RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PIDD1 (Homo sapiens)

Ensembl gene IDs: ENSG00000177595

Ensembl transcript IDs: ENST00000347755.10, ENST00000411829.6, ENST00000524486.5, ENST00000525028.6, ENST00000527357.5, ENST00000527812.1, ENST00000530911.1, ENST00000531286.5, ENST00000534525.5, ENST00000534649.2

Found 726 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGCTCAGGGTCCCGGCGCCGCTGCAGAGCGATGAGGTTCACACGGTaGAGCCGCAGCCGCTCCCAGGCCTTCCGAGCCAGGCCTCCCACA +
Preference number: 1 (lower is better)
Translates to: CSGSRRRCRAMRFTR*SRSRSQAFRARPPT
Trigger: TGTGGGAGGCCTGGCTCGGAAGGCCTGGGAGCGGCTGCGGCTGCACCGTGTGAACCTCATCGCTCTGCAGCGGCGCCGGGACCCTGAGCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
3UTR GCA 90 bp CGGCGGCCGAGCTCCAAGACTGCGCGCACCTCTTCAGCCACGTCCTaGCGGTCACTCTGCTCCAGGGCCTGCACCAGGAGCCCCACAGCC +
Preference number: 1 (lower is better)
Translates to: RRPSSKTARTSSATS*RSLCSRACTRSPTA
Trigger: GGCTGTGGGGCTCCTGGTGCAGGCCCTGGAGCAGAGTGACCGGCAGGACGTGGCTGAAGAGGTGCGCGCAGTCTTGGAGCTCGGCCGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
3UTR TCA 90 bp CAGGGGGCAGGTCCCGGAGCTGGTTGTCCCTCAGGTCGAGCCGGGTaGGGAGTGGAAGGCGGGCCAAGTCAGCTGGCACAGAGGCCAGGA +
Preference number: 1 (lower is better)
Translates to: QGAGPGAGCPSGRAG*GVEGGPSQLAQRPG
Trigger: TCCTGGCCTCTGTGCCAGCTGACTTGGCCCGCCTTCCACTCCTCACCCGGCTCGACCTGAGGGACAACCAGCTCCGGGACCTGCCCCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
3UTR GCA 90 bp AAGTCTCGGCAGCTTGATGGGCAGAGTGGCCATCCACAGGGCGTCTaGGCCCTTCCTCTGCCGGGCAGCCTCAGCCTCCTCGGGCACCCG +
Preference number: 1 (lower is better)
Translates to: KSRQLDGQSGHPQGV*ALPLPGSLSLLGHP
Trigger: CGGGTGCCCGAGGAGGCTGAGGCTGCCCGGCAGAGGAAGGGCGCAGACGCCCTGTGGATGGCCACTCTGCCCATCAAGCTGCCGAGACTT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
3UTR GCA 90 bp TGCAGGACAAGGAGCCGCAAGGACCGAAGTCCCGCTGCGGGCAGTTaGTGGCTTAGGCTTGGCACCAGCCCAGCCCACGGCGCTGGGACA +
Preference number: 1 (lower is better)
Translates to: CRTRSRKDRSPAAGS*WLRLGTSPAHGAGT
Trigger: TGTCCCAGCGCCGTGGGCTGGGCTGGTGCCAAGCCTAAGCCAGCAACTGCCCGCAGCGGGACTTCGGTCCTTGCGGCTCCTTGTCCTGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524486.5
3UTR GCA 90 bp AGGGTGGCGTCCACCTTGTTTCGGGGCAGGCACTGCAGCAGGACCTaGTCAGGGTCCCGGCGCCGCTGCAGAGCGATGAGGTTCACACGG +
Preference number: 1 (lower is better)
Translates to: RVASTLFRGRHCSRT*SGSRRRCRAMRFTR
Trigger: CCGTGTGAACCTCATCGCTCTGCAGCGGCGCCGGGACCCTGAGCAGGTCCTGCTGCAGTGCCTGCCCCGAAACAAGGTGGACGCCACCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
3UTR CCA 90 bp AGGACAAGGAGCCGCAAGGACCGAAGTCCCGCTGCGGGCAGTTGCTaGCTTAGGCTTGGCACCAGCCCAGCCCACGGCGCTGGGACACTC +
Preference number: 1 (lower is better)
Translates to: RTRSRKDRSPAAGSC*LRLGTSPAHGAGTL
Trigger: GAGTGTCCCAGCGCCGTGGGCTGGGCTGGTGCCAAGCCTAAGCCAGCAACTGCCCGCAGCGGGACTTCGGTCCTTGCGGCTCCTTGTCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524486.5
3UTR CCA 90 bp ATTCCGGGTCCTGACCACCACTTCACGGCAGCGCCGGGCCTGCGGTaGGGTGAAGAGCAGCCACAGCCCCACATCCTGCTGGAAGGCCAC +
Preference number: 1 (lower is better)
Translates to: IPGPDHHFTAAPGLR*GEEQPQPHILLEGH
Trigger: GTGGCCTTCCAGCAGGATGTGGGGCTGTGGCTGCTCTTCACCCCACCGCAGGCCCGGCGCTGCCGTGAAGTGGTGGTCAGGACCCGGAAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
3UTR GCA 90 bp GGAAGGCGGGCCAAGTCAGCTGGCACAGAGGCCAGGAGGTTGCTGTaGAGGACAAGGAGCCGCAAGGACCGAAGTCCCGCTGCGGGCAGT +
Preference number: 1 (lower is better)
Translates to: GRRAKSAGTEARRLL*RTRSRKDRSPAAGS
Trigger: ACTGCCCGCAGCGGGACTTCGGTCCTTGCGGCTCCTTGTCCTGCACAGCAACCTCCTGGCCTCTGTGCCAGCTGACTTGGCCCGCCTTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524486.5
3UTR GCA 90 bp GGAGTGGAAGGCGGGCCAAGTCAGCTGGCACAGAGGCCAGGAGGTTaGTGTGCAGGACAAGGAGCCGCAAGGACCGAAGTCCCGCTGCGG +
Preference number: 1 (lower is better)
Translates to: GVEGGPSQLAQRPGG*CAGQGAARTEVPLR
Trigger: CCGCAGCGGGACTTCGGTCCTTGCGGCTCCTTGTCCTGCACAGCAACCTCCTGGCCTCTGTGCCAGCTGACTTGGCCCGCCTTCCACTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524486.5
3UTR GCA 90 bp GCGTCGGATGCTGTCCTGGTACTTGCGGCGGCCGAGCTCCAAGACTaGGCGCACCTCTTCAGCCACGTCCTGCCGGTCACTCTGCTCCAG +
Preference number: 1 (lower is better)
Translates to: ASDAVLVLAAAELQD*AHLFSHVLPVTLLQ
Trigger: CTGGAGCAGAGTGACCGGCAGGACGTGGCTGAAGAGGTGCGCGCAGTCTTGGAGCTCGGCCGCCGCAAGTACCAGGACAGCATCCGACGC
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
3UTR GCA 90 bp GGTCCTTGGGGGCCAAGCCCATGCGTCGGATGCTGTCCTGGTACTTaGGGCGGCCGAGCTCCAAGACTGCGCGCACCTCTTCAGCCACGT +
Preference number: 1 (lower is better)
Translates to: GPWGPSPCVGCCPGT*GGRAPRLRAPLQPR
Trigger: ACGTGGCTGAAGAGGTGCGCGCAGTCTTGGAGCTCGGCCGCCGCAAGTACCAGGACAGCATCCGACGCATGGGCTTGGCCCCCAAGGACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
3UTR CCA 90 bp CAGGTCCCGGAGCTGGTTGTCCCTCAGGTCGAGCCGGGTGAGGAGTaGAAGGCGGGCCAAGTCAGCTGGCACAGAGGCCAGGAGGTTGCT +
Preference number: 1 (lower is better)
Translates to: QVPELVVPQVEPGEE*KAGQVSWHRGQEVA
Trigger: AGCAACCTCCTGGCCTCTGTGCCAGCTGACTTGGCCCGCCTTCCACTCCTCACCCGGCTCGACCTGAGGGACAACCAGCTCCGGGACCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
3UTR CCA 90 bp AGAGCGGGGTCCTTGGGGGCCAAGCCCATGCGTCGGATGCTGTCCTaGTACTTGCGGCGGCCGAGCTCCAAGACTGCGCGCACCTCTTCA +
Preference number: 1 (lower is better)
Translates to: RAGSLGAKPMRRMLS*YLRRPSSKTARTSS
Trigger: TGAAGAGGTGCGCGCAGTCTTGGAGCTCGGCCGCCGCAAGTACCAGGACAGCATCCGACGCATGGGCTTGGCCCCCAAGGACCCCGCTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
3UTR TCA 90 bp GCGGGGAGGGCCCCCAGAGCCTCAGGCAGCTCAGAGAGGCAGTTGTaGGACAGCAAGAGCGCACCCAGACCTCGCATCTGCAGGACACAG +
Preference number: 1 (lower is better)
Translates to: AGRAPRASGSSERQL*DSKSAPRPRICRTQ
Trigger: CTGTGTCCTGCAGATGCGAGGTCTGGGTGCGCTCTTGCTGTCTCACAACTGCCTCTCTGAGCTGCCTGAGGCTCTGGGGGCCCTCCCCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
3UTR GCA 90 bp TTGTCATTCCGGGTCCTGACCACCACTTCACGGCAGCGCCGGGCCTaGGGTGGGGTGAAGAGCAGCCACAGCCCCACATCCTGCTGGAAG +
Preference number: 1 (lower is better)
Translates to: LSFRVLTTTSRQRRA*GGVKSSHSPTSCWK
Trigger: CTTCCAGCAGGATGTGGGGCTGTGGCTGCTCTTCACCCCACCGCAGGCCCGGCGCTGCCGTGAAGTGGTGGTCAGGACCCGGAATGACAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
3UTR GCA 90 bp GTGATGTCATCCCAGGTGGCTGCAGGAGGGGCCCAGTACAACAGGTaGAGGCGGGAGCGGTCCAGACTGAGGCCTGTGATGCCAGAGGGC +
Preference number: 1 (lower is better)
Translates to: VMSSQVAAGGAQYNR*RRERSRLRPVMPEG
Trigger: GCCCTCTGGCATCACAGGCCTCAGTCTGGACCGCTCCCGCCTGCACCTGTTGTACTGGGCCCCTCCTGCAGCCACCTGGGATGACATCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
3UTR GCA 90 bp GGAAGGCGGGCCAAGTCAGCTGGCACAGAGGCCAGGAGGTTGCTGTaGAGGACAAGGAGCCGCAAGGACCGAAGTCCCGCCAGAGAGGCT +
Preference number: 1 (lower is better)
Translates to: GRRAKSAGTEARRLL*RTRSRKDRSPAREA
Trigger: AGCCTCTCTGGCGGGACTTCGGTCCTTGCGGCTCCTTGTCCTGCACAGCAACCTCCTGGCCTCTGTGCCAGCTGACTTGGCCCGCCTTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525028.6
3UTR GCA 90 bp GGAGTGGAAGGCGGGCCAAGTCAGCTGGCACAGAGGCCAGGAGGTTaGTGTGCAGGACAAGGAGCCGCAAGGACCGAAGTCCCGCCAGAG +
Preference number: 1 (lower is better)
Translates to: GVEGGPSQLAQRPGG*CAGQGAARTEVPPE
Trigger: CTCTGGCGGGACTTCGGTCCTTGCGGCTCCTTGTCCTGCACAGCAACCTCCTGGCCTCTGTGCCAGCTGACTTGGCCCGCCTTCCACTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525028.6
3UTR CCA 90 bp CCTCAGGTCGAGCCGGGTGAGGAGTGGAAGGCGGGCCAAGTCAGCTaGCACAGAGGCCAGGAGGTTGCTGTGCAGGACAAGGAGCCGCAA +
Preference number: 1 (lower is better)
Translates to: PQVEPGEEWKAGQVS*HRGQEVAVQDKEPQ
Trigger: TTGCGGCTCCTTGTCCTGCACAGCAACCTCCTGGCCTCTGTGCCAGCTGACTTGGCCCGCCTTCCACTCCTCACCCGGCTCGACCTGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
3UTR CCA 90 bp GTAGCGTGTCCAGCAGATTCTGAGAGAGATCGAGGCGCTGCAGGGTaGATAGGGCCCCCAGTGCTGGGGGCAGCGTCTGCAGGCGGTTGT +
Preference number: 1 (lower is better)
Translates to: VACPADSERDRGAAG*IGPPVLGAASAGGC
Trigger: ACAACCGCCTGCAGACGCTGCCCCCAGCACTGGGGGCCCTATCCACCCTGCAGCGCCTCGATCTCTCTCAGAATCTGCTGGACACGCTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
3UTR CCA 90 bp CCGAGGAGCACAGCAGTGTCCCCTCCGGTGGCACCAGGCAGGCATTaGACACAGGGCGGGAAACCACAAGGAACCAGGAGAAGTGGGGCA +
Preference number: 1 (lower is better)
Translates to: PRSTAVSPPVAPGRH*TQGGKPQGTRRSGA
Trigger: TGCCCCACTTCTCCTGGTTCCTTGTGGTTTCCCGCCCTGTGTCCAATGCCTGCCTGGTGCCACCGGAGGGGACACTGCTGTGCTCCTCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
3UTR TCA 90 bp CTGCCCAGGCCTCCAATCTCAGGAGGTAGCGTGTCCAGCAGATTCTaGGAGAGATCGAGGCGCTGCAGGGTGGATAGGGCCCCCAGTGCT +
Preference number: 1 (lower is better)
Translates to: LPRPPISGGSVSSRF*ERSRRCRVDRAPSA
Trigger: AGCACTGGGGGCCCTATCCACCCTGCAGCGCCTCGATCTCTCTCAGAATCTGCTGGACACGCTACCTCCTGAGATTGGAGGCCTGGGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
3UTR CCA 90 bp TTTGACCCCAGGATGACCCGAGGAGCACAGCAGTGTCCCCTCCGGTaGCACCAGGCAGGCATTGGACACAGGGCGGGAAACCACAAGGAA +
Preference number: 1 (lower is better)
Translates to: FDPRMTRGAQQCPLR*HQAGIGHRAGNHKE
Trigger: TTCCTTGTGGTTTCCCGCCCTGTGTCCAATGCCTGCCTGGTGCCACCGGAGGGGACACTGCTGTGCTCCTCGGGTCATCCTGGGGTCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
3UTR CCA 90 bp AGAACTCTGACAAAGCCACTGAGGGAGTCTCAAAGGCCAGGGAGGTaGAGGGACAACCAAGAGGCAGCTGTGGACCAAGCCTGTGGGTGC +
Preference number: 1 (lower is better)
Translates to: RTLTKPLRESQRPGR*RDNQEAAVDQACGC
Trigger: GCACCCACAGGCTTGGTCCACAGCTGCCTCTTGGTTGTCCCTCCACCTCCCTGGCCTTTGAGACTCCCTCAGTGGCTTTGTCAGAGTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524486.5
3UTR GCA 90 bp CCTCCTTCACATTCTTCAGGTGCGAGTAGAAGACAAAGCAGATTCTaGCCTCCACACAGTCAGGGCGGTCAGCATCCACGTCGATGCCGC +
Preference number: 1 (lower is better)
Translates to: PPSHSSGASRRQSRF*PPHSQGGQHPRRCR
Trigger: GCGGCATCGACGTGGATGCTGACCGCCCTGACTGTGTGGAGGGCAGAATCTGCTTTGTCTTCTACTCGCACCTGAAGAATGTGAAGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
3UTR-3UTR CCA 90 bp GCCGGATGCGCTGCACCTCCCGGTAGGACACCCCCAGGTGCAGGGCCACGGCTGCGAGGCGCTGCAGGGTaGATAGGGCCCCCAGTGCTG +
Preference number: 2 (lower is better)
Translates to: AGCAAPPGRTPPGAGPRLRGAAG*IGPPVL
Trigger: CAGCACTGGGGGCCCTATCCACCCTGCAGCGCCTCG...CAGCCGTGGCCCTGCACCTGGGGGTGTCCTACCGGGAGGTGCAGCGCATCCGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
3UTR CAA 90 bp GCCGCAAGGACCGAAGTCCCGCTGCGGGCAGTTGCTGGCTTAGGCTaGGCACCAGCCCAGCCCACGGCGCTGGGACACTCCTGCTGCCGC +
Preference number: 2 (lower is better)
Translates to: AARTEVPLRAVAGLG*APAQPTALGHSCCR
Trigger: GCGGCAGCAGGAGTGTCCCAGCGCCGTGGGCTGGGCTGGTGCCAAGCCTAAGCCAGCAACTGCCCGCAGCGGGACTTCGGTCCTTGCGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524486.5
3UTR-3UTR CCA 90 bp CCGCAGCCGCTCCCAGGCCTTCCGAGCCAGGCCTCCCACACAGTTCTTGGTGGTCAGGGGGACGAGGCCTaGCTCCGGCAGCAGCAGCCG +
Preference number: 2 (lower is better)
Translates to: PQPLPGLPSQASHTVLGGQGDEA*LRQQQP
Trigger: CGGCTGCTGCTGCCGGAGCCAGGCCTCGTCCCCCTG...ACCACCAAGAACTGTGTGGGAGGCCTGGCTCGGAAGGCCTGGGAGCGGCTGCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
3UTR-3UTR TCA 90 bp CCCTCGAACATCTCCACCGTGTCAGAGGGCTCGGGGCCCCGGTACCGCTCCAGCTCAGGTCGAGCCGGGTaGGGAGTGGAAGGCGGGCCA +
Preference number: 2 (lower is better)
Translates to: PSNISTVSEGSGPRYRSSSGRAG*GVEGGP
Trigger: TGGCCCGCCTTCCACTCCTCACCCGGCTCGACCTGA...GCTGGAGCGGTACCGGGGCCCCGAGCCCTCTGACACGGTGGAGATGTTCGAGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
3UTR-3UTR TCA 90 bp CCGCTGCAGAGCGATGAGGTTCACACGGTGCAGCCGCAGCCGCTCCCAGGCCTTGCCGATAGCGGATGGTaGTGGGGGTGGCGGTGGCTC +
Preference number: 2 (lower is better)
Translates to: PLQSDEVHTVQPQPLPGLADSGW*WGWRWL
Trigger: GAGCCACCGCCACCCCCATCACCATCCGCTATCGGC...AAGGCCTGGGAGCGGCTGCGGCTGCACCGTGTGAACCTCATCGCTCTGCAGCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
3UTR-3UTR TCA 90 bp AGGGCCTGCAGCTCTCGGCCAGCCATGCGCACCACCTGCATGGAGACTCGACGAGGGCCTGCGGTGGGGTaGAGAGCAGCCACAGCCCCA +
Preference number: 2 (lower is better)
Translates to: RACSSRPAMRTTCMETRRGPAVG*RAATAP
Trigger: TGGGGCTGTGGCTGCTCTTCACCCCACCGCAGGCCC...TCGTCGAGTCTCCATGCAGGTGGTGCGCATGGCTGGCCGAGAGCTGCAGGCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
3UTR-3UTR GCA 90 bp TTGGCACCAGCCCAGCCCACGGCGCTGGGACACTCCTGCTGCCGCCTCCCAGAGGCTGGGGGCAGCGTCTaGAGGCGGTTGTGTGTCACT +
Preference number: 2 (lower is better)
Translates to: LAPAQPTALGHSCCRLPEAGGSV*RRLCVT
Trigger: AGTGACACACAACCGCCTGCAGACGCTGCCCCCAGC...CTCTGGGAGGCGGCAGCAGGAGTGTCCCAGCGCCGTGGGCTGGGCTGGTGCCAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524486.5
3UTR-3UTR GCA 90 bp CCGCAGCCGCTCCCAGGCCTTCCGAGCCAGGCCTCCCACACAGTTCTTGGTGGTGAGGCTGGGAGGCTCTaGAGCCGGTTGGAGGCCAGG +
Preference number: 2 (lower is better)
Translates to: PQPLPGLPSQASHTVLGGEAGRL*SRLEAR
Trigger: CCTGGCCTCCAACCGGCTGCAGAGCCTCCCAGCCTC...ACCACCAAGAACTGTGTGGGAGGCCTGGCTCGGAAGGCCTGGGAGCGGCTGCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
3UTR-3UTR GCA 90 bp CACAGCAGTGTCCCCTCCGGTGGCACCAGGCAGGCATTGGACACAGGGCGGGAAGCTCCCGCTGGGAACTaGAGGCGGACGCCACAGGCC +
Preference number: 2 (lower is better)
Translates to: HSSVPSGGTRQALDTGREAPAGN*RRTPQA
Trigger: GGCCTGTGGCGTCCGCCTGCAGTTCCCAGCGGGAGC...TTCCCGCCCTGTGTCCAATGCCTGCCTGGTGCCACCGGAGGGGACACTGCTGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
3UTR-3UTR CCA 90 bp AGCCGCTCCCAGGCCTTCCGAGCCAGGCCTCCCACACAGTTCTTGGTGGTGTACCCCAGCCCACGGCGCTaGGACACTCCTGCTGCCGCC +
Preference number: 2 (lower is better)
Translates to: SRSQAFRARPPTQFLVVYPSPRR*DTPAAA
Trigger: GGCGGCAGCAGGAGTGTCCCAGCGCCGTGGGCTGGG...GTACACCACCAAGAACTGTGTGGGAGGCCTGGCTCGGAAGGCCTGGGAGCGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524486.5
3UTR CAA 90 bp GGGTCCTTGGGGGCCAAGCCCATGCGTCGGATGCTGTCCTGGTACTaGCGGCGGCCGAGCTCCAAGACTGCGCGCACCTCTTCAGCCACG +
Preference number: 2 (lower is better)
Translates to: GSLGAKPMRRMLSWY*RRPSSKTARTSSAT
Trigger: CGTGGCTGAAGAGGTGCGCGCAGTCTTGGAGCTCGGCCGCCGCAAGTACCAGGACAGCATCCGACGCATGGGCTTGGCCCCCAAGGACCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
3UTR-3UTR TCA 90 bp GAGGTTCACACGGTGCAGCCGCAGCCGCTCCCAGGCCTTCCGAGCCAGGCCTCCGTGTCTCCAGGCTGTTaGAGCTCAGGTCCAGGTGGG +
Preference number: 2 (lower is better)
Translates to: EVHTVQPQPLPGLPSQASVSPGC*SSGPGG
Trigger: CCCACCTGGACCTGAGCTTCAACAGCCTGGAGACAC...GGAGGCCTGGCTCGGAAGGCCTGGGAGCGGCTGCGGCTGCACCGTGTGAACCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
3UTR-3UTR GCA 90 bp GCAGTGTCCCCTCCGGTGGCACCAGGCAGGCATTGGACACAGGGCGGGAAACCAGCGCTGGGACACTCCTaGTGCCGCCTCCCAGAGCAG +
Preference number: 2 (lower is better)
Translates to: AVSPPVAPGRHWTQGGKPALGHS*CRLPEQ
Trigger: CTGCTCTGGGAGGCGGCAGCAGGAGTGTCCCAGCGC...TGGTTTCCCGCCCTGTGTCCAATGCCTGCCTGGTGCCACCGGAGGGGACACTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524486.5
3UTR-3UTR CCA 90 bp TTGGCACCAGCCCAGCCCACGGCGCTGGGACACTCCTGCTGCCGCCTCCCAGAGCCCGTCCCCACACACTaGAGAGACTTGAAGGTGGGG +
Preference number: 2 (lower is better)
Translates to: LAPAQPTALGHSCCRLPEPVPTH*RDLKVG
Trigger: CCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGG...CTCTGGGAGGCGGCAGCAGGAGTGTCCCAGCGCCGTGGGCTGGGCTGGTGCCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524486.5
3UTR-3UTR CCA 90 bp GGGCCAAGCCCATGCGTCGGATGCTGTCCTGGTACTTGCGGCGGCCGAGCTCCAGCAGCCGCCGAAGGGTaGCGTCCACCTTGTTTCGGG +
Preference number: 2 (lower is better)
Translates to: GPSPCVGCCPGTCGGRAPAAAEG*RPPCFG
Trigger: CCCGAAACAAGGTGGACGCCACCCTTCGGCGGCTGC...TGGAGCTCGGCCGCCGCAAGTACCAGGACAGCATCCGACGCATGGGCTTGGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
3UTR-3UTR GCA 90 bp CACAGCAGTGTCCCCTCCGGTGGCACCAGGCAGGCATTGGACACAGGGCGGGAACCCGCTGCGGGCAGTTaGTGGCTTAGGCTTGGCACC +
Preference number: 2 (lower is better)
Translates to: HSSVPSGGTRQALDTGREPAAGS*WLRLGT
Trigger: GGTGCCAAGCCTAAGCCAGCAACTGCCCGCAGCGGG...TTCCCGCCCTGTGTCCAATGCCTGCCTGGTGCCACCGGAGGGGACACTGCTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524486.5
3UTR-3UTR GCA 90 bp GGGCCAAGCCCATGCGTCGGATGCTGTCCTGGTACTTGCGGCGGCCGAGCTCCACAGCAGGGGGCTCACTaGAGCCTCTGGTTCTCCCAG +
Preference number: 2 (lower is better)
Translates to: GPSPCVGCCPGTCGGRAPQQGAH*SLWFSQ
Trigger: CTGGGAGAACCAGAGGCTGCAGTGAGCCCCCTGCTG...TGGAGCTCGGCCGCCGCAAGTACCAGGACAGCATCCGACGCATGGGCTTGGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
3UTR-3UTR CCA 90 bp ACCCGAGGAGCACAGCAGTGTCCCCTCCGGTGGCACCAGGCAGGCATTGGACACGAGCCGGGTGAGGAGTaGAAGGCGGGCCAAGTCAGC +
Preference number: 2 (lower is better)
Translates to: TRGAQQCPLRWHQAGIGHEPGEE*KAGQVS
Trigger: GCTGACTTGGCCCGCCTTCCACTCCTCACCCGGCTC...GTGTCCAATGCCTGCCTGGTGCCACCGGAGGGGACACTGCTGTGCTCCTCGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
3UTR CAA 90 bp CCCGAGGAGCACAGCAGTGTCCCCTCCGGTGGCACCAGGCAGGCATaGGACACAGGGCGGGAAACCACAAGGAACCAGGAGAAGTGGGGC +
Preference number: 2 (lower is better)
Translates to: PEEHSSVPSGGTRQA*DTGRETTRNQEKWG
Trigger: GCCCCACTTCTCCTGGTTCCTTGTGGTTTCCCGCCCTGTGTCCAATGCCTGCCTGGTGCCACCGGAGGGGACACTGCTGTGCTCCTCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
3UTR-3UTR TCA 90 bp TGGGGGCCAAGCCCATGCGTCGGATGCTGTCCTGGTACTTGCGGCGGCCGAGCTCACACTGGAGAGACTTaGAGGTGGGGGCTCTGCCCA +
Preference number: 2 (lower is better)
Translates to: WGPSPCVGCCPGTCGGRAHTGET*RWGLCP
Trigger: TGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTG...AGCTCGGCCGCCGCAAGTACCAGGACAGCATCCGACGCATGGGCTTGGCCCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
3UTR-3UTR TCA 90 bp CATCCAGATCATCCCGGAACTCGTGCCGGATGCGCTGCACCTCCCGGTAGGACAGAGGGCTGCCACTGGTaGACTCGGGGCGTCTGGCGA +
Preference number: 2 (lower is better)
Translates to: HPDHPGTRAGCAAPPGRTEGCHW*TRGVWR
Trigger: TCGCCAGACGCCCCGAGTTCACCAGTGGCAGCCCTC...TGTCCTACCGGGAGGTGCAGCGCATCCGGCACGAGTTCCGGGATGATCTGGATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
3UTR-3UTR GCA 90 bp AGGGCCTGCAGCTCTCGGCCAGCCATGCGCACCACCTGCATGGAGACTCGACGACCCAGACCTCGCATCTaGAGGACACAGGCCGGCAGT +
Preference number: 2 (lower is better)
Translates to: RACSSRPAMRTTCMETRRPRPRI*RTQAGS
Trigger: ACTGCCGGCCTGTGTCCTGCAGATGCGAGGTCTGGG...TCGTCGAGTCTCCATGCAGGTGGTGCGCATGGCTGGCCGAGAGCTGCAGGCCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
3UTR-3UTR CCA 90 bp GGCAGAGCGGGGTCCTTGGGGGCCAAGCCCATGCGTCGGATGCTGTCCTGGTACGCTCTGCCCATCCACTaGGGAATATCTGGGCCAGCC +
Preference number: 2 (lower is better)
Translates to: GRAGSLGAKPMRRMLSWYALPIH*GISGPA
Trigger: GGCTGGCCCAGATATTCCCCAGTGGATGGGCAGAGC...GTACCAGGACAGCATCCGACGCATGGGCTTGGCCCCCAAGGACCCCGCTCTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
3UTR-3UTR TCA 90 bp CTGGCCCCGCACAGCCTGAGCCTCCCGGTCCAGAGTGGTGGTCACGTATACCTCCACACTGGAGAGACTTaGAGGTGGGGGCTCTGCCCA +
Preference number: 2 (lower is better)
Translates to: LAPHSLSLPVQSGGHVYLHTGET*RWGLCP
Trigger: TGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTG...GAGGTATACGTGACCACCACTCTGGACCGGGAGGCTCAGGCTGTGCGGGGCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
3UTR-3UTR TCA 90 bp AGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGGCCAGCCTCAGGTCGAGCCGGGTaGGGAGTGGAAGGCGGGCCA +
Preference number: 2 (lower is better)
Translates to: RDLKVGALPIHWGISGPASGRAG*GVEGGP
Trigger: TGGCCCGCCTTCCACTCCTCACCCGGCTCGACCTGA...GGCTGGCCCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
3UTR-3UTR GCA 90 bp CCCTCGAACATCTCCACCGTGTCAGAGGGCTCGGGGCCCCGGTACCGCTCCAGCACAGTGCAGTTTTGTTaGTCACAGGGACCCGTCCCC +
Preference number: 2 (lower is better)
Translates to: PSNISTVSEGSGPRYRSSTVQFC*SQGPVP
Trigger: GGGGACGGGTCCCTGTGAGCAACAAAACTGCACTGT...GCTGGAGCGGTACCGGGGCCCCGAGCCCTCTGACACGGTGGAGATGTTCGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
3UTR-3UTR CCA 90 bp GATGCTGTCCTGGTACTTGCGGCGGCCGAGCTCCAAGACTGCGCGCACCTCTTCGCTGCGGGCAGTTGCTaGCTTAGGCTTGGCACCAGC +
Preference number: 2 (lower is better)
Translates to: DAVLVLAAAELQDCAHLFAAGSC*LRLGTS
Trigger: GCTGGTGCCAAGCCTAAGCCAGCAACTGCCCGCAGC...GAAGAGGTGCGCGCAGTCTTGGAGCTCGGCCGCCGCAAGTACCAGGACAGCATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524486.5
3UTR CAA 90 bp AGACCTCGCATCTGCAGGACACAGGCCGGCAGTGTCTCCAGGCTGTaGAAGCTCAGGTCCAGGTGGGCCAGATGGGCCAGGCCACTCAGA +
Preference number: 2 (lower is better)
Translates to: RPRICRTQAGSVSRL*KLRSRWARWARPLR
Trigger: TCTGAGTGGCCTGGCCCATCTGGCCCACCTGGACCTGAGCTTCAACAGCCTGGAGACACTGCCGGCCTGTGTCCTGCAGATGCGAGGTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
3UTR CAA 90 bp CGCAGCCGCTCCCAGGCCTTCCGAGCCAGGCCTCCCACACAGTTCTaGGTGGTGTACCAGAGCCAGTACCAGGAGAAGTGTGTGACCTGG +
Preference number: 2 (lower is better)
Translates to: RSRSQAFRARPPTQF*VVYQSQYQEKCVTW
Trigger: CCAGGTCACACACTTCTCCTGGTACTGGCTCTGGTACACCACCAAGAACTGTGTGGGAGGCCTGGCTCGGAAGGCCTGGGAGCGGCTGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524486.5
3UTR-3UTR GCA 90 bp GATGCTGTCCTGGTACTTGCGGCGGCCGAGCTCCAAGACTGCGCGCACCTCTTCGCCAGGAGGTTGCTGTaGAGGACAAGGAGCCGCAAG +
Preference number: 2 (lower is better)
Translates to: DAVLVLAAAELQDCAHLFARRLL*RTRSRK
Trigger: CTTGCGGCTCCTTGTCCTGCACAGCAACCTCCTGGC...GAAGAGGTGCGCGCAGTCTTGGAGCTCGGCCGCCGCAAGTACCAGGACAGCATC
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
3UTR-3UTR CCA 90 bp GCGGCGGCCGAGCTCCAAGACTGCGCGCACCTCTTCAGCCACGTCCTGCCGGTCCCACTGGGGAATATCTaGGCCAGCCTAAAAGTCTGT +
Preference number: 2 (lower is better)
Translates to: AAAELQDCAHLFSHVLPVPLGNI*ASLKVC
Trigger: ACAGACTTTTAGGCTGGCCCAGATATTCCCCAGTGG...GACCGGCAGGACGTGGCTGAAGAGGTGCGCGCAGTCTTGGAGCTCGGCCGCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
3UTR-3UTR CCA 90 bp AGCAGTGTCCCCTCCGGTGGCACCAGGCAGGCATTGGACACAGGGCGGGAAACCACCAAGAGGCAGCTGTaGACCAAGCCTGTGGGTGCA +
Preference number: 2 (lower is better)
Translates to: SSVPSGGTRQALDTGRETTKRQL*TKPVGA
Trigger: TGCACCCACAGGCTTGGTCCACAGCTGCCTCTTGGT...GGTTTCCCGCCCTGTGTCCAATGCCTGCCTGGTGCCACCGGAGGGGACACTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524486.5
3UTR-3UTR CCA 90 bp AGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGGCCAGCCGGCAGGTCCCGGAGCTaGTTGTCCCTCAGGTCGAGC +
Preference number: 2 (lower is better)
Translates to: RDLKVGALPIHWGISGPAGRSRS*LSLRSS
Trigger: GCTCGACCTGAGGGACAACCAGCTCCGGGACCTGCC...GGCTGGCCCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
3UTR-3UTR CCA 90 bp GGCAGAGCGGGGTCCTTGGGGGCCAAGCCCATGCGTCGGATGCTGTCCTGGTACCAGTCTGGGCATTTCTaGAATGAGGGCTGCCACTGG +
Preference number: 2 (lower is better)
Translates to: GRAGSLGAKPMRRMLSWYQSGHF*NEGCHW
Trigger: CCAGTGGCAGCCCTCATTCCAGAAATGCCCAGACTG...GTACCAGGACAGCATCCGACGCATGGGCTTGGCCCCCAAGGACCCCGCTCTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
3UTR-3UTR TCA 90 bp GTCATTCCGGGTCCTGACCACCACTTCACGGCAGCGCCGGGCCTGCGGTGGGGTAAAGCTGTCCAAATCTaGGGTCAGGAACAGTCTGGG +
Preference number: 2 (lower is better)
Translates to: VIPGPDHHFTAAPGLRWGKAVQI*GQEQSG
Trigger: CCCAGACTGTTCCTGACCTCAGATTTGGACAGCTTT...ACCCCACCGCAGGCCCGGCGCTGCCGTGAAGTGGTGGTCAGGACCCGGAATGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
3UTR-3UTR TCA 90 bp TGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGGCCAGAGGCAGCTGCACGGTaGCCGGTTGGAGGAAGCTGG +
Preference number: 2 (lower is better)
Translates to: WRDLKVGALPIHWGISGPEAAAR*PVGGSW
Trigger: CCAGCTTCCTCCAACCGGTCACCGTGCAGCTGCCTC...TGGCCCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
3UTR-3UTR GCA 90 bp CGGATGCTGTCCTGGTACTTGCGGCGGCCGAGCTCCAAGACTGCGCGCACCTCTACAGTGCAGTTTTGTTaGTCACAGGGACCCGTCCCC +
Preference number: 2 (lower is better)
Translates to: RMLSWYLRRPSSKTARTSTVQFC*SQGPVP
Trigger: GGGGACGGGTCCCTGTGAGCAACAAAACTGCACTGT...AGAGGTGCGCGCAGTCTTGGAGCTCGGCCGCCGCAAGTACCAGGACAGCATCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
3UTR-3UTR GCA 90 bp ATGCTGTCCTGGTACTTGCGGCGGCCGAGCTCCAAGACTGCGCGCACCTCTTCACAGAGGCCAGGAGGTTaGTGTGCAGGACAAGGAGCC +
Preference number: 2 (lower is better)
Translates to: MLSWYLRRPSSKTARTSSQRPGG*CAGQGA
Trigger: GGCTCCTTGTCCTGCACAGCAACCTCCTGGCCTCTG...TGAAGAGGTGCGCGCAGTCTTGGAGCTCGGCCGCCGCAAGTACCAGGACAGCAT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
3UTR-3UTR CCA 90 bp ATGCTGTCCTGGTACTTGCGGCGGCCGAGCTCCAAGACTGCGCGCACCTCTTCACCCGTCCCCACACACTaGAGAGACTTGAAGGTGGGG +
Preference number: 2 (lower is better)
Translates to: MLSWYLRRPSSKTARTSSPVPTH*RDLKVG
Trigger: CCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGG...TGAAGAGGTGCGCGCAGTCTTGGAGCTCGGCCGCCGCAAGTACCAGGACAGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
3UTR-3UTR CCA 90 bp CTCAGCAGGTTGCTCTGCGTCAGAAAGCCGGTCTCGGCATCTCCCAGATTCAAGCGAGGCGCTGCAGGGTaGATAGGGCCCCCAGTGCTG +
Preference number: 2 (lower is better)
Translates to: LSRLLCVRKPVSASPRFKRGAAG*IGPPVL
Trigger: CAGCACTGGGGGCCCTATCCACCCTGCAGCGCCTCG...CTTGAATCTGGGAGATGCCGAGACCGGCTTTCTGACGCAGAGCAACCTGCTGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
3UTR-3UTR CCA 90 bp CTGCTCATCCAGATCATCCCGGAACTCGTGCCGGATGCGCTGCACCTCCCGGTATGCGCACCACCTGCATaGAGACTCGACGAGGCTCCT +
Preference number: 2 (lower is better)
Translates to: LLIQIIPELVPDALHLPVCAPPA*RLDEAP
Trigger: AGGAGCCTCGTCGAGTCTCCATGCAGGTGGTGCGCA...TACCGGGAGGTGCAGCGCATCCGGCACGAGTTCCGGGATGATCTGGATGAGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
3UTR-3UTR TCA 90 bp GACGCCCAGCCACACTCAGCAGGTTGCTCTGCGTCAGAAAGCCGGTCTCGGCATGTCACTGAGCAGCCTTaGGGGGTCACAGGAAAGCTG +
Preference number: 2 (lower is better)
Translates to: DAQPHSAGCSASESRSRHVTEQP*GVTGKL
Trigger: CAGCTTTCCTGTGACCCCTCAAGGCTGCTCAGTGAC...ATGCCGAGACCGGCTTTCTGACGCAGAGCAACCTGCTGAGTGTGGCTGGGCGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
3UTR-3UTR GCA 90 bp TGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGGCCAGCCATGCGCACCACCTaGATGGAGACTCGACGAGGC +
Preference number: 2 (lower is better)
Translates to: WRDLKVGALPIHWGISGPAMRTT*METRRG
Trigger: GCCTCGTCGAGTCTCCATGCAGGTGGTGCGCATGGC...TGGCCCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
3UTR-3UTR GCA 90 bp GCTCGAAGGCCGCAAAGAACTCTTCGCCCTCGAACATCTCCACCGTGTCAGAGGATGAGGTTCACACGGTaGAGCCGCAGCCGCTCCCAG +
Preference number: 2 (lower is better)
Translates to: ARRPQRTLRPRTSPPCQRMRFTR*SRSRSQ
Trigger: CTGGGAGCGGCTGCGGCTGCACCGTGTGAACCTCAT...CCTCTGACACGGTGGAGATGTTCGAGGGCGAAGAGTTCTTTGCGGCCTTCGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
3UTR-3UTR TCA 90 bp AGCAGTGTCCCCTCCGGTGGCACCAGGCAGGCATTGGACACAGGGCGGGAAACCAAAGCTGTCCAAATCTaGGGTCAGGAACAGTCTGGG +
Preference number: 2 (lower is better)
Translates to: SSVPSGGTRQALDTGRETKAVQI*GQEQSG
Trigger: CCCAGACTGTTCCTGACCTCAGATTTGGACAGCTTT...GGTTTCCCGCCCTGTGTCCAATGCCTGCCTGGTGCCACCGGAGGGGACACTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
3UTR-3UTR GCA 90 bp CTCAGCAGGTTGCTCTGCGTCAGAAAGCCGGTCTCGGCATCTCCCAGATTCAAGCCAGAGCCGCTGGGGTaGCTCTTCCTCCAGGTAGGT +
Preference number: 2 (lower is better)
Translates to: LSRLLCVRKPVSASPRFKPEPLG*LFLQVG
Trigger: ACCTACCTGGAGGAAGAGGCACCCCAGCGGCTCTGG...CTTGAATCTGGGAGATGCCGAGACCGGCTTTCTGACGCAGAGCAACCTGCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
3UTR-3UTR CCA 90 bp GCCAAGCCCATGCGTCGGATGCTGTCCTGGTACTTGCGGCGGCCGAGCTCCAAGCCACTGGGGAATATCTaGGCCAGCCTAAAAGTCTGT +
Preference number: 2 (lower is better)
Translates to: AKPMRRMLSWYLRRPSSKPLGNI*ASLKVC
Trigger: ACAGACTTTTAGGCTGGCCCAGATATTCCCCAGTGG...CTTGGAGCTCGGCCGCCGCAAGTACCAGGACAGCATCCGACGCATGGGCTTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
3UTR-3UTR CCA 90 bp GACGCCCAGCCACACTCAGCAGGTTGCTCTGCGTCAGAAAGCCGGTCTCGGCATCAGTCTGGGCATTTCTaGAATGAGGGCTGCCACTGG +
Preference number: 2 (lower is better)
Translates to: DAQPHSAGCSASESRSRHQSGHF*NEGCHW
Trigger: CCAGTGGCAGCCCTCATTCCAGAAATGCCCAGACTG...ATGCCGAGACCGGCTTTCTGACGCAGAGCAACCTGCTGAGTGTGGCTGGGCGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
3UTR-3UTR CCA 90 bp CTGGCCCCGCACAGCCTGAGCCTCCCGGTCCAGAGTGGTGGTCACGTATACCTCCCACACAGTTCTTGGTaGTGTACCAGAGCCAGTACA +
Preference number: 2 (lower is better)
Translates to: LAPHSLSLPVQSGGHVYLPHSSW*CTRAST
Trigger: TGTACTGGCTCTGGTACACCACCAAGAACTGTGTGG...GAGGTATACGTGACCACCACTCTGGACCGGGAGGCTCAGGCTGTGCGGGGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525028.6
3UTR-3UTR TCA 90 bp GCAGGTTGCTCTGCGTCAGAAAGCCGGTCTCGGCATCTCCCAGATTCAAGGGTGGTGTCCAGCAGATTCTaGGAGAGATCGAGGCGCTGC +
Preference number: 2 (lower is better)
Translates to: AGCSASESRSRHLPDSRVVSSRF*ERSRRC
Trigger: GCAGCGCCTCGATCTCTCTCAGAATCTGCTGGACAC...CACCCTTGAATCTGGGAGATGCCGAGACCGGCTTTCTGACGCAGAGCAACCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
3UTR-3UTR TCA 90 bp CTCAGCAGGTTGCTCTGCGTCAGAAAGCCGGTCTCGGCATCTCCCAGATTCAAGGGACCACCTGAGCTGTaGTGTCATCCCAGGTGGCTG +
Preference number: 2 (lower is better)
Translates to: LSRLLCVRKPVSASPRFKGPPEL*CHPRWL
Trigger: CAGCCACCTGGGATGACATCACAGCTCAGGTGGTCC...CTTGAATCTGGGAGATGCCGAGACCGGCTTTCTGACGCAGAGCAACCTGCTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
3UTR-3UTR CCA 90 bp TCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCCCACTGGGGAATATCTaGGCCAGCCTAAAAGTCTGT +
Preference number: 2 (lower is better)
Translates to: SQGPVPTHWRDLKVGALPPLGNI*ASLKVC
Trigger: ACAGACTTTTAGGCTGGCCCAGATATTCCCCAGTGG...GGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
3UTR-3UTR TCA 90 bp CTCAGCCCAGGAGAAGAGCATGTGACGGATCTGCTCATCCAGATCATCCCGGAACACACTGGAGAGACTTaGAGGTGGGGGCTCTGCCCA +
Preference number: 2 (lower is better)
Translates to: LSPGEEHVTDLLIQIIPEHTGET*RWGLCP
Trigger: TGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTG...TTCCGGGATGATCTGGATGAGCAGATCCGTCACATGCTCTTCTCCTGGGCTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
3UTR-3UTR GCA 90 bp GCTCGAAGGCCGCAAAGAACTCTTCGCCCTCGAACATCTCCACCGTGTCAGAGGACAGTGCAGTTTTGTTaGTCACAGGGACCCGTCCCC +
Preference number: 2 (lower is better)
Translates to: ARRPQRTLRPRTSPPCQRTVQFC*SQGPVP
Trigger: GGGGACGGGTCCCTGTGAGCAACAAAACTGCACTGT...CCTCTGACACGGTGGAGATGTTCGAGGGCGAAGAGTTCTTTGCGGCCTTCGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
3UTR-3UTR GCA 90 bp TGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGGCCAAGACAAAGCAGATTCTaGCCTCCACACAGTCAGGGC +
Preference number: 2 (lower is better)
Translates to: WRDLKVGALPIHWGISGPRQSRF*PPHSQG
Trigger: GCCCTGACTGTGTGGAGGGCAGAATCTGCTTTGTCT...TGGCCCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
3UTR-3UTR CCA 90 bp GCTCGAAGGCCGCAAAGAACTCTTCGCCCTCGAACATCTCCACCGTGTCAGAGGCTCCCACACAGTTCTTaGTGGTGTACCAGAGCCAGT +
Preference number: 2 (lower is better)
Translates to: ARRPQRTLRPRTSPPCQRLPHSS*WCTRAS
Trigger: ACTGGCTCTGGTACACCACCAAGAACTGTGTGGGAG...CCTCTGACACGGTGGAGATGTTCGAGGGCGAAGAGTTCTTTGCGGCCTTCGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
3UTR-3UTR CCA 90 bp CCTTCACATTCTTCAGGTGCGAGTAGAAGACAAAGCAGATTCTGCCCTCCACACGCAGCCGCCGAAGGGTaGCGTCCACCTTGTTTCGGG +
Preference number: 2 (lower is better)
Translates to: PSHSSGASRRQSRFCPPHAAAEG*RPPCFG
Trigger: CCCGAAACAAGGTGGACGCCACCCTTCGGCGGCTGC...GTGTGGAGGGCAGAATCTGCTTTGTCTTCTACTCGCACCTGAAGAATGTGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
3UTR-3UTR CCA 90 bp CACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGGCCACTGGGGAATATCTaGGCCAGCCTAAAAGTCTGT +
Preference number: 2 (lower is better)
Translates to: HWRDLKVGALPIHWGISGPLGNI*ASLKVC
Trigger: ACAGACTTTTAGGCTGGCCCAGATATTCCCCAGTGG...CCCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
3UTR-3UTR GCA 90 bp CCTTCACATTCTTCAGGTGCGAGTAGAAGACAAAGCAGATTCTGCCCTCCACACGTCATCCCAGGTGGCTaGAGGAGGGGCCCAGTACAA +
Preference number: 2 (lower is better)
Translates to: PSHSSGASRRQSRFCPPHVIPGG*RRGPVQ
Trigger: TTGTACTGGGCCCCTCCTGCAGCCACCTGGGATGAC...GTGTGGAGGGCAGAATCTGCTTTGTCTTCTACTCGCACCTGAAGAATGTGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
3UTR-3UTR CAA 90 bp TGGGGGTGGCGGTGGCTCCCGCTGGGAACTGCAGGCGGACGCCACAGGCCAGGGGTTGCTGGCTTAGGCTaGGCACCAGCCCAGCCCACG +
Preference number: 3 (lower is better)
Translates to: WGWRWLPLGTAGGRHRPGVAGLG*APAQPT
Trigger: CGTGGGCTGGGCTGGTGCCAAGCCTAAGCCAGCAAC...CCCTGGCCTGTGGCGTCCGCCTGCAGTTCCCAGCGGGAGCCACCGCCACCCCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524486.5
3UTR GCA 72 bp TCCCGGCGCCGCTGCAGAGCGATGAGGTTCACACGGTaGAGCCGCAGCCGCTCCCAGGCCTTCCGAGCCAGG +
Preference number: 3 (lower is better)
Translates to: SRRRCRAMRFTR*SRSRSQAFRAR
Trigger: CCTGGCTCGGAAGGCCTGGGAGCGGCTGCGGCTGCACCGTGTGAACCTCATCGCTCTGCAGCGGCGCCGGGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
3UTR GCA 72 bp CGAAGGGTGGCGTCCACCTTGTTTCGGGGCAGGCACTaGAGCAGGACCTGCTCAGGGTCCCGGCGCCGCTGC +
Preference number: 3 (lower is better)
Translates to: RRVASTLFRGRH*SRTCSGSRRRC
Trigger: GCAGCGGCGCCGGGACCCTGAGCAGGTCCTGCTGCAGTGCCTGCCCCGAAACAAGGTGGACGCCACCCTTCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
3UTR-3UTR CAA 90 bp GAACTCGTGCCGGATGCGCTGCACCTCCCGGTAGGACACCCCCAGGTGCAGGGCAGGCTCTGCAGCCGGTaGGAGGCCAGGTTGAGCTCC +
Preference number: 3 (lower is better)
Translates to: ELVPDALHLPVGHPQVQGRLCSR*EARLSS
Trigger: GGAGCTCAACCTGGCCTCCAACCGGCTGCAGAGCCT...GCCCTGCACCTGGGGGTGTCCTACCGGGAGGTGCAGCGCATCCGGCACGAGTTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
3UTR GCA 72 bp AGGAGCCGCAAGGACCGAAGTCCCGCTGCGGGCAGTTaGTGGCTTAGGCTTGGCACCAGCCCAGCCCACGGC +
Preference number: 3 (lower is better)
Translates to: RSRKDRSPAAGS*WLRLGTSPAHG
Trigger: GCCGTGGGCTGGGCTGGTGCCAAGCCTAAGCCAGCAACTGCCCGCAGCGGGACTTCGGTCCTTGCGGCTCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524486.5
3UTR GCA 72 bp CACTGCAGCAGGACCTGCTCAGGGTCCCGGCGCCGCTaGAGAGCGATGAGGTTCACACGGTGCAGCCGCAGC +
Preference number: 3 (lower is better)
Translates to: HCSRTCSGSRRR*RAMRFTRCSRS
Trigger: GCTGCGGCTGCACCGTGTGAACCTCATCGCTCTGCAGCGGCGCCGGGACCCTGAGCAGGTCCTGCTGCAGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
3UTR CCA 72 bp AGCCGCAAGGACCGAAGTCCCGCTGCGGGCAGTTGCTaGCTTAGGCTTGGCACCAGCCCAGCCCACGGCGCT +
Preference number: 3 (lower is better)
Translates to: SRKDRSPAAGSC*LRLGTSPAHGA
Trigger: AGCGCCGTGGGCTGGGCTGGTGCCAAGCCTAAGCCAGCAACTGCCCGCAGCGGGACTTCGGTCCTTGCGGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524486.5
3UTR CCA 72 bp CCTGACCACCACTTCACGGCAGCGCCGGGCCTGCGGTaGGGTGAAGAGCAGCCACAGCCCCACATCCTGCTG +
Preference number: 3 (lower is better)
Translates to: PDHHFTAAPGLR*GEEQPQPHILL
Trigger: CAGCAGGATGTGGGGCTGTGGCTGCTCTTCACCCCACCGCAGGCCCGGCGCTGCCGTGAAGTGGTGGTCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
3UTR TCA 72 bp GGTCCCGGAGCTGGTTGTCCCTCAGGTCGAGCCGGGTaGGGAGTGGAAGGCGGGCCAAGTCAGCTGGCACAG +
Preference number: 3 (lower is better)
Translates to: GPGAGCPSGRAG*GVEGGPSQLAQ
Trigger: CTGTGCCAGCTGACTTGGCCCGCCTTCCACTCCTCACCCGGCTCGACCTGAGGGACAACCAGCTCCGGGACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
3UTR GCA 72 bp CGCAGGGGCTACTCACCCAGAGAGGCTGGGAGGCTCTaGAGCCGGTTGGAGGCCAGGTTGAGCTCCAGGAGG +
Preference number: 3 (lower is better)
Translates to: RRGYSPREAGRL*SRLEARLSSRR
Trigger: CCTCCTGGAGCTCAACCTGGCCTCCAACCGGCTGCAGAGCCTCCCAGCCTCTCTGGGTGAGTAGCCCCTGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524486.5
3UTR GCA 72 bp GCACCAGCCCAGCCCACGGCGCTGGGACACTCCTGCTaGCGCCTCCCAGAGCAGCTGTTTCAGACTCTCCTC +
Preference number: 3 (lower is better)
Translates to: APAQPTALGHSC*RLPEQLFQTLL
Trigger: GAGGAGAGTCTGAAACAGCTGCTCTGGGAGGCGGCAGCAGGAGTGTCCCAGCGCCGTGGGCTGGGCTGGTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524486.5
3UTR GCA 72 bp TCCACCTTGTTTCGGGGCAGGCACTGCAGCAGGACCTaGTCAGGGTCCCGGCGCCGCTGCAGAGCGATGAGG +
Preference number: 3 (lower is better)
Translates to: STLFRGRHCSRT*SGSRRRCRAMR
Trigger: CCTCATCGCTCTGCAGCGGCGCCGGGACCCTGAGCAGGTCCTGCTGCAGTGCCTGCCCCGAAACAAGGTGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
3UTR GCA 72 bp GAGCGGGGTCCTTGGGGGCCAAGCCCATGCGTCGGATaGTGTCCTGGTACTTGCGGCGGCCGAGCTCCAAGA +
Preference number: 3 (lower is better)
Translates to: ERGPWGPSPCVG*CPGTCGGRAPR
Trigger: TCTTGGAGCTCGGCCGCCGCAAGTACCAGGACAGCATCCGACGCATGGGCTTGGCCCCCAAGGACCCCGCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
3UTR CCA 72 bp TCCTTGGGGGCCAAGCCCATGCGTCGGATGCTGTCCTaGTACTTGCGGCGGCCGAGCTCCAAGACTGCGCGC +
Preference number: 3 (lower is better)
Translates to: SLGAKPMRRMLS*YLRRPSSKTAR
Trigger: GCGCGCAGTCTTGGAGCTCGGCCGCCGCAAGTACCAGGACAGCATCCGACGCATGGGCTTGGCCCCCAAGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
3UTR TCA 72 bp TCTCCAGGTCACCCCAGCTGTTGTCATTCCGGGTCCTaGCCACCACTTCACGGCAGCGCCGGGCCTGCGGTG +
Preference number: 3 (lower is better)
Translates to: SPGHPSCCHSGS*PPLHGSAGPAV
Trigger: CACCGCAGGCCCGGCGCTGCCGTGAAGTGGTGGTCAGGACCCGGAATGACAACAGCTGGGGTGACCTGGAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
3UTR GCA 72 bp TCCCAGGTGGCTGCAGGAGGGGCCCAGTACAACAGGTaGAGGCGGGAGCGGTCCAGACTGAGGCCTGTGATG +
Preference number: 3 (lower is better)
Translates to: SQVAAGGAQYNR*RRERSRLRPVM
Trigger: CATCACAGGCCTCAGTCTGGACCGCTCCCGCCTGCACCTGTTGTACTGGGCCCCTCCTGCAGCCACCTGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
3UTR GCA 72 bp AGCTCCAAGACTGCGCGCACCTCTTCAGCCACGTCCTaGCGGTCACTCTGCTCCAGGGCCTGCACCAGGAGC +
Preference number: 3 (lower is better)
Translates to: SSKTARTSSATS*RSLCSRACTRS
Trigger: GCTCCTGGTGCAGGCCCTGGAGCAGAGTGACCGGCAGGACGTGGCTGAAGAGGTGCGCGCAGTCTTGGAGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
3UTR GCA 72 bp GCTGTCCTGGTACTTGCGGCGGCCGAGCTCCAAGACTaGGCGCACCTCTTCAGCCACGTCCTGCCGGTCACT +
Preference number: 3 (lower is better)
Translates to: AVLVLAAAELQD*AHLFSHVLPVT
Trigger: AGTGACCGGCAGGACGTGGCTGAAGAGGTGCGCGCAGTCTTGGAGCTCGGCCGCCGCAAGTACCAGGACAGC
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
3UTR GCA 72 bp GGGCCAAGCCCATGCGTCGGATGCTGTCCTGGTACTTaGGGCGGCCGAGCTCCAAGACTGCGCGCACCTCTT +
Preference number: 3 (lower is better)
Translates to: GPSPCVGCCPGT*GGRAPRLRAPL
Trigger: AAGAGGTGCGCGCAGTCTTGGAGCTCGGCCGCCGCAAGTACCAGGACAGCATCCGACGCATGGGCTTGGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
3UTR GCA 72 bp AAGGACCGAAGTCCCGCCAGAGAGGCTGGGAGGCTCTaGAGCCGGTTGGAGGCCAGGTTGAGCTCCAGGAGG +
Preference number: 3 (lower is better)
Translates to: KDRSPAREAGRL*SRLEARLSSRR
Trigger: CCTCCTGGAGCTCAACCTGGCCTCCAACCGGCTGCAGAGCCTCCCAGCCTCTCTGGCGGGACTTCGGTCCTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525028.6
3UTR CCA 72 bp GAGCTGGTTGTCCCTCAGGTCGAGCCGGGTGAGGAGTaGAAGGCGGGCCAAGTCAGCTGGCACAGAGGCCAG +
Preference number: 3 (lower is better)
Translates to: ELVVPQVEPGEE*KAGQVSWHRGQ
Trigger: CTGGCCTCTGTGCCAGCTGACTTGGCCCGCCTTCCACTCCTCACCCGGCTCGACCTGAGGGACAACCAGCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
3UTR-3UTR CAA 90 bp GCATCCACGTCGATGCCGCGCTCGAAGGCCGCAAAGAACTCTTCGCCCTCGAACAGGTCCCGGAGCTGGTaGTCCCTCAGGTCGAGCCGG +
Preference number: 3 (lower is better)
Translates to: ASTSMPRSKAAKNSSPSNRSRSW*SLRSSR
Trigger: CCGGCTCGACCTGAGGGACAACCAGCTCCGGGACCT...GTTCGAGGGCGAAGAGTTCTTTGCGGCCTTCGAGCGCGGCATCGACGTGGATGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
3UTR GCA 72 bp GGCGGGCCAAGTCAGCTGGCACAGAGGCCAGGAGGTTaGTGTGCAGGACAAGGAGCCGCAAGGACCGAAGTC +
Preference number: 3 (lower is better)
Translates to: GGPSQLAQRPGG*CAGQGAARTEV
Trigger: GACTTCGGTCCTTGCGGCTCCTTGTCCTGCACAGCAACCTCCTGGCCTCTGTGCCAGCTGACTTGGCCCGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
3UTR GCA 72 bp GCCAAGTCAGCTGGCACAGAGGCCAGGAGGTTGCTGTaGAGGACAAGGAGCCGCAAGGACCGAAGTCCCGCC +
Preference number: 3 (lower is better)
Translates to: AKSAGTEARRLL*RTRSRKDRSPA
Trigger: GGCGGGACTTCGGTCCTTGCGGCTCCTTGTCCTGCACAGCAACCTCCTGGCCTCTGTGCCAGCTGACTTGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525028.6
3UTR CCA 72 bp GAGCCGGGTGAGGAGTGGAAGGCGGGCCAAGTCAGCTaGCACAGAGGCCAGGAGGTTGCTGTGCAGGACAAG +
Preference number: 3 (lower is better)
Translates to: EPGEEWKAGQVS*HRGQEVAVQDK
Trigger: CTTGTCCTGCACAGCAACCTCCTGGCCTCTGTGCCAGCTGACTTGGCCCGCCTTCCACTCCTCACCCGGCTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
3UTR-3UTR CAA 90 bp GGGCCAAGCCCATGCGTCGGATGCTGTCCTGGTACTTGCGGCGGCCGAGCTCCACCTCCCACACAGTTCTaGGTGGTGTACCAGAGCCAG +
Preference number: 3 (lower is better)
Translates to: GPSPCVGCCPGTCGGRAPPPTQF*VVYQSQ
Trigger: CTGGCTCTGGTACACCACCAAGAACTGTGTGGGAGG...TGGAGCTCGGCCGCCGCAAGTACCAGGACAGCATCCGACGCATGGGCTTGGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
3UTR TCA 72 bp GCCCCCAGAGCCTCAGGCAGCTCAGAGAGGCAGTTGTaGGACAGCAAGAGCGCACCCAGACCTCGCATCTGC +
Preference number: 3 (lower is better)
Translates to: APRASGSSERQL*DSKSAPRPRIC
Trigger: GCAGATGCGAGGTCTGGGTGCGCTCTTGCTGTCTCACAACTGCCTCTCTGAGCTGCCTGAGGCTCTGGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
3UTR GCA 72 bp GCCAAGTCAGCTGGCACAGAGGCCAGGAGGTTGCTGTaGAGGACAAGGAGCCGCAAGGACCGAAGTCCCGCT +
Preference number: 3 (lower is better)
Translates to: AKSAGTEARRLL*RTRSRKDRSPA
Trigger: AGCGGGACTTCGGTCCTTGCGGCTCCTTGTCCTGCACAGCAACCTCCTGGCCTCTGTGCCAGCTGACTTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524486.5
3UTR GCA 72 bp CAGGACCACCTGAGCTGTGATGTCATCCCAGGTGGCTaGAGGAGGGGCCCAGTACAACAGGTGCAGGCGGGA +
Preference number: 3 (lower is better)
Translates to: QDHLSCDVIPGG*RRGPVQQVQAG
Trigger: TCCCGCCTGCACCTGTTGTACTGGGCCCCTCCTGCAGCCACCTGGGATGACATCACAGCTCAGGTGGTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
3UTR GCA 72 bp CCTCCACACAGTCAGGGCGGTCAGCATCCACGTCGATaGCGCGCTCGAAGGCCGCAAAGAACTCTTCGCCCT +
Preference number: 3 (lower is better)
Translates to: PPHSQGGQHPRR*RARRPQRTLRP
Trigger: AGGGCGAAGAGTTCTTTGCGGCCTTCGAGCGCGGCATCGACGTGGATGCTGACCGCCCTGACTGTGTGGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
3UTR GCA 72 bp TCTGCTCATCCAGATCATCCCGGAACTCGTGCCGGATaGGCTGCACCTCCCGGTAGGACACCCCCAGGTGCA +
Preference number: 3 (lower is better)
Translates to: SAHPDHPGTRAG*AAPPGRTPPGA
Trigger: TGCACCTGGGGGTGTCCTACCGGGAGGTGCAGCGCATCCGGCACGAGTTCCGGGATGATCTGGATGAGCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
3UTR-3UTR CAA 90 bp GATGCTGTCCTGGTACTTGCGGCGGCCGAGCTCCAAGACTGCGCGCACCTCTTCACACACTGGAGAGACTaGAAGGTGGGGGCTCTGCCC +
Preference number: 3 (lower is better)
Translates to: DAVLVLAAAELQDCAHLFTHWRD*KVGALP
Trigger: GGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGT...GAAGAGGTGCGCGCAGTCTTGGAGCTCGGCCGCCGCAAGTACCAGGACAGCATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
3UTR-3UTR CAA 90 bp AGCAGTGTCCCCTCCGGTGGCACCAGGCAGGCATTGGACACAGGGCGGGAAACCAGCGTCTGCAGGCGGTaGTGTGTCACTGTGAGGAAG +
Preference number: 3 (lower is better)
Translates to: SSVPSGGTRQALDTGRETSVCRR*CVTVRK
Trigger: CTTCCTCACAGTGACACACAACCGCCTGCAGACGCT...GGTTTCCCGCCCTGTGTCCAATGCCTGCCTGGTGCCACCGGAGGGGACACTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
3UTR-3UTR CAA 90 bp AGCCGCTCCCAGGCCTTCCGAGCCAGGCCTCCCACACAGTTCTTGGTGGTGTACAGGTCACCCCAGCTGTaGTCATTCCGGGTCCTGACC +
Preference number: 3 (lower is better)
Translates to: SRSQAFRARPPTQFLVVYRSPQL*SFRVLT
Trigger: GGTCAGGACCCGGAATGACAACAGCTGGGGTGACCT...GTACACCACCAAGAACTGTGTGGGAGGCCTGGCTCGGAAGGCCTGGGAGCGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
3UTR-3UTR CAA 90 bp CTCGGACCCTCGAAGTCTCGGCAGCTTGATGGGCAGAGTGGCCATCCACAGGGCAGTGTCTCCAGGCTGTaGAAGCTCAGGTCCAGGTGG +
Preference number: 3 (lower is better)
Translates to: LGPSKSRQLDGQSGHPQGSVSRL*KLRSRW
Trigger: CCACCTGGACCTGAGCTTCAACAGCCTGGAGACACT...GCCCTGTGGATGGCCACTCTGCCCATCAAGCTGCCGAGACTTCGAGGGTCCGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
3UTR-3UTR CAA 90 bp ATGCTGTCCTGGTACTTGCGGCGGCCGAGCTCCAAGACTGCGCGCACCTCTTCAAGGTCACCCCAGCTGTaGTCATTCCGGGTCCTGACC +
Preference number: 3 (lower is better)
Translates to: MLSWYLRRPSSKTARTSSRSPQL*SFRVLT
Trigger: GGTCAGGACCCGGAATGACAACAGCTGGGGTGACCT...TGAAGAGGTGCGCGCAGTCTTGGAGCTCGGCCGCCGCAAGTACCAGGACAGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
3UTR CCA 72 bp ACAGCAGTGTCCCCTCCGGTGGCACCAGGCAGGCATTaGACACAGGGCGGGAAACCACAAGGAACCAGGAGA +
Preference number: 3 (lower is better)
Translates to: TAVSPPVAPGRH*TQGGKPQGTRR
Trigger: TCTCCTGGTTCCTTGTGGTTTCCCGCCCTGTGTCCAATGCCTGCCTGGTGCCACCGGAGGGGACACTGCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
3UTR-3UTR CAA 90 bp AGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGGCCAGCCACACACTGGAGAGACTaGAAGGTGGGGGCTCTGCCC +
Preference number: 3 (lower is better)
Translates to: RDLKVGALPIHWGISGPATHWRD*KVGALP
Trigger: GGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGT...GGCTGGCCCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
3UTR CCA 72 bp CCCAGGCCTTCCGAGCCAGGCCTCCCACACAGTTCTTaGTGGTGTACCAGAGCCAGTACCAGGAGAAGTGTG +
Preference number: 3 (lower is better)
Translates to: PRPSEPGLPHSS*WCTRASTRRSV
Trigger: CACACTTCTCCTGGTACTGGCTCTGGTACACCACCAAGAACTGTGTGGGAGGCCTGGCTCGGAAGGCCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524486.5
3UTR-3UTR CAA 90 bp GCCAAGCCCATGCGTCGGATGCTGTCCTGGTACTTGCGGCGGCCGAGCTCCAAGAGAAACAGTGCAGTTTaGTTGCTCACAGGGACCCGT +
Preference number: 3 (lower is better)
Translates to: AKPMRRMLSWYLRRPSSKRNSAV*LLTGTR
Trigger: ACGGGTCCCTGTGAGCAACAAAACTGCACTGTTTCT...CTTGGAGCTCGGCCGCCGCAAGTACCAGGACAGCATCCGACGCATGGGCTTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
3UTR TCA 72 bp CCTCCAATCTCAGGAGGTAGCGTGTCCAGCAGATTCTaGGAGAGATCGAGGCGCTGCAGGGTGGATAGGGCC +
Preference number: 3 (lower is better)
Translates to: PPISGGSVSSRF*ERSRRCRVDRA
Trigger: GGCCCTATCCACCCTGCAGCGCCTCGATCTCTCTCAGAATCTGCTGGACACGCTACCTCCTGAGATTGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
3UTR-3UTR CAA 90 bp AGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGGCCAGCCAGAAACAGTGCAGTTTaGTTGCTCACAGGGACCCGT +
Preference number: 3 (lower is better)
Translates to: RDLKVGALPIHWGISGPARNSAV*LLTGTR
Trigger: ACGGGTCCCTGTGAGCAACAAAACTGCACTGTTTCT...GGCTGGCCCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
3UTR-3UTR CAA 90 bp CACATTCTTCAGGTGCGAGTAGAAGACAAAGCAGATTCTGCCCTCCACACAGTCACACACTGGAGAGACTaGAAGGTGGGGGCTCTGCCC +
Preference number: 3 (lower is better)
Translates to: HILQVRVEDKADSALHTVTHWRD*KVGALP
Trigger: GGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGT...GACTGTGTGGAGGGCAGAATCTGCTTTGTCTTCTACTCGCACCTGAAGAATGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
3UTR GCA 72 bp CATTCTTCAGGTGCGAGTAGAAGACAAAGCAGATTCTaGCCTCCACACAGTCAGGGCGGTCAGCATCCACGT +
Preference number: 3 (lower is better)
Translates to: HSSGASRRQSRF*PPHSQGGQHPR
Trigger: ACGTGGATGCTGACCGCCCTGACTGTGTGGAGGGCAGAATCTGCTTTGTCTTCTACTCGCACCTGAAGAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp CCCTCGAACATCTCCACCGTGTCAGAGGGCTCGGGGCCCCGGTACCGCTCCAGCCCCACAGCCCCTGGCTaGCCAGCCTGGCGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: PSNISTVSEGSGPRYRSSPTAPG*PAWRSA
Trigger: GGCTGAGCGCCAGGCTGGGCAGCCAGGGGCTGTGGG...GCTGGAGCGGTACCGGGGCCCCGAGCCCTCTGACACGGTGGAGATGTTCGAGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CCA 90 bp GTCATTCCGGGTCCTGACCACCACTTCACGGCAGCGCCGGGCCTGCGGTGGGGTCAGGGGGACGAGGCCTaGCTCCGGCAGCAGCAGCCG +
Preference number: 4 (lower is better)
Translates to: VIPGPDHHFTAAPGLRWGQGDEA*LRQQQP
Trigger: CGGCTGCTGCTGCCGGAGCCAGGCCTCGTCCCCCTG...ACCCCACCGCAGGCCCGGCGCTGCCGTGAAGTGGTGGTCAGGACCCGGAATGAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
CDS-3UTR TCA 90 bp GGCGGCCGAGCTCCAAGACTGCGCGCACCTCTTCAGCCACGTCCTGCCGGTCACTGGGGCACCTGGCAGTaGGCCCAGAGCCGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: GGRAPRLRAPLQPRPAGHWGTWQ*AQSRWG
Trigger: ACCCCAGCGGCTCTGGGCTCACTGCCAGGTGCCCCA...GTGACCGGCAGGACGTGGCTGAAGAGGTGCGCGCAGTCTTGGAGCTCGGCCGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp CGGGCAGGTTGGTCAGGGCACCCCGGAGACAGGCACCCAGTGTGTCCCGGCGTTCACTGCAGCAGGACCTaGTCAGGGTCCCGGCGCCGC +
Preference number: 4 (lower is better)
Translates to: RAGWSGHPGDRHPVCPGVHCSRT*SGSRRR
Trigger: GCGGCGCCGGGACCCTGAGCAGGTCCTGCTGCAGTG...AACGCCGGGACACACTGGGTGCCTGTCTCCGGGGTGCCCTGACCAACCTGCCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
CDS-3UTR GCA 90 bp TGGGGGTGGCGGTGGCTCCCGCTGGGAACTGCAGGCGGACGCCACAGGCCAGGGCAGCATCCACGTCGATaGCGCGCTCGAAGGCCGCAA +
Preference number: 4 (lower is better)
Translates to: WGWRWLPLGTAGGRHRPGQHPRR*RARRPQ
Trigger: TTGCGGCCTTCGAGCGCGGCATCGACGTGGATGCTG...CCCTGGCCTGTGGCGTCCGCCTGCAGTTCCCAGCGGGAGCCACCGCCACCCCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
CDS-3UTR GCA 90 bp TGGGGGCCAAGCCCATGCGTCGGATGCTGTCCTGGTACTTGCGGCGGCCGAGCTCCCACAGCCCCTGGCTaGCCAGCCTGGCGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: WGPSPCVGCCPGTCGGRAPTAPG*PAWRSA
Trigger: GGCTGAGCGCCAGGCTGGGCAGCCAGGGGCTGTGGG...AGCTCGGCCGCCGCAAGTACCAGGACAGCATCCGACGCATGGGCTTGGCCCCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp GCGGCGGCCGAGCTCCAAGACTGCGCGCACCTCTTCAGCCACGTCCTGCCGGTCGCGCTGGGACACTCCTaGTGCCGCCTCCCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: AAAELQDCAHLFSHVLPVALGHS*CRLPEQ
Trigger: CTGCTCTGGGAGGCGGCAGCAGGAGTGTCCCAGCGC...GACCGGCAGGACGTGGCTGAAGAGGTGCGCGCAGTCTTGGAGCTCGGCCGCCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524486.5
CDS-3UTR CCA 90 bp CTCGAACATCTCCACCGTGTCAGAGGGCTCGGGGCCCCGGTACCGCTCCAGCAGCAGGGGGACGAGGCCTaGCTCCGGCAGCAGCAGCCG +
Preference number: 4 (lower is better)
Translates to: LEHLHRVRGLGAPVPLQQQGDEA*LRQQQP
Trigger: CGGCTGCTGCTGCCGGAGCCAGGCCTCGTCCCCCTG...CTGCTGGAGCGGTACCGGGGCCCCGAGCCCTCTGACACGGTGGAGATGTTCGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CCA 90 bp CCGGATGCGCTGCACCTCCCGGTAGGACACCCCCAGGTGCAGGGCCACGGCTGGCGTCGGATGCTGTCCTaGTACTTGCGGCGGCCGAGC +
Preference number: 4 (lower is better)
Translates to: PDALHLPVGHPQVQGHGWRRMLS*YLRRPS
Trigger: GCTCGGCCGCCGCAAGTACCAGGACAGCATCCGACG...CCAGCCGTGGCCCTGCACCTGGGGGTGTCCTACCGGGAGGTGCAGCGCATCCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CCA 90 bp CCGGATGCGCTGCACCTCCCGGTAGGACACCCCCAGGTGCAGGGCCACGGCTGGCAGGCCATCTGGGCCTaGGCTGCAGAGTGGGGGAGA +
Preference number: 4 (lower is better)
Translates to: PDALHLPVGHPQVQGHGWQAIWA*AAEWGR
Trigger: TCTCCCCCACTCTGCAGCCCAGGCCCAGATGGCCTG...CCAGCCGTGGCCCTGCACCTGGGGGTGTCCTACCGGGAGGTGCAGCGCATCCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
CDS-3UTR CCA 90 bp GGGCCAAGCCCATGCGTCGGATGCTGTCCTGGTACTTGCGGCGGCCGAGCTCCACCCAGCCCACGGCGCTaGGACACTCCTGCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: GPSPCVGCCPGTCGGRAPPSPRR*DTPAAA
Trigger: GGCGGCAGCAGGAGTGTCCCAGCGCCGTGGGCTGGG...TGGAGCTCGGCCGCCGCAAGTACCAGGACAGCATCCGACGCATGGGCTTGGCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524486.5
CDS-3UTR TCA 90 bp TCCTTGGGGGCCAAGCCCATGCGTCGGATGCTGTCCTGGTACTTGCGGCGGCCGTGGGGCACCTGGCAGTaGGCCCAGAGCCGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: SLGAKPMRRMLSWYLRRPWGTWQ*AQSRWG
Trigger: ACCCCAGCGGCTCTGGGCTCACTGCCAGGTGCCCCA...CGGCCGCCGCAAGTACCAGGACAGCATCCGACGCATGGGCTTGGCCCCCAAGGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp CCCTCGAACATCTCCACCGTGTCAGAGGGCTCGGGGCCCCGGTACCGCTCCAGCCACTGGGGAGGGTGGTaGACCGCGCACCGCTCAGAC +
Preference number: 4 (lower is better)
Translates to: PSNISTVSEGSGPRYRSSHWGGW*TAHRSD
Trigger: GTCTGAGCGGTGCGCGGTGCACCACCCTCCCCAGTG...GCTGGAGCGGTACCGGGGCCCCGAGCCCTCTGACACGGTGGAGATGTTCGAGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524486.5
CDS-3UTR CCA 90 bp CCGGATGCGCTGCACCTCCCGGTAGGACACCCCCAGGTGCAGGGCCACGGCTGGGCGGGCCAAGTCAGCTaGCACAGAGGCCAGGAGGTT +
Preference number: 4 (lower is better)
Translates to: PDALHLPVGHPQVQGHGWAGQVS*HRGQEV
Trigger: AACCTCCTGGCCTCTGTGCCAGCTGACTTGGCCCGC...CCAGCCGTGGCCCTGCACCTGGGGGTGTCCTACCGGGAGGTGCAGCGCATCCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
CDS-3UTR CCA 90 bp CACAGCAGTGTCCCCTCCGGTGGCACCAGGCAGGCATTGGACACAGGGCGGGAAGGCGGTGGCTCCCGCTaGGAACTGCAGGCGGACGCC +
Preference number: 4 (lower is better)
Translates to: HSSVPSGGTRQALDTGREGGGSR*ELQADA
Trigger: GGCGTCCGCCTGCAGTTCCCAGCGGGAGCCACCGCC...TTCCCGCCCTGTGTCCAATGCCTGCCTGGTGCCACCGGAGGGGACACTGCTGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
CDS-3UTR CCA 90 bp CGGGCAGGTTGGTCAGGGCACCCCGGAGACAGGCACCCAGTGTGTCCCGGCGTTGCAGAGCGGGGTCCTTaGGGGCCAAGCCCATGCGTC +
Preference number: 4 (lower is better)
Translates to: RAGWSGHPGDRHPVCPGVAERGP*GPSPCV
Trigger: GACGCATGGGCTTGGCCCCCAAGGACCCCGCTCTGC...AACGCCGGGACACACTGGGTGCCTGTCTCCGGGGTGCCCTGACCAACCTGCCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
CDS-3UTR CCA 90 bp CCCTCGAACATCTCCACCGTGTCAGAGGGCTCGGGGCCCCGGTACCGCTCCAGCGCAGAGCGGGGTCCTTaGGGGCCAAGCCCATGCGTC +
Preference number: 4 (lower is better)
Translates to: PSNISTVSEGSGPRYRSSAERGP*GPSPCV
Trigger: GACGCATGGGCTTGGCCCCCAAGGACCCCGCTCTGC...GCTGGAGCGGTACCGGGGCCCCGAGCCCTCTGACACGGTGGAGATGTTCGAGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CCA 90 bp TCCTTGGGGGCCAAGCCCATGCGTCGGATGCTGTCCTGGTACTTGCGGCGGCCGTCAGGGACCCTCCCGTaGGGCCAGTGTGTCGGGGCG +
Preference number: 4 (lower is better)
Translates to: SLGAKPMRRMLSWYLRRPSGTLP*GQCVGA
Trigger: CGCCCCGACACACTGGCCCCACGGGAGGGTCCCTGA...CGGCCGCCGCAAGTACCAGGACAGCATCCGACGCATGGGCTTGGCCCCCAAGGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524486.5
CDS-3UTR TCA 90 bp TCCTTGGGGGCCAAGCCCATGCGTCGGATGCTGTCCTGGTACTTGCGGCGGCCGTCAGGTCGAGCCGGGTaGGGAGTGGAAGGCGGGCCA +
Preference number: 4 (lower is better)
Translates to: SLGAKPMRRMLSWYLRRPSGRAG*GVEGGP
Trigger: TGGCCCGCCTTCCACTCCTCACCCGGCTCGACCTGA...CGGCCGCCGCAAGTACCAGGACAGCATCCGACGCATGGGCTTGGCCCCCAAGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
CDS-3UTR TCA 90 bp GGCGGCCGAGCTCCAAGACTGCGCGCACCTCTTCAGCCACGTCCTGCCGGTCACACCTTGTGGTCACCCTaGACCCCGGAGGCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: GGRAPRLRAPLQPRPAGHTLWSP*TPEAWV
Trigger: GACCCAGGCCTCCGGGGTTCAGGGTGACCACAAGGT...GTGACCGGCAGGACGTGGCTGAAGAGGTGCGCGCAGTCTTGGAGCTCGGCCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
CDS-3UTR TCA 90 bp CGGGCAGGTTGGTCAGGGCACCCCGGAGACAGGCACCCAGTGTGTCCCGGCGTTCCCAGATCGACCCTTTaGGGACCAGGGAGCGGAGGC +
Preference number: 4 (lower is better)
Translates to: RAGWSGHPGDRHPVCPGVPRSTL*GPGSGG
Trigger: GCCTCCGCTCCCTGGTCCTCAAAGGGTCGATCTGGG...AACGCCGGGACACACTGGGTGCCTGTCTCCGGGGTGCCCTGACCAACCTGCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
CDS-3UTR GCA 90 bp CCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGAGCGCCCGGGGAAGCTaGGCTGCAGGCGGCGCGCAA +
Preference number: 4 (lower is better)
Translates to: PVPTHWRDLKVGALPIHWSARGS*AAGGAQ
Trigger: TTGCGCGCCGCCTGCAGCGCAGCTTCCCCGGGCGCT...CCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000347755.10
CDS-3UTR GCA 90 bp GGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACCGGCAGCGCCGGGCCTaGGGTGGGGTGAAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: GPVPTHWRDLKVGALPIHRQRRA*GGVKSS
Trigger: GCTGCTCTTCACCCCACCGCAGGCCCGGCGCTGCCG...GTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp GTCAGGGCGGTCAGCATCCACGTCGATGCCGCGCTCGAAGGCCGCAAAGAACTCCGGCAGCGCCGGGCCTaGGGTGGGGTGAAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: VRAVSIHVDAALEGRKELRQRRA*GGVKSS
Trigger: GCTGCTCTTCACCCCACCGCAGGCCCGGCGCTGCCG...GAGTTCTTTGCGGCCTTCGAGCGCGGCATCGACGTGGATGCTGACCGCCCTGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp GAACTCGTGCCGGATGCGCTGCACCTCCCGGTAGGACACCCCCAGGTGCAGGGCGAGGGCAGAGGCAGCTaGACGGTGACCGGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: ELVPDALHLPVGHPQVQGEGRGS*TVTGWR
Trigger: CCTCCAACCGGTCACCGTGCAGCTGCCTCTGCCCTC...GCCCTGCACCTGGGGGTGTCCTACCGGGAGGTGCAGCGCATCCGGCACGAGTTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp TGGGGGCCAAGCCCATGCGTCGGATGCTGTCCTGGTACTTGCGGCGGCCGAGCTCATCCACAGGGCGTCTaGGCCCTTCCTCTGCCGGGC +
Preference number: 4 (lower is better)
Translates to: WGPSPCVGCCPGTCGGRAHPQGV*ALPLPG
Trigger: GCCCGGCAGAGGAAGGGCGCAGACGCCCTGTGGATG...AGCTCGGCCGCCGCAAGTACCAGGACAGCATCCGACGCATGGGCTTGGCCCCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CCA 90 bp GAGGTTCACACGGTGCAGCCGCAGCCGCTCCCAGGCCTTCCGAGCCAGGCCTCCCCCACCGACGGTCCTTaGAGGCCAGACATGTCCCAG +
Preference number: 4 (lower is better)
Translates to: EVHTVQPQPLPGLPSQASPTDGP*RPDMSQ
Trigger: CTGGGACATGTCTGGCCTCCAAGGACCGTCGGTGGG...GGAGGCCTGGCTCGGAAGGCCTGGGAGCGGCTGCGGCTGCACCGTGTGAACCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
CDS-3UTR CCA 90 bp CGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGGGCGGTGGCTCCCGCTaGGAACTGCAGGCGGACGCC +
Preference number: 4 (lower is better)
Translates to: RPHTLERLEGGGSAHPLGGGGSR*ELQADA
Trigger: GGCGTCCGCCTGCAGTTCCCAGCGGGAGCCACCGCC...CCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACG
69% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CCA 90 bp GGCAGAGCGGGGTCCTTGGGGGCCAAGCCCATGCGTCGGATGCTGTCCTGGTACGCAGCTTCGGGGTCCTaGGGCCGGGACCCCAATTCG +
Preference number: 4 (lower is better)
Translates to: GRAGSLGAKPMRRMLSWYAASGS*GRDPNS
Trigger: CGAATTGGGGTCCCGGCCCCAGGACCCCGAAGCTGC...GTACCAGGACAGCATCCGACGCATGGGCTTGGCCCCCAAGGACCCCGCTCTGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000524486.5
3UTR CAA 72 bp ACCGAAGTCCCGCTGCGGGCAGTTGCTGGCTTAGGCTaGGCACCAGCCCAGCCCACGGCGCTGGGACACTCC +
Preference number: 4 (lower is better)
Translates to: TEVPLRAVAGLG*APAQPTALGHS
Trigger: GGAGTGTCCCAGCGCCGTGGGCTGGGCTGGTGCCAAGCCTAAGCCAGCAACTGCCCGCAGCGGGACTTCGGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524486.5
CDS-3UTR TCA 90 bp AGAGCGGGGTCCTTGGGGGCCAAGCCCATGCGTCGGATGCTGTCCTGGTACTTGGGGCCTGCGGTGGGGTaGAGAGCAGCCACAGCCCCA +
Preference number: 4 (lower is better)
Translates to: RAGSLGAKPMRRMLSWYLGPAVG*RAATAP
Trigger: TGGGGCTGTGGCTGCTCTTCACCCCACCGCAGGCCC...CAAGTACCAGGACAGCATCCGACGCATGGGCTTGGCCCCCAAGGACCCCGCTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR TCA 90 bp GGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGCACCTGGCAGTaGGCCCAGAGCCGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: GPVPTHWRDLKVGALPIHWGTWQ*AQSRWG
Trigger: ACCCCAGCGGCTCTGGGCTCACTGCCAGGTGCCCCA...GTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp ACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCGCGCAAAGGGTGGCTaGTCAGCGGGCGCTCGGCGC +
Preference number: 4 (lower is better)
Translates to: TGTRPHTLERLEGGGSAHRAKGG*SAGARR
Trigger: GCGCCGAGCGCCCGCTGAGCAGCCACCCTTTGCGCG...ATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000347755.10
CDS-3UTR GCA 90 bp CCGCTGCAGAGCGATGAGGTTCACACGGTGCAGCCGCAGCCGCTCCCAGGCCTTCCAAGCTCAGCCGGTTaGCGCCCAGGAAAGGCAGCG +
Preference number: 4 (lower is better)
Translates to: PLQSDEVHTVQPQPLPGLPSSAG*RPGKAA
Trigger: CGCTGCCTTTCCTGGGCGGCAACCGGCTGAGCTTGG...AAGGCCTGGGAGCGGCTGCGGCTGCACCGTGTGAACCTCATCGCTCTGCAGCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
CDS-3UTR GCA 90 bp GAACTCGTGCCGGATGCGCTGCACCTCCCGGTAGGACACCCCCAGGTGCAGGGCCCCAGACCTCGCATCTaGAGGACACAGGCCGGCAGT +
Preference number: 4 (lower is better)
Translates to: ELVPDALHLPVGHPQVQGPRPRI*RTQAGS
Trigger: ACTGCCGGCCTGTGTCCTGCAGATGCGAGGTCTGGG...GCCCTGCACCTGGGGGTGTCCTACCGGGAGGTGCAGCGCATCCGGCACGAGTTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
CDS-3UTR GCA 90 bp GGGCCAAGCCCATGCGTCGGATGCTGTCCTGGTACTTGCGGCGGCCGAGCTCCAGAGAGATCGAGGCGCTaGAGGGTGGATAGGGCCCCC +
Preference number: 4 (lower is better)
Translates to: GPSPCVGCCPGTCGGRAPERSRR*RVDRAP
Trigger: GGGGGCCCTATCCACCCTGCAGCGCCTCGATCTCTC...TGGAGCTCGGCCGCCGCAAGTACCAGGACAGCATCCGACGCATGGGCTTGGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
CDS-3UTR GCA 90 bp AGCCGCTCCCAGGCCTTCCGAGCCAGGCCTCCCACACAGTTCTTGGTGGTGTACGCTCCCGCTGGGAACTaGAGGCGGACGCCACAGGCC +
Preference number: 4 (lower is better)
Translates to: SRSQAFRARPPTQFLVVYAPAGN*RRTPQA
Trigger: GGCCTGTGGCGTCCGCCTGCAGTTCCCAGCGGGAGC...GTACACCACCAAGAACTGTGTGGGAGGCCTGGCTCGGAAGGCCTGGGAGCGGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
CDS-3UTR GCA 90 bp ATGCTGTCCTGGTACTTGCGGCGGCCGAGCTCCAAGACTGCGCGCACCTCTTCACGGCAGCGCCGGGCCTaGGGTGGGGTGAAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: MLSWYLRRPSSKTARTSSRQRRA*GGVKSS
Trigger: GCTGCTCTTCACCCCACCGCAGGCCCGGCGCTGCCG...TGAAGAGGTGCGCGCAGTCTTGGAGCTCGGCCGCCGCAAGTACCAGGACAGCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp CGGGCAGGTTGGTCAGGGCACCCCGGAGACAGGCACCCAGTGTGTCCCGGCGTTCAGCAGGGGGCTCACTaGAGCCTCTGGTTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: RAGWSGHPGDRHPVCPGVQQGAH*SLWFSQ
Trigger: CTGGGAGAACCAGAGGCTGCAGTGAGCCCCCTGCTG...AACGCCGGGACACACTGGGTGCCTGTCTCCGGGGTGCCCTGACCAACCTGCCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
CDS-3UTR GCA 90 bp GAGGTTCACACGGTGCAGCCGCAGCCGCTCCCAGGCCTTCCGAGCCAGGCCTCCGTCATCCCAGGTGGCTaGAGGAGGGGCCCAGTACAA +
Preference number: 4 (lower is better)
Translates to: EVHTVQPQPLPGLPSQASVIPGG*RRGPVQ
Trigger: TTGTACTGGGCCCCTCCTGCAGCCACCTGGGATGAC...GGAGGCCTGGCTCGGAAGGCCTGGGAGCGGCTGCGGCTGCACCGTGTGAACCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
CDS-3UTR GCA 90 bp TCCTTGGGGGCCAAGCCCATGCGTCGGATGCTGTCCTGGTACTTGCGGCGGCCGGGGTCCCGGCGCCGCTaGAGAGCGATGAGGTTCACA +
Preference number: 4 (lower is better)
Translates to: SLGAKPMRRMLSWYLRRPGSRRR*RAMRFT
Trigger: TGTGAACCTCATCGCTCTGCAGCGGCGCCGGGACCC...CGGCCGCCGCAAGTACCAGGACAGCATCCGACGCATGGGCTTGGCCCCCAAGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp GGCGGCCGAGCTCCAAGACTGCGCGCACCTCTTCAGCCACGTCCTGCCGGTCACTTTCGGGGCAGGCACTaGAGCAGGACCTGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: GGRAPRLRAPLQPRPAGHFRGRH*SRTCSG
Trigger: CCCTGAGCAGGTCCTGCTGCAGTGCCTGCCCCGAAA...GTGACCGGCAGGACGTGGCTGAAGAGGTGCGCGCAGTCTTGGAGCTCGGCCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp CACAGCAGTGTCCCCTCCGGTGGCACCAGGCAGGCATTGGACACAGGGCGGGAACATCCACAGGGCGTCTaGGCCCTTCCTCTGCCGGGC +
Preference number: 4 (lower is better)
Translates to: HSSVPSGGTRQALDTGREHPQGV*ALPLPG
Trigger: GCCCGGCAGAGGAAGGGCGCAGACGCCCTGTGGATG...TTCCCGCCCTGTGTCCAATGCCTGCCTGGTGCCACCGGAGGGGACACTGCTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
CDS-3UTR GCA 90 bp GTCATTCCGGGTCCTGACCACCACTTCACGGCAGCGCCGGGCCTGCGGTGGGGTTACCGCGGGGGTGACTaGGCCCCGAAAGTCAGGGAA +
Preference number: 4 (lower is better)
Translates to: VIPGPDHHFTAAPGLRWGYRGGD*APKVRE
Trigger: TTCCCTGACTTTCGGGGCGCAGTCACCCCCGCGGTA...ACCCCACCGCAGGCCCGGCGCTGCCGTGAAGTGGTGGTCAGGACCCGGAATGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000524486.5
CDS-3UTR CCA 90 bp GAACTCGTGCCGGATGCGCTGCACCTCCCGGTAGGACACCCCCAGGTGCAGGGCCCCACCGACGGTCCTTaGAGGCCAGACATGTCCCAG +
Preference number: 4 (lower is better)
Translates to: ELVPDALHLPVGHPQVQGPTDGP*RPDMSQ
Trigger: CTGGGACATGTCTGGCCTCCAAGGACCGTCGGTGGG...GCCCTGCACCTGGGGGTGTCCTACCGGGAGGTGCAGCGCATCCGGCACGAGTTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
CDS-3UTR CCA 90 bp GTCCCCTCCGGTGGCACCAGGCAGGCATTGGACACAGGGCGGGAAACCACAAGGCGAGGCGCTGCAGGGTaGATAGGGCCCCCAGTGCTG +
Preference number: 4 (lower is better)
Translates to: VPSGGTRQALDTGRETTRRGAAG*IGPPVL
Trigger: CAGCACTGGGGGCCCTATCCACCCTGCAGCGCCTCG...CCTTGTGGTTTCCCGCCCTGTGTCCAATGCCTGCCTGGTGCCACCGGAGGGGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
CDS-3UTR CCA 90 bp GTCATTCCGGGTCCTGACCACCACTTCACGGCAGCGCCGGGCCTGCGGTGGGGTGCGGGCCAAGTCAGCTaGCACAGAGGCCAGGAGGTT +
Preference number: 4 (lower is better)
Translates to: VIPGPDHHFTAAPGLRWGAGQVS*HRGQEV
Trigger: AACCTCCTGGCCTCTGTGCCAGCTGACTTGGCCCGC...ACCCCACCGCAGGCCCGGCGCTGCCGTGAAGTGGTGGTCAGGACCCGGAATGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
CDS-3UTR CCA 90 bp GGCCAGCCATGCGCACCACCTGCATGGAGACTCGACGAGGCTCCTCAGTGGCCCGGCAGGTCCCGGAGCTaGTTGTCCCTCAGGTCGAGC +
Preference number: 4 (lower is better)
Translates to: GQPCAPPAWRLDEAPQWPGRSRS*LSLRSS
Trigger: GCTCGACCTGAGGGACAACCAGCTCCGGGACCTGCC...GGGCCACTGAGGAGCCTCGTCGAGTCTCCATGCAGGTGGTGCGCATGGCTGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
CDS-3UTR CCA 90 bp ACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCAGGGGGACGAGGCCTaGCTCCGGCAGCAGCAGCCG +
Preference number: 4 (lower is better)
Translates to: TGTRPHTLERLEGGGSAHQGDEA*LRQQQP
Trigger: CGGCTGCTGCTGCCGGAGCCAGGCCTCGTCCCCCTG...ATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CCA 90 bp GGGCCAAGCCCATGCGTCGGATGCTGTCCTGGTACTTGCGGCGGCCGAGCTCCAGAGCGGGAGCCGGGGTaGGCCCTTCTCTTTGGGGAA +
Preference number: 4 (lower is better)
Translates to: GPSPCVGCCPGTCGGRAPEREPG*ALLFGE
Trigger: TTCCCCAAAGAGAAGGGCCCACCCCGGCTCCCGCTC...TGGAGCTCGGCCGCCGCAAGTACCAGGACAGCATCCGACGCATGGGCTTGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
3UTR CAA 72 bp GGGGCCAAGCCCATGCGTCGGATGCTGTCCTGGTACTaGCGGCGGCCGAGCTCCAAGACTGCGCGCACCTCT +
Preference number: 4 (lower is better)
Translates to: GAKPMRRMLSWY*RRPSSKTARTS
Trigger: AGAGGTGCGCGCAGTCTTGGAGCTCGGCCGCCGCAAGTACCAGGACAGCATCCGACGCATGGGCTTGGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR TCA 90 bp GCCCTCGAACATCTCCACCGTGTCAGAGGGCTCGGGGCCCCGGTACCGCTCCAGGTGTCTCCAGGCTGTTaGAGCTCAGGTCCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: ALEHLHRVRGLGAPVPLQVSPGC*SSGPGG
Trigger: CCCACCTGGACCTGAGCTTCAACAGCCTGGAGACAC...CTGGAGCGGTACCGGGGCCCCGAGCCCTCTGACACGGTGGAGATGTTCGAGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
CDS-3UTR TCA 90 bp TCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCGAGGGCTGCCACTGGTaGACTCGGGGCGTCTGGCGA +
Preference number: 4 (lower is better)
Translates to: SQGPVPTHWRDLKVGALPEGCHW*TRGVWR
Trigger: TCGCCAGACGCCCCGAGTTCACCAGTGGCAGCCCTC...GGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR TCA 90 bp CACACAGTCAGGGCGGTCAGCATCCACGTCGATGCCGCGCTCGAAGGCCGCAAAGCCGATAGCGGATGGTaGTGGGGGTGGCGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: HTVRAVSIHVDAALEGRKADSGW*WGWRWL
Trigger: GAGCCACCGCCACCCCCATCACCATCCGCTATCGGC...TTTGCGGCCTTCGAGCGCGGCATCGACGTGGATGCTGACCGCCCTGACTGTGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR TCA 90 bp GGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACCTGAGCAGGGCGTCATaGGGACCCAGGGGGACGAGG +
Preference number: 4 (lower is better)
Translates to: GPVPTHWRDLKVGALPIHLSRAS*GPRGTR
Trigger: CCTCGTCCCCCTGGGTCCTCATGACGCCCTGCTCAG...GTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR TCA 90 bp GGCGGCCGAGCTCCAAGACTGCGCGCACCTCTTCAGCCACGTCCTGCCGGTCACTGTCATTCCGGGTCCTaGCCACCACTTCACGGCAGC +
Preference number: 4 (lower is better)
Translates to: GGRAPRLRAPLQPRPAGHCHSGS*PPLHGS
Trigger: GCTGCCGTGAAGTGGTGGTCAGGACCCGGAATGACA...GTGACCGGCAGGACGTGGCTGAAGAGGTGCGCGCAGTCTTGGAGCTCGGCCGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR TCA 90 bp CGGATGCTGTCCTGGTACTTGCGGCGGCCGAGCTCCAAGACTGCGCGCACCTCTGAGGCAGCTGCACGGTaGCCGGTTGGAGGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: RMLSWYLRRPSSKTARTSEAAAR*PVGGSW
Trigger: CCAGCTTCCTCCAACCGGTCACCGTGCAGCTGCCTC...AGAGGTGCGCGCAGTCTTGGAGCTCGGCCGCCGCAAGTACCAGGACAGCATCCG
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR TCA 90 bp GTCATTCCGGGTCCTGACCACCACTTCACGGCAGCGCCGGGCCTGCGGTGGGGTGGACCACCTGAGCTGTaGTGTCATCCCAGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: VIPGPDHHFTAAPGLRWGGPPEL*CHPRWL
Trigger: CAGCCACCTGGGATGACATCACAGCTCAGGTGGTCC...ACCCCACCGCAGGCCCGGCGCTGCCGTGAAGTGGTGGTCAGGACCCGGAATGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
CDS-3UTR TCA 90 bp CGGGCAGGTTGGTCAGGGCACCCCGGAGACAGGCACCCAGTGTGTCCCGGCGTTCACACTGGAGAGACTTaGAGGTGGGGGCTCTGCCCA +
Preference number: 4 (lower is better)
Translates to: RAGWSGHPGDRHPVCPGVHTGET*RWGLCP
Trigger: TGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTG...AACGCCGGGACACACTGGGTGCCTGTCTCCGGGGTGCCCTGACCAACCTGCCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
CDS-3UTR TCA 90 bp CTGGCCCCGCACAGCCTGAGCCTCCCGGTCCAGAGTGGTGGTCACGTATACCTCCCCAGATCGACCCTTTaGGGACCAGGGAGCGGAGGC +
Preference number: 4 (lower is better)
Translates to: LAPHSLSLPVQSGGHVYLPRSTL*GPGSGG
Trigger: GCCTCCGCTCCCTGGTCCTCAAAGGGTCGATCTGGG...GAGGTATACGTGACCACCACTCTGGACCGGGAGGCTCAGGCTGTGCGGGGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
CDS-3UTR GCA 90 bp CCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGTGGCCCCTCCACCGTTaGAGCCATCGCCCACCGACG +
Preference number: 4 (lower is better)
Translates to: PVPTHWRDLKVGALPIHWWPLHR*SHRPPT
Trigger: CGTCGGTGGGCGATGGCTGCAACGGTGGAGGGGCCA...CCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
CDS-3UTR GCA 90 bp CTCGAACATCTCCACCGTGTCAGAGGGCTCGGGGCCCCGGTACCGCTCCAGCAGTGCTGGACACACAGGTaGAGCAGCTGCTGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: LEHLHRVRGLGAPVPLQQCWTHR*SSCWQP
Trigger: GGGCTGCCAGCAGCTGCTGCACCTGTGTGTCCAGCA...CTGCTGGAGCGGTACCGGGGCCCCGAGCCCTCTGACACGGTGGAGATGTTCGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
CDS-3UTR GCA 90 bp CCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGAGGCTGGGAGGCTCTaGAGCCGGTTGGAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: PVPTHWRDLKVGALPIHWEAGRL*SRLEAR
Trigger: CCTGGCCTCCAACCGGCTGCAGAGCCTCCCAGCCTC...CCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
CDS-3UTR GCA 90 bp GCATCCACGTCGATGCCGCGCTCGAAGGCCGCAAAGAACTCTTCGCCCTCGAACGCTCCCGCTGGGAACTaGAGGCGGACGCCACAGGCC +
Preference number: 4 (lower is better)
Translates to: ASTSMPRSKAAKNSSPSNAPAGN*RRTPQA
Trigger: GGCCTGTGGCGTCCGCCTGCAGTTCCCAGCGGGAGC...GTTCGAGGGCGAAGAGTTCTTTGCGGCCTTCGAGCGCGGCATCGACGTGGATGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp GAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGGCCAGCCGGCAGCGCCGGGCCTaGGGTGGGGTGAAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: ERLEGGGSAHPLGNIWASRQRRA*GGVKSS
Trigger: GCTGCTCTTCACCCCACCGCAGGCCCGGCGCTGCCG...GCTGGCCCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp CTGGCCCCGCACAGCCTGAGCCTCCCGGTCCAGAGTGGTGGTCACGTATACCTCGAGGGCAGAGGCAGCTaGACGGTGACCGGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: LAPHSLSLPVQSGGHVYLEGRGS*TVTGWR
Trigger: CCTCCAACCGGTCACCGTGCAGCTGCCTCTGCCCTC...GAGGTATACGTGACCACCACTCTGGACCGGGAGGCTCAGGCTGTGCGGGGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
CDS-3UTR GCA 90 bp CATCCCGGAACTCGTGCCGGATGCGCTGCACCTCCCGGTAGGACACCCCCAGGTGCCCAGTACAACAGGTaGAGGCGGGAGCGGTCCAGA +
Preference number: 4 (lower is better)
Translates to: HPGTRAGCAAPPGRTPPGAQYNR*RRERSR
Trigger: TCTGGACCGCTCCCGCCTGCACCTGTTGTACTGGGC...ACCTGGGGGTGTCCTACCGGGAGGTGCAGCGCATCCGGCACGAGTTCCGGGATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp CATCCCGGAACTCGTGCCGGATGCGCTGCACCTCCCGGTAGGACACCCCCAGGTATGAGGTTCACACGGTaGAGCCGCAGCCGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: HPGTRAGCAAPPGRTPPGMRFTR*SRSRSQ
Trigger: CTGGGAGCGGCTGCGGCTGCACCGTGTGAACCTCAT...ACCTGGGGGTGTCCTACCGGGAGGTGCAGCGCATCCGGCACGAGTTCCGGGATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp GAGGTTCACACGGTGCAGCCGCAGCCGCTCCCAGGCCTTCCGAGCCAGGCCTCCCTCAGCAGGTTGCTCTaGGTCAGAAAGCCGGTCTCG +
Preference number: 4 (lower is better)
Translates to: EVHTVQPQPLPGLPSQASLSRLL*VRKPVS
Trigger: CGAGACCGGCTTTCTGACGCAGAGCAACCTGCTGAG...GGAGGCCTGGCTCGGAAGGCCTGGGAGCGGCTGCGGCTGCACCGTGTGAACCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
CDS-3UTR GCA 90 bp GAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGGCCAGCCCCACAGCCCCTGGCTaGCCAGCCTGGCGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: ERLEGGGSAHPLGNIWASPTAPG*PAWRSA
Trigger: GGCTGAGCGCCAGGCTGGGCAGCCAGGGGCTGTGGG...GCTGGCCCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp CGGATGCTGTCCTGGTACTTGCGGCGGCCGAGCTCCAAGACTGCGCGCACCTCTTCCTGCCGGTCACTCTaGTCCAGGGCCTGCACCAGG +
Preference number: 4 (lower is better)
Translates to: RMLSWYLRRPSSKTARTSSCRSL*SRACTR
Trigger: CCTGGTGCAGGCCCTGGAGCAGAGTGACCGGCAGGA...AGAGGTGCGCGCAGTCTTGGAGCTCGGCCGCCGCAAGTACCAGGACAGCATCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp GGCAGAGCGGGGTCCTTGGGGGCCAAGCCCATGCGTCGGATGCTGTCCTGGTACGCCGAGCTCCAAGACTaGGCGCACCTCTTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: GRAGSLGAKPMRRMLSWYAELQD*AHLFSH
Trigger: GTGGCTGAAGAGGTGCGCGCAGTCTTGGAGCTCGGC...GTACCAGGACAGCATCCGACGCATGGGCTTGGCCCCCAAGGACCCCGCTCTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CCA 90 bp AGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGGCCAGCCGCGGCGCGCAAAGGGTaGCTGCTCAGCGGGCGCTCG +
Preference number: 4 (lower is better)
Translates to: RDLKVGALPIHWGISGPAAARKG*LLSGRS
Trigger: CGAGCGCCCGCTGAGCAGCCACCCTTTGCGCGCCGC...GGCTGGCCCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000347755.10
CDS-3UTR CCA 90 bp GAGGAGTGGAAGGCGGGCCAAGTCAGCTGGCACAGAGGCCAGGAGGTTGCTGTGCGAGGCGCTGCAGGGTaGATAGGGCCCCCAGTGCTG +
Preference number: 4 (lower is better)
Translates to: EEWKAGQVSWHRGQEVAVRGAAG*IGPPVL
Trigger: CAGCACTGGGGGCCCTATCCACCCTGCAGCGCCTCG...CACAGCAACCTCCTGGCCTCTGTGCCAGCTGACTTGGCCCGCCTTCCACTCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
CDS-3UTR CCA 90 bp GGCCAGCCATGCGCACCACCTGCATGGAGACTCGACGAGGCTCCTCAGTGGCCCCAGTGTCCCCTCCGGTaGCACCAGGCAGGCATTGGA +
Preference number: 4 (lower is better)
Translates to: GQPCAPPAWRLDEAPQWPQCPLR*HQAGIG
Trigger: TCCAATGCCTGCCTGGTGCCACCGGAGGGGACACTG...GGGCCACTGAGGAGCCTCGTCGAGTCTCCATGCAGGTGGTGCGCATGGCTGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
CDS-3UTR CCA 90 bp GGCAGAGCGGGGTCCTTGGGGGCCAAGCCCATGCGTCGGATGCTGTCCTGGTACCCGGTTGGAGGAAGCTaGGGGGACCGCTCTGTGACA +
Preference number: 4 (lower is better)
Translates to: GRAGSLGAKPMRRMLSWYPVGGS*GDRSVT
Trigger: TGTCACAGAGCGGTCCCCCCAGCTTCCTCCAACCGG...GTACCAGGACAGCATCCGACGCATGGGCTTGGCCCCCAAGGACCCCGCTCTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CCA 90 bp CTCGGACCCTCGAAGTCTCGGCAGCTTGATGGGCAGAGTGGCCATCCACAGGGCGTGCAGGGCCACGGCTaGCCAGTCCAGACCCAGACG +
Preference number: 4 (lower is better)
Translates to: LGPSKSRQLDGQSGHPQGVQGHG*PVQTQT
Trigger: CGTCTGGGTCTGGACTGGCCAGCCGTGGCCCTGCAC...GCCCTGTGGATGGCCACTCTGCCCATCAAGCTGCCGAGACTTCGAGGGTCCGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CCA 90 bp TCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCGCAGAGCGGGGTCCTTaGGGGCCAAGCCCATGCGTC +
Preference number: 4 (lower is better)
Translates to: SQGPVPTHWRDLKVGALPAERGP*GPSPCV
Trigger: GACGCATGGGCTTGGCCCCCAAGGACCCCGCTCTGC...GGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CCA 90 bp GGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCAGCAGAGCGGGGTCCTTaGGGGCCAAGCCCATGCGTC +
Preference number: 4 (lower is better)
Translates to: GTRPHTLERLEGGGSAHPAERGP*GPSPCV
Trigger: GACGCATGGGCTTGGCCCCCAAGGACCCCGCTCTGC...TGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CCA 90 bp TCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCGTCCACTGGGGAGGGTaGTGCACCGCGCACCGCTCA +
Preference number: 4 (lower is better)
Translates to: SQGPVPTHWRDLKVGALPVHWGG*CTAHRS
Trigger: TGAGCGGTGCGCGGTGCACCACCCTCCCCAGTGGAC...GGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000524486.5
CDS-3UTR TCA 90 bp TGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGTCAGGTCGAGCCGGGTaGGGAGTGGAAGGCGGGCCA +
Preference number: 4 (lower is better)
Translates to: CSQGPVPTHWRDLKVGALSGRAG*GVEGGP
Trigger: TGGCCCGCCTTCCACTCCTCACCCGGCTCGACCTGA...CAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
CDS-3UTR TCA 90 bp ACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGCTGAGCAGGGCGTCATaGGGACCCAGGGGGACGAGG +
Preference number: 4 (lower is better)
Translates to: TRPHTLERLEGGGSAHPLLSRAS*GPRGTR
Trigger: CCTCGTCCCCCTGGGTCCTCATGACGCCCTGCTCAG...CAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR TCA 90 bp CAAAGAACTCTTCGCCCTCGAACATCTCCACCGTGTCAGAGGGCTCGGGGCCCCCTGAGCAGGGCGTCATaGGGACCCAGGGGGACGAGG +
Preference number: 4 (lower is better)
Translates to: QRTLRPRTSPPCQRARGPLSRAS*GPRGTR
Trigger: CCTCGTCCCCCTGGGTCCTCATGACGCCCTGCTCAG...GGGGCCCCGAGCCCTCTGACACGGTGGAGATGTTCGAGGGCGAAGAGTTCTTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR TCA 90 bp ACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCTGAGCAGGGCGTCATaGGGACCCAGGGGGACGAGG +
Preference number: 4 (lower is better)
Translates to: TGTRPHTLERLEGGGSAHLSRAS*GPRGTR
Trigger: CCTCGTCCCCCTGGGTCCTCATGACGCCCTGCTCAG...ATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR TCA 90 bp TTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCGGGCCTGCGGTGGGGTaGAGAGCAGCCACAGCCCCA +
Preference number: 4 (lower is better)
Translates to: LLLTGTRPHTLERLEGGGGPAVG*RAATAP
Trigger: TGGGGCTGTGGCTGCTCTTCACCCCACCGCAGGCCC...GCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR TCA 90 bp TGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTTGGGGCACCTGGCAGTaGGCCCAGAGCCGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: CCSQGPVPTHWRDLKVGAWGTWQ*AQSRWG
Trigger: ACCCCAGCGGCTCTGGGCTCACTGCCAGGTGCCCCA...AGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR TCA 90 bp CCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGAGGCAGCTGCACGGTaGCCGGTTGGAGGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: PVPTHWRDLKVGALPIHWEAAAR*PVGGSW
Trigger: CCAGCTTCCTCCAACCGGTCACCGTGCAGCTGCCTC...CCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR TCA 90 bp ACCCGAGGAGCACAGCAGTGTCCCCTCCGGTGGCACCAGGCAGGCATTGGACACCGGGACCCCAATTCGTaGGCCCCGGAGGAAACCTCT +
Preference number: 4 (lower is better)
Translates to: TRGAQQCPLRWHQAGIGHRDPNS*APEETS
Trigger: AGAGGTTTCCTCCGGGGCTCACGAATTGGGGTCCCG...GTGTCCAATGCCTGCCTGGTGCCACCGGAGGGGACACTGCTGTGCTCCTCGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524486.5
CDS-3UTR TCA 90 bp CTCGGACCCTCGAAGTCTCGGCAGCTTGATGGGCAGAGTGGCCATCCACAGGGCACCTTGTGGTCACCCTaGACCCCGGAGGCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: LGPSKSRQLDGQSGHPQGTLWSP*TPEAWV
Trigger: GACCCAGGCCTCCGGGGTTCAGGGTGACCACAAGGT...GCCCTGTGGATGGCCACTCTGCCCATCAAGCTGCCGAGACTTCGAGGGTCCGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
CDS-3UTR GCA 90 bp CCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGAGAGATCGAGGCGCTaGAGGGTGGATAGGGCCCCC +
Preference number: 4 (lower is better)
Translates to: PVPTHWRDLKVGALPIHWERSRR*RVDRAP
Trigger: GGGGGCCCTATCCACCCTGCAGCGCCTCGATCTCTC...CCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
CDS-3UTR GCA 90 bp TGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTGCTCCCGCTGGGAACTaGAGGCGGACGCCACAGGCC +
Preference number: 4 (lower is better)
Translates to: CCSQGPVPTHWRDLKVGAAPAGN*RRTPQA
Trigger: GGCCTGTGGCGTCCGCCTGCAGTTCCCAGCGGGAGC...AGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp TGGGGGCCAAGCCCATGCGTCGGATGCTGTCCTGGTACTTGCGGCGGCCGAGCTGTCATCCCAGGTGGCTaGAGGAGGGGCCCAGTACAA +
Preference number: 4 (lower is better)
Translates to: WGPSPCVGCCPGTCGGRAVIPGG*RRGPVQ
Trigger: TTGTACTGGGCCCCTCCTGCAGCCACCTGGGATGAC...AGCTCGGCCGCCGCAAGTACCAGGACAGCATCCGACGCATGGGCTTGGCCCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp GGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCAGGGTCCCGGCGCCGCTaGAGAGCGATGAGGTTCACA +
Preference number: 4 (lower is better)
Translates to: GTRPHTLERLEGGGSAHPGSRRR*RAMRFT
Trigger: TGTGAACCTCATCGCTCTGCAGCGGCGCCGGGACCC...TGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp CAGCCACACTCAGCAGGTTGCTCTGCGTCAGAAAGCCGGTCTCGGCATCTCCCACACTGCAGCAGGACCTaGTCAGGGTCCCGGCGCCGC +
Preference number: 4 (lower is better)
Translates to: QPHSAGCSASESRSRHLPHCSRT*SGSRRR
Trigger: GCGGCGCCGGGACCCTGAGCAGGTCCTGCTGCAGTG...TGGGAGATGCCGAGACCGGCTTTCTGACGCAGAGCAACCTGCTGAGTGTGGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp ACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCATCCACAGGGCGTCTaGGCCCTTCCTCTGCCGGGC +
Preference number: 4 (lower is better)
Translates to: TGTRPHTLERLEGGGSAHHPQGV*ALPLPG
Trigger: GCCCGGCAGAGGAAGGGCGCAGACGCCCTGTGGATG...ATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp TGGGGGCCAAGCCCATGCGTCGGATGCTGTCCTGGTACTTGCGGCGGCCGAGCTTCCCAGATTCAAGGGTaGCAAGGAGAGGCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: WGPSPCVGCCPGTCGGRASQIQG*QGEASP
Trigger: GGGGCTGGCCTCTCCTTGGCACCCTTGAATCTGGGA...AGCTCGGCCGCCGCAAGTACCAGGACAGCATCCGACGCATGGGCTTGGCCCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp AGGTTGCTCTGCGTCAGAAAGCCGGTCTCGGCATCTCCCAGATTCAAGGGTGCCCCCACAGCCCCTGGCTaGCCAGCCTGGCGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: RLLCVRKPVSASPRFKGAPTAPG*PAWRSA
Trigger: GGCTGAGCGCCAGGCTGGGCAGCCAGGGGCTGTGGG...GGCACCCTTGAATCTGGGAGATGCCGAGACCGGCTTTCTGACGCAGAGCAACCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CCA 90 bp AGGGCCTGCAGCTCTCGGCCAGCCATGCGCACCACCTGCATGGAGACTCGACGAGGAAAGGCAGCGCCCTaGACCCTGCGTCCGAATCCT +
Preference number: 4 (lower is better)
Translates to: RACSSRPAMRTTCMETRRGKAAP*TLRPNP
Trigger: AGGATTCGGACGCAGGGTCCAGGGCGCTGCCTTTCC...TCGTCGAGTCTCCATGCAGGTGGTGCGCATGGCTGGCCGAGAGCTGCAGGCCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
CDS-3UTR CCA 90 bp CGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGGAGCCGGGTGAGGAGTaGAAGGCGGGCCAAGTCAGC +
Preference number: 4 (lower is better)
Translates to: RPHTLERLEGGGSAHPLGEPGEE*KAGQVS
Trigger: GCTGACTTGGCCCGCCTTCCACTCCTCACCCGGCTC...CCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
CDS-3UTR CCA 90 bp CGGATGCTGTCCTGGTACTTGCGGCGGCCGAGCTCCAAGACTGCGCGCACCTCTCAGTGTCCCCTCCGGTaGCACCAGGCAGGCATTGGA +
Preference number: 4 (lower is better)
Translates to: RMLSWYLRRPSSKTARTSQCPLR*HQAGIG
Trigger: TCCAATGCCTGCCTGGTGCCACCGGAGGGGACACTG...AGAGGTGCGCGCAGTCTTGGAGCTCGGCCGCCGCAAGTACCAGGACAGCATCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CCA 90 bp CACAGCAGTGTCCCCTCCGGTGGCACCAGGCAGGCATTGGACACAGGGCGGGAACCGGTTGGAGGAAGCTaGGGGGACCGCTCTGTGACA +
Preference number: 4 (lower is better)
Translates to: HSSVPSGGTRQALDTGREPVGGS*GDRSVT
Trigger: TGTCACAGAGCGGTCCCCCCAGCTTCCTCCAACCGG...TTCCCGCCCTGTGTCCAATGCCTGCCTGGTGCCACCGGAGGGGACACTGCTGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
CDS-3UTR CCA 90 bp CCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGCAGCCGCCGAAGGGTaGCGTCCACCTTGTTTCGGG +
Preference number: 4 (lower is better)
Translates to: PVPTHWRDLKVGALPIHWAAAEG*RPPCFG
Trigger: CCCGAAACAAGGTGGACGCCACCCTTCGGCGGCTGC...CCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CCA 90 bp CACACAGTCAGGGCGGTCAGCATCCACGTCGATGCCGCGCTCGAAGGCCGCAAAGCAGCCGCCGAAGGGTaGCGTCCACCTTGTTTCGGG +
Preference number: 4 (lower is better)
Translates to: HTVRAVSIHVDAALEGRKAAAEG*RPPCFG
Trigger: CCCGAAACAAGGTGGACGCCACCCTTCGGCGGCTGC...TTTGCGGCCTTCGAGCGCGGCATCGACGTGGATGCTGACCGCCCTGACTGTGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CCA 90 bp GCATCCACGTCGATGCCGCGCTCGAAGGCCGCAAAGAACTCTTCGCCCTCGAACGTGCAGGGCCACGGCTaGCCAGTCCAGACCCAGACG +
Preference number: 4 (lower is better)
Translates to: ASTSMPRSKAAKNSSPSNVQGHG*PVQTQT
Trigger: CGTCTGGGTCTGGACTGGCCAGCCGTGGCCCTGCAC...GTTCGAGGGCGAAGAGTTCTTTGCGGCCTTCGAGCGCGGCATCGACGTGGATGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CCA 90 bp GAGGAGTGGAAGGCGGGCCAAGTCAGCTGGCACAGAGGCCAGGAGGTTGCTGTGTCCAGTTCGGTCCACTaGGGAGGGTGGTGCACCGCG +
Preference number: 4 (lower is better)
Translates to: EEWKAGQVSWHRGQEVAVSSSVH*GGWCTA
Trigger: CGCGGTGCACCACCCTCCCCAGTGGACCGAACTGGA...CACAGCAACCTCCTGGCCTCTGTGCCAGCTGACTTGGCCCGCCTTCCACTCCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524486.5
CDS-3UTR CCA 90 bp CAGAGCGGGGTCCTTGGGGGCCAAGCCCATGCGTCGGATGCTGTCCTGGTACTTCAGGCCATCTGGGCCTaGGCTGCAGAGTGGGGGAGA +
Preference number: 4 (lower is better)
Translates to: QSGVLGGQAHASDAVLVLQAIWA*AAEWGR
Trigger: TCTCCCCCACTCTGCAGCCCAGGCCCAGATGGCCTG...AAGTACCAGGACAGCATCCGACGCATGGGCTTGGCCCCCAAGGACCCCGCTCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
CDS-3UTR TCA 90 bp CCTCAGGTCGAGCCGGGTGAGGAGTGGAAGGCGGGCCAAGTCAGCTGGCACAGAGTGTCTCCAGGCTGTTaGAGCTCAGGTCCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: PQVEPGEEWKAGQVSWHRVSPGC*SSGPGG
Trigger: CCCACCTGGACCTGAGCTTCAACAGCCTGGAGACAC...TCTGTGCCAGCTGACTTGGCCCGCCTTCCACTCCTCACCCGGCTCGACCTGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
CDS-3UTR TCA 90 bp CCGCTGCAGAGCGATGAGGTTCACACGGTGCAGCCGCAGCCGCTCCCAGGCCTTTCAGAGAGGCAGTTGTaGGACAGCAAGAGCGCACCC +
Preference number: 4 (lower is better)
Translates to: PLQSDEVHTVQPQPLPGLSERQL*DSKSAP
Trigger: GGGTGCGCTCTTGCTGTCTCACAACTGCCTCTCTGA...AAGGCCTGGGAGCGGCTGCGGCTGCACCGTGTGAACCTCATCGCTCTGCAGCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
CDS-3UTR TCA 90 bp GAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGGCCAGCTCAGGTCGAGCCGGGTaGGGAGTGGAAGGCGGGCCA +
Preference number: 4 (lower is better)
Translates to: ERLEGGGSAHPLGNIWASSGRAG*GVEGGP
Trigger: TGGCCCGCCTTCCACTCCTCACCCGGCTCGACCTGA...GCTGGCCCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
CDS-3UTR TCA 90 bp GATGCCGCGCTCGAAGGCCGCAAAGAACTCTTCGCCCTCGAACATCTCCACCGTGAGGGCTGCCACTGGTaGACTCGGGGCGTCTGGCGA +
Preference number: 4 (lower is better)
Translates to: DAALEGRKELFALEHLHREGCHW*TRGVWR
Trigger: TCGCCAGACGCCCCGAGTTCACCAGTGGCAGCCCTC...ACGGTGGAGATGTTCGAGGGCGAAGAGTTCTTTGCGGCCTTCGAGCGCGGCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR TCA 90 bp AGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGGCCAGCCGCCGATAGCGGATGGTaGTGGGGGTGGCGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: RDLKVGALPIHWGISGPAADSGW*WGWRWL
Trigger: GAGCCACCGCCACCCCCATCACCATCCGCTATCGGC...GGCTGGCCCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR TCA 90 bp CATCCCGGAACTCGTGCCGGATGCGCTGCACCTCCCGGTAGGACACCCCCAGGTACTTTGACCCCAGGATaGCCCGAGGAGCACAGCAGT +
Preference number: 4 (lower is better)
Translates to: HPGTRAGCAAPPGRTPPGTLTPG*PEEHSS
Trigger: ACTGCTGTGCTCCTCGGGTCATCCTGGGGTCAAAGT...ACCTGGGGGTGTCCTACCGGGAGGTGCAGCGCATCCGGCACGAGTTCCGGGATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp AGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGGCCAGCCCACAGGTGCAGCAGCTaGTGGCAGCCCCCGGGGTAC +
Preference number: 4 (lower is better)
Translates to: RDLKVGALPIHWGISGPAHRCSS*WQPPGY
Trigger: GTACCCCGGGGGCTGCCAGCAGCTGCTGCACCTGTG...GGCTGGCCCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
CDS-3UTR GCA 90 bp GGCCAGCCATGCGCACCACCTGCATGGAGACTCGACGAGGCTCCTCAGTGGCCCCGCAAGAATTCCACCTaGAGCAGCTGCAGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: GQPCAPPAWRLDEAPQWPRKNST*SSCRGC
Trigger: GCAGCCTCTGCAGCTGCTGCAGGTGGAATTCTTGCG...GGGCCACTGAGGAGCCTCGTCGAGTCTCCATGCAGGTGGTGCGCATGGCTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
CDS-3UTR GCA 90 bp TCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCCCCAGACCTCGCATCTaGAGGACACAGGCCGGCAGT +
Preference number: 4 (lower is better)
Translates to: SQGPVPTHWRDLKVGALPPRPRI*RTQAGS
Trigger: ACTGCCGGCCTGTGTCCTGCAGATGCGAGGTCTGGG...GGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGA
64% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
CDS-3UTR GCA 90 bp ACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGAGAGATCGAGGCGCTaGAGGGTGGATAGGGCCCCC +
Preference number: 4 (lower is better)
Translates to: TRPHTLERLEGGGSAHPLERSRR*RVDRAP
Trigger: GGGGGCCCTATCCACCCTGCAGCGCCTCGATCTCTC...CAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
CDS-3UTR GCA 90 bp AGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGGCCAGCCTAGCTCCCGCTGGGAACTaGAGGCGGACGCCACAGGCC +
Preference number: 4 (lower is better)
Translates to: RLEGGGSAHPLGNIWASLAPAGN*RRTPQA
Trigger: GGCCTGTGGCGTCCGCCTGCAGTTCCCAGCGGGAGC...TAGGCTGGCCCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp TCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCCCAGAGCCGCTGGGGTaGCTCTTCCTCCAGGTAGGT +
Preference number: 4 (lower is better)
Translates to: SQGPVPTHWRDLKVGALPPEPLG*LFLQVG
Trigger: ACCTACCTGGAGGAAGAGGCACCCCAGCGGCTCTGG...GGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp ACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATGAGGGCAGAGGCAGCTaGACGGTGACCGGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: TGTRPHTLERLEGGGSAHEGRGS*TVTGWR
Trigger: CCTCCAACCGGTCACCGTGCAGCTGCCTCTGCCCTC...ATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp ACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGAGGGCAGAGGCAGCTaGACGGTGACCGGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: TRPHTLERLEGGGSAHPLEGRGS*TVTGWR
Trigger: CCTCCAACCGGTCACCGTGCAGCTGCCTCTGCCCTC...CAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp GGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCAGCCCAGTACAACAGGTaGAGGCGGGAGCGGTCCAGA +
Preference number: 4 (lower is better)
Translates to: GTRPHTLERLEGGGSAHPAQYNR*RRERSR
Trigger: TCTGGACCGCTCCCGCCTGCACCTGTTGTACTGGGC...TGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp TCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCGCCCAGTACAACAGGTaGAGGCGGGAGCGGTCCAGA +
Preference number: 4 (lower is better)
Translates to: SQGPVPTHWRDLKVGALPAQYNR*RRERSR
Trigger: TCTGGACCGCTCCCGCCTGCACCTGTTGTACTGGGC...GGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp GGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACATGAGGTTCACACGGTaGAGCCGCAGCCGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: GPVPTHWRDLKVGALPIHMRFTR*SRSRSQ
Trigger: CTGGGAGCGGCTGCGGCTGCACCGTGTGAACCTCAT...GTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp CACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGGCACTGCAGCAGGACCTaGTCAGGGTCCCGGCGCCGC +
Preference number: 4 (lower is better)
Translates to: HWRDLKVGALPIHWGISGHCSRT*SGSRRR
Trigger: GCGGCGCCGGGACCCTGAGCAGGTCCTGCTGCAGTG...CCCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp CCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGCAGCATCCACGTCGATaGCGCGCTCGAAGGCCGCAA +
Preference number: 4 (lower is better)
Translates to: PVPTHWRDLKVGALPIHWQHPRR*RARRPQ
Trigger: TTGCGGCCTTCGAGCGCGGCATCGACGTGGATGCTG...CCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp GAGGAGTGGAAGGCGGGCCAAGTCAGCTGGCACAGAGGCCAGGAGGTTGCTGTGCAGCATCCACGTCGATaGCGCGCTCGAAGGCCGCAA +
Preference number: 4 (lower is better)
Translates to: EEWKAGQVSWHRGQEVAVQHPRR*RARRPQ
Trigger: TTGCGGCCTTCGAGCGCGGCATCGACGTGGATGCTG...CACAGCAACCTCCTGGCCTCTGTGCCAGCTGACTTGGCCCGCCTTCCACTCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
CDS-3UTR GCA 90 bp CTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGGCCCATCCACAGGGCGTCTaGGCCCTTCCTCTGCCGGGC +
Preference number: 4 (lower is better)
Translates to: LERLEGGGSAHPLGNIWAHPQGV*ALPLPG
Trigger: GCCCGGCAGAGGAAGGGCGCAGACGCCCTGTGGATG...GGCCCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp AGCAGTGTCCCCTCCGGTGGCACCAGGCAGGCATTGGACACAGGGCGGGAAACCTCCCAGATTCAAGGGTaGCAAGGAGAGGCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: SSVPSGGTRQALDTGRETSQIQG*QGEASP
Trigger: GGGGCTGGCCTCTCCTTGGCACCCTTGAATCTGGGA...GGTTTCCCGCCCTGTGTCCAATGCCTGCCTGGTGCCACCGGAGGGGACACTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
CDS-3UTR GCA 90 bp CGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGTCATCCCGGAACTCGTaGCGGATGCGCTGCACCTCC +
Preference number: 4 (lower is better)
Translates to: RPHTLERLEGGGSAHPLGSSRNS*RMRCTS
Trigger: GGAGGTGCAGCGCATCCGGCACGAGTTCCGGGATGA...CCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp GTCCCCTCCGGTGGCACCAGGCAGGCATTGGACACAGGGCGGGAAACCACAAGGTGCTGTCCTGGTACTTaGGGCGGCCGAGCTCCAAGA +
Preference number: 4 (lower is better)
Translates to: VPSGGTRQALDTGRETTRCCPGT*GGRAPR
Trigger: TCTTGGAGCTCGGCCGCCGCAAGTACCAGGACAGCA...CCTTGTGGTTTCCCGCCCTGTGTCCAATGCCTGCCTGGTGCCACCGGAGGGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
CDS-3UTR GCA 90 bp CACACAGTCAGGGCGGTCAGCATCCACGTCGATGCCGCGCTCGAAGGCCGCAAATGGGGGCCAAGCCCATaGGTCGGATGCTGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: HTVRAVSIHVDAALEGRKWGPSP*VGCCPG
Trigger: ACCAGGACAGCATCCGACGCATGGGCTTGGCCCCCA...TTTGCGGCCTTCGAGCGCGGCATCGACGTGGATGCTGACCGCCCTGACTGTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CCA 90 bp TCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCCCCACCGACGGTCCTTaGAGGCCAGACATGTCCCAG +
Preference number: 4 (lower is better)
Translates to: SQGPVPTHWRDLKVGALPPTDGP*RPDMSQ
Trigger: CTGGGACATGTCTGGCCTCCAAGGACCGTCGGTGGG...GGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGA
64% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
CDS-3UTR CCA 90 bp TCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCGGAAAGGCAGCGCCCTaGACCCTGCGTCCGAATCCT +
Preference number: 4 (lower is better)
Translates to: SQGPVPTHWRDLKVGALPGKAAP*TLRPNP
Trigger: AGGATTCGGACGCAGGGTCCAGGGCGCTGCCTTTCC...GGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
CDS-3UTR CCA 90 bp CTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGGCCGCAGCTGGGCCAGGGTaGCCTCCAGCAGCTGAGGGT +
Preference number: 4 (lower is better)
Translates to: LERLEGGGSAHPLGNIWAAAGPG*PPAAEG
Trigger: ACCCTCAGCTGCTGGAGGCCACCCTGGCCCAGCTGC...GGCCCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
CDS-3UTR CCA 90 bp CTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGGCCCGAGGCGCTGCAGGGTaGATAGGGCCCCCAGTGCTG +
Preference number: 4 (lower is better)
Translates to: LERLEGGGSAHPLGNIWARGAAG*IGPPVL
Trigger: CAGCACTGGGGGCCCTATCCACCCTGCAGCGCCTCG...GGCCCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
CDS-3UTR CCA 90 bp GGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACGCGGGCCAAGTCAGCTaGCACAGAGGCCAGGAGGTT +
Preference number: 4 (lower is better)
Translates to: GPVPTHWRDLKVGALPIHAGQVS*HRGQEV
Trigger: AACCTCCTGGCCTCTGTGCCAGCTGACTTGGCCCGC...GTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
CDS-3UTR CCA 90 bp CATCCAGATCATCCCGGAACTCGTGCCGGATGCGCTGCACCTCCCGGTAGGACAGAGCCGGGTGAGGAGTaGAAGGCGGGCCAAGTCAGC +
Preference number: 4 (lower is better)
Translates to: HPDHPGTRAGCAAPPGRTEPGEE*KAGQVS
Trigger: GCTGACTTGGCCCGCCTTCCACTCCTCACCCGGCTC...TGTCCTACCGGGAGGTGCAGCGCATCCGGCACGAGTTCCGGGATGATCTGGATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
CDS-3UTR CCA 90 bp TTTTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGCAGGGGGACGAGGCCTaGCTCCGGCAGCAGCAGCCG +
Preference number: 4 (lower is better)
Translates to: FCCSQGPVPTHWRDLKVGQGDEA*LRQQQP
Trigger: CGGCTGCTGCTGCCGGAGCCAGGCCTCGTCCCCCTG...CCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CCA 90 bp CCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGTGGAAGGCCACCCCATaGGGCTGCAGCTCCAGCACA +
Preference number: 4 (lower is better)
Translates to: PVPTHWRDLKVGALPIHWWKATP*GCSSST
Trigger: TGTGCTGGAGCTGCAGCCCCATGGGGTGGCCTTCCA...CCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CCA 90 bp GGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGAAGGCCACCCCATaGGGCTGCAGCTCCAGCACA +
Preference number: 4 (lower is better)
Translates to: GPVPTHWRDLKVGALPIHWKATP*GCSSST
Trigger: TGTGCTGGAGCTGCAGCCCCATGGGGTGGCCTTCCA...GTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CCA 90 bp AGCAGTGTCCCCTCCGGTGGCACCAGGCAGGCATTGGACACAGGGCGGGAAACCGCACCAGGCAGGCATTaGACACAGGGCGGGAAACCA +
Preference number: 4 (lower is better)
Translates to: SSVPSGGTRQALDTGRETAPGRH*TQGGKP
Trigger: TGGTTTCCCGCCCTGTGTCCAATGCCTGCCTGGTGC...GGTTTCCCGCCCTGTGTCCAATGCCTGCCTGGTGCCACCGGAGGGGACACTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
CDS-3UTR CCA 90 bp CCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGCAGTGTCCCCTCCGGTaGCACCAGGCAGGCATTGGA +
Preference number: 4 (lower is better)
Translates to: PVPTHWRDLKVGALPIHWQCPLR*HQAGIG
Trigger: TCCAATGCCTGCCTGGTGCCACCGGAGGGGACACTG...CCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CCA 90 bp CGGATGCTGTCCTGGTACTTGCGGCGGCCGAGCTCCAAGACTGCGCGCACCTCTAAGCGTGCGTACAGGTaGGTGAGCTCCAGGACCACC +
Preference number: 4 (lower is better)
Translates to: RMLSWYLRRPSSKTARTSKRAYR*VSSRTT
Trigger: GGTGGTCCTGGAGCTCACCCACCTGTACGCACGCTT...AGAGGTGCGCGCAGTCTTGGAGCTCGGCCGCCGCAAGTACCAGGACAGCATCCG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000531286.5
CDS-3UTR CCA 90 bp CTCGGACCCTCGAAGTCTCGGCAGCTTGATGGGCAGAGTGGCCATCCACAGGGCGTAAGGGTGAGGGCCTaGGGCGTGAGCCATTGGGCA +
Preference number: 4 (lower is better)
Translates to: LGPSKSRQLDGQSGHPQGVRVRA*GVSHWA
Trigger: TGCCCAATGGCTCACGCCCCAGGCCCTCACCCTTAC...GCCCTGTGGATGGCCACTCTGCCCATCAAGCTGCCGAGACTTCGAGGGTCCGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524486.5
CDS-3UTR CCA 90 bp CTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGGCCGGAATGGGACCGCCATaGCTCGCAGGAGCACCGGGC +
Preference number: 4 (lower is better)
Translates to: LERLEGGGSAHPLGNIWAGMGPP*LAGAPG
Trigger: GCCCGGTGCTCCTGCGAGCCATGGCGGTCCCATTCC...GGCCCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524486.5
3UTR CAA 72 bp ATCTGCAGGACACAGGCCGGCAGTGTCTCCAGGCTGTaGAAGCTCAGGTCCAGGTGGGCCAGATGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: ICRTQAGSVSRL*KLRSRWARWAR
Trigger: CCTGGCCCATCTGGCCCACCTGGACCTGAGCTTCAACAGCCTGGAGACACTGCCGGCCTGTGTCCTGCAGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
3UTR CAA 72 bp CACAGCAGTGTCCCCTCCGGTGGCACCAGGCAGGCATaGGACACAGGGCGGGAAACCACAAGGAACCAGGAG +
Preference number: 4 (lower is better)
Translates to: HSSVPSGGTRQA*DTGRETTRNQE
Trigger: CTCCTGGTTCCTTGTGGTTTCCCGCCCTGTGTCCAATGCCTGCCTGGTGCCACCGGAGGGGACACTGCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
CDS-3UTR TCA 90 bp TCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCGTGTCTCCAGGCTGTTaGAGCTCAGGTCCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: SQGPVPTHWRDLKVGALPVSPGC*SSGPGG
Trigger: CCCACCTGGACCTGAGCTTCAACAGCCTGGAGACAC...GGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
CDS-3UTR TCA 90 bp CCTCAGGTCGAGCCGGGTGAGGAGTGGAAGGCGGGCCAAGTCAGCTGGCACAGATCAGAGAGGCAGTTGTaGGACAGCAAGAGCGCACCC +
Preference number: 4 (lower is better)
Translates to: PQVEPGEEWKAGQVSWHRSERQL*DSKSAP
Trigger: GGGTGCGCTCTTGCTGTCTCACAACTGCCTCTCTGA...TCTGTGCCAGCTGACTTGGCCCGCCTTCCACTCCTCACCCGGCTCGACCTGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
CDS-3UTR TCA 90 bp CACAGCAGTGTCCCCTCCGGTGGCACCAGGCAGGCATTGGACACAGGGCGGGAAGTGTCCAGCAGATTCTaGGAGAGATCGAGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: HSSVPSGGTRQALDTGREVSSRF*ERSRRC
Trigger: GCAGCGCCTCGATCTCTCTCAGAATCTGCTGGACAC...TTCCCGCCCTGTGTCCAATGCCTGCCTGGTGCCACCGGAGGGGACACTGCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
CDS-3UTR TCA 90 bp GCCAAGCCCATGCGTCGGATGCTGTCCTGGTACTTGCGGCGGCCGAGCTCCAAGGTGTCCAGCAGATTCTaGGAGAGATCGAGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: AKPMRRMLSWYLRRPSSKVSSRF*ERSRRC
Trigger: GCAGCGCCTCGATCTCTCTCAGAATCTGCTGGACAC...CTTGGAGCTCGGCCGCCGCAAGTACCAGGACAGCATCCGACGCATGGGCTTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
CDS-3UTR TCA 90 bp GTCCCCTCCGGTGGCACCAGGCAGGCATTGGACACAGGGCGGGAAACCACAAGGGTCACTGAGCAGCCTTaGGGGGTCACAGGAAAGCTG +
Preference number: 4 (lower is better)
Translates to: VPSGGTRQALDTGRETTRVTEQP*GVTGKL
Trigger: CAGCTTTCCTGTGACCCCTCAAGGCTGCTCAGTGAC...CCTTGTGGTTTCCCGCCCTGTGTCCAATGCCTGCCTGGTGCCACCGGAGGGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
CDS-3UTR TCA 90 bp CTGCTCATCCAGATCATCCCGGAACTCGTGCCGGATGCGCTGCACCTCCCGGTAGCTCCAGCACATGGCTaGGCAGGGCGTCATGAGGAC +
Preference number: 4 (lower is better)
Translates to: LLIQIIPELVPDALHLPVAPAHG*AGRHED
Trigger: GTCCTCATGACGCCCTGCTCAGCCATGTGCTGGAGC...TACCGGGAGGTGCAGCGCATCCGGCACGAGTTCCGGGATGATCTGGATGAGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR TCA 90 bp ACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGGGGCCTGCGGTGGGGTaGAGAGCAGCCACAGCCCCA +
Preference number: 4 (lower is better)
Translates to: TLERLEGGGSAHPLGNIWGPAVG*RAATAP
Trigger: TGGGGCTGTGGCTGCTCTTCACCCCACCGCAGGCCC...CCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR TCA 90 bp GTTTTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGGCCTGCGGTGGGGTaGAGAGCAGCCACAGCCCCA +
Preference number: 4 (lower is better)
Translates to: VLLLTGTRPHTLERLEGGGPAVG*RAATAP
Trigger: TGGGGCTGTGGCTGCTCTTCACCCCACCGCAGGCCC...CCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAAAAC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 22 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR TCA 90 bp ACCCGAGGAGCACAGCAGTGTCCCCTCCGGTGGCACCAGGCAGGCATTGGACACACTTTGACCCCAGGATaGCCCGAGGAGCACAGCAGT +
Preference number: 4 (lower is better)
Translates to: TRGAQQCPLRWHQAGIGHTLTPG*PEEHSS
Trigger: ACTGCTGTGCTCCTCGGGTCATCCTGGGGTCAAAGT...GTGTCCAATGCCTGCCTGGTGCCACCGGAGGGGACACTGCTGTGCTCCTCGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
CDS-3UTR TCA 90 bp TGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTGAGGCAGCTGCACGGTaGCCGGTTGGAGGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: CCSQGPVPTHWRDLKVGAEAAAR*PVGGSW
Trigger: CCAGCTTCCTCCAACCGGTCACCGTGCAGCTGCCTC...AGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR TCA 90 bp CTCGGACCCTCGAAGTCTCGGCAGCTTGATGGGCAGAGTGGCCATCCACAGGGCGGACCACCTGAGCTGTaGTGTCATCCCAGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: LGPSKSRQLDGQSGHPQGGPPEL*CHPRWL
Trigger: CAGCCACCTGGGATGACATCACAGCTCAGGTGGTCC...GCCCTGTGGATGGCCACTCTGCCCATCAAGCTGCCGAGACTTCGAGGGTCCGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR TCA 90 bp CTCGGGCACCCGCACAGGCACCGCGCCACGGTAGAAGGACACCTCCTTCACATTGGACCACCTGAGCTGTaGTGTCATCCCAGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: LGHPHRHRATVEGHLLHIGPPEL*CHPRWL
Trigger: CAGCCACCTGGGATGACATCACAGCTCAGGTGGTCC...AATGTGAAGGAGGTGTCCTTCTACCGTGGCGCGGTGCCTGTGCGGGTGCCCGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531286.5
CDS-3UTR TCA 90 bp CCGCTGCAGAGCGATGAGGTTCACACGGTGCAGCCGCAGCCGCTCCCAGGCCTTACCAGGAGAAGTGTGTaGCCTGGAAGCGTGCGTACA +
Preference number: 4 (lower is better)
Translates to: PLQSDEVHTVQPQPLPGLTRRSV*PGSVRT
Trigger: TGTACGCACGCTTCCAGGTCACACACTTCTCCTGGT...AAGGCCTGGGAGCGGCTGCGGCTGCACCGTGTGAACCTCATCGCTCTGCAGCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524486.5
CDS-3UTR TCA 90 bp GCCCTCGAACATCTCCACCGTGTCAGAGGGCTCGGGGCCCCGGTACCGCTCCAGCAGGAGAAGAGCATGTaGCGGATCTGCTCATCCAGA +
Preference number: 4 (lower is better)
Translates to: ALEHLHRVRGLGAPVPLQQEKSM*RICSSR
Trigger: TCTGGATGAGCAGATCCGTCACATGCTCTTCTCCTG...CTGGAGCGGTACCGGGGCCCCGAGCCCTCTGACACGGTGGAGATGTTCGAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR TCA 90 bp GATGCTGTCCTGGTACTTGCGGCGGCCGAGCTCCAAGACTGCGCGCACCTCTTCCACACTGGAGAGACTTaGAGGTGGGGGCTCTGCCCA +
Preference number: 4 (lower is better)
Translates to: DAVLVLAAAELQDCAHLFHTGET*RWGLCP
Trigger: TGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTG...GAAGAGGTGCGCGCAGTCTTGGAGCTCGGCCGCCGCAAGTACCAGGACAGCATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR TCA 90 bp GCTCGAAGGCCGCAAAGAACTCTTCGCCCTCGAACATCTCCACCGTGTCAGAGGTTACCAGGAAGGCCGTaGCCCTCCCCTACCGCGGGG +
Preference number: 4 (lower is better)
Translates to: ARRPQRTLRPRTSPPCQRLPGRP*PSPTAG
Trigger: CCCCGCGGTAGGGGAGGGTCACGGCCTTCCTGGTAA...CCTCTGACACGGTGGAGATGTTCGAGGGCGAAGAGTTCTTTGCGGCCTTCGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524486.5
CDS-3UTR GCA 90 bp TGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCCAAGCTCAGCCGGTTaGCGCCCAGGAAAGGCAGCG +
Preference number: 4 (lower is better)
Translates to: CCSQGPVPTHWRDLKVGAPSSAG*RPGKAA
Trigger: CGCTGCCTTTCCTGGGCGGCAACCGGCTGAGCTTGG...AGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
CDS-3UTR GCA 90 bp TGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGGCCACACAGGTGCAGCAGCTaGTGGCAGCCCCCGGGGTAC +
Preference number: 4 (lower is better)
Translates to: WRDLKVGALPIHWGISGPHRCSS*WQPPGY
Trigger: GTACCCCGGGGGCTGCCAGCAGCTGCTGCACCTGTG...TGGCCCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
CDS-3UTR GCA 90 bp GTCCCCTCCGGTGGCACCAGGCAGGCATTGGACACAGGGCGGGAAACCACAAGGCGCAAGAATTCCACCTaGAGCAGCTGCAGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: VPSGGTRQALDTGRETTRRKNST*SSCRGC
Trigger: GCAGCCTCTGCAGCTGCTGCAGGTGGAATTCTTGCG...CCTTGTGGTTTCCCGCCCTGTGTCCAATGCCTGCCTGGTGCCACCGGAGGGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
CDS-3UTR GCA 90 bp CTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGGCCGAGAGATCGAGGCGCTaGAGGGTGGATAGGGCCCCC +
Preference number: 4 (lower is better)
Translates to: LERLEGGGSAHPLGNIWAERSRR*RVDRAP
Trigger: GGGGGCCCTATCCACCCTGCAGCGCCTCGATCTCTC...GGCCCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
CDS-3UTR GCA 90 bp AGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGGCCAGCCTAGAGGCTGGGAGGCTCTaGAGCCGGTTGGAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: RLEGGGSAHPLGNIWASLEAGRL*SRLEAR
Trigger: CCTGGCCTCCAACCGGCTGCAGAGCCTCCCAGCCTC...TAGGCTGGCCCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
CDS-3UTR GCA 90 bp CGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGGCCAGGAGGTTGCTGTaGAGGACAAGGAGCCGCAAG +
Preference number: 4 (lower is better)
Translates to: RPHTLERLEGGGSAHPLGARRLL*RTRSRK
Trigger: CTTGCGGCTCCTTGTCCTGCACAGCAACCTCCTGGC...CCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
CDS-3UTR GCA 90 bp CCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGCCAGGAGGTTGCTGTaGAGGACAAGGAGCCGCAAG +
Preference number: 4 (lower is better)
Translates to: PVPTHWRDLKVGALPIHWARRLL*RTRSRK
Trigger: CTTGCGGCTCCTTGTCCTGCACAGCAACCTCCTGGC...CCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
CDS-3UTR GCA 90 bp CGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGCAGAGGCCAGGAGGTTaGTGTGCAGGACAAGGAGCC +
Preference number: 4 (lower is better)
Translates to: RPHTLERLEGGGSAHPLGQRPGG*CAGQGA
Trigger: GGCTCCTTGTCCTGCACAGCAACCTCCTGGCCTCTG...CCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
CDS-3UTR GCA 90 bp GATCTGCTCATCCAGATCATCCCGGAACTCGTGCCGGATGCGCTGCACCTCCCGCCAGAGCCGCTGGGGTaGCTCTTCCTCCAGGTAGGT +
Preference number: 4 (lower is better)
Translates to: DLLIQIIPELVPDALHLPPEPLG*LFLQVG
Trigger: ACCTACCTGGAGGAAGAGGCACCCCAGCGGCTCTGG...CGGGAGGTGCAGCGCATCCGGCACGAGTTCCGGGATGATCTGGATGAGCAGATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp ATGCTGTCCTGGTACTTGCGGCGGCCGAGCTCCAAGACTGCGCGCACCTCTTCACCAGAGCCGCTGGGGTaGCTCTTCCTCCAGGTAGGT +
Preference number: 4 (lower is better)
Translates to: MLSWYLRRPSSKTARTSSPEPLG*LFLQVG
Trigger: ACCTACCTGGAGGAAGAGGCACCCCAGCGGCTCTGG...TGAAGAGGTGCGCGCAGTCTTGGAGCTCGGCCGCCGCAAGTACCAGGACAGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp TGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGATGAGGTTCACACGGTaGAGCCGCAGCCGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: CSQGPVPTHWRDLKVGALMRFTR*SRSRSQ
Trigger: CTGGGAGCGGCTGCGGCTGCACCGTGTGAACCTCAT...CAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp CCGCGCTCGAAGGCCGCAAAGAACTCTTCGCCCTCGAACATCTCCACCGTGTCAGGGTCCCGGCGCCGCTaGAGAGCGATGAGGTTCACA +
Preference number: 4 (lower is better)
Translates to: PRSKAAKNSSPSNISTVSGSRRR*RAMRFT
Trigger: TGTGAACCTCATCGCTCTGCAGCGGCGCCGGGACCC...TGACACGGTGGAGATGTTCGAGGGCGAAGAGTTCTTTGCGGCCTTCGAGCGCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp GTTTTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGCACTGCAGCAGGACCTaGTCAGGGTCCCGGCGCCGC +
Preference number: 4 (lower is better)
Translates to: VLLLTGTRPHTLERLEGGHCSRT*SGSRRR
Trigger: GCGGCGCCGGGACCCTGAGCAGGTCCTGCTGCAGTG...CCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAAAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp CATCCAGATCATCCCGGAACTCGTGCCGGATGCGCTGCACCTCCCGGTAGGACACAGCATCCACGTCGATaGCGCGCTCGAAGGCCGCAA +
Preference number: 4 (lower is better)
Translates to: HPDHPGTRAGCAAPPGRTQHPRR*RARRPQ
Trigger: TTGCGGCCTTCGAGCGCGGCATCGACGTGGATGCTG...TGTCCTACCGGGAGGTGCAGCGCATCCGGCACGAGTTCCGGGATGATCTGGATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp GGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCATCCCAGATTCAAGGGTaGCAAGGAGAGGCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: GTRPHTLERLEGGGSAHPSQIQG*QGEASP
Trigger: GGGGCTGGCCTCTCCTTGGCACCCTTGAATCTGGGA...TGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp GCCAAGCCCATGCGTCGGATGCTGTCCTGGTACTTGCGGCGGCCGAGCTCCAAGCTCAGCAGGTTGCTCTaGGTCAGAAAGCCGGTCTCG +
Preference number: 4 (lower is better)
Translates to: AKPMRRMLSWYLRRPSSKLSRLL*VRKPVS
Trigger: CGAGACCGGCTTTCTGACGCAGAGCAACCTGCTGAG...CTTGGAGCTCGGCCGCCGCAAGTACCAGGACAGCATCCGACGCATGGGCTTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp CCGCGCTCGAAGGCCGCAAAGAACTCTTCGCCCTCGAACATCTCCACCGTGTCAGGAACTCGTGCCGGATaGGCTGCACCTCCCGGTAGG +
Preference number: 4 (lower is better)
Translates to: PRSKAAKNSSPSNISTVSGTRAG*AAPPGR
Trigger: CCTACCGGGAGGTGCAGCGCATCCGGCACGAGTTCC...TGACACGGTGGAGATGTTCGAGGGCGAAGAGTTCTTTGCGGCCTTCGAGCGCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp GATCTGCTCATCCAGATCATCCCGGAACTCGTGCCGGATGCGCTGCACCTCCCGTCATCCCGGAACTCGTaGCGGATGCGCTGCACCTCC +
Preference number: 4 (lower is better)
Translates to: DLLIQIIPELVPDALHLPSSRNS*RMRCTS
Trigger: GGAGGTGCAGCGCATCCGGCACGAGTTCCGGGATGA...CGGGAGGTGCAGCGCATCCGGCACGAGTTCCGGGATGATCTGGATGAGCAGATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp GTGCAGTTTTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGCCCACAGCCCCTGGCTaGCCAGCCTGGCGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: VQFCCSQGPVPTHWRDLKPTAPG*PAWRSA
Trigger: GGCTGAGCGCCAGGCTGGGCAGCCAGGGGCTGTGGG...CTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAAAACTGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp CTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGGCCTCCTGCCGGTCACTCTaGTCCAGGGCCTGCACCAGG +
Preference number: 4 (lower is better)
Translates to: LERLEGGGSAHPLGNIWASCRSL*SRACTR
Trigger: CCTGGTGCAGGCCCTGGAGCAGAGTGACCGGCAGGA...GGCCCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp ACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATGCCGAGCTCCAAGACTaGGCGCACCTCTTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: TGTRPHTLERLEGGGSAHAELQD*AHLFSH
Trigger: GTGGCTGAAGAGGTGCGCGCAGTCTTGGAGCTCGGC...ATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp GCATCCACGTCGATGCCGCGCTCGAAGGCCGCAAAGAACTCTTCGCCCTCGAACGCCGAGCTCCAAGACTaGGCGCACCTCTTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: ASTSMPRSKAAKNSSPSNAELQD*AHLFSH
Trigger: GTGGCTGAAGAGGTGCGCGCAGTCTTGGAGCTCGGC...GTTCGAGGGCGAAGAGTTCTTTGCGGCCTTCGAGCGCGGCATCGACGTGGATGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp CGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAGCCCATGCGTCGGATaGTGTCCTGGTACTTGCGGC +
Preference number: 4 (lower is better)
Translates to: RPHTLERLEGGGSAHPLGSPCVG*CPGTCG
Trigger: GCCGCAAGTACCAGGACAGCATCCGACGCATGGGCT...CCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp ACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATTGGGGGCCAAGCCCATaGGTCGGATGCTGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: TGTRPHTLERLEGGGSAHWGPSP*VGCCPG
Trigger: ACCAGGACAGCATCCGACGCATGGGCTTGGCCCCCA...ATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp TGGGGGCCAAGCCCATGCGTCGGATGCTGTCCTGGTACTTGCGGCGGCCGAGCTACAGTGCAGTTTTGTTaGTCACAGGGACCCGTCCCC +
Preference number: 4 (lower is better)
Translates to: WGPSPCVGCCPGTCGGRATVQFC*SQGPVP
Trigger: GGGGACGGGTCCCTGTGAGCAACAAAACTGCACTGT...AGCTCGGCCGCCGCAAGTACCAGGACAGCATCCGACGCATGGGCTTGGCCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp CTGGCCCCGCACAGCCTGAGCCTCCCGGTCCAGAGTGGTGGTCACGTATACCTCATGGAGCCGTGGAGCTaGGAGGTCATAGGGGCTGTT +
Preference number: 4 (lower is better)
Translates to: LAPHSLSLPVQSGGHVYLMEPWS*EVIGAV
Trigger: AACAGCCCCTATGACCTCGCAGCTCCACGGCTCCAT...GAGGTATACGTGACCACCACTCTGGACCGGGAGGCTCAGGCTGTGCGGGGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524486.5
CDS-3UTR GCA 90 bp AGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGGCCAGCCCCCGCTGCGGGCAGTTaGTGGCTTAGGCTTGGCACC +
Preference number: 4 (lower is better)
Translates to: RDLKVGALPIHWGISGPAPAAGS*WLRLGT
Trigger: GGTGCCAAGCCTAAGCCAGCAACTGCCCGCAGCGGG...GGCTGGCCCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000524486.5
CDS-3UTR CCA 90 bp CAGAGCGGGGTCCTTGGGGGCCAAGCCCATGCGTCGGATGCTGTCCTGGTACTTAGCTGCAGAGGCTGCTaGACACACAGGTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: QSGVLGGQAHASDAVLVLSCRGC*THRCSS
Trigger: GCTGCTGCACCTGTGTGTCCAGCAGCCTCTGCAGCT...AAGTACCAGGACAGCATCCGACGCATGGGCTTGGCCCCCAAGGACCCCGCTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
CDS-3UTR CCA 90 bp AGGTTGCTCTGCGTCAGAAAGCCGGTCTCGGCATCTCCCAGATTCAAGGGTGCCGCAGCTGGGCCAGGGTaGCCTCCAGCAGCTGAGGGT +
Preference number: 4 (lower is better)
Translates to: RLLCVRKPVSASPRFKGAAAGPG*PPAAEG
Trigger: ACCCTCAGCTGCTGGAGGCCACCCTGGCCCAGCTGC...GGCACCCTTGAATCTGGGAGATGCCGAGACCGGCTTTCTGACGCAGAGCAACCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
CDS-3UTR CCA 90 bp CTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGGCCGGCAGGTCCCGGAGCTaGTTGTCCCTCAGGTCGAGC +
Preference number: 4 (lower is better)
Translates to: LERLEGGGSAHPLGNIWAGRSRS*LSLRSS
Trigger: GCTCGACCTGAGGGACAACCAGCTCCGGGACCTGCC...GGCCCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
CDS-3UTR CCA 90 bp GGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACGCACCAGGCAGGCATTaGACACAGGGCGGGAAACCA +
Preference number: 4 (lower is better)
Translates to: GPVPTHWRDLKVGALPIHAPGRH*TQGGKP
Trigger: TGGTTTCCCGCCCTGTGTCCAATGCCTGCCTGGTGC...GTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CCA 90 bp GTCAGGGCGGTCAGCATCCACGTCGATGCCGCGCTCGAAGGCCGCAAAGAACTCGCACCAGGCAGGCATTaGACACAGGGCGGGAAACCA +
Preference number: 4 (lower is better)
Translates to: VRAVSIHVDAALEGRKELAPGRH*TQGGKP
Trigger: TGGTTTCCCGCCCTGTGTCCAATGCCTGCCTGGTGC...GAGTTCTTTGCGGCCTTCGAGCGCGGCATCGACGTGGATGCTGACCGCCCTGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CCA 90 bp ACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGCAGTGTCCCCTCCGGTaGCACCAGGCAGGCATTGGA +
Preference number: 4 (lower is better)
Translates to: TRPHTLERLEGGGSAHPLQCPLR*HQAGIG
Trigger: TCCAATGCCTGCCTGGTGCCACCGGAGGGGACACTG...CAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CCA 90 bp CACACAGTCAGGGCGGTCAGCATCCACGTCGATGCCGCGCTCGAAGGCCGCAAATGCGCACCACCTGCATaGAGACTCGACGAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: HTVRAVSIHVDAALEGRKCAPPA*RLDEAP
Trigger: AGGAGCCTCGTCGAGTCTCCATGCAGGTGGTGCGCA...TTTGCGGCCTTCGAGCGCGGCATCGACGTGGATGCTGACCGCCCTGACTGTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CCA 90 bp CCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGAAGCGTGCGTACAGGTaGGTGAGCTCCAGGACCACC +
Preference number: 4 (lower is better)
Translates to: PVPTHWRDLKVGALPIHWKRAYR*VSSRTT
Trigger: GGTGGTCCTGGAGCTCACCCACCTGTACGCACGCTT...CCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000531286.5
CDS-3UTR CCA 90 bp GAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGGCCAGCGCAGCCGCCGAAGGGTaGCGTCCACCTTGTTTCGGG +
Preference number: 4 (lower is better)
Translates to: ERLEGGGSAHPLGNIWASAAAEG*RPPCFG
Trigger: CCCGAAACAAGGTGGACGCCACCCTTCGGCGGCTGC...GCTGGCCCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CCA 90 bp CCGCGCTCGAAGGCCGCAAAGAACTCTTCGCCCTCGAACATCTCCACCGTGTCACGTCGGATGCTGTCCTaGTACTTGCGGCGGCCGAGC +
Preference number: 4 (lower is better)
Translates to: PRSKAAKNSSPSNISTVSRRMLS*YLRRPS
Trigger: GCTCGGCCGCCGCAAGTACCAGGACAGCATCCGACG...TGACACGGTGGAGATGTTCGAGGGCGAAGAGTTCTTTGCGGCCTTCGAGCGCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CCA 90 bp GGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACAGCCTAAAAGTCTGTaGGGCCTAGGCCTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: GTRPHTLERLEGGGSAHPQPKSL*GLGLGR
Trigger: CCTGCCCAGGCCTAGGCCCCACAGACTTTTAGGCTG...TGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CCA 90 bp GGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACGCTCTGCCCATCCACTaGGGAATATCTGGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: GPVPTHWRDLKVGALPIHALPIH*GISGPA
Trigger: GGCTGGCCCAGATATTCCCCAGTGGATGGGCAGAGC...GTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CCA 90 bp GGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCAGCTCTGCCCATCCACTaGGGAATATCTGGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: GTRPHTLERLEGGGSAHPALPIH*GISGPA
Trigger: GGCTGGCCCAGATATTCCCCAGTGGATGGGCAGAGC...TGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CCA 90 bp CCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGCCCGTCCCCACACACTaGAGAGACTTGAAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: PVPTHWRDLKVGALPIHWPVPTH*RDLKVG
Trigger: CCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGG...CCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CCA 90 bp CGGATGCTGTCCTGGTACTTGCGGCGGCCGAGCTCCAAGACTGCGCGCACCTCTCTGGTCCTGGAAATCTaGCCAATGGAGCCGTGGAGC +
Preference number: 4 (lower is better)
Translates to: RMLSWYLRRPSSKTARTSLVLEI*PMEPWS
Trigger: GCTCCACGGCTCCATTGGCCAGATTTCCAGGACCAG...AGAGGTGCGCGCAGTCTTGGAGCTCGGCCGCCGCAAGTACCAGGACAGCATCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524486.5
CDS-3UTR CCA 90 bp GTCCCCTCCGGTGGCACCAGGCAGGCATTGGACACAGGGCGGGAAACCACAAGGCACTGGAAAGAGGGTTaGGGAATGGGACCGCCATGG +
Preference number: 4 (lower is better)
Translates to: VPSGGTRQALDTGRETTRHWKEG*GMGPPW
Trigger: CCATGGCGGTCCCATTCCCCAACCCTCTTTCCAGTG...CCTTGTGGTTTCCCGCCCTGTGTCCAATGCCTGCCTGGTGCCACCGGAGGGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
CDS-3UTR CCA 90 bp CACACAGTCAGGGCGGTCAGCATCCACGTCGATGCCGCGCTCGAAGGCCGCAAAGGACTCTGGATGGAGTaGGGAGCTCTAGAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: HTVRAVSIHVDAALEGRKGLWME*GALEPG
Trigger: GCCTGGCTCTAGAGCTCCCCACTCCATCCAGAGTCC...TTTGCGGCCTTCGAGCGCGGCATCGACGTGGATGCTGACCGCCCTGACTGTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
CDS-3UTR CCA 90 bp CCGCAGCCGCTCCCAGGCCTTCCGAGCCAGGCCTCCCACACAGTTCTTGGTGGTGGGAAACAGGGACTCTaGATGGAGTGGGGAGCTCTA +
Preference number: 4 (lower is better)
Translates to: PQPLPGLPSQASHTVLGGGKQGL*MEWGAL
Trigger: TAGAGCTCCCCACTCCATCCAGAGTCCCTGTTTCCC...ACCACCAAGAACTGTGTGGGAGGCCTGGCTCGGAAGGCCTGGGAGCGGCTGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
CDS-3UTR CCA 90 bp CAAAGAACTCTTCGCCCTCGAACATCTCCACCGTGTCAGAGGGCTCGGGGCCCCTGTGGACCAAGCCTGTaGGTGCAGAGGCCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: QRTLRPRTSPPCQRARGPCGPSL*VQRPLQ
Trigger: CTGCAGGGGCCTCTGCACCCACAGGCTTGGTCCACA...GGGGCCCCGAGCCCTCTGACACGGTGGAGATGTTCGAGGGCGAAGAGTTCTTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524486.5
CDS-3UTR TCA 90 bp ACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATTGCGTCCGAATCCTCTaGAGCATCTCCTGCGGCAGC +
Preference number: 4 (lower is better)
Translates to: TGTRPHTLERLEGGGSAHCVRIL*SISCGS
Trigger: GCTGCCGCAGGAGATGCTTCAGAGGATTCGGACGCA...ATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
CDS-3UTR TCA 90 bp TTTTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGGCGTTGCCCTCCTTTaGGGACCAGGGAGCGGAGGC +
Preference number: 4 (lower is better)
Translates to: FCCSQGPVPTHWRDLKVGGVALL*GPGSGG
Trigger: GCCTCCGCTCCCTGGTCCTCAAAGGAGGGCAACGCC...CCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAAAA
62% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000347755.10
ENST00000411829.6
CDS-3UTR TCA 90 bp GGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTCAGAGAGGCAGTTGTaGGACAGCAAGAGCGCACCC +
Preference number: 4 (lower is better)
Translates to: GPVPTHWRDLKVGALPIHSERQL*DSKSAP
Trigger: GGGTGCGCTCTTGCTGTCTCACAACTGCCTCTCTGA...GTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
CDS-3UTR TCA 90 bp ACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGGAGGGCTGCCACTGGTaGACTCGGGGCGTCTGGCGA +
Preference number: 4 (lower is better)
Translates to: TLERLEGGGSAHPLGNIWEGCHW*TRGVWR
Trigger: TCGCCAGACGCCCCGAGTTCACCAGTGGCAGCCCTC...CCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR TCA 90 bp CGGATGCTGTCCTGGTACTTGCGGCGGCCGAGCTCCAAGACTGCGCGCACCTCTTGGGCATTTCTGGAATaGGGGCTGCCACTGGTGAAC +
Preference number: 4 (lower is better)
Translates to: RMLSWYLRRPSSKTARTSWAFLE*GLPLVN
Trigger: GTTCACCAGTGGCAGCCCTCATTCCAGAAATGCCCA...AGAGGTGCGCGCAGTCTTGGAGCTCGGCCGCCGCAAGTACCAGGACAGCATCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR TCA 90 bp CCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGTCACTGAGCAGCCTTaGGGGGTCACAGGAAAGCTG +
Preference number: 4 (lower is better)
Translates to: PVPTHWRDLKVGALPIHWVTEQP*GVTGKL
Trigger: CAGCTTTCCTGTGACCCCTCAAGGCTGCTCAGTGAC...CCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR TCA 90 bp ACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGGCCGATAGCGGATGGTaGTGGGGGTGGCGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: TLERLEGGGSAHPLGNIWADSGW*WGWRWL
Trigger: GAGCCACCGCCACCCCCATCACCATCCGCTATCGGC...CCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR TCA 90 bp CTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGGCCGCTCCAGCACATGGCTaGGCAGGGCGTCATGAGGAC +
Preference number: 4 (lower is better)
Translates to: LERLEGGGSAHPLGNIWAAPAHG*AGRHED
Trigger: GTCCTCATGACGCCCTGCTCAGCCATGTGCTGGAGC...GGCCCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR TCA 90 bp TGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTGCTCCAGCACATGGCTaGGCAGGGCGTCATGAGGAC +
Preference number: 4 (lower is better)
Translates to: CCSQGPVPTHWRDLKVGAAPAHG*AGRHED
Trigger: GTCCTCATGACGCCCTGCTCAGCCATGTGCTGGAGC...AGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR TCA 90 bp CCGCGCTCGAAGGCCGCAAAGAACTCTTCGCCCTCGAACATCTCCACCGTGTCAGCTCCAGCACATGGCTaGGCAGGGCGTCATGAGGAC +
Preference number: 4 (lower is better)
Translates to: PRSKAAKNSSPSNISTVSAPAHG*AGRHED
Trigger: GTCCTCATGACGCCCTGCTCAGCCATGTGCTGGAGC...TGACACGGTGGAGATGTTCGAGGGCGAAGAGTTCTTTGCGGCCTTCGAGCGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR TCA 90 bp ACAGTGCAGTTTTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGGGGCCTGCGGTGGGGTaGAGAGCAGCCACAGCCCCA +
Preference number: 4 (lower is better)
Translates to: TVQFCCSQGPVPTHWRDLGPAVG*RAATAP
Trigger: TGGGGCTGTGGCTGCTCTTCACCCCACCGCAGGCCC...CAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAAAACTGCACTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR TCA 90 bp TGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCACACTGGAGAGACTTaGAGGTGGGGGCTCTGCCCA +
Preference number: 4 (lower is better)
Translates to: CSQGPVPTHWRDLKVGALHTGET*RWGLCP
Trigger: TGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTG...CAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp GTTTTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGTGGCCCCTCCACCGTTaGAGCCATCGCCCACCGACG +
Preference number: 4 (lower is better)
Translates to: VLLLTGTRPHTLERLEGGWPLHR*SHRPPT
Trigger: CGTCGGTGGGCGATGGCTGCAACGGTGGAGGGGCCA...CCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAAAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
CDS-3UTR GCA 90 bp AGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGGCCAGCCTACCAAGCTCAGCCGGTTaGCGCCCAGGAAAGGCAGCG +
Preference number: 4 (lower is better)
Translates to: RLEGGGSAHPLGNIWASLPSSAG*RPGKAA
Trigger: CGCTGCCTTTCCTGGGCGGCAACCGGCTGAGCTTGG...TAGGCTGGCCCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
CDS-3UTR GCA 90 bp CGAAGGCCGCAAAGAACTCTTCGCCCTCGAACATCTCCACCGTGTCAGAGGGCTCCAAGCTCAGCCGGTTaGCGCCCAGGAAAGGCAGCG +
Preference number: 4 (lower is better)
Translates to: RRPQRTLRPRTSPPCQRAPSSAG*RPGKAA
Trigger: CGCTGCCTTTCCTGGGCGGCAACCGGCTGAGCTTGG...AGCCCTCTGACACGGTGGAGATGTTCGAGGGCGAAGAGTTCTTTGCGGCCTTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
CDS-3UTR GCA 90 bp TTTTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGCACAGGTGCAGCAGCTaGTGGCAGCCCCCGGGGTAC +
Preference number: 4 (lower is better)
Translates to: FCCSQGPVPTHWRDLKVGHRCSS*WQPPGY
Trigger: GTACCCCGGGGGCTGCCAGCAGCTGCTGCACCTGTG...CCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
CDS-3UTR GCA 90 bp AGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGGCCAGCCTGCTGGACACACAGGTaGAGCAGCTGCTGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: RDLKVGALPIHWGISGPACWTHR*SSCWQP
Trigger: GGGCTGCCAGCAGCTGCTGCACCTGTGTGTCCAGCA...GGCTGGCCCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
CDS-3UTR GCA 90 bp GATGCCGCGCTCGAAGGCCGCAAAGAACTCTTCGCCCTCGAACATCTCCACCGTTGCTGGACACACAGGTaGAGCAGCTGCTGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: DAALEGRKELFALEHLHRCWTHR*SSCWQP
Trigger: GGGCTGCCAGCAGCTGCTGCACCTGTGTGTCCAGCA...ACGGTGGAGATGTTCGAGGGCGAAGAGTTCTTTGCGGCCTTCGAGCGCGGCATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
CDS-3UTR GCA 90 bp TCAGCATCCACGTCGATGCCGCGCTCGAAGGCCGCAAAGAACTCTTCGCCCTCGTCCACCTGCAGCAGCTaGAGAGGCTGCTGGACACAC +
Preference number: 4 (lower is better)
Translates to: SASTSMPRSKAAKNSSPSSTCSS*RGCWTH
Trigger: GTGTGTCCAGCAGCCTCTGCAGCTGCTGCAGGTGGA...CGAGGGCGAAGAGTTCTTTGCGGCCTTCGAGCGCGGCATCGACGTGGATGCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
CDS-3UTR GCA 90 bp CTGCTCATCCAGATCATCCCGGAACTCGTGCCGGATGCGCTGCACCTCCCGGTATCCACCTGCAGCAGCTaGAGAGGCTGCTGGACACAC +
Preference number: 4 (lower is better)
Translates to: LLIQIIPELVPDALHLPVSTCSS*RGCWTH
Trigger: GTGTGTCCAGCAGCCTCTGCAGCTGCTGCAGGTGGA...TACCGGGAGGTGCAGCGCATCCGGCACGAGTTCCGGGATGATCTGGATGAGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
CDS-3UTR GCA 90 bp GGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACGCAAGAATTCCACCTaGAGCAGCTGCAGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: GTRPHTLERLEGGGSAHPRKNST*SSCRGC
Trigger: GCAGCCTCTGCAGCTGCTGCAGGTGGAATTCTTGCG...TGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
CDS-3UTR GCA 90 bp ACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATAGTGTGTCCCGGCGTTaGCCTCCTTTGAGGACCAGG +
Preference number: 4 (lower is better)
Translates to: TGTRPHTLERLEGGGSAHSVSRR*PPLRTR
Trigger: CCTGGTCCTCAAAGGAGGGCAACGCCGGGACACACT...ATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000347755.10
ENST00000411829.6
CDS-3UTR GCA 90 bp GAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGGCCAGCCCCAGACCTCGCATCTaGAGGACACAGGCCGGCAGT +
Preference number: 4 (lower is better)
Translates to: ERLEGGGSAHPLGNIWASPRPRI*RTQAGS
Trigger: ACTGCCGGCCTGTGTCCTGCAGATGCGAGGTCTGGG...GCTGGCCCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
CDS-3UTR GCA 90 bp CTCAGCAGGTTGCTCTGCGTCAGAAAGCCGGTCTCGGCATCTCCCAGATTCAAGGAGGCTGGGAGGCTCTaGAGCCGGTTGGAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: LSRLLCVRKPVSASPRFKEAGRL*SRLEAR
Trigger: CCTGGCCTCCAACCGGCTGCAGAGCCTCCCAGCCTC...CTTGAATCTGGGAGATGCCGAGACCGGCTTTCTGACGCAGAGCAACCTGCTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
CDS-3UTR GCA 90 bp GTGCAGTTTTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGCTCCCGCTGGGAACTaGAGGCGGACGCCACAGGCC +
Preference number: 4 (lower is better)
Translates to: VQFCCSQGPVPTHWRDLKAPAGN*RRTPQA
Trigger: GGCCTGTGGCGTCCGCCTGCAGTTCCCAGCGGGAGC...CTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAAAACTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp CAGCCACACTCAGCAGGTTGCTCTGCGTCAGAAAGCCGGTCTCGGCATCTCCCACCAGAGCCGCTGGGGTaGCTCTTCCTCCAGGTAGGT +
Preference number: 4 (lower is better)
Translates to: QPHSAGCSASESRSRHLPPEPLG*LFLQVG
Trigger: ACCTACCTGGAGGAAGAGGCACCCCAGCGGCTCTGG...TGGGAGATGCCGAGACCGGCTTTCTGACGCAGAGCAACCTGCTGAGTGTGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp CCGCGCTCGAAGGCCGCAAAGAACTCTTCGCCCTCGAACATCTCCACCGTGTCAGCCATGCGCACCACCTaGATGGAGACTCGACGAGGC +
Preference number: 4 (lower is better)
Translates to: PRSKAAKNSSPSNISTVSAMRTT*METRRG
Trigger: GCCTCGTCGAGTCTCCATGCAGGTGGTGCGCATGGC...TGACACGGTGGAGATGTTCGAGGGCGAAGAGTTCTTTGCGGCCTTCGAGCGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp GATGCCGCGCTCGAAGGCCGCAAAGAACTCTTCGCCCTCGAACATCTCCACCGTGCCATGCGCACCACCTaGATGGAGACTCGACGAGGC +
Preference number: 4 (lower is better)
Translates to: DAALEGRKELFALEHLHRAMRTT*METRRG
Trigger: GCCTCGTCGAGTCTCCATGCAGGTGGTGCGCATGGC...ACGGTGGAGATGTTCGAGGGCGAAGAGTTCTTTGCGGCCTTCGAGCGCGGCATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp TCCACGTCGATGCCGCGCTCGAAGGCCGCAAAGAACTCTTCGCCCTCGAACATCGCCATGCGCACCACCTaGATGGAGACTCGACGAGGC +
Preference number: 4 (lower is better)
Translates to: STSMPRSKAAKNSSPSNIAMRTT*METRRG
Trigger: GCCTCGTCGAGTCTCCATGCAGGTGGTGCGCATGGC...GATGTTCGAGGGCGAAGAGTTCTTTGCGGCCTTCGAGCGCGGCATCGACGTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp TGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCAGCAGGGGGCTCACTaGAGCCTCTGGTTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: CCSQGPVPTHWRDLKVGAQQGAH*SLWFSQ
Trigger: CTGGGAGAACCAGAGGCTGCAGTGAGCCCCCTGCTG...AGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp TGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTATGAGGTTCACACGGTaGAGCCGCAGCCGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: CCSQGPVPTHWRDLKVGAMRFTR*SRSRSQ
Trigger: CTGGGAGCGGCTGCGGCTGCACCGTGTGAACCTCAT...AGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp TTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCATGAGGTTCACACGGTaGAGCCGCAGCCGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: LLLTGTRPHTLERLEGGGMRFTR*SRSRSQ
Trigger: CTGGGAGCGGCTGCGGCTGCACCGTGTGAACCTCAT...GCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp AGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGGCCAGCCTTTCGGGGCAGGCACTaGAGCAGGACCTGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: RDLKVGALPIHWGISGPAFRGRH*SRTCSG
Trigger: CCCTGAGCAGGTCCTGCTGCAGTGCCTGCCCCGAAA...GGCTGGCCCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp CCGCACAGGCACCGCGCCACGGTAGAAGGACACCTCCTTCACATTCTTCAGGTGTTTCGGGGCAGGCACTaGAGCAGGACCTGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: PHRHRATVEGHLLHILQVFRGRH*SRTCSG
Trigger: CCCTGAGCAGGTCCTGCTGCAGTGCCTGCCCCGAAA...CACCTGAAGAATGTGAAGGAGGTGTCCTTCTACCGTGGCGCGGTGCCTGTGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531286.5
CDS-3UTR GCA 90 bp AGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGGCCAGCCCAGCATCCACGTCGATaGCGCGCTCGAAGGCCGCAA +
Preference number: 4 (lower is better)
Translates to: RDLKVGALPIHWGISGPAQHPRR*RARRPQ
Trigger: TTGCGGCCTTCGAGCGCGGCATCGACGTGGATGCTG...GGCTGGCCCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp CCGCTGCAGAGCGATGAGGTTCACACGGTGCAGCCGCAGCCGCTCCCAGGCCTTAGACAAAGCAGATTCTaGCCTCCACACAGTCAGGGC +
Preference number: 4 (lower is better)
Translates to: PLQSDEVHTVQPQPLPGLRQSRF*PPHSQG
Trigger: GCCCTGACTGTGTGGAGGGCAGAATCTGCTTTGTCT...AAGGCCTGGGAGCGGCTGCGGCTGCACCGTGTGAACCTCATCGCTCTGCAGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
CDS-3UTR GCA 90 bp CGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGCCACACTCAGCAGGTTaGTCTGCGTCAGAAAGCCGG +
Preference number: 4 (lower is better)
Translates to: RPHTLERLEGGGSAHPLGPHSAG*SASESR
Trigger: CCGGCTTTCTGACGCAGAGCAACCTGCTGAGTGTGG...CCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp AGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGGCCAGCCTAGGAACTCGTGCCGGATaGGCTGCACCTCCCGGTAGG +
Preference number: 4 (lower is better)
Translates to: RLEGGGSAHPLGNIWASLGTRAG*AAPPGR
Trigger: CCTACCGGGAGGTGCAGCGCATCCGGCACGAGTTCC...TAGGCTGGCCCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp TGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGGCCATCCTGCCGGTCACTCTaGTCCAGGGCCTGCACCAGG +
Preference number: 4 (lower is better)
Translates to: WRDLKVGALPIHWGISGPSCRSL*SRACTR
Trigger: CCTGGTGCAGGCCCTGGAGCAGAGTGACCGGCAGGA...TGGCCCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp TCAGCATCCACGTCGATGCCGCGCTCGAAGGCCGCAAAGAACTCTTCGCCCTCGTCTTCAGCCACGTCCTaGCGGTCACTCTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: SASTSMPRSKAAKNSSPSSSATS*RSLCSR
Trigger: CCTGGAGCAGAGTGACCGGCAGGACGTGGCTGAAGA...CGAGGGCGAAGAGTTCTTTGCGGCCTTCGAGCGCGGCATCGACGTGGATGCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp GAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGGCCAGCGCCGAGCTCCAAGACTaGGCGCACCTCTTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: ERLEGGGSAHPLGNIWASAELQD*AHLFSH
Trigger: GTGGCTGAAGAGGTGCGCGCAGTCTTGGAGCTCGGC...GCTGGCCCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp CAGCCACACTCAGCAGGTTGCTCTGCGTCAGAAAGCCGGTCTCGGCATCTCCCATGGGGGCCAAGCCCATaGGTCGGATGCTGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: QPHSAGCSASESRSRHLPWGPSP*VGCCPG
Trigger: ACCAGGACAGCATCCGACGCATGGGCTTGGCCCCCA...TGGGAGATGCCGAGACCGGCTTTCTGACGCAGAGCAACCTGCTGAGTGTGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp GAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGGCCAGCTGGGGGCCAAGCCCATaGGTCGGATGCTGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: ERLEGGGSAHPLGNIWASWGPSP*VGCCPG
Trigger: ACCAGGACAGCATCCGACGCATGGGCTTGGCCCCCA...GCTGGCCCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CCA 90 bp ACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATAGCTGCAGAGGCTGCTaGACACACAGGTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: TGTRPHTLERLEGGGSAHSCRGC*THRCSS
Trigger: GCTGCTGCACCTGTGTGTCCAGCAGCCTCTGCAGCT...ATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
CDS-3UTR CCA 90 bp TTTTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCAGCTGGGCCAGGGTaGCCTCCAGCAGCTGAGGGT +
Preference number: 4 (lower is better)
Translates to: FCCSQGPVPTHWRDLKVGAAGPG*PPAAEG
Trigger: ACCCTCAGCTGCTGGAGGCCACCCTGGCCCAGCTGC...CCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
CDS-3UTR CCA 90 bp TGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGGCCAGAGCCGGGTGAGGAGTaGAAGGCGGGCCAAGTCAGC +
Preference number: 4 (lower is better)
Translates to: WRDLKVGALPIHWGISGPEPGEE*KAGQVS
Trigger: GCTGACTTGGCCCGCCTTCCACTCCTCACCCGGCTC...TGGCCCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
CDS-3UTR CCA 90 bp CGAAGGCCGCAAAGAACTCTTCGCCCTCGAACATCTCCACCGTGTCAGAGGGCTGGCAGGTCCCGGAGCTaGTTGTCCCTCAGGTCGAGC +
Preference number: 4 (lower is better)
Translates to: RRPQRTLRPRTSPPCQRAGRSRS*LSLRSS
Trigger: GCTCGACCTGAGGGACAACCAGCTCCGGGACCTGCC...AGCCCTCTGACACGGTGGAGATGTTCGAGGGCGAAGAGTTCTTTGCGGCCTTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
CDS-3UTR CCA 90 bp GCCAAGCCCATGCGTCGGATGCTGTCCTGGTACTTGCGGCGGCCGAGCTCCAAGCAGTCTGGGCATTTCTaGAATGAGGGCTGCCACTGG +
Preference number: 4 (lower is better)
Translates to: AKPMRRMLSWYLRRPSSKQSGHF*NEGCHW
Trigger: CCAGTGGCAGCCCTCATTCCAGAAATGCCCAGACTG...CTTGGAGCTCGGCCGCCGCAAGTACCAGGACAGCATCCGACGCATGGGCTTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CCA 90 bp AAACAGTGCAGTTTTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTGGCGGTGGCTCCCGCTaGGAACTGCAGGCGGACGCC +
Preference number: 4 (lower is better)
Translates to: KQCSFVAHRDPSPHTGETGGGSR*ELQADA
Trigger: GGCGTCCGCCTGCAGTTCCCAGCGGGAGCCACCGCC...AGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAAAACTGCACTGTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CCA 90 bp AACAGTGCAGTTTTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGGCGGTGGCTCCCGCTaGGAACTGCAGGCGGACGCC +
Preference number: 4 (lower is better)
Translates to: NSAVLLLTGTRPHTLERLGGGSR*ELQADA
Trigger: GGCGTCCGCCTGCAGTTCCCAGCGGGAGCCACCGCC...AAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAAAACTGCACTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CCA 90 bp TGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTTGGAAGGCCACCCCATaGGGCTGCAGCTCCAGCACA +
Preference number: 4 (lower is better)
Translates to: CCSQGPVPTHWRDLKVGAWKATP*GCSSST
Trigger: TGTGCTGGAGCTGCAGCCCCATGGGGTGGCCTTCCA...AGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CCA 90 bp TGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGGCACCAGGCAGGCATTaGACACAGGGCGGGAAACCA +
Preference number: 4 (lower is better)
Translates to: CSQGPVPTHWRDLKVGALAPGRH*TQGGKP
Trigger: TGGTTTCCCGCCCTGTGTCCAATGCCTGCCTGGTGC...CAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CCA 90 bp CAAAGAACTCTTCGCCCTCGAACATCTCCACCGTGTCAGAGGGCTCGGGGCCCCTGCGCACCACCTGCATaGAGACTCGACGAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: QRTLRPRTSPPCQRARGPCAPPA*RLDEAP
Trigger: AGGAGCCTCGTCGAGTCTCCATGCAGGTGGTGCGCA...GGGGCCCCGAGCCCTCTGACACGGTGGAGATGTTCGAGGGCGAAGAGTTCTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CCA 90 bp GAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGGCCAGCCCGGTTGGAGGAAGCTaGGGGGACCGCTCTGTGACA +
Preference number: 4 (lower is better)
Translates to: ERLEGGGSAHPLGNIWASPVGGS*GDRSVT
Trigger: TGTCACAGAGCGGTCCCCCCAGCTTCCTCCAACCGG...GCTGGCCCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CCA 90 bp TGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCCGGTTGGAGGAAGCTaGGGGGACCGCTCTGTGACA +
Preference number: 4 (lower is better)
Translates to: CCSQGPVPTHWRDLKVGAPVGGS*GDRSVT
Trigger: TGTCACAGAGCGGTCCCCCCAGCTTCCTCCAACCGG...AGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CCA 90 bp ACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATAAGCGTGCGTACAGGTaGGTGAGCTCCAGGACCACC +
Preference number: 4 (lower is better)
Translates to: TGTRPHTLERLEGGGSAHKRAYR*VSSRTT
Trigger: GGTGGTCCTGGAGCTCACCCACCTGTACGCACGCTT...ATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000531286.5
CDS-3UTR CCA 90 bp AGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGGCCAGCCTAGCAGCCGCCGAAGGGTaGCGTCCACCTTGTTTCGGG +
Preference number: 4 (lower is better)
Translates to: RLEGGGSAHPLGNIWASLAAAEG*RPPCFG
Trigger: CCCGAAACAAGGTGGACGCCACCCTTCGGCGGCTGC...TAGGCTGGCCCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CCA 90 bp TTTTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGTGCAGGGCCACGGCTaGCCAGTCCAGACCCAGACG +
Preference number: 4 (lower is better)
Translates to: FCCSQGPVPTHWRDLKVGVQGHG*PVQTQT
Trigger: CGTCTGGGTCTGGACTGGCCAGCCGTGGCCCTGCAC...CCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CCA 90 bp TGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGGCCACGTCGGATGCTGTCCTaGTACTTGCGGCGGCCGAGC +
Preference number: 4 (lower is better)
Translates to: WRDLKVGALPIHWGISGPRRMLS*YLRRPS
Trigger: GCTCGGCCGCCGCAAGTACCAGGACAGCATCCGACG...TGGCCCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CCA 90 bp TGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCAGCCTAAAAGTCTGTaGGGCCTAGGCCTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: CSQGPVPTHWRDLKVGALQPKSL*GLGLGR
Trigger: CCTGCCCAGGCCTAGGCCCCACAGACTTTTAGGCTG...CAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CCA 90 bp GCATCCACGTCGATGCCGCGCTCGAAGGCCGCAAAGAACTCTTCGCCCTCGAACCAGCCTAAAAGTCTGTaGGGCCTAGGCCTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: ASTSMPRSKAAKNSSPSNQPKSL*GLGLGR
Trigger: CCTGCCCAGGCCTAGGCCCCACAGACTTTTAGGCTG...GTTCGAGGGCGAAGAGTTCTTTGCGGCCTTCGAGCGCGGCATCGACGTGGATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CCA 90 bp ACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATGCTCTGCCCATCCACTaGGGAATATCTGGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: TGTRPHTLERLEGGGSAHALPIH*GISGPA
Trigger: GGCTGGCCCAGATATTCCCCAGTGGATGGGCAGAGC...ATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CCA 90 bp CAAAGAACTCTTCGCCCTCGAACATCTCCACCGTGTCAGAGGGCTCGGGGCCCCGCTCTGCCCATCCACTaGGGAATATCTGGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: QRTLRPRTSPPCQRARGPALPIH*GISGPA
Trigger: GGCTGGCCCAGATATTCCCCAGTGGATGGGCAGAGC...GGGGCCCCGAGCCCTCTGACACGGTGGAGATGTTCGAGGGCGAAGAGTTCTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CCA 90 bp TGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGGCCATGGGGCGTGAGCCATTaGGCAGCTTCGGGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: WRDLKVGALPIHWGISGPWGVSH*AASGSW
Trigger: CCAGGACCCCGAAGCTGCCCAATGGCTCACGCCCCA...TGGCCCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000524486.5
CDS-3UTR CCA 90 bp ACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGCAGAGCCAGTACAGGTaGGTGAGCTCCAGGACCACC +
Preference number: 4 (lower is better)
Translates to: TRPHTLERLEGGGSAHPLQSQYR*VSSRTT
Trigger: GGTGGTCCTGGAGCTCACCCACCTGTACTGGCTCTG...CAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525028.6
3UTR CAA 72 bp TCCCAGGCCTTCCGAGCCAGGCCTCCCACACAGTTCTaGGTGGTGTACCAGAGCCAGTACAGGTGGGTGAGC +
Preference number: 4 (lower is better)
Translates to: SQAFRARPPTQF*VVYQSQYRWVS
Trigger: GCTCACCCACCTGTACTGGCTCTGGTACACCACCAAGAACTGTGTGGGAGGCCTGGCTCGGAAGGCCTGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525028.6
CDS-3UTR TCA 90 bp GAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGGCCAGCTGCGTCCGAATCCTCTaGAGCATCTCCTGCGGCAGC +
Preference number: 4 (lower is better)
Translates to: ERLEGGGSAHPLGNIWASCVRIL*SISCGS
Trigger: GCTGCCGCAGGAGATGCTTCAGAGGATTCGGACGCA...GCTGGCCCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
CDS-3UTR TCA 90 bp ACAGTGCAGTTTTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGGAGGGCTGCCACTGGTaGACTCGGGGCGTCTGGCGA +
Preference number: 4 (lower is better)
Translates to: TVQFCCSQGPVPTHWRDLEGCHW*TRGVWR
Trigger: TCGCCAGACGCCCCGAGTTCACCAGTGGCAGCCCTC...CAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAAAACTGCACTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR TCA 90 bp GTCAGGGCGGTCAGCATCCACGTCGATGCCGCGCTCGAAGGCCGCAAAGAACTCTGGGCATTTCTGGAATaGGGGCTGCCACTGGTGAAC +
Preference number: 4 (lower is better)
Translates to: VRAVSIHVDAALEGRKELWAFLE*GLPLVN
Trigger: GTTCACCAGTGGCAGCCCTCATTCCAGAAATGCCCA...GAGTTCTTTGCGGCCTTCGAGCGCGGCATCGACGTGGATGCTGACCGCCCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR TCA 90 bp ACAGTGCAGTTTTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGGCCGATAGCGGATGGTaGTGGGGGTGGCGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: TVQFCCSQGPVPTHWRDLADSGW*WGWRWL
Trigger: GAGCCACCGCCACCCCCATCACCATCCGCTATCGGC...CAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAAAACTGCACTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR TCA 90 bp AAACAGTGCAGTTTTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGGGGCACCTGGCAGTaGGCCCAGAGCCGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: KQCSFVAHRDPSPHTGETWGTWQ*AQSRWG
Trigger: ACCCCAGCGGCTCTGGGCTCACTGCCAGGTGCCCCA...AGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAAAACTGCACTGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR TCA 90 bp GACGCCCAGCCACACTCAGCAGGTTGCTCTGCGTCAGAAAGCCGGTCTCGGCATACTTTGACCCCAGGATaGCCCGAGGAGCACAGCAGT +
Preference number: 4 (lower is better)
Translates to: DAQPHSAGCSASESRSRHTLTPG*PEEHSS
Trigger: ACTGCTGTGCTCCTCGGGTCATCCTGGGGTCAAAGT...ATGCCGAGACCGGCTTTCTGACGCAGAGCAACCTGCTGAGTGTGGCTGGGCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR TCA 90 bp CTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGGCCGGACCACCTGAGCTGTaGTGTCATCCCAGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: LERLEGGGSAHPLGNIWAGPPEL*CHPRWL
Trigger: CAGCCACCTGGGATGACATCACAGCTCAGGTGGTCC...GGCCCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR TCA 90 bp TTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCCACACTGGAGAGACTTaGAGGTGGGGGCTCTGCCCA +
Preference number: 4 (lower is better)
Translates to: LLLTGTRPHTLERLEGGGHTGET*RWGLCP
Trigger: TGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTG...GCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp AGTGCAGTTTTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAACCGGGGAAGCTGCGCTaGAGGCGGCGCGCAAAGGGT +
Preference number: 4 (lower is better)
Translates to: SAVLLLTGTRPHTLERLEPGKLR*RRRAKG
Trigger: ACCCTTTGCGCGCCGCCTGCAGCGCAGCTTCCCCGG...TTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAAAACTGCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000347755.10
CDS-3UTR GCA 90 bp GTGCAGTTTTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGCACAGGTGCAGCAGCTaGTGGCAGCCCCCGGGGTAC +
Preference number: 4 (lower is better)
Translates to: VQFCCSQGPVPTHWRDLKHRCSS*WQPPGY
Trigger: GTACCCCGGGGGCTGCCAGCAGCTGCTGCACCTGTG...CTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAAAACTGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
CDS-3UTR GCA 90 bp CACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGGTGCTGGACACACAGGTaGAGCAGCTGCTGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: HWRDLKVGALPIHWGISGCWTHR*SSCWQP
Trigger: GGGCTGCCAGCAGCTGCTGCACCTGTGTGTCCAGCA...CCCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
CDS-3UTR GCA 90 bp ACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCGCAAGAATTCCACCTaGAGCAGCTGCAGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: TGTRPHTLERLEGGGSAHRKNST*SSCRGC
Trigger: GCAGCCTCTGCAGCTGCTGCAGGTGGAATTCTTGCG...ATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
CDS-3UTR GCA 90 bp CTGGCCCCGCACAGCCTGAGCCTCCCGGTCCAGAGTGGTGGTCACGTATACCTCGAGGGTCCTCGTGAGTaGTCAGACGCAAGAATTCCA +
Preference number: 4 (lower is better)
Translates to: LAPHSLSLPVQSGGHVYLEGPRE*SDARIP
Trigger: TGGAATTCTTGCGTCTGAGCACTCACGAGGACCCTC...GAGGTATACGTGACCACCACTCTGGACCGGGAGGCTCAGGCTGTGCGGGGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
CDS-3UTR GCA 90 bp TGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGGCCAGCTGGGGGCAGCGTCTaGAGGCGGTTGTGTGTCACT +
Preference number: 4 (lower is better)
Translates to: WRDLKVGALPIHWGISGPAGGSV*RRLCVT
Trigger: AGTGACACACAACCGCCTGCAGACGCTGCCCCCAGC...TGGCCCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
CDS-3UTR GCA 90 bp TTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCCAGAGGCCAGGAGGTTaGTGTGCAGGACAAGGAGCC +
Preference number: 4 (lower is better)
Translates to: LLLTGTRPHTLERLEGGGQRPGG*CAGQGA
Trigger: GGCTCCTTGTCCTGCACAGCAACCTCCTGGCCTCTG...GCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
CDS-3UTR GCA 90 bp CTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGGCCCAGAGGCCAGGAGGTTaGTGTGCAGGACAAGGAGCC +
Preference number: 4 (lower is better)
Translates to: LERLEGGGSAHPLGNIWAQRPGG*CAGQGA
Trigger: GGCTCCTTGTCCTGCACAGCAACCTCCTGGCCTCTG...GGCCCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
CDS-3UTR GCA 90 bp AGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGGCCAGCCTACCAGAGCCGCTGGGGTaGCTCTTCCTCCAGGTAGGT +
Preference number: 4 (lower is better)
Translates to: RLEGGGSAHPLGNIWASLPEPLG*LFLQVG
Trigger: ACCTACCTGGAGGAAGAGGCACCCCAGCGGCTCTGG...TAGGCTGGCCCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp CACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGGGCCATGCGCACCACCTaGATGGAGACTCGACGAGGC +
Preference number: 4 (lower is better)
Translates to: HWRDLKVGALPIHWGISGAMRTT*METRRG
Trigger: GCCTCGTCGAGTCTCCATGCAGGTGGTGCGCATGGC...CCCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp AGGTTGCTCTGCGTCAGAAAGCCGGTCTCGGCATCTCCCAGATTCAAGGGTGCCGCCCAGTACAACAGGTaGAGGCGGGAGCGGTCCAGA +
Preference number: 4 (lower is better)
Translates to: RLLCVRKPVSASPRFKGAAQYNR*RRERSR
Trigger: TCTGGACCGCTCCCGCCTGCACCTGTTGTACTGGGC...GGCACCCTTGAATCTGGGAGATGCCGAGACCGGCTTTCTGACGCAGAGCAACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp AAACAGTGCAGTTTTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTCACTGCAGCAGGACCTaGTCAGGGTCCCGGCGCCGC +
Preference number: 4 (lower is better)
Translates to: KQCSFVAHRDPSPHTGETHCSRT*SGSRRR
Trigger: GCGGCGCCGGGACCCTGAGCAGGTCCTGCTGCAGTG...AGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAAAACTGCACTGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp CAAAGAACTCTTCGCCCTCGAACATCTCCACCGTGTCAGAGGGCTCGGGGCCCCCTCAGCAGGTTGCTCTaGGTCAGAAAGCCGGTCTCG +
Preference number: 4 (lower is better)
Translates to: QRTLRPRTSPPCQRARGPLSRLL*VRKPVS
Trigger: CGAGACCGGCTTTCTGACGCAGAGCAACCTGCTGAG...GGGGCCCCGAGCCCTCTGACACGGTGGAGATGTTCGAGGGCGAAGAGTTCTTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp ACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGCCACACTCAGCAGGTTaGTCTGCGTCAGAAAGCCGG +
Preference number: 4 (lower is better)
Translates to: TRPHTLERLEGGGSAHPLPHSAG*SASESR
Trigger: CCGGCTTTCTGACGCAGAGCAACCTGCTGAGTGTGG...CAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp TGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCACACTCAGCAGGTTaGTCTGCGTCAGAAAGCCGG +
Preference number: 4 (lower is better)
Translates to: CSQGPVPTHWRDLKVGALPHSAG*SASESR
Trigger: CCGGCTTTCTGACGCAGAGCAACCTGCTGAGTGTGG...CAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp TGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTTCTTCAGCCACGTCCTaGCGGTCACTCTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: CCSQGPVPTHWRDLKVGASSATS*RSLCSR
Trigger: CCTGGAGCAGAGTGACCGGCAGGACGTGGCTGAAGA...AGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp TGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTTGCTGTCCTGGTACTTaGGGCGGCCGAGCTCCAAGA +
Preference number: 4 (lower is better)
Translates to: CCSQGPVPTHWRDLKVGACCPGT*GGRAPR
Trigger: TCTTGGAGCTCGGCCGCCGCAAGTACCAGGACAGCA...AGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp CTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGGCCTGCTGTCCTGGTACTTaGGGCGGCCGAGCTCCAAGA +
Preference number: 4 (lower is better)
Translates to: LERLEGGGSAHPLGNIWACCPGT*GGRAPR
Trigger: TCTTGGAGCTCGGCCGCCGCAAGTACCAGGACAGCA...GGCCCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp TGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTAGCCCATGCGTCGGATaGTGTCCTGGTACTTGCGGC +
Preference number: 4 (lower is better)
Translates to: CCSQGPVPTHWRDLKVGASPCVG*CPGTCG
Trigger: GCCGCAAGTACCAGGACAGCATCCGACGCATGGGCT...AGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp CGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGACAGTGCAGTTTTGTTaGTCACAGGGACCCGTCCCC +
Preference number: 4 (lower is better)
Translates to: RPHTLERLEGGGSAHPLGTVQFC*SQGPVP
Trigger: GGGGACGGGTCCCTGTGAGCAACAAAACTGCACTGT...CCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CCA 90 bp TGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGGCCAGGAAAGGCAGCGCCCTaGACCCTGCGTCCGAATCCT +
Preference number: 4 (lower is better)
Translates to: WRDLKVGALPIHWGISGPGKAAP*TLRPNP
Trigger: AGGATTCGGACGCAGGGTCCAGGGCGCTGCCTTTCC...TGGCCCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
CDS-3UTR CCA 90 bp AGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGGCCAGCCTAGGAAAGGCAGCGCCCTaGACCCTGCGTCCGAATCCT +
Preference number: 4 (lower is better)
Translates to: RLEGGGSAHPLGNIWASLGKAAP*TLRPNP
Trigger: AGGATTCGGACGCAGGGTCCAGGGCGCTGCCTTTCC...TAGGCTGGCCCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
CDS-3UTR CCA 90 bp TGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGGCCACAGTGTCCCCTCCGGTaGCACCAGGCAGGCATTGGA +
Preference number: 4 (lower is better)
Translates to: WRDLKVGALPIHWGISGPQCPLR*HQAGIG
Trigger: TCCAATGCCTGCCTGGTGCCACCGGAGGGGACACTG...TGGCCCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CCA 90 bp TGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGGCCACCGGTTGGAGGAAGCTaGGGGGACCGCTCTGTGACA +
Preference number: 4 (lower is better)
Translates to: WRDLKVGALPIHWGISGPPVGGS*GDRSVT
Trigger: TGTCACAGAGCGGTCCCCCCAGCTTCCTCCAACCGG...TGGCCCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CCA 90 bp TGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTAAGCGTGCGTACAGGTaGGTGAGCTCCAGGACCACC +
Preference number: 4 (lower is better)
Translates to: CCSQGPVPTHWRDLKVGAKRAYR*VSSRTT
Trigger: GGTGGTCCTGGAGCTCACCCACCTGTACGCACGCTT...AGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000531286.5
CDS-3UTR CCA 90 bp GTGCAGTTTTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGCAGGGCCACGGCTaGCCAGTCCAGACCCAGACG +
Preference number: 4 (lower is better)
Translates to: VQFCCSQGPVPTHWRDLKVQGHG*PVQTQT
Trigger: CGTCTGGGTCTGGACTGGCCAGCCGTGGCCCTGCAC...CTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAAAACTGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CCA 90 bp GAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGGCCAGCTGGCCAATGGAGCCGTaGAGCTGCGAGGTCATAGGG +
Preference number: 4 (lower is better)
Translates to: ERLEGGGSAHPLGNIWASWPMEP*SCEVIG
Trigger: CCCTATGACCTCGCAGCTCCACGGCTCCATTGGCCA...GCTGGCCCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524486.5
CDS-3UTR CCA 90 bp GAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGGCCAGCGGACTCTGGATGGAGTaGGGAGCTCTAGAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: ERLEGGGSAHPLGNIWASGLWME*GALEPG
Trigger: GCCTGGCTCTAGAGCTCCCCACTCCATCCAGAGTCC...GCTGGCCCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
CDS-3UTR CCA 90 bp GGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCAGGGAAACAGGGACTCTaGATGGAGTGGGGAGCTCTA +
Preference number: 4 (lower is better)
Translates to: GTRPHTLERLEGGGSAHPGKQGL*MEWGAL
Trigger: TAGAGCTCCCCACTCCATCCAGAGTCCCTGTTTCCC...TGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
CDS-3UTR CCA 90 bp CAAAGAACTCTTCGCCCTCGAACATCTCCACCGTGTCAGAGGGCTCGGGGCCCCACCAAGAGGCAGCTGTaGACCAAGCCTGTGGGTGCA +
Preference number: 4 (lower is better)
Translates to: QRTLRPRTSPPCQRARGPTKRQL*TKPVGA
Trigger: TGCACCCACAGGCTTGGTCCACAGCTGCCTCTTGGT...GGGGCCCCGAGCCCTCTGACACGGTGGAGATGTTCGAGGGCGAAGAGTTCTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524486.5
CDS-3UTR CCA 90 bp GCATCCACGTCGATGCCGCGCTCGAAGGCCGCAAAGAACTCTTCGCCCTCGAACCAAAGGCCAGGGAGGTaGAGGGACAACCAAGAGGCA +
Preference number: 4 (lower is better)
Translates to: ASTSMPRSKAAKNSSPSNQRPGR*RDNQEA
Trigger: TGCCTCTTGGTTGTCCCTCCACCTCCCTGGCCTTTG...GTTCGAGGGCGAAGAGTTCTTTGCGGCCTTCGAGCGCGGCATCGACGTGGATGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524486.5
CDS-3UTR CCA 90 bp GCTGTCCTGGTACTTGCGGCGGCCGAGCTCCAAGACTGCGCGCACCTCTTCAGCACTCTCCTCCACAGCTaGGCTCAGAGAACTCTGACA +
Preference number: 4 (lower is better)
Translates to: AVLVLAAAELQDCAHLFSTLLHS*AQRTLT
Trigger: TGTCAGAGTTCTCTGAGCCCAGCTGTGGAGGAGAGT...GCTGAAGAGGTGCGCGCAGTCTTGGAGCTCGGCCGCCGCAAGTACCAGGACAGC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524486.5
CDS-3UTR CCA 90 bp GGCCAGCCATGCGCACCACCTGCATGGAGACTCGACGAGGCTCCTCAGTGGCCCCCACACAGTTCTTGGTaGTGTACCAGAGCCAGTACA +
Preference number: 4 (lower is better)
Translates to: GQPCAPPAWRLDEAPQWPPHSSW*CTRAST
Trigger: TGTACTGGCTCTGGTACACCACCAAGAACTGTGTGG...GGGCCACTGAGGAGCCTCGTCGAGTCTCCATGCAGGTGGTGCGCATGGCTGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525028.6
CDS-3UTR TCA 90 bp CGAAGGCCGCAAAGAACTCTTCGCCCTCGAACATCTCCACCGTGTCAGAGGGCTTGCGTCCGAATCCTCTaGAGCATCTCCTGCGGCAGC +
Preference number: 4 (lower is better)
Translates to: RRPQRTLRPRTSPPCQRACVRIL*SISCGS
Trigger: GCTGCCGCAGGAGATGCTTCAGAGGATTCGGACGCA...AGCCCTCTGACACGGTGGAGATGTTCGAGGGCGAAGAGTTCTTTGCGGCCTTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
CDS-3UTR TCA 90 bp CACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGGGTGTCTCCAGGCTGTTaGAGCTCAGGTCCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: HWRDLKVGALPIHWGISGVSPGC*SSGPGG
Trigger: CCCACCTGGACCTGAGCTTCAACAGCCTGGAGACAC...CCCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
CDS-3UTR TCA 90 bp AGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGGCCAGCCGTGTCCAGCAGATTCTaGGAGAGATCGAGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: RDLKVGALPIHWGISGPAVSSRF*ERSRRC
Trigger: GCAGCGCCTCGATCTCTCTCAGAATCTGCTGGACAC...GGCTGGCCCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
CDS-3UTR TCA 90 bp AGTGCAGTTTTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAATCAGGTCGAGCCGGGTaGGGAGTGGAAGGCGGGCCA +
Preference number: 4 (lower is better)
Translates to: SAVLLLTGTRPHTLERLESGRAG*GVEGGP
Trigger: TGGCCCGCCTTCCACTCCTCACCCGGCTCGACCTGA...TTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAAAACTGCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
CDS-3UTR TCA 90 bp ACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATTGGGCATTTCTGGAATaGGGGCTGCCACTGGTGAAC +
Preference number: 4 (lower is better)
Translates to: TGTRPHTLERLEGGGSAHWAFLE*GLPLVN
Trigger: GTTCACCAGTGGCAGCCCTCATTCCAGAAATGCCCA...ATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR TCA 90 bp GCCAAGCCCATGCGTCGGATGCTGTCCTGGTACTTGCGGCGGCCGAGCTCCAAGAAAGCTGTCCAAATCTaGGGTCAGGAACAGTCTGGG +
Preference number: 4 (lower is better)
Translates to: AKPMRRMLSWYLRRPSSKKAVQI*GQEQSG
Trigger: CCCAGACTGTTCCTGACCTCAGATTTGGACAGCTTT...CTTGGAGCTCGGCCGCCGCAAGTACCAGGACAGCATCCGACGCATGGGCTTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR TCA 90 bp AGTGCAGTTTTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAACTGAGCAGGGCGTCATaGGGACCCAGGGGGACGAGG +
Preference number: 4 (lower is better)
Translates to: SAVLLLTGTRPHTLERLELSRAS*GPRGTR
Trigger: CCTCGTCCCCCTGGGTCCTCATGACGCCCTGCTCAG...TTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAAAACTGCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR TCA 90 bp AGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGGCCAGCCTATGTCATTCCGGGTCCTaGCCACCACTTCACGGCAGC +
Preference number: 4 (lower is better)
Translates to: RLEGGGSAHPLGNIWASLCHSGS*PPLHGS
Trigger: GCTGCCGTGAAGTGGTGGTCAGGACCCGGAATGACA...TAGGCTGGCCCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR TCA 90 bp CACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGGCACACTGGAGAGACTTaGAGGTGGGGGCTCTGCCCA +
Preference number: 4 (lower is better)
Translates to: HWRDLKVGALPIHWGISGHTGET*RWGLCP
Trigger: TGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTG...CCCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp CACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGGTCCACCTGCAGCAGCTaGAGAGGCTGCTGGACACAC +
Preference number: 4 (lower is better)
Translates to: HWRDLKVGALPIHWGISGSTCSS*RGCWTH
Trigger: GTGTGTCCAGCAGCCTCTGCAGCTGCTGCAGGTGGA...CCCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
CDS-3UTR GCA 90 bp TGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGGCCAAGTGTGTCCCGGCGTTaGCCTCCTTTGAGGACCAGG +
Preference number: 4 (lower is better)
Translates to: WRDLKVGALPIHWGISGPSVSRR*PPLRTR
Trigger: CCTGGTCCTCAAAGGAGGGCAACGCCGGGACACACT...TGGCCCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000347755.10
ENST00000411829.6
CDS-3UTR GCA 90 bp ACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGGCTGGGGGCAGCGTCTaGAGGCGGTTGTGTGTCACT +
Preference number: 4 (lower is better)
Translates to: TLERLEGGGSAHPLGNIWAGGSV*RRLCVT
Trigger: AGTGACACACAACCGCCTGCAGACGCTGCCCCCAGC...CCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
CDS-3UTR GCA 90 bp AAACAGTGCAGTTTTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTGAGGCTGGGAGGCTCTaGAGCCGGTTGGAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: KQCSFVAHRDPSPHTGETEAGRL*SRLEAR
Trigger: CCTGGCCTCCAACCGGCTGCAGAGCCTCCCAGCCTC...AGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAAAACTGCACTGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
CDS-3UTR GCA 90 bp TGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGGCCAGCCAGGAGGTTGCTGTaGAGGACAAGGAGCCGCAAG +
Preference number: 4 (lower is better)
Translates to: WRDLKVGALPIHWGISGPARRLL*RTRSRK
Trigger: CTTGCGGCTCCTTGTCCTGCACAGCAACCTCCTGGC...TGGCCCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
CDS-3UTR GCA 90 bp TTTTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCCATGCGCACCACCTaGATGGAGACTCGACGAGGC +
Preference number: 4 (lower is better)
Translates to: FCCSQGPVPTHWRDLKVGAMRTT*METRRG
Trigger: GCCTCGTCGAGTCTCCATGCAGGTGGTGCGCATGGC...CCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp TTTTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGCAGCAGGGGGCTCACTaGAGCCTCTGGTTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: FCCSQGPVPTHWRDLKVGQQGAH*SLWFSQ
Trigger: CTGGGAGAACCAGAGGCTGCAGTGAGCCCCCTGCTG...CCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp GTTTTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGCCCAGTACAACAGGTaGAGGCGGGAGCGGTCCAGA +
Preference number: 4 (lower is better)
Translates to: VLLLTGTRPHTLERLEGGAQYNR*RRERSR
Trigger: TCTGGACCGCTCCCGCCTGCACCTGTTGTACTGGGC...CCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp CACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGGGTCATCCCAGGTGGCTaGAGGAGGGGCCCAGTACAA +
Preference number: 4 (lower is better)
Translates to: HWRDLKVGALPIHWGISGVIPGG*RRGPVQ
Trigger: TTGTACTGGGCCCCTCCTGCAGCCACCTGGGATGAC...CCCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp GCAGGTTGCTCTGCGTCAGAAAGCCGGTCTCGGCATCTCCCAGATTCAAGGGTGGTCATCCCAGGTGGCTaGAGGAGGGGCCCAGTACAA +
Preference number: 4 (lower is better)
Translates to: AGCSASESRSRHLPDSRVVIPGG*RRGPVQ
Trigger: TTGTACTGGGCCCCTCCTGCAGCCACCTGGGATGAC...CACCCTTGAATCTGGGAGATGCCGAGACCGGCTTTCTGACGCAGAGCAACCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp ACAGTGCAGTTTTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGGGGTCCCGGCGCCGCTaGAGAGCGATGAGGTTCACA +
Preference number: 4 (lower is better)
Translates to: TVQFCCSQGPVPTHWRDLGSRRR*RAMRFT
Trigger: TGTGAACCTCATCGCTCTGCAGCGGCGCCGGGACCC...CAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAAAACTGCACTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp TTTTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGTTTCGGGGCAGGCACTaGAGCAGGACCTGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: FCCSQGPVPTHWRDLKVGFRGRH*SRTCSG
Trigger: CCCTGAGCAGGTCCTGCTGCAGTGCCTGCCCCGAAA...CCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp AGAGCGGGGTCCTTGGGGGCCAAGCCCATGCGTCGGATGCTGTCCTGGTACTTGAGACAAAGCAGATTCTaGCCTCCACACAGTCAGGGC +
Preference number: 4 (lower is better)
Translates to: RAGSLGAKPMRRMLSWYLRQSRF*PPHSQG
Trigger: GCCCTGACTGTGTGGAGGGCAGAATCTGCTTTGTCT...CAAGTACCAGGACAGCATCCGACGCATGGGCTTGGCCCCCAAGGACCCCGCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp AGTGCAGTTTTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAACATCCACAGGGCGTCTaGGCCCTTCCTCTGCCGGGC +
Preference number: 4 (lower is better)
Translates to: SAVLLLTGTRPHTLERLEHPQGV*ALPLPG
Trigger: GCCCGGCAGAGGAAGGGCGCAGACGCCCTGTGGATG...TTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAAAACTGCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp TGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGGCCATCCCAGATTCAAGGGTaGCAAGGAGAGGCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: WRDLKVGALPIHWGISGPSQIQG*QGEASP
Trigger: GGGGCTGGCCTCTCCTTGGCACCCTTGAATCTGGGA...TGGCCCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp TGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCCACACTCAGCAGGTTaGTCTGCGTCAGAAAGCCGG +
Preference number: 4 (lower is better)
Translates to: CCSQGPVPTHWRDLKVGAPHSAG*SASESR
Trigger: CCGGCTTTCTGACGCAGAGCAACCTGCTGAGTGTGG...AGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp TTTTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGTCATCCCGGAACTCGTaGCGGATGCGCTGCACCTCC +
Preference number: 4 (lower is better)
Translates to: FCCSQGPVPTHWRDLKVGSSRNS*RMRCTS
Trigger: GGAGGTGCAGCGCATCCGGCACGAGTTCCGGGATGA...CCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp CACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGGTCTTCAGCCACGTCCTaGCGGTCACTCTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: HWRDLKVGALPIHWGISGSSATS*RSLCSR
Trigger: CCTGGAGCAGAGTGACCGGCAGGACGTGGCTGAAGA...CCCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp GCTCGAAGGCCGCAAAGAACTCTTCGCCCTCGAACATCTCCACCGTGTCAGAGGAGCCCATGCGTCGGATaGTGTCCTGGTACTTGCGGC +
Preference number: 4 (lower is better)
Translates to: ARRPQRTLRPRTSPPCQRSPCVG*CPGTCG
Trigger: GCCGCAAGTACCAGGACAGCATCCGACGCATGGGCT...CCTCTGACACGGTGGAGATGTTCGAGGGCGAAGAGTTCTTTGCGGCCTTCGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp ACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGACAGTGCAGTTTTGTTaGTCACAGGGACCCGTCCCC +
Preference number: 4 (lower is better)
Translates to: TRPHTLERLEGGGSAHPLTVQFC*SQGPVP
Trigger: GGGGACGGGTCCCTGTGAGCAACAAAACTGCACTGT...CAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp ACAGTGCAGTTTTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGCTGGGACACTCCTGCTaGCGCCTCCCAGAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: TVQFCCSQGPVPTHWRDLLGHSC*RLPEQL
Trigger: CAGCTGCTCTGGGAGGCGGCAGCAGGAGTGTCCCAG...CAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAAAACTGCACTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524486.5
CDS-3UTR GCA 90 bp CCGCACAGGCACCGCGCCACGGTAGAAGGACACCTCCTTCACATTCTTCAGGTGCAGTACCTGGAAGCGTaGGTACAGGTGGGTGAGCTC +
Preference number: 4 (lower is better)
Translates to: PHRHRATVEGHLLHILQVQYLEA*VQVGEL
Trigger: GAGCTCACCCACCTGTACGCACGCTTCCAGGTACTG...CACCTGAAGAATGTGAAGGAGGTGTCCTTCTACCGTGGCGCGGTGCCTGTGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531286.5
CDS-3UTR CCA 90 bp AGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGGCCAGCCTAAGCTGCAGAGGCTGCTaGACACACAGGTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: RLEGGGSAHPLGNIWASLSCRGC*THRCSS
Trigger: GCTGCTGCACCTGTGTGTCCAGCAGCCTCTGCAGCT...TAGGCTGGCCCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
CDS-3UTR CCA 90 bp AACAGTGCAGTTTTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTCGAGGCGCTGCAGGGTaGATAGGGCCCCCAGTGCTG +
Preference number: 4 (lower is better)
Translates to: NSAVLLLTGTRPHTLERLRGAAG*IGPPVL
Trigger: CAGCACTGGGGGCCCTATCCACCCTGCAGCGCCTCG...AAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAAAACTGCACTGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
CDS-3UTR CCA 90 bp ACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGGCGGGCCAAGTCAGCTaGCACAGAGGCCAGGAGGTT +
Preference number: 4 (lower is better)
Translates to: TLERLEGGGSAHPLGNIWAGQVS*HRGQEV
Trigger: AACCTCCTGGCCTCTGTGCCAGCTGACTTGGCCCGC...CCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
CDS-3UTR CCA 90 bp ACAGTGCAGTTTTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGGAGCCGGGTGAGGAGTaGAAGGCGGGCCAAGTCAGC +
Preference number: 4 (lower is better)
Translates to: TVQFCCSQGPVPTHWRDLEPGEE*KAGQVS
Trigger: GCTGACTTGGCCCGCCTTCCACTCCTCACCCGGCTC...CAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAAAACTGCACTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
CDS-3UTR CCA 90 bp ACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCAGTCTGGGCATTTCTaGAATGAGGGCTGCCACTGG +
Preference number: 4 (lower is better)
Translates to: TGTRPHTLERLEGGGSAHQSGHF*NEGCHW
Trigger: CCAGTGGCAGCCCTCATTCCAGAAATGCCCAGACTG...ATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CCA 90 bp CACATTCTTCAGGTGCGAGTAGAAGACAAAGCAGATTCTGCCCTCCACACAGTCGGCGGTGGCTCCCGCTaGGAACTGCAGGCGGACGCC +
Preference number: 4 (lower is better)
Translates to: HILQVRVEDKADSALHTVGGGSR*ELQADA
Trigger: GGCGTCCGCCTGCAGTTCCCAGCGGGAGCCACCGCC...GACTGTGTGGAGGGCAGAATCTGCTTTGTCTTCTACTCGCACCTGAAGAATGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CCA 90 bp GTTGCTCTGCGTCAGAAAGCCGGTCTCGGCATCTCCCAGATTCAAGGGTGCCAATGGAAGGCCACCCCATaGGGCTGCAGCTCCAGCACA +
Preference number: 4 (lower is better)
Translates to: VALRQKAGLGISQIQGCQWKATP*GCSSST
Trigger: TGTGCTGGAGCTGCAGCCCCATGGGGTGGCCTTCCA...TTGGCACCCTTGAATCTGGGAGATGCCGAGACCGGCTTTCTGACGCAGAGCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CCA 90 bp CACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGGTGCGCACCACCTGCATaGAGACTCGACGAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: HWRDLKVGALPIHWGISGCAPPA*RLDEAP
Trigger: AGGAGCCTCGTCGAGTCTCCATGCAGGTGGTGCGCA...CCCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CCA 90 bp TGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGGAGAAGTGTGTGACCTaGAAGCGTGCGTACAGGTGG +
Preference number: 4 (lower is better)
Translates to: CSQGPVPTHWRDLKVGALEKCVT*KRAYRW
Trigger: CCACCTGTACGCACGCTTCCAGGTCACACACTTCTC...CAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
CDS-3UTR CCA 90 bp TCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCCTCCCACACAGTTCTTaGTGGTGTACCAGAGCCAGT +
Preference number: 4 (lower is better)
Translates to: SQGPVPTHWRDLKVGALPLPHSS*WCTRAS
Trigger: ACTGGCTCTGGTACACCACCAAGAACTGTGTGGGAG...GGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CCA 90 bp GTCAGCATCCACGTCGATGCCGCGCTCGAAGGCCGCAAAGAACTCTTCGCCCTCCCCGGTCCAGAGTGGTaGTCACGTATACCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: VSIHVDAALEGRKELFALPGPEW*SRIPPS
Trigger: TGAAGGAGGTATACGTGACCACCACTCTGGACCGGG...GAGGGCGAAGAGTTCTTTGCGGCCTTCGAGCGCGGCATCGACGTGGATGCTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
CDS-3UTR CCA 90 bp ACAGTGCAGTTTTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGCGTCGGATGCTGTCCTaGTACTTGCGGCGGCCGAGC +
Preference number: 4 (lower is better)
Translates to: TVQFCCSQGPVPTHWRDLRRMLS*YLRRPS
Trigger: GCTCGGCCGCCGCAAGTACCAGGACAGCATCCGACG...CAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAAAACTGCACTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CCA 90 bp GCTCGAAGGCCGCAAAGAACTCTTCGCCCTCGAACATCTCCACCGTGTCAGAGGCCCGTCCCCACACACTaGAGAGACTTGAAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: ARRPQRTLRPRTSPPCQRPVPTH*RDLKVG
Trigger: CCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGG...CCTCTGACACGGTGGAGATGTTCGAGGGCGAAGAGTTCTTTGCGGCCTTCGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CCA 90 bp CCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGTGAGGCTTCAGTCCTaGTCCTGGAAATCTGGCCAA +
Preference number: 4 (lower is better)
Translates to: PVPTHWRDLKVGALPIHWVRLQS*SWKSGQ
Trigger: TTGGCCAGATTTCCAGGACCAGGACTGAAGCCTCAC...CCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524486.5
CDS-3UTR CCA 90 bp GATGCCGCGCTCGAAGGCCGCAAAGAACTCTTCGCCCTCGAACATCTCCACCGTGGCCTGGGTCACCACTaGAAAGAGGGTTGGGGAATG +
Preference number: 4 (lower is better)
Translates to: DAALEGRKELFALEHLHRGLGHH*KEGWGM
Trigger: CATTCCCCAACCCTCTTTCCAGTGGTGACCCAGGCC...ACGGTGGAGATGTTCGAGGGCGAAGAGTTCTTTGCGGCCTTCGAGCGCGGCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
CDS-3UTR CCA 90 bp TCCACGTCGATGCCGCGCTCGAAGGCCGCAAAGAACTCTTCGCCCTCGAACATCGGCCTGGGTCACCACTaGAAAGAGGGTTGGGGAATG +
Preference number: 4 (lower is better)
Translates to: STSMPRSKAAKNSSPSNIGLGHH*KEGWGM
Trigger: CATTCCCCAACCCTCTTTCCAGTGGTGACCCAGGCC...GATGTTCGAGGGCGAAGAGTTCTTTGCGGCCTTCGAGCGCGGCATCGACGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
3UTR CAA 72 bp TCCCAGGCCTTCCGAGCCAGGCCTCCCACACAGTTCTaGGTGGTGTACCAGAGCCAGTACCAGGAGAAGTGT +
Preference number: 4 (lower is better)
Translates to: SQAFRARPPTQF*VVYQSQYQEKC
Trigger: ACACTTCTCCTGGTACTGGCTCTGGTACACCACCAAGAACTGTGTGGGAGGCCTGGCTCGGAAGGCCTGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524486.5
CDS-3UTR TCA 90 bp TGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTTGGGCATTTCTGGAATaGGGGCTGCCACTGGTGAAC +
Preference number: 4 (lower is better)
Translates to: CCSQGPVPTHWRDLKVGAWAFLE*GLPLVN
Trigger: GTTCACCAGTGGCAGCCCTCATTCCAGAAATGCCCA...AGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR TCA 90 bp CACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGGACTTTGACCCCAGGATaGCCCGAGGAGCACAGCAGT +
Preference number: 4 (lower is better)
Translates to: HWRDLKVGALPIHWGISGTLTPG*PEEHSS
Trigger: ACTGCTGTGCTCCTCGGGTCATCCTGGGGTCAAAGT...CCCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR TCA 90 bp TTTTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGGACCACCTGAGCTGTaGTGTCATCCCAGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: FCCSQGPVPTHWRDLKVGGPPEL*CHPRWL
Trigger: CAGCCACCTGGGATGACATCACAGCTCAGGTGGTCC...CCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAAAA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR TCA 90 bp AGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGGCCAGCCACCAGGAGAAGTGTGTaGCCTGGAAGCGTGCGTACA +
Preference number: 4 (lower is better)
Translates to: RDLKVGALPIHWGISGPATRRSV*PGSVRT
Trigger: TGTACGCACGCTTCCAGGTCACACACTTCTCCTGGT...GGCTGGCCCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
CDS-3UTR TCA 90 bp ACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCAGGAGAAGAGCATGTaGCGGATCTGCTCATCCAGA +
Preference number: 4 (lower is better)
Translates to: TGTRPHTLERLEGGGSAHQEKSM*RICSSR
Trigger: TCTGGATGAGCAGATCCGTCACATGCTCTTCTCCTG...ATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR TCA 90 bp ACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGCAGGAGAAGAGCATGTaGCGGATCTGCTCATCCAGA +
Preference number: 4 (lower is better)
Translates to: TRPHTLERLEGGGSAHPLQEKSM*RICSSR
Trigger: TCTGGATGAGCAGATCCGTCACATGCTCTTCTCCTG...CAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR TCA 90 bp CATCCAGATCATCCCGGAACTCGTGCCGGATGCGCTGCACCTCCCGGTAGGACACAGGAGAAGAGCATGTaGCGGATCTGCTCATCCAGA +
Preference number: 4 (lower is better)
Translates to: HPDHPGTRAGCAAPPGRTQEKSM*RICSSR
Trigger: TCTGGATGAGCAGATCCGTCACATGCTCTTCTCCTG...TGTCCTACCGGGAGGTGCAGCGCATCCGGCACGAGTTCCGGGATGATCTGGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp ACAGTGCAGTTTTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGCCCAGACCTCGCATCTaGAGGACACAGGCCGGCAGT +
Preference number: 4 (lower is better)
Translates to: TVQFCCSQGPVPTHWRDLPRPRI*RTQAGS
Trigger: ACTGCCGGCCTGTGTCCTGCAGATGCGAGGTCTGGG...CAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAAAACTGCACTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
CDS-3UTR GCA 90 bp ACAGTGCAGTTTTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGGCTGGGGGCAGCGTCTaGAGGCGGTTGTGTGTCACT +
Preference number: 4 (lower is better)
Translates to: TVQFCCSQGPVPTHWRDLAGGSV*RRLCVT
Trigger: AGTGACACACAACCGCCTGCAGACGCTGCCCCCAGC...CAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAAAACTGCACTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
CDS-3UTR GCA 90 bp CTCAGCCCAGGAGAAGAGCATGTGACGGATCTGCTCATCCAGATCATCCCGGAAGCTGGGGGCAGCGTCTaGAGGCGGTTGTGTGTCACT +
Preference number: 4 (lower is better)
Translates to: LSPGEEHVTDLLIQIIPEAGGSV*RRLCVT
Trigger: AGTGACACACAACCGCCTGCAGACGCTGCCCCCAGC...TTCCGGGATGATCTGGATGAGCAGATCCGTCACATGCTCTTCTCCTGGGCTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
CDS-3UTR GCA 90 bp AGTGCAGTTTTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGAGGGCAGAGGCAGCTaGACGGTGACCGGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: SAVLLLTGTRPHTLERLEEGRGS*TVTGWR
Trigger: CCTCCAACCGGTCACCGTGCAGCTGCCTCTGCCCTC...TTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAAAACTGCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp AACAGTGCAGTTTTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGGGTCCCGGCGCCGCTaGAGAGCGATGAGGTTCACA +
Preference number: 4 (lower is better)
Translates to: NSAVLLLTGTRPHTLERLGSRRR*RAMRFT
Trigger: TGTGAACCTCATCGCTCTGCAGCGGCGCCGGGACCC...AAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAAAACTGCACTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp AGTGCAGTTTTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGAACTCGTGCCGGATaGGCTGCACCTCCCGGTAGG +
Preference number: 4 (lower is better)
Translates to: SAVLLLTGTRPHTLERLEGTRAG*AAPPGR
Trigger: CCTACCGGGAGGTGCAGCGCATCCGGCACGAGTTCC...TTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAAAACTGCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp AAACAGTGCAGTTTTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTGGAACTCGTGCCGGATaGGCTGCACCTCCCGGTAGG +
Preference number: 4 (lower is better)
Translates to: KQCSFVAHRDPSPHTGETGTRAG*AAPPGR
Trigger: CCTACCGGGAGGTGCAGCGCATCCGGCACGAGTTCC...AGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAAAACTGCACTGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp ACAGTGCAGTTTTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGTCATCCCGGAACTCGTaGCGGATGCGCTGCACCTCC +
Preference number: 4 (lower is better)
Translates to: TVQFCCSQGPVPTHWRDLSSRNS*RMRCTS
Trigger: GGAGGTGCAGCGCATCCGGCACGAGTTCCGGGATGA...CAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAAAACTGCACTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp ACTCAGCAGGTTGCTCTGCGTCAGAAAGCCGGTCTCGGCATCTCCCAGATTCAATCATCCCGGAACTCGTaGCGGATGCGCTGCACCTCC +
Preference number: 4 (lower is better)
Translates to: TQQVALRQKAGLGISQIQSSRNS*RMRCTS
Trigger: GGAGGTGCAGCGCATCCGGCACGAGTTCCGGGATGA...TTGAATCTGGGAGATGCCGAGACCGGCTTTCTGACGCAGAGCAACCTGCTGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp AACAGTGCAGTTTTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTTCCTGCCGGTCACTCTaGTCCAGGGCCTGCACCAGG +
Preference number: 4 (lower is better)
Translates to: NSAVLLLTGTRPHTLERLSCRSL*SRACTR
Trigger: CCTGGTGCAGGCCCTGGAGCAGAGTGACCGGCAGGA...AAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAAAACTGCACTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp GTTGCTCTGCGTCAGAAAGCCGGTCTCGGCATCTCCCAGATTCAAGGGTGCCAATCTTCAGCCACGTCCTaGCGGTCACTCTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: VALRQKAGLGISQIQGCQSSATS*RSLCSR
Trigger: CCTGGAGCAGAGTGACCGGCAGGACGTGGCTGAAGA...TTGGCACCCTTGAATCTGGGAGATGCCGAGACCGGCTTTCTGACGCAGAGCAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp CTCAGCCCAGGAGAAGAGCATGTGACGGATCTGCTCATCCAGATCATCCCGGAAGCCGAGCTCCAAGACTaGGCGCACCTCTTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: LSPGEEHVTDLLIQIIPEAELQD*AHLFSH
Trigger: GTGGCTGAAGAGGTGCGCGCAGTCTTGGAGCTCGGC...TTCCGGGATGATCTGGATGAGCAGATCCGTCACATGCTCTTCTCCTGGGCTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp TTTTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGTGCTGTCCTGGTACTTaGGGCGGCCGAGCTCCAAGA +
Preference number: 4 (lower is better)
Translates to: FCCSQGPVPTHWRDLKVGCCPGT*GGRAPR
Trigger: TCTTGGAGCTCGGCCGCCGCAAGTACCAGGACAGCA...CCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp GTTGCTCTGCGTCAGAAAGCCGGTCTCGGCATCTCCCAGATTCAAGGGTGCCAATGCTGTCCTGGTACTTaGGGCGGCCGAGCTCCAAGA +
Preference number: 4 (lower is better)
Translates to: VALRQKAGLGISQIQGCQCCPGT*GGRAPR
Trigger: TCTTGGAGCTCGGCCGCCGCAAGTACCAGGACAGCA...TTGGCACCCTTGAATCTGGGAGATGCCGAGACCGGCTTTCTGACGCAGAGCAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp GTGCAGTTTTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGTGGGGGCCAAGCCCATaGGTCGGATGCTGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: VQFCCSQGPVPTHWRDLKWGPSP*VGCCPG
Trigger: ACCAGGACAGCATCCGACGCATGGGCTTGGCCCCCA...CTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAAAACTGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp TTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCACAGTGCAGTTTTGTTaGTCACAGGGACCCGTCCCC +
Preference number: 4 (lower is better)
Translates to: LLLTGTRPHTLERLEGGGTVQFC*SQGPVP
Trigger: GGGGACGGGTCCCTGTGAGCAACAAAACTGCACTGT...GCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp TGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTACAGTGCAGTTTTGTTaGTCACAGGGACCCGTCCCC +
Preference number: 4 (lower is better)
Translates to: CCSQGPVPTHWRDLKVGATVQFC*SQGPVP
Trigger: GGGGACGGGTCCCTGTGAGCAACAAAACTGCACTGT...AGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CCA 90 bp ACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGAGCTGCAGAGGCTGCTaGACACACAGGTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: TLERLEGGGSAHPLGNIWSCRGC*THRCSS
Trigger: GCTGCTGCACCTGTGTGTCCAGCAGCCTCTGCAGCT...CCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
CDS-3UTR CCA 90 bp AGTGCAGTTTTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGCAGGTCCCGGAGCTaGTTGTCCCTCAGGTCGAGC +
Preference number: 4 (lower is better)
Translates to: SAVLLLTGTRPHTLERLEGRSRS*LSLRSS
Trigger: GCTCGACCTGAGGGACAACCAGCTCCGGGACCTGCC...TTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAAAACTGCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
CDS-3UTR CCA 90 bp CTCAGCCCAGGAGAAGAGCATGTGACGGATCTGCTCATCCAGATCATCCCGGAATGGAAGGCCACCCCATaGGGCTGCAGCTCCAGCACA +
Preference number: 4 (lower is better)
Translates to: LSPGEEHVTDLLIQIIPEWKATP*GCSSST
Trigger: TGTGCTGGAGCTGCAGCCCCATGGGGTGGCCTTCCA...TTCCGGGATGATCTGGATGAGCAGATCCGTCACATGCTCTTCTCCTGGGCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CCA 90 bp GAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGGCCAGCGAGAAGTGTGTGACCTaGAAGCGTGCGTACAGGTGG +
Preference number: 4 (lower is better)
Translates to: ERLEGGGSAHPLGNIWASEKCVT*KRAYRW
Trigger: CCACCTGTACGCACGCTTCCAGGTCACACACTTCTC...GCTGGCCCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
CDS-3UTR CCA 90 bp CTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGGCCGAGAAGTGTGTGACCTaGAAGCGTGCGTACAGGTGG +
Preference number: 4 (lower is better)
Translates to: LERLEGGGSAHPLGNIWAEKCVT*KRAYRW
Trigger: CCACCTGTACGCACGCTTCCAGGTCACACACTTCTC...GGCCCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
CDS-3UTR CCA 90 bp AGTGCAGTTTTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGCAGCCGCCGAAGGGTaGCGTCCACCTTGTTTCGGG +
Preference number: 4 (lower is better)
Translates to: SAVLLLTGTRPHTLERLEAAAEG*RPPCFG
Trigger: CCCGAAACAAGGTGGACGCCACCCTTCGGCGGCTGC...TTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAAAACTGCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CCA 90 bp TTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCCCCGGTCCAGAGTGGTaGTCACGTATACCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: LLLTGTRPHTLERLEGGGPGPEW*SRIPPS
Trigger: TGAAGGAGGTATACGTGACCACCACTCTGGACCGGG...GCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347755.10
ENST00000524486.5
ENST00000525028.6
CDS-3UTR CCA 90 bp AGTGCAGTTTTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAACGTCGGATGCTGTCCTaGTACTTGCGGCGGCCGAGC +
Preference number: 4 (lower is better)
Translates to: SAVLLLTGTRPHTLERLERRMLS*YLRRPS
Trigger: GCTCGGCCGCCGCAAGTACCAGGACAGCATCCGACG...TTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAAAACTGCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CCA 90 bp CGCCACGGTAGAAGGACACCTCCTTCACATTCTTCAGGTGCGAGTAGAAGACAAGCAGAGCGGGGTCCTTaGGGGCCAAGCCCATGCGTC +
Preference number: 4 (lower is better)
Translates to: RHGRRTPPSHSSGASRRQAERGP*GPSPCV
Trigger: GACGCATGGGCTTGGCCCCCAAGGACCCCGCTCTGC...TTGTCTTCTACTCGCACCTGAAGAATGTGAAGGAGGTGTCCTTCTACCGTGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531286.5
CDS-3UTR CCA 90 bp TTTTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGCAGCCTAAAAGTCTGTaGGGCCTAGGCCTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: FCCSQGPVPTHWRDLKVGQPKSL*GLGLGR
Trigger: CCTGCCCAGGCCTAGGCCCCACAGACTTTTAGGCTG...CCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CCA 90 bp GTTTTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGCCCGTCCCCACACACTaGAGAGACTTGAAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: VLLLTGTRPHTLERLEGGPVPTH*RDLKVG
Trigger: CCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGG...CCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CCA 90 bp GACGCCCAGCCACACTCAGCAGGTTGCTCTGCGTCAGAAAGCCGGTCTCGGCATCTTCAGTCCTGGTCCTaGAAATCTGGCCAATGGAGC +
Preference number: 4 (lower is better)
Translates to: DAQPHSAGCSASESRSRHLQSWS*KSGQWS
Trigger: GCTCCATTGGCCAGATTTCCAGGACCAGGACTGAAG...ATGCCGAGACCGGCTTTCTGACGCAGAGCAACCTGCTGAGTGTGGCTGGGCGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524486.5
CDS-3UTR CCA 90 bp AGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGGCCAGCCTACACTGGAAAGAGGGTTaGGGAATGGGACCGCCATGG +
Preference number: 4 (lower is better)
Translates to: RLEGGGSAHPLGNIWASLHWKEG*GMGPPW
Trigger: CCATGGCGGTCCCATTCCCCAACCCTCTTTCCAGTG...TAGGCTGGCCCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
CDS-3UTR CCA 90 bp ACTCAGCAGGTTGCTCTGCGTCAGAAAGCCGGTCTCGGCATCTCCCAGATTCAAGCCTGGGCTGCAGAGTaGGGGAGACCTTGTGGTCAC +
Preference number: 4 (lower is better)
Translates to: TQQVALRQKAGLGISQIQAWAAE*GRPCGH
Trigger: GTGACCACAAGGTCTCCCCCACTCTGCAGCCCAGGC...TTGAATCTGGGAGATGCCGAGACCGGCTTTCTGACGCAGAGCAACCTGCTGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
CDS-3UTR CCA 90 bp CTTGAGGGGTCACAGGAAAGCTGTCCAAATCTGAGGTCAGGAACAGTCTGGGCAGAGCGGGAGCCGGGGTaGGCCCTTCTCTTTGGGGAA +
Preference number: 4 (lower is better)
Translates to: LEGSQESCPNLRSGTVWAEREPG*ALLFGE
Trigger: TTCCCCAAAGAGAAGGGCCCACCCCGGCTCCCGCTC...TGCCCAGACTGTTCCTGACCTCAGATTTGGACAGCTTTCCTGTGACCCCTCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
CDS-3UTR CCA 90 bp ACAGTGCAGTTTTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGGCTGCGGGCAGTTGCTaGCTTAGGCTTGGCACCAGC +
Preference number: 4 (lower is better)
Translates to: TVQFCCSQGPVPTHWRDLAAGSC*LRLGTS
Trigger: GCTGGTGCCAAGCCTAAGCCAGCAACTGCCCGCAGC...CAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAAAACTGCACTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524486.5
CDS-3UTR CCA 90 bp CACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGGACCAGAGCCAGTACCTaGAAGCGTGCGTACAGGTGG +
Preference number: 4 (lower is better)
Translates to: HWRDLKVGALPIHWGISGTRAST*KRAYRW
Trigger: CCACCTGTACGCACGCTTCCAGGTACTGGCTCTGGT...CCCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531286.5
CDS-3UTR TCA 90 bp ACAGTGCAGTTTTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGTGCGTCCGAATCCTCTaGAGCATCTCCTGCGGCAGC +
Preference number: 4 (lower is better)
Translates to: TVQFCCSQGPVPTHWRDLCVRIL*SISCGS
Trigger: GCTGCCGCAGGAGATGCTTCAGAGGATTCGGACGCA...CAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAAAACTGCACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
CDS-3UTR TCA 90 bp TTTTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGTGTCCAGCAGATTCTaGGAGAGATCGAGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: FCCSQGPVPTHWRDLKVGVSSRF*ERSRRC
Trigger: GCAGCGCCTCGATCTCTCTCAGAATCTGCTGGACAC...CCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
CDS-3UTR TCA 90 bp CACATTCTTCAGGTGCGAGTAGAAGACAAAGCAGATTCTGCCCTCCACACAGTCGAGGGCTGCCACTGGTaGACTCGGGGCGTCTGGCGA +
Preference number: 4 (lower is better)
Translates to: HILQVRVEDKADSALHTVEGCHW*TRGVWR
Trigger: TCGCCAGACGCCCCGAGTTCACCAGTGGCAGCCCTC...GACTGTGTGGAGGGCAGAATCTGCTTTGTCTTCTACTCGCACCTGAAGAATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR TCA 90 bp ACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGAAAGCTGTCCAAATCTaGGGTCAGGAACAGTCTGGG +
Preference number: 4 (lower is better)
Translates to: TRPHTLERLEGGGSAHPLKAVQI*GQEQSG
Trigger: CCCAGACTGTTCCTGACCTCAGATTTGGACAGCTTT...CAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR TCA 90 bp TGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGAAAGCTGTCCAAATCTaGGGTCAGGAACAGTCTGGG +
Preference number: 4 (lower is better)
Translates to: CSQGPVPTHWRDLKVGALKAVQI*GQEQSG
Trigger: CCCAGACTGTTCCTGACCTCAGATTTGGACAGCTTT...CAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR TCA 90 bp CAAAGAACTCTTCGCCCTCGAACATCTCCACCGTGTCAGAGGGCTCGGGGCCCCAAAGCTGTCCAAATCTaGGGTCAGGAACAGTCTGGG +
Preference number: 4 (lower is better)
Translates to: QRTLRPRTSPPCQRARGPKAVQI*GQEQSG
Trigger: CCCAGACTGTTCCTGACCTCAGATTTGGACAGCTTT...GGGGCCCCGAGCCCTCTGACACGGTGGAGATGTTCGAGGGCGAAGAGTTCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR TCA 90 bp GTTTTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGTCACTGAGCAGCCTTaGGGGGTCACAGGAAAGCTG +
Preference number: 4 (lower is better)
Translates to: VLLLTGTRPHTLERLEGGVTEQP*GVTGKL
Trigger: CAGCTTTCCTGTGACCCCTCAAGGCTGCTCAGTGAC...CCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAAAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR TCA 90 bp CCTTCACATTCTTCAGGTGCGAGTAGAAGACAAAGCAGATTCTGCCCTCCACACGCCGATAGCGGATGGTaGTGGGGGTGGCGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: PSHSSGASRRQSRFCPPHADSGW*WGWRWL
Trigger: GAGCCACCGCCACCCCCATCACCATCCGCTATCGGC...GTGTGGAGGGCAGAATCTGCTTTGTCTTCTACTCGCACCTGAAGAATGTGAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR TCA 90 bp ACAGTGCAGTTTTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGTGTCATTCCGGGTCCTaGCCACCACTTCACGGCAGC +
Preference number: 4 (lower is better)
Translates to: TVQFCCSQGPVPTHWRDLCHSGS*PPLHGS
Trigger: GCTGCCGTGAAGTGGTGGTCAGGACCCGGAATGACA...CAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAAAACTGCACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR TCA 90 bp CTCAGCCCAGGAGAAGAGCATGTGACGGATCTGCTCATCCAGATCATCCCGGAATGTCATTCCGGGTCCTaGCCACCACTTCACGGCAGC +
Preference number: 4 (lower is better)
Translates to: LSPGEEHVTDLLIQIIPECHSGS*PPLHGS
Trigger: GCTGCCGTGAAGTGGTGGTCAGGACCCGGAATGACA...TTCCGGGATGATCTGGATGAGCAGATCCGTCACATGCTCTTCTCCTGGGCTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR TCA 90 bp TTTTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGACTTTGACCCCAGGATaGCCCGAGGAGCACAGCAGT +
Preference number: 4 (lower is better)
Translates to: FCCSQGPVPTHWRDLKVGTLTPG*PEEHSS
Trigger: ACTGCTGTGCTCCTCGGGTCATCCTGGGGTCAAAGT...CCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR TCA 90 bp CCGCGCTCGAAGGCCGCAAAGAACTCTTCGCCCTCGAACATCTCCACCGTGTCACCCCAGTCCTGGAGATaGGTCCCCCTTCTATTTACA +
Preference number: 4 (lower is better)
Translates to: PRSKAAKNSSPSNISTVSPQSWR*VPLLFT
Trigger: TGTAAATAGAAGGGGGACTCATCTCCAGGACTGGGG...TGACACGGTGGAGATGTTCGAGGGCGAAGAGTTCTTTGCGGCCTTCGAGCGCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524486.5
CDS-3UTR GCA 90 bp CTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGGCCGAGGGTCCTCGTGAGTaGTCAGACGCAAGAATTCCA +
Preference number: 4 (lower is better)
Translates to: LERLEGGGSAHPLGNIWAEGPRE*SDARIP
Trigger: TGGAATTCTTGCGTCTGAGCACTCACGAGGACCCTC...GGCCCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
CDS-3UTR GCA 90 bp AGTGCAGTTTTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAACAGCAGGGGGCTCACTaGAGCCTCTGGTTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: SAVLLLTGTRPHTLERLEQQGAH*SLWFSQ
Trigger: CTGGGAGAACCAGAGGCTGCAGTGAGCCCCCTGCTG...TTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAAAACTGCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp GAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGGCCAGCAGACAAAGCAGATTCTaGCCTCCACACAGTCAGGGC +
Preference number: 4 (lower is better)
Translates to: ERLEGGGSAHPLGNIWASRQSRF*PPHSQG
Trigger: GCCCTGACTGTGTGGAGGGCAGAATCTGCTTTGTCT...GCTGGCCCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp AGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGGCCAGCCAGACAAAGCAGATTCTaGCCTCCACACAGTCAGGGC +
Preference number: 4 (lower is better)
Translates to: RDLKVGALPIHWGISGPARQSRF*PPHSQG
Trigger: GCCCTGACTGTGTGGAGGGCAGAATCTGCTTTGTCT...GGCTGGCCCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp ACAGTGCAGTTTTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAGCCCATGCGTCGGATaGTGTCCTGGTACTTGCGGC +
Preference number: 4 (lower is better)
Translates to: TVQFCCSQGPVPTHWRDLSPCVG*CPGTCG
Trigger: GCCGCAAGTACCAGGACAGCATCCGACGCATGGGCT...CAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAAAACTGCACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp CTCAGCCCAGGAGAAGAGCATGTGACGGATCTGCTCATCCAGATCATCCCGGAAAGCCCATGCGTCGGATaGTGTCCTGGTACTTGCGGC +
Preference number: 4 (lower is better)
Translates to: LSPGEEHVTDLLIQIIPESPCVG*CPGTCG
Trigger: GCCGCAAGTACCAGGACAGCATCCGACGCATGGGCT...TTCCGGGATGATCTGGATGAGCAGATCCGTCACATGCTCTTCTCCTGGGCTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CCA 90 bp AAACAGTGCAGTTTTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTCCCACCGACGGTCCTTaGAGGCCAGACATGTCCCAG +
Preference number: 4 (lower is better)
Translates to: KQCSFVAHRDPSPHTGETPTDGP*RPDMSQ
Trigger: CTGGGACATGTCTGGCCTCCAAGGACCGTCGGTGGG...AGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAAAACTGCACTGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
CDS-3UTR CCA 90 bp CCTTCACATTCTTCAGGTGCGAGTAGAAGACAAAGCAGATTCTGCCCTCCACACGCAGCTGGGCCAGGGTaGCCTCCAGCAGCTGAGGGT +
Preference number: 4 (lower is better)
Translates to: PSHSSGASRRQSRFCPPHAAGPG*PPAAEG
Trigger: ACCCTCAGCTGCTGGAGGCCACCCTGGCCCAGCTGC...GTGTGGAGGGCAGAATCTGCTTTGTCTTCTACTCGCACCTGAAGAATGTGAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
CDS-3UTR CCA 90 bp CACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGGCAGTCTGGGCATTTCTaGAATGAGGGCTGCCACTGG +
Preference number: 4 (lower is better)
Translates to: HWRDLKVGALPIHWGISGQSGHF*NEGCHW
Trigger: CCAGTGGCAGCCCTCATTCCAGAAATGCCCAGACTG...CCCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CCA 90 bp ACTCAGCAGGTTGCTCTGCGTCAGAAAGCCGGTCTCGGCATCTCCCAGATTCAAGCACCAGGCAGGCATTaGACACAGGGCGGGAAACCA +
Preference number: 4 (lower is better)
Translates to: TQQVALRQKAGLGISQIQAPGRH*TQGGKP
Trigger: TGGTTTCCCGCCCTGTGTCCAATGCCTGCCTGGTGC...TTGAATCTGGGAGATGCCGAGACCGGCTTTCTGACGCAGAGCAACCTGCTGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CCA 90 bp GATGCCGCGCTCGAAGGCCGCAAAGAACTCTTCGCCCTCGAACATCTCCACCGTCTCCCACACAGTTCTTaGTGGTGTACCAGAGCCAGT +
Preference number: 4 (lower is better)
Translates to: DAALEGRKELFALEHLHRLPHSS*WCTRAS
Trigger: ACTGGCTCTGGTACACCACCAAGAACTGTGTGGGAG...ACGGTGGAGATGTTCGAGGGCGAAGAGTTCTTTGCGGCCTTCGAGCGCGGCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CCA 90 bp GTCTCCAGGTCACCCCAGCTGTTGTCATTCCGGGTCCTGACCACCACTTCACGGCTCCCACACAGTTCTTaGTGGTGTACCAGAGCCAGT +
Preference number: 4 (lower is better)
Translates to: VSRSPQLLSFRVLTTTSRLPHSS*WCTRAS
Trigger: ACTGGCTCTGGTACACCACCAAGAACTGTGTGGGAG...CCGTGAAGTGGTGGTCAGGACCCGGAATGACAACAGCTGGGGTGACCTGGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
CDS-3UTR CCA 90 bp CACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGGCCCGGTCCAGAGTGGTaGTCACGTATACCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: HWRDLKVGALPIHWGISGPGPEW*SRIPPS
Trigger: TGAAGGAGGTATACGTGACCACCACTCTGGACCGGG...CCCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347755.10
ENST00000524486.5
ENST00000525028.6
CDS-3UTR CCA 90 bp CACATTCTTCAGGTGCGAGTAGAAGACAAAGCAGATTCTGCCCTCCACACAGTCGTGCAGGGCCACGGCTaGCCAGTCCAGACCCAGACG +
Preference number: 4 (lower is better)
Translates to: HILQVRVEDKADSALHTVVQGHG*PVQTQT
Trigger: CGTCTGGGTCTGGACTGGCCAGCCGTGGCCCTGCAC...GACTGTGTGGAGGGCAGAATCTGCTTTGTCTTCTACTCGCACCTGAAGAATGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CCA 90 bp ACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTaGGCCAGCCTAAAAGTCTGT +
Preference number: 4 (lower is better)
Translates to: TGTRPHTLERLEGGGSAHPLGNI*ASLKVC
Trigger: ACAGACTTTTAGGCTGGCCCAGATATTCCCCAGTGG...ATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CCA 90 bp TCAGCATCCACGTCGATGCCGCGCTCGAAGGCCGCAAAGAACTCTTCGCCCTCGCCACTGGGGAATATCTaGGCCAGCCTAAAAGTCTGT +
Preference number: 4 (lower is better)
Translates to: SASTSMPRSKAAKNSSPSPLGNI*ASLKVC
Trigger: ACAGACTTTTAGGCTGGCCCAGATATTCCCCAGTGG...CGAGGGCGAAGAGTTCTTTGCGGCCTTCGAGCGCGGCATCGACGTGGATGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CCA 90 bp ACAGTGCAGTTTTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGGCTCTGCCCATCCACTaGGGAATATCTGGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: TVQFCCSQGPVPTHWRDLALPIH*GISGPA
Trigger: GGCTGGCCCAGATATTCCCCAGTGGATGGGCAGAGC...CAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAAAACTGCACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CCA 90 bp GTTGCTCTGCGTCAGAAAGCCGGTCTCGGCATCTCCCAGATTCAAGGGTGCCAATGGAAATCTGGCCAATaGAGCCGTGGAGCTGCGAGG +
Preference number: 4 (lower is better)
Translates to: VALRQKAGLGISQIQGCQWKSGQ*SRGAAR
Trigger: CCTCGCAGCTCCACGGCTCCATTGGCCAGATTTCCA...TTGGCACCCTTGAATCTGGGAGATGCCGAGACCGGCTTTCTGACGCAGAGCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524486.5
CDS-3UTR CCA 90 bp AACAGTGCAGTTTTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGCCTGGGCTGCAGAGTaGGGGAGACCTTGTGGTCAC +
Preference number: 4 (lower is better)
Translates to: NSAVLLLTGTRPHTLERLAWAAE*GRPCGH
Trigger: GTGACCACAAGGTCTCCCCCACTCTGCAGCCCAGGC...AAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAAAACTGCACTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
CDS-3UTR TCA 90 bp ACAGTGCAGTTTTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGTCAGAGAGGCAGTTGTaGGACAGCAAGAGCGCACCC +
Preference number: 4 (lower is better)
Translates to: TVQFCCSQGPVPTHWRDLSERQL*DSKSAP
Trigger: GGGTGCGCTCTTGCTGTCTCACAACTGCCTCTCTGA...CAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAAAACTGCACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
CDS-3UTR TCA 90 bp ACTCAGCAGGTTGCTCTGCGTCAGAAAGCCGGTCTCGGCATCTCCCAGATTCAAGTCACTGAGCAGCCTTaGGGGGTCACAGGAAAGCTG +
Preference number: 4 (lower is better)
Translates to: TQQVALRQKAGLGISQIQVTEQP*GVTGKL
Trigger: CAGCTTTCCTGTGACCCCTCAAGGCTGCTCAGTGAC...TTGAATCTGGGAGATGCCGAGACCGGCTTTCTGACGCAGAGCAACCTGCTGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR TCA 90 bp AAACAGTGCAGTTTTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGTCATTCCGGGTCCTaGCCACCACTTCACGGCAGC +
Preference number: 4 (lower is better)
Translates to: KQCSFVAHRDPSPHTGETCHSGS*PPLHGS
Trigger: GCTGCCGTGAAGTGGTGGTCAGGACCCGGAATGACA...AGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAAAACTGCACTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR TCA 90 bp GTTTTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGACCAGGAGAAGTGTGTaGCCTGGAAGCGTGCGTACA +
Preference number: 4 (lower is better)
Translates to: VLLLTGTRPHTLERLEGGTRRSV*PGSVRT
Trigger: TGTACGCACGCTTCCAGGTCACACACTTCTCCTGGT...CCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
CDS-3UTR GCA 90 bp AGTGCAGTTTTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAATCCACCTGCAGCAGCTaGAGAGGCTGCTGGACACAC +
Preference number: 4 (lower is better)
Translates to: SAVLLLTGTRPHTLERLESTCSS*RGCWTH
Trigger: GTGTGTCCAGCAGCCTCTGCAGCTGCTGCAGGTGGA...TTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAAAACTGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
CDS-3UTR GCA 90 bp AGTGCAGTTTTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGTCATCCCAGGTGGCTaGAGGAGGGGCCCAGTACAA +
Preference number: 4 (lower is better)
Translates to: SAVLLLTGTRPHTLERLEVIPGG*RRGPVQ
Trigger: TTGTACTGGGCCCCTCCTGCAGCCACCTGGGATGAC...TTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAAAACTGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp AGTGCAGTTTTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAATCCCAGATTCAAGGGTaGCAAGGAGAGGCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: SAVLLLTGTRPHTLERLESQIQG*QGEASP
Trigger: GGGGCTGGCCTCTCCTTGGCACCCTTGAATCTGGGA...TTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAAAACTGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CCA 90 bp AAACAGTGCAGTTTTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGCGCACCACCTGCATaGAGACTCGACGAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: KQCSFVAHRDPSPHTGETCAPPA*RLDEAP
Trigger: AGGAGCCTCGTCGAGTCTCCATGCAGGTGGTGCGCA...AGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAAAACTGCACTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CCA 90 bp AACAGTGCAGTTTTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTTGCGCACCACCTGCATaGAGACTCGACGAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: NSAVLLLTGTRPHTLERLCAPPA*RLDEAP
Trigger: AGGAGCCTCGTCGAGTCTCCATGCAGGTGGTGCGCA...AAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAAAACTGCACTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CCA 90 bp GCAGGTTGCTCTGCGTCAGAAAGCCGGTCTCGGCATCTCCCAGATTCAAGGGTGCTCCCACACAGTTCTTaGTGGTGTACCAGAGCCAGT +
Preference number: 4 (lower is better)
Translates to: AGCSASESRSRHLPDSRVLPHSS*WCTRAS
Trigger: ACTGGCTCTGGTACACCACCAAGAACTGTGTGGGAG...CACCCTTGAATCTGGGAGATGCCGAGACCGGCTTTCTGACGCAGAGCAACCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CCA 90 bp AGTGCAGTTTTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAACAGCCTAAAAGTCTGTaGGGCCTAGGCCTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: SAVLLLTGTRPHTLERLEQPKSL*GLGLGR
Trigger: CCTGCCCAGGCCTAGGCCCCACAGACTTTTAGGCTG...TTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAAAACTGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CCA 90 bp AGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGGCCAGCCCCACTGGGGAATATCTaGGCCAGCCTAAAAGTCTGT +
Preference number: 4 (lower is better)
Translates to: RDLKVGALPIHWGISGPAPLGNI*ASLKVC
Trigger: ACAGACTTTTAGGCTGGCCCAGATATTCCCCAGTGG...GGCTGGCCCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CCA 90 bp GATGCCGCGCTCGAAGGCCGCAAAGAACTCTTCGCCCTCGAACATCTCCACCGTCCACTGGGGAATATCTaGGCCAGCCTAAAAGTCTGT +
Preference number: 4 (lower is better)
Translates to: DAALEGRKELFALEHLHRPLGNI*ASLKVC
Trigger: ACAGACTTTTAGGCTGGCCCAGATATTCCCCAGTGG...ACGGTGGAGATGTTCGAGGGCGAAGAGTTCTTTGCGGCCTTCGAGCGCGGCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CCA 90 bp AACAGTGCAGTTTTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTCCCGTCCCCACACACTaGAGAGACTTGAAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: NSAVLLLTGTRPHTLERLPVPTH*RDLKVG
Trigger: CCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGG...AAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAAAACTGCACTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR TCA 90 bp ACAGTGCAGTTTTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGTGGGCATTTCTGGAATaGGGGCTGCCACTGGTGAAC +
Preference number: 4 (lower is better)
Translates to: TVQFCCSQGPVPTHWRDLWAFLE*GLPLVN
Trigger: GTTCACCAGTGGCAGCCCTCATTCCAGAAATGCCCA...CAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAAAACTGCACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR TCA 90 bp AGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGGCCAGCCTAAAAGCTGTCCAAATCTaGGGTCAGGAACAGTCTGGG +
Preference number: 4 (lower is better)
Translates to: RLEGGGSAHPLGNIWASLKAVQI*GQEQSG
Trigger: CCCAGACTGTTCCTGACCTCAGATTTGGACAGCTTT...TAGGCTGGCCCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp ACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGGAGGGTCCTCGTGAGTaGTCAGACGCAAGAATTCCA +
Preference number: 4 (lower is better)
Translates to: TLERLEGGGSAHPLGNIWEGPRE*SDARIP
Trigger: TGGAATTCTTGCGTCTGAGCACTCACGAGGACCCTC...CCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
CDS-3UTR GCA 90 bp AAACAGTGCAGTTTTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTCTCAGCAGGTTGCTCTaGGTCAGAAAGCCGGTCTCG +
Preference number: 4 (lower is better)
Translates to: KQCSFVAHRDPSPHTGETLSRLL*VRKPVS
Trigger: CGAGACCGGCTTTCTGACGCAGAGCAACCTGCTGAG...AGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAAAACTGCACTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CCA 90 bp CTCAGCCCAGGAGAAGAGCATGTGACGGATCTGCTCATCCAGATCATCCCGGAACAGTCTGGGCATTTCTaGAATGAGGGCTGCCACTGG +
Preference number: 4 (lower is better)
Translates to: LSPGEEHVTDLLIQIIPEQSGHF*NEGCHW
Trigger: CCAGTGGCAGCCCTCATTCCAGAAATGCCCAGACTG...TTCCGGGATGATCTGGATGAGCAGATCCGTCACATGCTCTTCTCCTGGGCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CCA 90 bp TTTTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGCTCCCACACAGTTCTTaGTGGTGTACCAGAGCCAGT +
Preference number: 4 (lower is better)
Translates to: FCCSQGPVPTHWRDLKVGLPHSS*WCTRAS
Trigger: ACTGGCTCTGGTACACCACCAAGAACTGTGTGGGAG...CCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR GCA 90 bp ACTCAGCAGGTTGCTCTGCGTCAGAAAGCCGGTCTCGGCATCTCCCAGATTCAAGAGGGTCCTCGTGAGTaGTCAGACGCAAGAATTCCA +
Preference number: 4 (lower is better)
Translates to: TQQVALRQKAGLGISQIQEGPRE*SDARIP
Trigger: TGGAATTCTTGCGTCTGAGCACTCACGAGGACCCTC...TTGAATCTGGGAGATGCCGAGACCGGCTTTCTGACGCAGAGCAACCTGCTGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
CDS-3UTR GCA 90 bp GTGCAGTTTTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGAGACAAAGCAGATTCTaGCCTCCACACAGTCAGGGC +
Preference number: 4 (lower is better)
Translates to: VQFCCSQGPVPTHWRDLKRQSRF*PPHSQG
Trigger: GCCCTGACTGTGTGGAGGGCAGAATCTGCTTTGTCT...CTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAAAACTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CCA 90 bp AACAGTGCAGTTTTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTCAGTCTGGGCATTTCTaGAATGAGGGCTGCCACTGG +
Preference number: 4 (lower is better)
Translates to: NSAVLLLTGTRPHTLERLQSGHF*NEGCHW
Trigger: CCAGTGGCAGCCCTCATTCCAGAAATGCCCAGACTG...AAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAAAACTGCACTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CCA 90 bp GTTTTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGCCACTGGGGAATATCTaGGCCAGCCTAAAAGTCTGT +
Preference number: 4 (lower is better)
Translates to: VLLLTGTRPHTLERLEGGPLGNI*ASLKVC
Trigger: ACAGACTTTTAGGCTGGCCCAGATATTCCCCAGTGG...CCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR TCA 90 bp CTTGAGGGGTCACAGGAAAGCTGTCCAAATCTGAGGTCAGGAACAGTCTGGGCACAGGAGAAGAGCATGTaGCGGATCTGCTCATCCAGA +
Preference number: 4 (lower is better)
Translates to: LEGSQESCPNLRSGTVWAQEKSM*RICSSR
Trigger: TCTGGATGAGCAGATCCGTCACATGCTCTTCTCCTG...TGCCCAGACTGTTCCTGACCTCAGATTTGGACAGCTTTCCTGTGACCCCTCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
CDS GCA 90 bp GGCCCGCGGCGCAGGCCACTTCCGGCAGCGGTGCACCATGGGACTTaGAGTTCGCTGGCAAAGGTTGAGTCCCGGGCGTGGCGGCCGCGC +
Preference number: 5 (lower is better)
Translates to: GPRRRPLPAAVHHGT*SSLAKVESRAWRPR
Trigger: GCGCGGCCGCCACGCCCGGGACTCAACCTTTGCCAGCGAACTGCAAGTCCCATGGTGCACCGCTGCCGGAAGTGGCCTGCGCCGCGGGCC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530911.1
CDS GCA 90 bp AGGGAACCACCAAGGAGTCAAGGCGAGCCTACCGCCAGCAGCTTCTaGCCGGGCCCACGCGCCGTTCCGGGTAGGCCCGCGGCGCAGGCC +
Preference number: 5 (lower is better)
Translates to: REPPRSQGEPTASSF*PGPRAVPGRPAAQA
Trigger: GGCCTGCGCCGCGGGCCTACCCGGAACGGCGCGTGGGCCCGGGCAGAAGCTGCTGGCGGTAGGCTCGCCTTGACTCCTTGGTGGTTCCCT
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530911.1
CDS-3UTR CAA 90 bp TGGGGGTGGCGGTGGCTCCCGCTGGGAACTGCAGGCGGACGCCACAGGCCAGGGCTGGGGCGTGAGCCATaGGGCAGCTTCGGGGTCCTG +
Preference number: 5 (lower is better)
Translates to: WGWRWLPLGTAGGRHRPGLGREP*GSFGVL
Trigger: CAGGACCCCGAAGCTGCCCAATGGCTCACGCCCCAG...CCCTGGCCTGTGGCGTCCGCCTGCAGTTCCCAGCGGGAGCCACCGCCACCCCCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000524486.5
CDS GCA 90 bp TGGCAGCCAGCGGGCAGTGGGAGCCTCACCGGAACTCGTGCCGGATaGGCTGCACCTCCCGGTAGGACACCCCCAGGTGCAGGGCCACGG +
Preference number: 5 (lower is better)
Translates to: WQPAGSGSLTGTRAG*AAPPGRTPPGAGPR
Trigger: CCGTGGCCCTGCACCTGGGGGTGTCCTACCGGGAGGTGCAGCGCATCCGGCACGAGTTCCGGTGAGGCTCCCACTGCCCGCTGGCTGCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527357.5
CDS GCA 90 bp TCCCACCGGCAGCTTGATGGGCAGAGTGGCCATCCACAGGGCGTCTaGGCCCTTCCTCTGCCGGGCAGCCTCAGCCTCCTCGGGCACCCG +
Preference number: 5 (lower is better)
Translates to: SHRQLDGQSGHPQGV*ALPLPGSLSLLGHP
Trigger: CGGGTGCCCGAGGAGGCTGAGGCTGCCCGGCAGAGGAAGGGCGCAGACGCCCTGTGGATGGCCACTCTGCCCATCAAGCTGCCGGTGGGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527357.5
ENST00000534525.5
ENST00000534649.2
CDS-3UTR CAA 90 bp TGGGGGTGGCGGTGGCTCCCGCTGGGAACTGCAGGCGGACGCCACAGGCCAGGGATGCTGTCCTGGTACTaGCGGCGGCCGAGCTCCAAG +
Preference number: 5 (lower is better)
Translates to: WGWRWLPLGTAGGRHRPGMLSWY*RRPSSK
Trigger: CTTGGAGCTCGGCCGCCGCAAGTACCAGGACAGCAT...CCCTGGCCTGTGGCGTCCGCCTGCAGTTCCCAGCGGGAGCCACCGCCACCCCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
CDS GCA 90 bp GCAGCTGCTGGCAGCCCCCGGGGTACAGGTCCAAGCTCAGCCGGTTaGCGCCCAGGAAAGGCAGCGCCCTGGACCCTGCGTCCGAATCCT +
Preference number: 5 (lower is better)
Translates to: AAAGSPRGTGPSSAG*RPGKAAPWTLRPNP
Trigger: AGGATTCGGACGCAGGGTCCAGGGCGCTGCCTTTCCTGGGCGGCAACCGGCTGAGCTTGGACCTGTACCCCGGGGGCTGCCAGCAGCTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000527357.5
ENST00000534525.5
ENST00000534649.2
CDS-3UTR CAA 90 bp GCGGCGGCCGAGCTCCAAGACTGCGCGCACCTCTTCAGCCACGTCCTGCCGGTCGCCCACCGACGGTCCTaGGAGGCCAGACATGTCCCA +
Preference number: 5 (lower is better)
Translates to: AAAELQDCAHLFSHVLPVAHRRS*EARHVP
Trigger: TGGGACATGTCTGGCCTCCAAGGACCGTCGGTGGGC...GACCGGCAGGACGTGGCTGAAGAGGTGCGCGCAGTCTTGGAGCTCGGCCGCCGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
CDS CCA 90 bp GCTCTGGCCCCTCCACCGTTGCAGCCATCGCCCACCGACGGTCCTTaGAGGCCAGACATGTCCCAGCACGCAGGCAGGCCTGTCCAGGCA +
Preference number: 5 (lower is better)
Translates to: ALAPPPLQPSPTDGP*RPDMSQHAGRPVQA
Trigger: TGCCTGGACAGGCCTGCCTGCGTGCTGGGACATGTCTGGCCTCCAAGGACCGTCGGTGGGCGATGGCTGCAACGGTGGAGGGGCCAGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000527357.5
ENST00000534525.5
ENST00000534649.2
CDS CCA 90 bp ACGGCTCAGGGCAGCAGCTCTCCACTCGCCACCGGCAGGCCTGGGTaGCCCTCACCTGGGGTGCCTCTTCCTCCAGGTAGGTCTCCAGGT +
Preference number: 5 (lower is better)
Translates to: TAQGSSSPLATGRPG*PSPGVPLPPGRSPG
Trigger: ACCTGGAGACCTACCTGGAGGAAGAGGCACCCCAGGTGAGGGCCACCCAGGCCTGCCGGTGGCGAGTGGAGAGCTGCTGCCCTGAGCCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527357.5
CDS-3UTR CAA 90 bp GTCATTCCGGGTCCTGACCACCACTTCACGGCAGCGCCGGGCCTGCGGTGGGGTTCCAAGCTCAGCCGGTaGCCGCCCAGGAAAGGCAGC +
Preference number: 5 (lower is better)
Translates to: VIPGPDHHFTAAPGLRWGSKLSR*PPRKGS
Trigger: GCTGCCTTTCCTGGGCGGCAACCGGCTGAGCTTGGA...ACCCCACCGCAGGCCCGGCGCTGCCGTGAAGTGGTGGTCAGGACCCGGAATGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
CDS-3UTR CAA 90 bp GGCGGCCGAGCTCCAAGACTGCGCGCACCTCTTCAGCCACGTCCTGCCGGTCACAGGGTGGCGTCCACCTaGTTTCGGGGCAGGCACTGC +
Preference number: 5 (lower is better)
Translates to: GGRAPRLRAPLQPRPAGHRVAST*FRGRHC
Trigger: GCAGTGCCTGCCCCGAAACAAGGTGGACGCCACCCT...GTGACCGGCAGGACGTGGCTGAAGAGGTGCGCGCAGTCTTGGAGCTCGGCCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS GCA 90 bp ATCTCCTGCGGCAGCAGCTGCCTCCAGCTCTGGCCCCTCCACCGTTaGAGCCATCGCCCACCGACGGTCCTTGGAGGCCAGACATGTCCC +
Preference number: 5 (lower is better)
Translates to: ISCGSSCLQLWPLHR*SHRPPTVLGGQTCP
Trigger: GGGACATGTCTGGCCTCCAAGGACCGTCGGTGGGCGATGGCTGCAACGGTGGAGGGGCCAGAGCTGGAGGCAGCTGCTGCCGCAGGAGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000527357.5
ENST00000534525.5
ENST00000534649.2
CDS CCA 90 bp CCTCAGGTCGAGCCGGGTGAGGAGTGGAAGGCGGGCCAAGTCAGCTaGCACAGAGGCCAGGAGGTTGCCAGAGAGGCTGGGAGGCTCTGC +
Preference number: 5 (lower is better)
Translates to: PQVEPGEEWKAGQVS*HRGQEVAREAGRLC
Trigger: GCAGAGCCTCCCAGCCTCTCTGGCAACCTCCTGGCCTCTGTGCCAGCTGACTTGGCCCGCCTTCCACTCCTCACCCGGCTCGACCTGAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534649.2
CDS CCA 90 bp CAGGTCCCGGAGCTGGTTGTCCCTCAGGTCGAGCCGGGTGAGGAGTaGAAGGCGGGCCAAGTCAGCTGGCACAGAGGCCAGGAGGTTGCC +
Preference number: 5 (lower is better)
Translates to: QVPELVVPQVEPGEE*KAGQVSWHRGQEVA
Trigger: GGCAACCTCCTGGCCTCTGTGCCAGCTGACTTGGCCCGCCTTCCACTCCTCACCCGGCTCGACCTGAGGGACAACCAGCTCCGGGACCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534649.2
CDS-3UTR CAA 90 bp CCGGATGCGCTGCACCTCCCGGTAGGACACCCCCAGGTGCAGGGCCACGGCTGGAGCGTCTGCAGGCGGTaGTGTGTCACTGTGAGGAAG +
Preference number: 5 (lower is better)
Translates to: PDALHLPVGHPQVQGHGWSVCRR*CVTVRK
Trigger: CTTCCTCACAGTGACACACAACCGCCTGCAGACGCT...CCAGCCGTGGCCCTGCACCTGGGGGTGTCCTACCGGGAGGTGCAGCGCATCCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
CDS CCA 90 bp CCCCCACCACACTCTGCCTCGGAGTGTGGGGGAGTTCCCGGCTCCTaGGGCCAGGTGCGGCCAGACCTTTCCTTTCCAGCCTGGTGTTTG +
Preference number: 5 (lower is better)
Translates to: PPPHSASECGGVPGS*GQVRPDLSFPAWCL
Trigger: CAAACACCAGGCTGGAAAGGAAAGGTCTGGCCGCACCTGGCCCCAGGAGCCGGGAACTCCCCCACACTCCGAGGCAGAGTGTGGTGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000527357.5
CDS CCA 90 bp CACCATGGGACTTGCAGTTCGCTGGCAAAGGTTGAGTCCCGGGCGTaGCGGCCGCGCTCCATGTTGGGAGCTGTAGGCGCCGCGTGGCAT +
Preference number: 5 (lower is better)
Translates to: HHGTCSSLAKVESRA*RPRSMLGAVGAAWH
Trigger: ATGCCACGCGGCGCCTACAGCTCCCAACATGGAGCGCGGCCGCCACGCCCGGGACTCAACCTTTGCCAGCGAACTGCAAGTCCCATGGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530911.1
CDS-3UTR CAA 90 bp CGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGCGGCGTTGCCCTCCTTaGAGGACCAGGGAGCGGAGG +
Preference number: 5 (lower is better)
Translates to: RPHTLERLEGGGSAHPLGRRCPP*RTRERR
Trigger: CCTCCGCTCCCTGGTCCTCAAAGGAGGGCAACGCCG...CCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000347755.10
ENST00000411829.6
CDS-3UTR CAA 90 bp CGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAGGTCCCGGAGCTGGTaGTCCCTCAGGTCGAGCCGG +
Preference number: 5 (lower is better)
Translates to: RPHTLERLEGGGSAHPLGRSRSW*SLRSSR
Trigger: CCGGCTCGACCTGAGGGACAACCAGCTCCGGGACCT...CCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
CDS-3UTR CAA 90 bp CCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGAGGTCCCGGAGCTGGTaGTCCCTCAGGTCGAGCCGG +
Preference number: 5 (lower is better)
Translates to: PVPTHWRDLKVGALPIHWRSRSW*SLRSSR
Trigger: CCGGCTCGACCTGAGGGACAACCAGCTCCGGGACCT...CCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
CDS-3UTR CAA 90 bp GTCCCCTCCGGTGGCACCAGGCAGGCATTGGACACAGGGCGGGAAACCACAAGGGTTGCTGGCTTAGGCTaGGCACCAGCCCAGCCCACG +
Preference number: 5 (lower is better)
Translates to: VPSGGTRQALDTGRETTRVAGLG*APAQPT
Trigger: CGTGGGCTGGGCTGGTGCCAAGCCTAAGCCAGCAAC...CCTTGTGGTTTCCCGCCCTGTGTCCAATGCCTGCCTGGTGCCACCGGAGGGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524486.5
CDS GCA 90 bp CGGATGTGGCCCTCAGAGCCAGGGTCCGAGGTCCCAGATCGACCCTaGCAGCCAGAGAAACAGCTGCTCGAGAGGCACAGACCTCCCACC +
Preference number: 5 (lower is better)
Translates to: RMWPSEPGSEVPDRP*QPEKQLLERHRPPT
Trigger: GGTGGGAGGTCTGTGCCTCTCGAGCAGCTGTTTCTCTGGCTGGCAGGGTCGATCTGGGACCTCGGACCCTGGCTCTGAGGGCCACATCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527357.5
ENST00000534525.5
CDS CCA 90 bp ACAGGTCCAAGCTCAGCCGGTTGCCGCCCAGGAAAGGCAGCGCCCTaGACCCTGCGTCCGAATCCTCTGAAGCATCTCCTGCGGCAGCAG +
Preference number: 5 (lower is better)
Translates to: TGPSSAGCRPGKAAP*TLRPNPLKHLLRQQ
Trigger: CTGCTGCCGCAGGAGATGCTTCAGAGGATTCGGACGCAGGGTCCAGGGCGCTGCCTTTCCTGGGCGGCAACCGGCTGAGCTTGGACCTGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000527357.5
ENST00000534525.5
ENST00000534649.2
CDS-3UTR CAA 90 bp CACACAGTCAGGGCGGTCAGCATCCACGTCGATGCCGCGCTCGAAGGCCGCAAAGCCCACCGACGGTCCTaGGAGGCCAGACATGTCCCA +
Preference number: 5 (lower is better)
Translates to: HTVRAVSIHVDAALEGRKAHRRS*EARHVP
Trigger: TGGGACATGTCTGGCCTCCAAGGACCGTCGGTGGGC...TTTGCGGCCTTCGAGCGCGGCATCGACGTGGATGCTGACCGCCCTGACTGTGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
CDS-3UTR CAA 90 bp CGGGCAGGTTGGTCAGGGCACCCCGGAGACAGGCACCCAGTGTGTCCCGGCGTTAGTGTCTCCAGGCTGTaGAAGCTCAGGTCCAGGTGG +
Preference number: 5 (lower is better)
Translates to: RAGWSGHPGDRHPVCPGVSVSRL*KLRSRW
Trigger: CCACCTGGACCTGAGCTTCAACAGCCTGGAGACACT...AACGCCGGGACACACTGGGTGCCTGTCTCCGGGGTGCCCTGACCAACCTGCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
CDS-3UTR CAA 90 bp CCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGAGGCTCTGCAGCCGGTaGGAGGCCAGGTTGAGCTCC +
Preference number: 5 (lower is better)
Translates to: PVPTHWRDLKVGALPIHWRLCSR*EARLSS
Trigger: GGAGCTCAACCTGGCCTCCAACCGGCTGCAGAGCCT...CCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
CDS-3UTR CAA 90 bp TCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCAGGCTCTGCAGCCGGTaGGAGGCCAGGTTGAGCTCC +
Preference number: 5 (lower is better)
Translates to: SQGPVPTHWRDLKVGALPRLCSR*EARLSS
Trigger: GGAGCTCAACCTGGCCTCCAACCGGCTGCAGAGCCT...GGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
CDS-3UTR CAA 90 bp CGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAGGGTGGCGTCCACCTaGTTTCGGGGCAGGCACTGC +
Preference number: 5 (lower is better)
Translates to: RPHTLERLEGGGSAHPLGRVAST*FRGRHC
Trigger: GCAGTGCCTGCCCCGAAACAAGGTGGACGCCACCCT...CCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CAA 90 bp CTCGAACATCTCCACCGTGTCAGAGGGCTCGGGGCCCCGGTACCGCTCCAGCAGGCCACACTCAGCAGGTaGCTCTGCGTCAGAAAGCCG +
Preference number: 5 (lower is better)
Translates to: LEHLHRVRGLGAPVPLQQATLSR*LCVRKP
Trigger: CGGCTTTCTGACGCAGAGCAACCTGCTGAGTGTGGC...CTGCTGGAGCGGTACCGGGGCCCCGAGCCCTCTGACACGGTGGAGATGTTCGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CAA 90 bp AGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGGCCAGCCGGCAGAGCGGGGTCCTaGGGGGCCAAGCCCATGCGT +
Preference number: 5 (lower is better)
Translates to: RDLKVGALPIHWGISGPAGRAGS*GAKPMR
Trigger: ACGCATGGGCTTGGCCCCCAAGGACCCCGCTCTGCC...GGCTGGCCCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CAA 90 bp GATGCCGCGCTCGAAGGCCGCAAAGAACTCTTCGCCCTCGAACATCTCCACCGTGGCAGAGCGGGGTCCTaGGGGGCCAAGCCCATGCGT +
Preference number: 5 (lower is better)
Translates to: DAALEGRKELFALEHLHRGRAGS*GAKPMR
Trigger: ACGCATGGGCTTGGCCCCCAAGGACCCCGCTCTGCC...ACGGTGGAGATGTTCGAGGGCGAAGAGTTCTTTGCGGCCTTCGAGCGCGGCATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS CCA 90 bp CGGGGTGGGCCCTTCTCTTTGGGGAAACAGGGACTCTGGATGGAGTaGGGAGCTCTAGAGCCAGGCCATCTGGGCCTGGGCTGCAGAGTG +
Preference number: 5 (lower is better)
Translates to: RGGPFSLGKQGLWME*GALEPGHLGLGCRV
Trigger: CACTCTGCAGCCCAGGCCCAGATGGCCTGGCTCTAGAGCTCCCCACTCCATCCAGAGTCCCTGTTTCCCCAAAGAGAAGGGCCCACCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
CDS CCA 90 bp GCAGCCGCTCCCAGGCCTTCCGAGCCAGGCCTCCCACACAGTTCTTaGTGGTGTACCAGAGCCAGTACCTGGAAGCGTGCGTACAGGTGG +
Preference number: 5 (lower is better)
Translates to: AAAPRPSEPGLPHSS*WCTRASTWKRAYRW
Trigger: CCACCTGTACGCACGCTTCCAGGTACTGGCTCTGGTACACCACCAAGAACTGTGTGGGAGGCCTGGCTCGGAAGGCCTGGGAGCGGCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531286.5
CDS-3UTR CAA 90 bp GGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACAGTGTGTCCCGGCGTaGCCCTCCTTTGAGGACCAG +
Preference number: 5 (lower is better)
Translates to: GTRPHTLERLEGGGSAHPQCVPA*PSFEDQ
Trigger: CTGGTCCTCAAAGGAGGGCAACGCCGGGACACACTG...TGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000347755.10
ENST00000411829.6
CDS-3UTR CAA 90 bp ACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGAGGGTGGCGTCCACCTaGTTTCGGGGCAGGCACTGC +
Preference number: 5 (lower is better)
Translates to: TRPHTLERLEGGGSAHPLRVAST*FRGRHC
Trigger: GCAGTGCCTGCCCCGAAACAAGGTGGACGCCACCCT...CAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CAA 90 bp CGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGATGCTGTCCTGGTACTaGCGGCGGCCGAGCTCCAAG +
Preference number: 5 (lower is better)
Translates to: RPHTLERLEGGGSAHPLGMLSWY*RRPSSK
Trigger: CTTGGAGCTCGGCCGCCGCAAGTACCAGGACAGCAT...CCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CAA 90 bp CCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGATGCTGTCCTGGTACTaGCGGCGGCCGAGCTCCAAG +
Preference number: 5 (lower is better)
Translates to: PVPTHWRDLKVGALPIHWMLSWY*RRPSSK
Trigger: CTTGGAGCTCGGCCGCCGCAAGTACCAGGACAGCAT...CCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CAA 90 bp AGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGGCCAGCCTAGGCAGAGCGGGGTCCTaGGGGGCCAAGCCCATGCGT +
Preference number: 5 (lower is better)
Translates to: RLEGGGSAHPLGNIWASLGRAGS*GAKPMR
Trigger: ACGCATGGGCTTGGCCCCCAAGGACCCCGCTCTGCC...TAGGCTGGCCCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS TCA 90 bp GAGCGAGAGATGGAGACAGGGCCCAGAACAGGTGGAACTCACCTTTaGGGACCAGGGAGCGGAGGCAGGACAGGCTCTGAGGCAGCTGGG +
Preference number: 5 (lower is better)
Translates to: EREMETGPRTGGTHL*GPGSGGRTGSEAAG
Trigger: CCCAGCTGCCTCAGAGCCTGTCCTGCCTCCGCTCCCTGGTCCTCAAAGGTGAGTTCCACCTGTTCTGGGCCCTGTCTCCATCTCTCGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527357.5
ENST00000534525.5
CDS CCA 90 bp CCATCACCCACAACCTTCCCCAGGAACAACATCTGCACTGTGGTCTaGAGAGACCCCCACTGGGCAGCGTCAGGGTCCAGGAGCCAGGGC +
Preference number: 5 (lower is better)
Translates to: PSPTTFPRNNICTVV*RDPHWAASGSRSQG
Trigger: GCCCTGGCTCCTGGACCCTGACGCTGCCCAGTGGGGGTCTCTCCAGACCACAGTGCAGATGTTGTTCCTGGGGAAGGTTGTGGGTGATGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000527357.5
ENST00000534525.5
CDS-3UTR CAA 90 bp TCCACGTCGATGCCGCGCTCGAAGGCCGCAAAGAACTCTTCGCCCTCGAACATCAGGCTCTGCAGCCGGTaGGAGGCCAGGTTGAGCTCC +
Preference number: 5 (lower is better)
Translates to: STSMPRSKAAKNSSPSNIRLCSR*EARLSS
Trigger: GGAGCTCAACCTGGCCTCCAACCGGCTGCAGAGCCT...GATGTTCGAGGGCGAAGAGTTCTTTGCGGCCTTCGAGCGCGGCATCGACGTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
CDS-3UTR CAA 90 bp GGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCAAGGTCACCCCAGCTGTaGTCATTCCGGGTCCTGACC +
Preference number: 5 (lower is better)
Translates to: GTRPHTLERLEGGGSAHPRSPQL*SFRVLT
Trigger: GGTCAGGACCCGGAATGACAACAGCTGGGGTGACCT...TGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CAA 90 bp TGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTAGGGTGGCGTCCACCTaGTTTCGGGGCAGGCACTGC +
Preference number: 5 (lower is better)
Translates to: CCSQGPVPTHWRDLKVGARVAST*FRGRHC
Trigger: GCAGTGCCTGCCCCGAAACAAGGTGGACGCCACCCT...AGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CAA 90 bp GGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACGCCACACTCAGCAGGTaGCTCTGCGTCAGAAAGCCG +
Preference number: 5 (lower is better)
Translates to: GPVPTHWRDLKVGALPIHATLSR*LCVRKP
Trigger: CGGCTTTCTGACGCAGAGCAACCTGCTGAGTGTGGC...GTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CAA 90 bp GTCAGGGCGGTCAGCATCCACGTCGATGCCGCGCTCGAAGGCCGCAAAGAACTCGCCACACTCAGCAGGTaGCTCTGCGTCAGAAAGCCG +
Preference number: 5 (lower is better)
Translates to: VRAVSIHVDAALEGRKELATLSR*LCVRKP
Trigger: CGGCTTTCTGACGCAGAGCAACCTGCTGAGTGTGGC...GAGTTCTTTGCGGCCTTCGAGCGCGGCATCGACGTGGATGCTGACCGCCCTGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CAA 90 bp GACGCCCAGCCACACTCAGCAGGTTGCTCTGCGTCAGAAAGCCGGTCTCGGCATATGCTGTCCTGGTACTaGCGGCGGCCGAGCTCCAAG +
Preference number: 5 (lower is better)
Translates to: DAQPHSAGCSASESRSRHMLSWY*RRPSSK
Trigger: CTTGGAGCTCGGCCGCCGCAAGTACCAGGACAGCAT...ATGCCGAGACCGGCTTTCTGACGCAGAGCAACCTGCTGAGTGTGGCTGGGCGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CAA 90 bp GGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCAACACACTGGAGAGACTaGAAGGTGGGGGCTCTGCCC +
Preference number: 5 (lower is better)
Translates to: GTRPHTLERLEGGGSAHPTHWRD*KVGALP
Trigger: GGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGT...TGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CAA 90 bp TCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCGGTGGGCCCTTCTCTTaGGGGAAACAGGGACTCTGG +
Preference number: 5 (lower is better)
Translates to: SQGPVPTHWRDLKVGALPGGPFS*GKQGLW
Trigger: CCAGAGTCCCTGTTTCCCCAAAGAGAAGGGCCCACC...GGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
CDS-3UTR CAA 90 bp ACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGTCCCAGATCGACCCTTaGAGGACCAGGGAGCGGAGG +
Preference number: 5 (lower is better)
Translates to: TRPHTLERLEGGGSAHPLSQIDP*RTRERR
Trigger: CCTCCGCTCCCTGGTCCTCAAAGGGTCGATCTGGGA...CAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
CDS-3UTR CAA 90 bp TGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGGCCAGCCCACCGACGGTCCTaGGAGGCCAGACATGTCCCA +
Preference number: 5 (lower is better)
Translates to: WRDLKVGALPIHWGISGPAHRRS*EARHVP
Trigger: TGGGACATGTCTGGCCTCCAAGGACCGTCGGTGGGC...TGGCCCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
CDS-3UTR CAA 90 bp ACAGTGCAGTTTTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGCTGGCCCCTCCACCGTaGCAGCCATCGCCCACCGAC +
Preference number: 5 (lower is better)
Translates to: TVQFCCSQGPVPTHWRDLLAPPP*QPSPTD
Trigger: GTCGGTGGGCGATGGCTGCAACGGTGGAGGGGCCAG...CAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAAAACTGCACTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
CDS-3UTR CAA 90 bp TGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCAGTGTGTCCCGGCGTaGCCCTCCTTTGAGGACCAG +
Preference number: 5 (lower is better)
Translates to: CCSQGPVPTHWRDLKVGAQCVPA*PSFEDQ
Trigger: CTGGTCCTCAAAGGAGGGCAACGCCGGGACACACTG...AGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000347755.10
ENST00000411829.6
CDS-3UTR CAA 90 bp GTCAGGGCGGTCAGCATCCACGTCGATGCCGCGCTCGAAGGCCGCAAAGAACTCAGTGTCTCCAGGCTGTaGAAGCTCAGGTCCAGGTGG +
Preference number: 5 (lower is better)
Translates to: VRAVSIHVDAALEGRKELSVSRL*KLRSRW
Trigger: CCACCTGGACCTGAGCTTCAACAGCCTGGAGACACT...GAGTTCTTTGCGGCCTTCGAGCGCGGCATCGACGTGGATGCTGACCGCCCTGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
CDS-3UTR CAA 90 bp TTTTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGAGGTCCCGGAGCTGGTaGTCCCTCAGGTCGAGCCGG +
Preference number: 5 (lower is better)
Translates to: FCCSQGPVPTHWRDLKVGRSRSW*SLRSSR
Trigger: CCGGCTCGACCTGAGGGACAACCAGCTCCGGGACCT...CCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
CDS-3UTR CAA 90 bp ACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATAGGTCACCCCAGCTGTaGTCATTCCGGGTCCTGACC +
Preference number: 5 (lower is better)
Translates to: TGTRPHTLERLEGGGSAHRSPQL*SFRVLT
Trigger: GGTCAGGACCCGGAATGACAACAGCTGGGGTGACCT...ATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CAA 90 bp AGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGGCCAGCCATGCTGTCCTGGTACTaGCGGCGGCCGAGCTCCAAG +
Preference number: 5 (lower is better)
Translates to: RDLKVGALPIHWGISGPAMLSWY*RRPSSK
Trigger: CTTGGAGCTCGGCCGCCGCAAGTACCAGGACAGCAT...GGCTGGCCCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CAA 90 bp GTGCAGTTTTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGGCAGAGCGGGGTCCTaGGGGGCCAAGCCCATGCGT +
Preference number: 5 (lower is better)
Translates to: VQFCCSQGPVPTHWRDLKGRAGS*GAKPMR
Trigger: ACGCATGGGCTTGGCCCCCAAGGACCCCGCTCTGCC...CTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAAAACTGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CAA 90 bp TGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGACACACTGGAGAGACTaGAAGGTGGGGGCTCTGCCC +
Preference number: 5 (lower is better)
Translates to: CSQGPVPTHWRDLKVGALTHWRD*KVGALP
Trigger: GGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGT...CAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CAA 90 bp GATCTGCTCATCCAGATCATCCCGGAACTCGTGCCGGATGCGCTGCACCTCCCGACACACTGGAGAGACTaGAAGGTGGGGGCTCTGCCC +
Preference number: 5 (lower is better)
Translates to: DLLIQIIPELVPDALHLPTHWRD*KVGALP
Trigger: GGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGT...CGGGAGGTGCAGCGCATCCGGCACGAGTTCCGGGATGATCTGGATGAGCAGATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS GCA 90 bp CCCAGGAGAAGAGCATGTGACGGATCTGCTCATCCAGATCATCCCTaGAGGCAGAGGATGGGCGACAGAGGGGTCCTGTCCACCTGCCCA +
Preference number: 5 (lower is better)
Translates to: PRRRACDGSAHPDHP*RQRMGDRGVLSTCP
Trigger: TGGGCAGGTGGACAGGACCCCTCTGTCGCCCATCCTCTGCCTGCAGGGATGATCTGGATGAGCAGATCCGTCACATGCTCTTCTCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527357.5
CDS CCA 90 bp CAGCAAAGCCGGGGTAGTGAGGCTTCAGTCCTGGTCCTGGAAATCTaGCCAATGGAGCCGTGGAGCTGCGAGGTCATAGGGGCTGTTCCC +
Preference number: 5 (lower is better)
Translates to: QQSRGSEASVLVLEI*PMEPWSCEVIGAVP
Trigger: GGGAACAGCCCCTATGACCTCGCAGCTCCACGGCTCCATTGGCCAGATTTCCAGGACCAGGACTGAAGCCTCACTACCCCGGCTTTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524486.5
CDS CCA 90 bp GACAACCATCACCCACAACCTTCCCCAGGAACAACATCTGCACTGTaGTCTGGAGAGACCCCCACTGGGCAGCGTCAGGGTCCAGGAGCC +
Preference number: 5 (lower is better)
Translates to: DNHHPQPSPGTTSAL*SGETPTGQRQGPGA
Trigger: GGCTCCTGGACCCTGACGCTGCCCAGTGGGGGTCTCTCCAGACCACAGTGCAGATGTTGTTCCTGGGGAAGGTTGTGGGTGATGGTTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000527357.5
ENST00000534525.5
CDS-3UTR CAA 90 bp GTTTTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGTCCAAGCTCAGCCGGTaGCCGCCCAGGAAAGGCAGC +
Preference number: 5 (lower is better)
Translates to: VLLLTGTRPHTLERLEGGSKLSR*PPRKGS
Trigger: GCTGCCTTTCCTGGGCGGCAACCGGCTGAGCTTGGA...CCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
CDS-3UTR CAA 90 bp ACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGAGTGTCTCCAGGCTGTaGAAGCTCAGGTCCAGGTGG +
Preference number: 5 (lower is better)
Translates to: TRPHTLERLEGGGSAHPLSVSRL*KLRSRW
Trigger: CCACCTGGACCTGAGCTTCAACAGCCTGGAGACACT...CAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
CDS-3UTR CAA 90 bp GTGCAGTTTTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGAGGTCCCGGAGCTGGTaGTCCCTCAGGTCGAGCCGG +
Preference number: 5 (lower is better)
Translates to: VQFCCSQGPVPTHWRDLKRSRSW*SLRSSR
Trigger: CCGGCTCGACCTGAGGGACAACCAGCTCCGGGACCT...CTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAAAACTGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
CDS-3UTR CAA 90 bp CTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGGCCAGGTCACCCCAGCTGTaGTCATTCCGGGTCCTGACC +
Preference number: 5 (lower is better)
Translates to: LERLEGGGSAHPLGNIWARSPQL*SFRVLT
Trigger: GGTCAGGACCCGGAATGACAACAGCTGGGGTGACCT...GGCCCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CAA 90 bp GATCTGCTCATCCAGATCATCCCGGAACTCGTGCCGGATGCGCTGCACCTCCCGCCTCCCACACAGTTCTaGGTGGTGTACCAGAGCCAG +
Preference number: 5 (lower is better)
Translates to: DLLIQIIPELVPDALHLPPPTQF*VVYQSQ
Trigger: CTGGCTCTGGTACACCACCAAGAACTGTGTGGGAGG...CGGGAGGTGCAGCGCATCCGGCACGAGTTCCGGGATGATCTGGATGAGCAGATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CAA 90 bp GATGCCGCGCTCGAAGGCCGCAAAGAACTCTTCGCCCTCGAACATCTCCACCGTGCCACACTCAGCAGGTaGCTCTGCGTCAGAAAGCCG +
Preference number: 5 (lower is better)
Translates to: DAALEGRKELFALEHLHRATLSR*LCVRKP
Trigger: CGGCTTTCTGACGCAGAGCAACCTGCTGAGTGTGGC...ACGGTGGAGATGTTCGAGGGCGAAGAGTTCTTTGCGGCCTTCGAGCGCGGCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CAA 90 bp TGGGGGCCAAGCCCATGCGTCGGATGCTGTCCTGGTACTTGCGGCGGCCGAGCTAGAAACAGTGCAGTTTaGTTGCTCACAGGGACCCGT +
Preference number: 5 (lower is better)
Translates to: WGPSPCVGCCPGTCGGRARNSAV*LLTGTR
Trigger: ACGGGTCCCTGTGAGCAACAAAACTGCACTGTTTCT...AGCTCGGCCGCCGCAAGTACCAGGACAGCATCCGACGCATGGGCTTGGCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CAA 90 bp GCAGGTTGCTCTGCGTCAGAAAGCCGGTCTCGGCATCTCCCAGATTCAAGGGTGTCCCAGATCGACCCTTaGAGGACCAGGGAGCGGAGG +
Preference number: 5 (lower is better)
Translates to: AGCSASESRSRHLPDSRVSQIDP*RTRERR
Trigger: CCTCCGCTCCCTGGTCCTCAAAGGGTCGATCTGGGA...CACCCTTGAATCTGGGAGATGCCGAGACCGGCTTTCTGACGCAGAGCAACCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
CDS CCA 90 bp GACCTCGCTATGAGCAGCAAAGCCGGGGTAGTGAGGCTTCAGTCCTaGTCCTGGAAATCTGGCCAATGGAGCCGTGGAGCTGCGAGGTCA +
Preference number: 5 (lower is better)
Translates to: DLAMSSKAGVVRLQS*SWKSGQWSRGAARS
Trigger: TGACCTCGCAGCTCCACGGCTCCATTGGCCAGATTTCCAGGACCAGGACTGAAGCCTCACTACCCCGGCTTTGCTGCTCATAGCGAGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524486.5
CDS-3UTR CAA 90 bp ACAGTGCAGTTTTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGTCCAAGCTCAGCCGGTaGCCGCCCAGGAAAGGCAGC +
Preference number: 5 (lower is better)
Translates to: TVQFCCSQGPVPTHWRDLSKLSR*PPRKGS
Trigger: GCTGCCTTTCCTGGGCGGCAACCGGCTGAGCTTGGA...CAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAAAACTGCACTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
CDS-3UTR CAA 90 bp AAACAGTGCAGTTTTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTCGGCGTTGCCCTCCTTaGAGGACCAGGGAGCGGAGG +
Preference number: 5 (lower is better)
Translates to: KQCSFVAHRDPSPHTGETRRCPP*RTRERR
Trigger: CCTCCGCTCCCTGGTCCTCAAAGGAGGGCAACGCCG...AGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAAAACTGCACTGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000347755.10
ENST00000411829.6
CDS-3UTR CAA 90 bp GAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGGCCAGCAGCGTCTGCAGGCGGTaGTGTGTCACTGTGAGGAAG +
Preference number: 5 (lower is better)
Translates to: ERLEGGGSAHPLGNIWASSVCRR*CVTVRK
Trigger: CTTCCTCACAGTGACACACAACCGCCTGCAGACGCT...GCTGGCCCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
CDS-3UTR CAA 90 bp TTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCAGCGTCTGCAGGCGGTaGTGTGTCACTGTGAGGAAG +
Preference number: 5 (lower is better)
Translates to: LLLTGTRPHTLERLEGGGSVCRR*CVTVRK
Trigger: CTTCCTCACAGTGACACACAACCGCCTGCAGACGCT...GCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
CDS-3UTR CAA 90 bp CACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGGAGGTCACCCCAGCTGTaGTCATTCCGGGTCCTGACC +
Preference number: 5 (lower is better)
Translates to: HWRDLKVGALPIHWGISGRSPQL*SFRVLT
Trigger: GGTCAGGACCCGGAATGACAACAGCTGGGGTGACCT...CCCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CAA 90 bp CACAGCAGTGTCCCCTCCGGTGGCACCAGGCAGGCATTGGACACAGGGCGGGAAAGAAACAGTGCAGTTTaGTTGCTCACAGGGACCCGT +
Preference number: 5 (lower is better)
Translates to: HSSVPSGGTRQALDTGRERNSAV*LLTGTR
Trigger: ACGGGTCCCTGTGAGCAACAAAACTGCACTGTTTCT...TTCCCGCCCTGTGTCCAATGCCTGCCTGGTGCCACCGGAGGGGACACTGCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
CDS CCA 90 bp GACCTTTCCTTTCCAGCCTGGTGTTTGCCCTTCCCCCACCTCCCCTaGAAGAAACTTCTGTCAGAATCAGGTGGGCCCTCCAGGCAGCCA +
Preference number: 5 (lower is better)
Translates to: DLSFPAWCLPFPHLP*KKLLSESGGPSRQP
Trigger: TGGCTGCCTGGAGGGCCCACCTGATTCTGACAGAAGTTTCTTCCAGGGGAGGTGGGGGAAGGGCAAACACCAGGCTGGAAAGGAAAGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527357.5
CDS-3UTR CAA 90 bp AGTGCAGTTTTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGCCCACCGACGGTCCTaGGAGGCCAGACATGTCCCA +
Preference number: 5 (lower is better)
Translates to: SAVLLLTGTRPHTLERLEAHRRS*EARHVP
Trigger: TGGGACATGTCTGGCCTCCAAGGACCGTCGGTGGGC...TTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAAAACTGCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
CDS-3UTR CAA 90 bp AGTGCAGTTTTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAAGGCTCTGCAGCCGGTaGGAGGCCAGGTTGAGCTCC +
Preference number: 5 (lower is better)
Translates to: SAVLLLTGTRPHTLERLERLCSR*EARLSS
Trigger: GGAGCTCAACCTGGCCTCCAACCGGCTGCAGAGCCT...TTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAAAACTGCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
CDS-3UTR CAA 90 bp ACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGAGGTCACCCCAGCTGTaGTCATTCCGGGTCCTGACC +
Preference number: 5 (lower is better)
Translates to: TLERLEGGGSAHPLGNIWRSPQL*SFRVLT
Trigger: GGTCAGGACCCGGAATGACAACAGCTGGGGTGACCT...CCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CAA 90 bp AGTGCAGTTTTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAAGGGTGGCGTCCACCTaGTTTCGGGGCAGGCACTGC +
Preference number: 5 (lower is better)
Translates to: SAVLLLTGTRPHTLERLERVAST*FRGRHC
Trigger: GCAGTGCCTGCCCCGAAACAAGGTGGACGCCACCCT...TTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAAAACTGCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CAA 90 bp CTCAGCAGGTTGCTCTGCGTCAGAAAGCCGGTCTCGGCATCTCCCAGATTCAAGACACACTGGAGAGACTaGAAGGTGGGGGCTCTGCCC +
Preference number: 5 (lower is better)
Translates to: LSRLLCVRKPVSASPRFKTHWRD*KVGALP
Trigger: GGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGT...CTTGAATCTGGGAGATGCCGAGACCGGCTTTCTGACGCAGAGCAACCTGCTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CAA 90 bp CCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGAGAAACAGTGCAGTTTaGTTGCTCACAGGGACCCGT +
Preference number: 5 (lower is better)
Translates to: PVPTHWRDLKVGALPIHWRNSAV*LLTGTR
Trigger: ACGGGTCCCTGTGAGCAACAAAACTGCACTGTTTCT...CCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CAA 90 bp ACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGAGTGTCTCCAGGCTGTaGAAGCTCAGGTCCAGGTGG +
Preference number: 5 (lower is better)
Translates to: TLERLEGGGSAHPLGNIWSVSRL*KLRSRW
Trigger: CCACCTGGACCTGAGCTTCAACAGCCTGGAGACACT...CCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
CDS-3UTR CAA 90 bp GTTTTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGCCTCCCACACAGTTCTaGGTGGTGTACCAGAGCCAG +
Preference number: 5 (lower is better)
Translates to: VLLLTGTRPHTLERLEGGPPTQF*VVYQSQ
Trigger: CTGGCTCTGGTACACCACCAAGAACTGTGTGGGAGG...CCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CAA 90 bp TTTTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGCCTCCCACACAGTTCTaGGTGGTGTACCAGAGCCAG +
Preference number: 5 (lower is better)
Translates to: FCCSQGPVPTHWRDLKVGPPTQF*VVYQSQ
Trigger: CTGGCTCTGGTACACCACCAAGAACTGTGTGGGAGG...CCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CAA 90 bp CTCAGCAGGTTGCTCTGCGTCAGAAAGCCGGTCTCGGCATCTCCCAGATTCAAGCCTCCCACACAGTTCTaGGTGGTGTACCAGAGCCAG +
Preference number: 5 (lower is better)
Translates to: LSRLLCVRKPVSASPRFKPPTQF*VVYQSQ
Trigger: CTGGCTCTGGTACACCACCAAGAACTGTGTGGGAGG...CTTGAATCTGGGAGATGCCGAGACCGGCTTTCTGACGCAGAGCAACCTGCTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CAA 90 bp GTGCAGTTTTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGCCACACTCAGCAGGTaGCTCTGCGTCAGAAAGCCG +
Preference number: 5 (lower is better)
Translates to: VQFCCSQGPVPTHWRDLKATLSR*LCVRKP
Trigger: CGGCTTTCTGACGCAGAGCAACCTGCTGAGTGTGGC...CTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAAAACTGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS-3UTR CAA 90 bp ACAGGGACCCGTCCCCACACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATAGAAACAGTGCAGTTTaGTTGCTCACAGGGACCCGT +
Preference number: 5 (lower is better)
Translates to: TGTRPHTLERLEGGGSAHRNSAV*LLTGTR
Trigger: ACGGGTCCCTGTGAGCAACAAAACTGCACTGTTTCT...ATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS TCA 90 bp GCAAATGGAAGGAGGCAGGGGTGGAGACCACCGGCTCATCTCAGCTaGCAACCATCACCCACAACCTTCCCCAGGAACAACATCTGCACT +
Preference number: 5 (lower is better)
Translates to: ANGRRQGWRPPAHLS*QPSPTTFPRNNICT
Trigger: AGTGCAGATGTTGTTCCTGGGGAAGGTTGTGGGTGATGGTTGTCAGCTGAGATGAGCCGGTGGTCTCCACCCCTGCCTCCTTCCATTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527357.5
ENST00000534525.5
CDS-3UTR CAA 90 bp CCTTCACATTCTTCAGGTGCGAGTAGAAGACAAAGCAGATTCTGCCCTCCACACTCCAAGCTCAGCCGGTaGCCGCCCAGGAAAGGCAGC +
Preference number: 5 (lower is better)
Translates to: PSHSSGASRRQSRFCPPHSKLSR*PPRKGS
Trigger: GCTGCCTTTCCTGGGCGGCAACCGGCTGAGCTTGGA...GTGTGGAGGGCAGAATCTGCTTTGTCTTCTACTCGCACCTGAAGAATGTGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
CDS-3UTR CAA 90 bp CTTGAGGGGTCACAGGAAAGCTGTCCAAATCTGAGGTCAGGAACAGTCTGGGCAGGTGGGCCCTTCTCTTaGGGGAAACAGGGACTCTGG +
Preference number: 5 (lower is better)
Translates to: LEGSQESCPNLRSGTVWAGGPFS*GKQGLW
Trigger: CCAGAGTCCCTGTTTCCCCAAAGAGAAGGGCCCACC...TGCCCAGACTGTTCCTGACCTCAGATTTGGACAGCTTTCCTGTGACCCCTCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524486.5
ENST00000525028.6
CDS-3UTR CAA 90 bp AACAGTGCAGTTTTGTTGCTCACAGGGACCCGTCCCCACACACTGGAGAGACTTAGCGTCTGCAGGCGGTaGTGTGTCACTGTGAGGAAG +
Preference number: 5 (lower is better)
Translates to: NSAVLLLTGTRPHTLERLSVCRR*CVTVRK
Trigger: CTTCCTCACAGTGACACACAACCGCCTGCAGACGCT...AAGTCTCTCCAGTGTGTGGGGACGGGTCCCTGTGAGCAACAAAACTGCACTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
CDS-3UTR CAA 90 bp ACACTGGAGAGACTTGAAGGTGGGGGCTCTGCCCATCCACTGGGGAATATCTGGAGAAACAGTGCAGTTTaGTTGCTCACAGGGACCCGT +
Preference number: 5 (lower is better)
Translates to: TLERLEGGGSAHPLGNIWRNSAV*LLTGTR
Trigger: ACGGGTCCCTGTGAGCAACAAAACTGCACTGTTTCT...CCAGATATTCCCCAGTGGATGGGCAGAGCCCCCACCTTCAAGTCTCTCCAGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000531286.5
CDS CCA 72 bp TCCAGGCAGCGCCCGGGGAAGCTCACTGAGCCCGGCTaGACGTGGGACCACCGGTCGCCGCGGCCAGGGAAC +
Preference number: 6 (lower is better)
Translates to: SRQRPGKLTEPG*TWDHRSPRPGN
Trigger: GTTCCCTGGCCGCGGCGACCGGTGGTCCCACGTCCAGCCGGGCTCAGTGAGCTTCCCCGGGCGCTGCCTGGA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534525.5
CDS GCA 72 bp CCAAGGAGTCAAGGCGAGCCTACCGCCAGCAGCTTCTaGCCGGGCCCACGCGCCGTTCCGGGTAGGCCCGCG +
Preference number: 6 (lower is better)
Translates to: PRSQGEPTASSF*PGPRAVPGRPA
Trigger: CGCGGGCCTACCCGGAACGGCGCGTGGGCCCGGGCAGAAGCTGCTGGCGGTAGGCTCGCCTTGACTCCTTGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530911.1
CDS CCA 72 bp CAGCGCCCGGGGAAGCTCACTGAGCCCGGCTGGACGTaGGACCACCGGTCGCCGCGGCCAGGGAACCACCAA +
Preference number: 6 (lower is better)
Translates to: QRPGKLTEPGWT*DHRSPRPGNHQ
Trigger: TTGGTGGTTCCCTGGCCGCGGCGACCGGTGGTCCCACGTCCAGCCGGGCTCAGTGAGCTTCCCCGGGCGCTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534525.5
CDS GCA 72 bp GGCAGCCCCCGGGGTACAGGTCCAAGCTCAGCCGGTTaGCGCCCAGGAAAGGCAGCGCCCTGGACCCTGCGT +
Preference number: 6 (lower is better)
Translates to: GSPRGTGPSSAG*RPGKAAPWTLR
Trigger: ACGCAGGGTCCAGGGCGCTGCCTTTCCTGGGCGGCAACCGGCTGAGCTTGGACCTGTACCCCGGGGGCTGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000527357.5
ENST00000534525.5
ENST00000534649.2
CDS CAA 72 bp TGGCAGCCCCCGGGGTACAGGTCCAAGCTCAGCCGGTaGCCGCCCAGGAAAGGCAGCGCCCTGGACCCTGCG +
Preference number: 6 (lower is better)
Translates to: WQPPGYRSKLSR*PPRKGSALDPA
Trigger: CGCAGGGTCCAGGGCGCTGCCTTTCCTGGGCGGCAACCGGCTGAGCTTGGACCTGTACCCCGGGGGCTGCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000527357.5
ENST00000534525.5
ENST00000534649.2
CDS GCA 72 bp GCGGGCAGTGGGAGCCTCACCGGAACTCGTGCCGGATaGGCTGCACCTCCCGGTAGGACACCCCCAGGTGCA +
Preference number: 6 (lower is better)
Translates to: AGSGSLTGTRAG*AAPPGRTPPGA
Trigger: TGCACCTGGGGGTGTCCTACCGGGAGGTGCAGCGCATCCGGCACGAGTTCCGGTGAGGCTCCCACTGCCCGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527357.5
CDS CCA 72 bp GGCAGCAGCTCTCCACTCGCCACCGGCAGGCCTGGGTaGCCCTCACCTGGGGTGCCTCTTCCTCCAGGTAGG +
Preference number: 6 (lower is better)
Translates to: GSSSPLATGRPG*PSPGVPLPPGR
Trigger: CCTACCTGGAGGAAGAGGCACCCCAGGTGAGGGCCACCCAGGCCTGCCGGTGGCGAGTGGAGAGCTGCTGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527357.5
CDS CCA 72 bp TCAGGGCAGCAGCTCTCCACTCGCCACCGGCAGGCCTaGGTGGCCCTCACCTGGGGTGCCTCTTCCTCCAGG +
Preference number: 6 (lower is better)
Translates to: SGQQLSTRHRQA*VALTWGASSSR
Trigger: CCTGGAGGAAGAGGCACCCCAGGTGAGGGCCACCCAGGCCTGCCGGTGGCGAGTGGAGAGCTGCTGCCCTGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527357.5
CDS CAA 72 bp AAGGTTGAGTCCCGGGCGTGGCGGCCGCGCTCCATGTaGGGAGCTGTAGGCGCCGCGTGGCATGCTGGGGGT +
Preference number: 6 (lower is better)
Translates to: KVESRAWRPRSM*GAVGAAWHAGG
Trigger: ACCCCCAGCATGCCACGCGGCGCCTACAGCTCCCAACATGGAGCGCGGCCGCCACGCCCGGGACTCAACCTT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530911.1
CDS CAA 90 bp AGCAGCTGCTGGCAGCCCCCGGGGTACAGGTCCAAGCTCAGCCGGTaGCCGCCCAGGAAAGGCAGCGCCCTGGACCCTGCGTCCGAATCC +
Preference number: 6 (lower is better)
Translates to: SSCWQPPGYRSKLSR*PPRKGSALDPASES
Trigger: GGATTCGGACGCAGGGTCCAGGGCGCTGCCTTTCCTGGGCGGCAACCGGCTGAGCTTGGACCTGTACCCCGGGGGCTGCCAGCAGCTGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000527357.5
ENST00000534525.5
ENST00000534649.2
CDS CAA 90 bp AGCTCTGGCCCCTCCACCGTTGCAGCCATCGCCCACCGACGGTCCTaGGAGGCCAGACATGTCCCAGCACGCAGGCAGGCCTGTCCAGGC +
Preference number: 6 (lower is better)
Translates to: SSGPSTVAAIAHRRS*EARHVPARRQACPG
Trigger: GCCTGGACAGGCCTGCCTGCGTGCTGGGACATGTCTGGCCTCCAAGGACCGTCGGTGGGCGATGGCTGCAACGGTGGAGGGGCCAGAGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000527357.5
ENST00000534525.5
ENST00000534649.2
CDS CAA 90 bp TCGCTGGCAAAGGTTGAGTCCCGGGCGTGGCGGCCGCGCTCCATGTaGGGAGCTGTAGGCGCCGCGTGGCATGCTGGGGGTGCTAGGTAC +
Preference number: 6 (lower is better)
Translates to: SLAKVESRAWRPRSM*GAVGAAWHAGGARY
Trigger: GTACCTAGCACCCCCAGCATGCCACGCGGCGCCTACAGCTCCCAACATGGAGCGCGGCCGCCACGCCCGGGACTCAACCTTTGCCAGCGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530911.1
CDS CAA 72 bp CCCTCCACCGTTGCAGCCATCGCCCACCGACGGTCCTaGGAGGCCAGACATGTCCCAGCACGCAGGCAGGCC +
Preference number: 6 (lower is better)
Translates to: PSTVAAIAHRRS*EARHVPARRQA
Trigger: GGCCTGCCTGCGTGCTGGGACATGTCTGGCCTCCAAGGACCGTCGGTGGGCGATGGCTGCAACGGTGGAGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000527357.5
ENST00000534525.5
ENST00000534649.2
CDS CCA 72 bp CCTCCACCGTTGCAGCCATCGCCCACCGACGGTCCTTaGAGGCCAGACATGTCCCAGCACGCAGGCAGGCCT +
Preference number: 6 (lower is better)
Translates to: PPPLQPSPTDGP*RPDMSQHAGRP
Trigger: AGGCCTGCCTGCGTGCTGGGACATGTCTGGCCTCCAAGGACCGTCGGTGGGCGATGGCTGCAACGGTGGAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000527357.5
ENST00000534525.5
ENST00000534649.2
CDS CCA 72 bp GAGGAAACCTCTCCCGGCCTTTCCAGTTCGGTCCACTaGGGAGGGTGGTGCACCGCGCACCGCTCAGACGGC +
Preference number: 6 (lower is better)
Translates to: EETSPGLSSSVH*GGWCTAHRSDG
Trigger: GCCGTCTGAGCGGTGCGCGGTGCACCACCCTCCCCAGTGGACCGAACTGGAAAGGCCGGGAGAGGTTTCCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524486.5
CDS CCA 72 bp CACTCTGCCTCGGAGTGTGGGGGAGTTCCCGGCTCCTaGGGCCAGGTGCGGCCAGACCTTTCCTTTCCAGCC +
Preference number: 6 (lower is better)
Translates to: HSASECGGVPGS*GQVRPDLSFPA
Trigger: GGCTGGAAAGGAAAGGTCTGGCCGCACCTGGCCCCAGGAGCCGGGAACTCCCCCACACTCCGAGGCAGAGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527357.5
CDS CCA 72 bp AGAGCAAGACTCCGTCTCACTGAGCCCGGCTGGACGTaGGACCACCGGTCGCCGCGGCCAGGGAACCACCAA +
Preference number: 6 (lower is better)
Translates to: RARLRLTEPGWT*DHRSPRPGNHQ
Trigger: TTGGTGGTTCCCTGGCCGCGGCGACCGGTGGTCCCACGTCCAGCCGGGCTCAGTGAGACGGAGTCTTGCTCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530911.1
CDS CAA 90 bp CGCAGCCGCTCCCAGGCCTTCCGAGCCAGGCCTCCCACACAGTTCTaGGTGGTGTACCAGAGCCAGTACCTGGGAGAGCTGGGGGTGAGG +
Preference number: 6 (lower is better)
Translates to: RSRSQAFRARPPTQF*VVYQSQYLGELGVR
Trigger: CCTCACCCCCAGCTCTCCCAGGTACTGGCTCTGGTACACCACCAAGAACTGTGTGGGAGGCCTGGCTCGGAAGGCCTGGGAGCGGCTGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000527357.5
ENST00000534525.5
CDS GCA 72 bp AGCTCCAAGACTGCGCGCACCTCTTCAGCCACGTCCTaGCGGTCACTCTGCTCCAGGGCCTGCAGCTCTCGG +
Preference number: 6 (lower is better)
Translates to: SSKTARTSSATS*RSLCSRACSSR
Trigger: CCGAGAGCTGCAGGCCCTGGAGCAGAGTGACCGGCAGGACGTGGCTGAAGAGGTGCGCGCAGTCTTGGAGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527812.1
CDS CCA 72 bp CCGAAAGTCAGGGAAGGCCGTGTAAGGGTGAGGGCCTaGGGCGTGAGCCATTGGGCAGCTTCGGGGTCCTGG +
Preference number: 6 (lower is better)
Translates to: PKVREGRVRVRA*GVSHWAASGSW
Trigger: CCAGGACCCCGAAGCTGCCCAATGGCTCACGCCCCAGGCCCTCACCCTTACACGGCCTTCCCTGACTTTCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524486.5
CDS CCA 72 bp ACTTGCAGTTCGCTGGCAAAGGTTGAGTCCCGGGCGTaGCGGCCGCGCTCCATGTTGGGAGCTGTAGGCGCC +
Preference number: 6 (lower is better)
Translates to: TCSSLAKVESRA*RPRSMLGAVGA
Trigger: GGCGCCTACAGCTCCCAACATGGAGCGCGGCCGCCACGCCCGGGACTCAACCTTTGCCAGCGAACTGCAAGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530911.1
CDS GCA 72 bp AGGTCCCAGATCGACCCTGCCAGCCAGAGAAACAGCTaGTCGAGAGGCACAGACCTCCCACCCCACCCCCAC +
Preference number: 6 (lower is better)
Translates to: RSQIDPASQRNS*SRGTDLPPHPH
Trigger: GTGGGGGTGGGGTGGGAGGTCTGTGCCTCTCGAGCAGCTGTTTCTCTGGCTGGCAGGGTCGATCTGGGACCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000527357.5
ENST00000534525.5
CDS CCA 72 bp AGCTCAGCCGGTTGCCGCCCAGGAAAGGCAGCGCCCTaGACCCTGCGTCCGAATCCTCTGAAGCATCTCCTG +
Preference number: 6 (lower is better)
Translates to: SSAGCRPGKAAP*TLRPNPLKHLL
Trigger: CAGGAGATGCTTCAGAGGATTCGGACGCAGGGTCCAGGGCGCTGCCTTTCCTGGGCGGCAACCGGCTGAGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000527357.5
ENST00000534525.5
ENST00000534649.2
CDS CCA 72 bp AACAACATCTGCACTGTGGTCTGGAGAGACCCCCACTaGGCAGCGTCAGGGTCCAGGAGCCAGGGCCCAGCC +
Preference number: 6 (lower is better)
Translates to: NNICTVVWRDPH*AASGSRSQGPA
Trigger: GGCTGGGCCCTGGCTCCTGGACCCTGACGCTGCCCAGTGGGGGTCTCTCCAGACCACAGTGCAGATGTTGTT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000527357.5
ENST00000534525.5
CDS CAA 90 bp CGCAGCCGCTCCCAGGCCTTCCGAGCCAGGCCTCCCACACAGTTCTaGGTGGTGTACCAGAGCCAGTACCTGGAAGCGTGCGTACAGGTG +
Preference number: 6 (lower is better)
Translates to: RSRSQAFRARPPTQF*VVYQSQYLEACVQV
Trigger: CACCTGTACGCACGCTTCCAGGTACTGGCTCTGGTACACCACCAAGAACTGTGTGGGAGGCCTGGCTCGGAAGGCCTGGGAGCGGCTGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531286.5
CDS GCA 72 bp CCCTCAGAGCCAGGGTCCGAGGTCCCAGATCGACCCTaGCAGCCAGAGAAACAGCTGCTCGAGAGGCACAGA +
Preference number: 6 (lower is better)
Translates to: PSEPGSEVPDRP*QPEKQLLERHR
Trigger: TCTGTGCCTCTCGAGCAGCTGTTTCTCTGGCTGGCAGGGTCGATCTGGGACCTCGGACCCTGGCTCTGAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527357.5
ENST00000534525.5
CDS CCA 72 bp CCCAGGCCTTCCGAGCCAGGCCTCCCACACAGTTCTTaGTGGTGTACCAGAGCCAGTACCTGGGAGAGCTGG +
Preference number: 6 (lower is better)
Translates to: PRPSEPGLPHSS*WCTRASTWESW
Trigger: CCAGCTCTCCCAGGTACTGGCTCTGGTACACCACCAAGAACTGTGTGGGAGGCCTGGCTCGGAAGGCCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527357.5
ENST00000534525.5
CDS CCA 72 bp CCCAGGCCTTCCGAGCCAGGCCTCCCACACAGTTCTTaGTGGTGTACCAGAGCCAGTACCTGGAAGCGTGCG +
Preference number: 6 (lower is better)
Translates to: PRPSEPGLPHSS*WCTRASTWKRA
Trigger: CGCACGCTTCCAGGTACTGGCTCTGGTACACCACCAAGAACTGTGTGGGAGGCCTGGCTCGGAAGGCCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531286.5
CDS CCA 72 bp GGGGGTGCTAGGTACCGAAGGCAGATGCCGTCCCTTTaGACTCGCTTCGTCCAACGCCCCCACGAGTTTCGG +
Preference number: 6 (lower is better)
Translates to: GGARYRRQMPSL*TRFVQRPHEFR
Trigger: CCGAAACTCGTGGGGGCGTTGGACGAAGCGAGTCCAAAGGGACGGCATCTGCCTTCGGTACCTAGCACCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000530911.1
CDS GCA 72 bp CCAGGGTGGCCTCCAGCAGCTGAGGGTCCTCGTGAGTaGTCAGACGCAAGAATTCCACCTGCAGCAGCTGCA +
Preference number: 6 (lower is better)
Translates to: PGWPPAAEGPRE*SDARIPPAAAA
Trigger: TGCAGCTGCTGCAGGTGGAATTCTTGCGTCTGAGCACTCACGAGGACCCTCAGCTGCTGGAGGCCACCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347755.10
ENST00000411829.6
ENST00000524486.5
ENST00000525028.6
ENST00000527357.5
ENST00000534525.5
ENST00000534649.2
CDS CAA 72 bp TCCCAGGCCTTCCGAGCCAGGCCTCCCACACAGTTCTaGGTGGTGTACCAGAGCCAGTACCTGGGAGAGCTG +
Preference number: 6 (lower is better)
Translates to: SQAFRARPPTQF*VVYQSQYLGEL
Trigger: CAGCTCTCCCAGGTACTGGCTCTGGTACACCACCAAGAACTGTGTGGGAGGCCTGGCTCGGAAGGCCTGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527357.5
ENST00000534525.5
CDS CAA 72 bp TCCCAGGCCTTCCGAGCCAGGCCTCCCACACAGTTCTaGGTGGTGTACCAGAGCCAGTACCTGGAAGCGTGC +
Preference number: 6 (lower is better)
Translates to: SQAFRARPPTQF*VVYQSQYLEAC
Trigger: GCACGCTTCCAGGTACTGGCTCTGGTACACCACCAAGAACTGTGTGGGAGGCCTGGCTCGGAAGGCCTGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531286.5
CDS GCA 72 bp CTGGTCCTGGAAATCTGGCCAATGGAGCCGTGGAGCTaGGAGGTCATAGGGGCTGTTCCCCAGTCCTGGAGA +
Preference number: 6 (lower is better)
Translates to: LVLEIWPMEPWS*EVIGAVPQSWR
Trigger: TCTCCAGGACTGGGGAACAGCCCCTATGACCTCGCAGCTCCACGGCTCCATTGGCCAGATTTCCAGGACCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524486.5
CDS CCA 72 bp TCAGTCCTGGTCCTGGAAATCTGGCCAATGGAGCCGTaGAGCTGCGAGGTCATAGGGGCTGTTCCCCAGTCC +
Preference number: 6 (lower is better)
Translates to: SVLVLEIWPMEP*SCEVIGAVPQS
Trigger: GGACTGGGGAACAGCCCCTATGACCTCGCAGCTCCACGGCTCCATTGGCCAGATTTCCAGGACCAGGACTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524486.5
CDS CCA 72 bp CGGGGTAGTGAGGCTTCAGTCCTGGTCCTGGAAATCTaGCCAATGGAGCCGTGGAGCTGCGAGGTCATAGGG +
Preference number: 6 (lower is better)
Translates to: RGSEASVLVLEI*PMEPWSCEVIG
Trigger: CCCTATGACCTCGCAGCTCCACGGCTCCATTGGCCAGATTTCCAGGACCAGGACTGAAGCCTCACTACCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524486.5
CDS CCA 72 bp ACTGGGGGTGGTGATCACCGAGGATGGCGATGGGGCTaGACAGGACCAAGAGCAGAACAGTTCACACCTGGG +
Preference number: 6 (lower is better)
Translates to: TGGGDHRGWRWG*TGPRAEQFTPG
Trigger: CCCAGGTGTGAACTGTTCTGCTCTTGGTCCTGTCCAGCCCCATCGCCATCCTCGGTGATCACCACCCCCAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000527357.5
ENST00000534525.5
CDS CCA 72 bp ACAACCTTCCCCAGGAACAACATCTGCACTGTGGTCTaGAGAGACCCCCACTGGGCAGCGTCAGGGTCCAGG +
Preference number: 6 (lower is better)
Translates to: TTFPRNNICTVV*RDPHWAASGSR
Trigger: CCTGGACCCTGACGCTGCCCAGTGGGGGTCTCTCCAGACCACAGTGCAGATGTTGTTCCTGGGGAAGGTTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000527357.5
ENST00000534525.5
CDS CCA 72 bp CACCCACAACCTTCCCCAGGAACAACATCTGCACTGTaGTCTGGAGAGACCCCCACTGGGCAGCGTCAGGGT +
Preference number: 6 (lower is better)
Translates to: HPQPSPGTTSAL*SGETPTGQRQG
Trigger: ACCCTGACGCTGCCCAGTGGGGGTCTCTCCAGACCACAGTGCAGATGTTGTTCCTGGGGAAGGTTGTGGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000527357.5
ENST00000534525.5
CDS CCA 72 bp ATGAGCAGCAAAGCCGGGGTAGTGAGGCTTCAGTCCTaGTCCTGGAAATCTGGCCAATGGAGCCGTGGAGCT +
Preference number: 6 (lower is better)
Translates to: MSSKAGVVRLQS*SWKSGQWSRGA
Trigger: AGCTCCACGGCTCCATTGGCCAGATTTCCAGGACCAGGACTGAAGCCTCACTACCCCGGCTTTGCTGCTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524486.5
CDS GCA 72 bp CCTCGGACCCTCGAAGTCTCTGTTGGAAGGAAAAAGTaGATTAAGCCCTGGGCTCCACCCCCAACTCCACCA +
Preference number: 6 (lower is better)
Translates to: PRTLEVSVGRKK*IKPWAPPPTPP
Trigger: TGGTGGAGTTGGGGGTGGAGCCCAGGGCTTAATGCACTTTTTCCTTCCAACAGAGACTTCGAGGGTCCGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000527357.5
ENST00000534525.5
ENST00000534649.2