Pregenerated sensors for PIGA (Homo sapiens)
Ensembl gene IDs: ENSG00000165195Ensembl transcript IDs: ENST00000474662.2, ENST00000634286.1, ENST00000634484.1, ENST00000635480.1
Found 29 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | ATATTTCTGACAGAGTTCAGGTATTATACCACTAAGCAAATCGATCCCACTACAACAGAAGGAAGCAGGTaGGCGTGCCTACACATGCAG | + |
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Preference number: 4 (lower is better) Translates to: IFLTEFRYYTTKQIDPTTTEGSR*ACLHMQ Trigger: CTGCATGTGTAGGCACGCTCACCTGCTTCCTTCTGT...TGTAGTGGGATCGATTTGCTTAGTGGTATAATACCTGAACTCTGTCAGAAATAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000634286.1 |
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| CDS-3UTR GCA 90 bp | ATATTTCTGACAGAGTTCAGGTATTATACCACTAAGCAAATCGATCCCACTACAGAGCGTGCCTACACATaGAGAGTGCTGGTAAATCCT | + |
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Preference number: 4 (lower is better) Translates to: IFLTEFRYYTTKQIDPTTERAYT*RVLVNP Trigger: AGGATTTACCAGCACTCTGCATGTGTAGGCACGCTC...TGTAGTGGGATCGATTTGCTTAGTGGTATAATACCTGAACTCTGTCAGAAATAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000634286.1 |
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| CDS-3UTR TCA 90 bp | ATATTTCTGACAGAGTTCAGGTATTATACCACTAAGCAAATCGATCCCACTACAGGTCCAATAAACTCCTaGGCAATGGCAGACTGTGAA | + |
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Preference number: 4 (lower is better) Translates to: IFLTEFRYYTTKQIDPTTGPINS*AMADCE Trigger: TTCACAGTCTGCCATTGCTCAGGAGTTTATTGGACC...TGTAGTGGGATCGATTTGCTTAGTGGTATAATACCTGAACTCTGTCAGAAATAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000634286.1 |
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| CDS-3UTR TCA 90 bp | ATATTTCTGACAGAGTTCAGGTATTATACCACTAAGCAAATCGATCCCACTACACTGGTAAATCCTGACTaGGAGCAAAACAGGCTTGGA | + |
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Preference number: 4 (lower is better) Translates to: IFLTEFRYYTTKQIDPTTLVNPD*EQNRLG Trigger: TCCAAGCCTGTTTTGCTCTCAGTCAGGATTTACCAG...TGTAGTGGGATCGATTTGCTTAGTGGTATAATACCTGAACTCTGTCAGAAATAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000634286.1 |
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| CDS-3UTR CCA 90 bp | ATATTTCTGACAGAGTTCAGGTATTATACCACTAAGCAAATCGATCCCACTACACTTAAGACATTCCAGTaGGACTTTGATATCTGGTCC | + |
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Preference number: 4 (lower is better) Translates to: IFLTEFRYYTTKQIDPTTLKTFQ*DFDIWS Trigger: GGACCAGATATCAAAGTCCCACTGGAATGTCTTAAG...TGTAGTGGGATCGATTTGCTTAGTGGTATAATACCTGAACTCTGTCAGAAATAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000634286.1 |
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| CDS TCA 90 bp | GCAGGTGAGCGTGCCTACACATGCAGAGTGCTGGTAAATCCTGACTaGGAGCAAAACAGGCTTGGAAGAGGAGGCTCAGGAAAAAGACAT | + |
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Preference number: 5 (lower is better) Translates to: AGERAYTCRVLVNPD*EQNRLGRGGSGKRH Trigger: ATGTCTTTTTCCTGAGCCTCCTCTTCCAAGCCTGTTTTGCTCTCAGTCAGGATTTACCAGCACTCTGCATGTGTAGGCACGCTCACCTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000634286.1 ENST00000634484.1 |
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| CDS CCA 90 bp | AGGAATGGACCATTAATACAACTACTCACTTTTGGGCTACAGGCATaGCTGTTCCTTTTCAGAATGTTACTTTCTGCAGGGTGCCTGGCA | + |
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Preference number: 5 (lower is better) Translates to: RNGPLIQLLTFGLQA*LFLFRMLLSAGCLA Trigger: TGCCAGGCACCCTGCAGAAAGTAACATTCTGAAAAGGAACAGCCATGCCTGTAGCCCAAAAGTGAGTAGTTGTATTAATGGTCCATTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000634484.1 |
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| CDS GCA 90 bp | CTACAGGCATGGCTGTTCCTTTTCAGAATGTTACTTTCTGCAGGGTaGCTGGCATCTGGAGAGGGTTCGATAAATAACTGTTCAATTACT | + |
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Preference number: 5 (lower is better) Translates to: LQAWLFLFRMLLSAG*LASGEGSINNCSIT Trigger: AGTAATTGAACAGTTATTTATCGAACCCTCTCCAGATGCCAGGCACCCTGCAGAAAGTAACATTCTGAAAAGGAACAGCCATGCCTGTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000634484.1 |
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| CDS GCA 90 bp | GCCTCTAAGAAGGGTATAATGCAATGGAACCTAGAGACTTTCGACTaGCATGTGAACACAAAACAGACAATGAAAATCTCTGATCCAAAC | + |
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Preference number: 5 (lower is better) Translates to: ASKKGIMQWNLETFD*HVNTKQTMKISDPN Trigger: GTTTGGATCAGAGATTTTCATTGTCTGTTTTGTGTTCACATGGCAGTCGAAAGTCTCTAGGTTCCATTGCATTATACCCTTCTTAGAGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000634484.1 |
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| CDS CCA 90 bp | AAGGAAAACTTTGATTTATCCTCTCTCTCACTTAAGACATTCCAGTaGGACTTTGATATCTGGTCCAATAAACTCCTGAGCAATGGCAGA | + |
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Preference number: 5 (lower is better) Translates to: KENFDLSSLSLKTFQ*DFDIWSNKLLSNGR Trigger: TCTGCCATTGCTCAGGAGTTTATTGGACCAGATATCAAAGTCCCACTGGAATGTCTTAAGTGAGAGAGAGGATAAATCAAAGTTTTCCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000634286.1 |
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| CDS TCA 90 bp | GTAACAGGTTTAATCTTTGCATGGGTAGTTAATTTTGCTGATCCTTaGTCACACTTGTGTCATACTCTTTCTCAGCTAGCCATCTCAAGA | + |
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Preference number: 5 (lower is better) Translates to: VTGLIFAWVVNFADP*SHLCHTLSQLAISR Trigger: TCTTGAGATGGCTAGCTGAGAAAGAGTATGACACAAGTGTGATCAAGGATCAGCAAAATTAACTACCCATGCAAAGATTAAACCTGTTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000634484.1 |
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| CDS-3UTR CAA 90 bp | ATATTTCTGACAGAGTTCAGGTATTATACCACTAAGCAAATCGATCCCACTACACATTCCAGTGGGACTTaGATATCTGGTCCAATAAAC | + |
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Preference number: 5 (lower is better) Translates to: IFLTEFRYYTTKQIDPTTHSSGT*ISGPIN Trigger: GTTTATTGGACCAGATATCAAAGTCCCACTGGAATG...TGTAGTGGGATCGATTTGCTTAGTGGTATAATACCTGAACTCTGTCAGAAATAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000634286.1 |
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| CDS CCA 90 bp | AAGGAAAACTTTGATTTATCCTCTCTCTCACTTAAGACATTCCAGTaGGACTTTGATATCTGGTCCAATAAACTCCTGAGGAAATTAATT | + |
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Preference number: 5 (lower is better) Translates to: KENFDLSSLSLKTFQ*DFDIWSNKLLRKLI Trigger: AATTAATTTCCTCAGGAGTTTATTGGACCAGATATCAAAGTCCCACTGGAATGTCTTAAGTGAGAGAGAGGATAAATCAAAGTTTTCCTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000634484.1 |
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| CDS TCA 72 bp | CGTGCCTACACATGCAGAGTGCTGGTAAATCCTGACTaGGAGCAAAACAGGCTTGGAAGAGGAGGCTCAGGA | + |
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Preference number: 6 (lower is better) Translates to: RAYTCRVLVNPD*EQNRLGRGGSG Trigger: TCCTGAGCCTCCTCTTCCAAGCCTGTTTTGCTCTCAGTCAGGATTTACCAGCACTCTGCATGTGTAGGCACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000634286.1 ENST00000634484.1 |
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| CDS TCA 72 bp | ACTAAGCAAATCGATCCCACTACAGAAGGAAGCAGGTaGGCGTGCCTACACATGCAGAGTGCTGGTAAATCC | + |
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Preference number: 6 (lower is better) Translates to: TKQIDPTTEGSR*ACLHMQSAGKS Trigger: GGATTTACCAGCACTCTGCATGTGTAGGCACGCTCACCTGCTTCCTTCTGTAGTGGGATCGATTTGCTTAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000634286.1 |
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| CDS CAA 72 bp | GAGAGAAACTCTCTTAAACCTTTTCCAGGAGTGGAATaGTTTGCAAACTGGCAGTGGTCCCCCAAGAGTTAC | + |
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Preference number: 6 (lower is better) Translates to: ERNSLKPFPGVE*FANWQWSPKSY Trigger: GTAACTCTTGGGGGACCACTGCCAGTTTGCAAACAATTCCACTCCTGGAAAAGGTTTAAGAGAGTTTCTCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000635480.1 |
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| CDS TCA 72 bp | GATAACATCTACCCTACAGTTGTTGGGAGGGTCAAATaGGGTATTGTACCACGAACAGGCTTTATCAACTGC | + |
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Preference number: 6 (lower is better) Translates to: DNIYPTVVGRVK*GIVPRTGFINC Trigger: GCAGTTGATAAAGCCTGTTCGTGGTACAATACCTCATTTGACCCTCCCAACAACTGTAGGGTAGATGTTATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000634484.1 |
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| CDS CAA 72 bp | TCTACCCTACAGTTGTTGGGAGGGTCAAATGAGGTATaGTACCACGAACAGGCTTTATCAACTGCAGAATAC | + |
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Preference number: 6 (lower is better) Translates to: STLQLLGGSNEV*YHEQALSTAEY Trigger: GTATTCTGCAGTTGATAAAGCCTGTTCGTGGTACAATACCTCATTTGACCCTCCCAACAACTGTAGGGTAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000634484.1 |
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| CDS CAA 90 bp | CTGGCATCTGGAGAGGGTTCGATAAATAACTGTTCAATTACTGAATaGAGTACAGGAAAGGCCATACCATCACTCCATTGGTGGTTAGCT | + |
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Preference number: 6 (lower is better) Translates to: LASGEGSINNCSITE*STGKAIPSLHWWLA Trigger: AGCTAACCACCAATGGAGTGATGGTATGGCCTTTCCTGTACTCAATTCAGTAATTGAACAGTTATTTATCGAACCCTCTCCAGATGCCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000634484.1 |
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| CDS CCA 72 bp | CCATTAATACAACTACTCACTTTTGGGCTACAGGCATaGCTGTTCCTTTTCAGAATGTTACTTTCTGCAGGG | + |
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Preference number: 6 (lower is better) Translates to: PLIQLLTFGLQA*LFLFRMLLSAG Trigger: CCCTGCAGAAAGTAACATTCTGAAAAGGAACAGCCATGCCTGTAGCCCAAAAGTGAGTAGTTGTATTAATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000634484.1 |
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| CDS CAA 72 bp | GAAACTCTCTTAAACCTTTTCCAGGAGTGGAATTGTTaGCAAACTGGCAGTGGTCCCCCAAGAGTTACAATT | + |
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Preference number: 6 (lower is better) Translates to: ETLLNLFQEWNC*QTGSGPPRVTI Trigger: AATTGTAACTCTTGGGGGACCACTGCCAGTTTGCAAACAATTCCACTCCTGGAAAAGGTTTAAGAGAGTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000635480.1 |
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| CDS CCA 72 bp | ATTTATTCTGGAGCCTCTAAGAAGGGTATAATGCAATaGAACCTAGAGACTTTCGACTGCCATGTGAACACA | + |
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Preference number: 6 (lower is better) Translates to: IYSGASKKGIMQ*NLETFDCHVNT Trigger: TGTGTTCACATGGCAGTCGAAAGTCTCTAGGTTCCATTGCATTATACCCTTCTTAGAGGCTCCAGAATAAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000634484.1 |
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| CDS CAA 72 bp | GGAGAGGGTTCGATAAATAACTGTTCAATTACTGAATaGAGTACAGGAAAGGCCATACCATCACTCCATTGG | + |
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Preference number: 6 (lower is better) Translates to: GEGSINNCSITE*STGKAIPSLHW Trigger: CCAATGGAGTGATGGTATGGCCTTTCCTGTACTCAATTCAGTAATTGAACAGTTATTTATCGAACCCTCTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000634484.1 |
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| CDS CCA 72 bp | TTTGATTTATCCTCTCTCTCACTTAAGACATTCCAGTaGGACTTTGATATCTGGTCCAATAAACTCCTGAGC | + |
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Preference number: 6 (lower is better) Translates to: FDLSSLSLKTFQ*DFDIWSNKLLS Trigger: GCTCAGGAGTTTATTGGACCAGATATCAAAGTCCCACTGGAATGTCTTAAGTGAGAGAGAGGATAAATCAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000634286.1 |
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| CDS CCA 72 bp | TTTGATTTATCCTCTCTCTCACTTAAGACATTCCAGTaGGACTTTGATATCTGGTCCAATAAACTCCTGAGG | + |
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Preference number: 6 (lower is better) Translates to: FDLSSLSLKTFQ*DFDIWSNKLLR Trigger: CCTCAGGAGTTTATTGGACCAGATATCAAAGTCCCACTGGAATGTCTTAAGTGAGAGAGAGGATAAATCAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000634484.1 |
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| CDS TCA 72 bp | TTAATCTTTGCATGGGTAGTTAATTTTGCTGATCCTTaGTCACACTTGTGTCATACTCTTTCTCAGCTAGCC | + |
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Preference number: 6 (lower is better) Translates to: LIFAWVVNFADP*SHLCHTLSQLA Trigger: GGCTAGCTGAGAAAGAGTATGACACAAGTGTGATCAAGGATCAGCAAAATTAACTACCCATGCAAAGATTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000634484.1 |
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| CDS CCA 72 bp | AATAAGGAATGGACCATTAATACAACTACTCACTTTTaGGCTACAGGCATGGCTGTTCCTTTTCAGAATGTT | + |
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Preference number: 6 (lower is better) Translates to: NKEWTINTTTHF*ATGMAVPFQNV Trigger: AACATTCTGAAAAGGAACAGCCATGCCTGTAGCCCAAAAGTGAGTAGTTGTATTAATGGTCCATTCCTTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000634484.1 |
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| CDS TCA 72 bp | ATAGAGATAATTGACATCTTCTCCCTCAAGACAACATaGAATTCATCAATACCTGTCATGCAGCTGGTATCT | + |
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Preference number: 6 (lower is better) Translates to: IEIIDIFSLKTT*NSSIPVMQLVS Trigger: AGATACCAGCTGCATGACAGGTATTGATGAATTTCATGTTGTCTTGAGGGAGAAGATGTCAATTATCTCTAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000474662.2 |
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| CDS TCA 72 bp | AAAAATTCACCAGAACGACTGAGAATCCACTTATTTTaGAAAGTATTAGCTATGCACTCCATAAAGGAGAGA | + |
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Preference number: 6 (lower is better) Translates to: KNSPERLRIHLF*KVLAMHSIKER Trigger: TCTCTCCTTTATGGAGTGCATAGCTAATACTTTTCAAAATAAGTGGATTCTCAGTCGTTCTGGTGAATTTTT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000635480.1 |
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