RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PI16 (Homo sapiens)

Ensembl gene IDs: ENSG00000164530

Ensembl transcript IDs: ENST00000373674.4, ENST00000491324.1, ENST00000611814.4, ENST00000647861.1

Found 277 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CCA 90 bp CCACAGGTTGGACAGGTTTTTATTGGAGAGTCAGGAGTTACTTTCCTTCCCTCGAGCGCACATGCTGTGTaGGCAGACAGCCCCAGGCCA +
Preference number: 2 (lower is better)
Translates to: PQVGQVFIGESGVTFLPSSAHAV*ADSPRP
Trigger: TGGCCTGGGGCTGTCTGCCCACACAGCATGTGCGCT...CGAGGGAAGGAAAGTAACTCCTGACTCTCCAATAAAAACCTGTCCAACCTGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373674.4
ENST00000611814.4
3UTR-3UTR TCA 90 bp CCACAGGTTGGACAGGTTTTTATTGGAGAGTCAGGAGTTACTTTCCTTCCCTCGAGGCCAGGTAGGCAGTaGGCTCCCTCAAATCCTCCC +
Preference number: 2 (lower is better)
Translates to: PQVGQVFIGESGVTFLPSRPGRQ*APSNPP
Trigger: GGGAGGATTTGAGGGAGCTCACTGCCTACCTGGCCT...CGAGGGAAGGAAAGTAACTCCTGACTCTCCAATAAAAACCTGTCCAACCTGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373674.4
ENST00000611814.4
CDS-3UTR GCA 90 bp GGGGCAGGAGAGGTGTGGGCCCGGTGTGCAGTCCTCAGGCGGCCTCCTGAGCTCGGTGTGGGCCCGGTGTaGAGTCCTCAGGCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: GAGEVWARCAVLRRPPELGVGPV*SPQAAS
Trigger: GGAGGCCGCCTGAGGACTGCACACCGGGCCCACACC...GAGCTCAGGAGGCCGCCTGAGGACTGCACACCGGGCCCACACCTCTCCTGCCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CCA 90 bp GGGGCAGGAGAGGTGTGGGCCCGGTGTGCAGTCCTCAGGCGGCCTCCTGAGCTCGCCGTGCGTAGGCCTTaGCGAAGGCGGCCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: GAGEVWARCAVLRRPPELAVRRP*RRRPAP
Trigger: AGGAGCTGGCCGCCTTCGCCAAGGCCTACGCACGGC...GAGCTCAGGAGGCCGCCTGAGGACTGCACACCGGGCCCACACCTCTCCTGCCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR TCA 90 bp GGGGCAGGAGAGGTGTGGGCCCGGTGTGCAGTCCTCAGGCGGCCTCCTGAGCTCAGTGGGGGCCGTGTTTaGGGCCCAGCCCGACTCACA +
Preference number: 4 (lower is better)
Translates to: GAGEVWARCAVLRRPPELSGGRV*GPARLT
Trigger: TGTGAGTCGGGCTGGGCCTCAAACACGGCCCCCACT...GAGCTCAGGAGGCCGCCTGAGGACTGCACACCGGGCCCACACCTCTCCTGCCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647861.1
CDS-3UTR GCA 90 bp GGGGCAGGAGAGGTGTGGGCCCGGTGTGCAGTCCTCAGGCGGCCTCCTGAGCTCCCACACGCACTGCCGTaGGTAGGCCTTGGCGAAGGC +
Preference number: 4 (lower is better)
Translates to: GAGEVWARCAVLRRPPELPHALP*VGLGEG
Trigger: GCCTTCGCCAAGGCCTACGCACGGCAGTGCGTGTGG...GAGCTCAGGAGGCCGCCTGAGGACTGCACACCGGGCCCACACCTCTCCTGCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CCA 90 bp GGGGCAGGAGAGGTGTGGGCCCGGTGTGCAGTCCTCAGGCGGCCTCCTGAGCTCCCGCGCTCCTTGTTGTaGCCCCACACGCACTGCCGT +
Preference number: 4 (lower is better)
Translates to: GAGEVWARCAVLRRPPELPRSLL*PHTHCR
Trigger: ACGGCAGTGCGTGTGGGGCCACAACAAGGAGCGCGG...GAGCTCAGGAGGCCGCCTGAGGACTGCACACCGGGCCCACACCTCTCCTGCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR TCA 90 bp GGGGCAGGAGAGGTGTGGGCCCGGTGTGCAGTCCTCAGGCGGCCTCCTGAGCTCTGCAGGTGGCGGCGCTaGGGTTGTAGTGCTCACGCT +
Preference number: 4 (lower is better)
Translates to: GAGEVWARCAVLRRPPELCRWRR*GCSAHA
Trigger: AGCGTGAGCACTACAACCTCAGCGCCGCCACCTGCA...GAGCTCAGGAGGCCGCCTGAGGACTGCACACCGGGCCCACACCTCTCCTGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR GCA 90 bp GGGGCAGGAGAGGTGTGGGCCCGGTGTGCAGTCCTCAGGCGGCCTCCTGAGCTCTGCTCACGCTCGTGGTaGCACTCCTCCATGGCCAGC +
Preference number: 4 (lower is better)
Translates to: GAGEVWARCAVLRRPPELCSRSW*HSSMAS
Trigger: GCTGGCCATGGAGGAGTGGCACCACGAGCGTGAGCA...GAGCTCAGGAGGCCGCCTGAGGACTGCACACCGGGCCCACACCTCTCCTGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CCA 90 bp GGGGCAGGAGAGGTGTGGGCCCGGTGTGCAGTCCTCAGGCGGCCTCCTGAGCTCTGCAGGAGCCGTGCATaGTGGCCAGCCGTCTCTCCT +
Preference number: 4 (lower is better)
Translates to: GAGEVWARCAVLRRPPELCRSRA*WPAVSP
Trigger: AGGAGAGACGGCTGGCCACCATGCACGGCTCCTGCA...GAGCTCAGGAGGCCGCCTGAGGACTGCACACCGGGCCCACACCTCTCCTGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CCA 90 bp GGGGCAGGAGAGGTGTGGGCCCGGTGTGCAGTCCTCAGGCGGCCTCCTGAGCTCCTCCAACGGGGCCTGTaGTGGCCACCAGCAGTAGCA +
Preference number: 4 (lower is better)
Translates to: GAGEVWARCAVLRRPPELLQRGL*WPPAVA
Trigger: TGCTACTGCTGGTGGCCACCACAGGCCCCGTTGGAG...GAGCTCAGGAGGCCGCCTGAGGACTGCACACCGGGCCCACACCTCTCCTGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CCA 90 bp GGGGCAGGAGAGGTGTGGGCCCGGTGTGCAGTCCTCAGGCGGCCTCCTGAGCTCGCCTCCTCCTGGGCATaGGGTAGGAGTTCCCTTGCC +
Preference number: 4 (lower is better)
Translates to: GAGEVWARCAVLRRPPELASSWA*GRSSLA
Trigger: GGCAAGGGAACTCCTACCCCATGCCCAGGAGGAGGC...GAGCTCAGGAGGCCGCCTGAGGACTGCACACCGGGCCCACACCTCTCCTGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CCA 90 bp GGGGCAGGAGAGGTGTGGGCCCGGTGTGCAGTCCTCAGGCGGCCTCCTGAGCTCCCGTGTGGTCCAGTGTaGCCTGCAGCTCACCTGGCT +
Preference number: 4 (lower is better)
Translates to: GAGEVWARCAVLRRPPELPCGPV*PAAHLA
Trigger: AGCCAGGTGAGCTGCAGGCCACACTGGACCACACGG...GAGCTCAGGAGGCCGCCTGAGGACTGCACACCGGGCCCACACCTCTCCTGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CCA 90 bp GGGGCAGGAGAGGTGTGGGCCCGGTGTGCAGTCCTCAGGCGGCCTCCTGAGCTCAGGGCCCTCTGCACCTaGCAAGGACGACTGCAGAGC +
Preference number: 4 (lower is better)
Translates to: GAGEVWARCAVLRRPPELRALCT*QGRLQS
Trigger: GCTCTGCAGTCGTCCTTGCCAGGTGCAGAGGGCCCT...GAGCTCAGGAGGCCGCCTGAGGACTGCACACCGGGCCCACACCTCTCCTGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CCA 90 bp GGGGCAGGAGAGGTGTGGGCCCGGTGTGCAGTCCTCAGGCGGCCTCCTGAGCTCAGCGCACATGCTGTGTaGGCAGACAGCCCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: GAGEVWARCAVLRRPPELSAHAV*ADSPRP
Trigger: TGGCCTGGGGCTGTCTGCCCACACAGCATGTGCGCT...GAGCTCAGGAGGCCGCCTGAGGACTGCACACCGGGCCCACACCTCTCCTGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CCA 90 bp GGGGCAGGAGAGGTGTGGGCCCGGTGTGCAGTCCTCAGGCGGCCTCCTGAGCTCGAGGGCTGGGCGCTTTaGGTCCCGACCAGCATCAAG +
Preference number: 4 (lower is better)
Translates to: GAGEVWARCAVLRRPPELEGWAL*VPTSIK
Trigger: CTTGATGCTGGTCGGGACCCAAAGCGCCCAGCCCTC...GAGCTCAGGAGGCCGCCTGAGGACTGCACACCGGGCCCACACCTCTCCTGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647861.1
CDS-3UTR TCA 90 bp GGGGCAGGAGAGGTGTGGGCCCGGTGTGCAGTCCTCAGGCGGCCTCCTGAGCTCCATGTGCAGCATGTCTaGGGCCGTCGGGGATACCTG +
Preference number: 4 (lower is better)
Translates to: GAGEVWARCAVLRRPPELHVQHV*GRRGYL
Trigger: CAGGTATCCCCGACGGCCTCAGACATGCTGCACATG...GAGCTCAGGAGGCCGCCTGAGGACTGCACACCGGGCCCACACCTCTCCTGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR TCA 90 bp GGGGCAGGAGAGGTGTGGGCCCGGTGTGCAGTCCTCAGGCGGCCTCCTGAGCTCAGGCCAGGTAGGCAGTaGGCTCCCTCAAATCCTCCC +
Preference number: 4 (lower is better)
Translates to: GAGEVWARCAVLRRPPELRPGRQ*APSNPP
Trigger: GGGAGGATTTGAGGGAGCTCACTGCCTACCTGGCCT...GAGCTCAGGAGGCCGCCTGAGGACTGCACACCGGGCCCACACCTCTCCTGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR GCA 90 bp GGGGCAGGAGAGGTGTGGGCCCGGTGTGCAGTCCTCAGGCGGCCTCCTGAGCTCGACTTGGAGGAGGTGTaGCCCGTGTGGTCCAGTGTG +
Preference number: 4 (lower is better)
Translates to: GAGEVWARCAVLRRPPELDLEEV*PVWSSV
Trigger: CACACTGGACCACACGGGGCACACCTCCTCCAAGTC...GAGCTCAGGAGGCCGCCTGAGGACTGCACACCGGGCCCACACCTCTCCTGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR GCA 90 bp GGGGCAGGAGAGGTGTGGGCCCGGTGTGCAGTCCTCAGGCGGCCTCCTGAGCTCGCCAGCCAGGCCTTGTaGCTCCAGGATGGATGGTGT +
Preference number: 4 (lower is better)
Translates to: GAGEVWARCAVLRRPPELASQAL*LQDGWC
Trigger: ACACCATCCATCCTGGAGGCACAAGGCCTGGCTGGC...GAGCTCAGGAGGCCGCCTGAGGACTGCACACCGGGCCCACACCTCTCCTGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR GCA 90 bp GGGGCAGGAGAGGTGTGGGCCCGGTGTGCAGTCCTCAGGCGGCCTCCTGAGCTCGACACAGTTCTCAGATaGCCCCCGGGTGGAACCAGG +
Preference number: 4 (lower is better)
Translates to: GAGEVWARCAVLRRPPELDTVLR*PPGGTR
Trigger: CCTGGTTCCACCCGGGGGGCATCTGAGAACTGTGTC...GAGCTCAGGAGGCCGCCTGAGGACTGCACACCGGGCCCACACCTCTCCTGCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CCA 90 bp GGGGCAGGAGAGGTGTGGGCCCGGTGTGCAGTCCTCAGGCGGCCTCCTGAGCTCACACAAGCACCACCCTaGCTGGCCTGGGAAGTGCTG +
Preference number: 4 (lower is better)
Translates to: GAGEVWARCAVLRRPPELTQAPP*LAWEVL
Trigger: CAGCACTTCCCAGGCCAGCCAGGGTGGTGCTTGTGT...GAGCTCAGGAGGCCGCCTGAGGACTGCACACCGGGCCCACACCTCTCCTGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611814.4
CDS-3UTR TCA 90 bp GGGGCAGGAGAGGTGTGGGCCCGGTGTGCAGTCCTCAGGCGGCCTCCTGAGCTCAAGGAGGGCAGGCTGTaGGCTGCCAAAATGGAAGGG +
Preference number: 4 (lower is better)
Translates to: GAGEVWARCAVLRRPPELKEGRL*AAKMEG
Trigger: CCCTTCCATTTTGGCAGCTCACAGCCTGCCCTCCTT...GAGCTCAGGAGGCCGCCTGAGGACTGCACACCGGGCCCACACCTCTCCTGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR GCA 90 bp GGGGCAGGAGAGGTGTGGGCCCGGTGTGCAGTCCTCAGGCGGCCTCCTGAGCTCAGGTGGAGCCTCTGTTaGCATGGAGGGCGGGTCTTT +
Preference number: 4 (lower is better)
Translates to: GAGEVWARCAVLRRPPELRWSLC*HGGRVF
Trigger: AAAGACCCGCCCTCCATGGCAACAGAGGCTCCACCT...GAGCTCAGGAGGCCGCCTGAGGACTGCACACCGGGCCCACACCTCTCCTGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR GCA 90 bp GGGGCAGGAGAGGTGTGGGCCCGGTGTGCAGTCCTCAGGCGGCCTCCTGAGCTCGGGCAGGCTGTGAGCTaGCAAAATGGAAGGGACCTC +
Preference number: 4 (lower is better)
Translates to: GAGEVWARCAVLRRPPELGQAVS*QNGRDL
Trigger: GAGGTCCCTTCCATTTTGGCAGCTCACAGCCTGCCC...GAGCTCAGGAGGCCGCCTGAGGACTGCACACCGGGCCCACACCTCTCCTGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR GCA 90 bp GGGGCAGGAGAGGTGTGGGCCCGGTGTGCAGTCCTCAGGCGGCCTCCTGAGCTCTCCTTCCCTCGTCCCTaGCTCCCCCACTCAAAGAAC +
Preference number: 4 (lower is better)
Translates to: GAGEVWARCAVLRRPPELSFPRP*LPHSKN
Trigger: GTTCTTTGAGTGGGGGAGGCAGGGACGAGGGAAGGA...GAGCTCAGGAGGCCGCCTGAGGACTGCACACCGGGCCCACACCTCTCCTGCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CCA 90 bp GGGGCAGGAGAGGTGTGGGCCCGGTGTGCAGTCCTCAGGCGGCCTCCTGAGCTCAGTCGCCCGGAAGGATaGGGCCTCAGTTACCAGGTA +
Preference number: 4 (lower is better)
Translates to: GAGEVWARCAVLRRPPELSRPEG*GLSYQV
Trigger: TACCTGGTAACTGAGGCCCCATCCTTCCGGGCGACT...GAGCTCAGGAGGCCGCCTGAGGACTGCACACCGGGCCCACACCTCTCCTGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CCA 90 bp GGGGCAGGAGAGGTGTGGGCCCGGTGTGCAGTCCTCAGGCGGCCTCCTGAGCTCAATTGGGCAGGGACTTaGAGGAGGTGTGCCCCGTGT +
Preference number: 4 (lower is better)
Translates to: GAGEVWARCAVLRRPPELNWAGT*RRCAPC
Trigger: ACACGGGGCACACCTCCTCCAAGTCCCTGCCCAATT...GAGCTCAGGAGGCCGCCTGAGGACTGCACACCGGGCCCACACCTCTCCTGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR TCA 90 bp GGGGCAGGAGAGGTGTGGGCCCGGTGTGCAGTCCTCAGGCGGCCTCCTGAGCTCCTGGGCTGGAAAAACTaGGGCCAAGACCTCACTGGA +
Preference number: 4 (lower is better)
Translates to: GAGEVWARCAVLRRPPELLGWKN*GQDLTG
Trigger: TCCAGTGAGGTCTTGGCCTCAGTTTTTCCAGCCCAG...GAGCTCAGGAGGCCGCCTGAGGACTGCACACCGGGCCCACACCTCTCCTGCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR GCA 90 bp GGGGCAGGAGAGGTGTGGGCCCGGTGTGCAGTCCTCAGGCGGCCTCCTGAGCTCTCGTCCCATCTCATGTaGAGCATGTCTGAGGCCGTC +
Preference number: 4 (lower is better)
Translates to: GAGEVWARCAVLRRPPELSSHLM*SMSEAV
Trigger: GACGGCCTCAGACATGCTGCACATGAGATGGGACGA...GAGCTCAGGAGGCCGCCTGAGGACTGCACACCGGGCCCACACCTCTCCTGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CCA 90 bp GGGGCAGGAGAGGTGTGGGCCCGGTGTGCAGTCCTCAGGCGGCCTCCTGAGCTCCGATCCTCTCTGTCTTaGCCCATACCACCTGCGTGT +
Preference number: 4 (lower is better)
Translates to: GAGEVWARCAVLRRPPELRSSLS*PIPPAC
Trigger: ACACGCAGGTGGTATGGGCCAAGACAGAGAGGATCG...GAGCTCAGGAGGCCGCCTGAGGACTGCACACCGGGCCCACACCTCTCCTGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CCA 90 bp GGGGCAGGAGAGGTGTGGGCCCGGTGTGCAGTCCTCAGGCGGCCTCCTGAGCTCCTTCCGGGCTTCCGATaGGTTCACAGAGGGAGTTCT +
Preference number: 4 (lower is better)
Translates to: GAGEVWARCAVLRRPPELLPGFR*VHRGSS
Trigger: AGAACTCCCTCTGTGAACCCATCGGAAGCCCGGAAG...GAGCTCAGGAGGCCGCCTGAGGACTGCACACCGGGCCCACACCTCTCCTGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CCA 90 bp GGGGCAGGAGAGGTGTGGGCCCGGTGTGCAGTCCTCAGGCGGCCTCCTGAGCTCAAGGAAGTTGGGGCCTaGGTTTCCACAGCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: GAGEVWARCAVLRRPPELKEVGA*VSTAGR
Trigger: TCTGCCTGCTGTGGAAACCCAGGCCCCAACTTCCTT...GAGCTCAGGAGGCCGCCTGAGGACTGCACACCGGGCCCACACCTCTCCTGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CCA 90 bp GGGGCAGGAGAGGTGTGGGCCCGGTGTGCAGTCCTCAGGCGGCCTCCTGAGCTCTCACCTGGCTTGTCCTaGGCTGGAAAAACTGAGGCC +
Preference number: 4 (lower is better)
Translates to: GAGEVWARCAVLRRPPELSPGLS*AGKTEA
Trigger: GGCCTCAGTTTTTCCAGCCCAGGACAAGCCAGGTGA...GAGCTCAGGAGGCCGCCTGAGGACTGCACACCGGGCCCACACCTCTCCTGCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CCA 90 bp GGGGCAGGAGAGGTGTGGGCCCGGTGTGCAGTCCTCAGGCGGCCTCCTGAGCTCAGAACCCCACTCCAGTaGGGCTTGTCCTTCATCTGC +
Preference number: 4 (lower is better)
Translates to: GAGEVWARCAVLRRPPELRTPLQ*GLSFIC
Trigger: GCAGATGAAGGACAAGCCCCACTGGAGTGGGGTTCT...GAGCTCAGGAGGCCGCCTGAGGACTGCACACCGGGCCCACACCTCTCCTGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CCA 90 bp GGGGCAGGAGAGGTGTGGGCCCGGTGTGCAGTCCTCAGGCGGCCTCCTGAGCTCAGCTTCTCACAGAAGTaGGAACCACAGCCGATCCTC +
Preference number: 4 (lower is better)
Translates to: GAGEVWARCAVLRRPPELSFSQK*EPQPIL
Trigger: GAGGATCGGCTGTGGTTCCCACTTCTGTGAGAAGCT...GAGCTCAGGAGGCCGCCTGAGGACTGCACACCGGGCCCACACCTCTCCTGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CCA 90 bp GGGGCAGGAGAGGTGTGGGCCCGGTGTGCAGTCCTCAGGCGGCCTCCTGAGCTCGTCTCCTCAACACCCTaGAGCTTCTCACAGAAGTGG +
Preference number: 4 (lower is better)
Translates to: GAGEVWARCAVLRRPPELVSSTP*SFSQKW
Trigger: CCACTTCTGTGAGAAGCTCCAGGGTGTTGAGGAGAC...GAGCTCAGGAGGCCGCCTGAGGACTGCACACCGGGCCCACACCTCTCCTGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CCA 90 bp GGGGCAGGAGAGGTGTGGGCCCGGTGTGCAGTCCTCAGGCGGCCTCCTGAGCTCCTGTCAGGGACATCTTaGGGTCCAGAGAGTTCTCTG +
Preference number: 4 (lower is better)
Translates to: GAGEVWARCAVLRRPPELLSGTS*GPESSL
Trigger: CAGAGAACTCTCTGGACCCCAAGATGTCCCTGACAG...GAGCTCAGGAGGCCGCCTGAGGACTGCACACCGGGCCCACACCTCTCCTGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CCA 90 bp GGGGCAGGAGAGGTGTGGGCCCGGTGTGCAGTCCTCAGGCGGCCTCCTGAGCTCAGGTATTGGGGAAATTaGGCAGGGACTTGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: GAGEVWARCAVLRRPPELRYWGN*AGTWRR
Trigger: CCTCCTCCAAGTCCCTGCCCAATTTCCCCAATACCT...GAGCTCAGGAGGCCGCCTGAGGACTGCACACCGGGCCCACACCTCTCCTGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR TCA 90 bp GGGGCAGGAGAGGTGTGGGCCCGGTGTGCAGTCCTCAGGCGGCCTCCTGAGCTCGACCTCTTCACCCTTTaGGTGGTATCCCCTTCAGAA +
Preference number: 4 (lower is better)
Translates to: GAGEVWARCAVLRRPPELDLFTL*VVSPSE
Trigger: TTCTGAAGGGGATACCACTCAAAGGGTGAAGAGGTC...GAGCTCAGGAGGCCGCCTGAGGACTGCACACCGGGCCCACACCTCTCCTGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CCA 90 bp CCGGAGGGCCTTAACCAAGAAGTATCTTGTTTAGGGGCTGGGGACAGGGTGGGGGCCGTGCGTAGGCCTTaGCGAAGGCGGCCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: PEGLNQEVSCLGAGDRVGAVRRP*RRRPAP
Trigger: AGGAGCTGGCCGCCTTCGCCAAGGCCTACGCACGGC...CCCCACCCTGTCCCCAGCCCCTAAACAAGATACTTCTTGGTTAAGGCCCTCCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR GCA 90 bp CCGGAGGGCCTTAACCAAGAAGTATCTTGTTTAGGGGCTGGGGACAGGGTGGGGCCTGGCAAGGACGACTaGAGAGCCAGGGCACGCCCA +
Preference number: 4 (lower is better)
Translates to: PEGLNQEVSCLGAGDRVGPGKDD*RARARP
Trigger: TGGGCGTGCCCTGGCTCTGCAGTCGTCCTTGCCAGG...CCCCACCCTGTCCCCAGCCCCTAAACAAGATACTTCTTGGTTAAGGCCCTCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR GCA 90 bp CTTCCGGAGGGCCTTAACCAAGAAGTATCTTGTTTAGGGGCTGGGGACAGGGTGGGTGTGGGCCCGGTGTaGAGTCCTCAGGCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: LPEGLNQEVSCLGAGDRVGVGPV*SPQAAS
Trigger: GGAGGCCGCCTGAGGACTGCACACCGGGCCCACACC...CACCCTGTCCCCAGCCCCTAAACAAGATACTTCTTGGTTAAGGCCCTCCGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR GCA 90 bp ATGAGGCACATGCCCCGTAGCCTTTCCCTTCCGGAGGGCCTTAACCAAGAAGTAGGTGTGGGCCCGGTGTaGAGTCCTCAGGCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: MRHMPRSLSLPEGLNQEVGVGPV*SPQAAS
Trigger: GGAGGCCGCCTGAGGACTGCACACCGGGCCCACACC...TACTTCTTGGTTAAGGCCCTCCGGAAGGGAAAGGCTACGGGGCATGTGCCTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CCA 90 bp CCGGAGGGCCTTAACCAAGAAGTATCTTGTTTAGGGGCTGGGGACAGGGTGGGGCCGCGCTCCTTGTTGTaGCCCCACACGCACTGCCGT +
Preference number: 4 (lower is better)
Translates to: PEGLNQEVSCLGAGDRVGPRSLL*PHTHCR
Trigger: ACGGCAGTGCGTGTGGGGCCACAACAAGGAGCGCGG...CCCCACCCTGTCCCCAGCCCCTAAACAAGATACTTCTTGGTTAAGGCCCTCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CCA 90 bp GGGGCAGGAGAGGTGTGGGCCCGGTGTGCAGTCCTCAGGCGGCCTCCTGAGCTCCCAGTAATTCGATGTTaGTCTCCTCAACACCCTGGA +
Preference number: 4 (lower is better)
Translates to: GAGEVWARCAVLRRPPELPVIRC*SPQHPG
Trigger: TCCAGGGTGTTGAGGAGACCAACATCGAATTACTGG...GAGCTCAGGAGGCCGCCTGAGGACTGCACACCGGGCCCACACCTCTCCTGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR TCA 90 bp CCGGAGGGCCTTAACCAAGAAGTATCTTGTTTAGGGGCTGGGGACAGGGTGGGGGCCCGAGTTCAGCCCTaGCACGACGCTAGGCTTGTC +
Preference number: 4 (lower is better)
Translates to: PEGLNQEVSCLGAGDRVGARVQP*HDARLV
Trigger: GACAAGCCTAGCGTCGTGTCAGGGCTGAACTCGGGC...CCCCACCCTGTCCCCAGCCCCTAAACAAGATACTTCTTGGTTAAGGCCCTCCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR GCA 90 bp CCGGAGGGCCTTAACCAAGAAGTATCTTGTTTAGGGGCTGGGGACAGGGTGGGGCAGGGAGAGCGCACATaGTGTGTGGGCAGACAGCCC +
Preference number: 4 (lower is better)
Translates to: PEGLNQEVSCLGAGDRVGQGERT*CVGRQP
Trigger: GGGCTGTCTGCCCACACAGCATGTGCGCTCTCCCTG...CCCCACCCTGTCCCCAGCCCCTAAACAAGATACTTCTTGGTTAAGGCCCTCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CCA 90 bp CCGGAGGGCCTTAACCAAGAAGTATCTTGTTTAGGGGCTGGGGACAGGGTGGGGTGCAGGAGCCGTGCATaGTGGCCAGCCGTCTCTCCT +
Preference number: 4 (lower is better)
Translates to: PEGLNQEVSCLGAGDRVGCRSRA*WPAVSP
Trigger: AGGAGAGACGGCTGGCCACCATGCACGGCTCCTGCA...CCCCACCCTGTCCCCAGCCCCTAAACAAGATACTTCTTGGTTAAGGCCCTCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CCA 90 bp CCGGAGGGCCTTAACCAAGAAGTATCTTGTTTAGGGGCTGGGGACAGGGTGGGGCTCCAACGGGGCCTGTaGTGGCCACCAGCAGTAGCA +
Preference number: 4 (lower is better)
Translates to: PEGLNQEVSCLGAGDRVGLQRGL*WPPAVA
Trigger: TGCTACTGCTGGTGGCCACCACAGGCCCCGTTGGAG...CCCCACCCTGTCCCCAGCCCCTAAACAAGATACTTCTTGGTTAAGGCCCTCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CCA 90 bp CTTCCGGAGGGCCTTAACCAAGAAGTATCTTGTTTAGGGGCTGGGGACAGGGTGGCCGTGCGTAGGCCTTaGCGAAGGCGGCCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: LPEGLNQEVSCLGAGDRVAVRRP*RRRPAP
Trigger: AGGAGCTGGCCGCCTTCGCCAAGGCCTACGCACGGC...CACCCTGTCCCCAGCCCCTAAACAAGATACTTCTTGGTTAAGGCCCTCCGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CCA 90 bp GGGGCAGGAGAGGTGTGGGCCCGGTGTGCAGTCCTCAGGCGGCCTCCTGAGCTCTGTGAGCTGCCAAAATaGAAGGGACCTCAGTTGTTA +
Preference number: 4 (lower is better)
Translates to: GAGEVWARCAVLRRPPELCELPK*KGPQLL
Trigger: TAACAACTGAGGTCCCTTCCATTTTGGCAGCTCACA...GAGCTCAGGAGGCCGCCTGAGGACTGCACACCGGGCCCACACCTCTCCTGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR GCA 90 bp CTTCCGGAGGGCCTTAACCAAGAAGTATCTTGTTTAGGGGCTGGGGACAGGGTGCCACACGCACTGCCGTaGGTAGGCCTTGGCGAAGGC +
Preference number: 4 (lower is better)
Translates to: LPEGLNQEVSCLGAGDRVPHALP*VGLGEG
Trigger: GCCTTCGCCAAGGCCTACGCACGGCAGTGCGTGTGG...CACCCTGTCCCCAGCCCCTAAACAAGATACTTCTTGGTTAAGGCCCTCCGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR GCA 90 bp CCGGAGGGCCTTAACCAAGAAGTATCTTGTTTAGGGGCTGGGGACAGGGTGGGGTGGTCCAGTGTGGCCTaGAGCTCACCTGGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: PEGLNQEVSCLGAGDRVGWSSVA*SSPGLS
Trigger: GGACAAGCCAGGTGAGCTGCAGGCCACACTGGACCA...CCCCACCCTGTCCCCAGCCCCTAAACAAGATACTTCTTGGTTAAGGCCCTCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR GCA 90 bp CCGGAGGGCCTTAACCAAGAAGTATCTTGTTTAGGGGCTGGGGACAGGGTGGGGGACTTGGAGGAGGTGTaGCCCGTGTGGTCCAGTGTG +
Preference number: 4 (lower is better)
Translates to: PEGLNQEVSCLGAGDRVGDLEEV*PVWSSV
Trigger: CACACTGGACCACACGGGGCACACCTCCTCCAAGTC...CCCCACCCTGTCCCCAGCCCCTAAACAAGATACTTCTTGGTTAAGGCCCTCCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR GCA 90 bp ATGAGGCACATGCCCCGTAGCCTTTCCCTTCCGGAGGGCCTTAACCAAGAAGTACCTGGCAAGGACGACTaGAGAGCCAGGGCACGCCCA +
Preference number: 4 (lower is better)
Translates to: MRHMPRSLSLPEGLNQEVPGKDD*RARARP
Trigger: TGGGCGTGCCCTGGCTCTGCAGTCGTCCTTGCCAGG...TACTTCTTGGTTAAGGCCCTCCGGAAGGGAAAGGCTACGGGGCATGTGCCTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR GCA 90 bp CTTCCGGAGGGCCTTAACCAAGAAGTATCTTGTTTAGGGGCTGGGGACAGGGTGCCTGGCAAGGACGACTaGAGAGCCAGGGCACGCCCA +
Preference number: 4 (lower is better)
Translates to: LPEGLNQEVSCLGAGDRVPGKDD*RARARP
Trigger: TGGGCGTGCCCTGGCTCTGCAGTCGTCCTTGCCAGG...CACCCTGTCCCCAGCCCCTAAACAAGATACTTCTTGGTTAAGGCCCTCCGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR GCA 90 bp CCGGAGGGCCTTAACCAAGAAGTATCTTGTTTAGGGGCTGGGGACAGGGTGGGGGCCAGCCAGGCCTTGTaGCTCCAGGATGGATGGTGT +
Preference number: 4 (lower is better)
Translates to: PEGLNQEVSCLGAGDRVGASQAL*LQDGWC
Trigger: ACACCATCCATCCTGGAGGCACAAGGCCTGGCTGGC...CCCCACCCTGTCCCCAGCCCCTAAACAAGATACTTCTTGGTTAAGGCCCTCCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CCA 90 bp ATGAGGCACATGCCCCGTAGCCTTTCCCTTCCGGAGGGCCTTAACCAAGAAGTACCGCGCTCCTTGTTGTaGCCCCACACGCACTGCCGT +
Preference number: 4 (lower is better)
Translates to: MRHMPRSLSLPEGLNQEVPRSLL*PHTHCR
Trigger: ACGGCAGTGCGTGTGGGGCCACAACAAGGAGCGCGG...TACTTCTTGGTTAAGGCCCTCCGGAAGGGAAAGGCTACGGGGCATGTGCCTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CCA 90 bp ATGAGGCACATGCCCCGTAGCCTTTCCCTTCCGGAGGGCCTTAACCAAGAAGTAGGTGCCACTCCTCCATaGCCAGCGGCACGTCCATGC +
Preference number: 4 (lower is better)
Translates to: MRHMPRSLSLPEGLNQEVGATPP*PAARPC
Trigger: GCATGGACGTGCCGCTGGCCATGGAGGAGTGGCACC...TACTTCTTGGTTAAGGCCCTCCGGAAGGGAAAGGCTACGGGGCATGTGCCTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CCA 90 bp ATGAGGCACATGCCCCGTAGCCTTTCCCTTCCGGAGGGCCTTAACCAAGAAGTAGAGGTGTGCCCCGTGTaGTCCAGTGTGGCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: MRHMPRSLSLPEGLNQEVEVCPV*SSVACS
Trigger: GCTGCAGGCCACACTGGACCACACGGGGCACACCTC...TACTTCTTGGTTAAGGCCCTCCGGAAGGGAAAGGCTACGGGGCATGTGCCTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CCA 90 bp ATGAGGCACATGCCCCGTAGCCTTTCCCTTCCGGAGGGCCTTAACCAAGAAGTATGTCTCAGGGAGGGCTaGGCGCTTTGGGTCCCGACC +
Preference number: 4 (lower is better)
Translates to: MRHMPRSLSLPEGLNQEVCLREG*ALWVPT
Trigger: GGTCGGGACCCAAAGCGCCCAGCCCTCCCTGAGACA...TACTTCTTGGTTAAGGCCCTCCGGAAGGGAAAGGCTACGGGGCATGTGCCTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647861.1
CDS-3UTR CCA 90 bp ATGAGGCACATGCCCCGTAGCCTTTCCCTTCCGGAGGGCCTTAACCAAGAAGTAACACAAGCACCACCCTaGCTGGGGTGGGGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: MRHMPRSLSLPEGLNQEVTQAPP*LGWGSG
Trigger: CCCACTGCCCCACCCCAGCCAGGGTGGTGCTTGTGT...TACTTCTTGGTTAAGGCCCTCCGGAAGGGAAAGGCTACGGGGCATGTGCCTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000647861.1
CDS-3UTR TCA 90 bp CTTCCGGAGGGCCTTAACCAAGAAGTATCTTGTTTAGGGGCTGGGGACAGGGTGTGCAGGTGGCGGCGCTaGGGTTGTAGTGCTCACGCT +
Preference number: 4 (lower is better)
Translates to: LPEGLNQEVSCLGAGDRVCRWRR*GCSAHA
Trigger: AGCGTGAGCACTACAACCTCAGCGCCGCCACCTGCA...CACCCTGTCCCCAGCCCCTAAACAAGATACTTCTTGGTTAAGGCCCTCCGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR TCA 90 bp CCGGAGGGCCTTAACCAAGAAGTATCTTGTTTAGGGGCTGGGGACAGGGTGGGGAAGGAGGGCAGGCTGTaGGCTGCCAAAATGGAAGGG +
Preference number: 4 (lower is better)
Translates to: PEGLNQEVSCLGAGDRVGKEGRL*AAKMEG
Trigger: CCCTTCCATTTTGGCAGCTCACAGCCTGCCCTCCTT...CCCCACCCTGTCCCCAGCCCCTAAACAAGATACTTCTTGGTTAAGGCCCTCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR TCA 90 bp CTTCCGGAGGGCCTTAACCAAGAAGTATCTTGTTTAGGGGCTGGGGACAGGGTGGCCCGAGTTCAGCCCTaGCACGACGCTAGGCTTGTC +
Preference number: 4 (lower is better)
Translates to: LPEGLNQEVSCLGAGDRVARVQP*HDARLV
Trigger: GACAAGCCTAGCGTCGTGTCAGGGCTGAACTCGGGC...CACCCTGTCCCCAGCCCCTAAACAAGATACTTCTTGGTTAAGGCCCTCCGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CCA 90 bp ATGAGGCACATGCCCCGTAGCCTTTCCCTTCCGGAGGGCCTTAACCAAGAAGTATGCAGGAGCCGTGCATaGTGGCCAGCCGTCTCTCCT +
Preference number: 4 (lower is better)
Translates to: MRHMPRSLSLPEGLNQEVCRSRA*WPAVSP
Trigger: AGGAGAGACGGCTGGCCACCATGCACGGCTCCTGCA...TACTTCTTGGTTAAGGCCCTCCGGAAGGGAAAGGCTACGGGGCATGTGCCTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CCA 90 bp ATGAGGCACATGCCCCGTAGCCTTTCCCTTCCGGAGGGCCTTAACCAAGAAGTACTCCAACGGGGCCTGTaGTGGCCACCAGCAGTAGCA +
Preference number: 4 (lower is better)
Translates to: MRHMPRSLSLPEGLNQEVLQRGL*WPPAVA
Trigger: TGCTACTGCTGGTGGCCACCACAGGCCCCGTTGGAG...TACTTCTTGGTTAAGGCCCTCCGGAAGGGAAAGGCTACGGGGCATGTGCCTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CCA 90 bp ATGAGGCACATGCCCCGTAGCCTTTCCCTTCCGGAGGGCCTTAACCAAGAAGTAGCCTCCTCCTGGGCATaGGGTAGGAGTTCCCTTGCC +
Preference number: 4 (lower is better)
Translates to: MRHMPRSLSLPEGLNQEVASSWA*GRSSLA
Trigger: GGCAAGGGAACTCCTACCCCATGCCCAGGAGGAGGC...TACTTCTTGGTTAAGGCCCTCCGGAAGGGAAAGGCTACGGGGCATGTGCCTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CCA 90 bp CTTCCGGAGGGCCTTAACCAAGAAGTATCTTGTTTAGGGGCTGGGGACAGGGTGGCCTCAGCCTCCTCCTaGGCATGGGGTAGGAGTTCC +
Preference number: 4 (lower is better)
Translates to: LPEGLNQEVSCLGAGDRVASASS*AWGRSS
Trigger: GGAACTCCTACCCCATGCCCAGGAGGAGGCTGAGGC...CACCCTGTCCCCAGCCCCTAAACAAGATACTTCTTGGTTAAGGCCCTCCGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CCA 90 bp ATGAGGCACATGCCCCGTAGCCTTTCCCTTCCGGAGGGCCTTAACCAAGAAGTAGCCTCAGCCTCCTCCTaGGCATGGGGTAGGAGTTCC +
Preference number: 4 (lower is better)
Translates to: MRHMPRSLSLPEGLNQEVASASS*AWGRSS
Trigger: GGAACTCCTACCCCATGCCCAGGAGGAGGCTGAGGC...TACTTCTTGGTTAAGGCCCTCCGGAAGGGAAAGGCTACGGGGCATGTGCCTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CCA 90 bp CTTCCGGAGGGCCTTAACCAAGAAGTATCTTGTTTAGGGGCTGGGGACAGGGTGAGGGCCCTCTGCACCTaGCAAGGACGACTGCAGAGC +
Preference number: 4 (lower is better)
Translates to: LPEGLNQEVSCLGAGDRVRALCT*QGRLQS
Trigger: GCTCTGCAGTCGTCCTTGCCAGGTGCAGAGGGCCCT...CACCCTGTCCCCAGCCCCTAAACAAGATACTTCTTGGTTAAGGCCCTCCGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CCA 90 bp CCGGAGGGCCTTAACCAAGAAGTATCTTGTTTAGGGGCTGGGGACAGGGTGGGGCAGGTTGCCCTGGTGTaGTCATCTCTGTGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: PEGLNQEVSCLGAGDRVGQVALV*SSLWPL
Trigger: CAGAGGCCACAGAGATGACCACACCAGGGCAACCTG...CCCCACCCTGTCCCCAGCCCCTAAACAAGATACTTCTTGGTTAAGGCCCTCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000611814.4
ENST00000647861.1
CDS-3UTR TCA 90 bp ATGAGGCACATGCCCCGTAGCCTTTCCCTTCCGGAGGGCCTTAACCAAGAAGTAGTTTCTCCTCATCTGTaGGGGCTCCAACGGGGCCTG +
Preference number: 4 (lower is better)
Translates to: MRHMPRSLSLPEGLNQEVVSPHL*GLQRGL
Trigger: CAGGCCCCGTTGGAGCCCTCACAGATGAGGAGAAAC...TACTTCTTGGTTAAGGCCCTCCGGAAGGGAAAGGCTACGGGGCATGTGCCTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR TCA 90 bp GGGGCAGGAGAGGTGTGGGCCCGGTGTGCAGTCCTCAGGCGGCCTCCTGAGCTCATTAGGGAAATACAGTaGAATACCACTTCACACTCA +
Preference number: 4 (lower is better)
Translates to: GAGEVWARCAVLRRPPELIREIQ*NTTSHS
Trigger: TGAGTGTGAAGTGGTATTTCACTGTATTTCCCTAAT...GAGCTCAGGAGGCCGCCTGAGGACTGCACACCGGGCCCACACCTCTCCTGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647861.1
CDS-3UTR GCA 90 bp CTTCCGGAGGGCCTTAACCAAGAAGTATCTTGTTTAGGGGCTGGGGACAGGGTGTGGTCCAGTGTGGCCTaGAGCTCACCTGGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: LPEGLNQEVSCLGAGDRVWSSVA*SSPGLS
Trigger: GGACAAGCCAGGTGAGCTGCAGGCCACACTGGACCA...CACCCTGTCCCCAGCCCCTAAACAAGATACTTCTTGGTTAAGGCCCTCCGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR GCA 90 bp ATGAGGCACATGCCCCGTAGCCTTTCCCTTCCGGAGGGCCTTAACCAAGAAGTAGACTTGGAGGAGGTGTaGCCCGTGTGGTCCAGTGTG +
Preference number: 4 (lower is better)
Translates to: MRHMPRSLSLPEGLNQEVDLEEV*PVWSSV
Trigger: CACACTGGACCACACGGGGCACACCTCCTCCAAGTC...TACTTCTTGGTTAAGGCCCTCCGGAAGGGAAAGGCTACGGGGCATGTGCCTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR GCA 90 bp ATGAGGCACATGCCCCGTAGCCTTTCCCTTCCGGAGGGCCTTAACCAAGAAGTAGACACAGTTCTCAGATaGCCCCCGGGTGGAACCAGG +
Preference number: 4 (lower is better)
Translates to: MRHMPRSLSLPEGLNQEVDTVLR*PPGGTR
Trigger: CCTGGTTCCACCCGGGGGGCATCTGAGAACTGTGTC...TACTTCTTGGTTAAGGCCCTCCGGAAGGGAAAGGCTACGGGGCATGTGCCTCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CCA 90 bp CCGGAGGGCCTTAACCAAGAAGTATCTTGTTTAGGGGCTGGGGACAGGGTGGGGCGATCCTCTCTGTCTTaGCCCATACCACCTGCGTGT +
Preference number: 4 (lower is better)
Translates to: PEGLNQEVSCLGAGDRVGRSSLS*PIPPAC
Trigger: ACACGCAGGTGGTATGGGCCAAGACAGAGAGGATCG...CCCCACCCTGTCCCCAGCCCCTAAACAAGATACTTCTTGGTTAAGGCCCTCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CCA 90 bp CCGGAGGGCCTTAACCAAGAAGTATCTTGTTTAGGGGCTGGGGACAGGGTGGGGAGGCCAAGACCTCACTaGAAGGAGGCAACTCAGCCT +
Preference number: 4 (lower is better)
Translates to: PEGLNQEVSCLGAGDRVGRPRPH*KEATQP
Trigger: AGGCTGAGTTGCCTCCTTCCAGTGAGGTCTTGGCCT...CCCCACCCTGTCCCCAGCCCCTAAACAAGATACTTCTTGGTTAAGGCCCTCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CCA 90 bp CTTCCGGAGGGCCTTAACCAAGAAGTATCTTGTTTAGGGGCTGGGGACAGGGTGGGTGGAACCAGGCACTaGCACTACAGGTTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: LPEGLNQEVSCLGAGDRVGGTRH*HYRLPW
Trigger: CCAGGGCAACCTGTAGTGCCAGTGCCTGGTTCCACC...CACCCTGTCCCCAGCCCCTAAACAAGATACTTCTTGGTTAAGGCCCTCCGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CCA 90 bp CCGGAGGGCCTTAACCAAGAAGTATCTTGTTTAGGGGCTGGGGACAGGGTGGGGTTAGGATGGCTGGCCTaGGAAGTGCTGGACTCAGGA +
Preference number: 4 (lower is better)
Translates to: PEGLNQEVSCLGAGDRVGLGWLA*EVLDSG
Trigger: TCCTGAGTCCAGCACTTCCCAGGCCAGCCATCCTAA...CCCCACCCTGTCCCCAGCCCCTAAACAAGATACTTCTTGGTTAAGGCCCTCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000647861.1
CDS-3UTR TCA 90 bp ATGAGGCACATGCCCCGTAGCCTTTCCCTTCCGGAGGGCCTTAACCAAGAAGTACCATGCCCTCGTCTGTaGTGGCGAACAGATTCTCGC +
Preference number: 4 (lower is better)
Translates to: MRHMPRSLSLPEGLNQEVPCPRL*WRTDSR
Trigger: GCGAGAATCTGTTCGCCATCACAGACGAGGGCATGG...TACTTCTTGGTTAAGGCCCTCCGGAAGGGAAAGGCTACGGGGCATGTGCCTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR GCA 90 bp ATGCCCCGTAGCCTTTCCCTTCCGGAGGGCCTTAACCAAGAAGTATCTTGTTTACCACACGCACTGCCGTaGGTAGGCCTTGGCGAAGGC +
Preference number: 4 (lower is better)
Translates to: MPRSLSLPEGLNQEVSCLPHALP*VGLGEG
Trigger: GCCTTCGCCAAGGCCTACGCACGGCAGTGCGTGTGG...TAAACAAGATACTTCTTGGTTAAGGCCCTCCGGAAGGGAAAGGCTACGGGGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR GCA 90 bp CTTCCGGAGGGCCTTAACCAAGAAGTATCTTGTTTAGGGGCTGGGGACAGGGTGAGGTGGAGCCTCTGTTaGCATGGAGGGCGGGTCTTT +
Preference number: 4 (lower is better)
Translates to: LPEGLNQEVSCLGAGDRVRWSLC*HGGRVF
Trigger: AAAGACCCGCCCTCCATGGCAACAGAGGCTCCACCT...CACCCTGTCCCCAGCCCCTAAACAAGATACTTCTTGGTTAAGGCCCTCCGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR GCA 90 bp ATGAGGCACATGCCCCGTAGCCTTTCCCTTCCGGAGGGCCTTAACCAAGAAGTAGGGCAGGCTGTGAGCTaGCAAAATGGAAGGGACCTC +
Preference number: 4 (lower is better)
Translates to: MRHMPRSLSLPEGLNQEVGQAVS*QNGRDL
Trigger: GAGGTCCCTTCCATTTTGGCAGCTCACAGCCTGCCC...TACTTCTTGGTTAAGGCCCTCCGGAAGGGAAAGGCTACGGGGCATGTGCCTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR GCA 90 bp ATGAGGCACATGCCCCGTAGCCTTTCCCTTCCGGAGGGCCTTAACCAAGAAGTATCCTTCCCTCGTCCCTaGCTCCCCCACTCAAAGAAC +
Preference number: 4 (lower is better)
Translates to: MRHMPRSLSLPEGLNQEVSFPRP*LPHSKN
Trigger: GTTCTTTGAGTGGGGGAGGCAGGGACGAGGGAAGGA...TACTTCTTGGTTAAGGCCCTCCGGAAGGGAAAGGCTACGGGGCATGTGCCTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR GCA 90 bp CTTCCGGAGGGCCTTAACCAAGAAGTATCTTGTTTAGGGGCTGGGGACAGGGTGTCCTTCCCTCGTCCCTaGCTCCCCCACTCAAAGAAC +
Preference number: 4 (lower is better)
Translates to: LPEGLNQEVSCLGAGDRVSFPRP*LPHSKN
Trigger: GTTCTTTGAGTGGGGGAGGCAGGGACGAGGGAAGGA...CACCCTGTCCCCAGCCCCTAAACAAGATACTTCTTGGTTAAGGCCCTCCGGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR GCA 90 bp ATGAGGCACATGCCCCGTAGCCTTTCCCTTCCGGAGGGCCTTAACCAAGAAGTACATCTCTGTGGCCTCTaGCTCCAGTCATGCCCCTTC +
Preference number: 4 (lower is better)
Translates to: MRHMPRSLSLPEGLNQEVHLCGL*LQSCPF
Trigger: GAAGGGGCATGACTGGAGGCAGAGGCCACAGAGATG...TACTTCTTGGTTAAGGCCCTCCGGAAGGGAAAGGCTACGGGGCATGTGCCTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611814.4
ENST00000647861.1
CDS-3UTR GCA 90 bp CCGGAGGGCCTTAACCAAGAAGTATCTTGTTTAGGGGCTGGGGACAGGGTGGGGACTGGCACTACAGGTTaGCCTGGTGTGGTCATCTCT +
Preference number: 4 (lower is better)
Translates to: PEGLNQEVSCLGAGDRVGTGTTG*PGVVIS
Trigger: AGAGATGACCACACCAGGGCAACCTGTAGTGCCAGT...CCCCACCCTGTCCCCAGCCCCTAAACAAGATACTTCTTGGTTAAGGCCCTCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CCA 90 bp ATGCCCCGTAGCCTTTCCCTTCCGGAGGGCCTTAACCAAGAAGTATCTTGTTTAGGTGCCACTCCTCCATaGCCAGCGGCACGTCCATGC +
Preference number: 4 (lower is better)
Translates to: MPRSLSLPEGLNQEVSCLGATPP*PAARPC
Trigger: GCATGGACGTGCCGCTGGCCATGGAGGAGTGGCACC...TAAACAAGATACTTCTTGGTTAAGGCCCTCCGGAAGGGAAAGGCTACGGGGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CCA 90 bp CCGGAGGGCCTTAACCAAGAAGTATCTTGTTTAGGGGCTGGGGACAGGGTGGGGAGCTTCTCACAGAAGTaGGAACCACAGCCGATCCTC +
Preference number: 4 (lower is better)
Translates to: PEGLNQEVSCLGAGDRVGSFSQK*EPQPIL
Trigger: GAGGATCGGCTGTGGTTCCCACTTCTGTGAGAAGCT...CCCCACCCTGTCCCCAGCCCCTAAACAAGATACTTCTTGGTTAAGGCCCTCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CCA 90 bp ATGAGGCACATGCCCCGTAGCCTTTCCCTTCCGGAGGGCCTTAACCAAGAAGTAAGTCGCCCGGAAGGATaGGGCCTCAGTTACCAGGTA +
Preference number: 4 (lower is better)
Translates to: MRHMPRSLSLPEGLNQEVSRPEG*GLSYQV
Trigger: TACCTGGTAACTGAGGCCCCATCCTTCCGGGCGACT...TACTTCTTGGTTAAGGCCCTCCGGAAGGGAAAGGCTACGGGGCATGTGCCTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CCA 90 bp CTTCCGGAGGGCCTTAACCAAGAAGTATCTTGTTTAGGGGCTGGGGACAGGGTGGAGCCTCTGTTGCCATaGAGGGCGGGTCTTTCGTTG +
Preference number: 4 (lower is better)
Translates to: LPEGLNQEVSCLGAGDRVEPLLP*RAGLSL
Trigger: CAACGAAAGACCCGCCCTCCATGGCAACAGAGGCTC...CACCCTGTCCCCAGCCCCTAAACAAGATACTTCTTGGTTAAGGCCCTCCGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CCA 90 bp CCGGAGGGCCTTAACCAAGAAGTATCTTGTTTAGGGGCTGGGGACAGGGTGGGGTTTGGGGAAGGTAACTaGCTCCTCATCCAAGGAGGG +
Preference number: 4 (lower is better)
Translates to: PEGLNQEVSCLGAGDRVGFGEGN*LLIQGG
Trigger: CCCTCCTTGGATGAGGAGCCAGTTACCTTCCCCAAA...CCCCACCCTGTCCCCAGCCCCTAAACAAGATACTTCTTGGTTAAGGCCCTCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CCA 90 bp CCGGAGGGCCTTAACCAAGAAGTATCTTGTTTAGGGGCTGGGGACAGGGTGGGGGTCCAGAGAGTTCTCTaGGCTCCTAGAGGGCACTTT +
Preference number: 4 (lower is better)
Translates to: PEGLNQEVSCLGAGDRVGVQRVL*APRGHF
Trigger: AAAGTGCCCTCTAGGAGCCCAGAGAACTCTCTGGAC...CCCCACCCTGTCCCCAGCCCCTAAACAAGATACTTCTTGGTTAAGGCCCTCCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CCA 90 bp CTTCCGGAGGGCCTTAACCAAGAAGTATCTTGTTTAGGGGCTGGGGACAGGGTGAATTGGGCAGGGACTTaGAGGAGGTGTGCCCCGTGT +
Preference number: 4 (lower is better)
Translates to: LPEGLNQEVSCLGAGDRVNWAGT*RRCAPC
Trigger: ACACGGGGCACACCTCCTCCAAGTCCCTGCCCAATT...CACCCTGTCCCCAGCCCCTAAACAAGATACTTCTTGGTTAAGGCCCTCCGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CCA 90 bp CCGGAGGGCCTTAACCAAGAAGTATCTTGTTTAGGGGCTGGGGACAGGGTGGGGAGGTATTGGGGAAATTaGGCAGGGACTTGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: PEGLNQEVSCLGAGDRVGRYWGN*AGTWRR
Trigger: CCTCCTCCAAGTCCCTGCCCAATTTCCCCAATACCT...CCCCACCCTGTCCCCAGCCCCTAAACAAGATACTTCTTGGTTAAGGCCCTCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR TCA 90 bp ATGCCCCGTAGCCTTTCCCTTCCGGAGGGCCTTAACCAAGAAGTATCTTGTTTATGCAGGTGGCGGCGCTaGGGTTGTAGTGCTCACGCT +
Preference number: 4 (lower is better)
Translates to: MPRSLSLPEGLNQEVSCLCRWRR*GCSAHA
Trigger: AGCGTGAGCACTACAACCTCAGCGCCGCCACCTGCA...TAAACAAGATACTTCTTGGTTAAGGCCCTCCGGAAGGGAAAGGCTACGGGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR TCA 90 bp ATGAGGCACATGCCCCGTAGCCTTTCCCTTCCGGAGGGCCTTAACCAAGAAGTAGGTTGCCAGGGAGCCTaGGACCTCTGTTACCAAGAA +
Preference number: 4 (lower is better)
Translates to: MRHMPRSLSLPEGLNQEVGCQGA*DLCYQE
Trigger: TTCTTGGTAACAGAGGTCTCAGGCTCCCTGGCAACC...TACTTCTTGGTTAAGGCCCTCCGGAAGGGAAAGGCTACGGGGCATGTGCCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR TCA 90 bp ATGAGGCACATGCCCCGTAGCCTTTCCCTTCCGGAGGGCCTTAACCAAGAAGTACTGGGCTGGAAAAACTaGGGCCAAGACCTCACTGGA +
Preference number: 4 (lower is better)
Translates to: MRHMPRSLSLPEGLNQEVLGWKN*GQDLTG
Trigger: TCCAGTGAGGTCTTGGCCTCAGTTTTTCCAGCCCAG...TACTTCTTGGTTAAGGCCCTCCGGAAGGGAAAGGCTACGGGGCATGTGCCTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR GCA 90 bp ATGCCCCGTAGCCTTTCCCTTCCGGAGGGCCTTAACCAAGAAGTATCTTGTTTATGCTCACGCTCGTGGTaGCACTCCTCCATGGCCAGC +
Preference number: 4 (lower is better)
Translates to: MPRSLSLPEGLNQEVSCLCSRSW*HSSMAS
Trigger: GCTGGCCATGGAGGAGTGGCACCACGAGCGTGAGCA...TAAACAAGATACTTCTTGGTTAAGGCCCTCCGGAAGGGAAAGGCTACGGGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR GCA 90 bp ATGAGGCACATGCCCCGTAGCCTTTCCCTTCCGGAGGGCCTTAACCAAGAAGTACACAGAGGGAGTTCTTaGAGTGGTAGCCAGAGGGAC +
Preference number: 4 (lower is better)
Translates to: MRHMPRSLSLPEGLNQEVHRGSS*SGSQRD
Trigger: GTCCCTCTGGCTACCACTGCAAGAACTCCCTCTGTG...TACTTCTTGGTTAAGGCCCTCCGGAAGGGAAAGGCTACGGGGCATGTGCCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR GCA 90 bp CTTCCGGAGGGCCTTAACCAAGAAGTATCTTGTTTAGGGGCTGGGGACAGGGTGCACAGAGGGAGTTCTTaGAGTGGTAGCCAGAGGGAC +
Preference number: 4 (lower is better)
Translates to: LPEGLNQEVSCLGAGDRVHRGSS*SGSQRD
Trigger: GTCCCTCTGGCTACCACTGCAAGAACTCCCTCTGTG...CACCCTGTCCCCAGCCCCTAAACAAGATACTTCTTGGTTAAGGCCCTCCGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR GCA 90 bp ATGAGGCACATGCCCCGTAGCCTTTCCCTTCCGGAGGGCCTTAACCAAGAAGTACCGACCAGCATCAAGTaGACTCCCCTTGGAGTCCTT +
Preference number: 4 (lower is better)
Translates to: MRHMPRSLSLPEGLNQEVPTSIK*TPLGVL
Trigger: AAGGACTCCAAGGGGAGTGCACTTGATGCTGGTCGG...TACTTCTTGGTTAAGGCCCTCCGGAAGGGAAAGGCTACGGGGCATGTGCCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647861.1
CDS-3UTR CCA 90 bp CTTCCGGAGGGCCTTAACCAAGAAGTATCTTGTTTAGGGGCTGGGGACAGGGTGAAGGAAGTTGGGGCCTaGGTTTCCACAGCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: LPEGLNQEVSCLGAGDRVKEVGA*VSTAGR
Trigger: TCTGCCTGCTGTGGAAACCCAGGCCCCAACTTCCTT...CACCCTGTCCCCAGCCCCTAAACAAGATACTTCTTGGTTAAGGCCCTCCGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CCA 90 bp CCGGAGGGCCTTAACCAAGAAGTATCTTGTTTAGGGGCTGGGGACAGGGTGGGGAGTTGTTACGCAAGGTaGAGCCTCTGTTGCCATGGA +
Preference number: 4 (lower is better)
Translates to: PEGLNQEVSCLGAGDRVGSCYAR*SLCCHG
Trigger: TCCATGGCAACAGAGGCTCCACCTTGCGTAACAACT...CCCCACCCTGTCCCCAGCCCCTAAACAAGATACTTCTTGGTTAAGGCCCTCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CCA 90 bp ATGCCCCGTAGCCTTTCCCTTCCGGAGGGCCTTAACCAAGAAGTATCTTGTTTAGCCTCCTCCTGGGCATaGGGTAGGAGTTCCCTTGCC +
Preference number: 4 (lower is better)
Translates to: MPRSLSLPEGLNQEVSCLASSWA*GRSSLA
Trigger: GGCAAGGGAACTCCTACCCCATGCCCAGGAGGAGGC...TAAACAAGATACTTCTTGGTTAAGGCCCTCCGGAAGGGAAAGGCTACGGGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CCA 90 bp CTTCCGGAGGGCCTTAACCAAGAAGTATCTTGTTTAGGGGCTGGGGACAGGGTGAGGCCAAGACCTCACTaGAAGGAGGCAACTCAGCCT +
Preference number: 4 (lower is better)
Translates to: LPEGLNQEVSCLGAGDRVRPRPH*KEATQP
Trigger: AGGCTGAGTTGCCTCCTTCCAGTGAGGTCTTGGCCT...CACCCTGTCCCCAGCCCCTAAACAAGATACTTCTTGGTTAAGGCCCTCCGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CCA 90 bp ATGAGGCACATGCCCCGTAGCCTTTCCCTTCCGGAGGGCCTTAACCAAGAAGTATCACCTGGCTTGTCCTaGGCTGGAAAAACTGAGGCC +
Preference number: 4 (lower is better)
Translates to: MRHMPRSLSLPEGLNQEVSPGLS*AGKTEA
Trigger: GGCCTCAGTTTTTCCAGCCCAGGACAAGCCAGGTGA...TACTTCTTGGTTAAGGCCCTCCGGAAGGGAAAGGCTACGGGGCATGTGCCTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CCA 90 bp ATGCCCCGTAGCCTTTCCCTTCCGGAGGGCCTTAACCAAGAAGTATCTTGTTTACCGTGTGGTCCAGTGTaGCCTGCAGCTCACCTGGCT +
Preference number: 4 (lower is better)
Translates to: MPRSLSLPEGLNQEVSCLPCGPV*PAAHLA
Trigger: AGCCAGGTGAGCTGCAGGCCACACTGGACCACACGG...TAAACAAGATACTTCTTGGTTAAGGCCCTCCGGAAGGGAAAGGCTACGGGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CCA 90 bp CCACAGGTTGGACAGGTTTTTATTGGAGAGTCAGGAGTTACTTTCCTTCCCTCGGAGGTGTGCCCCGTGTaGTCCAGTGTGGCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: PQVGQVFIGESGVTFLPSEVCPV*SSVACS
Trigger: GCTGCAGGCCACACTGGACCACACGGGGCACACCTC...CGAGGGAAGGAAAGTAACTCCTGACTCTCCAATAAAAACCTGTCCAACCTGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373674.4
ENST00000611814.4
CDS-3UTR CCA 90 bp CTTCCGGAGGGCCTTAACCAAGAAGTATCTTGTTTAGGGGCTGGGGACAGGGTGCGGTGGCAGAGGTATTaGGGAAATTGGGCAGGGACT +
Preference number: 4 (lower is better)
Translates to: LPEGLNQEVSCLGAGDRVRWQRY*GNWAGT
Trigger: AGTCCCTGCCCAATTTCCCCAATACCTCTGCCACCG...CACCCTGTCCCCAGCCCCTAAACAAGATACTTCTTGGTTAAGGCCCTCCGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CCA 90 bp ATGAGGCACATGCCCCGTAGCCTTTCCCTTCCGGAGGGCCTTAACCAAGAAGTACGGTGGCAGAGGTATTaGGGAAATTGGGCAGGGACT +
Preference number: 4 (lower is better)
Translates to: MRHMPRSLSLPEGLNQEVRWQRY*GNWAGT
Trigger: AGTCCCTGCCCAATTTCCCCAATACCTCTGCCACCG...TACTTCTTGGTTAAGGCCCTCCGGAAGGGAAAGGCTACGGGGCATGTGCCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CCA 90 bp ATGCCCCGTAGCCTTTCCCTTCCGGAGGGCCTTAACCAAGAAGTATCTTGTTTAAGGGCCCTCTGCACCTaGCAAGGACGACTGCAGAGC +
Preference number: 4 (lower is better)
Translates to: MPRSLSLPEGLNQEVSCLRALCT*QGRLQS
Trigger: GCTCTGCAGTCGTCCTTGCCAGGTGCAGAGGGCCCT...TAAACAAGATACTTCTTGGTTAAGGCCCTCCGGAAGGGAAAGGCTACGGGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CCA 90 bp ATGAGGCACATGCCCCGTAGCCTTTCCCTTCCGGAGGGCCTTAACCAAGAAGTAAGAACCCCACTCCAGTaGGGCTTGTCCTTCATCTGC +
Preference number: 4 (lower is better)
Translates to: MRHMPRSLSLPEGLNQEVRTPLQ*GLSFIC
Trigger: GCAGATGAAGGACAAGCCCCACTGGAGTGGGGTTCT...TACTTCTTGGTTAAGGCCCTCCGGAAGGGAAAGGCTACGGGGCATGTGCCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CCA 90 bp ATGAGGCACATGCCCCGTAGCCTTTCCCTTCCGGAGGGCCTTAACCAAGAAGTACACTACAGGTTGCCCTaGTGTGGTCATCTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: MRHMPRSLSLPEGLNQEVHYRLP*CGHLCG
Trigger: GCCACAGAGATGACCACACCAGGGCAACCTGTAGTG...TACTTCTTGGTTAAGGCCCTCCGGAAGGGAAAGGCTACGGGGCATGTGCCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611814.4
ENST00000647861.1
CDS-3UTR TCA 90 bp ATGCCCCGTAGCCTTTCCCTTCCGGAGGGCCTTAACCAAGAAGTATCTTGTTTAGTTTCTCCTCATCTGTaGGGGCTCCAACGGGGCCTG +
Preference number: 4 (lower is better)
Translates to: MPRSLSLPEGLNQEVSCLVSPHL*GLQRGL
Trigger: CAGGCCCCGTTGGAGCCCTCACAGATGAGGAGAAAC...TAAACAAGATACTTCTTGGTTAAGGCCCTCCGGAAGGGAAAGGCTACGGGGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR GCA 90 bp ATGCCCCGTAGCCTTTCCCTTCCGGAGGGCCTTAACCAAGAAGTATCTTGTTTATGGTCCAGTGTGGCCTaGAGCTCACCTGGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: MPRSLSLPEGLNQEVSCLWSSVA*SSPGLS
Trigger: GGACAAGCCAGGTGAGCTGCAGGCCACACTGGACCA...TAAACAAGATACTTCTTGGTTAAGGCCCTCCGGAAGGGAAAGGCTACGGGGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR GCA 90 bp CCACAGGTTGGACAGGTTTTTATTGGAGAGTCAGGAGTTACTTTCCTTCCCTCGCAGGGAGAGCGCACATaGTGTGTGGGCAGACAGCCC +
Preference number: 4 (lower is better)
Translates to: PQVGQVFIGESGVTFLPSQGERT*CVGRQP
Trigger: GGGCTGTCTGCCCACACAGCATGTGCGCTCTCCCTG...CGAGGGAAGGAAAGTAACTCCTGACTCTCCAATAAAAACCTGTCCAACCTGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373674.4
ENST00000611814.4
CDS-3UTR GCA 90 bp CTTCCGGAGGGCCTTAACCAAGAAGTATCTTGTTTAGGGGCTGGGGACAGGGTGACTGGCACTACAGGTTaGCCTGGTGTGGTCATCTCT +
Preference number: 4 (lower is better)
Translates to: LPEGLNQEVSCLGAGDRVTGTTG*PGVVIS
Trigger: AGAGATGACCACACCAGGGCAACCTGTAGTGCCAGT...CACCCTGTCCCCAGCCCCTAAACAAGATACTTCTTGGTTAAGGCCCTCCGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CCA 90 bp ATGCCCCGTAGCCTTTCCCTTCCGGAGGGCCTTAACCAAGAAGTATCTTGTTTAAGGAGCCGTGCATGGTaGCCAGCCGTCTCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: MPRSLSLPEGLNQEVSCLRSRAW*PAVSPS
Trigger: AGAAGGAGAGACGGCTGGCCACCATGCACGGCTCCT...TAAACAAGATACTTCTTGGTTAAGGCCCTCCGGAAGGGAAAGGCTACGGGGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CCA 90 bp CTTCCGGAGGGCCTTAACCAAGAAGTATCTTGTTTAGGGGCTGGGGACAGGGTGAGCTTCTCACAGAAGTaGGAACCACAGCCGATCCTC +
Preference number: 4 (lower is better)
Translates to: LPEGLNQEVSCLGAGDRVSFSQK*EPQPIL
Trigger: GAGGATCGGCTGTGGTTCCCACTTCTGTGAGAAGCT...CACCCTGTCCCCAGCCCCTAAACAAGATACTTCTTGGTTAAGGCCCTCCGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CCA 90 bp CTTCCGGAGGGCCTTAACCAAGAAGTATCTTGTTTAGGGGCTGGGGACAGGGTGGTCTCCTCAACACCCTaGAGCTTCTCACAGAAGTGG +
Preference number: 4 (lower is better)
Translates to: LPEGLNQEVSCLGAGDRVVSSTP*SFSQKW
Trigger: CCACTTCTGTGAGAAGCTCCAGGGTGTTGAGGAGAC...CACCCTGTCCCCAGCCCCTAAACAAGATACTTCTTGGTTAAGGCCCTCCGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CCA 90 bp CCGGAGGGCCTTAACCAAGAAGTATCTTGTTTAGGGGCTGGGGACAGGGTGGGGCCAGTAATTCGATGTTaGTCTCCTCAACACCCTGGA +
Preference number: 4 (lower is better)
Translates to: PEGLNQEVSCLGAGDRVGPVIRC*SPQHPG
Trigger: TCCAGGGTGTTGAGGAGACCAACATCGAATTACTGG...CCCCACCCTGTCCCCAGCCCCTAAACAAGATACTTCTTGGTTAAGGCCCTCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CCA 90 bp ATGAGGCACATGCCCCGTAGCCTTTCCCTTCCGGAGGGCCTTAACCAAGAAGTACTGTCAGGGACATCTTaGGGTCCAGAGAGTTCTCTG +
Preference number: 4 (lower is better)
Translates to: MRHMPRSLSLPEGLNQEVLSGTS*GPESSL
Trigger: CAGAGAACTCTCTGGACCCCAAGATGTCCCTGACAG...TACTTCTTGGTTAAGGCCCTCCGGAAGGGAAAGGCTACGGGGCATGTGCCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CCA 90 bp ATGAGGCACATGCCCCGTAGCCTTTCCCTTCCGGAGGGCCTTAACCAAGAAGTAATCTTGTTTAGGGGCTaGGGACAGGGTGGGGAAGAT +
Preference number: 4 (lower is better)
Translates to: MRHMPRSLSLPEGLNQEVILFRG*GQGGED
Trigger: ATCTTCCCCACCCTGTCCCCAGCCCCTAAACAAGAT...TACTTCTTGGTTAAGGCCCTCCGGAAGGGAAAGGCTACGGGGCATGTGCCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CCA 90 bp ATGCCCCGTAGCCTTTCCCTTCCGGAGGGCCTTAACCAAGAAGTATCTTGTTTAAAGCACCACCCTGGCTaGCCTGGGAAGTGCTGGACT +
Preference number: 4 (lower is better)
Translates to: MPRSLSLPEGLNQEVSCLKHHPG*PGKCWT
Trigger: AGTCCAGCACTTCCCAGGCCAGCCAGGGTGGTGCTT...TAAACAAGATACTTCTTGGTTAAGGCCCTCCGGAAGGGAAAGGCTACGGGGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611814.4
CDS-3UTR CCA 90 bp ATGAGGCACATGCCCCGTAGCCTTTCCCTTCCGGAGGGCCTTAACCAAGAAGTATCACACTCATTAGGATaGCTGGCCTGGGAAGTGCTG +
Preference number: 4 (lower is better)
Translates to: MRHMPRSLSLPEGLNQEVSHSLG*LAWEVL
Trigger: CAGCACTTCCCAGGCCAGCCATCCTAATGAGTGTGA...TACTTCTTGGTTAAGGCCCTCCGGAAGGGAAAGGCTACGGGGCATGTGCCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647861.1
CDS-3UTR TCA 90 bp CCACAGGTTGGACAGGTTTTTATTGGAGAGTCAGGAGTTACTTTCCTTCCCTCGGTTTCTCCTCATCTGTaGGGGCTCCAACGGGGCCTG +
Preference number: 4 (lower is better)
Translates to: PQVGQVFIGESGVTFLPSVSPHL*GLQRGL
Trigger: CAGGCCCCGTTGGAGCCCTCACAGATGAGGAGAAAC...CGAGGGAAGGAAAGTAACTCCTGACTCTCCAATAAAAACCTGTCCAACCTGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373674.4
ENST00000611814.4
CDS-3UTR TCA 90 bp CCACAGGTTGGACAGGTTTTTATTGGAGAGTCAGGAGTTACTTTCCTTCCCTCGCATGTGCAGCATGTCTaGGGCCGTCGGGGATACCTG +
Preference number: 4 (lower is better)
Translates to: PQVGQVFIGESGVTFLPSHVQHV*GRRGYL
Trigger: CAGGTATCCCCGACGGCCTCAGACATGCTGCACATG...CGAGGGAAGGAAAGTAACTCCTGACTCTCCAATAAAAACCTGTCCAACCTGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373674.4
ENST00000611814.4
CDS-3UTR TCA 90 bp CTTCCGGAGGGCCTTAACCAAGAAGTATCTTGTTTAGGGGCTGGGGACAGGGTGCATTTTCCTAGAGTCTaGTGCTTCAGTCGCCCGGAA +
Preference number: 4 (lower is better)
Translates to: LPEGLNQEVSCLGAGDRVHFPRV*CFSRPE
Trigger: TTCCGGGCGACTGAAGCATCAGACTCTAGGAAAATG...CACCCTGTCCCCAGCCCCTAAACAAGATACTTCTTGGTTAAGGCCCTCCGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR GCA 90 bp ATGCCCCGTAGCCTTTCCCTTCCGGAGGGCCTTAACCAAGAAGTATCTTGTTTAAGGTGGAGCCTCTGTTaGCATGGAGGGCGGGTCTTT +
Preference number: 4 (lower is better)
Translates to: MPRSLSLPEGLNQEVSCLRWSLC*HGGRVF
Trigger: AAAGACCCGCCCTCCATGGCAACAGAGGCTCCACCT...TAAACAAGATACTTCTTGGTTAAGGCCCTCCGGAAGGGAAAGGCTACGGGGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CCA 90 bp CCACAGGTTGGACAGGTTTTTATTGGAGAGTCAGGAGTTACTTTCCTTCCCTCGAGGAGCCGTGCATGGTaGCCAGCCGTCTCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: PQVGQVFIGESGVTFLPSRSRAW*PAVSPS
Trigger: AGAAGGAGAGACGGCTGGCCACCATGCACGGCTCCT...CGAGGGAAGGAAAGTAACTCCTGACTCTCCAATAAAAACCTGTCCAACCTGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373674.4
ENST00000611814.4
CDS-3UTR CCA 90 bp ATGCCCCGTAGCCTTTCCCTTCCGGAGGGCCTTAACCAAGAAGTATCTTGTTTAGAGCCTCTGTTGCCATaGAGGGCGGGTCTTTCGTTG +
Preference number: 4 (lower is better)
Translates to: MPRSLSLPEGLNQEVSCLEPLLP*RAGLSL
Trigger: CAACGAAAGACCCGCCCTCCATGGCAACAGAGGCTC...TAAACAAGATACTTCTTGGTTAAGGCCCTCCGGAAGGGAAAGGCTACGGGGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CCA 90 bp ATGAGGCACATGCCCCGTAGCCTTTCCCTTCCGGAGGGCCTTAACCAAGAAGTAAGTTGTTACGCAAGGTaGAGCCTCTGTTGCCATGGA +
Preference number: 4 (lower is better)
Translates to: MRHMPRSLSLPEGLNQEVSCYAR*SLCCHG
Trigger: TCCATGGCAACAGAGGCTCCACCTTGCGTAACAACT...TACTTCTTGGTTAAGGCCCTCCGGAAGGGAAAGGCTACGGGGCATGTGCCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CCA 90 bp CCACAGGTTGGACAGGTTTTTATTGGAGAGTCAGGAGTTACTTTCCTTCCCTCGGGTGGAACCAGGCACTaGCACTACAGGTTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: PQVGQVFIGESGVTFLPSGGTRH*HYRLPW
Trigger: CCAGGGCAACCTGTAGTGCCAGTGCCTGGTTCCACC...CGAGGGAAGGAAAGTAACTCCTGACTCTCCAATAAAAACCTGTCCAACCTGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611814.4
CDS-3UTR TCA 90 bp CCACAGGTTGGACAGGTTTTTATTGGAGAGTCAGGAGTTACTTTCCTTCCCTCGCCATGCCCTCGTCTGTaGTGGCGAACAGATTCTCGC +
Preference number: 4 (lower is better)
Translates to: PQVGQVFIGESGVTFLPSPCPRL*WRTDSR
Trigger: GCGAGAATCTGTTCGCCATCACAGACGAGGGCATGG...CGAGGGAAGGAAAGTAACTCCTGACTCTCCAATAAAAACCTGTCCAACCTGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373674.4
ENST00000611814.4
CDS-3UTR TCA 90 bp ATGCCCCGTAGCCTTTCCCTTCCGGAGGGCCTTAACCAAGAAGTATCTTGTTTAGGTTGCCAGGGAGCCTaGGACCTCTGTTACCAAGAA +
Preference number: 4 (lower is better)
Translates to: MPRSLSLPEGLNQEVSCLGCQGA*DLCYQE
Trigger: TTCTTGGTAACAGAGGTCTCAGGCTCCCTGGCAACC...TAAACAAGATACTTCTTGGTTAAGGCCCTCCGGAAGGGAAAGGCTACGGGGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR TCA 90 bp ATGCCCCGTAGCCTTTCCCTTCCGGAGGGCCTTAACCAAGAAGTATCTTGTTTACTGGGCTGGAAAAACTaGGGCCAAGACCTCACTGGA +
Preference number: 4 (lower is better)
Translates to: MPRSLSLPEGLNQEVSCLLGWKN*GQDLTG
Trigger: TCCAGTGAGGTCTTGGCCTCAGTTTTTCCAGCCCAG...TAAACAAGATACTTCTTGGTTAAGGCCCTCCGGAAGGGAAAGGCTACGGGGCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR GCA 90 bp ATGCCCCGTAGCCTTTCCCTTCCGGAGGGCCTTAACCAAGAAGTATCTTGTTTATCGTCCCATCTCATGTaGAGCATGTCTGAGGCCGTC +
Preference number: 4 (lower is better)
Translates to: MPRSLSLPEGLNQEVSCLSSHLM*SMSEAV
Trigger: GACGGCCTCAGACATGCTGCACATGAGATGGGACGA...TAAACAAGATACTTCTTGGTTAAGGCCCTCCGGAAGGGAAAGGCTACGGGGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR GCA 90 bp CTTCCGGAGGGCCTTAACCAAGAAGTATCTTGTTTAGGGGCTGGGGACAGGGTGCCGGAGGCTCATAGTTaGACACCAGTAATTCGATGT +
Preference number: 4 (lower is better)
Translates to: LPEGLNQEVSCLGAGDRVPEAHS*TPVIRC
Trigger: ACATCGAATTACTGGTGTGCAACTATGAGCCTCCGG...CACCCTGTCCCCAGCCCCTAAACAAGATACTTCTTGGTTAAGGCCCTCCGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR GCA 90 bp CCACAGGTTGGACAGGTTTTTATTGGAGAGTCAGGAGTTACTTTCCTTCCCTCGCATCTCTGTGGCCTCTaGCTCCAGTCATGCCCCTTC +
Preference number: 4 (lower is better)
Translates to: PQVGQVFIGESGVTFLPSHLCGL*LQSCPF
Trigger: GAAGGGGCATGACTGGAGGCAGAGGCCACAGAGATG...CGAGGGAAGGAAAGTAACTCCTGACTCTCCAATAAAAACCTGTCCAACCTGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611814.4
CDS-3UTR CCA 90 bp ATGAGGCACATGCCCCGTAGCCTTTCCCTTCCGGAGGGCCTTAACCAAGAAGTACCAGTAATTCGATGTTaGTCTCCTCAACACCCTGGA +
Preference number: 4 (lower is better)
Translates to: MRHMPRSLSLPEGLNQEVPVIRC*SPQHPG
Trigger: TCCAGGGTGTTGAGGAGACCAACATCGAATTACTGG...TACTTCTTGGTTAAGGCCCTCCGGAAGGGAAAGGCTACGGGGCATGTGCCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CCA 90 bp ATGCCCCGTAGCCTTTCCCTTCCGGAGGGCCTTAACCAAGAAGTATCTTGTTTACTTCCGGGCTTCCGATaGGTTCACAGAGGGAGTTCT +
Preference number: 4 (lower is better)
Translates to: MPRSLSLPEGLNQEVSCLLPGFR*VHRGSS
Trigger: AGAACTCCCTCTGTGAACCCATCGGAAGCCCGGAAG...TAAACAAGATACTTCTTGGTTAAGGCCCTCCGGAAGGGAAAGGCTACGGGGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CCA 90 bp ATGCCCCGTAGCCTTTCCCTTCCGGAGGGCCTTAACCAAGAAGTATCTTGTTTAAAGGAAGTTGGGGCCTaGGTTTCCACAGCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: MPRSLSLPEGLNQEVSCLKEVGA*VSTAGR
Trigger: TCTGCCTGCTGTGGAAACCCAGGCCCCAACTTCCTT...TAAACAAGATACTTCTTGGTTAAGGCCCTCCGGAAGGGAAAGGCTACGGGGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CCA 90 bp CCACAGGTTGGACAGGTTTTTATTGGAGAGTCAGGAGTTACTTTCCTTCCCTCGGAGCCTCTGTTGCCATaGAGGGCGGGTCTTTCGTTG +
Preference number: 4 (lower is better)
Translates to: PQVGQVFIGESGVTFLPSEPLLP*RAGLSL
Trigger: CAACGAAAGACCCGCCCTCCATGGCAACAGAGGCTC...CGAGGGAAGGAAAGTAACTCCTGACTCTCCAATAAAAACCTGTCCAACCTGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373674.4
ENST00000611814.4
CDS-3UTR CCA 90 bp ATGCCCCGTAGCCTTTCCCTTCCGGAGGGCCTTAACCAAGAAGTATCTTGTTTATCACCTGGCTTGTCCTaGGCTGGAAAAACTGAGGCC +
Preference number: 4 (lower is better)
Translates to: MPRSLSLPEGLNQEVSCLSPGLS*AGKTEA
Trigger: GGCCTCAGTTTTTCCAGCCCAGGACAAGCCAGGTGA...TAAACAAGATACTTCTTGGTTAAGGCCCTCCGGAAGGGAAAGGCTACGGGGCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CCA 90 bp CCACAGGTTGGACAGGTTTTTATTGGAGAGTCAGGAGTTACTTTCCTTCCCTCGCAGGTTGCCCTGGTGTaGTCATCTCTGTGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: PQVGQVFIGESGVTFLPSQVALV*SSLWPL
Trigger: CAGAGGCCACAGAGATGACCACACCAGGGCAACCTG...CGAGGGAAGGAAAGTAACTCCTGACTCTCCAATAAAAACCTGTCCAACCTGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611814.4
CDS-3UTR CCA 90 bp ATGCCCCGTAGCCTTTCCCTTCCGGAGGGCCTTAACCAAGAAGTATCTTGTTTACACTACAGGTTGCCCTaGTGTGGTCATCTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: MPRSLSLPEGLNQEVSCLHYRLP*CGHLCG
Trigger: GCCACAGAGATGACCACACCAGGGCAACCTGTAGTG...TAAACAAGATACTTCTTGGTTAAGGCCCTCCGGAAGGGAAAGGCTACGGGGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CCA 90 bp ATGCCCCGTAGCCTTTCCCTTCCGGAGGGCCTTAACCAAGAAGTATCTTGTTTATCCCGTCCAGGGGTCTaGCAGCTGGATTTAAAGTCC +
Preference number: 4 (lower is better)
Translates to: MPRSLSLPEGLNQEVSCLSRPGV*QLDLKS
Trigger: GGACTTTAAATCCAGCTGCCAGACCCCTGGACGGGA...TAAACAAGATACTTCTTGGTTAAGGCCCTCCGGAAGGGAAAGGCTACGGGGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CCA 90 bp CCACAGGTTGGACAGGTTTTTATTGGAGAGTCAGGAGTTACTTTCCTTCCCTCGCGATCCTCTCTGTCTTaGCCCATACCACCTGCGTGT +
Preference number: 4 (lower is better)
Translates to: PQVGQVFIGESGVTFLPSRSSLS*PIPPAC
Trigger: ACACGCAGGTGGTATGGGCCAAGACAGAGAGGATCG...CGAGGGAAGGAAAGTAACTCCTGACTCTCCAATAAAAACCTGTCCAACCTGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373674.4
ENST00000611814.4
CDS-3UTR CCA 90 bp ATGCCCCGTAGCCTTTCCCTTCCGGAGGGCCTTAACCAAGAAGTATCTTGTTTAGTCTCCTCAACACCCTaGAGCTTCTCACAGAAGTGG +
Preference number: 4 (lower is better)
Translates to: MPRSLSLPEGLNQEVSCLVSSTP*SFSQKW
Trigger: CCACTTCTGTGAGAAGCTCCAGGGTGTTGAGGAGAC...TAAACAAGATACTTCTTGGTTAAGGCCCTCCGGAAGGGAAAGGCTACGGGGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CCA 90 bp ATGCCCCGTAGCCTTTCCCTTCCGGAGGGCCTTAACCAAGAAGTATCTTGTTTATTTGGGGAAGGTAACTaGCTCCTCATCCAAGGAGGG +
Preference number: 4 (lower is better)
Translates to: MPRSLSLPEGLNQEVSCLFGEGN*LLIQGG
Trigger: CCCTCCTTGGATGAGGAGCCAGTTACCTTCCCCAAA...TAAACAAGATACTTCTTGGTTAAGGCCCTCCGGAAGGGAAAGGCTACGGGGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CCA 90 bp ATGCCCCGTAGCCTTTCCCTTCCGGAGGGCCTTAACCAAGAAGTATCTTGTTTAGTCCAGAGAGTTCTCTaGGCTCCTAGAGGGCACTTT +
Preference number: 4 (lower is better)
Translates to: MPRSLSLPEGLNQEVSCLVQRVL*APRGHF
Trigger: AAAGTGCCCTCTAGGAGCCCAGAGAACTCTCTGGAC...TAAACAAGATACTTCTTGGTTAAGGCCCTCCGGAAGGGAAAGGCTACGGGGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CCA 90 bp ATGCCCCGTAGCCTTTCCCTTCCGGAGGGCCTTAACCAAGAAGTATCTTGTTTAAGGTATTGGGGAAATTaGGCAGGGACTTGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: MPRSLSLPEGLNQEVSCLRYWGN*AGTWRR
Trigger: CCTCCTCCAAGTCCCTGCCCAATTTCCCCAATACCT...TAAACAAGATACTTCTTGGTTAAGGCCCTCCGGAAGGGAAAGGCTACGGGGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CCA 90 bp ATGCCCCGTAGCCTTTCCCTTCCGGAGGGCCTTAACCAAGAAGTATCTTGTTTAATCTTGTTTAGGGGCTaGGGACAGGGTGGGGAAGAT +
Preference number: 4 (lower is better)
Translates to: MPRSLSLPEGLNQEVSCLILFRG*GQGGED
Trigger: ATCTTCCCCACCCTGTCCCCAGCCCCTAAACAAGAT...TAAACAAGATACTTCTTGGTTAAGGCCCTCCGGAAGGGAAAGGCTACGGGGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CCA 90 bp CCACAGGTTGGACAGGTTTTTATTGGAGAGTCAGGAGTTACTTTCCTTCCCTCGTCCCGTCCAGGGGTCTaGCAGCTGGATTTAAAGTCC +
Preference number: 4 (lower is better)
Translates to: PQVGQVFIGESGVTFLPSSRPGV*QLDLKS
Trigger: GGACTTTAAATCCAGCTGCCAGACCCCTGGACGGGA...CGAGGGAAGGAAAGTAACTCCTGACTCTCCAATAAAAACCTGTCCAACCTGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611814.4
CDS-3UTR TCA 90 bp ATGCCCCGTAGCCTTTCCCTTCCGGAGGGCCTTAACCAAGAAGTATCTTGTTTAGACCTCTTCACCCTTTaGGTGGTATCCCCTTCAGAA +
Preference number: 4 (lower is better)
Translates to: MPRSLSLPEGLNQEVSCLDLFTL*VVSPSE
Trigger: TTCTGAAGGGGATACCACTCAAAGGGTGAAGAGGTC...TAAACAAGATACTTCTTGGTTAAGGCCCTCCGGAAGGGAAAGGCTACGGGGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CCA 90 bp ATGCCCCGTAGCCTTTCCCTTCCGGAGGGCCTTAACCAAGAAGTATCTTGTTTAAGTTGTTACGCAAGGTaGAGCCTCTGTTGCCATGGA +
Preference number: 4 (lower is better)
Translates to: MPRSLSLPEGLNQEVSCLSCYAR*SLCCHG
Trigger: TCCATGGCAACAGAGGCTCCACCTTGCGTAACAACT...TAAACAAGATACTTCTTGGTTAAGGCCCTCCGGAAGGGAAAGGCTACGGGGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CCA 90 bp CCACAGGTTGGACAGGTTTTTATTGGAGAGTCAGGAGTTACTTTCCTTCCCTCGCTGTCAGGGACATCTTaGGGTCCAGAGAGTTCTCTG +
Preference number: 4 (lower is better)
Translates to: PQVGQVFIGESGVTFLPSLSGTS*GPESSL
Trigger: CAGAGAACTCTCTGGACCCCAAGATGTCCCTGACAG...CGAGGGAAGGAAAGTAACTCCTGACTCTCCAATAAAAACCTGTCCAACCTGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373674.4
ENST00000611814.4
CDS-3UTR CCA 90 bp CTTCCGGAGGGCCTTAACCAAGAAGTATCTTGTTTAGGGGCTGGGGACAGGGTGTCTTCACCCTTTGAGTaGTATCCCCTTCAGAAGATT +
Preference number: 4 (lower is better)
Translates to: LPEGLNQEVSCLGAGDRVSSPFE*YPLQKI
Trigger: AATCTTCTGAAGGGGATACCACTCAAAGGGTGAAGA...CACCCTGTCCCCAGCCCCTAAACAAGATACTTCTTGGTTAAGGCCCTCCGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CCA 90 bp ATGCCCCGTAGCCTTTCCCTTCCGGAGGGCCTTAACCAAGAAGTATCTTGTTTACAAGTGCACTCCCCTTaGAGTCCTTGGCAAAAACCT +
Preference number: 4 (lower is better)
Translates to: MPRSLSLPEGLNQEVSCLQVHSP*SPWQKP
Trigger: AGGTTTTTGCCAAGGACTCCAAGGGGAGTGCACTTG...TAAACAAGATACTTCTTGGTTAAGGCCCTCCGGAAGGGAAAGGCTACGGGGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000647861.1
CDS-3UTR TCA 90 bp CCACAGGTTGGACAGGTTTTTATTGGAGAGTCAGGAGTTACTTTCCTTCCCTCGGACCTCTTCACCCTTTaGGTGGTATCCCCTTCAGAA +
Preference number: 4 (lower is better)
Translates to: PQVGQVFIGESGVTFLPSDLFTL*VVSPSE
Trigger: TTCTGAAGGGGATACCACTCAAAGGGTGAAGAGGTC...CGAGGGAAGGAAAGTAACTCCTGACTCTCCAATAAAAACCTGTCCAACCTGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373674.4
ENST00000611814.4
CDS-3UTR GCA 90 bp ATGCCCCGTAGCCTTTCCCTTCCGGAGGGCCTTAACCAAGAAGTATCTTGTTTACCGGAGGCTCATAGTTaGACACCAGTAATTCGATGT +
Preference number: 4 (lower is better)
Translates to: MPRSLSLPEGLNQEVSCLPEAHS*TPVIRC
Trigger: ACATCGAATTACTGGTGTGCAACTATGAGCCTCCGG...TAAACAAGATACTTCTTGGTTAAGGCCCTCCGGAAGGGAAAGGCTACGGGGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CCA 90 bp ATGCCCCGTAGCCTTTCCCTTCCGGAGGGCCTTAACCAAGAAGTATCTTGTTTATCCCCTTGGAGTCCTTaGCAAAAACCTCCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: MPRSLSLPEGLNQEVSCLSPWSP*QKPPFS
Trigger: AGAGAAAGGAGGTTTTTGCCAAGGACTCCAAGGGGA...TAAACAAGATACTTCTTGGTTAAGGCCCTCCGGAAGGGAAAGGCTACGGGGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000647861.1
CDS-3UTR CCA 90 bp CCACAGGTTGGACAGGTTTTTATTGGAGAGTCAGGAGTTACTTTCCTTCCCTCGTCTTCACCCTTTGAGTaGTATCCCCTTCAGAAGATT +
Preference number: 4 (lower is better)
Translates to: PQVGQVFIGESGVTFLPSSSPFE*YPLQKI
Trigger: AATCTTCTGAAGGGGATACCACTCAAAGGGTGAAGA...CGAGGGAAGGAAAGTAACTCCTGACTCTCCAATAAAAACCTGTCCAACCTGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373674.4
ENST00000611814.4
CDS GCA 90 bp GCCGCGGCGCCCGCGCTCCTTGTTGTGGCCCCACACGCACTGCCGTaGGTAGGCCTTGGCGAAGGCGGCCAGCTCCTCGTCCCATCTCAT +
Preference number: 5 (lower is better)
Translates to: AAAPALLVVAPHALP*VGLGEGGQLLVPSH
Trigger: ATGAGATGGGACGAGGAGCTGGCCGCCTTCGCCAAGGCCTACGCACGGCAGTGCGTGTGGGGCCACAACAAGGAGCGCGGGCGCCGCGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CAA 90 bp GGGGCAGGAGAGGTGTGGGCCCGGTGTGCAGTCCTCAGGCGGCCTCCTGAGCTCGTAGCCAGAGGGACATaGGGAGCACGGAGTCCCCTC +
Preference number: 5 (lower is better)
Translates to: GAGEVWARCAVLRRPPELVARGT*GARSPL
Trigger: GAGGGGACTCCGTGCTCCCAATGTCCCTCTGGCTAC...GAGCTCAGGAGGCCGCCTGAGGACTGCACACCGGGCCCACACCTCTCCTGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CAA 90 bp GGGGCAGGAGAGGTGTGGGCCCGGTGTGCAGTCCTCAGGCGGCCTCCTGAGCTCAAGGTGGAGCCTCTGTaGCCATGGAGGGCGGGTCTT +
Preference number: 5 (lower is better)
Translates to: GAGEVWARCAVLRRPPELKVEPL*PWRAGL
Trigger: AAGACCCGCCCTCCATGGCAACAGAGGCTCCACCTT...GAGCTCAGGAGGCCGCCTGAGGACTGCACACCGGGCCCACACCTCTCCTGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS TCA 90 bp GGTGCCACTCCTCCATGGCCAGCGGCACGTCCATGCCCTCGTCTGTaGTGGCGAACAGATTCTCGCCGCGGCGCCCGCGCTCCTTGTTGT +
Preference number: 5 (lower is better)
Translates to: GATPPWPAARPCPRL*WRTDSRRGARAPCC
Trigger: ACAACAAGGAGCGCGGGCGCCGCGGCGAGAATCTGTTCGCCATCACAGACGAGGGCATGGACGTGCCGCTGGCCATGGAGGAGTGGCACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS TCA 90 bp TCCCAGGAGAGGGCCCCACACATGACCAGGGCCCGAGTTCAGCCCTaGCACGACGCTAGGCTTGTCAGGGCCCTCTGCACCTGGCAAGGA +
Preference number: 5 (lower is better)
Translates to: SQERAPHMTRARVQP*HDARLVRALCTWQG
Trigger: TCCTTGCCAGGTGCAGAGGGCCCTGACAAGCCTAGCGTCGTGTCAGGGCTGAACTCGGGCCCTGGTCATGTGTGGGGCCCTCTCCTGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS CCA 90 bp CGCGCTCCTTGTTGTGGCCCCACACGCACTGCCGTGCGTAGGCCTTaGCGAAGGCGGCCAGCTCCTCGTCCCATCTCATGTGCAGCATGT +
Preference number: 5 (lower is better)
Translates to: RAPCCGPTRTAVRRP*RRRPAPRPISCAAC
Trigger: ACATGCTGCACATGAGATGGGACGAGGAGCTGGCCGCCTTCGCCAAGGCCTACGCACGGCAGTGCGTGTGGGGCCACAACAAGGAGCGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CAA 90 bp GGGGCAGGAGAGGTGTGGGCCCGGTGTGCAGTCCTCAGGCGGCCTCCTGAGCTCAAGCCGGAATCCCCGTaGCTAGGGAAGAAGGAGTAC +
Preference number: 5 (lower is better)
Translates to: GAGEVWARCAVLRRPPELKPESP*LGKKEY
Trigger: GTACTCCTTCTTCCCTAGCAACGGGGATTCCGGCTT...GAGCTCAGGAGGCCGCCTGAGGACTGCACACCGGGCCCACACCTCTCCTGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CAA 90 bp GGGGCAGGAGAGGTGTGGGCCCGGTGTGCAGTCCTCAGGCGGCCTCCTGAGCTCTCGTTGCTAAGGAAGTaGGGGCCTGGGTTTCCACAG +
Preference number: 5 (lower is better)
Translates to: GAGEVWARCAVLRRPPELSLLRK*GPGFPQ
Trigger: CTGTGGAAACCCAGGCCCCAACTTCCTTAGCAACGA...GAGCTCAGGAGGCCGCCTGAGGACTGCACACCGGGCCCACACCTCTCCTGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CAA 90 bp GGGGCAGGAGAGGTGTGGGCCCGGTGTGCAGTCCTCAGGCGGCCTCCTGAGCTCTGGAAGGGACCTCAGTaGTTACGCAAGGTGGAGCCT +
Preference number: 5 (lower is better)
Translates to: GAGEVWARCAVLRRPPELWKGPQ*LRKVEP
Trigger: AGGCTCCACCTTGCGTAACAACTGAGGTCCCTTCCA...GAGCTCAGGAGGCCGCCTGAGGACTGCACACCGGGCCCACACCTCTCCTGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CAA 90 bp GGGGCAGGAGAGGTGTGGGCCCGGTGTGCAGTCCTCAGGCGGCCTCCTGAGCTCGGAACATGGGTCGATTaGGGGAAGGTAACTGGCTCC +
Preference number: 5 (lower is better)
Translates to: GAGEVWARCAVLRRPPELGTWVD*GKVTGS
Trigger: GGAGCCAGTTACCTTCCCCAAATCGACCCATGTTCC...GAGCTCAGGAGGCCGCCTGAGGACTGCACACCGGGCCCACACCTCTCCTGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS CCA 90 bp GTAGCGGCAGCAGAAGCATCAGGAAACTGCAGGAGCCGTGCATGGTaGCCAGCCGTCTCTCCTTCTCCCGTCCAGGGGTCTGGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: VAAAEASGNCRSRAW*PAVSPSPVQGSGSW
Trigger: CCAGCTGCCAGACCCCTGGACGGGAGAAGGAGAGACGGCTGGCCACCATGCACGGCTCCTGCAGTTTCCTGATGCTTCTGCTGCCGCTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611814.4
ENST00000647861.1
CDS CCA 90 bp GCAGTAGCGGCAGCAGAAGCATCAGGAAACTGCAGGAGCCGTGCATaGTGGCCAGCCGTCTCTCCTTCTCCCGTCCAGGGGTCTGGCAGC +
Preference number: 5 (lower is better)
Translates to: AVAAAEASGNCRSRA*WPAVSPSPVQGSGS
Trigger: GCTGCCAGACCCCTGGACGGGAGAAGGAGAGACGGCTGGCCACCATGCACGGCTCCTGCAGTTTCCTGATGCTTCTGCTGCCGCTACTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611814.4
ENST00000647861.1
CDS CCA 90 bp GGCCCAGCCCGACTCACACAATGTCTCAGGGAGGGCTGGGCGCTTTaGGTCCCGACCAGCATCAAGTGCACTCCCCTTGGAGTCCTTGGC +
Preference number: 5 (lower is better)
Translates to: GPARLTQCLREGWAL*VPTSIKCTPLGVLG
Trigger: GCCAAGGACTCCAAGGGGAGTGCACTTGATGCTGGTCGGGACCCAAAGCGCCCAGCCCTCCCTGAGACATTGTGTGAGTCGGGCTGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647861.1
CDS-3UTR CAA 90 bp GGGGCAGGAGAGGTGTGGGCCCGGTGTGCAGTCCTCAGGCGGCCTCCTGAGCTCCTCCCCTTGGAGTCCTaGGCAAAAACCTCCTTTCTC +
Preference number: 5 (lower is better)
Translates to: GAGEVWARCAVLRRPPELLPLES*AKTSFL
Trigger: GAGAAAGGAGGTTTTTGCCAAGGACTCCAAGGGGAG...GAGCTCAGGAGGCCGCCTGAGGACTGCACACCGGGCCCACACCTCTCCTGCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000647861.1
CDS TCA 90 bp TCCCAGGAGAGGGCCCCACACATGACCAGGGCCCGAGTTCAGCCCTaGCACGACGCTAGGCTTGTCAGGGCCCTCTGCACCCATTTTCCT +
Preference number: 5 (lower is better)
Translates to: SQERAPHMTRARVQP*HDARLVRALCTHFP
Trigger: AGGAAAATGGGTGCAGAGGGCCCTGACAAGCCTAGCGTCGTGTCAGGGCTGAACTCGGGCCCTGGTCATGTGTGGGGCCCTCTCCTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491324.1
CDS-3UTR CAA 90 bp CTTCCGGAGGGCCTTAACCAAGAAGTATCTTGTTTAGGGGCTGGGGACAGGGTGCGGCGCCCGCGCTCCTaGTTGTGGCCCCACACGCAC +
Preference number: 5 (lower is better)
Translates to: LPEGLNQEVSCLGAGDRVRRPRS*LWPHTH
Trigger: GTGCGTGTGGGGCCACAACAAGGAGCGCGGGCGCCG...CACCCTGTCCCCAGCCCCTAAACAAGATACTTCTTGGTTAAGGCCCTCCGGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CAA 90 bp GGGGCAGGAGAGGTGTGGGCCCGGTGTGCAGTCCTCAGGCGGCCTCCTGAGCTCACCAGTAATTCGATGTaGGTCTCCTCAACACCCTGG +
Preference number: 5 (lower is better)
Translates to: GAGEVWARCAVLRRPPELTSNSM*VSSTPW
Trigger: CCAGGGTGTTGAGGAGACCAACATCGAATTACTGGT...GAGCTCAGGAGGCCGCCTGAGGACTGCACACCGGGCCCACACCTCTCCTGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS GCA 90 bp AGTAGCAGTAGCGGCAGCAGAAGCATCAGGAAACTGCAGGAGCCGTaGATGGTGGCCAGCCGTCTCTCCTTCTCCCGTCCAGGGGTCTGG +
Preference number: 5 (lower is better)
Translates to: SSSSGSRSIRKLQEP*MVASRLSFSRPGVW
Trigger: CCAGACCCCTGGACGGGAGAAGGAGAGACGGCTGGCCACCATGCACGGCTCCTGCAGTTTCCTGATGCTTCTGCTGCCGCTACTGCTACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611814.4
ENST00000647861.1
CDS CCA 90 bp GTATTGGGGAAATTGGGCAGGGACTTGGAGGAGGTGTGCCCCGTGTaGTCCAGTGTGGCCTGCAGCTCACCTGGCTTGTCCTGGGCTGGA +
Preference number: 5 (lower is better)
Translates to: VLGKLGRDLEEVCPV*SSVACSSPGLSWAG
Trigger: TCCAGCCCAGGACAAGCCAGGTGAGCTGCAGGCCACACTGGACCACACGGGGCACACCTCCTCCAAGTCCCTGCCCAATTTCCCCAATAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS CCA 90 bp CCGTGCATGGTGGCCAGCCGTCTCTCCTTCTCCCGTCCAGGGGTCTaGCAGCTGGATTTAAAGTCCTTCCCACACAAGCACCACCCTGGC +
Preference number: 5 (lower is better)
Translates to: PCMVASRLSFSRPGV*QLDLKSFPHKHHPG
Trigger: GCCAGGGTGGTGCTTGTGTGGGAAGGACTTTAAATCCAGCTGCCAGACCCCTGGACGGGAGAAGGAGAGACGGCTGGCCACCATGCACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CAA 90 bp CTTCCGGAGGGCCTTAACCAAGAAGTATCTTGTTTAGGGGCTGGGGACAGGGTGCGCCCGCGCTCCTTGTaGTGGCCCCACACGCACTGC +
Preference number: 5 (lower is better)
Translates to: LPEGLNQEVSCLGAGDRVRPRSL*WPHTHC
Trigger: GCAGTGCGTGTGGGGCCACAACAAGGAGCGCGGGCG...CACCCTGTCCCCAGCCCCTAAACAAGATACTTCTTGGTTAAGGCCCTCCGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS GCA 90 bp CCTGGGAAGTGCTGGACTCAGGAATGGAAGGACACAGTTCTCAGATaGCCCCCGGGTGGAACCAGGCACTGGCACTACAGGTTGCCCTGG +
Preference number: 5 (lower is better)
Translates to: PGKCWTQEWKDTVLR*PPGGTRHWHYRLPW
Trigger: CCAGGGCAACCTGTAGTGCCAGTGCCTGGTTCCACCCGGGGGGCATCTGAGAACTGTGTCCTTCCATTCCTGAGTCCAGCACTTCCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CAA 90 bp CCGGAGGGCCTTAACCAAGAAGTATCTTGTTTAGGGGCTGGGGACAGGGTGGGGGTAGCCAGAGGGACATaGGGAGCACGGAGTCCCCTC +
Preference number: 5 (lower is better)
Translates to: PEGLNQEVSCLGAGDRVGVARGT*GARSPL
Trigger: GAGGGGACTCCGTGCTCCCAATGTCCCTCTGGCTAC...CCCCACCCTGTCCCCAGCCCCTAAACAAGATACTTCTTGGTTAAGGCCCTCCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CAA 90 bp CCGGAGGGCCTTAACCAAGAAGTATCTTGTTTAGGGGCTGGGGACAGGGTGGGGACAGCAGGCAGAGCCTaGGTTGCCAGGGAGCCTGAG +
Preference number: 5 (lower is better)
Translates to: PEGLNQEVSCLGAGDRVGTAGRA*VAREPE
Trigger: CTCAGGCTCCCTGGCAACCAAGGCTCTGCCTGCTGT...CCCCACCCTGTCCCCAGCCCCTAAACAAGATACTTCTTGGTTAAGGCCCTCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CAA 90 bp GGGGCAGGAGAGGTGTGGGCCCGGTGTGCAGTCCTCAGGCGGCCTCCTGAGCTCGAGGGCACTTTTGTTTaGTCTGTCACTTTGTCTGCT +
Preference number: 5 (lower is better)
Translates to: GAGEVWARCAVLRRPPELEGTFV*SVTLSA
Trigger: AGCAGACAAAGTGACAGACAAAACAAAAGTGCCCTC...GAGCTCAGGAGGCCGCCTGAGGACTGCACACCGGGCCCACACCTCTCCTGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CAA 90 bp CCGGAGGGCCTTAACCAAGAAGTATCTTGTTTAGGGGCTGGGGACAGGGTGGGGGACACGACGCTAGGCTaGTCAGGGCCCTCTGCACCT +
Preference number: 5 (lower is better)
Translates to: PEGLNQEVSCLGAGDRVGDTTLG*SGPSAP
Trigger: AGGTGCAGAGGGCCCTGACAAGCCTAGCGTCGTGTC...CCCCACCCTGTCCCCAGCCCCTAAACAAGATACTTCTTGGTTAAGGCCCTCCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CAA 90 bp ATGAGGCACATGCCCCGTAGCCTTTCCCTTCCGGAGGGCCTTAACCAAGAAGTACAGTGGGGGCCGTGTTaGAGGCCCAGCCCGACTCAC +
Preference number: 5 (lower is better)
Translates to: MRHMPRSLSLPEGLNQEVQWGPC*RPSPTH
Trigger: GTGAGTCGGGCTGGGCCTCAAACACGGCCCCCACTG...TACTTCTTGGTTAAGGCCCTCCGGAAGGGAAAGGCTACGGGGCATGTGCCTCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647861.1
CDS-3UTR CAA 90 bp CCGGAGGGCCTTAACCAAGAAGTATCTTGTTTAGGGGCTGGGGACAGGGTGGGGGGGGTAGGAGTTCCCTaGCCCCTGTCAGGGACATCT +
Preference number: 5 (lower is better)
Translates to: PEGLNQEVSCLGAGDRVGGVGVP*PLSGTS
Trigger: AGATGTCCCTGACAGGGGCAAGGGAACTCCTACCCC...CCCCACCCTGTCCCCAGCCCCTAAACAAGATACTTCTTGGTTAAGGCCCTCCGG
60% GC, longest homopolymer 8 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CAA 90 bp CCGGAGGGCCTTAACCAAGAAGTATCTTGTTTAGGGGCTGGGGACAGGGTGGGGAAATTGGGCAGGGACTaGGAGGAGGTGTGCCCCGTG +
Preference number: 5 (lower is better)
Translates to: PEGLNQEVSCLGAGDRVGKLGRD*EEVCPV
Trigger: CACGGGGCACACCTCCTCCAAGTCCCTGCCCAATTT...CCCCACCCTGTCCCCAGCCCCTAAACAAGATACTTCTTGGTTAAGGCCCTCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CAA 90 bp ATGCCCCGTAGCCTTTCCCTTCCGGAGGGCCTTAACCAAGAAGTATCTTGTTTACGCCCGCGCTCCTTGTaGTGGCCCCACACGCACTGC +
Preference number: 5 (lower is better)
Translates to: MPRSLSLPEGLNQEVSCLRPRSL*WPHTHC
Trigger: GCAGTGCGTGTGGGGCCACAACAAGGAGCGCGGGCG...TAAACAAGATACTTCTTGGTTAAGGCCCTCCGGAAGGGAAAGGCTACGGGGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CAA 90 bp CCACAGGTTGGACAGGTTTTTATTGGAGAGTCAGGAGTTACTTTCCTTCCCTCGCGGCGCCCGCGCTCCTaGTTGTGGCCCCACACGCAC +
Preference number: 5 (lower is better)
Translates to: PQVGQVFIGESGVTFLPSRRPRS*LWPHTH
Trigger: GTGCGTGTGGGGCCACAACAAGGAGCGCGGGCGCCG...CGAGGGAAGGAAAGTAACTCCTGACTCTCCAATAAAAACCTGTCCAACCTGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373674.4
ENST00000611814.4
CDS-3UTR CAA 90 bp ATGAGGCACATGCCCCGTAGCCTTTCCCTTCCGGAGGGCCTTAACCAAGAAGTAGTAGCCAGAGGGACATaGGGAGCACGGAGTCCCCTC +
Preference number: 5 (lower is better)
Translates to: MRHMPRSLSLPEGLNQEVVARGT*GARSPL
Trigger: GAGGGGACTCCGTGCTCCCAATGTCCCTCTGGCTAC...TACTTCTTGGTTAAGGCCCTCCGGAAGGGAAAGGCTACGGGGCATGTGCCTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CAA 90 bp CTTCCGGAGGGCCTTAACCAAGAAGTATCTTGTTTAGGGGCTGGGGACAGGGTGACAGCAGGCAGAGCCTaGGTTGCCAGGGAGCCTGAG +
Preference number: 5 (lower is better)
Translates to: LPEGLNQEVSCLGAGDRVTAGRA*VAREPE
Trigger: CTCAGGCTCCCTGGCAACCAAGGCTCTGCCTGCTGT...CACCCTGTCCCCAGCCCCTAAACAAGATACTTCTTGGTTAAGGCCCTCCGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CAA 90 bp CCGGAGGGCCTTAACCAAGAAGTATCTTGTTTAGGGGCTGGGGACAGGGTGGGGAGGGCGGGTCTTTCGTaGCTAAGGAAGTTGGGGCCT +
Preference number: 5 (lower is better)
Translates to: PEGLNQEVSCLGAGDRVGRAGLS*LRKLGP
Trigger: AGGCCCCAACTTCCTTAGCAACGAAAGACCCGCCCT...CCCCACCCTGTCCCCAGCCCCTAAACAAGATACTTCTTGGTTAAGGCCCTCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS TCA 90 bp GGTAGAGGTTGTGCAGCTCCACCATCAAACGTTTCTCCTCATCTGTaGGGGCTCCAACGGGGCCTGTGGTGGCCACCAGCAGTAGCAGTA +
Preference number: 5 (lower is better)
Translates to: GRGCAAPPSNVSPHL*GLQRGLWWPPAVAV
Trigger: TACTGCTACTGCTGGTGGCCACCACAGGCCCCGTTGGAGCCCTCACAGATGAGGAGAAACGTTTGATGGTGGAGCTGCACAACCTCTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS GCA 90 bp GGGGAAGGTAACTGGCTCCTCATCCAAGGAGGGCAGGCTGTGAGCTaGCAAAATGGAAGGGACCTCAGTTGTTACGCAAGGTGGAGCCTC +
Preference number: 5 (lower is better)
Translates to: GEGNWLLIQGGQAVS*QNGRDLSCYARWSL
Trigger: GAGGCTCCACCTTGCGTAACAACTGAGGTCCCTTCCATTTTGGCAGCTCACAGCCTGCCCTCCTTGGATGAGGAGCCAGTTACCTTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS GCA 90 bp TGTCTCAGGGAGGGCTGGGCGCTTTGGGTCCCGACCAGCATCAAGTaGACTCCCCTTGGAGTCCTTGGCAAAAACCTCCTTTCTCTTGGT +
Preference number: 5 (lower is better)
Translates to: CLREGWALWVPTSIK*TPLGVLGKNLLSLG
Trigger: ACCAAGAGAAAGGAGGTTTTTGCCAAGGACTCCAAGGGGAGTGCACTTGATGCTGGTCGGGACCCAAAGCGCCCAGCCCTCCCTGAGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647861.1
CDS-3UTR CAA 90 bp CCACAGGTTGGACAGGTTTTTATTGGAGAGTCAGGAGTTACTTTCCTTCCCTCGCGCCCGCGCTCCTTGTaGTGGCCCCACACGCACTGC +
Preference number: 5 (lower is better)
Translates to: PQVGQVFIGESGVTFLPSRPRSL*WPHTHC
Trigger: GCAGTGCGTGTGGGGCCACAACAAGGAGCGCGGGCG...CGAGGGAAGGAAAGTAACTCCTGACTCTCCAATAAAAACCTGTCCAACCTGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373674.4
ENST00000611814.4
CDS-3UTR CAA 90 bp ATGAGGCACATGCCCCGTAGCCTTTCCCTTCCGGAGGGCCTTAACCAAGAAGTACCGATCCTCTCTGTCTaGGCCCATACCACCTGCGTG +
Preference number: 5 (lower is better)
Translates to: MRHMPRSLSLPEGLNQEVPILSV*AHTTCV
Trigger: CACGCAGGTGGTATGGGCCAAGACAGAGAGGATCGG...TACTTCTTGGTTAAGGCCCTCCGGAAGGGAAAGGCTACGGGGCATGTGCCTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CAA 90 bp CCGGAGGGCCTTAACCAAGAAGTATCTTGTTTAGGGGCTGGGGACAGGGTGGGGAAGCCGGAATCCCCGTaGCTAGGGAAGAAGGAGTAC +
Preference number: 5 (lower is better)
Translates to: PEGLNQEVSCLGAGDRVGKPESP*LGKKEY
Trigger: GTACTCCTTCTTCCCTAGCAACGGGGATTCCGGCTT...CCCCACCCTGTCCCCAGCCCCTAAACAAGATACTTCTTGGTTAAGGCCCTCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CAA 90 bp CCGGAGGGCCTTAACCAAGAAGTATCTTGTTTAGGGGCTGGGGACAGGGTGGGGTCGTTGCTAAGGAAGTaGGGGCCTGGGTTTCCACAG +
Preference number: 5 (lower is better)
Translates to: PEGLNQEVSCLGAGDRVGSLLRK*GPGFPQ
Trigger: CTGTGGAAACCCAGGCCCCAACTTCCTTAGCAACGA...CCCCACCCTGTCCCCAGCCCCTAAACAAGATACTTCTTGGTTAAGGCCCTCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CAA 90 bp ATGAGGCACATGCCCCGTAGCCTTTCCCTTCCGGAGGGCCTTAACCAAGAAGTAGGGGTAGGAGTTCCCTaGCCCCTGTCAGGGACATCT +
Preference number: 5 (lower is better)
Translates to: MRHMPRSLSLPEGLNQEVGVGVP*PLSGTS
Trigger: AGATGTCCCTGACAGGGGCAAGGGAACTCCTACCCC...TACTTCTTGGTTAAGGCCCTCCGGAAGGGAAAGGCTACGGGGCATGTGCCTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CAA 90 bp CCGGAGGGCCTTAACCAAGAAGTATCTTGTTTAGGGGCTGGGGACAGGGTGGGGGAGGTATTGGGGAAATaGGGCAGGGACTTGGAGGAG +
Preference number: 5 (lower is better)
Translates to: PEGLNQEVSCLGAGDRVGEVLGK*GRDLEE
Trigger: CTCCTCCAAGTCCCTGCCCAATTTCCCCAATACCTC...CCCCACCCTGTCCCCAGCCCCTAAACAAGATACTTCTTGGTTAAGGCCCTCCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS CCA 90 bp TGGAAGGGACCTCAGTTGTTACGCAAGGTGGAGCCTCTGTTGCCATaGAGGGCGGGTCTTTCGTTGCTAAGGAAGTTGGGGCCTGGGTTT +
Preference number: 5 (lower is better)
Translates to: WKGPQLLRKVEPLLP*RAGLSLLRKLGPGF
Trigger: AAACCCAGGCCCCAACTTCCTTAGCAACGAAAGACCCGCCCTCCATGGCAACAGAGGCTCCACCTTGCGTAACAACTGAGGTCCCTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CAA 90 bp CTTCCGGAGGGCCTTAACCAAGAAGTATCTTGTTTAGGGGCTGGGGACAGGGTGAGGGCGGGTCTTTCGTaGCTAAGGAAGTTGGGGCCT +
Preference number: 5 (lower is better)
Translates to: LPEGLNQEVSCLGAGDRVRAGLS*LRKLGP
Trigger: AGGCCCCAACTTCCTTAGCAACGAAAGACCCGCCCT...CACCCTGTCCCCAGCCCCTAAACAAGATACTTCTTGGTTAAGGCCCTCCGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CAA 90 bp ATGAGGCACATGCCCCGTAGCCTTTCCCTTCCGGAGGGCCTTAACCAAGAAGTAAGGGCGGGTCTTTCGTaGCTAAGGAAGTTGGGGCCT +
Preference number: 5 (lower is better)
Translates to: MRHMPRSLSLPEGLNQEVRAGLS*LRKLGP
Trigger: AGGCCCCAACTTCCTTAGCAACGAAAGACCCGCCCT...TACTTCTTGGTTAAGGCCCTCCGGAAGGGAAAGGCTACGGGGCATGTGCCTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CAA 90 bp CCGGAGGGCCTTAACCAAGAAGTATCTTGTTTAGGGGCTGGGGACAGGGTGGGGACCAGTAATTCGATGTaGGTCTCCTCAACACCCTGG +
Preference number: 5 (lower is better)
Translates to: PEGLNQEVSCLGAGDRVGTSNSM*VSSTPW
Trigger: CCAGGGTGTTGAGGAGACCAACATCGAATTACTGGT...CCCCACCCTGTCCCCAGCCCCTAAACAAGATACTTCTTGGTTAAGGCCCTCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CAA 90 bp ATGAGGCACATGCCCCGTAGCCTTTCCCTTCCGGAGGGCCTTAACCAAGAAGTAAAGCCGGAATCCCCGTaGCTAGGGAAGAAGGAGTAC +
Preference number: 5 (lower is better)
Translates to: MRHMPRSLSLPEGLNQEVKPESP*LGKKEY
Trigger: GTACTCCTTCTTCCCTAGCAACGGGGATTCCGGCTT...TACTTCTTGGTTAAGGCCCTCCGGAAGGGAAAGGCTACGGGGCATGTGCCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CAA 90 bp CTTCCGGAGGGCCTTAACCAAGAAGTATCTTGTTTAGGGGCTGGGGACAGGGTGGGAACATGGGTCGATTaGGGGAAGGTAACTGGCTCC +
Preference number: 5 (lower is better)
Translates to: LPEGLNQEVSCLGAGDRVGTWVD*GKVTGS
Trigger: GGAGCCAGTTACCTTCCCCAAATCGACCCATGTTCC...CACCCTGTCCCCAGCCCCTAAACAAGATACTTCTTGGTTAAGGCCCTCCGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CAA 90 bp ATGAGGCACATGCCCCGTAGCCTTTCCCTTCCGGAGGGCCTTAACCAAGAAGTACCTGTCAGGGACATCTaGGGGTCCAGAGAGTTCTCT +
Preference number: 5 (lower is better)
Translates to: MRHMPRSLSLPEGLNQEVPVRDI*GSREFS
Trigger: AGAGAACTCTCTGGACCCCAAGATGTCCCTGACAGG...TACTTCTTGGTTAAGGCCCTCCGGAAGGGAAAGGCTACGGGGCATGTGCCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CAA 90 bp CTTCCGGAGGGCCTTAACCAAGAAGTATCTTGTTTAGGGGCTGGGGACAGGGTGCCTGTCAGGGACATCTaGGGGTCCAGAGAGTTCTCT +
Preference number: 5 (lower is better)
Translates to: LPEGLNQEVSCLGAGDRVPVRDI*GSREFS
Trigger: AGAGAACTCTCTGGACCCCAAGATGTCCCTGACAGG...CACCCTGTCCCCAGCCCCTAAACAAGATACTTCTTGGTTAAGGCCCTCCGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CAA 90 bp ATGAGGCACATGCCCCGTAGCCTTTCCCTTCCGGAGGGCCTTAACCAAGAAGTAGAGGTATTGGGGAAATaGGGCAGGGACTTGGAGGAG +
Preference number: 5 (lower is better)
Translates to: MRHMPRSLSLPEGLNQEVEVLGK*GRDLEE
Trigger: CTCCTCCAAGTCCCTGCCCAATTTCCCCAATACCTC...TACTTCTTGGTTAAGGCCCTCCGGAAGGGAAAGGCTACGGGGCATGTGCCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CAA 90 bp ATGCCCCGTAGCCTTTCCCTTCCGGAGGGCCTTAACCAAGAAGTATCTTGTTTAGACACGACGCTAGGCTaGTCAGGGCCCTCTGCACCT +
Preference number: 5 (lower is better)
Translates to: MPRSLSLPEGLNQEVSCLDTTLG*SGPSAP
Trigger: AGGTGCAGAGGGCCCTGACAAGCCTAGCGTCGTGTC...TAAACAAGATACTTCTTGGTTAAGGCCCTCCGGAAGGGAAAGGCTACGGGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CAA 90 bp CTTCCGGAGGGCCTTAACCAAGAAGTATCTTGTTTAGGGGCTGGGGACAGGGTGAAAACCTCCTTTCTCTaGGTAACGGGGGCTCAGGCC +
Preference number: 5 (lower is better)
Translates to: LPEGLNQEVSCLGAGDRVKTSFL*VTGAQA
Trigger: GGCCTGAGCCCCCGTTACCAAGAGAAAGGAGGTTTT...CACCCTGTCCCCAGCCCCTAAACAAGATACTTCTTGGTTAAGGCCCTCCGGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000647861.1
CDS TCA 90 bp GATTTGGGGAAGGTAACTGGCTCCTCATCCAAGGAGGGCAGGCTGTaGGCTGCCAAAATGGAAGGGACCTCAGTTGTTACGCAAGGTGGA +
Preference number: 5 (lower is better)
Translates to: DLGKVTGSSSKEGRL*AAKMEGTSVVTQGG
Trigger: TCCACCTTGCGTAACAACTGAGGTCCCTTCCATTTTGGCAGCTCACAGCCTGCCCTCCTTGGATGAGGAGCCAGTTACCTTCCCCAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS CCA 90 bp AATTCGATGTTGGTCTCCTCAACACCCTGGAGCTTCTCACAGAAGTaGGAACCACAGCCGATCCTCTCTGTCTTGGCCCATACCACCTGC +
Preference number: 5 (lower is better)
Translates to: NSMLVSSTPWSFSQK*EPQPILSVLAHTTC
Trigger: GCAGGTGGTATGGGCCAAGACAGAGAGGATCGGCTGTGGTTCCCACTTCTGTGAGAAGCTCCAGGGTGTTGAGGAGACCAACATCGAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CAA 90 bp ATGCCCCGTAGCCTTTCCCTTCCGGAGGGCCTTAACCAAGAAGTATCTTGTTTACCGATCCTCTCTGTCTaGGCCCATACCACCTGCGTG +
Preference number: 5 (lower is better)
Translates to: MPRSLSLPEGLNQEVSCLPILSV*AHTTCV
Trigger: CACGCAGGTGGTATGGGCCAAGACAGAGAGGATCGG...TAAACAAGATACTTCTTGGTTAAGGCCCTCCGGAAGGGAAAGGCTACGGGGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CAA 90 bp CCACAGGTTGGACAGGTTTTTATTGGAGAGTCAGGAGTTACTTTCCTTCCCTCGACAGCAGGCAGAGCCTaGGTTGCCAGGGAGCCTGAG +
Preference number: 5 (lower is better)
Translates to: PQVGQVFIGESGVTFLPSTAGRA*VAREPE
Trigger: CTCAGGCTCCCTGGCAACCAAGGCTCTGCCTGCTGT...CGAGGGAAGGAAAGTAACTCCTGACTCTCCAATAAAAACCTGTCCAACCTGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373674.4
ENST00000611814.4
CDS-3UTR CAA 90 bp ATGCCCCGTAGCCTTTCCCTTCCGGAGGGCCTTAACCAAGAAGTATCTTGTTTAAAGGTGGAGCCTCTGTaGCCATGGAGGGCGGGTCTT +
Preference number: 5 (lower is better)
Translates to: MPRSLSLPEGLNQEVSCLKVEPL*PWRAGL
Trigger: AAGACCCGCCCTCCATGGCAACAGAGGCTCCACCTT...TAAACAAGATACTTCTTGGTTAAGGCCCTCCGGAAGGGAAAGGCTACGGGGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CAA 90 bp ATGCCCCGTAGCCTTTCCCTTCCGGAGGGCCTTAACCAAGAAGTATCTTGTTTAGGGGTAGGAGTTCCCTaGCCCCTGTCAGGGACATCT +
Preference number: 5 (lower is better)
Translates to: MPRSLSLPEGLNQEVSCLGVGVP*PLSGTS
Trigger: AGATGTCCCTGACAGGGGCAAGGGAACTCCTACCCC...TAAACAAGATACTTCTTGGTTAAGGCCCTCCGGAAGGGAAAGGCTACGGGGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CAA 90 bp ATGCCCCGTAGCCTTTCCCTTCCGGAGGGCCTTAACCAAGAAGTATCTTGTTTAAAATTGGGCAGGGACTaGGAGGAGGTGTGCCCCGTG +
Preference number: 5 (lower is better)
Translates to: MPRSLSLPEGLNQEVSCLKLGRD*EEVCPV
Trigger: CACGGGGCACACCTCCTCCAAGTCCCTGCCCAATTT...TAAACAAGATACTTCTTGGTTAAGGCCCTCCGGAAGGGAAAGGCTACGGGGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CAA 90 bp CTTCCGGAGGGCCTTAACCAAGAAGTATCTTGTTTAGGGGCTGGGGACAGGGTGTCAAGTGCACTCCCCTaGGAGTCCTTGGCAAAAACC +
Preference number: 5 (lower is better)
Translates to: LPEGLNQEVSCLGAGDRVSSALP*ESLAKT
Trigger: GGTTTTTGCCAAGGACTCCAAGGGGAGTGCACTTGA...CACCCTGTCCCCAGCCCCTAAACAAGATACTTCTTGGTTAAGGCCCTCCGGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000647861.1
CDS CCA 90 bp TCACGTTCCCCGGAGGCTCATAGTTGCACACCAGTAATTCGATGTTaGTCTCCTCAACACCCTGGAGCTTCTCACAGAAGTGGGAACCAC +
Preference number: 5 (lower is better)
Translates to: SRSPEAHSCTPVIRC*SPQHPGASHRSGNH
Trigger: GTGGTTCCCACTTCTGTGAGAAGCTCCAGGGTGTTGAGGAGACCAACATCGAATTACTGGTGTGCAACTATGAGCCTCCGGGGAACGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CAA 90 bp ATGCCCCGTAGCCTTTCCCTTCCGGAGGGCCTTAACCAAGAAGTATCTTGTTTACACTGGCACTACAGGTaGCCCTGGTGTGGTCATCTC +
Preference number: 5 (lower is better)
Translates to: MPRSLSLPEGLNQEVSCLHWHYR*PWCGHL
Trigger: GAGATGACCACACCAGGGCAACCTGTAGTGCCAGTG...TAAACAAGATACTTCTTGGTTAAGGCCCTCCGGAAGGGAAAGGCTACGGGGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CAA 90 bp CCACAGGTTGGACAGGTTTTTATTGGAGAGTCAGGAGTTACTTTCCTTCCCTCGTCGTTGCTAAGGAAGTaGGGGCCTGGGTTTCCACAG +
Preference number: 5 (lower is better)
Translates to: PQVGQVFIGESGVTFLPSSLLRK*GPGFPQ
Trigger: CTGTGGAAACCCAGGCCCCAACTTCCTTAGCAACGA...CGAGGGAAGGAAAGTAACTCCTGACTCTCCAATAAAAACCTGTCCAACCTGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373674.4
ENST00000611814.4
CDS-3UTR CAA 90 bp CCACAGGTTGGACAGGTTTTTATTGGAGAGTCAGGAGTTACTTTCCTTCCCTCGTGGAAGGGACCTCAGTaGTTACGCAAGGTGGAGCCT +
Preference number: 5 (lower is better)
Translates to: PQVGQVFIGESGVTFLPSWKGPQ*LRKVEP
Trigger: AGGCTCCACCTTGCGTAACAACTGAGGTCCCTTCCA...CGAGGGAAGGAAAGTAACTCCTGACTCTCCAATAAAAACCTGTCCAACCTGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373674.4
ENST00000611814.4
CDS-3UTR CAA 90 bp CCACAGGTTGGACAGGTTTTTATTGGAGAGTCAGGAGTTACTTTCCTTCCCTCGGGAACATGGGTCGATTaGGGGAAGGTAACTGGCTCC +
Preference number: 5 (lower is better)
Translates to: PQVGQVFIGESGVTFLPSGTWVD*GKVTGS
Trigger: GGAGCCAGTTACCTTCCCCAAATCGACCCATGTTCC...CGAGGGAAGGAAAGTAACTCCTGACTCTCCAATAAAAACCTGTCCAACCTGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373674.4
ENST00000611814.4
CDS-3UTR CAA 90 bp CCGGAGGGCCTTAACCAAGAAGTATCTTGTTTAGGGGCTGGGGACAGGGTGGGGGTTTTGTCTGTCACTTaGTCTGCTGATTTTGGGATA +
Preference number: 5 (lower is better)
Translates to: PEGLNQEVSCLGAGDRVGVLSVT*SADFGI
Trigger: TATCCCAAAATCAGCAGACAAAGTGACAGACAAAAC...CCCCACCCTGTCCCCAGCCCCTAAACAAGATACTTCTTGGTTAAGGCCCTCCGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CAA 90 bp CTTCCGGAGGGCCTTAACCAAGAAGTATCTTGTTTAGGGGCTGGGGACAGGGTGGAGGGCACTTTTGTTTaGTCTGTCACTTTGTCTGCT +
Preference number: 5 (lower is better)
Translates to: LPEGLNQEVSCLGAGDRVEGTFV*SVTLSA
Trigger: AGCAGACAAAGTGACAGACAAAACAAAAGTGCCCTC...CACCCTGTCCCCAGCCCCTAAACAAGATACTTCTTGGTTAAGGCCCTCCGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CAA 90 bp ATGAGGCACATGCCCCGTAGCCTTTCCCTTCCGGAGGGCCTTAACCAAGAAGTAGAGGGCACTTTTGTTTaGTCTGTCACTTTGTCTGCT +
Preference number: 5 (lower is better)
Translates to: MRHMPRSLSLPEGLNQEVEGTFV*SVTLSA
Trigger: AGCAGACAAAGTGACAGACAAAACAAAAGTGCCCTC...TACTTCTTGGTTAAGGCCCTCCGGAAGGGAAAGGCTACGGGGCATGTGCCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CAA 90 bp CCACAGGTTGGACAGGTTTTTATTGGAGAGTCAGGAGTTACTTTCCTTCCCTCGGAGGTATTGGGGAAATaGGGCAGGGACTTGGAGGAG +
Preference number: 5 (lower is better)
Translates to: PQVGQVFIGESGVTFLPSEVLGK*GRDLEE
Trigger: CTCCTCCAAGTCCCTGCCCAATTTCCCCAATACCTC...CGAGGGAAGGAAAGTAACTCCTGACTCTCCAATAAAAACCTGTCCAACCTGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373674.4
ENST00000611814.4
CDS-3UTR CAA 90 bp CCGGAGGGCCTTAACCAAGAAGTATCTTGTTTAGGGGCTGGGGACAGGGTGGGGTTGGACAGGTTTTTATaGGAGAGTCAGGAGTTACTT +
Preference number: 5 (lower is better)
Translates to: PEGLNQEVSCLGAGDRVGLDRFL*ESQELL
Trigger: AAGTAACTCCTGACTCTCCAATAAAAACCTGTCCAA...CCCCACCCTGTCCCCAGCCCCTAAACAAGATACTTCTTGGTTAAGGCCCTCCGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000373674.4
ENST00000611814.4
CDS-3UTR CAA 90 bp ATGAGGCACATGCCCCGTAGCCTTTCCCTTCCGGAGGGCCTTAACCAAGAAGTAGTTTTGTCTGTCACTTaGTCTGCTGATTTTGGGATA +
Preference number: 5 (lower is better)
Translates to: MRHMPRSLSLPEGLNQEVVLSVT*SADFGI
Trigger: TATCCCAAAATCAGCAGACAAAGTGACAGACAAAAC...TACTTCTTGGTTAAGGCCCTCCGGAAGGGAAAGGCTACGGGGCATGTGCCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS-3UTR CAA 90 bp ATGCCCCGTAGCCTTTCCCTTCCGGAGGGCCTTAACCAAGAAGTATCTTGTTTATTGGACAGGTTTTTATaGGAGAGTCAGGAGTTACTT +
Preference number: 5 (lower is better)
Translates to: MPRSLSLPEGLNQEVSCLLDRFL*ESQELL
Trigger: AAGTAACTCCTGACTCTCCAATAAAAACCTGTCCAA...TAAACAAGATACTTCTTGGTTAAGGCCCTCCGGAAGGGAAAGGCTACGGGGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373674.4
ENST00000611814.4
CDS TCA 72 bp CCTCCATGGCCAGCGGCACGTCCATGCCCTCGTCTGTaGTGGCGAACAGATTCTCGCCGCGGCGCCCGCGCT +
Preference number: 6 (lower is better)
Translates to: PPWPAARPCPRL*WRTDSRRGARA
Trigger: AGCGCGGGCGCCGCGGCGAGAATCTGTTCGCCATCACAGACGAGGGCATGGACGTGCCGCTGGCCATGGAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS TCA 72 bp AGGGCCCCACACATGACCAGGGCCCGAGTTCAGCCCTaGCACGACGCTAGGCTTGTCAGGGCCCTCTGCACC +
Preference number: 6 (lower is better)
Translates to: RAPHMTRARVQP*HDARLVRALCT
Trigger: GGTGCAGAGGGCCCTGACAAGCCTAGCGTCGTGTCAGGGCTGAACTCGGGCCCTGGTCATGTGTGGGGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373674.4
ENST00000491324.1
ENST00000611814.4
ENST00000647861.1
CDS CCA 72 bp TGTTGTGGCCCCACACGCACTGCCGTGCGTAGGCCTTaGCGAAGGCGGCCAGCTCCTCGTCCCATCTCATGT +
Preference number: 6 (lower is better)
Translates to: CCGPTRTAVRRP*RRRPAPRPISC
Trigger: ACATGAGATGGGACGAGGAGCTGGCCGCCTTCGCCAAGGCCTACGCACGGCAGTGCGTGTGGGGCCACAACA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS CAA 90 bp AGAGCCAGGGCACGCCCACCCGTGGCATTAGCGGTGGCAGAGGTATaGGGGAAATTGGGCAGGGACTTGGAGGAGGTGTGCCCCGTGTGG +
Preference number: 6 (lower is better)
Translates to: RARARPPVALAVAEV*GKLGRDLEEVCPVW
Trigger: CCACACGGGGCACACCTCCTCCAAGTCCCTGCCCAATTTCCCCAATACCTCTGCCACCGCTAATGCCACGGGTGGGCGTGCCCTGGCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS CCA 72 bp GGCCCAGCCCGACTCACACAATGTCTCAGGGAGGGCTaGGCGCTTTGGGTCCCGACCAGCATCAAGTGCACT +
Preference number: 6 (lower is better)
Translates to: GPARLTQCLREG*ALWVPTSIKCT
Trigger: AGTGCACTTGATGCTGGTCGGGACCCAAAGCGCCCAGCCCTCCCTGAGACATTGTGTGAGTCGGGCTGGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647861.1
CDS CAA 90 bp GCACGCCCACCCGTGGCATTAGCGGTGGCAGAGGTATTGGGGAAATaGGGCAGGGACTTGGAGGAGGTGTGCCCCGTGTGGTCCAGTGTG +
Preference number: 6 (lower is better)
Translates to: ARPPVALAVAEVLGK*GRDLEEVCPVWSSV
Trigger: CACACTGGACCACACGGGGCACACCTCCTCCAAGTCCCTGCCCAATTTCCCCAATACCTCTGCCACCGCTAATGCCACGGGTGGGCGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS CAA 90 bp AGGCCCAGCCCGACTCACACAATGTCTCAGGGAGGGCTGGGCGCTTaGGGTCCCGACCAGCATCAAGTGCACTCCCCTTGGAGTCCTTGG +
Preference number: 6 (lower is better)
Translates to: RPSPTHTMSQGGLGA*GPDQHQVHSPWSPW
Trigger: CCAAGGACTCCAAGGGGAGTGCACTTGATGCTGGTCGGGACCCAAAGCGCCCAGCCCTCCCTGAGACATTGTGTGAGTCGGGCTGGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647861.1
CDS GCA 72 bp AGCGGCAGCAGAAGCATCAGGAAACTGCAGGAGCCGTaGATGGTGGCCAGCCGTCTCTCCTTCTCCCGTCCA +
Preference number: 6 (lower is better)
Translates to: SGSRSIRKLQEP*MVASRLSFSRP
Trigger: TGGACGGGAGAAGGAGAGACGGCTGGCCACCATGCACGGCTCCTGCAGTTTCCTGATGCTTCTGCTGCCGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611814.4
ENST00000647861.1
CDS CCA 72 bp AAATTGGGCAGGGACTTGGAGGAGGTGTGCCCCGTGTaGTCCAGTGTGGCCTGCAGCTCACCTGGCTTGTCC +
Preference number: 6 (lower is better)
Translates to: KLGRDLEEVCPV*SSVACSSPGLS
Trigger: GGACAAGCCAGGTGAGCTGCAGGCCACACTGGACCACACGGGGCACACCTCCTCCAAGTCCCTGCCCAATTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS CCA 72 bp CCGGGTGGAACCAGGCACTGGCACTACAGGTTGCCCTaGTGTGGTCATCTCTGTGGCCTCTGCCTCCAGTCA +
Preference number: 6 (lower is better)
Translates to: PGGTRHWHYRLP*CGHLCGLCLQS
Trigger: TGACTGGAGGCAGAGGCCACAGAGATGACCACACCAGGGCAACCTGTAGTGCCAGTGCCTGGTTCCACCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611814.4
ENST00000647861.1
CDS CCA 72 bp GCAGAAGCATCAGGAAACTGCAGGAGCCGTGCATGGTaGCCAGCCGTCTCTCCTTCTCCCGTCCAGGGGTCT +
Preference number: 6 (lower is better)
Translates to: AEASGNCRSRAW*PAVSPSPVQGS
Trigger: AGACCCCTGGACGGGAGAAGGAGAGACGGCTGGCCACCATGCACGGCTCCTGCAGTTTCCTGATGCTTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611814.4
ENST00000647861.1
CDS CAA 72 bp CCCGTGGCATTAGCGGTGGCAGAGGTATTGGGGAAATaGGGCAGGGACTTGGAGGAGGTGTGCCCCGTGTGG +
Preference number: 6 (lower is better)
Translates to: PVALAVAEVLGK*GRDLEEVCPVW
Trigger: CCACACGGGGCACACCTCCTCCAAGTCCCTGCCCAATTTCCCCAATACCTCTGCCACCGCTAATGCCACGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS CAA 72 bp CCGACTCACACAATGTCTCAGGGAGGGCTGGGCGCTTaGGGTCCCGACCAGCATCAAGTGCACTCCCCTTGG +
Preference number: 6 (lower is better)
Translates to: PTHTMSQGGLGA*GPDQHQVHSPW
Trigger: CCAAGGGGAGTGCACTTGATGCTGGTCGGGACCCAAAGCGCCCAGCCCTCCCTGAGACATTGTGTGAGTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647861.1
CDS CAA 90 bp GAGCCTCTGTTGCCATGGAGGGCGGGTCTTTCGTTGCTAAGGAAGTaGGGGCCTGGGTTTCCACAGCAGGCAGAGCCTTGGTTGCCAGGG +
Preference number: 6 (lower is better)
Translates to: EPLLPWRAGLSLLRK*GPGFPQQAEPWLPG
Trigger: CCCTGGCAACCAAGGCTCTGCCTGCTGTGGAAACCCAGGCCCCAACTTCCTTAGCAACGAAAGACCCGCCCTCCATGGCAACAGAGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS GCA 72 bp GCAGTAGCAGTAGCGGCAGCAGAAGCATCAGGAAACTaGAGGAGCCGTGCATGGTGGCCAGCCGTCTCTCCT +
Preference number: 6 (lower is better)
Translates to: AVAVAAAEASGN*RSRAWWPAVSP
Trigger: AGGAGAGACGGCTGGCCACCATGCACGGCTCCTGCAGTTTCCTGATGCTTCTGCTGCCGCTACTGCTACTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS CCA 72 bp CGACTCACACAATGTCTCAGGGAGGGCTGGGCGCTTTaGGTCCCGACCAGCATCAAGTGCACTCCCCTTGGA +
Preference number: 6 (lower is better)
Translates to: RLTQCLREGWAL*VPTSIKCTPLG
Trigger: TCCAAGGGGAGTGCACTTGATGCTGGTCGGGACCCAAAGCGCCCAGCCCTCCCTGAGACATTGTGTGAGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647861.1
CDS CAA 72 bp CCAGGGCCCGAGTTCAGCCCTGACACGACGCTAGGCTaGTCAGGGCCCTCTGCACCCATTTTCCTAGAGTCT +
Preference number: 6 (lower is better)
Translates to: PGPEFSPDTTLG*SGPSAPIFLES
Trigger: AGACTCTAGGAAAATGGGTGCAGAGGGCCCTGACAAGCCTAGCGTCGTGTCAGGGCTGAACTCGGGCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491324.1
CDS CAA 90 bp GATGGGTTCACAGAGGGAGTTCTTGCAGTGGTAGCCAGAGGGACATaGGGAGCACGGAGTCCCCTCCTGGTAGGGCCGTTTCCCCTTCAC +
Preference number: 6 (lower is better)
Translates to: DGFTEGVLAVVARGT*GARSPLLVGPFPLH
Trigger: GTGAAGGGGAAACGGCCCTACCAGGAGGGGACTCCGTGCTCCCAATGTCCCTCTGGCTACCACTGCAAGAACTCCCTCTGTGAACCCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS GCA 72 bp CTTCCGGGCTTCCGATGGGTTCACAGAGGGAGTTCTTaGAGTGGTAGCCAGAGGGACATTGGGAGCACGGAG +
Preference number: 6 (lower is better)
Translates to: LPGFRWVHRGSS*SGSQRDIGSTE
Trigger: CTCCGTGCTCCCAATGTCCCTCTGGCTACCACTGCAAGAACTCCCTCTGTGAACCCATCGGAAGCCCGGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS GCA 72 bp TGCTGGACTCAGGAATGGAAGGACACAGTTCTCAGATaGCCCCCGGGTGGAACCAGGCACTGGCACTACAGG +
Preference number: 6 (lower is better)
Translates to: CWTQEWKDTVLR*PPGGTRHWHYR
Trigger: CCTGTAGTGCCAGTGCCTGGTTCCACCCGGGGGGCATCTGAGAACTGTGTCCTTCCATTCCTGAGTCCAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611814.4
ENST00000647861.1
CDS CCA 72 bp GTGGCCAGCCGTCTCTCCTTCTCCCGTCCAGGGGTCTaGCAGCTGGATTTAAAGTCCTTCCCACACAAGCAC +
Preference number: 6 (lower is better)
Translates to: VASRLSFSRPGV*QLDLKSFPHKH
Trigger: GTGCTTGTGTGGGAAGGACTTTAAATCCAGCTGCCAGACCCCTGGACGGGAGAAGGAGAGACGGCTGGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611814.4
ENST00000647861.1
CDS CAA 72 bp ACAGAGGGAGTTCTTGCAGTGGTAGCCAGAGGGACATaGGGAGCACGGAGTCCCCTCCTGGTAGGGCCGTTT +
Preference number: 6 (lower is better)
Translates to: TEGVLAVVARGT*GARSPLLVGPF
Trigger: AAACGGCCCTACCAGGAGGGGACTCCGTGCTCCCAATGTCCCTCTGGCTACCACTGCAAGAACTCCCTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS CAA 72 bp GTGGAGCCTCTGTTGCCATGGAGGGCGGGTCTTTCGTaGCTAAGGAAGTTGGGGCCTGGGTTTCCACAGCAG +
Preference number: 6 (lower is better)
Translates to: VEPLLPWRAGLS*LRKLGPGFPQQ
Trigger: CTGCTGTGGAAACCCAGGCCCCAACTTCCTTAGCAACGAAAGACCCGCCCTCCATGGCAACAGAGGCTCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS CAA 90 bp TTACGCAAGGTGGAGCCTCTGTTGCCATGGAGGGCGGGTCTTTCGTaGCTAAGGAAGTTGGGGCCTGGGTTTCCACAGCAGGCAGAGCCT +
Preference number: 6 (lower is better)
Translates to: LRKVEPLLPWRAGLS*LRKLGPGFPQQAEP
Trigger: AGGCTCTGCCTGCTGTGGAAACCCAGGCCCCAACTTCCTTAGCAACGAAAGACCCGCCCTCCATGGCAACAGAGGCTCCACCTTGCGTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS CAA 90 bp CCAAGGAGGGCAGGCTGTGAGCTGCCAAAATGGAAGGGACCTCAGTaGTTACGCAAGGTGGAGCCTCTGTTGCCATGGAGGGCGGGTCTT +
Preference number: 6 (lower is better)
Translates to: PRRAGCELPKWKGPQ*LRKVEPLLPWRAGL
Trigger: AAGACCCGCCCTCCATGGCAACAGAGGCTCCACCTTGCGTAACAACTGAGGTCCCTTCCATTTTGGCAGCTCACAGCCTGCCCTCCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS CAA 90 bp GTTGCTAAGGAAGTTGGGGCCTGGGTTTCCACAGCAGGCAGAGCCTaGGTTGCCAGGGAGCCTGAGACCTCTGTTACCAAGAAAGCCGGA +
Preference number: 6 (lower is better)
Translates to: VAKEVGAWVSTAGRA*VAREPETSVTKKAG
Trigger: TCCGGCTTTCTTGGTAACAGAGGTCTCAGGCTCCCTGGCAACCAAGGCTCTGCCTGCTGTGGAAACCCAGGCCCCAACTTCCTTAGCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS TCA 72 bp CTGCAGCTCACCTGGCTTGTCCTGGGCTGGAAAAACTaGGGCCAAGACCTCACTGGAAGGAGGCAACTCAGC +
Preference number: 6 (lower is better)
Translates to: LQLTWLVLGWKN*GQDLTGRRQLS
Trigger: GCTGAGTTGCCTCCTTCCAGTGAGGTCTTGGCCTCAGTTTTTCCAGCCCAGGACAAGCCAGGTGAGCTGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS CAA 72 bp GCAGGCTGTGAGCTGCCAAAATGGAAGGGACCTCAGTaGTTACGCAAGGTGGAGCCTCTGTTGCCATGGAGG +
Preference number: 6 (lower is better)
Translates to: AGCELPKWKGPQ*LRKVEPLLPWR
Trigger: CCTCCATGGCAACAGAGGCTCCACCTTGCGTAACAACTGAGGTCCCTTCCATTTTGGCAGCTCACAGCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS CAA 90 bp CCAAAATGGAAGGGACCTCAGTTGTTACGCAAGGTGGAGCCTCTGTaGCCATGGAGGGCGGGTCTTTCGTTGCTAAGGAAGTTGGGGCCT +
Preference number: 6 (lower is better)
Translates to: PKWKGPQLLRKVEPL*PWRAGLSLLRKLGP
Trigger: AGGCCCCAACTTCCTTAGCAACGAAAGACCCGCCCTCCATGGCAACAGAGGCTCCACCTTGCGTAACAACTGAGGTCCCTTCCATTTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS CAA 72 bp AAGGGACCTCAGTTGTTACGCAAGGTGGAGCCTCTGTaGCCATGGAGGGCGGGTCTTTCGTTGCTAAGGAAG +
Preference number: 6 (lower is better)
Translates to: KGPQLLRKVEPL*PWRAGLSLLRK
Trigger: CTTCCTTAGCAACGAAAGACCCGCCCTCCATGGCAACAGAGGCTCCACCTTGCGTAACAACTGAGGTCCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS GCA 72 bp GCCGTTTCCCCTTCACGTTCCCCGGAGGCTCATAGTTaGACACCAGTAATTCGATGTTGGTCTCCTCAACAC +
Preference number: 6 (lower is better)
Translates to: AVSPSRSPEAHS*TPVIRCWSPQH
Trigger: GTGTTGAGGAGACCAACATCGAATTACTGGTGTGCAACTATGAGCCTCCGGGGAACGTGAAGGGGAAACGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS CAA 72 bp CGCTTTGGGTCCCGACCAGCATCAAGTGCACTCCCCTaGGAGTCCTTGGCAAAAACCTCCTTTCTCTTGGTA +
Preference number: 6 (lower is better)
Translates to: RFGSRPASSALP*ESLAKTSFLLV
Trigger: TACCAAGAGAAAGGAGGTTTTTGCCAAGGACTCCAAGGGGAGTGCACTTGATGCTGGTCGGGACCCAAAGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647861.1
CDS CCA 72 bp CACACCAGTAATTCGATGTTGGTCTCCTCAACACCCTaGAGCTTCTCACAGAAGTGGGAACCACAGCCGATC +
Preference number: 6 (lower is better)
Translates to: HTSNSMLVSSTP*SFSQKWEPQPI
Trigger: GATCGGCTGTGGTTCCCACTTCTGTGAGAAGCTCCAGGGTGTTGAGGAGACCAACATCGAATTACTGGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS CCA 72 bp CCGGAGGCTCATAGTTGCACACCAGTAATTCGATGTTaGTCTCCTCAACACCCTGGAGCTTCTCACAGAAGT +
Preference number: 6 (lower is better)
Translates to: PEAHSCTPVIRC*SPQHPGASHRS
Trigger: ACTTCTGTGAGAAGCTCCAGGGTGTTGAGGAGACCAACATCGAATTACTGGTGTGCAACTATGAGCCTCCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS CAA 72 bp TTGTCTGCTGATTTTGGGATAGGAACATGGGTCGATTaGGGGAAGGTAACTGGCTCCTCATCCAAGGAGGGC +
Preference number: 6 (lower is better)
Translates to: LSADFGIGTWVD*GKVTGSSSKEG
Trigger: GCCCTCCTTGGATGAGGAGCCAGTTACCTTCCCCAAATCGACCCATGTTCCTATCCCAAAATCAGCAGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1
CDS CAA 72 bp AGAGAGTTCTCTGGGCTCCTAGAGGGCACTTTTGTTTaGTCTGTCACTTTGTCTGCTGATTTTGGGATAGGA +
Preference number: 6 (lower is better)
Translates to: REFSGLLEGTFV*SVTLSADFGIG
Trigger: TCCTATCCCAAAATCAGCAGACAAAGTGACAGACAAAACAAAAGTGCCCTCTAGGAGCCCAGAGAACTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373674.4
ENST00000611814.4
ENST00000647861.1