Pregenerated sensors for PIGH (Homo sapiens)
Ensembl gene IDs: ENSG00000100564Ensembl transcript IDs: ENST00000216452.9, ENST00000561272.5
Found 19 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGTAACAGACCCAGAGAAAGCCCCATCCCTGTTTGGAATCCCTGCTaGGTCCTGGTTTCTTATTCTCTTCTTTGTAGGCTGTACTTTCGC | + |
|
Preference number: 1 (lower is better) Translates to: GNRPRESPIPVWNPC*VLVSYSLLCRLYFR Trigger: GCGAAAGTACAGCCTACAAAGAAGAGAATAAGAAACCAGGACTCAGCAGGGATTCCAAACAGGGATGGGGCTTTCTCTGGGTCTGTTACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561272.5 |
||
| 3UTR CCA 90 bp | GACCCAGAGAAAGCCCCATCCCTGTTTGGAATCCCTGCTGAGTCCTaGTTTCTTATTCTCTTCTTTGTAGGCTGTACTTTCGCAGTCAAG | + |
|
Preference number: 1 (lower is better) Translates to: DPEKAPSLFGIPAES*FLILFFVGCTFAVK Trigger: CTTGACTGCGAAAGTACAGCCTACAAAGAAGAGAATAAGAAACCAGGACTCAGCAGGGATTCCAAACAGGGATGGGGCTTTCTCTGGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561272.5 |
||
| 3UTR-3UTR TCA 90 bp | TTATTCTTTGTTAACATGAGAGTCCCATGTCTGAAAACCAAAGTCCAATTTCTGATGTGCTTGACACCATaGCTGAAATACTATGATCTT | + |
|
Preference number: 2 (lower is better) Translates to: LFFVNMRVPCLKTKVQFLMCLTP*LKYYDL Trigger: AAGATCATAGTATTTCAGTCATGGTGTCAAGCACAT...CAGAAATTGGACTTTGGTTTTCAGACATGGGACTCTCATGTTAACAAAGAATAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216452.9 |
||
| 3UTR-3UTR CAA 90 bp | CAGACCCAGAGAAAGCCCCATCCCTGTTTGGAATCCCTGCTGAGTCCTGGTTTCGAGAACGGCTGCTCCTaGCCTCTCAAACCAGTAGAG | + |
|
Preference number: 3 (lower is better) Translates to: QTQRKPHPCLESLLSPGFENGCS*PLKPVE Trigger: CTCTACTGGTTTGAGAGGCAAGGAGCAGCCGTTCTC...GAAACCAGGACTCAGCAGGGATTCCAAACAGGGATGGGGCTTTCTCTGGGTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561272.5 |
||
| 3UTR-3UTR CAA 90 bp | TTATTCTTTGTTAACATGAGAGTCCCATGTCTGAAAACCAAAGTCCAATTTCTGTTTGTCTCATCCTTCTaGGCAAAAGTAGCTTTTGAA | + |
|
Preference number: 3 (lower is better) Translates to: LFFVNMRVPCLKTKVQFLFVSSF*AKVAFE Trigger: TTCAAAAGCTACTTTTGCCAAGAAGGATGAGACAAA...CAGAAATTGGACTTTGGTTTTCAGACATGGGACTCTCATGTTAACAAAGAATAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000216452.9 |
||
| CDS-3UTR GCA 90 bp | CAGAGAAAGCCCCATCCCTGTTTGGAATCCCTGCTGAGTCCTGGTTTCTTATTCCGGACCGAGAACGGCTaGTCCTTGCCTCTCAAACCA | + |
|
Preference number: 4 (lower is better) Translates to: QRKPHPCLESLLSPGFLFRTENG*SLPLKP Trigger: TGGTTTGAGAGGCAAGGAGCAGCCGTTCTCGGTCCG...GAATAAGAAACCAGGACTCAGCAGGGATTCCAAACAGGGATGGGGCTTTCTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561272.5 |
||
| CDS-3UTR CCA 90 bp | AAGGGGAGACGGACCGAGAACGGCTGCTCCTTGCCTCTCAAACCAGTAGAGAGACTATCAACAAGGAATTaGCTCTTGAGATGGCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: KGRRTENGCSLPLKPVERLSTRN*LLRWLP Trigger: GGGCAGCCATCTCAAGAGCCAATTCCTTGTTGATAG...TCTCTCTACTGGTTTGAGAGGCAAGGAGCAGCCGTTCTCGGTCCGTCTCCCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561272.5 |
||
| CDS-3UTR CCA 90 bp | CAGAGAAAGCCCCATCCCTGTTTGGAATCCCTGCTGAGTCCTGGTTTCTTATTCATGCACCATGCAGCCTaGAAGACGGGTACTACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: QRKPHPCLESLLSPGFLFMHHAA*KTGTTW Trigger: CCAAGTAGTACCCGTCTTCCAGGCTGCATGGTGCAT...GAATAAGAAACCAGGACTCAGCAGGGATTCCAAACAGGGATGGGGCTTTCTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561272.5 |
||
| CDS-3UTR CCA 90 bp | CAAAGTCCAATTTCTGTCTGGCCTTTTGTCTCATCCTTCTTGGCAAAAGTAGCTAGTCCAGCCGGGGCTTaGCACTCTGGAAGACGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: QSPISVWPFVSSFLAKVASPAGA*HSGRRV Trigger: TACCCGTCTTCCAGAGTGCCAAGCCCCGGCTGGACT...AGCTACTTTTGCCAAGAAGGATGAGACAAAAGGCCAGACAGAAATTGGACTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000216452.9 |
||
| CDS-3UTR TCA 90 bp | CCTGCTGAGTCCTGGTTTCTTATTCTCTTCTTTGTAGGCTGTACTTTCGCAGTCGTTGCCAGCTTAGAATaGATGCACCATGCAGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PAESWFLILFFVGCTFAVVASLE*MHHAAW Trigger: CCAGGCTGCATGGTGCATTCATTCTAAGCTGGCAAC...GACTGCGAAAGTACAGCCTACAAAGAAGAGAATAAGAAACCAGGACTCAGCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561272.5 |
||
| CDS-3UTR GCA 90 bp | TTTGGAAATAAAGGTAACAGACCCAGAGAAAGCCCCATCCCTGTTTGGAATCCCGCAGGAGGGTCGGGTTaGCAGCTTAGAATGAATGCA | + |
|
Preference number: 4 (lower is better) Translates to: FGNKGNRPRESPIPVWNPAGGSG*QLRMNA Trigger: TGCATTCATTCTAAGCTGGCAACCCGACCCTCCTGC...GGGATTCCAAACAGGGATGGGGCTTTCTCTGGGTCTGTTACCTTTATTTCCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561272.5 |
||
| CDS-3UTR CCA 90 bp | AGAGTCCCATGTCTGAAAACCAAAGTCCAATTTCTGTCTGGCCTTTTGTCTCATCGGGGCTTGGCACTCTaGAAGACGGGTACTACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RVPCLKTKVQFLSGLLSHRGLAL*KTGTTW Trigger: CCAAGTAGTACCCGTCTTCCAGAGTGCCAAGCCCCG...ATGAGACAAAAGGCCAGACAGAAATTGGACTTTGGTTTTCAGACATGGGACTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000216452.9 |
||
| CDS-3UTR TCA 90 bp | TCCTGGTTTCTTATTCTCTTCTTTGTAGGCTGTACTTTCGCAGTCAAGTCAAAGCAAGGAATTGGCTCTTaGGATGGCTGCCCTGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: SWFLILFFVGCTFAVKSKQGIGS*DGCPDG Trigger: GCCATCAGGGCAGCCATCTCAAGAGCCAATTCCTTG...CTTTGACTTGACTGCGAAAGTACAGCCTACAAAGAAGAGAATAAGAAACCAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561272.5 |
||
| CDS-3UTR CCA 90 bp | CAAAGTCCAATTTCTGTCTGGCCTTTTGTCTCATCCTTCTTGGCAAAAGTAGCTAGTCCAATTTCTGTCTaGCCTTTTGTCTCATCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QSPISVWPFVSSFLAKVASPISV*PFVSSF Trigger: GAAGGATGAGACAAAAGGCCAGACAGAAATTGGACT...AGCTACTTTTGCCAAGAAGGATGAGACAAAAGGCCAGACAGAAATTGGACTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000216452.9 |
||
| CDS-3UTR TCA 90 bp | AGAGTCCCATGTCTGAAAACCAAAGTCCAATTTCTGTCTGGCCTTTTGTCTCATATGTGCTTGACACCATaGCTGAAATACTATGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: RVPCLKTKVQFLSGLLSHMCLTP*LKYYDL Trigger: AAGATCATAGTATTTCAGTCATGGTGTCAAGCACAT...ATGAGACAAAAGGCCAGACAGAAATTGGACTTTGGTTTTCAGACATGGGACTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000216452.9 |
||
| CDS-3UTR CAA 90 bp | CAGAGAAAGCCCCATCCCTGTTTGGAATCCCTGCTGAGTCCTGGTTTCTTATTCGAGAACGGCTGCTCCTaGCCTCTCAAACCAGTAGAG | + |
|
Preference number: 5 (lower is better) Translates to: QRKPHPCLESLLSPGFLFENGCS*PLKPVE Trigger: CTCTACTGGTTTGAGAGGCAAGGAGCAGCCGTTCTC...GAATAAGAAACCAGGACTCAGCAGGGATTCCAAACAGGGATGGGGCTTTCTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561272.5 |
||
| CDS-3UTR CAA 90 bp | TCTCTTCTTTGTAGGCTGTACTTTCGCAGTCAAGTCAAAGGGGAGACGGACCGACCTATCAACAAGGAATaGGCTCTTGAGATGGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: SLLCRLYFRSQVKGETDRPINKE*ALEMAA Trigger: GGCAGCCATCTCAAGAGCCAATTCCTTGTTGATAGG...TCGGTCCGTCTCCCCTTTGACTTGACTGCGAAAGTACAGCCTACAAAGAAGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561272.5 |
||
| CDS-3UTR CAA 90 bp | GCTATCTGTGAACCAGGTAACTGTGTGTTTTGGAAGATCTGTTTATTAACAGTATTTGTCTCATCCTTCTaGGCAAAAGTAGCTTTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: AICEPGNCVFWKICLLTVFVSSF*AKVAFE Trigger: TTCAAAAGCTACTTTTGCCAAGAAGGATGAGACAAA...TACTGTTAATAAACAGATCTTCCAAAACACACAGTTACCTGGTTCACAGATAGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000216452.9 |
||
| CDS CAA 90 bp | ACCAGTAGAGAGATAGTGGCAGGGAGGTTTCCTATCAACAAGGAATaGGCTCTTGAGATGGCTGCCCTGATGGCCCAGGTAAGGTTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: TSREIVAGRFPINKE*ALEMAALMAQVRFC Trigger: ACAGAACCTTACCTGGGCCATCAGGGCAGCCATCTCAAGAGCCAATTCCTTGTTGATAGGAAACCTCCCTGCCACTATCTCTCTACTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561272.5 |
||