC +
Preference number: 4 (lower is better)
Translates to: LATSRPSAHLQPTQDPPSGSGWG*GPRWAG
Trigger: GCCCGCCCATCGGGGTCCCCAACCCCATCCGGACCC...ACTGGGTGGGTCTTGTGTGGGCTGCAGGTGTGCACTGGGCCTGCTTGTGGCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422307.6
CDS-3UTR CCA 90 bp CCTCCTGAAGCGGACTCGGGCTCACAGGGAACACCCGCACCCAGACCGTGCCGTGCGCTTGCCGGTGGGTaGCCTCGCAGCTCCAGAACG +
Preference number: 4 (lower is better)
Translates to: PPEADSGSQGTPAPRPCRALAGG*PRSSRT
Trigger: CGTTCTGGAGCTGCGAGGCCACCCACCGGCAAGCGC...ACGGCACGGTCTGGGTGCGGGTGTTCCCTGTGAGCCCGAGTCCGCTTCAGGAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp GAAGCGGGTCCCAAGGCAGGCAGTGCCAGTGATGGAGTGCGGCCAGCCTGGCTGGCGCTTGCCGGTGGGTaGCCTCGCAGCTCCAGAACG +
Preference number: 4 (lower is better)
Translates to: EAGPKAGSASDGVRPAWLALAGG*PRSSRT
Trigger: CGTTCTGGAGCTGCGAGGCCACCCACCGGCAAGCGC...CAGCCAGGCTGGCCGCACTCCATCACTGGCACTGCCTGCCTTGGGACCCGCTTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp GCCGTGTGGTGGTGCCAGGCGAGCCAGCAGTTCCCTCAGTCCTGCTTGTCCCCTGTGGGCGCTTGCCGGTaGGTGGCCTCGCAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: AVWWCQASQQFPQSCLSPVGACR*VASQLQ
Trigger: CTGGAGCTGCGAGGCCACCCACCGGCAAGCGCCCAC...AGGGGACAAGCAGGACTGAGGGAACTGCTGGCTCGCCTGGCACCACCACACGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443147.5
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp ATGGCTGGCTGTGGCCGTGTGGTGGTGCCAGGCGAGCCAGCAGTTCCCTCAGTCGTGGTGGCTCCAGCCTaGCGGTCGGGCAGGACGGTG +
Preference number: 4 (lower is better)
Translates to: MAGCGRVVVPGEPAVPSVVVAPA*RSGRTV
Trigger: CACCGTCCTGCCCGACCGCCAGGCTGGAGCCACCAC...GACTGAGGGAACTGCTGGCTCGCCTGGCACCACCACACGGCCACAGCCAGCCAT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443147.5
CDS-3UTR CCA 90 bp CACAGGGAACACCCGCACCCAGACCGTGCCGTCTGGCAGGCACTTTCGGCCTCACCCCCGTGCTGGCAGTaGTGGCTCCAGCCTGGCGGT +
Preference number: 4 (lower is better)
Translates to: HREHPHPDRAVWQALSASPPCWQ*WLQPGG
Trigger: ACCGCCAGGCTGGAGCCACCACTGCCAGCACGGGGG...TGAGGCCGAAAGTGCCTGCCAGACGGCACGGTCTGGGTGCGGGTGTTCCCTGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000026218.9
ENST00000321878.10
CDS-3UTR CCA 90 bp GGCAGTGCTCTGGACACCTGGGGTTGCTGTGCTCGCCACCATGGTGACCGCAGCCCCCCGTGCTGGCAGTaGTGGCTCCAGCCTGGCGGT +
Preference number: 4 (lower is better)
Translates to: GSALDTWGCCARHHGDRSPPCWQ*WLQPGG
Trigger: ACCGCCAGGCTGGAGCCACCACTGCCAGCACGGGGG...GCTGCGGTCACCATGGTGGCGAGCACAGCAACCCCAGGTGTCCAGAGCACTGCC
69% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000321878.10
CDS-3UTR CCA 90 bp GATGGCTGGCTGTGGCCGTGTGGTGGTGCCAGGCGAGCCAGCAGTTCCCTCAGTCCCCCGTGCTGGCAGTaGTGGCTCCAGCCTGGCGGT +
Preference number: 4 (lower is better)
Translates to: DGWLWPCGGARRASSSLSPPCWQ*WLQPGG
Trigger: ACCGCCAGGCTGGAGCCACCACTGCCAGCACGGGGG...ACTGAGGGAACTGCTGGCTCGCCTGGCACCACCACACGGCCACAGCCAGCCATC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443147.5
CDS-3UTR CCA 90 bp CCGTGGACGAATAGGTACGGCTGGGTCAGTGGGCGGGCCCTTGACACTGAGGCTCCCTCCGACTGCCAGTaGCTCAGCCGCACGGGGCCC +
Preference number: 4 (lower is better)
Translates to: PWTNRYGWVSGRALDTEAPSDCQ*LSRTGP
Trigger: GGGCCCCGTGCGGCTGAGCCACTGGCAGTCGGAGGG...AGCCTCAGTGTCAAGGGCCCGCCCACTGACCCAGCCGTACCTATTCGTCCACGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000636657.1
CDS-3UTR CCA 90 bp GGTTTATCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGAGGACACGCTCCGCGAGGATGCTaGCCTCCACGCCCTCCGACT +
Preference number: 4 (lower is better)
Translates to: GLSASGGGGACRPRAGGHAPRGC*PPRPPT
Trigger: AGTCGGAGGGCGTGGAGGCCAGCATCCTCGCGGAGC...GTGTCCTCCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGATAAACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443147.5
ENST00000636657.1
CDS-3UTR CCA 90 bp GGCCTGGCCACAAGCAGGCCCAGTGCACACCTGCAGCCCACACAAGACCCACCCGCTCCGCGAGGATGCTaGCCTCCACGCCCTCCGACT +
Preference number: 4 (lower is better)
Translates to: GLATSRPSAHLQPTQDPPAPRGC*PPRPPT
Trigger: AGTCGGAGGGCGTGGAGGCCAGCATCCTCGCGGAGC...GGGTGGGTCTTGTGTGGGCTGCAGGTGTGCACTGGGCCTGCTTGTGGCCAGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR CCA 90 bp ATGGCTGGCTGTGGCCGTGTGGTGGTGCCAGGCGAGCCAGCAGTTCCCTCAGTCGTCCCGAGGCTCGCCTaGCCAGCTCCGCGAGGATGC +
Preference number: 4 (lower is better)
Translates to: MAGCGRVVVPGEPAVPSVVPRLA*PAPRGC
Trigger: GCATCCTCGCGGAGCTGGCCAGGCGAGCCTCGGGAC...GACTGAGGGAACTGCTGGCTCGCCTGGCACCACCACACGGCCACAGCCAGCCAT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443147.5
ENST00000636657.1
CDS-3UTR CCA 90 bp GTTGGCCTTCCTGGAAGGGAGGTCCGGCCCGGCCGGCATGAGGGTGGCCAGCACCCAACAGCAGGCAAATaGGTCCCGAGGCTCGCCTGG +
Preference number: 4 (lower is better)
Translates to: VGLPGREVRPGRHEGGQHPTAGK*VPRLAW
Trigger: CCAGGCGAGCCTCGGGACCCATTTGCCTGCTGTTGG...GTGCTGGCCACCCTCATGCCGGCCGGGCCGGACCTCCCTTCCAGGAAGGCCAAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470411.2
CDS-3UTR CCA 90 bp CCCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGAGGACACGGAACCAGGAGTCCACGCGCTaGCGCAGAACGTTCCACTTC +
Preference number: 4 (lower is better)
Translates to: PCIRRRRGLPASCRRTRNQESTR*RRTFHF
Trigger: GAAGTGGAACGTTCTGCGCCAGCGCGTGGACTCCTG...GTTCCGTGTCCTCCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420990.6
CDS-3UTR CCA 90 bp GGGCCTGCCGGCCTCGTGCCGGAGGACACGGAACTTCACGCCAGCCGCCAGCCTCAGGAGTCCACGCGCTaGCGCAGAACGTTCCACTTC +
Preference number: 4 (lower is better)
Translates to: GPAGLVPEDTELHASRQPQESTR*RRTFHF
Trigger: GAAGTGGAACGTTCTGCGCCAGCGCGTGGACTCCTG...AGGCTGGCGGCTGGCGTGAAGTTCCGTGTCCTCCGGCACGAGGCCGGCAGGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
ENST00000637468.1
CDS-3UTR CCA 90 bp CACCAGTGTCCTCAGGCCCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGAGGTCCACGAGCAGATaGATCAGGCCCTGCACGGCG +
Preference number: 4 (lower is better)
Translates to: HQCPQALHQEAEGPAGLVRSTSR*IRPCTA
Trigger: CGCCGTGCAGGGCCTGATCCATCTGCTCGTGGACCT...CACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGGGCCTGAGGACACTGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420990.6
CDS-3UTR CCA 90 bp CGGCCTCGTGCCGGAGGACACGGAACTTCACGCCAGCCGCCAGCCTGTAGGGCCAGGTCCACGAGCAGATaGATCAGGCCCTGCACGGCG +
Preference number: 4 (lower is better)
Translates to: RPRAGGHGTSRQPPACRARSTSR*IRPCTA
Trigger: CGCCGTGCAGGGCCTGATCCATCTGCTCGTGGACCT...GGCCCTACAGGCTGGCGGCTGGCGTGAAGTTCCGTGTCCTCCGGCACGAGGCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
ENST00000637468.1
CDS-3UTR CCA 90 bp GCAGTGGGTTTATCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGACGCCCCAGGAGTGCTTaGGGTGGCAGCCACAGCTGG +
Preference number: 4 (lower is better)
Translates to: AVGLSASGGGGACRPRAGRPRSA*GGSHSW
Trigger: CCAGCTGTGGCTGCCACCCCAAGCACTCCTGGGGCG...TCCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGATAAACCCACTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000443147.5
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR CCA 90 bp ACGGAACTTCACGCCAGCCGCCAGCCTGTAGGGCCGGCAGAGCCGAAGACCCAGCGCCCCAGGAGTGCTTaGGGTGGCAGCCACAGCTGG +
Preference number: 4 (lower is better)
Translates to: TELHASRQPVGPAEPKTQRPRSA*GGSHSW
Trigger: CCAGCTGTGGCTGCCACCCCAAGCACTCCTGGGGCG...CTGGGTCTTCGGCTCTGCCGGCCCTACAGGCTGGCGGCTGGCGTGAAGTTCCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR CCA 90 bp GGGTTTATCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGAGGACACTGGCTGTGGCCGTGTaGTGGTGCCAGGCGAGCCAG +
Preference number: 4 (lower is better)
Translates to: GFICIRRRRGLPASCRRTLAVAV*WCQASQ
Trigger: CTGGCTCGCCTGGCACCACCACACGGCCACAGCCAG...TGTCCTCCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGATAAACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443147.5
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR CCA 90 bp GGTTTATCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGAGGACACCTGGCTGTGGCCGTGTaGTGGTGCCAGGCGAGCCAG +
Preference number: 4 (lower is better)
Translates to: GLSASGGGGACRPRAGGHLAVAV*WCQASQ
Trigger: CTGGCTCGCCTGGCACCACCACACGGCCACAGCCAG...GTGTCCTCCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGATAAACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443147.5
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR CCA 90 bp CACCCGCACCCAGACCGTGCCGTCTGGCAGGCACTTTCGGCCTCAGTGCCACGGCCCTGGCAGAGCAGATaGCTGGCTGTGGCCGTGTGG +
Preference number: 4 (lower is better)
Translates to: HPHPDRAVWQALSASVPRPWQSR*LAVAVW
Trigger: CCACACGGCCACAGCCAGCCATCTGCTCTGCCAGGG...CCGTGGCACTGAGGCCGAAAGTGCCTGCCAGACGGCACGGTCTGGGTGCGGGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp GGCTCCCCTCCTGAAGCGGACTCGGGCTCACAGGGAACACCCGCACCCAGACCGCCCTGGCAGAGCAGATaGCTGGCTGTGGCCGTGTGG +
Preference number: 4 (lower is better)
Translates to: GSPPEADSGSQGTPAPRPPWQSR*LAVAVW
Trigger: CCACACGGCCACAGCCAGCCATCTGCTCTGCCAGGG...CGGTCTGGGTGCGGGTGTTCCCTGTGAGCCCGAGTCCGCTTCAGGAGGGGAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp ATCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGAGGACACGGAACCCCTGGCAGAGCAGATaGCTGGCTGTGGCCGTGTGG +
Preference number: 4 (lower is better)
Translates to: ICIRRRRGLPASCRRTRNPWQSR*LAVAVW
Trigger: CCACACGGCCACAGCCAGCCATCTGCTCTGCCAGGG...GTTCCGTGTCCTCCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR CCA 90 bp CCTGGTGCTGCTGAGATGGGCGCTGCCTCCTCCCACCCACAGCGCGTCATCCCCCACCTGGGGCTGCTGTaGTGGACGGACCCTCTGGAC +
Preference number: 4 (lower is better)
Translates to: PGAAEMGAASSHPQRVIPHLGLL*WTDPLD
Trigger: GTCCAGAGGGTCCGTCCACCACAGCAGCCCCAGGTG...GGGGATGACGCGCTGTGGGTGGGAGGAGGCAGCGCCCATCTCAGCAGCACCAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp TCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGAGGACACGGAACTTCACGCGAGGGTGCCTGGGACTaGGGGGTTCATCCTGGCAAG +
Preference number: 4 (lower is better)
Translates to: SGGGGACRPRAGGHGTSREGAWD*GVHPGK
Trigger: CTTGCCAGGATGAACCCCCCAGTCCCAGGCACCCTC...GCGTGAAGTTCCGTGTCCTCCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp CGGCCTCGTGCCGGAGGACACGGAACTTCACGCCAGCCGCCAGCCTGTAGGGCCCCAGACCGTGCCGTCTaGCAGGCACTTTCGGCCTCA +
Preference number: 4 (lower is better)
Translates to: RPRAGGHGTSRQPPACRAPDRAV*QALSAS
Trigger: TGAGGCCGAAAGTGCCTGCCAGACGGCACGGTCTGG...GGCCCTACAGGCTGGCGGCTGGCGTGAAGTTCCGTGTCCTCCGGCACGAGGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp GAGCAGATGGCTGGCTGTGGCCGTGTGGTGGTGCCAGGCGAGCCAGCAGTTCCCCGGCTTCCCCGGTGCTaGGTTGCCAGGGAGTCCCAG +
Preference number: 4 (lower is better)
Translates to: EQMAGCGRVVVPGEPAVPRLPRC*VARESQ
Trigger: CTGGGACTCCCTGGCAACCCAGCACCGGGGAAGCCG...GGGAACTGCTGGCTCGCCTGGCACCACCACACGGCCACAGCCAGCCATCTGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp CTGCAGAGGAGGGGGCTGCACCCGGCTGGAAACGGGGCACAGACCATGCAGGGAGAGCCTCAGCCCGGCTaGCTCCTGCACACAGCCCCT +
Preference number: 4 (lower is better)
Translates to: LQRRGLHPAGNGAQTMQGEPQPG*LLHTAP
Trigger: AGGGGCTGTGTGCAGGAGCCAGCCGGGCTGAGGCTC...TCCCTGCATGGTCTGTGCCCCGTTTCCAGCCGGGTGCAGCCCCCTCCTCTGCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR TCA 90 bp GGACTCGGGCTCACAGGGAACACCCGCACCCAGACCGTGCCGTCTGGCAGGCACGCAGGCACTGACAGCTaGGACCAGCGACAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: GLGLTGNTRTQTVPSGRHAGTDS*DQRQQA
Trigger: AGCCTGCTGTCGCTGGTCTCAGCTGTCAGTGCCTGC...GTGCCTGCCAGACGGCACGGTCTGGGTGCGGGTGTTCCCTGTGAGCCCGAGTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000636657.1
CDS-3UTR TCA 90 bp GGGGCACCGTGGACGAATAGGTACGGCTGGGTCAGTGGGCGGGCCCTTGACACTGCCAGGACAGCAGCATaGGGCCCAGGGCCACGTCCA +
Preference number: 4 (lower is better)
Translates to: GAPWTNRYGWVSGRALDTARTAA*GPGPRP
Trigger: TGGACGTGGCCCTGGGCCTCATGCTGCTGTCCTGGC...AGTGTCAAGGGCCCGCCCACTGACCCAGCCGTACCTATTCGTCCACGGTGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR TCA 90 bp CCTCCACAGAGGCCCGAGGGTGGGCCAAAGAGTCAGGTACCACCCCCAGCAGGAGCCAGGACAGCAGCATaGGGCCCAGGGCCACGTCCA +
Preference number: 4 (lower is better)
Translates to: PPQRPEGGPKSQVPPPAGARTAA*GPGPRP
Trigger: TGGACGTGGCCCTGGGCCTCATGCTGCTGTCCTGGC...TCCTGCTGGGGGTGGTACCTGACTCTTTGGCCCACCCTCGGGCCTCTGTGGAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR TCA 90 bp ACTTCACGCCAGCCGCCAGCCTGTAGGGCCGGCAGAGCCGAAGACCCAGTGAGTGCCAGGACAGCAGCATaGGGCCCAGGGCCACGTCCA +
Preference number: 4 (lower is better)
Translates to: TSRQPPACRAGRAEDPVSARTAA*GPGPRP
Trigger: TGGACGTGGCCCTGGGCCTCATGCTGCTGTCCTGGC...ACTCACTGGGTCTTCGGCTCTGCCGGCCCTACAGGCTGGCGGCTGGCGTGAAGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
ENST00000637468.1
CDS-3UTR TCA 90 bp GTCCTGGTGCTGCTGAGATGGGCGCTGCCTCCTCCCACCCACAGCGCGTCATCCGTGCACGGTTCATCTTaGGCCCGGCGGGAGCACCCA +
Preference number: 4 (lower is better)
Translates to: VLVLLRWALPPPTHSASSVHGSS*ARREHP
Trigger: TGGGTGCTCCCGCCGGGCTCAAGATGAACCGTGCAC...GGATGACGCGCTGTGGGTGGGAGGAGGCAGCGCCCATCTCAGCAGCACCAGGAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR TCA 90 bp GCACCTGCAGGCTCCCCTCCTGAAGCGGACTCGGGCTCACAGGGAACACCCGCAGTGCACGGTTCATCTTaGGCCCGGCGGGAGCACCCA +
Preference number: 4 (lower is better)
Translates to: APAGSPPEADSGSQGTPAVHGSS*ARREHP
Trigger: TGGGTGCTCCCGCCGGGCTCAAGATGAACCGTGCAC...TGCGGGTGTTCCCTGTGAGCCCGAGTCCGCTTCAGGAGGGGAGCCTGCAGGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR TCA 90 bp ACGAGCAGATGGATCAGGCCCTGCACGGCGACCACCAGGAGCCGGAGCAGGGTGGTGCACGGTTCATCTTaGGCCCGGCGGGAGCACCCA +
Preference number: 4 (lower is better)
Translates to: TSRWIRPCTATTRSRSRVVHGSS*ARREHP
Trigger: TGGGTGCTCCCGCCGGGCTCAAGATGAACCGTGCAC...CACCCTGCTCCGGCTCCTGGTGGTCGCCGTGCAGGGCCTGATCCATCTGCTCGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000635909.1
ENST00000636657.1
ENST00000638143.1
CDS-3UTR TCA 90 bp CCTCAGGCCCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGAGGACAGAGCAGAGTCCCGATaGACAGCTGGTCCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: PQALHQEAEGPAGLVPEDRAESR*TAGPGH
Trigger: ATGACCTGGACCAGCTGTTCATCGGGACTCTGCTCT...GTCCTCCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGGGCCTGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420990.6
CDS-3UTR TCA 90 bp CTCGTGCCGGAGGACACGGAACTTCACGCCAGCCGCCAGCCTGTAGGGCCGGCAGGAGCCGGAGCAGGGTaGACACCAGGTAGTACAGGG +
Preference number: 4 (lower is better)
Translates to: LVPEDTELHASRQPVGPAGAGAG*TPGSTG
Trigger: CCCTGTACTACCTGGTGTTCACCCTGCTCCGGCTCC...TGCCGGCCCTACAGGCTGGCGGCTGGCGTGAAGTTCCGTGTCCTCCGGCACGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR TCA 90 bp ATCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGAGGACACGGAACGGAGCCGGAGCAGGGTaGACACCAGGTAGTACAGGG +
Preference number: 4 (lower is better)
Translates to: ICIRRRRGLPASCRRTRNGAGAG*TPGSTG
Trigger: CCCTGTACTACCTGGTGTTCACCCTGCTCCGGCTCC...GTTCCGTGTCCTCCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000443147.5
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR TCA 90 bp CGCAGCAGGTGGGAAGCGGGTCCCAAGGCAGGCAGTGCCAGTGATGGAGTGCGGAGGACATGCGCCAGCTaGGCTGGTGCCACCCTGGCA +
Preference number: 4 (lower is better)
Translates to: RSRWEAGPKAGSASDGVRRTCAS*AGATLA
Trigger: TGCCAGGGTGGCACCAGCTCAGCTGGCGCATGTCCT...CCGCACTCCATCACTGGCACTGCCTGCCTTGGGACCCGCTTCCCACCTGCTGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321878.10
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR TCA 90 bp GAAGCGGGTCCCAAGGCAGGCAGTGCCAGTGATGGAGTGCGGCCAGCCTGGCTGTGCAGGCTCCCCTCCTaGAGCGGACTCGGGCTCACA +
Preference number: 4 (lower is better)
Translates to: EAGPKAGSASDGVRPAWLCRLPS*SGLGLT
Trigger: TGTGAGCCCGAGTCCGCTTCAGGAGGGGAGCCTGCA...CAGCCAGGCTGGCCGCACTCCATCACTGGCACTGCCTGCCTTGGGACCCGCTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR TCA 90 bp CTGAAGCGGACTCGGGCTCACAGGGAACACCCGCACCCAGACCGTGCCGTCTGGCAGTCCTGGTGCTGCTaGGATGGGCGCTGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: LKRTRAHREHPHPDRAVWQSWCC*DGRCLL
Trigger: GAGGAGGCAGCGCCCATCTCAGCAGCACCAGGACTG...CCAGACGGCACGGTCTGGGTGCGGGTGTTCCCTGTGAGCCCGAGTCCGCTTCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR TCA 90 bp GTCCACTCACGTCAGCCACAGGAACGAGGGCGTCGGCCAGATGCCCGATGCGGCCCACACAGACGTGCCTaGTGCTGCCCCCAGAGGCCT +
Preference number: 4 (lower is better)
Translates to: VHSRQPQERGRRPDARCGPHRRA*CCPQRP
Trigger: AGGCCTCTGGGGGCAGCATCAGGCACGTCTGTGTGG...GCCGCATCGGGCATCTGGCCGACGCCCTCGTTCCTGTGGCTGACGTGAGTGGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470411.2
CDS-3UTR GCA 90 bp GGACGAATAGGTACGGCTGGGTCAGTGGGCGGGCCCTTGACACTGAGGCTGCTCACCACGGCGCTGCTCTaGTCCGGCACCCACCGTCCC +
Preference number: 4 (lower is better)
Translates to: GRIGTAGSVGGPLTLRLLTTALL*SGTHRP
Trigger: GGGACGGTGGGTGCCGGAGCAGAGCAGCGCCGTGGT...GAGCAGCCTCAGTGTCAAGGGCCCGCCCACTGACCCAGCCGTACCTATTCGTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000636657.1
CDS-3UTR GCA 90 bp CTTCCTGGAAGGGAGGTCCGGCCCGGCCGGCATGAGGGTGGCCAGCACAGCCTGGGGATGAAGGGAAAGTaGAGGACCGCCAGGACCACG +
Preference number: 4 (lower is better)
Translates to: LPGREVRPGRHEGGQHSLGMKGK*RTARTT
Trigger: CGTGGTCCTGGCGGTCCTGCACTTTCCCTTCATCCC...CAGGCTGTGCTGGCCACCCTCATGCCGGCCGGGCCGGACCTCCCTTCCAGGAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470411.2
CDS-3UTR GCA 90 bp AATAGGTACGGCTGGGTCAGTGGGCGGGCCCTTGACACTGAGGCTGCTCCCGCCCTCTCCTCGGGCTCCTaGCGGCAGTGGCACCAGGTG +
Preference number: 4 (lower is better)
Translates to: NRYGWVSGRALDTEAAPALSSGS*RQWHQV
Trigger: CACCTGGTGCCACTGCCGGCAGGAGCCCGAGGAGAG...GGCGGGAGCAGCCTCAGTGTCAAGGGCCCGCCCACTGACCCAGCCGTACCTATT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000636657.1
CDS-3UTR GCA 90 bp CTGCAGAGGAGGGGGCTGCACCCGGCTGGAAACGGGGCACAGACCATGCAGGGACGCAGCTCCAGAACGTaGCGCCTCTCTCCCGGCACA +
Preference number: 4 (lower is better)
Translates to: LQRRGLHPAGNGAQTMQGRSSRT*RLSPGT
Trigger: TGTGCCGGGAGAGAGGCGGCACGTTCTGGAGCTGCG...TCCCTGCATGGTCTGTGCCCCGTTTCCAGCCGGGTGCAGCCCCCTCCTCTGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR GCA 90 bp TGGACGAATAGGTACGGCTGGGTCAGTGGGCGGGCCCTTGACACTGAGGCTGCTGGGGCAGTGGGCGCTTaGCGGTGGGTGGCCTCGCAG +
Preference number: 4 (lower is better)
Translates to: WTNRYGWVSGRALDTEAAGAVGA*RWVASQ
Trigger: CTGCGAGGCCACCCACCGGCAAGCGCCCACTGCCCC...AGCAGCCTCAGTGTCAAGGGCCCGCCCACTGACCCAGCCGTACCTATTCGTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp ACACAGCAGCGTCCACAAAGCACAGGACATGCGCCAGCTGAGCTGGTGCCACCCGGGGCAGTGGGCGCTTaGCGGTGGGTGGCCTCGCAG +
Preference number: 4 (lower is better)
Translates to: TQQRPQSTGHAPAELVPPGAVGA*RWVASQ
Trigger: CTGCGAGGCCACCCACCGGCAAGCGCCCACTGCCCC...GGGTGGCACCAGCTCAGCTGGCGCATGTCCTGTGCTTTGTGGACGCTGCTGTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp ATGGCTGGCTGTGGCCGTGTGGTGGTGCCAGGCGAGCCAGCAGTTCCCTCAGTCTCCACGCCCTCCGACTaGCAGTGGCTCAGCCGCACG +
Preference number: 4 (lower is better)
Translates to: MAGCGRVVVPGEPAVPSVSTPSD*QWLSRT
Trigger: CGTGCGGCTGAGCCACTGGCAGTCGGAGGGCGTGGA...GACTGAGGGAACTGCTGGCTCGCCTGGCACCACCACACGGCCACAGCCAGCCAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443147.5
ENST00000636657.1
CDS-3UTR GCA 90 bp CCTCCTGAAGCGGACTCGGGCTCACAGGGAACACCCGCACCCAGACCGTGCCGTAGGTGCTCCAGCCGGTaGCGGAGCTGTTCGCACGTG +
Preference number: 4 (lower is better)
Translates to: PPEADSGSQGTPAPRPCRRCSSR*RSCSHV
Trigger: CACGTGCGAACAGCTCCGGCACCGGCTGGAGCACCT...ACGGCACGGTCTGGGTGCGGGTGTTCCCTGTGAGCCCGAGTCCGCTTCAGGAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp GGGTTTATCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGAGGACAAGGTGCTCCAGCCGGTaGCGGAGCTGTTCGCACGTG +
Preference number: 4 (lower is better)
Translates to: GFICIRRRRGLPASCRRTRCSSR*RSCSHV
Trigger: CACGTGCGAACAGCTCCGGCACCGGCTGGAGCACCT...TGTCCTCCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGATAAACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443147.5
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
ENST00000637468.1
CDS-3UTR GCA 90 bp AACACCCGCACCCAGACCGTGCCGTCTGGCAGGCACTTTCGGCCTCAGTGCCACCGGCCAGATGCCCGATaGGGCTTCTCCCGTGGAGCC +
Preference number: 4 (lower is better)
Translates to: NTRTQTVPSGRHFRPQCHRPDAR*GFSRGA
Trigger: GGCTCCACGGGAGAAGCCGCATCGGGCATCTGGCCG...GTGGCACTGAGGCCGAAAGTGCCTGCCAGACGGCACGGTCTGGGTGCGGGTGTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp AGAGCAGATGGCTGGCTGTGGCCGTGTGGTGGTGCCAGGCGAGCCAGCAGTTCCAGGGCGTCGGCCAGATaGCCGATGCGGCTTCTCCCG +
Preference number: 4 (lower is better)
Translates to: RADGWLWPCGGARRASSSRASAR*PMRLLP
Trigger: CGGGAGAAGCCGCATCGGGCATCTGGCCGACGCCCT...GGAACTGCTGGCTCGCCTGGCACCACCACACGGCCACAGCCAGCCATCTGCTCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321878.10
ENST00000443147.5
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR GCA 90 bp AGTCCTGGTGCTGCTGAGATGGGCGCTGCCTCCTCCCACCCACAGCGCGTCATCAGGGCGTCGGCCAGATaGCCGATGCGGCTTCTCCCG +
Preference number: 4 (lower is better)
Translates to: SPGAAEMGAASSHPQRVIRASAR*PMRLLP
Trigger: CGGGAGAAGCCGCATCGGGCATCTGGCCGACGCCCT...GATGACGCGCTGTGGGTGGGAGGAGGCAGCGCCCATCTCAGCAGCACCAGGACT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp GATGGCTGGCTGTGGCCGTGTGGTGGTGCCAGGCGAGCCAGCAGTTCCCTCAGTAGGGCGTCGGCCAGATaGCCGATGCGGCTTCTCCCG +
Preference number: 4 (lower is better)
Translates to: DGWLWPCGGARRASSSLSRASAR*PMRLLP
Trigger: CGGGAGAAGCCGCATCGGGCATCTGGCCGACGCCCT...ACTGAGGGAACTGCTGGCTCGCCTGGCACCACCACACGGCCACAGCCAGCCATC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000443147.5
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR GCA 90 bp CACCCGCACCCAGACCGTGCCGTCTGGCAGGCACTTTCGGCCTCAGTGCCACGGAGCCACTGCAGCAGATaGTGGAGCTCCTCGGCCACG +
Preference number: 4 (lower is better)
Translates to: HPHPDRAVWQALSASVPRSHCSR*WSSSAT
Trigger: CGTGGCCGAGGAGCTCCAGCATCTGCTGCAGTGGCT...CCGTGGCACTGAGGCCGAAAGTGCCTGCCAGACGGCACGGTCTGGGTGCGGGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp CATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGAGGACACGGAACTTCACAGCCACTGCAGCAGATaGTGGAGCTCCTCGGCCACG +
Preference number: 4 (lower is better)
Translates to: HQEAEGPAGLVPEDTELHSHCSR*WSSSAT
Trigger: CGTGGCCGAGGAGCTCCAGCATCTGCTGCAGTGGCT...GTGAAGTTCCGTGTCCTCCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
ENST00000637468.1
CDS-3UTR GCA 90 bp AGTGTCCTCAGGCCCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGCAGCACCTGGTCCAGTaGACGGTTCATCTTGAGCCC +
Preference number: 4 (lower is better)
Translates to: SVLRPCIRRRRGLPASCRQHLVQ*TVHLEP
Trigger: GGGCTCAAGATGAACCGTGCACTGGACCAGGTGCTG...CCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGGGCCTGAGGACACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420990.6
CDS-3UTR GCA 90 bp CCTCAGGCCCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGAGGACACGTGCCAAAGGATGTaGTCCACGAAGGGGGACATG +
Preference number: 4 (lower is better)
Translates to: PQALHQEAEGPAGLVPEDTCQRM*STKGDM
Trigger: CATGTCCCCCTTCGTGGAGCACATCCTTTGGCACGT...GTCCTCCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGGGCCTGAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420990.6
CDS-3UTR GCA 90 bp GGGCAGTGGGTTTATCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGCCGAGAGGCCCACGTaGCAAAGGATGTGCTCCACG +
Preference number: 4 (lower is better)
Translates to: GQWVYLHQEAEGPAGLVPAERPT*QRMCST
Trigger: CGTGGAGCACATCCTTTGGCACGTGGGCCTCTCGGC...CGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGATAAACCCACTGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000443147.5
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR GCA 90 bp TGCCGGCCTCGTGCCGGAGGACACGGAACTTCACGCCAGCCGCCAGCCTGTAGGGCCGAGAGGCCCACGTaGCAAAGGATGTGCTCCACG +
Preference number: 4 (lower is better)
Translates to: CRPRAGGHGTSRQPPACRAERPT*QRMCST
Trigger: CGTGGAGCACATCCTTTGGCACGTGGGCCTCTCGGC...CCTACAGGCTGGCGGCTGGCGTGAAGTTCCGTGTCCTCCGGCACGAGGCCGGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR GCA 90 bp CCTGGTGCTGCTGAGATGGGCGCTGCCTCCTCCCACCCACAGCGCGTCATCCCCGCCGAGAGGCCCACGTaGCAAAGGATGTGCTCCACG +
Preference number: 4 (lower is better)
Translates to: PGAAEMGAASSHPQRVIPAERPT*QRMCST
Trigger: CGTGGAGCACATCCTTTGGCACGTGGGCCTCTCGGC...GGGGATGACGCGCTGTGGGTGGGAGGAGGCAGCGCCCATCTCAGCAGCACCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp TCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGAGGACACGGAACTAGATGGATCAGGCCCTaGACGGCGACCACCAGGAGC +
Preference number: 4 (lower is better)
Translates to: SASGGGGACRPRAGGHGTRWIRP*TATTRS
Trigger: GCTCCTGGTGGTCGCCGTGCAGGGCCTGATCCATCT...AGTTCCGTGTCCTCCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443147.5
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
ENST00000637468.1
CDS-3UTR GCA 90 bp CGGCCCAGCACCTGGTCCAGTGCACGGTTCATCTTGAGCCCGGCGGGAGCACCCAGATGGATCAGGCCCTaGACGGCGACCACCAGGAGC +
Preference number: 4 (lower is better)
Translates to: RPSTWSSARFILSPAGAPRWIRP*TATTRS
Trigger: GCTCCTGGTGGTCGCCGTGCAGGGCCTGATCCATCT...GGGTGCTCCCGCCGGGCTCAAGATGAACCGTGCACTGGACCAGGTGCTGGGCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000635909.1
ENST00000636657.1
ENST00000638143.1
CDS-3UTR GCA 90 bp AGAGCAGATGGCTGGCTGTGGCCGTGTGGTGGTGCCAGGCGAGCCAGCAGTTCCAGGGCGCCCCAGGAGTaGTTGGGGTGGCAGCCACAG +
Preference number: 4 (lower is better)
Translates to: RADGWLWPCGGARRASSSRAPQE*LGWQPQ
Trigger: CTGTGGCTGCCACCCCAAGCACTCCTGGGGCGCCCT...GGAACTGCTGGCTCGCCTGGCACCACCACACGGCCACAGCCAGCCATCTGCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000321878.10
ENST00000443147.5
ENST00000540241.1
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR GCA 90 bp TGGCTGTGGCCGTGTGGTGGTGCCAGGCGAGCCAGCAGTTCCCTCAGTCCTGCTCCCCAAGGAACAGCTTaGGGCACAGGGCGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: WLWPCGGARRASSSLSPAPQGTA*GTGRPR
Trigger: CCTGGGGCGCCCTGTGCCGCAAGCTGTTCCTTGGGG...AGCAGGACTGAGGGAACTGCTGGCTCGCCTGGCACCACCACACGGCCACAGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000443147.5
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR GCA 90 bp GAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGAGGACACGGAACTTCACGCCAGCCAGTTCCCTCAGTCCTaGTTGTCCCCTCTCTGCCTC +
Preference number: 4 (lower is better)
Translates to: EAEGPAGLVPEDTELHASQFPQS*LSPLCL
Trigger: GAGGCAGAGAGGGGACAAGCAGGACTGAGGGAACTG...GCTGGCGTGAAGTTCCGTGTCCTCCGGCACGAGGCCGGCAGGCCCCTCCGCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR GCA 90 bp CAGCCGCCAGCCTGTAGGGCCGGCAGAGCCGAAGACCCAGTGAGTACAGCGGCAGTGGCCGTGTGGTGGTaGCAGGCGAGCCAGCAGTTC +
Preference number: 4 (lower is better)
Translates to: QPPACRAGRAEDPVSTAAVAVWW*QASQQF
Trigger: GAACTGCTGGCTCGCCTGGCACCACCACACGGCCAC...TGCCGCTGTACTCACTGGGTCTTCGGCTCTGCCGGCCCTACAGGCTGGCGGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR GCA 90 bp GAGCAGATGGCTGGCTGTGGCCGTGTGGTGGTGCCAGGCGAGCCAGCAGTTCCCGTGCCAGTGATGGAGTaGGGCCAGCCTGGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: EQMAGCGRVVVPGEPAVPVPVME*GQPGWP
Trigger: TGGCCAGCCAGGCTGGCCGCACTCCATCACTGGCAC...GGGAACTGCTGGCTCGCCTGGCACCACCACACGGCCACAGCCAGCCATCTGCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321878.10
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR GCA 90 bp GAGTGCGGCCAGCCTGGCTGGCCACCCCCACATCTGCTCACTCCCAATGACCTCCCCTCCACCTGGGGCTaGTGTGGTGGACGGACCCTC +
Preference number: 4 (lower is better)
Translates to: ECGQPGWPPPHLLTPNDLPSTWG*CGGRTL
Trigger: GAGGGTCCGTCCACCACAGCAGCCCCAGGTGGAGGG...GAGGTCATTGGGAGTGAGCAGATGTGGGGGTGGCCAGCCAGGCTGGCCGCACTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000321878.10
ENST00000635205.1
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp GGAGGGGCCTGCCGGCCTCGTGCCGGAGGACACGGAACTTCACGCCAGCCGCCAACGGGGGTCAGCGACTaGTTCAATCCCCCAGATGCA +
Preference number: 4 (lower is better)
Translates to: GGACRPRAGGHGTSRQPPTGVSD*FNPPDA
Trigger: TGCATCTGGGGGATTGAAGCAGTCGCTGACCCCCGT...TGGCGGCTGGCGTGAAGTTCCGTGTCCTCCGGCACGAGGCCGGCAGGCCCCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp GGCAGTGCTCTGGACACCTGGGGTTGCTGTGCTCGCCACCATGGTGACCGCAGCGGCCTGCCGGCCTCGTaGCGGAGGACACGGAACTTC +
Preference number: 4 (lower is better)
Translates to: GSALDTWGCCARHHGDRSGLPAS*RRTRNF
Trigger: GAAGTTCCGTGTCCTCCGGCACGAGGCCGGCAGGCC...GCTGCGGTCACCATGGTGGCGAGCACAGCAACCCCAGGTGTCCAGAGCACTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321878.10
ENST00000635205.1
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp AGAGCAGATGGCTGGCTGTGGCCGTGTGGTGGTGCCAGGCGAGCCAGCAGTTCCGGCCTGCCGGCCTCGTaGCGGAGGACACGGAACTTC +
Preference number: 4 (lower is better)
Translates to: RADGWLWPCGGARRASSSGLPAS*RRTRNF
Trigger: GAAGTTCCGTGTCCTCCGGCACGAGGCCGGCAGGCC...GGAACTGCTGGCTCGCCTGGCACCACCACACGGCCACAGCCAGCCATCTGCTCT
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000321878.10
ENST00000443147.5
ENST00000540241.1
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR GCA 90 bp AGGGCAGTGGGTTTATCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGATGGTGGCCGCCCTaGTGGCTCCTAGTGCCTCTG +
Preference number: 4 (lower is better)
Translates to: RAVGLSASGGGGACRPRAGWWPP*WLLVPL
Trigger: CAGAGGCACTAGGAGCCAGCAGGGCGGCCACCATCC...GGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGATAAACCCACTGCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443147.5
CDS-3UTR GCA 90 bp GTCCAGCAGCACAGAGGCCACCGTGTTGGCCTTCCTGGAAGGGAGGTCCGGCCCTGGGCTGGAGCTCCCTaGACCCCCACAGCCACACAG +
Preference number: 4 (lower is better)
Translates to: VQQHRGHRVGLPGREVRPWAGAP*TPTATQ
Trigger: CTGTGTGGCTGTGGGGGTGCAGGGAGCTCCAGCCCA...GGGCCGGACCTCCCTTCCAGGAAGGCCAACACGGTGGCCTCTGTGCTGCTGGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470411.2
CDS-3UTR CCA 90 bp CCTCCACAGAGGCCCGAGGGTGGGCCAAAGAGTCAGGTACCACCCCCAGCAGGAGCGCTTGCCGGTGGGTaGCCTCGCAGCTCCAGAACG +
Preference number: 4 (lower is better)
Translates to: PPQRPEGGPKSQVPPPAGALAGG*PRSSRT
Trigger: CGTTCTGGAGCTGCGAGGCCACCCACCGGCAAGCGC...TCCTGCTGGGGGTGGTACCTGACTCTTTGGCCCACCCTCGGGCCTCTGTGGAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR CCA 90 bp TGGCTGTGGCCGTGTGGTGGTGCCAGGCGAGCCAGCAGTTCCCTCAGTCCTGCTGCGCTTGCCGGTGGGTaGCCTCGCAGCTCCAGAACG +
Preference number: 4 (lower is better)
Translates to: WLWPCGGARRASSSLSPAALAGG*PRSSRT
Trigger: CGTTCTGGAGCTGCGAGGCCACCCACCGGCAAGCGC...AGCAGGACTGAGGGAACTGCTGGCTCGCCTGGCACCACCACACGGCCACAGCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443147.5
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp GGACGAATAGGTACGGCTGGGTCAGTGGGCGGGCCCTTGACACTGAGGCTGCTCGTGGTGGCTCCAGCCTaGCGGTCGGGCAGGACGGTG +
Preference number: 4 (lower is better)
Translates to: GRIGTAGSVGGPLTLRLLVVAPA*RSGRTV
Trigger: CACCGTCCTGCCCGACCGCCAGGCTGGAGCCACCAC...GAGCAGCCTCAGTGTCAAGGGCCCGCCCACTGACCCAGCCGTACCTATTCGTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000026218.9
ENST00000321878.10
CDS-3UTR CCA 90 bp GCATGGGGCAGTGCTCTGGACACCTGGGGTTGCTGTGCTCGCCACCATGGTGACGTCCCGAGGCTCGCCTaGCCAGCTCCGCGAGGATGC +
Preference number: 4 (lower is better)
Translates to: AWGSALDTWGCCARHHGDVPRLA*PAPRGC
Trigger: GCATCCTCGCGGAGCTGGCCAGGCGAGCCTCGGGAC...GTCACCATGGTGGCGAGCACAGCAACCCCAGGTGTCCAGAGCACTGCCCCATGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321878.10
ENST00000636657.1
CDS-3UTR CCA 90 bp CAGGCAGTCCTGGTGCTGCTGAGATGGGCGCTGCCTCCTCCCACCCACAGCGCGCCAACAGCAGGCAAATaGGTCCCGAGGCTCGCCTGG +
Preference number: 4 (lower is better)
Translates to: QAVLVLLRWALPPPTHSAPTAGK*VPRLAW
Trigger: CCAGGCGAGCCTCGGGACCCATTTGCCTGCTGTTGG...CGCGCTGTGGGTGGGAGGAGGCAGCGCCCATCTCAGCAGCACCAGGACTGCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000636657.1
CDS-3UTR CCA 90 bp CACCCGCACCCAGACCGTGCCGTCTGGCAGGCACTTTCGGCCTCAGTGCCACGGCCAACAGCAGGCAAATaGGTCCCGAGGCTCGCCTGG +
Preference number: 4 (lower is better)
Translates to: HPHPDRAVWQALSASVPRPTAGK*VPRLAW
Trigger: CCAGGCGAGCCTCGGGACCCATTTGCCTGCTGTTGG...CCGTGGCACTGAGGCCGAAAGTGCCTGCCAGACGGCACGGTCTGGGTGCGGGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000636657.1
CDS-3UTR CCA 90 bp GGCAGTGGGTTTATCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGCCAACAGCAGGCAAATaGGTCCCGAGGCTCGCCTGG +
Preference number: 4 (lower is better)
Translates to: GSGFICIRRRRGLPASCRPTAGK*VPRLAW
Trigger: CCAGGCGAGCCTCGGGACCCATTTGCCTGCTGTTGG...CCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGATAAACCCACTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443147.5
ENST00000636657.1
CDS-3UTR CCA 90 bp CAGGCAGTCCTGGTGCTGCTGAGATGGGCGCTGCCTCCTCCCACCCACAGCGCGCACTGCAGCAGATGCTaGAGCTCCTCGGCCACGTGG +
Preference number: 4 (lower is better)
Translates to: QAVLVLLRWALPPPTHSAHCSRC*SSSATW
Trigger: CCACGTGGCCGAGGAGCTCCAGCATCTGCTGCAGTG...CGCGCTGTGGGTGGGAGGAGGCAGCGCCCATCTCAGCAGCACCAGGACTGCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp GGGCAGTGGGTTTATCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGCACTGCAGCAGATGCTaGAGCTCCTCGGCCACGTGG +
Preference number: 4 (lower is better)
Translates to: GQWVYLHQEAEGPAGLVPHCSRC*SSSATW
Trigger: CCACGTGGCCGAGGAGCTCCAGCATCTGCTGCAGTG...CGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGATAAACCCACTGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000443147.5
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR CCA 90 bp GCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGAGGACACGGAACTTCACACTGCAGCAGATGCTaGAGCTCCTCGGCCACGTGG +
Preference number: 4 (lower is better)
Translates to: ASGGGGACRPRAGGHGTSHCSRC*SSSATW
Trigger: CCACGTGGCCGAGGAGCTCCAGCATCTGCTGCAGTG...TGAAGTTCCGTGTCCTCCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
ENST00000637468.1
CDS-3UTR CCA 90 bp TGGCTGTGGCCGTGTGGTGGTGCCAGGCGAGCCAGCAGTTCCCTCAGTCCTGCTGCTGTGGCCGTGTGGTaGTGCCAGGCGAGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: WLWPCGGARRASSSLSPAAVAVW*CQASQQ
Trigger: CTGCTGGCTCGCCTGGCACCACCACACGGCCACAGC...AGCAGGACTGAGGGAACTGCTGGCTCGCCTGGCACCACCACACGGCCACAGCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443147.5
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR CCA 90 bp AATAGGTACGGCTGGGTCAGTGGGCGGGCCCTTGACACTGAGGCTGCTCCCGCCCTGGCTGTGGCCGTGTaGTGGTGCCAGGCGAGCCAG +
Preference number: 4 (lower is better)
Translates to: NRYGWVSGRALDTEAAPALAVAV*WCQASQ
Trigger: CTGGCTCGCCTGGCACCACCACACGGCCACAGCCAG...GGCGGGAGCAGCCTCAGTGTCAAGGGCCCGCCCACTGACCCAGCCGTACCTATT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp AGAGCAGATGGCTGGCTGTGGCCGTGTGGTGGTGCCAGGCGAGCCAGCAGTTCCCTGGCTGTGGCCGTGTaGTGGTGCCAGGCGAGCCAG +
Preference number: 4 (lower is better)
Translates to: RADGWLWPCGGARRASSSLAVAV*WCQASQ
Trigger: CTGGCTCGCCTGGCACCACCACACGGCCACAGCCAG...GGAACTGCTGGCTCGCCTGGCACCACCACACGGCCACAGCCAGCCATCTGCTCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000321878.10
ENST00000443147.5
ENST00000540241.1
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR CCA 90 bp CTGGAGCTCCTCGGCCACGTGGTCAGCCACAGGAACGAGGGCGTCGGCCAGATGCCCTGGCAGAGCAGATaGCTGGCTGTGGCCGTGTGG +
Preference number: 4 (lower is better)
Translates to: LELLGHVVSHRNEGVGQMPWQSR*LAVAVW
Trigger: CCACACGGCCACAGCCAGCCATCTGCTCTGCCAGGG...CATCTGGCCGACGCCCTCGTTCCTGTGGCTGACCACGTGGCCGAGGAGCTCCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp TCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGAGGACACGGAACTGAGCTGGTGCCACCCTaGCAGAGCAGATGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: SASGGGGACRPRAGGHGTELVPP*QSRWLA
Trigger: AGCCAGCCATCTGCTCTGCCAGGGTGGCACCAGCTC...AGTTCCGTGTCCTCCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR CCA 90 bp CAGGGAACACCCGCACCCAGACCGTGCCGTCTGGCAGGCACTTTCGGCCTCAGTTGCGGCCAGCCTGGCTaGCCACCCCCACATCTGCTC +
Preference number: 4 (lower is better)
Translates to: QGTPAPRPCRLAGTFGLSCGQPG*PPPHLL
Trigger: GAGCAGATGTGGGGGTGGCCAGCCAGGCTGGCCGCA...ACTGAGGCCGAAAGTGCCTGCCAGACGGCACGGTCTGGGTGCGGGTGTTCCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp TGGGGCAGTGCTCTGGACACCTGGGGTTGCTGTGCTCGCCACCATGGTGACCGCTGCGGCCAGCCTGGCTaGCCACCCCCACATCTGCTC +
Preference number: 4 (lower is better)
Translates to: WGSALDTWGCCARHHGDRCGQPG*PPPHLL
Trigger: GAGCAGATGTGGGGGTGGCCAGCCAGGCTGGCCGCA...GCGGTCACCATGGTGGCGAGCACAGCAACCCCAGGTGTCCAGAGCACTGCCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000321878.10
ENST00000635205.1
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp GGCAGTCCTGGTGCTGCTGAGATGGGCGCTGCCTCCTCCCACCCACAGCGCGTCCCTGGGTACACAGGGTaGGCATGGGGCAGTGCTCTG +
Preference number: 4 (lower is better)
Translates to: GSPGAAEMGAASSHPQRVPGYTG*AWGSAL
Trigger: CAGAGCACTGCCCCATGCCCACCCTGTGTACCCAGG...GACGCGCTGTGGGTGGGAGGAGGCAGCGCCCATCTCAGCAGCACCAGGACTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp CTGGAGCTCCTCGGCCACGTGGTCAGCCACAGGAACGAGGGCGTCGGCCAGATGCTGGGGCTGCTGTGGTaGACGGACCCTCTGGACCTG +
Preference number: 4 (lower is better)
Translates to: LELLGHVVSHRNEGVGQMLGLLW*TDPLDL
Trigger: CAGGTCCAGAGGGTCCGTCCACCACAGCAGCCCCAG...CATCTGGCCGACGCCCTCGTTCCTGTGGCTGACCACGTGGCCGAGGAGCTCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp TGGGTTTATCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGAGGACCTGGGGCTGCTGTGGTaGACGGACCCTCTGGACCTG +
Preference number: 4 (lower is better)
Translates to: WVYLHQEAEGPAGLVPEDLGLLW*TDPLDL
Trigger: CAGGTCCAGAGGGTCCGTCCACCACAGCAGCCCCAG...GTCCTCCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGATAAACCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000635205.1
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp GAAGCGGGTCCCAAGGCAGGCAGTGCCAGTGATGGAGTGCGGCCAGCCTGGCTGCACCTGGGGCTGCTGTaGTGGACGGACCCTCTGGAC +
Preference number: 4 (lower is better)
Translates to: EAGPKAGSASDGVRPAWLHLGLL*WTDPLD
Trigger: GTCCAGAGGGTCCGTCCACCACAGCAGCCCCAGGTG...CAGCCAGGCTGGCCGCACTCCATCACTGGCACTGCCTGCCTTGGGACCCGCTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321878.10
ENST00000635205.1
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp GGACTCGGGCTCACAGGGAACACCCGCACCCAGACCGTGCCGTCTGGCAGGCACGAGGGTGCCTGGGACTaGGGGGTTCATCCTGGCAAG +
Preference number: 4 (lower is better)
Translates to: GLGLTGNTRTQTVPSGRHEGAWD*GVHPGK
Trigger: CTTGCCAGGATGAACCCCCCAGTCCCAGGCACCCTC...GTGCCTGCCAGACGGCACGGTCTGGGTGCGGGTGTTCCCTGTGAGCCCGAGTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp GGCTCCCCTCCTGAAGCGGACTCGGGCTCACAGGGAACACCCGCACCCAGACCGGAGGGTGCCTGGGACTaGGGGGTTCATCCTGGCAAG +
Preference number: 4 (lower is better)
Translates to: GSPPEADSGSQGTPAPRPEGAWD*GVHPGK
Trigger: CTTGCCAGGATGAACCCCCCAGTCCCAGGCACCCTC...CGGTCTGGGTGCGGGTGTTCCCTGTGAGCCCGAGTCCGCTTCAGGAGGGGAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp GTGGCCGTGTGGTGGTGCCAGGCGAGCCAGCAGTTCCCTCAGTCCTGCTTGTCCCGGCTTCCCCGGTGCTaGGTTGCCAGGGAGTCCCAG +
Preference number: 4 (lower is better)
Translates to: VAVWWCQASQQFPQSCLSRLPRC*VARESQ
Trigger: CTGGGACTCCCTGGCAACCCAGCACCGGGGAAGCCG...GGACAAGCAGGACTGAGGGAACTGCTGGCTCGCCTGGCACCACCACACGGCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp TGGCTGTGGCCGTGTGGTGGTGCCAGGCGAGCCAGCAGTTCCCTCAGTCCTGCTCGGCTTCCCCGGTGCTaGGTTGCCAGGGAGTCCCAG +
Preference number: 4 (lower is better)
Translates to: WLWPCGGARRASSSLSPARLPRC*VARESQ
Trigger: CTGGGACTCCCTGGCAACCCAGCACCGGGGAAGCCG...AGCAGGACTGAGGGAACTGCTGGCTCGCCTGGCACCACCACACGGCCACAGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp CACCAGTGTCCTCAGGCCCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCGACACAGGGCAGAATaGGCCCCATCCACAGGACCA +
Preference number: 4 (lower is better)
Translates to: HQCPQALHQEAEGPAGLVRHRAE*APSTGP
Trigger: TGGTCCTGTGGATGGGGCCCATTCTGCCCTGTGTCG...CACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGGGCCTGAGGACACTGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420990.6
CDS-3UTR CCA 90 bp CCCCAGTCCACTCACGTCAGCCACAGGAACGAGGGCGTCGGCCAGATGCCCGATGAGCCTCAGCCCGGCTaGCTCCTGCACACAGCCCCT +
Preference number: 4 (lower is better)
Translates to: PQSTHVSHRNEGVGQMPDEPQPG*LLHTAP
Trigger: AGGGGCTGTGTGCAGGAGCCAGCCGGGCTGAGGCTC...ATCGGGCATCTGGCCGACGCCCTCGTTCCTGTGGCTGACGTGAGTGGACTGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470411.2
CDS-3UTR CCA 90 bp GTTGGCCTTCCTGGAAGGGAGGTCCGGCCCGGCCGGCATGAGGGTGGCCAGCACACAGAGGCCCGAGGGTaGGCCAAAGAGTCAGGTACC +
Preference number: 4 (lower is better)
Translates to: VGLPGREVRPGRHEGGQHTEARG*AKESGT
Trigger: GGTACCTGACTCTTTGGCCCACCCTCGGGCCTCTGT...GTGCTGGCCACCCTCATGCCGGCCGGGCCGGACCTCCCTTCCAGGAAGGCCAAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470411.2
CDS-3UTR CCA 90 bp CCTGGCCACAAGCAGGCCCAGTGCACACCTGCAGCCCACACAAGACCCACCCAGCCCAGAGGCCTGGCCTaGCCACAAGCAGGCCCAGTG +
Preference number: 4 (lower is better)
Translates to: PGHKQAQCTPAAHTRPTQPRGLA*PQAGPV
Trigger: CACTGGGCCTGCTTGTGGCCAGGCCAGGCCTCTGGG...CTGGGTGGGTCTTGTGTGGGCTGCAGGTGTGCACTGGGCCTGCTTGTGGCCAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR CCA 90 bp GTTGGCCTTCCTGGAAGGGAGGTCCGGCCCGGCCGGCATGAGGGTGGCCAGCACGACAAAGTAGGCCGGTaGCAGGTGCGGACGACCACA +
Preference number: 4 (lower is better)
Translates to: VGLPGREVRPGRHEGGQHDKVGR*QVRTTT
Trigger: TGTGGTCGTCCGCACCTGCCACCGGCCTACTTTGTC...GTGCTGGCCACCCTCATGCCGGCCGGGCCGGACCTCCCTTCCAGGAAGGCCAAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470411.2
CDS-3UTR CCA 90 bp CTGCAGAGGAGGGGGCTGCACCCGGCTGGAAACGGGGCACAGACCATGCAGGGACCGGAGGGGTCAGCGTaGTGCAGAGGGGGATGGAGA +
Preference number: 4 (lower is better)
Translates to: LQRRGLHPAGNGAQTMQGPEGSA*CRGGWR
Trigger: TCTCCATCCCCCTCTGCACCACGCTGACCCCTCCGG...TCCCTGCATGGTCTGTGCCCCGTTTCCAGCCGGGTGCAGCCCCCTCCTCTGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000470411.2
CDS-3UTR TCA 90 bp GCAGTGCTCTGGACACCTGGGGTTGCTGTGCTCGCCACCATGGTGACCGCAGCAGCCAGGACAGCAGCATaGGGCCCAGGGCCACGTCCA +
Preference number: 4 (lower is better)
Translates to: AVLWTPGVAVLATMVTAAARTAA*GPGPRP
Trigger: TGGACGTGGCCCTGGGCCTCATGCTGCTGTCCTGGC...TGCTGCGGTCACCATGGTGGCGAGCACAGCAACCCCAGGTGTCCAGAGCACTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR TCA 90 bp CCCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGAGGACACGGAACGAACAGACGCCACAGTaGGGACAGGCCATGGATCTT +
Preference number: 4 (lower is better)
Translates to: PCIRRRRGLPASCRRTRNEQTPQ*GQAMDL
Trigger: AAGATCCATGGCCTGTCCTCACTGTGGCGTCTGTTC...GTTCCGTGTCCTCCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420990.6
CDS-3UTR TCA 90 bp TCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGAGGACACGGAACTGAGCCGAAGACCCAGTaGGTACAGCGGCAGGGAGTT +
Preference number: 4 (lower is better)
Translates to: SASGGGGACRPRAGGHGTEPKTQ*VQRQGV
Trigger: AACTCCCTGCCGCTGTACTCACTGGGTCTTCGGCTC...AGTTCCGTGTCCTCCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443147.5
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
ENST00000637468.1
CDS-3UTR TCA 90 bp CAGGCAGTCCTGGTGCTGCTGAGATGGGCGCTGCCTCCTCCCACCCACAGCGCGGCCTCCAGGGGTAGATaGGCTCCCCAAGGAACAGCT +
Preference number: 4 (lower is better)
Translates to: QAVLVLLRWALPPPTHSAASRGR*APQGTA
Trigger: AGCTGTTCCTTGGGGAGCTCATCTACCCCTGGAGGC...CGCGCTGTGGGTGGGAGGAGGCAGCGCCCATCTCAGCAGCACCAGGACTGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR TCA 90 bp GCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGAGGACACGGAACTTCAGCCTCCAGGGGTAGATaGGCTCCCCAAGGAACAGCT +
Preference number: 4 (lower is better)
Translates to: ASGGGGACRPRAGGHGTSASRGR*APQGTA
Trigger: AGCTGTTCCTTGGGGAGCTCATCTACCCCTGGAGGC...TGAAGTTCCGTGTCCTCCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR TCA 90 bp GGGGCACCGTGGACGAATAGGTACGGCTGGGTCAGTGGGCGGGCCCTTGACACTAGGACATGCGCCAGCTaGGCTGGTGCCACCCTGGCA +
Preference number: 4 (lower is better)
Translates to: GAPWTNRYGWVSGRALDTRTCAS*AGATLA
Trigger: TGCCAGGGTGGCACCAGCTCAGCTGGCGCATGTCCT...AGTGTCAAGGGCCCGCCCACTGACCCAGCCGTACCTATTCGTCCACGGTGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR TCA 90 bp AATAGGTACGGCTGGGTCAGTGGGCGGGCCCTTGACACTGAGGCTGCTCCCGCCTGCTCGCCACCATGGTaGCCGCAGCAGGTGGGAAGC +
Preference number: 4 (lower is better)
Translates to: NRYGWVSGRALDTEAAPACSPPW*PQQVGS
Trigger: GCTTCCCACCTGCTGCGGTCACCATGGTGGCGAGCA...GGCGGGAGCAGCCTCAGTGTCAAGGGCCCGCCCACTGACCCAGCCGTACCTATT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR TCA 90 bp GAACACCCGCACCCAGACCGTGCCGTCTGGCAGGCACTTTCGGCCTCAGTGCCATGCAGGCTCCCCTCCTaGAGCGGACTCGGGCTCACA +
Preference number: 4 (lower is better)
Translates to: EHPHPDRAVWQALSASVPCRLPS*SGLGLT
Trigger: TGTGAGCCCGAGTCCGCTTCAGGAGGGGAGCCTGCA...TGGCACTGAGGCCGAAAGTGCCTGCCAGACGGCACGGTCTGGGTGCGGGTGTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR TCA 90 bp GGCAGTGCTCTGGACACCTGGGGTTGCTGTGCTCGCCACCATGGTGACCGCAGCTGCAGGCTCCCCTCCTaGAGCGGACTCGGGCTCACA +
Preference number: 4 (lower is better)
Translates to: GSALDTWGCCARHHGDRSCRLPS*SGLGLT
Trigger: TGTGAGCCCGAGTCCGCTTCAGGAGGGGAGCCTGCA...GCTGCGGTCACCATGGTGGCGAGCACAGCAACCCCAGGTGTCCAGAGCACTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR TCA 90 bp GGCCTGGCCACAAGCAGGCCCAGTGCACACCTGCAGCCCACACAAGACCCACCCCCAGGAGGGCAACGCTaGTCTCAGGGACCACAAGGG +
Preference number: 4 (lower is better)
Translates to: GLATSRPSAHLQPTQDPPPGGQR*SQGPQG
Trigger: CCCTTGTGGTCCCTGAGATCAGCGTTGCCCTCCTGG...GGGTGGGTCTTGTGTGGGCTGCAGGTGTGCACTGGGCCTGCTTGTGGCCAGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR TCA 90 bp CTCACAGGGAACACCCGCACCCAGACCGTGCCGTCTGGCAGGCACTTTCGGCCTACAGGGGCCAGAGCTTaGACACTCAGGGGCACCGGG +
Preference number: 4 (lower is better)
Translates to: LTGNTRTQTVPSGRHFRPTGARA*TLRGTG
Trigger: CCCGGTGCCCCTGAGTGTTCAAGCTCTGGCCCCTGT...AGGCCGAAAGTGCCTGCCAGACGGCACGGTCTGGGTGCGGGTGTTCCCTGTGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635909.1
CDS-3UTR GCA 90 bp GTGCACCACGCGGCTGTAGGGCAGTGGGTTTATCTGCATCAGGAGGCGGAGGGGCTCTCCTCGGGCTCCTaGCGGCAGTGGCACCAGGTG +
Preference number: 4 (lower is better)
Translates to: VHHAAVGQWVYLHQEAEGLSSGS*RQWHQV
Trigger: CACCTGGTGCCACTGCCGGCAGGAGCCCGAGGAGAG...CCCCTCCGCCTCCTGATGCAGATAAACCCACTGCCCTACAGCCGCGTGGTGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443147.5
ENST00000636657.1
CDS-3UTR GCA 90 bp GAACACCCGCACCCAGACCGTGCCGTCTGGCAGGCACTTTCGGCCTCAGTGCCACGCAGCTCCAGAACGTaGCGCCTCTCTCCCGGCACA +
Preference number: 4 (lower is better)
Translates to: EHPHPDRAVWQALSASVPRSSRT*RLSPGT
Trigger: TGTGCCGGGAGAGAGGCGGCACGTTCTGGAGCTGCG...TGGCACTGAGGCCGAAAGTGCCTGCCAGACGGCACGGTCTGGGTGCGGGTGTTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp CCTGCAGGCTCCCCTCCTGAAGCGGACTCGGGCTCACAGGGAACACCCGCACCCGAGCACCTCACTGCGTaGTACCGTGTCGAAGACGGC +
Preference number: 4 (lower is better)
Translates to: PAGSPPEADSGSQGTPAPEHLTA*YRVEDG
Trigger: GCCGTCTTCGACACGGTAGCACGCAGTGAGGTGCTC...GGGTGCGGGTGTTCCCTGTGAGCCCGAGTCCGCTTCAGGAGGGGAGCCTGCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000636657.1
CDS-3UTR GCA 90 bp ATGGAGTGCGGCCAGCCTGGCTGGCCACCCCCACATCTGCTCACTCCCAATGACTCCACGCCCTCCGACTaGCAGTGGCTCAGCCGCACG +
Preference number: 4 (lower is better)
Translates to: MECGQPGWPPPHLLTPNDSTPSD*QWLSRT
Trigger: CGTGCGGCTGAGCCACTGGCAGTCGGAGGGCGTGGA...GTCATTGGGAGTGAGCAGATGTGGGGGTGGCCAGCCAGGCTGGCCGCACTCCAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321878.10
ENST00000636657.1
CDS-3UTR GCA 90 bp CACCAGGAGCCGGAGCAGGGTGAACACCAGGTAGTACAGGGCTGTGGTAGGCAGCCAGCTCCGCGAGGATaGTGGCCTCCACGCCCTCCG +
Preference number: 4 (lower is better)
Translates to: HQEPEQGEHQVVQGCGRQPAPRG*WPPRPP
Trigger: CGGAGGGCGTGGAGGCCAGCATCCTCGCGGAGCTGG...CTGCCTACCACAGCCCTGTACTACCTGGTGTTCACCCTGCTCCGGCTCCTGGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636657.1
CDS-3UTR GCA 90 bp ATCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGAGGACACGGAACCGCACGTGGAGAGTTTaGTCCCGAGGAAGGACAGGG +
Preference number: 4 (lower is better)
Translates to: ICIRRRRGLPASCRRTRNRTWRV*SRGRTG
Trigger: CCCTGTCCTTCCTCGGGAGCAAACTCTCCACGTGCG...GTTCCGTGTCCTCCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443147.5
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
ENST00000637468.1
CDS-3UTR GCA 90 bp CCCCAGTCCACTCACGTCAGCCACAGGAACGAGGGCGTCGGCCAGATGCCCGATAGGTGCTCCAGCCGGTaGCGGAGCTGTTCGCACGTG +
Preference number: 4 (lower is better)
Translates to: PQSTHVSHRNEGVGQMPDRCSSR*RSCSHV
Trigger: CACGTGCGAACAGCTCCGGCACCGGCTGGAGCACCT...ATCGGGCATCTGGCCGACGCCCTCGTTCCTGTGGCTGACGTGAGTGGACTGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470411.2
CDS-3UTR GCA 90 bp AGCAGATGGCTGGCTGTGGCCGTGTGGTGGTGCCAGGCGAGCCAGCAGTTCCCTAGGTGCTCCAGCCGGTaGCGGAGCTGTTCGCACGTG +
Preference number: 4 (lower is better)
Translates to: SRWLAVAVWWCQASQQFPRCSSR*RSCSHV
Trigger: CACGTGCGAACAGCTCCGGCACCGGCTGGAGCACCT...AGGGAACTGCTGGCTCGCCTGGCACCACCACACGGCCACAGCCAGCCATCTGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000443147.5
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR GCA 90 bp CCTGGTGCTGCTGAGATGGGCGCTGCCTCCTCCCACCCACAGCGCGTCATCCCCAAGATTAGCGTGAGGTaGTCCAGCCGGTGCCGGAGC +
Preference number: 4 (lower is better)
Translates to: PGAAEMGAASSHPQRVIPKISVR*SSRCRS
Trigger: GCTCCGGCACCGGCTGGAGCACCTCACGCTAATCTT...GGGGATGACGCGCTGTGGGTGGGAGGAGGCAGCGCCCATCTCAGCAGCACCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp GGACGAATAGGTACGGCTGGGTCAGTGGGCGGGCCCTTGACACTGAGGCTGCTCAGGGCGTCGGCCAGATaGCCGATGCGGCTTCTCCCG +
Preference number: 4 (lower is better)
Translates to: GRIGTAGSVGGPLTLRLLRASAR*PMRLLP
Trigger: CGGGAGAAGCCGCATCGGGCATCTGGCCGACGCCCT...GAGCAGCCTCAGTGTCAAGGGCCCGCCCACTGACCCAGCCGTACCTATTCGTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp CTGGCCACAAGCAGGCCCAGTGCACACCTGCAGCCCACACAAGACCCACCCAGTAGGGCGTCGGCCAGATaGCCGATGCGGCTTCTCCCG +
Preference number: 4 (lower is better)
Translates to: LATSRPSAHLQPTQDPPSRASAR*PMRLLP
Trigger: CGGGAGAAGCCGCATCGGGCATCTGGCCGACGCCCT...ACTGGGTGGGTCTTGTGTGGGCTGCAGGTGTGCACTGGGCCTGCTTGTGGCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR GCA 90 bp GAAGCGGGTCCCAAGGCAGGCAGTGCCAGTGATGGAGTGCGGCCAGCCTGGCTGAGCCACTGCAGCAGATaGTGGAGCTCCTCGGCCACG +
Preference number: 4 (lower is better)
Translates to: EAGPKAGSASDGVRPAWLSHCSR*WSSSAT
Trigger: CGTGGCCGAGGAGCTCCAGCATCTGCTGCAGTGGCT...CAGCCAGGCTGGCCGCACTCCATCACTGGCACTGCCTGCCTTGGGACCCGCTTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321878.10
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR GCA 90 bp CCTGGTGCTGCTGAGATGGGCGCTGCCTCCTCCCACCCACAGCGCGTCATCCCCGCACCCATCAGCCACTaGAGCAGATGCTGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: PGAAEMGAASSHPQRVIPAPISH*SRCWSS
Trigger: GGAGCTCCAGCATCTGCTGCAGTGGCTGATGGGTGC...GGGGATGACGCGCTGTGGGTGGGAGGAGGCAGCGCCCATCTCAGCAGCACCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp CTCGTGCCGGAGGACACGGAACTTCACGCCAGCCGCCAGCCTGTAGGGCCGGCAGCACCCATCAGCCACTaGAGCAGATGCTGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: LVPEDTELHASRQPVGPAAPISH*SRCWSS
Trigger: GGAGCTCCAGCATCTGCTGCAGTGGCTGATGGGTGC...TGCCGGCCCTACAGGCTGGCGGCTGGCGTGAAGTTCCGTGTCCTCCGGCACGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
ENST00000637468.1
CDS-3UTR GCA 90 bp CGCACCCAGACCGTGCCGTCTGGCAGGCACTTTCGGCCTCAGTGCCACGGCCCCCAGCACCTGGTCCAGTaGACGGTTCATCTTGAGCCC +
Preference number: 4 (lower is better)
Translates to: RTQTVPSGRHFRPQCHGPQHLVQ*TVHLEP
Trigger: GGGCTCAAGATGAACCGTGCACTGGACCAGGTGCTG...GGGGCCGTGGCACTGAGGCCGAAAGTGCCTGCCAGACGGCACGGTCTGGGTGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp GCACCTGCAGGCTCCCCTCCTGAAGCGGACTCGGGCTCACAGGGAACACCCGCAGCCGAGAGGCCCACGTaGCAAAGGATGTGCTCCACG +
Preference number: 4 (lower is better)
Translates to: APAGSPPEADSGSQGTPAAERPT*QRMCST
Trigger: CGTGGAGCACATCCTTTGGCACGTGGGCCTCTCGGC...TGCGGGTGTTCCCTGTGAGCCCGAGTCCGCTTCAGGAGGGGAGCCTGCAGGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp CCTCCTGAAGCGGACTCGGGCTCACAGGGAACACCCGCACCCAGACCGTGCCGTAGATGGATCAGGCCCTaGACGGCGACCACCAGGAGC +
Preference number: 4 (lower is better)
Translates to: PPEADSGSQGTPAPRPCRRWIRP*TATTRS
Trigger: GCTCCTGGTGGTCGCCGTGCAGGGCCTGATCCATCT...ACGGCACGGTCTGGGTGCGGGTGTTCCCTGTGAGCCCGAGTCCGCTTCAGGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp GGGTTTATCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGAGGACAAGATGGATCAGGCCCTaGACGGCGACCACCAGGAGC +
Preference number: 4 (lower is better)
Translates to: GFICIRRRRGLPASCRRTRWIRP*TATTRS
Trigger: GCTCCTGGTGGTCGCCGTGCAGGGCCTGATCCATCT...TGTCCTCCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGATAAACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443147.5
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
ENST00000637468.1
CDS-3UTR GCA 90 bp GAGCAGATGGCTGGCTGTGGCCGTGTGGTGGTGCCAGGCGAGCCAGCAGTTCCCAGATGGATCAGGCCCTaGACGGCGACCACCAGGAGC +
Preference number: 4 (lower is better)
Translates to: EQMAGCGRVVVPGEPAVPRWIRP*TATTRS
Trigger: GCTCCTGGTGGTCGCCGTGCAGGGCCTGATCCATCT...GGGAACTGCTGGCTCGCCTGGCACCACCACACGGCCACAGCCAGCCATCTGCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000321878.10
ENST00000443147.5
ENST00000540241.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR GCA 90 bp TGGTGCCAGGCGAGCCAGCAGTTCCCTCAGTCCTGCTTGTCCCCTCTCTGCCTCAGGGCGCCCCAGGAGTaGTTGGGGTGGCAGCCACAG +
Preference number: 4 (lower is better)
Translates to: WCQASQQFPQSCLSPLCLRAPQE*LGWQPQ
Trigger: CTGTGGCTGCCACCCCAAGCACTCCTGGGGCGCCCT...GAGGCAGAGAGGGGACAAGCAGGACTGAGGGAACTGCTGGCTCGCCTGGCACCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000443147.5
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR GCA 90 bp GCATGGGGCAGTGCTCTGGACACCTGGGGTTGCTGTGCTCGCCACCATGGTGACCCCCAAGGAACAGCTTaGGGCACAGGGCGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: AWGSALDTWGCCARHHGDPQGTA*GTGRPR
Trigger: CCTGGGGCGCCCTGTGCCGCAAGCTGTTCCTTGGGG...GTCACCATGGTGGCGAGCACAGCAACCCCAGGTGTCCAGAGCACTGCCCCATGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000321878.10
ENST00000635205.1
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp GACCGTGCCGTCTGGCAGGCACTTTCGGCCTCAGTGCCACGGCCCCCTCCCCAGCAGTTCCCTCAGTCCTaGTTGTCCCCTCTCTGCCTC +
Preference number: 4 (lower is better)
Translates to: DRAVWQALSASVPRPPPQQFPQS*LSPLCL
Trigger: GAGGCAGAGAGGGGACAAGCAGGACTGAGGGAACTG...CTGGGGAGGGGGCCGTGGCACTGAGGCCGAAAGTGCCTGCCAGACGGCACGGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp GTGCCGTCTGGCAGGCACTTTCGGCCTCAGTGCCACGGCCCCCTCCCCAGGCCACAGTTCCCTCAGTCCTaGTTGTCCCCTCTCTGCCTC +
Preference number: 4 (lower is better)
Translates to: VPSGRHFRPQCHGPLPRPQFPQS*LSPLCL
Trigger: GAGGCAGAGAGGGGACAAGCAGGACTGAGGGAACTG...TGGCCTGGGGAGGGGGCCGTGGCACTGAGGCCGAAAGTGCCTGCCAGACGGCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp AATAGGTACGGCTGGGTCAGTGGGCGGGCCCTTGACACTGAGGCTGCTCCCGCCGTGGCCGTGTGGTGGTaGCAGGCGAGCCAGCAGTTC +
Preference number: 4 (lower is better)
Translates to: NRYGWVSGRALDTEAAPAVAVWW*QASQQF
Trigger: GAACTGCTGGCTCGCCTGGCACCACCACACGGCCAC...GGCGGGAGCAGCCTCAGTGTCAAGGGCCCGCCCACTGACCCAGCCGTACCTATT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp CCGTGTGGTGGTGCCAGGCGAGCCAGCAGTTCCCTCAGTCCTGCTTGTCCCCTCGTGGCCGTGTGGTGGTaGCAGGCGAGCCAGCAGTTC +
Preference number: 4 (lower is better)
Translates to: PCGGARRASSSLSPACPLVAVWW*QASQQF
Trigger: GAACTGCTGGCTCGCCTGGCACCACCACACGGCCAC...GAGGGGACAAGCAGGACTGAGGGAACTGCTGGCTCGCCTGGCACCACCACACGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443147.5
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR GCA 90 bp GCTGTAGGGCAGTGGGTTTATCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGGCCGTGTGGTGGTaGCAGGCGAGCCAGCAGTTC +
Preference number: 4 (lower is better)
Translates to: AVGQWVYLHQEAEGPAGLVAVWW*QASQQF
Trigger: GAACTGCTGGCTCGCCTGGCACCACCACACGGCCAC...GAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGATAAACCCACTGCCCTACAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443147.5
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR GCA 90 bp TGGGTTTATCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGAGGACCGCCAGCTGAGCTGGTaGCACCCTGGCAGAGCAGAT +
Preference number: 4 (lower is better)
Translates to: WVYLHQEAEGPAGLVPEDRQLSW*HPGRAD
Trigger: ATCTGCTCTGCCAGGGTGGCACCAGCTCAGCTGGCG...GTCCTCCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGATAAACCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR GCA 90 bp GGCTGGCTGTGGCCGTGTGGTGGTGCCAGGCGAGCCAGCAGTTCCCTCAGTCCTCGCCAGCTGAGCTGGTaGCACCCTGGCAGAGCAGAT +
Preference number: 4 (lower is better)
Translates to: GWLWPCGGARRASSSLSPRQLSW*HPGRAD
Trigger: ATCTGCTCTGCCAGGGTGGCACCAGCTCAGCTGGCG...AGGACTGAGGGAACTGCTGGCTCGCCTGGCACCACCACACGGCCACAGCCAGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR GCA 90 bp CCTGCAGGCTCCCCTCCTGAAGCGGACTCGGGCTCACAGGGAACACCCGCACCCGGCCACCCCCACATCTaGTCACTCCCAATGACCTCC +
Preference number: 4 (lower is better)
Translates to: PAGSPPEADSGSQGTPAPGHPHI*SLPMTS
Trigger: GGAGGTCATTGGGAGTGAGCAGATGTGGGGGTGGCC...GGGTGCGGGTGTTCCCTGTGAGCCCGAGTCCGCTTCAGGAGGGGAGCCTGCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp CACAGGGAACACCCGCACCCAGACCGTGCCGTCTGGCAGGCACTTTCGGCCTCAGTGCCAGTGATGGAGTaGGGCCAGCCTGGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: HREHPHPDRAVWQALSASVPVME*GQPGWP
Trigger: TGGCCAGCCAGGCTGGCCGCACTCCATCACTGGCAC...TGAGGCCGAAAGTGCCTGCCAGACGGCACGGTCTGGGTGCGGGTGTTCCCTGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp GGTGCTGCTGAGATGGGCGCTGCCTCCTCCCACCCACAGCGCGTCATCCCCTCACCCCCAGATGCAGGGTaGTGTTCGGCTGAGGGAGCT +
Preference number: 4 (lower is better)
Translates to: GAAEMGAASSHPQRVIPSPPDAG*CSAEGA
Trigger: AGCTCCCTCAGCCGAACAGCACCCTGCATCTGGGGG...TGAGGGGATGACGCGCTGTGGGTGGGAGGAGGCAGCGCCCATCTCAGCAGCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp GGACCTGCTGCTACGGGGCACCGTGGACGAATAGGTACGGCTGGGTCAGTGGGCTTTGGCCGCAGGACCTaGTGCTACGGGGCACCGTGG +
Preference number: 4 (lower is better)
Translates to: GPAATGHRGRIGTAGSVGFGRRT*CYGAPW
Trigger: CCACGGTGCCCCGTAGCAGCAGGTCCTGCGGCCAAA...GCCCACTGACCCAGCCGTACCTATTCGTCCACGGTGCCCCGTAGCAGCAGGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp CACCCGCACCCAGACCGTGCCGTCTGGCAGGCACTTTCGGCCTCAGTGCCACGGGGCCACAGAGGTGTCTaGACAGCAGGGCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: HPHPDRAVWQALSASVPRGHRGV*TAGLPP
Trigger: AGGAGGAAGCCCTGCTGTGCAGACACCTCTGTGGCC...CCGTGGCACTGAGGCCGAAAGTGCCTGCCAGACGGCACGGTCTGGGTGCGGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp CCTGCAGGCTCCCCTCCTGAAGCGGACTCGGGCTCACAGGGAACACCCGCACCCGGCCACAGAGGTGTCTaGACAGCAGGGCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: PAGSPPEADSGSQGTPAPGHRGV*TAGLPP
Trigger: AGGAGGAAGCCCTGCTGTGCAGACACCTCTGTGGCC...GGGTGCGGGTGTTCCCTGTGAGCCCGAGTCCGCTTCAGGAGGGGAGCCTGCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp GCTGGGGAGGCGGTAGGTGTGCACCACGCGGCTGTAGGGCAGTGGGTTTATCTGGGCCTGCCGGCCTCGTaGCGGAGGACACGGAACTTC +
Preference number: 4 (lower is better)
Translates to: AGEAVGVHHAAVGQWVYLGLPAS*RRTRNF
Trigger: GAAGTTCCGTGTCCTCCGGCACGAGGCCGGCAGGCC...CAGATAAACCCACTGCCCTACAGCCGCGTGGTGCACACCTACCGCCTCCCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443147.5
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR GCA 90 bp GGCCGGCAGAGCCGAAGACCCAGTGAGTACAGCGGCAGGGAGTTGATGAGGTCCGGCCTGCCGGCCTCGTaGCGGAGGACACGGAACTTC +
Preference number: 4 (lower is better)
Translates to: GRQSRRPSEYSGRELMRSGLPAS*RRTRNF
Trigger: GAAGTTCCGTGTCCTCCGGCACGAGGCCGGCAGGCC...GGACCTCATCAACTCCCTGCCGCTGTACTCACTGGGTCTTCGGCTCTGCCGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
ENST00000637468.1
CDS-3UTR GCA 90 bp GGTCTAGGACAAAGTAGGCCGGTGGCAGGTGCGGACGACCACAGGCAAAGCTGCCCGGGAAGGCTCTGCTaGCCAGGAGGGGTCCCCACG +
Preference number: 4 (lower is better)
Translates to: GLGQSRPVAGADDHRQSCPGRLC*PGGVPT
Trigger: CGTGGGGACCCCTCCTGGGCAGCAGAGCCTTCCCGG...GCAGCTTTGCCTGTGGTCGTCCGCACCTGCCACCGGCCTACTTTGTCCTAGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR GCA 90 bp GGCCTGGCCACAAGCAGGCCCAGTGCACACCTGCAGCCCACACAAGACCCACCCGGCCCAGTGCACACCTaGAGCCCACACAAGACCCAC +
Preference number: 4 (lower is better)
Translates to: GLATSRPSAHLQPTQDPPGPVHT*SPHKTH
Trigger: GTGGGTCTTGTGTGGGCTGCAGGTGTGCACTGGGCC...GGGTGGGTCTTGTGTGGGCTGCAGGTGTGCACTGGGCCTGCTTGTGGCCAGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR GCA 90 bp GATGGCTGGCTGTGGCCGTGTGGTGGTGCCAGGCGAGCCAGCAGTTCCCTCAGTTGCCGGGAGGCAGGATaGCTGGAGGTCTCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: DGWLWPCGGARRASSSLSCREAG*LEVSEP
Trigger: GGGCTCTGAGACCTCCAGGCATCCTGCCTCCCGGCA...ACTGAGGGAACTGCTGGCTCGCCTGGCACCACCACACGGCCACAGCCAGCCATC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443147.5
CDS-3UTR CCA 90 bp CCTCCAAGCCCAAGGTGTGATAGCAGGGCCTGCCGTGTTCAGGAGCACACAGCACCACGCCCACCTGGCTaGCCTGCCGCACCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: PPSPRCDSRACRVQEHTAPRPPG*PAAPGP
Trigger: TGGCCCAGGTGCGGCAGGCCAGCCAGGTGGGCGTGG...TGCTGTGTGCTCCTGAACACGGCAGGCCCTGCTATCACACCTTGGGCTTGGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321878.10
ENST00000636657.1
CDS-3UTR CCA 90 bp CCAGAGAGCCAGGAGGGCAACGCTGATCTCAGGGACCACAAGGGAGATACCAGGCCACGCCCACCTGGCTaGCCTGCCGCACCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: PESQEGNADLRDHKGDTRPRPPG*PAAPGP
Trigger: TGGCCCAGGTGCGGCAGGCCAGCCAGGTGGGCGTGG...CCTGGTATCTCCCTTGTGGTCCCTGAGATCAGCGTTGCCCTCCTGGCTCTCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR CCA 90 bp GAACACCCGCACCCAGACCGTGCCGTCTGGCAGGCACTTTCGGCCTCAGTGCCACGCAGCCAGGGCTCATaGGGGAAGACAGCACCCAGG +
Preference number: 4 (lower is better)
Translates to: EHPHPDRAVWQALSASVPRSQGS*GKTAPR
Trigger: CCTGGGTGCTGTCTTCCCCCATGAGCCCTGGCTGCG...TGGCACTGAGGCCGAAAGTGCCTGCCAGACGGCACGGTCTGGGTGCGGGTGTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000636657.1
CDS-3UTR CCA 90 bp GCTGTAGGGCAGTGGGTTTATCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCCGCAGCCAGGGCTCATaGGGGAAGACAGCACCCAGG +
Preference number: 4 (lower is better)
Translates to: AVGQWVYLHQEAEGPAGLRSQGS*GKTAPR
Trigger: CCTGGGTGCTGTCTTCCCCCATGAGCCCTGGCTGCG...GAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGATAAACCCACTGCCCTACAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443147.5
ENST00000636657.1
CDS-3UTR CCA 90 bp GCACCTGCAGGCTCCCCTCCTGAAGCGGACTCGGGCTCACAGGGAACACCCGCAGGTCGGGCAGGACGGTaGGCAGGTGTAGCTGTGACA +
Preference number: 4 (lower is better)
Translates to: APAGSPPEADSGSQGTPAGRAGR*AGVAVT
Trigger: TGTCACAGCTACACCTGCCCACCGTCCTGCCCGACC...TGCGGGTGTTCCCTGTGAGCCCGAGTCCGCTTCAGGAGGGGAGCCTGCAGGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000026218.9
ENST00000321878.10
CDS-3UTR CCA 90 bp CTGCAGAGGAGGGGGCTGCACCCGGCTGGAAACGGGGCACAGACCATGCAGGGAGGTCGGGCAGGACGGTaGGCAGGTGTAGCTGTGACA +
Preference number: 4 (lower is better)
Translates to: LQRRGLHPAGNGAQTMQGGRAGR*AGVAVT
Trigger: TGTCACAGCTACACCTGCCCACCGTCCTGCCCGACC...TCCCTGCATGGTCTGTGCCCCGTTTCCAGCCGGGTGCAGCCCCCTCCTCTGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR CCA 90 bp GTCCAGCAGCACAGAGGCCACCGTGTTGGCCTTCCTGGAAGGGAGGTCCGGCCCGGTCGGGCAGGACGGTaGGCAGGTGTAGCTGTGACA +
Preference number: 4 (lower is better)
Translates to: VQQHRGHRVGLPGREVRPGRAGR*AGVAVT
Trigger: TGTCACAGCTACACCTGCCCACCGTCCTGCCCGACC...GGGCCGGACCTCCCTTCCAGGAAGGCCAACACGGTGGCCTCTGTGCTGCTGGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470411.2
CDS-3UTR CCA 90 bp GGAGCACACAGCAGCGTCCACAAAGCACAGGACATGCGCCAGCTGAGCTGGTGCCCGTGCTGGCAGTGGTaGCTCCAGCCTGGCGGTCGG +
Preference number: 4 (lower is better)
Translates to: GAHSSVHKAQDMRQLSWCPCWQW*LQPGGR
Trigger: CCGACCGCCAGGCTGGAGCCACCACTGCCAGCACGG...GCACCAGCTCAGCTGGCGCATGTCCTGTGCTTTGTGGACGCTGCTGTGTGCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321878.10
CDS-3UTR CCA 90 bp ATGGAGTGCGGCCAGCCTGGCTGGCCACCCCCACATCTGCTCACTCCCAATGACGCTCCGCGAGGATGCTaGCCTCCACGCCCTCCGACT +
Preference number: 4 (lower is better)
Translates to: MECGQPGWPPPHLLTPNDAPRGC*PPRPPT
Trigger: AGTCGGAGGGCGTGGAGGCCAGCATCCTCGCGGAGC...GTCATTGGGAGTGAGCAGATGTGGGGGTGGCCAGCCAGGCTGGCCGCACTCCAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321878.10
ENST00000636657.1
CDS-3UTR CCA 90 bp GTGCACCACGCGGCTGTAGGGCAGTGGGTTTATCTGCATCAGGAGGCGGAGGGGGCTCCGCGAGGATGCTaGCCTCCACGCCCTCCGACT +
Preference number: 4 (lower is better)
Translates to: VHHAAVGQWVYLHQEAEGAPRGC*PPRPPT
Trigger: AGTCGGAGGGCGTGGAGGCCAGCATCCTCGCGGAGC...CCCCTCCGCCTCCTGATGCAGATAAACCCACTGCCCTACAGCCGCGTGGTGCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000443147.5
ENST00000636657.1
CDS-3UTR CCA 90 bp CTCCAGAGCATGGAGAAGGTAGAACTGGCTTTGTGGGGCGGTGGCTCTGGCCCGGTCCCGAGGCTCGCCTaGCCAGCTCCGCGAGGATGC +
Preference number: 4 (lower is better)
Translates to: LQSMEKVELALWGGGSGPVPRLA*PAPRGC
Trigger: GCATCCTCGCGGAGCTGGCCAGGCGAGCCTCGGGAC...CGGGCCAGAGCCACCGCCCCACAAAGCCAGTTCTACCTTCTCCATGCTCTGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470411.2
CDS-3UTR CCA 90 bp CACCCGCACCCAGACCGTGCCGTCTGGCAGGCACTTTCGGCCTCAGTGCCACGGCCAGCGACAGCAGGCTaGCCAACAGCAGGCAAATGG +
Preference number: 4 (lower is better)
Translates to: HPHPDRAVWQALSASVPRPATAG*PTAGKW
Trigger: CCATTTGCCTGCTGTTGGCCAGCCTGCTGTCGCTGG...CCGTGGCACTGAGGCCGAAAGTGCCTGCCAGACGGCACGGTCTGGGTGCGGGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000636657.1
CDS-3UTR CCA 90 bp CCTGCAGGCTCCCCTCCTGAAGCGGACTCGGGCTCACAGGGAACACCCGCACCCCCAGCGACAGCAGGCTaGCCAACAGCAGGCAAATGG +
Preference number: 4 (lower is better)
Translates to: PAGSPPEADSGSQGTPAPPATAG*PTAGKW
Trigger: CCATTTGCCTGCTGTTGGCCAGCCTGCTGTCGCTGG...GGGTGCGGGTGTTCCCTGTGAGCCCGAGTCCGCTTCAGGAGGGGAGCCTGCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000636657.1
CDS-3UTR CCA 90 bp TCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGAGGACACGGAACTGCCTTCCTCATCAGCTaGGCAGGGTTCTCCGCCTTC +
Preference number: 4 (lower is better)
Translates to: SASGGGGACRPRAGGHGTAFLIS*AGFSAF
Trigger: GAAGGCGGAGAACCCTGCCCAGCTGATGAGGAAGGC...AGTTCCGTGTCCTCCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443147.5
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
ENST00000637468.1
CDS-3UTR CCA 90 bp CCTGGTGCTGCTGAGATGGGCGCTGCCTCCTCCCACCCACAGCGCGTCATCCCCCAGAGGCCACCGTGTTaGCCTTCCTCATCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: PGAAEMGAASSHPQRVIPQRPPC*PSSSAG
Trigger: CCCAGCTGATGAGGAAGGCCAACACGGTGGCCTCTG...GGGGATGACGCGCTGTGGGTGGGAGGAGGCAGCGCCCATCTCAGCAGCACCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp CTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGAGGACACGGAACTTCAGAGGCCACCGTGTTaGCCTTCCTCATCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: LHQEAEGPAGLVPEDTELQRPPC*PSSSAG
Trigger: CCCAGCTGATGAGGAAGGCCAACACGGTGGCCTCTG...AAGTTCCGTGTCCTCCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
ENST00000637468.1
CDS-3UTR CCA 90 bp CATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGAGGACACGGAACTTCACATGCGGCTTCTCCCGTaGAGCCAGGACAGCAGCATG +
Preference number: 4 (lower is better)
Translates to: HQEAEGPAGLVPEDTELHMRLLP*SQDSSM
Trigger: CATGCTGCTGTCCTGGCTCCACGGGAGAAGCCGCAT...GTGAAGTTCCGTGTCCTCCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
ENST00000637468.1
CDS-3UTR CCA 90 bp AGGGCAGTGGGTTTATCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCAGCTCCTCGGCCACGTaGTCAGCCACAGGAACGAGG +
Preference number: 4 (lower is better)
Translates to: RAVGLSASGGGGACRPRASSSAT*SATGTR
Trigger: CCTCGTTCCTGTGGCTGACCACGTGGCCGAGGAGCT...GGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGATAAACCCACTGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000443147.5
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR CCA 90 bp CCTCCTGAAGCGGACTCGGGCTCACAGGGAACACCCGCACCCAGACCGTGCCGTAGCTCCTCGGCCACGTaGTCAGCCACAGGAACGAGG +
Preference number: 4 (lower is better)
Translates to: PPEADSGSQGTPAPRPCRSSSAT*SATGTR
Trigger: CCTCGTTCCTGTGGCTGACCACGTGGCCGAGGAGCT...ACGGCACGGTCTGGGTGCGGGTGTTCCCTGTGAGCCCGAGTCCGCTTCAGGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp CGCAGCAGGTGGGAAGCGGGTCCCAAGGCAGGCAGTGCCAGTGATGGAGTGCGGAGCTCCTCGGCCACGTaGTCAGCCACAGGAACGAGG +
Preference number: 4 (lower is better)
Translates to: RSRWEAGPKAGSASDGVRSSSAT*SATGTR
Trigger: CCTCGTTCCTGTGGCTGACCACGTGGCCGAGGAGCT...CCGCACTCCATCACTGGCACTGCCTGCCTTGGGACCCGCTTCCCACCTGCTGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321878.10
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR CCA 90 bp GCAGCAGGTGGGAAGCGGGTCCCAAGGCAGGCAGTGCCAGTGATGGAGTGCGGCCACTGCAGCAGATGCTaGAGCTCCTCGGCCACGTGG +
Preference number: 4 (lower is better)
Translates to: AAGGKRVPRQAVPVMECGHCSRC*SSSATW
Trigger: CCACGTGGCCGAGGAGCTCCAGCATCTGCTGCAGTG...GCCGCACTCCATCACTGGCACTGCCTGCCTTGGGACCCGCTTCCCACCTGCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321878.10
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR CCA 90 bp TGGAGCTCCTCGGCCACGTGGTCAGCCACAGGAACGAGGGCGTCGGCCAGATGCCACTGCAGCAGATGCTaGAGCTCCTCGGCCACGTGG +
Preference number: 4 (lower is better)
Translates to: WSSSATWSATGTRASARCHCSRC*SSSATW
Trigger: CCACGTGGCCGAGGAGCTCCAGCATCTGCTGCAGTG...GCATCTGGCCGACGCCCTCGTTCCTGTGGCTGACCACGTGGCCGAGGAGCTCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp GGACTCGGGCTCACAGGGAACACCCGCACCCAGACCGTGCCGTCTGGCAGGCACCAGGAGTCCACGCGCTaGCGCAGAACGTTCCACTTC +
Preference number: 4 (lower is better)
Translates to: GLGLTGNTRTQTVPSGRHQESTR*RRTFHF
Trigger: GAAGTGGAACGTTCTGCGCCAGCGCGTGGACTCCTG...GTGCCTGCCAGACGGCACGGTCTGGGTGCGGGTGTTCCCTGTGAGCCCGAGTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp CCTCCTGAAGCGGACTCGGGCTCACAGGGAACACCCGCACCCAGACCGTGCCGTAGGTCCACGAGCAGATaGATCAGGCCCTGCACGGCG +
Preference number: 4 (lower is better)
Translates to: PPEADSGSQGTPAPRPCRRSTSR*IRPCTA
Trigger: CGCCGTGCAGGGCCTGATCCATCTGCTCGTGGACCT...ACGGCACGGTCTGGGTGCGGGTGTTCCCTGTGAGCCCGAGTCCGCTTCAGGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp CTGAAGCGGACTCGGGCTCACAGGGAACACCCGCACCCAGACCGTGCCGTCTGGAGGTCCACGAGCAGATaGATCAGGCCCTGCACGGCG +
Preference number: 4 (lower is better)
Translates to: LKRTRAHREHPHPDRAVWRSTSR*IRPCTA
Trigger: CGCCGTGCAGGGCCTGATCCATCTGCTCGTGGACCT...CCAGACGGCACGGTCTGGGTGCGGGTGTTCCCTGTGAGCCCGAGTCCGCTTCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp GCAGTGGGTTTATCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGAAGGTCCACGAGCAGATaGATCAGGCCCTGCACGGCG +
Preference number: 4 (lower is better)
Translates to: AVGLSASGGGGACRPRAGRSTSR*IRPCTA
Trigger: CGCCGTGCAGGGCCTGATCCATCTGCTCGTGGACCT...TCCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGATAAACCCACTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000443147.5
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR CCA 90 bp TCCACGAGCAGATGGATCAGGCCCTGCACGGCGACCACCAGGAGCCGGAGCAGGAGGTCCACGAGCAGATaGATCAGGCCCTGCACGGCG +
Preference number: 4 (lower is better)
Translates to: STSRWIRPCTATTRSRSRRSTSR*IRPCTA
Trigger: CGCCGTGCAGGGCCTGATCCATCTGCTCGTGGACCT...CCTGCTCCGGCTCCTGGTGGTCGCCGTGCAGGGCCTGATCCATCTGCTCGTGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000635909.1
ENST00000636657.1
ENST00000638143.1
CDS-3UTR CCA 90 bp CCTGGTGCTGCTGAGATGGGCGCTGCCTCCTCCCACCCACAGCGCGTCATCCCCGCGGCTGTAGGGCAGTaGGTTTATCCGCCAGCCTGT +
Preference number: 4 (lower is better)
Translates to: PGAAEMGAASSHPQRVIPAAVGQ*VYPPAC
Trigger: ACAGGCTGGCGGATAAACCCACTGCCCTACAGCCGC...GGGGATGACGCGCTGTGGGTGGGAGGAGGCAGCGCCCATCTCAGCAGCACCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000026218.9
CDS-3UTR CCA 90 bp CCGTGGACGAATAGGTACGGCTGGGTCAGTGGGCGGGCCCTTGACACTGAGGCTGCTGTGGCCGTGTGGTaGTGCCAGGCGAGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: PWTNRYGWVSGRALDTEAAVAVW*CQASQQ
Trigger: CTGCTGGCTCGCCTGGCACCACCACACGGCCACAGC...AGCCTCAGTGTCAAGGGCCCGCCCACTGACCCAGCCGTACCTATTCGTCCACGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp TGGTGCCAGGCGAGCCAGCAGTTCCCTCAGTCCTGCTTGTCCCCTCTCTGCCTCTGCGGCCAGCCTGGCTaGCCACCCCCACATCTGCTC +
Preference number: 4 (lower is better)
Translates to: WCQASQQFPQSCLSPLCLCGQPG*PPPHLL
Trigger: GAGCAGATGTGGGGGTGGCCAGCCAGGCTGGCCGCA...GAGGCAGAGAGGGGACAAGCAGGACTGAGGGAACTGCTGGCTCGCCTGGCACCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR CCA 90 bp GAACACCCGCACCCAGACCGTGCCGTCTGGCAGGCACTTTCGGCCTCAGTGCCAGGTGACCGCAGCAGGTaGGAAGCGGGTCCCAAGGCA +
Preference number: 4 (lower is better)
Translates to: EHPHPDRAVWQALSASVPGDRSR*EAGPKA
Trigger: TGCCTTGGGACCCGCTTCCCACCTGCTGCGGTCACC...TGGCACTGAGGCCGAAAGTGCCTGCCAGACGGCACGGTCTGGGTGCGGGTGTTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp GGCTCCCCTCCTGAAGCGGACTCGGGCTCACAGGGAACACCCGCACCCAGACCGAGTGCTCTGGACACCTaGGGTTGCTGTGCTCGCCAC +
Preference number: 4 (lower is better)
Translates to: GSPPEADSGSQGTPAPRPSALDT*GCCARH
Trigger: GTGGCGAGCACAGCAACCCCAGGTGTCCAGAGCACT...CGGTCTGGGTGCGGGTGTTCCCTGTGAGCCCGAGTCCGCTTCAGGAGGGGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp GGCAGTCCTGGTGCTGCTGAGATGGGCGCTGCCTCCTCCCACCCACAGCGCGTCAGTGCTCTGGACACCTaGGGTTGCTGTGCTCGCCAC +
Preference number: 4 (lower is better)
Translates to: GSPGAAEMGAASSHPQRVSALDT*GCCARH
Trigger: GTGGCGAGCACAGCAACCCCAGGTGTCCAGAGCACT...GACGCGCTGTGGGTGGGAGGAGGCAGCGCCCATCTCAGCAGCACCAGGACTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp CACCCGCACCCAGACCGTGCCGTCTGGCAGGCACTTTCGGCCTCAGTGCCACGGCATGGGGCAGTGCTCTaGACACCTGGGGTTGCTGTG +
Preference number: 4 (lower is better)
Translates to: HPHPDRAVWQALSASVPRHGAVL*TPGVAV
Trigger: CACAGCAACCCCAGGTGTCCAGAGCACTGCCCCATG...CCGTGGCACTGAGGCCGAAAGTGCCTGCCAGACGGCACGGTCTGGGTGCGGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp GGCAGTCCTGGTGCTGCTGAGATGGGCGCTGCCTCCTCCCACCCACAGCGCGTCTACACAGGGTGGGCATaGGGCAGTGCTCTGGACACC +
Preference number: 4 (lower is better)
Translates to: GSPGAAEMGAASSHPQRVYTGWA*GSALDT
Trigger: GGTGTCCAGAGCACTGCCCCATGCCCACCCTGTGTA...GACGCGCTGTGGGTGGGAGGAGGCAGCGCCCATCTCAGCAGCACCAGGACTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp GGGGCACCGTGGACGAATAGGTACGGCTGGGTCAGTGGGCGGGCCCTTGACACTCTGGGGCTGCTGTGGTaGACGGACCCTCTGGACCTG +
Preference number: 4 (lower is better)
Translates to: GAPWTNRYGWVSGRALDTLGLLW*TDPLDL
Trigger: CAGGTCCAGAGGGTCCGTCCACCACAGCAGCCCCAG...AGTGTCAAGGGCCCGCCCACTGACCCAGCCGTACCTATTCGTCCACGGTGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp GGTGGTGCCAGGCGAGCCAGCAGTTCCCTCAGTCCTGCTTGTCCCCTCTCTGCCCTGGGGCTGCTGTGGTaGACGGACCCTCTGGACCTG +
Preference number: 4 (lower is better)
Translates to: GGARRASSSLSPACPLSALGLLW*TDPLDL
Trigger: CAGGTCCAGAGGGTCCGTCCACCACAGCAGCCCCAG...GGCAGAGAGGGGACAAGCAGGACTGAGGGAACTGCTGGCTCGCCTGGCACCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000635205.1
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp GGTGGTGCCAGGCGAGCCAGCAGTTCCCTCAGTCCTGCTTGTCCCCTCTCTGCCCACCTGGGGCTGCTGTaGTGGACGGACCCTCTGGAC +
Preference number: 4 (lower is better)
Translates to: GGARRASSSLSPACPLSAHLGLL*WTDPLD
Trigger: GTCCAGAGGGTCCGTCCACCACAGCAGCCCCAGGTG...GGCAGAGAGGGGACAAGCAGGACTGAGGGAACTGCTGGCTCGCCTGGCACCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000635205.1
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp CCGTGGACGAATAGGTACGGCTGGGTCAGTGGGCGGGCCCTTGACACTGAGGCTGACCAGCCCTCCACCTaGGGCTGCTGTGGTGGACGG +
Preference number: 4 (lower is better)
Translates to: PWTNRYGWVSGRALDTEADQPST*GCCGGR
Trigger: CCGTCCACCACAGCAGCCCCAGGTGGAGGGCTGGTC...AGCCTCAGTGTCAAGGGCCCGCCCACTGACCCAGCCGTACCTATTCGTCCACGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp GGCCACGTGGTCAGCCACAGGAACGAGGGCGTCGGCCAGATGCCCGATGCGGCTGGCTTCCTCCTTCCCTaGGAGGCCCATGAAGGGAGA +
Preference number: 4 (lower is better)
Translates to: GHVVSHRNEGVGQMPDAAGFLLP*EAHEGR
Trigger: TCTCCCTTCATGGGCCTCCCAGGGAAGGAGGAAGCC...AGCCGCATCGGGCATCTGGCCGACGCCCTCGTTCCTGTGGCTGACCACGTGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp GTCCTGGTGCTGCTGAGATGGGCGCTGCCTCCTCCCACCCACAGCGCGTCATCCCCAGACCGTGCCGTCTaGCAGGCACTTTCGGCCTCA +
Preference number: 4 (lower is better)
Translates to: VLVLLRWALPPPTHSASSPDRAV*QALSAS
Trigger: TGAGGCCGAAAGTGCCTGCCAGACGGCACGGTCTGG...GGATGACGCGCTGTGGGTGGGAGGAGGCAGCGCCCATCTCAGCAGCACCAGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp GGTGCTGCTGAGATGGGCGCTGCCTCCTCCCACCCACAGCGCGTCATCCCCTCACCAGACCGTGCCGTCTaGCAGGCACTTTCGGCCTCA +
Preference number: 4 (lower is better)
Translates to: GAAEMGAASSHPQRVIPSPDRAV*QALSAS
Trigger: TGAGGCCGAAAGTGCCTGCCAGACGGCACGGTCTGG...TGAGGGGATGACGCGCTGTGGGTGGGAGGAGGCAGCGCCCATCTCAGCAGCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp CACCGTGGACGAATAGGTACGGCTGGGTCAGTGGGCGGGCCCTTGACACTGAGGCGGCTTCCCCGGTGCTaGGTTGCCAGGGAGTCCCAG +
Preference number: 4 (lower is better)
Translates to: HRGRIGTAGSVGGPLTLRRLPRC*VARESQ
Trigger: CTGGGACTCCCTGGCAACCCAGCACCGGGGAAGCCG...CCTCAGTGTCAAGGGCCCGCCCACTGACCCAGCCGTACCTATTCGTCCACGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp AGAGCCAGGAGGGCAACGCTGATCTCAGGGACCACAAGGGAGATACCAGGACGCGGTTGGGGACCCCGATaGGCGGGCCCGGGCAGACGA +
Preference number: 4 (lower is better)
Translates to: RARRATLISGTTREIPGRGWGPR*AGPGRR
Trigger: TCGTCTGCCCGGGCCCGCCCATCGGGGTCCCCAACC...GCGTCCTGGTATCTCCCTTGTGGTCCCTGAGATCAGCGTTGCCCTCCTGGCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422307.6
CDS-3UTR CCA 90 bp CCTCAGGCCCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGAGGACAAGAACAAAGGCCTGTaGCCTCAGGTCTCCAGGGTT +
Preference number: 4 (lower is better)
Translates to: PQALHQEAEGPAGLVPEDKNKGL*PQVSRV
Trigger: AACCCTGGAGACCTGAGGCCACAGGCCTTTGTTCTT...GTCCTCCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGGGCCTGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420990.6
CDS-3UTR CCA 90 bp GGTGGTGCCAGGCGAGCCAGCAGTTCCCTCAGTCCTGCTTGTCCCCTCTCTGCCCTTCACGCCAGTGGATaGTGGCCGCCCTGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: GGARRASSSLSPACPLSALHASG*WPPCWL
Trigger: GAGCCAGCAGGGCGGCCACCATCCACTGGCGTGAAG...GGCAGAGAGGGGACAAGCAGGACTGAGGGAACTGCTGGCTCGCCTGGCACCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443147.5
CDS-3UTR CCA 90 bp TCCACAGAGGCCCGAGGGTGGGCCAAAGAGTCAGGTACCACCCCCAGCAGGAAGGGCTTTGTGGGGCGGTaGCTCTGGCCCGGGAAGGCT +
Preference number: 4 (lower is better)
Translates to: STEARGWAKESGTTPSRKGFVGR*LWPGKA
Trigger: AGCCTTCCCGGGCCAGAGCCACCGCCCCACAAAGCC...CTTCCTGCTGGGGGTGGTACCTGACTCTTTGGCCCACCCTCGGGCCTCTGTGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
3UTR CAA 72 bp AAGCGGCCCAGCACCTGGTCCAGTGCACGGTTCATCTaGAGCCCGGCGGGAGCACCCATCAGCCACTGCAGC +
Preference number: 4 (lower is better)
Translates to: KRPSTWSSARFI*SPAGAPISHCS
Trigger: GCTGCAGTGGCTGATGGGTGCTCCCGCCGGGCTCAAGATGAACCGTGCACTGGACCAGGTGCTGGGCCGCTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635909.1
ENST00000636657.1
CDS-3UTR TCA 90 bp GATGGCTGGCTGTGGCCGTGTGGTGGTGCCAGGCGAGCCAGCAGTTCCCTCAGTGCAGGCACTGACAGCTaGGACCAGCGACAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: DGWLWPCGGARRASSSLSAGTDS*DQRQQA
Trigger: AGCCTGCTGTCGCTGGTCTCAGCTGTCAGTGCCTGC...ACTGAGGGAACTGCTGGCTCGCCTGGCACCACCACACGGCCACAGCCAGCCATC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443147.5
ENST00000636005.1
ENST00000636657.1
CDS-3UTR TCA 90 bp CTCACAGGGAACACCCGCACCCAGACCGTGCCGTCTGGCAGGCACTTTCGGCCTGGAGCCGGAGCAGGGTaGACACCAGGTAGTACAGGG +
Preference number: 4 (lower is better)
Translates to: LTGNTRTQTVPSGRHFRPGAGAG*TPGSTG
Trigger: CCCTGTACTACCTGGTGTTCACCCTGCTCCGGCTCC...AGGCCGAAAGTGCCTGCCAGACGGCACGGTCTGGGTGCGGGTGTTCCCTGTGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR TCA 90 bp CACAGGGAACACCCGCACCCAGACCGTGCCGTCTGGCAGGCACTTTCGGCCTCAGGAGCCGGAGCAGGGTaGACACCAGGTAGTACAGGG +
Preference number: 4 (lower is better)
Translates to: HREHPHPDRAVWQALSASGAGAG*TPGSTG
Trigger: CCCTGTACTACCTGGTGTTCACCCTGCTCCGGCTCC...TGAGGCCGAAAGTGCCTGCCAGACGGCACGGTCTGGGTGCGGGTGTTCCCTGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR TCA 90 bp GTGGCCGTGTGGTGGTGCCAGGCGAGCCAGCAGTTCCCTCAGTCCTGCTTGTCCGGAGCCGGAGCAGGGTaGACACCAGGTAGTACAGGG +
Preference number: 4 (lower is better)
Translates to: VAVWWCQASQQFPQSCLSGAGAG*TPGSTG
Trigger: CCCTGTACTACCTGGTGTTCACCCTGCTCCGGCTCC...GGACAAGCAGGACTGAGGGAACTGCTGGCTCGCCTGGCACCACCACACGGCCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000443147.5
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR TCA 90 bp AGCAGATGGCTGGCTGTGGCCGTGTGGTGGTGCCAGGCGAGCCAGCAGTTCCCTGGAGCCGGAGCAGGGTaGACACCAGGTAGTACAGGG +
Preference number: 4 (lower is better)
Translates to: SRWLAVAVWWCQASQQFPGAGAG*TPGSTG
Trigger: CCCTGTACTACCTGGTGTTCACCCTGCTCCGGCTCC...AGGGAACTGCTGGCTCGCCTGGCACCACCACACGGCCACAGCCAGCCATCTGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000443147.5
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR TCA 90 bp GAAGAAGCGGCCCAGCACCTGGTCCAGTGCACGGTTCATCTTGAGCCCGGCGGGGGAGCCGGAGCAGGGTaGACACCAGGTAGTACAGGG +
Preference number: 4 (lower is better)
Translates to: EEAAQHLVQCTVHLEPGGGAGAG*TPGSTG
Trigger: CCCTGTACTACCTGGTGTTCACCCTGCTCCGGCTCC...CCCGCCGGGCTCAAGATGAACCGTGCACTGGACCAGGTGCTGGGCCGCTTCTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000635909.1
ENST00000636657.1
ENST00000638143.1
CDS-3UTR TCA 90 bp GCACCTGCAGGCTCCCCTCCTGAAGCGGACTCGGGCTCACAGGGAACACCCGCAGAGCCGAAGACCCAGTaGGTACAGCGGCAGGGAGTT +
Preference number: 4 (lower is better)
Translates to: APAGSPPEADSGSQGTPAEPKTQ*VQRQGV
Trigger: AACTCCCTGCCGCTGTACTCACTGGGTCTTCGGCTC...TGCGGGTGTTCCCTGTGAGCCCGAGTCCGCTTCAGGAGGGGAGCCTGCAGGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR TCA 90 bp GTGGGTTTATCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGAGGAGAGCCGAAGACCCAGTaGGTACAGCGGCAGGGAGTT +
Preference number: 4 (lower is better)
Translates to: VGLSASGGGGACRPRAGGEPKTQ*VQRQGV
Trigger: AACTCCCTGCCGCTGTACTCACTGGGTCTTCGGCTC...TCCTCCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGATAAACCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443147.5
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
ENST00000637468.1
CDS-3UTR TCA 90 bp GAGCAGATGGCTGGCTGTGGCCGTGTGGTGGTGCCAGGCGAGCCAGCAGTTCCCGAGCCGAAGACCCAGTaGGTACAGCGGCAGGGAGTT +
Preference number: 4 (lower is better)
Translates to: EQMAGCGRVVVPGEPAVPEPKTQ*VQRQGV
Trigger: AACTCCCTGCCGCTGTACTCACTGGGTCTTCGGCTC...GGGAACTGCTGGCTCGCCTGGCACCACCACACGGCCACAGCCAGCCATCTGCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000321878.10
ENST00000443147.5
ENST00000540241.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR TCA 90 bp ATGGAGTGCGGCCAGCCTGGCTGGCCACCCCCACATCTGCTCACTCCCAATGACAGGACATGCGCCAGCTaGGCTGGTGCCACCCTGGCA +
Preference number: 4 (lower is better)
Translates to: MECGQPGWPPPHLLTPNDRTCAS*AGATLA
Trigger: TGCCAGGGTGGCACCAGCTCAGCTGGCGCATGTCCT...GTCATTGGGAGTGAGCAGATGTGGGGGTGGCCAGCCAGGCTGGCCGCACTCCAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000321878.10
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR TCA 90 bp GCATGGGGCAGTGCTCTGGACACCTGGGGTTGCTGTGCTCGCCACCATGGTGACAGGACATGCGCCAGCTaGGCTGGTGCCACCCTGGCA +
Preference number: 4 (lower is better)
Translates to: AWGSALDTWGCCARHHGDRTCAS*AGATLA
Trigger: TGCCAGGGTGGCACCAGCTCAGCTGGCGCATGTCCT...GTCACCATGGTGGCGAGCACAGCAACCCCAGGTGTCCAGAGCACTGCCCCATGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321878.10
ENST00000635205.1
ENST00000635909.1
ENST00000636657.1
CDS-3UTR TCA 90 bp GGGGAGGCGGTAGGTGTGCACCACGCGGCTGTAGGGCAGTGGGTTTATCTGCATGGCAGGCAGTGCCAGTaGTGGAGTGCGGCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: GEAVGVHHAAVGQWVYLHGRQCQ*WSAASL
Trigger: CAGGCTGGCCGCACTCCATCACTGGCACTGCCTGCC...ATGCAGATAAACCCACTGCCCTACAGCCGCGTGGTGCACACCTACCGCCTCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR TCA 90 bp ATGGAGTGCGGCCAGCCTGGCTGGCCACCCCCACATCTGCTCACTCCCAATGACTGCAGGCTCCCCTCCTaGAGCGGACTCGGGCTCACA +
Preference number: 4 (lower is better)
Translates to: MECGQPGWPPPHLLTPNDCRLPS*SGLGLT
Trigger: TGTGAGCCCGAGTCCGCTTCAGGAGGGGAGCCTGCA...GTCATTGGGAGTGAGCAGATGTGGGGGTGGCCAGCCAGGCTGGCCGCACTCCAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR TCA 90 bp GGACGAATAGGTACGGCTGGGTCAGTGGGCGGGCCCTTGACACTGAGGCTGCTCCAGTCCTGGTGCTGCTaGGATGGGCGCTGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: GRIGTAGSVGGPLTLRLLQSWCC*DGRCLL
Trigger: GAGGAGGCAGCGCCCATCTCAGCAGCACCAGGACTG...GAGCAGCCTCAGTGTCAAGGGCCCGCCCACTGACCCAGCCGTACCTATTCGTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR TCA 90 bp CCGTGGACGAATAGGTACGGCTGGGTCAGTGGGCGGGCCCTTGACACTGAGGCTCAGTCCTGGTGCTGCTaGGATGGGCGCTGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: PWTNRYGWVSGRALDTEAQSWCC*DGRCLL
Trigger: GAGGAGGCAGCGCCCATCTCAGCAGCACCAGGACTG...AGCCTCAGTGTCAAGGGCCCGCCCACTGACCCAGCCGTACCTATTCGTCCACGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR TCA 90 bp GCCGTGTGGTGGTGCCAGGCGAGCCAGCAGTTCCCTCAGTCCTGCTTGTCCCCTAGGTCTCCAGGGTTCTaGACCCGCCAGCCTGTAGGG +
Preference number: 4 (lower is better)
Translates to: AVWWCQASQQFPQSCLSPRSPGF*TRQPVG
Trigger: CCCTACAGGCTGGCGGGTTCAGAACCCTGGAGACCT...AGGGGACAAGCAGGACTGAGGGAACTGCTGGCTCGCCTGGCACCACCACACGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443147.5
CDS-3UTR GCA 90 bp AGAGCCAGGAGGGCAACGCTGATCTCAGGGACCACAAGGGAGATACCAGGACGCACCACGGCGCTGCTCTaGTCCGGCACCCACCGTCCC +
Preference number: 4 (lower is better)
Translates to: RARRATLISGTTREIPGRTTALL*SGTHRP
Trigger: GGGACGGTGGGTGCCGGAGCAGAGCAGCGCCGTGGT...GCGTCCTGGTATCTCCCTTGTGGTCCCTGAGATCAGCGTTGCCCTCCTGGCTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR GCA 90 bp GGAGGGCCGTGTCTCCAGAGCATGGAGAAGGTAGAACTGGCTTTGTGGGGCGGTCCAGGACCACGGCGCTaGTCTGCTCCGGCACCCACC +
Preference number: 4 (lower is better)
Translates to: GGPCLQSMEKVELALWGGPGPRR*SAPAPT
Trigger: GGTGGGTGCCGGAGCAGAGCAGCGCCGTGGTCCTGG...ACCGCCCCACAAAGCCAGTTCTACCTTCTCCATGCTCTGGAGACACGGCCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470411.2
CDS-3UTR GCA 90 bp CCTCCTGAAGCGGACTCGGGCTCACAGGGAACACCCGCACCCAGACCGTGCCGTGGGATGAAGGGAAAGTaGAGGACCGCCAGGACCACG +
Preference number: 4 (lower is better)
Translates to: PPEADSGSQGTPAPRPCRGMKGK*RTARTT
Trigger: CGTGGTCCTGGCGGTCCTGCACTTTCCCTTCATCCC...ACGGCACGGTCTGGGTGCGGGTGTTCCCTGTGAGCCCGAGTCCGCTTCAGGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000636657.1
CDS-3UTR GCA 90 bp GCAGCAGGTGGGAAGCGGGTCCCAAGGCAGGCAGTGCCAGTGATGGAGTGCGGCGGGATGAAGGGAAAGTaGAGGACCGCCAGGACCACG +
Preference number: 4 (lower is better)
Translates to: AAGGKRVPRQAVPVMECGGMKGK*RTARTT
Trigger: CGTGGTCCTGGCGGTCCTGCACTTTCCCTTCATCCC...GCCGCACTCCATCACTGGCACTGCCTGCCTTGGGACCCGCTTCCCACCTGCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321878.10
ENST00000636657.1
CDS-3UTR GCA 90 bp CTGCAGAGGAGGGGGCTGCACCCGGCTGGAAACGGGGCACAGACCATGCAGGGAGGGATGAAGGGAAAGTaGAGGACCGCCAGGACCACG +
Preference number: 4 (lower is better)
Translates to: LQRRGLHPAGNGAQTMQGGMKGK*RTARTT
Trigger: CGTGGTCCTGGCGGTCCTGCACTTTCCCTTCATCCC...TCCCTGCATGGTCTGTGCCCCGTTTCCAGCCGGGTGCAGCCCCCTCCTCTGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR GCA 90 bp GGCCGTGTGGTGGTGCCAGGCGAGCCAGCAGTTCCCTCAGTCCTGCTTGTCCCCACCTGGGCCAGGAGCTaGTTGACCTGGATGGGGATG +
Preference number: 4 (lower is better)
Translates to: GRVVVPGEPAVPSVLLVPTWARS*LTWMGM
Trigger: CATCCCCATCCAGGTCAAGCAGCTCCTGGCCCAGGT...GGGGACAAGCAGGACTGAGGGAACTGCTGGCTCGCCTGGCACCACCACACGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443147.5
ENST00000636657.1
CDS-3UTR GCA 90 bp CCAGAGAGCCAGGAGGGCAACGCTGATCTCAGGGACCACAAGGGAGATACCAGGGGCAGTGGCACCAGGTaGCCAGCACGGCCACGCCCA +
Preference number: 4 (lower is better)
Translates to: PESQEGNADLRDHKGDTRGSGTR*PARPRP
Trigger: TGGGCGTGGCCGTGCTGGGCACCTGGTGCCACTGCC...CCTGGTATCTCCCTTGTGGTCCCTGAGATCAGCGTTGCCCTCCTGGCTCTCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR GCA 90 bp GGTCTAGGACAAAGTAGGCCGGTGGCAGGTGCGGACGACCACAGGCAAAGCTGCCTCTCCTCGGGCTCCTaGCGGCAGTGGCACCAGGTG +
Preference number: 4 (lower is better)
Translates to: GLGQSRPVAGADDHRQSCLSSGS*RQWHQV
Trigger: CACCTGGTGCCACTGCCGGCAGGAGCCCGAGGAGAG...GCAGCTTTGCCTGTGGTCGTCCGCACCTGCCACCGGCCTACTTTGTCCTAGACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR GCA 90 bp CCAAGCCCAAGGTGTGATAGCAGGGCCTGCCGTGTTCAGGAGCACACAGCAGCGCTCTCCTCGGGCTCCTaGCGGCAGTGGCACCAGGTG +
Preference number: 4 (lower is better)
Translates to: PSPRCDSRACRVQEHTAALSSGS*RQWHQV
Trigger: CACCTGGTGCCACTGCCGGCAGGAGCCCGAGGAGAG...CGCTGCTGTGTGCTCCTGAACACGGCAGGCCCTGCTATCACACCTTGGGCTTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321878.10
ENST00000636657.1
CDS-3UTR GCA 90 bp TCCACAGAGGCCCGAGGGTGGGCCAAAGAGTCAGGTACCACCCCCAGCAGGAAGCGCAGCTCCAGAACGTaGCGCCTCTCTCCCGGCACA +
Preference number: 4 (lower is better)
Translates to: STEARGWAKESGTTPSRKRSSRT*RLSPGT
Trigger: TGTGCCGGGAGAGAGGCGGCACGTTCTGGAGCTGCG...CTTCCTGCTGGGGGTGGTACCTGACTCTTTGGCCCACCCTCGGGCCTCTGTGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR GCA 90 bp GAGCAGATGGCTGGCTGTGGCCGTGTGGTGGTGCCAGGCGAGCCAGCAGTTCCCGAGCACCTCACTGCGTaGTACCGTGTCGAAGACGGC +
Preference number: 4 (lower is better)
Translates to: EQMAGCGRVVVPGEPAVPEHLTA*YRVEDG
Trigger: GCCGTCTTCGACACGGTAGCACGCAGTGAGGTGCTC...GGGAACTGCTGGCTCGCCTGGCACCACCACACGGCCACAGCCAGCCATCTGCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321878.10
ENST00000443147.5
ENST00000636657.1
CDS-3UTR GCA 90 bp CTGCAGAGGAGGGGGCTGCACCCGGCTGGAAACGGGGCACAGACCATGCAGGGAGAGCACCTCACTGCGTaGTACCGTGTCGAAGACGGC +
Preference number: 4 (lower is better)
Translates to: LQRRGLHPAGNGAQTMQGEHLTA*YRVEDG
Trigger: GCCGTCTTCGACACGGTAGCACGCAGTGAGGTGCTC...TCCCTGCATGGTCTGTGCCCCGTTTCCAGCCGGGTGCAGCCCCCTCCTCTGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR GCA 90 bp CTTCCTGGAAGGGAGGTCCGGCCCGGCCGGCATGAGGGTGGCCAGCACAGCCTGCATCAAAGCGGTCACTaGGGAAGAGCACCTCACTGC +
Preference number: 4 (lower is better)
Translates to: LPGREVRPGRHEGGQHSLHQSGH*GRAPHC
Trigger: GCAGTGAGGTGCTCTTCCGCAGTGACCGCTTTGATG...CAGGCTGTGCTGGCCACCCTCATGCCGGCCGGGCCGGACCTCCCTTCCAGGAAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470411.2
CDS-3UTR GCA 90 bp CCAAGCCCAAGGTGTGATAGCAGGGCCTGCCGTGTTCAGGAGCACACAGCAGCGTCCACGCCCTCCGACTaGCAGTGGCTCAGCCGCACG +
Preference number: 4 (lower is better)
Translates to: PSPRCDSRACRVQEHTAASTPSD*QWLSRT
Trigger: CGTGCGGCTGAGCCACTGGCAGTCGGAGGGCGTGGA...CGCTGCTGTGTGCTCCTGAACACGGCAGGCCCTGCTATCACACCTTGGGCTTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321878.10
ENST00000636657.1
CDS-3UTR GCA 90 bp GGGTTTATCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGAGGACACGCACGTGGAGAGTTTaGTCCCGAGGAAGGACAGGG +
Preference number: 4 (lower is better)
Translates to: GFICIRRRRGLPASCRRTRTWRV*SRGRTG
Trigger: CCCTGTCCTTCCTCGGGAGCAAACTCTCCACGTGCG...TGTCCTCCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGATAAACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443147.5
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
ENST00000637468.1
CDS-3UTR GCA 90 bp TGTGGCCGTGTGGTGGTGCCAGGCGAGCCAGCAGTTCCCTCAGTCCTGCTTGTCAGGTGCTCCAGCCGGTaGCGGAGCTGTTCGCACGTG +
Preference number: 4 (lower is better)
Translates to: CGRVVVPGEPAVPSVLLVRCSSR*RSCSHV
Trigger: CACGTGCGAACAGCTCCGGCACCGGCTGGAGCACCT...GACAAGCAGGACTGAGGGAACTGCTGGCTCGCCTGGCACCACCACACGGCCACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000443147.5
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR GCA 90 bp GTGGGTTTATCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGAGGAAAGATTAGCGTGAGGTaGTCCAGCCGGTGCCGGAGC +
Preference number: 4 (lower is better)
Translates to: VGLSASGGGGACRPRAGGKISVR*SSRCRS
Trigger: GCTCCGGCACCGGCTGGAGCACCTCACGCTAATCTT...TCCTCCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGATAAACCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443147.5
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
ENST00000637468.1
CDS-3UTR GCA 90 bp GGCCTGGCCACAAGCAGGCCCAGTGCACACCTGCAGCCCACACAAGACCCACCCAAGATTAGCGTGAGGTaGTCCAGCCGGTGCCGGAGC +
Preference number: 4 (lower is better)
Translates to: GLATSRPSAHLQPTQDPPKISVR*SSRCRS
Trigger: GCTCCGGCACCGGCTGGAGCACCTCACGCTAATCTT...GGGTGGGTCTTGTGTGGGCTGCAGGTGTGCACTGGGCCTGCTTGTGGCCAGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR GCA 90 bp AGCCCAAGGTGTGATAGCAGGGCCTGCCGTGTTCAGGAGCACACAGCAGCGTCCCGGCCAGATGCCCGATaGGGCTTCTCCCGTGGAGCC +
Preference number: 4 (lower is better)
Translates to: SPRCDSRACRVQEHTAASRPDAR*GFSRGA
Trigger: GGCTCCACGGGAGAAGCCGCATCGGGCATCTGGCCG...GGACGCTGCTGTGTGCTCCTGAACACGGCAGGCCCTGCTATCACACCTTGGGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321878.10
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR GCA 90 bp AGGGAGTTGATGAGGTCCACGAGCAGATGGATCAGGCCCTGCACGGCGACCACCAGGGCGTCGGCCAGATaGCCGATGCGGCTTCTCCCG +
Preference number: 4 (lower is better)
Translates to: RELMRSTSRWIRPCTATTRASAR*PMRLLP
Trigger: CGGGAGAAGCCGCATCGGGCATCTGGCCGACGCCCT...GGTGGTCGCCGTGCAGGGCCTGATCCATCTGCTCGTGGACCTCATCAACTCCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000635909.1
ENST00000636657.1
ENST00000637468.1
ENST00000638143.1
CDS-3UTR GCA 90 bp CACCAGGAGCCGGAGCAGGGTGAACACCAGGTAGTACAGGGCTGTGGTAGGCAGAGGGCGTCGGCCAGATaGCCGATGCGGCTTCTCCCG +
Preference number: 4 (lower is better)
Translates to: HQEPEQGEHQVVQGCGRQRASAR*PMRLLP
Trigger: CGGGAGAAGCCGCATCGGGCATCTGGCCGACGCCCT...CTGCCTACCACAGCCCTGTACTACCTGGTGTTCACCCTGCTCCGGCTCCTGGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000635909.1
ENST00000636657.1
ENST00000638143.1
CDS-3UTR GCA 90 bp AGAGCAGATGGCTGGCTGTGGCCGTGTGGTGGTGCCAGGCGAGCCAGCAGTTCCAGCCACTGCAGCAGATaGTGGAGCTCCTCGGCCACG +
Preference number: 4 (lower is better)
Translates to: RADGWLWPCGGARRASSSSHCSR*WSSSAT
Trigger: CGTGGCCGAGGAGCTCCAGCATCTGCTGCAGTGGCT...GGAACTGCTGGCTCGCCTGGCACCACCACACGGCCACAGCCAGCCATCTGCTCT
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321878.10
ENST00000443147.5
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR GCA 90 bp CACGGAACTTCACGCCAGCCGCCAGCCTGTAGGGCCGGCAGAGCCGAAGACCCAGCACCCATCAGCCACTaGAGCAGATGCTGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: HGTSRQPPACRAGRAEDPAPISH*SRCWSS
Trigger: GGAGCTCCAGCATCTGCTGCAGTGGCTGATGGGTGC...TGGGTCTTCGGCTCTGCCGGCCCTACAGGCTGGCGGCTGGCGTGAAGTTCCGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
ENST00000637468.1
CDS-3UTR GCA 90 bp CTGAAGCGGACTCGGGCTCACAGGGAACACCCGCACCCAGACCGTGCCGTCTGGGCACCCATCAGCCACTaGAGCAGATGCTGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: LKRTRAHREHPHPDRAVWAPISH*SRCWSS
Trigger: GGAGCTCCAGCATCTGCTGCAGTGGCTGATGGGTGC...CCAGACGGCACGGTCTGGGTGCGGGTGTTCCCTGTGAGCCCGAGTCCGCTTCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp CCTGGTGCTGCTGAGATGGGCGCTGCCTCCTCCCACCCACAGCGCGTCATCCCCCAGCACCTGGTCCAGTaGACGGTTCATCTTGAGCCC +
Preference number: 4 (lower is better)
Translates to: PGAAEMGAASSHPQRVIPQHLVQ*TVHLEP
Trigger: GGGCTCAAGATGAACCGTGCACTGGACCAGGTGCTG...GGGGATGACGCGCTGTGGGTGGGAGGAGGCAGCGCCCATCTCAGCAGCACCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp CTCGTGCCGGAGGACACGGAACTTCACGCCAGCCGCCAGCCTGTAGGGCCGGCACAGCACCTGGTCCAGTaGACGGTTCATCTTGAGCCC +
Preference number: 4 (lower is better)
Translates to: LVPEDTELHASRQPVGPAQHLVQ*TVHLEP
Trigger: GGGCTCAAGATGAACCGTGCACTGGACCAGGTGCTG...TGCCGGCCCTACAGGCTGGCGGCTGGCGTGAAGTTCCGTGTCCTCCGGCACGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR GCA 90 bp CGGCCCAGCACCTGGTCCAGTGCACGGTTCATCTTGAGCCCGGCGGGAGCACCCCAGCACCTGGTCCAGTaGACGGTTCATCTTGAGCCC +
Preference number: 4 (lower is better)
Translates to: RPSTWSSARFILSPAGAPQHLVQ*TVHLEP
Trigger: GGGCTCAAGATGAACCGTGCACTGGACCAGGTGCTG...GGGTGCTCCCGCCGGGCTCAAGATGAACCGTGCACTGGACCAGGTGCTGGGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000635909.1
ENST00000636657.1
ENST00000638143.1
CDS-3UTR GCA 90 bp AATAGGTACGGCTGGGTCAGTGGGCGGGCCCTTGACACTGAGGCTGCTCCCGCCGCCGAGAGGCCCACGTaGCAAAGGATGTGCTCCACG +
Preference number: 4 (lower is better)
Translates to: NRYGWVSGRALDTEAAPAAERPT*QRMCST
Trigger: CGTGGAGCACATCCTTTGGCACGTGGGCCTCTCGGC...GGCGGGAGCAGCCTCAGTGTCAAGGGCCCGCCCACTGACCCAGCCGTACCTATT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp GAGTGCGGCCAGCCTGGCTGGCCACCCCCACATCTGCTCACTCCCAATGACCTCGCCGAGAGGCCCACGTaGCAAAGGATGTGCTCCACG +
Preference number: 4 (lower is better)
Translates to: ECGQPGWPPPHLLTPNDLAERPT*QRMCST
Trigger: CGTGGAGCACATCCTTTGGCACGTGGGCCTCTCGGC...GAGGTCATTGGGAGTGAGCAGATGTGGGGGTGGCCAGCCAGGCTGGCCGCACTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321878.10
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR GCA 90 bp GTGCACCACGCGGCTGTAGGGCAGTGGGTTTATCTGCATCAGGAGGCGGAGGGGGTGGCCGTGTGGTGGTaGCAGGCGAGCCAGCAGTTC +
Preference number: 4 (lower is better)
Translates to: VHHAAVGQWVYLHQEAEGVAVWW*QASQQF
Trigger: GAACTGCTGGCTCGCCTGGCACCACCACACGGCCAC...CCCCTCCGCCTCCTGATGCAGATAAACCCACTGCCCTACAGCCGCGTGGTGCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000443147.5
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR GCA 90 bp AATAGGTACGGCTGGGTCAGTGGGCGGGCCCTTGACACTGAGGCTGCTCCCGCCCGCCAGCTGAGCTGGTaGCACCCTGGCAGAGCAGAT +
Preference number: 4 (lower is better)
Translates to: NRYGWVSGRALDTEAAPARQLSW*HPGRAD
Trigger: ATCTGCTCTGCCAGGGTGGCACCAGCTCAGCTGGCG...GGCGGGAGCAGCCTCAGTGTCAAGGGCCCGCCCACTGACCCAGCCGTACCTATT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp AGAGCAGATGGCTGGCTGTGGCCGTGTGGTGGTGCCAGGCGAGCCAGCAGTTCCCGCCAGCTGAGCTGGTaGCACCCTGGCAGAGCAGAT +
Preference number: 4 (lower is better)
Translates to: RADGWLWPCGGARRASSSRQLSW*HPGRAD
Trigger: ATCTGCTCTGCCAGGGTGGCACCAGCTCAGCTGGCG...GGAACTGCTGGCTCGCCTGGCACCACCACACGGCCACAGCCAGCCATCTGCTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000321878.10
ENST00000540241.1
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR GCA 90 bp GGGACGGGGGTCAGCGACTGCTTCAATCCCCCAGATGCAGGGTGCTGTTCGGCTGTGCCAGTGATGGAGTaGGGCCAGCCTGGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: GTGVSDCFNPPDAGCCSAVPVME*GQPGWP
Trigger: TGGCCAGCCAGGCTGGCCGCACTCCATCACTGGCAC...AGCCGAACAGCACCCTGCATCTGGGGGATTGAAGCAGTCGCTGACCCCCGTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp GCACCTGCAGGCTCCCCTCCTGAAGCGGACTCGGGCTCACAGGGAACACCCGCACTGGACACCTGGGGTTaGTGTGCTCGCCACCATGGT +
Preference number: 4 (lower is better)
Translates to: APAGSPPEADSGSQGTPALDTWG*CARHHG
Trigger: ACCATGGTGGCGAGCACAGCAACCCCAGGTGTCCAG...TGCGGGTGTTCCCTGTGAGCCCGAGTCCGCTTCAGGAGGGGAGCCTGCAGGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp GGGTTTATCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGAGGACACTGGACACCTGGGGTTaGTGTGCTCGCCACCATGGT +
Preference number: 4 (lower is better)
Translates to: GFICIRRRRGLPASCRRTLDTWG*CARHHG
Trigger: ACCATGGTGGCGAGCACAGCAACCCCAGGTGTCCAG...TGTCCTCCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGATAAACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR GCA 90 bp ACGAGCAGATGGATCAGGCCCTGCACGGCGACCACCAGGAGCCGGAGCAGGGTGCTGGACACCTGGGGTTaGTGTGCTCGCCACCATGGT +
Preference number: 4 (lower is better)
Translates to: TSRWIRPCTATTRSRSRVLDTWG*CARHHG
Trigger: ACCATGGTGGCGAGCACAGCAACCCCAGGTGTCCAG...CACCCTGCTCCGGCTCCTGGTGGTCGCCGTGCAGGGCCTGATCCATCTGCTCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp GGAGCACACAGCAGCGTCCACAAAGCACAGGACATGCGCCAGCTGAGCTGGTGCCCCTCCACCTGGGGCTaGTGTGGTGGACGGACCCTC +
Preference number: 4 (lower is better)
Translates to: GAHSSVHKAQDMRQLSWCPSTWG*CGGRTL
Trigger: GAGGGTCCGTCCACCACAGCAGCCCCAGGTGGAGGG...GCACCAGCTCAGCTGGCGCATGTCCTGTGCTTTGTGGACGCTGCTGTGTGCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321878.10
ENST00000635205.1
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp GGCAGTCCTGGTGCTGCTGAGATGGGCGCTGCCTCCTCCCACCCACAGCGCGTCACGGGGGTCAGCGACTaGTTCAATCCCCCAGATGCA +
Preference number: 4 (lower is better)
Translates to: GSPGAAEMGAASSHPQRVTGVSD*FNPPDA
Trigger: TGCATCTGGGGGATTGAAGCAGTCGCTGACCCCCGT...GACGCGCTGTGGGTGGGAGGAGGCAGCGCCCATCTCAGCAGCACCAGGACTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp CCGCCAGCCTGTAGGGCCGGCAGAGCCGAAGACCCAGTGAGTACAGCGGCAGGGACAGCAGCCTGGCGATaGTCACAGCCTGCTGATGGT +
Preference number: 4 (lower is better)
Translates to: PPACRAGRAEDPVSTAAGTAAWR*SQPADG
Trigger: ACCATCAGCAGGCTGTGAGCATCGCCAGGCTGCTGT...CCCTGCCGCTGTACTCACTGGGTCTTCGGCTCTGCCGGCCCTACAGGCTGGCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp GAAGCGGACTCGGGCTCACAGGGAACACCCGCACCCAGACCGTGCCGTCTGGCAGGCCACAGAGGTGTCTaGACAGCAGGGCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: EADSGSQGTPAPRPCRLAGHRGV*TAGLPP
Trigger: AGGAGGAAGCCCTGCTGTGCAGACACCTCTGTGGCC...TGCCAGACGGCACGGTCTGGGTGCGGGTGTTCCCTGTGAGCCCGAGTCCGCTTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp CCGTGGACGAATAGGTACGGCTGGGTCAGTGGGCGGGCCCTTGACACTGAGGCTCCCGCACCCAGACCGTaGCGTCTGGCAGGCACTTTC +
Preference number: 4 (lower is better)
Translates to: PWTNRYGWVSGRALDTEAPAPRP*RLAGTF
Trigger: GAAAGTGCCTGCCAGACGGCACGGTCTGGGTGCGGG...AGCCTCAGTGTCAAGGGCCCGCCCACTGACCCAGCCGTACCTATTCGTCCACGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp TGGGGAGGCGGTAGGTGTGCACCACGCGGCTGTAGGGCAGTGGGTTTATCTGCAGGCCTGCCGGCCTCGTaGCGGAGGACACGGAACTTC +
Preference number: 4 (lower is better)
Translates to: WGGGRCAPRGCRAVGLSAGLPAS*RRTRNF
Trigger: GAAGTTCCGTGTCCTCCGGCACGAGGCCGGCAGGCC...TGCAGATAAACCCACTGCCCTACAGCCGCGTGGTGCACACCTACCGCCTCCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443147.5
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR GCA 90 bp CCAGAGAGCCAGGAGGGCAACGCTGATCTCAGGGACCACAAGGGAGATACCAGGCCGGGAAGGCTCTGCTaGCCAGGAGGGGTCCCCACG +
Preference number: 4 (lower is better)
Translates to: PESQEGNADLRDHKGDTRPGRLC*PGGVPT
Trigger: CGTGGGGACCCCTCCTGGGCAGCAGAGCCTTCCCGG...CCTGGTATCTCCCTTGTGGTCCCTGAGATCAGCGTTGCCCTCCTGGCTCTCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR GCA 90 bp GAAGGCCCAGAGGCAGCATGGAAATGCACTAGATCTGCAGAGGAGGGGGCTGCAGGCCCGGGAAGGCTCTaGTGCCCAGGAGGGGTCCCC +
Preference number: 4 (lower is better)
Translates to: EGPEAAWKCTRSAEEGAAGPGRL*CPGGVP
Trigger: GGGGACCCCTCCTGGGCAGCAGAGCCTTCCCGGGCC...TGCAGCCCCCTCCTCTGCAGATCTAGTGCATTTCCATGCTGCCTCTGGGCCTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR GCA 90 bp CCTGGCCACAAGCAGGCCCAGTGCACACCTGCAGCCCACACAAGACCCACCCAGAGCCCGGCTGGCTCCTaGACACAGCCCCTTCAGAAG +
Preference number: 4 (lower is better)
Translates to: PGHKQAQCTPAAHTRPTQSPAGS*TQPLQK
Trigger: CTTCTGAAGGGGCTGTGTGCAGGAGCCAGCCGGGCT...CTGGGTGGGTCTTGTGTGGGCTGCAGGTGTGCACTGGGCCTGCTTGTGGCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR GCA 90 bp CTGCAGAGGAGGGGGCTGCACCCGGCTGGAAACGGGGCACAGACCATGCAGGGAACAGCCACACAGACGTaGCTGATGCTGCCCCCAGAG +
Preference number: 4 (lower is better)
Translates to: LQRRGLHPAGNGAQTMQGTATQT*LMLPPE
Trigger: CTCTGGGGGCAGCATCAGGCACGTCTGTGTGGCTGT...TCCCTGCATGGTCTGTGCCCCGTTTCCAGCCGGGTGCAGCCCCCTCCTCTGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR CCA 90 bp GAAGGCCCAGAGGCAGCATGGAAATGCACTAGATCTGCAGAGGAGGGGGCTGCACCACGCCCACCTGGCTaGCCTGCCGCACCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: EGPEAAWKCTRSAEEGAAPRPPG*PAAPGP
Trigger: TGGCCCAGGTGCGGCAGGCCAGCCAGGTGGGCGTGG...TGCAGCCCCCTCCTCTGCAGATCTAGTGCATTTCCATGCTGCCTCTGGGCCTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR CCA 90 bp CCAGAGAGCCAGGAGGGCAACGCTGATCTCAGGGACCACAAGGGAGATACCAGGGTGGGCGCTTGCCGGTaGGTGGCCTCGCAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: PESQEGNADLRDHKGDTRVGACR*VASQLQ
Trigger: CTGGAGCTGCGAGGCCACCCACCGGCAAGCGCCCAC...CCTGGTATCTCCCTTGTGGTCCCTGAGATCAGCGTTGCCCTCCTGGCTCTCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR CCA 90 bp AGAGCCAGGAGGGCAACGCTGATCTCAGGGACCACAAGGGAGATACCAGGACGCGTGGGCGCTTGCCGGTaGGTGGCCTCGCAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: RARRATLISGTTREIPGRVGACR*VASQLQ
Trigger: CTGGAGCTGCGAGGCCACCCACCGGCAAGCGCCCAC...GCGTCCTGGTATCTCCCTTGTGGTCCCTGAGATCAGCGTTGCCCTCCTGGCTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR CCA 90 bp ATCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGAGGACACGGAACAAGATGAGCATGACCTaGTCCTCACCAGGGGCACCG +
Preference number: 4 (lower is better)
Translates to: ICIRRRRGLPASCRRTRNKMSMT*SSPGAP
Trigger: CGGTGCCCCTGGTGAGGACCAGGTCATGCTCATCTT...GTTCCGTGTCCTCCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443147.5
CDS-3UTR CCA 90 bp GGGGCACCGTGGACGAATAGGTACGGCTGGGTCAGTGGGCGGGCCCTTGACACTGGTCGGGCAGGACGGTaGGCAGGTGTAGCTGTGACA +
Preference number: 4 (lower is better)
Translates to: GAPWTNRYGWVSGRALDTGRAGR*AGVAVT
Trigger: TGTCACAGCTACACCTGCCCACCGTCCTGCCCGACC...AGTGTCAAGGGCCCGCCCACTGACCCAGCCGTACCTATTCGTCCACGGTGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000026218.9
ENST00000321878.10
CDS-3UTR CCA 90 bp TGGCCGTGTGGTGGTGCCAGGCGAGCCAGCAGTTCCCTCAGTCCTGCTTGTCCCGGTCGGGCAGGACGGTaGGCAGGTGTAGCTGTGACA +
Preference number: 4 (lower is better)
Translates to: WPCGGARRASSSLSPACPGRAGR*AGVAVT
Trigger: TGTCACAGCTACACCTGCCCACCGTCCTGCCCGACC...GGGACAAGCAGGACTGAGGGAACTGCTGGCTCGCCTGGCACCACCACACGGCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443147.5
CDS-3UTR CCA 90 bp CCAGAGAGCCAGGAGGGCAACGCTGATCTCAGGGACCACAAGGGAGATACCAGGGTGGTGGCTCCAGCCTaGCGGTCGGGCAGGACGGTG +
Preference number: 4 (lower is better)
Translates to: PESQEGNADLRDHKGDTRVVAPA*RSGRTV
Trigger: CACCGTCCTGCCCGACCGCCAGGCTGGAGCCACCAC...CCTGGTATCTCCCTTGTGGTCCCTGAGATCAGCGTTGCCCTCCTGGCTCTCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR CCA 90 bp AGAGCCAGGAGGGCAACGCTGATCTCAGGGACCACAAGGGAGATACCAGGACGCCCCCCGTGCTGGCAGTaGTGGCTCCAGCCTGGCGGT +
Preference number: 4 (lower is better)
Translates to: RARRATLISGTTREIPGRPPCWQ*WLQPGG
Trigger: ACCGCCAGGCTGGAGCCACCACTGCCAGCACGGGGG...GCGTCCTGGTATCTCCCTTGTGGTCCCTGAGATCAGCGTTGCCCTCCTGGCTCT
66% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR CCA 90 bp AGAGCCAGGAGGGCAACGCTGATCTCAGGGACCACAAGGGAGATACCAGGACGCGTCCCGAGGCTCGCCTaGCCAGCTCCGCGAGGATGC +
Preference number: 4 (lower is better)
Translates to: RARRATLISGTTREIPGRVPRLA*PAPRGC
Trigger: GCATCCTCGCGGAGCTGGCCAGGCGAGCCTCGGGAC...GCGTCCTGGTATCTCCCTTGTGGTCCCTGAGATCAGCGTTGCCCTCCTGGCTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR CCA 90 bp GAAGCGGACTCGGGCTCACAGGGAACACCCGCACCCAGACCGTGCCGTCTGGCACCAGCGACAGCAGGCTaGCCAACAGCAGGCAAATGG +
Preference number: 4 (lower is better)
Translates to: EADSGSQGTPAPRPCRLAPATAG*PTAGKW
Trigger: CCATTTGCCTGCTGTTGGCCAGCCTGCTGTCGCTGG...TGCCAGACGGCACGGTCTGGGTGCGGGTGTTCCCTGTGAGCCCGAGTCCGCTTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000636657.1
CDS-3UTR CCA 90 bp CTGCAGAGGAGGGGGCTGCACCCGGCTGGAAACGGGGCACAGACCATGCAGGGACCAGCGACAGCAGGCTaGCCAACAGCAGGCAAATGG +
Preference number: 4 (lower is better)
Translates to: LQRRGLHPAGNGAQTMQGPATAG*PTAGKW
Trigger: CCATTTGCCTGCTGTTGGCCAGCCTGCTGTCGCTGG...TCCCTGCATGGTCTGTGCCCCGTTTCCAGCCGGGTGCAGCCCCCTCCTCTGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR CCA 90 bp GGTTTATCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGAGGACACCCAGCGACAGCAGGCTaGCCAACAGCAGGCAAATGG +
Preference number: 4 (lower is better)
Translates to: GLSASGGGGACRPRAGGHPATAG*PTAGKW
Trigger: CCATTTGCCTGCTGTTGGCCAGCCTGCTGTCGCTGG...GTGTCCTCCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGATAAACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443147.5
ENST00000636657.1
CDS-3UTR CCA 90 bp GTCCACTCACGTCAGCCACAGGAACGAGGGCGTCGGCCAGATGCCCGATGCGGCCCAGCGACAGCAGGCTaGCCAACAGCAGGCAAATGG +
Preference number: 4 (lower is better)
Translates to: VHSRQPQERGRRPDARCGPATAG*PTAGKW
Trigger: CCATTTGCCTGCTGTTGGCCAGCCTGCTGTCGCTGG...GCCGCATCGGGCATCTGGCCGACGCCCTCGTTCCTGTGGCTGACGTGAGTGGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470411.2
CDS-3UTR CCA 90 bp GGCAGTCCTGGTGCTGCTGAGATGGGCGCTGCCTCCTCCCACCCACAGCGCGTCGGAGCTGTTCGCACGTaGAGAGTTTGCTCCCGAGGA +
Preference number: 4 (lower is better)
Translates to: GSPGAAEMGAASSHPQRVGAVRT*RVCSRG
Trigger: TCCTCGGGAGCAAACTCTCCACGTGCGAACAGCTCC...GACGCGCTGTGGGTGGGAGGAGGCAGCGCCCATCTCAGCAGCACCAGGACTGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp ATCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGAGGACACGGAACGGAGCTGTTCGCACGTaGAGAGTTTGCTCCCGAGGA +
Preference number: 4 (lower is better)
Translates to: ICIRRRRGLPASCRRTRNGAVRT*RVCSRG
Trigger: TCCTCGGGAGCAAACTCTCCACGTGCGAACAGCTCC...GTTCCGTGTCCTCCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443147.5
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
ENST00000637468.1
CDS-3UTR CCA 90 bp GAAGCGGACTCGGGCTCACAGGGAACACCCGCACCCAGACCGTGCCGTCTGGCAGCCTTCCTCATCAGCTaGGCAGGGTTCTCCGCCTTC +
Preference number: 4 (lower is better)
Translates to: EADSGSQGTPAPRPCRLAAFLIS*AGFSAF
Trigger: GAAGGCGGAGAACCCTGCCCAGCTGATGAGGAAGGC...TGCCAGACGGCACGGTCTGGGTGCGGGTGTTCCCTGTGAGCCCGAGTCCGCTTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp GAGCAGATGGCTGGCTGTGGCCGTGTGGTGGTGCCAGGCGAGCCAGCAGTTCCCCAGAGGCCACCGTGTTaGCCTTCCTCATCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: EQMAGCGRVVVPGEPAVPQRPPC*PSSSAG
Trigger: CCCAGCTGATGAGGAAGGCCAACACGGTGGCCTCTG...GGGAACTGCTGGCTCGCCTGGCACCACCACACGGCCACAGCCAGCCATCTGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321878.10
ENST00000443147.5
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR CCA 90 bp GAAGCGGACTCGGGCTCACAGGGAACACCCGCACCCAGACCGTGCCGTCTGGCAATGCGGCTTCTCCCGTaGAGCCAGGACAGCAGCATG +
Preference number: 4 (lower is better)
Translates to: EADSGSQGTPAPRPCRLAMRLLP*SQDSSM
Trigger: CATGCTGCTGTCCTGGCTCCACGGGAGAAGCCGCAT...TGCCAGACGGCACGGTCTGGGTGCGGGTGTTCCCTGTGAGCCCGAGTCCGCTTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp CTGCAGAGGAGGGGGCTGCACCCGGCTGGAAACGGGGCACAGACCATGCAGGGAATGCGGCTTCTCCCGTaGAGCCAGGACAGCAGCATG +
Preference number: 4 (lower is better)
Translates to: LQRRGLHPAGNGAQTMQGMRLLP*SQDSSM
Trigger: CATGCTGCTGTCCTGGCTCCACGGGAGAAGCCGCAT...TCCCTGCATGGTCTGTGCCCCGTTTCCAGCCGGGTGCAGCCCCCTCCTCTGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR CCA 90 bp TTTATCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGAGGACACGGATGCGGCTTCTCCCGTaGAGCCAGGACAGCAGCATG +
Preference number: 4 (lower is better)
Translates to: FICIRRRRGLPASCRRTRMRLLP*SQDSSM
Trigger: CATGCTGCTGTCCTGGCTCCACGGGAGAAGCCGCAT...CCGTGTCCTCCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGATAAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443147.5
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
ENST00000637468.1
CDS-3UTR CCA 90 bp GCAGCAGGTGGGAAGCGGGTCCCAAGGCAGGCAGTGCCAGTGATGGAGTGCGGCATGCGGCTTCTCCCGTaGAGCCAGGACAGCAGCATG +
Preference number: 4 (lower is better)
Translates to: AAGGKRVPRQAVPVMECGMRLLP*SQDSSM
Trigger: CATGCTGCTGTCCTGGCTCCACGGGAGAAGCCGCAT...GCCGCACTCCATCACTGGCACTGCCTGCCTTGGGACCCGCTTCCCACCTGCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321878.10
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR CCA 90 bp CTCACAGGGAACACCCGCACCCAGACCGTGCCGTCTGGCAGGCACTTTCGGCCTAGCTCCTCGGCCACGTaGTCAGCCACAGGAACGAGG +
Preference number: 4 (lower is better)
Translates to: LTGNTRTQTVPSGRHFRPSSSAT*SATGTR
Trigger: CCTCGTTCCTGTGGCTGACCACGTGGCCGAGGAGCT...AGGCCGAAAGTGCCTGCCAGACGGCACGGTCTGGGTGCGGGTGTTCCCTGTGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp GGACCTGCTGCTACGGGGCACCGTGGACGAATAGGTACGGCTGGGTCAGTGGGCAGCTCCTCGGCCACGTaGTCAGCCACAGGAACGAGG +
Preference number: 4 (lower is better)
Translates to: GPAATGHRGRIGTAGSVGSSSAT*SATGTR
Trigger: CCTCGTTCCTGTGGCTGACCACGTGGCCGAGGAGCT...GCCCACTGACCCAGCCGTACCTATTCGTCCACGGTGCCCCGTAGCAGCAGGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp GGTGGTGCCAGGCGAGCCAGCAGTTCCCTCAGTCCTGCTTGTCCCCTCTCTGCCAGCTCCTCGGCCACGTaGTCAGCCACAGGAACGAGG +
Preference number: 4 (lower is better)
Translates to: GGARRASSSLSPACPLSASSSAT*SATGTR
Trigger: CCTCGTTCCTGTGGCTGACCACGTGGCCGAGGAGCT...GGCAGAGAGGGGACAAGCAGGACTGAGGGAACTGCTGGCTCGCCTGGCACCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000443147.5
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR CCA 90 bp GCACCTGCAGGCTCCCCTCCTGAAGCGGACTCGGGCTCACAGGGAACACCCGCAAAGCGGCCCAGCACCTaGTCCAGTGCACGGTTCATC +
Preference number: 4 (lower is better)
Translates to: APAGSPPEADSGSQGTPAKRPST*SSARFI
Trigger: GATGAACCGTGCACTGGACCAGGTGCTGGGCCGCTT...TGCGGGTGTTCCCTGTGAGCCCGAGTCCGCTTCAGGAGGGGAGCCTGCAGGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp CAGTGTCCTCAGGCCCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGAGTGAGGACAGGCCATaGATCTTCAGGCAGTACAGC +
Preference number: 4 (lower is better)
Translates to: QCPQALHQEAEGPAGLVPSEDRP*IFRQYS
Trigger: GCTGTACTGCCTGAAGATCCATGGCCTGTCCTCACT...CGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGGGCCTGAGGACACTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420990.6
CDS-3UTR CCA 90 bp TGGGTTTATCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGAGGACCAGGAGTCCACGCGCTaGCGCAGAACGTTCCACTTC +
Preference number: 4 (lower is better)
Translates to: WVYLHQEAEGPAGLVPEDQESTR*RRTFHF
Trigger: GAAGTGGAACGTTCTGCGCCAGCGCGTGGACTCCTG...GTCCTCCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGATAAACCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000443147.5
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
ENST00000637468.1
CDS-3UTR CCA 90 bp GAGCAGATGGCTGGCTGTGGCCGTGTGGTGGTGCCAGGCGAGCCAGCAGTTCCCCAGGAGTCCACGCGCTaGCGCAGAACGTTCCACTTC +
Preference number: 4 (lower is better)
Translates to: EQMAGCGRVVVPGEPAVPQESTR*RRTFHF
Trigger: GAAGTGGAACGTTCTGCGCCAGCGCGTGGACTCCTG...GGGAACTGCTGGCTCGCCTGGCACCACCACACGGCCACAGCCAGCCATCTGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000321878.10
ENST00000443147.5
ENST00000540241.1
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR CCA 90 bp AGCCCAAGGTGTGATAGCAGGGCCTGCCGTGTTCAGGAGCACACAGCAGCGTCCCGCCCCAGGAGTGCTTaGGGTGGCAGCCACAGCTGG +
Preference number: 4 (lower is better)
Translates to: SPRCDSRACRVQEHTAASRPRSA*GGSHSW
Trigger: CCAGCTGTGGCTGCCACCCCAAGCACTCCTGGGGCG...GGACGCTGCTGTGTGCTCCTGAACACGGCAGGCCCTGCTATCACACCTTGGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000321878.10
ENST00000540241.1
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR CCA 90 bp ACACAGCAGCGTCCACAAAGCACAGGACATGCGCCAGCTGAGCTGGTGCCACCCCGCCCCAGGAGTGCTTaGGGTGGCAGCCACAGCTGG +
Preference number: 4 (lower is better)
Translates to: TQQRPQSTGHAPAELVPPRPRSA*GGSHSW
Trigger: CCAGCTGTGGCTGCCACCCCAAGCACTCCTGGGGCG...GGGTGGCACCAGCTCAGCTGGCGCATGTCCTGTGCTTTGTGGACGCTGCTGTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000321878.10
ENST00000540241.1
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR CCA 90 bp CCAAGCCCAAGGTGTGATAGCAGGGCCTGCCGTGTTCAGGAGCACACAGCAGCGGCTGTGGCCGTGTGGTaGTGCCAGGCGAGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: PSPRCDSRACRVQEHTAAAVAVW*CQASQQ
Trigger: CTGCTGGCTCGCCTGGCACCACCACACGGCCACAGC...CGCTGCTGTGTGCTCCTGAACACGGCAGGCCCTGCTATCACACCTTGGGCTTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000321878.10
ENST00000540241.1
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR CCA 90 bp AGCCCAAGGTGTGATAGCAGGGCCTGCCGTGTTCAGGAGCACACAGCAGCGTCCCTGGCTGTGGCCGTGTaGTGGTGCCAGGCGAGCCAG +
Preference number: 4 (lower is better)
Translates to: SPRCDSRACRVQEHTAASLAVAV*WCQASQ
Trigger: CTGGCTCGCCTGGCACCACCACACGGCCACAGCCAG...GGACGCTGCTGTGTGCTCCTGAACACGGCAGGCCCTGCTATCACACCTTGGGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000321878.10
ENST00000540241.1
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR CCA 90 bp GGGGCACCGTGGACGAATAGGTACGGCTGGGTCAGTGGGCGGGCCCTTGACACTGAGCTGGTGCCACCCTaGCAGAGCAGATGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: GAPWTNRYGWVSGRALDTELVPP*QSRWLA
Trigger: AGCCAGCCATCTGCTCTGCCAGGGTGGCACCAGCTC...AGTGTCAAGGGCCCGCCCACTGACCCAGCCGTACCTATTCGTCCACGGTGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp TGGGGAGGCGGTAGGTGTGCACCACGCGGCTGTAGGGCAGTGGGTTTATCTGCATGCGGCCAGCCTGGCTaGCCACCCCCACATCTGCTC +
Preference number: 4 (lower is better)
Translates to: WGGGRCAPRGCRAVGLSACGQPG*PPPHLL
Trigger: GAGCAGATGTGGGGGTGGCCAGCCAGGCTGGCCGCA...TGCAGATAAACCCACTGCCCTACAGCCGCGTGGTGCACACCTACCGCCTCCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR CCA 90 bp ATGGAGTGCGGCCAGCCTGGCTGGCCACCCCCACATCTGCTCACTCCCAATGACGGTGACCGCAGCAGGTaGGAAGCGGGTCCCAAGGCA +
Preference number: 4 (lower is better)
Translates to: MECGQPGWPPPHLLTPNDGDRSR*EAGPKA
Trigger: TGCCTTGGGACCCGCTTCCCACCTGCTGCGGTCACC...GTCATTGGGAGTGAGCAGATGTGGGGGTGGCCAGCCAGGCTGGCCGCACTCCAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000321878.10
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR CCA 90 bp ACGAGCAGATGGATCAGGCCCTGCACGGCGACCACCAGGAGCCGGAGCAGGGTGAGTGCTCTGGACACCTaGGGTTGCTGTGCTCGCCAC +
Preference number: 4 (lower is better)
Translates to: TSRWIRPCTATTRSRSRVSALDT*GCCARH
Trigger: GTGGCGAGCACAGCAACCCCAGGTGTCCAGAGCACT...CACCCTGCTCCGGCTCCTGGTGGTCGCCGTGCAGGGCCTGATCCATCTGCTCGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp GAAGCGGGTCCCAAGGCAGGCAGTGCCAGTGATGGAGTGCGGCCAGCCTGGCTGTACACAGGGTGGGCATaGGGCAGTGCTCTGGACACC +
Preference number: 4 (lower is better)
Translates to: EAGPKAGSASDGVRPAWLYTGWA*GSALDT
Trigger: GGTGTCCAGAGCACTGCCCCATGCCCACCCTGTGTA...CAGCCAGGCTGGCCGCACTCCATCACTGGCACTGCCTGCCTTGGGACCCGCTTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321878.10
ENST00000635205.1
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp GAACACCCGCACCCAGACCGTGCCGTCTGGCAGGCACTTTCGGCCTCAGTGCCACCTGGGTACACAGGGTaGGCATGGGGCAGTGCTCTG +
Preference number: 4 (lower is better)
Translates to: EHPHPDRAVWQALSASVPPGYTG*AWGSAL
Trigger: CAGAGCACTGCCCCATGCCCACCCTGTGTACCCAGG...TGGCACTGAGGCCGAAAGTGCCTGCCAGACGGCACGGTCTGGGTGCGGGTGTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp GCACCTGCAGGCTCCCCTCCTGAAGCGGACTCGGGCTCACAGGGAACACCCGCAACGAATAGGTACGGCTaGGTCAGTGGGCGGGCCCTT +
Preference number: 4 (lower is better)
Translates to: APAGSPPEADSGSQGTPATNRYG*VSGRAL
Trigger: AAGGGCCCGCCCACTGACCCAGCCGTACCTATTCGT...TGCGGGTGTTCCCTGTGAGCCCGAGTCCGCTTCAGGAGGGGAGCCTGCAGGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp GGGTTTATCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGAGGACAACGAATAGGTACGGCTaGGTCAGTGGGCGGGCCCTT +
Preference number: 4 (lower is better)
Translates to: GFICIRRRRGLPASCRRTTNRYG*VSGRAL
Trigger: AAGGGCCCGCCCACTGACCCAGCCGTACCTATTCGT...TGTCCTCCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGATAAACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp GCACCTGCAGGCTCCCCTCCTGAAGCGGACTCGGGCTCACAGGGAACACCCGCATGCTACGGGGCACCGTaGACGAATAGGTACGGCTGG +
Preference number: 4 (lower is better)
Translates to: APAGSPPEADSGSQGTPACYGAP*TNRYGW
Trigger: CCAGCCGTACCTATTCGTCCACGGTGCCCCGTAGCA...TGCGGGTGTTCCCTGTGAGCCCGAGTCCGCTTCAGGAGGGGAGCCTGCAGGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp GACCGTGCCGTCTGGCAGGCACTTTCGGCCTCAGTGCCACGGCCCCCTCCCCAGGAAGGGAGACAGATTTaGCCGCAGGACCTGCTGCTA +
Preference number: 4 (lower is better)
Translates to: DRAVWQALSASVPRPPPQEGRQI*PQDLLL
Trigger: TAGCAGCAGGTCCTGCGGCCAAATCTGTCTCCCTTC...CTGGGGAGGGGGCCGTGGCACTGAGGCCGAAAGTGCCTGCCAGACGGCACGGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp GAAGCGGACTCGGGCTCACAGGGAACACCCGCACCCAGACCGTGCCGTCTGGCAGGCTTCCTCCTTCCCTaGGAGGCCCATGAAGGGAGA +
Preference number: 4 (lower is better)
Translates to: EADSGSQGTPAPRPCRLAGFLLP*EAHEGR
Trigger: TCTCCCTTCATGGGCCTCCCAGGGAAGGAGGAAGCC...TGCCAGACGGCACGGTCTGGGTGCGGGTGTTCCCTGTGAGCCCGAGTCCGCTTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp GGCAGTGCTCTGGACACCTGGGGTTGCTGTGCTCGCCACCATGGTGACCGCAGCCCAGACCGTGCCGTCTaGCAGGCACTTTCGGCCTCA +
Preference number: 4 (lower is better)
Translates to: GSALDTWGCCARHHGDRSPDRAV*QALSAS
Trigger: TGAGGCCGAAAGTGCCTGCCAGACGGCACGGTCTGG...GCTGCGGTCACCATGGTGGCGAGCACAGCAACCCCAGGTGTCCAGAGCACTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp GTGCACCACGCGGCTGTAGGGCAGTGGGTTTATCTGCATCAGGAGGCGGAGGGGCACGCCAGTGGATGGTaGCCGCCCTGCTGGCTCCTA +
Preference number: 4 (lower is better)
Translates to: VHHAAVGQWVYLHQEAEGHASGW*PPCWLL
Trigger: TAGGAGCCAGCAGGGCGGCCACCATCCACTGGCGTG...CCCCTCCGCCTCCTGATGCAGATAAACCCACTGCCCTACAGCCGCGTGGTGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443147.5
CDS-3UTR CCA 90 bp TGGCTGTGGCCGTGTGGTGGTGCCAGGCGAGCCAGCAGTTCCCTCAGTCCTGCTGGAACTTCACGCCAGTaGATGGTGGCCGCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: WLWPCGGARRASSSLSPAGTSRQ*MVAALL
Trigger: CAGCAGGGCGGCCACCATCCACTGGCGTGAAGTTCC...AGCAGGACTGAGGGAACTGCTGGCTCGCCTGGCACCACCACACGGCCACAGCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443147.5
CDS-3UTR CCA 90 bp CTCCAGAGCATGGAGAAGGTAGAACTGGCTTTGTGGGGCGGTGGCTCTGGCCCGGGCTTTGTGGGGCGGTaGCTCTGGCCCGGGAAGGCT +
Preference number: 4 (lower is better)
Translates to: LQSMEKVELALWGGGSGPGFVGR*LWPGKA
Trigger: AGCCTTCCCGGGCCAGAGCCACCGCCCCACAAAGCC...CGGGCCAGAGCCACCGCCCCACAAAGCCAGTTCTACCTTCTCCATGCTCTGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470411.2
CDS-3UTR CCA 90 bp CCTGGCCACAAGCAGGCCCAGTGCACACCTGCAGCCCACACAAGACCCACCCAGGTAGAACTGGCTTTGTaGGGCGGTGGCTCTGGCCCG +
Preference number: 4 (lower is better)
Translates to: PGHKQAQCTPAAHTRPTQVELAL*GGGSGP
Trigger: CGGGCCAGAGCCACCGCCCCACAAAGCCAGTTCTAC...CTGGGTGGGTCTTGTGTGGGCTGCAGGTGTGCACTGGGCCTGCTTGTGGCCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR CCA 90 bp CCTGGCCACAAGCAGGCCCAGTGCACACCTGCAGCCCACACAAGACCCACCCAGAGGCCCCAGCGCCCCTaGAGTTCCTGCTTCTGGTTC +
Preference number: 4 (lower is better)
Translates to: PGHKQAQCTPAAHTRPTQRPQRP*SSCFWF
Trigger: GAACCAGAAGCAGGAACTCCAGGGGCGCTGGGGCCT...CTGGGTGGGTCTTGTGTGGGCTGCAGGTGTGCACTGGGCCTGCTTGTGGCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR CCA 90 bp GGCCTGGCCACAAGCAGGCCCAGTGCACACCTGCAGCCCACACAAGACCCACCCCAGCTGGGCTGCACATaGGCCTCCCTGGACAGGAAA +
Preference number: 4 (lower is better)
Translates to: GLATSRPSAHLQPTQDPPQLGCT*ASLDRK
Trigger: TTTCCTGTCCAGGGAGGCCCATGTGCAGCCCAGCTG...GGGTGGGTCTTGTGTGGGCTGCAGGTGTGCACTGGGCCTGCTTGTGGCCAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR CCA 90 bp CTGGCCACAAGCAGGCCCAGTGCACACCTGCAGCCCACACAAGACCCACCCAGTGCAGGAAGTCCCAGCTaGGCTGCACATGGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: LATSRPSAHLQPTQDPPSAGSPS*AAHGPP
Trigger: GGGAGGCCCATGTGCAGCCCAGCTGGGACTTCCTGC...ACTGGGTGGGTCTTGTGTGGGCTGCAGGTGTGCACTGGGCCTGCTTGTGGCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR CCA 90 bp GGTCTAGGACAAAGTAGGCCGGTGGCAGGTGCGGACGACCACAGGCAAAGCTGCCCCAGAGGCCTGGCCTaGCCACAAGCAGGCCCAGTG +
Preference number: 4 (lower is better)
Translates to: GLGQSRPVAGADDHRQSCPRGLA*PQAGPV
Trigger: CACTGGGCCTGCTTGTGGCCAGGCCAGGCCTCTGGG...GCAGCTTTGCCTGTGGTCGTCCGCACCTGCCACCGGCCTACTTTGTCCTAGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR CCA 90 bp CCAGAGAGCCAGGAGGGCAACGCTGATCTCAGGGACCACAAGGGAGATACCAGGAGGAGGAGGCCTGCCTaGCCGGAGGGGTCAGCGTGG +
Preference number: 4 (lower is better)
Translates to: PESQEGNADLRDHKGDTRRRRPA*PEGSAW
Trigger: CCACGCTGACCCCTCCGGCCAGGCAGGCCTCCTCCT...CCTGGTATCTCCCTTGTGGTCCCTGAGATCAGCGTTGCCCTCCTGGCTCTCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470411.2
CDS-3UTR CCA 90 bp CACCCGGGACACCGGGCTCCACCCCAGTCCACTCACGTCAGCCACAGGAACGAGCAGAGGCCACCGTGTTaGCCTTCCTGGAAGGGAGGT +
Preference number: 4 (lower is better)
Translates to: HPGHRAPPQSTHVSHRNEQRPPC*PSWKGG
Trigger: ACCTCCCTTCCAGGAAGGCCAACACGGTGGCCTCTG...CTCGTTCCTGTGGCTGACGTGAGTGGACTGGGGTGGAGCCCGGTGTCCCGGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470411.2
CDS-3UTR CCA 90 bp GGCCTCGTGCCGGAGGACACGGAACTTCACGCCAGCCGCCAGCCTGTAGGGCCGTCAGGCAGTACAGCCTaGTCCAGTGCACGGTTCATC +
Preference number: 4 (lower is better)
Translates to: GLVPEDTELHASRQPVGPSGSTA*SSARFI
Trigger: GATGAACCGTGCACTGGACCAGGCTGTACTGCCTGA...CGGCCCTACAGGCTGGCGGCTGGCGTGAAGTTCCGTGTCCTCCGGCACGAGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637468.1
CDS-3UTR TCA 90 bp CATGGGGCAGTGCTCTGGACACCTGGGGTTGCTGTGCTCGCCACCATGGTGACCGCAGGCACTGACAGCTaGGACCAGCGACAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: HGAVLWTPGVAVLATMVTAGTDS*DQRQQA
Trigger: AGCCTGCTGTCGCTGGTCTCAGCTGTCAGTGCCTGC...GGTCACCATGGTGGCGAGCACAGCAACCCCAGGTGTCCAGAGCACTGCCCCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321878.10
ENST00000636657.1
CDS-3UTR TCA 90 bp TCCACAGAGGCCCGAGGGTGGGCCAAAGAGTCAGGTACCACCCCCAGCAGGAAGGCAGGCACTGACAGCTaGGACCAGCGACAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: STEARGWAKESGTTPSRKAGTDS*DQRQQA
Trigger: AGCCTGCTGTCGCTGGTCTCAGCTGTCAGTGCCTGC...CTTCCTGCTGGGGGTGGTACCTGACTCTTTGGCCCACCCTCGGGCCTCTGTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR TCA 90 bp GTAGAGGAAGAAGCGGCCCAGCACCTGGTCCAGTGCACGGTTCATCTTGAGCCCGCCAGGACAGCAGCATaGGGCCCAGGGCCACGTCCA +
Preference number: 4 (lower is better)
Translates to: VEEEAAQHLVQCTVHLEPARTAA*GPGPRP
Trigger: TGGACGTGGCCCTGGGCCTCATGCTGCTGTCCTGGC...GGGCTCAAGATGAACCGTGCACTGGACCAGGTGCTGGGCCGCTTCTTCCTCTAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000635909.1
ENST00000636657.1
ENST00000638143.1
CDS-3UTR TCA 90 bp TGTGGTGGTGCCAGGCGAGCCAGCAGTTCCCTCAGTCCTGCTTGTCCCCTCTCTGTGCACGGTTCATCTTaGGCCCGGCGGGAGCACCCA +
Preference number: 4 (lower is better)
Translates to: CGGARRASSSLSPACPLSVHGSS*ARREHP
Trigger: TGGGTGCTCCCGCCGGGCTCAAGATGAACCGTGCAC...AGAGAGGGGACAAGCAGGACTGAGGGAACTGCTGGCTCGCCTGGCACCACCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000443147.5
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR TCA 90 bp CTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGAGGACACGGAACTTAGAGCAGAGTCCCGATaGACAGCTGGTCCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: LHQEAEGPAGLVPEDTELRAESR*TAGPGH
Trigger: ATGACCTGGACCAGCTGTTCATCGGGACTCTGCTCT...AAGTTCCGTGTCCTCCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR TCA 90 bp AGTCCTGGTGCTGCTGAGATGGGCGCTGCCTCCTCCCACCCACAGCGCGTCATCGAGCCGAAGACCCAGTaGGTACAGCGGCAGGGAGTT +
Preference number: 4 (lower is better)
Translates to: SPGAAEMGAASSHPQRVIEPKTQ*VQRQGV
Trigger: AACTCCCTGCCGCTGTACTCACTGGGTCTTCGGCTC...GATGACGCGCTGTGGGTGGGAGGAGGCAGCGCCCATCTCAGCAGCACCAGGACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR TCA 90 bp GCTGTGGCCGTGTGGTGGTGCCAGGCGAGCCAGCAGTTCCCTCAGTCCTGCTTGGCCTCCAGGGGTAGATaGGCTCCCCAAGGAACAGCT +
Preference number: 4 (lower is better)
Translates to: AVAVWWCQASQQFPQSCLASRGR*APQGTA
Trigger: AGCTGTTCCTTGGGGAGCTCATCTACCCCTGGAGGC...CAAGCAGGACTGAGGGAACTGCTGGCTCGCCTGGCACCACCACACGGCCACAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000443147.5
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR TCA 90 bp TGGACGAATAGGTACGGCTGGGTCAGTGGGCGGGCCCTTGACACTGAGGCTGCTTGCTCGCCACCATGGTaGCCGCAGCAGGTGGGAAGC +
Preference number: 4 (lower is better)
Translates to: WTNRYGWVSGRALDTEAACSPPW*PQQVGS
Trigger: GCTTCCCACCTGCTGCGGTCACCATGGTGGCGAGCA...AGCAGCCTCAGTGTCAAGGGCCCGCCCACTGACCCAGCCGTACCTATTCGTCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp TCAGCGACTGCTTCAATCCCCCAGATGCAGGGTGCTGTTCGGCTGAGGGAGCTAACCACGGCGCTGCTCTaGTCCGGCACCCACCGTCCC +
Preference number: 4 (lower is better)
Translates to: SATASIPQMQGAVRLRELTTALL*SGTHRP
Trigger: GGGACGGTGGGTGCCGGAGCAGAGCAGCGCCGTGGT...TAGCTCCCTCAGCCGAACAGCACCCTGCATCTGGGGGATTGAAGCAGTCGCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321878.10
ENST00000636657.1
CDS-3UTR GCA 90 bp GAAGGCCCAGAGGCAGCATGGAAATGCACTAGATCTGCAGAGGAGGGGGCTGCAACCACGGCGCTGCTCTaGTCCGGCACCCACCGTCCC +
Preference number: 4 (lower is better)
Translates to: EGPEAAWKCTRSAEEGAATTALL*SGTHRP
Trigger: GGGACGGTGGGTGCCGGAGCAGAGCAGCGCCGTGGT...TGCAGCCCCCTCCTCTGCAGATCTAGTGCATTTCCATGCTGCCTCTGGGCCTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR GCA 90 bp GCCGTGTGGTGGTGCCAGGCGAGCCAGCAGTTCCCTCAGTCCTGCTTGTCCCCTGGGATGAAGGGAAAGTaGAGGACCGCCAGGACCACG +
Preference number: 4 (lower is better)
Translates to: AVWWCQASQQFPQSCLSPGMKGK*RTARTT
Trigger: CGTGGTCCTGGCGGTCCTGCACTTTCCCTTCATCCC...AGGGGACAAGCAGGACTGAGGGAACTGCTGGCTCGCCTGGCACCACCACACGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443147.5
ENST00000636657.1
CDS-3UTR GCA 90 bp GAACACCCGCACCCAGACCGTGCCGTCTGGCAGGCACTTTCGGCCTCAGTGCCAACCTGGGCCAGGAGCTaGTTGACCTGGATGGGGATG +
Preference number: 4 (lower is better)
Translates to: EHPHPDRAVWQALSASVPTWARS*LTWMGM
Trigger: CATCCCCATCCAGGTCAAGCAGCTCCTGGCCCAGGT...TGGCACTGAGGCCGAAAGTGCCTGCCAGACGGCACGGTCTGGGTGCGGGTGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000636657.1
CDS-3UTR GCA 90 bp CTCACAGGGAACACCCGCACCCAGACCGTGCCGTCTGGCAGGCACTTTCGGCCTGAGCACCTCACTGCGTaGTACCGTGTCGAAGACGGC +
Preference number: 4 (lower is better)
Translates to: LTGNTRTQTVPSGRHFRPEHLTA*YRVEDG
Trigger: GCCGTCTTCGACACGGTAGCACGCAGTGAGGTGCTC...AGGCCGAAAGTGCCTGCCAGACGGCACGGTCTGGGTGCGGGTGTTCCCTGTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000636657.1
CDS-3UTR GCA 90 bp GGACCTGCTGCTACGGGGCACCGTGGACGAATAGGTACGGCTGGGTCAGTGGGCGAGCACCTCACTGCGTaGTACCGTGTCGAAGACGGC +
Preference number: 4 (lower is better)
Translates to: GPAATGHRGRIGTAGSVGEHLTA*YRVEDG
Trigger: GCCGTCTTCGACACGGTAGCACGCAGTGAGGTGCTC...GCCCACTGACCCAGCCGTACCTATTCGTCCACGGTGCCCCGTAGCAGCAGGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000636657.1
CDS-3UTR GCA 90 bp CCAGAGAGCCAGGAGGGCAACGCTGATCTCAGGGACCACAAGGGAGATACCAGGTCCACGCCCTCCGACTaGCAGTGGCTCAGCCGCACG +
Preference number: 4 (lower is better)
Translates to: PESQEGNADLRDHKGDTRSTPSD*QWLSRT
Trigger: CGTGCGGCTGAGCCACTGGCAGTCGGAGGGCGTGGA...CCTGGTATCTCCCTTGTGGTCCCTGAGATCAGCGTTGCCCTCCTGGCTCTCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR GCA 90 bp GAACACCCGCACCCAGACCGTGCCGTCTGGCAGGCACTTTCGGCCTCAGTGCCACGCACGTGGAGAGTTTaGTCCCGAGGAAGGACAGGG +
Preference number: 4 (lower is better)
Translates to: EHPHPDRAVWQALSASVPRTWRV*SRGRTG
Trigger: CCCTGTCCTTCCTCGGGAGCAAACTCTCCACGTGCG...TGGCACTGAGGCCGAAAGTGCCTGCCAGACGGCACGGTCTGGGTGCGGGTGTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp AGAGCAGATGGCTGGCTGTGGCCGTGTGGTGGTGCCAGGCGAGCCAGCAGTTCCCGCACGTGGAGAGTTTaGTCCCGAGGAAGGACAGGG +
Preference number: 4 (lower is better)
Translates to: RADGWLWPCGGARRASSSRTWRV*SRGRTG
Trigger: CCCTGTCCTTCCTCGGGAGCAAACTCTCCACGTGCG...GGAACTGCTGGCTCGCCTGGCACCACCACACGGCCACAGCCAGCCATCTGCTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321878.10
ENST00000443147.5
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR GCA 90 bp GGTGGTGCCAGGCGAGCCAGCAGTTCCCTCAGTCCTGCTTGTCCCCTCTCTGCCCGCACGTGGAGAGTTTaGTCCCGAGGAAGGACAGGG +
Preference number: 4 (lower is better)
Translates to: GGARRASSSLSPACPLSARTWRV*SRGRTG
Trigger: CCCTGTCCTTCCTCGGGAGCAAACTCTCCACGTGCG...GGCAGAGAGGGGACAAGCAGGACTGAGGGAACTGCTGGCTCGCCTGGCACCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000443147.5
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR GCA 90 bp GCTGTAGGGCAGTGGGTTTATCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCCGCACGTGGAGAGTTTaGTCCCGAGGAAGGACAGGG +
Preference number: 4 (lower is better)
Translates to: AVGQWVYLHQEAEGPAGLRTWRV*SRGRTG
Trigger: CCCTGTCCTTCCTCGGGAGCAAACTCTCCACGTGCG...GAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGATAAACCCACTGCCCTACAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000443147.5
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR GCA 90 bp CTCACAGGGAACACCCGCACCCAGACCGTGCCGTCTGGCAGGCACTTTCGGCCTAAGATTAGCGTGAGGTaGTCCAGCCGGTGCCGGAGC +
Preference number: 4 (lower is better)
Translates to: LTGNTRTQTVPSGRHFRPKISVR*SSRCRS
Trigger: GCTCCGGCACCGGCTGGAGCACCTCACGCTAATCTT...AGGCCGAAAGTGCCTGCCAGACGGCACGGTCTGGGTGCGGGTGTTCCCTGTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp GTGGCCGTGTGGTGGTGCCAGGCGAGCCAGCAGTTCCCTCAGTCCTGCTTGTCCAAGATTAGCGTGAGGTaGTCCAGCCGGTGCCGGAGC +
Preference number: 4 (lower is better)
Translates to: VAVWWCQASQQFPQSCLSKISVR*SSRCRS
Trigger: GCTCCGGCACCGGCTGGAGCACCTCACGCTAATCTT...GGACAAGCAGGACTGAGGGAACTGCTGGCTCGCCTGGCACCACCACACGGCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000443147.5
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR GCA 90 bp GGTGGTGCCAGGCGAGCCAGCAGTTCCCTCAGTCCTGCTTGTCCCCTCTCTGCCAAGATTAGCGTGAGGTaGTCCAGCCGGTGCCGGAGC +
Preference number: 4 (lower is better)
Translates to: GGARRASSSLSPACPLSAKISVR*SSRCRS
Trigger: GCTCCGGCACCGGCTGGAGCACCTCACGCTAATCTT...GGCAGAGAGGGGACAAGCAGGACTGAGGGAACTGCTGGCTCGCCTGGCACCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000443147.5
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR GCA 90 bp CCAGAGAGCCAGGAGGGCAACGCTGATCTCAGGGACCACAAGGGAGATACCAGGCGGCCAGATGCCCGATaGGGCTTCTCCCGTGGAGCC +
Preference number: 4 (lower is better)
Translates to: PESQEGNADLRDHKGDTRRPDAR*GFSRGA
Trigger: GGCTCCACGGGAGAAGCCGCATCGGGCATCTGGCCG...CCTGGTATCTCCCTTGTGGTCCCTGAGATCAGCGTTGCCCTCCTGGCTCTCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR GCA 90 bp GTAGGTGTGCACCACGCGGCTGTAGGGCAGTGGGTTTATCTGCATCAGGAGGCGCGGCCAGATGCCCGATaGGGCTTCTCCCGTGGAGCC +
Preference number: 4 (lower is better)
Translates to: VGVHHAAVGQWVYLHQEARPDAR*GFSRGA
Trigger: GGCTCCACGGGAGAAGCCGCATCGGGCATCTGGCCG...CGCCTCCTGATGCAGATAAACCCACTGCCCTACAGCCGCGTGGTGCACACCTAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000443147.5
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR GCA 90 bp GTAGAGGAAGAAGCGGCCCAGCACCTGGTCCAGTGCACGGTTCATCTTGAGCCCCGGCCAGATGCCCGATaGGGCTTCTCCCGTGGAGCC +
Preference number: 4 (lower is better)
Translates to: VEEEAAQHLVQCTVHLEPRPDAR*GFSRGA
Trigger: GGCTCCACGGGAGAAGCCGCATCGGGCATCTGGCCG...GGGCTCAAGATGAACCGTGCACTGGACCAGGTGCTGGGCCGCTTCTTCCTCTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000635909.1
ENST00000636657.1
ENST00000638143.1
CDS-3UTR GCA 90 bp GCAGTGCTCTGGACACCTGGGGTTGCTGTGCTCGCCACCATGGTGACCGCAGCAAGCCACTGCAGCAGATaGTGGAGCTCCTCGGCCACG +
Preference number: 4 (lower is better)
Translates to: AVLWTPGVAVLATMVTAASHCSR*WSSSAT
Trigger: CGTGGCCGAGGAGCTCCAGCATCTGCTGCAGTGGCT...TGCTGCGGTCACCATGGTGGCGAGCACAGCAACCCCAGGTGTCCAGAGCACTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp TGGTGCCAGGCGAGCCAGCAGTTCCCTCAGTCCTGCTTGTCCCCTCTCTGCCTCAGCCACTGCAGCAGATaGTGGAGCTCCTCGGCCACG +
Preference number: 4 (lower is better)
Translates to: WCQASQQFPQSCLSPLCLSHCSR*WSSSAT
Trigger: CGTGGCCGAGGAGCTCCAGCATCTGCTGCAGTGGCT...GAGGCAGAGAGGGGACAAGCAGGACTGAGGGAACTGCTGGCTCGCCTGGCACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000443147.5
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR GCA 90 bp GGGGCACCGTGGACGAATAGGTACGGCTGGGTCAGTGGGCGGGCCCTTGACACTGCACCCATCAGCCACTaGAGCAGATGCTGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: GAPWTNRYGWVSGRALDTAPISH*SRCWSS
Trigger: GGAGCTCCAGCATCTGCTGCAGTGGCTGATGGGTGC...AGTGTCAAGGGCCCGCCCACTGACCCAGCCGTACCTATTCGTCCACGGTGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp CACCCGCACCCAGACCGTGCCGTCTGGCAGGCACTTTCGGCCTCAGTGCCACGGACGTGCCAAAGGATGTaGTCCACGAAGGGGGACATG +
Preference number: 4 (lower is better)
Translates to: HPHPDRAVWQALSASVPRTCQRM*STKGDM
Trigger: CATGTCCCCCTTCGTGGAGCACATCCTTTGGCACGT...CCGTGGCACTGAGGCCGAAAGTGCCTGCCAGACGGCACGGTCTGGGTGCGGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp GGGCAGTGGGTTTATCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGACGTGCCAAAGGATGTaGTCCACGAAGGGGGACATG +
Preference number: 4 (lower is better)
Translates to: GQWVYLHQEAEGPAGLVPTCQRM*STKGDM
Trigger: CATGTCCCCCTTCGTGGAGCACATCCTTTGGCACGT...CGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGATAAACCCACTGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000443147.5
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR GCA 90 bp AGCACACAGCAGCGTCCACAAAGCACAGGACATGCGCCAGCTGAGCTGGTGCCAAGGGCGCCCCAGGAGTaGTTGGGGTGGCAGCCACAG +
Preference number: 4 (lower is better)
Translates to: STQQRPQSTGHAPAELVPRAPQE*LGWQPQ
Trigger: CTGTGGCTGCCACCCCAAGCACTCCTGGGGCGCCCT...TGGCACCAGCTCAGCTGGCGCATGTCCTGTGCTTTGTGGACGCTGCTGTGTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000321878.10
ENST00000540241.1
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR GCA 90 bp GCCCAAGGTGTGATAGCAGGGCCTGCCGTGTTCAGGAGCACACAGCAGCGTCCAGTGGCCGTGTGGTGGTaGCAGGCGAGCCAGCAGTTC +
Preference number: 4 (lower is better)
Translates to: AQGVIAGPAVFRSTQQRPVAVWW*QASQQF
Trigger: GAACTGCTGGCTCGCCTGGCACCACCACACGGCCAC...TGGACGCTGCTGTGTGCTCCTGAACACGGCAGGCCCTGCTATCACACCTTGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000321878.10
ENST00000540241.1
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR GCA 90 bp CAGGCAGTCCTGGTGCTGCTGAGATGGGCGCTGCCTCCTCCCACCCACAGCGCGTGTGATAGCAGGGCCTaGCGTGTTCAGGAGCACACA +
Preference number: 4 (lower is better)
Translates to: QAVLVLLRWALPPPTHSACDSRA*RVQEHT
Trigger: TGTGTGCTCCTGAACACGGCAGGCCCTGCTATCACA...CGCGCTGTGGGTGGGAGGAGGCAGCGCCCATCTCAGCAGCACCAGGACTGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp TGGCCGTGTGGTGGTGCCAGGCGAGCCAGCAGTTCCCTCAGTCCTGCTTGTCCCGGCCACCCCCACATCTaGTCACTCCCAATGACCTCC +
Preference number: 4 (lower is better)
Translates to: WPCGGARRASSSLSPACPGHPHI*SLPMTS
Trigger: GGAGGTCATTGGGAGTGAGCAGATGTGGGGGTGGCC...GGGACAAGCAGGACTGAGGGAACTGCTGGCTCGCCTGGCACCACCACACGGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR GCA 90 bp AGAGCAGATGGCTGGCTGTGGCCGTGTGGTGGTGCCAGGCGAGCCAGCAGTTCCCTGGACACCTGGGGTTaGTGTGCTCGCCACCATGGT +
Preference number: 4 (lower is better)
Translates to: RADGWLWPCGGARRASSSLDTWG*CARHHG
Trigger: ACCATGGTGGCGAGCACAGCAACCCCAGGTGTCCAG...GGAACTGCTGGCTCGCCTGGCACCACCACACGGCCACAGCCAGCCATCTGCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321878.10
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR GCA 90 bp TGGCCGTGTGGTGGTGCCAGGCGAGCCAGCAGTTCCCTCAGTCCTGCTTGTCCCCTGGACACCTGGGGTTaGTGTGCTCGCCACCATGGT +
Preference number: 4 (lower is better)
Translates to: WPCGGARRASSSLSPACPLDTWG*CARHHG
Trigger: ACCATGGTGGCGAGCACAGCAACCCCAGGTGTCCAG...GGGACAAGCAGGACTGAGGGAACTGCTGGCTCGCCTGGCACCACCACACGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR GCA 90 bp ACTTCACGCCAGCCGCCAGCCTGTAGGGCCGGCAGAGCCGAAGACCCAGTGAGTCTGGACACCTGGGGTTaGTGTGCTCGCCACCATGGT +
Preference number: 4 (lower is better)
Translates to: TSRQPPACRAGRAEDPVSLDTWG*CARHHG
Trigger: ACCATGGTGGCGAGCACAGCAACCCCAGGTGTCCAG...ACTCACTGGGTCTTCGGCTCTGCCGGCCCTACAGGCTGGCGGCTGGCGTGAAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR GCA 90 bp GTCCTGGTGCTGCTGAGATGGGCGCTGCCTCCTCCCACCCACAGCGCGTCATCCACAGCAGCCTGGCGATaGTCACAGCCTGCTGATGGT +
Preference number: 4 (lower is better)
Translates to: VLVLLRWALPPPTHSASSTAAWR*SQPADG
Trigger: ACCATCAGCAGGCTGTGAGCATCGCCAGGCTGCTGT...GGATGACGCGCTGTGGGTGGGAGGAGGCAGCGCCCATCTCAGCAGCACCAGGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp TGGGTTTATCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGAGGACACAGCAGCCTGGCGATaGTCACAGCCTGCTGATGGT +
Preference number: 4 (lower is better)
Translates to: WVYLHQEAEGPAGLVPEDTAAWR*SQPADG
Trigger: ACCATCAGCAGGCTGTGAGCATCGCCAGGCTGCTGT...GTCCTCCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGATAAACCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp AACACCCGCACCCAGACCGTGCCGTCTGGCAGGCACTTTCGGCCTCAGTGCCACGGCCACAGAGGTGTCTaGACAGCAGGGCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: NTRTQTVPSGRHFRPQCHGHRGV*TAGLPP
Trigger: AGGAGGAAGCCCTGCTGTGCAGACACCTCTGTGGCC...GTGGCACTGAGGCCGAAAGTGCCTGCCAGACGGCACGGTCTGGGTGCGGGTGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp TCCACAGAGGCCCGAGGGTGGGCCAAAGAGTCAGGTACCACCCCCAGCAGGAAGAAGTCCCAGCTGGGCTaGACATGGGCCTCCCTGGAC +
Preference number: 4 (lower is better)
Translates to: STEARGWAKESGTTPSRKKSQLG*TWASLD
Trigger: GTCCAGGGAGGCCCATGTGCAGCCCAGCTGGGACTT...CTTCCTGCTGGGGGTGGTACCTGACTCTTTGGCCCACCCTCGGGCCTCTGTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR CCA 90 bp CGCAGAACGTTCCACTTCTTCCCCCGGAACAGACGCCACAGTGAGGACAGGCCAGCGCTTGCCGGTGGGTaGCCTCGCAGCTCCAGAACG +
Preference number: 4 (lower is better)
Translates to: RRTFHFFPRNRRHSEDRPALAGG*PRSSRT
Trigger: CGTTCTGGAGCTGCGAGGCCACCCACCGGCAAGCGC...TGGCCTGTCCTCACTGTGGCGTCTGTTCCGGGGGAAGAAGTGGAACGTTCTGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp GCAGGCTCCCCTCCTGAAGCGGACTCGGGCTCACAGGGAACACCCGCACCCAGAAAGATGAGCATGACCTaGTCCTCACCAGGGGCACCG +
Preference number: 4 (lower is better)
Translates to: AGSPPEADSGSQGTPAPRKMSMT*SSPGAP
Trigger: CGGTGCCCCTGGTGAGGACCAGGTCATGCTCATCTT...TCTGGGTGCGGGTGTTCCCTGTGAGCCCGAGTCCGCTTCAGGAGGGGAGCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000026218.9
ENST00000321878.10
CDS-3UTR CCA 90 bp GAAGGCCCAGAGGCAGCATGGAAATGCACTAGATCTGCAGAGGAGGGGGCTGCAGTGGTGGCTCCAGCCTaGCGGTCGGGCAGGACGGTG +
Preference number: 4 (lower is better)
Translates to: EGPEAAWKCTRSAEEGAAVVAPA*RSGRTV
Trigger: CACCGTCCTGCCCGACCGCCAGGCTGGAGCCACCAC...TGCAGCCCCCTCCTCTGCAGATCTAGTGCATTTCCATGCTGCCTCTGGGCCTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR CCA 90 bp GAAGGCCCAGAGGCAGCATGGAAATGCACTAGATCTGCAGAGGAGGGGGCTGCACCGTGCTGGCAGTGGTaGCTCCAGCCTGGCGGTCGG +
Preference number: 4 (lower is better)
Translates to: EGPEAAWKCTRSAEEGAAPCWQW*LQPGGR
Trigger: CCGACCGCCAGGCTGGAGCCACCACTGCCAGCACGG...TGCAGCCCCCTCCTCTGCAGATCTAGTGCATTTCCATGCTGCCTCTGGGCCTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR CCA 90 bp CACCGTGGACGAATAGGTACGGCTGGGTCAGTGGGCGGGCCCTTGACACTGAGGCCAACAGCAGGCAAATaGGTCCCGAGGCTCGCCTGG +
Preference number: 4 (lower is better)
Translates to: HRGRIGTAGSVGGPLTLRPTAGK*VPRLAW
Trigger: CCAGGCGAGCCTCGGGACCCATTTGCCTGCTGTTGG...CCTCAGTGTCAAGGGCCCGCCCACTGACCCAGCCGTACCTATTCGTCCACGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000636657.1
CDS-3UTR CCA 90 bp AGGGCAGTGGGTTTATCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGAGCTGTTCGCACGTaGAGAGTTTGCTCCCGAGGA +
Preference number: 4 (lower is better)
Translates to: RAVGLSASGGGGACRPRAGAVRT*RVCSRG
Trigger: TCCTCGGGAGCAAACTCTCCACGTGCGAACAGCTCC...GGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGATAAACCCACTGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000443147.5
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR CCA 90 bp AGAGCAGATGGCTGGCTGTGGCCGTGTGGTGGTGCCAGGCGAGCCAGCAGTTCCGCCTTCCTCATCAGCTaGGCAGGGTTCTCCGCCTTC +
Preference number: 4 (lower is better)
Translates to: RADGWLWPCGGARRASSSAFLIS*AGFSAF
Trigger: GAAGGCGGAGAACCCTGCCCAGCTGATGAGGAAGGC...GGAACTGCTGGCTCGCCTGGCACCACCACACGGCCACAGCCAGCCATCTGCTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321878.10
ENST00000443147.5
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR CCA 90 bp CTCACAGGGAACACCCGCACCCAGACCGTGCCGTCTGGCAGGCACTTTCGGCCTCAGAGGCCACCGTGTTaGCCTTCCTCATCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: LTGNTRTQTVPSGRHFRPQRPPC*PSSSAG
Trigger: CCCAGCTGATGAGGAAGGCCAACACGGTGGCCTCTG...AGGCCGAAAGTGCCTGCCAGACGGCACGGTCTGGGTGCGGGTGTTCCCTGTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp CAGGGAACACCCGCACCCAGACCGTGCCGTCTGGCAGGCACTTTCGGCCTCAGTATGCGGCTTCTCCCGTaGAGCCAGGACAGCAGCATG +
Preference number: 4 (lower is better)
Translates to: QGTPAPRPCRLAGTFGLSMRLLP*SQDSSM
Trigger: CATGCTGCTGTCCTGGCTCCACGGGAGAAGCCGCAT...ACTGAGGCCGAAAGTGCCTGCCAGACGGCACGGTCTGGGTGCGGGTGTTCCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp GGTGGTGCCAGGCGAGCCAGCAGTTCCCTCAGTCCTGCTTGTCCCCTCTCTGCCATGCGGCTTCTCCCGTaGAGCCAGGACAGCAGCATG +
Preference number: 4 (lower is better)
Translates to: GGARRASSSLSPACPLSAMRLLP*SQDSSM
Trigger: CATGCTGCTGTCCTGGCTCCACGGGAGAAGCCGCAT...GGCAGAGAGGGGACAAGCAGGACTGAGGGAACTGCTGGCTCGCCTGGCACCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000443147.5
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR CCA 90 bp AGGAAGAAGCGGCCCAGCACCTGGTCCAGTGCACGGTTCATCTTGAGCCCGGCGAGCTCCTCGGCCACGTaGTCAGCCACAGGAACGAGG +
Preference number: 4 (lower is better)
Translates to: RKKRPSTWSSARFILSPASSSAT*SATGTR
Trigger: CCTCGTTCCTGTGGCTGACCACGTGGCCGAGGAGCT...CGCCGGGCTCAAGATGAACCGTGCACTGGACCAGGTGCTGGGCCGCTTCTTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000635909.1
ENST00000636657.1
ENST00000638143.1
CDS-3UTR CCA 90 bp TGGTGCCAGGCGAGCCAGCAGTTCCCTCAGTCCTGCTTGTCCCCTCTCTGCCTCCACTGCAGCAGATGCTaGAGCTCCTCGGCCACGTGG +
Preference number: 4 (lower is better)
Translates to: WCQASQQFPQSCLSPLCLHCSRC*SSSATW
Trigger: CCACGTGGCCGAGGAGCTCCAGCATCTGCTGCAGTG...GAGGCAGAGAGGGGACAAGCAGGACTGAGGGAACTGCTGGCTCGCCTGGCACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000443147.5
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR CCA 90 bp CTCAGGCCCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGAGGACATCAGGCAGTACAGCCTaGCTCCATAGACGTAAAAGC +
Preference number: 4 (lower is better)
Translates to: LRPCIRRRRGLPASCRRTSGSTA*LHRRKS
Trigger: GCTTTTACGTCTATGGAGCCAGGCTGTACTGCCTGA...TGTCCTCCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGGGCCTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420990.6
CDS-3UTR CCA 90 bp GGGCCTGCCGGCCTCGTGCCGGAGGACACGGAACTTCACGCCAGCCGCCAGCCTTCAGGCAGTACAGCCTaGCTCCATAGACGTAAAAGC +
Preference number: 4 (lower is better)
Translates to: GPAGLVPEDTELHASRQPSGSTA*LHRRKS
Trigger: GCTTTTACGTCTATGGAGCCAGGCTGTACTGCCTGA...AGGCTGGCGGCTGGCGTGAAGTTCCGTGTCCTCCGGCACGAGGCCGGCAGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp CGGCCTCGTGCCGGAGGACACGGAACTTCACGCCAGCCGCCAGCCTGTAGGGCCAGTGAGGACAGGCCATaGATCTTCAGGCAGTACAGC +
Preference number: 4 (lower is better)
Translates to: RPRAGGHGTSRQPPACRASEDRP*IFRQYS
Trigger: GCTGTACTGCCTGAAGATCCATGGCCTGTCCTCACT...GGCCCTACAGGCTGGCGGCTGGCGTGAAGTTCCGTGTCCTCCGGCACGAGGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000635909.1
ENST00000636657.1
ENST00000637468.1
CDS-3UTR CCA 90 bp TGTGGCCGTGTGGTGGTGCCAGGCGAGCCAGCAGTTCCCTCAGTCCTGCTTGTCAGGTCCACGAGCAGATaGATCAGGCCCTGCACGGCG +
Preference number: 4 (lower is better)
Translates to: CGRVVVPGEPAVPSVLLVRSTSR*IRPCTA
Trigger: CGCCGTGCAGGGCCTGATCCATCTGCTCGTGGACCT...GACAAGCAGGACTGAGGGAACTGCTGGCTCGCCTGGCACCACCACACGGCCACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000443147.5
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR CCA 90 bp GACCTCCAAGCCCAAGGTGTGATAGCAGGGCCTGCCGTGTTCAGGAGCACACAGGCTGTGGCCGTGTGGTaGTGCCAGGCGAGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: DLQAQGVIAGPAVFRSTQAVAVW*CQASQQ
Trigger: CTGCTGGCTCGCCTGGCACCACCACACGGCCACAGC...CTGTGTGCTCCTGAACACGGCAGGCCCTGCTATCACACCTTGGGCTTGGAGGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000321878.10
ENST00000540241.1
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR CCA 90 bp CCAAGCCCAAGGTGTGATAGCAGGGCCTGCCGTGTTCAGGAGCACACAGCAGCGCCCTGGCAGAGCAGATaGCTGGCTGTGGCCGTGTGG +
Preference number: 4 (lower is better)
Translates to: PSPRCDSRACRVQEHTAAPWQSR*LAVAVW
Trigger: CCACACGGCCACAGCCAGCCATCTGCTCTGCCAGGG...CGCTGCTGTGTGCTCCTGAACACGGCAGGCCCTGCTATCACACCTTGGGCTTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000321878.10
ENST00000540241.1
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR CCA 90 bp GCTGGGGAGGCGGTAGGTGTGCACCACGCGGCTGTAGGGCAGTGGGTTTATCTGGAGCTGGTGCCACCCTaGCAGAGCAGATGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: AGEAVGVHHAAVGQWVYLELVPP*QSRWLA
Trigger: AGCCAGCCATCTGCTCTGCCAGGGTGGCACCAGCTC...CAGATAAACCCACTGCCCTACAGCCGCGTGGTGCACACCTACCGCCTCCCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR CCA 90 bp CTCCAGGGAACATCCGCAAATAAACCCCGTGTGGTTCAGGGAGTGAGGGCCCGGTGCGGCCAGCCTGGCTaGCCACCCCCACATCTGCTC +
Preference number: 4 (lower is better)
Translates to: LQGTSANKPRVVQGVRARCGQPG*PPPHLL
Trigger: GAGCAGATGTGGGGGTGGCCAGCCAGGCTGGCCGCA...CCGGGCCCTCACTCCCTGAACCACACGGGGTTTATTTGCGGATGTTCCCTGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp TCACGCCAGCCGCCAGCCTGTAGGGCCGGCAGAGCCGAAGACCCAGTGAGTACATACACAGGGTGGGCATaGGGCAGTGCTCTGGACACC +
Preference number: 4 (lower is better)
Translates to: SRQPPACRAGRAEDPVSTYTGWA*GSALDT
Trigger: GGTGTCCAGAGCACTGCCCCATGCCCACCCTGTGTA...TGTACTCACTGGGTCTTCGGCTCTGCCGGCCCTACAGGCTGGCGGCTGGCGTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp GGGACGGGGGTCAGCGACTGCTTCAATCCCCCAGATGCAGGGTGCTGTTCGGCTCCTGGGTACACAGGGTaGGCATGGGGCAGTGCTCTG +
Preference number: 4 (lower is better)
Translates to: GTGVSDCFNPPDAGCCSAPGYTG*AWGSAL
Trigger: CAGAGCACTGCCCCATGCCCACCCTGTGTACCCAGG...AGCCGAACAGCACCCTGCATCTGGGGGATTGAAGCAGTCGCTGACCCCCGTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp AGCCCAAGGTGTGATAGCAGGGCCTGCCGTGTTCAGGAGCACACAGCAGCGTCCCTGGGGCTGCTGTGGTaGACGGACCCTCTGGACCTG +
Preference number: 4 (lower is better)
Translates to: SPRCDSRACRVQEHTAASLGLLW*TDPLDL
Trigger: CAGGTCCAGAGGGTCCGTCCACCACAGCAGCCCCAG...GGACGCTGCTGTGTGCTCCTGAACACGGCAGGCCCTGCTATCACACCTTGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321878.10
ENST00000635205.1
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp CCTCCAAGCCCAAGGTGTGATAGCAGGGCCTGCCGTGTTCAGGAGCACACAGCAGACCAGCCCTCCACCTaGGGCTGCTGTGGTGGACGG +
Preference number: 4 (lower is better)
Translates to: PPSPRCDSRACRVQEHTADQPST*GCCGGR
Trigger: CCGTCCACCACAGCAGCCCCAGGTGGAGGGCTGGTC...TGCTGTGTGCTCCTGAACACGGCAGGCCCTGCTATCACACCTTGGGCTTGGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321878.10
ENST00000635205.1
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp AGTCCTGGTGCTGCTGAGATGGGCGCTGCCTCCTCCCACCCACAGCGCGTCATCACGAATAGGTACGGCTaGGTCAGTGGGCGGGCCCTT +
Preference number: 4 (lower is better)
Translates to: SPGAAEMGAASSHPQRVITNRYG*VSGRAL
Trigger: AAGGGCCCGCCCACTGACCCAGCCGTACCTATTCGT...GATGACGCGCTGTGGGTGGGAGGAGGCAGCGCCCATCTCAGCAGCACCAGGACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp CACAGGGAACACCCGCACCCAGACCGTGCCGTCTGGCAGGCACTTTCGGCCTCATGCTACGGGGCACCGTaGACGAATAGGTACGGCTGG +
Preference number: 4 (lower is better)
Translates to: HREHPHPDRAVWQALSASCYGAP*TNRYGW
Trigger: CCAGCCGTACCTATTCGTCCACGGTGCCCCGTAGCA...TGAGGCCGAAAGTGCCTGCCAGACGGCACGGTCTGGGTGCGGGTGTTCCCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp ACTTCACGCCAGCCGCCAGCCTGTAGGGCCGGCAGAGCCGAAGACCCAGTGAGTTGCTACGGGGCACCGTaGACGAATAGGTACGGCTGG +
Preference number: 4 (lower is better)
Translates to: TSRQPPACRAGRAEDPVSCYGAP*TNRYGW
Trigger: CCAGCCGTACCTATTCGTCCACGGTGCCCCGTAGCA...ACTCACTGGGTCTTCGGCTCTGCCGGCCCTACAGGCTGGCGGCTGGCGTGAAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp AATGACCTCCAAGCCCAAGGTGTGATAGCAGGGCCTGCCGTGTTCAGGAGCACAGGTTGGGGACCCCGATaGGCGGGCCCGGGCAGACGA +
Preference number: 4 (lower is better)
Translates to: NDLQAQGVIAGPAVFRSTGWGPR*AGPGRR
Trigger: TCGTCTGCCCGGGCCCGCCCATCGGGGTCCCCAACC...TGTGCTCCTGAACACGGCAGGCCCTGCTATCACACCTTGGGCTTGGAGGTCATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321878.10
ENST00000636657.1
CDS-3UTR CCA 90 bp GAAGGCCCAGAGGCAGCATGGAAATGCACTAGATCTGCAGAGGAGGGGGCTGCAGTGGGGCGGTGGCTCTaGCCCGGGAAGGCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: EGPEAAWKCTRSAEEGAAVGRWL*PGKALL
Trigger: CAGCAGAGCCTTCCCGGGCCAGAGCCACCGCCCCAC...TGCAGCCCCCTCCTCTGCAGATCTAGTGCATTTCCATGCTGCCTCTGGGCCTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
3UTR CAA 72 bp CCGTGTCTCCAGAGCATGGAGAAGGTAGAACTGGCTTaGTGGGGCGGTGGCTCTGGCCCGGGAAGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: PCLQSMEKVELA*WGGGSGPGRLC
Trigger: GCAGAGCCTTCCCGGGCCAGAGCCACCGCCCCACAAAGCCAGTTCTACCTTCTCCATGCTCTGGAGACACGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470411.2
3UTR CAA 72 bp TCCAGCCGGTGCCGGAGCTGTTCGCACGTGGAGAGTTaGCTCCCGAGGAAGGACAGGGGCCAGAGCTTGAAC +
Preference number: 4 (lower is better)
Translates to: SSRCRSCSHVES*LPRKDRGQSLN
Trigger: GTTCAAGCTCTGGCCCCTGTCCTTCCTCGGGAGCAAACTCTCCACGTGCGAACAGCTCCGGCACCGGCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636657.1
CDS-3UTR TCA 90 bp GGTCTAGGACAAAGTAGGCCGGTGGCAGGTGCGGACGACCACAGGCAAAGCTGCGCAGGCACTGACAGCTaGGACCAGCGACAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: GLGQSRPVAGADDHRQSCAGTDS*DQRQQA
Trigger: AGCCTGCTGTCGCTGGTCTCAGCTGTCAGTGCCTGC...GCAGCTTTGCCTGTGGTCGTCCGCACCTGCCACCGGCCTACTTTGTCCTAGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR TCA 90 bp CTGAAGCGGACTCGGGCTCACAGGGAACACCCGCACCCAGACCGTGCCGTCTGGGAACAGACGCCACAGTaGGGACAGGCCATGGATCTT +
Preference number: 4 (lower is better)
Translates to: LKRTRAHREHPHPDRAVWEQTPQ*GQAMDL
Trigger: AAGATCCATGGCCTGTCCTCACTGTGGCGTCTGTTC...CCAGACGGCACGGTCTGGGTGCGGGTGTTCCCTGTGAGCCCGAGTCCGCTTCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR TCA 90 bp GAAGCGGACTCGGGCTCACAGGGAACACCCGCACCCAGACCGTGCCGTCTGGCAAGAGCAGAGTCCCGATaGACAGCTGGTCCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: EADSGSQGTPAPRPCRLARAESR*TAGPGH
Trigger: ATGACCTGGACCAGCTGTTCATCGGGACTCTGCTCT...TGCCAGACGGCACGGTCTGGGTGCGGGTGTTCCCTGTGAGCCCGAGTCCGCTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR TCA 90 bp TCCACGAGCAGATGGATCAGGCCCTGCACGGCGACCACCAGGAGCCGGAGCAGGAGAGCAGAGTCCCGATaGACAGCTGGTCCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: STSRWIRPCTATTRSRSRRAESR*TAGPGH
Trigger: ATGACCTGGACCAGCTGTTCATCGGGACTCTGCTCT...CCTGCTCCGGCTCCTGGTGGTCGCCGTGCAGGGCCTGATCCATCTGCTCGTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000635909.1
ENST00000636657.1
ENST00000638143.1
CDS-3UTR TCA 90 bp CACCGTGGACGAATAGGTACGGCTGGGTCAGTGGGCGGGCCCTTGACACTGAGGGCCTCCAGGGGTAGATaGGCTCCCCAAGGAACAGCT +
Preference number: 4 (lower is better)
Translates to: HRGRIGTAGSVGGPLTLRASRGR*APQGTA
Trigger: AGCTGTTCCTTGGGGAGCTCATCTACCCCTGGAGGC...CCTCAGTGTCAAGGGCCCGCCCACTGACCCAGCCGTACCTATTCGTCCACGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR TCA 90 bp TGGTGCCAGGCGAGCCAGCAGTTCCCTCAGTCCTGCTTGTCCCCTCTCTGCCTCGCCTCCAGGGGTAGATaGGCTCCCCAAGGAACAGCT +
Preference number: 4 (lower is better)
Translates to: WCQASQQFPQSCLSPLCLASRGR*APQGTA
Trigger: AGCTGTTCCTTGGGGAGCTCATCTACCCCTGGAGGC...GAGGCAGAGAGGGGACAAGCAGGACTGAGGGAACTGCTGGCTCGCCTGGCACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000443147.5
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR TCA 90 bp GCAGGCCGAGAGGCCCACGTGCCAAAGGATGTGCTCCACGAAGGGGGACATGAGGCCTCCAGGGGTAGATaGGCTCCCCAAGGAACAGCT +
Preference number: 4 (lower is better)
Translates to: AGREAHVPKDVLHEGGHEASRGR*APQGTA
Trigger: AGCTGTTCCTTGGGGAGCTCATCTACCCCTGGAGGC...CTCATGTCCCCCTTCGTGGAGCACATCCTTTGGCACGTGGGCCTCTCGGCCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000635909.1
ENST00000636657.1
CDS-3UTR TCA 90 bp GGTGCTGCTGAGATGGGCGCTGCCTCCTCCCACCCACAGCGCGTCATCCCCTCATCTGCTCACTCCCAATaGCCTCCAAGCCCAAGGTGT +
Preference number: 4 (lower is better)
Translates to: GAAEMGAASSHPQRVIPSSAHSQ*PPSPRC
Trigger: ACACCTTGGGCTTGGAGGTCATTGGGAGTGAGCAGA...TGAGGGGATGACGCGCTGTGGGTGGGAGGAGGCAGCGCCCATCTCAGCAGCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR TCA 90 bp GAGCAGATGGCTGGCTGTGGCCGTGTGGTGGTGCCAGGCGAGCCAGCAGTTCCCTCTGCTCACTCCCAATaGCCTCCAAGCCCAAGGTGT +
Preference number: 4 (lower is better)
Translates to: EQMAGCGRVVVPGEPAVPSAHSQ*PPSPRC
Trigger: ACACCTTGGGCTTGGAGGTCATTGGGAGTGAGCAGA...GGGAACTGCTGGCTCGCCTGGCACCACCACACGGCCACAGCCAGCCATCTGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000321878.10
ENST00000540241.1
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR TCA 90 bp GCAGTGGGTTTATCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGATCTGCTCACTCCCAATaGCCTCCAAGCCCAAGGTGT +
Preference number: 4 (lower is better)
Translates to: AVGLSASGGGGACRPRAGSAHSQ*PPSPRC
Trigger: ACACCTTGGGCTTGGAGGTCATTGGGAGTGAGCAGA...TCCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGATAAACCCACTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR TCA 90 bp ACGTTCCACTTCTTCCCCCGGAACAGACGCCACAGTGAGGACAGGCCATGGATCGGCAGGCAGTGCCAGTaGTGGAGTGCGGCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: TFHFFPRNRRHSEDRPWIGRQCQ*WSAASL
Trigger: CAGGCTGGCCGCACTCCATCACTGGCACTGCCTGCC...GATCCATGGCCTGTCCTCACTGTGGCGTCTGTTCCGGGGGAAGAAGTGGAACGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635909.1
ENST00000636657.1
CDS-3UTR TCA 90 bp AGCACACAGCAGCGTCCACAAAGCACAGGACATGCGCCAGCTGAGCTGGTGCCATGCTCGCCACCATGGTaGCCGCAGCAGGTGGGAAGC +
Preference number: 4 (lower is better)
Translates to: STQQRPQSTGHAPAELVPCSPPW*PQQVGS
Trigger: GCTTCCCACCTGCTGCGGTCACCATGGTGGCGAGCA...TGGCACCAGCTCAGCTGGCGCATGTCCTGTGCTTTGTGGACGCTGCTGTGTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321878.10
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR TCA 90 bp AAGCGACCTCTCCAGGGAACATCCGCAAATAAACCCCGTGTGGTTCAGGGAGTGGTGTGGTTCAGGGAGTaGGGGCCCGGGCCCGCTGGG +
Preference number: 4 (lower is better)
Translates to: KRPLQGTSANKPRVVQGVVWFRE*GPGPAG
Trigger: CCCAGCGGGCCCGGGCCCTCACTCCCTGAACCACAC...CACTCCCTGAACCACACGGGGTTTATTTGCGGATGTTCCCTGGAGAGGTCGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR TCA 90 bp TCCTCCCACCCACAGCGCGTCATCCCCTCACCAGCCGGCACCTGCAGGCTCCCCATGCTCACAGCCTGCTaGTGGTTTCTTCACAAAGCG +
Preference number: 4 (lower is better)
Translates to: SSHPQRVIPSPAGTCRLPMLTAC*WFLHKA
Trigger: CGCTTTGTGAAGAAACCATCAGCAGGCTGTGAGCAT...GGGGAGCCTGCAGGTGCCGGCTGGTGAGGGGATGACGCGCTGTGGGTGGGAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp GCACTTTTGCAAAAGGGAGGTCTAGGACAAAGTAGGCCGGTGGCAGGTGCGGACCCAGGACCACGGCGCTaGTCTGCTCCGGCACCCACC +
Preference number: 4 (lower is better)
Translates to: ALLQKGGLGQSRPVAGADPGPRR*SAPAPT
Trigger: GGTGGGTGCCGGAGCAGAGCAGCGCCGTGGTCCTGG...GTCCGCACCTGCCACCGGCCTACTTTGTCCTAGACCTCCCTTTTGCAAAAGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR GCA 90 bp GAAGGCCCAGAGGCAGCATGGAAATGCACTAGATCTGCAGAGGAGGGGGCTGCACTCTCCTCGGGCTCCTaGCGGCAGTGGCACCAGGTG +
Preference number: 4 (lower is better)
Translates to: EGPEAAWKCTRSAEEGAALSSGS*RQWHQV
Trigger: CACCTGGTGCCACTGCCGGCAGGAGCCCGAGGAGAG...TGCAGCCCCCTCCTCTGCAGATCTAGTGCATTTCCATGCTGCCTCTGGGCCTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR GCA 90 bp GCGGTAGGTGTGCACCACGCGGCTGTAGGGCAGTGGGTTTATCTGCATCAGGAGCGCAGCTCCAGAACGTaGCGCCTCTCTCCCGGCACA +
Preference number: 4 (lower is better)
Translates to: AVGVHHAAVGQWVYLHQERSSRT*RLSPGT
Trigger: TGTGCCGGGAGAGAGGCGGCACGTTCTGGAGCTGCG...CTCCTGATGCAGATAAACCCACTGCCCTACAGCCGCGTGGTGCACACCTACCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443147.5
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp GGTGTGATAGCAGGGCCTGCCGTGTTCAGGAGCACACAGCAGCGTCCACAAAGCCGCAGCTCCAGAACGTaGCGCCTCTCTCCCGGCACA +
Preference number: 4 (lower is better)
Translates to: GVIAGPAVFRSTQQRPQSRSSRT*RLSPGT
Trigger: TGTGCCGGGAGAGAGGCGGCACGTTCTGGAGCTGCG...GCTTTGTGGACGCTGCTGTGTGCTCCTGAACACGGCAGGCCCTGCTATCACACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp CCTCCAAGCCCAAGGTGTGATAGCAGGGCCTGCCGTGTTCAGGAGCACACAGCACGCAGCTCCAGAACGTaGCGCCTCTCTCCCGGCACA +
Preference number: 4 (lower is better)
Translates to: PPSPRCDSRACRVQEHTARSSRT*RLSPGT
Trigger: TGTGCCGGGAGAGAGGCGGCACGTTCTGGAGCTGCG...TGCTGTGTGCTCCTGAACACGGCAGGCCCTGCTATCACACCTTGGGCTTGGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp TCCACAGAGGCCCGAGGGTGGGCCAAAGAGTCAGGTACCACCCCCAGCAGGAAGGAGCACCTCACTGCGTaGTACCGTGTCGAAGACGGC +
Preference number: 4 (lower is better)
Translates to: STEARGWAKESGTTPSRKEHLTA*YRVEDG
Trigger: GCCGTCTTCGACACGGTAGCACGCAGTGAGGTGCTC...CTTCCTGCTGGGGGTGGTACCTGACTCTTTGGCCCACCCTCGGGCCTCTGTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR GCA 90 bp CCTCCTGAAGCGGACTCGGGCTCACAGGGAACACCCGCACCCAGACCGTGCCGTGGAAGAGCACCTCACTaGGTGCTACCGTGTCGAAGA +
Preference number: 4 (lower is better)
Translates to: PPEADSGSQGTPAPRPCRGRAPH*VLPCRR
Trigger: TCTTCGACACGGTAGCACGCAGTGAGGTGCTCTTCC...ACGGCACGGTCTGGGTGCGGGTGTTCCCTGTGAGCCCGAGTCCGCTTCAGGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000636657.1
CDS-3UTR GCA 90 bp GCAGTGGGTTTATCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGAGGAAGAGCACCTCACTaGGTGCTACCGTGTCGAAGA +
Preference number: 4 (lower is better)
Translates to: AVGLSASGGGGACRPRAGGRAPH*VLPCRR
Trigger: TCTTCGACACGGTAGCACGCAGTGAGGTGCTCTTCC...TCCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGATAAACCCACTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443147.5
ENST00000636657.1
CDS-3UTR GCA 90 bp CACGGAACTTCACGCCAGCCGCCAGCCTGTAGGGCCGGCAGAGCCGAAGACCCAGGAAGAGCACCTCACTaGGTGCTACCGTGTCGAAGA +
Preference number: 4 (lower is better)
Translates to: HGTSRQPPACRAGRAEDPGRAPH*VLPCRR
Trigger: TCTTCGACACGGTAGCACGCAGTGAGGTGCTCTTCC...TGGGTCTTCGGCTCTGCCGGCCCTACAGGCTGGCGGCTGGCGTGAAGTTCCGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636657.1
CDS-3UTR GCA 90 bp GCACCTGCAGGCTCCCCTCCTGAAGCGGACTCGGGCTCACAGGGAACACCCGCACATCAAAGCGGTCACTaGGGAAGAGCACCTCACTGC +
Preference number: 4 (lower is better)
Translates to: APAGSPPEADSGSQGTPAHQSGH*GRAPHC
Trigger: GCAGTGAGGTGCTCTTCCGCAGTGACCGCTTTGATG...TGCGGGTGTTCCCTGTGAGCCCGAGTCCGCTTCAGGAGGGGAGCCTGCAGGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000636657.1
CDS-3UTR GCA 90 bp GCACTTTTGCAAAAGGGAGGTCTAGGACAAAGTAGGCCGGTGGCAGGTGCGGACCCAGCTCCGCGAGGATaGTGGCCTCCACGCCCTCCG +
Preference number: 4 (lower is better)
Translates to: ALLQKGGLGQSRPVAGADPAPRG*WPPRPP
Trigger: CGGAGGGCGTGGAGGCCAGCATCCTCGCGGAGCTGG...GTCCGCACCTGCCACCGGCCTACTTTGTCCTAGACCTCCCTTTTGCAAAAGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR GCA 90 bp TCCACAGAGGCCCGAGGGTGGGCCAAAGAGTCAGGTACCACCCCCAGCAGGAAGCGCACGTGGAGAGTTTaGTCCCGAGGAAGGACAGGG +
Preference number: 4 (lower is better)
Translates to: STEARGWAKESGTTPSRKRTWRV*SRGRTG
Trigger: CCCTGTCCTTCCTCGGGAGCAAACTCTCCACGTGCG...CTTCCTGCTGGGGGTGGTACCTGACTCTTTGGCCCACCCTCGGGCCTCTGTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR GCA 90 bp TGTGGCCGTGTGGTGGTGCCAGGCGAGCCAGCAGTTCCCTCAGTCCTGCTTGTCGCACCCATCAGCCACTaGAGCAGATGCTGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: CGRVVVPGEPAVPSVLLVAPISH*SRCWSS
Trigger: GGAGCTCCAGCATCTGCTGCAGTGGCTGATGGGTGC...GACAAGCAGGACTGAGGGAACTGCTGGCTCGCCTGGCACCACCACACGGCCACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000443147.5
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR GCA 90 bp GGGTTTATCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGAGGACAACGTGCCAAAGGATGTaGTCCACGAAGGGGGACATG +
Preference number: 4 (lower is better)
Translates to: GFICIRRRRGLPASCRRTTCQRM*STKGDM
Trigger: CATGTCCCCCTTCGTGGAGCACATCCTTTGGCACGT...TGTCCTCCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGATAAACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000443147.5
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR GCA 90 bp CTGAAGCGGACTCGGGCTCACAGGGAACACCCGCACCCAGACCGTGCCGTCTGGACGTGCCAAAGGATGTaGTCCACGAAGGGGGACATG +
Preference number: 4 (lower is better)
Translates to: LKRTRAHREHPHPDRAVWTCQRM*STKGDM
Trigger: CATGTCCCCCTTCGTGGAGCACATCCTTTGGCACGT...CCAGACGGCACGGTCTGGGTGCGGGTGTTCCCTGTGAGCCCGAGTCCGCTTCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp GCCCAAGGTGTGATAGCAGGGCCTGCCGTGTTCAGGAGCACACAGCAGCGTCCAAGATGGATCAGGCCCTaGACGGCGACCACCAGGAGC +
Preference number: 4 (lower is better)
Translates to: AQGVIAGPAVFRSTQQRPRWIRP*TATTRS
Trigger: GCTCCTGGTGGTCGCCGTGCAGGGCCTGATCCATCT...TGGACGCTGCTGTGTGCTCCTGAACACGGCAGGCCCTGCTATCACACCTTGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321878.10
ENST00000540241.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR GCA 90 bp CACCAGGAGCCGGAGCAGGGTGAACACCAGGTAGTACAGGGCTGTGGTAGGCAGAGATGGATCAGGCCCTaGACGGCGACCACCAGGAGC +
Preference number: 4 (lower is better)
Translates to: HQEPEQGEHQVVQGCGRQRWIRP*TATTRS
Trigger: GCTCCTGGTGGTCGCCGTGCAGGGCCTGATCCATCT...CTGCCTACCACAGCCCTGTACTACCTGGTGTTCACCCTGCTCCGGCTCCTGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000635909.1
ENST00000636657.1
ENST00000638143.1
CDS-3UTR GCA 90 bp ACTCCCAATGACCTCCAAGCCCAAGGTGTGATAGCAGGGCCTGCCGTGTTCAGGCCCCAAGGAACAGCTTaGGGCACAGGGCGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: TPNDLQAQGVIAGPAVFRPQGTA*GTGRPR
Trigger: CCTGGGGCGCCCTGTGCCGCAAGCTGTTCCTTGGGG...CCTGAACACGGCAGGCCCTGCTATCACACCTTGGGCTTGGAGGTCATTGGGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000321878.10
ENST00000540241.1
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR GCA 90 bp GCTGTAGGGCAGTGGGTTTATCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCCAGTTCCCTCAGTCCTaGTTGTCCCCTCTCTGCCTC +
Preference number: 4 (lower is better)
Translates to: AVGQWVYLHQEAEGPAGLQFPQS*LSPLCL
Trigger: GAGGCAGAGAGGGGACAAGCAGGACTGAGGGAACTG...GAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGATAAACCCACTGCCCTACAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000443147.5
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR GCA 90 bp GGTCTAGGACAAAGTAGGCCGGTGGCAGGTGCGGACGACCACAGGCAAAGCTGCAGCCCGGCTGGCTCCTaGACACAGCCCCTTCAGAAG +
Preference number: 4 (lower is better)
Translates to: GLGQSRPVAGADDHRQSCSPAGS*TQPLQK
Trigger: CTTCTGAAGGGGCTGTGTGCAGGAGCCAGCCGGGCT...GCAGCTTTGCCTGTGGTCGTCCGCACCTGCCACCGGCCTACTTTGTCCTAGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR GCA 90 bp CTGGCCACAAGCAGGCCCAGTGCACACCTGCAGCCCACACAAGACCCACCCAGTACGGGGCACAGACCATaGAGGGAAGGTGGGAGATGG +
Preference number: 4 (lower is better)
Translates to: LATSRPSAHLQPTQDPPSTGHRP*REGGRW
Trigger: CCATCTCCCACCTTCCCTGCATGGTCTGTGCCCCGT...ACTGGGTGGGTCTTGTGTGGGCTGCAGGTGTGCACTGGGCCTGCTTGTGGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR GCA 90 bp CCCCAGAGAGCCAGGAGGGCAACGCTGATCTCAGGGACCACAAGGGAGATACCATGGGCTGGAGCTCCCTaGACCCCCACAGCCACACAG +
Preference number: 4 (lower is better)
Translates to: PQRARRATLISGTTREIPWAGAP*TPTATQ
Trigger: CTGTGTGGCTGTGGGGGTGCAGGGAGCTCCAGCCCA...TGGTATCTCCCTTGTGGTCCCTGAGATCAGCGTTGCCCTCCTGGCTCTCTGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR GCA 90 bp TGTGGCCGTGTGGTGGTGCCAGGCGAGCCAGCAGTTCCCTCAGTCCTGCTTGTCGGGAACAGAGCAGGATaGACACGTCGGGGTGGTGTG +
Preference number: 4 (lower is better)
Translates to: CGRVVVPGEPAVPSVLLVGNRAG*TRRGGV
Trigger: CACACCACCCCGACGTGTGCATCCTGCTCTGTTCCC...GACAAGCAGGACTGAGGGAACTGCTGGCTCGCCTGGCACCACCACACGGCCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443147.5
CDS-3UTR GCA 90 bp GTTCAGGGGAGGGCCGTGTCTCCAGAGCATGGAGAAGGTAGAACTGGCTTTGTGGCACGCACCCAGCCCTaGAGAGACCAGGGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: VQGRAVSPEHGEGRTGFVARTQP*RDQGRP
Trigger: GGGCCTGCCCTGGTCTCTGCAGGGCTGGGTGCGTGC...CACAAAGCCAGTTCTACCTTCTCCATGCTCTGGAGACACGGCCCTCCCCTGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470411.2
CDS-3UTR CCA 90 bp CCAGAGAGCCAGGAGGGCAACGCTGATCTCAGGGACCACAAGGGAGATACCAGGCGCAGCCAGGGCTCATaGGGGAAGACAGCACCCAGG +
Preference number: 4 (lower is better)
Translates to: PESQEGNADLRDHKGDTRRSQGS*GKTAPR
Trigger: CCTGGGTGCTGTCTTCCCCCATGAGCCCTGGCTGCG...CCTGGTATCTCCCTTGTGGTCCCTGAGATCAGCGTTGCCCTCCTGGCTCTCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR CCA 90 bp TTCCACTTCTTCCCCCGGAACAGACGCCACAGTGAGGACAGGCCATGGATCTTCGTGGGCGCTTGCCGGTaGGTGGCCTCGCAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: FHFFPRNRRHSEDRPWIFVGACR*VASQLQ
Trigger: CTGGAGCTGCGAGGCCACCCACCGGCAAGCGCCCAC...GAAGATCCATGGCCTGTCCTCACTGTGGCGTCTGTTCCGGGGGAAGAAGTGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp GGACCTGCTGCTACGGGGCACCGTGGACGAATAGGTACGGCTGGGTCAGTGGGCGGAGCTGTTCGCACGTaGAGAGTTTGCTCCCGAGGA +
Preference number: 4 (lower is better)
Translates to: GPAATGHRGRIGTAGSVGGAVRT*RVCSRG
Trigger: TCCTCGGGAGCAAACTCTCCACGTGCGAACAGCTCC...GCCCACTGACCCAGCCGTACCTATTCGTCCACGGTGCCCCGTAGCAGCAGGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp CCTGGCCACAAGCAGGCCCAGTGCACACCTGCAGCCCACACAAGACCCACCCAGGGAGCTGTTCGCACGTaGAGAGTTTGCTCCCGAGGA +
Preference number: 4 (lower is better)
Translates to: PGHKQAQCTPAAHTRPTQGAVRT*RVCSRG
Trigger: TCCTCGGGAGCAAACTCTCCACGTGCGAACAGCTCC...CTGGGTGGGTCTTGTGTGGGCTGCAGGTGTGCACTGGGCCTGCTTGTGGCCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR CCA 90 bp ATGGAGTGCGGCCAGCCTGGCTGGCCACCCCCACATCTGCTCACTCCCAATGACGCCTTCCTCATCAGCTaGGCAGGGTTCTCCGCCTTC +
Preference number: 4 (lower is better)
Translates to: MECGQPGWPPPHLLTPNDAFLIS*AGFSAF
Trigger: GAAGGCGGAGAACCCTGCCCAGCTGATGAGGAAGGC...GTCATTGGGAGTGAGCAGATGTGGGGGTGGCCAGCCAGGCTGGCCGCACTCCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321878.10
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR CCA 90 bp GCTGGGGAGGCGGTAGGTGTGCACCACGCGGCTGTAGGGCAGTGGGTTTATCTGCAGAGGCCACCGTGTTaGCCTTCCTCATCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: AGEAVGVHHAAVGQWVYLQRPPC*PSSSAG
Trigger: CCCAGCTGATGAGGAAGGCCAACACGGTGGCCTCTG...CAGATAAACCCACTGCCCTACAGCCGCGTGGTGCACACCTACCGCCTCCCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000443147.5
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR CCA 90 bp TCCACAGAGGCCCGAGGGTGGGCCAAAGAGTCAGGTACCACCCCCAGCAGGAAGATGCGGCTTCTCCCGTaGAGCCAGGACAGCAGCATG +
Preference number: 4 (lower is better)
Translates to: STEARGWAKESGTTPSRKMRLLP*SQDSSM
Trigger: CATGCTGCTGTCCTGGCTCCACGGGAGAAGCCGCAT...CTTCCTGCTGGGGGTGGTACCTGACTCTTTGGCCCACCCTCGGGCCTCTGTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR CCA 90 bp GAGTTGATGAGGTCCACGAGCAGATGGATCAGGCCCTGCACGGCGACCACCAGGCACTGCAGCAGATGCTaGAGCTCCTCGGCCACGTGG +
Preference number: 4 (lower is better)
Translates to: ELMRSTSRWIRPCTATTRHCSRC*SSSATW
Trigger: CCACGTGGCCGAGGAGCTCCAGCATCTGCTGCAGTG...CCTGGTGGTCGCCGTGCAGGGCCTGATCCATCTGCTCGTGGACCTCATCAACTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000635909.1
ENST00000636657.1
ENST00000637468.1
ENST00000638143.1
CDS-3UTR CCA 90 bp CACCGTGGACGAATAGGTACGGCTGGGTCAGTGGGCGGGCCCTTGACACTGAGGAAGCGGCCCAGCACCTaGTCCAGTGCACGGTTCATC +
Preference number: 4 (lower is better)
Translates to: HRGRIGTAGSVGGPLTLRKRPST*SSARFI
Trigger: GATGAACCGTGCACTGGACCAGGTGCTGGGCCGCTT...CCTCAGTGTCAAGGGCCCGCCCACTGACCCAGCCGTACCTATTCGTCCACGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp CACCCGCACCCAGACCGTGCCGTCTGGCAGGCACTTTCGGCCTCAGTGCCACGGAGTGAGGACAGGCCATaGATCTTCAGGCAGTACAGC +
Preference number: 4 (lower is better)
Translates to: HPHPDRAVWQALSASVPRSEDRP*IFRQYS
Trigger: GCTGTACTGCCTGAAGATCCATGGCCTGTCCTCACT...CCGTGGCACTGAGGCCGAAAGTGCCTGCCAGACGGCACGGTCTGGGTGCGGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp TCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGAGGACACGGAACTAGTGAGGACAGGCCATaGATCTTCAGGCAGTACAGC +
Preference number: 4 (lower is better)
Translates to: SASGGGGACRPRAGGHGTSEDRP*IFRQYS
Trigger: GCTGTACTGCCTGAAGATCCATGGCCTGTCCTCACT...AGTTCCGTGTCCTCCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443147.5
ENST00000635205.1
ENST00000635909.1
ENST00000636657.1
ENST00000637468.1
CDS-3UTR CCA 90 bp GCATGGGGCAGTGCTCTGGACACCTGGGGTTGCTGTGCTCGCCACCATGGTGACCAGGAGTCCACGCGCTaGCGCAGAACGTTCCACTTC +
Preference number: 4 (lower is better)
Translates to: AWGSALDTWGCCARHHGDQESTR*RRTFHF
Trigger: GAAGTGGAACGTTCTGCGCCAGCGCGTGGACTCCTG...GTCACCATGGTGGCGAGCACAGCAACCCCAGGTGTCCAGAGCACTGCCCCATGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321878.10
ENST00000635205.1
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp TGTGGCCGTGTGGTGGTGCCAGGCGAGCCAGCAGTTCCCTCAGTCCTGCTTGTCCAGGAGTCCACGCGCTaGCGCAGAACGTTCCACTTC +
Preference number: 4 (lower is better)
Translates to: CGRVVVPGEPAVPSVLLVQESTR*RRTFHF
Trigger: GAAGTGGAACGTTCTGCGCCAGCGCGTGGACTCCTG...GACAAGCAGGACTGAGGGAACTGCTGGCTCGCCTGGCACCACCACACGGCCACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443147.5
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR CCA 90 bp CAAGGTGTGATAGCAGGGCCTGCCGTGTTCAGGAGCACACAGCAGCGTCCACAACGCCCCAGGAGTGCTTaGGGTGGCAGCCACAGCTGG +
Preference number: 4 (lower is better)
Translates to: QGVIAGPAVFRSTQQRPQRPRSA*GGSHSW
Trigger: CCAGCTGTGGCTGCCACCCCAAGCACTCCTGGGGCG...TTGTGGACGCTGCTGTGTGCTCCTGAACACGGCAGGCCCTGCTATCACACCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000321878.10
ENST00000540241.1
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR CCA 90 bp CGGCAGAGCCGAAGACCCAGTGAGTACAGCGGCAGGGAGTTGATGAGGTCCACGGAGCTGGTGCCACCCTaGCAGAGCAGATGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: RQSRRPSEYSGRELMRSTELVPP*QSRWLA
Trigger: AGCCAGCCATCTGCTCTGCCAGGGTGGCACCAGCTC...CGTGGACCTCATCAACTCCCTGCCGCTGTACTCACTGGGTCTTCGGCTCTGCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR CCA 90 bp GGTGTGATAGCAGGGCCTGCCGTGTTCAGGAGCACACAGCAGCGTCCACAAAGCGGTGACCGCAGCAGGTaGGAAGCGGGTCCCAAGGCA +
Preference number: 4 (lower is better)
Translates to: GVIAGPAVFRSTQQRPQSGDRSR*EAGPKA
Trigger: TGCCTTGGGACCCGCTTCCCACCTGCTGCGGTCACC...GCTTTGTGGACGCTGCTGTGTGCTCCTGAACACGGCAGGCCCTGCTATCACACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321878.10
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR CCA 90 bp TGGTGCCAGGCGAGCCAGCAGTTCCCTCAGTCCTGCTTGTCCCCTCTCTGCCTCCATGGGGCAGTGCTCTaGACACCTGGGGTTGCTGTG +
Preference number: 4 (lower is better)
Translates to: WCQASQQFPQSCLSPLCLHGAVL*TPGVAV
Trigger: CACAGCAACCCCAGGTGTCCAGAGCACTGCCCCATG...GAGGCAGAGAGGGGACAAGCAGGACTGAGGGAACTGCTGGCTCGCCTGGCACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000635205.1
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp GTGGTGCCAGGCGAGCCAGCAGTTCCCTCAGTCCTGCTTGTCCCCTCTCTGCCTTACACAGGGTGGGCATaGGGCAGTGCTCTGGACACC +
Preference number: 4 (lower is better)
Translates to: VVPGEPAVPSVLLVPSLPYTGWA*GSALDT
Trigger: GGTGTCCAGAGCACTGCCCCATGCCCACCCTGTGTA...AGGCAGAGAGGGGACAAGCAGGACTGAGGGAACTGCTGGCTCGCCTGGCACCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000635205.1
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp AGCCCAAGGTGTGATAGCAGGGCCTGCCGTGTTCAGGAGCACACAGCAGCGTCCCCTGGGTACACAGGGTaGGCATGGGGCAGTGCTCTG +
Preference number: 4 (lower is better)
Translates to: SPRCDSRACRVQEHTAASPGYTG*AWGSAL
Trigger: CAGAGCACTGCCCCATGCCCACCCTGTGTACCCAGG...GGACGCTGCTGTGTGCTCCTGAACACGGCAGGCCCTGCTATCACACCTTGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321878.10
ENST00000635205.1
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp CCTCCAAGCCCAAGGTGTGATAGCAGGGCCTGCCGTGTTCAGGAGCACACAGCACACCTGGGGCTGCTGTaGTGGACGGACCCTCTGGAC +
Preference number: 4 (lower is better)
Translates to: PPSPRCDSRACRVQEHTAHLGLL*WTDPLD
Trigger: GTCCAGAGGGTCCGTCCACCACAGCAGCCCCAGGTG...TGCTGTGTGCTCCTGAACACGGCAGGCCCTGCTATCACACCTTGGGCTTGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321878.10
ENST00000635205.1
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp CATGGGGCAGTGCTCTGGACACCTGGGGTTGCTGTGCTCGCCACCATGGTGACCACGAATAGGTACGGCTaGGTCAGTGGGCGGGCCCTT +
Preference number: 4 (lower is better)
Translates to: HGAVLWTPGVAVLATMVTTNRYG*VSGRAL
Trigger: AAGGGCCCGCCCACTGACCCAGCCGTACCTATTCGT...GGTCACCATGGTGGCGAGCACAGCAACCCCAGGTGTCCAGAGCACTGCCCCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp GGACGAATAGGTACGGCTGGGTCAGTGGGCGGGCCCTTGACACTGAGGCTGCTCGGCTTCCTCCTTCCCTaGGAGGCCCATGAAGGGAGA +
Preference number: 4 (lower is better)
Translates to: GRIGTAGSVGGPLTLRLLGFLLP*EAHEGR
Trigger: TCTCCCTTCATGGGCCTCCCAGGGAAGGAGGAAGCC...GAGCAGCCTCAGTGTCAAGGGCCCGCCCACTGACCCAGCCGTACCTATTCGTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp GCAGCAGGTGGGAAGCGGGTCCCAAGGCAGGCAGTGCCAGTGATGGAGTGCGGCGCGGCTGTAGGGCAGTaGGTTTATCTGCATCAGGAG +
Preference number: 4 (lower is better)
Translates to: AAGGKRVPRQAVPVMECGAAVGQ*VYLHQE
Trigger: CTCCTGATGCAGATAAACCCACTGCCCTACAGCCGC...GCCGCACTCCATCACTGGCACTGCCTGCCTTGGGACCCGCTTCCCACCTGCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321878.10
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR CCA 90 bp CGCAGCAGGTGGGAAGCGGGTCCCAAGGCAGGCAGTGCCAGTGATGGAGTGCGGGCGGCTGTAGGGCAGTaGGTTTATCTGCATCAGGAG +
Preference number: 4 (lower is better)
Translates to: RSRWEAGPKAGSASDGVRAAVGQ*VYLHQE
Trigger: CTCCTGATGCAGATAAACCCACTGCCCTACAGCCGC...CCGCACTCCATCACTGGCACTGCCTGCCTTGGGACCCGCTTCCCACCTGCTGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321878.10
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR CCA 90 bp GTCCTGGTGCTGCTGAGATGGGCGCTGCCTCCTCCCACCCACAGCGCGTCATCCGCGGCTGTAGGGCAGTaGGTTTATCTGCATCAGGAG +
Preference number: 4 (lower is better)
Translates to: VLVLLRWALPPPTHSASSAAVGQ*VYLHQE
Trigger: CTCCTGATGCAGATAAACCCACTGCCCTACAGCCGC...GGATGACGCGCTGTGGGTGGGAGGAGGCAGCGCCCATCTCAGCAGCACCAGGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp GTTCAGGGGAGGGCCGTGTCTCCAGAGCATGGAGAAGGTAGAACTGGCTTTGTGGTGGGGCGGTGGCTCTaGCCCGGGAAGGCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: VQGRAVSPEHGEGRTGFVVGRWL*PGKALL
Trigger: CAGCAGAGCCTTCCCGGGCCAGAGCCACCGCCCCAC...CACAAAGCCAGTTCTACCTTCTCCATGCTCTGGAGACACGGCCCTCCCCTGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470411.2
CDS-3UTR CCA 90 bp CCAGAGAGCCAGGAGGGCAACGCTGATCTCAGGGACCACAAGGGAGATACCAGGGAGATACCAGGACGCTaGGCCCACAGGGAGAGGCGG +
Preference number: 4 (lower is better)
Translates to: PESQEGNADLRDHKGDTREIPGR*AHRERR
Trigger: CCGCCTCTCCCTGTGGGCCCAGCGTCCTGGTATCTC...CCTGGTATCTCCCTTGTGGTCCCTGAGATCAGCGTTGCCCTCCTGGCTCTCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR CCA 90 bp CCAGAGAGCCAGGAGGGCAACGCTGATCTCAGGGACCACAAGGGAGATACCAGGGCAGGAAGTCCCAGCTaGGCTGCACATGGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: PESQEGNADLRDHKGDTRAGSPS*AAHGPP
Trigger: GGGAGGCCCATGTGCAGCCCAGCTGGGACTTCCTGC...CCTGGTATCTCCCTTGTGGTCCCTGAGATCAGCGTTGCCCTCCTGGCTCTCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR CCA 90 bp TCCACAGAGGCCCGAGGGTGGGCCAAAGAGTCAGGTACCACCCCCAGCAGGAAGGACAAAGTAGGCCGGTaGCAGGTGCGGACGACCACA +
Preference number: 4 (lower is better)
Translates to: STEARGWAKESGTTPSRKDKVGR*QVRTTT
Trigger: TGTGGTCGTCCGCACCTGCCACCGGCCTACTTTGTC...CTTCCTGCTGGGGGTGGTACCTGACTCTTTGGCCCACCCTCGGGCCTCTGTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR TCA 90 bp CAAGGTGTGATAGCAGGGCCTGCCGTGTTCAGGAGCACACAGCAGCGTCCACAAGTGCACGGTTCATCTTaGGCCCGGCGGGAGCACCCA +
Preference number: 4 (lower is better)
Translates to: QGVIAGPAVFRSTQQRPQVHGSS*ARREHP
Trigger: TGGGTGCTCCCGCCGGGCTCAAGATGAACCGTGCAC...TTGTGGACGCTGCTGTGTGCTCCTGAACACGGCAGGCCCTGCTATCACACCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321878.10
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR TCA 90 bp CCCAGTGAGTACAGCGGCAGGGAGTTGATGAGGTCCACGAGCAGATGGATCAGGGTGCACGGTTCATCTTaGGCCCGGCGGGAGCACCCA +
Preference number: 4 (lower is better)
Translates to: PSEYSGRELMRSTSRWIRVHGSS*ARREHP
Trigger: TGGGTGCTCCCGCCGGGCTCAAGATGAACCGTGCAC...CCTGATCCATCTGCTCGTGGACCTCATCAACTCCCTGCCGCTGTACTCACTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000635909.1
ENST00000636657.1
ENST00000637468.1
CDS-3UTR TCA 90 bp GCTGTAGGGCAGTGGGTTTATCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGAACAGACGCCACAGTaGGGACAGGCCATGGATCTT +
Preference number: 4 (lower is better)
Translates to: AVGQWVYLHQEAEGPAGLEQTPQ*GQAMDL
Trigger: AAGATCCATGGCCTGTCCTCACTGTGGCGTCTGTTC...GAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGATAAACCCACTGCCCTACAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000443147.5
ENST00000635205.1
ENST00000635909.1
ENST00000636657.1
CDS-3UTR TCA 90 bp CCGTGTGGTGGTGCCAGGCGAGCCAGCAGTTCCCTCAGTCCTGCTTGTCCCCTCGAACAGACGCCACAGTaGGGACAGGCCATGGATCTT +
Preference number: 4 (lower is better)
Translates to: PCGGARRASSSLSPACPLEQTPQ*GQAMDL
Trigger: AAGATCCATGGCCTGTCCTCACTGTGGCGTCTGTTC...GAGGGGACAAGCAGGACTGAGGGAACTGCTGGCTCGCCTGGCACCACCACACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000443147.5
ENST00000635205.1
ENST00000635909.1
ENST00000636657.1
CDS-3UTR TCA 90 bp TCACGCCAGCCGCCAGCCTGTAGGGCCGGCAGAGCCGAAGACCCAGTGAGTACAGAACAGACGCCACAGTaGGGACAGGCCATGGATCTT +
Preference number: 4 (lower is better)
Translates to: SRQPPACRAGRAEDPVSTEQTPQ*GQAMDL
Trigger: AAGATCCATGGCCTGTCCTCACTGTGGCGTCTGTTC...TGTACTCACTGGGTCTTCGGCTCTGCCGGCCCTACAGGCTGGCGGCTGGCGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000635909.1
ENST00000636657.1
ENST00000637468.1
CDS-3UTR TCA 90 bp AATAGGTACGGCTGGGTCAGTGGGCGGGCCCTTGACACTGAGGCTGCTCCCGCCAGAGCAGAGTCCCGATaGACAGCTGGTCCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: NRYGWVSGRALDTEAAPARAESR*TAGPGH
Trigger: ATGACCTGGACCAGCTGTTCATCGGGACTCTGCTCT...GGCGGGAGCAGCCTCAGTGTCAAGGGCCCGCCCACTGACCCAGCCGTACCTATT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR TCA 90 bp GTGGCCGTGTGGTGGTGCCAGGCGAGCCAGCAGTTCCCTCAGTCCTGCTTGTCCAGAGCAGAGTCCCGATaGACAGCTGGTCCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: VAVWWCQASQQFPQSCLSRAESR*TAGPGH
Trigger: ATGACCTGGACCAGCTGTTCATCGGGACTCTGCTCT...GGACAAGCAGGACTGAGGGAACTGCTGGCTCGCCTGGCACCACCACACGGCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443147.5
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR TCA 90 bp ACTCCCAATGACCTCCAAGCCCAAGGTGTGATAGCAGGGCCTGCCGTGTTCAGGAGGACATGCGCCAGCTaGGCTGGTGCCACCCTGGCA +
Preference number: 4 (lower is better)
Translates to: TPNDLQAQGVIAGPAVFRRTCAS*AGATLA
Trigger: TGCCAGGGTGGCACCAGCTCAGCTGGCGCATGTCCT...CCTGAACACGGCAGGCCCTGCTATCACACCTTGGGCTTGGAGGTCATTGGGAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000321878.10
ENST00000540241.1
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR TCA 90 bp GATGTGGTAGAGGAAGAAGCGGCCCAGCACCTGGTCCAGTGCACGGTTCATCTTGGCAGGCAGTGCCAGTaGTGGAGTGCGGCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: DVVEEEAAQHLVQCTVHLGRQCQ*WSAASL
Trigger: CAGGCTGGCCGCACTCCATCACTGGCACTGCCTGCC...AAGATGAACCGTGCACTGGACCAGGTGCTGGGCCGCTTCTTCCTCTACCACATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635909.1
ENST00000636657.1
CDS-3UTR TCA 90 bp CGGCCCAGCACCTGGTCCAGTGCACGGTTCATCTTGAGCCCGGCGGGAGCACCCATGCTCACAGCCTGCTaGTGGTTTCTTCACAAAGCG +
Preference number: 4 (lower is better)
Translates to: RPSTWSSARFILSPAGAPMLTAC*WFLHKA
Trigger: CGCTTTGTGAAGAAACCATCAGCAGGCTGTGAGCAT...GGGTGCTCCCGCCGGGCTCAAGATGAACCGTGCACTGGACCAGGTGCTGGGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635909.1
ENST00000636657.1
CDS-3UTR TCA 90 bp CCAGAGAGCCAGGAGGGCAACGCTGATCTCAGGGACCACAAGGGAGATACCAGGCCAGGAGGGCAACGCTaGTCTCAGGGACCACAAGGG +
Preference number: 4 (lower is better)
Translates to: PESQEGNADLRDHKGDTRPGGQR*SQGPQG
Trigger: CCCTTGTGGTCCCTGAGATCAGCGTTGCCCTCCTGG...CCTGGTATCTCCCTTGTGGTCCCTGAGATCAGCGTTGCCCTCCTGGCTCTCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR TCA 90 bp GAAGGCCCAGAGGCAGCATGGAAATGCACTAGATCTGCAGAGGAGGGGGCTGCACCACACAGACGTGCCTaGTGCTGCCCCCAGAGGCCT +
Preference number: 4 (lower is better)
Translates to: EGPEAAWKCTRSAEEGAAPHRRA*CCPQRP
Trigger: AGGCCTCTGGGGGCAGCATCAGGCACGTCTGTGTGG...TGCAGCCCCCTCCTCTGCAGATCTAGTGCATTTCCATGCTGCCTCTGGGCCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR GCA 90 bp TGGACGAATAGGTACGGCTGGGTCAGTGGGCGGGCCCTTGACACTGAGGCTGCTACCTGGGCCAGGAGCTaGTTGACCTGGATGGGGATG +
Preference number: 4 (lower is better)
Translates to: WTNRYGWVSGRALDTEAATWARS*LTWMGM
Trigger: CATCCCCATCCAGGTCAAGCAGCTCCTGGCCCAGGT...AGCAGCCTCAGTGTCAAGGGCCCGCCCACTGACCCAGCCGTACCTATTCGTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000636657.1
CDS-3UTR GCA 90 bp CACAGGGAACACCCGCACCCAGACCGTGCCGTCTGGCAGGCACTTTCGGCCTCAGGAAGAGCACCTCACTaGGTGCTACCGTGTCGAAGA +
Preference number: 4 (lower is better)
Translates to: HREHPHPDRAVWQALSASGRAPH*VLPCRR
Trigger: TCTTCGACACGGTAGCACGCAGTGAGGTGCTCTTCC...TGAGGCCGAAAGTGCCTGCCAGACGGCACGGTCTGGGTGCGGGTGTTCCCTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000636657.1
CDS-3UTR GCA 90 bp CTCCAGAGCATGGAGAAGGTAGAACTGGCTTTGTGGGGCGGTGGCTCTGGCCCGCGCACGTGGAGAGTTTaGTCCCGAGGAAGGACAGGG +
Preference number: 4 (lower is better)
Translates to: LQSMEKVELALWGGGSGPRTWRV*SRGRTG
Trigger: CCCTGTCCTTCCTCGGGAGCAAACTCTCCACGTGCG...CGGGCCAGAGCCACCGCCCCACAAAGCCAGTTCTACCTTCTCCATGCTCTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470411.2
CDS-3UTR GCA 90 bp GAAGGCCCAGAGGCAGCATGGAAATGCACTAGATCTGCAGAGGAGGGGGCTGCAAGGTGCTCCAGCCGGTaGCGGAGCTGTTCGCACGTG +
Preference number: 4 (lower is better)
Translates to: EGPEAAWKCTRSAEEGAARCSSR*RSCSHV
Trigger: CACGTGCGAACAGCTCCGGCACCGGCTGGAGCACCT...TGCAGCCCCCTCCTCTGCAGATCTAGTGCATTTCCATGCTGCCTCTGGGCCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR GCA 90 bp GGAGCACACAGCAGCGTCCACAAAGCACAGGACATGCGCCAGCTGAGCTGGTGCGCACCCATCAGCCACTaGAGCAGATGCTGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: GAHSSVHKAQDMRQLSWCAPISH*SRCWSS
Trigger: GGAGCTCCAGCATCTGCTGCAGTGGCTGATGGGTGC...GCACCAGCTCAGCTGGCGCATGTCCTGTGCTTTGTGGACGCTGCTGTGTGCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321878.10
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR GCA 90 bp GTGCACCACGCGGCTGTAGGGCAGTGGGTTTATCTGCATCAGGAGGCGGAGGGGCAGCACCTGGTCCAGTaGACGGTTCATCTTGAGCCC +
Preference number: 4 (lower is better)
Translates to: VHHAAVGQWVYLHQEAEGQHLVQ*TVHLEP
Trigger: GGGCTCAAGATGAACCGTGCACTGGACCAGGTGCTG...CCCCTCCGCCTCCTGATGCAGATAAACCCACTGCCCTACAGCCGCGTGGTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000443147.5
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR GCA 90 bp GTGCACCACGCGGCTGTAGGGCAGTGGGTTTATCTGCATCAGGAGGCGGAGGGGCAGTTCCCTCAGTCCTaGTTGTCCCCTCTCTGCCTC +
Preference number: 4 (lower is better)
Translates to: VHHAAVGQWVYLHQEAEGQFPQS*LSPLCL
Trigger: GAGGCAGAGAGGGGACAAGCAGGACTGAGGGAACTG...CCCCTCCGCCTCCTGATGCAGATAAACCCACTGCCCTACAGCCGCGTGGTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000443147.5
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR GCA 90 bp GGACGAATAGGTACGGCTGGGTCAGTGGGCGGGCCCTTGACACTGAGGCTGCTCCAGTTCCCTCAGTCCTaGTTGTCCCCTCTCTGCCTC +
Preference number: 4 (lower is better)
Translates to: GRIGTAGSVGGPLTLRLLQFPQS*LSPLCL
Trigger: GAGGCAGAGAGGGGACAAGCAGGACTGAGGGAACTG...GAGCAGCCTCAGTGTCAAGGGCCCGCCCACTGACCCAGCCGTACCTATTCGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp AGAGCAGATGGCTGGCTGTGGCCGTGTGGTGGTGCCAGGCGAGCCAGCAGTTCCTGTGATAGCAGGGCCTaGCGTGTTCAGGAGCACACA +
Preference number: 4 (lower is better)
Translates to: RADGWLWPCGGARRASSSCDSRA*RVQEHT
Trigger: TGTGTGCTCCTGAACACGGCAGGCCCTGCTATCACA...GGAACTGCTGGCTCGCCTGGCACCACCACACGGCCACAGCCAGCCATCTGCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000321878.10
ENST00000540241.1
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR GCA 90 bp GCTGTGGCCGTGTGGTGGTGCCAGGCGAGCCAGCAGTTCCCTCAGTCCTGCTTGTGTGATAGCAGGGCCTaGCGTGTTCAGGAGCACACA +
Preference number: 4 (lower is better)
Translates to: AVAVWWCQASQQFPQSCLCDSRA*RVQEHT
Trigger: TGTGTGCTCCTGAACACGGCAGGCCCTGCTATCACA...CAAGCAGGACTGAGGGAACTGCTGGCTCGCCTGGCACCACCACACGGCCACAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR GCA 90 bp GAGTGCGGCCAGCCTGGCTGGCCACCCCCACATCTGCTCACTCCCAATGACCTCTGTGATAGCAGGGCCTaGCGTGTTCAGGAGCACACA +
Preference number: 4 (lower is better)
Translates to: ECGQPGWPPPHLLTPNDLCDSRA*RVQEHT
Trigger: TGTGTGCTCCTGAACACGGCAGGCCCTGCTATCACA...GAGGTCATTGGGAGTGAGCAGATGTGGGGGTGGCCAGCCAGGCTGGCCGCACTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000321878.10
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR GCA 90 bp AGCCCAAGGTGTGATAGCAGGGCCTGCCGTGTTCAGGAGCACACAGCAGCGTCCGGCCACCCCCACATCTaGTCACTCCCAATGACCTCC +
Preference number: 4 (lower is better)
Translates to: SPRCDSRACRVQEHTAASGHPHI*SLPMTS
Trigger: GGAGGTCATTGGGAGTGAGCAGATGTGGGGGTGGCC...GGACGCTGCTGTGTGCTCCTGAACACGGCAGGCCCTGCTATCACACCTTGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000321878.10
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR GCA 90 bp GGAACAGGAGTCCACGCGCTGGCGCAGAACGTTCCACTTCTTCCCCCGGAACAGGGCCACCCCCACATCTaGTCACTCCCAATGACCTCC +
Preference number: 4 (lower is better)
Translates to: GTGVHALAQNVPLLPPEQGHPHI*SLPMTS
Trigger: GGAGGTCATTGGGAGTGAGCAGATGTGGGGGTGGCC...CTGTTCCGGGGGAAGAAGTGGAACGTTCTGCGCCAGCGCGTGGACTCCTGTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp AGGTGTGATAGCAGGGCCTGCCGTGTTCAGGAGCACACAGCAGCGTCCACAAAGGTGCCAGTGATGGAGTaGGGCCAGCCTGGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: RCDSRACRVQEHTAASTKVPVME*GQPGWP
Trigger: TGGCCAGCCAGGCTGGCCGCACTCCATCACTGGCAC...CTTTGTGGACGCTGCTGTGTGCTCCTGAACACGGCAGGCCCTGCTATCACACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321878.10
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR GCA 90 bp CAAGGTGTGATAGCAGGGCCTGCCGTGTTCAGGAGCACACAGCAGCGTCCACAAGTGCCAGTGATGGAGTaGGGCCAGCCTGGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: QGVIAGPAVFRSTQQRPQVPVME*GQPGWP
Trigger: TGGCCAGCCAGGCTGGCCGCACTCCATCACTGGCAC...TTGTGGACGCTGCTGTGTGCTCCTGAACACGGCAGGCCCTGCTATCACACCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321878.10
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR GCA 90 bp GAGGAAGAGCAGGATGGTGAAGAGCAGAGTCCCGATGAACAGCTGGTCCAGGTCCCCTCCACCTGGGGCTaGTGTGGTGGACGGACCCTC +
Preference number: 4 (lower is better)
Translates to: EEEQDGEEQSPDEQLVQVPSTWG*CGGRTL
Trigger: GAGGGTCCGTCCACCACAGCAGCCCCAGGTGGAGGG...GACCTGGACCAGCTGTTCATCGGGACTCTGCTCTTCACCATCCTGCTCTTCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp CTCCAGGGAACATCCGCAAATAAACCCCGTGTGGTTCAGGGAGTGAGGGCCCGGCCCCCAGATGCAGGGTaGTGTTCGGCTGAGGGAGCT +
Preference number: 4 (lower is better)
Translates to: LQGTSANKPRVVQGVRARPPDAG*CSAEGA
Trigger: AGCTCCCTCAGCCGAACAGCACCCTGCATCTGGGGG...CCGGGCCCTCACTCCCTGAACCACACGGGGTTTATTTGCGGATGTTCCCTGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp GCTGGGGAGGCGGTAGGTGTGCACCACGCGGCTGTAGGGCAGTGGGTTTATCTGACGGGGGTCAGCGACTaGTTCAATCCCCCAGATGCA +
Preference number: 4 (lower is better)
Translates to: AGEAVGVHHAAVGQWVYLTGVSD*FNPPDA
Trigger: TGCATCTGGGGGATTGAAGCAGTCGCTGACCCCCGT...CAGATAAACCCACTGCCCTACAGCCGCGTGGTGCACACCTACCGCCTCCCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp AATGACCTCCAAGCCCAAGGTGTGATAGCAGGGCCTGCCGTGTTCAGGAGCACAGGCCTGCCGGCCTCGTaGCGGAGGACACGGAACTTC +
Preference number: 4 (lower is better)
Translates to: NDLQAQGVIAGPAVFRSTGLPAS*RRTRNF
Trigger: GAAGTTCCGTGTCCTCCGGCACGAGGCCGGCAGGCC...TGTGCTCCTGAACACGGCAGGCCCTGCTATCACACCTTGGGCTTGGAGGTCATT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000321878.10
ENST00000540241.1
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR GCA 90 bp GCACTTTTGCAAAAGGGAGGTCTAGGACAAAGTAGGCCGGTGGCAGGTGCGGACTGCAGAGGAGGGGGCTaGACCCGGCTGGAAACGGGG +
Preference number: 4 (lower is better)
Translates to: ALLQKGGLGQSRPVAGADCRGGG*TRLETG
Trigger: CCCCGTTTCCAGCCGGGTGCAGCCCCCTCCTCTGCA...GTCCGCACCTGCCACCGGCCTACTTTGTCCTAGACCTCCCTTTTGCAAAAGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR CCA 90 bp CTGGCCACAAGCAGGCCCAGTGCACACCTGCAGCCCACACAAGACCCACCCAGTAAGATGAGCATGACCTaGTCCTCACCAGGGGCACCG +
Preference number: 4 (lower is better)
Translates to: LATSRPSAHLQPTQDPPSKMSMT*SSPGAP
Trigger: CGGTGCCCCTGGTGAGGACCAGGTCATGCTCATCTT...ACTGGGTGGGTCTTGTGTGGGCTGCAGGTGTGCACTGGGCCTGCTTGTGGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR CCA 90 bp GCACTTTTGCAAAAGGGAGGTCTAGGACAAAGTAGGCCGGTGGCAGGTGCGGACGCTCCGCGAGGATGCTaGCCTCCACGCCCTCCGACT +
Preference number: 4 (lower is better)
Translates to: ALLQKGGLGQSRPVAGADAPRGC*PPRPPT
Trigger: AGTCGGAGGGCGTGGAGGCCAGCATCCTCGCGGAGC...GTCCGCACCTGCCACCGGCCTACTTTGTCCTAGACCTCCCTTTTGCAAAAGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR CCA 90 bp AGAGCCAGGAGGGCAACGCTGATCTCAGGGACCACAAGGGAGATACCAGGACGCCCAACAGCAGGCAAATaGGTCCCGAGGCTCGCCTGG +
Preference number: 4 (lower is better)
Translates to: RARRATLISGTTREIPGRPTAGK*VPRLAW
Trigger: CCAGGCGAGCCTCGGGACCCATTTGCCTGCTGTTGG...GCGTCCTGGTATCTCCCTTGTGGTCCCTGAGATCAGCGTTGCCCTCCTGGCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR CCA 90 bp GAGTTGATGAGGTCCACGAGCAGATGGATCAGGCCCTGCACGGCGACCACCAGGCAGAGGCCACCGTGTTaGCCTTCCTCATCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: ELMRSTSRWIRPCTATTRQRPPC*PSSSAG
Trigger: CCCAGCTGATGAGGAAGGCCAACACGGTGGCCTCTG...CCTGGTGGTCGCCGTGCAGGGCCTGATCCATCTGCTCGTGGACCTCATCAACTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000635909.1
ENST00000636657.1
ENST00000637468.1
CDS-3UTR CCA 90 bp AGGGAGTTGATGAGGTCCACGAGCAGATGGATCAGGCCCTGCACGGCGACCACCCAGAGGCCACCGTGTTaGCCTTCCTCATCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: RELMRSTSRWIRPCTATTQRPPC*PSSSAG
Trigger: CCCAGCTGATGAGGAAGGCCAACACGGTGGCCTCTG...GGTGGTCGCCGTGCAGGGCCTGATCCATCTGCTCGTGGACCTCATCAACTCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000635909.1
ENST00000636657.1
ENST00000637468.1
CDS-3UTR CCA 90 bp GGTTTATCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGAGGACACAGTGAGGACAGGCCATaGATCTTCAGGCAGTACAGC +
Preference number: 4 (lower is better)
Translates to: GLSASGGGGACRPRAGGHSEDRP*IFRQYS
Trigger: GCTGTACTGCCTGAAGATCCATGGCCTGTCCTCACT...GTGTCCTCCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGATAAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443147.5
ENST00000635205.1
ENST00000635909.1
ENST00000636657.1
ENST00000637468.1
CDS-3UTR CCA 90 bp GTCCACGAGCAGATGGATCAGGCCCTGCACGGCGACCACCAGGAGCCGGAGCTGAGTGAGGACAGGCCATaGATCTTCAGGCAGTACAGC +
Preference number: 4 (lower is better)
Translates to: VHEQMDQALHGDHQEPELSEDRP*IFRQYS
Trigger: GCTGTACTGCCTGAAGATCCATGGCCTGTCCTCACT...CAGCTCCGGCTCCTGGTGGTCGCCGTGCAGGGCCTGATCCATCTGCTCGTGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637468.1
CDS-3UTR CCA 90 bp ACACAGCAGCGTCCACAAAGCACAGGACATGCGCCAGCTGAGCTGGTGCCACCCCAGGAGTCCACGCGCTaGCGCAGAACGTTCCACTTC +
Preference number: 4 (lower is better)
Translates to: TQQRPQSTGHAPAELVPPQESTR*RRTFHF
Trigger: GAAGTGGAACGTTCTGCGCCAGCGCGTGGACTCCTG...GGGTGGCACCAGCTCAGCTGGCGCATGTCCTGTGCTTTGTGGACGCTGCTGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000321878.10
ENST00000540241.1
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR CCA 90 bp AGCACACAGCAGCGTCCACAAAGCACAGGACATGCGCCAGCTGAGCTGGTGCCAAGGTCCACGAGCAGATaGATCAGGCCCTGCACGGCG +
Preference number: 4 (lower is better)
Translates to: STQQRPQSTGHAPAELVPRSTSR*IRPCTA
Trigger: CGCCGTGCAGGGCCTGATCCATCTGCTCGTGGACCT...TGGCACCAGCTCAGCTGGCGCATGTCCTGTGCTTTGTGGACGCTGCTGTGTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321878.10
ENST00000540241.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR CCA 90 bp GGTGTGATAGCAGGGCCTGCCGTGTTCAGGAGCACACAGCAGCGTCCACAAAGCAGGTCCACGAGCAGATaGATCAGGCCCTGCACGGCG +
Preference number: 4 (lower is better)
Translates to: GVIAGPAVFRSTQQRPQSRSTSR*IRPCTA
Trigger: CGCCGTGCAGGGCCTGATCCATCTGCTCGTGGACCT...GCTTTGTGGACGCTGCTGTGTGCTCCTGAACACGGCAGGCCCTGCTATCACACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321878.10
ENST00000540241.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR CCA 90 bp GTGATAGCAGGGCCTGCCGTGTTCAGGAGCACACAGCAGCGTCCACAAAGCACAGGTGACCGCAGCAGGTaGGAAGCGGGTCCCAAGGCA +
Preference number: 4 (lower is better)
Translates to: VIAGPAVFRSTQQRPQSTGDRSR*EAGPKA
Trigger: TGCCTTGGGACCCGCTTCCCACCTGCTGCGGTCACC...TGTGCTTTGTGGACGCTGCTGTGTGCTCCTGAACACGGCAGGCCCTGCTATCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321878.10
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR CCA 90 bp AGGTGTGATAGCAGGGCCTGCCGTGTTCAGGAGCACACAGCAGCGTCCACAAAGGGTGACCGCAGCAGGTaGGAAGCGGGTCCCAAGGCA +
Preference number: 4 (lower is better)
Translates to: RCDSRACRVQEHTAASTKGDRSR*EAGPKA
Trigger: TGCCTTGGGACCCGCTTCCCACCTGCTGCGGTCACC...CTTTGTGGACGCTGCTGTGTGCTCCTGAACACGGCAGGCCCTGCTATCACACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321878.10
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR CCA 90 bp ACACAGCAGCGTCCACAAAGCACAGGACATGCGCCAGCTGAGCTGGTGCCACCCCATGGGGCAGTGCTCTaGACACCTGGGGTTGCTGTG +
Preference number: 4 (lower is better)
Translates to: TQQRPQSTGHAPAELVPPHGAVL*TPGVAV
Trigger: CACAGCAACCCCAGGTGTCCAGAGCACTGCCCCATG...GGGTGGCACCAGCTCAGCTGGCGCATGTCCTGTGCTTTGTGGACGCTGCTGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000321878.10
ENST00000635205.1
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp GAGTTGATGAGGTCCACGAGCAGATGGATCAGGCCCTGCACGGCGACCACCAGGCATGGGGCAGTGCTCTaGACACCTGGGGTTGCTGTG +
Preference number: 4 (lower is better)
Translates to: ELMRSTSRWIRPCTATTRHGAVL*TPGVAV
Trigger: CACAGCAACCCCAGGTGTCCAGAGCACTGCCCCATG...CCTGGTGGTCGCCGTGCAGGGCCTGATCCATCTGCTCGTGGACCTCATCAACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp ACGGGGGTCAGCGACTGCTTCAATCCCCCAGATGCAGGGTGCTGTTCGGCTGAGTACACAGGGTGGGCATaGGGCAGTGCTCTGGACACC +
Preference number: 4 (lower is better)
Translates to: TGVSDCFNPPDAGCCSAEYTGWA*GSALDT
Trigger: GGTGTCCAGAGCACTGCCCCATGCCCACCCTGTGTA...CTCAGCCGAACAGCACCCTGCATCTGGGGGATTGAAGCAGTCGCTGACCCCCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp AACACCCGCACCCAGACCGTGCCGTCTGGCAGGCACTTTCGGCCTCAGTGCCACGAAGGGAGACAGATTTaGCCGCAGGACCTGCTGCTA +
Preference number: 4 (lower is better)
Translates to: NTRTQTVPSGRHFRPQCHEGRQI*PQDLLL
Trigger: TAGCAGCAGGTCCTGCGGCCAAATCTGTCTCCCTTC...GTGGCACTGAGGCCGAAAGTGCCTGCCAGACGGCACGGTCTGGGTGCGGGTGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp TGGCTGTGGCCGTGTGGTGGTGCCAGGCGAGCCAGCAGTTCCCTCAGTCCTGCTGAAGGGAGACAGATTTaGCCGCAGGACCTGCTGCTA +
Preference number: 4 (lower is better)
Translates to: WLWPCGGARRASSSLSPAEGRQI*PQDLLL
Trigger: TAGCAGCAGGTCCTGCGGCCAAATCTGTCTCCCTTC...AGCAGGACTGAGGGAACTGCTGGCTCGCCTGGCACCACCACACGGCCACAGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp ACACAGCAGCGTCCACAAAGCACAGGACATGCGCCAGCTGAGCTGGTGCCACCCGGCTTCCTCCTTCCCTaGGAGGCCCATGAAGGGAGA +
Preference number: 4 (lower is better)
Translates to: TQQRPQSTGHAPAELVPPGFLLP*EAHEGR
Trigger: TCTCCCTTCATGGGCCTCCCAGGGAAGGAGGAAGCC...GGGTGGCACCAGCTCAGCTGGCGCATGTCCTGTGCTTTGTGGACGCTGCTGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp CACAGGGAACACCCGCACCCAGACCGTGCCGTCTGGCAGGCACTTTCGGCCTCAGCGGCTGTAGGGCAGTaGGTTTATCTGCATCAGGAG +
Preference number: 4 (lower is better)
Translates to: HREHPHPDRAVWQALSASAAVGQ*VYLHQE
Trigger: CTCCTGATGCAGATAAACCCACTGCCCTACAGCCGC...TGAGGCCGAAAGTGCCTGCCAGACGGCACGGTCTGGGTGCGGGTGTTCCCTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp ATGGCTGGCTGTGGCCGTGTGGTGGTGCCAGGCGAGCCAGCAGTTCCCTCAGTCGCGGCTGTAGGGCAGTaGGTTTATCTGCATCAGGAG +
Preference number: 4 (lower is better)
Translates to: MAGCGRVVVPGEPAVPSVAAVGQ*VYLHQE
Trigger: CTCCTGATGCAGATAAACCCACTGCCCTACAGCCGC...GACTGAGGGAACTGCTGGCTCGCCTGGCACCACCACACGGCCACAGCCAGCCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000443147.5
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR CCA 90 bp CCAGAGAGCCAGGAGGGCAACGCTGATCTCAGGGACCACAAGGGAGATACCAGGAGGCCCCAGCGCCCCTaGAGTTCCTGCTTCTGGTTC +
Preference number: 4 (lower is better)
Translates to: PESQEGNADLRDHKGDTRRPQRP*SSCFWF
Trigger: GAACCAGAAGCAGGAACTCCAGGGGCGCTGGGGCCT...CCTGGTATCTCCCTTGTGGTCCCTGAGATCAGCGTTGCCCTCCTGGCTCTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR CCA 90 bp CCTCCACAGAGGCCCGAGGGTGGGCCAAAGAGTCAGGTACCACCCCCAGCAGGAAGGGAAGGTGGGAGATaGGAGACAAGCTGTGCCTCT +
Preference number: 4 (lower is better)
Translates to: PPQRPEGGPKSQVPPPAGREGGR*ETSCAS
Trigger: AGAGGCACAGCTTGTCTCCCATCTCCCACCTTCCCT...TCCTGCTGGGGGTGGTACCTGACTCTTTGGCCCACCCTCGGGCCTCTGTGGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR CCA 90 bp AGAGCCAGGAGGGCAACGCTGATCTCAGGGACCACAAGGGAGATACCAGGACGCTCCTTCCTTCTGGGCTaGAGCTCCCTGCACCCCCAC +
Preference number: 4 (lower is better)
Translates to: RARRATLISGTTREIPGRSFLLG*SSLHPH
Trigger: GTGGGGGTGCAGGGAGCTCCAGCCCAGAAGGAAGGA...GCGTCCTGGTATCTCCCTTGTGGTCCCTGAGATCAGCGTTGCCCTCCTGGCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR CCA 90 bp CCAGAGAGCCAGGAGGGCAACGCTGATCTCAGGGACCACAAGGGAGATACCAGGTCCTTCCTTCTGGGCTaGAGCTCCCTGCACCCCCAC +
Preference number: 4 (lower is better)
Translates to: PESQEGNADLRDHKGDTRSFLLG*SSLHPH
Trigger: GTGGGGGTGCAGGGAGCTCCAGCCCAGAAGGAAGGA...CCTGGTATCTCCCTTGTGGTCCCTGAGATCAGCGTTGCCCTCCTGGCTCTCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR CCA 90 bp CTCCAGAGCATGGAGAAGGTAGAACTGGCTTTGTGGGGCGGTGGCTCTGGCCCGCCACACCTCATCAGCTaGGCAGGGTTCTCCGCCTTC +
Preference number: 4 (lower is better)
Translates to: LQSMEKVELALWGGGSGPPHLIS*AGFSAF
Trigger: GAAGGCGGAGAACCCTGCCCAGCTGATGAGGTGTGG...CGGGCCAGAGCCACCGCCCCACAAAGCCAGTTCTACCTTCTCCATGCTCTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470411.2
CDS-3UTR CCA 90 bp GTTCAGGGGAGGGCCGTGTCTCCAGAGCATGGAGAAGGTAGAACTGGCTTTGTGCCGTGTTGGCCTTCCTaGAAGGGAGGTCCGGCCCGG +
Preference number: 4 (lower is better)
Translates to: VQGRAVSPEHGEGRTGFVPCWPS*KGGPAR
Trigger: CCGGGCCGGACCTCCCTTCCAGGAAGGCCAACACGG...CACAAAGCCAGTTCTACCTTCTCCATGCTCTGGAGACACGGCCCTCCCCTGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470411.2
CDS-3UTR TCA 90 bp CCTGGCGATGCTCACAGCCTGCTGATGGTTTCTTCACAAAGCGACCTCTCCAGGGTGCACGGTTCATCTTaGGCCCGGCGGGAGCACCCA +
Preference number: 4 (lower is better)
Translates to: PGDAHSLLMVSSQSDLSRVHGSS*ARREHP
Trigger: TGGGTGCTCCCGCCGGGCTCAAGATGAACCGTGCAC...CCTGGAGAGGTCGCTTTGTGAAGAAACCATCAGCAGGCTGTGAGCATCGCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR TCA 90 bp GTGGTGCCAGGCGAGCCAGCAGTTCCCTCAGTCCTGCTTGTCCCCTCTCTGCCTGAACAGACGCCACAGTaGGGACAGGCCATGGATCTT +
Preference number: 4 (lower is better)
Translates to: VVPGEPAVPSVLLVPSLPEQTPQ*GQAMDL
Trigger: AAGATCCATGGCCTGTCCTCACTGTGGCGTCTGTTC...AGGCAGAGAGGGGACAAGCAGGACTGAGGGAACTGCTGGCTCGCCTGGCACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000443147.5
ENST00000635205.1
ENST00000635909.1
ENST00000636657.1
CDS-3UTR TCA 90 bp GTGCACCACGCGGCTGTAGGGCAGTGGGTTTATCTGCATCAGGAGGCGGAGGGGAGAGCAGAGTCCCGATaGACAGCTGGTCCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: VHHAAVGQWVYLHQEAEGRAESR*TAGPGH
Trigger: ATGACCTGGACCAGCTGTTCATCGGGACTCTGCTCT...CCCCTCCGCCTCCTGATGCAGATAAACCCACTGCCCTACAGCCGCGTGGTGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443147.5
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR TCA 90 bp CATGGGGCAGTGCTCTGGACACCTGGGGTTGCTGTGCTCGCCACCATGGTGACCAGAGCAGAGTCCCGATaGACAGCTGGTCCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: HGAVLWTPGVAVLATMVTRAESR*TAGPGH
Trigger: ATGACCTGGACCAGCTGTTCATCGGGACTCTGCTCT...GGTCACCATGGTGGCGAGCACAGCAACCCCAGGTGTCCAGAGCACTGCCCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321878.10
ENST00000635205.1
ENST00000635909.1
ENST00000636657.1
CDS-3UTR TCA 90 bp CGCGCTGGCGCAGAACGTTCCACTTCTTCCCCCGGAACAGACGCCACAGTGAGGTCTGCTCACTCCCAATaGCCTCCAAGCCCAAGGTGT +
Preference number: 4 (lower is better)
Translates to: RAGAERSTSSPGTDATVRSAHSQ*PPSPRC
Trigger: ACACCTTGGGCTTGGAGGTCATTGGGAGTGAGCAGA...CCTCACTGTGGCGTCTGTTCCGGGGGAAGAAGTGGAACGTTCTGCGCCAGCGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp GTAGAGGAAGAAGCGGCCCAGCACCTGGTCCAGTGCACGGTTCATCTTGAGCCCGGGATGAAGGGAAAGTaGAGGACCGCCAGGACCACG +
Preference number: 4 (lower is better)
Translates to: VEEEAAQHLVQCTVHLEPGMKGK*RTARTT
Trigger: CGTGGTCCTGGCGGTCCTGCACTTTCCCTTCATCCC...GGGCTCAAGATGAACCGTGCACTGGACCAGGTGCTGGGCCGCTTCTTCCTCTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636657.1
CDS-3UTR GCA 90 bp CCCCAGAGAGCCAGGAGGGCAACGCTGATCTCAGGGACCACAAGGGAGATACCAACCTGGGCCAGGAGCTaGTTGACCTGGATGGGGATG +
Preference number: 4 (lower is better)
Translates to: PQRARRATLISGTTREIPTWARS*LTWMGM
Trigger: CATCCCCATCCAGGTCAAGCAGCTCCTGGCCCAGGT...TGGTATCTCCCTTGTGGTCCCTGAGATCAGCGTTGCCCTCCTGGCTCTCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR GCA 90 bp CCGTGGACGAATAGGTACGGCTGGGTCAGTGGGCGGGCCCTTGACACTGAGGCTCATCAAAGCGGTCACTaGGGAAGAGCACCTCACTGC +
Preference number: 4 (lower is better)
Translates to: PWTNRYGWVSGRALDTEAHQSGH*GRAPHC
Trigger: GCAGTGAGGTGCTCTTCCGCAGTGACCGCTTTGATG...AGCCTCAGTGTCAAGGGCCCGCCCACTGACCCAGCCGTACCTATTCGTCCACGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000636657.1
CDS-3UTR GCA 90 bp CTGGCCACAAGCAGGCCCAGTGCACACCTGCAGCCCACACAAGACCCACCCAGTCATCAAAGCGGTCACTaGGGAAGAGCACCTCACTGC +
Preference number: 4 (lower is better)
Translates to: LATSRPSAHLQPTQDPPSHQSGH*GRAPHC
Trigger: GCAGTGAGGTGCTCTTCCGCAGTGACCGCTTTGATG...ACTGGGTGGGTCTTGTGTGGGCTGCAGGTGTGCACTGGGCCTGCTTGTGGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR GCA 90 bp TGGTGCCAGGCGAGCCAGCAGTTCCCTCAGTCCTGCTTGTCCCCTCTCTGCCTCCATCAAAGCGGTCACTaGGGAAGAGCACCTCACTGC +
Preference number: 4 (lower is better)
Translates to: WCQASQQFPQSCLSPLCLHQSGH*GRAPHC
Trigger: GCAGTGAGGTGCTCTTCCGCAGTGACCGCTTTGATG...GAGGCAGAGAGGGGACAAGCAGGACTGAGGGAACTGCTGGCTCGCCTGGCACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443147.5
ENST00000636657.1
CDS-3UTR GCA 90 bp CCAGAGAGCCAGGAGGGCAACGCTGATCTCAGGGACCACAAGGGAGATACCAGGAAGATTAGCGTGAGGTaGTCCAGCCGGTGCCGGAGC +
Preference number: 4 (lower is better)
Translates to: PESQEGNADLRDHKGDTRKISVR*SSRCRS
Trigger: GCTCCGGCACCGGCTGGAGCACCTCACGCTAATCTT...CCTGGTATCTCCCTTGTGGTCCCTGAGATCAGCGTTGCCCTCCTGGCTCTCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR GCA 90 bp AGAACGTTCCACTTCTTCCCCCGGAACAGACGCCACAGTGAGGACAGGCCATGGAGCCACTGCAGCAGATaGTGGAGCTCCTCGGCCACG +
Preference number: 4 (lower is better)
Translates to: RTFHFFPRNRRHSEDRPWSHCSR*WSSSAT
Trigger: CGTGGCCGAGGAGCTCCAGCATCTGCTGCAGTGGCT...CCATGGCCTGTCCTCACTGTGGCGTCTGTTCCGGGGGAAGAAGTGGAACGTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000635909.1
ENST00000636657.1
ENST00000638143.1
CDS-3UTR GCA 90 bp TGGACGAATAGGTACGGCTGGGTCAGTGGGCGGGCCCTTGACACTGAGGCTGCTCAGCACCTGGTCCAGTaGACGGTTCATCTTGAGCCC +
Preference number: 4 (lower is better)
Translates to: WTNRYGWVSGRALDTEAAQHLVQ*TVHLEP
Trigger: GGGCTCAAGATGAACCGTGCACTGGACCAGGTGCTG...AGCAGCCTCAGTGTCAAGGGCCCGCCCACTGACCCAGCCGTACCTATTCGTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp GTGATAGCAGGGCCTGCCGTGTTCAGGAGCACACAGCAGCGTCCACAAAGCACACGCCAGCTGAGCTGGTaGCACCCTGGCAGAGCAGAT +
Preference number: 4 (lower is better)
Translates to: VIAGPAVFRSTQQRPQSTRQLSW*HPGRAD
Trigger: ATCTGCTCTGCCAGGGTGGCACCAGCTCAGCTGGCG...TGTGCTTTGTGGACGCTGCTGTGTGCTCCTGAACACGGCAGGCCCTGCTATCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000321878.10
ENST00000540241.1
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR GCA 90 bp ATGGAGTGCGGCCAGCCTGGCTGGCCACCCCCACATCTGCTCACTCCCAATGACTGTGATAGCAGGGCCTaGCGTGTTCAGGAGCACACA +
Preference number: 4 (lower is better)
Translates to: MECGQPGWPPPHLLTPNDCDSRA*RVQEHT
Trigger: TGTGTGCTCCTGAACACGGCAGGCCCTGCTATCACA...GTCATTGGGAGTGAGCAGATGTGGGGGTGGCCAGCCAGGCTGGCCGCACTCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000321878.10
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR GCA 90 bp GGCCGGCAGAGCCGAAGACCCAGTGAGTACAGCGGCAGGGAGTTGATGAGGTCCTGTGATAGCAGGGCCTaGCGTGTTCAGGAGCACACA +
Preference number: 4 (lower is better)
Translates to: GRQSRRPSEYSGRELMRSCDSRA*RVQEHT
Trigger: TGTGTGCTCCTGAACACGGCAGGCCCTGCTATCACA...GGACCTCATCAACTCCCTGCCGCTGTACTCACTGGGTCTTCGGCTCTGCCGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR GCA 90 bp GGTGTGATAGCAGGGCCTGCCGTGTTCAGGAGCACACAGCAGCGTCCACAAAGCGGCCACCCCCACATCTaGTCACTCCCAATGACCTCC +
Preference number: 4 (lower is better)
Translates to: GVIAGPAVFRSTQQRPQSGHPHI*SLPMTS
Trigger: GGAGGTCATTGGGAGTGAGCAGATGTGGGGGTGGCC...GCTTTGTGGACGCTGCTGTGTGCTCCTGAACACGGCAGGCCCTGCTATCACACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000321878.10
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR GCA 90 bp ACGGGGGTCAGCGACTGCTTCAATCCCCCAGATGCAGGGTGCTGTTCGGCTGAGACGGGGGTCAGCGACTaGTTCAATCCCCCAGATGCA +
Preference number: 4 (lower is better)
Translates to: TGVSDCFNPPDAGCCSAETGVSD*FNPPDA
Trigger: TGCATCTGGGGGATTGAAGCAGTCGCTGACCCCCGT...CTCAGCCGAACAGCACCCTGCATCTGGGGGATTGAAGCAGTCGCTGACCCCCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp GAAGGCCCAGAGGCAGCATGGAAATGCACTAGATCTGCAGAGGAGGGGGCTGCACGCCCCTGGAGTTCCTaGTTCTGGTTCAGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: EGPEAAWKCTRSAEEGAARPWSS*FWFRGG
Trigger: CCCTCCCCTGAACCAGAAGCAGGAACTCCAGGGGCG...TGCAGCCCCCTCCTCTGCAGATCTAGTGCATTTCCATGCTGCCTCTGGGCCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR GCA 90 bp GAAGGCCCAGAGGCAGCATGGAAATGCACTAGATCTGCAGAGGAGGGGGCTGCAAAGTCCCAGCTGGGCTaGACATGGGCCTCCCTGGAC +
Preference number: 4 (lower is better)
Translates to: EGPEAAWKCTRSAEEGAAKSQLG*TWASLD
Trigger: GTCCAGGGAGGCCCATGTGCAGCCCAGCTGGGACTT...TGCAGCCCCCTCCTCTGCAGATCTAGTGCATTTCCATGCTGCCTCTGGGCCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR CCA 90 bp ACGGGGGTCAGCGACTGCTTCAATCCCCCAGATGCAGGGTGCTGTTCGGCTGAGAAGATGAGCATGACCTaGTCCTCACCAGGGGCACCG +
Preference number: 4 (lower is better)
Translates to: TGVSDCFNPPDAGCCSAEKMSMT*SSPGAP
Trigger: CGGTGCCCCTGGTGAGGACCAGGTCATGCTCATCTT...CTCAGCCGAACAGCACCCTGCATCTGGGGGATTGAAGCAGTCGCTGACCCCCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000321878.10
CDS-3UTR CCA 90 bp TGGGGAGGCGGTAGGTGTGCACCACGCGGCTGTAGGGCAGTGGGTTTATCTGCAGGAGCTGTTCGCACGTaGAGAGTTTGCTCCCGAGGA +
Preference number: 4 (lower is better)
Translates to: WGGGRCAPRGCRAVGLSAGAVRT*RVCSRG
Trigger: TCCTCGGGAGCAAACTCTCCACGTGCGAACAGCTCC...TGCAGATAAACCCACTGCCCTACAGCCGCGTGGTGCACACCTACCGCCTCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000443147.5
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR CCA 90 bp CTCCAGGGAACATCCGCAAATAAACCCCGTGTGGTTCAGGGAGTGAGGGCCCGGGCCTTCCTCATCAGCTaGGCAGGGTTCTCCGCCTTC +
Preference number: 4 (lower is better)
Translates to: LQGTSANKPRVVQGVRARAFLIS*AGFSAF
Trigger: GAAGGCGGAGAACCCTGCCCAGCTGATGAGGAAGGC...CCGGGCCCTCACTCCCTGAACCACACGGGGTTTATTTGCGGATGTTCCCTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp AACAGGAGTCCACGCGCTGGCGCAGAACGTTCCACTTCTTCCCCCGGAACAGACGCCTTCCTCATCAGCTaGGCAGGGTTCTCCGCCTTC +
Preference number: 4 (lower is better)
Translates to: NRSPRAGAERSTSSPGTDAFLIS*AGFSAF
Trigger: GAAGGCGGAGAACCCTGCCCAGCTGATGAGGAAGGC...GTCTGTTCCGGGGGAAGAAGTGGAACGTTCTGCGCCAGCGCGTGGACTCCTGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp AGAGCCAGGAGGGCAACGCTGATCTCAGGGACCACAAGGGAGATACCAGGACGCCAGAGGCCACCGTGTTaGCCTTCCTCATCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: RARRATLISGTTREIPGRQRPPC*PSSSAG
Trigger: CCCAGCTGATGAGGAAGGCCAACACGGTGGCCTCTG...GCGTCCTGGTATCTCCCTTGTGGTCCCTGAGATCAGCGTTGCCCTCCTGGCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422307.6
CDS-3UTR CCA 90 bp GTAGAGGAAGAAGCGGCCCAGCACCTGGTCCAGTGCACGGTTCATCTTGAGCCCATGCGGCTTCTCCCGTaGAGCCAGGACAGCAGCATG +
Preference number: 4 (lower is better)
Translates to: VEEEAAQHLVQCTVHLEPMRLLP*SQDSSM
Trigger: CATGCTGCTGTCCTGGCTCCACGGGAGAAGCCGCAT...GGGCTCAAGATGAACCGTGCACTGGACCAGGTGCTGGGCCGCTTCTTCCTCTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000635909.1
ENST00000636657.1
ENST00000638143.1
CDS-3UTR CCA 90 bp ACTCCCAATGACCTCCAAGCCCAAGGTGTGATAGCAGGGCCTGCCGTGTTCAGGCACTGCAGCAGATGCTaGAGCTCCTCGGCCACGTGG +
Preference number: 4 (lower is better)
Translates to: TPNDLQAQGVIAGPAVFRHCSRC*SSSATW
Trigger: CCACGTGGCCGAGGAGCTCCAGCATCTGCTGCAGTG...CCTGAACACGGCAGGCCCTGCTATCACACCTTGGGCTTGGAGGTCATTGGGAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321878.10
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR CCA 90 bp GTAGGTGTGCACCACGCGGCTGTAGGGCAGTGGGTTTATCTGCATCAGGAGGCGAAGCGGCCCAGCACCTaGTCCAGTGCACGGTTCATC +
Preference number: 4 (lower is better)
Translates to: VGVHHAAVGQWVYLHQEAKRPST*SSARFI
Trigger: GATGAACCGTGCACTGGACCAGGTGCTGGGCCGCTT...CGCCTCCTGATGCAGATAAACCCACTGCCCTACAGCCGCGTGGTGCACACCTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000443147.5
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR CCA 90 bp GTAGAGGAAGAAGCGGCCCAGCACCTGGTCCAGTGCACGGTTCATCTTGAGCCCAAGCGGCCCAGCACCTaGTCCAGTGCACGGTTCATC +
Preference number: 4 (lower is better)
Translates to: VEEEAAQHLVQCTVHLEPKRPST*SSARFI
Trigger: GATGAACCGTGCACTGGACCAGGTGCTGGGCCGCTT...GGGCTCAAGATGAACCGTGCACTGGACCAGGTGCTGGGCCGCTTCTTCCTCTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000635909.1
ENST00000636657.1
ENST00000638143.1
CDS-3UTR CCA 90 bp GCACCTGCAGGCTCCCCTCCTGAAGCGGACTCGGGCTCACAGGGAACACCCGCATCAGGCAGTACAGCCTaGCTCCATAGACGTAAAAGC +
Preference number: 4 (lower is better)
Translates to: APAGSPPEADSGSQGTPASGSTA*LHRRKS
Trigger: GCTTTTACGTCTATGGAGCCAGGCTGTACTGCCTGA...TGCGGGTGTTCCCTGTGAGCCCGAGTCCGCTTCAGGAGGGGAGCCTGCAGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp AGGGCAGTGGGTTTATCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCTCAGGCAGTACAGCCTaGCTCCATAGACGTAAAAGC +
Preference number: 4 (lower is better)
Translates to: RAVGLSASGGGGACRPRASGSTA*LHRRKS
Trigger: GCTTTTACGTCTATGGAGCCAGGCTGTACTGCCTGA...GGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGATAAACCCACTGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000443147.5
ENST00000635205.1
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp GGTGGTGCCAGGCGAGCCAGCAGTTCCCTCAGTCCTGCTTGTCCCCTCTCTGCCAGTGAGGACAGGCCATaGATCTTCAGGCAGTACAGC +
Preference number: 4 (lower is better)
Translates to: GGARRASSSLSPACPLSASEDRP*IFRQYS
Trigger: GCTGTACTGCCTGAAGATCCATGGCCTGTCCTCACT...GGCAGAGAGGGGACAAGCAGGACTGAGGGAACTGCTGGCTCGCCTGGCACCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000443147.5
ENST00000635205.1
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp GACCTCCAAGCCCAAGGTGTGATAGCAGGGCCTGCCGTGTTCAGGAGCACACAGAGTGCTCTGGACACCTaGGGTTGCTGTGCTCGCCAC +
Preference number: 4 (lower is better)
Translates to: DLQAQGVIAGPAVFRSTQSALDT*GCCARH
Trigger: GTGGCGAGCACAGCAACCCCAGGTGTCCAGAGCACT...CTGTGTGCTCCTGAACACGGCAGGCCCTGCTATCACACCTTGGGCTTGGAGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321878.10
ENST00000635205.1
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp CCTCCAAGCCCAAGGTGTGATAGCAGGGCCTGCCGTGTTCAGGAGCACACAGCACATGGGGCAGTGCTCTaGACACCTGGGGTTGCTGTG +
Preference number: 4 (lower is better)
Translates to: PPSPRCDSRACRVQEHTAHGAVL*TPGVAV
Trigger: CACAGCAACCCCAGGTGTCCAGAGCACTGCCCCATG...TGCTGTGTGCTCCTGAACACGGCAGGCCCTGCTATCACACCTTGGGCTTGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321878.10
ENST00000635205.1
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp AGAACGTTCCACTTCTTCCCCCGGAACAGACGCCACAGTGAGGACAGGCCATGGCCTGGGTACACAGGGTaGGCATGGGGCAGTGCTCTG +
Preference number: 4 (lower is better)
Translates to: RTFHFFPRNRRHSEDRPWPGYTG*AWGSAL
Trigger: CAGAGCACTGCCCCATGCCCACCCTGTGTACCCAGG...CCATGGCCTGTCCTCACTGTGGCGTCTGTTCCGGGGGAAGAAGTGGAACGTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp CTCCAGGGAACATCCGCAAATAAACCCCGTGTGGTTCAGGGAGTGAGGGCCCGGTGCTACGGGGCACCGTaGACGAATAGGTACGGCTGG +
Preference number: 4 (lower is better)
Translates to: LQGTSANKPRVVQGVRARCYGAP*TNRYGW
Trigger: CCAGCCGTACCTATTCGTCCACGGTGCCCCGTAGCA...CCGGGCCCTCACTCCCTGAACCACACGGGGTTTATTTGCGGATGTTCCCTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp GATGGCTGGCTGTGGCCGTGTGGTGGTGCCAGGCGAGCCAGCAGTTCCCTCAGTAAGAACAAAGGCCTGTaGCCTCAGGTCTCCAGGGTT +
Preference number: 4 (lower is better)
Translates to: DGWLWPCGGARRASSSLSKNKGL*PQVSRV
Trigger: AACCCTGGAGACCTGAGGCCACAGGCCTTTGTTCTT...ACTGAGGGAACTGCTGGCTCGCCTGGCACCACCACACGGCCACAGCCAGCCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443147.5
CDS-3UTR CCA 90 bp CTCCAGAGCATGGAGAAGGTAGAACTGGCTTTGTGGGGCGGTGGCTCTGGCCCGTGGAGTTCCTGCTTCTaGTTCAGGGGAGGGCCGTGT +
Preference number: 4 (lower is better)
Translates to: LQSMEKVELALWGGGSGPWSSCF*FRGGPC
Trigger: ACACGGCCCTCCCCTGAACCAGAAGCAGGAACTCCA...CGGGCCAGAGCCACCGCCCCACAAAGCCAGTTCTACCTTCTCCATGCTCTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470411.2
CDS-3UTR CCA 90 bp GCACTTTTGCAAAAGGGAGGTCTAGGACAAAGTAGGCCGGTGGCAGGTGCGGACGAGATACCAGGACGCTaGGCCCACAGGGAGAGGCGG +
Preference number: 4 (lower is better)
Translates to: ALLQKGGLGQSRPVAGADEIPGR*AHRERR
Trigger: CCGCCTCTCCCTGTGGGCCCAGCGTCCTGGTATCTC...GTCCGCACCTGCCACCGGCCTACTTTGTCCTAGACCTCCCTTTTGCAAAAGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR CCA 90 bp AGAGCCAGGAGGGCAACGCTGATCTCAGGGACCACAAGGGAGATACCAGGACGCCAGCTGGGCTGCACATaGGCCTCCCTGGACAGGAAA +
Preference number: 4 (lower is better)
Translates to: RARRATLISGTTREIPGRQLGCT*ASLDRK
Trigger: TTTCCTGTCCAGGGAGGCCCATGTGCAGCCCAGCTG...GCGTCCTGGTATCTCCCTTGTGGTCCCTGAGATCAGCGTTGCCCTCCTGGCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR CCA 90 bp CCTGGCCACAAGCAGGCCCAGTGCACACCTGCAGCCCACACAAGACCCACCCAGGACAAGCTGTGCCTCTaGCTCTCAGCACAGGAGTTA +
Preference number: 4 (lower is better)
Translates to: PGHKQAQCTPAAHTRPTQDKLCL*LSAQEL
Trigger: TAACTCCTGTGCTGAGAGCCAGAGGCACAGCTTGTC...CTGGGTGGGTCTTGTGTGGGCTGCAGGTGTGCACTGGGCCTGCTTGTGGCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR TCA 90 bp GGAACAGGAGTCCACGCGCTGGCGCAGAACGTTCCACTTCTTCCCCCGGAACAGGAACAGACGCCACAGTaGGGACAGGCCATGGATCTT +
Preference number: 4 (lower is better)
Translates to: GTGVHALAQNVPLLPPEQEQTPQ*GQAMDL
Trigger: AAGATCCATGGCCTGTCCTCACTGTGGCGTCTGTTC...CTGTTCCGGGGGAAGAAGTGGAACGTTCTGCGCCAGCGCGTGGACTCCTGTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000635909.1
ENST00000636657.1
ENST00000638143.1
CDS-3UTR TCA 90 bp GAGTTGATGAGGTCCACGAGCAGATGGATCAGGCCCTGCACGGCGACCACCAGGAGAGCAGAGTCCCGATaGACAGCTGGTCCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: ELMRSTSRWIRPCTATTRRAESR*TAGPGH
Trigger: ATGACCTGGACCAGCTGTTCATCGGGACTCTGCTCT...CCTGGTGGTCGCCGTGCAGGGCCTGATCCATCTGCTCGTGGACCTCATCAACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000635909.1
ENST00000636657.1
ENST00000638143.1
CDS-3UTR TCA 90 bp AGCGACTGCTTCAATCCCCCAGATGCAGGGTGCTGTTCGGCTGAGGGAGCTAGAGAGCCGAAGACCCAGTaGGTACAGCGGCAGGGAGTT +
Preference number: 4 (lower is better)
Translates to: SDCFNPPDAGCCSAEGAREPKTQ*VQRQGV
Trigger: AACTCCCTGCCGCTGTACTCACTGGGTCTTCGGCTC...TCTAGCTCCCTCAGCCGAACAGCACCCTGCATCTGGGGGATTGAAGCAGTCGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR TCA 90 bp ACTCCCAATGACCTCCAAGCCCAAGGTGTGATAGCAGGGCCTGCCGTGTTCAGGGCCTCCAGGGGTAGATaGGCTCCCCAAGGAACAGCT +
Preference number: 4 (lower is better)
Translates to: TPNDLQAQGVIAGPAVFRASRGR*APQGTA
Trigger: AGCTGTTCCTTGGGGAGCTCATCTACCCCTGGAGGC...CCTGAACACGGCAGGCCCTGCTATCACACCTTGGGCTTGGAGGTCATTGGGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000321878.10
ENST00000540241.1
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR TCA 90 bp CTGGTCCAGGTCATAGGAACAGGAGTCCACGCGCTGGCGCAGAACGTTCCACTTGCCTCCAGGGGTAGATaGGCTCCCCAAGGAACAGCT +
Preference number: 4 (lower is better)
Translates to: LVQVIGTGVHALAQNVPLASRGR*APQGTA
Trigger: AGCTGTTCCTTGGGGAGCTCATCTACCCCTGGAGGC...AAGTGGAACGTTCTGCGCCAGCGCGTGGACTCCTGTTCCTATGACCTGGACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp GAAGGCCCAGAGGCAGCATGGAAATGCACTAGATCTGCAGAGGAGGGGGCTGCAACCTGGGCCAGGAGCTaGTTGACCTGGATGGGGATG +
Preference number: 4 (lower is better)
Translates to: EGPEAAWKCTRSAEEGAATWARS*LTWMGM
Trigger: CATCCCCATCCAGGTCAAGCAGCTCCTGGCCCAGGT...TGCAGCCCCCTCCTCTGCAGATCTAGTGCATTTCCATGCTGCCTCTGGGCCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR GCA 90 bp AGCGACTGCTTCAATCCCCCAGATGCAGGGTGCTGTTCGGCTGAGGGAGCTAGAACCTGGGCCAGGAGCTaGTTGACCTGGATGGGGATG +
Preference number: 4 (lower is better)
Translates to: SDCFNPPDAGCCSAEGARTWARS*LTWMGM
Trigger: CATCCCCATCCAGGTCAAGCAGCTCCTGGCCCAGGT...TCTAGCTCCCTCAGCCGAACAGCACCCTGCATCTGGGGGATTGAAGCAGTCGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321878.10
ENST00000636657.1
CDS-3UTR GCA 90 bp GATGTGGTAGAGGAAGAAGCGGCCCAGCACCTGGTCCAGTGCACGGTTCATCTTAGCCACTGCAGCAGATaGTGGAGCTCCTCGGCCACG +
Preference number: 4 (lower is better)
Translates to: DVVEEEAAQHLVQCTVHLSHCSR*WSSSAT
Trigger: CGTGGCCGAGGAGCTCCAGCATCTGCTGCAGTGGCT...AAGATGAACCGTGCACTGGACCAGGTGCTGGGCCGCTTCTTCCTCTACCACATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000635909.1
ENST00000636657.1
ENST00000638143.1
CDS-3UTR GCA 90 bp CGTTCCACTTCTTCCCCCGGAACAGACGCCACAGTGAGGACAGGCCATGGATCTGCACCCATCAGCCACTaGAGCAGATGCTGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: RSTSSPGTDATVRTGHGSAPISH*SRCWSS
Trigger: GGAGCTCCAGCATCTGCTGCAGTGGCTGATGGGTGC...AGATCCATGGCCTGTCCTCACTGTGGCGTCTGTTCCGGGGGAAGAAGTGGAACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000635909.1
ENST00000636657.1
ENST00000638143.1
CDS-3UTR GCA 90 bp CCCCGGAACAGACGCCACAGTGAGGACAGGCCATGGATCTTCAGGCAGTACAGCCAGCACCTGGTCCAGTaGACGGTTCATCTTGAGCCC +
Preference number: 4 (lower is better)
Translates to: PRNRRHSEDRPWIFRQYSQHLVQ*TVHLEP
Trigger: GGGCTCAAGATGAACCGTGCACTGGACCAGGTGCTG...GCTGTACTGCCTGAAGATCCATGGCCTGTCCTCACTGTGGCGTCTGTTCCGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000635909.1
ENST00000636657.1
ENST00000638143.1
CDS-3UTR GCA 90 bp TGGGGAGGCGGTAGGTGTGCACCACGCGGCTGTAGGGCAGTGGGTTTATCTGCAACGTGCCAAAGGATGTaGTCCACGAAGGGGGACATG +
Preference number: 4 (lower is better)
Translates to: WGGGRCAPRGCRAVGLSATCQRM*STKGDM
Trigger: CATGTCCCCCTTCGTGGAGCACATCCTTTGGCACGT...TGCAGATAAACCCACTGCCCTACAGCCGCGTGGTGCACACCTACCGCCTCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000443147.5
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR GCA 90 bp GCCCAAGGTGTGATAGCAGGGCCTGCCGTGTTCAGGAGCACACAGCAGCGTCCATGTGATAGCAGGGCCTaGCGTGTTCAGGAGCACACA +
Preference number: 4 (lower is better)
Translates to: AQGVIAGPAVFRSTQQRPCDSRA*RVQEHT
Trigger: TGTGTGCTCCTGAACACGGCAGGCCCTGCTATCACA...TGGACGCTGCTGTGTGCTCCTGAACACGGCAGGCCCTGCTATCACACCTTGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000321878.10
ENST00000540241.1
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR GCA 90 bp CTGGTCCAGGTCATAGGAACAGGAGTCCACGCGCTGGCGCAGAACGTTCCACTTGGCCACCCCCACATCTaGTCACTCCCAATGACCTCC +
Preference number: 4 (lower is better)
Translates to: LVQVIGTGVHALAQNVPLGHPHI*SLPMTS
Trigger: GGAGGTCATTGGGAGTGAGCAGATGTGGGGGTGGCC...AAGTGGAACGTTCTGCGCCAGCGCGTGGACTCCTGTTCCTATGACCTGGACCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp AATGACCTCCAAGCCCAAGGTGTGATAGCAGGGCCTGCCGTGTTCAGGAGCACACCCCCAGATGCAGGGTaGTGTTCGGCTGAGGGAGCT +
Preference number: 4 (lower is better)
Translates to: NDLQAQGVIAGPAVFRSTPPDAG*CSAEGA
Trigger: AGCTCCCTCAGCCGAACAGCACCCTGCATCTGGGGG...TGTGCTCCTGAACACGGCAGGCCCTGCTATCACACCTTGGGCTTGGAGGTCATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp CTCCAGGGAACATCCGCAAATAAACCCCGTGTGGTTCAGGGAGTGAGGGCCCGGACAGCAGCCTGGCGATaGTCACAGCCTGCTGATGGT +
Preference number: 4 (lower is better)
Translates to: LQGTSANKPRVVQGVRARTAAWR*SQPADG
Trigger: ACCATCAGCAGGCTGTGAGCATCGCCAGGCTGCTGT...CCGGGCCCTCACTCCCTGAACCACACGGGGTTTATTTGCGGATGTTCCCTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp AAGCGACCTCTCCAGGGAACATCCGCAAATAAACCCCGTGTGGTTCAGGGAGTGTTTGGCCGCAGGACCTaGTGCTACGGGGCACCGTGG +
Preference number: 4 (lower is better)
Translates to: KRPLQGTSANKPRVVQGVFGRRT*CYGAPW
Trigger: CCACGGTGCCCCGTAGCAGCAGGTCCTGCGGCCAAA...CACTCCCTGAACCACACGGGGTTTATTTGCGGATGTTCCCTGGAGAGGTCGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp CCTGGCCACAAGCAGGCCCAGTGCACACCTGCAGCCCACACAAGACCCACCCAGGAGGCAGCATGGAAATaGACTAGATCTGCAGAGGAG +
Preference number: 4 (lower is better)
Translates to: PGHKQAQCTPAAHTRPTQEAAWK*TRSAEE
Trigger: CTCCTCTGCAGATCTAGTGCATTTCCATGCTGCCTC...CTGGGTGGGTCTTGTGTGGGCTGCAGGTGTGCACTGGGCCTGCTTGTGGCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR GCA 90 bp GAGTTGATGAGGTCCACGAGCAGATGGATCAGGCCCTGCACGGCGACCACCAGGTACAGCCTGGTCCAGTaGACGGTTCATCTTGAGCCC +
Preference number: 4 (lower is better)
Translates to: ELMRSTSRWIRPCTATTRYSLVQ*TVHLEP
Trigger: GGGCTCAAGATGAACCGTGCACTGGACCAGGCTGTA...CCTGGTGGTCGCCGTGCAGGGCCTGATCCATCTGCTCGTGGACCTCATCAACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637468.1
CDS-3UTR CCA 90 bp CCGTGGACGAATAGGTACGGCTGGGTCAGTGGGCGGGCCCTTGACACTGAGGCTAGGAGCTGCTTGACCTaGATGGGGATGAAGGGAAAG +
Preference number: 4 (lower is better)
Translates to: PWTNRYGWVSGRALDTEARSCLT*MGMKGK
Trigger: CTTTCCCTTCATCCCCATCCAGGTCAAGCAGCTCCT...AGCCTCAGTGTCAAGGGCCCGCCCACTGACCCAGCCGTACCTATTCGTCCACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000636657.1
CDS-3UTR CCA 90 bp CCAGAGAGCCAGGAGGGCAACGCTGATCTCAGGGACCACAAGGGAGATACCAGGGGAGCTGTTCGCACGTaGAGAGTTTGCTCCCGAGGA +
Preference number: 4 (lower is better)
Translates to: PESQEGNADLRDHKGDTRGAVRT*RVCSRG
Trigger: TCCTCGGGAGCAAACTCTCCACGTGCGAACAGCTCC...CCTGGTATCTCCCTTGTGGTCCCTGAGATCAGCGTTGCCCTCCTGGCTCTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR CCA 90 bp ACGTTCCACTTCTTCCCCCGGAACAGACGCCACAGTGAGGACAGGCCATGGATCATGCGGCTTCTCCCGTaGAGCCAGGACAGCAGCATG +
Preference number: 4 (lower is better)
Translates to: TFHFFPRNRRHSEDRPWIMRLLP*SQDSSM
Trigger: CATGCTGCTGTCCTGGCTCCACGGGAGAAGCCGCAT...GATCCATGGCCTGTCCTCACTGTGGCGTCTGTTCCGGGGGAAGAAGTGGAACGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000635909.1
ENST00000636657.1
ENST00000638143.1
CDS-3UTR CCA 90 bp CAAGGTGTGATAGCAGGGCCTGCCGTGTTCAGGAGCACACAGCAGCGTCCACAAAAGCGGCCCAGCACCTaGTCCAGTGCACGGTTCATC +
Preference number: 4 (lower is better)
Translates to: QGVIAGPAVFRSTQQRPQKRPST*SSARFI
Trigger: GATGAACCGTGCACTGGACCAGGTGCTGGGCCGCTT...TTGTGGACGCTGCTGTGTGCTCCTGAACACGGCAGGCCCTGCTATCACACCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321878.10
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR CCA 90 bp CACACCCCACCCCAGGACTCACTCAGTCGGTTCTGTTCCACCCAGAACTTGAGCAAGCGGCCCAGCACCTaGTCCAGTGCACGGTTCATC +
Preference number: 4 (lower is better)
Translates to: HTPPQDSLSRFCSTQNLSKRPST*SSARFI
Trigger: GATGAACCGTGCACTGGACCAGGTGCTGGGCCGCTT...GCTCAAGTTCTGGGTGGAACAGAACCGACTGAGTGAGTCCTGGGGTGGGGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420990.6
CDS-3UTR CCA 90 bp GGATGTGGTAGAGGAAGAAGCGGCCCAGCACCTGGTCCAGTGCACGGTTCATCTAAGCGGCCCAGCACCTaGTCCAGTGCACGGTTCATC +
Preference number: 4 (lower is better)
Translates to: GCGRGRSGPAPGPVHGSSKRPST*SSARFI
Trigger: GATGAACCGTGCACTGGACCAGGTGCTGGGCCGCTT...AGATGAACCGTGCACTGGACCAGGTGCTGGGCCGCTTCTTCCTCTACCACATCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000635909.1
ENST00000636657.1
ENST00000638143.1
CDS-3UTR CCA 90 bp GGGACGGGGGTCAGCGACTGCTTCAATCCCCCAGATGCAGGGTGCTGTTCGGCTAGTGAGGACAGGCCATaGATCTTCAGGCAGTACAGC +
Preference number: 4 (lower is better)
Translates to: GTGVSDCFNPPDAGCCSASEDRP*IFRQYS
Trigger: GCTGTACTGCCTGAAGATCCATGGCCTGTCCTCACT...AGCCGAACAGCACCCTGCATCTGGGGGATTGAAGCAGTCGCTGACCCCCGTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp GTCCACGCGCTGGCGCAGAACGTTCCACTTCTTCCCCCGGAACAGACGCCACAGAGTGAGGACAGGCCATaGATCTTCAGGCAGTACAGC +
Preference number: 4 (lower is better)
Translates to: VHALAQNVPLLPPEQTPQSEDRP*IFRQYS
Trigger: GCTGTACTGCCTGAAGATCCATGGCCTGTCCTCACT...CTGTGGCGTCTGTTCCGGGGGAAGAAGTGGAACGTTCTGCGCCAGCGCGTGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000635909.1
ENST00000636657.1
ENST00000638143.1
CDS-3UTR CCA 90 bp CCCAGTGAGTACAGCGGCAGGGAGTTGATGAGGTCCACGAGCAGATGGATCAGGCAGGAGTCCACGCGCTaGCGCAGAACGTTCCACTTC +
Preference number: 4 (lower is better)
Translates to: PSEYSGRELMRSTSRWIRQESTR*RRTFHF
Trigger: GAAGTGGAACGTTCTGCGCCAGCGCGTGGACTCCTG...CCTGATCCATCTGCTCGTGGACCTCATCAACTCCCTGCCGCTGTACTCACTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000635909.1
ENST00000636657.1
ENST00000637468.1
CDS-3UTR CCA 90 bp AATGACCTCCAAGCCCAAGGTGTGATAGCAGGGCCTGCCGTGTTCAGGAGCACAGAGCTGGTGCCACCCTaGCAGAGCAGATGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: NDLQAQGVIAGPAVFRSTELVPP*QSRWLA
Trigger: AGCCAGCCATCTGCTCTGCCAGGGTGGCACCAGCTC...TGTGCTCCTGAACACGGCAGGCCCTGCTATCACACCTTGGGCTTGGAGGTCATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000321878.10
ENST00000540241.1
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR CCA 90 bp AGCGACTGCTTCAATCCCCCAGATGCAGGGTGCTGTTCGGCTGAGGGAGCTAGAAGTGCTCTGGACACCTaGGGTTGCTGTGCTCGCCAC +
Preference number: 4 (lower is better)
Translates to: SDCFNPPDAGCCSAEGARSALDT*GCCARH
Trigger: GTGGCGAGCACAGCAACCCCAGGTGTCCAGAGCACT...TCTAGCTCCCTCAGCCGAACAGCACCCTGCATCTGGGGGATTGAAGCAGTCGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp TTCCACTTCTTCCCCCGGAACAGACGCCACAGTGAGGACAGGCCATGGATCTTCGAGGGTGCCTGGGACTaGGGGGTTCATCCTGGCAAG +
Preference number: 4 (lower is better)
Translates to: FHFFPRNRRHSEDRPWIFEGAWD*GVHPGK
Trigger: CTTGCCAGGATGAACCCCCCAGTCCCAGGCACCCTC...GAAGATCCATGGCCTGTCCTCACTGTGGCGTCTGTTCCGGGGGAAGAAGTGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp TGGGGAGGCGGTAGGTGTGCACCACGCGGCTGTAGGGCAGTGGGTTTATCTGCAGCGGCTGTAGGGCAGTaGGTTTATCTGCATCAGGAG +
Preference number: 4 (lower is better)
Translates to: WGGGRCAPRGCRAVGLSAAAVGQ*VYLHQE
Trigger: CTCCTGATGCAGATAAACCCACTGCCCTACAGCCGC...TGCAGATAAACCCACTGCCCTACAGCCGCGTGGTGCACACCTACCGCCTCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443147.5
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR CCA 90 bp CCAGAGAGCCAGGAGGGCAACGCTGATCTCAGGGACCACAAGGGAGATACCAGGTGGAGTTCCTGCTTCTaGTTCAGGGGAGGGCCGTGT +
Preference number: 4 (lower is better)
Translates to: PESQEGNADLRDHKGDTRWSSCF*FRGGPC
Trigger: ACACGGCCCTCCCCTGAACCAGAAGCAGGAACTCCA...CCTGGTATCTCCCTTGTGGTCCCTGAGATCAGCGTTGCCCTCCTGGCTCTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR CCA 90 bp CTCCAGAGCATGGAGAAGGTAGAACTGGCTTTGTGGGGCGGTGGCTCTGGCCCGAGGGAAGGTGGGAGATaGGAGACAAGCTGTGCCTCT +
Preference number: 4 (lower is better)
Translates to: LQSMEKVELALWGGGSGPREGGR*ETSCAS
Trigger: AGAGGCACAGCTTGTCTCCCATCTCCCACCTTCCCT...CGGGCCAGAGCCACCGCCCCACAAAGCCAGTTCTACCTTCTCCATGCTCTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470411.2
CDS-3UTR TCA 90 bp CCTCCAAGCCCAAGGTGTGATAGCAGGGCCTGCCGTGTTCAGGAGCACACAGCAGAACAGACGCCACAGTaGGGACAGGCCATGGATCTT +
Preference number: 4 (lower is better)
Translates to: PPSPRCDSRACRVQEHTAEQTPQ*GQAMDL
Trigger: AAGATCCATGGCCTGTCCTCACTGTGGCGTCTGTTC...TGCTGTGTGCTCCTGAACACGGCAGGCCCTGCTATCACACCTTGGGCTTGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321878.10
ENST00000635205.1
ENST00000635909.1
ENST00000636657.1
CDS-3UTR TCA 90 bp GAACAGGAGTCCACGCGCTGGCGCAGAACGTTCCACTTCTTCCCCCGGAACAGAGAACAGACGCCACAGTaGGGACAGGCCATGGATCTT +
Preference number: 4 (lower is better)
Translates to: EQESTRWRRTFHFFPRNREQTPQ*GQAMDL
Trigger: AAGATCCATGGCCTGTCCTCACTGTGGCGTCTGTTC...TCTGTTCCGGGGGAAGAAGTGGAACGTTCTGCGCCAGCGCGTGGACTCCTGTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000635909.1
ENST00000636657.1
ENST00000638143.1
CDS-3UTR TCA 90 bp GGTGTGATAGCAGGGCCTGCCGTGTTCAGGAGCACACAGCAGCGTCCACAAAGCTCTGCTCACTCCCAATaGCCTCCAAGCCCAAGGTGT +
Preference number: 4 (lower is better)
Translates to: GVIAGPAVFRSTQQRPQSSAHSQ*PPSPRC
Trigger: ACACCTTGGGCTTGGAGGTCATTGGGAGTGAGCAGA...GCTTTGTGGACGCTGCTGTGTGCTCCTGAACACGGCAGGCCCTGCTATCACACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000321878.10
ENST00000540241.1
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR TCA 90 bp GAACAGGAGTCCACGCGCTGGCGCAGAACGTTCCACTTCTTCCCCCGGAACAGATCTGCTCACTCCCAATaGCCTCCAAGCCCAAGGTGT +
Preference number: 4 (lower is better)
Translates to: EQESTRWRRTFHFFPRNRSAHSQ*PPSPRC
Trigger: ACACCTTGGGCTTGGAGGTCATTGGGAGTGAGCAGA...TCTGTTCCGGGGGAAGAAGTGGAACGTTCTGCGCCAGCGCGTGGACTCCTGTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635909.1
ENST00000636657.1
CDS-3UTR TCA 90 bp CACCGTGGACGAATAGGTACGGCTGGGTCAGTGGGCGGGCCCTTGACACTGAGGATGCTCACAGCCTGCTaGTGGTTTCTTCACAAAGCG +
Preference number: 4 (lower is better)
Translates to: HRGRIGTAGSVGGPLTLRMLTAC*WFLHKA
Trigger: CGCTTTGTGAAGAAACCATCAGCAGGCTGTGAGCAT...CCTCAGTGTCAAGGGCCCGCCCACTGACCCAGCCGTACCTATTCGTCCACGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR TCA 90 bp CCGTGGACGAATAGGTACGGCTGGGTCAGTGGGCGGGCCCTTGACACTGAGGCTATGCTCACAGCCTGCTaGTGGTTTCTTCACAAAGCG +
Preference number: 4 (lower is better)
Translates to: PWTNRYGWVSGRALDTEAMLTAC*WFLHKA
Trigger: CGCTTTGTGAAGAAACCATCAGCAGGCTGTGAGCAT...AGCCTCAGTGTCAAGGGCCCGCCCACTGACCCAGCCGTACCTATTCGTCCACGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR TCA 90 bp CAAGGTGTGATAGCAGGGCCTGCCGTGTTCAGGAGCACACAGCAGCGTCCACAATTCACGCCAGCAGGGTaGACACCAGGTAGTACAGGG +
Preference number: 4 (lower is better)
Translates to: QGVIAGPAVFRSTQQRPQFTPAG*TPGSTG
Trigger: CCCTGTACTACCTGGTGTTCACCCTGCTGGCGTGAA...TTGTGGACGCTGCTGTGTGCTCCTGAACACGGCAGGCCCTGCTATCACACCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635205.1
CDS-3UTR GCA 90 bp CCAGAGAGCCAGGAGGGCAACGCTGATCTCAGGGACCACAAGGGAGATACCAGGGGAAGAGCACCTCACTaGGTGCTACCGTGTCGAAGA +
Preference number: 4 (lower is better)
Translates to: PESQEGNADLRDHKGDTRGRAPH*VLPCRR
Trigger: TCTTCGACACGGTAGCACGCAGTGAGGTGCTCTTCC...CCTGGTATCTCCCTTGTGGTCCCTGAGATCAGCGTTGCCCTCCTGGCTCTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR GCA 90 bp GGAGGGCCGTGTCTCCAGAGCATGGAGAAGGTAGAACTGGCTTTGTGGGGCGGTGGAAGAGCACCTCACTaGGTGCTACCGTGTCGAAGA +
Preference number: 4 (lower is better)
Translates to: GGPCLQSMEKVELALWGGGRAPH*VLPCRR
Trigger: TCTTCGACACGGTAGCACGCAGTGAGGTGCTCTTCC...ACCGCCCCACAAAGCCAGTTCTACCTTCTCCATGCTCTGGAGACACGGCCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470411.2
CDS-3UTR GCA 90 bp AATGACCTCCAAGCCCAAGGTGTGATAGCAGGGCCTGCCGTGTTCAGGAGCACAAAGATTAGCGTGAGGTaGTCCAGCCGGTGCCGGAGC +
Preference number: 4 (lower is better)
Translates to: NDLQAQGVIAGPAVFRSTKISVR*SSRCRS
Trigger: GCTCCGGCACCGGCTGGAGCACCTCACGCTAATCTT...TGTGCTCCTGAACACGGCAGGCCCTGCTATCACACCTTGGGCTTGGAGGTCATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321878.10
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR GCA 90 bp AGCACACAGCAGCGTCCACAAAGCACAGGACATGCGCCAGCTGAGCTGGTGCCAACGTGCCAAAGGATGTaGTCCACGAAGGGGGACATG +
Preference number: 4 (lower is better)
Translates to: STQQRPQSTGHAPAELVPTCQRM*STKGDM
Trigger: CATGTCCCCCTTCGTGGAGCACATCCTTTGGCACGT...TGGCACCAGCTCAGCTGGCGCATGTCCTGTGCTTTGTGGACGCTGCTGTGTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321878.10
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR CCA 90 bp GAAGGCCCAGAGGCAGCATGGAAATGCACTAGATCTGCAGAGGAGGGGGCTGCAAAGATGAGCATGACCTaGTCCTCACCAGGGGCACCG +
Preference number: 4 (lower is better)
Translates to: EGPEAAWKCTRSAEEGAAKMSMT*SSPGAP
Trigger: CGGTGCCCCTGGTGAGGACCAGGTCATGCTCATCTT...TGCAGCCCCCTCCTCTGCAGATCTAGTGCATTTCCATGCTGCCTCTGGGCCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR CCA 90 bp CAAGGTGTGATAGCAGGGCCTGCCGTGTTCAGGAGCACACAGCAGCGTCCACAAGGAGCTGTTCGCACGTaGAGAGTTTGCTCCCGAGGA +
Preference number: 4 (lower is better)
Translates to: QGVIAGPAVFRSTQQRPQGAVRT*RVCSRG
Trigger: TCCTCGGGAGCAAACTCTCCACGTGCGAACAGCTCC...TTGTGGACGCTGCTGTGTGCTCCTGAACACGGCAGGCCCTGCTATCACACCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321878.10
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR CCA 90 bp GCACTTTTGCAAAAGGGAGGTCTAGGACAAAGTAGGCCGGTGGCAGGTGCGGACGCCTTCCTCATCAGCTaGGCAGGGTTCTCCGCCTTC +
Preference number: 4 (lower is better)
Translates to: ALLQKGGLGQSRPVAGADAFLIS*AGFSAF
Trigger: GAAGGCGGAGAACCCTGCCCAGCTGATGAGGAAGGC...GTCCGCACCTGCCACCGGCCTACTTTGTCCTAGACCTCCCTTTTGCAAAAGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422307.6
CDS-3UTR CCA 90 bp GCACTTTTGCAAAAGGGAGGTCTAGGACAAAGTAGGCCGGTGGCAGGTGCGGACACAGAGGCCCGAGGGTaGGCCAAAGAGTCAGGTACC +
Preference number: 4 (lower is better)
Translates to: ALLQKGGLGQSRPVAGADTEARG*AKESGT
Trigger: GGTACCTGACTCTTTGGCCCACCCTCGGGCCTCTGT...GTCCGCACCTGCCACCGGCCTACTTTGTCCTAGACCTCCCTTTTGCAAAAGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR TCA 90 bp GTAGAGGAAGAAGCGGCCCAGCACCTGGTCCAGTGCACGGTTCATCTTGAGCCCTTCAGGCAGTACAGCTaGTCCACAGGTGGATGTGGT +
Preference number: 4 (lower is better)
Translates to: VEEEAAQHLVQCTVHLEPFRQYS*STGGCG
Trigger: ACCACATCCACCTGTGGATCAGCTGTACTGCCTGAA...GGGCTCAAGATGAACCGTGCACTGGACCAGGTGCTGGGCCGCTTCTTCCTCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638143.1
CDS-3UTR GCA 90 bp CGTTCCACTTCTTCCCCCGGAACAGACGCCACAGTGAGGACAGGCCATGGATCTCATCAAAGCGGTCACTaGGGAAGAGCACCTCACTGC +
Preference number: 4 (lower is better)
Translates to: RSTSSPGTDATVRTGHGSHQSGH*GRAPHC
Trigger: GCAGTGAGGTGCTCTTCCGCAGTGACCGCTTTGATG...AGATCCATGGCCTGTCCTCACTGTGGCGTCTGTTCCGGGGGAAGAAGTGGAACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636657.1
CDS-3UTR GCA 90 bp AAGCGACCTCTCCAGGGAACATCCGCAAATAAACCCCGTGTGGTTCAGGGAGTGCGCACGTGGAGAGTTTaGTCCCGAGGAAGGACAGGG +
Preference number: 4 (lower is better)
Translates to: KRPLQGTSANKPRVVQGVRTWRV*SRGRTG
Trigger: CCCTGTCCTTCCTCGGGAGCAAACTCTCCACGTGCG...CACTCCCTGAACCACACGGGGTTTATTTGCGGATGTTCCCTGGAGAGGTCGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR GCA 90 bp AATGACCTCCAAGCCCAAGGTGTGATAGCAGGGCCTGCCGTGTTCAGGAGCACACAGTTCCCTCAGTCCTaGTTGTCCCCTCTCTGCCTC +
Preference number: 4 (lower is better)
Translates to: NDLQAQGVIAGPAVFRSTQFPQS*LSPLCL
Trigger: GAGGCAGAGAGGGGACAAGCAGGACTGAGGGAACTG...TGTGCTCCTGAACACGGCAGGCCCTGCTATCACACCTTGGGCTTGGAGGTCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000321878.10
ENST00000540241.1
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR GCA 90 bp GAAGGCCCAGAGGCAGCATGGAAATGCACTAGATCTGCAGAGGAGGGGGCTGCAATGGGAGACAAGCTGTaGCTCTGGCTCTCAGCACAG +
Preference number: 4 (lower is better)
Translates to: EGPEAAWKCTRSAEEGAAMGDKL*LWLSAQ
Trigger: CTGTGCTGAGAGCCAGAGGCACAGCTTGTCTCCCAT...TGCAGCCCCCTCCTCTGCAGATCTAGTGCATTTCCATGCTGCCTCTGGGCCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR CCA 90 bp CAGCCTGCTGATGGTTTCTTCACAAAGCGACCTCTCCAGGGAACATCCGCAAATCGCAGCCAGGGCTCATaGGGGAAGACAGCACCCAGG +
Preference number: 4 (lower is better)
Translates to: QPADGFFTKRPLQGTSANRSQGS*GKTAPR
Trigger: CCTGGGTGCTGTCTTCCCCCATGAGCCCTGGCTGCG...ATTTGCGGATGTTCCCTGGAGAGGTCGCTTTGTGAAGAAACCATCAGCAGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321878.10
ENST00000636657.1
CDS-3UTR CCA 90 bp AATGACCTCCAAGCCCAAGGTGTGATAGCAGGGCCTGCCGTGTTCAGGAGCACAGGAGCTGTTCGCACGTaGAGAGTTTGCTCCCGAGGA +
Preference number: 4 (lower is better)
Translates to: NDLQAQGVIAGPAVFRSTGAVRT*RVCSRG
Trigger: TCCTCGGGAGCAAACTCTCCACGTGCGAACAGCTCC...TGTGCTCCTGAACACGGCAGGCCCTGCTATCACACCTTGGGCTTGGAGGTCATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321878.10
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR CCA 90 bp CACAGCAGCGTCCACAAAGCACAGGACATGCGCCAGCTGAGCTGGTGCCACCCTTCAGGCAGTACAGCCTaGCTCCATAGACGTAAAAGC +
Preference number: 4 (lower is better)
Translates to: HSSVHKAQDMRQLSWCHPSGSTA*LHRRKS
Trigger: GCTTTTACGTCTATGGAGCCAGGCTGTACTGCCTGA...AGGGTGGCACCAGCTCAGCTGGCGCATGTCCTGTGCTTTGTGGACGCTGCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321878.10
ENST00000635205.1
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp AGCCCAAGGTGTGATAGCAGGGCCTGCCGTGTTCAGGAGCACACAGCAGCGTCCTCAGGCAGTACAGCCTaGCTCCATAGACGTAAAAGC +
Preference number: 4 (lower is better)
Translates to: SPRCDSRACRVQEHTAASSGSTA*LHRRKS
Trigger: GCTTTTACGTCTATGGAGCCAGGCTGTACTGCCTGA...GGACGCTGCTGTGTGCTCCTGAACACGGCAGGCCCTGCTATCACACCTTGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321878.10
ENST00000635205.1
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp AGGAAGAGCAGGATGGTGAAGAGCAGAGTCCCGATGAACAGCTGGTCCAGGTCACAGGAGTCCACGCGCTaGCGCAGAACGTTCCACTTC +
Preference number: 4 (lower is better)
Translates to: RKSRMVKSRVPMNSWSRSQESTR*RRTFHF
Trigger: GAAGTGGAACGTTCTGCGCCAGCGCGTGGACTCCTG...TGACCTGGACCAGCTGTTCATCGGGACTCTGCTCTTCACCATCCTGCTCTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000635909.1
ENST00000636657.1
ENST00000638143.1
CDS-3UTR CCA 90 bp CGTTCCACTTCTTCCCCCGGAACAGACGCCACAGTGAGGACAGGCCATGGATCTGAAGGGAGACAGATTTaGCCGCAGGACCTGCTGCTA +
Preference number: 4 (lower is better)
Translates to: RSTSSPGTDATVRTGHGSEGRQI*PQDLLL
Trigger: TAGCAGCAGGTCCTGCGGCCAAATCTGTCTCCCTTC...AGATCCATGGCCTGTCCTCACTGTGGCGTCTGTTCCGGGGGAAGAAGTGGAACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CCA 90 bp GTGATAGCAGGGCCTGCCGTGTTCAGGAGCACACAGCAGCGTCCACAAAGCACAGCGGCTGTAGGGCAGTaGGTTTATCTGCATCAGGAG +
Preference number: 4 (lower is better)
Translates to: VIAGPAVFRSTQQRPQSTAAVGQ*VYLHQE
Trigger: CTCCTGATGCAGATAAACCCACTGCCCTACAGCCGC...TGTGCTTTGTGGACGCTGCTGTGTGCTCCTGAACACGGCAGGCCCTGCTATCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000321878.10
ENST00000540241.1
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR TCA 90 bp GCACTTTTGCAAAAGGGAGGTCTAGGACAAAGTAGGCCGGTGGCAGGTGCGGACACAGGAAAGGTTTCATaGCCCTGGCTCTGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: ALLQKGGLGQSRPVAGADTGKVS*PWLCRG
Trigger: CCCTCTGCAGAGCCAGGGTCATGAAACCTTTCCTGT...GTCCGCACCTGCCACCGGCCTACTTTGTCCTAGACCTCCCTTTTGCAAAAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR GCA 90 bp GCACTTTTGCAAAAGGGAGGTCTAGGACAAAGTAGGCCGGTGGCAGGTGCGGACATGGGAGACAAGCTGTaGCTCTGGCTCTCAGCACAG +
Preference number: 4 (lower is better)
Translates to: ALLQKGGLGQSRPVAGADMGDKL*LWLSAQ
Trigger: CTGTGCTGAGAGCCAGAGGCACAGCTTGTCTCCCAT...GTCCGCACCTGCCACCGGCCTACTTTGTCCTAGACCTCCCTTTTGCAAAAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR GCA 90 bp CCAGAGAGCCAGGAGGGCAACGCTGATCTCAGGGACCACAAGGGAGATACCAGGGAGGCAGCATGGAAATaGACTAGATCTGCAGAGGAG +
Preference number: 4 (lower is better)
Translates to: PESQEGNADLRDHKGDTREAAWK*TRSAEE
Trigger: CTCCTCTGCAGATCTAGTGCATTTCCATGCTGCCTC...CCTGGTATCTCCCTTGTGGTCCCTGAGATCAGCGTTGCCCTCCTGGCTCTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR CCA 90 bp GAAGGCCCAGAGGCAGCATGGAAATGCACTAGATCTGCAGAGGAGGGGGCTGCAGACAAGCTGTGCCTCTaGCTCTCAGCACAGGAGTTA +
Preference number: 4 (lower is better)
Translates to: EGPEAAWKCTRSAEEGAADKLCL*LSAQEL
Trigger: TAACTCCTGTGCTGAGAGCCAGAGGCACAGCTTGTC...TGCAGCCCCCTCCTCTGCAGATCTAGTGCATTTCCATGCTGCCTCTGGGCCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR CCA 90 bp GCACTTTTGCAAAAGGGAGGTCTAGGACAAAGTAGGCCGGTGGCAGGTGCGGACGGCCCAGAGGCAGCATaGAAATGCACTAGATCTGCA +
Preference number: 4 (lower is better)
Translates to: ALLQKGGLGQSRPVAGADGPEAA*KCTRSA
Trigger: TGCAGATCTAGTGCATTTCCATGCTGCCTCTGGGCC...GTCCGCACCTGCCACCGGCCTACTTTGTCCTAGACCTCCCTTTTGCAAAAGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR CCA 90 bp AGCCCAAGGTGTGATAGCAGGGCCTGCCGTGTTCAGGAGCACACAGCAGCGTCCAGAACGTTCCACTTCTaGCTCCATAGACGTAAAAGC +
Preference number: 4 (lower is better)
Translates to: SPRCDSRACRVQEHTAASRTFHF*LHRRKS
Trigger: GCTTTTACGTCTATGGAGCCAGAAGTGGAACGTTCT...GGACGCTGCTGTGTGCTCCTGAACACGGCAGGCCCTGCTATCACACCTTGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636005.1
CDS-3UTR CCA 90 bp CTGCTGATGGTTTCTTCACAAAGCGACCTCTCCAGGGAACATCCGCAAATAAACGAGCTGGTGCCACCCTaGCAGAGCAGATGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: LLMVSSQSDLSREHPQINELVPP*QSRWLA
Trigger: AGCCAGCCATCTGCTCTGCCAGGGTGGCACCAGCTC...GTTTATTTGCGGATGTTCCCTGGAGAGGTCGCTTTGTGAAGAAACCATCAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS CCA 90 bp GGCTCCAGCCAGGGGCACCGGGGGCAGTGGGCGCTTGCCGGTGGGTaGCCTCGCAGCTCCAGAACGTGCCGCCTCTCTCCCGGCACAGCC +
Preference number: 5 (lower is better)
Translates to: GSSQGHRGQWALAGG*PRSSRTCRLSPGTA
Trigger: GGCTGTGCCGGGAGAGAGGCGGCACGTTCTGGAGCTGCGAGGCCACCCACCGGCAAGCGCCCACTGCCCCCGGTGCCCCTGGCTGGAGCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636657.1
CDS CCA 90 bp CTGTGCGCGGCCTCAGCTGCAGGACGGGAGCAGGCTGCCCCCTTGTaGTGCCCAAGCACCGCGCTGGCCCAGCGGGCACAGGCCGGAGGC +
Preference number: 5 (lower is better)
Translates to: LCAASAAGREQAAPL*CPSTALAQRAQAGG
Trigger: GCCTCCGGCCTGTGCCCGCTGGGCCAGCGCGGTGCTTGGGCACCACAAGGGGGCAGCCTGCTCCCGTCCTGCAGCTGAGGCCGCGCACAG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635935.1
CDS GCA 90 bp GCACCCAGGCTCTCCAGGAAGCGGCCCAGGCTCTCCTCGGGCTCCTaGCGGCAGTGGCACCAGGTGCCCAGCACGGCCACGCCCACCTGG +
Preference number: 5 (lower is better)
Translates to: APRLSRKRPRLSSGS*RQWHQVPSTATPTW
Trigger: CCAGGTGGGCGTGGCCGTGCTGGGCACCTGGTGCCACTGCCGGCAGGAGCCCGAGGAGAGCCTGGGCCGCTTCCTGGAGAGCCTGGGTGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000026218.9
ENST00000293874.2
ENST00000321878.10
ENST00000409527.6
ENST00000422307.6
ENST00000439574.1
ENST00000443147.5
ENST00000470411.2
ENST00000636657.1
CDS GCA 90 bp TGCGCGGCCTCAGCTGCAGGACGGGAGCAGGCTGCCCCCTTGTGGTaGCCAAGCACCGCGCTGGCCCAGCGGGCACAGGCCGGAGGCAGT +
Preference number: 5 (lower is better)
Translates to: CAASAAGREQAAPLW*PSTALAQRAQAGGS
Trigger: ACTGCCTCCGGCCTGTGCCCGCTGGGCCAGCGCGGTGCTTGGGCACCACAAGGGGGCAGCCTGCTCCCGTCCTGCAGCTGAGGCCGCGCA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635935.1
CDS CCA 90 bp CTCTCCAGGAAGCGGCCCAGGCTCTCCTCGGGCTCCTGCCGGCAGTaGCACCAGGTGCCCAGCACGGCCACGCCCACCTGGCTGGCCTGC +
Preference number: 5 (lower is better)
Translates to: LSRKRPRLSSGSCRQ*HQVPSTATPTWLAC
Trigger: GCAGGCCAGCCAGGTGGGCGTGGCCGTGCTGGGCACCTGGTGCCACTGCCGGCAGGAGCCCGAGGAGAGCCTGGGCCGCTTCCTGGAGAG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000026218.9
ENST00000293874.2
ENST00000321878.10
ENST00000409527.6
ENST00000422307.6
ENST00000439574.1
ENST00000443147.5
ENST00000470411.2
ENST00000636657.1
CDS CCA 90 bp GGTCCTCACCAGGGGCACCGGGGGCAGTGGGCGCTTGCCGGTGGGTaGCCTCGCAGCTCCAGAACGTGCCGCCTCTCTCCCGGCACAGCC +
Preference number: 5 (lower is better)
Translates to: GPHQGHRGQWALAGG*PRSSRTCRLSPGTA
Trigger: GGCTGTGCCGGGAGAGAGGCGGCACGTTCTGGAGCTGCGAGGCCACCCACCGGCAAGCGCCCACTGCCCCCGGTGCCCCTGGTGAGGACC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000026218.9
ENST00000293874.2
ENST00000321878.10
ENST00000409527.6
ENST00000422307.6
ENST00000443147.5
ENST00000470411.2
CDS CCA 90 bp TGGTGGCTCCAGCCAGGGGCACCGGGGGCAGTGGGCGCTTGCCGGTaGGTGGCCTCGCAGCTCCAGAACGTGCCGCCTCTCTCCCGGCAC +
Preference number: 5 (lower is better)
Translates to: WWLQPGAPGAVGACR*VASQLQNVPPLSRH
Trigger: GTGCCGGGAGAGAGGCGGCACGTTCTGGAGCTGCGAGGCCACCCACCGGCAAGCGCCCACTGCCCCCGGTGCCCCTGGCTGGAGCCACCA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636657.1
CDS-3UTR CAA 90 bp GCGGAGGGGCCTGCCGGCCTCGTGCCGGAGGACACGGAACTTCACGCCAGCCGCGCGCCCCAGGAGTGCTaGGGGTGGCAGCCACAGCTG +
Preference number: 5 (lower is better)
Translates to: AEGPAGLVPEDTELHASRAPQEC*GWQPQL
Trigger: CAGCTGTGGCTGCCACCCCAAGCACTCCTGGGGCGC...GCGGCTGGCGTGAAGTTCCGTGTCCTCCGGCACGAGGCCGGCAGGCCCCTCCGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS GCA 90 bp GGGCAGTGGGCGCTTGCCGGTGGGTGGCCTCGCAGCTCCAGAACGTaGCGCCTCTCTCCCGGCACAGCCGCAGCCAGGGCTCATGGGGGA +
Preference number: 5 (lower is better)
Translates to: GQWALAGGWPRSSRT*RLSPGTAAARAHGG
Trigger: TCCCCCATGAGCCCTGGCTGCGGCTGTGCCGGGAGAGAGGCGGCACGTTCTGGAGCTGCGAGGCCACCCACCGGCAAGCGCCCACTGCCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000026218.9
ENST00000293874.2
ENST00000321878.10
ENST00000409527.6
ENST00000422307.6
ENST00000443147.5
ENST00000470411.2
ENST00000635909.1
ENST00000636657.1
CDS GCA 90 bp TGGCAGTGGTGGCTCCAGCCAGGGGCACCGGGGGCAGTGGGCGCTTaGCGGTGGGTGGCCTCGCAGCTCCAGAACGTGCCGCCTCTCTCC +
Preference number: 5 (lower is better)
Translates to: WQWWLQPGAPGAVGA*RWVASQLQNVPPLS
Trigger: GGAGAGAGGCGGCACGTTCTGGAGCTGCGAGGCCACCCACCGGCAAGCGCCCACTGCCCCCGGTGCCCCTGGCTGGAGCCACCACTGCCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636657.1
CDS GCA 90 bp TTCCCAGGGCCTGTGCGCGGCCTCAGCTGCAGGACGGGAGCAGGCTaGCCCCTTGTGGTGCCCAAGCACCGCGCTGGCCCAGCGGGCACA +
Preference number: 5 (lower is better)
Translates to: FPGPVRGLSCRTGAG*PLVVPKHRAGPAGT
Trigger: TGTGCCCGCTGGGCCAGCGCGGTGCTTGGGCACCACAAGGGGGCAGCCTGCTCCCGTCCTGCAGCTGAGGCCGCGCACAGGCCCTGGGAA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635935.1
CDS GCA 90 bp ACCGGGCATCAGCAGGACCCCGCGCCCAGGGACGGCCCAGCACTGTaGCCTCCCCCATCCCGGAGCTGCAGTCGGGACCTTGCGGCTTCC +
Preference number: 5 (lower is better)
Translates to: TGHQQDPAPRDGPAL*PPPSRSCSRDLAAS
Trigger: GGAAGCCGCAAGGTCCCGACTGCAGCTCCGGGATGGGGGAGGGCACAGTGCTGGGCCGTCCCTGGGCGCGGGGTCCTGCTGATGCCCGGT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635935.1
CDS CCA 90 bp ACCTGGTCCTCACCAGGGGCACCGGGGGCAGTGGGCGCTTGCCGGTaGGTGGCCTCGCAGCTCCAGAACGTGCCGCCTCTCTCCCGGCAC +
Preference number: 5 (lower is better)
Translates to: TWSSPGAPGAVGACR*VASQLQNVPPLSRH
Trigger: GTGCCGGGAGAGAGGCGGCACGTTCTGGAGCTGCGAGGCCACCCACCGGCAAGCGCCCACTGCCCCCGGTGCCCCTGGTGAGGACCAGGT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000026218.9
ENST00000293874.2
ENST00000321878.10
ENST00000409527.6
ENST00000422307.6
ENST00000443147.5
ENST00000470411.2
CDS-3UTR CAA 90 bp GAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGAGGACACGGAACTTCACGCCAGCTCAGTGGGCGGGCCCTaGACACTGAGGCTGCTCCCG +
Preference number: 5 (lower is better)
Translates to: EAEGPAGLVPEDTELHASSVGGP*TLRLLP
Trigger: CGGGAGCAGCCTCAGTGTCAAGGGCCCGCCCACTGA...GCTGGCGTGAAGTTCCGTGTCCTCCGGCACGAGGCCGGCAGGCCCCTCCGCCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635909.1
ENST00000636657.1
CDS GCA 90 bp AGCATGACCTGGTCCTCACCAGGGGCACCGGGGGCAGTGGGCGCTTaGCGGTGGGTGGCCTCGCAGCTCCAGAACGTGCCGCCTCTCTCC +
Preference number: 5 (lower is better)
Translates to: SMTWSSPGAPGAVGA*RWVASQLQNVPPLS
Trigger: GGAGAGAGGCGGCACGTTCTGGAGCTGCGAGGCCACCCACCGGCAAGCGCCCACTGCCCCCGGTGCCCCTGGTGAGGACCAGGTCATGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000026218.9
ENST00000293874.2
ENST00000321878.10
ENST00000409527.6
ENST00000422307.6
ENST00000443147.5
ENST00000470411.2
CDS GCA 90 bp GTCCTCAGGCCCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTaGCGGAGGACACGGAACTTCACGCCAGTGGATGGTGGCCGCCCT +
Preference number: 5 (lower is better)
Translates to: VLRPCIRRRRGLPAS*RRTRNFTPVDGGRP
Trigger: AGGGCGGCCACCATCCACTGGCGTGAAGTTCCGTGTCCTCCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGGGCCTGAGGAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420990.6
CDS GCA 90 bp CGAAGCTCTCCCCGCCCCCTCCGTCGCCCAACTCCTGGAGCTGGCTaGCAGGCCGGCATCAAAGCCTCCTGCAGCCAGGCACGGTGGCTC +
Preference number: 5 (lower is better)
Translates to: RSSPRPLRRPTPGAG*QAGIKASCSQARWL
Trigger: GAGCCACCGTGCCTGGCTGCAGGAGGCTTTGATGCCGGCCTGGCAGCCAGCTCCAGGAGTTGGGCGACGGAGGGGGCGGGGAGAGCTTCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476438.1
CDS GCA 90 bp GGGCCTGCCGGCCTCGTGCCGGAGGACACGGAACTTCACGCCAGCTaGAAGGATAGCAAGCGGCTGACGAGGGGACGCGTGGGGGCTGGC +
Preference number: 5 (lower is better)
Translates to: GPAGLVPEDTELHAS*KDSKRLTRGRVGAG
Trigger: GCCAGCCCCCACGCGTCCCCTCGTCAGCCGCTTGCTATCCTTGCAGCTGGCGTGAAGTTCCGTGTCCTCCGGCACGAGGCCGGCAGGCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476438.1
CDS GCA 90 bp GGGCCAGAGCTTGAACACTCAGGGGCACCGGGGGCAGTGGGCGCTTaGCGGTGGGTGGCCTCGCAGCTCCAGAACGTGCCGCCTCTCTCC +
Preference number: 5 (lower is better)
Translates to: GPELEHSGAPGAVGA*RWVASQLQNVPPLS
Trigger: GGAGAGAGGCGGCACGTTCTGGAGCTGCGAGGCCACCCACCGGCAAGCGCCCACTGCCCCCGGTGCCCCTGAGTGTTCAAGCTCTGGCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635909.1
CDS CCA 90 bp TTGAACACTCAGGGGCACCGGGGGCAGTGGGCGCTTGCCGGTGGGTaGCCTCGCAGCTCCAGAACGTGCCGCCTCTCTCCCGGCACAGCC +
Preference number: 5 (lower is better)
Translates to: LNTQGHRGQWALAGG*PRSSRTCRLSPGTA
Trigger: GGCTGTGCCGGGAGAGAGGCGGCACGTTCTGGAGCTGCGAGGCCACCCACCGGCAAGCGCCCACTGCCCCCGGTGCCCCTGAGTGTTCAA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635909.1
CDS CCA 90 bp GAGCTTGAACACTCAGGGGCACCGGGGGCAGTGGGCGCTTGCCGGTaGGTGGCCTCGCAGCTCCAGAACGTGCCGCCTCTCTCCCGGCAC +
Preference number: 5 (lower is better)
Translates to: ELEHSGAPGAVGACR*VASQLQNVPPLSRH
Trigger: GTGCCGGGAGAGAGGCGGCACGTTCTGGAGCTGCGAGGCCACCCACCGGCAAGCGCCCACTGCCCCCGGTGCCCCTGAGTGTTCAAGCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635909.1
CDS-3UTR CAA 90 bp CAGTGTCCTCAGGCCCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGCTAGTGCCTCTGACTTaGCCGCGCTTGGCCCCTGGC +
Preference number: 5 (lower is better)
Translates to: QCPQALHQEAEGPAGLVPLVPLT*PRLAPG
Trigger: GCCAGGGGCCAAGCGCGGCAAAGTCAGAGGCACTAG...CGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGGGCCTGAGGACACTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420990.6
CDS TCA 90 bp GGCCTCGCCCACTCCAGAGCGCAGCACTCACTGCCCAGAGGGTCCTaGAAGGCCACCCACGTGGCCTGCAGCAGGAGACAGCCCGCCCCA +
Preference number: 5 (lower is better)
Translates to: GLAHSRAQHSLPRGS*KATHVACSRRQPAP
Trigger: TGGGGCGGGCTGTCTCCTGCTGCAGGCCACGTGGGTGGCCTTTCAGGACCCTCTGGGCAGTGAGTGCTGCGCTCTGGAGTGGGCGAGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480424.6
CDS GCA 90 bp GGGATGAAGGGAAAGTGCAGGACCGCCAGGACCACGGCGCTGCTCTaGTCCGGCACCCACCGTCCCACCAGCAGCCCGCTGTCCGTCGAG +
Preference number: 5 (lower is better)
Translates to: GMKGKCRTARTTALL*SGTHRPTSSPLSVE
Trigger: CTCGACGGACAGCGGGCTGCTGGTGGGACGGTGGGTGCCGGAGCAGAGCAGCGCCGTGGTCCTGGCGGTCCTGCACTTTCCCTTCATCCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000026218.9
ENST00000293874.2
ENST00000321878.10
ENST00000409527.6
ENST00000422307.6
ENST00000439574.1
ENST00000443147.5
ENST00000470411.2
ENST00000636657.1
CDS CCA 90 bp CAGAACGTGCCGCCTCTCTCCCGGCACAGCCGCAGCCAGGGCTCATaGGGGAAGACAGCACCCAGGCTCTCCAGGAAGCGGCCCAGGCTC +
Preference number: 5 (lower is better)
Translates to: QNVPPLSRHSRSQGS*GKTAPRLSRKRPRL
Trigger: GAGCCTGGGCCGCTTCCTGGAGAGCCTGGGTGCTGTCTTCCCCCATGAGCCCTGGCTGCGGCTGTGCCGGGAGAGAGGCGGCACGTTCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000026218.9
ENST00000293874.2
ENST00000321878.10
ENST00000409527.6
ENST00000422307.6
ENST00000439574.1
ENST00000443147.5
ENST00000470411.2
ENST00000636657.1
CDS-3UTR CAA 90 bp CGTGCCGTCTGGCAGGCACTTTCGGCCTCAGTGCCACGGCCCCCTCCCCAGGCCGACAGGGGCCAGAGCTaGAACACTCGGCAGGCACTG +
Preference number: 5 (lower is better)
Translates to: RAVWQALSASVPRPPPQADRGQS*NTRQAL
Trigger: CAGTGCCTGCCGAGTGTTCAAGCTCTGGCCCCTGTC...GGCCTGGGGAGGGGGCCGTGGCACTGAGGCCGAAAGTGCCTGCCAGACGGCACG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000636657.1
CDS-3UTR CAA 90 bp GTGCCGTCTGGCAGGCACTTTCGGCCTCAGTGCCACGGCCCCCTCCCCAGGCCAAGTGCACGGTTCATCTaGAGCCCGGCGGGAGCACCC +
Preference number: 5 (lower is better)
Translates to: VPSGRHFRPQCHGPLPRPSARFI*SPAGAP
Trigger: GGGTGCTCCCGCCGGGCTCAAGATGAACCGTGCACT...TGGCCTGGGGAGGGGGCCGTGGCACTGAGGCCGAAAGTGCCTGCCAGACGGCAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CAA 90 bp GGTGCTGCTGAGATGGGCGCTGCCTCCTCCCACCCACAGCGCGTCATCCCCTCAGCGCCCCAGGAGTGCTaGGGGTGGCAGCCACAGCTG +
Preference number: 5 (lower is better)
Translates to: GAAEMGAASSHPQRVIPSAPQEC*GWQPQL
Trigger: CAGCTGTGGCTGCCACCCCAAGCACTCCTGGGGCGC...TGAGGGGATGACGCGCTGTGGGTGGGAGGAGGCAGCGCCCATCTCAGCAGCACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CAA 90 bp TGGGTTTATCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGAGGACGCGCCCCAGGAGTGCTaGGGGTGGCAGCCACAGCTG +
Preference number: 5 (lower is better)
Translates to: WVYLHQEAEGPAGLVPEDAPQEC*GWQPQL
Trigger: CAGCTGTGGCTGCCACCCCAAGCACTCCTGGGGCGC...GTCCTCCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGATAAACCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000443147.5
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR CAA 90 bp GAAGCGGGTCCCAAGGCAGGCAGTGCCAGTGATGGAGTGCGGCCAGCCTGGCTGGCGCCCCAGGAGTGCTaGGGGTGGCAGCCACAGCTG +
Preference number: 5 (lower is better)
Translates to: EAGPKAGSASDGVRPAWLAPQEC*GWQPQL
Trigger: CAGCTGTGGCTGCCACCCCAAGCACTCCTGGGGCGC...CAGCCAGGCTGGCCGCACTCCATCACTGGCACTGCCTGCCTTGGGACCCGCTTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321878.10
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR CAA 90 bp GGCTCCCCTCCTGAAGCGGACTCGGGCTCACAGGGAACACCCGCACCCAGACCGTCCCCAAGGAACAGCTaGCGGCACAGGGCGCCCCAG +
Preference number: 5 (lower is better)
Translates to: GSPPEADSGSQGTPAPRPSPRNS*RHRAPQ
Trigger: CTGGGGCGCCCTGTGCCGCAAGCTGTTCCTTGGGGA...CGGTCTGGGTGCGGGTGTTCCCTGTGAGCCCGAGTCCGCTTCAGGAGGGGAGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CAA 90 bp ATCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGAGGACACGGAACTCCCCAAGGAACAGCTaGCGGCACAGGGCGCCCCAG +
Preference number: 5 (lower is better)
Translates to: ICIRRRRGLPASCRRTRNSPRNS*RHRAPQ
Trigger: CTGGGGCGCCCTGTGCCGCAAGCTGTTCCTTGGGGA...GTTCCGTGTCCTCCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000443147.5
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR CAA 90 bp CCACACCAGTGTCCTCAGGCCCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCCTGACTTTGCCGCGCTaGGCCCCTGGCCTGCAGTTC +
Preference number: 5 (lower is better)
Translates to: PHQCPQALHQEAEGPAGLLTLPR*APGLQF
Trigger: GAACTGCAGGCCAGGGGCCAAGCGCGGCAAAGTCAG...GAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGGGCCTGAGGACACTGGTGTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420990.6
CDS-3UTR CAA 90 bp CCCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGAGGACACGGAACTGTTCCACCCAGAACTaGAGCCCTGTGGGGCCCAGG +
Preference number: 5 (lower is better)
Translates to: PCIRRRRGLPASCRRTRNCSTQN*SPVGPR
Trigger: CCTGGGCCCCACAGGGCTCAAGTTCTGGGTGGAACA...GTTCCGTGTCCTCCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420990.6
CDS CCA 90 bp CCCACCTGGCTGGCCTGCCGCACCTGGGCCAGGAGCTGCTTGACCTaGATGGGGATGAAGGGAAAGTGCAGGACCGCCAGGACCACGGCG +
Preference number: 5 (lower is better)
Translates to: PTWLACRTWARSCLT*MGMKGKCRTARTTA
Trigger: CGCCGTGGTCCTGGCGGTCCTGCACTTTCCCTTCATCCCCATCCAGGTCAAGCAGCTCCTGGCCCAGGTGCGGCAGGCCAGCCAGGTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000026218.9
ENST00000293874.2
ENST00000321878.10
ENST00000409527.6
ENST00000422307.6
ENST00000439574.1
ENST00000443147.5
ENST00000470411.2
ENST00000636657.1
CDS CCA 90 bp CAGGTGCCCAGCACGGCCACGCCCACCTGGCTGGCCTGCCGCACCTaGGCCAGGAGCTGCTTGACCTGGATGGGGATGAAGGGAAAGTGC +
Preference number: 5 (lower is better)
Translates to: QVPSTATPTWLACRT*ARSCLTWMGMKGKC
Trigger: GCACTTTCCCTTCATCCCCATCCAGGTCAAGCAGCTCCTGGCCCAGGTGCGGCAGGCCAGCCAGGTGGGCGTGGCCGTGCTGGGCACCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000026218.9
ENST00000293874.2
ENST00000321878.10
ENST00000409527.6
ENST00000422307.6
ENST00000439574.1
ENST00000443147.5
ENST00000470411.2
ENST00000636657.1
CDS CCA 90 bp AGCAGGAGACAGCCCGCCCCACAGCTGACTGCTCCCAGGCAGCGCTaGCAGAAGCCACACAGAGCACTGCAGCCAGGCCCAGCCTGTGGG +
Preference number: 5 (lower is better)
Translates to: SRRQPAPQLTAPRQR*QKPHRALQPGPACG
Trigger: CCCACAGGCTGGGCCTGGCTGCAGTGCTCTGTGTGGCTTCTGCCAGCGCTGCCTGGGAGCAGTCAGCTGTGGGGCGGGCTGTCTCCTGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480424.6
CDS CCA 90 bp AGCTGTGGCAGAGGAGCATTTAGGACCGGCCCGGCCAGACGCGCCTaGGGGCAGAGCAGTCCGACCCCATCCTGGGCCACGATGAAGGGG +
Preference number: 5 (lower is better)
Translates to: SCGRGAFRTGPARRA*GQSSPTPSWATMKG
Trigger: CCCCTTCATCGTGGCCCAGGATGGGGTCGGACTGCTCTGCCCCCAGGCGCGTCTGGCCGGGCCGGTCCTAAATGCTCCTCTGCCACAGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480424.6
CDS-3UTR CAA 90 bp CCTGGTGCTGCTGAGATGGGCGCTGCCTCCTCCCACCCACAGCGCGTCATCCCCAGTGCACGGTTCATCTaGAGCCCGGCGGGAGCACCC +
Preference number: 5 (lower is better)
Translates to: PGAAEMGAASSHPQRVIPSARFI*SPAGAP
Trigger: GGGTGCTCCCGCCGGGCTCAAGATGAACCGTGCACT...GGGGATGACGCGCTGTGGGTGGGAGGAGGCAGCGCCCATCTCAGCAGCACCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CAA 90 bp GGACCTGCTGCTACGGGGCACCGTGGACGAATAGGTACGGCTGGGTCAGTGGGCGCGCCCCAGGAGTGCTaGGGGTGGCAGCCACAGCTG +
Preference number: 5 (lower is better)
Translates to: GPAATGHRGRIGTAGSVGAPQEC*GWQPQL
Trigger: CAGCTGTGGCTGCCACCCCAAGCACTCCTGGGGCGC...GCCCACTGACCCAGCCGTACCTATTCGTCCACGGTGCCCCGTAGCAGCAGGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CAA 90 bp AGAGCAGATGGCTGGCTGTGGCCGTGTGGTGGTGCCAGGCGAGCCAGCAGTTCCGCGCCCCAGGAGTGCTaGGGGTGGCAGCCACAGCTG +
Preference number: 5 (lower is better)
Translates to: RADGWLWPCGGARRASSSAPQEC*GWQPQL
Trigger: CAGCTGTGGCTGCCACCCCAAGCACTCCTGGGGCGC...GGAACTGCTGGCTCGCCTGGCACCACCACACGGCCACAGCCAGCCATCTGCTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000321878.10
ENST00000443147.5
ENST00000540241.1
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR CAA 90 bp ACTTCACGCCAGCCGCCAGCCTGTAGGGCCGGCAGAGCCGAAGACCCAGTGAGTGCGCCCCAGGAGTGCTaGGGGTGGCAGCCACAGCTG +
Preference number: 5 (lower is better)
Translates to: TSRQPPACRAGRAEDPVSAPQEC*GWQPQL
Trigger: CAGCTGTGGCTGCCACCCCAAGCACTCCTGGGGCGC...ACTCACTGGGTCTTCGGCTCTGCCGGCCCTACAGGCTGGCGGCTGGCGTGAAGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR CAA 90 bp ACGGAACTTCACGCCAGCCGCCAGCCTGTAGGGCCGGCAGAGCCGAAGACCCAGTCAGTGGGCGGGCCCTaGACACTGAGGCTGCTCCCG +
Preference number: 5 (lower is better)
Translates to: TELHASRQPVGPAEPKTQSVGGP*TLRLLP
Trigger: CGGGAGCAGCCTCAGTGTCAAGGGCCCGCCCACTGA...CTGGGTCTTCGGCTCTGCCGGCCCTACAGGCTGGCGGCTGGCGTGAAGTTCCGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635909.1
ENST00000636657.1
CDS GCA 90 bp CAGGGACCCCACCCTGAGCAGGGCACGGAGTCTGCCATTGGGCCTTaGTCTGGAGCAAAGCTGGAGGCGGAGCACCCGGCCCTCTCACCA +
Preference number: 5 (lower is better)
Translates to: QGPHPEQGTESAIGP*SGAKLEAEHPALSP
Trigger: TGGTGAGAGGGCCGGGTGCTCCGCCTCCAGCTTTGCTCCAGAGCAAGGCCCAATGGCAGACTCCGTGCCCTGCTCAGGGTGGGGTCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480424.6
CDS-3UTR CAA 90 bp CACCCGGGACACCGGGCTCCACCCCAGTCCACTCACGTCAGCCACAGGAACGAGGTGGGGAAGAAGGCCTaGAGCACCATGCCGGGAGGC +
Preference number: 5 (lower is better)
Translates to: HPGHRAPPQSTHVSHRNEVGKKA*STMPGG
Trigger: GCCTCCCGGCATGGTGCTCAAGGCCTTCTTCCCCAC...CTCGTTCCTGTGGCTGACGTGAGTGGACTGGGGTGGAGCCCGGTGTCCCGGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470411.2
CDS-3UTR CAA 90 bp TCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGAGGACACGGAACTGACAGGGGCCAGAGCTaGAACACTCGGCAGGCACTG +
Preference number: 5 (lower is better)
Translates to: SASGGGGACRPRAGGHGTDRGQS*NTRQAL
Trigger: CAGTGCCTGCCGAGTGTTCAAGCTCTGGCCCCTGTC...AGTTCCGTGTCCTCCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000443147.5
ENST00000636005.1
ENST00000636657.1
ENST00000637468.1
CDS-3UTR CAA 90 bp GGCCTCGTGCCGGAGGACACGGAACTTCACGCCAGCCGCCAGCCTGTAGGGCCGTCGCACGTGGAGAGTTaGCTCCCGAGGAAGGACAGG +
Preference number: 5 (lower is better)
Translates to: GLVPEDTELHASRQPVGPSHVES*LPRKDR
Trigger: CCTGTCCTTCCTCGGGAGCAAACTCTCCACGTGCGA...CGGCCCTACAGGCTGGCGGCTGGCGTGAAGTTCCGTGTCCTCCGGCACGAGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
ENST00000637468.1
CDS-3UTR CAA 90 bp TGGGTTTATCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGAGGACAGTGCACGGTTCATCTaGAGCCCGGCGGGAGCACCC +
Preference number: 5 (lower is better)
Translates to: WVYLHQEAEGPAGLVPEDSARFI*SPAGAP
Trigger: GGGTGCTCCCGCCGGGCTCAAGATGAACCGTGCACT...GTCCTCCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGATAAACCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000443147.5
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
ENST00000637468.1
CDS-3UTR CAA 90 bp CACGGAACTTCACGCCAGCCGCCAGCCTGTAGGGCCGGCAGAGCCGAAGACCCAAGTGCACGGTTCATCTaGAGCCCGGCGGGAGCACCC +
Preference number: 5 (lower is better)
Translates to: HGTSRQPPACRAGRAEDPSARFI*SPAGAP
Trigger: GGGTGCTCCCGCCGGGCTCAAGATGAACCGTGCACT...TGGGTCTTCGGCTCTGCCGGCCCTACAGGCTGGCGGCTGGCGTGAAGTTCCGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
ENST00000637468.1
CDS-3UTR CAA 90 bp CCCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGAGGACACGGAACTACAGCGGCAGGGAGTaGATGAGGTCCACGAGCAGA +
Preference number: 5 (lower is better)
Translates to: PCIRRRRGLPASCRRTRNYSGRE*MRSTSR
Trigger: TCTGCTCGTGGACCTCATCAACTCCCTGCCGCTGTA...GTTCCGTGTCCTCCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420990.6
CDS-3UTR CAA 90 bp CAGGGAACACCCGCACCCAGACCGTGCCGTCTGGCAGGCACTTTCGGCCTCAGTTCCCCAAGGAACAGCTaGCGGCACAGGGCGCCCCAG +
Preference number: 5 (lower is better)
Translates to: QGTPAPRPCRLAGTFGLSSPRNS*RHRAPQ
Trigger: CTGGGGCGCCCTGTGCCGCAAGCTGTTCCTTGGGGA...ACTGAGGCCGAAAGTGCCTGCCAGACGGCACGGTCTGGGTGCGGGTGTTCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS GCA 90 bp ACCTGGGCCAGGAGCTGCTTGACCTGGATGGGGATGAAGGGAAAGTaGAGGACCGCCAGGACCACGGCGCTGCTCTGCTCCGGCACCCAC +
Preference number: 5 (lower is better)
Translates to: TWARSCLTWMGMKGK*RTARTTALLCSGTH
Trigger: GTGGGTGCCGGAGCAGAGCAGCGCCGTGGTCCTGGCGGTCCTGCACTTTCCCTTCATCCCCATCCAGGTCAAGCAGCTCCTGGCCCAGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000026218.9
ENST00000293874.2
ENST00000321878.10
ENST00000409527.6
ENST00000422307.6
ENST00000439574.1
ENST00000443147.5
ENST00000470411.2
ENST00000636657.1
CDS GCA 90 bp AGTGGGTTTATCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTaGCGGAGGACACGGAACTTCACGCCAGTGGATGGTGGCCGCCCT +
Preference number: 5 (lower is better)
Translates to: SGFICIRRRRGLPAS*RRTRNFTPVDGGRP
Trigger: AGGGCGGCCACCATCCACTGGCGTGAAGTTCCGTGTCCTCCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGATAAACCCACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443147.5
CDS GCA 90 bp GCAAAGCTGGAGGCGGAGCACCCGGCCCTCTCACCAGGTCAGAGGTaGCTCCCCACAGCCTCACATGCAGAGGGGATCGAGGCCTGGGAA +
Preference number: 5 (lower is better)
Translates to: AKLEAEHPALSPGQR*LPTASHAEGIEAWE
Trigger: TTCCCAGGCCTCGATCCCCTCTGCATGTGAGGCTGTGGGGAGGCACCTCTGACCTGGTGAGAGGGCCGGGTGCTCCGCCTCCAGCTTTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480424.6
CDS GCA 90 bp AGCGGGCACAGGCCGGAGGCAGTCAGCCCCTCCAGCCACGAACCCTaGCCCATACCTGGTCCAGGTCATAGGAACAGGAGTCCACGCGCT +
Preference number: 5 (lower is better)
Translates to: SGHRPEAVSPSSHEP*PIPGPGHRNRSPRA
Trigger: AGCGCGTGGACTCCTGTTCCTATGACCTGGACCAGGTATGGGGCAGGGTTCGTGGCTGGAGGGGCTGACTGCCTCCGGCCTGTGCCCGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635935.1
CDS GCA 90 bp ACACCGCAGACTTATCTATTCCCAGGGCCTGTGCGCGGCCTCAGCTaGAGGACGGGAGCAGGCTGCCCCCTTGTGGTGCCCAAGCACCGC +
Preference number: 5 (lower is better)
Translates to: TPQTYLFPGPVRGLS*RTGAGCPLVVPKHR
Trigger: GCGGTGCTTGGGCACCACAAGGGGGCAGCCTGCTCCCGTCCTGCAGCTGAGGCCGCGCACAGGCCCTGGGAATAGATAAGTCTGCGGTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635935.1
CDS GCA 90 bp CCCAGCACTGTGCCCTCCCCCATCCCGGAGCTGCAGTCGGGACCTTaGGGCTTCCTGAGGGAACTCGGGATGGCCTGCTCAGAAGCAGTC +
Preference number: 5 (lower is better)
Translates to: PSTVPSPIPELQSGP*GFLRELGMACSEAV
Trigger: GACTGCTTCTGAGCAGGCCATCCCGAGTTCCCTCAGGAAGCCGCAAGGTCCCGACTGCAGCTCCGGGATGGGGGAGGGCACAGTGCTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635935.1
CDS CCA 90 bp CCGTGCTGGCAGTGGTGGCTCCAGCCTGGCGGTCGGGCAGGACGGTaGGCAGGTGTAGCTGTGACAGCAACACCTGGCGCTGGTCATAGA +
Preference number: 5 (lower is better)
Translates to: PCWQWWLQPGGRAGR*AGVAVTATPGAGHR
Trigger: TCTATGACCAGCGCCAGGTGTTGCTGTCACAGCTACACCTGCCCACCGTCCTGCCCGACCGCCAGGCTGGAGCCACCACTGCCAGCACGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000409527.6
ENST00000422307.6
ENST00000443147.5
ENST00000470411.2
CDS CCA 90 bp AGCAGGGCACGGAGTCTGCCATTGGGCCTTGCTCTGGAGCAAAGCTaGAGGCGGAGCACCCGGCCCTCTCACCAGGTCAGAGGTGCCTCC +
Preference number: 5 (lower is better)
Translates to: SRARSLPLGLALEQS*RRSTRPSHQVRGAS
Trigger: GGAGGCACCTCTGACCTGGTGAGAGGGCCGGGTGCTCCGCCTCCAGCTTTGCTCCAGAGCAAGGCCCAATGGCAGACTCCGTGCCCTGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480424.6
CDS-3UTR CAA 90 bp AGTCCTGGTGCTGCTGAGATGGGCGCTGCCTCCTCCCACCCACAGCGCGTCATCGTGGGGAAGAAGGCCTaGAGCACCATGCCGGGAGGC +
Preference number: 5 (lower is better)
Translates to: SPGAAEMGAASSHPQRVIVGKKA*STMPGG
Trigger: GCCTCCCGGCATGGTGCTCAAGGCCTTCTTCCCCAC...GATGACGCGCTGTGGGTGGGAGGAGGCAGCGCCCATCTCAGCAGCACCAGGACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000636657.1
CDS-3UTR CAA 90 bp AGCAGATGGCTGGCTGTGGCCGTGTGGTGGTGCCAGGCGAGCCAGCAGTTCCCTGTGGGGAAGAAGGCCTaGAGCACCATGCCGGGAGGC +
Preference number: 5 (lower is better)
Translates to: SRWLAVAVWWCQASQQFPVGKKA*STMPGG
Trigger: GCCTCCCGGCATGGTGCTCAAGGCCTTCTTCCCCAC...AGGGAACTGCTGGCTCGCCTGGCACCACCACACGGCCACAGCCAGCCATCTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443147.5
ENST00000636657.1
CDS-3UTR CAA 90 bp CACCCGCACCCAGACCGTGCCGTCTGGCAGGCACTTTCGGCCTCAGTGCCACGGTGGGCCAGGAGCTGCTaGACCTGGATGGGGATGAAG +
Preference number: 5 (lower is better)
Translates to: HPHPDRAVWQALSASVPRWARSC*TWMGMK
Trigger: CTTCATCCCCATCCAGGTCAAGCAGCTCCTGGCCCA...CCGTGGCACTGAGGCCGAAAGTGCCTGCCAGACGGCACGGTCTGGGTGCGGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000636657.1
CDS-3UTR CAA 90 bp CAGGCAGTCCTGGTGCTGCTGAGATGGGCGCTGCCTCCTCCCACCCACAGCGCGTGGGCCAGGAGCTGCTaGACCTGGATGGGGATGAAG +
Preference number: 5 (lower is better)
Translates to: QAVLVLLRWALPPPTHSAWARSC*TWMGMK
Trigger: CTTCATCCCCATCCAGGTCAAGCAGCTCCTGGCCCA...CGCGCTGTGGGTGGGAGGAGGCAGCGCCCATCTCAGCAGCACCAGGACTGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000636657.1
CDS-3UTR CAA 90 bp GAAGCGGACTCGGGCTCACAGGGAACACCCGCACCCAGACCGTGCCGTCTGGCAGACAGGGGCCAGAGCTaGAACACTCGGCAGGCACTG +
Preference number: 5 (lower is better)
Translates to: EADSGSQGTPAPRPCRLADRGQS*NTRQAL
Trigger: CAGTGCCTGCCGAGTGTTCAAGCTCTGGCCCCTGTC...TGCCAGACGGCACGGTCTGGGTGCGGGTGTTCCCTGTGAGCCCGAGTCCGCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000636657.1
CDS-3UTR CAA 90 bp GAAGCGGGTCCCAAGGCAGGCAGTGCCAGTGATGGAGTGCGGCCAGCCTGGCTGGACAGGGGCCAGAGCTaGAACACTCGGCAGGCACTG +
Preference number: 5 (lower is better)
Translates to: EAGPKAGSASDGVRPAWLDRGQS*NTRQAL
Trigger: CAGTGCCTGCCGAGTGTTCAAGCTCTGGCCCCTGTC...CAGCCAGGCTGGCCGCACTCCATCACTGGCACTGCCTGCCTTGGGACCCGCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321878.10
ENST00000636005.1
ENST00000636657.1
CDS-3UTR CAA 90 bp CATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGAGGACACGGAACTTCACACAGAGGCCACCGTGTaGGCCTTCCTCATCAGCTGG +
Preference number: 5 (lower is better)
Translates to: HQEAEGPAGLVPEDTELHTEATV*AFLISW
Trigger: CCAGCTGATGAGGAAGGCCAACACGGTGGCCTCTGT...GTGAAGTTCCGTGTCCTCCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
ENST00000637468.1
CDS-3UTR CAA 90 bp AGAGCAGATGGCTGGCTGTGGCCGTGTGGTGGTGCCAGGCGAGCCAGCAGTTCCAGTGCACGGTTCATCTaGAGCCCGGCGGGAGCACCC +
Preference number: 5 (lower is better)
Translates to: RADGWLWPCGGARRASSSSARFI*SPAGAP
Trigger: GGGTGCTCCCGCCGGGCTCAAGATGAACCGTGCACT...GGAACTGCTGGCTCGCCTGGCACCACCACACGGCCACAGCCAGCCATCTGCTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321878.10
ENST00000443147.5
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR CAA 90 bp CCAAGCCCAAGGTGTGATAGCAGGGCCTGCCGTGTTCAGGAGCACACAGCAGCGGCGCCCCAGGAGTGCTaGGGGTGGCAGCCACAGCTG +
Preference number: 5 (lower is better)
Translates to: PSPRCDSRACRVQEHTAAAPQEC*GWQPQL
Trigger: CAGCTGTGGCTGCCACCCCAAGCACTCCTGGGGCGC...CGCTGCTGTGTGCTCCTGAACACGGCAGGCCCTGCTATCACACCTTGGGCTTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000321878.10
ENST00000540241.1
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR CAA 90 bp ATGGAGTGCGGCCAGCCTGGCTGGCCACCCCCACATCTGCTCACTCCCAATGACTCCCCAAGGAACAGCTaGCGGCACAGGGCGCCCCAG +
Preference number: 5 (lower is better)
Translates to: MECGQPGWPPPHLLTPNDSPRNS*RHRAPQ
Trigger: CTGGGGCGCCCTGTGCCGCAAGCTGTTCCTTGGGGA...GTCATTGGGAGTGAGCAGATGTGGGGGTGGCCAGCCAGGCTGGCCGCACTCCAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000321878.10
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR CAA 90 bp TGGGTTTATCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTGCCGGAGGACTCTGGACACCTGGGGTaGCTGTGCTCGCCACCATGG +
Preference number: 5 (lower is better)
Translates to: WVYLHQEAEGPAGLVPEDSGHLG*LCSPPW
Trigger: CCATGGTGGCGAGCACAGCAACCCCAGGTGTCCAGA...GTCCTCCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGATAAACCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR CAA 90 bp AGAGCAGATGGCTGGCTGTGGCCGTGTGGTGGTGCCAGGCGAGCCAGCAGTTCCCTGACTTTGCCGCGCTaGGCCCCTGGCCTGCAGTTC +
Preference number: 5 (lower is better)
Translates to: RADGWLWPCGGARRASSSLTLPR*APGLQF
Trigger: GAACTGCAGGCCAGGGGCCAAGCGCGGCAAAGTCAG...GGAACTGCTGGCTCGCCTGGCACCACCACACGGCCACAGCCAGCCATCTGCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443147.5
CDS GCA 90 bp CCCGGCCCTCTCACCAGGTCAGAGGTGCCTCCCCACAGCCTCACATaGAGAGGGGATCGAGGCCTGGGAATCAAGCAGGTGCTGGAGGTG +
Preference number: 5 (lower is better)
Translates to: PGPLTRSEVPPHSLT*RGDRGLGIKQVLEV
Trigger: CACCTCCAGCACCTGCTTGATTCCCAGGCCTCGATCCCCTCTGCATGTGAGGCTGTGGGGAGGCACCTCTGACCTGGTGAGAGGGCCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480424.6
CDS CCA 90 bp CCCAGTGAGTACAGCGGCAGGGAGTTGATGAGGTCCACGAGCAGATaGATCAGGCCCTGCACGGCGACCACCAGGAGCCGGAGCTGTGGC +
Preference number: 5 (lower is better)
Translates to: PSEYSGRELMRSTSR*IRPCTATTRSRSCG
Trigger: GCCACAGCTCCGGCTCCTGGTGGTCGCCGTGCAGGGCCTGATCCATCTGCTCGTGGACCTCATCAACTCCCTGCCGCTGTACTCACTGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480424.6
CDS CCA 90 bp CTACCGCGTCCTAGCGTGGACAGCACACGGGCTCCCCTTCACAGATaGCTCCGGGATTGGGGTCTGAGGAGGCTGGTCTGGAGGCCTCTC +
Preference number: 5 (lower is better)
Translates to: LPRPSVDSTRAPLHR*LRDWGLRRLVWRPL
Trigger: GAGAGGCCTCCAGACCAGCCTCCTCAGACCCCAATCCCGGAGCCATCTGTGAAGGGGAGCCCGTGTGCTGTCCACGCTAGGACGCGGTAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537901.1
ENST00000544860.1
CDS CCA 90 bp ACCTTGGCCAGCCTTCCCTCCTCCAGGGTCTACCGCGTCCTAGCGTaGACAGCACACGGGCTCCCCTTCACAGATGGCTCCGGGATTGGG +
Preference number: 5 (lower is better)
Translates to: TLASLPSSRVYRVLA*TAHGLPFTDGSGIG
Trigger: CCCAATCCCGGAGCCATCTGTGAAGGGGAGCCCGTGTGCTGTCCACGCTAGGACGCGGTAGACCCTGGAGGAGGGAAGGCTGGCCAAGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537901.1
CDS CCA 90 bp TGCTTGGCCAGCCTTCCCTCCTCCAGGGTCTACCGCGTCCTAGCGTaGACAGCACACGGGCTCCCCTTCACAGATGGCTCCGGGATTGGG +
Preference number: 5 (lower is better)
Translates to: CLASLPSSRVYRVLA*TAHGLPFTDGSGIG
Trigger: CCCAATCCCGGAGCCATCTGTGAAGGGGAGCCCGTGTGCTGTCCACGCTAGGACGCGGTAGACCCTGGAGGAGGGAAGGCTGGCCAAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544860.1
CDS-3UTR CAA 90 bp CTGCAGAGGAGGGGGCTGCACCCGGCTGGAAACGGGGCACAGACCATGCAGGGATGGGCCAGGAGCTGCTaGACCTGGATGGGGATGAAG +
Preference number: 5 (lower is better)
Translates to: LQRRGLHPAGNGAQTMQGWARSC*TWMGMK
Trigger: CTTCATCCCCATCCAGGTCAAGCAGCTCCTGGCCCA...TCCCTGCATGGTCTGTGCCCCGTTTCCAGCCGGGTGCAGCCCCCTCCTCTGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR CAA 90 bp CACCCGGGACACCGGGCTCCACCCCAGTCCACTCACGTCAGCCACAGGAACGAGTGGGCCAGGAGCTGCTaGACCTGGATGGGGATGAAG +
Preference number: 5 (lower is better)
Translates to: HPGHRAPPQSTHVSHRNEWARSC*TWMGMK
Trigger: CTTCATCCCCATCCAGGTCAAGCAGCTCCTGGCCCA...CTCGTTCCTGTGGCTGACGTGAGTGGACTGGGGTGGAGCCCGGTGTCCCGGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470411.2
CDS-3UTR CAA 90 bp GCAGCAGGTGGGAAGCGGGTCCCAAGGCAGGCAGTGCCAGTGATGGAGTGCGGCTGGGCCAGGAGCTGCTaGACCTGGATGGGGATGAAG +
Preference number: 5 (lower is better)
Translates to: AAGGKRVPRQAVPVMECGWARSC*TWMGMK
Trigger: CTTCATCCCCATCCAGGTCAAGCAGCTCCTGGCCCA...GCCGCACTCCATCACTGGCACTGCCTGCCTTGGGACCCGCTTCCCACCTGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321878.10
ENST00000636657.1
CDS-3UTR CAA 90 bp TGGCTGTGGCCGTGTGGTGGTGCCAGGCGAGCCAGCAGTTCCCTCAGTCCTGCTGACAGGGGCCAGAGCTaGAACACTCGGCAGGCACTG +
Preference number: 5 (lower is better)
Translates to: WLWPCGGARRASSSLSPADRGQS*NTRQAL
Trigger: CAGTGCCTGCCGAGTGTTCAAGCTCTGGCCCCTGTC...AGCAGGACTGAGGGAACTGCTGGCTCGCCTGGCACCACCACACGGCCACAGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443147.5
ENST00000636005.1
ENST00000636657.1
CDS-3UTR CAA 90 bp CTGCAGAGGAGGGGGCTGCACCCGGCTGGAAACGGGGCACAGACCATGCAGGGATCGCACGTGGAGAGTTaGCTCCCGAGGAAGGACAGG +
Preference number: 5 (lower is better)
Translates to: LQRRGLHPAGNGAQTMQGSHVES*LPRKDR
Trigger: CCTGTCCTTCCTCGGGAGCAAACTCTCCACGTGCGA...TCCCTGCATGGTCTGTGCCCCGTTTCCAGCCGGGTGCAGCCCCCTCCTCTGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR CAA 90 bp ACGGAACTTCACGCCAGCCGCCAGCCTGTAGGGCCGGCAGAGCCGAAGACCCAGTCGCACGTGGAGAGTTaGCTCCCGAGGAAGGACAGG +
Preference number: 5 (lower is better)
Translates to: TELHASRQPVGPAEPKTQSHVES*LPRKDR
Trigger: CCTGTCCTTCCTCGGGAGCAAACTCTCCACGTGCGA...CTGGGTCTTCGGCTCTGCCGGCCCTACAGGCTGGCGGCTGGCGTGAAGTTCCGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
ENST00000637468.1
CDS-3UTR CAA 90 bp GAAGCGGACTCGGGCTCACAGGGAACACCCGCACCCAGACCGTGCCGTCTGGCAACAGAGGCCACCGTGTaGGCCTTCCTCATCAGCTGG +
Preference number: 5 (lower is better)
Translates to: EADSGSQGTPAPRPCRLATEATV*AFLISW
Trigger: CCAGCTGATGAGGAAGGCCAACACGGTGGCCTCTGT...TGCCAGACGGCACGGTCTGGGTGCGGGTGTTCCCTGTGAGCCCGAGTCCGCTTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CAA 90 bp GAGCAGATGGCTGGCTGTGGCCGTGTGGTGGTGCCAGGCGAGCCAGCAGTTCCCACAGAGGCCACCGTGTaGGCCTTCCTCATCAGCTGG +
Preference number: 5 (lower is better)
Translates to: EQMAGCGRVVVPGEPAVPTEATV*AFLISW
Trigger: CCAGCTGATGAGGAAGGCCAACACGGTGGCCTCTGT...GGGAACTGCTGGCTCGCCTGGCACCACCACACGGCCACAGCCAGCCATCTGCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321878.10
ENST00000443147.5
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR CAA 90 bp TGGGGAGGCGGTAGGTGTGCACCACGCGGCTGTAGGGCAGTGGGTTTATCTGCATCCCCAAGGAACAGCTaGCGGCACAGGGCGCCCCAG +
Preference number: 5 (lower is better)
Translates to: WGGGRCAPRGCRAVGLSASPRNS*RHRAPQ
Trigger: CTGGGGCGCCCTGTGCCGCAAGCTGTTCCTTGGGGA...TGCAGATAAACCCACTGCCCTACAGCCGCGTGGTGCACACCTACCGCCTCCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000443147.5
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR CAA 90 bp AACACCCGCACCCAGACCGTGCCGTCTGGCAGGCACTTTCGGCCTCAGTGCCACTCTGGACACCTGGGGTaGCTGTGCTCGCCACCATGG +
Preference number: 5 (lower is better)
Translates to: NTRTQTVPSGRHFRPQCHSGHLG*LCSPPW
Trigger: CCATGGTGGCGAGCACAGCAACCCCAGGTGTCCAGA...GTGGCACTGAGGCCGAAAGTGCCTGCCAGACGGCACGGTCTGGGTGCGGGTGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CAA 90 bp GGCAGTGCTCTGGACACCTGGGGTTGCTGTGCTCGCCACCATGGTGACCGCAGCTCTGGACACCTGGGGTaGCTGTGCTCGCCACCATGG +
Preference number: 5 (lower is better)
Translates to: GSALDTWGCCARHHGDRSSGHLG*LCSPPW
Trigger: CCATGGTGGCGAGCACAGCAACCCCAGGTGTCCAGA...GCTGCGGTCACCATGGTGGCGAGCACAGCAACCCCAGGTGTCCAGAGCACTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321878.10
ENST00000635205.1
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CAA 90 bp ACGGGGGTCAGCGACTGCTTCAATCCCCCAGATGCAGGGTGCTGTTCGGCTGAGTCAGTGGGCGGGCCCTaGACACTGAGGCTGCTCCCG +
Preference number: 5 (lower is better)
Translates to: TGVSDCFNPPDAGCCSAESVGGP*TLRLLP
Trigger: CGGGAGCAGCCTCAGTGTCAAGGGCCCGCCCACTGA...CTCAGCCGAACAGCACCCTGCATCTGGGGGATTGAAGCAGTCGCTGACCCCCGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CAA 90 bp GTCCAGCAGCACAGAGGCCACCGTGTTGGCCTTCCTGGAAGGGAGGTCCGGCCCAAGGTAGAACTGGCTTaGTGGGGCGGTGGCTCTGGC +
Preference number: 5 (lower is better)
Translates to: VQQHRGHRVGLPGREVRPKVELA*WGGGSG
Trigger: GCCAGAGCCACCGCCCCACAAAGCCAGTTCTACCTT...GGGCCGGACCTCCCTTCCAGGAAGGCCAACACGGTGGCCTCTGTGCTGCTGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470411.2
CDS-3UTR CAA 90 bp GCTGGGGAGGCGGTAGGTGTGCACCACGCGGCTGTAGGGCAGTGGGTTTATCTGGACAGGGGCCAGAGCTaGAACACTCAGGGGCACCGG +
Preference number: 5 (lower is better)
Translates to: AGEAVGVHHAAVGQWVYLDRGQS*NTQGHR
Trigger: CCGGTGCCCCTGAGTGTTCAAGCTCTGGCCCCTGTC...CAGATAAACCCACTGCCCTACAGCCGCGTGGTGCACACCTACCGCCTCCCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000635909.1
CDS GCA 90 bp ACTGCCAGTGGCTCAGCCGCACGGGGCCCTCATCAAAGCGGTCACTaGGGAAGAGCACCTCACTGCGTGCTACCGTGTCGAAGACGGCAG +
Preference number: 5 (lower is better)
Translates to: TASGSAARGPHQSGH*GRAPHCVLPCRRRQ
Trigger: CTGCCGTCTTCGACACGGTAGCACGCAGTGAGGTGCTCTTCCGCAGTGACCGCTTTGATGAGGGCCCCGTGCGGCTGAGCCACTGGCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000409527.6
ENST00000422307.6
ENST00000443147.5
ENST00000470411.2
ENST00000636657.1
CDS CCA 90 bp TCTACCATCTTCCTCCCCTCTCACTACCTCGGCCACAGGACCCACTaGAGCCCTCGGCCCCAAACACGTGGACGCACTGAGGCCTGGCAG +
Preference number: 5 (lower is better)
Translates to: STIFLPSHYLGHRTH*SPRPQTRGRTEAWQ
Trigger: CTGCCAGGCCTCAGTGCGTCCACGTGTTTGGGGCCGAGGGCTCCAGTGGGTCCTGTGGCCGAGGTAGTGAGAGGGGAGGAAGATGGTAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544860.1
CDS-3UTR CAA 90 bp GCCCAAGGTGTGATAGCAGGGCCTGCCGTGTTCAGGAGCACACAGCAGCGTCCAGTGGGGAAGAAGGCCTaGAGCACCATGCCGGGAGGC +
Preference number: 5 (lower is better)
Translates to: AQGVIAGPAVFRSTQQRPVGKKA*STMPGG
Trigger: GCCTCCCGGCATGGTGCTCAAGGCCTTCTTCCCCAC...TGGACGCTGCTGTGTGCTCCTGAACACGGCAGGCCCTGCTATCACACCTTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321878.10
ENST00000636657.1
CDS-3UTR CAA 90 bp GCCGTGTGGTGGTGCCAGGCGAGCCAGCAGTTCCCTCAGTCCTGCTTGTCCCCTTGGGCCAGGAGCTGCTaGACCTGGATGGGGATGAAG +
Preference number: 5 (lower is better)
Translates to: AVWWCQASQQFPQSCLSPWARSC*TWMGMK
Trigger: CTTCATCCCCATCCAGGTCAAGCAGCTCCTGGCCCA...AGGGGACAAGCAGGACTGAGGGAACTGCTGGCTCGCCTGGCACCACCACACGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443147.5
ENST00000636657.1
CDS-3UTR CAA 90 bp TCCACAGAGGCCCGAGGGTGGGCCAAAGAGTCAGGTACCACCCCCAGCAGGAAGGACAGGGGCCAGAGCTaGAACACTCGGCAGGCACTG +
Preference number: 5 (lower is better)
Translates to: STEARGWAKESGTTPSRKDRGQS*NTRQAL
Trigger: CAGTGCCTGCCGAGTGTTCAAGCTCTGGCCCCTGTC...CTTCCTGCTGGGGGTGGTACCTGACTCTTTGGCCCACCCTCGGGCCTCTGTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR CAA 90 bp GGGGCACCGTGGACGAATAGGTACGGCTGGGTCAGTGGGCGGGCCCTTGACACTTCGCACGTGGAGAGTTaGCTCCCGAGGAAGGACAGG +
Preference number: 5 (lower is better)
Translates to: GAPWTNRYGWVSGRALDTSHVES*LPRKDR
Trigger: CCTGTCCTTCCTCGGGAGCAAACTCTCCACGTGCGA...AGTGTCAAGGGCCCGCCCACTGACCCAGCCGTACCTATTCGTCCACGGTGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CAA 90 bp GGCAGTGCTCTGGACACCTGGGGTTGCTGTGCTCGCCACCATGGTGACCGCAGCTCGCACGTGGAGAGTTaGCTCCCGAGGAAGGACAGG +
Preference number: 5 (lower is better)
Translates to: GSALDTWGCCARHHGDRSSHVES*LPRKDR
Trigger: CCTGTCCTTCCTCGGGAGCAAACTCTCCACGTGCGA...GCTGCGGTCACCATGGTGGCGAGCACAGCAACCCCAGGTGTCCAGAGCACTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CAA 90 bp CCTCCACAGAGGCCCGAGGGTGGGCCAAAGAGTCAGGTACCACCCCCAGCAGGATCGCACGTGGAGAGTTaGCTCCCGAGGAAGGACAGG +
Preference number: 5 (lower is better)
Translates to: PPQRPEGGPKSQVPPPAGSHVES*LPRKDR
Trigger: CCTGTCCTTCCTCGGGAGCAAACTCTCCACGTGCGA...TCCTGCTGGGGGTGGTACCTGACTCTTTGGCCCACCCTCGGGCCTCTGTGGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR CAA 90 bp GCTGTAGGGCAGTGGGTTTATCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCTCGCACGTGGAGAGTTaGCTCCCGAGGAAGGACAGG +
Preference number: 5 (lower is better)
Translates to: AVGQWVYLHQEAEGPAGLSHVES*LPRKDR
Trigger: CCTGTCCTTCCTCGGGAGCAAACTCTCCACGTGCGA...GAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGATAAACCCACTGCCCTACAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000443147.5
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR CAA 90 bp GGGGCACCGTGGACGAATAGGTACGGCTGGGTCAGTGGGCGGGCCCTTGACACTACAGAGGCCACCGTGTaGGCCTTCCTCATCAGCTGG +
Preference number: 5 (lower is better)
Translates to: GAPWTNRYGWVSGRALDTTEATV*AFLISW
Trigger: CCAGCTGATGAGGAAGGCCAACACGGTGGCCTCTGT...AGTGTCAAGGGCCCGCCCACTGACCCAGCCGTACCTATTCGTCCACGGTGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CAA 90 bp CCTGGCCACAAGCAGGCCCAGTGCACACCTGCAGCCCACACAAGACCCACCCAGACAGAGGCCACCGTGTaGGCCTTCCTCATCAGCTGG +
Preference number: 5 (lower is better)
Translates to: PGHKQAQCTPAAHTRPTQTEATV*AFLISW
Trigger: CCAGCTGATGAGGAAGGCCAACACGGTGGCCTCTGT...CTGGGTGGGTCTTGTGTGGGCTGCAGGTGTGCACTGGGCCTGCTTGTGGCCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422307.6
CDS-3UTR CAA 90 bp GTCCTGGTGCTGCTGAGATGGGCGCTGCCTCCTCCCACCCACAGCGCGTCATCCTACAGCGGCAGGGAGTaGATGAGGTCCACGAGCAGA +
Preference number: 5 (lower is better)
Translates to: VLVLLRWALPPPTHSASSYSGRE*MRSTSR
Trigger: TCTGCTCGTGGACCTCATCAACTCCCTGCCGCTGTA...GGATGACGCGCTGTGGGTGGGAGGAGGCAGCGCCCATCTCAGCAGCACCAGGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CAA 90 bp GCAGCAGGTGGGAAGCGGGTCCCAAGGCAGGCAGTGCCAGTGATGGAGTGCGGCTACAGCGGCAGGGAGTaGATGAGGTCCACGAGCAGA +
Preference number: 5 (lower is better)
Translates to: AAGGKRVPRQAVPVMECGYSGRE*MRSTSR
Trigger: TCTGCTCGTGGACCTCATCAACTCCCTGCCGCTGTA...GCCGCACTCCATCACTGGCACTGCCTGCCTTGGGACCCGCTTCCCACCTGCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321878.10
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR CAA 90 bp CCCCGGAACAGACGCCACAGTGAGGACAGGCCATGGATCTTCAGGCAGTACAGCTCCCCAAGGAACAGCTaGCGGCACAGGGCGCCCCAG +
Preference number: 5 (lower is better)
Translates to: PRNRRHSEDRPWIFRQYSSPRNS*RHRAPQ
Trigger: CTGGGGCGCCCTGTGCCGCAAGCTGTTCCTTGGGGA...GCTGTACTGCCTGAAGATCCATGGCCTGTCCTCACTGTGGCGTCTGTTCCGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CAA 90 bp GTGGTGCCAGGCGAGCCAGCAGTTCCCTCAGTCCTGCTTGTCCCCTCTCTGCCTTCTGGACACCTGGGGTaGCTGTGCTCGCCACCATGG +
Preference number: 5 (lower is better)
Translates to: VVPGEPAVPSVLLVPSLPSGHLG*LCSPPW
Trigger: CCATGGTGGCGAGCACAGCAACCCCAGGTGTCCAGA...AGGCAGAGAGGGGACAAGCAGGACTGAGGGAACTGCTGGCTCGCCTGGCACCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR CAA 90 bp TGTGGTGGTGCCAGGCGAGCCAGCAGTTCCCTCAGTCCTGCTTGTCCCCTCTCTCTAGTGCCTCTGACTTaGCCGCGCTTGGCCCCTGGC +
Preference number: 5 (lower is better)
Translates to: CGGARRASSSLSPACPLSLVPLT*PRLAPG
Trigger: GCCAGGGGCCAAGCGCGGCAAAGTCAGAGGCACTAG...AGAGAGGGGACAAGCAGGACTGAGGGAACTGCTGGCTCGCCTGGCACCACCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443147.5
CDS-3UTR CAA 90 bp TCCACAGAGGCCCGAGGGTGGGCCAAAGAGTCAGGTACCACCCCCAGCAGGAAGACAGAGGCCACCGTGTaGGCCTTCCTGGAAGGGAGG +
Preference number: 5 (lower is better)
Translates to: STEARGWAKESGTTPSRKTEATV*AFLEGR
Trigger: CCTCCCTTCCAGGAAGGCCAACACGGTGGCCTCTGT...CTTCCTGCTGGGGGTGGTACCTGACTCTTTGGCCCACCCTCGGGCCTCTGTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470411.2
CDS GCA 90 bp AGCGGCAGGGAGTTGATGAGGTCCACGAGCAGATGGATCAGGCCCTaGACGGCGACCACCAGGAGCCGGAGCTGTGGCAGAGGAGCATTT +
Preference number: 5 (lower is better)
Translates to: SGRELMRSTSRWIRP*TATTRSRSCGRGAF
Trigger: AAATGCTCCTCTGCCACAGCTCCGGCTCCTGGTGGTCGCCGTGCAGGGCCTGATCCATCTGCTCGTGGACCTCATCAACTCCCTGCCGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480424.6
CDS GCA 90 bp AGTGGGTTTATCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTaGCGGAGGACACGGAACTTCACGCCAGCTGCAAGGATAGCAAGC +
Preference number: 5 (lower is better)
Translates to: SGFICIRRRRGLPAS*RRTRNFTPAARIAS
Trigger: GCTTGCTATCCTTGCAGCTGGCGTGAAGTTCCGTGTCCTCCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGATAAACCCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476438.1
CDS CCA 90 bp GCACCCAGCCCTGCAGAGACCAGGGCAGGCCCACACCTCATCAGCTaGGCAGGGTTCTCCGCCTTCCGTGTACTGAAGATTAGCGTGAGG +
Preference number: 5 (lower is better)
Translates to: APSPAETRAGPHLIS*AGFSAFRVLKISVR
Trigger: CCTCACGCTAATCTTCAGTACACGGAAGGCGGAGAACCCTGCCCAGCTGATGAGGTGTGGGCCTGCCCTGGTCTCTGCAGGGCTGGGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470411.2
CDS-3UTR CAA 90 bp TGTGGCCGTGTGGTGGTGCCAGGCGAGCCAGCAGTTCCCTCAGTCCTGCTTGTCTCGCACGTGGAGAGTTaGCTCCCGAGGAAGGACAGG +
Preference number: 5 (lower is better)
Translates to: CGRVVVPGEPAVPSVLLVSHVES*LPRKDR
Trigger: CCTGTCCTTCCTCGGGAGCAAACTCTCCACGTGCGA...GACAAGCAGGACTGAGGGAACTGCTGGCTCGCCTGGCACCACCACACGGCCACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000443147.5
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR CAA 90 bp TGGCCGTGTGGTGGTGCCAGGCGAGCCAGCAGTTCCCTCAGTCCTGCTTGTCCCTACAGCGGCAGGGAGTaGATGAGGTCCACGAGCAGA +
Preference number: 5 (lower is better)
Translates to: WPCGGARRASSSLSPACPYSGRE*MRSTSR
Trigger: TCTGCTCGTGGACCTCATCAACTCCCTGCCGCTGTA...GGGACAAGCAGGACTGAGGGAACTGCTGGCTCGCCTGGCACCACCACACGGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000443147.5
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR CAA 90 bp ACACAGCAGCGTCCACAAAGCACAGGACATGCGCCAGCTGAGCTGGTGCCACCCTCTGGACACCTGGGGTaGCTGTGCTCGCCACCATGG +
Preference number: 5 (lower is better)
Translates to: TQQRPQSTGHAPAELVPPSGHLG*LCSPPW
Trigger: CCATGGTGGCGAGCACAGCAACCCCAGGTGTCCAGA...GGGTGGCACCAGCTCAGCTGGCGCATGTCCTGTGCTTTGTGGACGCTGCTGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321878.10
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR CAA 90 bp CCAAGCCCAAGGTGTGATAGCAGGGCCTGCCGTGTTCAGGAGCACACAGCAGCGTCTGGACACCTGGGGTaGCTGTGCTCGCCACCATGG +
Preference number: 5 (lower is better)
Translates to: PSPRCDSRACRVQEHTAASGHLG*LCSPPW
Trigger: CCATGGTGGCGAGCACAGCAACCCCAGGTGTCCAGA...CGCTGCTGTGTGCTCCTGAACACGGCAGGCCCTGCTATCACACCTTGGGCTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321878.10
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR CAA 90 bp CCCCGGAACAGACGCCACAGTGAGGACAGGCCATGGATCTTCAGGCAGTACAGCACAGAGGCCACCGTGTaGGCCTTCCCAGCCCTGCAG +
Preference number: 5 (lower is better)
Translates to: PRNRRHSEDRPWIFRQYSTEATV*AFPALQ
Trigger: CTGCAGGGCTGGGAAGGCCAACACGGTGGCCTCTGT...GCTGTACTGCCTGAAGATCCATGGCCTGTCCTCACTGTGGCGTCTGTTCCGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638143.1
CDS GCA 90 bp CGAATCACCGTCTCAGCTTCTCTGCAGCTGGGTCACGCTTGGGGCTaGAAGAGAGAGAATAAGGCCCCACTGGGCCCTGTCTCGCTGGGC +
Preference number: 5 (lower is better)
Translates to: RITVSASLQLGHAWG*KRENKAPLGPVSLG
Trigger: GCCCAGCGAGACAGGGCCCAGTGGGGCCTTATTCTCTCTCTTGCAGCCCCAAGCGTGACCCAGCTGCAGAGAAGCTGAGACGGTGATTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409527.6
CDS CCA 90 bp CAGAGGTGCCTCCCCACAGCCTCACATGCAGAGGGGATCGAGGCCTaGGAATCAAGCAGGTGCTGGAGGTGGTTCTGCTCACCTCCCACT +
Preference number: 5 (lower is better)
Translates to: QRCLPTASHAEGIEA*ESSRCWRWFCSPPT
Trigger: AGTGGGAGGTGAGCAGAACCACCTCCAGCACCTGCTTGATTCCCAGGCCTCGATCCCCTCTGCATGTGAGGCTGTGGGGAGGCACCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480424.6
CDS-3UTR CAA 90 bp CCAGAGAGCCAGGAGGGCAACGCTGATCTCAGGGACCACAAGGGAGATACCAGGGACAGGGGCCAGAGCTaGAACACTCGGCAGGCACTG +
Preference number: 5 (lower is better)
Translates to: PESQEGNADLRDHKGDTRDRGQS*NTRQAL
Trigger: CAGTGCCTGCCGAGTGTTCAAGCTCTGGCCCCTGTC...CCTGGTATCTCCCTTGTGGTCCCTGAGATCAGCGTTGCCCTCCTGGCTCTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR CAA 90 bp TGGGGAGGCGGTAGGTGTGCACCACGCGGCTGTAGGGCAGTGGGTTTATCTGCAACAGAGGCCACCGTGTaGGCCTTCCTCATCAGCTGG +
Preference number: 5 (lower is better)
Translates to: WGGGRCAPRGCRAVGLSATEATV*AFLISW
Trigger: CCAGCTGATGAGGAAGGCCAACACGGTGGCCTCTGT...TGCAGATAAACCCACTGCCCTACAGCCGCGTGGTGCACACCTACCGCCTCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000443147.5
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR CAA 90 bp CACACCCCACCCCAGGACTCACTCAGTCGGTTCTGTTCCACCCAGAACTTGAGCAGTGCACGGTTCATCTaGAGCCCGGCGGGAGCACCC +
Preference number: 5 (lower is better)
Translates to: HTPPQDSLSRFCSTQNLSSARFI*SPAGAP
Trigger: GGGTGCTCCCGCCGGGCTCAAGATGAACCGTGCACT...GCTCAAGTTCTGGGTGGAACAGAACCGACTGAGTGAGTCCTGGGGTGGGGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420990.6
CDS-3UTR CAA 90 bp ACGTTCCACTTCTTCCCCCGGAACAGACGCCACAGTGAGGACAGGCCATGGATCAGTGCACGGTTCATCTaGAGCCCGGCGGGAGCACCC +
Preference number: 5 (lower is better)
Translates to: TFHFFPRNRRHSEDRPWISARFI*SPAGAP
Trigger: GGGTGCTCCCGCCGGGCTCAAGATGAACCGTGCACT...GATCCATGGCCTGTCCTCACTGTGGCGTCTGTTCCGGGGGAAGAAGTGGAACGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000635909.1
ENST00000636657.1
ENST00000638143.1
CDS-3UTR CAA 90 bp AATGACCTCCAAGCCCAAGGTGTGATAGCAGGGCCTGCCGTGTTCAGGAGCACATCCCCAAGGAACAGCTaGCGGCACAGGGCGCCCCAG +
Preference number: 5 (lower is better)
Translates to: NDLQAQGVIAGPAVFRSTSPRNS*RHRAPQ
Trigger: CTGGGGCGCCCTGTGCCGCAAGCTGTTCCTTGGGGA...TGTGCTCCTGAACACGGCAGGCCCTGCTATCACACCTTGGGCTTGGAGGTCATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000321878.10
ENST00000540241.1
ENST00000635205.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR CAA 90 bp CACAGGGAACACCCGCACCCAGACCGTGCCGTCTGGCAGGCACTTTCGGCCTCAACGGGGCAGGTTTTATaGTCACAGCAGCTGACGGCT +
Preference number: 5 (lower is better)
Translates to: HREHPHPDRAVWQALSASTGQVL*SQQLTA
Trigger: AGCCGTCAGCTGCTGTGACAATAAAACCTGCCCCGT...TGAGGCCGAAAGTGCCTGCCAGACGGCACGGTCTGGGTGCGGGTGTTCCCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000026218.9
ENST00000321878.10
CDS-3UTR CAA 90 bp AGTCCTGGTGCTGCTGAGATGGGCGCTGCCTCCTCCCACCCACAGCGCGTCATCACGGGGCAGGTTTTATaGTCACAGCAGCTGACGGCT +
Preference number: 5 (lower is better)
Translates to: SPGAAEMGAASSHPQRVITGQVL*SQQLTA
Trigger: AGCCGTCAGCTGCTGTGACAATAAAACCTGCCCCGT...GATGACGCGCTGTGGGTGGGAGGAGGCAGCGCCCATCTCAGCAGCACCAGGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000026218.9
ENST00000321878.10
CDS TCA 90 bp GGGTTTATCCGCCAGCCTGTAGGGCCGGCAGAGCCGAAGACCCAGTaGGTACAGCGGCAGGGAGTTGATGAGGTCCACGAGCAGATGGAT +
Preference number: 5 (lower is better)
Translates to: GFIRQPVGPAEPKTQ*VQRQGVDEVHEQMD
Trigger: ATCCATCTGCTCGTGGACCTCATCAACTCCCTGCCGCTGTACTCACTGGGTCTTCGGCTCTGCCGGCCCTACAGGCTGGCGGATAAACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000026218.9
CDS-3UTR CAA 90 bp GCACTTTTGCAAAAGGGAGGTCTAGGACAAAGTAGGCCGGTGGCAGGTGCGGACGTGGGGAAGAAGGCCTaGAGCACCATGCCGGGAGGC +
Preference number: 5 (lower is better)
Translates to: ALLQKGGLGQSRPVAGADVGKKA*STMPGG
Trigger: GCCTCCCGGCATGGTGCTCAAGGCCTTCTTCCCCAC...GTCCGCACCTGCCACCGGCCTACTTTGTCCTAGACCTCCCTTTTGCAAAAGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS-3UTR CAA 90 bp GGATGTGGTAGAGGAAGAAGCGGCCCAGCACCTGGTCCAGTGCACGGTTCATCTGACAGGGGCCAGAGCTaGAACACTCGGCAGGCACTG +
Preference number: 5 (lower is better)
Translates to: GCGRGRSGPAPGPVHGSSDRGQS*NTRQAL
Trigger: CAGTGCCTGCCGAGTGTTCAAGCTCTGGCCCCTGTC...AGATGAACCGTGCACTGGACCAGGTGCTGGGCCGCTTCTTCCTCTACCACATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636657.1
CDS-3UTR CAA 90 bp AACAGGAGTCCACGCGCTGGCGCAGAACGTTCCACTTCTTCCCCCGGAACAGACTCGCACGTGGAGAGTTaGCTCCCGAGGAAGGACAGG +
Preference number: 5 (lower is better)
Translates to: NRSPRAGAERSTSSPGTDSHVES*LPRKDR
Trigger: CCTGTCCTTCCTCGGGAGCAAACTCTCCACGTGCGA...GTCTGTTCCGGGGGAAGAAGTGGAACGTTCTGCGCCAGCGCGTGGACTCCTGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CAA 90 bp GAGGAAGAGCAGGATGGTGAAGAGCAGAGTCCCGATGAACAGCTGGTCCAGGTCAGTGCACGGTTCATCTaGAGCCCGGCGGGAGCACCC +
Preference number: 5 (lower is better)
Translates to: EEEQDGEEQSPDEQLVQVSARFI*SPAGAP
Trigger: GGGTGCTCCCGCCGGGCTCAAGATGAACCGTGCACT...GACCTGGACCAGCTGTTCATCGGGACTCTGCTCTTCACCATCCTGCTCTTCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000635909.1
ENST00000636657.1
ENST00000638143.1
CDS-3UTR CAA 90 bp GGGGAGGCGGTAGGTGTGCACCACGCGGCTGTAGGGCAGTGGGTTTATCTGCATTACAGCGGCAGGGAGTaGATGAGGTCCACGAGCAGA +
Preference number: 5 (lower is better)
Translates to: GEAVGVHHAAVGQWVYLHYSGRE*MRSTSR
Trigger: TCTGCTCGTGGACCTCATCAACTCCCTGCCGCTGTA...ATGCAGATAAACCCACTGCCCTACAGCCGCGTGGTGCACACCTACCGCCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000443147.5
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR CAA 90 bp ACACAGCAGCGTCCACAAAGCACAGGACATGCGCCAGCTGAGCTGGTGCCACCCTACAGCGGCAGGGAGTaGATGAGGTCCACGAGCAGA +
Preference number: 5 (lower is better)
Translates to: TQQRPQSTGHAPAELVPPYSGRE*MRSTSR
Trigger: TCTGCTCGTGGACCTCATCAACTCCCTGCCGCTGTA...GGGTGGCACCAGCTCAGCTGGCGCATGTCCTGTGCTTTGTGGACGCTGCTGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321878.10
ENST00000540241.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS-3UTR CAA 90 bp GAGTTGATGAGGTCCACGAGCAGATGGATCAGGCCCTGCACGGCGACCACCAGGTACAGCGGCAGGGAGTaGATGAGGTCCACGAGCAGA +
Preference number: 5 (lower is better)
Translates to: ELMRSTSRWIRPCTATTRYSGRE*MRSTSR
Trigger: TCTGCTCGTGGACCTCATCAACTCCCTGCCGCTGTA...CCTGGTGGTCGCCGTGCAGGGCCTGATCCATCTGCTCGTGGACCTCATCAACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000635909.1
ENST00000636657.1
ENST00000637468.1
CDS TCA 90 bp CTGGCGCAGAACGTTCCACTTCTTCCCCCGGAACAGACGCCACAGTaGGGACAGGCCATGGATCTTCAGGCAGTACAGCCTGGTCCAGTG +
Preference number: 5 (lower is better)
Translates to: LAQNVPLLPPEQTPQ*GQAMDLQAVQPGPV
Trigger: CACTGGACCAGGCTGTACTGCCTGAAGATCCATGGCCTGTCCTCACTGTGGCGTCTGTTCCGGGGGAAGAAGTGGAACGTTCTGCGCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637468.1
CDS CCA 90 bp TTCCACTTCTTCCCCCGGAACAGACGCCACAGTGAGGACAGGCCATaGATCTTCAGGCAGTACAGCCTACAGGACGCAGTGCTGTCGGGC +
Preference number: 5 (lower is better)
Translates to: FHFFPRNRRHSEDRP*IFRQYSLQDAVLSG
Trigger: GCCCGACAGCACTGCGTCCTGTAGGCTGTACTGCCTGAAGATCCATGGCCTGTCCTCACTGTGGCGTCTGTTCCGGGGGAAGAAGTGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635935.1
CDS-3UTR CAA 90 bp ACAGACGCCACAGTGAGGACAGGCCATGGATCTTCAGGCAGTACAGCTGATCCAAGTGCACGGTTCATCTaGAGCCCGGCGGGAGCACCC +
Preference number: 5 (lower is better)
Translates to: TDATVRTGHGSSGSTADPSARFI*SPAGAP
Trigger: GGGTGCTCCCGCCGGGCTCAAGATGAACCGTGCACT...TGGATCAGCTGTACTGCCTGAAGATCCATGGCCTGTCCTCACTGTGGCGTCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638143.1
CDS-3UTR CAA 90 bp CTCCAGGGAACATCCGCAAATAAACCCCGTGTGGTTCAGGGAGTGAGGGCCCGGTACAGCGGCAGGGAGTaGATGAGGTCCACGAGCAGA +
Preference number: 5 (lower is better)
Translates to: LQGTSANKPRVVQGVRARYSGRE*MRSTSR
Trigger: TCTGCTCGTGGACCTCATCAACTCCCTGCCGCTGTA...CCGGGCCCTCACTCCCTGAACCACACGGGGTTTATTTGCGGATGTTCCCTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321878.10
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CAA 90 bp GAAGGCCCAGAGGCAGCATGGAAATGCACTAGATCTGCAGAGGAGGGGGCTGCAAAGGTAGAACTGGCTTaGTGGGGCGGTGGCTCTGGC +
Preference number: 5 (lower is better)
Translates to: EGPEAAWKCTRSAEEGAAKVELA*WGGGSG
Trigger: GCCAGAGCCACCGCCCCACAAAGCCAGTTCTACCTT...TGCAGCCCCCTCCTCTGCAGATCTAGTGCATTTCCATGCTGCCTCTGGGCCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422307.6
ENST00000470411.2
CDS GCA 90 bp TGGAGGCCAGAGTCCAGTCAGTCCGAATCACCGTCTCAGCTTCTCTaGAGCTGGGTCACGCTTGGGGCTGCAAGAGAGAGAATAAGGCCC +
Preference number: 5 (lower is better)
Translates to: WRPESSQSESPSQLL*SWVTLGAARERIRP
Trigger: GGGCCTTATTCTCTCTCTTGCAGCCCCAAGCGTGACCCAGCTGCAGAGAAGCTGAGACGGTGATTCGGACTGACTGGACTCTGGCCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409527.6
CDS-3UTR CAA 90 bp TTCCACTTCTTCCCCCGGAACAGACGCCACAGTGAGGACAGGCCATGGATCTTCACAGAGGCCACCGTGTaGGCCTTCCTCATCAGCTGG +
Preference number: 5 (lower is better)
Translates to: FHFFPRNRRHSEDRPWIFTEATV*AFLISW
Trigger: CCAGCTGATGAGGAAGGCCAACACGGTGGCCTCTGT...GAAGATCCATGGCCTGTCCTCACTGTGGCGTCTGTTCCGGGGGAAGAAGTGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635909.1
ENST00000636657.1
CDS-3UTR CAA 90 bp AGGTGTGATAGCAGGGCCTGCCGTGTTCAGGAGCACACAGCAGCGTCCACAAAGTACAGCGGCAGGGAGTaGATGAGGTCCACGAGCAGA +
Preference number: 5 (lower is better)
Translates to: RCDSRACRVQEHTAASTKYSGRE*MRSTSR
Trigger: TCTGCTCGTGGACCTCATCAACTCCCTGCCGCTGTA...CTTTGTGGACGCTGCTGTGTGCTCCTGAACACGGCAGGCCCTGCTATCACACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000321878.10
ENST00000540241.1
ENST00000635909.1
ENST00000636005.1
ENST00000636657.1
CDS CCA 72 bp AAGCGGCCCAGGCTCTCCTCGGGCTCCTGCCGGCAGTaGCACCAGGTGCCCAGCACGGCCACGCCCACCTGG +
Preference number: 6 (lower is better)
Translates to: KRPRLSSGSCRQ*HQVPSTATPTW
Trigger: CCAGGTGGGCGTGGCCGTGCTGGGCACCTGGTGCCACTGCCGGCAGGAGCCCGAGGAGAGCCTGGGCCGCTT
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000026218.9
ENST00000293874.2
ENST00000321878.10
ENST00000409527.6
ENST00000422307.6
ENST00000439574.1
ENST00000443147.5
ENST00000470411.2
ENST00000636657.1
CDS CCA 72 bp CAGGGGCACCGGGGGCAGTGGGCGCTTGCCGGTGGGTaGCCTCGCAGCTCCAGAACGTGCCGCCTCTCTCCC +
Preference number: 6 (lower is better)
Translates to: QGHRGQWALAGG*PRSSRTCRLSP
Trigger: GGGAGAGAGGCGGCACGTTCTGGAGCTGCGAGGCCACCCACCGGCAAGCGCCCACTGCCCCCGGTGCCCCTG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000026218.9
ENST00000293874.2
ENST00000321878.10
ENST00000409527.6
ENST00000422307.6
ENST00000443147.5
ENST00000470411.2
ENST00000635909.1
ENST00000636657.1
CDS CCA 72 bp CAGCCAGGGGCACCGGGGGCAGTGGGCGCTTGCCGGTaGGTGGCCTCGCAGCTCCAGAACGTGCCGCCTCTC +
Preference number: 6 (lower is better)
Translates to: QPGAPGAVGACR*VASQLQNVPPL
Trigger: GAGAGGCGGCACGTTCTGGAGCTGCGAGGCCACCCACCGGCAAGCGCCCACTGCCCCCGGTGCCCCTGGCTG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636657.1
CDS CCA 72 bp GGCAGTGGTGGCTCCAGCCAGGGGCACCGGGGGCAGTaGGCGCTTGCCGGTGGGTGGCCTCGCAGCTCCAGA +
Preference number: 6 (lower is better)
Translates to: GSGGSSQGHRGQ*ALAGGWPRSSR
Trigger: TCTGGAGCTGCGAGGCCACCCACCGGCAAGCGCCCACTGCCCCCGGTGCCCCTGGCTGGAGCCACCACTGCC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636657.1
CDS CCA 72 bp AGCAGGCTGCCCCCTTGTGGTGCCCAAGCACCGCGCTaGCCCAGCGGGCACAGGCCGGAGGCAGTCAGCCCC +
Preference number: 6 (lower is better)
Translates to: SRLPPCGAQAPR*PSGHRPEAVSP
Trigger: GGGGCTGACTGCCTCCGGCCTGTGCCCGCTGGGCCAGCGCGGTGCTTGGGCACCACAAGGGGGCAGCCTGCT
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635935.1
CDS GCA 72 bp CTCTCCAGGAAGCGGCCCAGGCTCTCCTCGGGCTCCTaGCGGCAGTGGCACCAGGTGCCCAGCACGGCCACG +
Preference number: 6 (lower is better)
Translates to: LSRKRPRLSSGS*RQWHQVPSTAT
Trigger: CGTGGCCGTGCTGGGCACCTGGTGCCACTGCCGGCAGGAGCCCGAGGAGAGCCTGGGCCGCTTCCTGGAGAG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000026218.9
ENST00000293874.2
ENST00000321878.10
ENST00000409527.6
ENST00000422307.6
ENST00000439574.1
ENST00000443147.5
ENST00000470411.2
ENST00000636657.1
CDS GCA 72 bp TGGTCCTCACCAGGGGCACCGGGGGCAGTGGGCGCTTaGCGGTGGGTGGCCTCGCAGCTCCAGAACGTGCCG +
Preference number: 6 (lower is better)
Translates to: WSSPGAPGAVGA*RWVASQLQNVP
Trigger: CGGCACGTTCTGGAGCTGCGAGGCCACCCACCGGCAAGCGCCCACTGCCCCCGGTGCCCCTGGTGAGGACCA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000026218.9
ENST00000293874.2
ENST00000321878.10
ENST00000409527.6
ENST00000422307.6
ENST00000443147.5
ENST00000470411.2
CDS GCA 72 bp TCAGCTGCAGGACGGGAGCAGGCTGCCCCCTTGTGGTaGCCAAGCACCGCGCTGGCCCAGCGGGCACAGGCC +
Preference number: 6 (lower is better)
Translates to: SAAGREQAAPLW*PSTALAQRAQA
Trigger: GGCCTGTGCCCGCTGGGCCAGCGCGGTGCTTGGGCACCACAAGGGGGCAGCCTGCTCCCGTCCTGCAGCTGA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635935.1
CDS GCA 72 bp CCTGTGCGCGGCCTCAGCTGCAGGACGGGAGCAGGCTaGCCCCTTGTGGTGCCCAAGCACCGCGCTGGCCCA +
Preference number: 6 (lower is better)
Translates to: PVRGLSCRTGAG*PLVVPKHRAGP
Trigger: TGGGCCAGCGCGGTGCTTGGGCACCACAAGGGGGCAGCCTGCTCCCGTCCTGCAGCTGAGGCCGCGCACAGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635935.1
CDS CCA 72 bp TCACCAGGGGCACCGGGGGCAGTGGGCGCTTGCCGGTaGGTGGCCTCGCAGCTCCAGAACGTGCCGCCTCTC +
Preference number: 6 (lower is better)
Translates to: SPGAPGAVGACR*VASQLQNVPPL
Trigger: GAGAGGCGGCACGTTCTGGAGCTGCGAGGCCACCCACCGGCAAGCGCCCACTGCCCCCGGTGCCCCTGGTGA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000026218.9
ENST00000293874.2
ENST00000321878.10
ENST00000409527.6
ENST00000422307.6
ENST00000443147.5
ENST00000470411.2
CDS CCA 72 bp CACTCAGGGGCACCGGGGGCAGTGGGCGCTTGCCGGTaGGTGGCCTCGCAGCTCCAGAACGTGCCGCCTCTC +
Preference number: 6 (lower is better)
Translates to: HSGAPGAVGACR*VASQLQNVPPL
Trigger: GAGAGGCGGCACGTTCTGGAGCTGCGAGGCCACCCACCGGCAAGCGCCCACTGCCCCCGGTGCCCCTGAGTG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635909.1
CDS CAA 90 bp CTGGCAGTGGTGGCTCCAGCCAGGGGCACCGGGGGCAGTGGGCGCTaGCCGGTGGGTGGCCTCGCAGCTCCAGAACGTGCCGCCTCTCTC +
Preference number: 6 (lower is better)
Translates to: LAVVAPARGTGGSGR*PVGGLAAPERAASL
Trigger: GAGAGAGGCGGCACGTTCTGGAGCTGCGAGGCCACCCACCGGCAAGCGCCCACTGCCCCCGGTGCCCCTGGCTGGAGCCACCACTGCCAG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636657.1
CDS GCA 72 bp GGAAAGTGCAGGACCGCCAGGACCACGGCGCTGCTCTaGTCCGGCACCCACCGTCCCACCAGCAGCCCGCTG +
Preference number: 6 (lower is better)
Translates to: GKCRTARTTALL*SGTHRPTSSPL
Trigger: CAGCGGGCTGCTGGTGGGACGGTGGGTGCCGGAGCAGAGCAGCGCCGTGGTCCTGGCGGTCCTGCACTTTCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000026218.9
ENST00000293874.2
ENST00000321878.10
ENST00000409527.6
ENST00000422307.6
ENST00000439574.1
ENST00000443147.5
ENST00000470411.2
ENST00000636657.1
CDS GCA 72 bp CCCCGCCCCCTCCGTCGCCCAACTCCTGGAGCTGGCTaGCAGGCCGGCATCAAAGCCTCCTGCAGCCAGGCA +
Preference number: 6 (lower is better)
Translates to: PRPLRRPTPGAG*QAGIKASCSQA
Trigger: TGCCTGGCTGCAGGAGGCTTTGATGCCGGCCTGGCAGCCAGCTCCAGGAGTTGGGCGACGGAGGGGGCGGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476438.1
CDS CCA 72 bp TGGTCTGGAGGCCTCTCTCTGCAGGCCTGGGTGACATaGCCGGGCCCACAGGGCATCCGCGTGGCCCCCTGC +
Preference number: 6 (lower is better)
Translates to: WSGGLSLQAWVT*PGPQGIRVAPC
Trigger: GCAGGGGGCCACGCGGATGCCCTGTGGGCCCGGCCATGTCACCCAGGCCTGCAGAGAGAGGCCTCCAGACCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000537901.1
ENST00000544860.1
CDS CAA 90 bp GAGCATGACCTGGTCCTCACCAGGGGCACCGGGGGCAGTGGGCGCTaGCCGGTGGGTGGCCTCGCAGCTCCAGAACGTGCCGCCTCTCTC +
Preference number: 6 (lower is better)
Translates to: EHDLVLTRGTGGSGR*PVGGLAAPERAASL
Trigger: GAGAGAGGCGGCACGTTCTGGAGCTGCGAGGCCACCCACCGGCAAGCGCCCACTGCCCCCGGTGCCCCTGGTGAGGACCAGGTCATGCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000026218.9
ENST00000293874.2
ENST00000321878.10
ENST00000409527.6
ENST00000422307.6
ENST00000443147.5
ENST00000470411.2
CDS GCA 72 bp GTGTCCTCAGGCCCTGCATCAGGAGGCGGAGGGGCCTaGCGGCCTCGTGCCGGAGGACACGGAACTTCACGC +
Preference number: 6 (lower is better)
Translates to: VSSGPASGGGGA*RPRAGGHGTSR
Trigger: GCGTGAAGTTCCGTGTCCTCCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGGGCCTGAGGACAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420990.6
CDS GCA 72 bp CTTGAACACTCAGGGGCACCGGGGGCAGTGGGCGCTTaGCGGTGGGTGGCCTCGCAGCTCCAGAACGTGCCG +
Preference number: 6 (lower is better)
Translates to: LEHSGAPGAVGA*RWVASQLQNVP
Trigger: CGGCACGTTCTGGAGCTGCGAGGCCACCCACCGGCAAGCGCCCACTGCCCCCGGTGCCCCTGAGTGTTCAAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635909.1
CDS CCA 72 bp AGAGGAGCATTTAGGACCGGCCCGGCCAGACGCGCCTaGGGGCAGAGCAGTCCGACCCCATCCTGGGCCACG +
Preference number: 6 (lower is better)
Translates to: RGAFRTGPARRA*GQSSPTPSWAT
Trigger: CGTGGCCCAGGATGGGGTCGGACTGCTCTGCCCCCAGGCGCGTCTGGCCGGGCCGGTCCTAAATGCTCCTCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480424.6
CDS CAA 90 bp GGGGAGAGCAGGGACCCCACCCTGAGCAGGGCACGGAGTCTGCCATaGGGCCTTGCTCTGGAGCAAAGCTGGAGGCGGAGCACCCGGCCC +
Preference number: 6 (lower is better)
Translates to: GESRDPTLSRARSLP*GLALEQSWRRSTRP
Trigger: GGGCCGGGTGCTCCGCCTCCAGCTTTGCTCCAGAGCAAGGCCCAATGGCAGACTCCGTGCCCTGCTCAGGGTGGGGTCCCTGCTCTCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480424.6
CDS CAA 90 bp GCCACGCCCACCTGGCTGGCCTGCCGCACCTGGGCCAGGAGCTGCTaGACCTGGATGGGGATGAAGGGAAAGTGCAGGACCGCCAGGACC +
Preference number: 6 (lower is better)
Translates to: ATPTWLACRTWARSC*TWMGMKGKCRTART
Trigger: GGTCCTGGCGGTCCTGCACTTTCCCTTCATCCCCATCCAGGTCAAGCAGCTCCTGGCCCAGGTGCGGCAGGCCAGCCAGGTGGGCGTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000026218.9
ENST00000293874.2
ENST00000321878.10
ENST00000409527.6
ENST00000422307.6
ENST00000439574.1
ENST00000443147.5
ENST00000470411.2
ENST00000636657.1
CDS GCA 72 bp CCCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTaGCGGAGGACACGGAACTTCACGCCAGTGGATGGT +
Preference number: 6 (lower is better)
Translates to: PCIRRRRGLPAS*RRTRNFTPVDG
Trigger: ACCATCCACTGGCGTGAAGTTCCGTGTCCTCCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420990.6
CDS GCA 72 bp GGCCTGCAGCAGGAGACAGCCCGCCCCACAGCTGACTaGTCCCAGGCAGCGCTGGCAGAAGCCACACAGAGC +
Preference number: 6 (lower is better)
Translates to: GLQQETARPTAD*SQAALAEATQS
Trigger: GCTCTGTGTGGCTTCTGCCAGCGCTGCCTGGGAGCAGTCAGCTGTGGGGCGGGCTGTCTCCTGCTGCAGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480424.6
CDS TCA 72 bp ACGTGGCCTGCAGCAGGAGACAGCCCGCCCCACAGCTaGCTGCTCCCAGGCAGCGCTGGCAGAAGCCACACA +
Preference number: 6 (lower is better)
Translates to: TWPAAGDSPPHS*LLPGSAGRSHT
Trigger: TGTGTGGCTTCTGCCAGCGCTGCCTGGGAGCAGTCAGCTGTGGGGCGGGCTGTCTCCTGCTGCAGGCCACGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480424.6
CDS TCA 72 bp CCACTGGAGCCCTCGGCCCCAAACACGTGGACGCACTaGGGCCTGGCAGACCCTGATTCGGCTCCAGCCCTG +
Preference number: 6 (lower is better)
Translates to: PLEPSAPNTWTH*GLADPDSAPAL
Trigger: CAGGGCTGGAGCCGAATCAGGGTCTGCCAGGCCTCAGTGCGTCCACGTGTTTGGGGCCGAGGGCTCCAGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544860.1
CDS GCA 72 bp CACCCTGAGCAGGGCACGGAGTCTGCCATTGGGCCTTaGTCTGGAGCAAAGCTGGAGGCGGAGCACCCGGCC +
Preference number: 6 (lower is better)
Translates to: HPEQGTESAIGP*SGAKLEAEHPA
Trigger: GGCCGGGTGCTCCGCCTCCAGCTTTGCTCCAGAGCAAGGCCCAATGGCAGACTCCGTGCCCTGCTCAGGGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480424.6
CDS GCA 72 bp ATCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTaGCGGAGGACACGGAACTTCACGCCAGCTGCAAGG +
Preference number: 6 (lower is better)
Translates to: ICIRRRRGLPAS*RRTRNFTPAAR
Trigger: CCTTGCAGCTGGCGTGAAGTTCCGTGTCCTCCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476438.1
CDS GCA 72 bp GTGCCCTCCCCCATCCCGGAGCTGCAGTCGGGACCTTaGGGCTTCCTGAGGGAACTCGGGATGGCCTGCTCA +
Preference number: 6 (lower is better)
Translates to: VPSPIPELQSGP*GFLRELGMACS
Trigger: TGAGCAGGCCATCCCGAGTTCCCTCAGGAAGCCGCAAGGTCCCGACTGCAGCTCCGGGATGGGGGAGGGCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635935.1
CDS CCA 72 bp CAGTGGTGGCTCCAGCCTGGCGGTCGGGCAGGACGGTaGGCAGGTGTAGCTGTGACAGCAACACCTGGCGCT +
Preference number: 6 (lower is better)
Translates to: QWWLQPGGRAGR*AGVAVTATPGA
Trigger: AGCGCCAGGTGTTGCTGTCACAGCTACACCTGCCCACCGTCCTGCCCGACCGCCAGGCTGGAGCCACCACTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000409527.6
ENST00000422307.6
ENST00000443147.5
ENST00000470411.2
CDS CAA 72 bp CTGTCCGTCGAGACGCAGCACGTGGGGAAGAAGGCCTaGAGCACCATGCCGGGAGGCTGGCGCGGTGGCTCA +
Preference number: 6 (lower is better)
Translates to: LSVETQHVGKKA*STMPGGWRGGS
Trigger: TGAGCCACCGCGCCAGCCTCCCGGCATGGTGCTCAAGGCCTTCTTCCCCACGTGCTGCGTCTCGACGGACAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439574.1
CDS CAA 72 bp TGTGCCCTCCCCCATCCCGGAGCTGCAGTCGGGACCTaGCGGCTTCCTGAGGGAACTCGGGATGGCCTGCTC +
Preference number: 6 (lower is better)
Translates to: CALPHPGAAVGT*RLPEGTRDGLL
Trigger: GAGCAGGCCATCCCGAGTTCCCTCAGGAAGCCGCAAGGTCCCGACTGCAGCTCCGGGATGGGGGAGGGCACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635935.1
CDS CAA 90 bp GCCCAGCACTGTGCCCTCCCCCATCCCGGAGCTGCAGTCGGGACCTaGCGGCTTCCTGAGGGAACTCGGGATGGCCTGCTCAGAAGCAGT +
Preference number: 6 (lower is better)
Translates to: AQHCALPHPGAAVGT*RLPEGTRDGLLRSS
Trigger: ACTGCTTCTGAGCAGGCCATCCCGAGTTCCCTCAGGAAGCCGCAAGGTCCCGACTGCAGCTCCGGGATGGGGGAGGGCACAGTGCTGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635935.1
CDS GCA 72 bp ATCTGCATCAGGAGGCGGAGGGGCCTGCCGGCCTCGTaGCGGAGGACACGGAACTTCACGCCAGTGGATGGT +
Preference number: 6 (lower is better)
Translates to: ICIRRRRGLPAS*RRTRNFTPVDG
Trigger: ACCATCCACTGGCGTGAAGTTCCGTGTCCTCCGGCACGAGGCCGGCAGGCCCCTCCGCCTCCTGATGCAGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443147.5
CDS GCA 72 bp GATAGGGCCTCGCCCACTCCAGAGCGCAGCACTCACTaGCCAGAGGGTCCTGAAAGGCCACCCACGTGGCCT +
Preference number: 6 (lower is better)
Translates to: DRASPTPERSTH*PEGPERPPTWP
Trigger: AGGCCACGTGGGTGGCCTTTCAGGACCCTCTGGGCAGTGAGTGCTGCGCTCTGGAGTGGGCGAGGCCCTATC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480424.6
CDS GCA 72 bp CTGCCGTGGGGTCCTTCCACCACGCACCCAGCTGCGTaGTCCAGGGCAGTGAGGGTGTCTTACTGGCCAGGA +
Preference number: 6 (lower is better)
Translates to: LPWGPSTTHPAA*SRAVRVSYWPG
Trigger: TCCTGGCCAGTAAGACACCCTCACTGCCCTGGAGCACGCAGCTGGGTGCGTGGTGGAAGGACCCCACGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480424.6
CDS GCA 72 bp GGCCTCGTGCCGGAGGACACGGAACTTCACGCCAGCTaGAAGGATAGCAAGCGGCTGACGAGGGGACGCGTG +
Preference number: 6 (lower is better)
Translates to: GLVPEDTELHAS*KDSKRLTRGRV
Trigger: CACGCGTCCCCTCGTCAGCCGCTTGCTATCCTTGCAGCTGGCGTGAAGTTCCGTGTCCTCCGGCACGAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476438.1
CDS CCA 72 bp AGAGAGAGAATAAGGCCCCACTGGGCCCTGTCTCGCTaGGCCCTGCTTCGGGGCTGGGTGGCTGCAGCCTCT +
Preference number: 6 (lower is better)
Translates to: RERIRPHWALSR*ALLRGWVAAAS
Trigger: AGAGGCTGCAGCCACCCAGCCCCGAAGCAGGGCCCAGCGAGACAGGGCCCAGTGGGGCCTTATTCTCTCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409527.6
CDS TCA 72 bp CCCAAACACGTGGACGCACTGAGGCCTGGCAGACCCTaGTTCGGCTCCAGCCCTGCAGGGAAGCCCACAGCT +
Preference number: 6 (lower is better)
Translates to: PKHVDALRPGRP*FGSSPAGKPTA
Trigger: AGCTGTGGGCTTCCCTGCAGGGCTGGAGCCGAATCAGGGTCTGCCAGGCCTCAGTGCGTCCACGTGTTTGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544860.1
CDS TCA 72 bp CCATCCCGGAGCTGCAGTCGGGACCTTGCGGCTTCCTaGGGGAACTCGGGATGGCCTGCTCAGAAGCAGTCC +
Preference number: 6 (lower is better)
Translates to: PSRSCSRDLAAS*GNSGWPAQKQS
Trigger: GGACTGCTTCTGAGCAGGCCATCCCGAGTTCCCTCAGGAAGCCGCAAGGTCCCGACTGCAGCTCCGGGATGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635935.1
CDS GCA 72 bp GGCTCAGCCGCACGGGGCCCTCATCAAAGCGGTCACTaGGGAAGAGCACCTCACTGCGTGCTACCGTGTCGA +
Preference number: 6 (lower is better)
Translates to: GSAARGPHQSGH*GRAPHCVLPCR
Trigger: TCGACACGGTAGCACGCAGTGAGGTGCTCTTCCGCAGTGACCGCTTTGATGAGGGCCCCGTGCGGCTGAGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000409527.6
ENST00000422307.6
ENST00000443147.5
ENST00000470411.2
ENST00000636657.1
CDS CCA 72 bp ACGGAACTTCACGCCAGTGGATGGTGGCCGCCCTGCTaGCTCCTAGTGCCTCTGACTTTGCCGCGCTTGGCC +
Preference number: 6 (lower is better)
Translates to: TELHASGWWPPC*LLVPLTLPRLA
Trigger: GGCCAAGCGCGGCAAAGTCAGAGGCACTAGGAGCCAGCAGGGCGGCCACCATCCACTGGCGTGAAGTTCCGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420990.6
ENST00000443147.5
CDS CCA 72 bp CGGAGTCTGCCATTGGGCCTTGCTCTGGAGCAAAGCTaGAGGCGGAGCACCCGGCCCTCTCACCAGGTCAGA +
Preference number: 6 (lower is better)
Translates to: RSLPLGLALEQS*RRSTRPSHQVR
Trigger: TCTGACCTGGTGAGAGGGCCGGGTGCTCCGCCTCCAGCTTTGCTCCAGAGCAAGGCCCAATGGCAGACTCCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480424.6
CDS CCA 72 bp CCTAGCGTGGACAGCACACGGGCTCCCCTTCACAGATaGCTCCGGGATTGGGGTCTGAGGAGGCTGGTCTGG +
Preference number: 6 (lower is better)
Translates to: PSVDSTRAPLHR*LRDWGLRRLVW
Trigger: CCAGACCAGCCTCCTCAGACCCCAATCCCGGAGCCATCTGTGAAGGGGAGCCCGTGTGCTGTCCACGCTAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537901.1
ENST00000544860.1
CDS CCA 72 bp AGCCTTCCCTCCTCCAGGGTCTACCGCGTCCTAGCGTaGACAGCACACGGGCTCCCCTTCACAGATGGCTCC +
Preference number: 6 (lower is better)
Translates to: SLPSSRVYRVLA*TAHGLPFTDGS
Trigger: GGAGCCATCTGTGAAGGGGAGCCCGTGTGCTGTCCACGCTAGGACGCGGTAGACCCTGGAGGAGGGAAGGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537901.1
ENST00000544860.1
CDS GCA 72 bp CCTCATCAAAGCGGTCACTGCGGAAGAGCACCTCACTaGGTGCTACCGTGTCGAAGACGGCAGCCAGGCCCC +
Preference number: 6 (lower is better)
Translates to: PHQSGHCGRAPH*VLPCRRRQPGP
Trigger: GGGGCCTGGCTGCCGTCTTCGACACGGTAGCACGCAGTGAGGTGCTCTTCCGCAGTGACCGCTTTGATGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000026218.9
ENST00000321878.10
ENST00000409527.6
ENST00000422307.6
ENST00000443147.5
ENST00000470411.2
ENST00000636657.1
CDS GCA 72 bp GACACGGAACTTCACGCCAGTGGATGGTGGCCGCCCTaGTGGCTCCTAGTGCCTCTGACTTTGCCGCGCTTG +
Preference number: 6 (lower is better)
Translates to: DTELHASGWWPP*WLLVPLTLPRL
Trigger: CAAGCGCGGCAAAGTCAGAGGCACTAGGAGCCAGCAGGGCGGCCACCATCCACTGGCGTGAAGTTCCGTGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420990.6
ENST00000443147.5
CDS GCA 72 bp GAGTTGATGAGGTCCACGAGCAGATGGATCAGGCCCTaGACGGCGACCACCAGGAGCCGGAGCTGTGGCAGA +
Preference number: 6 (lower is better)
Translates to: ELMRSTSRWIRP*TATTRSRSCGR
Trigger: TCTGCCACAGCTCCGGCTCCTGGTGGTCGCCGTGCAGGGCCTGATCCATCTGCTCGTGGACCTCATCAACTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480424.6
CDS GCA 72 bp AGGCCGGAGGCAGTCAGCCCCTCCAGCCACGAACCCTaGCCCATACCTGGTCCAGGTCATAGGAACAGGAGT +
Preference number: 6 (lower is better)
Translates to: RPEAVSPSSHEP*PIPGPGHRNRS
Trigger: ACTCCTGTTCCTATGACCTGGACCAGGTATGGGGCAGGGTTCGTGGCTGGAGGGGCTGACTGCCTCCGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635935.1
CDS GCA 72 bp TCTGTCTCTTCTCTGTGGCCCAGGGAAGCTCTGCGCTaGTTCAGAGCCCCACGTGCAGCCCACACCGCAGAC +
Preference number: 6 (lower is better)
Translates to: SVSSLWPREALR*FRAPRAAHTAD
Trigger: GTCTGCGGTGTGGGCTGCACGTGGGGCTCTGAAGCAGCGCAGAGCTTCCCTGGGCCACAGAGAAGAGACAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635935.1
CDS GCA 72 bp ACCAAGAACATGCTCTGCATGGCAGCATCCAGCGGCTaGGGCAAGTGTGAGCAGCAGACGGGCCCGGGCAAC +
Preference number: 6 (lower is better)
Translates to: TKNMLCMAASSG*GKCEQQTGPGN
Trigger: GTTGCCCGGGCCCGTCTGCTGCTCACACTTGCCGCAGCCGCTGGATGCTGCCATGCAGAGCATGTTCTTGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635935.1
CDS CCA 72 bp GCAGAGGGGATCGAGGCCTGGGAATCAAGCAGGTGCTaGAGGTGGTTCTGCTCACCTCCCACTGTCTGCCCC +
Preference number: 6 (lower is better)
Translates to: AEGIEAWESSRC*RWFCSPPTVCP
Trigger: GGGGCAGACAGTGGGAGGTGAGCAGAACCACCTCCAGCACCTGCTTGATTCCCAGGCCTCGATCCCCTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480424.6
CDS CAA 72 bp TCAGGCAGTACAGCCTGGTCCAGTGCACGGTTCATCTaGAGCCCGGCGGGAGCACCCATCAGCCACTGCAGC +
Preference number: 6 (lower is better)
Translates to: SGSTAWSSARFI*SPAGAPISHCS
Trigger: GCTGCAGTGGCTGATGGGTGCTCCCGCCGGGCTCAAGATGAACCGTGCACTGGACCAGGCTGTACTGCCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637468.1
CDS GCA 72 bp CTCACCAGGTCAGAGGTGCCTCCCCACAGCCTCACATaGAGAGGGGATCGAGGCCTGGGAATCAAGCAGGTG +
Preference number: 6 (lower is better)
Translates to: LTRSEVPPHSLT*RGDRGLGIKQV
Trigger: CACCTGCTTGATTCCCAGGCCTCGATCCCCTCTGCATGTGAGGCTGTGGGGAGGCACCTCTGACCTGGTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480424.6
CDS GCA 72 bp CATGCAGAGGGGATCGAGGCCTGGGAATCAAGCAGGTaGTGGAGGTGGTTCTGCTCACCTCCCACTGTCTGC +
Preference number: 6 (lower is better)
Translates to: HAEGIEAWESSR*WRWFCSPPTVC
Trigger: GCAGACAGTGGGAGGTGAGCAGAACCACCTCCAGCACCTGCTTGATTCCCAGGCCTCGATCCCCTCTGCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480424.6
CDS GCA 72 bp ACGGTGCGTGGCCACACAGTCACCAAGAACATGCTCTaGATGGCAGCATCCAGCGGCTGCGGCAAGTGTGAG +
Preference number: 6 (lower is better)
Translates to: TVRGHTVTKNML*MAASSGCGKCE
Trigger: CTCACACTTGCCGCAGCCGCTGGATGCTGCCATGCAGAGCATGTTCTTGGTGACTGTGTGGCCACGCACCGT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635935.1
CDS CCA 72 bp CCTGCAGAGACCAGGGCAGGCCCACACCTCATCAGCTaGGCAGGGTTCTCCGCCTTCCGTGTACTGAAGATT +
Preference number: 6 (lower is better)
Translates to: PAETRAGPHLIS*AGFSAFRVLKI
Trigger: AATCTTCAGTACACGGAAGGCGGAGAACCCTGCCCAGCTGATGAGGTGTGGGCCTGCCCTGGTCTCTGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470411.2
CDS CCA 72 bp CTCCCCACAGCCTCACATGCAGAGGGGATCGAGGCCTaGGAATCAAGCAGGTGCTGGAGGTGGTTCTGCTCA +
Preference number: 6 (lower is better)
Translates to: LPTASHAEGIEA*ESSRCWRWFCS
Trigger: TGAGCAGAACCACCTCCAGCACCTGCTTGATTCCCAGGCCTCGATCCCCTCTGCATGTGAGGCTGTGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480424.6
CDS CCA 72 bp TGCGTGGCCACACAGTCACCAAGAACATGCTCTGCATaGCAGCATCCAGCGGCTGCGGCAAGTGTGAGCAGC +
Preference number: 6 (lower is better)
Translates to: CVATQSPRTCSA*QHPAAAASVSS
Trigger: GCTGCTCACACTTGCCGCAGCCGCTGGATGCTGCCATGCAGAGCATGTTCTTGGTGACTGTGTGGCCACGCA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635935.1
CDS CCA 72 bp TTCCCCCGGAACAGACGCCACAGTGAGGACAGGCCATaGATCTTCAGGCAGTACAGCCTGGTCCAGTGCACG +
Preference number: 6 (lower is better)
Translates to: FPRNRRHSEDRP*IFRQYSLVQCT
Trigger: CGTGCACTGGACCAGGCTGTACTGCCTGAAGATCCATGGCCTGTCCTCACTGTGGCGTCTGTTCCGGGGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637468.1
CDS TCA 72 bp TGGCCGCAGGACCTGCTGGCGATGCTCACAGCCTGCTaGTGGTTTCTTCACAAAGCGACCTCTCCAGGGAAC +
Preference number: 6 (lower is better)
Translates to: WPQDLLAMLTAC*WFLHKATSPGN
Trigger: GTTCCCTGGAGAGGTCGCTTTGTGAAGAAACCATCAGCAGGCTGTGAGCATCGCCAGCAGGTCCTGCGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638152.1
CDS CCA 72 bp GCCCAGAAAATCCCAAGGCAGAAGAACAAAGGCCTGTaGCCTCAGGTCTCCAGGGTTCTGAACCCGCCAGCC +
Preference number: 6 (lower is better)
Translates to: AQKIPRQKNKGL*PQVSRVLNPPA
Trigger: GGCTGGCGGGTTCAGAACCCTGGAGACCTGAGGCCACAGGCCTTTGTTCTTCTGCCTTGGGATTTTCTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420990.6
ENST00000443147.5
CDS CCA 72 bp TTCCCCCGGAACAGACGCCACAGTGAGGACAGGCCATaGATCTTCAGGCAGTACAGCCTACAGGACGCAGTG +
Preference number: 6 (lower is better)
Translates to: FPRNRRHSEDRP*IFRQYSLQDAV
Trigger: CACTGCGTCCTGTAGGCTGTACTGCCTGAAGATCCATGGCCTGTCCTCACTGTGGCGTCTGTTCCGGGGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635935.1
CDS CCA 72 bp AGTCAGTCCGAATCACCGTCTCAGCTTCTCTGCAGCTaGGTCACGCTTGGGGCTGCAAGAGAGAGAATAAGG +
Preference number: 6 (lower is better)
Translates to: SQSESPSQLLCS*VTLGAARERIR
Trigger: CCTTATTCTCTCTCTTGCAGCCCCAAGCGTGACCCAGCTGCAGAGAAGCTGAGACGGTGATTCGGACTGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409527.6